BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047960
(371 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225459354|ref|XP_002284214.1| PREDICTED: uncharacterized ATP-dependent helicase C29A10.10c-like
[Vitis vinifera]
Length = 1375
Score = 537 bits (1384), Expect = e-150, Method: Compositional matrix adjust.
Identities = 252/314 (80%), Positives = 279/314 (88%), Gaps = 8/314 (2%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
MLLSVQYRMHPHIRDFPSR+FYQGRLTDSESV NLPDE YYKDP+LRPYVF+D+ HGRES
Sbjct: 1058 MLLSVQYRMHPHIRDFPSRYFYQGRLTDSESVTNLPDEAYYKDPLLRPYVFYDITHGRES 1117
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
HRGGSVSYQN+ EA+ + LYEHLQKTLKS+G+GK++VGIITPYKLQLKCLQ EF +VL+
Sbjct: 1118 HRGGSVSYQNIHEAQICLRLYEHLQKTLKSLGMGKISVGIITPYKLQLKCLQREFDDVLS 1177
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGN 180
SEEGKDLYINTVDAFQGQERDVIIMSCVRAS+HGVGFVADIRRMNVALTRARRALWVMGN
Sbjct: 1178 SEEGKDLYINTVDAFQGQERDVIIMSCVRASSHGVGFVADIRRMNVALTRARRALWVMGN 1237
Query: 181 AGALTQSDDWAALIADSKARNCYMDMDSLPKEFSVALAAKAPGYGPLQGKIPHNARGLRS 240
A AL QSDDWAALI+D++AR+CY+DMDSLPKEF L K P YGPL GK+ N RGLRS
Sbjct: 1238 ANALMQSDDWAALISDARARSCYLDMDSLPKEF---LVPKGPTYGPLSGKVSSNMRGLRS 1294
Query: 241 AGQRHRSFDMNMESRSGTPSEDDEK-----VSRNGNYRPFKPPLENSLDDFDQSGEKYRD 295
AG RHR DM++ES+SGTPSEDDEK +SRNGNYRP KP +ENSLDDFDQS +K RD
Sbjct: 1295 AGPRHRQLDMHVESKSGTPSEDDEKSNASLISRNGNYRPLKPTMENSLDDFDQSADKSRD 1354
Query: 296 AWQHGIQKKQSSGG 309
AWQ+GIQKKQSS G
Sbjct: 1355 AWQYGIQKKQSSAG 1368
>gi|147779903|emb|CAN65841.1| hypothetical protein VITISV_009619 [Vitis vinifera]
Length = 1408
Score = 537 bits (1384), Expect = e-150, Method: Compositional matrix adjust.
Identities = 252/314 (80%), Positives = 279/314 (88%), Gaps = 8/314 (2%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
MLLSVQYRMHPHIRDFPSR+FYQGRLTDSESV NLPDE YYKDP+LRPYVF+D+ HGRES
Sbjct: 1091 MLLSVQYRMHPHIRDFPSRYFYQGRLTDSESVTNLPDEAYYKDPLLRPYVFYDITHGRES 1150
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
HRGGSVSYQN+ EA+ + LYEHLQKTLKS+G+GK++VGIITPYKLQLKCLQ EF +VL+
Sbjct: 1151 HRGGSVSYQNIHEAQICLRLYEHLQKTLKSLGMGKISVGIITPYKLQLKCLQREFDDVLS 1210
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGN 180
SEEGKDLYINTVDAFQGQERDVIIMSCVRAS+HGVGFVADIRRMNVALTRARRALWVMGN
Sbjct: 1211 SEEGKDLYINTVDAFQGQERDVIIMSCVRASSHGVGFVADIRRMNVALTRARRALWVMGN 1270
Query: 181 AGALTQSDDWAALIADSKARNCYMDMDSLPKEFSVALAAKAPGYGPLQGKIPHNARGLRS 240
A AL QSDDWAALI+D++AR+CY+DMDSLPKEF L K P YGPL GK+ N RGLRS
Sbjct: 1271 ANALMQSDDWAALISDARARSCYLDMDSLPKEF---LVPKGPTYGPLSGKVSSNMRGLRS 1327
Query: 241 AGQRHRSFDMNMESRSGTPSEDDEK-----VSRNGNYRPFKPPLENSLDDFDQSGEKYRD 295
AG RHR DM++ES+SGTPSEDDEK +SRNGNYRP KP +ENSLDDFDQS +K RD
Sbjct: 1328 AGPRHRQLDMHVESKSGTPSEDDEKSNASLISRNGNYRPLKPTMENSLDDFDQSADKSRD 1387
Query: 296 AWQHGIQKKQSSGG 309
AWQ+GIQKKQSS G
Sbjct: 1388 AWQYGIQKKQSSAG 1401
>gi|255545656|ref|XP_002513888.1| splicing endonuclease positive effector sen1, putative [Ricinus
communis]
gi|223546974|gb|EEF48471.1| splicing endonuclease positive effector sen1, putative [Ricinus
communis]
Length = 1352
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 242/314 (77%), Positives = 270/314 (85%), Gaps = 13/314 (4%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
MLLSVQYRMHP IRDFPSRHFYQ RLTDSESV+NLPDE+YYKDP+LRPY+F+DV +GRES
Sbjct: 1040 MLLSVQYRMHPQIRDFPSRHFYQSRLTDSESVVNLPDEMYYKDPLLRPYLFYDVTYGRES 1099
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
HRGGSVS+QNV EA+F LYEHLQKTLKS+GLG+++VGIITPYKLQLKCLQHEF +L
Sbjct: 1100 HRGGSVSFQNVHEAQFCFQLYEHLQKTLKSLGLGRISVGIITPYKLQLKCLQHEFAAILK 1159
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGN 180
SEEGKD+YINTVDAFQGQERDVIIMSCVRASNH VGFVADIRRMNVALTRARRALWVMGN
Sbjct: 1160 SEEGKDIYINTVDAFQGQERDVIIMSCVRASNHSVGFVADIRRMNVALTRARRALWVMGN 1219
Query: 181 AGALTQSDDWAALIADSKARNCYMDMDSLPKEFSVALAAKAPGYGPLQGKIPHNARGLRS 240
A +L +SDDWAALI D+KARNCYMDM+SLPKEF V+ QGK N RG R
Sbjct: 1220 ANSLVKSDDWAALIDDAKARNCYMDMESLPKEFFVSKGN--------QGKGSSNTRGSRL 1271
Query: 241 AGQRHRSFDMNMESRSGTPSEDDEK-----VSRNGNYRPFKPPLENSLDDFDQSGEKYRD 295
G RHRS D++ME+RSGTPSEDD+ +SRNGNYRPFKP ++NSLDDFDQSG+K RD
Sbjct: 1272 GGPRHRSMDLHMEARSGTPSEDDDSSGAPVISRNGNYRPFKPLMDNSLDDFDQSGDKSRD 1331
Query: 296 AWQHGIQKKQSSGG 309
AWQ+GIQKKQSS G
Sbjct: 1332 AWQYGIQKKQSSSG 1345
>gi|224082154|ref|XP_002306584.1| predicted protein [Populus trichocarpa]
gi|222856033|gb|EEE93580.1| predicted protein [Populus trichocarpa]
Length = 1147
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 245/321 (76%), Positives = 275/321 (85%), Gaps = 17/321 (5%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
MLLSVQYRMHP IRDFPSR+FYQGRLTDSESV NLPDE YYKDP+LRPY+F+DV HGRES
Sbjct: 835 MLLSVQYRMHPQIRDFPSRYFYQGRLTDSESVANLPDETYYKDPLLRPYLFYDVTHGRES 894
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
HRGGSVSYQN+ EA+F + LYEHLQK+LKS+G+G++TVGIITPYKLQLKCLQ EF VL
Sbjct: 895 HRGGSVSYQNIHEAQFCLQLYEHLQKSLKSLGMGRITVGIITPYKLQLKCLQQEFSAVLK 954
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGN 180
SEEGKD+YINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRA+RALWVMGN
Sbjct: 955 SEEGKDIYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRAKRALWVMGN 1014
Query: 181 AGALTQSDDWAALIADSKARNCYMDMDSLPKEFSVALAAKAPGYGPLQGKIPHNARGLRS 240
A +L QSDDW+AL+AD+KARNCYM+MDSLPK+F V G L GK N RGLR
Sbjct: 1015 ATSLVQSDDWSALVADAKARNCYMNMDSLPKDFFVL-------KGTL-GKGSSNVRGLRL 1066
Query: 241 AGQRHRSFDMNMESRSGTPSEDDEK-----VSRNGNYRPFKPPLENSLDDFDQSGEKYRD 295
G RHRSFDM+MESRSGTPSEDDE +SRNG++ PFKPP++NSLDDFDQSG++ RD
Sbjct: 1067 GGPRHRSFDMHMESRSGTPSEDDENSGASVISRNGSFGPFKPPMDNSLDDFDQSGDRSRD 1126
Query: 296 AWQHGIQKKQSS----GGKGS 312
AWQ+GIQKKQ S G +GS
Sbjct: 1127 AWQYGIQKKQGSSAVVGKRGS 1147
>gi|449465617|ref|XP_004150524.1| PREDICTED: uncharacterized ATP-dependent helicase C29A10.10c-like
[Cucumis sativus]
Length = 1363
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 241/314 (76%), Positives = 266/314 (84%), Gaps = 8/314 (2%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
MLLSVQYRMHP IRDFPSR+FYQGRLTDSESV NLPDE YYKDP+LRPY FFD+ HGRES
Sbjct: 1046 MLLSVQYRMHPQIRDFPSRYFYQGRLTDSESVANLPDETYYKDPLLRPYTFFDITHGRES 1105
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
HRGGSVSYQN+ EA+F + +YEHLQKT+KS G+GKV+VGIITPYKLQLKCLQ EF VLN
Sbjct: 1106 HRGGSVSYQNIHEAQFCLRMYEHLQKTVKSSGIGKVSVGIITPYKLQLKCLQREFEEVLN 1165
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGN 180
SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGN
Sbjct: 1166 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGN 1225
Query: 181 AGALTQSDDWAALIADSKARNCYMDMDSLPKEFSVALAAKAPGYGPLQGKIPHNARGLRS 240
A AL QSDDWAALI D+KARNCYMDM+SLPK+F L K L GK N RGLRS
Sbjct: 1226 ANALIQSDDWAALITDAKARNCYMDMESLPKDF---LGQKGSTQSTLPGKNSSNTRGLRS 1282
Query: 241 AGQRHRSFDMNMESRSGTPSEDDEK-----VSRNGNYRPFKPPLENSLDDFDQSGEKYRD 295
A RHR+ D+++ESRSGTPSEDDEK ++RNGNYRP K +ENS +D DQSG+K RD
Sbjct: 1283 ALPRHRTLDIHVESRSGTPSEDDEKSNSAVITRNGNYRPSKAAVENSSEDLDQSGDKLRD 1342
Query: 296 AWQHGIQKKQSSGG 309
WQ+G+QK+Q S G
Sbjct: 1343 TWQYGMQKRQGSTG 1356
>gi|449529064|ref|XP_004171521.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized ATP-dependent
helicase C29A10.10c-like [Cucumis sativus]
Length = 1363
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 241/314 (76%), Positives = 266/314 (84%), Gaps = 8/314 (2%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
MLLSVQYRMHP IRDFPSR+FYQGRLTDSESV NLPDE YYKDP+LRPY FFD+ HGRES
Sbjct: 1046 MLLSVQYRMHPQIRDFPSRYFYQGRLTDSESVANLPDETYYKDPLLRPYTFFDITHGRES 1105
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
HRGGSVSYQN+ EA+F + +YEHLQKT+KS G+GKV+VGIITPYKLQLKCLQ EF VLN
Sbjct: 1106 HRGGSVSYQNIHEAQFCLRMYEHLQKTVKSSGIGKVSVGIITPYKLQLKCLQREFEEVLN 1165
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGN 180
SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGN
Sbjct: 1166 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGN 1225
Query: 181 AGALTQSDDWAALIADSKARNCYMDMDSLPKEFSVALAAKAPGYGPLQGKIPHNARGLRS 240
A AL QSDDWAALI D+KARNCYMDM+SLPK+F L K L GK N RGLRS
Sbjct: 1226 ANALIQSDDWAALITDAKARNCYMDMESLPKDF---LGQKGSTQSTLPGKNSSNTRGLRS 1282
Query: 241 AGQRHRSFDMNMESRSGTPSEDDEK-----VSRNGNYRPFKPPLENSLDDFDQSGEKYRD 295
A RHR+ D+++ESRSGTPSEDDEK ++RNGNYRP K +ENS +D DQSG+K RD
Sbjct: 1283 ALPRHRTLDIHVESRSGTPSEDDEKSNSAVITRNGNYRPSKAAVENSSEDLDQSGDKLRD 1342
Query: 296 AWQHGIQKKQSSGG 309
WQ+G+QK+Q S G
Sbjct: 1343 TWQYGMQKRQGSTG 1356
>gi|356522392|ref|XP_003529830.1| PREDICTED: probable helicase senataxin-like [Glycine max]
Length = 1388
Score = 497 bits (1279), Expect = e-138, Method: Compositional matrix adjust.
Identities = 238/314 (75%), Positives = 268/314 (85%), Gaps = 8/314 (2%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
MLLSVQYRMHP IRDFPSR+FYQGRLTDSESV LPDE YYKDP+LRPY+F+D+ HGRES
Sbjct: 1045 MLLSVQYRMHPQIRDFPSRYFYQGRLTDSESVAKLPDEPYYKDPLLRPYIFYDIRHGRES 1104
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
HRGGSVSYQN+ EA+F + LYEH+QKT+KS+G+GK+TVGIITPYKLQLKCLQ EF VLN
Sbjct: 1105 HRGGSVSYQNIHEAQFCLRLYEHVQKTVKSLGVGKITVGIITPYKLQLKCLQREFDEVLN 1164
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGN 180
SEEGKDLYINTVDAFQGQERDVIIMSCVRAS+HGVGFVADIRRMNVALTRARRALWVMGN
Sbjct: 1165 SEEGKDLYINTVDAFQGQERDVIIMSCVRASSHGVGFVADIRRMNVALTRARRALWVMGN 1224
Query: 181 AGALTQSDDWAALIADSKARNCYMDMDSLPKEFSVALAAKAPGYGPLQGKIPHNARGLRS 240
A AL QS+DWAALI D+K+RNCYMDMDSLPK+F L +KAP Y L GK N RG+RS
Sbjct: 1225 ANALLQSEDWAALINDAKSRNCYMDMDSLPKDF---LVSKAPSYTSLPGKPSSNMRGMRS 1281
Query: 241 AGQRHRSFDMNMESRSGTPSEDDEKV-----SRNGNYRPFKPPLENSLDDFDQSGEKYRD 295
G R+RS DM+MESR G PSE+DE + SRNGN R + +ENSLDDF+ G+K RD
Sbjct: 1282 GGPRYRSMDMHMESRLGPPSEEDENMGAPVSSRNGNLRQSRYSMENSLDDFEHGGDKSRD 1341
Query: 296 AWQHGIQKKQSSGG 309
AWQ+GIQKKQ+S G
Sbjct: 1342 AWQYGIQKKQNSSG 1355
>gi|356558781|ref|XP_003547681.1| PREDICTED: uncharacterized ATP-dependent helicase C29A10.10c-like
[Glycine max]
Length = 1328
Score = 496 bits (1277), Expect = e-138, Method: Compositional matrix adjust.
Identities = 238/314 (75%), Positives = 267/314 (85%), Gaps = 8/314 (2%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
MLLSVQYRMHP IRDFPSR+FYQGRLTDSESV LPDE YYKDP+LRPY+F+D+ HGRES
Sbjct: 1011 MLLSVQYRMHPQIRDFPSRYFYQGRLTDSESVAKLPDEPYYKDPLLRPYIFYDIRHGRES 1070
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
HRGGSVSYQN+ EA+F + LYEH+QKT+KS+GLGK+TVGIITPYKLQLKCLQ EF VLN
Sbjct: 1071 HRGGSVSYQNIHEAQFCLRLYEHVQKTVKSLGLGKITVGIITPYKLQLKCLQREFDEVLN 1130
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGN 180
SEEGKDLYINTVDAFQGQERDVIIMSCVRAS+HGVGFVADIRRMNVALTRARRALWVMGN
Sbjct: 1131 SEEGKDLYINTVDAFQGQERDVIIMSCVRASSHGVGFVADIRRMNVALTRARRALWVMGN 1190
Query: 181 AGALTQSDDWAALIADSKARNCYMDMDSLPKEFSVALAAKAPGYGPLQGKIPHNARGLRS 240
A AL QS+DWAALI D+K+RNCYMDMDSLPK+F L +KAP Y L GK N RG+RS
Sbjct: 1191 ANALLQSEDWAALINDAKSRNCYMDMDSLPKDF---LVSKAPVYTSLPGKPSSNMRGMRS 1247
Query: 241 AGQRHRSFDMNMESRSGTPSEDDEKV-----SRNGNYRPFKPPLENSLDDFDQSGEKYRD 295
G R+RS DM+MESR G PSEDDE + SRNGN+R + +ENSLDD + G+K RD
Sbjct: 1248 GGPRYRSMDMHMESRLGPPSEDDENMGAPVSSRNGNHRQLRYSMENSLDDVEHGGDKSRD 1307
Query: 296 AWQHGIQKKQSSGG 309
AWQ+GIQKK +S G
Sbjct: 1308 AWQYGIQKKHNSSG 1321
>gi|357513937|ref|XP_003627257.1| Helicase sen1 [Medicago truncatula]
gi|355521279|gb|AET01733.1| Helicase sen1 [Medicago truncatula]
Length = 1516
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 233/321 (72%), Positives = 264/321 (82%), Gaps = 17/321 (5%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
MLLSVQYRMHP IRDFPSR+FYQGRL+DSESVI LPDE YYKDP+LRPY+F+D+ HGRES
Sbjct: 1130 MLLSVQYRMHPQIRDFPSRYFYQGRLSDSESVIKLPDEAYYKDPLLRPYIFYDIRHGRES 1189
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
HRGGSVSYQN+ EA+F + LYEH+QKT+KS+GL K++VGIITPYKLQLKCLQ EF VLN
Sbjct: 1190 HRGGSVSYQNIHEAQFCLRLYEHIQKTVKSLGLPKISVGIITPYKLQLKCLQREFEEVLN 1249
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGN 180
SEEGKD+YINTVDAFQGQERDVIIMSCVRAS HGVGFVADIRRMNVALTRARRALWVMGN
Sbjct: 1250 SEEGKDIYINTVDAFQGQERDVIIMSCVRASTHGVGFVADIRRMNVALTRARRALWVMGN 1309
Query: 181 AGALTQSDDWAALIADSKARNCYMDMDSLPKEFSVALAAKAPGYGPLQGKIPHNARGLRS 240
A AL QS+DWAALIAD+++RNCYMDMDS+PK+F L K P Y PL GK P N RG+RS
Sbjct: 1310 ANALIQSEDWAALIADARSRNCYMDMDSIPKDF---LVTKGPVYTPLPGKPPSNMRGIRS 1366
Query: 241 AGQRH-RSFDMNMESRSGTPSEDDEKV------SRNGNYRPFKPPLENSLDDFDQSGEKY 293
G R+ RS +M+ ESR G PSEDDE++ SRNGN+RP + ENSLDD
Sbjct: 1367 GGPRYNRSMEMHTESRVGAPSEDDERMNGASASSRNGNHRPSRYLTENSLDD-------S 1419
Query: 294 RDAWQHGIQKKQSSGGKGSPR 314
RDAWQHG QK+Q S G + R
Sbjct: 1420 RDAWQHGNQKRQGSTGTMAKR 1440
>gi|15234617|ref|NP_194739.1| tRNA-splicing endonuclease positive effector-related protein
[Arabidopsis thaliana]
gi|4938486|emb|CAB43845.1| putative protein [Arabidopsis thaliana]
gi|7269910|emb|CAB81003.1| putative protein [Arabidopsis thaliana]
gi|332660321|gb|AEE85721.1| tRNA-splicing endonuclease positive effector-related protein
[Arabidopsis thaliana]
Length = 1311
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 220/313 (70%), Positives = 259/313 (82%), Gaps = 17/313 (5%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
+LL+VQYRMHP IRDFPSR+FYQGRLTDSESV PDE+YYKD VL+PY+FFD+ HGRES
Sbjct: 1004 LLLTVQYRMHPQIRDFPSRYFYQGRLTDSESVSTAPDEIYYKDSVLKPYLFFDISHGRES 1063
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
HRGGSVSY+N+DEA+F V +Y HLQ+TLKS+G GKV+VG+ITPYKLQLKCL+ EF N L+
Sbjct: 1064 HRGGSVSYENIDEARFCVGVYLHLQRTLKSLGGGKVSVGVITPYKLQLKCLKIEFGNALS 1123
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGN 180
+E +++YINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRA+RALWVMGN
Sbjct: 1124 QDELQEIYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRAKRALWVMGN 1183
Query: 181 AGALTQSDDWAALIADSKARNCYMDMDSLPKEFSVALAAKAPGYGPLQGKIPHNARGLRS 240
A AL + +DWAALI D+KARNC+M+M+SLPK+F V K P + P K P NARG RS
Sbjct: 1184 ASALMKCEDWAALITDAKARNCFMEMESLPKDFPV---PKVPSFIP---KAP-NARGFRS 1236
Query: 241 AGQRHRSFDMNMESRSGTPSEDDEKVS-----RNGNYRPFKPPLENSLDDFDQSGEKYRD 295
G R RS DM+ ESRSGTPSEDD+K+S RNGN R ENS+DD D G++YRD
Sbjct: 1237 GGPRTRSIDMHPESRSGTPSEDDKKLSTTTFPRNGNSR-----RENSVDDSDPPGDRYRD 1291
Query: 296 AWQHGIQKKQSSG 308
AWQHGIQ++Q+ G
Sbjct: 1292 AWQHGIQRRQNFG 1304
>gi|110740248|dbj|BAF02022.1| hypothetical protein [Arabidopsis thaliana]
Length = 466
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 220/313 (70%), Positives = 259/313 (82%), Gaps = 17/313 (5%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
+LL+VQYRMHP IRDFPSR+FYQGRLTDSESV PDE+YYKD VL+PY+FFD+ HGRES
Sbjct: 159 LLLTVQYRMHPQIRDFPSRYFYQGRLTDSESVSTAPDEIYYKDSVLKPYLFFDISHGRES 218
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
HRGGSVSY+N+DEA+F V +Y HLQ+TLKS+G GKV+VG+ITPYKLQLKCL+ EF N L+
Sbjct: 219 HRGGSVSYENIDEARFCVGVYLHLQRTLKSLGGGKVSVGVITPYKLQLKCLKIEFGNALS 278
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGN 180
+E +++YINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRA+RALWVMGN
Sbjct: 279 QDELQEIYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRAKRALWVMGN 338
Query: 181 AGALTQSDDWAALIADSKARNCYMDMDSLPKEFSVALAAKAPGYGPLQGKIPHNARGLRS 240
A AL + +DWAALI D+KARNC+M+M+SLPK+F V K P + P K P NARG RS
Sbjct: 339 ASALMKCEDWAALITDAKARNCFMEMESLPKDFPV---PKVPSFIP---KAP-NARGFRS 391
Query: 241 AGQRHRSFDMNMESRSGTPSEDDEKVS-----RNGNYRPFKPPLENSLDDFDQSGEKYRD 295
G R RS DM+ ESRSGTPSEDD+K+S RNGN R ENS+DD D G++YRD
Sbjct: 392 GGPRTRSIDMHPESRSGTPSEDDKKLSTTTFPRNGNSR-----RENSVDDSDPPGDRYRD 446
Query: 296 AWQHGIQKKQSSG 308
AWQHGIQ++Q+ G
Sbjct: 447 AWQHGIQRRQNFG 459
>gi|302141933|emb|CBI19136.3| unnamed protein product [Vitis vinifera]
Length = 1073
Score = 409 bits (1052), Expect = e-112, Method: Compositional matrix adjust.
Identities = 190/227 (83%), Positives = 209/227 (92%), Gaps = 3/227 (1%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
MLLSVQYRMHPHIRDFPSR+FYQGRLTDSESV NLPDE YYKDP+LRPYVF+D+ HGRES
Sbjct: 842 MLLSVQYRMHPHIRDFPSRYFYQGRLTDSESVTNLPDEAYYKDPLLRPYVFYDITHGRES 901
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
HRGGSVSYQN+ EA+ + LYEHLQKTLKS+G+GK++VGIITPYKLQLKCLQ EF +VL+
Sbjct: 902 HRGGSVSYQNIHEAQICLRLYEHLQKTLKSLGMGKISVGIITPYKLQLKCLQREFDDVLS 961
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGN 180
SEEGKDLYINTVDAFQGQERDVIIMSCVRAS+HGVGFVADIRRMNVALTRARRALWVMGN
Sbjct: 962 SEEGKDLYINTVDAFQGQERDVIIMSCVRASSHGVGFVADIRRMNVALTRARRALWVMGN 1021
Query: 181 AGALTQSDDWAALIADSKARNCYMDMDSLPKEFSVALAAKAPGYGPL 227
A AL QSDDWAALI+D++AR+CY+DMDSLPKEF L K P YGPL
Sbjct: 1022 ANALMQSDDWAALISDARARSCYLDMDSLPKEF---LVPKGPTYGPL 1065
>gi|413934411|gb|AFW68962.1| hypothetical protein ZEAMMB73_667161 [Zea mays]
Length = 1399
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 200/317 (63%), Positives = 245/317 (77%), Gaps = 19/317 (5%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
+LLSVQYRMHP IR+FPS++FYQGRLTDSESV+ LPDE YY+D ++ PY+F+D+ HGRES
Sbjct: 1092 ILLSVQYRMHPQIREFPSKYFYQGRLTDSESVVKLPDEAYYRDALMAPYIFYDLSHGRES 1151
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
HRGGS SYQN+ EA+F + LYEHLQK LK+ G KV+VGIITPYKLQLKCLQ EF++V+N
Sbjct: 1152 HRGGSSSYQNIHEAQFALRLYEHLQKFLKANGAKKVSVGIITPYKLQLKCLQREFKDVMN 1211
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGN 180
+EEGKD+YINTVDAFQGQERD+IIMSCVRASNHGVGFVADIRRMNVALTRARRALWV+GN
Sbjct: 1212 TEEGKDIYINTVDAFQGQERDIIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVVGN 1271
Query: 181 AGALTQSDDWAALIADSKARNCYMDMDSLPKEFSVALAAKAPGYGPLQGKIPHNARGLRS 240
A AL QS+DWA+LIAD+KAR C+MD+D +PK+F L K P P + +N R +R+
Sbjct: 1272 ANALMQSEDWASLIADAKARKCFMDLDCIPKDF---LPMKVPSNTPGRNS-SNNIRNMRT 1327
Query: 241 -AGQRHRSFDMNMESRSGT---PSEDDE--KVSRNGNYRPFKPPLENSLDDFDQSGEKYR 294
G R R DM E R+G P ED+ V RNG+YR +LDDF + G++ R
Sbjct: 1328 GGGPRPRHLDMFSEPRTGMNMRPDEDERLNSVPRNGSYR--------NLDDFVRPGDRPR 1379
Query: 295 DAWQHGIQKK-QSSGGK 310
D Q G+ ++ SS G+
Sbjct: 1380 DNLQFGVPRRPNSSNGR 1396
>gi|357140222|ref|XP_003571669.1| PREDICTED: uncharacterized protein LOC100842761 [Brachypodium
distachyon]
Length = 1452
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 193/311 (62%), Positives = 243/311 (78%), Gaps = 17/311 (5%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
+LLSVQYRMHP IR+FPSR+FYQGRLTDSESV+ LPDE YY+D ++ PY+F+D+ HGRES
Sbjct: 1053 ILLSVQYRMHPQIREFPSRYFYQGRLTDSESVVKLPDEAYYRDALMSPYIFYDISHGRES 1112
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
HRGGS SYQNV EA+F + LYEHLQK +K+ G KV+VGIITPYKLQLKCLQ EF V+N
Sbjct: 1113 HRGGSSSYQNVHEAQFALRLYEHLQKLMKANGGKKVSVGIITPYKLQLKCLQREFEEVMN 1172
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGN 180
+EEGKD+YINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWV+GN
Sbjct: 1173 TEEGKDIYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVVGN 1232
Query: 181 AGALTQSDDWAALIADSKARNCYMDMDSLPKEF-SVALAAKAPGYGPLQGKIPHNARGLR 239
A AL QS+DWAAL+ D+KAR C+MD+DS+PK+F ++ +++ PG +N R +R
Sbjct: 1233 ANALMQSEDWAALVTDAKARKCFMDLDSIPKDFLAMKISSNTPGRNS-----SNNTRNMR 1287
Query: 240 SAGQRHRSFDMNMESRSGTPSEDDEK---VSRNGNYRPFKPPLENSLDDFDQSGEKYRDA 296
+ G R R DM + R+G +++DE+ V RN +YR +LDD + G++ R+
Sbjct: 1288 TGGPRPRHLDMLPDPRNGMRADEDERPNSVPRNASYR--------NLDDLGRPGDRSREN 1339
Query: 297 WQHGIQKKQSS 307
Q G+ ++ +S
Sbjct: 1340 LQFGMPRRPNS 1350
>gi|242034805|ref|XP_002464797.1| hypothetical protein SORBIDRAFT_01g026860 [Sorghum bicolor]
gi|241918651|gb|EER91795.1| hypothetical protein SORBIDRAFT_01g026860 [Sorghum bicolor]
Length = 372
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 200/313 (63%), Positives = 244/313 (77%), Gaps = 18/313 (5%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
+LLSVQYRMHP IR+FPS++FYQGRLTDSESV+ LPDE YY+D ++ PY+F+D+ HGRES
Sbjct: 65 ILLSVQYRMHPQIREFPSKYFYQGRLTDSESVVQLPDEAYYRDALMAPYIFYDMSHGRES 124
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
HRGGS SYQN+ EA+F + LYEHLQK LK+ G KV+VGIITPYKLQLKCLQ EF++V+N
Sbjct: 125 HRGGSSSYQNIHEAQFALRLYEHLQKFLKANGAKKVSVGIITPYKLQLKCLQREFKDVMN 184
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGN 180
+EEGKD+YINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWV+GN
Sbjct: 185 TEEGKDIYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVVGN 244
Query: 181 AGALTQSDDWAALIADSKARNCYMDMDSLPKEFSVALAAKAPGYGPLQGKIPHNARGLRS 240
A AL QS+DWA+LIAD+KAR C+MD+DS+PK+F L K P P + +N R +R+
Sbjct: 245 ANALMQSEDWASLIADAKARKCFMDLDSIPKDF---LPMKVPSNTPGRNS-SNNIRNMRT 300
Query: 241 -AGQRHRSFDMNMESRSGT---PSEDDE--KVSRNGNYRPFKPPLENSLDDFDQSGEKYR 294
G R R DM E R+G P ED+ V RNG+YR +LDDF + G++ R
Sbjct: 301 GGGPRPRHLDMFSEPRAGMNMRPDEDERLNSVPRNGSYR--------NLDDFGRPGDRPR 352
Query: 295 DAWQHGIQKKQSS 307
D Q G+ ++ +S
Sbjct: 353 DNLQFGVPRRPNS 365
>gi|218184058|gb|EEC66485.1| hypothetical protein OsI_32578 [Oryza sativa Indica Group]
Length = 1360
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 191/310 (61%), Positives = 237/310 (76%), Gaps = 16/310 (5%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
+LLSVQYRMHP IR+FPSRHFYQGRLTDSESV+ LPDE YY+D ++ PY+F+D+ HGRES
Sbjct: 1056 ILLSVQYRMHPQIREFPSRHFYQGRLTDSESVVKLPDEAYYRDALMAPYIFYDISHGRES 1115
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
HRGGS SYQNV EA+F + LYE+LQK L++ G K +VGIITPYKLQLKCLQ EF V++
Sbjct: 1116 HRGGSSSYQNVHEAQFVLRLYENLQKFLRANGGKKASVGIITPYKLQLKCLQREFEEVMS 1175
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGN 180
+E+GKD+YINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWV+GN
Sbjct: 1176 TEDGKDIYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVVGN 1235
Query: 181 AGALTQSDDWAALIADSKARNCYMDMDSLPKEFSVALAAKAPGYGPLQGKIPHNARGLRS 240
AGAL QS+DWA LIAD+KAR C+MD+D++PK+F + PG +N R +R+
Sbjct: 1236 AGALMQSEDWALLIADAKARKCFMDLDTIPKDFLAMKISNTPGRN-----TSNNIRNMRT 1290
Query: 241 AGQRHRSFDMNMESRSGTPSEDDEK---VSRNGNYRPFKPPLENSLDDFDQSGEKYRDAW 297
G R R +M +SR ++DE+ V RNG+YR +LDD + G++ RD
Sbjct: 1291 GGPRPRHLEMLPDSRVSMRPDEDERSNSVPRNGSYR--------NLDDLGRPGDRSRDNL 1342
Query: 298 QHGIQKKQSS 307
G+ ++ +S
Sbjct: 1343 PFGMPRRPNS 1352
>gi|16924040|gb|AAL31652.1|AC079179_7 Putative DNA2-NAM7 helicase family protein [Oryza sativa]
gi|125573854|gb|EAZ15138.1| hypothetical protein OsJ_30554 [Oryza sativa Japonica Group]
Length = 1468
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 193/318 (60%), Positives = 240/318 (75%), Gaps = 18/318 (5%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
+LLSVQYRMHP IR+FPSRHFYQGRLTDSESV+ LPDE YY+D ++ PY+F+D+ HGRES
Sbjct: 1056 ILLSVQYRMHPQIREFPSRHFYQGRLTDSESVVKLPDEAYYRDALMAPYIFYDISHGRES 1115
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
HRGGS SYQNV EA+F + LYE+LQK L++ G K +VGIITPYKLQLKCLQ EF V++
Sbjct: 1116 HRGGSSSYQNVHEAQFVLRLYENLQKFLRANGGKKASVGIITPYKLQLKCLQREFEEVMS 1175
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGN 180
+E+GKD+YINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWV+GN
Sbjct: 1176 TEDGKDIYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVVGN 1235
Query: 181 AGALTQSDDWAALIADSKARNCYMDMDSLPKEFSVALAAKAPGYGPLQGKIPHNARGLRS 240
AGAL QS+DWA LIAD+KAR C+MD+D++PK+F + PG +N R +R+
Sbjct: 1236 AGALMQSEDWALLIADAKARKCFMDLDTIPKDFLAMKISNTPGRN-----TSNNIRNMRT 1290
Query: 241 AGQRHRSFDMNMESRSGTPSEDDEK---VSRNGNYRPFKPPLENSLDDFDQSGEKYRDAW 297
G R R +M +SR ++DE+ V RNG+YR +LDD + G++ RD
Sbjct: 1291 GGPRPRHLEMLPDSRVSMRPDEDERSNSVPRNGSYR--------NLDDLGRPGDRSRDNL 1342
Query: 298 QHGIQKK--QSSGGKGSP 313
G+ ++ S+G + P
Sbjct: 1343 PFGMPRRPNSSNGSRREP 1360
>gi|414868096|tpg|DAA46653.1| TPA: hypothetical protein ZEAMMB73_170269 [Zea mays]
Length = 809
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/305 (63%), Positives = 232/305 (76%), Gaps = 18/305 (5%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
+LLSVQYRMHP IR+FPS++FYQGRLTDSESV+ LPDE YY+D ++ PY+F+D+ HGRES
Sbjct: 504 ILLSVQYRMHPQIREFPSKYFYQGRLTDSESVVKLPDEAYYRDALMAPYIFYDMSHGRES 563
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
HRGGS SYQN+ EA+F + LYEHLQK LK+ G KV+VGIITPYKLQLKCLQ EF++V+N
Sbjct: 564 HRGGSSSYQNIHEAQFALRLYEHLQKFLKANGAKKVSVGIITPYKLQLKCLQREFKDVMN 623
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGN 180
+EEGKD+YINTVDAFQGQERD+IIMSCVRASNHGVGFVADIRRMNVALTRARRALWV+GN
Sbjct: 624 TEEGKDIYINTVDAFQGQERDIIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVVGN 683
Query: 181 AGALTQSDDWAALIADSKARNCYMDMDSLPKEFSVALAAKAPGYGPLQGKIPHNARGLRS 240
A AL QS+DWA+LIAD+KAR C+MD+DS+PK+F L + P P G+ N
Sbjct: 684 ANALMQSEDWASLIADAKARKCFMDLDSIPKDF---LPMRVPSNTP--GRNSSNNIRRTG 738
Query: 241 AGQRHRSFDMNMESRSGTPSEDDE-----KVSRNGNYRPFKPPLENSLDDFDQSGEKYRD 295
G R R DM E R+G DE V RNG+YR +LDDF G++ RD
Sbjct: 739 GGPRPRRLDMFSEPRAGMNMRPDEYERLNSVPRNGSYR--------NLDDFVHPGDRSRD 790
Query: 296 AWQHG 300
Q G
Sbjct: 791 NMQFG 795
>gi|184160102|gb|ACC68168.1| tRNA-splicing endonuclease positive effector-related protein
[Arabidopsis halleri subsp. halleri]
Length = 1054
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 170/227 (74%), Positives = 198/227 (87%), Gaps = 3/227 (1%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
+LL+VQYRMHP IRDFPSR+FYQGRL DSES+ + PDE+YYKDPVLRPY+FF++ HGRES
Sbjct: 829 LLLTVQYRMHPQIRDFPSRYFYQGRLKDSESISSAPDEIYYKDPVLRPYLFFNISHGRES 888
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
HRGGSVSY+NVDEA+F V +Y HLQKTLK +G GKV+VG+ITPYKLQLKCL+HEF N L
Sbjct: 889 HRGGSVSYENVDEARFCVGVYMHLQKTLKLLGAGKVSVGVITPYKLQLKCLKHEFGNALG 948
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGN 180
+E K++YINTVDAFQGQERDVIIMSCVRAS HGVGFV+DIRRMNVALTRARRALWVMGN
Sbjct: 949 QDELKEIYINTVDAFQGQERDVIIMSCVRASGHGVGFVSDIRRMNVALTRARRALWVMGN 1008
Query: 181 AGALTQSDDWAALIADSKARNCYMDMDSLPKEFSVALAAKAPGYGPL 227
A AL +S+DWAALI D++ RNC+M+MDSLP +F L K P Y P+
Sbjct: 1009 ASALMKSEDWAALITDARGRNCFMEMDSLPLDF---LIPKVPSYNPM 1052
>gi|15224719|ref|NP_179502.1| tRNA-splicing endonuclease positive effector-related protein
[Arabidopsis thaliana]
gi|3176714|gb|AAD12029.1| putative DNA2-NAM7 helicase family protein [Arabidopsis thaliana]
gi|330251755|gb|AEC06849.1| tRNA-splicing endonuclease positive effector-related protein
[Arabidopsis thaliana]
Length = 1090
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 169/227 (74%), Positives = 199/227 (87%), Gaps = 3/227 (1%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
+LL+VQYRMHP IRDFPSR+FYQGRL DSES+ + PDE+YYKDPVLRPY+FF++ HGRES
Sbjct: 841 LLLTVQYRMHPQIRDFPSRYFYQGRLKDSESISSAPDEIYYKDPVLRPYLFFNISHGRES 900
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
HRGGSVSY+NVDEA+F V +Y HLQKTLKS+G GKV+VG+ITPYKLQLKCL+HEF N L
Sbjct: 901 HRGGSVSYENVDEARFCVGVYMHLQKTLKSLGAGKVSVGVITPYKLQLKCLKHEFGNALG 960
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGN 180
+E K++YINTVDAFQGQERDVIIMSCVRAS HGVGFV+DIRRMNVALTRARRALWVMGN
Sbjct: 961 QDELKEIYINTVDAFQGQERDVIIMSCVRASGHGVGFVSDIRRMNVALTRARRALWVMGN 1020
Query: 181 AGALTQSDDWAALIADSKARNCYMDMDSLPKEFSVALAAKAPGYGPL 227
A AL +S+DWAALI+D++ RNC+M+MDSLP +F + K Y P+
Sbjct: 1021 ASALMKSEDWAALISDARGRNCFMEMDSLPLDFPI---PKVSSYNPM 1064
>gi|184160087|gb|ACC68154.1| tRNA-splicing endonuclease positive effector-related protein
[Arabidopsis halleri subsp. halleri]
Length = 1071
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 170/231 (73%), Positives = 199/231 (86%), Gaps = 3/231 (1%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
+LL+VQYRMHP IRDFPSR+FYQGRL DSES+ + PDE+YYKDPVLRPY+FF++ HGRES
Sbjct: 829 LLLTVQYRMHPQIRDFPSRYFYQGRLKDSESISSAPDEIYYKDPVLRPYLFFNISHGRES 888
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
HRGGSVSY+NVDEA+F V +Y HLQKTLKS+G GKV+VG+ITPYKLQLKCL+HEF N L
Sbjct: 889 HRGGSVSYENVDEARFCVGVYMHLQKTLKSLGAGKVSVGVITPYKLQLKCLKHEFGNALG 948
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGN 180
+E K++YINTVDAFQGQERDVIIMSCVRAS HGVGFV+DIRRMNVALTRARRALWVMGN
Sbjct: 949 QDELKEIYINTVDAFQGQERDVIIMSCVRASGHGVGFVSDIRRMNVALTRARRALWVMGN 1008
Query: 181 AGALTQSDDWAALIADSKARNCYMDMDSLPKEFSVALAAKAPGYGPLQGKI 231
A AL +S+DWAALI D++ RNC M+MDSLP +F + K P G + K+
Sbjct: 1009 ASALMKSEDWAALITDARGRNCVMEMDSLPLDFPI---PKVPSTGLITSKL 1056
>gi|115480936|ref|NP_001064061.1| Os10g0118900 [Oryza sativa Japonica Group]
gi|113638670|dbj|BAF25975.1| Os10g0118900, partial [Oryza sativa Japonica Group]
Length = 195
Score = 241 bits (616), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 122/178 (68%), Positives = 141/178 (79%), Gaps = 4/178 (2%)
Query: 69 QNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNSEEGKDLY 128
QNV EA+F + LYE+LQK L++ G K +VGIITPYKLQLKCLQ EF V+++E+GKD+Y
Sbjct: 1 QNVHEAQFVLRLYENLQKFLRANGGKKASVGIITPYKLQLKCLQREFEEVMSTEDGKDIY 60
Query: 129 INTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGNAGALTQSD 188
INTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWV+GNAGAL QS+
Sbjct: 61 INTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVVGNAGALMQSE 120
Query: 189 DWAALIADSKARNCYMDMDSLPKEFSVALAAKAPGYGPLQGKIPHNARGLRSAGQRHR 246
DWA LIAD+KAR C+MD+D++PK+F LA K P G N L G R R
Sbjct: 121 DWALLIADAKARKCFMDLDTIPKDF---LAMKISNSVPRNGSY-RNLDDLGRPGDRSR 174
>gi|110288551|gb|AAP51895.2| Helicase SEN1, putative, expressed [Oryza sativa Japonica Group]
gi|110288552|gb|ABG65893.1| Helicase SEN1, putative, expressed [Oryza sativa Japonica Group]
Length = 187
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 106/192 (55%), Positives = 137/192 (71%), Gaps = 16/192 (8%)
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVM 178
+++E+GKD+YINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWV+
Sbjct: 1 MSTEDGKDIYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVV 60
Query: 179 GNAGALTQSDDWAALIADSKARNCYMDMDSLPKEFSVALAAKAPGYGPLQGKIPHNARGL 238
GNAGAL QS+DWA LIAD+KAR C+MD+D++PK+F + PG +N R +
Sbjct: 61 GNAGALMQSEDWALLIADAKARKCFMDLDTIPKDFLAMKISNTPGR-----NTSNNIRNM 115
Query: 239 RSAGQRHRSFDMNMESRSGTPSEDDEK---VSRNGNYRPFKPPLENSLDDFDQSGEKYRD 295
R+ G R R +M +SR ++DE+ V RNG+YR +LDD + G++ RD
Sbjct: 116 RTGGPRPRHLEMLPDSRVSMRPDEDERSNSVPRNGSYR--------NLDDLGRPGDRSRD 167
Query: 296 AWQHGIQKKQSS 307
G+ ++ +S
Sbjct: 168 NLPFGMPRRPNS 179
>gi|384248536|gb|EIE22020.1| hypothetical protein COCSUDRAFT_17170, partial [Coccomyxa
subellipsoidea C-169]
Length = 367
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 106/215 (49%), Positives = 140/215 (65%), Gaps = 13/215 (6%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
+LSVQYRMHP IR+FPS +FY GRL D +SV V+Y+ P+L+PYV FDV HGRE
Sbjct: 138 MLSVQYRMHPTIREFPSNYFYNGRLEDGKSVKEAKPPVFYEHPLLKPYVIFDVSHGRE-Q 196
Query: 62 RGGSV--SYQNVDEAKFGVC-LYEH-LQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRN 117
RGGS S +N F C L H + +M LG VG++TPYK Q CL+ F
Sbjct: 197 RGGSNGGSLRNQASPFFYSCFLTSHSIFSGWLAMQLGGCEVGVVTPYKQQKTCLRDTFLR 256
Query: 118 VLNSEEGKD------LYINTVDAFQGQERDVIIMSCVRASNH--GVGFVADIRRMNVALT 169
E + I TVD+FQG++ DVII+SCVRAS+ GVGF+AD+RRMNVA+T
Sbjct: 257 AAGPEASAKARPLLTVMIETVDSFQGKQLDVIILSCVRASDRKSGVGFLADVRRMNVAIT 316
Query: 170 RARRALWVMGNAGALTQSDDWAALIADSKARNCYM 204
RA++ALWV+G+A L ++ WAAL+A+++ R C +
Sbjct: 317 RAKQALWVLGSAATLERNPVWAALLANARERGCVI 351
>gi|145247364|ref|XP_001395931.1| tRNA-splicing endonuclease [Aspergillus niger CBS 513.88]
gi|134080665|emb|CAK41330.1| unnamed protein product [Aspergillus niger]
Length = 2116
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 98/208 (47%), Positives = 129/208 (62%), Gaps = 2/208 (0%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL +QYRMHP I FPS FY GRL D ++ L +++ +L PY FFDV +S
Sbjct: 1603 LLDIQYRMHPEISAFPSSAFYDGRLQDGPNMAQLRVRPWHQSELLSPYRFFDVQGLHQSA 1662
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
G S N+ E + + LYE L ++ + +GIITPYK QL+ L+ +F +
Sbjct: 1663 AKGH-SLINIAELRVAMQLYERLVTDFRAFNFDR-KIGIITPYKGQLRELKTQFAARYGN 1720
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGNA 181
E + NT DAFQG+E +VII SCVRASN G+GF+ADIRRMNV LTRA+ +LWV+GN+
Sbjct: 1721 EIFNKIDFNTTDAFQGRESEVIIFSCVRASNKGIGFLADIRRMNVGLTRAKSSLWVLGNS 1780
Query: 182 GALTQSDDWAALIADSKARNCYMDMDSL 209
AL Q + W LI D++ RN Y D D L
Sbjct: 1781 QALVQGEFWNGLIKDARRRNVYTDGDVL 1808
>gi|358371124|dbj|GAA87733.1| tRNA-splicing endonuclease [Aspergillus kawachii IFO 4308]
Length = 2117
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 98/208 (47%), Positives = 129/208 (62%), Gaps = 2/208 (0%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL +QYRMHP I FPS FY GRL D ++ L +++ +L PY FFDV +S
Sbjct: 1603 LLDIQYRMHPEISAFPSSAFYDGRLQDGPNMAQLRVRPWHQSELLSPYRFFDVQGLHQSA 1662
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
G S N+ E + + LYE L ++ + +GIITPYK QL+ L+ +F +
Sbjct: 1663 AKGH-SLINIAELRVAMQLYERLVTDFRAFNFDR-KIGIITPYKGQLRELKTQFAARYGN 1720
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGNA 181
E + NT DAFQG+E +VII SCVRASN G+GF+ADIRRMNV LTRA+ +LWV+GN+
Sbjct: 1721 EIFNKIDFNTTDAFQGRESEVIIFSCVRASNKGIGFLADIRRMNVGLTRAKSSLWVLGNS 1780
Query: 182 GALTQSDDWAALIADSKARNCYMDMDSL 209
AL Q + W LI D++ RN Y D D L
Sbjct: 1781 QALVQGEFWNGLIKDARRRNVYTDGDVL 1808
>gi|350637189|gb|EHA25547.1| hypothetical protein ASPNIDRAFT_42089 [Aspergillus niger ATCC 1015]
Length = 2051
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 98/208 (47%), Positives = 129/208 (62%), Gaps = 2/208 (0%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL +QYRMHP I FPS FY GRL D ++ L +++ +L PY FFDV +S
Sbjct: 1603 LLDIQYRMHPEISAFPSSAFYDGRLQDGPNMAQLRVRPWHQSELLSPYRFFDVQGLHQSA 1662
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
G S N+ E + + LYE L ++ + +GIITPYK QL+ L+ +F +
Sbjct: 1663 AKGH-SLINIAELRVAMQLYERLVTDFRAFNFDR-KIGIITPYKGQLRELKTQFAARYGN 1720
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGNA 181
E + NT DAFQG+E +VII SCVRASN G+GF+ADIRRMNV LTRA+ +LWV+GN+
Sbjct: 1721 EIFNKIDFNTTDAFQGRESEVIIFSCVRASNKGIGFLADIRRMNVGLTRAKSSLWVLGNS 1780
Query: 182 GALTQSDDWAALIADSKARNCYMDMDSL 209
AL Q + W LI D++ RN Y D D L
Sbjct: 1781 QALVQGEFWNGLIKDARRRNVYTDGDVL 1808
>gi|67903368|ref|XP_681940.1| hypothetical protein AN8671.2 [Aspergillus nidulans FGSC A4]
gi|40740903|gb|EAA60093.1| hypothetical protein AN8671.2 [Aspergillus nidulans FGSC A4]
Length = 2234
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 100/209 (47%), Positives = 128/209 (61%), Gaps = 4/209 (1%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL +QYRMHP I FP FY GRL D + L +++ +L PY FFDV +S
Sbjct: 1608 LLDIQYRMHPAISMFPRTAFYDGRLQDGPDMARLRTRPWHQSELLSPYRFFDVQGLHQSA 1667
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGL-GKVTVGIITPYKLQLKCLQHEFRNVLN 120
G S N E K + LYE L K K GKV GIITPYK QL+ L+ +F N
Sbjct: 1668 PKGH-SLVNFAELKVAMQLYERLLKDFKEYDFSGKV--GIITPYKGQLRELKTQFANKYG 1724
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGN 180
+ + NT DAFQG+E +VII SCVRASN G+GF++DIRRMNV LTRA+ +LWV+GN
Sbjct: 1725 NAIFNMIDFNTTDAFQGREAEVIIFSCVRASNKGIGFLSDIRRMNVGLTRAKSSLWVLGN 1784
Query: 181 AGALTQSDDWAALIADSKARNCYMDMDSL 209
+ +L Q + W +L+ D++ RN Y D D L
Sbjct: 1785 SQSLVQGEFWRSLVTDARQRNVYTDGDIL 1813
>gi|154280609|ref|XP_001541117.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150411296|gb|EDN06684.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 2150
Score = 180 bits (457), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 98/208 (47%), Positives = 126/208 (60%), Gaps = 2/208 (0%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL QYRMHP I FPS FY GRL D + L ++ +L PY FFDV G S
Sbjct: 1607 LLDTQYRMHPEISRFPSAAFYDGRLKDGPDMAKLRVRPWHSSELLGPYRFFDV-QGLHSS 1665
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
S S N+ E + + LYE L + K +GIITPYK QL+ ++++F N S
Sbjct: 1666 APKSHSLVNLAELRVAMKLYERLTIDYLTYDF-KGKIGIITPYKGQLREMKNQFANKYGS 1724
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGNA 181
+ NT DAFQG+E +VII SCVRASN G+GF+ADIRRMNV LTRA+ +LWV+GN+
Sbjct: 1725 SIFTTVEFNTTDAFQGRECEVIIFSCVRASNRGIGFLADIRRMNVGLTRAKSSLWVLGNS 1784
Query: 182 GALTQSDDWAALIADSKARNCYMDMDSL 209
+L Q + W LI D+++RN Y D L
Sbjct: 1785 QSLVQGEFWNGLITDAQSRNLYTQGDIL 1812
>gi|261192749|ref|XP_002622781.1| tRNA-splicing endonuclease [Ajellomyces dermatitidis SLH14081]
gi|239589263|gb|EEQ71906.1| tRNA-splicing endonuclease [Ajellomyces dermatitidis SLH14081]
Length = 2114
Score = 180 bits (457), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 97/208 (46%), Positives = 126/208 (60%), Gaps = 2/208 (0%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL QYRMHP I FPS FY GRL D + L ++K +L PY FFDV G S
Sbjct: 1606 LLDTQYRMHPEISRFPSAAFYDGRLQDGPGMAKLRVRPWHKSELLGPYRFFDV-QGLHSS 1664
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
S NV E + + LYE L ++ +GIITPYK QL+ ++++F N +
Sbjct: 1665 APKGHSLVNVAELRVAMKLYERLITDYRTYDFTG-RIGIITPYKGQLREMKNQFANKYGN 1723
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGNA 181
+ NT DAFQG+E +VII SCVRASN G+GF+ADIRRMNV LTRA+ +LWV+GN+
Sbjct: 1724 SIFTKVEFNTTDAFQGRECEVIIFSCVRASNRGIGFLADIRRMNVGLTRAKSSLWVLGNS 1783
Query: 182 GALTQSDDWAALIADSKARNCYMDMDSL 209
+L Q + W LI D+++RN Y D L
Sbjct: 1784 QSLVQGEFWNGLITDAQSRNLYTQGDVL 1811
>gi|327355296|gb|EGE84153.1| tRNA-splicing endonuclease [Ajellomyces dermatitidis ATCC 18188]
Length = 2179
Score = 180 bits (457), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 97/208 (46%), Positives = 126/208 (60%), Gaps = 2/208 (0%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL QYRMHP I FPS FY GRL D + L ++K +L PY FFDV G S
Sbjct: 1606 LLDTQYRMHPEISRFPSAAFYDGRLQDGPGMAKLRVRPWHKSELLGPYRFFDV-QGLHSS 1664
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
S NV E + + LYE L ++ +GIITPYK QL+ ++++F N +
Sbjct: 1665 APKGHSLVNVAELRVAMKLYERLITDYRTYDFTG-RIGIITPYKGQLREMKNQFANKYGN 1723
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGNA 181
+ NT DAFQG+E +VII SCVRASN G+GF+ADIRRMNV LTRA+ +LWV+GN+
Sbjct: 1724 SIFTKVEFNTTDAFQGRECEVIIFSCVRASNRGIGFLADIRRMNVGLTRAKSSLWVLGNS 1783
Query: 182 GALTQSDDWAALIADSKARNCYMDMDSL 209
+L Q + W LI D+++RN Y D L
Sbjct: 1784 QSLVQGEFWNGLITDAQSRNLYTQGDVL 1811
>gi|239610200|gb|EEQ87187.1| tRNA-splicing endonuclease [Ajellomyces dermatitidis ER-3]
Length = 2114
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 97/208 (46%), Positives = 126/208 (60%), Gaps = 2/208 (0%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL QYRMHP I FPS FY GRL D + L ++K +L PY FFDV G S
Sbjct: 1606 LLDTQYRMHPEISRFPSAAFYDGRLQDGPGMAKLRVRPWHKSELLGPYRFFDV-QGLHSS 1664
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
S NV E + + LYE L ++ +GIITPYK QL+ ++++F N +
Sbjct: 1665 APKGHSLVNVAELRVAMKLYERLITDYRTYDFTG-RIGIITPYKGQLREMKNQFANKYGN 1723
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGNA 181
+ NT DAFQG+E +VII SCVRASN G+GF+ADIRRMNV LTRA+ +LWV+GN+
Sbjct: 1724 SIFTKVEFNTTDAFQGRECEVIIFSCVRASNRGIGFLADIRRMNVGLTRAKSSLWVLGNS 1783
Query: 182 GALTQSDDWAALIADSKARNCYMDMDSL 209
+L Q + W LI D+++RN Y D L
Sbjct: 1784 QSLVQGEFWNGLITDAQSRNLYTQGDVL 1811
>gi|344301279|gb|EGW31591.1| hypothetical protein SPAPADRAFT_51586 [Spathaspora passalidarum NRRL
Y-27907]
Length = 1937
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 92/202 (45%), Positives = 128/202 (63%), Gaps = 3/202 (1%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL VQYRMHP I FPS FY +L D E ++ D ++KDP L PY FFD++ E
Sbjct: 1567 LLDVQYRMHPQISQFPSAEFYNSKLKDGEGMLEKNDRPWHKDPPLTPYRFFDIVSKHE-R 1625
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
S S NV+EA+ + L + L L + +GII+PYK Q++ +++EF
Sbjct: 1626 DDQSRSLFNVEEARVALELVQKLMTILPQDKF-RGRIGIISPYKEQIRSIKNEFIRRYGR 1684
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVMGN 180
D+ NTVD FQGQE+++IIMSCVRAS G VGF++D+RRMNVALTRAR LW++GN
Sbjct: 1685 AIQDDIDFNTVDGFQGQEKEIIIMSCVRASPSGNVGFLSDVRRMNVALTRARTTLWILGN 1744
Query: 181 AGALTQSDDWAALIADSKARNC 202
+L++++ W L+ D+ R+C
Sbjct: 1745 KDSLSRNNVWRRLLEDASNRDC 1766
>gi|50303681|ref|XP_451783.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640915|emb|CAH02176.1| KLLA0B05555p [Kluyveromyces lactis]
Length = 1997
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/203 (42%), Positives = 129/203 (63%), Gaps = 2/203 (0%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL VQYRMHP I FPS FY+G+L D SV + ++K PY FFD++ G++
Sbjct: 1644 LLDVQYRMHPAISKFPSLEFYKGKLQDGSSVQEVNTRDWHKKYPFGPYKFFDIVTGKQKQ 1703
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
++SY N +E K + L E+L T +S +GII+PY+ Q++ ++++FR
Sbjct: 1704 NTKTMSYTNPEETKVAIELVENLLATYESKYDFTNRIGIISPYREQMQNMRNQFRRYFGD 1763
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASNH--GVGFVADIRRMNVALTRARRALWVMG 179
+ + NT+D FQGQE+D+II+SCVRA ++ VGF+ D RRMNVALTRA+ +LW++G
Sbjct: 1764 QIRSYIDFNTIDGFQGQEKDIIIISCVRADDNSTSVGFLKDFRRMNVALTRAKCSLWILG 1823
Query: 180 NAGALTQSDDWAALIADSKARNC 202
+ +L + W LI+D+K RNC
Sbjct: 1824 HHKSLVNNKLWKHLISDAKERNC 1846
>gi|225558060|gb|EEH06345.1| DEAD-box type RNA helicase [Ajellomyces capsulatus G186AR]
Length = 2150
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 111/276 (40%), Positives = 147/276 (53%), Gaps = 35/276 (12%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL QYRMHP I FPS FY GRL D + L ++ +L PY FFDV G S
Sbjct: 1607 LLDTQYRMHPEISRFPSAAFYDGRLKDGPDMAKLRVRPWHSSELLGPYRFFDV-QGLHSS 1665
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLG-KVTVGIITPYKLQLKCLQHEFRNVLN 120
S N+ E + + LYE L T+ M K +GIITPYK QL+ ++++F N
Sbjct: 1666 APKGHSLVNLAELRVAMKLYERL--TIDYMTYDFKGKIGIITPYKGQLREMKNQFANKYG 1723
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGN 180
+ + NT DAFQG+E +VII SCVRASN G+GF+ADIRRMNV LTRA+ +LWV+GN
Sbjct: 1724 NSIFTTVEFNTTDAFQGRECEVIIFSCVRASNRGIGFLADIRRMNVGLTRAKSSLWVLGN 1783
Query: 181 AGALTQSDDWAALIADSKARNCYMDMDSLPKEFSVALAAKAPGYGPLQGKIPHNARGLRS 240
+ +L Q + W LI D+++RN Y QG I L+
Sbjct: 1784 SQSLVQGEFWNGLITDAQSRNLYT-----------------------QGDI------LKL 1814
Query: 241 AGQRHRSFDMNMESRS--GTPSEDDEKVSRNGNYRP 274
+ S DM ++ PSE + +SRNG+ P
Sbjct: 1815 LQRPQISLDMELKDVQMIDAPSEKNSPLSRNGSMTP 1850
>gi|302811594|ref|XP_002987486.1| hypothetical protein SELMODRAFT_426269 [Selaginella moellendorffii]
gi|300144892|gb|EFJ11573.1| hypothetical protein SELMODRAFT_426269 [Selaginella moellendorffii]
Length = 2281
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 99/203 (48%), Positives = 129/203 (63%), Gaps = 9/203 (4%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVI-NLPDEVYYKDPVLRPYVFFDVIHGRES 60
+LS QYRMHP IR FPS +FY +L D SV+ + ++KD RPY FFDVI G+E
Sbjct: 1831 MLSTQYRMHPDIRKFPSSYFYNNQLVDGASVLGDKRRSSFHKDRFFRPYTFFDVIDGQE- 1889
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQ-KTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVL 119
R G S NVDE V LYE Q K + + G++ G+ITPYK QL L+ F+
Sbjct: 1890 -RAGGSSVGNVDEVDVAVKLYERFQAKYPQEIQPGRI--GVITPYKQQLNMLKRAFQR-F 1945
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRAS--NHGVGFVADIRRMNVALTRARRALWV 177
+ L NT+D FQG+E D++I+S VRAS G+GFVADIRRMNVALTR R +LW+
Sbjct: 1946 GEKISSILEFNTIDGFQGREVDILILSTVRASLEPKGIGFVADIRRMNVALTRPRFSLWI 2005
Query: 178 MGNAGALTQSDDWAALIADSKAR 200
+G+A AL + WAAL+ D+ +R
Sbjct: 2006 IGSARALRSNRAWAALLEDATSR 2028
>gi|242781508|ref|XP_002479814.1| tRNA-splicing endonuclease, putative [Talaromyces stipitatus ATCC
10500]
gi|218719961|gb|EED19380.1| tRNA-splicing endonuclease, putative [Talaromyces stipitatus ATCC
10500]
Length = 1391
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 98/209 (46%), Positives = 125/209 (59%), Gaps = 4/209 (1%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL +QYRMHP I FPS FY G L D + L ++ +L PY FFDV +S
Sbjct: 894 LLDIQYRMHPAISRFPSVTFYDGLLQDGPDMAKLRARPWHNSQLLSPYRFFDVQGLHQSA 953
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGL-GKVTVGIITPYKLQLKCLQHEFRNVLN 120
G S NV E + LYE L KS+ GK+ GIITPYK QL+ ++ F
Sbjct: 954 SKGH-SLINVAELNVAMQLYERLLTDFKSIDFSGKI--GIITPYKGQLREMKIRFAAKYG 1010
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGN 180
+ + NT DAFQG+E +VII SCVRASN G+GF++DIRRMNV LTRA+ +LWV+GN
Sbjct: 1011 NSIFSKVEFNTTDAFQGRESEVIIFSCVRASNKGIGFLSDIRRMNVGLTRAKSSLWVLGN 1070
Query: 181 AGALTQSDDWAALIADSKARNCYMDMDSL 209
+ +L Q + W LI D++ RN Y D D L
Sbjct: 1071 SQSLIQGEFWGKLITDARQRNLYTDGDVL 1099
>gi|296413292|ref|XP_002836348.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295630165|emb|CAZ80539.1| unnamed protein product [Tuber melanosporum]
Length = 1971
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 101/230 (43%), Positives = 143/230 (62%), Gaps = 7/230 (3%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LLS+QYRMHP I FP + FY L D E++ L EV++K+P+ PY FF+ I G+ES
Sbjct: 1546 LLSIQYRMHPMISSFPRKQFYDSELEDGENMKELRTEVWHKNPIYAPYRFFN-IAGQESA 1604
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGL-GKVTVGIITPYKLQLKCLQHEFRNVLN 120
GG S N EA+ + LY+ L GK+ GIITPYK Q+ L+ FR+V
Sbjct: 1605 -GGLHSLVNRQEAQSALSLYQRLTADFPQTNFDGKI--GIITPYKQQINLLKTTFRDVYG 1661
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVMG 179
+ NT DAFQG+ERD+II SCVRAS G+GF++D+RRMNV LTRA+ +L+V+G
Sbjct: 1662 ENICDTIDFNTTDAFQGRERDIIIFSCVRASQEGGIGFLSDVRRMNVGLTRAKFSLFVLG 1721
Query: 180 NAGALTQSDDWAALIADSKARNCYMDMDSLPKEFSVALAAKAPGYGPLQG 229
++ +L ++ WA+L+ D+K R + D ++ + S A +A G G +G
Sbjct: 1722 HSTSLMRNRLWASLVQDAKDRGVF-DEETFAEFGSNAKGNRAGGTGAFRG 1770
>gi|325095786|gb|EGC49096.1| helicase SEN1 [Ajellomyces capsulatus H88]
Length = 2150
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 98/209 (46%), Positives = 127/209 (60%), Gaps = 4/209 (1%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL QYRMHP I FPS FY GRL D + L ++ +L PY FFDV G S
Sbjct: 1607 LLDTQYRMHPEISRFPSTAFYDGRLKDGPDMAKLRVRPWHSSELLGPYRFFDV-QGLHSS 1665
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLG-KVTVGIITPYKLQLKCLQHEFRNVLN 120
S N+ E + + LYE L T+ M K +GIITPYK QL+ ++++F N
Sbjct: 1666 APKGHSLVNLAELRVAMKLYERL--TIDYMTYDFKGKIGIITPYKGQLREMKNQFANKYG 1723
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGN 180
+ + NT DAFQG+E +VII SCVRASN G+GF+ADIRRMNV LTRA+ +LWV+GN
Sbjct: 1724 NSIFTTVEFNTTDAFQGRECEVIIFSCVRASNRGIGFLADIRRMNVGLTRAKSSLWVLGN 1783
Query: 181 AGALTQSDDWAALIADSKARNCYMDMDSL 209
+ +L Q + W LI D+++RN Y D L
Sbjct: 1784 SQSLVQGEFWNGLITDAQSRNLYTQGDVL 1812
>gi|115386780|ref|XP_001209931.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114190929|gb|EAU32629.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 2086
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 95/209 (45%), Positives = 130/209 (62%), Gaps = 4/209 (1%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL +QYRMHP I FPS FY G+L D + L +++ +L PY FFDV +S
Sbjct: 1610 LLDIQYRMHPEISAFPSSTFYDGKLQDGPDMARLRTRPWHQGELLGPYRFFDVQGLHQSA 1669
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGL-GKVTVGIITPYKLQLKCLQHEFRNVLN 120
G S N+ E + + LYE L + + GK+ GIITPYK QL+ ++++F
Sbjct: 1670 AKGH-SLINMAELRVAMQLYERLSTDFRGIDFAGKI--GIITPYKGQLREMKNQFAARYG 1726
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGN 180
+E + NT DAFQG+E +VII SCVRASN G+GF++DIRRMNV LTRA+ +LWV+GN
Sbjct: 1727 NEIFSKIDFNTTDAFQGRESEVIIFSCVRASNKGIGFLSDIRRMNVGLTRAKSSLWVLGN 1786
Query: 181 AGALTQSDDWAALIADSKARNCYMDMDSL 209
+ +L Q + W LI D++ RN Y + D L
Sbjct: 1787 SQSLVQGEFWNGLIKDARRRNVYTEGDIL 1815
>gi|307105370|gb|EFN53619.1| expressed protein [Chlorella variabilis]
Length = 1487
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 92/214 (42%), Positives = 126/214 (58%), Gaps = 23/214 (10%)
Query: 14 RDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESHRGGSVSYQNVDE 73
R FPS HFY GRL D+ES+ ++P +Y P+++PYVFFDV G+E R G S N E
Sbjct: 744 RVFPSAHFYGGRLRDAESIRDMPPAPFYAHPLMKPYVFFDVAKGKELRREGGGSLSNRAE 803
Query: 74 AKFGVCLYEHLQKTL---KSMGLGKVT-------------------VGIITPYKLQLKCL 111
A CL+ L+ L G +T VG+ITPY+ Q K L
Sbjct: 804 ALLAACLFAELRSFLIERAQQQPGSITGPTSDSHPAAMLPLPEVSAVGVITPYREQRKLL 863
Query: 112 QHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTR 170
+ F V +++I TVD+FQG++ DV+I+SCVRAS G+GFV DIRRMNVA+TR
Sbjct: 864 REMFEEVCGKGPASEVFIETVDSFQGKQLDVVILSCVRASVGGGLGFVNDIRRMNVAITR 923
Query: 171 ARRALWVMGNAGALTQSDDWAALIADSKARNCYM 204
A+R+LWV+G + L + +WAALI D++ R +
Sbjct: 924 AKRSLWVLGASATLRANREWAALIGDAEERGLVI 957
>gi|320036907|gb|EFW18845.1| tRNA-splicing endonuclease [Coccidioides posadasii str. Silveira]
Length = 1086
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 95/206 (46%), Positives = 124/206 (60%), Gaps = 2/206 (0%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL QYRMHP I FPS FY GRL D S+ L ++ +L PY FFDV G +
Sbjct: 551 LLDTQYRMHPEISRFPSAAFYDGRLQDGPSMAKLRIRPWHSTELLGPYRFFDV-QGMHAS 609
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
S N+ E + + LY+ L + + +GIITPYK QL+ L+ F N +
Sbjct: 610 APKGHSLVNMAELRVAMRLYDRLVQDFPTYDFAG-KIGIITPYKGQLRELKQHFANKYGN 668
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGNA 181
K + NT DAFQG+E +VII SCVRASNHG+GF+ADIRRMNV LTRA+ +LWV+GN+
Sbjct: 669 AIFKAVEFNTTDAFQGRECEVIIFSCVRASNHGIGFLADIRRMNVGLTRAKSSLWVLGNS 728
Query: 182 GALTQSDDWAALIADSKARNCYMDMD 207
+L + + W LI D++ R Y D D
Sbjct: 729 QSLARGEFWRGLINDARERQLYTDGD 754
>gi|255714232|ref|XP_002553398.1| KLTH0D15862p [Lachancea thermotolerans]
gi|238934778|emb|CAR22960.1| KLTH0D15862p [Lachancea thermotolerans CBS 6340]
Length = 2090
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 84/203 (41%), Positives = 128/203 (63%), Gaps = 2/203 (0%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL+VQYRMHP I FPS FY+G+LTD + + ++ P L PY FFD+ G++
Sbjct: 1628 LLNVQYRMHPAISKFPSIEFYKGKLTDGPDMETINTRPWHSRPPLGPYKFFDIATGKQEQ 1687
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
++S+ N +E K + L E+L + + +GII+PY+ Q++ ++ EFR +
Sbjct: 1688 NKKTMSFVNFEECKVAIELVEYLLNSYEKSFDFSGKIGIISPYREQMQTMRREFRRYFGN 1747
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRA--SNHGVGFVADIRRMNVALTRARRALWVMG 179
+ NT+D FQGQE+++II+SCVRA + GVGF+ D RRMNVALTRA+ ++W++G
Sbjct: 1748 TIAGYVDFNTIDGFQGQEKEIIIISCVRADDTKSGVGFLKDFRRMNVALTRAKTSMWILG 1807
Query: 180 NAGALTQSDDWAALIADSKARNC 202
+ +L ++ W LI D+K RNC
Sbjct: 1808 HHSSLFKNKLWRNLITDAKDRNC 1830
>gi|212526670|ref|XP_002143492.1| tRNA-splicing endonuclease, putative [Talaromyces marneffei ATCC
18224]
gi|210072890|gb|EEA26977.1| tRNA-splicing endonuclease, putative [Talaromyces marneffei ATCC
18224]
Length = 2105
Score = 177 bits (449), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 98/209 (46%), Positives = 124/209 (59%), Gaps = 4/209 (1%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL +QYRMHP I FPS FY G L D + L ++ +L PY FFDV +S
Sbjct: 1598 LLDIQYRMHPAISQFPSVTFYDGLLQDGPDMAKLRARPWHNSQLLSPYRFFDVQGLHQSA 1657
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGL-GKVTVGIITPYKLQLKCLQHEFRNVLN 120
G S N+ E + LYE L KS GK+ GIITPYK QL+ ++ F
Sbjct: 1658 SKGH-SLINIAELNVAMQLYERLLADFKSYDFSGKI--GIITPYKGQLREMRTRFAARYG 1714
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGN 180
+ + NT DAFQG+E +VII SCVRASN G+GF++DIRRMNV LTRA+ +LWV+GN
Sbjct: 1715 NSIFSKVEFNTTDAFQGRESEVIIFSCVRASNKGIGFLSDIRRMNVGLTRAKSSLWVLGN 1774
Query: 181 AGALTQSDDWAALIADSKARNCYMDMDSL 209
+ +L Q + W LI DS+ RN Y D D L
Sbjct: 1775 SQSLIQGEFWKKLITDSRQRNVYTDGDVL 1803
>gi|303318509|ref|XP_003069254.1| Zinc knuckle domain containing protein [Coccidioides posadasii C735
delta SOWgp]
gi|240108940|gb|EER27109.1| Zinc knuckle domain containing protein [Coccidioides posadasii C735
delta SOWgp]
Length = 2141
Score = 177 bits (449), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 97/207 (46%), Positives = 126/207 (60%), Gaps = 4/207 (1%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL QYRMHP I FPS FY GRL D S+ L ++ +L PY FFDV G +
Sbjct: 1606 LLDTQYRMHPEISRFPSAAFYDGRLQDGPSMAKLRIRPWHSTELLGPYRFFDV-QGMHAS 1664
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGL-GKVTVGIITPYKLQLKCLQHEFRNVLN 120
S N+ E + + LY+ L + + GK+ GIITPYK QL+ L+ F N
Sbjct: 1665 APKGHSLVNMAELRVAMRLYDRLVQDFPTYDFAGKI--GIITPYKGQLRELKQHFANKYG 1722
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGN 180
+ K + NT DAFQG+E +VII SCVRASNHG+GF+ADIRRMNV LTRA+ +LWV+GN
Sbjct: 1723 NAIFKAVEFNTTDAFQGRECEVIIFSCVRASNHGIGFLADIRRMNVGLTRAKSSLWVLGN 1782
Query: 181 AGALTQSDDWAALIADSKARNCYMDMD 207
+ +L + + W LI D++ R Y D D
Sbjct: 1783 SQSLARGEFWRGLINDARERQLYTDGD 1809
>gi|258572474|ref|XP_002544999.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237905269|gb|EEP79670.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 2153
Score = 177 bits (448), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 96/207 (46%), Positives = 126/207 (60%), Gaps = 4/207 (1%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL QYRMHP I FPS FY GRL D + L ++ +L PY FFDV G +
Sbjct: 1605 LLDTQYRMHPEISRFPSTAFYDGRLQDGPDMARLRMRPWHNTSLLGPYRFFDV-QGMHAS 1663
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGL-GKVTVGIITPYKLQLKCLQHEFRNVLN 120
S N+ E + + LYE L + GK+ GIITPYK QL+ L+ +F N
Sbjct: 1664 APKGHSLVNLAELRVAMRLYERLIADFPTYDFSGKI--GIITPYKGQLRELKQQFANKYG 1721
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGN 180
+ K + NT DAFQG+E +VII SCVRAS+HG+GF+ADIRRMNV LTRA+ +LWV+GN
Sbjct: 1722 NAIFKAVEFNTTDAFQGRECEVIIFSCVRASSHGIGFLADIRRMNVGLTRAKSSLWVLGN 1781
Query: 181 AGALTQSDDWAALIADSKARNCYMDMD 207
+ +L + + W L+ D++ RN Y D D
Sbjct: 1782 SQSLVRGEFWRGLVKDARERNLYTDGD 1808
>gi|240273304|gb|EER36825.1| helicase SEN1 [Ajellomyces capsulatus H143]
Length = 2150
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 98/209 (46%), Positives = 127/209 (60%), Gaps = 4/209 (1%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL QYRMHP I FPS FY GRL D + L ++ +L PY FFDV G S
Sbjct: 1607 LLDTQYRMHPEISRFPSAAFYDGRLKDGPDMDKLRVRPWHSSELLGPYRFFDV-QGLHSS 1665
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLG-KVTVGIITPYKLQLKCLQHEFRNVLN 120
S N+ E + + LYE L T+ M K +GIITPYK QL+ ++++F N
Sbjct: 1666 APKGHSLVNLAELRVAMKLYERL--TIDYMTYDFKGKIGIITPYKGQLREMKNQFANKYG 1723
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGN 180
+ + NT DAFQG+E +VII SCVRASN G+GF+ADIRRMNV LTRA+ +LWV+GN
Sbjct: 1724 NSIFTTVEFNTTDAFQGRECEVIIFSCVRASNRGIGFLADIRRMNVGLTRAKSSLWVLGN 1783
Query: 181 AGALTQSDDWAALIADSKARNCYMDMDSL 209
+ +L Q + W LI D+++RN Y D L
Sbjct: 1784 SQSLVQGEFWNGLIIDAQSRNLYTQGDIL 1812
>gi|302796659|ref|XP_002980091.1| hypothetical protein SELMODRAFT_444379 [Selaginella moellendorffii]
gi|300152318|gb|EFJ18961.1| hypothetical protein SELMODRAFT_444379 [Selaginella moellendorffii]
Length = 2265
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 98/203 (48%), Positives = 127/203 (62%), Gaps = 9/203 (4%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEV-YYKDPVLRPYVFFDVIHGRES 60
+LS QYRMHP IR FPS +FY +L D SV+ ++ D RPY FFDVI G+E
Sbjct: 1834 MLSTQYRMHPDIRKFPSSYFYNNQLVDGASVLGDKRRASFHNDRFFRPYTFFDVIDGQE- 1892
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQ-KTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVL 119
R G S NVDE V LYE Q K + + G++ G+ITPYK QL L+ F+
Sbjct: 1893 -RAGGSSVGNVDEVDVAVKLYERFQAKYPQEIQPGRI--GVITPYKQQLNMLKRAFQR-F 1948
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRAS--NHGVGFVADIRRMNVALTRARRALWV 177
+ L NT+D FQG+E D++I+S VRAS G+GFVADIRRMNVALTR R +LW+
Sbjct: 1949 GEKISSILEFNTIDGFQGREVDILILSTVRASLEPKGIGFVADIRRMNVALTRPRFSLWI 2008
Query: 178 MGNAGALTQSDDWAALIADSKAR 200
+G+A AL + WAAL+ D+ +R
Sbjct: 2009 IGSAMALRSNRAWAALLEDATSR 2031
>gi|392864810|gb|EAS30536.2| tRNA-splicing endonuclease [Coccidioides immitis RS]
Length = 2141
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 96/207 (46%), Positives = 126/207 (60%), Gaps = 4/207 (1%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL QYRMHP I FPS FY GRL D ++ L ++ +L PY FFDV G +
Sbjct: 1606 LLDTQYRMHPEISRFPSAAFYDGRLQDGPAMAKLRIRPWHNTELLGPYRFFDV-QGMHAS 1664
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGL-GKVTVGIITPYKLQLKCLQHEFRNVLN 120
S N+ E + + LY+ L + + GK+ GIITPYK QL+ L+ F N
Sbjct: 1665 APKGHSLVNMAELRVAMRLYDRLVQDFPTYDFAGKI--GIITPYKGQLRELKQHFANKYG 1722
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGN 180
+ K + NT DAFQG+E +VII SCVRASNHG+GF+ADIRRMNV LTRA+ +LWV+GN
Sbjct: 1723 NAIFKAVEFNTTDAFQGRECEVIIFSCVRASNHGIGFLADIRRMNVGLTRAKSSLWVLGN 1782
Query: 181 AGALTQSDDWAALIADSKARNCYMDMD 207
+ +L + + W LI D++ R Y D D
Sbjct: 1783 SQSLARGEFWRGLINDARERQLYTDGD 1809
>gi|119181373|ref|XP_001241901.1| hypothetical protein CIMG_05797 [Coccidioides immitis RS]
Length = 2066
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 96/207 (46%), Positives = 126/207 (60%), Gaps = 4/207 (1%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL QYRMHP I FPS FY GRL D ++ L ++ +L PY FFDV G +
Sbjct: 1531 LLDTQYRMHPEISRFPSAAFYDGRLQDGPAMAKLRIRPWHNTELLGPYRFFDV-QGMHAS 1589
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGL-GKVTVGIITPYKLQLKCLQHEFRNVLN 120
S N+ E + + LY+ L + + GK+ GIITPYK QL+ L+ F N
Sbjct: 1590 APKGHSLVNMAELRVAMRLYDRLVQDFPTYDFAGKI--GIITPYKGQLRELKQHFANKYG 1647
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGN 180
+ K + NT DAFQG+E +VII SCVRASNHG+GF+ADIRRMNV LTRA+ +LWV+GN
Sbjct: 1648 NAIFKAVEFNTTDAFQGRECEVIIFSCVRASNHGIGFLADIRRMNVGLTRAKSSLWVLGN 1707
Query: 181 AGALTQSDDWAALIADSKARNCYMDMD 207
+ +L + + W LI D++ R Y D D
Sbjct: 1708 SQSLARGEFWRGLINDARERQLYTDGD 1734
>gi|2340994|gb|AAB67523.1| Sen1p [Saccharomyces cerevisiae]
Length = 757
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 85/203 (41%), Positives = 126/203 (62%), Gaps = 2/203 (0%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL VQYRMHP I FPS FYQGRL D + L +++ L PY FFD+I GR+
Sbjct: 176 LLDVQYRMHPSISKFPSSEFYQGRLKDGPGMDILNKRPWHQLEPLAPYKFFDIISGRQEQ 235
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
++SY N++E + + L ++L + + +GII+PY+ Q++ ++ EF
Sbjct: 236 NAKTMSYTNMEEIRVAIELVDYLFRKFDNKIDFTGKIGIISPYREQMQKMRKEFARYFGG 295
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRA--SNHGVGFVADIRRMNVALTRARRALWVMG 179
K + NT+D FQGQE+++I++SCVRA + VGF+ D RRMNVALTRA+ ++WV+G
Sbjct: 296 MINKSIDFNTIDGFQGQEKEIILISCVRADDTKSSVGFLKDFRRMNVALTRAKTSIWVLG 355
Query: 180 NAGALTQSDDWAALIADSKARNC 202
+ +L +S W LI D+K R+C
Sbjct: 356 HQRSLAKSKLWRDLIEDAKDRSC 378
>gi|322701388|gb|EFY93138.1| putative SEN1 protein [Metarhizium acridum CQMa 102]
Length = 2082
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 110/268 (41%), Positives = 153/268 (57%), Gaps = 16/268 (5%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL +QYRMHP I FPS+ FY+G+L D + ++ L + +++ +L PY FFDV +E
Sbjct: 1625 LLDMQYRMHPEISMFPSKEFYEGQLQDGQDMLQLRQQPWHQSALLGPYRFFDVEGVQEKG 1684
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGL-GKVTVGIITPYKLQLKCLQHEFRNVLN 120
R G S N E + + +Y+ K K L GK+ GIITPYK QL E RN
Sbjct: 1685 RKGQ-SLVNTRELQVAMEIYDRFSKEYKQCDLTGKI--GIITPYKAQL----FELRNRFT 1737
Query: 121 SEEGKDLY----INTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRAL 175
S G+++ NT DAFQG+E ++II SCVRAS+ G +GF+ DIRRMNV LTRA+ +L
Sbjct: 1738 SRYGENITDIIEFNTTDAFQGRECEIIIFSCVRASSTGGIGFMTDIRRMNVGLTRAKSSL 1797
Query: 176 WVMGNAGALTQSDDWAALIADSKARNCYMDMDSLPKEFSVALAAKAPG-YGPLQGKIPHN 234
W++G++ AL Q + W LI D+KAR+ Y D L F L +P Y Q + P +
Sbjct: 1798 WILGDSRALVQGEFWKKLIEDAKARDRYTKGDIL-GMFRKPLQRASPSTYQAPQKESPED 1856
Query: 235 ARGLRSAGQRHRSFDM-NMESRSGTPSE 261
L S + + N+ES TP +
Sbjct: 1857 IEMLDSPAANTITDGVNNIESEPSTPPQ 1884
>gi|260950507|ref|XP_002619550.1| hypothetical protein CLUG_00709 [Clavispora lusitaniae ATCC 42720]
gi|238847122|gb|EEQ36586.1| hypothetical protein CLUG_00709 [Clavispora lusitaniae ATCC 42720]
Length = 1970
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 92/202 (45%), Positives = 127/202 (62%), Gaps = 3/202 (1%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL VQYRMHP I FPS FY+ +LTD ++ + ++ D L PY FFD I GR
Sbjct: 1565 LLDVQYRMHPQISKFPSAQFYKSKLTDGPHMMEKNNRPWHADFPLSPYRFFD-IGGRHQQ 1623
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
+ S+ N EAK + L E L + L + +GII+PYK Q++ L+ F +
Sbjct: 1624 NVQTKSFFNPSEAKVALELVEKLMQILPQDKF-RGRIGIISPYKEQIRTLKDTFVRKYGN 1682
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVMGN 180
++ NTVD FQGQE+++IIMSCVRAS G VGF++D+RRMNVALTRAR LW++GN
Sbjct: 1683 LILNEIDFNTVDGFQGQEKEIIIMSCVRASESGSVGFLSDVRRMNVALTRARTTLWILGN 1742
Query: 181 AGALTQSDDWAALIADSKARNC 202
+L + W+ LIAD+++R+C
Sbjct: 1743 KQSLRRDKIWSKLIADAESRDC 1764
>gi|402075170|gb|EJT70641.1| DNA-binding protein SMUBP-2 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 2075
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 99/231 (42%), Positives = 134/231 (58%), Gaps = 4/231 (1%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL QYRMHP I FPS+ FY+GRL D + + L + ++++P+L PY FFDV +E
Sbjct: 1655 LLDCQYRMHPEISLFPSKEFYEGRLADGDDMAKLRQQPWHENPLLGPYRFFDVEGIQERG 1714
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKS-MGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
G S N +E + ++ S G K +GIITPYK QL L+ F +
Sbjct: 1715 NRGQ-SLVNTNEVSVALQIFNRFSTDFSSRCGDLKGKIGIITPYKAQLHALRQRFLDRYG 1773
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRALWVMG 179
+ + NT DAFQG+E ++II SCVRAS G+GF+ DIRRMNV LTRAR +LWV+G
Sbjct: 1774 EAVLEQIEFNTTDAFQGRECEIIIFSCVRASPTGGIGFMTDIRRMNVGLTRARSSLWVLG 1833
Query: 180 NAGALTQSDDWAALIADSKARNCYMDMDSLPKEFSVALAAKAP-GYGPLQG 229
++ AL Q WA LI D+KAR+ Y + + S A + P G P+Q
Sbjct: 1834 DSRALKQGPFWAKLIEDAKARDRYTSGSIMAQLRSAATSRPMPMGAVPMQA 1884
>gi|207342692|gb|EDZ70377.1| YLR430Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 955
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 85/203 (41%), Positives = 126/203 (62%), Gaps = 2/203 (0%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL VQYRMHP I FPS FYQGRL D + L +++ L PY FFD+I GR+
Sbjct: 609 LLDVQYRMHPSISKFPSSEFYQGRLKDGPGMDILNKRPWHQLEPLAPYKFFDIISGRQEQ 668
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
++SY N++E + + L ++L + + +GII+PY+ Q++ ++ EF
Sbjct: 669 NAKTMSYTNMEEIRVAIELVDYLFRKFDNKIDFTGKIGIISPYREQMQKMRKEFARYFGG 728
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRA--SNHGVGFVADIRRMNVALTRARRALWVMG 179
K + NT+D FQGQE+++I++SCVRA + VGF+ D RRMNVALTRA+ ++WV+G
Sbjct: 729 MINKSIDFNTIDGFQGQEKEIILISCVRADDTKSSVGFLKDFRRMNVALTRAKTSIWVLG 788
Query: 180 NAGALTQSDDWAALIADSKARNC 202
+ +L +S W LI D+K R+C
Sbjct: 789 HQRSLAKSKLWRDLIEDAKDRSC 811
>gi|425771573|gb|EKV10011.1| tRNA-splicing endonuclease, putative [Penicillium digitatum Pd1]
Length = 2154
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 92/206 (44%), Positives = 124/206 (60%), Gaps = 2/206 (0%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL +QYRMHP I FPS FY G+L D + L +++ +L PY FFDV G S
Sbjct: 1614 LLDIQYRMHPAISHFPSVTFYDGKLQDGPDMAKLRQRPWHQSELLSPYRFFDV-QGMHSS 1672
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
S N E + + LY+ L +K +GIITPYK QL+ L+++F
Sbjct: 1673 AARGHSLINYAELQVAMQLYDRLITDVKEYDFAG-KIGIITPYKGQLRELKNQFTQRYGE 1731
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGNA 181
+ + + NT DAFQG+E +VII SCVRASN G+GF+ADIRRMNV LTRA+ +LWV+GN+
Sbjct: 1732 DILRKVDFNTTDAFQGRESEVIIFSCVRASNKGIGFLADIRRMNVGLTRAKSSLWVLGNS 1791
Query: 182 GALTQSDDWAALIADSKARNCYMDMD 207
+L Q W LI +++ RN Y + D
Sbjct: 1792 QSLEQGQFWNGLIKNARERNVYTEGD 1817
>gi|425777077|gb|EKV15267.1| tRNA-splicing endonuclease, putative [Penicillium digitatum PHI26]
Length = 2154
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 92/206 (44%), Positives = 124/206 (60%), Gaps = 2/206 (0%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL +QYRMHP I FPS FY G+L D + L +++ +L PY FFDV G S
Sbjct: 1614 LLDIQYRMHPAISHFPSVTFYDGKLQDGPDMAKLRQRPWHQSELLSPYRFFDV-QGMHSS 1672
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
S N E + + LY+ L +K +GIITPYK QL+ L+++F
Sbjct: 1673 AARGHSLINYAELQVAMQLYDRLITDVKEYDFAG-KIGIITPYKGQLRELKNQFTQRYGE 1731
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGNA 181
+ + + NT DAFQG+E +VII SCVRASN G+GF+ADIRRMNV LTRA+ +LWV+GN+
Sbjct: 1732 DILRKVDFNTTDAFQGRESEVIIFSCVRASNKGIGFLADIRRMNVGLTRAKSSLWVLGNS 1791
Query: 182 GALTQSDDWAALIADSKARNCYMDMD 207
+L Q W LI +++ RN Y + D
Sbjct: 1792 QSLEQGQFWNGLIKNARERNVYTEGD 1817
>gi|367012806|ref|XP_003680903.1| hypothetical protein TDEL_0D01080 [Torulaspora delbrueckii]
gi|359748563|emb|CCE91692.1| hypothetical protein TDEL_0D01080 [Torulaspora delbrueckii]
Length = 2068
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 86/203 (42%), Positives = 125/203 (61%), Gaps = 2/203 (0%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL VQYRMHP I FPS FY GRL D V L ++K+ L PY FFD++ G+ES
Sbjct: 1610 LLDVQYRMHPAISKFPSAEFYNGRLKDGPDVEILNIRPWHKNAPLTPYRFFDIVTGKESQ 1669
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
S+SY N +E + + L E+L + +G+I+PYK Q ++ +FR+ +
Sbjct: 1670 NAKSMSYVNTEEIRVAIELVENLVNKYERELDFSGKIGVISPYKEQAMTMRRQFRSHFGA 1729
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRA--SNHGVGFVADIRRMNVALTRARRALWVMG 179
+ + NT+D FQGQE+++II+SCVRA S VGF+ D RRMNVALTRA+ ++W++G
Sbjct: 1730 SIAQYVDFNTIDGFQGQEKEIIIISCVRADDSKTSVGFLRDFRRMNVALTRAKTSMWILG 1789
Query: 180 NAGALTQSDDWAALIADSKARNC 202
+ +L ++ W LI D++ R C
Sbjct: 1790 HQKSLVKNKLWRNLITDAQGRGC 1812
>gi|172574|gb|AAB63976.1| SEN1 [Saccharomyces cerevisiae]
Length = 2112
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 85/203 (41%), Positives = 126/203 (62%), Gaps = 2/203 (0%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL VQYRMHP I FPS FYQGRL D + L +++ L PY FFD+I GR+
Sbjct: 1531 LLDVQYRMHPSISKFPSSEFYQGRLKDGPGMDILNKRPWHQLEPLAPYKFFDIISGRQEQ 1590
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
++SY N++E + + L ++L + + +GII+PY+ Q++ ++ EF
Sbjct: 1591 NAKTMSYTNMEEIRVAIELVDYLFRKFDNKIDFTGKIGIISPYREQMQKMRKEFARYFGG 1650
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRA--SNHGVGFVADIRRMNVALTRARRALWVMG 179
K + NT+D FQGQE+++I++SCVRA + VGF+ D RRMNVALTRA+ ++WV+G
Sbjct: 1651 MINKSIDFNTIDGFQGQEKEIILISCVRADDTKSSVGFLKDFRRMNVALTRAKTSIWVLG 1710
Query: 180 NAGALTQSDDWAALIADSKARNC 202
+ +L +S W LI D+K R+C
Sbjct: 1711 HQRSLAKSKLWRDLIEDAKDRSC 1733
>gi|365764213|gb|EHN05738.1| Sen1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 2101
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 85/203 (41%), Positives = 126/203 (62%), Gaps = 2/203 (0%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL VQYRMHP I FPS FYQGRL D + L +++ L PY FFD+I GR+
Sbjct: 1520 LLDVQYRMHPSISKFPSSEFYQGRLKDGPGMDILNKRPWHQLEPLAPYKFFDIISGRQEQ 1579
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
++SY N++E + + L ++L + + +GII+PY+ Q++ ++ EF
Sbjct: 1580 NAKTMSYTNMEEIRVAIELVDYLFRKFDNKIDFTGKIGIISPYREQMQKMRKEFARYFGG 1639
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRA--SNHGVGFVADIRRMNVALTRARRALWVMG 179
K + NT+D FQGQE+++I++SCVRA + VGF+ D RRMNVALTRA+ ++WV+G
Sbjct: 1640 MINKSIDFNTIDGFQGQEKEIILISCVRADDTKSSVGFLKDFRRMNVALTRAKTSIWVLG 1699
Query: 180 NAGALTQSDDWAALIADSKARNC 202
+ +L +S W LI D+K R+C
Sbjct: 1700 HQRSLAKSKLWRDLIEDAKDRSC 1722
>gi|349580123|dbj|GAA25284.1| K7_Sen1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 2233
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 85/203 (41%), Positives = 126/203 (62%), Gaps = 2/203 (0%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL VQYRMHP I FPS FYQGRL D + L +++ L PY FFD+I GR+
Sbjct: 1652 LLDVQYRMHPSISKFPSSEFYQGRLKDGPGMDILNKRPWHQLEPLAPYKFFDIISGRQEQ 1711
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
++SY N++E + + L ++L + + +GII+PY+ Q++ ++ EF
Sbjct: 1712 NAKTMSYTNMEEIRVAIELVDYLFRKFDNKIDFTGKIGIISPYREQMQKMRKEFARYFGG 1771
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRA--SNHGVGFVADIRRMNVALTRARRALWVMG 179
K + NT+D FQGQE+++I++SCVRA + VGF+ D RRMNVALTRA+ ++WV+G
Sbjct: 1772 MINKSIDFNTIDGFQGQEKEIILISCVRADDTKSSVGFLKDFRRMNVALTRAKTSIWVLG 1831
Query: 180 NAGALTQSDDWAALIADSKARNC 202
+ +L +S W LI D+K R+C
Sbjct: 1832 HQRSLAKSKLWRDLIEDAKDRSC 1854
>gi|256271104|gb|EEU06199.1| Sen1p [Saccharomyces cerevisiae JAY291]
Length = 2231
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 85/203 (41%), Positives = 126/203 (62%), Gaps = 2/203 (0%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL VQYRMHP I FPS FYQGRL D + L +++ L PY FFD+I GR+
Sbjct: 1650 LLDVQYRMHPSISKFPSSEFYQGRLKDGPGMDILNKRPWHQLEPLAPYKFFDIISGRQEQ 1709
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
++SY N++E + + L ++L + + +GII+PY+ Q++ ++ EF
Sbjct: 1710 NAKTMSYTNMEEIRVAIELVDYLFRKFDNKIDFTGKIGIISPYREQMQKMRKEFARYFGG 1769
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRA--SNHGVGFVADIRRMNVALTRARRALWVMG 179
K + NT+D FQGQE+++I++SCVRA + VGF+ D RRMNVALTRA+ ++WV+G
Sbjct: 1770 MINKSIDFNTIDGFQGQEKEIILISCVRADDTKSSVGFLKDFRRMNVALTRAKTSIWVLG 1829
Query: 180 NAGALTQSDDWAALIADSKARNC 202
+ +L +S W LI D+K R+C
Sbjct: 1830 HQRSLAKSKLWRDLIEDAKDRSC 1852
>gi|302921016|ref|XP_003053198.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256734138|gb|EEU47485.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 2035
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 101/225 (44%), Positives = 137/225 (60%), Gaps = 8/225 (3%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRE-S 60
LL +QYRMHP I FPSR FY+G+L D +++ L + ++K +L PY FFDV +E
Sbjct: 1634 LLDMQYRMHPEISMFPSREFYEGQLADGQNMHELRQQPWHKSALLGPYRFFDVQGVQERG 1693
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGL-GKVTVGIITPYKLQLKCLQHEFRNVL 119
HRG S+ N E + LY+ K + L GK+ GIITPYK QL L++ FR+
Sbjct: 1694 HRGQSLV--NTKELDVAMQLYDRFSKEYQQCDLTGKI--GIITPYKAQLYELRNRFRSRY 1749
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVM 178
+ NT DAFQG+E ++II SCVRAS+ G +GF+ DIRRMNV LTRA+ +LW++
Sbjct: 1750 GEAITNIIEFNTTDAFQGRECEIIIFSCVRASSTGGIGFMTDIRRMNVGLTRAKSSLWIL 1809
Query: 179 GNAGALTQSDDWAALIADSKARNCYMDMDSLPKEFSVALAAKAPG 223
G++ AL Q + W LI D++AR+ Y D L F L PG
Sbjct: 1810 GDSRALVQGEFWRKLIEDAQARDRYTKGDIL-NMFRRPLEKAKPG 1853
>gi|225678137|gb|EEH16421.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 2216
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 93/208 (44%), Positives = 123/208 (59%), Gaps = 2/208 (0%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL QYRMHP I FPS FY GRL D + L +++K +L PY FFDV G S
Sbjct: 1623 LLDTQYRMHPEISRFPSAAFYDGRLQDGPDMDKLRSRIWHKSELLGPYRFFDV-QGLHSS 1681
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
S N+ E + + LYE L K +GIITPYK QL+ ++++F N S
Sbjct: 1682 APKGHSLVNLAEVRVAMKLYERLTTDFKIYDFTN-KIGIITPYKGQLREMKNQFANKYGS 1740
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGNA 181
+ NT DAFQG+E ++II SCVRAS+ G+GF+ADIRRMNV LTRA+ +LWV+G++
Sbjct: 1741 SIFTMIEFNTTDAFQGRECEIIIFSCVRASDRGIGFLADIRRMNVGLTRAKSSLWVLGSS 1800
Query: 182 GALTQSDDWAALIADSKARNCYMDMDSL 209
+L Q + W LI+D+ R D L
Sbjct: 1801 KSLVQGEFWRGLISDAHTRKLVTQGDIL 1828
>gi|259148407|emb|CAY81654.1| Sen1p [Saccharomyces cerevisiae EC1118]
Length = 2230
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 85/203 (41%), Positives = 126/203 (62%), Gaps = 2/203 (0%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL VQYRMHP I FPS FYQGRL D + L +++ L PY FFD+I GR+
Sbjct: 1649 LLDVQYRMHPSISKFPSSEFYQGRLKDGPGMDILNKRPWHQLEPLAPYKFFDIISGRQEQ 1708
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
++SY N++E + + L ++L + + +GII+PY+ Q++ ++ EF
Sbjct: 1709 NAKTMSYTNMEEIRVAIELVDYLFRKFDNKIDFTGKIGIISPYREQMQKMRKEFARYFGG 1768
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRA--SNHGVGFVADIRRMNVALTRARRALWVMG 179
K + NT+D FQGQE+++I++SCVRA + VGF+ D RRMNVALTRA+ ++WV+G
Sbjct: 1769 MINKSIDFNTIDGFQGQEKEIILISCVRADDTKSSVGFLKDFRRMNVALTRAKTSIWVLG 1828
Query: 180 NAGALTQSDDWAALIADSKARNC 202
+ +L +S W LI D+K R+C
Sbjct: 1829 HQRSLAKSKLWRDLIEDAKDRSC 1851
>gi|398366241|ref|NP_013534.3| putative DNA/RNA helicase SEN1 [Saccharomyces cerevisiae S288c]
gi|3123282|sp|Q00416.2|SEN1_YEAST RecName: Full=Helicase SEN1; AltName: Full=tRNA-splicing endonuclease
positive effector
gi|664872|gb|AAB67502.1| Sen1p [Saccharomyces cerevisiae]
gi|285813835|tpg|DAA09731.1| TPA: putative DNA/RNA helicase SEN1 [Saccharomyces cerevisiae S288c]
gi|392297931|gb|EIW09030.1| Sen1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 2231
Score = 174 bits (440), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 85/203 (41%), Positives = 126/203 (62%), Gaps = 2/203 (0%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL VQYRMHP I FPS FYQGRL D + L +++ L PY FFD+I GR+
Sbjct: 1650 LLDVQYRMHPSISKFPSSEFYQGRLKDGPGMDILNKRPWHQLEPLAPYKFFDIISGRQEQ 1709
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
++SY N++E + + L ++L + + +GII+PY+ Q++ ++ EF
Sbjct: 1710 NAKTMSYTNMEEIRVAIELVDYLFRKFDNKIDFTGKIGIISPYREQMQKMRKEFARYFGG 1769
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRA--SNHGVGFVADIRRMNVALTRARRALWVMG 179
K + NT+D FQGQE+++I++SCVRA + VGF+ D RRMNVALTRA+ ++WV+G
Sbjct: 1770 MINKSIDFNTIDGFQGQEKEIILISCVRADDTKSSVGFLKDFRRMNVALTRAKTSIWVLG 1829
Query: 180 NAGALTQSDDWAALIADSKARNC 202
+ +L +S W LI D+K R+C
Sbjct: 1830 HQRSLAKSKLWRDLIEDAKDRSC 1852
>gi|190405466|gb|EDV08733.1| nuclear-localized tRNA splicing complex component [Saccharomyces
cerevisiae RM11-1a]
Length = 2231
Score = 174 bits (440), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 85/203 (41%), Positives = 126/203 (62%), Gaps = 2/203 (0%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL VQYRMHP I FPS FYQGRL D + L +++ L PY FFD+I GR+
Sbjct: 1650 LLDVQYRMHPSISKFPSSEFYQGRLKDGPGMDILNKRPWHQLEPLAPYKFFDIISGRQEQ 1709
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
++SY N++E + + L ++L + + +GII+PY+ Q++ ++ EF
Sbjct: 1710 NAKTMSYTNMEEIRVAIELVDYLFRKFDNKIDFTGKIGIISPYREQMQKMRKEFARYFGG 1769
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRA--SNHGVGFVADIRRMNVALTRARRALWVMG 179
K + NT+D FQGQE+++I++SCVRA + VGF+ D RRMNVALTRA+ ++WV+G
Sbjct: 1770 MINKSIDFNTIDGFQGQEKEIILISCVRADDTKSSVGFLKDFRRMNVALTRAKTSIWVLG 1829
Query: 180 NAGALTQSDDWAALIADSKARNC 202
+ +L +S W LI D+K R+C
Sbjct: 1830 HQRSLAKSKLWRDLIEDAKDRSC 1852
>gi|361125646|gb|EHK97679.1| putative Helicase SEN1 [Glarea lozoyensis 74030]
Length = 1377
Score = 174 bits (440), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 92/204 (45%), Positives = 128/204 (62%), Gaps = 6/204 (2%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL QYRMHP I FPS+ FY+GRL D + + L + ++ +L PY FFDV G ++
Sbjct: 1043 LLDTQYRMHPDISSFPSQQFYKGRLLDGDGMAKLRRQAWHASTILGPYRFFDV-EGVQTQ 1101
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGL-GKVTVGIITPYKLQLKCLQHEFRNVLN 120
G S+ NV E + LY+ L+ +++ GK+ GIIT YK QL L+ F+N
Sbjct: 1102 -GAGHSFINVPELNAAMQLYQRLKTDYQNIDFTGKI--GIITTYKAQLNALKDRFQNRFG 1158
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRA-SNHGVGFVADIRRMNVALTRARRALWVMG 179
++ NT DAFQG+ER++II SCVRA S G+GF++DIRRMNV LTRA+ +LWV+G
Sbjct: 1159 ESIFNEIEFNTTDAFQGREREIIIFSCVRAKSTGGIGFLSDIRRMNVGLTRAKSSLWVLG 1218
Query: 180 NAGALTQSDDWAALIADSKARNCY 203
++ +L Q + W LI D+K R Y
Sbjct: 1219 DSRSLRQGEFWNKLIEDAKTRKKY 1242
>gi|378730540|gb|EHY56999.1| senataxin [Exophiala dermatitidis NIH/UT8656]
Length = 2264
Score = 174 bits (440), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 94/209 (44%), Positives = 122/209 (58%), Gaps = 4/209 (1%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL QYRMHP I FPS+ FY RL D + L +++ + PY FFDV G
Sbjct: 1613 LLDTQYRMHPAISLFPSKTFYDSRLKDGADMAKLRRRPWHQSDLFAPYRFFDV-QGMSQA 1671
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGL-GKVTVGIITPYKLQLKCLQHEFRNVLN 120
S N+ E + LY+ L K + GK+ G+ITPYK QLK L+ F
Sbjct: 1672 APKGHSLVNIAELNVAMQLYDRLVKDVPKYDFAGKI--GVITPYKGQLKELKLRFTQRYG 1729
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGN 180
+ + NT DAFQG+E ++II SCVRAS HG+GF+ DIRRMNV LTRA+ +LWV+GN
Sbjct: 1730 QDITSKIEFNTTDAFQGRESEIIIFSCVRASTHGIGFLNDIRRMNVGLTRAKSSLWVLGN 1789
Query: 181 AGALTQSDDWAALIADSKARNCYMDMDSL 209
+ +L Q + W AL+ D+KARN Y D L
Sbjct: 1790 SQSLMQGEYWRALVNDAKARNVYTHGDIL 1818
>gi|255951120|ref|XP_002566327.1| Pc22g24390 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211593344|emb|CAP99727.1| Pc22g24390 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 2167
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 95/209 (45%), Positives = 127/209 (60%), Gaps = 4/209 (1%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL VQYRMHP I FPS FY G+L D + L +++ +L PY FFDV G S
Sbjct: 1614 LLDVQYRMHPAISHFPSVTFYDGKLQDGPDMATLRQRPWHQSELLGPYRFFDV-QGMHSS 1672
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGL-GKVTVGIITPYKLQLKCLQHEFRNVLN 120
S N E + + LY+ L +K GK+ GIITPYK QL+ L+++F
Sbjct: 1673 AVRGHSLVNYAELQVAMRLYDRLITDVKEYDFAGKI--GIITPYKGQLRELKNQFTQRYG 1730
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGN 180
+ + + NT DAFQG+E +VII SCVRASN G+GF+ADIRRMNV LTRA+ +LWV+GN
Sbjct: 1731 EDILRKVDFNTTDAFQGRESEVIIFSCVRASNKGIGFLADIRRMNVGLTRAKSSLWVLGN 1790
Query: 181 AGALTQSDDWAALIADSKARNCYMDMDSL 209
+ +L Q W LI +++ RN Y + D +
Sbjct: 1791 SQSLEQGQFWNGLIKNARERNVYTEGDIM 1819
>gi|302789261|ref|XP_002976399.1| hypothetical protein SELMODRAFT_30768 [Selaginella moellendorffii]
gi|300156029|gb|EFJ22659.1| hypothetical protein SELMODRAFT_30768 [Selaginella moellendorffii]
Length = 766
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 92/201 (45%), Positives = 123/201 (61%), Gaps = 3/201 (1%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
+L+ QYRMHP IRDFPS+ FY L D V +++ P+ FFD I GRE+
Sbjct: 501 MLNTQYRMHPQIRDFPSKEFYGEALEDGAEVEQQTSRAWHEYCCFGPFAFFD-IEGRETQ 559
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
GS SY N DEA+F + LY HL + G V +I+PYK Q+ L+ F VL
Sbjct: 560 PPGSGSYINSDEAEFVLVLYRHLIALYPELK-GGPHVAVISPYKYQVTTLRTRFAEVLGK 618
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRALWVMGN 180
+ + + INTVD FQG+E+D+ I SCVRA+ + G+GFV+D RRMNV LTRAR ++ V+G
Sbjct: 619 DAARLIDINTVDGFQGREKDIAIFSCVRANKSKGIGFVSDFRRMNVGLTRARASMLVVGC 678
Query: 181 AGALTQSDDWAALIADSKARN 201
A AL Q + W LI ++ RN
Sbjct: 679 AAALRQDEHWGNLIKHAQQRN 699
>gi|68465577|ref|XP_723150.1| potential nuclear RNA processing factor [Candida albicans SC5314]
gi|68465870|ref|XP_723003.1| potential nuclear RNA processing factor [Candida albicans SC5314]
gi|46445015|gb|EAL04286.1| potential nuclear RNA processing factor [Candida albicans SC5314]
gi|46445171|gb|EAL04441.1| potential nuclear RNA processing factor [Candida albicans SC5314]
Length = 2018
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 89/203 (43%), Positives = 127/203 (62%), Gaps = 5/203 (2%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
+L VQYRMHP I FPS FY +L D + ++ L ++KDP L PY FFD++ G+
Sbjct: 1603 MLDVQYRMHPMISKFPSSEFYNSKLKDGDGMLELNTRPWHKDPPLTPYRFFDIL-GKHEK 1661
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGL-GKVTVGIITPYKLQLKCLQHEFRNVLN 120
+ S N DEA + L + L + L GK+ GII+PYK Q++ ++ F
Sbjct: 1662 NELTRSLFNTDEAIVALQLTDKLMQLLPQDKFSGKI--GIISPYKEQIRKIKEVFVRKYG 1719
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVMG 179
++ NTVD FQGQE+++IIMSCVRAS G VGF++D+RRMNVALTRA+ LW++G
Sbjct: 1720 KPILDEIDFNTVDGFQGQEKEIIIMSCVRASATGNVGFLSDVRRMNVALTRAKTTLWILG 1779
Query: 180 NAGALTQSDDWAALIADSKARNC 202
N +L++++ W L+ D+ RNC
Sbjct: 1780 NKDSLSRNEVWKKLLTDAGERNC 1802
>gi|358385072|gb|EHK22669.1| hypothetical protein TRIVIDRAFT_191377 [Trichoderma virens Gv29-8]
Length = 2021
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 104/275 (37%), Positives = 144/275 (52%), Gaps = 4/275 (1%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL +QYRMHP I FPSR FY+ +L D + ++ L ++KD + PY FFDV +E
Sbjct: 1636 LLDMQYRMHPEISSFPSREFYESQLQDGQDMLQLRQAPWHKDTLFAPYRFFDVEGVQEKG 1695
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
R G S N E + + +YE + L + +GIITPYK QL L+ F+
Sbjct: 1696 RKGQ-SLVNTRELEVALQMYERFSRDYHECDLTR-KIGIITPYKAQLYELRSRFQARYGE 1753
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRALWVMGN 180
+ NT DAFQG+E ++II SCVRAS G+GF+ DIRRMNV LTRA+ +LW++G+
Sbjct: 1754 NITNIIEFNTTDAFQGRECEIIIFSCVRASATGGIGFMTDIRRMNVGLTRAKSSLWILGD 1813
Query: 181 AGALTQSDDWAALIADSKARNCYMDMDSLPKEFSVALAAKAPGYGPLQGKIPHNARGLRS 240
+ AL Q + W LI D++ R+ Y D L AK Y P G+ A
Sbjct: 1814 SRALVQGEFWRKLIVDAQDRDRYTKGDILSMFRRPLEKAKPNAYTPSSGRSSAVATPTNP 1873
Query: 241 AGQRHRSFDMNMESRS-GTPSEDDEKVSRNGNYRP 274
+ D+ M S P++ S +GN P
Sbjct: 1874 PQPPPQQMDIVMRDASRNDPADATPSASNSGNPGP 1908
>gi|159122655|gb|EDP47776.1| tRNA-splicing endonuclease, putative [Aspergillus fumigatus A1163]
Length = 2076
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 95/209 (45%), Positives = 126/209 (60%), Gaps = 4/209 (1%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL QYRMHP I +PS FY G+L D ++ L +++ +L PY FFDV G +
Sbjct: 1609 LLDTQYRMHPEISVYPSAAFYDGKLKDGPNMAKLRARPWHQSELLGPYRFFDV-QGLHQN 1667
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGL-GKVTVGIITPYKLQLKCLQHEFRNVLN 120
S N+ E + + LYE L + GK+ GIITPYK QL+ L+ +F
Sbjct: 1668 TTKGHSLINLAELRVAMQLYERLITDFREYDFSGKI--GIITPYKGQLRELKTQFAARYG 1725
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGN 180
+ + NT DAFQG+E +VII SCVRASN G+GF+ADIRRMNV LTRA+ +LWV+GN
Sbjct: 1726 NAIFNMVDFNTTDAFQGRESEVIIFSCVRASNKGIGFLADIRRMNVGLTRAKSSLWVLGN 1785
Query: 181 AGALTQSDDWAALIADSKARNCYMDMDSL 209
+ +L Q + W LI D++ RN Y D D L
Sbjct: 1786 SQSLVQGEFWNGLIKDARRRNVYTDGDIL 1814
>gi|70984729|ref|XP_747871.1| tRNA-splicing endonuclease [Aspergillus fumigatus Af293]
gi|66845498|gb|EAL85833.1| tRNA-splicing endonuclease, putative [Aspergillus fumigatus Af293]
Length = 2076
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 95/209 (45%), Positives = 126/209 (60%), Gaps = 4/209 (1%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL QYRMHP I +PS FY G+L D ++ L +++ +L PY FFDV G +
Sbjct: 1609 LLDTQYRMHPEISVYPSAAFYDGKLKDGPNMAKLRARPWHQSELLGPYRFFDV-QGLHQN 1667
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGL-GKVTVGIITPYKLQLKCLQHEFRNVLN 120
S N+ E + + LYE L + GK+ GIITPYK QL+ L+ +F
Sbjct: 1668 TTKGHSLINLAELRVAMQLYERLITDFREYDFSGKI--GIITPYKGQLRELKTQFAARYG 1725
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGN 180
+ + NT DAFQG+E +VII SCVRASN G+GF+ADIRRMNV LTRA+ +LWV+GN
Sbjct: 1726 NAIFNMVDFNTTDAFQGRESEVIIFSCVRASNKGIGFLADIRRMNVGLTRAKSSLWVLGN 1785
Query: 181 AGALTQSDDWAALIADSKARNCYMDMDSL 209
+ +L Q + W LI D++ RN Y D D L
Sbjct: 1786 SQSLVQGEFWNGLIKDARRRNVYTDGDIL 1814
>gi|226287635|gb|EEH43148.1| DEAD-box type RNA helicase [Paracoccidioides brasiliensis Pb18]
Length = 2162
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 93/208 (44%), Positives = 122/208 (58%), Gaps = 2/208 (0%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL QYRMHP I FPS FY GRL D + L +++K +L PY FFDV G S
Sbjct: 1623 LLDTQYRMHPEISRFPSAAFYDGRLQDGPDMDKLRSRIWHKSELLGPYRFFDV-QGLHSS 1681
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
S N+ E + + LYE L K +GIITPYK QL+ ++++F N S
Sbjct: 1682 APKGHSLVNLAEVRVAMKLYERLTTDFKIYDFTN-KIGIITPYKGQLREMKNQFANKYGS 1740
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGNA 181
+ NT DAFQG+E ++II SCVRAS+ G+GF+ADIRRMNV LTRA+ +LWV+G++
Sbjct: 1741 SIFTMIEFNTTDAFQGRECEIIIFSCVRASDRGIGFLADIRRMNVGLTRAKSSLWVLGSS 1800
Query: 182 GALTQSDDWAALIADSKARNCYMDMDSL 209
+L Q + W LI D+ R D L
Sbjct: 1801 KSLVQGEFWRGLINDAHTRKLVTQGDIL 1828
>gi|322709665|gb|EFZ01241.1| putative SEN1 protein [Metarhizium anisopliae ARSEF 23]
Length = 2049
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 97/214 (45%), Positives = 133/214 (62%), Gaps = 13/214 (6%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL +QYRMHP I FPS+ FY+G+L D + ++ L + +++ +L PY FFDV +E
Sbjct: 1640 LLDMQYRMHPEISMFPSKEFYEGQLQDGQDMLQLRHQPWHQSALLGPYRFFDVEGVQEKG 1699
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGL-GKVTVGIITPYKLQLKCLQHEFRNVLN 120
R G S N E + + +Y+ K K L GK+ GIITPYK QL E RN
Sbjct: 1700 RKGQ-SLVNTRELQVAMEMYDRFSKEYKQCDLTGKI--GIITPYKAQL----FELRNRFT 1752
Query: 121 SEEGKDLY----INTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRAL 175
S G+++ NT DAFQG+E ++II SCVRAS+ G +GF+ DIRRMNV LTRA+ +L
Sbjct: 1753 SRYGENITDIIEFNTTDAFQGRECEIIIFSCVRASSTGGIGFMTDIRRMNVGLTRAKSSL 1812
Query: 176 WVMGNAGALTQSDDWAALIADSKARNCYMDMDSL 209
W++G++ AL Q + W LI D+KAR+ Y D L
Sbjct: 1813 WILGDSRALVQGEFWKKLIEDAKARDRYTKGDIL 1846
>gi|302811082|ref|XP_002987231.1| hypothetical protein SELMODRAFT_125376 [Selaginella moellendorffii]
gi|300145128|gb|EFJ11807.1| hypothetical protein SELMODRAFT_125376 [Selaginella moellendorffii]
Length = 820
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 101/232 (43%), Positives = 134/232 (57%), Gaps = 9/232 (3%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
+L+ QYRMHP IRDFPS+ FY L D V +++ P+ FFD I GRE+
Sbjct: 545 MLNTQYRMHPQIRDFPSKEFYGEALEDGAEVEQQTSRAWHEYCCFGPFAFFD-IEGRETQ 603
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
GS SY N DEA+F + LY HL + G V +I+PYK Q+ L+ F VL
Sbjct: 604 PPGSGSYINSDEAEFVLVLYRHLIALYPELK-GGPHVAVISPYKHQVTTLRTRFAEVLGK 662
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRALWVMGN 180
+ + + INTVD FQG+E+D+ I SCVRA+ + G+GFV+D RRMNV LTRAR ++ V+G
Sbjct: 663 DAARLIDINTVDGFQGREKDIAIFSCVRANKSKGIGFVSDFRRMNVGLTRARASMLVVGC 722
Query: 181 AGALTQSDDWAALIADSKARNCYMDMDSLP-----KEFSVALAAKAPGYGPL 227
A AL Q + W LI ++ RN + P E S+A A K GPL
Sbjct: 723 AAALRQDEHWGNLIKHAQQRNRMFKVVQKPYHALFNEASLA-ATKKMSDGPL 773
>gi|238880881|gb|EEQ44519.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 2018
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 89/203 (43%), Positives = 127/203 (62%), Gaps = 5/203 (2%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
+L VQYRMHP I FPS FY +L D + ++ L ++KDP L PY FFD++ G+
Sbjct: 1603 MLDVQYRMHPMISKFPSSEFYNSKLKDGDGMLELNTRPWHKDPPLTPYRFFDIL-GKHEK 1661
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGL-GKVTVGIITPYKLQLKCLQHEFRNVLN 120
+ S N DEA + L + L + L GK+ GII+PYK Q++ ++ F
Sbjct: 1662 NELTRSLFNTDEAIVALQLTDKLMQLLPQDRFSGKI--GIISPYKEQIRKIKEVFVRKYG 1719
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVMG 179
++ NTVD FQGQE+++IIMSCVRAS G VGF++D+RRMNVALTRA+ LW++G
Sbjct: 1720 KPILDEIDFNTVDGFQGQEKEIIIMSCVRASATGNVGFLSDVRRMNVALTRAKTTLWILG 1779
Query: 180 NAGALTQSDDWAALIADSKARNC 202
N +L++++ W L+ D+ RNC
Sbjct: 1780 NKDSLSRNEVWKKLLTDAGERNC 1802
>gi|151940946|gb|EDN59328.1| splicing endonuclease [Saccharomyces cerevisiae YJM789]
Length = 2232
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 84/203 (41%), Positives = 125/203 (61%), Gaps = 2/203 (0%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL VQYRMHP I FPS FYQGRL D + L +++ PY FFD+I GR+
Sbjct: 1651 LLDVQYRMHPSISKFPSSEFYQGRLKDGPGMDILNKRPWHQLEPFAPYKFFDIISGRQEQ 1710
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
++SY N++E + + L ++L + + +GII+PY+ Q++ ++ EF
Sbjct: 1711 NAKTMSYTNMEEIRVAIELVDYLFRKFDNKIDFTGKIGIISPYREQMQKMRKEFARYFGG 1770
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRA--SNHGVGFVADIRRMNVALTRARRALWVMG 179
K + NT+D FQGQE+++I++SCVRA + VGF+ D RRMNVALTRA+ ++WV+G
Sbjct: 1771 MINKSIDFNTIDGFQGQEKEIILISCVRADDTKSSVGFLKDFRRMNVALTRAKTSIWVLG 1830
Query: 180 NAGALTQSDDWAALIADSKARNC 202
+ +L +S W LI D+K R+C
Sbjct: 1831 HQRSLAKSKLWRDLIEDAKDRSC 1853
>gi|342873257|gb|EGU75464.1| hypothetical protein FOXB_14012 [Fusarium oxysporum Fo5176]
Length = 2080
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 98/225 (43%), Positives = 137/225 (60%), Gaps = 8/225 (3%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRE-S 60
LL +QYRMHP I FPSR FY+G+L D +++ L + ++K +L PY FFDV +E
Sbjct: 1659 LLDMQYRMHPEISLFPSREFYEGQLADGQNMHELRQQPWHKSALLGPYRFFDVQGVQERG 1718
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGL-GKVTVGIITPYKLQLKCLQHEFRNVL 119
H+G S+ N E + +Y+ + L GK+ GIITPYK QL L++ FR+
Sbjct: 1719 HKGQSLV--NTKELDVAIQMYDRFSNEYRECDLTGKI--GIITPYKAQLYELRNRFRSRY 1774
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVM 178
+ NT DAFQG+E ++II SCVRAS+ G +GF+ DIRRMNV LTRA+ +LW++
Sbjct: 1775 GENITSIIEFNTTDAFQGRECEIIIFSCVRASSTGGIGFMTDIRRMNVGLTRAKSSLWIL 1834
Query: 179 GNAGALTQSDDWAALIADSKARNCYMDMDSLPKEFSVALAAKAPG 223
G++ AL Q + W LI D++AR+ Y + D L F L PG
Sbjct: 1835 GDSRALVQGEFWRKLIEDAQARDRYTNGDVL-SMFRKPLEKAKPG 1878
>gi|119467162|ref|XP_001257387.1| tRNA-splicing endonuclease, putative [Neosartorya fischeri NRRL 181]
gi|119405539|gb|EAW15490.1| tRNA-splicing endonuclease, putative [Neosartorya fischeri NRRL 181]
Length = 2076
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 95/209 (45%), Positives = 126/209 (60%), Gaps = 4/209 (1%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL QYRMHP I +PS FY G+L D ++ L +++ +L PY FFDV G +
Sbjct: 1609 LLDTQYRMHPEISVYPSAAFYDGKLKDGPNMAKLRARPWHQSELLGPYRFFDV-QGLHQN 1667
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGL-GKVTVGIITPYKLQLKCLQHEFRNVLN 120
S N+ E + + LYE L + GK+ GIITPYK QL+ L+ +F
Sbjct: 1668 TTKGHSLINLAELRVAMQLYERLISDFRDYDFSGKI--GIITPYKGQLRELKTQFAARYG 1725
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGN 180
+ + NT DAFQG+E +VII SCVRASN G+GF+ADIRRMNV LTRA+ +LWV+GN
Sbjct: 1726 NSIFNMVDFNTTDAFQGRESEVIIFSCVRASNKGIGFLADIRRMNVGLTRAKSSLWVLGN 1785
Query: 181 AGALTQSDDWAALIADSKARNCYMDMDSL 209
+ +L Q + W LI D++ RN Y D D L
Sbjct: 1786 SQSLMQGEFWNGLIKDARRRNVYTDGDIL 1814
>gi|389646651|ref|XP_003720957.1| DNA-binding protein SMUBP-2 [Magnaporthe oryzae 70-15]
gi|351638349|gb|EHA46214.1| DNA-binding protein SMUBP-2 [Magnaporthe oryzae 70-15]
gi|440472216|gb|ELQ41092.1| DNA-binding protein SMUBP-2 [Magnaporthe oryzae Y34]
gi|440482178|gb|ELQ62693.1| DNA-binding protein SMUBP-2 [Magnaporthe oryzae P131]
Length = 2037
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 95/205 (46%), Positives = 126/205 (61%), Gaps = 6/205 (2%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDV--IHGRE 59
LL QYRMHP I +PS+ FY+G L D + L + ++ +P+L PY FFDV I R
Sbjct: 1642 LLDCQYRMHPEISLYPSKEFYEGLLADGSDMAKLRQQPWHDNPLLGPYRFFDVEGIQERG 1701
Query: 60 SHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVL 119
S RG S+ N +E + +Y Q S K +GIITPYK QL L+ +F+
Sbjct: 1702 S-RGQSLV--NTNEINVAIQIYTKFQADYASSIDMKGKIGIITPYKAQLFALRQKFQERW 1758
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRALWVM 178
+D+ NT DAFQG+E ++II SCVRAS G+GF+ DIRRMNV LTRAR +LW++
Sbjct: 1759 GEGVLEDIEFNTTDAFQGRECEIIIFSCVRASPTGGIGFMTDIRRMNVGLTRARSSLWIL 1818
Query: 179 GNAGALTQSDDWAALIADSKARNCY 203
G++ AL Q + W LI DSKAR+ Y
Sbjct: 1819 GDSRALRQGEFWNKLIEDSKARDRY 1843
>gi|86196492|gb|EAQ71130.1| hypothetical protein MGCH7_ch7g537 [Magnaporthe oryzae 70-15]
Length = 1986
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 95/205 (46%), Positives = 126/205 (61%), Gaps = 6/205 (2%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDV--IHGRE 59
LL QYRMHP I +PS+ FY+G L D + L + ++ +P+L PY FFDV I R
Sbjct: 1591 LLDCQYRMHPEISLYPSKEFYEGLLADGSDMAKLRQQPWHDNPLLGPYRFFDVEGIQERG 1650
Query: 60 SHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVL 119
S RG S+ N +E + +Y Q S K +GIITPYK QL L+ +F+
Sbjct: 1651 S-RGQSLV--NTNEINVAIQIYTKFQADYASSIDMKGKIGIITPYKAQLFALRQKFQERW 1707
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRALWVM 178
+D+ NT DAFQG+E ++II SCVRAS G+GF+ DIRRMNV LTRAR +LW++
Sbjct: 1708 GEGVLEDIEFNTTDAFQGRECEIIIFSCVRASPTGGIGFMTDIRRMNVGLTRARSSLWIL 1767
Query: 179 GNAGALTQSDDWAALIADSKARNCY 203
G++ AL Q + W LI DSKAR+ Y
Sbjct: 1768 GDSRALRQGEFWNKLIEDSKARDRY 1792
>gi|255726544|ref|XP_002548198.1| hypothetical protein CTRG_02495 [Candida tropicalis MYA-3404]
gi|240134122|gb|EER33677.1| hypothetical protein CTRG_02495 [Candida tropicalis MYA-3404]
Length = 2061
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 107/283 (37%), Positives = 149/283 (52%), Gaps = 28/283 (9%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
+L VQYRM+P I FPS FY +L D E ++ L ++KD L PY FFD I G+
Sbjct: 1637 MLDVQYRMNPMISKFPSAEFYDSKLKDGEGMLELNTRPWHKDDPLTPYRFFD-ISGKHQK 1695
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEF-----R 116
+ S N DEA+ + L E L + L G VGII+PYK Q+ ++ EF R
Sbjct: 1696 NALTQSLFNRDEARVALELTEKLMQYLPD-GEFSGKVGIISPYKEQVNTIKREFIAKFGR 1754
Query: 117 NVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRAL 175
+LN ++ NTVD FQGQE+++IIMSCVRAS G VGF++D RRMNVALTRA+ L
Sbjct: 1755 VILN-----EIDFNTVDGFQGQEKEIIIMSCVRASESGSVGFLSDFRRMNVALTRAKTTL 1809
Query: 176 WVMGNAGALTQSDDWAALIADSKARNCYMDMDSLPKEFSVALAAKAPGYGPLQGKIPHNA 235
W++GN +L + W L+AD+ R C ++ PG+ G
Sbjct: 1810 WILGNEDSLRRDAVWNRLLADATDRKC--------------VSKAYPGFLAQNGNKRKAI 1855
Query: 236 RGLRSAGQRHRSFDMNMESRSGTPSEDDEKVSRNGNYRPFKPP 278
+ G + + N + S T +E + + RN N +P P
Sbjct: 1856 SNTKDQGSKKTKPNPNTNT-SATTTERNVQEIRNNNSKPVPRP 1897
>gi|295662663|ref|XP_002791885.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226279537|gb|EEH35103.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 2130
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 92/208 (44%), Positives = 122/208 (58%), Gaps = 2/208 (0%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL QYRMHP I FPS FY GRL D + L +++K + PY FFDV G S
Sbjct: 1603 LLDTQYRMHPEISRFPSAAFYDGRLQDGPDMDKLRSRIWHKSELFGPYRFFDV-QGLHSS 1661
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
S N+ E + + LYE L K +GIITPYK QL+ ++++F N +
Sbjct: 1662 APKGHSLVNLAEVRVAMKLYERLTTDFKIYDFTN-KIGIITPYKGQLREMKNQFANKYGN 1720
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGNA 181
+ NT DAFQG+E ++II SCVRAS+ G+GF+ADIRRMNV LTRA+ +LWV+G++
Sbjct: 1721 SIFTMIEFNTTDAFQGRECEIIIFSCVRASDRGIGFLADIRRMNVGLTRAKSSLWVLGSS 1780
Query: 182 GALTQSDDWAALIADSKARNCYMDMDSL 209
+L Q + W LI D+ RN D L
Sbjct: 1781 KSLVQGEFWRGLINDAHTRNLVTQGDIL 1808
>gi|168044414|ref|XP_001774676.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673976|gb|EDQ60491.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 911
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 92/201 (45%), Positives = 121/201 (60%), Gaps = 3/201 (1%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
+L QYRMHP IR FPS+ FY+G L D + V + +++ PY FFD I G ES
Sbjct: 630 MLKTQYRMHPLIRAFPSKEFYEGALEDGDDVERVTSRPWHEHRCFGPYTFFD-IDGEESQ 688
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
GS S+ N DE +F + LY HL + G TV +I+PYKLQ+K L+ F VL
Sbjct: 689 PPGSGSWVNKDEVEFVLVLYRHLVALYPELK-GSPTVAVISPYKLQVKLLRQRFTEVLGK 747
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASN-HGVGFVADIRRMNVALTRARRALWVMGN 180
E + + INTVD FQG+E+D+ I SCVRA+ +GFV+D RRMNV LTRAR ++ V+G
Sbjct: 748 ETARLVDINTVDGFQGREKDIAIFSCVRATEGKSIGFVSDFRRMNVGLTRARASMLVVGC 807
Query: 181 AGALTQSDDWAALIADSKARN 201
A AL W L+ S R+
Sbjct: 808 AKALKIDKHWRNLVTSSIERH 828
>gi|392591642|gb|EIW80969.1| hypothetical protein CONPUDRAFT_104043 [Coniophora puteana RWD-64-598
SS2]
Length = 1855
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 161/302 (53%), Gaps = 15/302 (4%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LLS+QYRMHP I PSR FYQGRL D + +V++ +P+L Y FF+V G+ES
Sbjct: 1516 LLSIQYRMHPDISRLPSRIFYQGRLQDGPGMAEKTRQVWHDNPLLGTYRFFNVSKGQESE 1575
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
G S +NV E++ V L+ L+ K + VG+++ Y+ Q+ LQ F +
Sbjct: 1576 SNGR-SLKNVLESQVAVALFSRLRTEYKGIDFD-FRVGVVSMYRGQVLELQRAFEQRFGA 1633
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASN--HGVGFVADIRRMNVALTRARRALWVMG 179
+ + +TVD FQGQE+D+II+SCVRA VGF++D+RRMNV++TRA+ +L+++G
Sbjct: 1634 DIKGKVQFHTVDGFQGQEKDIIILSCVRAGPGLQSVGFLSDVRRMNVSITRAKSSLFILG 1693
Query: 180 NAGALTQSD-DWAALIADSKARNCYMDMDSLPKEFSVALAAKA---PGYGPLQGKIPHNA 235
NA L +SD +W +I D++ RN D+ P F+ A K P P + K
Sbjct: 1694 NAATLERSDSNWRQIIQDARTRNVLTDVG--PSYFTTPGATKPSQHPTPKPAKQKASAEN 1751
Query: 236 RGLRSAGQRHRSFDMNMESRSGTPSEDDEKVSRNGNYRPF---KPPLENSLDDFDQSGEK 292
+ + + S + + VS N N P KPPL N D+S ++
Sbjct: 1752 KPSAPPPLPNLLTPQQLAGSSVSTPLGLQPVSVNANASPMDEDKPPLSNP--PIDESKKR 1809
Query: 293 YR 294
R
Sbjct: 1810 PR 1811
>gi|406605000|emb|CCH43533.1| hypothetical protein BN7_3085 [Wickerhamomyces ciferrii]
Length = 2034
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 86/205 (41%), Positives = 126/205 (61%), Gaps = 3/205 (1%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
+LL VQYRMH I FPS+ FY G L D S+ L ++K+ PY F+D+ G+ES
Sbjct: 1577 LLLDVQYRMHSDISKFPSKKFYDGHLQDGPSMDVLTKREWHKNVSFPPYRFYDIAEGKES 1636
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
+ SY N E K + L + L + + +G+ITPYK Q + +Q F
Sbjct: 1637 QNSKTFSYVNKMEIKIAIELIDTLYTKFGRIDY-RNKIGVITPYKEQNRAIQQAFIRHFG 1695
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNH--GVGFVADIRRMNVALTRARRALWVM 178
++ D+ NT+D FQGQE+++IIMSCVRA ++ GVGF+ D RRMNVALTR++ +LW++
Sbjct: 1696 NQIRGDITFNTIDGFQGQEKEIIIMSCVRADSNKSGVGFLKDFRRMNVALTRSKCSLWIL 1755
Query: 179 GNAGALTQSDDWAALIADSKARNCY 203
G+ +L ++D W+ LI D+K RN +
Sbjct: 1756 GHNNSLVKNDLWSDLITDAKDRNMF 1780
>gi|121704136|ref|XP_001270332.1| tRNA-splicing endonuclease, putative [Aspergillus clavatus NRRL 1]
gi|119398476|gb|EAW08906.1| tRNA-splicing endonuclease, putative [Aspergillus clavatus NRRL 1]
Length = 2137
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 92/209 (44%), Positives = 125/209 (59%), Gaps = 4/209 (1%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL QYRMHP I +PS FY G+L D ++ L +++ +L PY FFDV G +
Sbjct: 1607 LLDTQYRMHPEISAYPSAAFYDGKLRDGPNMAQLRARPWHQSELLSPYRFFDV-QGLHQN 1665
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGL-GKVTVGIITPYKLQLKCLQHEFRNVLN 120
S N+ E + + LYE + + GK+ GIITPYK QL+ L+ +F
Sbjct: 1666 TTKGHSLINLAELRVAMQLYERITTDFRDYDFSGKI--GIITPYKGQLRELKTQFAARYG 1723
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGN 180
+ + NT DAFQG+E ++II SCVRASN G+GF++DIRRMNV LTRA+ +LWV+GN
Sbjct: 1724 NSIFNKVDFNTTDAFQGRESEIIIFSCVRASNKGIGFLSDIRRMNVGLTRAKSSLWVLGN 1783
Query: 181 AGALTQSDDWAALIADSKARNCYMDMDSL 209
+ +L Q + W LI DS+ RN Y D L
Sbjct: 1784 SQSLVQGEFWNGLIKDSRRRNVYTSGDIL 1812
>gi|358393396|gb|EHK42797.1| hypothetical protein TRIATDRAFT_86336 [Trichoderma atroviride IMI
206040]
Length = 2056
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 91/209 (43%), Positives = 127/209 (60%), Gaps = 3/209 (1%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL +QYRMHP I FPSR FY+ +L D + ++ L ++KD + PY FFDV +E
Sbjct: 1653 LLDMQYRMHPEISHFPSREFYESQLHDGQDMLQLRQAPWHKDTLFAPYRFFDVEGVQERG 1712
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
R G S N E + + LYE + + + L + +GIITPYK QL L+ F+
Sbjct: 1713 RKGQ-SLVNTRELEVALQLYERFSREYRDIDLTR-KIGIITPYKAQLYELRSRFQARYGE 1770
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVMGN 180
+ NT DAFQG+E ++II SCVRAS+ G +GF+ DIRRMNV LTRA+ +LW++G+
Sbjct: 1771 NITDIIEFNTTDAFQGRECEIIIFSCVRASSTGGIGFMTDIRRMNVGLTRAKSSLWILGD 1830
Query: 181 AGALTQSDDWAALIADSKARNCYMDMDSL 209
+ AL Q + W LI D++ R+ Y D L
Sbjct: 1831 SRALVQGEFWRKLIVDAQERDRYTKGDIL 1859
>gi|452003720|gb|EMD96177.1| hypothetical protein COCHEDRAFT_1201038 [Cochliobolus heterostrophus
C5]
Length = 1973
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 102/227 (44%), Positives = 132/227 (58%), Gaps = 7/227 (3%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL QYRMHP I FPS+ FY GRL D + L + +++ VL PY FFDV G+++
Sbjct: 1579 LLDTQYRMHPEISLFPSQTFYDGRLLDGGDMAGLRKQPWHQSMVLGPYRFFDV-KGQQAA 1637
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
S NV E K + LY+ L K VGIITPYK QL+ L+ F V
Sbjct: 1638 APKGHSLINVAEIKVAMQLYKRLTSDYPDYDF-KGKVGIITPYKSQLRELKQSFMQVYGQ 1696
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVMGN 180
+D+ NT DAFQG+E +VII SCVRAS G +GF+ DIRRMNV LTRA+ +LWV+GN
Sbjct: 1697 SIIEDIDFNTTDAFQGRESEVIIFSCVRASPAGGIGFLQDIRRMNVGLTRAKSSLWVLGN 1756
Query: 181 AGALTQSDDWAALIADSKARNCYMDMDSLPK---EFSVALAAKAPGY 224
+ +L + W LI ++K RN + D D +PK + S A GY
Sbjct: 1757 SESLQRGQYWNKLIVNAKERNRFTDGD-VPKMLNQHSSKFPAPKEGY 1802
>gi|340519570|gb|EGR49808.1| hypothetical protein TRIREDRAFT_59544 [Trichoderma reesei QM6a]
Length = 2034
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 92/213 (43%), Positives = 129/213 (60%), Gaps = 11/213 (5%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL +QYRMHP I FPSR FY+ +L D + ++ L ++KD + PY FFDV +E
Sbjct: 1652 LLDMQYRMHPEISSFPSREFYESQLKDGQDMLRLRQAPWHKDALFAPYRFFDVEGVQERG 1711
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
R G S N E + +YE + + L + +GIITPYK QL HE R+ +
Sbjct: 1712 RKGQ-SLVNTKELDVALQMYERFSRDYRDCDLTR-KIGIITPYKAQL----HELRSRFQA 1765
Query: 122 EEGKDLY----INTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALW 176
G+++ NT DAFQG+E ++II SCVRAS+ G +GF+ DIRRMNV LTRA+ +LW
Sbjct: 1766 RYGENITNIIEFNTTDAFQGRECEIIIFSCVRASSTGGIGFMTDIRRMNVGLTRAKSSLW 1825
Query: 177 VMGNAGALTQSDDWAALIADSKARNCYMDMDSL 209
++G++ AL Q + W LI D++ R+ Y D L
Sbjct: 1826 ILGDSRALVQGEFWRKLIEDAQGRDRYTKGDIL 1858
>gi|241953325|ref|XP_002419384.1| helicase, putative; tRNA-splicing endonuclease positive effector,
putative [Candida dubliniensis CD36]
gi|223642724|emb|CAX42978.1| helicase, putative [Candida dubliniensis CD36]
Length = 2009
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 86/202 (42%), Positives = 125/202 (61%), Gaps = 3/202 (1%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
+L VQYRMHP I FPS FY +L D ++++ L ++KDP L PY FFD++ G+
Sbjct: 1604 MLDVQYRMHPMISKFPSSEFYNSKLKDGDNMLELNTRPWHKDPPLTPYRFFDIL-GKHEK 1662
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
+ S N DEA + L + L + + VGII+PYK Q++ ++ F
Sbjct: 1663 NELTRSLFNTDEAMVALQLTDKLMQIIPQDKFSG-NVGIISPYKEQIRKIKEVFVRKYGK 1721
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVMGN 180
++ NTVD FQGQE+++IIMSCVRAS G VGF++D+RRMNVALTRA+ LW++GN
Sbjct: 1722 PILDEIDFNTVDGFQGQEKEIIIMSCVRASATGNVGFLSDVRRMNVALTRAKTTLWILGN 1781
Query: 181 AGALTQSDDWAALIADSKARNC 202
+L++++ W L+ D+ R C
Sbjct: 1782 KESLSRNEVWRKLLTDADERKC 1803
>gi|366999100|ref|XP_003684286.1| hypothetical protein TPHA_0B01790 [Tetrapisispora phaffii CBS 4417]
gi|357522582|emb|CCE61852.1| hypothetical protein TPHA_0B01790 [Tetrapisispora phaffii CBS 4417]
Length = 2074
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 90/204 (44%), Positives = 126/204 (61%), Gaps = 4/204 (1%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL+VQYRMHP I FPS FY G+L D + N+ ++ L PY FFD+I GR
Sbjct: 1656 LLNVQYRMHPSISAFPSLEFYDGKLKDGPDMANITKRPWHSIDSLGPYKFFDIISGRHEQ 1715
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
++SY N +EA+ V L + L K ++ +G+I+PYK Q+ L+ EFRN
Sbjct: 1716 NSRTMSYNNPEEARVAVELVDFLLKRFENKYDFTGKIGVISPYKEQVFKLRREFRNHFGL 1775
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRA--SNH--GVGFVADIRRMNVALTRARRALWV 177
K + NT+D FQGQE+++II+SCVRA S+H GVGF+ D RRMNVA TRA+ +LW+
Sbjct: 1776 LIEKYVDFNTIDGFQGQEKEIIILSCVRANDSDHASGVGFLKDFRRMNVAFTRAKSSLWI 1835
Query: 178 MGNAGALTQSDDWAALIADSKARN 201
+G+ +L + W LI ++K RN
Sbjct: 1836 LGHHRSLKRDKLWNHLITNAKQRN 1859
>gi|83772589|dbj|BAE62717.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 1850
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 93/209 (44%), Positives = 126/209 (60%), Gaps = 4/209 (1%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL +QYRMHP I +P FY G+L D + L +++ +L PY FFDV +S
Sbjct: 1482 LLDIQYRMHPEISAYPRNAFYDGKLQDGPDMARLRARPWHQSELLSPYRFFDVQGLHQSA 1541
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGL-GKVTVGIITPYKLQLKCLQHEFRNVLN 120
G S N+ E + + LYE L + GK+ GIITPYK QL+ L+ F
Sbjct: 1542 AKGH-SLVNMAELRVAMQLYERLVSDFQGFDFSGKI--GIITPYKGQLRELKTHFAAKYG 1598
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGN 180
+ + NT DAFQG+E +VII SCVRASN G+GF++DIRRMNV LTRA+ +LWV+GN
Sbjct: 1599 NAIFNMIDFNTTDAFQGRESEVIIFSCVRASNKGIGFLSDIRRMNVGLTRAKSSLWVLGN 1658
Query: 181 AGALTQSDDWAALIADSKARNCYMDMDSL 209
+ +L Q + W +LI D++ R+ Y D D L
Sbjct: 1659 SQSLVQGEFWNSLIKDARRRSVYTDGDVL 1687
>gi|308198102|ref|XP_001386840.2| DEAD-box type RNA helicase [Scheffersomyces stipitis CBS 6054]
gi|149388861|gb|EAZ62817.2| DEAD-box type RNA helicase [Scheffersomyces stipitis CBS 6054]
Length = 1999
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 117/323 (36%), Positives = 161/323 (49%), Gaps = 19/323 (5%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL VQYRMHP I FPS FYQ RL D E + + ++ L PY FFD++ R
Sbjct: 1593 LLDVQYRMHPQISAFPSAQFYQSRLKDGEGMAAKNERPWHSQYPLSPYRFFDIV-SRHQR 1651
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
S S N EA+ + L E L L +GII+PYK Q+K L+ F
Sbjct: 1652 NELSRSLFNTGEARVALELVEKLMTLLPEDQFSG-RIGIISPYKEQIKTLRDVFIKKYGY 1710
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVMGN 180
+ NTVD FQGQE+++IIMSCVRAS++G VGF++D+RRMNVALTRAR LW++GN
Sbjct: 1711 SITTQIDFNTVDGFQGQEKEIIIMSCVRASDNGNVGFLSDVRRMNVALTRARTTLWILGN 1770
Query: 181 AGALTQSDDWAALIADSKARNCYMDMDSLPKEFSVALAAKAPGYGPL----QGKIPHNAR 236
+L ++ W L+ D+ RNC + P S A + +APG + QG ++
Sbjct: 1771 KESLMRNKIWNKLLTDATDRNCV--SQAYPGFLSSA-SEQAPGKRKVVENRQGNATKRSK 1827
Query: 237 GLRSAGQRHRSFDMNMESRSGTPSEDDEKVSRN--GNYRPFKPPLENSLDDFDQSGEK-- 292
+++ G + D S P +K+ + G+ P + NS + Q G K
Sbjct: 1828 HIKNEGTVKPAQD-KRNSAKANPHSGPKKIKSSIFGSSNPTTSGIPNSEPELIQLGNKPK 1886
Query: 293 ----YRDAWQHGIQKKQSSGGKG 311
Y GI K S K
Sbjct: 1887 KPVIYNAGGTKGINGKAISASKS 1909
>gi|391873505|gb|EIT82535.1| tRNA-splicing endonuclease positive effector [Aspergillus oryzae
3.042]
Length = 2123
Score = 171 bits (432), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 93/209 (44%), Positives = 126/209 (60%), Gaps = 4/209 (1%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL +QYRMHP I +P FY G+L D + L +++ +L PY FFDV +S
Sbjct: 1605 LLDIQYRMHPEISAYPRNAFYDGKLQDGPDMARLRARPWHQSELLSPYRFFDVQGLHQSA 1664
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGL-GKVTVGIITPYKLQLKCLQHEFRNVLN 120
G S N+ E + + LYE L + GK+ GIITPYK QL+ L+ F
Sbjct: 1665 AKGH-SLVNMAELRVAMQLYERLVSDFQGFDFSGKI--GIITPYKGQLRELKTHFAAKYG 1721
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGN 180
+ + NT DAFQG+E +VII SCVRASN G+GF++DIRRMNV LTRA+ +LWV+GN
Sbjct: 1722 NAIFNMIDFNTTDAFQGRESEVIIFSCVRASNKGIGFLSDIRRMNVGLTRAKSSLWVLGN 1781
Query: 181 AGALTQSDDWAALIADSKARNCYMDMDSL 209
+ +L Q + W +LI D++ R+ Y D D L
Sbjct: 1782 SQSLVQGEFWNSLIKDARRRSVYTDGDVL 1810
>gi|317150187|ref|XP_001823850.2| tRNA-splicing endonuclease [Aspergillus oryzae RIB40]
Length = 2103
Score = 171 bits (432), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 93/209 (44%), Positives = 126/209 (60%), Gaps = 4/209 (1%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL +QYRMHP I +P FY G+L D + L +++ +L PY FFDV +S
Sbjct: 1605 LLDIQYRMHPEISAYPRNAFYDGKLQDGPDMARLRARPWHQSELLSPYRFFDVQGLHQSA 1664
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGL-GKVTVGIITPYKLQLKCLQHEFRNVLN 120
G S N+ E + + LYE L + GK+ GIITPYK QL+ L+ F
Sbjct: 1665 AKGH-SLVNMAELRVAMQLYERLVSDFQGFDFSGKI--GIITPYKGQLRELKTHFAAKYG 1721
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGN 180
+ + NT DAFQG+E +VII SCVRASN G+GF++DIRRMNV LTRA+ +LWV+GN
Sbjct: 1722 NAIFNMIDFNTTDAFQGRESEVIIFSCVRASNKGIGFLSDIRRMNVGLTRAKSSLWVLGN 1781
Query: 181 AGALTQSDDWAALIADSKARNCYMDMDSL 209
+ +L Q + W +LI D++ R+ Y D D L
Sbjct: 1782 SQSLVQGEFWNSLIKDARRRSVYTDGDVL 1810
>gi|238499341|ref|XP_002380905.1| tRNA-splicing endonuclease, putative [Aspergillus flavus NRRL3357]
gi|220692658|gb|EED49004.1| tRNA-splicing endonuclease, putative [Aspergillus flavus NRRL3357]
Length = 2122
Score = 171 bits (432), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 93/209 (44%), Positives = 126/209 (60%), Gaps = 4/209 (1%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL +QYRMHP I +P FY G+L D + L +++ +L PY FFDV +S
Sbjct: 1543 LLDIQYRMHPEISAYPRNAFYDGKLQDGPDMARLRARPWHQSELLSPYRFFDVQGLHQSA 1602
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGL-GKVTVGIITPYKLQLKCLQHEFRNVLN 120
G S N+ E + + LYE L + GK+ GIITPYK QL+ L+ F
Sbjct: 1603 AKGH-SLVNMAELRVAMQLYERLVSDFQGFDFSGKI--GIITPYKGQLRELKTHFAAKYG 1659
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGN 180
+ + NT DAFQG+E +VII SCVRASN G+GF++DIRRMNV LTRA+ +LWV+GN
Sbjct: 1660 NAIFNMIDFNTTDAFQGRESEVIIFSCVRASNKGIGFLSDIRRMNVGLTRAKSSLWVLGN 1719
Query: 181 AGALTQSDDWAALIADSKARNCYMDMDSL 209
+ +L Q + W +LI D++ R+ Y D D L
Sbjct: 1720 SQSLVQGEFWNSLIKDARRRSVYTDGDVL 1748
>gi|156842218|ref|XP_001644478.1| hypothetical protein Kpol_520p43 [Vanderwaltozyma polyspora DSM
70294]
gi|156115121|gb|EDO16620.1| hypothetical protein Kpol_520p43 [Vanderwaltozyma polyspora DSM
70294]
Length = 2267
Score = 170 bits (431), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 86/202 (42%), Positives = 128/202 (63%), Gaps = 2/202 (0%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL VQYRM+P I FPS FY GRL D ++ + ++ L Y FFD++ GR+
Sbjct: 1642 LLDVQYRMNPAISVFPSLEFYCGRLKDGPNMEAITKRPWHDVAPLSTYRFFDIVSGRQEQ 1701
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
++SY N++E + + L ++L K ++ +GII+PYK Q+ ++ EFRN S
Sbjct: 1702 NIKTMSYVNMEEIRVAIELIDYLLKKFENKYDFSGKIGIISPYKEQVIKMRREFRNFFGS 1761
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASNHG--VGFVADIRRMNVALTRARRALWVMG 179
K + NT+D FQGQE+++II+SCVRAS+ G VGF+ D RRMNVALTRA+ ++W++G
Sbjct: 1762 PISKYVDFNTIDGFQGQEKEIIIISCVRASDSGTSVGFLKDFRRMNVALTRAKSSMWILG 1821
Query: 180 NAGALTQSDDWAALIADSKARN 201
+ +L + W LI+D+K RN
Sbjct: 1822 HHKSLQNNKLWNHLISDAKERN 1843
>gi|340975658|gb|EGS22773.1| 5'-3' RNA helicase-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1993
Score = 170 bits (431), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 98/237 (41%), Positives = 139/237 (58%), Gaps = 20/237 (8%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL +QYRMHP I FPS+ FY+G L D + L + +++ +L PY FFDV G +
Sbjct: 1634 LLDMQYRMHPEISRFPSKEFYEGLLQDGADMARLRLQPWHQSVLLGPYRFFDV-KGSQER 1692
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGL-GKVTVGIITPYKLQLKCLQHEFRNVLN 120
+ S N +E K + LY + + + L GK+ GIITPYK QL+ L+ +F
Sbjct: 1693 GPKNQSLVNEEEVKVAMQLYMRFRSDYRDIDLTGKI--GIITPYKAQLQRLRQKFVERYG 1750
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRALWVMG 179
+ + NT DAFQG+E ++II SCVRAS G+GF+ DIRRMNV LTRAR +LW++G
Sbjct: 1751 ESITEQIEFNTTDAFQGRECEIIIFSCVRASPTGGIGFMTDIRRMNVGLTRARSSLWILG 1810
Query: 180 NAGALTQSDDWAALIADSKARNCYMD---------------MDSLPKEFSVALAAKA 221
++ AL Q + WA LI D+K R+ Y + ++SL K++SV +A A
Sbjct: 1811 DSRALVQGEFWAKLIEDAKQRDRYTNGNIMALLSQPGPRVSLESLAKQYSVPVAPVA 1867
>gi|384484388|gb|EIE76568.1| hypothetical protein RO3G_01272 [Rhizopus delemar RA 99-880]
Length = 1809
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 104/277 (37%), Positives = 152/277 (54%), Gaps = 27/277 (9%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LLS+QYRMHP I FPS+ FYQ RL D + + +++ P PY F+DV G+E
Sbjct: 1437 LLSIQYRMHPEISTFPSKLFYQSRLQDGPGMDKISSAIWHALPEFPPYCFYDVRDGQEKM 1496
Query: 62 -RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
RG S+ NV EA VCL + L L ++ +G+ITPYK Q+ L+ F+
Sbjct: 1497 GRGKSIF--NVAEADAAVCLVDLLLTKLPTIKFAS-KIGVITPYKQQVGQLKARFQKRFG 1553
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRA-SNHGVGFVADIRRMNVALTRARRALWVMG 179
+ + NTVD FQGQE++++I SCVRA S G+GF+AD+RRMNV LTRA+ +L+V+G
Sbjct: 1554 NGIVDAIDFNTVDGFQGQEKEIVIFSCVRAGSGRGIGFLADMRRMNVGLTRAKCSLFVLG 1613
Query: 180 NAGALTQSDDWAALIADSKARNCY-----------MDMDSLPKEFSVALAAKAP------ 222
+A +L++S+ W L+ D++ R+ M+ +P+ AA P
Sbjct: 1614 HARSLSRSEYWGDLVRDAEKRSLVRECGYPYFQHRMNGSKVPQNIYEKDAAALPSTQSIT 1673
Query: 223 -GYGPLQGKIPHNARGLRSAGQRHRSFDMNMESRSGT 258
GP++ PH+ R G + S M SRS +
Sbjct: 1674 YAKGPIKIHEPHSPR----LGDKRSSSPMPENSRSAS 1706
>gi|50293955|ref|XP_449389.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528703|emb|CAG62365.1| unnamed protein product [Candida glabrata]
Length = 1979
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 82/204 (40%), Positives = 125/204 (61%), Gaps = 2/204 (0%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
LL VQYRMHP I FPS FY GRL D + +L ++++ +PY FFD+ G++
Sbjct: 1608 FLLDVQYRMHPAISKFPSAEFYDGRLMDGPDMESLNKRIWHEQEPFKPYKFFDITSGQQV 1667
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
++SY N +E + + + + L + + +G+I+PYK Q++ ++ EF
Sbjct: 1668 QNVKTMSYTNKEEIEVAIEMVDKLFRLYDNKIDFSNKIGVISPYKEQIQRMRREFMRYFG 1727
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRA--SNHGVGFVADIRRMNVALTRARRALWVM 178
K + NT+D FQGQE+++II+SCVRA S GVGF+ D RRMNVALTRAR ++W++
Sbjct: 1728 GSITKFVDFNTIDGFQGQEKEIIIISCVRADDSQSGVGFLKDFRRMNVALTRARTSIWIL 1787
Query: 179 GNAGALTQSDDWAALIADSKARNC 202
G+ +L +S W+ LI D++ R C
Sbjct: 1788 GHQKSLRKSKLWSHLIDDAEGRGC 1811
>gi|440800551|gb|ELR21587.1| DNAbinding protein SMUBP-2, putative [Acanthamoeba castellanii str.
Neff]
Length = 799
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 89/206 (43%), Positives = 124/206 (60%), Gaps = 10/206 (4%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN----LPDEVYYKDPVLRPYVFFDVIH 56
++L VQYRMHP IR+FPS+HFY RLTD ++ L ++ Y+ DP +P++F+D+
Sbjct: 591 IMLDVQYRMHPLIREFPSKHFYDNRLTDGPNIDTSQSGLYNQPYHADPSFQPFLFYDLCK 650
Query: 57 GRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFR 116
G E SY N EA F + L++ L + G+ITPYK Q LQ F
Sbjct: 651 GVEEQGARGQSYVNPAEATFCLQLFQDL-----CSRFPHIESGVITPYKQQYFLLQRTFA 705
Query: 117 NVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRA-SNHGVGFVADIRRMNVALTRARRAL 175
L+ + INT+D FQG+E+DVII SCVRA G+GF++DIRRMNVALTRA+ L
Sbjct: 706 AALDKATYSAIDINTIDGFQGREKDVIIFSCVRAHETKGIGFLSDIRRMNVALTRAKFGL 765
Query: 176 WVMGNAGALTQSDDWAALIADSKARN 201
+V+G + AL + W AL+ +K +
Sbjct: 766 FVVGKSTALLNNPHWGALVNHAKEKQ 791
>gi|326474384|gb|EGD98393.1| tRNA-splicing endonuclease [Trichophyton tonsurans CBS 112818]
Length = 2188
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 94/209 (44%), Positives = 125/209 (59%), Gaps = 4/209 (1%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL QYRMHP I FPS+ FY G+L D + L + ++ +L PY FFDV G S
Sbjct: 1626 LLDTQYRMHPEISKFPSQAFYDGKLQDGPGMAPLRKKPWHGSELLGPYRFFDV-QGMHSS 1684
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGL-GKVTVGIITPYKLQLKCLQHEFRNVLN 120
S N+ E + LYE L ++ GK+ GIITPYK QL+ L+ F
Sbjct: 1685 AAKGHSLINIAELTVAMRLYERLLADYRNYDFAGKI--GIITPYKGQLRELKSRFAAKYG 1742
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGN 180
S + NT DAFQG+E +VII SCVRAS+ G+GF++DIRRMNV LTRA+ +LWV+GN
Sbjct: 1743 SSIFTTVEFNTTDAFQGRECEVIIFSCVRASDRGIGFLSDIRRMNVGLTRAKSSLWVLGN 1802
Query: 181 AGALTQSDDWAALIADSKARNCYMDMDSL 209
+ +L + + W ALI D++ R Y + D L
Sbjct: 1803 SQSLVRGEFWRALIHDARERQLYTEGDIL 1831
>gi|302499595|ref|XP_003011793.1| hypothetical protein ARB_02022 [Arthroderma benhamiae CBS 112371]
gi|291175346|gb|EFE31153.1| hypothetical protein ARB_02022 [Arthroderma benhamiae CBS 112371]
Length = 2117
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/209 (44%), Positives = 125/209 (59%), Gaps = 4/209 (1%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL QYRMHP I FPS+ FY G+L D + L + ++ +L PY FFDV G S
Sbjct: 1619 LLDTQYRMHPEISKFPSQAFYDGKLQDGPGMAPLRKKPWHGSELLGPYRFFDV-QGMHSS 1677
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGL-GKVTVGIITPYKLQLKCLQHEFRNVLN 120
S N+ E + LYE L ++ GK+ GIITPYK QL+ L+ F
Sbjct: 1678 AAKGHSLVNIAELTVAMRLYERLLADYRNYDFAGKI--GIITPYKGQLRELKSRFAAKYG 1735
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGN 180
S + NT DAFQG+E +VII SCVRAS+ G+GF++DIRRMNV LTRA+ +LWV+GN
Sbjct: 1736 SSIFTAVEFNTTDAFQGRECEVIIFSCVRASDRGIGFLSDIRRMNVGLTRAKSSLWVLGN 1795
Query: 181 AGALTQSDDWAALIADSKARNCYMDMDSL 209
+ +L + + W ALI D++ R Y + D L
Sbjct: 1796 SQSLVRGEFWRALIYDARERQLYTEGDIL 1824
>gi|315055809|ref|XP_003177279.1| helicase SEN1 [Arthroderma gypseum CBS 118893]
gi|311339125|gb|EFQ98327.1| helicase SEN1 [Arthroderma gypseum CBS 118893]
Length = 2179
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/209 (44%), Positives = 125/209 (59%), Gaps = 4/209 (1%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL QYRMHP I FPS+ FY G+L D + L + ++ +L PY FFDV G S
Sbjct: 1616 LLDTQYRMHPEISKFPSQAFYDGKLQDGPGMAPLRKKPWHGSELLGPYRFFDV-QGMHSS 1674
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGL-GKVTVGIITPYKLQLKCLQHEFRNVLN 120
S N+ E + LYE L ++ GK+ GIITPYK QL+ L+ F
Sbjct: 1675 AAKGHSLVNIAELTVAMRLYERLLADYRNYDFAGKI--GIITPYKGQLRELKSRFAAKYG 1732
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGN 180
S + NT DAFQG+E +VII SCVRAS+ G+GF++DIRRMNV LTRA+ +LWV+GN
Sbjct: 1733 SSIFTAVEFNTTDAFQGRECEVIIFSCVRASDRGIGFLSDIRRMNVGLTRAKSSLWVLGN 1792
Query: 181 AGALTQSDDWAALIADSKARNCYMDMDSL 209
+ +L + + W ALI D++ R Y + D L
Sbjct: 1793 SQSLVRGEFWRALIHDARDRQLYTEGDIL 1821
>gi|302656653|ref|XP_003020078.1| hypothetical protein TRV_05851 [Trichophyton verrucosum HKI 0517]
gi|291183859|gb|EFE39454.1| hypothetical protein TRV_05851 [Trichophyton verrucosum HKI 0517]
Length = 2139
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/209 (44%), Positives = 125/209 (59%), Gaps = 4/209 (1%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL QYRMHP I FPS+ FY G+L D + L + ++ +L PY FFDV G S
Sbjct: 1618 LLDTQYRMHPEISKFPSQAFYDGKLQDGPGMAPLRKKPWHGSELLGPYRFFDV-QGMHSS 1676
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGL-GKVTVGIITPYKLQLKCLQHEFRNVLN 120
S N+ E + LYE L ++ GK+ GIITPYK QL+ L+ F
Sbjct: 1677 AAKGHSLVNIAELTVAMRLYERLVADYRNYDFAGKI--GIITPYKGQLRELKSRFAAKYG 1734
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGN 180
S + NT DAFQG+E +VII SCVRAS+ G+GF++DIRRMNV LTRA+ +LWV+GN
Sbjct: 1735 SSIFTAVEFNTTDAFQGRECEVIIFSCVRASDRGIGFLSDIRRMNVGLTRAKSSLWVLGN 1794
Query: 181 AGALTQSDDWAALIADSKARNCYMDMDSL 209
+ +L + + W ALI D++ R Y + D L
Sbjct: 1795 SQSLVRGEFWRALIHDARERQLYTEGDIL 1823
>gi|403214571|emb|CCK69072.1| hypothetical protein KNAG_0B06440 [Kazachstania naganishii CBS 8797]
Length = 2187
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 82/202 (40%), Positives = 123/202 (60%), Gaps = 2/202 (0%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL+VQYRMHP I FPS+ FY G+LTD + + ++ P L PY FFD+ GR+
Sbjct: 1612 LLNVQYRMHPDISSFPSKEFYDGKLTDGPGMEEINKRPWHSCPPLSPYKFFDIAMGRQEQ 1671
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
S+S+ N +E + + L +HL K + +GII+PY+ Q+ ++ EF
Sbjct: 1672 NLKSMSFTNAEEVRAALKLIDHLFKKFDNTVNFTGKIGIISPYREQMLRMRREFTRQFGG 1731
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRA--SNHGVGFVADIRRMNVALTRARRALWVMG 179
K + NT+D FQGQE+++II+SCVRA + VGF+ D RRMNVA TRA+ ++W++G
Sbjct: 1732 SITKYIDFNTIDGFQGQEKEIIIISCVRADDTKSSVGFLKDFRRMNVAFTRAKTSMWILG 1791
Query: 180 NAGALTQSDDWAALIADSKARN 201
+ +L ++ W LI D++ RN
Sbjct: 1792 HQRSLVKNKLWRNLIEDARNRN 1813
>gi|449298811|gb|EMC94826.1| hypothetical protein BAUCODRAFT_93353, partial [Baudoinia
compniacensis UAMH 10762]
Length = 1803
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 91/207 (43%), Positives = 121/207 (58%), Gaps = 3/207 (1%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL QYRMHP I FPSR FY G L D + +L ++ VL PY FFDV HG+
Sbjct: 1593 LLDTQYRMHPDISVFPSRTFYDGLLKDGTGMASLRQRPWHASAVLAPYRFFDV-HGQHQS 1651
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
S N+ E + + LYE L K +GIITPYK QL+ L+ F +
Sbjct: 1652 APKGHSLVNIAEVEIAMALYERLISDFKGYEYNG-RIGIITPYKSQLRMLRDRFSQRFGN 1710
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVMGN 180
+ NT DAFQG+E ++II SCVRAS G +GF+ DIRRMNV LTRA+ +LWV+GN
Sbjct: 1711 TISDVVEFNTTDAFQGRESEIIIFSCVRASPAGGIGFLQDIRRMNVGLTRAKSSLWVLGN 1770
Query: 181 AGALTQSDDWAALIADSKARNCYMDMD 207
+ +L++ W L+ D++AR+ Y+ D
Sbjct: 1771 SDSLSRGQYWRKLVEDARARDAYITGD 1797
>gi|451855806|gb|EMD69097.1| hypothetical protein COCSADRAFT_206223 [Cochliobolus sativus ND90Pr]
Length = 1974
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/227 (44%), Positives = 131/227 (57%), Gaps = 7/227 (3%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL QYRMHP I FPS+ FY RL D + L + +++ VL PY FFDV G+++
Sbjct: 1580 LLDTQYRMHPEISLFPSQTFYDSRLLDGGDMAGLRKQPWHQSMVLGPYRFFDV-KGQQAA 1638
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
S NV E K + LY+ L K VGIITPYK QL+ L+ F V
Sbjct: 1639 APKGHSLINVAEIKVAMQLYKRLTSDYPDYDF-KGKVGIITPYKSQLRELKQSFMQVYGQ 1697
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVMGN 180
+D+ NT DAFQG+E +VII SCVRAS G +GF+ DIRRMNV LTRA+ +LWV+GN
Sbjct: 1698 SIIEDIDFNTTDAFQGRESEVIIFSCVRASPAGGIGFLQDIRRMNVGLTRAKSSLWVLGN 1757
Query: 181 AGALTQSDDWAALIADSKARNCYMDMDSLPK---EFSVALAAKAPGY 224
+ +L + W LI ++K RN + D D +PK + S A GY
Sbjct: 1758 SESLQRGQYWNKLIVNAKERNRFTDGD-VPKMLNQHSSKFPAPKEGY 1803
>gi|225461912|ref|XP_002265434.1| PREDICTED: probable helicase DDB_G0274399-like [Vitis vinifera]
Length = 831
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 85/206 (41%), Positives = 123/206 (59%), Gaps = 2/206 (0%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
+L QYRMHP IR FPS+ FY L D V + +++ P+ FFD+ G+ES
Sbjct: 554 MLKTQYRMHPEIRSFPSKEFYDEALEDGPDVKDQTVRLWHDYRCFGPFCFFDIHEGKESQ 613
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
GS S+ NVDE +F + +Y L + + II+PY+ Q+K + F++
Sbjct: 614 PSGSGSWVNVDEVEFVLLMYHKLVTRYPELK-SSSRLAIISPYRHQVKLFRERFQDTFGV 672
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRALWVMGN 180
E K + INTVD FQG+E+DV I SCVRAS + G+GFVAD RRMNV +TRAR ++ V+G+
Sbjct: 673 ESDKVVDINTVDGFQGREKDVAIFSCVRASKDKGIGFVADFRRMNVGITRARASVLVVGS 732
Query: 181 AGALTQSDDWAALIADSKARNCYMDM 206
A L + + W L+ ++ RNC + +
Sbjct: 733 ASTLKKDEHWNNLLESAEKRNCLLKV 758
>gi|390603202|gb|EIN12594.1| hypothetical protein PUNSTDRAFT_118369 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 1879
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 96/247 (38%), Positives = 141/247 (57%), Gaps = 13/247 (5%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LLS+QYRMHP I PS+ FY GRL D + + +++ PY FF+V G+E
Sbjct: 1540 LLSIQYRMHPEISRLPSQIFYDGRLQDGPDMAEKTKQPWHRHAKFGPYRFFNVNRGQEEP 1599
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
G + S N E + V LY L++ S+ L VG+++ Y+ Q+ ++ F +
Sbjct: 1600 -GRAKSLMNKAECQVAVALYTRLRREFSSIDLD-FRVGVVSMYRAQIFEMRRAFEQRFGA 1657
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASN--HGVGFVADIRRMNVALTRARRALWVMG 179
E + NTVD FQGQE+DVII+SCVRA H VGF++D RRMNVALTRAR +L+V+G
Sbjct: 1658 EIVGKVDFNTVDGFQGQEKDVIILSCVRAGANLHSVGFLSDTRRMNVALTRARSSLFVLG 1717
Query: 180 NAGALTQSDD-WAALIADSKARNCYMDMDSLPKEFSVALAAKAPGYGPLQGKIPHNARGL 238
++ L D W+ ++ D+++R+C++D+D F+ PG+ L IP +
Sbjct: 1718 HSPTLENGDKTWSKIVNDARSRSCHIDVDV--NYFTT------PGHSTLPSPIPSVKNPV 1769
Query: 239 RSAGQRH 245
RS QR
Sbjct: 1770 RSVAQRQ 1776
>gi|254579116|ref|XP_002495544.1| ZYRO0B13860p [Zygosaccharomyces rouxii]
gi|238938434|emb|CAR26611.1| ZYRO0B13860p [Zygosaccharomyces rouxii]
Length = 2130
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 83/203 (40%), Positives = 122/203 (60%), Gaps = 3/203 (1%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL VQYRMH I FPS FY+ RL D V L +++ RPY FFD++ GRE
Sbjct: 1616 LLDVQYRMHSSISKFPSMEFYKSRLKDGPEVDTLNQRPWHELKYSRPYKFFDILTGREQQ 1675
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
++SY N+DE K + L E+L + +G+I+PYK Q ++ EF +
Sbjct: 1676 SAKTMSYVNLDEIKVAMELVEYLFHKFDKIDFTS-KIGVISPYKEQASRMRREFLSRFGG 1734
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRA--SNHGVGFVADIRRMNVALTRARRALWVMG 179
+++ NT+D FQGQE+++II+SCVRA + VGF+ D RRMNVALTRA+ ++W++G
Sbjct: 1735 TITREVDFNTIDGFQGQEKEIIIISCVRADDTKSSVGFLRDFRRMNVALTRAKTSMWILG 1794
Query: 180 NAGALTQSDDWAALIADSKARNC 202
+ +L ++ W LI D++ R C
Sbjct: 1795 HQKSLVKNKLWNRLITDAQQRGC 1817
>gi|380485224|emb|CCF39497.1| helicase SEN1 [Colletotrichum higginsianum]
Length = 696
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 106/287 (36%), Positives = 154/287 (53%), Gaps = 14/287 (4%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL QYRMHP I FPS FY+G+L D E + L + ++ +L PY FFDV G +S
Sbjct: 255 LLDRQYRMHPEISLFPSTEFYEGKLVDGEDMSALRRQPWHASALLGPYRFFDV-EGTQSK 313
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
S N E + + LYE + + +GIITPYK QL+ L+ +F
Sbjct: 314 GSKGRSLVNHAELRVAMQLYERFKADFGRNYDIRGKIGIITPYKAQLQELKWQFSRQFGE 373
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRA-SNHGVGFVADIRRMNVALTRARRALWVMGN 180
D+ NT DAFQG+E ++II SCVRA G+GFV DIRRMNV LTRA+ +LW++G+
Sbjct: 374 AITDDIEFNTTDAFQGRECEIIIFSCVRADPTGGIGFVKDIRRMNVGLTRAKSSLWILGD 433
Query: 181 AGALTQSDDWAALIADSKARNCYM--DMDSLPKEFSVALAAKAPGYGPLQGKIPHNARGL 238
+ AL Q + W LI ++K R+ Y D+ S+ ++ SV + PL ++ +A +
Sbjct: 434 SRALVQGEFWNKLITNAKQRSLYTKGDVISMLRKPSVMRPS-----SPLSRQVLQDASDV 488
Query: 239 RSAGQRHRSFDMNMESRSGTPSEDDEKVSRNGNYRPFKPPLENSLDD 285
GQ+H + + S T ++ SR P +PP ++ D
Sbjct: 489 EMVGQQHGVNMIETKDVSYTAAQ-----SRKVTQPPQQPPTNYTVTD 530
>gi|296089913|emb|CBI39732.3| unnamed protein product [Vitis vinifera]
Length = 332
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 85/206 (41%), Positives = 123/206 (59%), Gaps = 2/206 (0%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
+L QYRMHP IR FPS+ FY L D V + +++ P+ FFD+ G+ES
Sbjct: 55 MLKTQYRMHPEIRSFPSKEFYDEALEDGPDVKDQTVRLWHDYRCFGPFCFFDIHEGKESQ 114
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
GS S+ NVDE +F + +Y L + + II+PY+ Q+K + F++
Sbjct: 115 PSGSGSWVNVDEVEFVLLMYHKLVTRYPELK-SSSRLAIISPYRHQVKLFRERFQDTFGV 173
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRALWVMGN 180
E K + INTVD FQG+E+DV I SCVRAS + G+GFVAD RRMNV +TRAR ++ V+G+
Sbjct: 174 ESDKVVDINTVDGFQGREKDVAIFSCVRASKDKGIGFVADFRRMNVGITRARASVLVVGS 233
Query: 181 AGALTQSDDWAALIADSKARNCYMDM 206
A L + + W L+ ++ RNC + +
Sbjct: 234 ASTLKKDEHWNNLLESAEKRNCLLKV 259
>gi|327306928|ref|XP_003238155.1| tRNA-splicing endonuclease [Trichophyton rubrum CBS 118892]
gi|326458411|gb|EGD83864.1| tRNA-splicing endonuclease [Trichophyton rubrum CBS 118892]
Length = 2196
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 94/209 (44%), Positives = 126/209 (60%), Gaps = 4/209 (1%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL QYRMHP I FPS+ FY G+L D ++ L + ++ +L PY FFDV G S
Sbjct: 1633 LLDTQYRMHPEISKFPSQAFYDGKLQDGPAMGPLRKKPWHGSELLGPYRFFDV-QGMHSS 1691
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGL-GKVTVGIITPYKLQLKCLQHEFRNVLN 120
S N+ E + LYE L ++ GK+ GIITPYK QL+ L+ F
Sbjct: 1692 ATKGHSLVNIAELTVAMRLYERLLADYRNYEFAGKI--GIITPYKGQLRELKSRFAAKYG 1749
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGN 180
S + NT DAFQG+E +VII SCVRAS+ G+GF++DIRRMNV LTRA+ +LWV+GN
Sbjct: 1750 SSIFTTVEFNTTDAFQGRECEVIIFSCVRASDRGIGFLSDIRRMNVGLTRAKSSLWVLGN 1809
Query: 181 AGALTQSDDWAALIADSKARNCYMDMDSL 209
+ +L + + W ALI D++ R Y + D L
Sbjct: 1810 SQSLVRGEFWRALIHDARERQLYTEGDIL 1838
>gi|428178714|gb|EKX47588.1| hypothetical protein GUITHDRAFT_137364 [Guillardia theta CCMP2712]
Length = 1135
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 93/234 (39%), Positives = 133/234 (56%), Gaps = 22/234 (9%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPD-EVYYKDPVLRPYVFFDVIHGRES 60
LL+VQYRMHP I FPS +FY+GRL D+E++ + E Y DP P+ FFD+I +E
Sbjct: 653 LLNVQYRMHPEITRFPSEYFYEGRLVDAENLGRRKEGERYQADPWFGPFHFFDLIDSKEQ 712
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
GS S +NV EAKF L + L G K + I+TPY+ Q + + ++
Sbjct: 713 RSDGS-SLRNVAEAKFVALLVKELISRYSQRGELKGKIAILTPYRQQRNEITSSLKRLVG 771
Query: 121 SE------------------EGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIR 162
G + + TVD+ QGQERD++I SCVRA+ GVGF+ D+R
Sbjct: 772 PHAVSESVENRSPEVVTELARGYSIDVMTVDSCQGQERDIVIFSCVRANTRGVGFLEDVR 831
Query: 163 RMNVALTRARRALWVMGNAGALTQSDDWAALIADSKARN--CYMDMDSLPKEFS 214
RMNVALTRAR +L V+GN+ +L S+ W A +A++K R ++ +P +F+
Sbjct: 832 RMNVALTRARHSLLVIGNSNSLKASEPWKAFLANAKKRERVTVIESKKMPPDFT 885
>gi|296823782|ref|XP_002850498.1| helicase SEN1 [Arthroderma otae CBS 113480]
gi|238838052|gb|EEQ27714.1| helicase SEN1 [Arthroderma otae CBS 113480]
Length = 1528
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 92/207 (44%), Positives = 125/207 (60%), Gaps = 4/207 (1%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL QYRMHP I FPS+ FY G+L D + L + ++ +L PY FFDV G S+
Sbjct: 963 LLDTQYRMHPEISKFPSQAFYDGKLQDGPGMGPLRKKPWHGSELLGPYRFFDV-QGMHSN 1021
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGL-GKVTVGIITPYKLQLKCLQHEFRNVLN 120
S N+ E + LY+ L K+ GK+ GIITPYK QL+ L+ F
Sbjct: 1022 AAKGHSLVNIAELTVAMRLYDRLLADYKNYDFTGKI--GIITPYKGQLRELKARFAAKYG 1079
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGN 180
+ NT DAFQG+E ++II SCVRAS+ G+GF++DIRRMNV LTRA+ +LWV+GN
Sbjct: 1080 GSIFTAVEFNTTDAFQGRECEIIIFSCVRASSRGIGFLSDIRRMNVGLTRAKSSLWVLGN 1139
Query: 181 AGALTQSDDWAALIADSKARNCYMDMD 207
+ +L Q + W ALI D++ R+ Y + D
Sbjct: 1140 SQSLVQGEFWRALIHDAQGRDLYTEGD 1166
>gi|346325571|gb|EGX95168.1| tRNA-splicing endonuclease, putative [Cordyceps militaris CM01]
Length = 2040
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 97/225 (43%), Positives = 135/225 (60%), Gaps = 8/225 (3%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRE-S 60
LL +QYRMHP I FPS+ FY+G+L D + + L + ++K +L PY FFDV +E
Sbjct: 1623 LLDMQYRMHPEISLFPSKEFYEGQLRDGQDMAGLRQQPWHKSALLGPYRFFDVQGVQERG 1682
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGL-GKVTVGIITPYKLQLKCLQHEFRNVL 119
HRG S+ N E + + +Y+ +K L GK+ GIITPYK QL L+ FR
Sbjct: 1683 HRGQSLV--NTRELEVALQMYDRFRKEYSECNLVGKI--GIITPYKAQLFELRKRFRARY 1738
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRALWVM 178
+ + NT DAFQG+E ++II SCVRAS G+GF+ DIRRMNV LTRA+ +LW++
Sbjct: 1739 GEDICDIIEFNTTDAFQGRECEIIIFSCVRASATGGIGFMTDIRRMNVGLTRAKSSLWIL 1798
Query: 179 GNAGALTQSDDWAALIADSKARNCYMDMDSLPKEFSVALAAKAPG 223
G++ AL Q + W LI D+K+R+ + D + F L PG
Sbjct: 1799 GDSRALVQGEFWKKLIEDAKSRDRFTQGD-IVNMFRKPLERAKPG 1842
>gi|297735762|emb|CBI18449.3| unnamed protein product [Vitis vinifera]
Length = 2154
Score = 167 bits (424), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 97/236 (41%), Positives = 137/236 (58%), Gaps = 19/236 (8%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEV--YYKDPVLRPYVFFDVIHGRE 59
+L+ QYRMHP I FPS HFY +L + E N+ ++ +++ L PYVFFDV+ G+E
Sbjct: 1702 MLTKQYRMHPEICRFPSLHFYDSKLLNGE---NMSSKLAPFHETEGLGPYVFFDVVDGQE 1758
Query: 60 SH--RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRN 117
SH G+ S N EA V + +K S +G +GIITPYK QL L+ F +
Sbjct: 1759 SHGRNSGTFSLCNEREADAAVEVLRLFRKRHPSEFVGG-RIGIITPYKCQLSLLRSRFSS 1817
Query: 118 VLNSEEGKDLYINTVDAFQGQERDVIIMSCVRAS----------NHGVGFVADIRRMNVA 167
S D+ NTVD FQG+E D++++S VRA+ + +GFVAD+RRMNVA
Sbjct: 1818 AFGSSITSDMEFNTVDGFQGREVDILVLSTVRAAGPCSAASGINSSSIGFVADVRRMNVA 1877
Query: 168 LTRARRALWVMGNAGALTQSDDWAALIADSKARNCYMDMDSLPKEFSVALAAKAPG 223
LTRA+ +LW++GNA L + +WAAL+ D+K RN + +P + A K P
Sbjct: 1878 LTRAKLSLWILGNARTLQTNCNWAALVKDAKERNLVISA-KMPYQSMFKKALKNPS 1932
>gi|410075095|ref|XP_003955130.1| hypothetical protein KAFR_0A05600 [Kazachstania africana CBS 2517]
gi|372461712|emb|CCF55995.1| hypothetical protein KAFR_0A05600 [Kazachstania africana CBS 2517]
Length = 2250
Score = 167 bits (424), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 80/203 (39%), Positives = 125/203 (61%), Gaps = 2/203 (0%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL+VQYRMHP I FPS FY G L D ++ + ++ P L PY FF+++ GR+
Sbjct: 1620 LLNVQYRMHPAISYFPSSEFYGGLLKDGPNMDAINQRPWHNTPPLTPYKFFNIVSGRQEQ 1679
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
++SY N++E K + L ++L + K +GII+PY+ Q++ ++ EF +
Sbjct: 1680 NSKTMSYTNIEEIKVAIELIDYLFRNFDQKVNFKGKIGIISPYREQMQKMRREFVVYFGA 1739
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRA--SNHGVGFVADIRRMNVALTRARRALWVMG 179
+ NT+D FQGQE+++II+SCVRA ++ VGF+ D RRMNVA TRA+ ++W++G
Sbjct: 1740 SIKNFIDFNTIDGFQGQEKEIIIISCVRADDTSSSVGFLKDFRRMNVAFTRAKTSMWILG 1799
Query: 180 NAGALTQSDDWAALIADSKARNC 202
+ +L ++ W LI DS R+C
Sbjct: 1800 HQKSLYKNKLWRNLIDDSSRRDC 1822
>gi|154291609|ref|XP_001546386.1| hypothetical protein BC1G_15073 [Botryotinia fuckeliana B05.10]
Length = 2019
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 93/210 (44%), Positives = 126/210 (60%), Gaps = 5/210 (2%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL QYRMHP I FPS+ FY RL D + + L + ++ +L PY FFDV+ G +S
Sbjct: 1641 LLDTQYRMHPEISRFPSQQFYNSRLIDGDGMAQLRVQPWHASSILGPYRFFDVV-GVQSK 1699
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGL-GKVTVGIITPYKLQLKCLQHEFRNVLN 120
S NV E + LY+ L+ +S GK+ GIIT YK QL L+ F
Sbjct: 1700 EARGHSLINVPELNAAIQLYQRLKTDYRSYDFRGKI--GIITTYKAQLNELKRRFGAKFG 1757
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRA-SNHGVGFVADIRRMNVALTRARRALWVMG 179
E +++ NT DAFQG+ER++II SCVRA + G+GF+ DIRRMNV LTRA+ +LWV+G
Sbjct: 1758 DEIFEEIEFNTTDAFQGREREIIIFSCVRAKAAGGIGFLNDIRRMNVGLTRAKSSLWVLG 1817
Query: 180 NAGALTQSDDWAALIADSKARNCYMDMDSL 209
++ AL Q + W LI D+K+R Y D +
Sbjct: 1818 DSRALEQGEFWNRLIQDAKSRERYTSGDIM 1847
>gi|448105212|ref|XP_004200439.1| Piso0_003026 [Millerozyma farinosa CBS 7064]
gi|448108344|ref|XP_004201070.1| Piso0_003026 [Millerozyma farinosa CBS 7064]
gi|359381861|emb|CCE80698.1| Piso0_003026 [Millerozyma farinosa CBS 7064]
gi|359382626|emb|CCE79933.1| Piso0_003026 [Millerozyma farinosa CBS 7064]
Length = 1934
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 89/205 (43%), Positives = 123/205 (60%), Gaps = 3/205 (1%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL +QYRMHP I FPS FY RL D E + L ++ D L PY FF+ I G+
Sbjct: 1599 LLDIQYRMHPDISRFPSAEFYNSRLHDGEGMKELNQREWHSDFPLSPYRFFN-ITGKHKQ 1657
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
+ S N EA+ + + + L K L +GII+PYK Q++ L+ FR
Sbjct: 1658 SEYTRSLYNYSEAQVALEMVKTLMKILPQNEFSG-RIGIISPYKEQIRVLKDVFRKNYGQ 1716
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVMGN 180
++ NTVD FQGQE+++IIMSCVRAS+ G VGF++D+RRMNVALTRAR LW++GN
Sbjct: 1717 TILNEIDFNTVDGFQGQEKEIIIMSCVRASDSGNVGFLSDVRRMNVALTRARTTLWILGN 1776
Query: 181 AGALTQSDDWAALIADSKARNCYMD 205
+L+++ W L+ D+K R+ D
Sbjct: 1777 KESLSRNKTWNHLLEDAKERDAVTD 1801
>gi|347832212|emb|CCD47909.1| similar to similar to tRNA-splicing endonuclease [Botryotinia
fuckeliana]
Length = 2019
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 93/210 (44%), Positives = 126/210 (60%), Gaps = 5/210 (2%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL QYRMHP I FPS+ FY RL D + + L + ++ +L PY FFDV+ G +S
Sbjct: 1641 LLDTQYRMHPEISRFPSQQFYNSRLIDGDGMAQLRVQPWHASSILGPYRFFDVV-GVQSK 1699
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGL-GKVTVGIITPYKLQLKCLQHEFRNVLN 120
S NV E + LY+ L+ +S GK+ GIIT YK QL L+ F
Sbjct: 1700 EARGHSLINVPELNAAIQLYQRLKTDYRSYDFRGKI--GIITTYKAQLNELKRRFGAKFG 1757
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRA-SNHGVGFVADIRRMNVALTRARRALWVMG 179
E +++ NT DAFQG+ER++II SCVRA + G+GF+ DIRRMNV LTRA+ +LWV+G
Sbjct: 1758 DEIFEEIEFNTTDAFQGREREIIIFSCVRAKAAGGIGFLNDIRRMNVGLTRAKSSLWVLG 1817
Query: 180 NAGALTQSDDWAALIADSKARNCYMDMDSL 209
++ AL Q + W LI D+K+R Y D +
Sbjct: 1818 DSRALEQGEFWNRLIQDAKSRERYTSGDIM 1847
>gi|255081534|ref|XP_002507989.1| predicted protein [Micromonas sp. RCC299]
gi|226523265|gb|ACO69247.1| predicted protein [Micromonas sp. RCC299]
Length = 1002
Score = 167 bits (423), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 85/205 (41%), Positives = 124/205 (60%), Gaps = 5/205 (2%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL QYRMHP IR+FPS FY G L D + ++ + + RP+VF DV G+E +
Sbjct: 601 LLKTQYRMHPAIREFPSTQFYSGELEDGPKMAAKTKRPWHDNMLFRPFVFIDVA-GKE-Y 658
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
+GG +S+ N DEA V L L K + G+ +G+I+PYK Q+K ++ L
Sbjct: 659 QGGGMSWANDDEATLAVALVATLVKNYAELASGE-KIGVISPYKAQVKNIRRRLAETLGE 717
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRA--SNHGVGFVADIRRMNVALTRARRALWVMG 179
E + + +N++D FQG+E+DV I S VRA G+GFVAD RR+NV LTR++ +L V+G
Sbjct: 718 ERARKVDVNSIDGFQGREKDVCIFSVVRAPAKGRGLGFVADERRINVGLTRSKSSLIVLG 777
Query: 180 NAGALTQSDDWAALIADSKARNCYM 204
+A AL D+W L+A ++ RN +
Sbjct: 778 SAKALKGDDNWGGLVASARDRNLIV 802
>gi|19112847|ref|NP_596055.1| tRNA-splicing endonuclease positive effector (predicted)
[Schizosaccharomyces pombe 972h-]
gi|74582870|sp|O94387.1|YGSA_SCHPO RecName: Full=Uncharacterized ATP-dependent helicase C29A10.10c
gi|4007798|emb|CAA22438.1| tRNA-splicing endonuclease positive effector (predicted)
[Schizosaccharomyces pombe]
Length = 1944
Score = 167 bits (422), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 91/209 (43%), Positives = 138/209 (66%), Gaps = 6/209 (2%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LLS+QYRM+P I FPS+ FY +L D ++ + +++DP L Y FF+V HG E+
Sbjct: 1578 LLSIQYRMNPEISRFPSKFFYNSKLLDGPNMSAVTSRPWHEDPQLGIYRFFNV-HGTEAF 1636
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGL-GKVTVGIITPYKLQLKCLQHEFRNVLN 120
S S NV+EA F + LYE L + ++ GK+ G++TPY+ Q++ L+ +F+
Sbjct: 1637 -SNSKSLYNVEEASFILLLYERLIQCYLNIDFEGKI--GVVTPYRSQVQQLRSQFQRKYG 1693
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRALWVMG 179
S K L I+TVD FQGQE+D+II SCVR+S + G+GF+ D+RR+NVALTRA+ +L+++G
Sbjct: 1694 SIIFKHLDIHTVDGFQGQEKDIIIFSCVRSSMSGGIGFLQDLRRLNVALTRAKSSLYIVG 1753
Query: 180 NAGALTQSDDWAALIADSKARNCYMDMDS 208
N+ L Q D + +LI D+K R + D+ +
Sbjct: 1754 NSKPLMQEDIFYSLIEDAKTRGVWRDLSA 1782
>gi|156056478|ref|XP_001594163.1| hypothetical protein SS1G_05593 [Sclerotinia sclerotiorum 1980]
gi|154703375|gb|EDO03114.1| hypothetical protein SS1G_05593 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 2021
Score = 167 bits (422), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 92/210 (43%), Positives = 127/210 (60%), Gaps = 5/210 (2%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL QYRMHP I FPS+ FY RL D + + L + ++ +L PY FFDV+ G +S
Sbjct: 1640 LLDTQYRMHPEISQFPSQQFYNSRLIDGDGMAQLRVQPWHASSILGPYRFFDVV-GVQSK 1698
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGL-GKVTVGIITPYKLQLKCLQHEFRNVLN 120
S NV E + LY+ L+ +S GK+ GIIT YK QL L+ F
Sbjct: 1699 ETKGHSLINVPELNAAIQLYQRLKTDYRSYDFRGKI--GIITTYKAQLNELKRRFGAKFG 1756
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRA-SNHGVGFVADIRRMNVALTRARRALWVMG 179
E +++ NT DAFQG+ER++II SCVRA + G+GF+ DIRRMNV LTRA+ +LWV+G
Sbjct: 1757 DEIFEEIEFNTTDAFQGREREIIIFSCVRAKAAGGIGFLNDIRRMNVGLTRAKSSLWVLG 1816
Query: 180 NAGALTQSDDWAALIADSKARNCYMDMDSL 209
++ AL Q + W LI D+++R+ Y D +
Sbjct: 1817 DSRALEQGEFWNRLIQDARSRSRYTSGDIM 1846
>gi|302689419|ref|XP_003034389.1| hypothetical protein SCHCODRAFT_52671 [Schizophyllum commune H4-8]
gi|300108084|gb|EFI99486.1| hypothetical protein SCHCODRAFT_52671 [Schizophyllum commune H4-8]
Length = 1958
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 109/322 (33%), Positives = 155/322 (48%), Gaps = 37/322 (11%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LLS+QYRMHP I PS+ FY RL D + + + DP Y FF+V G E
Sbjct: 1601 LLSIQYRMHPSISALPSKVFYDSRLKDGPDMEAKTKQPWQFDPKFGAYRFFNVFRGVED- 1659
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
R G+ S +N+ E + V LY L S G VGII YK Q+ L+ F N
Sbjct: 1660 RAGAKSSKNIAECEVAVALYSRLVTQFGSSGDFAAKVGIIAGYKGQIVELRRRFENRFGR 1719
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRA--SNHGVGFVADIRRMNVALTRARRALWVMG 179
+ K + NTVD FQGQE+DVII SCVRA +GF++D RRMNVALTRA+ +L+++G
Sbjct: 1720 DITKKIAFNTVDGFQGQEKDVIIFSCVRAGTGTTNIGFMSDTRRMNVALTRAKSSLFILG 1779
Query: 180 NAGALTQSDD-WAALIADSKARNCYMDMD-----------SLPKEFSVALAAKAPGYGPL 227
+A L++SD+ W ++AD+ R D+D S+PK + A ++
Sbjct: 1780 HADTLSRSDETWKQIVADANERKLMTDVDVSYFTAPITQTSVPKTPTKKAAPRSRVTSQN 1839
Query: 228 QGKIPHNARGLRSAGQRHRSFDMNMESRSGTPSEDDEKV-------------SRNGNYRP 274
P A + + S ++ + P+ +K+ NY P
Sbjct: 1840 AASAPPPANLMTPTALKKSSSKKDLAEAAAKPTSRKDKIDDQPIASSSSSAAPPAQNYAP 1899
Query: 275 FKPPLENSLDDFDQSGEKYRDA 296
PP ++GEK RD+
Sbjct: 1900 PAPP---------RAGEKRRDS 1912
>gi|303281096|ref|XP_003059840.1| superfamily I helicase [Micromonas pusilla CCMP1545]
gi|226458495|gb|EEH55792.1| superfamily I helicase [Micromonas pusilla CCMP1545]
Length = 1122
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 105/224 (46%), Positives = 129/224 (57%), Gaps = 10/224 (4%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
+LLSVQYRMHP IR FPSR FY+GRL DSESVI P E Y+ LRPYV FD G+E
Sbjct: 855 VLLSVQYRMHPEIRAFPSRAFYEGRLRDSESVIAAPPESYHASWPLRPYVLFDASQGKEK 914
Query: 61 HRG-GSVSYQNVDEAKFGVCLYEHLQKTL--KSMGLGKVTVGIITPYKLQLKCLQHEFRN 117
GSVS N EA V L L++TL K+ IITPYK Q ++ F
Sbjct: 915 RSTVGSVS--NPYEALIVVSLVRRLERTLWRKNGETVDGRCAIITPYKAQRSKIRDAFAR 972
Query: 118 VLNSEEGK---DLYINTVDAFQGQERDVIIMSCV--RASNHGVGFVADIRRMNVALTRAR 172
V E + ++TVD FQGQE DVII S V A G+GF+ D++RMNVALTRAR
Sbjct: 973 VYGDESAMHRLGIVVSTVDGFQGQEADVIIFSTVRGGAGRGGIGFLQDVKRMNVALTRAR 1032
Query: 173 RALWVMGNAGALTQSDDWAALIADSKARNCYMDMDSLPKEFSVA 216
R+LW++G AL + W L+ D++ R C + L VA
Sbjct: 1033 RSLWIVGRVDALEGNPMWKDLVDDARERGCVVPDSELGDVLEVA 1076
>gi|400600684|gb|EJP68352.1| helicase sen1 [Beauveria bassiana ARSEF 2860]
Length = 3005
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 91/208 (43%), Positives = 128/208 (61%), Gaps = 5/208 (2%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL +QYRMHP I FPS+ FY+G+L D + + L + +++ +L PY FFDV +E
Sbjct: 1625 LLDMQYRMHPEISMFPSKEFYEGQLRDGQDMAGLRQQPWHRSALLGPYRFFDVQGVQERG 1684
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGL-GKVTVGIITPYKLQLKCLQHEFRNVLN 120
R G S N E + +Y+ +K L GK+ GIITPYK QL L++ FR
Sbjct: 1685 RRGQ-SLVNTRELDVALQMYDRFRKDYSDCNLVGKI--GIITPYKAQLFELRNRFRARYG 1741
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRALWVMG 179
+ + NT DAFQG+E ++II SCVRAS G+GF+ DIRRMNV LTRA+ +LW++G
Sbjct: 1742 EDITDIIEFNTTDAFQGRECEIIIFSCVRASATGGIGFMTDIRRMNVGLTRAKSSLWILG 1801
Query: 180 NAGALTQSDDWAALIADSKARNCYMDMD 207
++ AL Q + W LI D+++R+ Y D
Sbjct: 1802 DSRALVQGEFWKKLIEDAQSRDRYTQGD 1829
>gi|345562914|gb|EGX45922.1| hypothetical protein AOL_s00112g111 [Arthrobotrys oligospora ATCC
24927]
Length = 1999
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 87/206 (42%), Positives = 129/206 (62%), Gaps = 7/206 (3%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LLS+QYRMHP I FPS FY +L D + L + +++ PY FF+V+ G+E+
Sbjct: 1601 LLSIQYRMHPAISSFPSEMFYNSQLEDGPDMTMLRSQPWHQSLFFGPYRFFNVV-GQEAM 1659
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGL-GKVTVGIITPYKLQLKCLQHEFRNVLN 120
G S+ +N+ E + +Y+ L GK+ GIITPYK QL L+ +F + N
Sbjct: 1660 SGHSM--KNIHEVNVALMIYKRLVADFPETNFSGKI--GIITPYKTQLHALRQKFVDTYN 1715
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVMG 179
+ + + NT DAFQG+ER++II SCVRAS +GF++DIRRMNV LTRAR +L+V+G
Sbjct: 1716 DQILRTIEFNTTDAFQGREREIIIFSCVRASQKSTIGFLSDIRRMNVGLTRARSSLFVLG 1775
Query: 180 NAGALTQSDDWAALIADSKARNCYMD 205
NA L +++ WA+L+ +++ R Y +
Sbjct: 1776 NANTLKKNEFWASLVENAQDRGYYTE 1801
>gi|46128545|ref|XP_388826.1| hypothetical protein FG08650.1 [Gibberella zeae PH-1]
Length = 2078
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 100/235 (42%), Positives = 139/235 (59%), Gaps = 11/235 (4%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDV--IHGRE 59
LL +QYRMHP I FPSR FY+G+L D +++ L + +++ +L PY FFDV + R
Sbjct: 1656 LLDMQYRMHPEISMFPSREFYEGQLADGQNMHELRQQPWHQSALLGPYRFFDVQGVQAR- 1714
Query: 60 SHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGL-GKVTVGIITPYKLQLKCLQHEFRNV 118
H+G S+ N E + +Y+ L GK+ GIITPYK QL L++ FR+
Sbjct: 1715 GHKGQSLV--NTRELDVAMQMYDRFSNEYGDCDLTGKI--GIITPYKAQLFELRNRFRSR 1770
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWV 177
+ NT DAFQG+E ++II SCVRAS+ G +GF+ DIRRMNV LTRA+ +LW+
Sbjct: 1771 YGEGITDIIEFNTTDAFQGRECEIIIFSCVRASSTGGIGFMTDIRRMNVGLTRAKSSLWI 1830
Query: 178 MGNAGALTQSDDWAALIADSKARNCYMDMDSLPKEFSVALAAKAPG-YGPLQGKI 231
+G++ AL Q + W LI D+++R+ Y D L F L PG Y P KI
Sbjct: 1831 LGDSRALVQGEFWKKLIEDAQSRDRYTKGDIL-SMFRKPLEKAKPGAYLPPPSKI 1884
>gi|294655237|ref|XP_002770105.1| DEHA2B08822p [Debaryomyces hansenii CBS767]
gi|199429794|emb|CAR65475.1| DEHA2B08822p [Debaryomyces hansenii CBS767]
Length = 1968
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 89/202 (44%), Positives = 123/202 (60%), Gaps = 3/202 (1%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL VQYRMHP I FPS FY RL D E + ++KD L PY+FFD++ G+
Sbjct: 1622 LLDVQYRMHPAISKFPSSEFYFSRLHDGEGMAAKNSRPWHKDYPLSPYMFFDIV-GKHQQ 1680
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
S S N EA+ + L + L + L +GII+PYK Q++ L+ F+
Sbjct: 1681 NELSRSLFNYAEAQVALELVDKLIQILPQTEFSG-RIGIISPYKEQIRTLKDVFKRKYGH 1739
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVMGN 180
++ NTVD FQGQE+++IIMSCVRAS G VGF++D+RRMNVALTRAR +LW++GN
Sbjct: 1740 SILSEIDFNTVDGFQGQEKEIIIMSCVRASESGNVGFLSDVRRMNVALTRARTSLWILGN 1799
Query: 181 AGALTQSDDWAALIADSKARNC 202
+L+++ W L+ D+ RN
Sbjct: 1800 KKSLSRNTVWKRLLDDAAERNA 1821
>gi|310791058|gb|EFQ26587.1| helicase sen1 [Glomerella graminicola M1.001]
Length = 2076
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 96/228 (42%), Positives = 131/228 (57%), Gaps = 4/228 (1%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL QYRMHP I FPS FY+G+L D E + L + ++ +L PY FFDV G +S
Sbjct: 1648 LLDRQYRMHPEISLFPSMEFYEGKLVDGEDMSALRCQPWHATALLGPYRFFDV-EGTQSK 1706
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
S N E K + LYE + K +GIITPYK QL+ L+ +F
Sbjct: 1707 GSKGRSLVNHAELKVAMQLYERFKADFGRNYDIKGKIGIITPYKAQLQELKWQFSRQFGD 1766
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRALWVMGN 180
D+ NT DAFQG+E ++II SCVRA G+GFV DIRRMNV LTRA+ +LW++G+
Sbjct: 1767 NITDDIEFNTTDAFQGRECEIIIFSCVRADPTGGIGFVKDIRRMNVGLTRAKSSLWILGD 1826
Query: 181 AGALTQSDDWAALIADSKARNCYM--DMDSLPKEFSVALAAKAPGYGP 226
+ AL Q + W LI ++K R+ Y D+ S+ ++ SV + + P P
Sbjct: 1827 SRALVQGEFWNKLIDNAKQRSLYTKGDIMSMLRKPSVIMKSLPPLPTP 1874
>gi|213408549|ref|XP_002175045.1| helicase sen1 [Schizosaccharomyces japonicus yFS275]
gi|212003092|gb|EEB08752.1| helicase sen1 [Schizosaccharomyces japonicus yFS275]
Length = 1974
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/223 (42%), Positives = 135/223 (60%), Gaps = 8/223 (3%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
LLS+QYRMHP I FPS +FY RL D + L ++ DP Y FFDV RES
Sbjct: 1581 FLLSIQYRMHPEISRFPSSYFYGSRLLDGPDMQKLTARPWHHDPTFGIYRFFDV-RTRES 1639
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGL-GKVTVGIITPYKLQLKCLQHEFRNVL 119
Y N +EA F + LY+ L + ++ + GKV GI+TPY+ QL+ L+ +F
Sbjct: 1640 SSITKSVY-NPEEASFVLTLYDKLVQDYINVDMEGKV--GIVTPYRRQLQELRMQFERRY 1696
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRALWVM 178
K + NTVD FQGQE+D+I+ SCVR G+GF++D RR+NVALTRA+ +L+++
Sbjct: 1697 GPLIFKRVDFNTVDGFQGQEKDIILFSCVRGDMGGGIGFLSDTRRLNVALTRAKSSLYII 1756
Query: 179 GNAGALTQSDDWAALIADSKARNCYM--DMDSLPKEFSVALAA 219
GN G LT+ W+ALI D++ R+C + +D L + S A+ +
Sbjct: 1757 GNVGTLTKDKMWSALITDAQTRSCLVTSSIDQLRRSQSYAIQS 1799
>gi|389744605|gb|EIM85787.1| hypothetical protein STEHIDRAFT_58796 [Stereum hirsutum FP-91666 SS1]
Length = 2031
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/209 (41%), Positives = 127/209 (60%), Gaps = 5/209 (2%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LLS+QYRMHP I PS FY GRL D ++ ++ P Y FF+V +G+ES
Sbjct: 1613 LLSIQYRMHPDISQLPSALFYNGRLQDGPGMVEKTKRPWHTSPKFGTYRFFNVTNGQESQ 1672
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
G S SY N E + V L+ L++ S+ VG+++ Y+ Q+ L+ F
Sbjct: 1673 -GSSHSYMNTAEVRIAVSLFHRLRQEFSSVDFD-FRVGVVSMYREQIFSLRRAFEQRFGR 1730
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASN--HGVGFVADIRRMNVALTRARRALWVMG 179
E + NTVD FQGQE+D+II+SCVRA VGF+AD+RRMNVALTR+R +L+++G
Sbjct: 1731 EIIGKVDFNTVDGFQGQEKDIIILSCVRAGPGVQTVGFLADVRRMNVALTRSRASLFILG 1790
Query: 180 NAGALTQSD-DWAALIADSKARNCYMDMD 207
+A L +SD +W A++ D+++R+ D+D
Sbjct: 1791 HAPTLERSDQNWKAIVTDARSRSRLFDVD 1819
>gi|298715587|emb|CBJ28140.1| hypothetical protein Esi_0092_0081 [Ectocarpus siliculosus]
Length = 1244
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 89/218 (40%), Positives = 135/218 (61%), Gaps = 16/218 (7%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLP--DEVYYKDPVLRPYVFFDVIHGRE 59
+L VQYRMHP I FPS FY G+L D +V ++P ++ P+ +P++FFD+ G +
Sbjct: 555 MLDVQYRMHPTISAFPSATFYDGKLKDGGNV-SMPAYSRAFHTHPIFQPFMFFDLTTGEQ 613
Query: 60 SHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMG----------LGKVTVGIITPYKLQLK 109
+ RGG S N EA V +Y L+++ +G G+V G+I+PY Q+K
Sbjct: 614 TRRGGGGSLSNPMEAMLAVNVYVTLKRSFGGVGERGSGDEHGIAGRV--GVISPYAKQIK 671
Query: 110 CLQHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVAL 168
L+ +F L + + I+TVDAFQG+E+DVII+S VRA+ + G+GF+AD+RRMNVAL
Sbjct: 672 VLKEKFEESLGRGWHEQVEISTVDAFQGREKDVIIVSTVRAAGSRGIGFLADVRRMNVAL 731
Query: 169 TRARRALWVMGNAGALTQSDDWAALIADSKARNCYMDM 206
TRAR L+V+G+A AL+ + W L +++R + +
Sbjct: 732 TRARHGLFVVGSAEALSVNPKWKELADLAESREGLVKV 769
>gi|348684269|gb|EGZ24084.1| hypothetical protein PHYSODRAFT_359182 [Phytophthora sojae]
Length = 2487
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 88/207 (42%), Positives = 127/207 (61%), Gaps = 7/207 (3%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEV---YYKDPVLRPYVFFDVIHGR 58
+L VQYRMHP +RDFPS+ FY G LTD SV+ +V Y +P++ +DV + R
Sbjct: 1857 MLRVQYRMHPFLRDFPSKRFYGGMLTDGPSVMERVQKVCPGVYAHTSFQPFLLYDVENSR 1916
Query: 59 ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV 118
E GS Y V EA F + L +++ +T+ + K +VG ++PYK Q++ L+ E
Sbjct: 1917 EEDMNGS-KYNRV-EAAFCISLCQNMFETIADVRKNKWSVGFVSPYKEQVRVLRQEITKS 1974
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWV 177
+ +NTVD FQG+E+DVII SCVRAS G +GF+ DIRR+NVA+TRAR L+V
Sbjct: 1975 -GIPTTVSIEVNTVDGFQGREKDVIIFSCVRASKRGGIGFLRDIRRLNVAITRARFCLYV 2033
Query: 178 MGNAGALTQSDDWAALIADSKARNCYM 204
+GN L + + WAAL+ ++ R +
Sbjct: 2034 VGNVNTLVRDETWAALVKSARDRKLII 2060
>gi|367042072|ref|XP_003651416.1| hypothetical protein THITE_2111680 [Thielavia terrestris NRRL 8126]
gi|346998678|gb|AEO65080.1| hypothetical protein THITE_2111680 [Thielavia terrestris NRRL 8126]
Length = 2051
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 97/236 (41%), Positives = 137/236 (58%), Gaps = 10/236 (4%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL +QYRMHP I FPS+ FY+G L D + L + +++ +L PY FFDV G +
Sbjct: 1631 LLDMQYRMHPEISRFPSKVFYEGLLQDGADMGKLRLQPWHQSVLLGPYRFFDV-KGSQER 1689
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
+ S N +E K + LY + ++ L K +GIITPYK QL L+ F
Sbjct: 1690 GPKNQSLVNEEELKVALQLYRRFRTDYSNVDL-KGKIGIITPYKAQLFRLRQRFTEKYGE 1748
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRALWVMGN 180
+++ NT DAFQG+E ++II SCVRAS G+GF+ DIRRMNV LTRA+ +LW++G+
Sbjct: 1749 GITEEIEFNTTDAFQGRECEIIIFSCVRASPTGGIGFMTDIRRMNVGLTRAKSSLWILGD 1808
Query: 181 AGALTQSDDWAALIADSKARNCYMDMDSL-------PKEFSVALAAKAPGYGPLQG 229
+ AL Q + WA LI D+K R+ Y + + + PK +LAA +P QG
Sbjct: 1809 SRALVQGEFWAKLIEDAKQRDRYTNGNIMALLSQPGPKVPLASLAAPSPRPTEAQG 1864
>gi|336264808|ref|XP_003347180.1| hypothetical protein SMAC_05480 [Sordaria macrospora k-hell]
gi|380093874|emb|CCC08839.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 2146
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 100/260 (38%), Positives = 136/260 (52%), Gaps = 22/260 (8%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL QYRMHP I FP FY+G L D + + + +++ +L PY FFDV G +
Sbjct: 1634 LLDTQYRMHPEISSFPREAFYEGLLQDGDGMAKSRLQPWHRSALLGPYRFFDV-RGLQER 1692
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
+ S N +E K + LY + + L K +GIITPYK QL L+ +F
Sbjct: 1693 GPKNQSLVNEEELKVAMQLYRRFKADYGDVDL-KGKIGIITPYKAQLHRLRSQFAQRFGD 1751
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRALWVMGN 180
++ NT DAFQG+E ++II SCVRAS G+GF+ DIRRMNV LTRAR +LW++G+
Sbjct: 1752 AITDEIEFNTTDAFQGRECEIIIFSCVRASPTGGIGFMTDIRRMNVGLTRARSSLWILGD 1811
Query: 181 AGALTQSDDWAALIADSKARNCYMDMDSLPKEFSVALAAKAPGYGPLQGKIPHNARGLRS 240
+ AL Q + WA LI DSK R+ Y G + G + L
Sbjct: 1812 SRALMQGEFWAKLIEDSKKRDRYTT-------------------GNIMGMLSQTGPRLSE 1852
Query: 241 AGQRHRSFDMNMESRSGTPS 260
A R + + +SR GTPS
Sbjct: 1853 AAFRALAITSSDDSRDGTPS 1872
>gi|116193595|ref|XP_001222610.1| hypothetical protein CHGG_06515 [Chaetomium globosum CBS 148.51]
gi|88182428|gb|EAQ89896.1| hypothetical protein CHGG_06515 [Chaetomium globosum CBS 148.51]
Length = 2053
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 90/203 (44%), Positives = 124/203 (61%), Gaps = 3/203 (1%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL +QYRMHP I FPS+ FY+G L D + L + +++ +L PY FFDV G +S
Sbjct: 1633 LLDMQYRMHPEISKFPSKEFYEGLLQDGADMGQLRMQPWHQSELLGPYRFFDV-KGSQSR 1691
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
+ S N +E K + LY + ++ L K +GIITPYK QL L+ F
Sbjct: 1692 GPRNQSLVNDEELKVAMQLYHRFRTDYGNVEL-KGKIGIITPYKAQLFRLRQRFAEKYGD 1750
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRALWVMGN 180
+++ NT DAFQG+E ++II SCVRAS G+GF+ DIRRMNV LTRAR +LW++G+
Sbjct: 1751 GIAEEIEFNTTDAFQGRECEIIIFSCVRASPTGGIGFMTDIRRMNVGLTRARSSLWILGD 1810
Query: 181 AGALTQSDDWAALIADSKARNCY 203
+ AL Q + W LI D+K R+ Y
Sbjct: 1811 SRALVQGEFWGKLIEDAKERDRY 1833
>gi|408388581|gb|EKJ68262.1| hypothetical protein FPSE_11565 [Fusarium pseudograminearum CS3096]
Length = 2079
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 96/226 (42%), Positives = 135/226 (59%), Gaps = 10/226 (4%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDV--IHGRE 59
LL +QYRMHP I FPSR FY+G+L D +++ L + +++ +L PY FFDV + R
Sbjct: 1656 LLDMQYRMHPEISMFPSREFYEGQLADGQNMHELRQQPWHQSALLGPYRFFDVQGVQAR- 1714
Query: 60 SHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGL-GKVTVGIITPYKLQLKCLQHEFRNV 118
H+G S+ N E + +Y+ L GK+ GIITPYK QL L++ FR+
Sbjct: 1715 GHKGQSLV--NTRELDVAMQMYDRFSNEYGECDLTGKI--GIITPYKAQLFELRNRFRSR 1770
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWV 177
+ NT DAFQG+E ++II SCVRAS+ G +GF+ DIRRMNV LTRA+ +LW+
Sbjct: 1771 YGEGITNIIEFNTTDAFQGRECEIIIFSCVRASSTGGIGFMTDIRRMNVGLTRAKSSLWI 1830
Query: 178 MGNAGALTQSDDWAALIADSKARNCYMDMDSLPKEFSVALAAKAPG 223
+G++ AL Q + W LI D+++R+ Y D L F L PG
Sbjct: 1831 LGDSRALVQGEFWKKLIEDAQSRDRYTKGDIL-SMFRKPLEKAKPG 1875
>gi|356528070|ref|XP_003532628.1| PREDICTED: probable helicase DDB_G0274399-like [Glycine max]
Length = 939
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 85/206 (41%), Positives = 120/206 (58%), Gaps = 2/206 (0%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
+L QYRMHP IR FPSR FY+ L D + V + ++ P+ FFD+ G+E+
Sbjct: 664 MLKTQYRMHPEIRSFPSREFYEDSLEDGDEVKSRTIRAWHDYRCFGPFCFFDIHEGKEAR 723
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
GS S+ NV+E F + LY+ L ++ G V II+PY Q+K Q F
Sbjct: 724 PPGSGSWINVEEVDFVLFLYQKLISLYPTLKSGN-QVAIISPYSQQVKLFQKRFEETFGM 782
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRALWVMGN 180
K + I TVD QG+E+D+ I SCVRAS + G+GFV DIRRMNV +TRA+ A+ V+G+
Sbjct: 783 SAEKVVDICTVDGCQGREKDIAIFSCVRASKDKGIGFVEDIRRMNVGITRAKSAVLVVGS 842
Query: 181 AGALTQSDDWAALIADSKARNCYMDM 206
A L +S+ W L+ ++ RNC +
Sbjct: 843 ASTLRRSEQWNKLVESAEKRNCLFKV 868
>gi|365991108|ref|XP_003672383.1| hypothetical protein NDAI_0J02480 [Naumovozyma dairenensis CBS 421]
gi|343771158|emb|CCD27140.1| hypothetical protein NDAI_0J02480 [Naumovozyma dairenensis CBS 421]
Length = 2238
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 84/237 (35%), Positives = 134/237 (56%), Gaps = 18/237 (7%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL+VQYRMHP I FPS FYQG+L D S+ + +++ PY FFD+ G++
Sbjct: 1618 LLNVQYRMHPDISKFPSEEFYQGKLKDGPSMDIINRRPWHQMVPFAPYKFFDISTGKQQQ 1677
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
++SY N++E + + L + L + +G+I+PY+ Q++ ++ EF
Sbjct: 1678 NSKTMSYVNLEEIQVAIELVDKLFNEFDAKIDFTGKIGVISPYREQMQRMRREFTRYFGG 1737
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRA--SNHGVGFVADIRRMNVALTRARRALWVMG 179
K + NT+D FQGQE+++I++SCVRA + VGF+ D RRMNVA TRA+ ++W++G
Sbjct: 1738 SISKSIDFNTIDGFQGQEKEIILISCVRADDTKTSVGFLKDFRRMNVAFTRAKTSMWILG 1797
Query: 180 NAGALTQSDDWAALIADSKARNCYMDMDSLPKEFSVALAAKAPGYGPLQGKIPHNAR 236
+ +L ++ W LI D+++R+C L PG+ L GK N+R
Sbjct: 1798 HQQSLLKNKLWKHLINDARSRDC--------------LVVAKPGF--LNGKTLSNSR 1838
>gi|363754976|ref|XP_003647703.1| hypothetical protein Ecym_7029 [Eremothecium cymbalariae DBVPG#7215]
gi|356891739|gb|AET40886.1| hypothetical protein Ecym_7029 [Eremothecium cymbalariae DBVPG#7215]
Length = 2019
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 123/203 (60%), Gaps = 2/203 (0%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL VQYRMH I FPS FY G+L D + N+ +++ PY FFD++ G++
Sbjct: 1625 LLDVQYRMHSMISSFPSLEFYDGKLKDGPDMDNINQRQWHETQPFAPYKFFDILTGKQQQ 1684
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
++SY N DE + + + + L + + +GII+PY+ Q++ ++ FR+
Sbjct: 1685 NAKTMSYVNYDECQVSIEMVDKLLRLYEKKVDFTGKIGIISPYREQMQMMKKAFRSYFGG 1744
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRA--SNHGVGFVADIRRMNVALTRARRALWVMG 179
+ NT+D FQGQE+++II+SCVRA S + VGF+ D RRMNVALTRA+ +LW++G
Sbjct: 1745 TIFTYIDFNTIDGFQGQEKEIIIISCVRADDSKNNVGFLKDFRRMNVALTRAKTSLWILG 1804
Query: 180 NAGALTQSDDWAALIADSKARNC 202
+ +L ++ W LI+D+K R C
Sbjct: 1805 HHKSLCRNKLWMNLISDAKTRGC 1827
>gi|302308150|ref|NP_984975.2| AER115Wp [Ashbya gossypii ATCC 10895]
gi|299789319|gb|AAS52799.2| AER115Wp [Ashbya gossypii ATCC 10895]
gi|374108198|gb|AEY97105.1| FAER115Wp [Ashbya gossypii FDAG1]
Length = 2027
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 81/203 (39%), Positives = 124/203 (61%), Gaps = 2/203 (0%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL VQYRMH I FPS FY GRL + ++ + +++ PY FFD+I G++
Sbjct: 1622 LLDVQYRMHSMISAFPSLEFYDGRLKNGPNMDQVNTRPWHESQPFGPYRFFDIITGKQQQ 1681
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
++SY N DE + + + + L + +GII+PY+ Q++ ++ FR+
Sbjct: 1682 NAKTMSYVNYDECQVSIEMIDKLLSQYEKKVDFSGKIGIISPYREQMQMMKRAFRSYFGG 1741
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRA--SNHGVGFVADIRRMNVALTRARRALWVMG 179
K + NT+D FQGQE+++II+SCVRA S GVGF+ D RRMNVALTRA+ +LW++G
Sbjct: 1742 TIFKYIDFNTIDGFQGQEKEIIIISCVRADDSKGGVGFLKDFRRMNVALTRAKASLWILG 1801
Query: 180 NAGALTQSDDWAALIADSKARNC 202
+ +L ++ W LI+D+K R+C
Sbjct: 1802 HHKSLYKNKLWMHLISDAKGRDC 1824
>gi|330917057|ref|XP_003297659.1| hypothetical protein PTT_08146 [Pyrenophora teres f. teres 0-1]
gi|330935060|ref|XP_003304815.1| hypothetical protein PTT_17500 [Pyrenophora teres f. teres 0-1]
gi|311318413|gb|EFQ87087.1| hypothetical protein PTT_17500 [Pyrenophora teres f. teres 0-1]
gi|311329531|gb|EFQ94249.1| hypothetical protein PTT_08146 [Pyrenophora teres f. teres 0-1]
Length = 1967
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 86/206 (41%), Positives = 121/206 (58%), Gaps = 3/206 (1%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL QYRMHP I FPS+ FY G+L D + +L + +++ +L PY FFDV G++
Sbjct: 1587 LLDTQYRMHPEISLFPSQTFYDGKLLDGGDMASLRKQPWHQSSLLGPYRFFDV-KGQQQK 1645
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
S N+ E + LY L K +GIITPYK QL+ ++ F
Sbjct: 1646 APSGKSLMNIAEINVALQLYNRLTSDYPDYNF-KGKIGIITPYKSQLQEIKQRFMKAYGQ 1704
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGNA 181
+D+ NT DAFQG+E ++II SCVRA N G+GF+ D+RRMNV LTRA+ +LWV+GN+
Sbjct: 1705 TIIEDIDFNTTDAFQGRESEIIIFSCVRA-NGGIGFLDDVRRMNVGLTRAKSSLWVLGNS 1763
Query: 182 GALTQSDDWAALIADSKARNCYMDMD 207
+L + W LI +++AR + D D
Sbjct: 1764 ASLQSGEFWNKLIVNAQARKRFTDGD 1789
>gi|406861529|gb|EKD14583.1| hypothetical protein MBM_07304 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 1997
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 96/239 (40%), Positives = 133/239 (55%), Gaps = 11/239 (4%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL QYRMHP I FPS FY RL D + L + ++ +L PY FFDV G ++
Sbjct: 1616 LLDTQYRMHPEISSFPSEQFYNSRLIDGPDMAKLRQQPWHASTILGPYRFFDV-AGTQTK 1674
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
+ S+ N+ E + LY L+ ++ K +GIIT YK QL ++ F +
Sbjct: 1675 QVHGHSFINIPELNAALQLYSRLKTDYTNVDF-KGKIGIITTYKAQLNEMKLRFAHTYGE 1733
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRA-SNHGVGFVADIRRMNVALTRARRALWVMGN 180
E +++ NT DAFQG+ER++II SCVRA + G+GF+ DIRRMNV LTRA+ +LWV+G+
Sbjct: 1734 EIFQEIEFNTTDAFQGREREIIIFSCVRAKATGGIGFLGDIRRMNVGLTRAKSSLWVLGD 1793
Query: 181 AGALTQSDDWAALIADSKARNCYMDMDSLPKEFSVALAAKAPGYG--PLQGKIPHNARG 237
+ +L Q W LI D+K+R+ Y D VAL +K G P P A G
Sbjct: 1794 SRSLKQGQFWNRLIEDAKSRDRYTTGD------IVALFSKPTARGGQPAMKAKPAPANG 1846
>gi|384495650|gb|EIE86141.1| hypothetical protein RO3G_10852 [Rhizopus delemar RA 99-880]
Length = 1687
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 89/200 (44%), Positives = 124/200 (62%), Gaps = 5/200 (2%)
Query: 4 SVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH-R 62
++QYRMHP I D PSR FYQ RL D + + V++ P PY F+DV G+E R
Sbjct: 1482 NIQYRMHPEISDLPSRLFYQSRLQDGSEMDKISSAVWHALPEFPPYCFYDVRDGQEKMGR 1541
Query: 63 GGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNSE 122
G S+ NV EA V L + L L +M +G+ITPYK Q+ L+ F+
Sbjct: 1542 GKSIF--NVAEADAAVSLVDLLLTKLPTMKFAS-KIGVITPYKQQVGQLKARFQKRFGDG 1598
Query: 123 EGKDLYINTVDAFQGQERDVIIMSCVRA-SNHGVGFVADIRRMNVALTRARRALWVMGNA 181
+ NTVD FQGQE+++II SCVRA S G+GF+AD+RRMNV LTRA+ +L+V+G+A
Sbjct: 1599 IVDAIDFNTVDGFQGQEKEIIIFSCVRAGSGRGIGFLADMRRMNVGLTRAKCSLYVLGHA 1658
Query: 182 GALTQSDDWAALIADSKARN 201
+L++S+ W L+ D+K R+
Sbjct: 1659 NSLSRSEYWGDLVQDAKKRS 1678
>gi|281202655|gb|EFA76857.1| putative splicing endonuclease [Polysphondylium pallidum PN500]
Length = 1423
Score = 164 bits (414), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 91/209 (43%), Positives = 129/209 (61%), Gaps = 12/209 (5%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
+L VQYRMHP I FPSRHFY L D +V N +E +YKDP P++F+D+ E
Sbjct: 1115 VLKVQYRMHPSISRFPSRHFYMNVLEDGPNVKNYTEE-FYKDPRFGPFIFYDIYDSNEES 1173
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
G S +NV EAK L +L+ + ++ K ++G+ITPYK Q+ HE + + S
Sbjct: 1174 GPGH-SLKNVTEAKLVALLITNLENSFPNI---KKSIGVITPYKQQV----HEIKRRI-S 1224
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVMGN 180
+D+ +++VD FQG+E+D+II SCVRA G +GF++D+RRMNV LTRAR +L V+GN
Sbjct: 1225 PVNQDIDVSSVDGFQGREKDIIIFSCVRAHRGGTIGFLSDVRRMNVGLTRARSSLIVIGN 1284
Query: 181 AGALTQSDDWAALIADS-KARNCYMDMDS 208
+ L + DW AL+ S N Y + S
Sbjct: 1285 SNLLKLNPDWEALVMHSINVLNGYFPISS 1313
>gi|336370055|gb|EGN98396.1| hypothetical protein SERLA73DRAFT_109860 [Serpula lacrymans var.
lacrymans S7.3]
gi|336382798|gb|EGO23948.1| hypothetical protein SERLADRAFT_450249 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1935
Score = 163 bits (413), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 89/209 (42%), Positives = 130/209 (62%), Gaps = 5/209 (2%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LLS+QYRMHP I PSR FYQGRL D + + ++ P Y FF+V G+E
Sbjct: 1586 LLSIQYRMHPDISQLPSRIFYQGRLLDGPDMDVKTKQPWHSHPKFGTYRFFNVSKGQEQE 1645
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
GG S +N E++ V +Y L K ++ VGI+T Y+ Q+ L+ F+ S
Sbjct: 1646 AGGH-SLKNNLESQVAVAMYSRLCKEFPAIDFD-FRVGIVTMYRGQVLELKRAFQRRFGS 1703
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASN--HGVGFVADIRRMNVALTRARRALWVMG 179
+ ++ +TVD FQGQE+DVII+SCVRA VGF+AD+RRMNVA+TRAR +L+++G
Sbjct: 1704 DIISKVHFHTVDGFQGQEKDVIILSCVRAGPGLQSVGFLADVRRMNVAITRARSSLFILG 1763
Query: 180 NAGALTQSDD-WAALIADSKARNCYMDMD 207
NA L +SD+ W +++ D+++R+ + D D
Sbjct: 1764 NAPTLERSDENWRSIVNDARSRSFFTDTD 1792
>gi|164429654|ref|XP_964658.2| hypothetical protein NCU02036 [Neurospora crassa OR74A]
gi|157073565|gb|EAA35422.2| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 682
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 89/203 (43%), Positives = 121/203 (59%), Gaps = 3/203 (1%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL QYRMHP I FP FY+G L D + + + +++ +L PY FFDV G +
Sbjct: 321 LLDTQYRMHPEISSFPRAAFYEGLLQDGDDMAKSRLQPWHRSTLLGPYRFFDV-RGSQER 379
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
+ S N +E K + LY + ++ L K +GIITPYK QL L+ +F
Sbjct: 380 GPKNQSLVNEEELKVAMQLYRRFKADYGNVDL-KGKIGIITPYKAQLYRLRSQFAQRFGD 438
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRALWVMGN 180
++ NT DAFQG+E ++II SCVRAS G+GF+ DIRRMNV LTRAR +LW++G+
Sbjct: 439 AITDEIEFNTTDAFQGRECEIIIFSCVRASPTGGIGFMTDIRRMNVGLTRARSSLWILGD 498
Query: 181 AGALTQSDDWAALIADSKARNCY 203
+ AL Q + WA LI DSK R+ Y
Sbjct: 499 SRALMQGEFWAKLIEDSKRRDRY 521
>gi|366997484|ref|XP_003678504.1| hypothetical protein NCAS_0J01870 [Naumovozyma castellii CBS 4309]
gi|342304376|emb|CCC72166.1| hypothetical protein NCAS_0J01870 [Naumovozyma castellii CBS 4309]
Length = 2314
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 78/203 (38%), Positives = 123/203 (60%), Gaps = 2/203 (0%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL VQYRMHP I FPS FY GRL D ++ + ++ PY FFD++ G++
Sbjct: 1619 LLDVQYRMHPEISKFPSAEFYNGRLKDGPNMEEVNMRPWHSTSPFSPYKFFDIVSGKQQQ 1678
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
++SY N++E + + L + L + ++ +G+I+PY+ Q++ ++ EF
Sbjct: 1679 NKKTMSYINMEEIQVALELVDSLFQQFENRIDFTGKIGVISPYREQMQRMRKEFLRYFGG 1738
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRA--SNHGVGFVADIRRMNVALTRARRALWVMG 179
+ + NT+D FQGQE+++II+SCVRA + VGF+ D RRMNVA TRA+ +LW++G
Sbjct: 1739 TIMQYVDFNTIDGFQGQEKEIIIISCVRADDTQSSVGFLKDFRRMNVAFTRAKASLWILG 1798
Query: 180 NAGALTQSDDWAALIADSKARNC 202
+ +L ++ W LI D+K RNC
Sbjct: 1799 HQQSLIKNKLWRDLIIDAKNRNC 1821
>gi|9954728|gb|AAG09081.1|AC026237_2 Similar to tRNA-splicing endonuclease positive effector SEN1
[Arabidopsis thaliana]
Length = 2142
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 85/212 (40%), Positives = 126/212 (59%), Gaps = 10/212 (4%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
++L+ QYRMHP I FPS HFY +L + ++ ++++ L PYVF+D++ G+E
Sbjct: 1592 LMLTQQYRMHPEICRFPSMHFYDNKLLNGVD-MSSKSAPFHENHHLGPYVFYDIVDGQEH 1650
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
G S S N EA+ V L +K S + +GIITPYK QL L+ F
Sbjct: 1651 RSGDSSSVCNEQEAEAAVQLLRFFKKRYPSEFVAG-RIGIITPYKRQLAVLRSRFTGAFG 1709
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG--------VGFVADIRRMNVALTRAR 172
++ D+ +NTVD FQG+E D++++S VRA++ +GFVAD+RRMNVALTRA+
Sbjct: 1710 AQVTADMEMNTVDGFQGKEVDILVLSTVRATHSAPDGVNQSRIGFVADVRRMNVALTRAK 1769
Query: 173 RALWVMGNAGALTQSDDWAALIADSKARNCYM 204
+LWV+GN L + +W AL+ D+K R +
Sbjct: 1770 LSLWVLGNTRTLQRDHNWGALVKDAKEREVII 1801
>gi|367021720|ref|XP_003660145.1| hypothetical protein MYCTH_2298080 [Myceliophthora thermophila ATCC
42464]
gi|347007412|gb|AEO54900.1| hypothetical protein MYCTH_2298080 [Myceliophthora thermophila ATCC
42464]
Length = 2059
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/203 (43%), Positives = 124/203 (61%), Gaps = 3/203 (1%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL +QYRMHP I FPS+ FY+G L D + L + +++ +L PY FFDV G +S
Sbjct: 1634 LLDMQYRMHPEISRFPSQEFYEGLLQDGADMGRLRLQPWHESELLGPYRFFDV-KGSQSR 1692
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
+ S N +E K + LY + + L K +GIITPYK QL L+ F
Sbjct: 1693 GPKNQSLVNEEELKVAMQLYRRFRTDYGKVEL-KGKIGIITPYKAQLLRLRQRFTEKYGE 1751
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRALWVMGN 180
+++ NT DAFQG+E ++II SCVRAS G+GF+ DIRRMNV LTRA+ +LW++G+
Sbjct: 1752 GITEEIEFNTTDAFQGRECEIIIFSCVRASPTGGIGFMTDIRRMNVGLTRAKSSLWILGD 1811
Query: 181 AGALTQSDDWAALIADSKARNCY 203
+ AL Q + W+ LI D+K R+ Y
Sbjct: 1812 SRALVQGEFWSKLIEDAKRRDRY 1834
>gi|125564230|gb|EAZ09610.1| hypothetical protein OsI_31894 [Oryza sativa Indica Group]
Length = 2181
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/220 (40%), Positives = 128/220 (58%), Gaps = 15/220 (6%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
++L+ QYRMHP I FPS HFY+ +L D + + D L PY+FFDV GRE
Sbjct: 1619 IMLTKQYRMHPEISRFPSLHFYENKLLDGAQAADKSAPFHGHD-CLGPYMFFDVADGREQ 1677
Query: 61 --HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV 118
+ S N EA+ + + L+ S + +GIITPY+ QL L+ F +
Sbjct: 1678 CGKNAATQSLCNQFEAEAALEILGFLKNRYPS-EFSCMKIGIITPYRSQLSLLRSRFNSF 1736
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASN-----------HGVGFVADIRRMNVA 167
E ++ INTVD FQG+E D++++S VRASN G+GFVAD+RRMNVA
Sbjct: 1737 FGPEIVAEMEINTVDGFQGREVDILVLSTVRASNSSDSRHHTGEARGIGFVADVRRMNVA 1796
Query: 168 LTRARRALWVMGNAGALTQSDDWAALIADSKARNCYMDMD 207
LTRAR +LW++GNA L + WA+L+ ++K RN ++ ++
Sbjct: 1797 LTRARFSLWIVGNAKTLQTNSHWASLLQNAKERNLFISVN 1836
>gi|189198704|ref|XP_001935689.1| DNA-binding protein SMUBP-2 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187982788|gb|EDU48276.1| DNA-binding protein SMUBP-2 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 1954
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/233 (38%), Positives = 133/233 (57%), Gaps = 7/233 (3%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL VQYRMHP I FPS+ FY G+L D + ++ + +++ +L PY FFDV G++
Sbjct: 1581 LLDVQYRMHPEISQFPSQTFYDGKLLDGGDMASVRKQPWHQSSLLGPYRFFDV-KGQQQK 1639
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
S N+ E + LY L + K +GIITPYK QL ++ F+
Sbjct: 1640 ATSGKSLMNIAEINVALQLYHRLTSDFPNYNF-KGKIGIITPYKSQLYEIKERFKRTYGQ 1698
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGNA 181
+D+ NT DAFQG+E ++II SCVRA N G+GF+ D+RRMNV LTRA+ +LWV+G++
Sbjct: 1699 TIVEDIDFNTTDAFQGRENEIIIFSCVRA-NGGIGFLDDVRRMNVGLTRAKSSLWVLGDS 1757
Query: 182 GALTQSDDWAALIADSKARNCYMD--MDSLPKEFSVALAAKAPGYGPLQGKIP 232
+L + W LI +++ R + D + + ++ S A GY +QG P
Sbjct: 1758 TSLQSGEYWRKLILNAQERKRFTDGQVSRMLEQHSSNFPAPKEGY--MQGNRP 1808
>gi|328862576|gb|EGG11677.1| hypothetical protein MELLADRAFT_33290 [Melampsora larici-populina
98AG31]
Length = 349
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/209 (42%), Positives = 125/209 (59%), Gaps = 6/209 (2%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYY-KDPVLRPYVFFDVIHGRES 60
LLS+QYRMHP I FPS+ FY RL D + + + ++ +D PY F+ I RE
Sbjct: 127 LLSIQYRMHPAISAFPSKAFYDSRLMDGPDMASRTTQRWHTEDTFFPPYTFYHPIGARE- 185
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
RG S+ N EA V +Y L +T + VGIIT Y Q+ ++ +FR
Sbjct: 186 ERGRHHSFINRTEAGMTVAIYSRLTRTFPDIDFA-YRVGIITAYAGQVGEIRRQFRQSFP 244
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRA---SNHGVGFVADIRRMNVALTRARRALWV 177
++ L INTVD FQGQE+D+II+SCVR ++G+GF+ D RRMNVALTRA+ +L+V
Sbjct: 245 ADVVSTLDINTVDGFQGQEKDIIILSCVRGGKDDDNGIGFLKDTRRMNVALTRAKSSLFV 304
Query: 178 MGNAGALTQSDDWAALIADSKARNCYMDM 206
+GN AL Q +W ALI D++ R + ++
Sbjct: 305 IGNQSALVQDKNWKALIDDARERGTFSEV 333
>gi|334182633|ref|NP_173124.2| hydrolase domain-containing protein [Arabidopsis thaliana]
gi|332191377|gb|AEE29498.1| hydrolase domain-containing protein [Arabidopsis thaliana]
Length = 2127
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/212 (40%), Positives = 126/212 (59%), Gaps = 10/212 (4%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
++L+ QYRMHP I FPS HFY +L + ++ ++++ L PYVF+D++ G+E
Sbjct: 1686 LMLTQQYRMHPEICRFPSMHFYDNKLLNGVD-MSSKSAPFHENHHLGPYVFYDIVDGQEH 1744
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
G S S N EA+ V L +K S + +GIITPYK QL L+ F
Sbjct: 1745 RSGDSSSVCNEQEAEAAVQLLRFFKKRYPSEFVAG-RIGIITPYKRQLAVLRSRFTGAFG 1803
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG--------VGFVADIRRMNVALTRAR 172
++ D+ +NTVD FQG+E D++++S VRA++ +GFVAD+RRMNVALTRA+
Sbjct: 1804 AQVTADMEMNTVDGFQGKEVDILVLSTVRATHSAPDGVNQSRIGFVADVRRMNVALTRAK 1863
Query: 173 RALWVMGNAGALTQSDDWAALIADSKARNCYM 204
+LWV+GN L + +W AL+ D+K R +
Sbjct: 1864 LSLWVLGNTRTLQRDHNWGALVKDAKEREVII 1895
>gi|409042014|gb|EKM51498.1| hypothetical protein PHACADRAFT_199007 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1989
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/209 (41%), Positives = 126/209 (60%), Gaps = 6/209 (2%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LLS+QYRMHP I PSR FY GRL D + + +++ P PY F++V G E+
Sbjct: 1618 LLSIQYRMHPDISLLPSRLFYNGRLLDGPDMASKTQRPWHRHPKFGPYRFYNVHRGVET- 1676
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
S SY N EA+ V LY L++ + +GI+T YK Q+ L+ F +
Sbjct: 1677 -TASHSYLNQAEAEIAVALYNRLRQEFSAHDFD-FKIGIVTMYKAQMLELRRAFERRFGT 1734
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASN--HGVGFVADIRRMNVALTRARRALWVMG 179
+ NTVD FQGQE+++I++SCVRA VGF+ D+RRMNVALTRA+ +++++G
Sbjct: 1735 NIHGLVDFNTVDGFQGQEKEIIVLSCVRAGPGVERVGFLRDVRRMNVALTRAKSSIFILG 1794
Query: 180 NAGALTQSD-DWAALIADSKARNCYMDMD 207
NA L +SD DW ++ D++ R+C +D+D
Sbjct: 1795 NAATLERSDEDWRTIVKDARERSCLVDVD 1823
>gi|299743534|ref|XP_001835836.2| helicase sen1 [Coprinopsis cinerea okayama7#130]
gi|298405699|gb|EAU85901.2| helicase sen1 [Coprinopsis cinerea okayama7#130]
Length = 1960
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/281 (35%), Positives = 147/281 (52%), Gaps = 16/281 (5%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LLS+QYRMHP I FPS+ FY R+ D ++ L ++ +P+L Y F+V E
Sbjct: 1595 LLSIQYRMHPEISRFPSKAFYNDRIQDGPNMKELTARPWHAEPLLGIYKIFNVNGNAE-- 1652
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
G S +N E + LY L + GL + +GI++PY+ Q+K L+ F
Sbjct: 1653 EGPQNSLKNRAEVEVATALYRRLSTQFREFGLER-KIGIVSPYRAQIKELERSFFQAFGQ 1711
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASN--HGVGFVADIRRMNVALTRARRALWVMG 179
++ NTVD FQGQE+D+II+SCVR +GF+AD+RR+NVA+TRA+ AL+++G
Sbjct: 1712 SVLDEIDFNTVDGFQGQEKDIIILSCVRGGPGVKSIGFMADVRRLNVAITRAKSALFILG 1771
Query: 180 NAGALTQSDD-WAALIADSKARNCYMDMDSLPKEFSVALA-AKAPGYGPLQGKIPHNARG 237
N L +S+ W IAD++ RN +++DS K F+ A P L K P +
Sbjct: 1772 NVPTLERSESIWKQAIADARERNLIVNVDS--KTFTQPSAMTSVPVMKAL--KTPSRKKP 1827
Query: 238 LRSAGQRHRSFDMNMESRSGTPSEDDEKVSRNGNYRPFKPP 278
S S N+ + TP K +N + F PP
Sbjct: 1828 RLSGPDNLPSQSQNLPAGLATP-----KALKNSMKKGFNPP 1863
>gi|16945408|emb|CAC10094.2| related to SEN1 protein [Neurospora crassa]
Length = 2126
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/203 (43%), Positives = 121/203 (59%), Gaps = 3/203 (1%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL QYRMHP I FP FY+G L D + + + +++ +L PY FFDV G +
Sbjct: 1629 LLDTQYRMHPEISSFPRAAFYEGLLQDGDDMAKSRLQPWHRSTLLGPYRFFDV-RGSQER 1687
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
+ S N +E K + LY + ++ L K +GIITPYK QL L+ +F
Sbjct: 1688 GPKNQSLVNEEELKVAMQLYRRFKADYGNVDL-KGKIGIITPYKAQLYRLRSQFAQRFGD 1746
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRALWVMGN 180
++ NT DAFQG+E ++II SCVRAS G+GF+ DIRRMNV LTRAR +LW++G+
Sbjct: 1747 AITDEIEFNTTDAFQGRECEIIIFSCVRASPTGGIGFMTDIRRMNVGLTRARSSLWILGD 1806
Query: 181 AGALTQSDDWAALIADSKARNCY 203
+ AL Q + WA LI DSK R+ Y
Sbjct: 1807 SRALMQGEFWAKLIEDSKRRDRY 1829
>gi|452989270|gb|EME89025.1| hypothetical protein MYCFIDRAFT_55523 [Pseudocercospora fijiensis
CIRAD86]
Length = 1999
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/207 (43%), Positives = 119/207 (57%), Gaps = 3/207 (1%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL QYRMHP I FPSR FY G L D S+ L + ++K +L PY FFDV ES
Sbjct: 1601 LLDTQYRMHPDISLFPSRSFYDGLLKDGPSMAKLRAQPWHKSALLAPYRFFDVAGQHESA 1660
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
G S N E LY+ L+ +GIITPYK QL+ L++ F +
Sbjct: 1661 PKGH-SLVNRAEIAIAELLYDRLRADFPDYDFTS-KIGIITPYKSQLRELKNRFASKYGQ 1718
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVMGN 180
+ + NT DAFQG+E ++II SCVRAS G +GF+ DIRRMNV LTRA+ +LWV+GN
Sbjct: 1719 QIFDFIEFNTTDAFQGRESEIIIFSCVRASPAGGIGFLQDIRRMNVGLTRAKSSLWVLGN 1778
Query: 181 AGALTQSDDWAALIADSKARNCYMDMD 207
+ +L + W L+ D++ R+C D
Sbjct: 1779 SESLMRGQYWKRLVEDARERDCLTSGD 1805
>gi|336463474|gb|EGO51714.1| hypothetical protein NEUTE1DRAFT_70677 [Neurospora tetrasperma FGSC
2508]
Length = 2064
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/203 (43%), Positives = 121/203 (59%), Gaps = 3/203 (1%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL QYRMHP I FP FY+G L D + + + +++ +L PY FFDV G +
Sbjct: 1629 LLDTQYRMHPEISSFPRAAFYEGLLQDGDDMAKSRLQPWHRSTLLGPYRFFDV-RGSQER 1687
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
+ S N +E K + LY + ++ L K +GIITPYK QL L+ +F
Sbjct: 1688 GPKNQSLVNEEELKVAMQLYRRFKADYGNVDL-KGKIGIITPYKAQLYRLRSQFAQRFGD 1746
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRALWVMGN 180
++ NT DAFQG+E ++II SCVRAS G+GF+ DIRRMNV LTRAR +LW++G+
Sbjct: 1747 TITDEIEFNTTDAFQGRECEIIIFSCVRASPTGGIGFMTDIRRMNVGLTRARSSLWILGD 1806
Query: 181 AGALTQSDDWAALIADSKARNCY 203
+ AL Q + WA LI DSK R+ Y
Sbjct: 1807 SRALMQGEFWAKLIEDSKRRDRY 1829
>gi|350297309|gb|EGZ78286.1| hypothetical protein NEUTE2DRAFT_102083 [Neurospora tetrasperma FGSC
2509]
Length = 2078
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 89/203 (43%), Positives = 121/203 (59%), Gaps = 3/203 (1%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL QYRMHP I FP FY+G L D + + + +++ +L PY FFDV G +
Sbjct: 1629 LLDTQYRMHPEISSFPRAAFYEGLLQDGDDMAKSRLQPWHRSTLLGPYRFFDV-RGSQER 1687
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
+ S N +E K + LY + ++ L K +GIITPYK QL L+ +F
Sbjct: 1688 GPKNQSLVNEEELKVAMQLYRRFKADYGNVDL-KGKIGIITPYKAQLYRLRSQFAQRFGD 1746
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRALWVMGN 180
++ NT DAFQG+E ++II SCVRAS G+GF+ DIRRMNV LTRAR +LW++G+
Sbjct: 1747 TITDEIEFNTTDAFQGRECEIIIFSCVRASPTGGIGFMTDIRRMNVGLTRARSSLWILGD 1806
Query: 181 AGALTQSDDWAALIADSKARNCY 203
+ AL Q + WA LI DSK R+ Y
Sbjct: 1807 SRALMQGEFWAKLIEDSKRRDRY 1829
>gi|171684931|ref|XP_001907407.1| hypothetical protein [Podospora anserina S mat+]
gi|170942426|emb|CAP68078.1| unnamed protein product [Podospora anserina S mat+]
Length = 2074
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 87/203 (42%), Positives = 124/203 (61%), Gaps = 3/203 (1%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL +QYRMHP I FPS+ FY+G L D + L + +++ L PY FFDV G +S
Sbjct: 1658 LLDMQYRMHPEISRFPSKEFYEGLLQDGADMAGLRLQPWHQSVYLGPYRFFDV-KGSQSR 1716
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
+ S N +E K + LY+ + ++ + +GIITPYK QL L+ F +
Sbjct: 1717 GPKNQSLVNEEELKVAMKLYQRFRSDYSNVD-ARGKIGIITPYKAQLHRLRQRFTDKYGE 1775
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRALWVMGN 180
+++ NT DAFQG+E ++II SCVRAS G+GF+ DIRRMNV LTRA+ +LW++G+
Sbjct: 1776 GITEEIEFNTTDAFQGRECEIIIFSCVRASPTGGIGFMTDIRRMNVGLTRAKSSLWILGD 1835
Query: 181 AGALTQSDDWAALIADSKARNCY 203
+ AL Q + W LI D+K R+ Y
Sbjct: 1836 SRALQQGEYWNKLIEDAKERDRY 1858
>gi|210075156|ref|XP_002142993.1| YALI0A19404p [Yarrowia lipolytica]
gi|199424904|emb|CAG84178.4| YALI0A19404p [Yarrowia lipolytica CLIB122]
Length = 1930
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 97/261 (37%), Positives = 140/261 (53%), Gaps = 12/261 (4%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
+L QYRMHP I FP FY+G L D + + +++ L PY FFDV +E+
Sbjct: 1533 MLDTQYRMHPDISVFPREQFYRGILKDGAGMAEKTKKPWHEYKQLAPYAFFDVAGNQEAT 1592
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
R S + N E LY L S GK+ +GII+PYK Q+ L+ F
Sbjct: 1593 RNHS--FFNDAEVHLADQLYR-----LMSNMYGKIDIGIISPYKQQVLRLKRHFTREYGG 1645
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRAS--NHGVGFVADIRRMNVALTRARRALWVMG 179
+ + N+VD FQGQE+D+IIMSCVRAS + VGF+AD RRMNVA TRAR ++W++G
Sbjct: 1646 DILDKIEFNSVDGFQGQEKDIIIMSCVRASPDSDSVGFLADKRRMNVAFTRARSSMWILG 1705
Query: 180 NAGALTQSDDWAALIADSKARNCYMDMD-SLPKEFSVALAAKAPGYGPLQGKIPHNARGL 238
NA L+++ W ++ D++ R+ MD + L K+ + + P G P G
Sbjct: 1706 NADTLSRNTIWRKVVNDARNRDMLMDGNRPLRKQDLIVAGSTGPSSG--SAAPPETPTGP 1763
Query: 239 RSAGQRHRSFDMNMESRSGTP 259
+AGQ+ +S + + R P
Sbjct: 1764 AAAGQKRKSDSNSYQGREKRP 1784
>gi|301105483|ref|XP_002901825.1| ATP-dependent helicase, putative [Phytophthora infestans T30-4]
gi|262099163|gb|EEY57215.1| ATP-dependent helicase, putative [Phytophthora infestans T30-4]
Length = 2378
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 90/215 (41%), Positives = 129/215 (60%), Gaps = 9/215 (4%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEV---YYKDPVLRPYVFFDVIHGR 58
+L VQYRMHP +RDFPSR FY G LTD SV+ +V Y +P++ +DV + R
Sbjct: 1866 MLRVQYRMHPFLRDFPSRRFYGGMLTDGPSVMERVQKVCPGVYARTSFQPFLLYDVENSR 1925
Query: 59 ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV 118
E GS Y V EA F V L +++ + + K +VG ++PYK Q++ L+ E
Sbjct: 1926 EEDMNGS-KYNRV-EAAFCVSLCQNMFECCADVRNNKWSVGFVSPYKEQVRVLRQEITRS 1983
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWV 177
+ +NTVD FQG+E+DVI+ SCVR+S G +GF+ DIRR+NVA+TRAR L+V
Sbjct: 1984 -GIPASVSIEVNTVDGFQGREKDVIVFSCVRSSKRGGIGFLRDIRRLNVAITRARFCLYV 2042
Query: 178 MGNAGALTQSDDWAALIADSKARNCYM--DMDSLP 210
+GN L + + WAAL+ ++ R + + DS P
Sbjct: 2043 VGNVNTLVRDETWAALVKSARDRRLIIRSEGDSFP 2077
>gi|357488337|ref|XP_003614456.1| Helicase sen1 [Medicago truncatula]
gi|355515791|gb|AES97414.1| Helicase sen1 [Medicago truncatula]
Length = 853
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 84/204 (41%), Positives = 117/204 (57%), Gaps = 2/204 (0%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
+L QYRMHP IR FPS FY L D E V + +++ P+ FFD+ G+E+
Sbjct: 547 MLKTQYRMHPEIRSFPSMEFYNNSLEDGEGVKIQTERDWHRYRCFGPFSFFDIHEGKEAR 606
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
GS S+ NV+E F + LY+ L ++ G V II+PYK Q+ Q F
Sbjct: 607 PSGSGSWVNVEEVDFVLLLYQKLVSLYPTLKSGN-QVAIISPYKAQVNLFQQRFEETFGV 665
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVMGN 180
K + I TVD QG+E+DV I SCVRAS G+GF+ DIRRMNV +TRA+ A+ V+G+
Sbjct: 666 SAEKLVDICTVDGCQGREKDVAIFSCVRASKEGGIGFLDDIRRMNVGITRAKSAVLVVGS 725
Query: 181 AGALTQSDDWAALIADSKARNCYM 204
A L +S W L+ ++ R+C+
Sbjct: 726 ASTLRRSVQWNKLVESAEKRDCFF 749
>gi|255556880|ref|XP_002519473.1| conserved hypothetical protein [Ricinus communis]
gi|223541336|gb|EEF42887.1| conserved hypothetical protein [Ricinus communis]
Length = 826
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 83/207 (40%), Positives = 121/207 (58%), Gaps = 2/207 (0%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
+L +QYRMHP IRDFPS+ FY L D+E + +++ P+ FFD+ G+ES
Sbjct: 554 MLKMQYRMHPQIRDFPSKEFYSEELQDAEKMDEKTKRDWHEYRCFGPFCFFDIHEGKESQ 613
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
GS S+ N DE F + +Y L T+ II+PY+ Q+K LQ FR++
Sbjct: 614 PSGSGSWVNNDEVDFVLHMYHKLV-TMHPKLRSSSQFAIISPYRNQVKLLQDRFRDMFGQ 672
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRALWVMGN 180
E + + I TVD FQG+E+DV I SCVRA+ + G+GFV+D RRMNV +TRA+ + V+G+
Sbjct: 673 ESEQFVDIQTVDGFQGREKDVAIFSCVRANKDRGIGFVSDSRRMNVGITRAKSTVLVVGS 732
Query: 181 AGALTQSDDWAALIADSKARNCYMDMD 207
A L + W L+ ++ R +D
Sbjct: 733 ASTLKSDESWKRLVESAEQRGVLFKVD 759
>gi|429853279|gb|ELA28360.1| helicase sen1 [Colletotrichum gloeosporioides Nara gc5]
Length = 2051
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 86/209 (41%), Positives = 123/209 (58%), Gaps = 2/209 (0%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
+L QYRMHP I FPS FY+G+L D + + +L + ++ +L PY FFDV +E
Sbjct: 1642 MLDRQYRMHPEISRFPSLEFYEGKLVDGDDMADLRRQPWHASALLGPYRFFDVEGSQEKG 1701
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
G S N E + + LYE + + +GIITPYK QL+ L+++F
Sbjct: 1702 NKGR-SLVNHAELRVAMQLYERFRADFGRQTDIRGKIGIITPYKAQLQELRYQFGRQYGD 1760
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRALWVMGN 180
D+ NT DAFQG+E ++II SCVRAS G+GF+ DIRRMNV LTRA+ +LW++G+
Sbjct: 1761 GITDDIEFNTTDAFQGRECEIIIFSCVRASPTGGIGFMQDIRRMNVGLTRAKSSLWILGD 1820
Query: 181 AGALTQSDDWAALIADSKARNCYMDMDSL 209
+ AL Q + W LI +++ R Y D +
Sbjct: 1821 SRALVQGEFWNKLIENARQRALYTKGDIM 1849
>gi|449549000|gb|EMD39966.1| hypothetical protein CERSUDRAFT_150792 [Ceriporiopsis subvermispora
B]
Length = 1925
Score = 160 bits (405), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 95/225 (42%), Positives = 129/225 (57%), Gaps = 7/225 (3%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRE-S 60
LLS+QYRMHP I PS+ FY RL D + ++ P Y FF+V GRE +
Sbjct: 1592 LLSIQYRMHPDISRLPSQLFYNKRLQDGPDMAVKTRRPWHSHPKFGTYRFFNVGEGREEA 1651
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
GG S N EA+ V LY L++ K+ VGII+ Y+ Q+ L+ F
Sbjct: 1652 GHGGGHSLVNRSEAQVAVALYNRLRQEFKAFDFD-FKVGIISMYRGQIWELRRVFEQRFG 1710
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASN--HGVGFVADIRRMNVALTRARRALWVM 178
S+ + NTVD FQGQE+DVII+SCVRA VGF+ DIRRMNVALTRA+ +L+V+
Sbjct: 1711 SDITGTIDFNTVDGFQGQEKDVIILSCVRAGPGVTSVGFLRDIRRMNVALTRAKSSLFVL 1770
Query: 179 GNAGALTQSDD-WAALIADSKARNCYMDMDSLPKEFSVALAAKAP 222
G+A L +SDD W ++ D++ R+C D D+ F+ + A P
Sbjct: 1771 GHASTLERSDDVWRDIVVDARTRSCLADTDT--AYFTAPITAIKP 1813
>gi|302801241|ref|XP_002982377.1| hypothetical protein SELMODRAFT_421714 [Selaginella moellendorffii]
gi|300149969|gb|EFJ16622.1| hypothetical protein SELMODRAFT_421714 [Selaginella moellendorffii]
Length = 1811
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/206 (45%), Positives = 133/206 (64%), Gaps = 16/206 (7%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLRPYVFFDVIHGRES 60
+L+ QYRMHP IR FPS H+Y G+L D +V++ ++++ PY FFD+ G+E
Sbjct: 805 MLTTQYRMHPEIRSFPSTHYYGGQLKDGSTVLHGNRSATFHRERCFEPYRFFDIRDGQE- 863
Query: 61 HRGGSV-SYQNVDEAKFGVCLYEHLQKTL-KSMGLGKVTVGIITPYKLQLKCLQHEFRNV 118
R GS+ S N DEA+F L L++ + + G++ G+ITPY+ Q K LQ R++
Sbjct: 864 -RPGSMQSLTNPDEAEFIFQLLRVLKERYPEEVRPGRI--GVITPYQEQRKVLQENMRSL 920
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRAS----NHGVGFVADIRRMNVALTRARRA 174
G D +NTVD+FQG+E D+I++S VRAS GVGF+AD+RRMNVALTRA+ +
Sbjct: 921 ---HSGID--VNTVDSFQGREADIIVLSTVRASFGDSQAGVGFLADVRRMNVALTRAKFS 975
Query: 175 LWVMGNAGALTQSDDWAALIADSKAR 200
LWV+GNA L ++ DW AL+ D + R
Sbjct: 976 LWVVGNARTLERNPDWKALLQDCRRR 1001
>gi|297850080|ref|XP_002892921.1| hypothetical protein ARALYDRAFT_312653 [Arabidopsis lyrata subsp.
lyrata]
gi|297338763|gb|EFH69180.1| hypothetical protein ARALYDRAFT_312653 [Arabidopsis lyrata subsp.
lyrata]
Length = 2129
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/212 (40%), Positives = 125/212 (58%), Gaps = 10/212 (4%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
++L+ QYRMHP I FPS HFY +L + ++ +++ L PYVF+D++ G+E
Sbjct: 1591 LMLTQQYRMHPEICRFPSMHFYDYKLLNGVD-MSSKSAPFHESHHLGPYVFYDIVDGQEH 1649
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
G S S N EA+ V L +K S + +GIITPYK QL L+ F
Sbjct: 1650 RSGDSSSVCNEQEAEAAVQLLRFFKKRYPSEFVAG-RIGIITPYKRQLAVLRSRFTGAFG 1708
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG--------VGFVADIRRMNVALTRAR 172
++ D+ +NTVD FQG+E D++++S VRA++ +GFVAD+RRMNVALTRA+
Sbjct: 1709 AQVTADMEMNTVDGFQGREVDILVLSTVRATHSDPDGVNQSRIGFVADVRRMNVALTRAK 1768
Query: 173 RALWVMGNAGALTQSDDWAALIADSKARNCYM 204
+LWV+GN L + +W AL+ D+K R +
Sbjct: 1769 LSLWVLGNTRTLQRDHNWGALVKDAKEREVII 1800
>gi|169609334|ref|XP_001798086.1| hypothetical protein SNOG_07756 [Phaeosphaeria nodorum SN15]
gi|160701819|gb|EAT85222.2| hypothetical protein SNOG_07756 [Phaeosphaeria nodorum SN15]
Length = 1955
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 90/227 (39%), Positives = 132/227 (58%), Gaps = 7/227 (3%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL QYRMHP I FPSR FY G+L D + + + +++ + PY FFDV G++S
Sbjct: 1578 LLDTQYRMHPEISLFPSREFYDGKLMDGGDMATIRKQPWHQSMLFGPYRFFDVA-GQQSA 1636
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGL-GKVTVGIITPYKLQLKCLQHEFRNVLN 120
S N E + + LY L GK+ GIITPYK QL L+ F +V
Sbjct: 1637 APKGHSLINRAEIEVAMKLYHRLTSDFPDYNFRGKI--GIITPYKSQLTELKTRFASVYG 1694
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVMG 179
++ +D+ NT DAFQG+E ++II SCVRAS+ G+GF+ DIRRMNV LTRA+ ++WV+G
Sbjct: 1695 AQIIEDIEFNTADAFQGRESEIIIFSCVRASDRGGLGFLEDIRRMNVGLTRAKSSMWVLG 1754
Query: 180 NAGALTQSDDWAALIADSKARNCYM--DMDSLPKEFSVALAAKAPGY 224
+A +L++ + W L+ D++ R + ++ + + S A GY
Sbjct: 1755 HAPSLSRGEFWRGLVEDAQERKRFTTGNLTQMLNQHSSKFPAPKEGY 1801
>gi|407920626|gb|EKG13814.1| hypothetical protein MPH_09028 [Macrophomina phaseolina MS6]
Length = 1990
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/234 (40%), Positives = 130/234 (55%), Gaps = 5/234 (2%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL QYRMHP I FPS+ FY GRL D + L ++ ++ +L PY FFDV +S
Sbjct: 1599 LLDTQYRMHPEISYFPSQTFYDGRLLDGADMAALREKPWHSSTLLAPYRFFDVQGQHQSA 1658
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
G S N+ E + LY L K + +GIITPYK QL+ L+ F
Sbjct: 1659 PKGH-SLINIAEIDVAMALYSRLMNDFKDSVDLRGKIGIITPYKSQLRELKDRFARQYGD 1717
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVMGN 180
+ + NT DA+QG+E ++II SCVRAS G+GF+ DIRRMNV LTRA+ +LWV+GN
Sbjct: 1718 TVFEYVEFNTTDAYQGRESEIIIFSCVRASPAGGIGFLQDIRRMNVGLTRAKSSLWVLGN 1777
Query: 181 AGALTQSDDWAALIADSKARNCYM--DMDSLPKEFSVALAAKAPGY-GPLQGKI 231
+ +L + W L+ D++ R Y D+ + ++ S A A Y GP+ I
Sbjct: 1778 SQSLMRGQFWKLLVEDAQKRERYTTGDVRGMLRKHSSAFPAPKGAYSGPVVNGI 1831
>gi|190346052|gb|EDK38051.2| hypothetical protein PGUG_02149 [Meyerozyma guilliermondii ATCC 6260]
Length = 1359
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/271 (36%), Positives = 144/271 (53%), Gaps = 29/271 (10%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL VQYRMHP I FPS FY+ RL D ++ ++ + PY FFD++ G+
Sbjct: 988 LLDVQYRMHPDISRFPSAEFYRSRLHDGAGMLEKNTRPWHSEVPFSPYRFFDIV-GKHQQ 1046
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
S S N EA+ + + +HL L + +G+I+PYK Q++ L+ F
Sbjct: 1047 HESSRSLYNRAEAQVVLEMVDHLMYMLPPKEF-RGRIGVISPYKEQIRTLKDIFAKKYGR 1105
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVMGN 180
+ ++ NTVD +QGQE+++IIMSCVRAS G VGF++D+RRMNVALTRAR LW++GN
Sbjct: 1106 QIWNEVDFNTVDGYQGQEKEIIIMSCVRASETGNVGFLSDVRRMNVALTRARTTLWILGN 1165
Query: 181 AGALTQSDDWAALIADSKARNCYMDMDSLPKEFSVALAAKA-PGYGPLQGKIPHNARGLR 239
+L ++ W+ L+ D+ R L +KA PG+ + H G++
Sbjct: 1166 QKSLMRNKVWSRLLQDASDR---------------GLVSKAQPGF------LKHGVNGIK 1204
Query: 240 SAGQRHRS----FDMNMESRSGTPSEDDEKV 266
A ++H S N S S SE +V
Sbjct: 1205 KAQRQHTSKTNTLSSNDRSESDVISEPSSQV 1235
>gi|146421053|ref|XP_001486478.1| hypothetical protein PGUG_02149 [Meyerozyma guilliermondii ATCC 6260]
Length = 1359
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/248 (37%), Positives = 137/248 (55%), Gaps = 25/248 (10%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL VQYRMHP I FPS FY+ RL D ++ ++ + PY FFD++ G+
Sbjct: 988 LLDVQYRMHPDISRFPSAEFYRSRLHDGAGMLEKNTRPWHSEVPFSPYRFFDIV-GKHQQ 1046
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
S S N EA+ + + +HL L + +G+I+PYK Q++ L+ F
Sbjct: 1047 HESSRSLYNRAEAQVVLEMVDHLMYMLPPKEF-RGRIGVISPYKEQIRTLKDIFAKKYGR 1105
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVMGN 180
+ ++ NTVD +QGQE+++IIMSCVRAS G VGF++D+RRMNVALTRAR LW++GN
Sbjct: 1106 QIWNEVDFNTVDGYQGQEKEIIIMSCVRASETGNVGFLSDVRRMNVALTRARTTLWILGN 1165
Query: 181 AGALTQSDDWAALIADSKARNCYMDMDSLPKEFSVALAAKA-PGYGPLQGKIPHNARGLR 239
+L ++ W+ L+ D+ R L +KA PG+ + H G++
Sbjct: 1166 QKSLMRNKVWSRLLQDASDR---------------GLVSKAQPGF------LKHGVNGIK 1204
Query: 240 SAGQRHRS 247
A ++H S
Sbjct: 1205 KAQRQHTS 1212
>gi|414886089|tpg|DAA62103.1| TPA: hypothetical protein ZEAMMB73_701312 [Zea mays]
Length = 688
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 87/220 (39%), Positives = 128/220 (58%), Gaps = 17/220 (7%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
++L+ QYRMHP I FPS HFY+ +L D V + ++ + L PY+FFD+ GRE
Sbjct: 131 IMLTKQYRMHPEISRFPSLHFYENKLLDGVEVADKSASFHFHE-CLGPYMFFDIADGRE- 188
Query: 61 HRGGSVSYQ---NVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRN 117
H G + + Q N EA + + L + +GIITPY+ QL L+ +F +
Sbjct: 189 HCGRNAATQSLCNDFEADAALEILSFLNNRY-PLEFTSRKIGIITPYRSQLSILRSKFTS 247
Query: 118 VLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASN-----------HGVGFVADIRRMNV 166
E ++ INTVD FQG+E D++++S VRASN +GFVAD+RRMNV
Sbjct: 248 SFGPEIVAEMEINTVDGFQGREVDILLLSTVRASNSSDDSHRTGEARSIGFVADVRRMNV 307
Query: 167 ALTRARRALWVMGNAGALTQSDDWAALIADSKARNCYMDM 206
ALTRAR +LW++GNA L + W +L+ D++ RN ++ +
Sbjct: 308 ALTRARLSLWIVGNARTLRINSHWNSLVCDAEERNLFVSI 347
>gi|222641848|gb|EEE69980.1| hypothetical protein OsJ_29879 [Oryza sativa Japonica Group]
Length = 2215
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 88/220 (40%), Positives = 126/220 (57%), Gaps = 15/220 (6%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
++L+ QYRMHP I FPS HFY+ +L D + + D L PY+FFDV GRE
Sbjct: 1690 IMLTKQYRMHPEISRFPSLHFYENKLLDGAQAADKSAPFHGHD-CLGPYMFFDVADGREQ 1748
Query: 61 --HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV 118
+ S N EA+ + + L+ S +GIITPY+ QL L+ F +
Sbjct: 1749 CGKNAATQSLCNQFEAEAALEILGFLKNRYPS-EFSCRKIGIITPYRSQLSLLRSRFNSF 1807
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASN-----------HGVGFVADIRRMNVA 167
E ++ INTVD FQG+E D++++S VRASN +GFVAD+RRMNVA
Sbjct: 1808 FGPEIVAEMEINTVDGFQGREVDILVLSTVRASNSSDSRHHTGEARSIGFVADVRRMNVA 1867
Query: 168 LTRARRALWVMGNAGALTQSDDWAALIADSKARNCYMDMD 207
LTRAR +LW++GNA L + WA+L+ ++K RN ++ ++
Sbjct: 1868 LTRARFSLWIVGNAKTLQTNSHWASLLQNAKERNLFISVN 1907
>gi|396463537|ref|XP_003836379.1| similar to tRNA-splicing endonuclease [Leptosphaeria maculans JN3]
gi|312212932|emb|CBX93014.1| similar to tRNA-splicing endonuclease [Leptosphaeria maculans JN3]
Length = 1964
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 93/226 (41%), Positives = 128/226 (56%), Gaps = 5/226 (2%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL QYRMHP I FPS+ FY G+L D + L + +++ +L PY FFDV +E+
Sbjct: 1585 LLDTQYRMHPEISLFPSQTFYDGKLLDGGDMAGLRKKPWHQSMLLGPYRFFDVQGQQEAA 1644
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
G S N+ E + LY L K VGIITPYK QL+ L+ F
Sbjct: 1645 PKGH-SLINMKEIDIAIQLYTRLISDYPDYDF-KGKVGIITPYKSQLRELKARFMARFGE 1702
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVMGN 180
+ + + NT DAFQG+E ++II SCVRAS G +GF+ DIRRMNV LTRA+ +LWV+GN
Sbjct: 1703 KTDEMIDFNTTDAFQGRESEIIIFSCVRASPAGGIGFLQDIRRMNVGLTRAKSSLWVLGN 1762
Query: 181 AGALTQSDDWAALIADSKARNCYM--DMDSLPKEFSVALAAKAPGY 224
+ +L + + W L+ D+K R+ Y D+ + + S A GY
Sbjct: 1763 SQSLMRGEFWKKLVLDAKNRDRYTGGDVTKMLNQHSSKYPAPKQGY 1808
>gi|430813344|emb|CCJ29314.1| unnamed protein product [Pneumocystis jirovecii]
Length = 1924
Score = 158 bits (399), Expect = 4e-36, Method: Composition-based stats.
Identities = 83/208 (39%), Positives = 124/208 (59%), Gaps = 4/208 (1%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
+LS+QYRMHP I FPS+ FY RL + E + +++ + PY FFD IHG E
Sbjct: 1606 MLSIQYRMHPCISQFPSKFFYSNRLINDEGIEEKTKRSWHQVDLFGPYRFFD-IHGYEDE 1664
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
S S N+ EA+ + +Y+ + ++ S+ GIITPYK QL ++ F
Sbjct: 1665 T--SRSPFNLMEARATLLIYDAIIRSFPSINFNGY-FGIITPYKQQLNKIKELFIKKYGD 1721
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGNA 181
K++ NTVD FQGQE+D+I++SCVR+S G+GF++DIRRMNV+LTRA+ ++ ++GN
Sbjct: 1722 SILKNIDFNTVDGFQGQEKDIIMLSCVRSSAKGIGFLSDIRRMNVSLTRAKSSMIILGNV 1781
Query: 182 GALTQSDDWAALIADSKARNCYMDMDSL 209
L+ W +LI D++ R D +
Sbjct: 1782 ETLSGHFYWRSLIEDAEQRGLLTKFDDI 1809
>gi|453088648|gb|EMF16688.1| hypothetical protein SEPMUDRAFT_122176 [Mycosphaerella populorum
SO2202]
Length = 2003
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 89/204 (43%), Positives = 118/204 (57%), Gaps = 5/204 (2%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL QYRMHP I FPSR FY G L D S+ NL + ++ +L PY FFDV G+ S
Sbjct: 1594 LLDTQYRMHPDISVFPSRTFYDGLLKDGPSMANLRKQPWHASSLLAPYRFFDVA-GQHSS 1652
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGL-GKVTVGIITPYKLQLKCLQHEFRNVLN 120
S N E + + LY L+ + GK+ GII YK QL+ ++ F +
Sbjct: 1653 APRGNSLVNKAEIEVAIMLYTRLRTDFPTYDFTGKI--GIIVTYKAQLREMKGTFISKFG 1710
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVMG 179
+ + NT DAFQG+E ++II SCVRAS G +GF+ DIRRMNV LTRA+ +LWV+G
Sbjct: 1711 PDIADYIEFNTTDAFQGRESEIIIFSCVRASPAGTIGFLQDIRRMNVGLTRAKSSLWVLG 1770
Query: 180 NAGALTQSDDWAALIADSKARNCY 203
NA L+ W L+ D+K R+ Y
Sbjct: 1771 NASTLSSGRYWKKLVDDAKGRDNY 1794
>gi|328867998|gb|EGG16379.1| DNA2/NAM7 helicase family protein [Dictyostelium fasciculatum]
Length = 917
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 88/208 (42%), Positives = 124/208 (59%), Gaps = 14/208 (6%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRE- 59
++L+ QYRMH IR FPSRHFY L D ++ + Y+ + P VF+D+ RE
Sbjct: 631 LMLTTQYRMHSTIRQFPSRHFYNDLLEDGPNIADRATN-YHGNSFFGPLVFYDLPFAREI 689
Query: 60 SHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVL 119
H GGSV N DE + LY+ + +T +GII+PY+ Q+ L+ F+N
Sbjct: 690 KHGGGSVF--NEDECFMAIYLYQLILRTYPEQDFTG-RIGIISPYRQQVLTLREFFKNC- 745
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH---GVGFVADIRRMNVALTRARRALW 176
+ I+TVD FQG+ER++II SCVRAS+ G+GF+AD+RRMNVALTR R +L
Sbjct: 746 -----PGISIDTVDGFQGREREIIIFSCVRASDQEGAGIGFLADVRRMNVALTRPRSSLL 800
Query: 177 VMGNAGALTQSDDWAALIADSKARNCYM 204
V+GNA L+ + DW LI ++ NC +
Sbjct: 801 VIGNAKTLSINKDWNELIKHCQSNNCLV 828
>gi|149241697|ref|XP_001526342.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450465|gb|EDK44721.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 2053
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 90/210 (42%), Positives = 127/210 (60%), Gaps = 13/210 (6%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL+VQYRMHP I FPS FYQ +L D ++ ++ L PY FFD I R +
Sbjct: 1656 LLNVQYRMHPQISQFPSAEFYQSKLKDGPNMEEKNKRPWHSIKPLSPYRFFD-IASRHTK 1714
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGL-GKVTVGIITPYKLQLKCLQHEFRNVLN 120
+ S N++EA+ + L + L + GKV GII+PYK Q++ + ++V
Sbjct: 1715 NELTRSLFNLEEARICLQLVQKLITLIPQQAFAGKV--GIISPYKEQIRTI----KDVFV 1768
Query: 121 SEEGK----DLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRAL 175
E GK ++ NTVD FQGQE+++IIMSCVRAS G VGF++D+RRMNVALTRAR L
Sbjct: 1769 REYGKIILNEIDFNTVDGFQGQEKEIIIMSCVRASADGNVGFLSDVRRMNVALTRARTTL 1828
Query: 176 WVMGNAGALTQSDDWAALIADSKARNCYMD 205
W++GN +L ++ W L+ D++ RN +
Sbjct: 1829 WILGNRESLLRNKVWNRLLKDAEQRNAVTN 1858
>gi|226500364|ref|NP_001146818.1| uncharacterized protein LOC100280423 [Zea mays]
gi|219888873|gb|ACL54811.1| unknown [Zea mays]
Length = 399
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 91/245 (37%), Positives = 133/245 (54%), Gaps = 10/245 (4%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
+L +QYRMHP I FPS+ FY+G L D E + ++ P+ FFDV G ES
Sbjct: 126 MLKIQYRMHPEISTFPSKEFYEGVLQDGEGLSR--KRPWHSYSCFGPFCFFDV-DGIESQ 182
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
GS S+ N DE +F LY L + VG+I+PY+ Q+K L+ FR+
Sbjct: 183 PSGSGSWVNQDEVEFITLLYHQLALRYPELK-SSPEVGVISPYRHQVKLLKDSFRSTFGD 241
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASN-HGVGFVADIRRMNVALTRARRALWVMGN 180
+ + + ++TVD FQG+E++++I SCVR + +GFV+D RRMNVA+TRA+ A+ V+G+
Sbjct: 242 QSRELIDVSTVDGFQGREKEIVIFSCVRCNKEQKIGFVSDFRRMNVAITRAKSAVLVVGS 301
Query: 181 AGALTQSDDWAALIADSKARNCYMDMDSLPKEFSVALAAKAPGYGPLQGKIPH--NARGL 238
A L Q W L+ +K RNC +PK + A ++ + P NAR L
Sbjct: 302 ASTLKQDKHWNNLVESAKERNCLF---KVPKPLTAFFAEDNLKTMKVERRPPPELNARVL 358
Query: 239 RSAGQ 243
Q
Sbjct: 359 EEINQ 363
>gi|255083106|ref|XP_002504539.1| superfamily I helicase [Micromonas sp. RCC299]
gi|226519807|gb|ACO65797.1| superfamily I helicase [Micromonas sp. RCC299]
Length = 1155
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 104/263 (39%), Positives = 142/263 (53%), Gaps = 32/263 (12%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY-YKDPVLRPYVFFDVIHGRE 59
+LLSVQYRMHP IR+FPS FY+GRL DS VI E Y K+ L Y FD HG E
Sbjct: 797 LLLSVQYRMHPEIREFPSEEFYEGRLMDSACVIKRRPEPYQQKESGLGTYRIFDA-HGLE 855
Query: 60 SHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVT---VGIITPYKLQLKCLQHEFR 116
R S S N EA VCLY+ + K L+ G G+ V ++TPYK Q+ ++ F
Sbjct: 856 -ERTTSNSVINHFEAILVVCLYKKIDKVLRD-GTGESAEGKVSVVTPYKEQVTVIRKAFE 913
Query: 117 NVLNSEEGKD---LYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRAR 172
+ E + INT+D +QGQE DVII S VR S + G+GF++DIRR+NVA+TRA+
Sbjct: 914 QLCGGEGAASRLRVQINTIDGYQGQESDVIIFSTVRGSGDGGIGFLSDIRRLNVAITRAK 973
Query: 173 RALWVMGNAGALTQSDD------WAALIADSKARNCYMD--------MDSLPKEFSVALA 218
+AL+++G G L + W L+ ++ R C +D D +P E
Sbjct: 974 KALYIVGRVGKLRAAQAGGEFTVWRDLVQNAMDRGCIVDDADPRVTFADVVPVEEQERAM 1033
Query: 219 AK-------APGYGPLQGKIPHN 234
+K G+ PL+ + P N
Sbjct: 1034 SKLTKGNRRGVGFKPLKPRHPEN 1056
>gi|385305772|gb|EIF49721.1| putative nuclear rna processing factor [Dekkera bruxellensis
AWRI1499]
Length = 1066
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 88/201 (43%), Positives = 118/201 (58%), Gaps = 5/201 (2%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL+VQYRMHP I FPS+ FY RL D ++ + + + + PY FFDV G E
Sbjct: 704 LLNVQYRMHPEISMFPSKEFYHSRLLDGPNMAENNSKPW--NSLYGPYRFFDV-KGAEEQ 760
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
+ S N EA + L E L + + + VGII+PYK Q+K L+ F N
Sbjct: 761 NEATKSVFNYTEASLALELVEDLFEKFSEINWAGL-VGIISPYKEQVKLLKKLFINRFGR 819
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVMGN 180
+ NTVD FQGQE++VI+ SCV A NH G+GF+ADIRRMNVALTRAR +LW++G+
Sbjct: 820 IITTQIDFNTVDGFQGQEKEVIVFSCVXAENHTGIGFLADIRRMNVALTRARSSLWILGS 879
Query: 181 AGALTQSDDWAALIADSKARN 201
AL + W LI ++ R+
Sbjct: 880 KXALVNNKTWRDLIENATERH 900
>gi|224140843|ref|XP_002323788.1| predicted protein [Populus trichocarpa]
gi|222866790|gb|EEF03921.1| predicted protein [Populus trichocarpa]
Length = 565
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/202 (41%), Positives = 118/202 (58%), Gaps = 2/202 (0%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
+L +QYRMHP IR FPS FY L D++ + +++ P+ FFDV G+ES
Sbjct: 294 MLKMQYRMHPEIRSFPSSEFYAEALQDADDLERRTTRDWHQYHCFGPFCFFDVHEGKESQ 353
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
GS S+ NVDE +F + LY H T+ II+PY+ Q+K Q FR+
Sbjct: 354 PSGSGSWVNVDEVEFVLLLY-HKLVTMYPELRSSSQFAIISPYRHQVKLFQDRFRDAFGQ 412
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRALWVMGN 180
E K + I TVD FQG+E+DV I SCVR++ + +GFV+D RRMNV +TRA+ A+ V+G+
Sbjct: 413 ESKKFVDIQTVDGFQGREKDVAIFSCVRSNDDRRIGFVSDARRMNVGITRAKSAVLVVGS 472
Query: 181 AGALTQSDDWAALIADSKARNC 202
A L + W L+ ++ RN
Sbjct: 473 ASTLRNDEHWNNLVESAEKRNV 494
>gi|326488401|dbj|BAJ93869.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 830
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/218 (38%), Positives = 122/218 (55%), Gaps = 8/218 (3%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
+L +QYRMHP I FPS+ FY+G L D E + ++ P+ FFDV G ESH
Sbjct: 557 MLKIQYRMHPEISVFPSKEFYEGILEDGEGLDK--KRPWHSYSCFGPFCFFDV-DGVESH 613
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
GS S N DE +F LY L + V +I+PY+ Q+K L FR+
Sbjct: 614 LSGSGSMVNEDEVEFITLLYHQLATRYPELK-SSSQVAVISPYRGQVKLLTDHFRSTFGD 672
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASN-HGVGFVADIRRMNVALTRARRALWVMGN 180
+ + + +NTVD FQG+E++++I SCVR + +GFV+D RRMNVA+TRAR A+ V+G+
Sbjct: 673 QSKEVIDVNTVDGFQGREKELVIFSCVRCNKEQSIGFVSDFRRMNVAITRARSAVLVIGS 732
Query: 181 AGALTQSDDWAALIADSKARNCYMDMDSLPKEFSVALA 218
+ + W L+ +K RN Y +PK F+ A
Sbjct: 733 SSTFKKDKHWTNLVESAKERNRYF---KVPKPFTAFFA 767
>gi|357163477|ref|XP_003579744.1| PREDICTED: probable helicase DDB_G0274399-like isoform 4
[Brachypodium distachyon]
Length = 762
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 88/221 (39%), Positives = 126/221 (57%), Gaps = 14/221 (6%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
+L +QYRMHP I FPS+ FY+G L D E + ++ P+ FFD I G ES
Sbjct: 491 MLKIQYRMHPEISIFPSKEFYEGILQDGEGLNK--KRPWHSYSCFGPFCFFD-IDGIESQ 547
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQK---TLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV 118
GS S+ N DE +F +Y L LKS V +I+PY LQ+K L+ FR+
Sbjct: 548 PSGSGSWVNEDEVEFITLIYHQLATHYPELKSSS----QVAVISPYSLQVKLLKDRFRST 603
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASN-HGVGFVADIRRMNVALTRARRALWV 177
+ + + +NTVD FQG+E++V+I SCVR + +GFV+D RRMNVA+TRAR A+ V
Sbjct: 604 FGDQSKEVIDVNTVDGFQGREKEVVIFSCVRCNKEQNIGFVSDFRRMNVAITRARSAVLV 663
Query: 178 MGNAGALTQSDDWAALIADSKARNCYMDMDSLPKEFSVALA 218
+G+A L Q W L+ +K R+ + ++ K F+ A
Sbjct: 664 IGSASTLKQDKHWNNLVESAKERDRFF---TVSKPFTTFFA 701
>gi|357163468|ref|XP_003579741.1| PREDICTED: probable helicase DDB_G0274399-like isoform 1
[Brachypodium distachyon]
Length = 802
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 88/221 (39%), Positives = 126/221 (57%), Gaps = 14/221 (6%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
+L +QYRMHP I FPS+ FY+G L D E + ++ P+ FFD I G ES
Sbjct: 531 MLKIQYRMHPEISIFPSKEFYEGILQDGEGLNK--KRPWHSYSCFGPFCFFD-IDGIESQ 587
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQK---TLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV 118
GS S+ N DE +F +Y L LKS V +I+PY LQ+K L+ FR+
Sbjct: 588 PSGSGSWVNEDEVEFITLIYHQLATHYPELKSSS----QVAVISPYSLQVKLLKDRFRST 643
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASN-HGVGFVADIRRMNVALTRARRALWV 177
+ + + +NTVD FQG+E++V+I SCVR + +GFV+D RRMNVA+TRAR A+ V
Sbjct: 644 FGDQSKEVIDVNTVDGFQGREKEVVIFSCVRCNKEQNIGFVSDFRRMNVAITRARSAVLV 703
Query: 178 MGNAGALTQSDDWAALIADSKARNCYMDMDSLPKEFSVALA 218
+G+A L Q W L+ +K R+ + ++ K F+ A
Sbjct: 704 IGSASTLKQDKHWNNLVESAKERDRFF---TVSKPFTTFFA 741
>gi|42566850|ref|NP_193292.3| protein MAGATAMA 3 [Arabidopsis thaliana]
gi|384950687|sp|B6SFA4.1|MAA3_ARATH RecName: Full=Probable helicase MAGATAMA 3; AltName: Full=SEN1-like
protein
gi|209574484|gb|ACI63222.1| MAA3 [Arabidopsis thaliana]
gi|332658227|gb|AEE83627.1| protein MAGATAMA 3 [Arabidopsis thaliana]
Length = 818
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/202 (39%), Positives = 119/202 (58%), Gaps = 3/202 (1%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES- 60
+L QYRMHP IR FPS+ FY+G L D + ++K P+ FFD+ G+ES
Sbjct: 551 MLKTQYRMHPEIRSFPSKQFYEGALEDGSDIEAQTTRDWHKYRCFGPFCFFDIHEGKESQ 610
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
H G + S N+DE +F + +Y L + + II+PY Q+K + F+ +
Sbjct: 611 HPGATGSRVNLDEVEFVLLIYHRLVTMYPELK-SSSQLAIISPYNYQVKTFKDRFKEMFG 669
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVMG 179
+E K + INTVD FQG+E+DV I SCVRA+ +G +GF+++ RRMNV +TRA+ ++ V+G
Sbjct: 670 TEAEKVVDINTVDGFQGREKDVAIFSCVRANENGQIGFLSNSRRMNVGITRAKSSVLVVG 729
Query: 180 NAGALTQSDDWAALIADSKARN 201
+A L W LI ++ RN
Sbjct: 730 SAATLKSDPLWKNLIESAEQRN 751
>gi|444322031|ref|XP_004181671.1| hypothetical protein TBLA_0G02100 [Tetrapisispora blattae CBS 6284]
gi|387514716|emb|CCH62152.1| hypothetical protein TBLA_0G02100 [Tetrapisispora blattae CBS 6284]
Length = 2235
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/203 (36%), Positives = 122/203 (60%), Gaps = 2/203 (0%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL+VQYRMHP I FPS+ FY+ L D + + ++ L PY FFD++ G++
Sbjct: 1610 LLNVQYRMHPLISRFPSKEFYKRELKDGPDMEKITARPWHSLEALGPYKFFDIVSGKQEQ 1669
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
++SY N +E + + L ++L + + +G+I+PY+ Q+ ++ +F +
Sbjct: 1670 NIKTMSYVNPEEVRVAIELIDYLLRHFEKKVDFTGKIGVISPYREQMMKMKRDFNSYFGG 1729
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVR--ASNHGVGFVADIRRMNVALTRARRALWVMG 179
+ NT+D FQGQE+++I++SCVR AS GVGF+ D RRMNVALTRA+ ++W++G
Sbjct: 1730 VISTYVDFNTIDGFQGQEKEIILLSCVRADASKTGVGFLKDFRRMNVALTRAKSSMWILG 1789
Query: 180 NAGALTQSDDWAALIADSKARNC 202
+ +L ++ W LI D+ RN
Sbjct: 1790 HHKSLYKNKLWKHLIEDAHKRNA 1812
>gi|357163471|ref|XP_003579742.1| PREDICTED: probable helicase DDB_G0274399-like isoform 2
[Brachypodium distachyon]
Length = 820
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/221 (39%), Positives = 126/221 (57%), Gaps = 14/221 (6%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
+L +QYRMHP I FPS+ FY+G L D E + ++ P+ FFD I G ES
Sbjct: 549 MLKIQYRMHPEISIFPSKEFYEGILQDGEGLNK--KRPWHSYSCFGPFCFFD-IDGIESQ 605
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQK---TLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV 118
GS S+ N DE +F +Y L LKS V +I+PY LQ+K L+ FR+
Sbjct: 606 PSGSGSWVNEDEVEFITLIYHQLATHYPELKSSS----QVAVISPYSLQVKLLKDRFRST 661
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASN-HGVGFVADIRRMNVALTRARRALWV 177
+ + + +NTVD FQG+E++V+I SCVR + +GFV+D RRMNVA+TRAR A+ V
Sbjct: 662 FGDQSKEVIDVNTVDGFQGREKEVVIFSCVRCNKEQNIGFVSDFRRMNVAITRARSAVLV 721
Query: 178 MGNAGALTQSDDWAALIADSKARNCYMDMDSLPKEFSVALA 218
+G+A L Q W L+ +K R+ + ++ K F+ A
Sbjct: 722 IGSASTLKQDKHWNNLVESAKERDRFF---TVSKPFTTFFA 759
>gi|357154159|ref|XP_003576691.1| PREDICTED: uncharacterized protein LOC100835663 [Brachypodium
distachyon]
Length = 2045
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/220 (38%), Positives = 127/220 (57%), Gaps = 15/220 (6%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
++L+ QYRMHP+I FPS HFY+ +L D + +++ L PY+FFD+ GRE
Sbjct: 1456 IMLTKQYRMHPNISRFPSLHFYENKLLDGVQMAE-KSAPFHEHNHLGPYMFFDIADGRER 1514
Query: 61 H--RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV 118
+ S N EA + + L+ + +GIITPY+ QL L+ F +
Sbjct: 1515 SGTNAATQSLCNQYEADAALEILSFLKNRYPA-EFSCRKIGIITPYRSQLSLLRSRFTSF 1573
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASN-----------HGVGFVADIRRMNVA 167
E ++ INTVD FQG+E D++++S VRASN +GFVAD+RRMNVA
Sbjct: 1574 FGPEIVAEMEINTVDGFQGREVDILVLSTVRASNSSGDRHHAGEARSIGFVADVRRMNVA 1633
Query: 168 LTRARRALWVMGNAGALTQSDDWAALIADSKARNCYMDMD 207
LTRAR +LW++GNA L + WA+L+ ++K RN ++ ++
Sbjct: 1634 LTRARFSLWIVGNARTLQTNSHWASLVQNAKERNMFISVE 1673
>gi|357163474|ref|XP_003579743.1| PREDICTED: probable helicase DDB_G0274399-like isoform 3
[Brachypodium distachyon]
Length = 780
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/221 (39%), Positives = 126/221 (57%), Gaps = 14/221 (6%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
+L +QYRMHP I FPS+ FY+G L D E + ++ P+ FFD I G ES
Sbjct: 509 MLKIQYRMHPEISIFPSKEFYEGILQDGEGLNK--KRPWHSYSCFGPFCFFD-IDGIESQ 565
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQK---TLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV 118
GS S+ N DE +F +Y L LKS V +I+PY LQ+K L+ FR+
Sbjct: 566 PSGSGSWVNEDEVEFITLIYHQLATHYPELKSSS----QVAVISPYSLQVKLLKDRFRST 621
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASN-HGVGFVADIRRMNVALTRARRALWV 177
+ + + +NTVD FQG+E++V+I SCVR + +GFV+D RRMNVA+TRAR A+ V
Sbjct: 622 FGDQSKEVIDVNTVDGFQGREKEVVIFSCVRCNKEQNIGFVSDFRRMNVAITRARSAVLV 681
Query: 178 MGNAGALTQSDDWAALIADSKARNCYMDMDSLPKEFSVALA 218
+G+A L Q W L+ +K R+ + ++ K F+ A
Sbjct: 682 IGSASTLKQDKHWNNLVESAKERDRFF---TVSKPFTTFFA 719
>gi|440634637|gb|ELR04556.1| hypothetical protein GMDG_06846 [Geomyces destructans 20631-21]
Length = 1897
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/212 (43%), Positives = 120/212 (56%), Gaps = 12/212 (5%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL QYRMHP I FP FY G L D + L + ++ +L PY FFD + G S
Sbjct: 1641 LLDTQYRMHPEISSFPRGEFYDGELVDGAGLEKLRQKPWHASALLGPYRFFD-LKGTSSR 1699
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
GG S N DE K + LY+ L+ + K VGIITPYK QL+ E R L
Sbjct: 1700 SGGH-SMVNYDEIKVALQLYKRLKTDYPFFDI-KGKVGIITPYKGQLR----EIRFALQR 1753
Query: 122 EEGKDLY----INTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWV 177
E G D+ NT DAFQG+E +VII SCVR GVGF+ D+RRMNV LTRA+ +LWV
Sbjct: 1754 EYGDDILDDIDTNTTDAFQGREAEVIIFSCVRTMG-GVGFLKDVRRMNVGLTRAKSSLWV 1812
Query: 178 MGNAGALTQSDDWAALIADSKARNCYMDMDSL 209
+G++ L + W+ +I D+K R+ + D L
Sbjct: 1813 IGDSSTLQRDRVWSNMIQDAKRRDRFTSGDVL 1844
>gi|354545469|emb|CCE42197.1| hypothetical protein CPAR2_807460 [Candida parapsilosis]
Length = 1950
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/202 (42%), Positives = 120/202 (59%), Gaps = 7/202 (3%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL+ QYRMHP I FPS FYQ +L D + ++ L PY FFD++ E +
Sbjct: 1578 LLNTQYRMHPMISKFPSAEFYQSKLIDGPGMQEKNTRPWHSVDPLSPYRFFDIVSRHEKN 1637
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVT--VGIITPYKLQLKCLQHEFRNVL 119
Y N +EA VCL + +QK + + + +GII+PYK Q+K ++ F
Sbjct: 1638 ELTRSLY-NTEEA--NVCL-QLVQKMMTMVPQKDIAGKIGIISPYKEQIKTIKRVFERAF 1693
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVM 178
++ NTVD FQGQE+++IIMSCVRAS +G +GF++DIRRMNVALTRA LW++
Sbjct: 1694 GRLIFNEIDFNTVDGFQGQEKEIIIMSCVRASANGSIGFLSDIRRMNVALTRACTTLWIL 1753
Query: 179 GNAGALTQSDDWAALIADSKAR 200
GN +L + + W LI D++ R
Sbjct: 1754 GNKNSLARDEVWKRLIEDAEKR 1775
>gi|242038133|ref|XP_002466461.1| hypothetical protein SORBIDRAFT_01g008150 [Sorghum bicolor]
gi|241920315|gb|EER93459.1| hypothetical protein SORBIDRAFT_01g008150 [Sorghum bicolor]
Length = 818
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 84/214 (39%), Positives = 124/214 (57%), Gaps = 8/214 (3%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
+L +QYRMHP I FPS+ FY+G L D E + ++ P+ FFDV G ES
Sbjct: 545 MLKIQYRMHPEISMFPSKEFYEGVLQDGEGLSR--KRPWHSYSCFGPFCFFDV-DGIESQ 601
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
GS S+ N DE +F LY L + VG+I+PY+ Q+K L+ FR+
Sbjct: 602 PSGSGSWVNQDEVEFITLLYHQLAMRYPELK-SSPEVGVISPYRHQVKLLKDSFRSTFGD 660
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRALWVMGN 180
+ + + ++TVD FQG+E++++I SCVR + +GFV+D RRMNVA+TRA+ A+ V+G+
Sbjct: 661 QSKELIDVSTVDGFQGREKEIVIFSCVRCNEEQKIGFVSDFRRMNVAITRAKSAVLVVGS 720
Query: 181 AGALTQSDDWAALIADSKARNCYMDMDSLPKEFS 214
A L Q W L+ +K RN + +PK F+
Sbjct: 721 ASTLKQDKHWNNLVESAKERNRFF---KVPKPFT 751
>gi|57834047|emb|CAE05419.2| OSJNBa0035I04.7 [Oryza sativa Japonica Group]
Length = 744
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 84/214 (39%), Positives = 122/214 (57%), Gaps = 8/214 (3%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
+L +QYRMHP I FPS+ FY+G L D E + ++ P+ FFDV G ES
Sbjct: 472 MLKIQYRMHPEISIFPSKEFYEGVLEDGEGLSK--KRPWHSYSCFGPFCFFDV-DGTESQ 528
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
GS S+ N DE +F LY + + V +I+PY+ Q+K L+ FR+
Sbjct: 529 PSGSGSWVNEDEVEFITLLYHQMAMRYPELK-SSSQVAVISPYRHQVKLLKDHFRSTFGD 587
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASN-HGVGFVADIRRMNVALTRARRALWVMGN 180
+ + + +NTVD FQG+E++V+I SCVR + +GFV+D RRMNVA+TRAR A+ V+G+
Sbjct: 588 QSKEVIDVNTVDGFQGREKEVVIFSCVRCNKEQKIGFVSDFRRMNVAITRARSAVLVVGS 647
Query: 181 AGALTQSDDWAALIADSKARNCYMDMDSLPKEFS 214
A L + W L+ +K R Y +PK F+
Sbjct: 648 ASTLKEDKHWNNLVESAKERGRYF---QVPKPFT 678
>gi|297723147|ref|NP_001173937.1| Os04g0424200 [Oryza sativa Japonica Group]
gi|255675460|dbj|BAH92665.1| Os04g0424200 [Oryza sativa Japonica Group]
Length = 836
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 84/214 (39%), Positives = 122/214 (57%), Gaps = 8/214 (3%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
+L +QYRMHP I FPS+ FY+G L D E + ++ P+ FFDV G ES
Sbjct: 539 MLKIQYRMHPEISIFPSKEFYEGVLEDGEGLSK--KRPWHSYSCFGPFCFFDV-DGTESQ 595
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
GS S+ N DE +F LY + + V +I+PY+ Q+K L+ FR+
Sbjct: 596 PSGSGSWVNEDEVEFITLLYHQMAMRYPELK-SSSQVAVISPYRHQVKLLKDHFRSTFGD 654
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASN-HGVGFVADIRRMNVALTRARRALWVMGN 180
+ + + +NTVD FQG+E++V+I SCVR + +GFV+D RRMNVA+TRAR A+ V+G+
Sbjct: 655 QSKEVIDVNTVDGFQGREKEVVIFSCVRCNKEQKIGFVSDFRRMNVAITRARSAVLVVGS 714
Query: 181 AGALTQSDDWAALIADSKARNCYMDMDSLPKEFS 214
A L + W L+ +K R Y +PK F+
Sbjct: 715 ASTLKEDKHWNNLVESAKERGRYF---QVPKPFT 745
>gi|297605680|ref|NP_001057481.2| Os06g0310200 [Oryza sativa Japonica Group]
gi|255676976|dbj|BAF19395.2| Os06g0310200 [Oryza sativa Japonica Group]
Length = 1029
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 84/214 (39%), Positives = 122/214 (57%), Gaps = 8/214 (3%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
+L +QYRMHP I FPS+ FY+G L D E + ++ P+ FFDV G ES
Sbjct: 569 MLKIQYRMHPEISIFPSKEFYEGVLEDGEGLSK--KRPWHSYSCFGPFCFFDV-DGTESQ 625
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
GS S+ N DE +F LY + + V +I+PY+ Q+K L+ FR+
Sbjct: 626 PSGSGSWVNEDEVEFITLLYHQMAMRYPELK-SSSQVAVISPYRHQVKLLKDHFRSTFGD 684
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASN-HGVGFVADIRRMNVALTRARRALWVMGN 180
+ + + +NTVD FQG+E++V+I SCVR + +GFV+D RRMNVA+TRAR A+ V+G+
Sbjct: 685 QSKEVIDVNTVDGFQGREKEVVIFSCVRCNKEQKIGFVSDFRRMNVAITRARSAVLVVGS 744
Query: 181 AGALTQSDDWAALIADSKARNCYMDMDSLPKEFS 214
A L + W L+ +K R Y +PK F+
Sbjct: 745 ASTLKEDKHWNNLVESAKERGRYF---QVPKPFT 775
>gi|255544500|ref|XP_002513311.1| splicing endonuclease positive effector sen1, putative [Ricinus
communis]
gi|223547219|gb|EEF48714.1| splicing endonuclease positive effector sen1, putative [Ricinus
communis]
Length = 2110
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 106/284 (37%), Positives = 149/284 (52%), Gaps = 21/284 (7%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEV--YYKDPVLRPYVFFDVIHGRE 59
+L+ QYRMHP I FPS HFY G+L + E N+ ++ +++ L PY F+DVI G+E
Sbjct: 1533 MLTKQYRMHPDICQFPSLHFYDGKLLNGE---NMSSKLVPFHETEGLGPYAFYDVIDGQE 1589
Query: 60 SHRGGSVSYQ--NVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRN 117
S ++ N EA V L +K S G +GIITPYK QL L+ +
Sbjct: 1590 LRGKNSAAFSLYNEREADAAVELLRFFKKRHPSEFEGG-KIGIITPYKCQLSLLRSRLSS 1648
Query: 118 VLNSEEGKDLYINTVDAFQGQERDVIIMSCVRA----------SNHGVGFVADIRRMNVA 167
S D+ NTVD FQG+E D++I+S VRA ++ +GFVAD+RRMNVA
Sbjct: 1649 AFGSSVIADMEFNTVDGFQGREVDILILSSVRAGEAYTHVNGVNSSSIGFVADVRRMNVA 1708
Query: 168 LTRARRALWVMGNAGALTQSDDWAALIADSKARNCYMDMDSLPKEFSVA-LAAKAPGYGP 226
LTRA+ +LW+ GNA L + +WAALI D+K RN + + K + A AP
Sbjct: 1709 LTRAKLSLWIFGNARTLQANHNWAALIKDAKQRNLVISVKRPYKFLTTAPRDHSAPEKSD 1768
Query: 227 LQGKIPHNARGLRSAGQRHRSFDMNMESRSGTPSEDDEKVSRNG 270
+ N R ++HRS GT +EDD +++
Sbjct: 1769 NHSRQAKNFGNFREPSKQHRS--SKHIGSVGTVTEDDVSANKDS 1810
>gi|222628874|gb|EEE61006.1| hypothetical protein OsJ_14821 [Oryza sativa Japonica Group]
Length = 848
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 84/214 (39%), Positives = 122/214 (57%), Gaps = 8/214 (3%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
+L +QYRMHP I FPS+ FY+G L D E + ++ P+ FFDV G ES
Sbjct: 576 MLKIQYRMHPEISIFPSKEFYEGVLEDGEGLSK--KRPWHSYSCFGPFCFFDV-DGTESQ 632
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
GS S+ N DE +F LY + + V +I+PY+ Q+K L+ FR+
Sbjct: 633 PSGSGSWVNEDEVEFITLLYHQMAMRYPELK-SSSQVAVISPYRHQVKLLKDHFRSTFGD 691
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASN-HGVGFVADIRRMNVALTRARRALWVMGN 180
+ + + +NTVD FQG+E++V+I SCVR + +GFV+D RRMNVA+TRAR A+ V+G+
Sbjct: 692 QSKEVIDVNTVDGFQGREKEVVIFSCVRCNKEQKIGFVSDFRRMNVAITRARSAVLVVGS 751
Query: 181 AGALTQSDDWAALIADSKARNCYMDMDSLPKEFS 214
A L + W L+ +K R Y +PK F+
Sbjct: 752 ASTLKEDKHWNNLVESAKERGRYF---QVPKPFT 782
>gi|218194850|gb|EEC77277.1| hypothetical protein OsI_15909 [Oryza sativa Indica Group]
Length = 980
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 84/214 (39%), Positives = 122/214 (57%), Gaps = 8/214 (3%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
+L +QYRMHP I FPS+ FY+G L D E + ++ P+ FFDV G ES
Sbjct: 708 MLKIQYRMHPEISIFPSKEFYEGVLEDGEGLSK--KRPWHSYSCFGPFCFFDV-DGTESQ 764
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
GS S+ N DE +F LY + + V +I+PY+ Q+K L+ FR+
Sbjct: 765 PSGSGSWVNEDEVEFITLLYHQMAMRYPELK-SSSQVAVISPYRHQVKLLKDHFRSTFGD 823
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASN-HGVGFVADIRRMNVALTRARRALWVMGN 180
+ + + +NTVD FQG+E++V+I SCVR + +GFV+D RRMNVA+TRAR A+ V+G+
Sbjct: 824 QSKEVIDVNTVDGFQGREKEVVIFSCVRCNKEQKIGFVSDFRRMNVAITRARSAVLVVGS 883
Query: 181 AGALTQSDDWAALIADSKARNCYMDMDSLPKEFS 214
A L + W L+ +K R Y +PK F+
Sbjct: 884 ASTLKEDKHWNNLVESAKERGRYF---QVPKPFT 914
>gi|54290635|dbj|BAD62206.1| regulator of nonsense transcripts 1-like [Oryza sativa Japonica
Group]
Length = 788
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 84/214 (39%), Positives = 122/214 (57%), Gaps = 8/214 (3%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
+L +QYRMHP I FPS+ FY+G L D E + ++ P+ FFDV G ES
Sbjct: 516 MLKIQYRMHPEISIFPSKEFYEGVLEDGEGLSK--KRPWHSYSCFGPFCFFDV-DGTESQ 572
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
GS S+ N DE +F LY + + V +I+PY+ Q+K L+ FR+
Sbjct: 573 PSGSGSWVNEDEVEFITLLYHQMAMRYPELK-SSSQVAVISPYRHQVKLLKDHFRSTFGD 631
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASN-HGVGFVADIRRMNVALTRARRALWVMGN 180
+ + + +NTVD FQG+E++V+I SCVR + +GFV+D RRMNVA+TRAR A+ V+G+
Sbjct: 632 QSKEVIDVNTVDGFQGREKEVVIFSCVRCNKEQKIGFVSDFRRMNVAITRARSAVLVVGS 691
Query: 181 AGALTQSDDWAALIADSKARNCYMDMDSLPKEFS 214
A L + W L+ +K R Y +PK F+
Sbjct: 692 ASTLKEDKHWNNLVESAKERGRYF---QVPKPFT 722
>gi|32490215|emb|CAE05958.1| OSJNBb0088C09.17 [Oryza sativa Japonica Group]
gi|116309413|emb|CAH66489.1| OSIGBa0076I14.10 [Oryza sativa Indica Group]
Length = 770
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 84/214 (39%), Positives = 122/214 (57%), Gaps = 8/214 (3%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
+L +QYRMHP I FPS+ FY+G L D E + ++ P+ FFDV G ES
Sbjct: 498 MLKIQYRMHPEISIFPSKEFYEGVLEDGEGLSK--KRPWHSYSCFGPFCFFDV-DGTESQ 554
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
GS S+ N DE +F LY + + V +I+PY+ Q+K L+ FR+
Sbjct: 555 PSGSGSWVNEDEVEFITLLYHQMAMRYPELK-SSSQVAVISPYRHQVKLLKDHFRSTFGD 613
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASN-HGVGFVADIRRMNVALTRARRALWVMGN 180
+ + + +NTVD FQG+E++V+I SCVR + +GFV+D RRMNVA+TRAR A+ V+G+
Sbjct: 614 QSKEVIDVNTVDGFQGREKEVVIFSCVRCNKEQKIGFVSDFRRMNVAITRARSAVLVVGS 673
Query: 181 AGALTQSDDWAALIADSKARNCYMDMDSLPKEFS 214
A L + W L+ +K R Y +PK F+
Sbjct: 674 ASTLKEDKHWNNLVESAKERGRYF---QVPKPFT 704
>gi|254568798|ref|XP_002491509.1| Presumed helicase required for RNA polymerase II transcription
termination and processing of RNAs [Komagataella pastoris
GS115]
gi|238031306|emb|CAY69229.1| Presumed helicase required for RNA polymerase II transcription
termination and processing of RNAs [Komagataella pastoris
GS115]
Length = 2146
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 100/262 (38%), Positives = 138/262 (52%), Gaps = 14/262 (5%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL+VQYRMHP I FPS+ FY G+L D E ++K + PY F DV G+ES
Sbjct: 1588 LLNVQYRMHPQISVFPSKEFYNGKLIDGEGTETKNTRSWHKK--IPPYCFIDVT-GKEST 1644
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
+ S N EA+ V L + L + +G+I+PYK Q+ L+
Sbjct: 1645 NTSNKSLFNRAEAQAVVSLIDALLGLDRDFNFAS-KIGVISPYKQQVVLLRDMILRKFGR 1703
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRA-SNHGVGFVADIRRMNVALTRARRALWVMGN 180
G D +NTVD FQGQE+DVI+ SCVRA GVGF+AD+RR+NVALTRA+ L ++G+
Sbjct: 1704 NIGID--VNTVDGFQGQEKDVILFSCVRADETKGVGFLADVRRLNVALTRAKSTLLIVGH 1761
Query: 181 AGALTQSDDWAALIADSKARNCYMDMDSL----PKEFSVALAAKAPGYGPLQGKIPHNAR 236
A L+ W L+ DSK RN + SL + +V + G ++G +P R
Sbjct: 1762 ASNLSGHSLWRHLVQDSKDRNVFFTQRSLLDGGKGDVTVGVLPSGKGKRKIEGILPPEKR 1821
Query: 237 GLRSAGQRHRSF--DMNMESRS 256
+ R+ F +N E RS
Sbjct: 1822 K-NTTANRNTDFKGQLNNEQRS 1842
>gi|328351981|emb|CCA38380.1| hypothetical protein PP7435_Chr2-0694 [Komagataella pastoris CBS
7435]
Length = 2154
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 100/262 (38%), Positives = 138/262 (52%), Gaps = 14/262 (5%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL+VQYRMHP I FPS+ FY G+L D E ++K + PY F DV G+ES
Sbjct: 1588 LLNVQYRMHPQISVFPSKEFYNGKLIDGEGTETKNTRSWHKK--IPPYCFIDVT-GKEST 1644
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
+ S N EA+ V L + L + +G+I+PYK Q+ L+
Sbjct: 1645 NTSNKSLFNRAEAQAVVSLIDALLGLDRDFNFAS-KIGVISPYKQQVVLLRDMILRKFGR 1703
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRA-SNHGVGFVADIRRMNVALTRARRALWVMGN 180
G D +NTVD FQGQE+DVI+ SCVRA GVGF+AD+RR+NVALTRA+ L ++G+
Sbjct: 1704 NIGID--VNTVDGFQGQEKDVILFSCVRADETKGVGFLADVRRLNVALTRAKSTLLIVGH 1761
Query: 181 AGALTQSDDWAALIADSKARNCYMDMDSL----PKEFSVALAAKAPGYGPLQGKIPHNAR 236
A L+ W L+ DSK RN + SL + +V + G ++G +P R
Sbjct: 1762 ASNLSGHSLWRHLVQDSKDRNVFFTQRSLLDGGKGDVTVGVLPSGKGKRKIEGILPPEKR 1821
Query: 237 GLRSAGQRHRSF--DMNMESRS 256
+ R+ F +N E RS
Sbjct: 1822 K-NTTANRNTDFKGQLNNEQRS 1842
>gi|393212617|gb|EJC98117.1| hypothetical protein FOMMEDRAFT_97735 [Fomitiporia mediterranea
MF3/22]
Length = 1825
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 82/208 (39%), Positives = 127/208 (61%), Gaps = 4/208 (1%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LLS+QYRMHP I PS+ FY GRL D + +++++ +P Y FF V +G+E
Sbjct: 1616 LLSIQYRMHPEISLLPSKVFYGGRLRDGPDMDKKTEQLWHNEPRFGAYKFFSVENGKEEQ 1675
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
S N E + + Y+ L+K S+ VGI++PY+ Q+ ++ F +
Sbjct: 1676 ARIGHSIYNQAECRTIIAAYDRLRKQFSSINFD-YRVGIVSPYRSQVLEMRKLFTQRFGA 1734
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRA--SNHGVGFVADIRRMNVALTRARRALWVMG 179
E + NTVD FQGQE+D+I++SCVRA S VGF+ADIRRMNVA+TRAR +L++ G
Sbjct: 1735 EIVSKVDFNTVDGFQGQEKDIIMLSCVRAGTSLATVGFLADIRRMNVAITRARSSLFIFG 1794
Query: 180 NAGALTQSDD-WAALIADSKARNCYMDM 206
+A L +S+ W ++ D+++R C++++
Sbjct: 1795 HAPTLQRSNRVWKDIVDDARSRACFVEL 1822
>gi|145514990|ref|XP_001443400.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410778|emb|CAK76003.1| unnamed protein product [Paramecium tetraurelia]
Length = 1068
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 91/219 (41%), Positives = 131/219 (59%), Gaps = 19/219 (8%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN--LPDEVYYKDPVLRPYVFFDVIHGRE 59
L++QYRM IR FPS FYQ +L D ESVI LP E Y+K +L F D+I G+E
Sbjct: 831 FLNIQYRMDSEIRKFPSFEFYQNKLIDHESVIQRKLP-ENYFKKQML----FLDIIDGQE 885
Query: 60 SHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV- 118
+ + SY N EA + L +++ K+ T+G+I+ YK Q+K +Q +
Sbjct: 886 --KRDNTSYINEKEANLVIQLINSIKEQFKTQ-----TIGVISSYKAQVKLIQTLIKQSN 938
Query: 119 --LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASN-HGVGFVADIRRMNVALTRARRAL 175
L + K L +NTVD+FQGQE+D+II SCVR+S G+GF+ D RR+NVALTRA+ AL
Sbjct: 939 TRLKDIDNKILSVNTVDSFQGQEKDIIIFSCVRSSECKGIGFLNDGRRINVALTRAKFAL 998
Query: 176 WVMGNAGALTQSDDWAALIADSKARNCYMDMDSLPKEFS 214
+V+GN L++ W L+ + + R Y + + +EFS
Sbjct: 999 FVIGNGLTLSKGQLWRNLLQNMQERQLYRKI-QITEEFS 1036
>gi|302766231|ref|XP_002966536.1| hypothetical protein SELMODRAFT_439557 [Selaginella moellendorffii]
gi|300165956|gb|EFJ32563.1| hypothetical protein SELMODRAFT_439557 [Selaginella moellendorffii]
Length = 1019
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 91/201 (45%), Positives = 129/201 (64%), Gaps = 16/201 (7%)
Query: 7 YRMHPHIRDFPSRHFYQGRLTDSESVINLPDEV-YYKDPVLRPYVFFDVIHGRESHRGGS 65
YRMHP IR FPS H+Y G+L D +V++ ++++ PY FFD+ G+E R GS
Sbjct: 807 YRMHPEIRSFPSTHYYGGQLKDGSTVLHGNRSAPFHRERRFEPYRFFDIRDGQE--RPGS 864
Query: 66 V-SYQNVDEAKFGVCLYEHLQKTL-KSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNSEE 123
+ S N DEA+F L L++ + + G++ G+ITPY+ Q K LQ R++
Sbjct: 865 MQSLTNPDEAEFIFQLLRVLKERYPEEVRPGRI--GVITPYQEQRKVLQENMRSL---HS 919
Query: 124 GKDLYINTVDAFQGQERDVIIMSCVRAS----NHGVGFVADIRRMNVALTRARRALWVMG 179
G D +NTVD+FQG+E D+I++S VRAS GVGF+AD+RRMNVALTRA+ +LWV+G
Sbjct: 920 GID--VNTVDSFQGREADIIVLSTVRASFGESQAGVGFLADVRRMNVALTRAKFSLWVVG 977
Query: 180 NAGALTQSDDWAALIADSKAR 200
NA L ++ DW AL+ D + R
Sbjct: 978 NARTLERNSDWKALLQDCRRR 998
>gi|213405365|ref|XP_002173454.1| helicase sen1 [Schizosaccharomyces japonicus yFS275]
gi|212001501|gb|EEB07161.1| helicase sen1 [Schizosaccharomyces japonicus yFS275]
Length = 1719
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 82/200 (41%), Positives = 120/200 (60%), Gaps = 4/200 (2%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LLS+QYRMHP I FPS FY RL D ++V + ++K+P+ Y FDV G E
Sbjct: 1450 LLSIQYRMHPEISQFPSCQFYNSRLLDGDNVATKTLQPWHKNPLFGQYRVFDV-RGTE-K 1507
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
+ + S N +EAK L++ + + ++ +GI+TPY+ QLK L+ F
Sbjct: 1508 QSKTFSLYNPEEAKSVTDLFDLMTSSFPTVDFAS-KIGIVTPYRSQLKELRRAFSRKYGR 1566
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVMGN 180
+NT+D FQGQE+D+II+SCVR+ G +GF+ D RR+NVALTRAR +L+++GN
Sbjct: 1567 AFASKFDMNTIDGFQGQEKDIIILSCVRSETGGSIGFLRDFRRLNVALTRARSSLFIVGN 1626
Query: 181 AGALTQSDDWAALIADSKAR 200
L D W +L+A++K R
Sbjct: 1627 VETLFSDDLWGSLLANAKER 1646
>gi|170089137|ref|XP_001875791.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164649051|gb|EDR13293.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1937
Score = 154 bits (388), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 92/274 (33%), Positives = 146/274 (53%), Gaps = 24/274 (8%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LLS+QYRMHP I FPSR FY+ ++ D + + + ++ Y FF+V G E
Sbjct: 1604 LLSIQYRMHPDISRFPSRVFYESKIQDGPRMDEVTKQPWHTHVKFGTYKFFNVSQGVEEQ 1663
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
G S+ +N+ E + V LY L + K+ VG+++ Y+ Q+ L+ F
Sbjct: 1664 SGRSI--KNLAECQVAVALYNRLCQEYKAFNFDS-RVGVVSMYRAQIVELRRHFEKRFGK 1720
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASN--HGVGFVADIRRMNVALTRARRALWVMG 179
+ + NTVD FQGQE+DVII+SCVR+ VGF++D+RRMNVALTRA+ +L+++G
Sbjct: 1721 DIIGRIDFNTVDGFQGQEKDVIILSCVRSGPGLQSVGFLSDVRRMNVALTRAKSSLFILG 1780
Query: 180 NAGALTQSDD-WAALIADSKARNCYMDMDSL---------------PKEFSVALAAKAPG 223
NA L +S+D W ++ D+++R + +D+ K+ ++ A+
Sbjct: 1781 NAPTLERSNDTWREIVVDARSRLALLQVDTTFFTSTSCSPKSTEPPKKKPRISSASTTAA 1840
Query: 224 YGPLQGKIPHNARGLRSAGQRHRSFDMNMESRSG 257
P+ P RGL++A R+ S M + G
Sbjct: 1841 TVPIDLATP---RGLKAASNRNVSSPMTVSKPDG 1871
>gi|398398643|ref|XP_003852779.1| hypothetical protein MYCGRDRAFT_41426, partial [Zymoseptoria tritici
IPO323]
gi|339472660|gb|EGP87755.1| hypothetical protein MYCGRDRAFT_41426 [Zymoseptoria tritici IPO323]
Length = 1778
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 86/207 (41%), Positives = 118/207 (57%), Gaps = 2/207 (0%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL QYRMHP I FPS FY +L D ++ L + ++ +L PY F+DV G+ S
Sbjct: 1567 LLDTQYRMHPDISAFPSATFYDHKLKDGSNMAALRKKSWHASNLLAPYRFYDV-KGQHSA 1625
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
S N E + + LY L S +GIITPYK QL+ L+ +F
Sbjct: 1626 APKGFSLVNHAEVEVAMALYSRLTTDFGSTYDFSNRIGIITPYKSQLELLRKKFSTAFGL 1685
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVMGN 180
E + + NT DAFQG+E ++II SCVRAS+ GVGF+ DIRRMNV LTRA+ +LWV+GN
Sbjct: 1686 EILEKVEFNTTDAFQGREAEIIIFSCVRASDKGGVGFLQDIRRMNVGLTRAKCSLWVLGN 1745
Query: 181 AGALTQSDDWAALIADSKARNCYMDMD 207
+ +L++ W LI D + + + D
Sbjct: 1746 SESLSRGQYWRLLIEDVERKGAMVKGD 1772
>gi|297601165|ref|NP_001050457.2| Os03g0440200 [Oryza sativa Japonica Group]
gi|255674627|dbj|BAF12371.2| Os03g0440200 [Oryza sativa Japonica Group]
Length = 824
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 84/214 (39%), Positives = 121/214 (56%), Gaps = 8/214 (3%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
+L +QYRMHP I FPS+ FY+G L D E + ++ P+ FFDV G ES
Sbjct: 539 MLKIQYRMHPEISIFPSKEFYEGVLEDGEGLSK--KRPWHSYSCFGPFCFFDV-DGTESQ 595
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
GS S+ N DE +F LY + + V +I+PY+ Q+K L+ FR+
Sbjct: 596 PSGSGSWVNEDEVEFITLLYHQMAMRYPELK-SSSQVAVISPYRHQVKLLKDHFRSTFGD 654
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASN-HGVGFVADIRRMNVALTRARRALWVMGN 180
+ + + +NTVD FQG E++V+I SCVR + +GFV+D RRMNVA+TRAR A+ V+G+
Sbjct: 655 QSKEVIDVNTVDGFQGCEKEVVIFSCVRCNKEQKIGFVSDFRRMNVAITRARSAVLVVGS 714
Query: 181 AGALTQSDDWAALIADSKARNCYMDMDSLPKEFS 214
A L + W L+ +K R Y +PK F+
Sbjct: 715 ASTLKEDKHWNNLVESAKERGRYF---QVPKPFT 745
>gi|108709046|gb|ABF96841.1| expressed protein [Oryza sativa Japonica Group]
Length = 770
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 84/214 (39%), Positives = 121/214 (56%), Gaps = 8/214 (3%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
+L +QYRMHP I FPS+ FY+G L D E + ++ P+ FFDV G ES
Sbjct: 498 MLKIQYRMHPEISIFPSKEFYEGVLEDGEGLSK--KRPWHSYSCFGPFCFFDV-DGTESQ 554
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
GS S+ N DE +F LY + + V +I+PY+ Q+K L+ FR+
Sbjct: 555 PSGSGSWVNEDEVEFITLLYHQMAMRYPELK-SSSQVAVISPYRHQVKLLKDHFRSTFGD 613
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASN-HGVGFVADIRRMNVALTRARRALWVMGN 180
+ + + +NTVD FQG E++V+I SCVR + +GFV+D RRMNVA+TRAR A+ V+G+
Sbjct: 614 QSKEVIDVNTVDGFQGCEKEVVIFSCVRCNKEQKIGFVSDFRRMNVAITRARSAVLVVGS 673
Query: 181 AGALTQSDDWAALIADSKARNCYMDMDSLPKEFS 214
A L + W L+ +K R Y +PK F+
Sbjct: 674 ASTLKEDKHWNNLVESAKERGRYF---QVPKPFT 704
>gi|27764657|gb|AAO23082.1| putative component of a tRNA splicing complex [Oryza sativa
Japonica Group]
Length = 788
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/214 (39%), Positives = 121/214 (56%), Gaps = 8/214 (3%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
+L +QYRMHP I FPS+ FY+G L D E + ++ P+ FFDV G ES
Sbjct: 516 MLKIQYRMHPEISIFPSKEFYEGVLEDGEGLSK--KRPWHSYSCFGPFCFFDV-DGTESQ 572
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
GS S+ N DE +F LY + + V +I+PY+ Q+K L+ FR+
Sbjct: 573 PSGSGSWVNEDEVEFITLLYHQMAMRYPELK-SSSQVAVISPYRHQVKLLKDHFRSTFGD 631
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASN-HGVGFVADIRRMNVALTRARRALWVMGN 180
+ + + +NTVD FQG E++V+I SCVR + +GFV+D RRMNVA+TRAR A+ V+G+
Sbjct: 632 QSKEVIDVNTVDGFQGCEKEVVIFSCVRCNKEQKIGFVSDFRRMNVAITRARSAVLVVGS 691
Query: 181 AGALTQSDDWAALIADSKARNCYMDMDSLPKEFS 214
A L + W L+ +K R Y +PK F+
Sbjct: 692 ASTLKEDKHWNNLVESAKERGRYF---QVPKPFT 722
>gi|409079006|gb|EKM79368.1| hypothetical protein AGABI1DRAFT_91927 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1901
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/210 (40%), Positives = 125/210 (59%), Gaps = 6/210 (2%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LLS+QYRMHP I PS FYQGRL D S+ + ++K+ Y FF+V G E
Sbjct: 1577 LLSIQYRMHPEISQLPSSVFYQGRLNDGPSMAEKTAQPWHKNAHFGIYKFFNVSKGLEEM 1636
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTL-KSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
S+ +N+ E V L+ L++ + M VGI++ Y+ Q+ L+ +F
Sbjct: 1637 SRHSI--KNLAECHVAVALFNRLRREYGQDMSDIDYRVGIVSMYRAQIAELKRQFEQRFG 1694
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASN--HGVGFVADIRRMNVALTRARRALWVM 178
E + NTVD FQGQE+D+II+SCVRA VGF++D+RRMNVALTRA+ +L+++
Sbjct: 1695 KEILSRVDFNTVDGFQGQEKDIIILSCVRAGPGLQTVGFLSDVRRMNVALTRAKSSLYIL 1754
Query: 179 GNAGALTQSD-DWAALIADSKARNCYMDMD 207
GNA L +SD +W ++ D++ R+ ++ D
Sbjct: 1755 GNAATLERSDPNWRKIVGDARGRSRLVEAD 1784
>gi|222628875|gb|EEE61007.1| hypothetical protein OsJ_14822 [Oryza sativa Japonica Group]
Length = 344
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/214 (39%), Positives = 121/214 (56%), Gaps = 8/214 (3%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
+L +QYRMHP I FPS+ FY+G L D E + ++ P+ FFDV G ES
Sbjct: 72 MLKIQYRMHPEISIFPSKEFYEGVLEDGEGLSK--KRPWHSYSCFGPFCFFDV-DGTESQ 128
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
GS S+ N DE +F LY + + V +I+PY+ Q+K L+ FR+
Sbjct: 129 PSGSGSWVNEDEVEFITLLYHQMAMRYPELK-SSSQVAVISPYRHQVKLLKDHFRSTFGD 187
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRALWVMGN 180
+ + + +NTVD FQG E++V+I SCVR + +GFV+D RRMNVA+TRAR A+ V+G+
Sbjct: 188 QSKEVIDVNTVDGFQGCEKEVVIFSCVRCNKEQKIGFVSDFRRMNVAITRARSAVLVVGS 247
Query: 181 AGALTQSDDWAALIADSKARNCYMDMDSLPKEFS 214
A L + W L+ +K R Y +PK F+
Sbjct: 248 ASTLKEDKHWNNLVESAKERGRYF---QVPKPFT 278
>gi|328873818|gb|EGG22184.1| putative splicing endonuclease [Dictyostelium fasciculatum]
Length = 1947
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/227 (41%), Positives = 129/227 (56%), Gaps = 13/227 (5%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
+L+VQYRMHP I FPS+HFY G++ D +VI L + YKD P++F+D+ E
Sbjct: 1683 VLNVQYRMHPTISRFPSKHFYHGQIKDGHNVIALNHNI-YKDARFGPFIFYDITDSVEDS 1741
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
S S +NV EAK + L S K+++G+ITPYK Q Q E L S
Sbjct: 1742 NQSSHSLRNVHEAKLANLIISQLLVHF-SKDCEKLSIGVITPYKQQ----QIELSRRL-S 1795
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVMGN 180
+ +NTVD FQG+E+D+II SCVRA G +GF++D+RRMNV LTRA+ ++ V+G+
Sbjct: 1796 HFNSMVEVNTVDGFQGREKDIIIFSCVRAHKGGSIGFLSDVRRMNVGLTRAKLSMIVIGH 1855
Query: 181 AGALTQSDDWAALIADSK-ARNCYMDMDSLPKEFS----VALAAKAP 222
L + DW LI SK N Y + S E + V L +K P
Sbjct: 1856 TNLLMLNSDWGELIKFSKQVPNGYFPISSRSIEDNQLPIVPLVSKIP 1902
>gi|395331022|gb|EJF63404.1| hypothetical protein DICSQDRAFT_102653 [Dichomitus squalens LYAD-421
SS1]
Length = 1922
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/210 (41%), Positives = 120/210 (57%), Gaps = 5/210 (2%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LLS+QYRMHP I PS FY GRL+D + ++ P Y FF V G E +
Sbjct: 1579 LLSIQYRMHPDISQLPSNLFYDGRLSDGPEMAAKTKRPWHNHPKFGTYRFFSVESGTEEN 1638
Query: 62 RGGS-VSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
G+ S N EA+ V LY L K S VG+I+ Y+ Q+ L+ FR
Sbjct: 1639 MPGTGHSLVNRSEAQVAVALYNRLIKEFSSTDFD-FKVGVISMYRGQIVELKRAFRQRFG 1697
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRA--SNHGVGFVADIRRMNVALTRARRALWVM 178
E + NTVD FQGQE+D+II+SCVR+ S VGF+ D+RRMNVALTRA+ +L+V+
Sbjct: 1698 EEVLSTVDFNTVDGFQGQEKDIIILSCVRSGPSLQTVGFLRDVRRMNVALTRAKASLFVL 1757
Query: 179 GNAGALTQSDD-WAALIADSKARNCYMDMD 207
GNA L +SDD W ++ ++++R + D
Sbjct: 1758 GNAPTLERSDDIWRKIVDNARSRTSLIKAD 1787
>gi|301112122|ref|XP_002905140.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262095470|gb|EEY53522.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 1372
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/214 (41%), Positives = 127/214 (59%), Gaps = 13/214 (6%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKD-----PVLRPYVFFDVIH 56
+L QYR HP I DFP +FY G+L D + N+ + Y K P P VF++++
Sbjct: 971 MLRTQYRSHPMISDFPRNYFYGGKLQDGD---NVKGDEYAKPYHNLGPAFMPLVFWNLLS 1027
Query: 57 GRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGL-GKVTVGIITPYKLQLKCLQHEF 115
RE SVS NV EA+ V L+ L+ + + GKV G+ITPY Q+ L++ F
Sbjct: 1028 SREK-ATKSVSRMNVGEAELAVNLFLTLKNSCPPNAISGKV--GMITPYSQQMDELRNRF 1084
Query: 116 RNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRA-SNHGVGFVADIRRMNVALTRARRA 174
R+ L +++ INTVD FQG+E+D+II+S VRA GVGF+ DIRRMNVALTRA+ A
Sbjct: 1085 RHALGERYEQEVEINTVDGFQGREKDIIILSTVRADPKAGVGFLNDIRRMNVALTRAKFA 1144
Query: 175 LWVMGNAGALTQSDDWAALIADSKARNCYMDMDS 208
+V+G L S W+AL+ + +C + ++S
Sbjct: 1145 CYVIGKENTLRSSKPWSALLDHAYNHHCIVHVES 1178
>gi|19115031|ref|NP_594119.1| ATP-dependent 5' to 3' DNA/RNA helicase Sen1 [Schizosaccharomyces
pombe 972h-]
gi|2842700|sp|Q92355.1|SEN1_SCHPO RecName: Full=Helicase sen1
gi|1644322|emb|CAB03612.1| ATP-dependent 5' to 3' DNA/RNA helicase Sen1 [Schizosaccharomyces
pombe]
Length = 1687
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/204 (40%), Positives = 119/204 (58%), Gaps = 12/204 (5%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LLS+QYRMHP I FPS+ FY RL D +++ +V++ +P Y FDV G+E
Sbjct: 1440 LLSIQYRMHPDISHFPSKKFYDSRLEDGDNMAEKTQQVWHVNPKFTQYRLFDV-RGKE-R 1497
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
++S N++E ++ V + + L + +G+ITPY+ QL HE R
Sbjct: 1498 TSNTMSTYNLEEVEYLVNMVDELLNKFPDVNFTG-RIGVITPYRSQL----HELRRAFKV 1552
Query: 122 EEGKDLY----INTVDAFQGQERDVIIMSCVRA-SNHGVGFVADIRRMNVALTRARRALW 176
+ GK I TVD FQGQE+D+I SCV++ S HG+GF+ D RR+NVALTRAR +L
Sbjct: 1553 KYGKSFMSTIDIQTVDGFQGQEKDIIFFSCVKSYSKHGIGFLRDFRRLNVALTRARSSLL 1612
Query: 177 VMGNAGALTQSDDWAALIADSKAR 200
++GN L D W +L+ D+ +R
Sbjct: 1613 IIGNMETLKTDDLWGSLVDDALSR 1636
>gi|452846946|gb|EME48878.1| hypothetical protein DOTSEDRAFT_117955, partial [Dothistroma
septosporum NZE10]
Length = 1788
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/200 (41%), Positives = 119/200 (59%), Gaps = 5/200 (2%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL QYRMHP I FPS FY +L D ++ L + ++ +L PY FFDV +++
Sbjct: 1593 LLDTQYRMHPDISFFPSETFYDRKLMDGPNMAELRKQPWHASALLAPYRFFDVAGQQQT- 1651
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
+ S+ N+ E + LY+ ++ + +GIITPYK QL+ L+ F N
Sbjct: 1652 --SAKSFINLAEIDIAMLLYDRVRADFSELDWNN-KIGIITPYKSQLRELKRRFANKYGE 1708
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVMGN 180
+ NT DAFQG+E ++II SCVRAS G +GF+ DIRRMNV LTRA+ +LWV+GN
Sbjct: 1709 GIQDFIEFNTTDAFQGRECEIIIFSCVRASPAGGIGFLQDIRRMNVGLTRAKSSLWVLGN 1768
Query: 181 AGALTQSDDWAALIADSKAR 200
+ +L++ W L+ ++KAR
Sbjct: 1769 SESLSRGRYWKLLVDNAKAR 1788
>gi|330841718|ref|XP_003292839.1| hypothetical protein DICPUDRAFT_50668 [Dictyostelium purpureum]
gi|325076881|gb|EGC30633.1| hypothetical protein DICPUDRAFT_50668 [Dictyostelium purpureum]
Length = 938
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 87/214 (40%), Positives = 122/214 (57%), Gaps = 16/214 (7%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEV--YYKDPVLRPYVFFDVIHGRE 59
+L QYRMH IR FPS+HFY L D N+P Y+ +P L P VF+D+ E
Sbjct: 622 MLDTQYRMHSIIRKFPSKHFYDDLLQDGP---NIPSRAAHYHSNPFLGPLVFYDLSWSVE 678
Query: 60 SHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVL 119
+ GG S N++E K LY+H+ K +GII+PY+ Q+ L+ F+N
Sbjct: 679 TKPGGG-SVCNMEEIKMAYFLYQHIIKEYPEEDFSG-RIGIISPYRQQVLQLREAFKNY- 735
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRA---SNHGVGFVADIRRMNVALTRARRALW 176
+ I+TVD FQG+ER++II SCVRA G+GF++D+RRMNVALTR R +L
Sbjct: 736 -----PGVSIDTVDGFQGREREIIIFSCVRAPAEKGSGIGFLSDVRRMNVALTRPRCSLI 790
Query: 177 VMGNAGALTQSDDWAALIADSKARNCYMDMDSLP 210
+MGN AL+ + DW LI ++ C + + P
Sbjct: 791 IMGNVKALSVNKDWNDLIVHAQDLGCLVPVKQEP 824
>gi|392575976|gb|EIW69108.1| hypothetical protein TREMEDRAFT_31469 [Tremella mesenterica DSM 1558]
Length = 1969
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 82/210 (39%), Positives = 126/210 (60%), Gaps = 6/210 (2%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LLS+QYRMHP I PS+ FY G L D ++ V++++ PY FF+ I G E
Sbjct: 1730 LLSIQYRMHPDISRLPSKVFYHGALKDGPNMERNTKAVWHENKNYGPYRFFN-IEGSEIK 1788
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
G S +N +EA V +Y+HL++ + VGIIT Y+ Q+ ++ +F
Sbjct: 1789 AGTST--KNPEEAIAAVNIYKHLEEDFGDRTNLALRVGIITMYREQMYEIKRQFLQAFGG 1846
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASNH--GVGFVADIRRMNVALTRARRALWVMG 179
+ + NTVD FQGQE+D+II+SCVR+ + +GF+ D RRMNVALTRA+ +LW++G
Sbjct: 1847 SIMEMIEFNTVDGFQGQEKDIIILSCVRSGPNLRTIGFLRDERRMNVALTRAKSSLWIVG 1906
Query: 180 NAGALTQSDD-WAALIADSKARNCYMDMDS 208
N L +SD+ W ++ D++ R ++++ S
Sbjct: 1907 NGSTLERSDERWKVIVGDARERGFFLEVSS 1936
>gi|426195915|gb|EKV45844.1| hypothetical protein AGABI2DRAFT_72010 [Agaricus bisporus var.
bisporus H97]
Length = 1864
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 83/209 (39%), Positives = 125/209 (59%), Gaps = 6/209 (2%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LLS+QYRMHP I PS FYQGRL D S+ + ++K+ Y FF+V G E
Sbjct: 1604 LLSIQYRMHPEISQLPSSVFYQGRLNDGPSMAEKTAQPWHKNAHFGIYKFFNVSKGLEEM 1663
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTL-KSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
S+ +N+ E V L+ L++ + M VGI++ Y+ Q+ L+ +F
Sbjct: 1664 SRHSI--KNLAECHVAVALFNRLRREYGQDMSDIDYRVGIVSMYRAQIAELKRQFEQRFG 1721
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASN--HGVGFVADIRRMNVALTRARRALWVM 178
E + NTVD FQGQE+D+II+SCVRA VGF++D+RRMNVALTRA+ +L+++
Sbjct: 1722 KEILSRVDFNTVDGFQGQEKDIIILSCVRAGPGLQTVGFLSDVRRMNVALTRAKSSLYIL 1781
Query: 179 GNAGALTQSD-DWAALIADSKARNCYMDM 206
GNA L +SD +W ++ D++ R+ +++
Sbjct: 1782 GNAATLERSDPNWRRIVGDARGRSRLVEV 1810
>gi|321264612|ref|XP_003197023.1| hypothetical protein CGB_L2150W [Cryptococcus gattii WM276]
gi|317463501|gb|ADV25236.1| hypothetical protein CNBL1770 [Cryptococcus gattii WM276]
Length = 2184
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 87/226 (38%), Positives = 130/226 (57%), Gaps = 10/226 (4%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LLS+QYRMHP I + PS+ FY G+L D S+ ++++ + PY FF+ I G E
Sbjct: 1762 LLSIQYRMHPFISELPSKVFYHGQLKDGPSMAKKTAAIWHQRNIFGPYRFFN-IEGTEMK 1820
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
G S +N EA V LY L + + +G+I+ Y+ QL L+ +F S
Sbjct: 1821 TG--TSTKNPAEALAAVELYRRLNADFGTRVNLAMRIGVISMYREQLWELKRKFTEAFGS 1878
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRAS---NHGVGFVADIRRMNVALTRARRALWVM 178
+ + NTVD FQGQE+D+II+SCVR+ NH +GF+ D RRMNVALTRA+ +L++
Sbjct: 1879 TILELVEFNTVDGFQGQEKDIIILSCVRSGPNLNH-IGFLKDTRRMNVALTRAKSSLFIF 1937
Query: 179 GNAGALTQSDD-WAALIADSKARNCYMDMDSLPKEFSVALAAKAPG 223
GN L +SD+ W ++ D++ R +++ DS F+ A+ P
Sbjct: 1938 GNGPTLERSDERWKIIVQDARDRGFFINYDS--TTFNTAVLEPPPS 1981
>gi|448521196|ref|XP_003868449.1| Sen1 helicase [Candida orthopsilosis Co 90-125]
gi|380352789|emb|CCG25545.1| Sen1 helicase [Candida orthopsilosis]
Length = 1946
Score = 150 bits (379), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 84/203 (41%), Positives = 120/203 (59%), Gaps = 7/203 (3%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL+ QYRMHP I FPS FYQ +L D + ++ L PY FFD++ R
Sbjct: 1576 LLNTQYRMHPMISKFPSAEFYQSKLIDGPGMKEKNTRPWHLIDPLSPYRFFDIV-SRHEK 1634
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVT--VGIITPYKLQLKCLQHEFRNVL 119
+ S N +EA VCL + +QK + + + +GII+PYK Q++ ++ F
Sbjct: 1635 NELTRSLFNKEEA--NVCL-QLVQKMMTMVPQSDIAGKIGIISPYKEQIRTIKSVFERAY 1691
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVM 178
++ NTVD FQGQE+++IIMSCVRAS +G VGF++D+RRMNVALTRA LW++
Sbjct: 1692 GRLIFNEIDFNTVDGFQGQEKEIIIMSCVRASANGNVGFLSDVRRMNVALTRACTTLWIL 1751
Query: 179 GNAGALTQSDDWAALIADSKARN 201
GN +L + W L+ D++ RN
Sbjct: 1752 GNKTSLERDAVWKRLLEDAEKRN 1774
>gi|326482463|gb|EGE06473.1| tRNA-splicing endonuclease [Trichophyton equinum CBS 127.97]
Length = 2010
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/195 (43%), Positives = 116/195 (59%), Gaps = 4/195 (2%)
Query: 16 FPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESHRGGSVSYQNVDEAK 75
FPS+ FY G+L D + L + ++ +L PY FFDV G S S N+ E
Sbjct: 1463 FPSQAFYDGKLQDGPGMAPLRKKPWHGSELLGPYRFFDV-QGMHSSAAKGHSLINIAELT 1521
Query: 76 FGVCLYEHLQKTLKSMGL-GKVTVGIITPYKLQLKCLQHEFRNVLNSEEGKDLYINTVDA 134
+ LYE L ++ GK+ GIITPYK QL+ L+ F S + NT DA
Sbjct: 1522 VAMRLYERLLADYRNYDFAGKI--GIITPYKGQLRELKSRFAAKYGSSIFTTVEFNTTDA 1579
Query: 135 FQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGNAGALTQSDDWAALI 194
FQG+E +VII SCVRAS+ G+GF++DIRRMNV LTRA+ +LWV+GN+ +L + + W ALI
Sbjct: 1580 FQGRECEVIIFSCVRASDRGIGFLSDIRRMNVGLTRAKSSLWVLGNSQSLVRGEFWRALI 1639
Query: 195 ADSKARNCYMDMDSL 209
D++ R Y + D L
Sbjct: 1640 HDARERQLYTEGDIL 1654
>gi|281208036|gb|EFA82214.1| DNA2/NAM7 helicase family protein [Polysphondylium pallidum PN500]
Length = 864
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/205 (40%), Positives = 120/205 (58%), Gaps = 16/205 (7%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEV--YYKDPVLRPYVFFDVIHGRE 59
+L+ QYRMH IR FPS+HFY L D N+P Y+ +P P +F+D+ E
Sbjct: 582 MLTTQYRMHSSIRAFPSKHFYNDLLEDGP---NIPSRATNYHANPFFGPLIFYDLSFSVE 638
Query: 60 SHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVL 119
+ GG + N DE + + LY+ L KT L +GII+PY+ Q+ L+ F+N
Sbjct: 639 TKPGGGSVF-NEDECRMALQLYQLLLKTYPD-ELFSGRIGIISPYRQQVLSLREYFKNY- 695
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH---GVGFVADIRRMNVALTRARRALW 176
+ I+TVD FQG+ER++II SCVRA G+GF+AD+RRMNVALTR R +L
Sbjct: 696 -----SGISIDTVDGFQGREREIIIFSCVRAPAEKGAGIGFLADVRRMNVALTRPRSSLL 750
Query: 177 VMGNAGALTQSDDWAALIADSKARN 201
++GN+ +L + DW LI ++ N
Sbjct: 751 IIGNSKSLCINPDWYELIKHAQDNN 775
>gi|413933077|gb|AFW67628.1| hypothetical protein ZEAMMB73_310303 [Zea mays]
Length = 824
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/225 (37%), Positives = 124/225 (55%), Gaps = 15/225 (6%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
+L +QYRMHP I FPS+ FY+G L D E + ++ P+ FFDV G ES
Sbjct: 544 MLKIQYRMHPEISTFPSKEFYEGVLQDGEGLSR--KRPWHSYSCFGPFCFFDV-DGIESQ 600
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
GS S+ N DE +F LY L + VG+I+PY+ Q+K L+ FR+
Sbjct: 601 PSGSGSWVNQDEVEFITLLYHQLALRYPELK-SSPEVGVISPYRHQVKLLKDSFRSTFGD 659
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASN-HGVGFVADIRRMNVALTRARRALW---- 176
+ + + ++TVD FQG+E++++I SCVR + +GFV+D RRMNVA+TRA+ A+
Sbjct: 660 QSRELIDVSTVDGFQGREKEIVIFSCVRCNKEQKIGFVSDFRRMNVAITRAKSAVLKGRP 719
Query: 177 ---VMGNAGALTQSDDWAALIADSKARNCYMDMDSLPKEFSVALA 218
V+G+A L Q W L+ +K RNC +PK + A
Sbjct: 720 GVVVVGSASTLKQDKHWNNLVESAKERNCLF---KVPKPLTAFFA 761
>gi|392566307|gb|EIW59483.1| hypothetical protein TRAVEDRAFT_71533 [Trametes versicolor FP-101664
SS1]
Length = 1937
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/210 (40%), Positives = 121/210 (57%), Gaps = 5/210 (2%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LLS+QYRMHP I PS FY GRL D + + P Y FF+V G E
Sbjct: 1594 LLSIQYRMHPDISQLPSNLFYGGRLLDGPDMAEKTKRAWQTHPKFGTYRFFNVQAGVE-E 1652
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
G S N EA+ V LY L K S + VG+I+ Y+ Q+ L+ F+
Sbjct: 1653 SGAGHSLVNRAEAQVAVALYNRLCKEFSSANMD-FKVGVISMYRGQILELRRAFQQRFGE 1711
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASN--HGVGFVADIRRMNVALTRARRALWVMG 179
E + NTVD FQGQE+D+II+SCVRA VGF+ D+RRMNVALTRA+ +L+V+G
Sbjct: 1712 EVLSMVDFNTVDGFQGQEKDIIILSCVRAGPGVQTVGFLRDVRRMNVALTRAKASLFVLG 1771
Query: 180 NAGALTQSDD-WAALIADSKARNCYMDMDS 208
NA L +SD+ W ++ ++++R+ +++D+
Sbjct: 1772 NAPTLERSDETWRKIVENARSRSSLVNVDA 1801
>gi|358055281|dbj|GAA98737.1| hypothetical protein E5Q_05425 [Mixia osmundae IAM 14324]
Length = 1976
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/240 (36%), Positives = 138/240 (57%), Gaps = 10/240 (4%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LLS+QYRMHP I +PS FY G L D + L ++++P+L PY F +++
Sbjct: 1598 LLSIQYRMHPSISAWPSEVFYGGELRDGPGIAALTASSWHRNPLLPPYSFLHCSGAQQTG 1657
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMG--LGKVTVGIITPYKLQLKCLQHEFRNVL 119
R SV N +EA+ GV +++ LK +G + + VG++T YK Q+ L+ F+
Sbjct: 1658 RNHSVF--NPEEARVGVAIFKQF---LKEVGDAISDIRVGVVTMYKAQVFELRRLFKLAF 1712
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRAS--NHGVGFVADIRRMNVALTRARRALWV 177
+ L +TVD FQGQE+DVII SCVR+ + +GF+ D RRMNVALTRA+ +L++
Sbjct: 1713 GDDIVHRLDFSTVDGFQGQEKDVIIFSCVRSGQGSDPIGFLRDARRMNVALTRAKSSLFI 1772
Query: 178 MGNAGALTQSDDWAALIADSKARNCYMDMDSLPKEFSVALAAKAPGYGPLQGKIPHNARG 237
+G+A L W LI +++AR Y ++ + SV + A P P++ + ++ +G
Sbjct: 1773 LGHAPTLRTDPTWRRLIENAQARAMYREVTANTFTSSVMMPAVLPT-SPIKARSSNSQKG 1831
>gi|452824849|gb|EME31849.1| tRNA-splicing endonuclease positive effector-related protein
[Galdieria sulphuraria]
Length = 895
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/217 (41%), Positives = 129/217 (59%), Gaps = 14/217 (6%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKD---PVLRPYVFFDVIH 56
++L QYRMHP I FP+++FYQG L + SV N + + D P+L PY D+
Sbjct: 643 IMLDTQYRMHPAISLFPNQYFYQGLLKNDTSVCNDNRSHICHSDFLKPLLGPYAVIDISD 702
Query: 57 GRESHRGGSVSYQNVDEAKFGVCLYEHLQ------KTLKSMGLGKVTVGIITPYKLQLKC 110
G+E S S+ N EA +Y++ Q +T ++ K VGI+TPY+ QL
Sbjct: 703 GKEFRSSSSGSFYNEKEADIIARIYKYFQHKYLPKETNETNTPFKKRVGIVTPYRRQLLS 762
Query: 111 LQHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALT 169
L+ F S G + I++VDAFQG+E+D II+SCVR S G+GFV DIRRMNVA+T
Sbjct: 763 LRQAFEKHHISLRGVE--IDSVDAFQGREKDWIILSCVRCSFEKGIGFVRDIRRMNVAIT 820
Query: 170 RARRALWVMGNAGALT-QSDDWAALIADSKARNCYMD 205
RA+ +L ++GN AL+ S DW AL+ ++K R ++
Sbjct: 821 RAKYSLLIVGNMKALSHHSTDWFALVENAKQRGVLLN 857
>gi|145342493|ref|XP_001416216.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576441|gb|ABO94509.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 795
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 79/206 (38%), Positives = 126/206 (61%), Gaps = 7/206 (3%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL+VQYRMHP IR FPS FY L D+ + + D ++ +PY+ FD + G+E
Sbjct: 586 LLTVQYRMHPQIRMFPSSIFYSNALIDAPGLAKIRDLPSHRCWPFQPYMVFDAVDGQEI- 644
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
+ S S N EA F + L E + + V +++ Y+ Q + +Q N+L+
Sbjct: 645 QAASFSRYNQVEASFIIDLLEKYYQLFPLVDDSTQKVVVLSGYRKQCELIQ----NMLHQ 700
Query: 122 EE--GKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMG 179
+ G+ + ++T+DAFQGQE D++I+SCVR S + +GFV+D+RR+NVALTRA+ +LW++
Sbjct: 701 KPTLGQLISVSTIDAFQGQEGDLVILSCVRTSANDIGFVSDMRRLNVALTRAKSSLWIVC 760
Query: 180 NAGALTQSDDWAALIADSKARNCYMD 205
A+++ + W AL+ ++K R CY D
Sbjct: 761 KCEAVSKFNFWKALLKNAKERGCYTD 786
>gi|58270392|ref|XP_572352.1| hypothetical protein CNH01780 [Cryptococcus neoformans var.
neoformans JEC21]
gi|57228610|gb|AAW45045.1| hypothetical protein CNH01780 [Cryptococcus neoformans var.
neoformans JEC21]
Length = 2245
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 82/212 (38%), Positives = 124/212 (58%), Gaps = 6/212 (2%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LLS+QYRMHP I + PS+ FY G+L D S+ ++++ + PY FF+V G E
Sbjct: 1792 LLSIQYRMHPFISELPSKVFYHGQLKDGPSMAKKTAAIWHQRNIFGPYRFFNV-EGTEMK 1850
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
G S +N EA V LY L + + VG+I+ Y+ QL L+ +F S
Sbjct: 1851 TGTST--KNPAEALAAVELYRRLSADFGTRVNLAMRVGVISMYREQLWELKRKFTEAFGS 1908
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASNH--GVGFVADIRRMNVALTRARRALWVMG 179
+ + NTVD FQGQE+D+II+SCVR+ + +GF+ D RRMNVALTRA+ +L++ G
Sbjct: 1909 AILELVEFNTVDGFQGQEKDIIILSCVRSGPNLSHIGFLKDTRRMNVALTRAKSSLFIFG 1968
Query: 180 NAGALTQSDD-WAALIADSKARNCYMDMDSLP 210
N L +SD+ W ++ D++ R ++++ P
Sbjct: 1969 NGPTLERSDERWKIIVQDARDRGFFVNVGCFP 2000
>gi|134117856|ref|XP_772309.1| hypothetical protein CNBL1770 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50254922|gb|EAL17662.1| hypothetical protein CNBL1770 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 2245
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 82/212 (38%), Positives = 124/212 (58%), Gaps = 6/212 (2%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LLS+QYRMHP I + PS+ FY G+L D S+ ++++ + PY FF+V G E
Sbjct: 1792 LLSIQYRMHPFISELPSKVFYHGQLKDGPSMAKKTAAIWHQRNIFGPYRFFNV-EGTEMK 1850
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
G S +N EA V LY L + + VG+I+ Y+ QL L+ +F S
Sbjct: 1851 TGTST--KNPAEALAAVELYRRLSADFGTRVNLAMRVGVISMYREQLWELKRKFTEAFGS 1908
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASNH--GVGFVADIRRMNVALTRARRALWVMG 179
+ + NTVD FQGQE+D+II+SCVR+ + +GF+ D RRMNVALTRA+ +L++ G
Sbjct: 1909 AILELVEFNTVDGFQGQEKDIIILSCVRSGPNLSHIGFLKDTRRMNVALTRAKSSLFIFG 1968
Query: 180 NAGALTQSDD-WAALIADSKARNCYMDMDSLP 210
N L +SD+ W ++ D++ R ++++ P
Sbjct: 1969 NGPTLERSDERWKIIVQDARDRGFFVNVGCFP 2000
>gi|302766237|ref|XP_002966539.1| hypothetical protein SELMODRAFT_407541 [Selaginella moellendorffii]
gi|300165959|gb|EFJ32566.1| hypothetical protein SELMODRAFT_407541 [Selaginella moellendorffii]
Length = 1030
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 92/200 (46%), Positives = 126/200 (63%), Gaps = 21/200 (10%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRP--YVFFDVIHGRE 59
+L+ QYRMHP IR FPS H+Y G+L D +V++ P R FFD+ G+E
Sbjct: 616 MLTTQYRMHPEIRSFPSTHYYDGQLKDGSTVLHGNRSA----PFHRESHTGFFDIRDGQE 671
Query: 60 SHRGGSV-SYQNVDEAKFGVCLYEHL-QKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRN 117
R GS+ S N DEA+F L L ++ L+ + G++ G+ITPY+ Q K LQ R+
Sbjct: 672 --RPGSMQSLTNPDEAEFIFQLLRVLKERYLEEVRPGRI--GVITPYQEQRKVLQENMRS 727
Query: 118 VLNSEEGKDLYINTVDAFQGQERDVIIMSCVRAS----NHGVGFVADIRRMNVALTRARR 173
+ G D +NTVD+FQG+E D+I++S VRAS GVGF+AD+RRMNVALTRA+
Sbjct: 728 L---HSGID--VNTVDSFQGREADIIVLSTVRASFGDSQAGVGFLADVRRMNVALTRAKF 782
Query: 174 ALWVMGNAGALTQSDDWAAL 193
+LWV+GNA L ++ DW AL
Sbjct: 783 SLWVVGNARTLERNPDWKAL 802
>gi|307108218|gb|EFN56459.1| hypothetical protein CHLNCDRAFT_57676 [Chlorella variabilis]
Length = 670
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 81/199 (40%), Positives = 116/199 (58%), Gaps = 4/199 (2%)
Query: 6 QYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESHRGGS 65
QYRMHP IR+FPS +FY G L D V ++ P +P VF DV G ES GS
Sbjct: 390 QYRMHPAIREFPSLNFYGGGLRDGPGVAQDTRRPWHACPAFQPLVFIDV-KGTESVPSGS 448
Query: 66 VSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNSEEGK 125
S N EA+ + +Y L+ + + +V +I+PYK Q+ L+ FR L E K
Sbjct: 449 SSLVNEREAEMVLQMYRELRHRHPQLAT-QPSVAVISPYKAQVSLLRRLFRAALGEEAAK 507
Query: 126 DLYINTVDAFQGQERDVIIMSCVRAS--NHGVGFVADIRRMNVALTRARRALWVMGNAGA 183
+ INT+D FQG+E+D+ S VR+ + G+GFVAD RR+NV LTRAR +L V+G+ +
Sbjct: 508 MVDINTIDGFQGREKDIAFFSTVRSQRGSRGIGFVADERRINVGLTRARASLIVVGHVES 567
Query: 184 LTQSDDWAALIADSKARNC 202
L + W+AL++ ++ C
Sbjct: 568 LQSNPRWSALVSHARKSKC 586
>gi|331213013|ref|XP_003307776.1| hypothetical protein PGTG_00726 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309298179|gb|EFP74770.1| hypothetical protein PGTG_00726 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 2157
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 80/214 (37%), Positives = 119/214 (55%), Gaps = 9/214 (4%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKD-PVLRPYVFFDVIHGRES 60
LLS+QYRMHP I FPS+ FY +L D + + + +++ + PY F+ + RE
Sbjct: 1741 LLSIQYRMHPSISTFPSKAFYDSKLLDGPEMESKAVQPWHQSGSLFPPYAFYHPVGARE- 1799
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
RG S N EA V +Y + + VGIIT Y Q+ ++ + R
Sbjct: 1800 ERGAHHSLMNRTEASLAVSIYWRIANDYPHIDFA-YRVGIITGYAAQVGEIRRQLRAKFP 1858
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRA------SNHGVGFVADIRRMNVALTRARRA 174
+ + +NTVD FQGQE+D+II+SCVR S G+GF+ DIRRMNVALTRA+ +
Sbjct: 1859 ASTVAAIDVNTVDGFQGQEKDIIILSCVRGGRDDNNSGGGIGFLKDIRRMNVALTRAKSS 1918
Query: 175 LWVMGNAGALTQSDDWAALIADSKARNCYMDMDS 208
++++GN L+Q W AL+ D+ R+ ++ S
Sbjct: 1919 MFIIGNRAVLSQDPTWKALVEDAAGRSLISEVTS 1952
>gi|66821529|ref|XP_644230.1| DNA2/NAM7 helicase family protein [Dictyostelium discoideum AX4]
gi|75013564|sp|Q86AS0.1|Y4399_DICDI RecName: Full=Probable helicase DDB_G0274399
gi|60472139|gb|EAL70092.1| DNA2/NAM7 helicase family protein [Dictyostelium discoideum AX4]
Length = 967
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/202 (40%), Positives = 116/202 (57%), Gaps = 16/202 (7%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEV--YYKDPVLRPYVFFDVIHGRE 59
+L+ QYRMH IR FPSRHFYQ L D N+P Y+ +P P VF+D+ E
Sbjct: 651 MLTTQYRMHSLIRAFPSRHFYQDLLLDGP---NIPSRATHYHSNPFFGPLVFYDLSWSTE 707
Query: 60 SHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVL 119
+ GG + N E K + L++ K +GII+PY+ Q+ L+ F+N
Sbjct: 708 TKPGGGSVF-NEHECKMAMYLFQLFTKVYPDEDFAS-RIGIISPYRQQVLALREIFKNY- 764
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRA---SNHGVGFVADIRRMNVALTRARRALW 176
+ I+TVD FQG+ER++II SCVRA G+GF++D+RRMNVALTR R +L
Sbjct: 765 -----PGISIDTVDGFQGREREIIIFSCVRAPVEEGAGIGFLSDVRRMNVALTRPRSSLL 819
Query: 177 VMGNAGALTQSDDWAALIADSK 198
++GN AL+ + DW LI ++
Sbjct: 820 ILGNTKALSINKDWNELIQHTQ 841
>gi|402223041|gb|EJU03106.1| hypothetical protein DACRYDRAFT_115362 [Dacryopinax sp. DJM-731 SS1]
Length = 2132
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/231 (37%), Positives = 127/231 (54%), Gaps = 8/231 (3%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LLS+QYRMHP I S FY RL D + + ++ DP+ PY FFDV G+E+
Sbjct: 1658 LLSIQYRMHPEISALDSAMFYDNRLKDGPGMAEKTAQPWHADPLFSPYRFFDV-DGQETK 1716
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
S N EA + L+ ++ ++ +GI+T Y+ Q+ L+ FR+
Sbjct: 1717 ARAGHSLVNDAEASMILGLFGRIRAEFPAVNFD-YRIGIVTMYREQMFKLRRMFRDYYGE 1775
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRA--SNHGVGFVADIRRMNVALTRARRALWVMG 179
+ NTVD FQGQE+D+II+SCVRA + VGF+AD RR NVA+TRAR L++ G
Sbjct: 1776 HILTAVDFNTVDGFQGQEKDIIILSCVRAGPNQSSVGFLADRRRTNVAITRARSNLFIFG 1835
Query: 180 NAGALTQSDD-WAALIADSKARNCYMDMDSLP---KEFSVALAAKAPGYGP 226
NA L +SD W +++ +++ RN M +D + + A+A+ P P
Sbjct: 1836 NAATLERSDAIWKSIVQNAQERNVLMKVDQTTFRQRRSTPAIASTKPSASP 1886
>gi|449434252|ref|XP_004134910.1| PREDICTED: probable helicase MAGATAMA 3-like [Cucumis sativus]
Length = 841
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 120/212 (56%), Gaps = 12/212 (5%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
+L +QYRMHP IR FPSR FY L D++ V ++ P+ FFD+ G+ES
Sbjct: 556 MLKIQYRMHPEIRSFPSREFYAESLEDAQDVKLRTTRAWHAYRCYGPFCFFDLHEGKESQ 615
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
GS S+ N+DEA F + LY L + + V II+PY Q+K LQ +F ++
Sbjct: 616 PPGSGSWVNIDEADFVLHLYHKLVISYPELK-SNSQVAIISPYSQQVKLLQEKFVDLFGM 674
Query: 122 EEGKDLY-----INTVDAF-----QGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTR 170
+ L I ++A QG+E+D+ I SCVRAS N +GF++D RRMNV +TR
Sbjct: 675 DPSDPLRMLKLGILEMNALCLILLQGREKDIAIFSCVRASENRSIGFLSDCRRMNVGITR 734
Query: 171 ARRALWVMGNAGALTQSDDWAALIADSKARNC 202
AR ++ V+G+A L + + W L+ ++ R+C
Sbjct: 735 ARASILVVGSASTLKRDEHWNNLVESAQKRDC 766
>gi|403367086|gb|EJY83352.1| Splicing endonuclease positive effector sen1, putative [Oxytricha
trifallax]
Length = 1679
Score = 146 bits (369), Expect = 1e-32, Method: Composition-based stats.
Identities = 93/231 (40%), Positives = 129/231 (55%), Gaps = 33/231 (14%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-------LPDEVYYKDPVLRPYVFFDV 54
+LS+QYRMHP IR FPS FY+G L DSESVI LP + + + +FFD+
Sbjct: 1212 MLSIQYRMHPSIRQFPSNQFYEGGLKDSESVIQRQQDFSTLPVGLRVLNQTVSNLIFFDL 1271
Query: 55 IHGRESHRGGSVSYQNVDEAKFGVCLYEHL---------------------QKTLKSMGL 93
+G+ES S S N DEA+F + L++ + QK +G
Sbjct: 1272 KYGQESVNDTSKS--NKDEAQFILTLFQDIIKIILQKASQTDFPANVNSDDQKMKHILGD 1329
Query: 94 GKVTVGIITPYKLQLKCLQHEFRNVL--NSEEGKDLYINTVDAFQGQERDVIIMSCVRAS 151
+ VGII+PYK Q++ L+ L N + INTVDA+QG+E+D+II+SCVR S
Sbjct: 1330 LRQRVGIISPYKSQVRTLKDYMYPFLKKNGFPIDLIEINTVDAYQGREKDIIIISCVRGS 1389
Query: 152 NH-GVGFVADIRRMNVALTRARRALWVMGNAGALTQSDDWAALIADSKARN 201
+GF+ D RRMNVA+TRAR LWV+GN+ L ++ +W + SK N
Sbjct: 1390 QERQLGFLNDYRRMNVAVTRARHFLWVVGNSTTLNRNKNWNNFVEYSKTLN 1440
>gi|320580258|gb|EFW94481.1| DEAD-box type RNA helicase [Ogataea parapolymorpha DL-1]
Length = 968
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/198 (41%), Positives = 110/198 (55%), Gaps = 6/198 (3%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL+VQYRMHP I FPS+ FY +L D + ++ PY FF+ I G
Sbjct: 536 LLNVQYRMHPEISKFPSKEFYDSKLLDGSGMAEKTARPWHAIQEYGPYRFFN-IEGSHQQ 594
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTL-KSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
+ S N EAK + + L GK+ GII+PYK Q++C++ F
Sbjct: 595 NEQTKSLYNYAEAKIALEIVSDLFALFPDEQWPGKI--GIISPYKEQIRCIREVFVQKFG 652
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRA--SNHGVGFVADIRRMNVALTRARRALWVM 178
K++ NTVD FQGQE+D+++ SCVRA N GVGF+ D+RRMNVALTRAR +LWV+
Sbjct: 653 FPITKEIDFNTVDGFQGQEKDIVLFSCVRAGEQNSGVGFLGDVRRMNVALTRARSSLWVL 712
Query: 179 GNAGALTQSDDWAALIAD 196
G+ L + W LI D
Sbjct: 713 GSRETLMSNKTWRDLIDD 730
>gi|299472182|emb|CBN79685.1| Presumed helicase required for RNA polymerase II transcription
termination and processing of RNAs [Ectocarpus
siliculosus]
Length = 1201
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/251 (39%), Positives = 128/251 (50%), Gaps = 53/251 (21%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN---LPDEVYYKD--------PVLRPYV 50
+L+VQYRMHP IR FPS FY GRLTD+ V + +P + + P P++
Sbjct: 477 MLTVQYRMHPEIRAFPSARFYNGRLTDAPCVRDQAAIPAQSPSSETTALPPLGPCFPPFL 536
Query: 51 FFDVIHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKT-LKSMGL---------------- 93
DV G E R GS SYQN EA F L + L+S
Sbjct: 537 LVDVSSGSE-RRAGS-SYQNPREASFVSAFLARLVASGLRSGRGVKAGGGGGDGTAAGGG 594
Query: 94 ------GKVTVGIITPYKLQLKCLQHEFRNVLN-----------SEEGKDLYINTVDAFQ 136
G V VG+ITPY+ Q+ C+Q E + G D ++TVD FQ
Sbjct: 595 QDREKSGVVRVGVITPYRGQVHCIQQELSGGGGGGGGRRLKGGVEDGGVDAEVSTVDGFQ 654
Query: 137 GQERDVIIMSCVRASNH------GVGFVADIRRMNVALTRARRALWVMGNAGALTQSDDW 190
G+E DV++ SCVRA + G+GF+AD RRMNVALTRARR+L V+GN G L+ W
Sbjct: 655 GKEVDVVLFSCVRAPSSGGGGGGGIGFLADQRRMNVALTRARRSLVVLGNVGRLSSDGTW 714
Query: 191 AALIADSKARN 201
AL+ SK+R+
Sbjct: 715 KALVDHSKSRD 725
>gi|414591179|tpg|DAA41750.1| TPA: hypothetical protein ZEAMMB73_134729 [Zea mays]
Length = 1030
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/207 (37%), Positives = 121/207 (58%), Gaps = 4/207 (1%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDE-VYYKDPVLRPYVFFDVIHGRES 60
LL+VQYRMHP I FP FY G+L+D +V ++ E + V PY F +V GRE+
Sbjct: 777 LLNVQYRMHPEISRFPVATFYDGKLSDGPNVTSMSYERTFLASKVFGPYSFINVDGGRET 836
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
S +N E + + + L K S G K++VG+++PY Q++ + + N
Sbjct: 837 TEKHGTSLKNTVEVAAVLRIVQRLFKESVSTGC-KLSVGVVSPYNAQVRAICQKVGESYN 895
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVMG 179
+ +G + + +VD FQG E DV+I+S VR++ G VGF+ +++R NVALTRA+ LW++G
Sbjct: 896 AHDGFSVKVKSVDGFQGAEEDVLIISTVRSNGAGSVGFLTNLQRTNVALTRAKHCLWIVG 955
Query: 180 NAGALTQSDD-WAALIADSKARNCYMD 205
N L+ S W ++ D++ R CY +
Sbjct: 956 NGATLSSSKSVWQKIVKDARDRGCYFE 982
>gi|297841151|ref|XP_002888457.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297334298|gb|EFH64716.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 1058
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/209 (37%), Positives = 124/209 (59%), Gaps = 5/209 (2%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESV-INLPDEVYYKDPVLRPYVFFDVIHGRES 60
LL++QYRMHP I FP+R FY ++ D+ SV + ++ + + + PY F ++ +GRE
Sbjct: 628 LLNMQYRMHPSISIFPNREFYDMKILDAPSVRLRSYEKKFLPEKMFGPYSFINIAYGREQ 687
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
G S +NV E + L + G ++VG+I+PYK Q+ +Q + N
Sbjct: 688 F-GEGYSSKNVVEVSVVAEIVSKLYSVSRKTGRS-ISVGVISPYKAQVFAIQERIGEMYN 745
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVMG 179
+E + + +VD FQG E D+II+S VR++ G +GF+++ +R NVALTRAR LW++G
Sbjct: 746 TEGTFTVSVRSVDGFQGGEEDIIIISTVRSNGKGAIGFLSNQQRTNVALTRARYCLWILG 805
Query: 180 NAGALTQSDD-WAALIADSKARNCYMDMD 207
N LT + W L+ D++ARNC+ D +
Sbjct: 806 NEATLTNNKSVWRQLVVDAQARNCFHDAE 834
>gi|407035278|gb|EKE37635.1| tRNA splicing endonuclease, putative [Entamoeba nuttalli P19]
Length = 1159
Score = 145 bits (366), Expect = 3e-32, Method: Composition-based stats.
Identities = 82/195 (42%), Positives = 111/195 (56%), Gaps = 9/195 (4%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
+L +QYRMHP IR+FPS FY G L D LP + D P VF+D G E
Sbjct: 606 MLKIQYRMHPLIREFPSNQFYSGELIDGRDESILPCSI---DKGFGPVVFYDACGGLEER 662
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
G +++ N E + + L E L K K + +GI+TPY+ QL ++ L
Sbjct: 663 VGQTLA--NEVEVQIVIGLLEGLIK--KYPNCKEWDIGIVTPYRQQLLLIKMAIETSLLL 718
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASN--HGVGFVADIRRMNVALTRARRALWVMG 179
+E L +NT+D FQG+E D+II SCVR+S +GF++DIRRMNVALTRA+ ALWV+G
Sbjct: 719 KEMSKLCVNTIDGFQGREMDIIIFSCVRSSQIKPSIGFLSDIRRMNVALTRAKNALWVIG 778
Query: 180 NAGALTQSDDWAALI 194
N+ L + W I
Sbjct: 779 NSNTLCTNKTWKQYI 793
>gi|356577345|ref|XP_003556787.1| PREDICTED: uncharacterized protein LOC100781902 [Glycine max]
Length = 1636
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/244 (34%), Positives = 138/244 (56%), Gaps = 9/244 (3%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEV--YYKDPVLRPYVFFDVIHGRE 59
LL++Q+RMHP I FP+ +FY ++ D+ +V + D V Y P+ PY F +V G+E
Sbjct: 625 LLNMQHRMHPQISSFPNSYFYFNKIQDASNVERI-DYVKQYLPGPMFGPYSFINVFEGKE 683
Query: 60 SHRGGSVSYQNVDEAKFGVCLYEHLQKT-LKSMGLGKVTVGIITPYKLQLKCLQHEFRNV 118
SY+N+ E + + ++L K L S K+++GI++PY Q+ +Q + +
Sbjct: 684 QFDDAGRSYKNMAEVAVVMTILKNLFKAWLNSKH--KLSIGIVSPYVGQVVAIQEKLGQI 741
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWV 177
S +G ++ + ++D FQG E+DVII+S VR +N + F++ +R NVALTRAR LW+
Sbjct: 742 YESHDGFNVDVKSIDGFQGGEKDVIILSTVRTNNRTSLEFISSPQRTNVALTRARHCLWI 801
Query: 178 MGNAGALTQSDD-WAALIADSKARNCYMDMDSLPKEFSVALAAKAPGYGPLQGKIPHNAR 236
+GN AL +++ W A++ D+K R C+ D D KE A+ L + N+
Sbjct: 802 LGNERALASNENVWKAIVLDAKNRKCFFDADQ-DKELGKAILDAKKASNQLDDLLDTNSV 860
Query: 237 GLRS 240
+S
Sbjct: 861 LFKS 864
>gi|308807350|ref|XP_003080986.1| tRNA-splicing endonuclease positive effector-related (ISS)
[Ostreococcus tauri]
gi|116059447|emb|CAL55154.1| tRNA-splicing endonuclease positive effector-related (ISS)
[Ostreococcus tauri]
Length = 958
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/210 (39%), Positives = 121/210 (57%), Gaps = 10/210 (4%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
+L QYRMHP IR FPS FY L D + L ++K V RP+VFFDV G+E
Sbjct: 622 VLKTQYRMHPSIRVFPSMLFYDNELIDGPGLDKLTTRRWHKHSVFRPFVFFDV-KGKERA 680
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
G S+ N +E++F V L + L + G+ V +I+PYK Q++ ++ + L +
Sbjct: 681 SAGH-SWVNDEESEFIVALVQTLFARFPELIAGE-HVAVISPYKAQVRNIRRLIKEKLGA 738
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVG-------FVADIRRMNVALTRARRA 174
++ + +NT+D FQG E+D+ I S VRA G G FVAD RR+NV LTRAR +
Sbjct: 739 KKALRVDVNTIDGFQGHEKDICIFSVVRAPKRGAGSSGGGLGFVADERRINVGLTRARSS 798
Query: 175 LWVMGNAGALTQSDDWAALIADSKARNCYM 204
L+V+G A ++ D W +L+ ++ RNC +
Sbjct: 799 LFVVGAAESIKGDDRWGSLVESARRRNCAL 828
>gi|299115307|emb|CBN74123.1| SEN1 protein [Ectocarpus siliculosus]
Length = 1430
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 83/221 (37%), Positives = 120/221 (54%), Gaps = 20/221 (9%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLP-DEVYYKDPVLRPYVFFDVIHGRES 60
+L QYRMHP I F S FY G L + +V +V+++ P PY+F +V GR
Sbjct: 841 MLDTQYRMHPDIASFASTRFYSGLLRSAPTVTEASHGQVFHRLPRFAPYLFHNVSGGRLK 900
Query: 61 H----RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFR 116
GG+ S N E + L + L T +G+I PY+ Q++ LQ
Sbjct: 901 RGGEGYGGAKSLSNPTEVSYITSLLQDLITTFPGTDFNG-RIGVIAPYRNQIRALQRGMW 959
Query: 117 NVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASN------------HGVGFVADIRRM 164
+ +G + ++TVD FQG+E+D++I SCVRA G+GF+ D RR+
Sbjct: 960 STGLRHDG--VEVSTVDGFQGREKDIMIFSCVRAPELQRSGDSGSSSGGGIGFLDDWRRL 1017
Query: 165 NVALTRARRALWVMGNAGALTQSDDWAALIADSKARNCYMD 205
NVA+TRA+ A+W++G+AG L QS DW LI DSK RN ++D
Sbjct: 1018 NVAITRAKFAMWIVGHAGVLKQSTDWRELINDSKKRNAFID 1058
>gi|403415166|emb|CCM01866.1| predicted protein [Fibroporia radiculosa]
Length = 1926
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 92/276 (33%), Positives = 145/276 (52%), Gaps = 12/276 (4%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LLS+QYRMHP I PS+ FY +L D + ++ + L Y FFDV GRE
Sbjct: 1584 LLSIQYRMHPDISLVPSQLFYDRKLQDGPDMATKTKRPWHSNEKLGTYHFFDVAGGRE-E 1642
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
G + S+ N E + + L+ L++ + VGI++ Y+ Q+ L+ F +
Sbjct: 1643 AGRNHSFINRAECQVAIALFNRLRREYSTFDFD-YKVGIVSMYRGQIFELRRMFEQRFGA 1701
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRA--SNHGVGFVADIRRMNVALTRARRALWVMG 179
+ + +TVD FQGQE+DVII+SCVRA + VGF+ D+RRMNVALTRA+ +L+V+G
Sbjct: 1702 DISSIVDFHTVDGFQGQEKDVIILSCVRAGPNVQTVGFLRDMRRMNVALTRAKSSLFVLG 1761
Query: 180 NAGALTQSD-DWAALIADSKARNCYMDMDSLPKEFSVALAAKAPGYGPLQGKIPHNARGL 238
+A L +SD W +I+D++ R+ +++D F+ A P + P + P + +
Sbjct: 1762 HAATLERSDGTWRQIISDARERSRLVNVDV--SYFTTPTNATRPAHVPTKAPKPQSKKLP 1819
Query: 239 RSAGQRHRSFDM-----NMESRSGTPSEDDEKVSRN 269
++ N E + PS D ++ N
Sbjct: 1820 PLPPGLMPVHELNSRTDNTEPETTRPSGDQAQIVPN 1855
>gi|281211278|gb|EFA85443.1| Regulator of nonsense transcripts-like protein [Polysphondylium
pallidum PN500]
Length = 1412
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 86/201 (42%), Positives = 118/201 (58%), Gaps = 15/201 (7%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
+L QYRMHP I FPS FY +L D E+V + +Y DP P F+ + +E
Sbjct: 715 MLDTQYRMHPKISKFPSLQFYNSKLKDGENVAKYHNS-FYTDPKYGPINFYHIPDSQELK 773
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQK---TLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV 118
G+ S N E + L + L + +KSM +VGIITPYKLQ K LQ + +N
Sbjct: 774 TIGN-SIMNDLEIRLVFTLLKKLVQDHPEVKSM-----SVGIITPYKLQKKVLQ-DAKNH 826
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVM 178
N E D+ +NTVD FQG E+D+II SCVR+ +GF+ D RR+NV +TRARRAL+++
Sbjct: 827 FN--EKMDVVVNTVDGFQGAEKDIIIFSCVRS--EKIGFLKDTRRINVGITRARRALYIV 882
Query: 179 GNAGALTQSDDWAALIADSKA 199
G+A L Q +W A + D K+
Sbjct: 883 GSAKLLEQDPNWGAYLRDIKS 903
>gi|167390586|ref|XP_001739415.1| splicing endonuclease positive effector sen1 [Entamoeba dispar
SAW760]
gi|165896907|gb|EDR24206.1| splicing endonuclease positive effector sen1, putative [Entamoeba
dispar SAW760]
Length = 1156
Score = 144 bits (364), Expect = 6e-32, Method: Composition-based stats.
Identities = 82/208 (39%), Positives = 119/208 (57%), Gaps = 9/208 (4%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
+L +QYRMHP IR+FPS+ FY G L D LP + D P VF+D G E
Sbjct: 606 MLKIQYRMHPLIREFPSKQFYSGELIDGRDESILPCSI---DKGFGPVVFYDACGGLEER 662
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
G +++ N E + + L E L K K + +GI+TPY+ QL ++ +
Sbjct: 663 VGQTLA--NEVEVQIVIGLLEGLIK--KYPNCKEWDIGIVTPYRQQLLLIKIAIESSPLL 718
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASN--HGVGFVADIRRMNVALTRARRALWVMG 179
+E L +NT+D FQG+E D+II SCVR+S +GF++DIRRMNVALTRA+ ALWV+G
Sbjct: 719 KEMSKLCVNTIDGFQGREMDIIIFSCVRSSQIKPSIGFLSDIRRMNVALTRAKNALWVIG 778
Query: 180 NAGALTQSDDWAALIADSKARNCYMDMD 207
N+ L + W I K ++ ++++
Sbjct: 779 NSNTLCTNKTWKQYIEWLKEKDLIIEIN 806
>gi|393243189|gb|EJD50704.1| hypothetical protein AURDEDRAFT_83748 [Auricularia delicata TFB-10046
SS5]
Length = 2008
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 75/208 (36%), Positives = 116/208 (55%), Gaps = 4/208 (1%)
Query: 4 SVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESHRG 63
S+QYRMHP I PS+ FY G L D + ++ ++ +L Y FF++ G +
Sbjct: 1644 SIQYRMHPDISLIPSKLFYGGNLKDGPDMAAKTEQPWHASELLGTYRFFNIAQGHHENAA 1703
Query: 64 GSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNSEE 123
+S N E + LYE + +G+I+ YK Q+ LQ F ++
Sbjct: 1704 VGLSLVNRAEVDAALALYEAFLSQYSDQDMSH-RIGVISMYKAQINALQRAFEGRYGADI 1762
Query: 124 GKDLYINTVDAFQGQERDVIIMSCVRASNH--GVGFVADIRRMNVALTRARRALWVMGNA 181
L NTVD FQGQE+D+II+SCVRA +GFV D+RR+NV++TRAR +L+++G+A
Sbjct: 1763 KNKLDFNTVDGFQGQEKDIIILSCVRAGPRVTDIGFVKDVRRLNVSITRARSSLFILGHA 1822
Query: 182 GALTQSDD-WAALIADSKARNCYMDMDS 208
L + DD W ++ D++AR +D ++
Sbjct: 1823 ATLERGDDTWRQIVEDARARGFLVDAEA 1850
>gi|67484740|ref|XP_657590.1| tRNA splicing endonuclease [Entamoeba histolytica HM-1:IMSS]
gi|56474851|gb|EAL52205.1| tRNA splicing endonuclease, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449709011|gb|EMD48361.1| splicing endonuclease positive effector sen1, putative [Entamoeba
histolytica KU27]
Length = 1140
Score = 144 bits (363), Expect = 7e-32, Method: Composition-based stats.
Identities = 81/195 (41%), Positives = 111/195 (56%), Gaps = 9/195 (4%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
+L +QYRMHP IR+FPS FY G L D LP + D P VF+D G E
Sbjct: 606 MLKIQYRMHPLIREFPSNQFYSGELIDGRDESILPCSI---DKGFGPVVFYDACGGLEER 662
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
G +++ N E + + L E L K K + +GI+TPY+ QL ++ L
Sbjct: 663 VGQTLA--NEVEVQIVIGLLEGLIK--KYPNCKEWDIGIVTPYRQQLLLIKMAIETSLLL 718
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASN--HGVGFVADIRRMNVALTRARRALWVMG 179
++ L +NT+D FQG+E D+II SCVR+S +GF++DIRRMNVALTRA+ ALWV+G
Sbjct: 719 KDMSKLCVNTIDGFQGREMDIIIFSCVRSSQIKPSIGFLSDIRRMNVALTRAKNALWVIG 778
Query: 180 NAGALTQSDDWAALI 194
N+ L + W I
Sbjct: 779 NSNTLCTNKTWKQYI 793
>gi|294881038|ref|XP_002769213.1| splicing endonuclease positive effector sen1, putative [Perkinsus
marinus ATCC 50983]
gi|239872491|gb|EER01931.1| splicing endonuclease positive effector sen1, putative [Perkinsus
marinus ATCC 50983]
Length = 2247
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 91/231 (39%), Positives = 130/231 (56%), Gaps = 12/231 (5%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
++L+ QYRMHP I FPS+HFY G L S SV++ P + + P FFD+ E
Sbjct: 1859 VMLTTQYRMHPAIAAFPSKHFYHGALVPSNSVLSRPP---FAPHMPGPMTFFDLPDSEEV 1915
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTL--KSMGLGKVTVGIITPYKLQLKCLQHEFRNV 118
RG V N EA F L + L L K+ L +G+I+PYK Q+ L+
Sbjct: 1916 RRG--VGRSNPAEALFIGRLLQELISALGDKAKTLLPDGLGVISPYKQQVALLKRNLSYG 1973
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRALWV 177
S+E L + TVD+FQG+E+DVI++S VR+S + G+GFVAD+RR+NV++TRA+RALW+
Sbjct: 1974 SLSDEW--LEVGTVDSFQGREKDVIVVSTVRSSASSGIGFVADMRRLNVSITRAKRALWI 2031
Query: 178 MGNAGALTQ-SDDWAALIADSKARNCYMDMDSL-PKEFSVALAAKAPGYGP 226
+G++ L+ S +W L+ + N D L P L PG P
Sbjct: 2032 VGDSQRLSSGSTEWRDLVQHCQNTNVIRDASRLSPIHLRTLLREPIPGASP 2082
>gi|237841007|ref|XP_002369801.1| tRNA-splicing endonuclease positive effector protein, putative
[Toxoplasma gondii ME49]
gi|211967465|gb|EEB02661.1| tRNA-splicing endonuclease positive effector protein, putative
[Toxoplasma gondii ME49]
gi|221483688|gb|EEE22000.1| tRNA-splicing endonuclease positive effector, putative [Toxoplasma
gondii GT1]
gi|221504290|gb|EEE29965.1| tRNA-splicing endonuclease positive effector, putative [Toxoplasma
gondii VEG]
Length = 1193
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 117/211 (55%), Gaps = 24/211 (11%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINL--PDEVYYKDPVLRPYVFFDVIHGRE 59
+LSVQYRMHP I F S FYQ +L D+E+++ L P +Y P+ +P VFF +
Sbjct: 906 MLSVQYRMHPCISKFASSTFYQNQLQDAENIVGLVRPPIPWYSIPIFKPLVFFAI---NT 962
Query: 60 SHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGL----GKVTVGIITPYKLQLKCLQHEF 115
SH + S NVDEA F L + L++ ++G GK+ II+PY Q+ L+
Sbjct: 963 SHTEENTSLINVDEANFVCQLVDLLKRIFVALGRTDWEGKL--AIISPYAQQVSLLRQRI 1020
Query: 116 RNVLNSEEGK--DLYINTVDAFQGQERDVIIMSCVRAS-----------NHGVGFVADIR 162
+ L + K + +NTVD FQGQE+D+II S VRA N +GF+AD R
Sbjct: 1021 KAQLRITDNKACPIDVNTVDGFQGQEKDLIIFSAVRAQYTNPTTAQTKLNTSIGFLADER 1080
Query: 163 RMNVALTRARRALWVMGNAGALTQSDDWAAL 193
R+NVALTR R LW++GN L + W L
Sbjct: 1081 RINVALTRGRTNLWIVGNGRFLMSNHHWRCL 1111
>gi|356518854|ref|XP_003528092.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent helicase NAM7-like
[Glycine max]
Length = 514
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 134/225 (59%), Gaps = 20/225 (8%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVI-NLPDEVYYKDPVLRPYVFFDVIHGRES 60
LL++QYRMHP IR FP+ FY ++ D+++V N + Y P+ F ++I G+E
Sbjct: 249 LLNMQYRMHPQIRSFPNSFFYFNQIQDAQNVERNDYGKHYLPGPMFGXLSFINIIRGKEK 308
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLG--------------KVTVGIITPYKL 106
SY+N+ E V + ++L K++ ++ G ++++GI++PY
Sbjct: 309 FEAAGRSYKNMAEVAIIVTILKNLHKSM-TVPFGTTDIFSLPWLTSKERLSIGIMSPYAG 367
Query: 107 QLKCLQHEFRNVLN--SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRR 163
Q+ +Q + + + +G ++ + ++D FQG E+DVII+S VR +N + F+A ++R
Sbjct: 368 QVTAIQENLGKMYDRHNHDGFNVNVKSIDGFQGGEQDVIILSTVRTNNRASLEFIASLQR 427
Query: 164 MNVALTRARRALWVMGNAGALTQSDD-WAALIADSKARNCYMDMD 207
NVALTRAR LW++GN ALT +++ W A++ D+K+R C+ ++D
Sbjct: 428 TNVALTRARHCLWILGNERALTSNENVWKAIVLDAKSRKCFFNVD 472
>gi|162606520|ref|XP_001713290.1| hypothetical protein GTHECHR2082 [Guillardia theta]
gi|12580756|emb|CAC27074.1| sen1 [Guillardia theta]
Length = 692
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/207 (38%), Positives = 124/207 (59%), Gaps = 11/207 (5%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
+ L +QYRMHP I FP+R FY+ L DS V + + +++ P +FFD+I G E+
Sbjct: 449 LFLGIQYRMHPQISSFPARKFYKNNLKDSWKVSKISN--FHQLRCFSPLIFFDIIDGVEN 506
Query: 61 -HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVL 119
H S+ N+DE +F + LY L S L ++T+G I+ Y Q++ E R++L
Sbjct: 507 YHTDNHFSWCNLDEIRF-INLYFRSIICLIS-NLNELTIGFISGYSGQIE----EMRDIL 560
Query: 120 -NSEEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRALWV 177
NS+ + I+T+D+FQG+E+D++ SCVR+ G+GF+AD RR+NVA TRA+ W+
Sbjct: 561 SNSKIKLNEQISTIDSFQGKEKDILFFSCVRSKIERGIGFLADGRRINVAFTRAKLGFWI 620
Query: 178 MGNAGALTQSDDWAALIADSKARNCYM 204
GN+ +L + +W + D K RN Y
Sbjct: 621 FGNSFSLRKDSNWNETVFDFKIRNNYF 647
>gi|268637806|ref|XP_002649136.1| hypothetical protein DDB_G0285243 [Dictyostelium discoideum AX4]
gi|256012898|gb|EEU04084.1| hypothetical protein DDB_G0285243 [Dictyostelium discoideum AX4]
Length = 2069
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 118/211 (55%), Gaps = 13/211 (6%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLR--PYVFFDVIHGRE 59
+L QYRMHP I FPS+ FY+G L D ++V + YY D R P VF+D+
Sbjct: 1674 VLKTQYRMHPMISKFPSKIFYRGELEDGKNVREYKQD-YYNDSASRFGPLVFYDLFDKHG 1732
Query: 60 SHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVL 119
R S +N E K + + L + + +G+ITPYK Q L + F+
Sbjct: 1733 EVRSSFFSLRNPTEVKLAKLIVDQLISNYPNTK--DLEIGVITPYKSQSVDLFNAFKGYQ 1790
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRA-SNHGVGFVADIRRMNVALTRARRALWVM 178
N E ++T+D FQG+E+D +I S VRA S H +GF++DIRRMNV LTRA+ ++ ++
Sbjct: 1791 NVE------VSTIDGFQGKEKDFVIFSSVRAHSGHSIGFLSDIRRMNVGLTRAKYSMVIL 1844
Query: 179 GNAGALTQSDDWAALIAD-SKARNCYMDMDS 208
GN+ L+ +DDW L+ D + NCY + S
Sbjct: 1845 GNSSLLSNNDDWGNLVNDLRQTNNCYFPISS 1875
>gi|145494398|ref|XP_001433193.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400310|emb|CAK65796.1| unnamed protein product [Paramecium tetraurelia]
Length = 1493
Score = 143 bits (361), Expect = 1e-31, Method: Composition-based stats.
Identities = 87/228 (38%), Positives = 132/228 (57%), Gaps = 30/228 (13%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN--LPDEVYYKDPVLRPYVFFDVIHGRE 59
L +QYRMH IR FPS +FYQ +L D ES N LP ++K+ VL F D++ G+E
Sbjct: 1120 FLDIQYRMHSEIRMFPSEYFYQNKLKDHESTNNRDLPTN-FFKNRVL----FLDILDGQE 1174
Query: 60 SHRGGSVSYQNVDEAKFGV------CLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH 113
G S N++E + + C+ E T+G+I YK Q++ ++
Sbjct: 1175 QKDGTS----NINEQEASIIVNSIKCIKEEFPTQ---------TIGVICAYKSQVRYIKT 1221
Query: 114 EFRNVLNSEEGKD---LYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALT 169
+ + E D + INTVD+FQGQE+D+I+ SCVR+S G +GF+ D RRMNVALT
Sbjct: 1222 LLKQKYSDESLFDHSTISINTVDSFQGQEKDIILFSCVRSSQTGGIGFLNDGRRMNVALT 1281
Query: 170 RARRALWVMGNAGALTQSDDWAALIADSKARNCYMDMDSLPKEFSVAL 217
RA+ AL+++GNA L++SD W +++ + + R Y +++S +F L
Sbjct: 1282 RAKNALFILGNAITLSKSDLWKSMLKNIQKRGLYRNLESQQFQFQQIL 1329
>gi|401399876|ref|XP_003880657.1| hypothetical protein NCLIV_010920 [Neospora caninum Liverpool]
gi|325115068|emb|CBZ50624.1| hypothetical protein NCLIV_010920 [Neospora caninum Liverpool]
Length = 1244
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 117/211 (55%), Gaps = 24/211 (11%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINL--PDEVYYKDPVLRPYVFFDVIHGRE 59
+LSVQYRMHP I F S FYQ +L D+E+++ L P +Y P+ +P VFF +
Sbjct: 957 MLSVQYRMHPCISKFASSTFYQNQLQDAENIVGLVRPPIPWYSIPIFKPLVFFAI---NT 1013
Query: 60 SHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGL----GKVTVGIITPYKLQLKCLQHEF 115
SH + S NVDEA F L + L++ ++G GKV V I+PY Q+ L+
Sbjct: 1014 SHTEENTSLVNVDEANFVCQLVDLLKRIFVALGQTDWEGKVAV--ISPYAQQVSLLRQRI 1071
Query: 116 RNVLNSEEGKD--LYINTVDAFQGQERDVIIMSCVRAS-----------NHGVGFVADIR 162
+ L + K + +NTVD FQGQE+D+II S VRA + +GF+AD R
Sbjct: 1072 KAQLRITDNKPCPIDVNTVDGFQGQEKDLIIFSAVRAQYTSPTTAATKLDTSIGFLADER 1131
Query: 163 RMNVALTRARRALWVMGNAGALTQSDDWAAL 193
R+NVALTR R LW++GN L + W L
Sbjct: 1132 RINVALTRGRTNLWIVGNGRFLMSNHHWRCL 1162
>gi|145509537|ref|XP_001440707.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124407935|emb|CAK73310.1| unnamed protein product [Paramecium tetraurelia]
Length = 1517
Score = 143 bits (360), Expect = 2e-31, Method: Composition-based stats.
Identities = 88/222 (39%), Positives = 133/222 (59%), Gaps = 18/222 (8%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESV--INLPDEVYYKDPVLRPYVFFDVIHGRE 59
L +QYRMH IR FPS +FYQ +L D ES NLP + ++K+ VL F D++ G+E
Sbjct: 1148 FLDIQYRMHSEIRMFPSEYFYQNKLKDHESTNTRNLPSK-FFKNRVL----FLDILDGQE 1202
Query: 60 SHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVL 119
G S N++E + V + L K++K T+G+I YK Q++ ++ +
Sbjct: 1203 QKDGTS----NINEQEAIVIV--QLIKSIKEE-FPTQTIGVICAYKSQVRYIKTLLKQKF 1255
Query: 120 NSEEGKD---LYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRAL 175
E D + INTVD+FQGQE D+I+ SCVR+S G +GF+ D RRMNVALTRA+ AL
Sbjct: 1256 QDENIFDENTISINTVDSFQGQEEDIILFSCVRSSQTGGIGFLNDGRRMNVALTRAKNAL 1315
Query: 176 WVMGNAGALTQSDDWAALIADSKARNCYMDMDSLPKEFSVAL 217
+++GNA L++S+ W +++ + + R Y ++S +F L
Sbjct: 1316 FILGNAITLSKSNLWRSMLKNIQQRKLYRRIESYNFQFEQIL 1357
>gi|9758526|dbj|BAB08973.1| unnamed protein product [Arabidopsis thaliana]
Length = 536
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/212 (40%), Positives = 127/212 (59%), Gaps = 13/212 (6%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYK----DPVLRPYVFFDVIHG 57
LL VQYRMHP I FP + FY GR+ D+ N+ + +Y K + + F +V G
Sbjct: 314 LLDVQYRMHPSISRFPYKEFYGGRIKDAA---NVQESIYQKRFLQGNMFGSFSFINVGRG 370
Query: 58 RESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRN 117
+E G S +N+ E + +L K + + K++VG+ITPYK Q++ +Q R+
Sbjct: 371 KEEFGDGD-SPKNMVEVAVVSEIISNLFKVSRERKM-KMSVGVITPYKGQVRAIQERIRD 428
Query: 118 VLNSEEGKDLYIN--TVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRA 174
+S G+ +N +VD FQG E D+II+S VR++++G VGF+++ +R NVALTRAR
Sbjct: 429 KYSSLSGELFTVNVRSVDGFQGGEEDIIIISTVRSNSNGKVGFLSNRQRANVALTRARHC 488
Query: 175 LWVMGNAGALTQSDD-WAALIADSKARNCYMD 205
LWV+GN L +S WA LI+DSK R C+ D
Sbjct: 489 LWVIGNESTLARSGSIWANLISDSKRRKCFYD 520
>gi|328770910|gb|EGF80951.1| hypothetical protein BATDEDRAFT_24512 [Batrachochytrium dendrobatidis
JAM81]
Length = 1938
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/215 (38%), Positives = 123/215 (57%), Gaps = 15/215 (6%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LLS+QYRMHPHI FPS +FY L D+ + + ++ + PY+ + + G+E
Sbjct: 1643 LLSIQYRMHPHISLFPSLNFYNSALKDAPGLNTICSAPWHSHRLFPPYLLLNAVSGQEQF 1702
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEF-----R 116
G S N +EA V L + + + +GIIT YKLQ + L+ F
Sbjct: 1703 -GSRKSLFNHEEASLCVGLVKTICTNFPDIKFF-ARIGIITFYKLQARKLRDMFVKHFGH 1760
Query: 117 NVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRAS---NHGVGFVADIRRMNVALTRARR 173
+LNS + INTVD FQGQE+D+I++SCVRAS + VGF++D RRMNVALTRA+
Sbjct: 1761 AILNSVD-----INTVDGFQGQEKDIILLSCVRASKDTDRSVGFISDTRRMNVALTRAKH 1815
Query: 174 ALWVMGNAGALTQSDDWAALIADSKARNCYMDMDS 208
+L ++GN+ +L W L+ ++K R+ + + S
Sbjct: 1816 SLIIIGNSHSLKTDPVWKNLVNNAKQRSLTLKISS 1850
>gi|15239483|ref|NP_198519.1| tRNA-splicing endonuclease positive effector-related protein
[Arabidopsis thaliana]
gi|332006756|gb|AED94139.1| tRNA-splicing endonuclease positive effector-related protein
[Arabidopsis thaliana]
Length = 638
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/212 (40%), Positives = 127/212 (59%), Gaps = 13/212 (6%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYK----DPVLRPYVFFDVIHG 57
LL VQYRMHP I FP + FY GR+ D+ N+ + +Y K + + F +V G
Sbjct: 416 LLDVQYRMHPSISRFPYKEFYGGRIKDAA---NVQESIYQKRFLQGNMFGSFSFINVGRG 472
Query: 58 RESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRN 117
+E G S +N+ E + +L K + + K++VG+ITPYK Q++ +Q R+
Sbjct: 473 KEEFGDGD-SPKNMVEVAVVSEIISNLFKVSRERKM-KMSVGVITPYKGQVRAIQERIRD 530
Query: 118 VLNSEEGKDLYIN--TVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRA 174
+S G+ +N +VD FQG E D+II+S VR++++G VGF+++ +R NVALTRAR
Sbjct: 531 KYSSLSGELFTVNVRSVDGFQGGEEDIIIISTVRSNSNGKVGFLSNRQRANVALTRARHC 590
Query: 175 LWVMGNAGALTQSDD-WAALIADSKARNCYMD 205
LWV+GN L +S WA LI+DSK R C+ D
Sbjct: 591 LWVIGNESTLARSGSIWANLISDSKRRKCFYD 622
>gi|353238887|emb|CCA70818.1| related to SEN1 protein [Piriformospora indica DSM 11827]
Length = 1917
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/208 (39%), Positives = 120/208 (57%), Gaps = 6/208 (2%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LLS+QYRMHP I PS FY+ +L D + ++ D L Y FD I G E
Sbjct: 1588 LLSIQYRMHPEISRLPSVLFYERKLQDGPDMAVKTRRPWHDDSNLGVYRLFD-IRGNEEQ 1646
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
S N+ E K + LY+ L TL++ +VT+GII+ Y+ QL L+ F
Sbjct: 1647 ADLGYSQYNLAEVKAALELYKRLSATLRTPT--EVTIGIISMYRAQLTKLRDAFIARYGR 1704
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASNH--GVGFVADIRRMNVALTRARRALWVMG 179
E + NTVD FQGQE+DVII+SCVRA + +GF++D RR+NVA+TR R +L+++G
Sbjct: 1705 EILSKVDFNTVDGFQGQEKDVIILSCVRAGPNVSSIGFLSDARRINVAITRCRSSLFILG 1764
Query: 180 NAGALTQSDD-WAALIADSKARNCYMDM 206
+A L +SD W+ +I D+ +R + +
Sbjct: 1765 DAATLRRSDQLWSKIIEDANSRGSLLQV 1792
>gi|328866781|gb|EGG15164.1| Regulator of nonsense transcripts 1 like protein [Dictyostelium
fasciculatum]
Length = 1358
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/178 (43%), Positives = 113/178 (63%), Gaps = 9/178 (5%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
+L QYRMHP I FPS+ FYQ +L D E+V+ + +Y + P F+++ +E
Sbjct: 683 MLDTQYRMHPSISKFPSQRFYQSKLKDGENVVKYTNS-FYNNAKYGPINFYNIPESQEVS 741
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
G+ S +N+ E+K+ L + L + + K++VGIITPYKLQ K L E R N
Sbjct: 742 ENGN-SLKNILESKYVFVLLKKLVQEYPEV--KKMSVGIITPYKLQKKELL-EARGAFN- 796
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMG 179
E D+ +NTVD FQG E+D+II SCVR N +GF++DIRR+NV +TRAR+A++V+G
Sbjct: 797 -EKMDVVVNTVDGFQGAEKDIIIFSCVR--NKRIGFLSDIRRINVGITRARKAIYVVG 851
>gi|224099651|ref|XP_002311566.1| predicted protein [Populus trichocarpa]
gi|222851386|gb|EEE88933.1| predicted protein [Populus trichocarpa]
Length = 1950
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/243 (34%), Positives = 132/243 (54%), Gaps = 7/243 (2%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYY-KDPVLRPYVFFDVIHGRES 60
LL +QYRMHP I FP+ FY ++ D+ +V E +Y P+ PY F +V GRE
Sbjct: 487 LLDMQYRMHPSISCFPNSKFYFSQILDAPNVKARSYEKHYLPGPMFGPYTFINVFGGREE 546
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
S +N+ E + L L K KV VG+I+PY Q+ +Q +
Sbjct: 547 LDDVGHSRKNMVEVAIVLKLLRSLYKAWSGQ---KVRVGVISPYTAQVGAIQEKLGKKYE 603
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVMG 179
+ +G + ++++D FQG E D++I+S VR++ G +GF++D RR+NVALTRAR LW++G
Sbjct: 604 TIDGFSVKVSSIDGFQGGEEDIVIISTVRSNTGGAIGFMSDPRRINVALTRARHCLWILG 663
Query: 180 NAGALTQSDD-WAALIADSKARNCYMDMDSLPKEFSVALAAKAPGYGPLQGKIPHNARGL 238
N L+ S+ W L+ D+K R+C+ D K+ + A+ + L I ++
Sbjct: 664 NERTLSNSESIWEKLVHDAKERSCFFHADE-DKDLAKAILEVKKEFDQLDDLIKGDSALF 722
Query: 239 RSA 241
RSA
Sbjct: 723 RSA 725
>gi|281211277|gb|EFA85442.1| adenylyl cyclase [Polysphondylium pallidum PN500]
Length = 1439
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 124/211 (58%), Gaps = 16/211 (7%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
+L QYRMHP I FPS FY +L D E+V+ + +Y DP P F+ + +E
Sbjct: 712 MLDTQYRMHPKISKFPSNQFYSAKLKDGENVVKY-NNSFYTDPKYGPINFYHIPDSQELK 770
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQK---TLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV 118
G S +N E + L + L + +KSM +VGIITPYKLQ K LQ + ++
Sbjct: 771 TIGK-SIKNSLEIRLVFTLLKKLVQDHPEVKSM-----SVGIITPYKLQKKELQ-DAKSH 823
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVM 178
N E D+ +NTVD FQG E+D+II SCVR+ +GF+ D RR+NV +TRARRAL+++
Sbjct: 824 FN--EKMDVVVNTVDGFQGAEKDIIIFSCVRS--EKIGFLKDTRRINVGITRARRALYIV 879
Query: 179 GNAGALTQSDDWAALIADSKAR-NCYMDMDS 208
G++ L Q +W A + + K+ ++ +DS
Sbjct: 880 GSSKLLEQDPNWGAYLRNIKSTVKKFISIDS 910
>gi|328871485|gb|EGG19855.1| hypothetical protein DFA_06958 [Dictyostelium fasciculatum]
Length = 1406
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/178 (43%), Positives = 112/178 (62%), Gaps = 9/178 (5%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
+L QYRMHP I FPS+ FYQ +L D E+V+ + +Y + P F+++ +E
Sbjct: 731 MLDTQYRMHPSISKFPSQRFYQSKLKDGENVVKYTNS-FYNNAKYGPINFYNIPESQEVS 789
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
G+ S +N+ E+K+ L + L + + K+ VGIITPYKLQ K L E R N
Sbjct: 790 ENGN-SLKNILESKYVFVLLKKLVQEYPEV--KKMIVGIITPYKLQKKELL-EARGAFN- 844
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMG 179
E D+ +NTVD FQG E+D+II SCVR N +GF++DIRR+NV +TRAR+A++V+G
Sbjct: 845 -EKMDVVVNTVDGFQGAEKDIIIFSCVR--NKRIGFLSDIRRINVGITRARKAIYVVG 899
>gi|308800562|ref|XP_003075062.1| Sen1 Sen1-related helicase (IC) [Ostreococcus tauri]
gi|119358871|emb|CAL52334.2| Sen1 Sen1-related helicase (IC) [Ostreococcus tauri]
Length = 799
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 79/210 (37%), Positives = 118/210 (56%), Gaps = 20/210 (9%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN---LPDEVYYKDPVLRPYVFFDVIHGR 58
LLS+QYRMHP IR FPS FY G L D+ + LP Y+ +P++ FDV+ G+
Sbjct: 575 LLSIQYRMHPEIRCFPSCVFYSGALVDAPKLDQSRYLPAHKYWP---FKPFMVFDVVQGQ 631
Query: 59 ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCL-----QH 113
E R ++S N +EA F V L ++ + +++ Y+ Q + Q
Sbjct: 632 E-ERASTLSRYNKNEAVFIVDLLVRYLTLFPLTRKSRLDIMVLSGYREQCTLVHRLLQQT 690
Query: 114 EFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARR 173
N +N ++T+DAFQGQE DVI++SCVR S +GF+AD+RR+NVA+TRAR
Sbjct: 691 SIVNCVN--------VSTIDAFQGQESDVIVLSCVRTSATDIGFLADLRRLNVAITRARC 742
Query: 174 ALWVMGNAGALTQSDDWAALIADSKARNCY 203
+LWV+ +++ W L+ ++K R CY
Sbjct: 743 SLWVICKCETVSKFHIWQLLLKNAKERGCY 772
>gi|403367834|gb|EJY83741.1| Splicing endonuclease positive effector sen1, putative [Oxytricha
trifallax]
Length = 1199
Score = 141 bits (356), Expect = 5e-31, Method: Composition-based stats.
Identities = 101/333 (30%), Positives = 162/333 (48%), Gaps = 34/333 (10%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN--LPDEVYYKDPVLRPYVFFDVIHGRE 59
+L +QYRMHP IR +PS+ FY+ R+TD +++ +P + P VFFD+I+ +E
Sbjct: 828 MLQIQYRMHPVIRQYPSQTFYENRITDDKTISTREIPPVIESIKTYFTPSVFFDLINSQE 887
Query: 60 SHRGGSVSYQNVDEAKFGVCLYEHL-----------QKTLKSMGLGKVTVGIITPYKLQL 108
+ S N +EA+F + L + L Q+ S K +GIITPYK Q+
Sbjct: 888 TL--AETSKSNNEEAQFTLNLIQLLKEISNQSKSAAQQKSNSFDFLKNKIGIITPYKSQV 945
Query: 109 KCLQHEFRNVLNS--EEGKDLYINTVDAFQGQERDVIIMSCVRASN-----HGVGFVADI 161
K L+ + L S +D+ INTVDA+QG+E+D+II +CVR+++ + +GF+ D
Sbjct: 946 KILKDQIAPWLRSIGSRLQDIEINTVDAYQGREKDIIIFNCVRSNSSNQLKNSLGFLVDK 1005
Query: 162 RRMNVALTRARRALWVMGNAGALTQSDDWAALIADSKARNCYMDMDSLPKEFSVALAAKA 221
RRMNVA+TRA+ L+V+GN+ L + W L+ C + SL ++ ++
Sbjct: 1006 RRMNVAITRAKHFLFVVGNSNTLNRDQTWKGLV-----DFCKNQVQSLTMKYYENVSDYM 1060
Query: 222 PGYGPLQGKIPHNARGLRSAGQRHRSFDMNMESRSGTPSEDDEKVSRNGNYRPFKPPLEN 281
GY + + L+ + ++ +G D K + N +N
Sbjct: 1061 NGYYAFDQRQDYELNSLKQQFVCQQQLTAMPQTANGQNPTIDYKAEQLNNQ-------QN 1113
Query: 282 SLDDFDQSGEKYRDAWQHGIQKKQSSGGKGSPR 314
+ D + EK D Q SS +PR
Sbjct: 1114 TQSDSSEDDEKMEDLPATSQQALVSSSIHSTPR 1146
>gi|334183665|ref|NP_001185324.1| DNA helicase domain-containing protein [Arabidopsis thaliana]
gi|332196305|gb|AEE34426.1| DNA helicase domain-containing protein [Arabidopsis thaliana]
Length = 1016
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 77/205 (37%), Positives = 122/205 (59%), Gaps = 5/205 (2%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESV-INLPDEVYYKDPVLRPYVFFDVIHGRES 60
LL++QYRMHP I FP+R FY ++ D+ SV + ++ + + + PY F ++ +GRE
Sbjct: 621 LLNMQYRMHPSISIFPNREFYDMKILDAPSVRLRSYEKKFLPEKMYGPYSFINIAYGREQ 680
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
G S +N+ E + L + G ++VG+I+PYK Q+ +Q N
Sbjct: 681 F-GEGYSSKNLVEVSVVAEIVSKLYSVSRKTG-RTISVGVISPYKAQVFAIQERIGEKYN 738
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVMG 179
+E + + +VD FQG E D+II+S VR++ +G +GF+++ +R NVALTRAR LW++G
Sbjct: 739 TEGTFTVSVRSVDGFQGGEEDIIIISTVRSNGNGAIGFLSNQQRTNVALTRARYCLWILG 798
Query: 180 NAGALTQSDD-WAALIADSKARNCY 203
N LT + W L+ D+KARNC+
Sbjct: 799 NEATLTNNRSVWRQLVDDAKARNCF 823
>gi|15218807|ref|NP_176757.1| DNA helicase domain-containing protein [Arabidopsis thaliana]
gi|332196304|gb|AEE34425.1| DNA helicase domain-containing protein [Arabidopsis thaliana]
Length = 1050
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 77/205 (37%), Positives = 122/205 (59%), Gaps = 5/205 (2%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESV-INLPDEVYYKDPVLRPYVFFDVIHGRES 60
LL++QYRMHP I FP+R FY ++ D+ SV + ++ + + + PY F ++ +GRE
Sbjct: 621 LLNMQYRMHPSISIFPNREFYDMKILDAPSVRLRSYEKKFLPEKMYGPYSFINIAYGREQ 680
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
G S +N+ E + L + G ++VG+I+PYK Q+ +Q N
Sbjct: 681 F-GEGYSSKNLVEVSVVAEIVSKLYSVSRKTG-RTISVGVISPYKAQVFAIQERIGEKYN 738
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVMG 179
+E + + +VD FQG E D+II+S VR++ +G +GF+++ +R NVALTRAR LW++G
Sbjct: 739 TEGTFTVSVRSVDGFQGGEEDIIIISTVRSNGNGAIGFLSNQQRTNVALTRARYCLWILG 798
Query: 180 NAGALTQSDD-WAALIADSKARNCY 203
N LT + W L+ D+KARNC+
Sbjct: 799 NEATLTNNRSVWRQLVDDAKARNCF 823
>gi|6686402|gb|AAF23836.1|AC007234_8 F1E22.16 [Arabidopsis thaliana]
Length = 1075
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 77/205 (37%), Positives = 122/205 (59%), Gaps = 5/205 (2%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESV-INLPDEVYYKDPVLRPYVFFDVIHGRES 60
LL++QYRMHP I FP+R FY ++ D+ SV + ++ + + + PY F ++ +GRE
Sbjct: 646 LLNMQYRMHPSISIFPNREFYDMKILDAPSVRLRSYEKKFLPEKMYGPYSFINIAYGREQ 705
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
G S +N+ E + L + G ++VG+I+PYK Q+ +Q N
Sbjct: 706 F-GEGYSSKNLVEVSVVAEIVSKLYSVSRKTG-RTISVGVISPYKAQVFAIQERIGEKYN 763
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVMG 179
+E + + +VD FQG E D+II+S VR++ +G +GF+++ +R NVALTRAR LW++G
Sbjct: 764 TEGTFTVSVRSVDGFQGGEEDIIIISTVRSNGNGAIGFLSNQQRTNVALTRARYCLWILG 823
Query: 180 NAGALTQSDD-WAALIADSKARNCY 203
N LT + W L+ D+KARNC+
Sbjct: 824 NEATLTNNRSVWRQLVDDAKARNCF 848
>gi|328871491|gb|EGG19861.1| Regulator of nonsense transcripts [Dictyostelium fasciculatum]
Length = 1534
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 87/208 (41%), Positives = 119/208 (57%), Gaps = 10/208 (4%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
+L QYRMHP I FPS FYQ +L D E+V+ + +Y D P F+ + +E
Sbjct: 826 MLDTQYRMHPSISKFPSDQFYQAKLKDGENVVKYSNS-FYNDKKYGPINFYHIPDSQEDT 884
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
G S +N E K L + L + + K++VGIITPYKLQ K L E + N
Sbjct: 885 TIGK-SIKNNLEIKLVYVLLKKLVQEYPE--VKKMSVGIITPYKLQKKELL-EAKGAFN- 939
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGNA 181
E D+ +NTVD FQG E+D+II SCVR N +GF+ D RR+NV +TRARRA++V+G +
Sbjct: 940 -EKMDVVVNTVDGFQGAEKDIIIFSCVR--NKKIGFLRDTRRINVGITRARRAIYVVGYS 996
Query: 182 GALTQSDDWAALIADSKAR-NCYMDMDS 208
L Q +W A + K R Y+ +DS
Sbjct: 997 SLLEQDPNWGAYLRFIKDRIGKYVTIDS 1024
>gi|32492200|emb|CAE03468.1| OSJNBa0083N12.5 [Oryza sativa Japonica Group]
Length = 2646
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 81/209 (38%), Positives = 124/209 (59%), Gaps = 9/209 (4%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRP---YVFFDVIHGR 58
LL++QYRM P I FP+ FY ++ D +V++ VY KD P Y F ++ GR
Sbjct: 565 LLNIQYRMDPRISLFPNVQFYGRKILDGPNVMS---SVYNKDYTNLPFGTYAFINISDGR 621
Query: 59 ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV 118
E G S++N+ E + L + + KT K G +++G+I+PY Q+ ++ +
Sbjct: 622 EEKEGTGNSWRNLVEVAVVLHLIQTIFKTWKRKG-QMLSIGVISPYSSQVDSIESRLGKL 680
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWV 177
++ +G + + +VD FQG+E D+II+S VR++ G VGF+AD +R NVALTRAR LW+
Sbjct: 681 YDTCDGFHVRVKSVDGFQGEEDDIIILSTVRSNVKGIVGFLADEQRTNVALTRARHCLWI 740
Query: 178 MGNAGALTQSDD-WAALIADSKARNCYMD 205
+GNA L S W LIAD++ R C +D
Sbjct: 741 LGNANTLYSSGTVWKDLIADAQRRKCIID 769
>gi|218195491|gb|EEC77918.1| hypothetical protein OsI_17248 [Oryza sativa Indica Group]
gi|222629476|gb|EEE61608.1| hypothetical protein OsJ_16025 [Oryza sativa Japonica Group]
Length = 2693
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 81/209 (38%), Positives = 124/209 (59%), Gaps = 9/209 (4%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRP---YVFFDVIHGR 58
LL++QYRM P I FP+ FY ++ D +V++ VY KD P Y F ++ GR
Sbjct: 576 LLNIQYRMDPRISLFPNVQFYGRKILDGPNVMS---SVYNKDYTNLPFGTYAFINISDGR 632
Query: 59 ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV 118
E G S++N+ E + L + + KT K G +++G+I+PY Q+ ++ +
Sbjct: 633 EEKEGTGNSWRNLVEVAVVLHLIQTIFKTWKRKG-QMLSIGVISPYSSQVDSIESRLGKL 691
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWV 177
++ +G + + +VD FQG+E D+II+S VR++ G VGF+AD +R NVALTRAR LW+
Sbjct: 692 YDTCDGFHVRVKSVDGFQGEEDDIIILSTVRSNVKGIVGFLADEQRTNVALTRARHCLWI 751
Query: 178 MGNAGALTQSDD-WAALIADSKARNCYMD 205
+GNA L S W LIAD++ R C +D
Sbjct: 752 LGNANTLYSSGTVWKDLIADAQRRKCIID 780
>gi|255555527|ref|XP_002518800.1| conserved hypothetical protein [Ricinus communis]
gi|223542181|gb|EEF43725.1| conserved hypothetical protein [Ricinus communis]
Length = 2820
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 83/246 (33%), Positives = 131/246 (53%), Gaps = 11/246 (4%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPV----LRPYVFFDVIHG 57
LL +QYRMHP I FP+ FY ++ D+ N+ +VY K P+ PY F +V G
Sbjct: 658 LLDMQYRMHPFISRFPNSRFYFNQILDAS---NVKCKVYEKHPLPGPMFGPYSFINVFDG 714
Query: 58 RESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRN 117
RE S++N+ E + + L K +T+G+I+PY Q+ ++ +
Sbjct: 715 REEMDNIGHSWKNMVEVAIVLKIVRRLHKAWNGSN-KNLTIGVISPYAAQVNAIRDKLNK 773
Query: 118 VLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALW 176
G + + +VD FQG E D+II+S VRA++ G VGF+++ +R+NVALTRAR LW
Sbjct: 774 KYEDIYGFSVKVRSVDGFQGGEEDIIILSTVRANSGGAVGFLSNPQRINVALTRARHCLW 833
Query: 177 VMGNAGALTQSDD-WAALIADSKARNCYMDMDSLPKEFSVALAAKAPGYGPLQGKIPHNA 235
++GN L SD W L+ D+K R C+ ++D KE + + + L + ++
Sbjct: 834 ILGNERTLINSDSIWKELVFDAKQRQCFFNVDE-DKELAKTILEVKKEFDQLNDLLTGDS 892
Query: 236 RGLRSA 241
+SA
Sbjct: 893 AFFKSA 898
>gi|449018313|dbj|BAM81715.1| probable tRNA splicing endonuclease positive effector Sen1p
[Cyanidioschyzon merolae strain 10D]
Length = 1250
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 89/222 (40%), Positives = 124/222 (55%), Gaps = 18/222 (8%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY--------YKDPVLRPYVFFD 53
LL QYRMHP I FP+R FYQ +L + + V + E+Y P+L PY F D
Sbjct: 790 LLDTQYRMHPAIATFPTRWFYQNQLKNDDCVRS---ELYRPAFHRTGPPPPLLGPYCFVD 846
Query: 54 VIHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH 113
+ E + S N EA F + L E L + +GI+TPY+ Q++ LQ
Sbjct: 847 IAEATEERDATTASLSNPKEAAFAMQLVEILYERYWKASDRVWHLGILTPYRAQMRLLQQ 906
Query: 114 EFRN---VLNSEEGK-DLYINTVDAFQGQERDVIIMSCVRASNH--GVGFVADIRRMNVA 167
+L ++ + I+TVDAFQG+E+DVII S VR + H G+GFV D+RR+NVA
Sbjct: 907 ALDQSGLILPGQQMPCTIEIDTVDAFQGREKDVIIFSAVRTAQHRSGIGFVGDVRRLNVA 966
Query: 168 LTRARRALWVMGNAGAL-TQSDDWAALIADSKARNCYMDMDS 208
LTRA+ +L V+G+A AL S DW AL+ D++ R Y + S
Sbjct: 967 LTRAKVSLVVLGHAAALRAHSADWDALLCDAEQRGLYFESSS 1008
>gi|449498392|ref|XP_004160526.1| PREDICTED: uncharacterized protein LOC101225988 [Cucumis sativus]
Length = 1064
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 124/212 (58%), Gaps = 10/212 (4%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYK----DPVLRPYVFFDVIHG 57
LL+ QYRMHP I FP+ FY ++TD+ V+ DEVY K P+ PY F +V G
Sbjct: 545 LLNTQYRMHPSISYFPNSKFYSNQITDAPLVM---DEVYKKRYIPSPMFGPYTFINVSVG 601
Query: 58 RESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRN 117
+E S +N E + + E L K +S+ ++++G+I+ Y Q+ +Q
Sbjct: 602 KEEGDDDGRSKKNALEVAVVIKIIEKLYKAWRSVK-TRLSIGVISFYAAQVTAIQGRLGQ 660
Query: 118 VLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALW 176
+G + + +VD FQG E DVII+S VR++ +GF+++ +R+NVALTRAR LW
Sbjct: 661 KYEKRDGFTVKVKSVDGFQGGEEDVIILSTVRSNRRKKIGFISNSQRINVALTRARHCLW 720
Query: 177 VMGNAGALTQSD-DWAALIADSKARNCYMDMD 207
++G+A L S+ +W A+++D+K R CY + +
Sbjct: 721 IVGDATTLGNSNSEWEAVVSDAKDRQCYFNAE 752
>gi|449445385|ref|XP_004140453.1| PREDICTED: uncharacterized protein LOC101214394 [Cucumis sativus]
Length = 2763
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 124/212 (58%), Gaps = 10/212 (4%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYK----DPVLRPYVFFDVIHG 57
LL+ QYRMHP I FP+ FY ++TD+ V+ DEVY K P+ PY F +V G
Sbjct: 630 LLNTQYRMHPSISYFPNSKFYSNQITDAPLVM---DEVYKKRYIPSPMFGPYTFINVSVG 686
Query: 58 RESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRN 117
+E S +N E + + E L K +S+ ++++G+I+ Y Q+ +Q
Sbjct: 687 KEEGDDDGRSKKNALEVAVVIKIIEKLYKAWRSVK-TRLSIGVISFYAAQVTAIQGRLGQ 745
Query: 118 VLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALW 176
+G + + +VD FQG E DVII+S VR++ +GF+++ +R+NVALTRAR LW
Sbjct: 746 KYEKRDGFTVKVKSVDGFQGGEEDVIILSTVRSNRRKKIGFISNSQRINVALTRARHCLW 805
Query: 177 VMGNAGALTQSD-DWAALIADSKARNCYMDMD 207
++G+A L S+ +W A+++D+K R CY + +
Sbjct: 806 IVGDATTLGNSNSEWEAVVSDAKDRQCYFNAE 837
>gi|242062912|ref|XP_002452745.1| hypothetical protein SORBIDRAFT_04g031650 [Sorghum bicolor]
gi|241932576|gb|EES05721.1| hypothetical protein SORBIDRAFT_04g031650 [Sorghum bicolor]
Length = 956
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/210 (40%), Positives = 117/210 (55%), Gaps = 7/210 (3%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEV-YYKDPVLRPYVFFDVIHGRES 60
LL VQYRMHP I FP FY GR+TD +V+ E + P+ Y F ++ G ES
Sbjct: 706 LLDVQYRMHPWISKFPVESFYDGRITDGPNVLKRNYERRHLSGPMYGSYSFINIDSGNES 765
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV-L 119
S N EA V + + L K G V VG+++PYK Q++ +Q + L
Sbjct: 766 TGKHDRSLINSIEAAAVVRILQRLFKESVDTKRG-VRVGVVSPYKGQVRAIQEKITGAAL 824
Query: 120 NSEEGK--DLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALW 176
+ EG + + +VD FQG E DVII S VR++ G +GF+ADI R NVALTRA+ LW
Sbjct: 825 AAHEGGLFSVKVRSVDGFQGAEEDVIIFSTVRSNKAGKIGFLADINRTNVALTRAKHCLW 884
Query: 177 VMGNAGALTQSDD-WAALIADSKARNCYMD 205
++GNA L + W ++AD+K R CY D
Sbjct: 885 ILGNAKTLASAKTIWRGIVADAKDRGCYFD 914
>gi|384247387|gb|EIE20874.1| hypothetical protein COCSUDRAFT_48445 [Coccomyxa subellipsoidea
C-169]
Length = 863
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/204 (38%), Positives = 108/204 (52%), Gaps = 5/204 (2%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
+L QYRMHP I FPS FYQG L D E +++ P F V GRE
Sbjct: 560 MLDTQYRMHPAISAFPSAEFYQGSLRDGEGTEASTTRAWHEHACFGPLALFQVA-GREMV 618
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
G+ S N EA+ +C+Y L + V II+PY Q+K L+ +F L +
Sbjct: 619 EEGATSIINKQEAEMVLCIYRELVSRYPHLRTSH-QVAIISPYSAQVKLLRAKFVEALGA 677
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASNH---GVGFVADIRRMNVALTRARRALWVM 178
E + +NT+D FQG+E+D++I S VR+S +GFVAD RR+NVALTRAR +L V+
Sbjct: 678 EGRHLVDVNTIDGFQGREKDIVIFSAVRSSTQRKGKIGFVADERRVNVALTRARASLLVV 737
Query: 179 GNAGALTQSDDWAALIADSKARNC 202
N L + W L+ + A C
Sbjct: 738 ANFKVLERDGHWRNLVKHATANKC 761
>gi|384249658|gb|EIE23139.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coccomyxa subellipsoidea C-169]
Length = 1148
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/211 (39%), Positives = 116/211 (54%), Gaps = 12/211 (5%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVI-NLPDEVYYKDPVLRPYVFFDVIHGRES 60
LL+ QYRMHP I +PS FY G L D+ +V+ N +++ P P+ FFD G ES
Sbjct: 880 LLAEQYRMHPAISAWPSSFFYSGHLKDAPAVLGNARTAPFHRTPCFPPFAFFDCREGEES 939
Query: 61 HRGGSVSYQ-----NVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEF 115
GS S N E L+ L +K G +V +++ YK Q+ L F
Sbjct: 940 RGSGSGSGAAASLYNSTEVDLASSLFTGL---MKEHGKALGSVAVLSSYKAQVTALCSHF 996
Query: 116 RNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRA---SNHGVGFVADIRRMNVALTRAR 172
+ V + + + T+D FQG+E DV+I SCVRA + G+GF+AD+RRMNVALTRAR
Sbjct: 997 QRVHGAAKMASVEFATIDGFQGREADVVIFSCVRARASDSGGLGFLADVRRMNVALTRAR 1056
Query: 173 RALWVMGNAGALTQSDDWAALIADSKARNCY 203
++LWV+G L WAALI + A+ C
Sbjct: 1057 QSLWVIGRVSTLQGCAPWAALIKHAAAKGCL 1087
>gi|449526031|ref|XP_004170018.1| PREDICTED: probable helicase MAGATAMA 3-like, partial [Cucumis
sativus]
Length = 265
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/191 (38%), Positives = 111/191 (58%), Gaps = 2/191 (1%)
Query: 13 IRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESHRGGSVSYQNVD 72
IR FPSR FY L D++ V ++ P+ FFD+ G+ES GS S+ N+D
Sbjct: 1 IRSFPSREFYAESLEDAQDVKLRTTRAWHAYRCYGPFCFFDLHEGKESQPPGSGSWVNID 60
Query: 73 EAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNSEEGKDLYINTV 132
EA F + LY L + + V II+PY Q+K LQ +F ++ + + I +V
Sbjct: 61 EADFVLHLYHKLVISYPELK-SNSQVAIISPYSQQVKLLQEKFVDLFGMDPSGIVDITSV 119
Query: 133 DAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRALWVMGNAGALTQSDDWA 191
D QG+E+D+ I SCVRAS N +GF++D RRMNV +TRAR ++ V+G+A L + + W
Sbjct: 120 DGCQGREKDIAIFSCVRASENRSIGFLSDCRRMNVGITRARASILVVGSASTLKRDEHWN 179
Query: 192 ALIADSKARNC 202
L+ ++ R+C
Sbjct: 180 NLVESAQKRDC 190
>gi|325294544|ref|YP_004281058.1| DNA helicase [Desulfurobacterium thermolithotrophum DSM 11699]
gi|325064992|gb|ADY72999.1| DNA helicase [Desulfurobacterium thermolithotrophum DSM 11699]
Length = 721
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/218 (36%), Positives = 128/218 (58%), Gaps = 21/218 (9%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-------LPDEVYYKDPV--LRPYVFF 52
+L VQYRM+ I +FP+R FY+G+L +E V N L + +K+ + P F
Sbjct: 513 MLQVQYRMNEKIMEFPNREFYEGKLRAAEIVKNHTLADFDLKEPEKFKEILNPSEPLAFL 572
Query: 53 DV--IHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKC 110
D I+ E GS SY+N +EAK + + E L K +G+ K +GIITPY Q+K
Sbjct: 573 DTSDINAYEFQPEGSTSYENYEEAKIAISIAEELCK----IGVDKKDIGIITPYAAQVKL 628
Query: 111 LQHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALT 169
++ L E+ + +N+VD FQG+E++VII+S VR+++ G +GF+ D+RR+NVA+T
Sbjct: 629 IKQ-----LLLEKDLKVEVNSVDGFQGREKEVIIISFVRSNDEGEIGFLKDLRRLNVAIT 683
Query: 170 RARRALWVMGNAGALTQSDDWAALIADSKARNCYMDMD 207
R +R L +GNA L+ + + I + K + ++ ++
Sbjct: 684 RPKRKLIAIGNAETLSNHEVYKRFIENIKEKGTFLKLN 721
>gi|359473529|ref|XP_003631316.1| PREDICTED: uncharacterized protein LOC100855072 [Vitis vinifera]
Length = 883
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 124/209 (59%), Gaps = 3/209 (1%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLP-DEVYYKDPVLRPYVFFDVIHGRES 60
L++QYRMHP I FP +FY ++ D+ +V + ++ Y DPV RPY+F ++ GRE
Sbjct: 634 FLNLQYRMHPSISLFPCSNFYANQILDAPNVKHKAYEKKYLPDPVFRPYLFINISCGREE 693
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
S +N+ E + + ++L + +S ++ +G+++ Y Q+ +Q FR
Sbjct: 694 VDEVGHSVKNMVEVAVLMKIVQNLYQDWRSGIKEELRIGVLSSYTAQVLEIQERFRQKYE 753
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVMG 179
+ + + + T+D FQG E D+I++S VRA+N G VG +AD++ NVALTRAR LW++G
Sbjct: 754 NNDRFSVKVQTIDGFQGGEEDIILISTVRANNFGSVGVMADVKITNVALTRARHGLWILG 813
Query: 180 NAGALTQSDD-WAALIADSKARNCYMDMD 207
+ L S+ W ++ D+K R+C ++ D
Sbjct: 814 SERTLVMSETVWKDIVHDAKDRHCLLNAD 842
>gi|297801236|ref|XP_002868502.1| hypothetical protein ARALYDRAFT_915833 [Arabidopsis lyrata subsp.
lyrata]
gi|297314338|gb|EFH44761.1| hypothetical protein ARALYDRAFT_915833 [Arabidopsis lyrata subsp.
lyrata]
Length = 819
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 123/211 (58%), Gaps = 11/211 (5%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVI-NLPDEVYYKDPVLRPYVFFDVIHGRES 60
LL VQYRMHP I FP++ FY GR+ D+ +V ++ ++ Y + + + F +V HG+E
Sbjct: 575 LLDVQYRMHPSIISFPNKEFYGGRIKDAANVQESIYEKRYLQGNMFGSFSFINVGHGKEE 634
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKV--TVGIITPYKLQLKCLQHEFRNV 118
G V+ A + E L K K+ +VG+ITPYK Q++ +Q +
Sbjct: 635 FGDGHSPKNMVEVA----VISEILSNLFKVSSERKINMSVGVITPYKGQVRAIQDRIIDK 690
Query: 119 LNSEEGKDLYIN--TVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRAL 175
+S G+ +N +VD FQG E DVII+S VR++ N VGF+++ +R NVALTRAR L
Sbjct: 691 YSSLSGELFTLNVRSVDGFQGGEEDVIIISTVRSNCNRKVGFLSNRQRANVALTRARHCL 750
Query: 176 WVMGNAGALTQSDD-WAALIADSKARNCYMD 205
WV+GN L +S WA L+ DSK R C+ D
Sbjct: 751 WVIGNETTLARSGSIWAKLVRDSKRRKCFYD 781
>gi|410129750|dbj|BAM64829.1| hypothetical protein [Beta vulgaris]
Length = 1041
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 85/235 (36%), Positives = 129/235 (54%), Gaps = 13/235 (5%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLR-----PYVFFDVIH 56
LL++QYRMHP I FP+R FY+ ++ D+ +V E+ Y L Y F +V
Sbjct: 614 LLNIQYRMHPSISSFPNRQFYENKIVDAPNV----KEISYVKNFLDKGMYGTYSFINVSG 669
Query: 57 GRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEF- 115
G+E + G S +N++EA + L K + KV+VG+I+PYK Q+ LQ +
Sbjct: 670 GKEDFKKGH-SPRNLEEADVVDRIIAKLFKDFYCITKQKVSVGVISPYKGQVGLLQEKLE 728
Query: 116 RNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRA 174
+ +E + I +VD FQG E D+II+S VR + +G VGF+++ +R NVALTRAR
Sbjct: 729 KKYTKHKENFCINIRSVDGFQGGEEDIIIISTVRCNGNGSVGFLSNCQRTNVALTRARYC 788
Query: 175 LWVMGNAGALTQSDD-WAALIADSKARNCYMDMDSLPKEFSVALAAKAPGYGPLQ 228
LW++G+ L S W +L+ D+K R C+ D+ A K +G L+
Sbjct: 789 LWIVGSGSTLGNSTSVWNSLVFDAKTRGCFYDVKDDIDLIKATPAGKTDFFGYLK 843
>gi|358341434|dbj|GAA49117.1| regulator of nonsense transcripts 1 [Clonorchis sinensis]
Length = 1183
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 81/197 (41%), Positives = 114/197 (57%), Gaps = 7/197 (3%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
M L VQYRMHP + FPS FY+G L + + + ++ + P +FF G+E
Sbjct: 534 MRLQVQYRMHPALSAFPSNVFYEGSLQNGVTAEDRCKQIDFPWPNPDRPMFFYCTSGQEE 593
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNV 118
G VSY N EA E + + +G+ T+G+ITPY+ Q L H +
Sbjct: 594 ISGNGVSYLNRTEA----ATVEKIVTKMLKIGVHPNTIGVITPYEGQRAYLAHYLHYSGS 649
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRALWV 177
LNS+ +++ I +VDAFQG+E+D II+SCVRA+ N G+GF+ D RR+NVALTRAR L V
Sbjct: 650 LNSKLYQEIEIASVDAFQGREKDYIILSCVRANENQGIGFLNDPRRLNVALTRARYGLIV 709
Query: 178 MGNAGALTQSDDWAALI 194
+GN AL + W L+
Sbjct: 710 VGNPKALCKQPLWNQLL 726
>gi|320589505|gb|EFX01966.1| tRNA-splicing [Grosmannia clavigera kw1407]
Length = 2062
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 88/221 (39%), Positives = 121/221 (54%), Gaps = 32/221 (14%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES- 60
LL QYRMHP I FPSR FY+GRL D + L + ++ +P+L PY FFDV +E
Sbjct: 1634 LLDTQYRMHPDISRFPSRQFYEGRLIDGADMARLRAQPWHANPLLGPYRFFDVSGAQEKG 1693
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSM-GLGKVT-----------VGIITPYKLQL 108
HRG S+ V+E + GV L L + +++ G G T +GIITPYK QL
Sbjct: 1694 HRGRSL----VNENEVGVAL--QLYRRFRAVYGSGPQTSRGDDDEAGPKIGIITPYKAQL 1747
Query: 109 KCLQHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVAL 168
+ L+ F + + + + NT DAFQG+E D+II S H +NV L
Sbjct: 1748 QALRSRFSSQFGDDILQAVEFNTTDAFQGRECDIIIFS---HPPH----------LNVGL 1794
Query: 169 TRARRALWVMGNAGALTQSDDWAALIADSKARNCYMDMDSL 209
TRAR +LW++G++ AL Q + W ALI D+K R Y D +
Sbjct: 1795 TRARSSLWILGDSRALRQGEFWHALIEDAKGRGEYTGGDVM 1835
>gi|449445397|ref|XP_004140459.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Cucumis
sativus]
Length = 770
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 122/211 (57%), Gaps = 6/211 (2%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLP-DEVYYKDPVLRPYVFFDVIHGRES 60
LL QYRMHP + FP+ FY ++ D+ V+N ++ Y P+ PY F +V G E
Sbjct: 521 LLDTQYRMHPLVSYFPNSKFYGNKIMDASIVMNKEYEKEYLPSPLFGPYSFINVCGGEEE 580
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEF--RNV 118
G S +N+ E + + L K +++GII+PY Q+ +Q + +
Sbjct: 581 SNGDGQSKKNMVEVTVVTQIIQMLYKAW-CKNKKDISIGIISPYNAQVSSIQEKLGRKYE 639
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASN-HGVGFVADIRRMNVALTRARRALWV 177
+ EG + + ++D FQG E DVII+S VR++N H +GF+++ +R NVALTRAR LW+
Sbjct: 640 KKNNEGFGVKVKSIDGFQGGEEDVIIISTVRSNNGHNIGFLSNKQRTNVALTRARFCLWI 699
Query: 178 MGNAGALTQSD-DWAALIADSKARNCYMDMD 207
+G+A L +S+ +W +I D+K R C+ +++
Sbjct: 700 VGDAKTLGKSNSEWRDVIDDAKTRRCFFNVE 730
>gi|15242273|ref|NP_200022.1| tRNA-splicing endonuclease positive effector-related protein
[Arabidopsis thaliana]
gi|10177744|dbj|BAB11057.1| unnamed protein product [Arabidopsis thaliana]
gi|332008787|gb|AED96170.1| tRNA-splicing endonuclease positive effector-related protein
[Arabidopsis thaliana]
Length = 676
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 82/209 (39%), Positives = 126/209 (60%), Gaps = 7/209 (3%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVI-NLPDEVYYKDPVLRPYVFFDVIHGRES 60
LL VQYRMHP I FP++ FY GR+ D+E+V ++ + + K + + F +V G+E
Sbjct: 432 LLDVQYRMHPSISRFPNKEFYGGRIKDAENVKESIYQKRFLKGNMFDSFSFINVGRGKEE 491
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
G S +N+ E + +L K + KV+VG+++PYK Q++ +Q + + +
Sbjct: 492 FGDGH-SPKNMVEVAVISEIISNLYKVSCERRM-KVSVGVVSPYKGQMRAIQEKIGDKYS 549
Query: 121 SEEGKDLYIN--TVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWV 177
S G+ +N +VD FQG E D+II+S VR++ +G VGF+ + +R NVALTRAR LWV
Sbjct: 550 SLSGQQFTLNVRSVDGFQGGEEDIIIISTVRSNGNGKVGFLNNRQRANVALTRARHCLWV 609
Query: 178 MGNAGALTQSDD-WAALIADSKARNCYMD 205
+GN L S WA LI++S+ R C+ D
Sbjct: 610 IGNETTLALSGSIWATLISESRTRGCFHD 638
>gi|301123753|ref|XP_002909603.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262100365|gb|EEY58417.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 777
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 82/226 (36%), Positives = 121/226 (53%), Gaps = 28/226 (12%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
+LL+ QYRMHP I +FPS +FY GRL +++ + Y+ D +P +F DV G ++
Sbjct: 530 LLLNQQYRMHPEISEFPSAYFYGGRLVQDDNMREWTTQDYHHDRAFKPLLFLDV-QGAQT 588
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
GS S +N+ E + + L L + K +G+I PYK Q+ +E R +
Sbjct: 589 QVNGSTSLRNMSEVEAVIQLVRRLLTKFPRIEWKK-RIGVIAPYKQQI----YEVRGAVG 643
Query: 121 SEEGK-----DLYINTVDAFQGQERDVIIMSCVRASNHGV-----------------GFV 158
E + + +NTVD FQG+E+++II SCVR S G F
Sbjct: 644 KLEAEFDRHLGIEVNTVDGFQGREKEIIIYSCVRTSYGGRRKRKKRNRGNEDDDVLDAFW 703
Query: 159 ADIRRMNVALTRARRALWVMGNAGALTQSDDWAALIADSKARNCYM 204
AD RRMNVA+TRA+ +LW++GN+ L QS W ALI +K + Y+
Sbjct: 704 ADERRMNVAITRAKSSLWIVGNSKLLNQSRAWRALIQHTKDHDRYI 749
>gi|413919136|gb|AFW59068.1| hypothetical protein ZEAMMB73_252554 [Zea mays]
Length = 1056
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/208 (35%), Positives = 118/208 (56%), Gaps = 4/208 (1%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLP-DEVYYKDPVLRPYVFFDVIHGRES 60
LL+VQYRMHP I FP FY G+++D +V + + + PY F +V G E+
Sbjct: 812 LLNVQYRMHPEISKFPVSKFYGGKISDGPNVTHKNYGKRFLAGKWFGPYSFINVDCGHET 871
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
+ S +N E + + L S K++VG+++PY Q++ +Q E +
Sbjct: 872 TEKNARSLKNTIEVVVVARMVQRLYNETVSTR-TKLSVGVVSPYNAQVRAIQEELKKTYR 930
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVMG 179
S +G + + +VD FQG E D+II+S VR++ G VGF+++++R NVALTRA+ LW++G
Sbjct: 931 SYDGFSVKVKSVDGFQGAEEDIIIISTVRSNGAGSVGFLSNLQRANVALTRAKHCLWIVG 990
Query: 180 NAGALTQSDD-WAALIADSKARNCYMDM 206
N L S+ W +I D + R C+ D+
Sbjct: 991 NGTTLLSSNSIWQKIINDVQNRGCFFDV 1018
>gi|449478203|ref|XP_002195542.2| PREDICTED: probable helicase senataxin [Taeniopygia guttata]
Length = 2162
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 131/232 (56%), Gaps = 15/232 (6%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESHR 62
L+VQYRMHP I FPS + Y GR + I + + +PY+ FDV GRE
Sbjct: 1917 LTVQYRMHPDICLFPSNYVY-GRTLKTAKAIE--ENRCSSEWPFQPYLIFDVADGREERD 1973
Query: 63 GGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVL-NS 121
S Y N E K + L +++ K +GL ++ GIITPY Q + +Q + +V N+
Sbjct: 1974 NDS--YSNPREVKLVMELIRTIKEKRKDLGLRRI--GIITPYSAQKRKIQEQLDSVFKNN 2029
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASNH--GVGFVADIRRMNVALTRARRALWVMG 179
G+ ++TVDAFQG+E+D II+SCVRA++ +GF++ ++R+NV +TRAR +L+++G
Sbjct: 2030 SPGE---VDTVDAFQGREKDCIIVSCVRANSTKGSIGFLSSLQRLNVTITRARFSLFILG 2086
Query: 180 NAGALTQSDDWAALIADSKARNCYMDM--DSLPKEFSVALAAKAPGYGPLQG 229
L + +W LI D++ R + + KE L ++PG P +G
Sbjct: 2087 RLQTLMEDKNWNHLIQDAQKRGAIIRTTEKNYKKEALRILKLRSPGQAPAKG 2138
>gi|125548313|gb|EAY94135.1| hypothetical protein OsI_15908 [Oryza sativa Indica Group]
Length = 716
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/203 (37%), Positives = 113/203 (55%), Gaps = 8/203 (3%)
Query: 13 IRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESHRGGSVSYQNVD 72
I FPS+ FY+G L D E + ++ P+ FFDV G ES GS S+ N D
Sbjct: 455 ISIFPSKEFYEGVLEDGEGLSK--KRPWHSYSCFGPFCFFDV-DGTESQPSGSGSWVNED 511
Query: 73 EAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNSEEGKDLYINTV 132
E +F LY + + V +I+PY+ Q+K L+ FR+ + + + +NTV
Sbjct: 512 EVEFITLLYHQMAMRYPELK-SSSQVAVISPYRHQVKLLKDHFRSTFGDQSKEVIDVNTV 570
Query: 133 DAFQGQERDVIIMSCVRASN-HGVGFVADIRRMNVALTRARRALWVMGNAGALTQSDDWA 191
D FQG+E++V+I SCVR + +GFV+D RRMNVA+TRAR A+ V+G+A L + W
Sbjct: 571 DGFQGREKEVVIFSCVRCNKEQKIGFVSDFRRMNVAITRARSAVLVVGSASTLKEDKHWN 630
Query: 192 ALIADSKARNCYMDMDSLPKEFS 214
L+ +K R Y +PK F+
Sbjct: 631 NLVESAKERGRYF---QVPKPFT 650
>gi|186527077|ref|NP_198531.2| DEXDc and putative helicase domain-containing protein [Arabidopsis
thaliana]
gi|332006764|gb|AED94147.1| DEXDc and putative helicase domain-containing protein [Arabidopsis
thaliana]
Length = 839
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 126/212 (59%), Gaps = 13/212 (6%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYK----DPVLRPYVFFDVIHG 57
LL VQYRMHP I FP++ FY GR+ D+E N+ + +Y K + + F +V G
Sbjct: 595 LLDVQYRMHPSISRFPNKEFYGGRIKDAE---NVKESIYQKRFLQGNMFGSFSFINVGRG 651
Query: 58 RESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRN 117
+E G S +N+ E + +L K + KV+VG+++PYK Q++ +Q + +
Sbjct: 652 KEEFGDGH-SPKNMVEVAVVSEIISNLFKVSCERRM-KVSVGVVSPYKGQMRAIQEKIGD 709
Query: 118 VLNSEEGKDLYIN--TVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRA 174
+S G+ +N +VD FQG E D+II+S VR++++G VGF+ + +R NVALTRAR
Sbjct: 710 KYSSLSGQQFALNVRSVDGFQGGEEDIIIISTVRSNSNGKVGFLNNRQRANVALTRARHC 769
Query: 175 LWVMGNAGALTQSDD-WAALIADSKARNCYMD 205
LWV+GN L S WA LI++S+ R C+ D
Sbjct: 770 LWVIGNETTLALSGSIWATLISESRTRGCFYD 801
>gi|10177999|dbj|BAB11372.1| unnamed protein product [Arabidopsis thaliana]
Length = 880
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 126/212 (59%), Gaps = 13/212 (6%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYK----DPVLRPYVFFDVIHG 57
LL VQYRMHP I FP++ FY GR+ D+E N+ + +Y K + + F +V G
Sbjct: 636 LLDVQYRMHPSISRFPNKEFYGGRIKDAE---NVKESIYQKRFLQGNMFGSFSFINVGRG 692
Query: 58 RESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRN 117
+E G S +N+ E + +L K + KV+VG+++PYK Q++ +Q + +
Sbjct: 693 KEEFGDGH-SPKNMVEVAVVSEIISNLFKVSCERRM-KVSVGVVSPYKGQMRAIQEKIGD 750
Query: 118 VLNSEEGKDLYIN--TVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRA 174
+S G+ +N +VD FQG E D+II+S VR++++G VGF+ + +R NVALTRAR
Sbjct: 751 KYSSLSGQQFTLNVRSVDGFQGGEEDIIIISTVRSNSNGKVGFLNNRQRANVALTRARHC 810
Query: 175 LWVMGNAGALTQSDD-WAALIADSKARNCYMD 205
LWV+GN L S WA LI++S+ R C+ D
Sbjct: 811 LWVIGNETTLALSGSIWATLISESRTRGCFYD 842
>gi|357491667|ref|XP_003616121.1| DNA-binding protein SMUBP-2 [Medicago truncatula]
gi|355517456|gb|AES99079.1| DNA-binding protein SMUBP-2 [Medicago truncatula]
Length = 978
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/213 (37%), Positives = 123/213 (57%), Gaps = 13/213 (6%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLR-----PYVFFDVIH 56
+L VQYRMHP I FPS+ FY G+L+D+ N+ E+ Y L Y F ++
Sbjct: 665 MLDVQYRMHPSISMFPSKEFYDGQLSDA----NIVREISYNKRFLEGKMYGSYSFINISK 720
Query: 57 GRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFR 116
G+E S +NV EA + L+K KV++GII+PYK Q+ +Q + +
Sbjct: 721 GKEQCNHDH-SLKNVIEAAAISEIIGRLKKEFVR-ARNKVSIGIISPYKAQVHEIQEKVK 778
Query: 117 NVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRAL 175
+ S+ + + +VD FQG E D+II+S VR++ G VGF+++ +R NVA+TRAR L
Sbjct: 779 QYMVSDPNFSVSVRSVDGFQGGEEDIIIISTVRSNLSGKVGFLSNRQRANVAITRARYCL 838
Query: 176 WVMGNAGALTQSDD-WAALIADSKARNCYMDMD 207
W++GNA L S+ W ++ D+K R+C+ + D
Sbjct: 839 WIVGNATTLVNSNSVWRKVVVDAKERDCFHNTD 871
>gi|343429606|emb|CBQ73179.1| related to SEN1 protein [Sporisorium reilianum SRZ2]
Length = 2239
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/200 (38%), Positives = 115/200 (57%), Gaps = 6/200 (3%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LLS+QYRMHP I FPS+ FY +L D ++ L + ++K ++RP+ F
Sbjct: 1790 LLSIQYRMHPEISVFPSKAFYDSKLQDGPNMAELTRQPWHKYELMRPFKFLSTKAPESPG 1849
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
R S+ N +EA + LYE L+ S +G++T YK Q+ L+ F+
Sbjct: 1850 RMHSII--NKEEANVALALYERLRTDNPSENF-DYRIGVVTMYKAQVFELKRTFQQRYGL 1906
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVR--ASNHGVGFVADIRRMNVALTRARRALWVMG 179
+ + NTVD FQGQE+D+II+SCVR A +GF++D RR+NVA+TRA+ L+V+G
Sbjct: 1907 DIADRIDFNTVDGFQGQEKDIIILSCVRSAAEPRSIGFLSDRRRLNVAVTRAKSNLFVIG 1966
Query: 180 NAGALTQSDD-WAALIADSK 198
NA L + D W L+A ++
Sbjct: 1967 NAEHLRRGDPIWERLVATAE 1986
>gi|356510822|ref|XP_003524133.1| PREDICTED: uncharacterized protein LOC100802419 [Glycine max]
Length = 2812
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 123/213 (57%), Gaps = 12/213 (5%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVI--NLPDEVYYKDPVLRPYVFFDVIHGRE 59
L++QYRMHP I FP+ HFY ++ D+ +V+ N + Y P+ PY F +V+ G E
Sbjct: 646 FLNIQYRMHPAISSFPNSHFYFNQILDAPNVVRKNYRKQ-YLPGPMFGPYSFINVVGGIE 704
Query: 60 SHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGK--VTVGIITPYKLQLKCLQHEFRN 117
S +N+ E + + ++ K+ K +++G+++PY Q+ +Q
Sbjct: 705 EFDDAGRSRKNMVEVAI---VMKIIKNCFKAWCDSKENLSIGVVSPYAAQVVAIQDLLGQ 761
Query: 118 VLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVG--FVADIRRMNVALTRARRAL 175
++ +G D+ + T+D FQG ERD+II+S VR +NH F+++ +R NVALTRAR L
Sbjct: 762 RYDTHDGFDVKVKTIDGFQGGERDIIILSTVR-TNHSTSLQFISNHQRTNVALTRARYCL 820
Query: 176 WVMGNAGALTQSDD-WAALIADSKARNCYMDMD 207
WV+GN LT ++ W +L+ D+K R C+ + D
Sbjct: 821 WVLGNERTLTNEENVWKSLVLDAKKRRCFFNAD 853
>gi|359473531|ref|XP_002269567.2| PREDICTED: uncharacterized protein LOC100251075 [Vitis vinifera]
Length = 2818
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 123/209 (58%), Gaps = 3/209 (1%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLP-DEVYYKDPVLRPYVFFDVIHGRES 60
L++QYRMHP I FP +FY ++ D+ +V + ++ Y DPV R Y+F ++ GRE
Sbjct: 803 FLNLQYRMHPSISLFPCSNFYANQILDAPNVKHKAYEKKYLPDPVFRLYLFINISCGREE 862
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
S +N+ E + + ++L + +S ++ +G+++PY Q+ +Q +
Sbjct: 863 VDEVGHSVKNMVEVAVLMKIVQNLYQAWRSGIKEELRIGVLSPYTAQVLEIQERLKQKYE 922
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVMG 179
+ + + + T+D FQG E D+I++S VRA+N G VG +AD++ NVALTRAR LW++G
Sbjct: 923 NNDMFSVKVQTIDGFQGGEEDIILISTVRANNFGSVGVMADVKITNVALTRARHCLWILG 982
Query: 180 NAGALTQSDD-WAALIADSKARNCYMDMD 207
+ L S+ W ++ D+K R+C ++ D
Sbjct: 983 SERTLVMSETVWKDIVHDAKDRHCLLNAD 1011
>gi|256082379|ref|XP_002577434.1| nonsense-mediated mRNA decay protein 1 (rent1) [Schistosoma
mansoni]
gi|238662752|emb|CAZ33672.1| nonsense-mediated mRNA decay protein 1 (rent1),putative
[Schistosoma mansoni]
Length = 1325
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/195 (40%), Positives = 113/195 (57%), Gaps = 7/195 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESHR 62
L VQYRMHP + FPS FY+G L + + + ++ + P +FF G+E
Sbjct: 676 LQVQYRMHPALSAFPSNVFYEGSLQNGVTAEDRCKKIDFPWPNPDRPMFFYCTSGQEEIS 735
Query: 63 GGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVLN 120
G VSY N EA E + + +G+ T+G+ITPY+ Q L H + LN
Sbjct: 736 GNGVSYLNRTEA----ATVEKIVTKMLKIGVHPNTIGVITPYEGQRAYLAHYLHYSGSLN 791
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRALWVMG 179
++ +++ I +VDAFQG+E+D II+SCVRA+ N G+GF+ D RR+NVALTRAR L V+G
Sbjct: 792 AKLYQEIEIASVDAFQGREKDYIILSCVRANENQGIGFLNDPRRLNVALTRARYGLIVVG 851
Query: 180 NAGALTQSDDWAALI 194
N AL + W L+
Sbjct: 852 NPKALCKQPLWNQLL 866
>gi|10178000|dbj|BAB11373.1| unnamed protein product [Arabidopsis thaliana]
Length = 834
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/210 (39%), Positives = 127/210 (60%), Gaps = 8/210 (3%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVI-NLPDEVYYKDPVLRPYVFFDVIHGRES 60
LL+VQYRMHP I FP++ FY GR+TD+ +V ++ ++ + + + + F +V G+E
Sbjct: 591 LLNVQYRMHPSISRFPNKEFYGGRITDAANVQESIYEKRFLQGNMFGTFSFINVGRGKEE 650
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
G S +N+ E + +L K + S K++VG+I+PYK Q++ +Q + N
Sbjct: 651 FGDGH-SPKNMVEVAVISKIISNLFK-VSSQRKQKMSVGVISPYKGQVRAIQERVGDKYN 708
Query: 121 SEEGKDLY---INTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALW 176
S L+ + +VD FQG E DVII+S VR + +G VGF+++ +R NVALTRAR LW
Sbjct: 709 SLSVDQLFTLNVQSVDGFQGGEVDVIIISTVRCNVNGNVGFLSNRQRANVALTRARHCLW 768
Query: 177 VMGNAGALTQSDD-WAALIADSKARNCYMD 205
V+GN L S WA LI++S+ R C+ D
Sbjct: 769 VIGNGTTLALSGSIWAELISESRTRGCFYD 798
>gi|294896732|ref|XP_002775704.1| splicing endonuclease positive effector sen1, putative [Perkinsus
marinus ATCC 50983]
gi|239881927|gb|EER07520.1| splicing endonuclease positive effector sen1, putative [Perkinsus
marinus ATCC 50983]
Length = 674
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/195 (43%), Positives = 120/195 (61%), Gaps = 22/195 (11%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL QYRM P I +F S+ FY GRL +ES P + LRP +F D G E
Sbjct: 437 LLDEQYRMLPEIANFASKEFYDGRLKTAESC-RFPSSLGQP---LRPLLFLDSRLGSE-Q 491
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
RGG+ S N +EA + K ++++ K++VG++TPY+ Q ++ S
Sbjct: 492 RGGT-SLVNTEEAII-------VGKMVEAVANRKLSVGVVTPYRQQALLIRRTV-----S 538
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRALWVMGN 180
G + ++TVDA+QGQE+D+IIMSCVR++ + G+GFVAD RR+NV+LTRA+ ALW++GN
Sbjct: 539 MSGAE--VDTVDAYQGQEKDIIIMSCVRSNRDGGIGFVADYRRLNVSLTRAKYALWIVGN 596
Query: 181 AGALTQSDD-WAALI 194
A +L +S WA LI
Sbjct: 597 AESLGRSSKVWADLI 611
>gi|15240130|ref|NP_198532.1| tRNA-splicing endonuclease positive effector-related protein
[Arabidopsis thaliana]
gi|332006765|gb|AED94148.1| tRNA-splicing endonuclease positive effector-related protein
[Arabidopsis thaliana]
Length = 871
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/210 (39%), Positives = 127/210 (60%), Gaps = 8/210 (3%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVI-NLPDEVYYKDPVLRPYVFFDVIHGRES 60
LL+VQYRMHP I FP++ FY GR+TD+ +V ++ ++ + + + + F +V G+E
Sbjct: 628 LLNVQYRMHPSISRFPNKEFYGGRITDAANVQESIYEKRFLQGNMFGTFSFINVGRGKEE 687
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
G S +N+ E + +L K + S K++VG+I+PYK Q++ +Q + N
Sbjct: 688 FGDGH-SPKNMVEVAVISKIISNLFK-VSSQRKQKMSVGVISPYKGQVRAIQERVGDKYN 745
Query: 121 SEEGKDLY---INTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALW 176
S L+ + +VD FQG E DVII+S VR + +G VGF+++ +R NVALTRAR LW
Sbjct: 746 SLSVDQLFTLNVQSVDGFQGGEVDVIIISTVRCNVNGNVGFLSNRQRANVALTRARHCLW 805
Query: 177 VMGNAGALTQSDD-WAALIADSKARNCYMD 205
V+GN L S WA LI++S+ R C+ D
Sbjct: 806 VIGNGTTLALSGSIWAELISESRTRGCFYD 835
>gi|218184942|gb|EEC67369.1| hypothetical protein OsI_34480 [Oryza sativa Indica Group]
Length = 1437
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 85/252 (33%), Positives = 126/252 (50%), Gaps = 12/252 (4%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKD----PVLRPYVFFDVIHG 57
LL VQYRMHP I FP+ +FY R++D SV E Y K P+ Y F + +
Sbjct: 753 LLEVQYRMHPGINKFPNANFYDNRISDGPSV---QQEDYMKSYLPGPIYGAYSFIHIEND 809
Query: 58 RESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRN 117
E S +N+ E + E L K S + ++G+I+PY Q+ LQ
Sbjct: 810 MEMLDELGQSSKNMVEVAVATNIVERLAKEC-SEKRQRTSLGVISPYTAQVIALQERLGK 868
Query: 118 VLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALW 176
+ E + + ++D FQG E D+I++S VR++ +G VGF++D R+NVALTRA+ LW
Sbjct: 869 QFKNHEFLSVTVKSIDGFQGGEEDIILISTVRSNKNGKVGFLSDAGRINVALTRAKYCLW 928
Query: 177 VMGNAGALTQSDD-WAALIADSKARNCYMDM--DSLPKEFSVALAAKAPGYGPLQGKIPH 233
++GN L S+ WA L+ DSK R C+ + D E + + + + H
Sbjct: 929 ILGNGATLLASNSIWAELVHDSKRRGCFFNALDDKNLAEIIMHATKEGEQRNQREQRSAH 988
Query: 234 NARGLRSAGQRH 245
NA S RH
Sbjct: 989 NANRWSSGSSRH 1000
>gi|412993566|emb|CCO14077.1| predicted protein [Bathycoccus prasinos]
Length = 1063
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 79/226 (34%), Positives = 122/226 (53%), Gaps = 25/226 (11%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESHR 62
LS QYRM P IR+FPS FY G L D ++ +++ + +P+VF+DV HG+E
Sbjct: 682 LSTQYRMLPEIREFPSDQFYGGELRDGPGLLTQNYREWHECKLYKPFVFYDVQHGKEESS 741
Query: 63 GGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQL----KCLQHEFRNV 118
S+ N +EA F V L L K + + II+PY+ Q+ + L+ +F +
Sbjct: 742 SSGFSWVNEEEATFAVELAHQLLKANPVLKREGPKIAIISPYRAQVSMIRRKLERKFGGM 801
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVR------------ASNHG-------VGFVA 159
N G+ + + ++D QG E+DV+I S VR ASN +GFVA
Sbjct: 802 HNY--GRIVEVLSIDNSQGSEKDVVIFSLVRAPLNDMFQISKKASNANTKSRRNVLGFVA 859
Query: 160 DIRRMNVALTRARRALWVMGNAGALTQSDDWAALIADSKARNCYMD 205
D RR+NV LTRA+ +++V+GNA A+ +W AL+ ++ R C ++
Sbjct: 860 DERRINVGLTRAKCSMFVLGNAKAMMTDPNWGALVESARKRGCTIE 905
>gi|21717153|gb|AAM76346.1|AC074196_4 putative helicase [Oryza sativa Japonica Group]
gi|31433282|gb|AAP54820.1| tRNA-splicing endonuclease positive effector, putative, expressed
[Oryza sativa Japonica Group]
Length = 1361
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 85/252 (33%), Positives = 126/252 (50%), Gaps = 12/252 (4%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKD----PVLRPYVFFDVIHG 57
LL VQYRMHP I FP+ +FY R++D SV E Y K P+ Y F + +
Sbjct: 677 LLEVQYRMHPGINKFPNANFYDNRISDGPSV---QQEDYMKSYLPGPIYGAYSFIHIEND 733
Query: 58 RESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRN 117
E S +N+ E + E L K S + ++G+I+PY Q+ LQ
Sbjct: 734 MEMLDELGQSSKNMVEVAVATNIVERLAKEC-SEKRQRTSLGVISPYTAQVIALQERLGK 792
Query: 118 VLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALW 176
+ E + + ++D FQG E D+I++S VR++ +G VGF++D R+NVALTRA+ LW
Sbjct: 793 QFKNHEFLSVTVKSIDGFQGGEEDIILISTVRSNKNGKVGFLSDAGRINVALTRAKYCLW 852
Query: 177 VMGNAGALTQSDD-WAALIADSKARNCYMDM--DSLPKEFSVALAAKAPGYGPLQGKIPH 233
++GN L S+ WA L+ DSK R C+ + D E + + + + H
Sbjct: 853 ILGNGATLLASNSIWAELVHDSKRRGCFFNALDDKNLAEIIMHATKEGEQRNQREQRSAH 912
Query: 234 NARGLRSAGQRH 245
NA S RH
Sbjct: 913 NANRWSSGSSRH 924
>gi|297805244|ref|XP_002870506.1| hypothetical protein ARALYDRAFT_493692 [Arabidopsis lyrata subsp.
lyrata]
gi|297316342|gb|EFH46765.1| hypothetical protein ARALYDRAFT_493692 [Arabidopsis lyrata subsp.
lyrata]
Length = 867
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 82/209 (39%), Positives = 127/209 (60%), Gaps = 7/209 (3%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLRPYVFFDVIHGRES 60
LL+VQYRMHP I FP++ FY GR+TD+ V + ++ + + + + F +V G+E
Sbjct: 623 LLNVQYRMHPSISCFPNKEFYDGRITDASIVQERIYEKRFLQGKMFGSFSFINVGRGKEE 682
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
G S +N+ E + +L K + S+ K++VG+I+PYK Q++ +Q +
Sbjct: 683 FCDGH-SPKNMVEVAVISEIISNLFK-VSSLRNQKMSVGVISPYKGQVRAIQERIGDKYG 740
Query: 121 SEEGK--DLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWV 177
S G+ L + +VD FQG E D+II+S VR++ +G VGF+++ +R NVALTRAR LWV
Sbjct: 741 SLSGQLFTLNVQSVDGFQGGEEDIIIISTVRSNVNGNVGFLSNHQRANVALTRARHCLWV 800
Query: 178 MGNAGALTQSDD-WAALIADSKARNCYMD 205
+GN L S WA LI++S+ R C+ D
Sbjct: 801 IGNETTLALSGSIWAELISESRTRGCFYD 829
>gi|449443986|ref|XP_004139756.1| PREDICTED: uncharacterized protein LOC101214715 [Cucumis sativus]
gi|449521497|ref|XP_004167766.1| PREDICTED: uncharacterized LOC101214715 [Cucumis sativus]
Length = 737
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 120/214 (56%), Gaps = 13/214 (6%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKD----PVLRPYVFFDVIHG 57
LL+VQYRMHP I FP+ FY +++D N+ E Y K P+ Y F D+ G
Sbjct: 456 LLNVQYRMHPSISCFPNSKFYSNQISDGP---NVKTEGYVKKFLNGPMFGSYSFMDINEG 512
Query: 58 RESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGL----GKVTVGIITPYKLQLKCLQH 113
RE G + S++N+ E + + L S K+++G+++PY Q+ ++H
Sbjct: 513 REEKDGITQSWKNMVEVDVVLQIIHKLYNKGTSTTCVDSNEKISIGVVSPYSAQVAAIEH 572
Query: 114 EFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRAR 172
+ N + +++VD FQG E D+II+S VR++ + +GF++ +R NVALTRAR
Sbjct: 573 KLGRNYNKCNSFQVRVSSVDGFQGGEEDIIIISTVRSNRSSSIGFLSSNQRTNVALTRAR 632
Query: 173 RALWVMGNAGALTQSDD-WAALIADSKARNCYMD 205
LW++GN L++SD W L+ D+K R C+ +
Sbjct: 633 YCLWILGNFNTLSKSDSVWEDLVFDAKNRGCFFN 666
>gi|443894317|dbj|GAC71665.1| tRNA-splicing endonuclease positive effector [Pseudozyma antarctica
T-34]
Length = 2923
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 119/211 (56%), Gaps = 6/211 (2%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LLS+QYRMHP I FPS+ FY +L D + L + ++K + RP+ F
Sbjct: 1784 LLSIQYRMHPEISVFPSKAFYDSKLLDGPDMAELTRQPWHKYELTRPFKFLSTKAPESPG 1843
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
R S+ N +EA + LYE L+ +GI+T YK Q+ L+ F+
Sbjct: 1844 RFHSII--NREEANVALALYERLRTDHPRENF-DYRIGIVTMYKAQVFELRRTFQQRYGQ 1900
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASNH--GVGFVADIRRMNVALTRARRALWVMG 179
+ + + NTVD FQGQE+D+II+SCVR+++ +GF++D RR+NVA+TRA+ L+V+G
Sbjct: 1901 DIVERIDFNTVDGFQGQEKDIIILSCVRSASEPRSIGFLSDRRRLNVAVTRAKSNLFVIG 1960
Query: 180 NAGALTQSDD-WAALIADSKARNCYMDMDSL 209
NA L + D W +L+A ++ R + L
Sbjct: 1961 NAEHLRRGDAIWESLVATAEQRGAVQPITHL 1991
>gi|226481521|emb|CAX73658.1| Regulator of nonsense transcripts 1 [Schistosoma japonicum]
Length = 731
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 79/195 (40%), Positives = 112/195 (57%), Gaps = 7/195 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESHR 62
L VQYRMHP + FPS FY+G L + + + + + P +FF G+E
Sbjct: 139 LQVQYRMHPALSAFPSNVFYEGSLQNGVTAEDRCKKTDFPWPNPDRPMFFYCTSGQEEIS 198
Query: 63 GGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVLN 120
G VSY N EA E + + +G+ T+G+ITPY+ Q L H + LN
Sbjct: 199 GNGVSYLNRTEA----ATVEKIVTKMLKIGVHPNTIGVITPYEGQRAYLAHYLHYSGSLN 254
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRALWVMG 179
++ +++ I +VDAFQG+E+D II+SCVRA+ N G+GF+ D RR+NVALTRAR L V+G
Sbjct: 255 AKLYQEIEIASVDAFQGREKDYIILSCVRANENQGIGFLNDPRRLNVALTRARYGLIVVG 314
Query: 180 NAGALTQSDDWAALI 194
N AL + W L+
Sbjct: 315 NPKALCKQPLWNQLL 329
>gi|256082381|ref|XP_002577435.1| nonsense-mediated mRNA decay protein 1 (rent1) [Schistosoma
mansoni]
gi|238662753|emb|CAZ33673.1| nonsense-mediated mRNA decay protein 1 (rent1),putative
[Schistosoma mansoni]
Length = 1301
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 79/195 (40%), Positives = 113/195 (57%), Gaps = 7/195 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESHR 62
L VQYRMHP + FPS FY+G L + + + ++ + P +FF G+E
Sbjct: 652 LQVQYRMHPALSAFPSNVFYEGSLQNGVTAEDRCKKIDFPWPNPDRPMFFYCTSGQEEIS 711
Query: 63 GGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVLN 120
G VSY N EA E + + +G+ T+G+ITPY+ Q L H + LN
Sbjct: 712 GNGVSYLNRTEA----ATVEKIVTKMLKIGVHPNTIGVITPYEGQRAYLAHYLHYSGSLN 767
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRALWVMG 179
++ +++ I +VDAFQG+E+D II+SCVRA+ N G+GF+ D RR+NVALTRAR L V+G
Sbjct: 768 AKLYQEIEIASVDAFQGREKDYIILSCVRANENQGIGFLNDPRRLNVALTRARYGLIVVG 827
Query: 180 NAGALTQSDDWAALI 194
N AL + W L+
Sbjct: 828 NPKALCKQPLWNQLL 842
>gi|222613192|gb|EEE51324.1| hypothetical protein OsJ_32291 [Oryza sativa Japonica Group]
Length = 1402
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 85/252 (33%), Positives = 126/252 (50%), Gaps = 12/252 (4%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKD----PVLRPYVFFDVIHG 57
LL VQYRMHP I FP+ +FY R++D SV E Y K P+ Y F + +
Sbjct: 718 LLEVQYRMHPGINKFPNANFYDNRISDGPSV---QQEDYMKSYLPGPIYGAYSFIHIEND 774
Query: 58 RESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRN 117
E S +N+ E + E L K S + ++G+I+PY Q+ LQ
Sbjct: 775 MEMLDELGQSSKNMVEVAVATNIVERLAKEC-SEKRQRTSLGVISPYTAQVIALQERLGK 833
Query: 118 VLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALW 176
+ E + + ++D FQG E D+I++S VR++ +G VGF++D R+NVALTRA+ LW
Sbjct: 834 QFKNHEFLSVTVKSIDGFQGGEEDIILISTVRSNKNGKVGFLSDAGRINVALTRAKYCLW 893
Query: 177 VMGNAGALTQSDD-WAALIADSKARNCYMDM--DSLPKEFSVALAAKAPGYGPLQGKIPH 233
++GN L S+ WA L+ DSK R C+ + D E + + + + H
Sbjct: 894 ILGNGATLLASNSIWAELVHDSKRRGCFFNALDDKNLAEIIMHATKEGEQRNQREQRSAH 953
Query: 234 NARGLRSAGQRH 245
NA S RH
Sbjct: 954 NANRWSSGSSRH 965
>gi|242076908|ref|XP_002448390.1| hypothetical protein SORBIDRAFT_06g026425 [Sorghum bicolor]
gi|241939573|gb|EES12718.1| hypothetical protein SORBIDRAFT_06g026425 [Sorghum bicolor]
Length = 895
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 76/207 (36%), Positives = 117/207 (56%), Gaps = 4/207 (1%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDE-VYYKDPVLRPYVFFDVIHGRES 60
LLSVQYRMHP I FP +FY +++D +V+ E + + Y F +V G E+
Sbjct: 652 LLSVQYRMHPEISKFPVANFYDSKVSDGPNVVCKNYERKFLPGKMFGSYSFINVEGGHET 711
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
S S +N E + + + L + G K++VG+++PY Q++ +Q + +
Sbjct: 712 TEKHSQSLKNTIEVAAVLWIVKRLFEESVLTG-TKLSVGVVSPYNAQVRAIQEKLGKSCD 770
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVMG 179
EG + + +VD FQG E D+IIMS VR++ G VGF+ +++R NVALTRA+ LW++G
Sbjct: 771 MYEGFSVKVKSVDGFQGAEEDIIIMSTVRSNGDGSVGFLTNLQRTNVALTRAKHCLWIVG 830
Query: 180 NAGALTQSDD-WAALIADSKARNCYMD 205
N L QS W ++ D+ AR C D
Sbjct: 831 NVTTLAQSRSVWQRIVKDAMARGCLFD 857
>gi|357143184|ref|XP_003572832.1| PREDICTED: LOW QUALITY PROTEIN: helicase sen1-like [Brachypodium
distachyon]
Length = 924
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 77/210 (36%), Positives = 117/210 (55%), Gaps = 5/210 (2%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDE-VYYKDPVLRPYVFFDVIHGRES 60
LL VQYRMHP I FP FY+ R+TD E+V+ E + P+ Y F ++ G+ES
Sbjct: 676 LLDVQYRMHPGISKFPVSSFYESRITDGENVLKRDYERKHLTGPMYGSYSFINIEGGKES 735
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
S N E + + L K K++VG+++PYK Q++ +Q +
Sbjct: 736 TGKFDKSLVNTIEVAAVTRIVQRLFKECMETR-RKLSVGVVSPYKGQVRAIQEKLGKTYE 794
Query: 121 SEEGK-DLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVM 178
G+ + + +VD FQG E D+II+S VR++ G VGF+ ++ R NVALTRA+ LW++
Sbjct: 795 VRPGEFSVKVRSVDGFQGAEEDIIIISTVRSNAAGSVGFLNNVNRTNVALTRAKHCLWIL 854
Query: 179 GNAGALTQSDD-WAALIADSKARNCYMDMD 207
GNA L S W ++AD+K R C+ + +
Sbjct: 855 GNATTLVSSKTIWQKIVADAKDRGCFFNAN 884
>gi|115483164|ref|NP_001065175.1| Os10g0537600 [Oryza sativa Japonica Group]
gi|113639784|dbj|BAF27089.1| Os10g0537600, partial [Oryza sativa Japonica Group]
Length = 985
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/252 (33%), Positives = 126/252 (50%), Gaps = 12/252 (4%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKD----PVLRPYVFFDVIHG 57
LL VQYRMHP I FP+ +FY R++D SV E Y K P+ Y F + +
Sbjct: 301 LLEVQYRMHPGINKFPNANFYDNRISDGPSV---QQEDYMKSYLPGPIYGAYSFIHIEND 357
Query: 58 RESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRN 117
E S +N+ E + E L K S + ++G+I+PY Q+ LQ
Sbjct: 358 MEMLDELGQSSKNMVEVAVATNIVERLAKEC-SEKRQRTSLGVISPYTAQVIALQERLGK 416
Query: 118 VLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALW 176
+ E + + ++D FQG E D+I++S VR++ +G VGF++D R+NVALTRA+ LW
Sbjct: 417 QFKNHEFLSVTVKSIDGFQGGEEDIILISTVRSNKNGKVGFLSDAGRINVALTRAKYCLW 476
Query: 177 VMGNAGALTQSDD-WAALIADSKARNCYMDM--DSLPKEFSVALAAKAPGYGPLQGKIPH 233
++GN L S+ WA L+ DSK R C+ + D E + + + + H
Sbjct: 477 ILGNGATLLASNSIWAELVHDSKRRGCFFNALDDKNLAEIIMHATKEGEQRNQREQRSAH 536
Query: 234 NARGLRSAGQRH 245
NA S RH
Sbjct: 537 NANRWSSGSSRH 548
>gi|414585634|tpg|DAA36205.1| TPA: hypothetical protein ZEAMMB73_541257 [Zea mays]
Length = 2606
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 76/224 (33%), Positives = 125/224 (55%), Gaps = 10/224 (4%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDP---VLRPYVFFDVIHGR 58
LL++QYRM P I FP+ FY ++ D +V Y KD + Y F ++ GR
Sbjct: 583 LLNIQYRMSPCISLFPNAKFYDKKILDGPNV----HSSYNKDCTGLLFGSYAFINITDGR 638
Query: 59 ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV 118
E G S+QN+ E + L + K+ + G +++G+++PY Q+ ++
Sbjct: 639 EQKEGAGNSWQNLVEVAVVMHLIRTIFKSWRKRDQG-ISIGVVSPYSSQVAAIKDRLGKK 697
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWV 177
++ + + + ++D FQG+E D+II+S VR++ G VGF+ADI+R NVALTRAR LW+
Sbjct: 698 YDTSDNFHVRVKSIDGFQGEEDDIIILSTVRSNERGNVGFLADIQRTNVALTRARHCLWI 757
Query: 178 MGNAGALTQSDD-WAALIADSKARNCYMDMDSLPKEFSVALAAK 220
+GNA L +S W L++D++ R C + + P+ + L K
Sbjct: 758 LGNANTLYKSGTVWTDLVSDAQRRKCISNATTDPELCKLILHVK 801
>gi|326514986|dbj|BAJ99854.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 710
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 81/209 (38%), Positives = 114/209 (54%), Gaps = 4/209 (1%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVI-NLPDEVYYKDPVLRPYVFFDVIHGRES 60
LL QYRMHP I FP FY G + D +V+ + + PY F +V GRES
Sbjct: 471 LLDTQYRMHPEISRFPVWRFYGGEIGDGPNVVFKSHRRRLLRGNMFGPYSFINVRGGRES 530
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
S S +N E + E L + S G +++VGI++PY Q++ Q +
Sbjct: 531 SEEHSRSPKNTIEIAVVSLIVERLFRESASSGT-RLSVGILSPYNAQVRAFQEKLEKPYG 589
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVMG 179
S +G L I +VD FQG E DVII+S VR++ G VGF+ D +R NVALTRA+ LWV+G
Sbjct: 590 SRDGFSLKIKSVDGFQGGEEDVIIISTVRSNEDGAVGFLRDAKRTNVALTRAKHCLWVIG 649
Query: 180 NAGALTQSDD-WAALIADSKARNCYMDMD 207
NA L+++ W ++ DS+ R + D
Sbjct: 650 NATTLSKNRSVWQDIVYDSQRRQRFFHAD 678
>gi|357491661|ref|XP_003616118.1| DNA-binding protein SMUBP-2 [Medicago truncatula]
gi|355517453|gb|AES99076.1| DNA-binding protein SMUBP-2 [Medicago truncatula]
Length = 950
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 79/209 (37%), Positives = 122/209 (58%), Gaps = 5/209 (2%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLP-DEVYYKDPVLRPYVFFDVIHGRES 60
+L+VQYRMHP I FPSR FY +L+DS+ V + ++ + + Y F ++ G+E
Sbjct: 702 MLNVQYRMHPSISIFPSREFYNKKLSDSQIVREISYNKRFLGGKMYGSYSFINISKGKEQ 761
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
S +NV EA + +QK KV++GII+PYK Q+ +Q + +
Sbjct: 762 CNHDH-SLKNVIEAAAISEIIGRIQKEFVRTR-NKVSIGIISPYKAQVHEIQERVKQYMV 819
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVMG 179
S + + +VD FQG E D+II+S VR++ G VGF+++ +R NVA+TRAR LW++G
Sbjct: 820 SAPNFSINVRSVDGFQGGEEDLIIISTVRSNFGGKVGFLSNRQRTNVAITRARYCLWIVG 879
Query: 180 NAGALTQSDD-WAALIADSKARNCYMDMD 207
NA L S+ W ++ D+K RNC+ + D
Sbjct: 880 NATTLINSNSVWRKVVMDAKQRNCFHNAD 908
>gi|356569406|ref|XP_003552892.1| PREDICTED: uncharacterized protein LOC100820164 [Glycine max]
Length = 1054
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 123/211 (58%), Gaps = 7/211 (3%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYY-KDPVLRPYVFFDVIHGRES 60
LL+VQYRMHP I FP+ FY ++ DS SV E ++ + + Y F +V +G++
Sbjct: 670 LLNVQYRMHPSISLFPNMEFYDKQILDSPSVKERSHEKHFLHGDMFKFYSFINVAYGQDE 729
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEF--RNV 118
G+ S +N+ E + +L K S V+VG+I+PYK Q+ +Q R V
Sbjct: 730 FDEGN-SRKNMVEVAVVSEIVLNLYKESASRK-QTVSVGVISPYKAQVLAIQDALGKRFV 787
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWV 177
N + L ++TVD FQG E DVII+S VR +N G VGF+++ +R NVALTRAR LW+
Sbjct: 788 GNVDNDFSLKVSTVDGFQGGEEDVIIISTVRYNNMGYVGFLSNFQRTNVALTRARYCLWI 847
Query: 178 MGNAGALTQSDD-WAALIADSKARNCYMDMD 207
+GN+ L S W LI D++AR CY + D
Sbjct: 848 VGNSETLMNSGSVWERLILDARARGCYHNAD 878
>gi|242076910|ref|XP_002448391.1| hypothetical protein SORBIDRAFT_06g026430 [Sorghum bicolor]
gi|241939574|gb|EES12719.1| hypothetical protein SORBIDRAFT_06g026430 [Sorghum bicolor]
Length = 925
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 127/220 (57%), Gaps = 5/220 (2%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLP-DEVYYKDPVLRPYVFFDVIHGRES 60
LL+VQYRMHP I +FP FY G+++D +V + ++ + + PY F +V G E+
Sbjct: 674 LLNVQYRMHPDISNFPVATFYDGKVSDGPNVSHKDYNKRFLSGNLFGPYSFINVEGGHET 733
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
S +N E V + + L K S G KV+VG+++PY Q++ +Q +
Sbjct: 734 TEKHGRSLKNTIEVAAVVRMVQRLFKEAVSKG-SKVSVGVVSPYNAQVRAIQEKLGKSYT 792
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVMG 179
G + + +VD FQG E D+II+S VR++ G VGF+ +++R NVALTRA+ LW++G
Sbjct: 793 MYNGFSVNVKSVDGFQGAEEDIIIISTVRSNGAGAVGFLTNLQRTNVALTRAKHCLWIVG 852
Query: 180 NAGALTQSDD-WAALIADSKARNCYMDMDSLPKEFSVALA 218
N L+ ++ W +I +++ R + D++ K+ S A+A
Sbjct: 853 NGTTLSSNNTVWQKMIKNARDRGLFFDVND-DKDLSNAVA 891
>gi|356537819|ref|XP_003537422.1| PREDICTED: uncharacterized ATP-dependent helicase C29A10.10c-like
[Glycine max]
Length = 925
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 82/214 (38%), Positives = 121/214 (56%), Gaps = 13/214 (6%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLR-----PYVFFDVIH 56
LL+VQYRMHP I FP++ FY+ +L+DS V EV Y L Y F ++
Sbjct: 660 LLNVQYRMHPSISLFPNKEFYEKQLSDSPFV----REVSYNRHFLEGKMYDSYSFINIAK 715
Query: 57 GRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEF- 115
G+E G ++N+ EA + E L+ S G KV++GII+PY Q+ +Q
Sbjct: 716 GKEKMPRGGHGWKNMVEAAAVCKIIESLENEFFSTG-KKVSIGIISPYNAQVYEIQERIT 774
Query: 116 RNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRA 174
R L S+ + + +VD FQG E D+II+S VR++ +G +GF+ + +R NVALTRAR
Sbjct: 775 RQNLVSDPNFSVSVRSVDGFQGGEEDIIIISTVRSNKNGKIGFLDNRQRANVALTRARYC 834
Query: 175 LWVMGNAGALTQS-DDWAALIADSKARNCYMDMD 207
LW++GN L+ W L+ D+K R C+ + D
Sbjct: 835 LWILGNENTLSSDYSLWRNLVNDAKERGCFHNAD 868
>gi|50543164|ref|XP_499748.1| YALI0A04279p [Yarrowia lipolytica]
gi|49645613|emb|CAG83672.1| YALI0A04279p [Yarrowia lipolytica CLIB122]
Length = 527
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 76/189 (40%), Positives = 116/189 (61%), Gaps = 9/189 (4%)
Query: 21 FYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESHRGGSVSYQNVDEAKFGVCL 80
FY L D+ + ++ L PY+FF+V G+ G + S+ N E +F L
Sbjct: 319 FYDNVLKDAPGMELKTARKWHSTEHLPPYMFFNV-EGKHKF-GDNHSFCNTAEIQFANKL 376
Query: 81 YEHLQKTLKSMGLG-KVTVGIITPYKLQLKCLQHEFRNVLNSE-EGKDLYINTVDAFQGQ 138
+ LK +G G K+ +GI++PYK Q++ L+H F ++E E L I TVD+ QG+
Sbjct: 377 ---VSAVLKCVGAGEKLDIGIVSPYKQQVEKLRHHFEQRYDTEKETMTLEIQTVDSLQGR 433
Query: 139 ERDVIIMSCVRA--SNHGVGFVADIRRMNVALTRARRALWVMGNAGALTQSDDWAALIAD 196
E+D+IIMSCVRA + H VGF+AD+RRMNVA+TRA+ +LW++GNA L ++ W +L+ +
Sbjct: 434 EKDIIIMSCVRAHPTAHTVGFLADVRRMNVAITRAKASLWIIGNADTLVSNEKWESLLRN 493
Query: 197 SKARNCYMD 205
+ RN Y +
Sbjct: 494 ANERNVYCE 502
>gi|413919137|gb|AFW59069.1| hypothetical protein ZEAMMB73_371687 [Zea mays]
Length = 968
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 121/211 (57%), Gaps = 8/211 (3%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDE-VYYKDPVLRPYVFFDVIHGRES 60
LL++QYRMHP I FP+ FY+GR++D+ +V+ +Y + PY F ++ GRE
Sbjct: 627 LLNMQYRMHPSISIFPNTSFYEGRISDATNVMEKEHRRMYLPGSMFGPYSFINIEDGREE 686
Query: 61 HRGGSVSYQN-VDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVL 119
S +N V+ A LY + K+ KVTVG+I PY Q+ +Q + +
Sbjct: 687 RDELGHSKRNFVEAAVIEEILYRLRRACFKTKR--KVTVGVICPYNAQVVAIQGKIEKM- 743
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVM 178
+ + N+VD FQG E D+II+S VR+++ G VGF+++ +R NV LTRAR LW++
Sbjct: 744 -RFDPLQVKTNSVDGFQGGEEDIIILSTVRSNSVGKVGFLSNAQRANVCLTRARHCLWIL 802
Query: 179 GNAGALTQSDD-WAALIADSKARNCYMDMDS 208
GNA L S W+ L+ D+K R C+ + S
Sbjct: 803 GNATTLASSGSIWSDLVRDAKDRRCFFNASS 833
>gi|241634349|ref|XP_002410507.1| splicing endonuclease positive effector sen1, putative [Ixodes
scapularis]
gi|215503436|gb|EEC12930.1| splicing endonuclease positive effector sen1, putative [Ixodes
scapularis]
Length = 1103
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 83/202 (41%), Positives = 120/202 (59%), Gaps = 17/202 (8%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
+L+ Q RMH I FPSR+FY G+L + V L D Y P L PY+ F+V+ E +
Sbjct: 897 MLTDQRRMHSEICSFPSRYFYDGKL---QPVAGL-DASYASFP-LNPYLVFNVLGSPEMN 951
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
G S S N EA+F V L ++K + G G ++ +IT Y+ Q +
Sbjct: 952 DGSSTSMANHGEAEFVVRLCHTVRKVV---GPG-TSICVITFYRAQKTTISELL------ 1001
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASNHG--VGFVADIRRMNVALTRARRALWVMG 179
+ +NTVD FQGQERDV+++SCVRAS+ +GFVAD RR+NV++TRAR+AL++ G
Sbjct: 1002 QRDSSFEVNTVDGFQGQERDVVVLSCVRASHPLGYIGFVADARRLNVSITRARKALFICG 1061
Query: 180 NAGALTQSDDWAALIADSKARN 201
+ L S +W+ALI D++ R+
Sbjct: 1062 HLDTLEDSLEWSALIKDARNRD 1083
>gi|357140936|ref|XP_003572012.1| PREDICTED: uncharacterized protein LOC100831140 [Brachypodium
distachyon]
Length = 1373
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 111/207 (53%), Gaps = 4/207 (1%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLP-DEVYYKDPVLRPYVFFDVIHGRES 60
LL VQYRMHP I FP+ FY R++DS SV + Y P+ Y F + + E
Sbjct: 667 LLEVQYRMHPCISKFPNAKFYGNRISDSPSVKKKDYTKSYLPGPIYGSYSFIHIENDMEM 726
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
S +N+ E + E L K + +VG+I+PY Q+ LQ +
Sbjct: 727 LDDLGQSSKNMVEVAVAANIIERLAKECWKKSR-RTSVGVISPYTAQVIALQEKLGRKFE 785
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVMG 179
E + + ++D FQG E D+I++S VR++ G +GF++D R+NVALTRA+ LW++G
Sbjct: 786 KHEFLSVTVKSIDGFQGGEEDIILISTVRSNKDGKIGFLSDAGRINVALTRAKHCLWILG 845
Query: 180 NAGALTQSDD-WAALIADSKARNCYMD 205
N L S+ WA L+ DSK R C+ +
Sbjct: 846 NGATLLASNSIWAELVNDSKRRGCFFE 872
>gi|440292088|gb|ELP85330.1| hypothetical protein EIN_085720 [Entamoeba invadens IP1]
Length = 1109
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/224 (37%), Positives = 124/224 (55%), Gaps = 30/224 (13%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLR--------PYVFFD 53
LL+VQYRMHP I FPS++FY+G L D + E DP L P VF
Sbjct: 638 LLNVQYRMHPAISSFPSKNFYKGNLHDGVT------EQQRSDPRLDHFFPVEHWPVVF-- 689
Query: 54 VIH--GRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCL 111
IH G+ES SY NV+E V + + LK+ G +GII+ Y Q++ +
Sbjct: 690 -IHHEGKESVGENGASYYNVNE----VGIVTAVIGELKNRGFQDRELGIISTYNSQIQLI 744
Query: 112 QHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTR 170
N E+ ++ ++VD+FQG E+++I++SCVR++ G+GFV+D RRMNVALTR
Sbjct: 745 SE------NIEKQGNIQTSSVDSFQGSEKEIIVLSCVRSNERLGIGFVSDHRRMNVALTR 798
Query: 171 ARRALWVMGNAGALTQSDDWAALIADSKARNCYMDMDSLPKEFS 214
AR+ L V+GN L+ +W LI + C + + + P +F+
Sbjct: 799 ARKGLVVVGNMRTLSTDQNWRKLILTYGEKQCVVSLQTFPFKFT 842
>gi|330040413|ref|XP_003239900.1| component of a tRNA splicing complex, sen1 [Cryptomonas paramecium]
gi|327206826|gb|AEA39002.1| component of a tRNA splicing complex, sen1 [Cryptomonas paramecium]
Length = 680
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 120/201 (59%), Gaps = 10/201 (4%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRE-S 60
L +QYRMHP I FP+R FY+ + DS V++ + +Y+ P+ FFDV E +
Sbjct: 432 FLEIQYRMHPQISSFPARKFYKNGIKDS--VLSDSENLYFLR-CFSPFNFFDVSDSLENA 488
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
H S+ N+DE + + L+ T + + GII+ Y+ Q+ +Q+ F N
Sbjct: 489 HLKNEFSWCNLDEIRVINLFIQLLKYTHQKFNAQ--SFGIISGYEGQVDEIQNYFCNEKI 546
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRALWVMG 179
S+E K NT+D+FQG+E+D II SCVR+ G+GF++D RR+NVA TRA++ W +G
Sbjct: 547 SKEKKT---NTIDSFQGKEKDFIIFSCVRSRFKSGIGFLSDCRRINVAFTRAKKYFWCIG 603
Query: 180 NAGALTQSDDWAALIADSKAR 200
N+ +L+++ W +++DSK R
Sbjct: 604 NSTSLSKNPTWKEILSDSKRR 624
>gi|388853403|emb|CCF53023.1| related to SEN1 protein [Ustilago hordei]
Length = 2314
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/202 (38%), Positives = 116/202 (57%), Gaps = 6/202 (2%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LLS+QYRMHP I FPS+ FY +L D + L + ++K + RP+ F
Sbjct: 1815 LLSIQYRMHPEISVFPSKAFYDSKLQDGPDMAELTRQPWHKYELTRPFKFLSTKAPESPG 1874
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
R S+ N +EA + LYE L +T +GI+T YK Q+ L+ F+
Sbjct: 1875 RFHSII--NKEEANVALALYERL-RTDNPRENFDYRIGIVTMYKAQVFELKRTFQQRYGQ 1931
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRA--SNHGVGFVADIRRMNVALTRARRALWVMG 179
+ + + NTVD FQGQE+D+II+SCVR+ +GF++D RR+NVA+TRA+ L+++G
Sbjct: 1932 DIVERIDFNTVDGFQGQEKDIIILSCVRSLPKPSSIGFLSDRRRLNVAVTRAKSNLFIIG 1991
Query: 180 NAGALTQSDD-WAALIADSKAR 200
NA L + D W +L+A ++ R
Sbjct: 1992 NAEHLRRGDAIWESLVAAAEQR 2013
>gi|224008879|ref|XP_002293398.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220970798|gb|EED89134.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 1178
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/228 (34%), Positives = 125/228 (54%), Gaps = 31/228 (13%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN------LPDEVYYKDPVLRPYVFFDVI 55
+L QYRMHP I DFP R FY G+L D +V + L V+ K P +P+ D+
Sbjct: 924 MLDTQYRMHPAISDFPRRIFYDGKLLDGPNVKHPEFGNPLKRAVFKKFPAFQPFTVLDLE 983
Query: 56 HGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVT--------------VGI- 100
E RGG+ S N EA+ + L+ +L+ G G ++ +GI
Sbjct: 984 SSEE--RGGT-SLANSAEAQLALHLFNNLRN-----GTGGLSSKSRVAVPHYLSHLIGIS 1035
Query: 101 -ITPYKLQLKCLQHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFV 158
ITPY Q L+ F + L +E + + +NTVDAFQG+E +++I SCVRA+ + G+GF+
Sbjct: 1036 QITPYAQQAALLRRTFGDALGAEYERLVEVNTVDAFQGREANIVIFSCVRAAGSKGIGFL 1095
Query: 159 ADIRRMNVALTRARRALWVMGNAGALTQSDDWAALIADSKARNCYMDM 206
+D+RRMNVALTRA+ +V+ ++ + W L+ ++ + +++
Sbjct: 1096 SDVRRMNVALTRAKNFFFVIARCSSIIVNPYWRDLVEHARETDAVIEV 1143
>gi|326930440|ref|XP_003211355.1| PREDICTED: probable helicase senataxin-like [Meleagris gallopavo]
Length = 2717
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 118/201 (58%), Gaps = 13/201 (6%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESHR 62
L+VQYRMHP I FPS + Y GR ++ + + +PY+ FDV GRE
Sbjct: 2285 LTVQYRMHPDICLFPSSYVY-GRTLKTDKATE--ENRCSSEWPFQPYLVFDVGDGREERD 2341
Query: 63 GGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVL-NS 121
S + N E K + + +++ K +GL ++ GIITPY Q K +Q E V N+
Sbjct: 2342 KDS--FSNPQEVKLVLEIIRTIKEKRKDLGLRRI--GIITPYSAQKKKIQEELDRVFKNN 2397
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRA--SNHGVGFVADIRRMNVALTRARRALWVMG 179
G+ ++TVDAFQG+E+D II++CVRA S +GF+A ++R+NV +TRAR +L+++G
Sbjct: 2398 SPGE---VDTVDAFQGREKDCIIVTCVRANSSKGSIGFLASLQRLNVTITRARFSLFILG 2454
Query: 180 NAGALTQSDDWAALIADSKAR 200
L ++ DW LI D++ R
Sbjct: 2455 RLKTLMENKDWNELIQDAQRR 2475
>gi|440492195|gb|ELQ74785.1| tRNA-splicing endonuclease positive effector (SEN1), partial
[Trachipleistophora hominis]
Length = 525
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/209 (36%), Positives = 127/209 (60%), Gaps = 17/209 (8%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
+LL+VQYRMHP I +FP+++FY RL +SV E Y++ V P + F ++G E
Sbjct: 321 VLLNVQYRMHPTIVEFPNQYFYDKRLQTHKSVKK--RENPYQNVV--PPISFIQVNGEE- 375
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
S+ NV EA++ + L K +K+ L +GIITPYK Q+K ++ +
Sbjct: 376 RTDSYFSFYNVAEARYIGNIISELMKNVKNYDLSN-KIGIITPYKAQMKKIKEVLLGI-- 432
Query: 121 SEEGKDLY----INTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALW 176
KD+ +NTVD FQGQE+DVI++S V++ N +GF++D+RR+NV++TRA+ +L
Sbjct: 433 ---RKDILDFVCVNTVDGFQGQEKDVILISTVKSKN--IGFLSDLRRINVSITRAKHSLI 487
Query: 177 VMGNAGALTQSDDWAALIADSKARNCYMD 205
++GN L+ S+ W ++++ + +N +
Sbjct: 488 IIGNTKVLSTSNAWKSMLSHYRKKNLVFN 516
>gi|357491687|ref|XP_003616131.1| Regulator of nonsense transcripts-like protein [Medicago
truncatula]
gi|355517466|gb|AES99089.1| Regulator of nonsense transcripts-like protein [Medicago
truncatula]
Length = 950
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/215 (37%), Positives = 125/215 (58%), Gaps = 16/215 (7%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLR-----PYVFFDVIH 56
+L+VQYRMHP I FP + FY +++D+ V + YK L Y F ++
Sbjct: 671 MLNVQYRMHPAISMFPCKEFYDEQISDAPVV----KDASYKKSFLEGEMYASYSFINIAK 726
Query: 57 GRE-SHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEF 115
G+E S RG S+ +N+ E + +L+K K KV++GII+PY Q+ +Q +
Sbjct: 727 GKEKSGRGHSL--KNMVEVAVISEMINNLKKEFKRTQ-KKVSIGIISPYNAQVYEIQEKV 783
Query: 116 RNVLN-SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARR 173
+ + S+ + + ++D FQG E D+II+S VR++ G VGF+++ +R NVA+TRAR
Sbjct: 784 KQYTSVSDTDFSVSVRSIDGFQGGEEDIIIISTVRSNGSGNVGFLSNRQRANVAMTRARY 843
Query: 174 ALWVMGNAGALTQSDD-WAALIADSKARNCYMDMD 207
LW++GNA L SD W LI D+K R+CY + D
Sbjct: 844 CLWILGNASTLANSDSIWRKLIVDAKRRDCYHNAD 878
>gi|147802044|emb|CAN66065.1| hypothetical protein VITISV_025023 [Vitis vinifera]
Length = 2275
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 122/209 (58%), Gaps = 3/209 (1%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLP-DEVYYKDPVLRPYVFFDVIHGRES 60
L++QYRMHP I FP +FY ++ D+ +V + ++ Y DPV RPY+F ++ GRE
Sbjct: 546 FLNLQYRMHPSISLFPCSNFYANQILDAPNVKHKAYEKKYLPDPVFRPYLFINISCGREE 605
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
S +N+ E + + ++L + +S ++ +G+++ Y Q+ +Q
Sbjct: 606 VDEVGHSVKNMVEVAVLMKIVQNLYQDWRSGIKEELRIGVLSXYTAQVLEIQERXXQKYE 665
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVMG 179
+ + + + T+D FQG E D+I++S VRA+N G VG +AD++ NVALTRAR LW++G
Sbjct: 666 NNDRFSVKVQTIDGFQGGEEDIILISTVRANNFGSVGVMADVKITNVALTRARHGLWILG 725
Query: 180 NAGALTQSDD-WAALIADSKARNCYMDMD 207
+ L S+ W ++ D+K R+C ++ D
Sbjct: 726 SERTLVMSETVWKDIVHDAKDRHCLLNAD 754
>gi|303278610|ref|XP_003058598.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459758|gb|EEH57053.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 826
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 118/219 (53%), Gaps = 15/219 (6%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
+L QYRMHP IR+FPS FYQ L D ++ + RP+VF D I G+E +
Sbjct: 422 VLKTQYRMHPAIREFPSARFYQNELEDGPRQAAKTSRPWHNVSLFRPFVFVD-IAGKE-Y 479
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
GG S+ N +EA V + L + + G+ +GII+PYK Q++ ++ + +
Sbjct: 480 LGGGTSWSNDEEAHAAVAIATALMRNYPQLATGE-KIGIISPYKAQVRNIRKILNDAIGE 538
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRA----------SNHGVGFVADIRRMNVALTRA 171
E + +N++D FQG+E++V + S RA +GFV+D RRMNV LTRA
Sbjct: 539 ERSSRVDVNSIDGFQGREKEVCVFSVCRAPREDRGAKKKKTRRLGFVSDERRMNVGLTRA 598
Query: 172 RRALWVMGNAGALTQSDD--WAALIADSKARNCYMDMDS 208
R +L V+G+ AL S D W AL+ ++ R+ + S
Sbjct: 599 RASLIVLGSGKALKASGDENWCALVNSARERDLIVKPPS 637
>gi|255570463|ref|XP_002526190.1| ATP binding protein, putative [Ricinus communis]
gi|223534494|gb|EEF36194.1| ATP binding protein, putative [Ricinus communis]
Length = 782
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/210 (36%), Positives = 121/210 (57%), Gaps = 6/210 (2%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEV-YYKDPVLRPYVFFDVIHGRES 60
LL++QYRMHP I P+R FY ++ D+ +V + E + + + Y F ++ HG+E
Sbjct: 360 LLNIQYRMHPSISLLPNREFYGKQILDALNVKEISHERRFLEGNMYSSYSFINISHGKEE 419
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
S +N+ E + +L S KV++GII+PYK Q+ +Q + N +
Sbjct: 420 FDEFR-SLRNMVEVAVVSDIVANLFSEFISTK-KKVSIGIISPYKAQVHAIQEKIGNYSS 477
Query: 121 SEEGK-DLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVM 178
+ + + + ++D FQG E DVII S VR +N G VGF+++ +R NVALTRAR LW++
Sbjct: 478 GSDAEFSVNVRSIDGFQGGEEDVIIFSTVRCNNKGSVGFLSNCQRANVALTRARYCLWIL 537
Query: 179 GNAGALTQSDD-WAALIADSKARNCYMDMD 207
GNA L +S W L+AD++ R C+ + D
Sbjct: 538 GNAATLNKSGSIWKKLVADAERRRCFHNAD 567
>gi|294909689|ref|XP_002777827.1| splicing endonuclease positive effector sen1, putative [Perkinsus
marinus ATCC 50983]
gi|239885789|gb|EER09622.1| splicing endonuclease positive effector sen1, putative [Perkinsus
marinus ATCC 50983]
Length = 959
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/208 (37%), Positives = 121/208 (58%), Gaps = 10/208 (4%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLP-DEVYYKDPVLRPYVFFDVIHGRES 60
LLS Q+RMHP I +FPS FY G + ++E+++ L D+ + P+ P FF+V G+E
Sbjct: 614 LLSTQFRMHPAIAEFPSNEFYDGGVKNAENIMELVGDQPWSHIPIFGPVSFFNV-PGQEE 672
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
S++ N EA F + +++ LQ + + +I+PY Q++ ++ +FR + N
Sbjct: 673 KSYTSLT--NEAEANFIIHIFKMLQVCWPKEPW-REKLAVISPYAEQVRLIRQKFRQLYN 729
Query: 121 SEEGK--DLYINTVDAFQGQERDVIIMSCVRASNHG--VGFVADIRRMNVALTRARRALW 176
E K + +NTVD FQG+E+D +++S VRA VGFV D+RRMNV+LTR R LW
Sbjct: 730 MVESKVCPVEVNTVDGFQGREKDCVVVSTVRADPDATSVGFVRDVRRMNVSLTRGRTNLW 789
Query: 177 VMGNAGALTQSDDWAALIA-DSKARNCY 203
V G+ L+ + W + I KA+ +
Sbjct: 790 VCGHQRMLSNNPHWKSFIVKQQKAKRLF 817
>gi|358349482|ref|XP_003638765.1| Regulator of nonsense transcripts-like protein [Medicago
truncatula]
gi|355504700|gb|AES85903.1| Regulator of nonsense transcripts-like protein [Medicago
truncatula]
Length = 1644
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/213 (34%), Positives = 123/213 (57%), Gaps = 4/213 (1%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL+ Q+RMHP I FP+ +FY ++ DS +V + Y P+ Y F +V GRE
Sbjct: 639 LLNTQHRMHPEISLFPNSYFYSNKINDSPNVQRNYGKKYLPGPMFGTYSFINVAGGREEF 698
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV-LN 120
SY+N+ E + + ++L K + K+++GI++PY Q+ +Q + + +
Sbjct: 699 DDDGRSYKNIAEVAVVMTILKNLHKVWLAKK-EKLSIGIVSPYAGQVLKIQEKLAMMNYS 757
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRALWVMG 179
S +G ++ + ++D FQG E+D+II+S VR + + F++ +R NVALTRAR LW++G
Sbjct: 758 SHDGFNVNVKSIDGFQGGEQDIIILSTVRTNYRTSLQFISSPQRTNVALTRARYCLWILG 817
Query: 180 NAGALTQSDD-WAALIADSKARNCYMDMDSLPK 211
N AL +++ W AL+ DSK R + D P+
Sbjct: 818 NERALVNNNNVWRALVIDSKNRGLFFSTDQNPE 850
>gi|168060609|ref|XP_001782287.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666217|gb|EDQ52877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1117
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/217 (42%), Positives = 127/217 (58%), Gaps = 19/217 (8%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINL----PDEVYYKDPVLRP-------Y 49
++L+ QYRMHP I +PSR FY G L DS V ++ DEV ++R Y
Sbjct: 844 LVLNTQYRMHPSICLYPSRQFYGGALKDSVRVSSMQSIFTDEVCVGGIIIRGCRFKLGHY 903
Query: 50 VFFDVIHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLK 109
F DV G E S N +EA + E + K L S GL K VG+ITPY Q
Sbjct: 904 CFMDVGWGTEREELVGHSRANFEEALVVCNVVESVVKGLIS-GL-KPNVGVITPYIAQRG 961
Query: 110 CLQHEF-RNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRA-SNHGVGFVADIRRMNVA 167
++ + R ++S + +NTVD FQG+E+DVI++SCVRA ++ G+GFV+D RRMNVA
Sbjct: 962 VIEGQLARRGIDSTACE---VNTVDGFQGREKDVIVLSCVRAMADRGLGFVSDERRMNVA 1018
Query: 168 LTRARRALWVMGNAGALTQ-SDDWAALIADSKARNCY 203
LTRA+ +L V+G+A L + S W +LI D++ R CY
Sbjct: 1019 LTRAKYSLIVVGHAETLQKWSPTWGSLIDDAQQRGCY 1055
>gi|363740551|ref|XP_415453.3| PREDICTED: probable helicase senataxin [Gallus gallus]
Length = 2713
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/230 (36%), Positives = 125/230 (54%), Gaps = 17/230 (7%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRL-TDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
L+VQYRMHP I FPS + Y L TD + N + +PY+ FDV G E
Sbjct: 2273 LTVQYRMHPDICLFPSSYIYDKTLKTDKATEENRCSSEW----PFQPYLVFDVGDGHEER 2328
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVL-N 120
S + N E K + + +++ K +GL ++ GIITPY Q K +Q E V N
Sbjct: 2329 DKDS--FSNPQEVKLVLEIIRTIKEKRKDLGLRRI--GIITPYSAQKKKIQEELDRVFKN 2384
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRA--SNHGVGFVADIRRMNVALTRARRALWVM 178
+ G+ ++TVDAFQG+E+D II++CVRA S +GF+A ++R+NV +TRAR +L+++
Sbjct: 2385 NSPGE---VDTVDAFQGREKDCIIVTCVRANSSKGSIGFLASLQRLNVTITRARFSLFIL 2441
Query: 179 GNAGALTQSDDWAALIADSKARNCYMDMD--SLPKEFSVALAAKAPGYGP 226
G L ++ DW LI D++ R + S K+ L K P P
Sbjct: 2442 GRLKTLMENKDWNKLIQDAQRRGAIIKTSDKSYKKDALKILKLKPPPQNP 2491
>gi|66361936|ref|XP_627932.1| sen1p/ NAM7 like superfamily I RNA helicase [Cryptosporidium parvum
Iowa II]
gi|46227554|gb|EAK88489.1| sen1p/ NAM7 like superfamily I RNA helicase [Cryptosporidium parvum
Iowa II]
Length = 994
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/238 (35%), Positives = 128/238 (53%), Gaps = 35/238 (14%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINL--PDEVYYKDPVLRPYVFFDVIHGR 58
++LSVQYRMHP I FPS+HFY G L D + ++ P + P+ +P+ FF V
Sbjct: 624 VMLSVQYRMHPQISAFPSKHFYDGELHDYKDILKTRAPVVTWQDIPIFKPFTFFSV--NS 681
Query: 59 ESHRGGSVSYQNVDEAKF--------GVCLYEHLQKTLKSMGLGKVT------VGIITPY 104
E +G S+S N+ EA F G+ LYEH +K ++ LG+ + + +I+PY
Sbjct: 682 EEEQGKSIS--NLLEADFVCQILELLGLILYEHQKKLTENTDLGEPSKRWYERIAVISPY 739
Query: 105 KLQLKCLQHEFRNV--LNSEEGKDLYINTVDAFQGQERDVIIMSCVRAS----------- 151
Q+K ++ + + L+ E + ++TVD FQGQE+D II S VR+
Sbjct: 740 NEQVKIIRKKIKEKFGLSPETICPIDVSTVDGFQGQEKDFIIFSVVRSQYIEEDSLNNAD 799
Query: 152 --NHGVGFVADIRRMNVALTRARRALWVMGNAGALTQSDDWAALIADSKARNCYMDMD 207
GF+AD RR+NVALTRA+ LW++GN+ L + +W +L S N +D
Sbjct: 800 NRKTNAGFIADRRRINVALTRAKYNLWIVGNSRYLLGNPEWRSLWDYSCKNNSQFSVD 857
>gi|414867534|tpg|DAA46091.1| TPA: hypothetical protein ZEAMMB73_362679 [Zea mays]
Length = 1444
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/208 (36%), Positives = 112/208 (53%), Gaps = 6/208 (2%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPD--EVYYKDPVLRPYVFFDVIHGRE 59
LL VQYRMHP I FP+ +FY R++D ++ D + Y P+ Y F + + E
Sbjct: 730 LLEVQYRMHPSISKFPNSNFYDNRISDG-PIVRQEDYAKSYLPGPIYGAYSFIHIDNDME 788
Query: 60 SHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVL 119
S +N+ E + E L K + + +VGII+PY Q+ LQ
Sbjct: 789 MLDSLGQSSKNMAEVAVAANIVERLAKEC-TEKRQRTSVGIISPYTAQVIALQDRLGRKF 847
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVM 178
+ + + ++D FQG E D+I++S VR++ G VGF++D R+NVALTRA+ LW++
Sbjct: 848 EKHDFLSVTVKSIDGFQGGEEDIILISTVRSNKDGKVGFLSDSGRINVALTRAKYCLWIL 907
Query: 179 GNAGALTQSDD-WAALIADSKARNCYMD 205
GN L S+ WA L+ DSK R C+ D
Sbjct: 908 GNGTTLLASNSIWADLVRDSKRRRCFFD 935
>gi|328866870|gb|EGG15253.1| hypothetical protein DFA_10087 [Dictyostelium fasciculatum]
Length = 854
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/214 (40%), Positives = 124/214 (57%), Gaps = 10/214 (4%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLR-PYVFFDVIHGRE 59
LL+ QYRMH I DFP HFY G L + + NL + K P + P VF D+ +GRE
Sbjct: 519 FLLNTQYRMHSSISDFPRHHFYNGLLNNGTNDSNLKIPIGIKWPQIDFPVVFIDISNGRE 578
Query: 60 SHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVL 119
+ S+ Y N +EA V + E L + +S L + +GIITPY Q+K + F N
Sbjct: 579 EIKHHSL-YNN-EEAVAVVQVAESLLENDES--LFRNNIGIITPYHAQVKHINQVFSND- 633
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVM 178
S G + TVD++QG+E DVII S VR++ G +GF+ D RR+NV++TRA+R L V+
Sbjct: 634 KSWRGAQPSVATVDSYQGREMDVIIFSTVRSNTKGNIGFLKDWRRLNVSITRAKRGLVVI 693
Query: 179 GNAGALTQSDD--WAALIADSKARNCYM-DMDSL 209
GN G + S D W A + +K +N + +DS+
Sbjct: 694 GNFGTINNSSDEHWKAYVQWAKDKNIMVKSLDSI 727
>gi|66805537|ref|XP_636490.1| hypothetical protein DDB_G0288923 [Dictyostelium discoideum AX4]
gi|74852418|sp|Q54I89.1|RENT1_DICDI RecName: Full=Regulator of nonsense transcripts 1; AltName:
Full=Up-frameshift suppressor 1 homolog
gi|60464869|gb|EAL62985.1| hypothetical protein DDB_G0288923 [Dictyostelium discoideum AX4]
Length = 1331
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 89/256 (34%), Positives = 137/256 (53%), Gaps = 19/256 (7%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESHR 62
L++QYRMHP + +FPS Y+G+L S + + + P + +FF G E
Sbjct: 768 LTIQYRMHPSLTEFPSNTSYEGQLVSELSHTDRDSQSKFPWPQPKDPMFFFNCTGSEEIS 827
Query: 63 GGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV--LN 120
S+ N EA +C E + +G +GIITPY+ Q + + LN
Sbjct: 828 SSGTSFINTTEA--SIC--EKIVTKFLELGSLPGQIGIITPYEGQRAYITSHMQKSGKLN 883
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVMG 179
E K + + +VD+FQG+E+D II+SCVR++++ G+GF+ D RR+NVALTRAR L ++G
Sbjct: 884 LELYKSIEVASVDSFQGREKDYIILSCVRSNDYQGIGFLQDPRRLNVALTRARFGLIILG 943
Query: 180 NAGALTQSDDWAALIADSKARNCYMD--MDSLPKEFSVALAAKAPGYGPLQGKIPHNARG 237
NA L++ W +LI+ K +N ++ + +L K+ V L YG QGK+P
Sbjct: 944 NAKVLSKDPLWNSLISHFKNKNVLVEGSLANL-KQSPVILQKPKKLYG--QGKLP----- 995
Query: 238 LRSAGQRHRSFDMNME 253
GQ SF+ + E
Sbjct: 996 --IPGQNSNSFNYDRE 1009
>gi|449664168|ref|XP_002168656.2| PREDICTED: uncharacterized protein LOC100204258 [Hydra
magnipapillata]
Length = 3199
Score = 131 bits (330), Expect = 5e-28, Method: Composition-based stats.
Identities = 72/203 (35%), Positives = 113/203 (55%), Gaps = 17/203 (8%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
+LL+ QYRM P I FP++ FY L +E++I K L+PYVF ++ RE
Sbjct: 1502 ILLNYQYRMAPEICWFPNKRFYNNELKSNEALIK-------KKSDLKPYVFLNLDESRED 1554
Query: 61 H-RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVL 119
R G + E +C +K + + +ITPY+ Q ++ E L
Sbjct: 1555 KTRMGGIHNPVEREHIIAIC-----EKIVTEKNANVNEIAVITPYRYQASLIKQELNKKL 1609
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH--GVGFVADIRRMNVALTRARRALWV 177
EG + ++T+D FQG+E+ ++I SCVRASNH +GF+++ +RMNVALTRA+ L +
Sbjct: 1610 AQLEG--IEVDTIDGFQGREKRIVIFSCVRASNHQESIGFLSNPQRMNVALTRAKDVLII 1667
Query: 178 MGNAGALTQSDDWAALIADSKAR 200
+ N ++ +DW AL+ D+K+R
Sbjct: 1668 LANCNSIEIDEDWKALVDDAKSR 1690
>gi|359490546|ref|XP_002267062.2| PREDICTED: uncharacterized protein LOC100262126 [Vitis vinifera]
Length = 1095
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 83/237 (35%), Positives = 127/237 (53%), Gaps = 21/237 (8%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKD----PVLRPYVFFDVIHG 57
LL++QYRMHP I FP++ FY+ +++D+ N+ D Y K + PY F +V +G
Sbjct: 697 LLNIQYRMHPSISFFPNKEFYENQISDAP---NVKDRSYEKQFLQGSMYGPYSFVNVAYG 753
Query: 58 R---ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHE 114
+ E+H ++ V E + K KV+VG+I+PYK Q+ +Q +
Sbjct: 754 KEEFENHSSRNMVEVAVVSEVVTSLFKESVSKK------QKVSVGVISPYKAQVIAIQEK 807
Query: 115 FRNVLNSEEGKDLYIN--TVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRA 171
+ N++E +D + TVD FQG E DVII+S VR + G VGF++ +R NV+LTRA
Sbjct: 808 LGKIYNTDEERDFSVKVCTVDGFQGGEEDVIIISTVRGNEKGLVGFLSKRQRANVSLTRA 867
Query: 172 RRALWVMGNAGALTQSDD-WAALIADSKARNCYMDMDSLPKEFSVALAAKAPGYGPL 227
R LW+ G + L S W ++ D+K R C+ + S K + A+A G L
Sbjct: 868 RHCLWIFGESETLVASGTVWKRVVEDAKERGCFYNA-SAEKNLAQAMAISLVEQGQL 923
>gi|357460649|ref|XP_003600606.1| DNA polymerase alpha-associated DNA helicase A [Medicago
truncatula]
gi|355489654|gb|AES70857.1| DNA polymerase alpha-associated DNA helicase A [Medicago
truncatula]
Length = 950
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 79/214 (36%), Positives = 123/214 (57%), Gaps = 14/214 (6%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLP-DEVYYKDPVLRPYVFFDVIHGRES 60
LL+ QYRMHP I FP++ FY+ +L D+ V + + + + + Y F ++ G+E
Sbjct: 672 LLNTQYRMHPSISLFPNKEFYEEQLVDAPIVREMSYNRCFLEGKMYASYSFINIAKGKE- 730
Query: 61 HRGGSVSYQNVDEA----KFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFR 116
RG S +N+ EA K L E +T K KV++GII+PY Q+ +Q + +
Sbjct: 731 QRGRGHSSKNMVEAAVISKIIGSLKEEFHRTRK-----KVSIGIISPYNAQVYEIQEKIK 785
Query: 117 -NVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRA 174
N S+ + + +VD FQG E D+II+S VR++ +GF+++ +R NVALTRAR
Sbjct: 786 PNNSISDPNFSVSVRSVDGFQGGEEDIIIISTVRSNEDAKIGFLSNRQRANVALTRARHC 845
Query: 175 LWVMGNAGALTQSDD-WAALIADSKARNCYMDMD 207
LW++GN L +SD W L+ D+K R C+ + D
Sbjct: 846 LWILGNETTLEKSDSIWKELVLDAKERGCFHNAD 879
>gi|312373027|gb|EFR20858.1| hypothetical protein AND_18385 [Anopheles darlingi]
Length = 1161
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 76/195 (38%), Positives = 111/195 (56%), Gaps = 7/195 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESHR 62
L VQYRMHP + FPS FY+G L + +V + P +FF V G+E
Sbjct: 685 LEVQYRMHPELSQFPSNFFYEGSLQNGVCADERKLKVDFPWPSPDCPMFFLVTQGQEEIA 744
Query: 63 GGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVLN 120
G SY N EA E + G+ +GIITPY+ Q L +++ L+
Sbjct: 745 GSGTSYLNRTEASN----VEKITTRFLKAGIKPEQIGIITPYEGQRAYLVQYMQYQGSLH 800
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVMG 179
S+ +++ I +VDAFQG+E+D+IIMSCVRA+ H G+GF+ D RR+NVALTRA+ + ++G
Sbjct: 801 SKLYQEIEIASVDAFQGREKDIIIMSCVRANEHQGIGFLNDPRRLNVALTRAKYGIIIVG 860
Query: 180 NAGALTQSDDWAALI 194
N L++ + W L+
Sbjct: 861 NPKVLSKQELWNHLL 875
>gi|71016830|ref|XP_758928.1| hypothetical protein UM02781.1 [Ustilago maydis 521]
gi|46098459|gb|EAK83692.1| hypothetical protein UM02781.1 [Ustilago maydis 521]
Length = 3036
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 75/200 (37%), Positives = 115/200 (57%), Gaps = 6/200 (3%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LLS+QYRMHP I FPS+ FY +L D ++ L + ++K + RP+ F +
Sbjct: 1787 LLSIQYRMHPEISVFPSKAFYDSKLQDGPNMAQLTRQPWHKFELTRPFKFLSIKAPESPG 1846
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
R S+ N +EA + LYE L+ S +G++T YK Q+ L+ F+
Sbjct: 1847 RMHSII--NREEANVALALYERLRIDNPSENFD-YRIGVVTMYKAQVFELKRTFQQRYGL 1903
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVR--ASNHGVGFVADIRRMNVALTRARRALWVMG 179
+ + + NTVD FQGQE+D+II+SCVR A +GF++D RR+NVA+TRA+ L+++G
Sbjct: 1904 DIVERIDFNTVDGFQGQEKDIIILSCVRSAAEPRSIGFLSDQRRLNVAVTRAKSNLFIIG 1963
Query: 180 NAGALTQSDD-WAALIADSK 198
NA L + D W L+ ++
Sbjct: 1964 NAEHLRRGDPIWDRLVTTAE 1983
>gi|302143702|emb|CBI22563.3| unnamed protein product [Vitis vinifera]
Length = 956
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 83/237 (35%), Positives = 127/237 (53%), Gaps = 21/237 (8%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKD----PVLRPYVFFDVIHG 57
LL++QYRMHP I FP++ FY+ +++D+ N+ D Y K + PY F +V +G
Sbjct: 559 LLNIQYRMHPSISFFPNKEFYENQISDAP---NVKDRSYEKQFLQGSMYGPYSFVNVAYG 615
Query: 58 R---ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHE 114
+ E+H ++ V E + K KV+VG+I+PYK Q+ +Q +
Sbjct: 616 KEEFENHSSRNMVEVAVVSEVVTSLFKESVSKK------QKVSVGVISPYKAQVIAIQEK 669
Query: 115 FRNVLNSEEGKDLYIN--TVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRA 171
+ N++E +D + TVD FQG E DVII+S VR + G VGF++ +R NV+LTRA
Sbjct: 670 LGKIYNTDEERDFSVKVCTVDGFQGGEEDVIIISTVRGNEKGLVGFLSKRQRANVSLTRA 729
Query: 172 RRALWVMGNAGALTQSDD-WAALIADSKARNCYMDMDSLPKEFSVALAAKAPGYGPL 227
R LW+ G + L S W ++ D+K R C+ + S K + A+A G L
Sbjct: 730 RHCLWIFGESETLVASGTVWKRVVEDAKERGCFYNA-SAEKNLAQAMAISLVEQGQL 785
>gi|224143928|ref|XP_002336092.1| predicted protein [Populus trichocarpa]
gi|222872079|gb|EEF09210.1| predicted protein [Populus trichocarpa]
Length = 1079
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 77/213 (36%), Positives = 117/213 (54%), Gaps = 13/213 (6%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLR-----PYVFFDVIH 56
LL+ QYRMHP I FP++ FY + D+ +V E Y+ L+ PY F +V +
Sbjct: 699 LLNTQYRMHPSISLFPNKEFYDMLIQDASNV----KERNYQKQFLQGNMYGPYSFINVAN 754
Query: 57 GRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFR 116
G+E G S +N+ E + L K K ++++G+I+PY Q+ +Q +
Sbjct: 755 GKEQSNDGR-SKKNLVEVAVVSAIVAGLFKEFKR-ARKRMSIGVISPYNAQVYAIQQKIG 812
Query: 117 NVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRAL 175
N ++ + + +VD FQG E DVII+S VR + G VGF+++ +R NVALTRAR L
Sbjct: 813 NTYSTFSDFAVNVRSVDGFQGSEEDVIIISTVRCNASGSVGFLSNRQRANVALTRARYCL 872
Query: 176 WVMGNAGALTQSDD-WAALIADSKARNCYMDMD 207
W++GN L S W L+ D+K R C+ + D
Sbjct: 873 WILGNGATLVNSGSIWKKLVTDAKERGCFYNAD 905
>gi|218195424|gb|EEC77851.1| hypothetical protein OsI_17107 [Oryza sativa Indica Group]
Length = 1011
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 123/214 (57%), Gaps = 18/214 (8%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-------LPDEVYYKDPVLRPYVFFDV 54
LL++QYRM P I FP FY G+++D +V++ LP +++ PY F +V
Sbjct: 699 LLNIQYRMRPEISKFPVASFYDGKISDGPNVVSKNYKRNILPGKMF------GPYSFINV 752
Query: 55 IHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLG-KVTVGIITPYKLQLKCLQH 113
G E+ S +N E + + L + +S+ LG K+TVG+++PY Q++ +Q
Sbjct: 753 DGGHETTEKHGRSLKNTIEVAAVLWIVRRLFE--ESVFLGSKLTVGVVSPYNAQVRAIQE 810
Query: 114 EFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRAR 172
+ + +G + + +VD FQG E DVII+S VR++ G VGF+ +++R NVALTRA+
Sbjct: 811 KIGKTYDMYDGFSVKVKSVDGFQGAEEDVIIISTVRSNRAGSVGFLTNLQRTNVALTRAK 870
Query: 173 RALWVMGNAGALTQSDD-WAALIADSKARNCYMD 205
LW++GN L+ + W ++ D+K R C+ +
Sbjct: 871 HCLWIVGNGTTLSNNRSVWQKVVNDAKHRGCFFE 904
>gi|357621770|gb|EHJ73491.1| putative nonsense-mediated mrna decay protein 1 [Danaus plexippus]
Length = 1037
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 85/208 (40%), Positives = 120/208 (57%), Gaps = 20/208 (9%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESV-------INLPDEVYYKDPVLRPYVFFDVI 55
L VQYRMHP + FPS FY+G L + S I+ P + P RP +FF V
Sbjct: 679 LEVQYRMHPELSRFPSDFFYEGSLQNGVSAEERRLHKIDFP----WPRPD-RP-MFFYVT 732
Query: 56 HGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCL-QH- 113
G+E G SY N EA E L G+ +GIITPY+ Q L QH
Sbjct: 733 QGQEEIAGSGTSYLNRTEAAN----VEKLTTRFLKAGVRPEQIGIITPYEGQRSYLVQHM 788
Query: 114 EFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRAR 172
+++ L+++ +++ + +VDAFQG+E+D+IIMSCVR++ H G+GF++D RR+NVALTRA+
Sbjct: 789 QYQGSLHAKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLSDPRRLNVALTRAK 848
Query: 173 RALWVMGNAGALTQSDDWAALIADSKAR 200
L V+GN L++ W L+A K R
Sbjct: 849 YGLIVVGNPKVLSKQPLWNHLLAFYKER 876
>gi|38346803|emb|CAD41371.2| OSJNBa0088A01.10 [Oryza sativa Japonica Group]
Length = 890
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 78/209 (37%), Positives = 120/209 (57%), Gaps = 9/209 (4%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDE-VYYKDPVLRPYVFFDVIHGRES 60
LL++QYRMHP I FP+ FY ++ D +V ++ E + + + PY F ++ +GRE
Sbjct: 637 LLNMQYRMHPSISIFPNFSFYDKKILDGPNVTHVRHERSFLQGAMFGPYSFINIENGRED 696
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
+ +N+ E + +L K G G V+VGII PY Q++ +Q N
Sbjct: 697 P---GRNKRNMAEVAAIKKILHNLCKACVGTGEG-VSVGIICPYAAQVEAIQSGIDA--N 750
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVMG 179
+ D+ +N+VD FQG E D+II+S VR+++ G +GF+++ RR NVALTRAR LW++G
Sbjct: 751 AVRPLDVRVNSVDGFQGSEEDIIILSTVRSNSTGSIGFLSNRRRANVALTRARHCLWILG 810
Query: 180 NAGALTQSDD-WAALIADSKARNCYMDMD 207
+A L S W L+ D+ R C+ D D
Sbjct: 811 DAATLLGSGSVWGELVRDAVDRRCFYDWD 839
>gi|222629429|gb|EEE61561.1| hypothetical protein OsJ_15909 [Oryza sativa Japonica Group]
Length = 889
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 78/209 (37%), Positives = 120/209 (57%), Gaps = 9/209 (4%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDE-VYYKDPVLRPYVFFDVIHGRES 60
LL++QYRMHP I FP+ FY ++ D +V ++ E + + + PY F ++ +GRE
Sbjct: 636 LLNMQYRMHPSISIFPNFSFYDKKILDGPNVTHVRHERSFLQGAMFGPYSFINIENGRED 695
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
+ +N+ E + +L K G G V+VGII PY Q++ +Q N
Sbjct: 696 P---GRNKRNMAEVAAIKKILHNLCKACVGTGEG-VSVGIICPYAAQVEAIQSGIDA--N 749
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVMG 179
+ D+ +N+VD FQG E D+II+S VR+++ G +GF+++ RR NVALTRAR LW++G
Sbjct: 750 AVRPLDVRVNSVDGFQGSEEDIIILSTVRSNSTGSIGFLSNRRRANVALTRARHCLWILG 809
Query: 180 NAGALTQSDD-WAALIADSKARNCYMDMD 207
+A L S W L+ D+ R C+ D D
Sbjct: 810 DAATLLGSGSVWGELVRDAVDRRCFYDWD 838
>gi|414585753|tpg|DAA36324.1| TPA: hypothetical protein ZEAMMB73_446301 [Zea mays]
Length = 1465
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 119/207 (57%), Gaps = 4/207 (1%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLP-DEVYYKDPVLRPYVFFDVIHGRES 60
LL++QYRMHP I FP FY G+L+D +V + ++++ + RPY F ++ E+
Sbjct: 888 LLNIQYRMHPDISRFPVGTFYDGKLSDGPNVSHKDYNKMFLAGKLFRPYSFINIDGSHET 947
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
+ S +N E V + + L K S K+++G++ PY Q++ +Q +
Sbjct: 948 NEMHGRSLKNSLEVDAVVMIVQSLLKETLSTR-SKLSIGVVCPYNAQVRAIQEKVGKPCR 1006
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVMG 179
+ + + +VD FQG E D+II+S VR++ G VGF+++++R NVALTRA+ LW++G
Sbjct: 1007 KYDYFSVKVKSVDGFQGAEEDIIIISTVRSNGAGTVGFLSNLQRTNVALTRAKHCLWIVG 1066
Query: 180 NAGALTQSDD-WAALIADSKARNCYMD 205
N L S+ W ++ D++ R C+ +
Sbjct: 1067 NGTTLFNSNSVWQKIVKDTRDRGCFFN 1093
>gi|218195426|gb|EEC77853.1| hypothetical protein OsI_17109 [Oryza sativa Indica Group]
Length = 1402
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 113/203 (55%), Gaps = 4/203 (1%)
Query: 8 RMHPHIRDFPSRHFYQGRLTDSESVINLPDE-VYYKDPVLRPYVFFDVIHGRESHRGGSV 66
RMHP I FP FY G+++D +V + E + + PY F +V G E+
Sbjct: 1025 RMHPEISRFPVATFYDGKISDGSNVTSKNYERKFLASKIFGPYSFINVDGGHETTEKNCR 1084
Query: 67 SYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNSEEGKD 126
S +N E + + + L K S K++VG+++PY Q++ +Q + N +G
Sbjct: 1085 SLKNTIEVATVLRIVQRLFKEAVSTQ-SKLSVGVVSPYNAQVRAIQEKVGKSYNMYDGFS 1143
Query: 127 LYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVMGNAGALT 185
+ + +VD FQG E D+II+S VR++ G VGF+ +++R NVALTRA+ LW++GN L+
Sbjct: 1144 VKVKSVDGFQGAEEDIIIISTVRSNGAGSVGFLTNLQRTNVALTRAKHCLWIVGNGTTLS 1203
Query: 186 QSDD-WAALIADSKARNCYMDMD 207
S W +I D++ R C+ D +
Sbjct: 1204 NSKSIWQKIIKDAQDRGCFFDAN 1226
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 91/160 (56%), Gaps = 3/160 (1%)
Query: 50 VFFDVIHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLK 109
VF + G E+ S +N E + + + L K S K++VG+++PY Q++
Sbjct: 766 VFERLNGGHETTEKNCRSLKNTIEVATVLRIVQRLFKEAVSTQ-SKLSVGVVSPYNAQVR 824
Query: 110 CLQHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVAL 168
+Q + N +G + + +VD FQG E D+II+S VR++ G VGF+ +++R NVAL
Sbjct: 825 AIQEKVGKSYNMYDGFSVKVKSVDGFQGAEEDIIIISTVRSNGAGSVGFLTNLQRTNVAL 884
Query: 169 TRARRALWVMGNAGALTQSDD-WAALIADSKARNCYMDMD 207
TRA+ LW++GN L+ S W +I D++ R C+ D +
Sbjct: 885 TRAKHCLWIVGNGTTLSNSKSIWQKIIKDAQDRGCFFDAN 924
>gi|124087769|ref|XP_001346867.1| TRNA-splicing endonuclease positive effector [Paramecium
tetraurelia strain d4-2]
gi|145474903|ref|XP_001423474.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|50057256|emb|CAH03240.1| TRNA-splicing endonuclease positive effector, putative [Paramecium
tetraurelia]
gi|124390534|emb|CAK56076.1| unnamed protein product [Paramecium tetraurelia]
Length = 1124
Score = 130 bits (328), Expect = 7e-28, Method: Composition-based stats.
Identities = 81/205 (39%), Positives = 117/205 (57%), Gaps = 17/205 (8%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN--LPDEVYYKDPVLRPYVFFDVIHGRE 59
L +QYRMHP IR+FPS +FY +L D SV +P+ ++ VL F DV
Sbjct: 792 FLDMQYRMHPQIREFPSLNFYDNKLIDHFSVYERLIPNN-FFNQRVL----FIDV---ES 843
Query: 60 SHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVL 119
S+QN E V + ++++ S LG +I YK Q++ ++ E + L
Sbjct: 844 EETKDEKSFQNQTECNMIVEVLKNIKNAYPSQSLG-----VICAYKAQVRLIKLEIKRQL 898
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVM 178
+ ++ INTVD+FQGQERDVI+ SCVR+S+ G +GF+ D RR+NVALTRA+ AL++
Sbjct: 899 -GDLMDEIQINTVDSFQGQERDVILFSCVRSSSSGNIGFLQDGRRVNVALTRAKNALFIF 957
Query: 179 GNAGALTQSDDWAALIADSKARNCY 203
GNA L Q W L+ + +R Y
Sbjct: 958 GNAITLGQCQLWKNLLLNLHSRKLY 982
>gi|440291801|gb|ELP85043.1| splicing endonuclease positive effector sen1, putative [Entamoeba
invadens IP1]
Length = 1569
Score = 130 bits (328), Expect = 8e-28, Method: Composition-based stats.
Identities = 80/196 (40%), Positives = 112/196 (57%), Gaps = 17/196 (8%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL+ QYRM IR+FPS FY+GRL D + + + V +F +V G+E
Sbjct: 557 LLTQQYRMESKIREFPSNEFYEGRLADGVKIEKI-------NSVSNSVLFLNVC-GKEDR 608
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
G S N +E K V L + K ++ + +GIITPY+ Q+ ++ + + +
Sbjct: 609 LGKESSLFNTEEVKAVVFLLTEISKNVECV---HWDIGIITPYRKQVLDVK---KAIEQN 662
Query: 122 EEGKDL--YINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
E K L +NTVD FQG+E D++IMSCVR+S H G+GFV D RR+NVA+TRA+RAL V+
Sbjct: 663 EVAKSLNVLVNTVDGFQGREFDIVIMSCVRSSEHNGIGFVEDERRLNVAITRAKRALCVV 722
Query: 179 GNAGALTQSDDWAALI 194
GN L Q W I
Sbjct: 723 GNIKTLRQVKVWEDYI 738
>gi|67596220|ref|XP_666063.1| SEN1 protein [Cryptosporidium hominis TU502]
gi|54656975|gb|EAL35833.1| SEN1 protein [Cryptosporidium hominis]
Length = 994
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 85/238 (35%), Positives = 127/238 (53%), Gaps = 35/238 (14%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINL--PDEVYYKDPVLRPYVFFDVIHGR 58
++LSVQYRMHP I FPS+HFY G L D + ++ P + P+ +P+ FF V
Sbjct: 624 VMLSVQYRMHPQISAFPSKHFYDGELHDYKDILETRAPVVAWQDIPIFKPFTFFSV--NS 681
Query: 59 ESHRGGSVSYQNVDEAKF--------GVCLYEHLQKTLKSMGLGKVT------VGIITPY 104
E +G S+S N EA F G+ LYEH +K ++ LG+ + + +I+PY
Sbjct: 682 EEEQGKSIS--NPLEADFVCQILELLGLILYEHQKKLTENTDLGEPSKRWYERIAVISPY 739
Query: 105 KLQLKCLQHEFRNV--LNSEEGKDLYINTVDAFQGQERDVIIMSCVRAS----------- 151
Q+K ++ + + L+ E + ++TVD FQGQE+D II S VR+
Sbjct: 740 NEQVKIIRKKIKEKFGLSPETICPIDVSTVDGFQGQEKDFIIFSVVRSQYIEEDSLNNAD 799
Query: 152 --NHGVGFVADIRRMNVALTRARRALWVMGNAGALTQSDDWAALIADSKARNCYMDMD 207
GF+AD RR+NVALTRA+ LW++GN+ L + +W +L S N +D
Sbjct: 800 DRKTNAGFIADRRRINVALTRAKYNLWIVGNSRYLLGNPEWRSLWDYSCKNNSQFSVD 857
>gi|224108478|ref|XP_002333388.1| predicted protein [Populus trichocarpa]
gi|222836389|gb|EEE74796.1| predicted protein [Populus trichocarpa]
Length = 1087
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 78/214 (36%), Positives = 124/214 (57%), Gaps = 14/214 (6%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLR-----PYVFFDVIH 56
LL++QYRMHP I FP+ FY ++ D+ +V E Y+ L+ Y F ++ H
Sbjct: 647 LLNIQYRMHPSISLFPNTEFYGSQVLDAPNV----KETGYRRRFLQGDMFESYSFINLAH 702
Query: 57 GRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEF- 115
G+E S++N EA + L K + G KV++GII+PY+ Q+ +Q +
Sbjct: 703 GKEEFVEQR-SFKNTVEAAAAADIVGRLFKDINGTG-QKVSIGIISPYQAQVHAIQEKIG 760
Query: 116 RNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRA 174
+ + +S+ + + TVD FQG E D+II+S VR++ +G VGFV++ +R NVALTRAR
Sbjct: 761 KFISDSDSAFSVSVGTVDGFQGGEEDLIIISTVRSNENGSVGFVSNPQRANVALTRARFC 820
Query: 175 LWVMGNAGALTQSDD-WAALIADSKARNCYMDMD 207
LW++GN L +S W ++ D+K R C+ + +
Sbjct: 821 LWILGNEATLVRSGSIWKKIVNDAKHRQCFYNAE 854
>gi|347965371|ref|XP_322028.4| AGAP001133-PA [Anopheles gambiae str. PEST]
gi|333470541|gb|EAA01007.4| AGAP001133-PA [Anopheles gambiae str. PEST]
Length = 1161
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 76/195 (38%), Positives = 110/195 (56%), Gaps = 7/195 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESHR 62
L VQYRMHP + FPS FY+G L + +V + P +FF V G+E
Sbjct: 687 LEVQYRMHPELSQFPSNFFYEGSLQNGVCADERKLKVDFPWPSPDCPMFFLVTQGQEEIA 746
Query: 63 GGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVLN 120
G SY N EA E + G+ +GIITPY+ Q L +++ L+
Sbjct: 747 GSGTSYLNRTEASN----VEKITTRFLKAGIKPDQIGIITPYEGQRAYLVQYMQYQGSLH 802
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVMG 179
S+ +++ I +VDAFQG+E+D+IIMSCVRA+ H G+GF+ D RR+NVALTRA+ + ++G
Sbjct: 803 SKLYQEIEIASVDAFQGREKDIIIMSCVRANEHQGIGFLNDPRRLNVALTRAKYGIIIVG 862
Query: 180 NAGALTQSDDWAALI 194
N L + + W L+
Sbjct: 863 NPKVLAKQELWNHLL 877
>gi|452824582|gb|EME31584.1| dynamin GTPase [Galdieria sulphuraria]
Length = 1012
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 78/207 (37%), Positives = 115/207 (55%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINL-PDEVYYKDPVLRPYVFFDVIHGRESH 61
L++QYRMHP + +FPS FY+G L + + P V + PV FF V G E
Sbjct: 684 LTIQYRMHPSLTEFPSNMFYEGSLQNGITAAERKPSSVSFPWPVAAKPFFFYVQTGPEEV 743
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLK-CLQHEFRN-VL 119
S+ N EA + H K G+ +G+ITPY+ Q +QH R+ +
Sbjct: 744 SASGTSFLNRVEADAVEKIVSHFLKN----GVDPQRIGVITPYEGQRAFIVQHFLRSGTM 799
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
E K++ + +VDAFQG+E+D II+SCVR++ H G+GF++D RR+NVALTRAR L ++
Sbjct: 800 RLELYKEIEVASVDAFQGREKDFIILSCVRSNEHQGIGFLSDPRRLNVALTRARFGLIIL 859
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN L + WA L+ K + ++
Sbjct: 860 GNPKVLAKKWLWACLLQHCKENDVLVE 886
>gi|302761080|ref|XP_002963962.1| hypothetical protein SELMODRAFT_438696 [Selaginella moellendorffii]
gi|300167691|gb|EFJ34295.1| hypothetical protein SELMODRAFT_438696 [Selaginella moellendorffii]
Length = 2806
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/210 (41%), Positives = 123/210 (58%), Gaps = 21/210 (10%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY---YKDPVLRPYVFFDVIHG 57
++L+VQYRMHP I FP+ FY+G + D +V+ D+ Y + + PY F +V HG
Sbjct: 741 IMLNVQYRMHPSISQFPNFQFYEGAICDGPNVV---DDFYGQLSQSQLFGPYTFLNV-HG 796
Query: 58 RESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRN 117
E+ + S N E V + HL K L G K+ VGII+PY Q+K + +
Sbjct: 797 VET-KDEKHSKSNAVE----VLVVMHLLKMLHQSG-EKLQVGIISPYAAQVKAIN----D 846
Query: 118 VLNSEEGKDLYIN--TVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRA 174
L S + L IN +VD FQG+E+DVII+S VR++ G +GF+ D RR+NVA+TRAR
Sbjct: 847 RLKSWDHGSLSINCRSVDGFQGREKDVIILSTVRSNVGGYLGFLEDHRRLNVAITRARHV 906
Query: 175 LWVMGNAGALTQSDD-WAALIADSKARNCY 203
L ++GNA L SD W L+ D++ R CY
Sbjct: 907 LCIVGNANTLESSDGVWRQLLNDARHRKCY 936
>gi|270001378|gb|EEZ97825.1| hypothetical protein TcasGA2_TC000192 [Tribolium castaneum]
Length = 1095
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/210 (36%), Positives = 120/210 (57%), Gaps = 14/210 (6%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTD----SESVINLPDEVYYKDPVLRPYVFFDVIHGR 58
L VQYRMHP + FPS FY+G L + E +N ++ + PV+ +FF V G+
Sbjct: 674 LEVQYRMHPELSRFPSNFFYEGSLQNGVCADERKLN---KIDFPWPVIDRPMFFHVTQGQ 730
Query: 59 ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFR 116
E G SY N EA E + G+ +G+ITPY+ Q L +++
Sbjct: 731 EEIAGSGTSYLNRTEAAN----VEKIATRFLRSGVKPEQIGVITPYEGQRAYLVQYMQYQ 786
Query: 117 NVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRAL 175
L+S+ +++ I +VDAFQG+E+D+IIMSCVR++ H G+GF+ D RR+NVALTRA+ +
Sbjct: 787 GSLHSKTYQEIEIASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRLNVALTRAKYGI 846
Query: 176 WVMGNAGALTQSDDWAALIADSKARNCYMD 205
++GN L++ W L++ K + ++
Sbjct: 847 IIVGNPKVLSKQPLWNHLLSFYKEQKVLVE 876
>gi|189234959|ref|XP_973320.2| PREDICTED: similar to nonsense-mediated mrna decay protein 1
(rent1) [Tribolium castaneum]
Length = 1090
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/210 (36%), Positives = 120/210 (57%), Gaps = 14/210 (6%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTD----SESVINLPDEVYYKDPVLRPYVFFDVIHGR 58
L VQYRMHP + FPS FY+G L + E +N ++ + PV+ +FF V G+
Sbjct: 669 LEVQYRMHPELSRFPSNFFYEGSLQNGVCADERKLN---KIDFPWPVIDRPMFFHVTQGQ 725
Query: 59 ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFR 116
E G SY N EA E + G+ +G+ITPY+ Q L +++
Sbjct: 726 EEIAGSGTSYLNRTEAAN----VEKIATRFLRSGVKPEQIGVITPYEGQRAYLVQYMQYQ 781
Query: 117 NVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRAL 175
L+S+ +++ I +VDAFQG+E+D+IIMSCVR++ H G+GF+ D RR+NVALTRA+ +
Sbjct: 782 GSLHSKTYQEIEIASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRLNVALTRAKYGI 841
Query: 176 WVMGNAGALTQSDDWAALIADSKARNCYMD 205
++GN L++ W L++ K + ++
Sbjct: 842 IIVGNPKVLSKQPLWNHLLSFYKEQKVLVE 871
>gi|297805252|ref|XP_002870510.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297316346|gb|EFH46769.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 818
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 122/212 (57%), Gaps = 13/212 (6%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYK----DPVLRPYVFFDVIHG 57
L+VQYRMHP I FP++ FY G++ D+ N+ + +Y K + + F +V G
Sbjct: 574 FLNVQYRMHPSISRFPNKEFYGGKIKDAA---NVQESIYQKRFLQGNMFGSFSFINVGLG 630
Query: 58 RESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRN 117
E G S +N+ E + L K + K++VG+++PYK Q++ +Q +N
Sbjct: 631 EEEFGDGH-SPKNMVEVAVISEIISSLFKVSSERRI-KMSVGVVSPYKGQVRAIQERTKN 688
Query: 118 VLNSEEGKDLYIN--TVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRA 174
+S G+ +N +VD FQG E DVII+S VR++ +G VGF+ + +R NVALTRAR
Sbjct: 689 KYSSLSGELFTLNVRSVDGFQGGEEDVIIISTVRSNGNGKVGFLNNRQRANVALTRARHC 748
Query: 175 LWVMGNAGALTQSDD-WAALIADSKARNCYMD 205
LWV+GN L S WA LI++S+ R C+ D
Sbjct: 749 LWVVGNETTLALSGSIWAKLISESRTRGCFYD 780
>gi|15240114|ref|NP_198530.1| tRNA-splicing endonuclease positive effector-related protein
[Arabidopsis thaliana]
gi|332006763|gb|AED94146.1| tRNA-splicing endonuclease positive effector-related protein
[Arabidopsis thaliana]
Length = 692
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 121/211 (57%), Gaps = 12/211 (5%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYK----DPVLRPYVFFDVIHG 57
LL+VQYRMHP I FP++ FY GR+ D+ N+ + +Y K + + F +V G
Sbjct: 449 LLNVQYRMHPSISRFPNKEFYGGRIKDAA---NVQESIYQKRFLQGNMFGSFSFINVGRG 505
Query: 58 RESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRN 117
E G S +N+ E + +L K + K++VG+++PYK Q++ +Q N
Sbjct: 506 EEEFGDGH-SPKNMVEVAVISEIISNLFKVSSERRI-KMSVGVVSPYKGQVRAIQERTTN 563
Query: 118 VLNSEEGK-DLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRAL 175
+S G L + +VD FQG E D+II+S VR++ +G VGF+ + +R NVALTRAR L
Sbjct: 564 KYSSLSGLFTLNVRSVDGFQGGEEDIIIISTVRSNGNGKVGFLNNRQRANVALTRARHCL 623
Query: 176 WVMGNAGALTQS-DDWAALIADSKARNCYMD 205
WV+GN L S WA LI++S+ C+ D
Sbjct: 624 WVIGNETTLALSGSSWAKLISESRTLGCFYD 654
>gi|170053152|ref|XP_001862543.1| nonsense-mediated mRNA decay protein 1 [Culex quinquefasciatus]
gi|167873798|gb|EDS37181.1| nonsense-mediated mRNA decay protein 1 [Culex quinquefasciatus]
Length = 1136
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/195 (38%), Positives = 110/195 (56%), Gaps = 7/195 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESHR 62
L VQYRMHP + FPS FY+G L + +V + P +FF V G+E
Sbjct: 702 LEVQYRMHPELSQFPSNFFYEGSLQNGVCAEERKLKVDFPWPSPDTPMFFLVTQGQEEIA 761
Query: 63 GGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVLN 120
G SY N EA E + G+ +GIITPY+ Q L +++ L+
Sbjct: 762 GSGTSYLNRTEASN----VEKITTRFLKAGVKPEQIGIITPYEGQRAYLVQYMQYQGSLH 817
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVMG 179
S+ +++ I +VDAFQG+E+D+IIMSCVR++ H G+GF+ D RR+NVALTRA+ + ++G
Sbjct: 818 SKLYQEIEIASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRLNVALTRAKYGIIIVG 877
Query: 180 NAGALTQSDDWAALI 194
N L++ W L+
Sbjct: 878 NPKVLSKQQLWNHLL 892
>gi|10177997|dbj|BAB11370.1| unnamed protein product [Arabidopsis thaliana]
Length = 701
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 121/211 (57%), Gaps = 12/211 (5%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYK----DPVLRPYVFFDVIHG 57
LL+VQYRMHP I FP++ FY GR+ D+ N+ + +Y K + + F +V G
Sbjct: 458 LLNVQYRMHPSISRFPNKEFYGGRIKDAA---NVQESIYQKRFLQGNMFGSFSFINVGRG 514
Query: 58 RESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRN 117
E G S +N+ E + +L K + K++VG+++PYK Q++ +Q N
Sbjct: 515 EEEFGDGH-SPKNMVEVAVISEIISNLFKVSSERRI-KMSVGVVSPYKGQVRAIQERTTN 572
Query: 118 VLNSEEGK-DLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRAL 175
+S G L + +VD FQG E D+II+S VR++ +G VGF+ + +R NVALTRAR L
Sbjct: 573 KYSSLSGLFTLNVRSVDGFQGGEEDIIIISTVRSNGNGKVGFLNNRQRANVALTRARHCL 632
Query: 176 WVMGNAGALTQS-DDWAALIADSKARNCYMD 205
WV+GN L S WA LI++S+ C+ D
Sbjct: 633 WVIGNETTLALSGSSWAKLISESRTLGCFYD 663
>gi|449487923|ref|XP_004157868.1| PREDICTED: uncharacterized protein LOC101231306 [Cucumis sativus]
Length = 1768
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 115/207 (55%), Gaps = 4/207 (1%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVI-NLPDEVYYKDPVLRPYVFFDVIHGRES 60
LL+ QYRMHP I FP+ FY ++ D+ V+ + + Y P+ PY F +V G+E
Sbjct: 737 LLNTQYRMHPSISCFPNSKFYSNQILDAPLVMAEVHKKCYIPSPMFGPYSFINVSVGKEE 796
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
S +N E + + E L K + ++ VG+I+ Y Q+ +Q +
Sbjct: 797 GDDDGYSKKNTVEVAVVIKIIEKLYKAWRGAK-TRLNVGVISFYAAQVSEIQSRLAHKYE 855
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVMG 179
+ + +VD FQG E DVII++ VR++ +GF++ +R+NVALTRAR LW++G
Sbjct: 856 KSHNFTVKVKSVDGFQGGEEDVIILTTVRSNRRKNIGFISSSQRINVALTRARHCLWIVG 915
Query: 180 NAGALTQSD-DWAALIADSKARNCYMD 205
+A L S+ +W A+++D+K R CY +
Sbjct: 916 DATTLGNSNSEWEAVVSDAKDRQCYFN 942
>gi|149237651|ref|XP_001524702.1| ATP-dependent helicase NAM7 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146451299|gb|EDK45555.1| ATP-dependent helicase NAM7 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 977
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/242 (37%), Positives = 128/242 (52%), Gaps = 14/242 (5%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDS-ESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + +FPS FY+G L + S L +E + PVL + F +GRE
Sbjct: 635 LEVQYRMHPCLSEFPSNMFYEGSLQNGVTSKDRLVEEAMFPWPVLDTPMMFWANYGREEL 694
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
G SY N EA E + L G+ +G+ITPY+ Q L
Sbjct: 695 SGSGNSYLNRVEAMN----VERIITRLFKDGIKPEQIGVITPYEGQRAYLVQFMSINSTI 750
Query: 122 EEGKDLY----INTVDAFQGQERDVIIMSCVRASN-HGVGFVADIRRMNVALTRARRALW 176
+ +D Y I +VDAFQG+E+D II+SCVRA++ +GF++D RR+NVALTRA+ L
Sbjct: 751 LDKRDQYLEVEITSVDAFQGREKDFIILSCVRANDSQSIGFLSDPRRLNVALTRAKYGLL 810
Query: 177 VMGNAGALTQSDDWAALIADSKARNCYMD--MDSLPKEFSVALAAKAP-GYGPLQGKIPH 233
++GN AL ++ W L+ + + C +D +D+L V L AP P Q K+P
Sbjct: 811 ILGNPRALCRNKLWNHLLIHFREKGCLVDGPLDNLQLSM-VQLNNYAPRNVKPGQKKVPF 869
Query: 234 NA 235
A
Sbjct: 870 AA 871
>gi|157130590|ref|XP_001661931.1| nonsense-mediated mrna decay protein 1 (rent1) [Aedes aegypti]
gi|108871854|gb|EAT36079.1| AAEL011817-PA [Aedes aegypti]
Length = 1121
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/195 (38%), Positives = 110/195 (56%), Gaps = 7/195 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESHR 62
L VQYRMHP + FPS FY+G L + +V + P +FF V G+E
Sbjct: 690 LEVQYRMHPELSQFPSNFFYEGSLQNGVCAEERKLKVDFPWPSPDTPMFFLVTQGQEEIA 749
Query: 63 GGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVLN 120
G SY N EA E + G+ +GIITPY+ Q L +++ L+
Sbjct: 750 GSGTSYLNRTEASN----VEKITTRFLKAGVKPDQIGIITPYEGQRAYLVQYMQYQGSLH 805
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVMG 179
S+ +++ I +VDAFQG+E+D+IIMSCVR++ H G+GF+ D RR+NVALTRA+ + ++G
Sbjct: 806 SKLYQEIEIASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRLNVALTRAKYGIIIVG 865
Query: 180 NAGALTQSDDWAALI 194
N L++ W L+
Sbjct: 866 NPKVLSKQQLWNHLL 880
>gi|15607027|ref|NP_214409.1| DNA helicase [Aquifex aeolicus VF5]
gi|2984278|gb|AAC07803.1| DNA helicase [Aquifex aeolicus VF5]
Length = 530
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 124/219 (56%), Gaps = 25/219 (11%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN------LPDEVYYKDP-----VLRP-- 48
+L +QYRM+ I +F ++ FY+G+L +SV N + E + P VL P
Sbjct: 323 ILRIQYRMNKKIMEFSNKMFYEGKLIADKSVENHTIKDLINPEKLKEIPEPFKSVLEPEK 382
Query: 49 YVFFDVIHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQL 108
V F + G+E R GS S+ N +EAK V + E+L K +GL +G+I+PY+ Q+
Sbjct: 383 VVVFINVRGKEKQRRGSTSFYNEEEAKVAVKIVEYLMK----IGLRSEHIGVISPYEDQV 438
Query: 109 KCLQHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVA 167
L+ ++ ++ + TVD FQG+E++VII+S VR++ G +GF+ D RR+NVA
Sbjct: 439 NFLEELLKDF-------EVEVKTVDGFQGREKEVIIISFVRSNEKGEIGFLKDYRRLNVA 491
Query: 168 LTRARRALWVMGNAGALTQSDDWAALIADSKARNCYMDM 206
LTRARR L +GN L+ + + I K+ Y+++
Sbjct: 492 LTRARRKLITLGNEKTLSSDEVYKQFIGYVKSIGGYINI 530
>gi|297603234|ref|NP_001053657.2| Os04g0582000 [Oryza sativa Japonica Group]
gi|38346797|emb|CAD41365.2| OSJNBa0088A01.4 [Oryza sativa Japonica Group]
gi|255675717|dbj|BAF15571.2| Os04g0582000 [Oryza sativa Japonica Group]
Length = 813
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 122/214 (57%), Gaps = 18/214 (8%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-------LPDEVYYKDPVLRPYVFFDV 54
LL++QYRM P I FP FY G+++D +V++ LP +++ PY F +V
Sbjct: 562 LLNIQYRMRPEISKFPVASFYDGKISDGPNVVSKNYKRNILPGKMF------GPYSFINV 615
Query: 55 IHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLG-KVTVGIITPYKLQLKCLQH 113
G E+ S +N E + + L + +S+ LG K+TVG+++PY Q++ +Q
Sbjct: 616 DGGHETTEKHGRSLKNTIEVAAVLWIVRRLFE--ESVFLGSKLTVGVVSPYNAQVRAIQE 673
Query: 114 EFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRAR 172
+ + + + + +VD FQG E DVII+S VR++ G VGF+ +++R N+ALTRA+
Sbjct: 674 KIGKTYDMYDDFSVKVKSVDGFQGAEEDVIIISTVRSNRAGSVGFLTNLQRTNMALTRAK 733
Query: 173 RALWVMGNAGALTQSDD-WAALIADSKARNCYMD 205
LW++GN L+ S W ++ D+K R C+ +
Sbjct: 734 HCLWIVGNGTTLSNSRSVWQKVVNDAKHRGCFFE 767
>gi|340369264|ref|XP_003383168.1| PREDICTED: regulator of nonsense transcripts 1-like [Amphimedon
queenslandica]
Length = 1081
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/198 (39%), Positives = 121/198 (61%), Gaps = 8/198 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINL-PDEVYYKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + +FPS FY G L ++ S DEV + P + +FF G+E
Sbjct: 681 LEVQYRMHPALTEFPSSVFYDGTLQNAVSPEERRMDEVNFPWPNVDKPMFFWCSFGQEEI 740
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCL--QHEFRNVL 119
SY N EA V + + + K +K+ G+ V +G+ITPY+ Q + Q +F +
Sbjct: 741 SSSGTSYLNRTEA---VNVEKVVTKLMKN-GVKPVQIGVITPYEGQRAYVVQQMQFNGGM 796
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+S+ + L + +VDAFQG+E+D II+SCVR++ H G+GF+ D RR+NVALTRA+ + ++
Sbjct: 797 SSKLYEQLEVASVDAFQGREKDFIILSCVRSNEHQGIGFLNDARRLNVALTRAKYGVIII 856
Query: 179 GNAGALTQSDDWAALIAD 196
GNA L++++ W LI +
Sbjct: 857 GNAKVLSRNELWHHLIKE 874
>gi|297738290|emb|CBI27491.3| unnamed protein product [Vitis vinifera]
Length = 6100
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 125/232 (53%), Gaps = 26/232 (11%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLP-DEVYYKDPVLRPYVFFDVIHGRES 60
L++QYRMHP I FP +FY ++ D+ +V + ++ Y DPV RPY+F ++ GRE
Sbjct: 1908 FLNLQYRMHPSISLFPCSNFYANQILDAPNVKHKAYEKKYLPDPVFRPYLFINISCGREE 1967
Query: 61 HRGGSVSYQNVDE-------------------AKFGVCLYEHLQKTLKSMGLGK----VT 97
S +N+ E +K +C + + L ++ + +
Sbjct: 1968 VDEVGHSVKNMVEVAVLMKIVQNLYQESLAISSKRQLCFFLFVSIPLLALEIQSERTLLR 2027
Query: 98 VGIITPYKLQLKCLQHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VG 156
+G+++ Y Q+ +Q FR + + + + T+D FQG E D+I++S VRA+N G VG
Sbjct: 2028 IGVLSSYTAQVLEIQERFRQKYENNDRFSVKVQTIDGFQGGEEDIILISTVRANNFGSVG 2087
Query: 157 FVADIRRMNVALTRARRALWVMGNAGALTQSDD-WAALIADSKARNCYMDMD 207
+AD++ NVALTRAR LW++G+ L S+ W ++ D+K R+C ++ D
Sbjct: 2088 VMADVKITNVALTRARHGLWILGSERTLVMSETVWKDIVHDAKDRHCLLNAD 2139
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 133/247 (53%), Gaps = 4/247 (1%)
Query: 9 MHPHIRDFPSRHFYQGRLTDSESVINLP-DEVYYKDPVLRPYVFFDVIHGRESHRGGSVS 67
MHP I FP +FY ++ D+ +V + ++ Y DPV R Y+F ++ GRE S
Sbjct: 1 MHPSISLFPCSNFYANQILDAPNVKHKAYEKKYLPDPVFRLYLFINISCGREEVDEVGHS 60
Query: 68 YQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNSEEGKDL 127
+N+ E + + ++L + +S ++ +G+++PY Q+ +Q + + + +
Sbjct: 61 VKNMVEVAVLMKIVQNLYQAWRSGIKEELRIGVLSPYTAQVLEIQERLKQKYENNDMFSV 120
Query: 128 YINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVMGNAGALTQ 186
+ T+D FQG E D+I++S VRA+N G VG +AD++ NVALTRAR LW++G+ L
Sbjct: 121 KVQTIDGFQGGEEDIILISTVRANNFGSVGVMADVKITNVALTRARHCLWILGSERTLVM 180
Query: 187 SDD-WAALIADSKARNCYMDMDSLPKEFSVALAAKAPGYGPLQGKIPHNARGLRSAGQRH 245
S+ W ++ D+K R+C ++ D + KA + L + ++ SA +H
Sbjct: 181 SETVWKDIVHDAKDRHCLLNADEDCDLANTMFKVKAELH-ELDDLLNRDSSLFNSARWKH 239
Query: 246 RSFDMNM 252
R ++ M
Sbjct: 240 RELEIPM 246
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 75/209 (35%), Positives = 118/209 (56%), Gaps = 5/209 (2%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLP-DEVYYKDPVLRPYVFFDVIHGRES 60
LL+VQYRMHP I FP+ FY ++ D+ +V + + Y P+ Y F +V G+E
Sbjct: 4041 LLNVQYRMHPSISFFPNSKFYFNQILDAPNVKSKSYTKHYLSGPMFGSYSFINV-RGKEE 4099
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
H S +N+ E + + +L K K+++G+I+PY Q+ +Q
Sbjct: 4100 HDDVGKSRKNMIEVAIVIKIVGNLYKEWSGSN-QKLSIGVISPYAAQVVAVQDNLGEKYE 4158
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVMG 179
+ + + + TVD FQ E D+IIMS VRA++HG +GF+++ +R NVALTRAR LW++G
Sbjct: 4159 NLDNFAVKVKTVDGFQAGEEDIIIMSTVRANSHGSIGFLSNPQRTNVALTRARHCLWILG 4218
Query: 180 NAGALTQSDD-WAALIADSKARNCYMDMD 207
N L +S+ W L+ D+K R + + D
Sbjct: 4219 NERTLAKSESVWEDLVCDAKRRKRFFNAD 4247
>gi|19577367|emb|CAD28448.1| possible regulator of nonsense transcripts [Aspergillus fumigatus]
Length = 1060
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/207 (36%), Positives = 115/207 (55%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLRPYVFFDVIHGRESH 61
L+VQYRMHP + +FPS FY+G L + S + L +V + PV+ + F G E
Sbjct: 634 LNVQYRMHPCLSEFPSNMFYEGSLQNGVSAFDRLRRDVDFPWPVVDSPMMFWSNLGNEEI 693
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFR--NVL 119
SY N EA E + G+ +GIITPY+ Q + +
Sbjct: 694 SASGTSYLNRTEATN----VEKIVTRFFKAGVQPADIGIITPYEGQRSYIVSSMQANGTF 749
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
E K++ + +VDAFQG+E+D II+SCVR+++H G+GF++D RR+NVALTRA+ L ++
Sbjct: 750 KKEHYKEIEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLVIL 809
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN L++ W L+ K R+C ++
Sbjct: 810 GNPKVLSKHPLWNCLLQHFKERHCLVE 836
>gi|222629425|gb|EEE61557.1| hypothetical protein OsJ_15904 [Oryza sativa Japonica Group]
Length = 822
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 122/214 (57%), Gaps = 18/214 (8%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-------LPDEVYYKDPVLRPYVFFDV 54
LL++QYRM P I FP FY G+++D +V++ LP +++ PY F +V
Sbjct: 571 LLNIQYRMRPEISKFPVASFYDGKISDGPNVVSKNYKRNILPGKMF------GPYSFINV 624
Query: 55 IHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLG-KVTVGIITPYKLQLKCLQH 113
G E+ S +N E + + L + +S+ LG K+TVG+++PY Q++ +Q
Sbjct: 625 DGGHETTEKHGRSLKNTIEVAAVLWIVRRLFE--ESVFLGSKLTVGVVSPYNAQVRAIQE 682
Query: 114 EFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRAR 172
+ + + + + +VD FQG E DVII+S VR++ G VGF+ +++R N+ALTRA+
Sbjct: 683 KIGKTYDMYDDFSVKVKSVDGFQGAEEDVIIISTVRSNRAGSVGFLTNLQRTNMALTRAK 742
Query: 173 RALWVMGNAGALTQSDD-WAALIADSKARNCYMD 205
LW++GN L+ S W ++ D+K R C+ +
Sbjct: 743 HCLWIVGNGTTLSNSRSVWQKVVNDAKHRGCFFE 776
>gi|449445369|ref|XP_004140445.1| PREDICTED: uncharacterized protein LOC101212224 [Cucumis sativus]
Length = 1855
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 115/207 (55%), Gaps = 4/207 (1%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVI-NLPDEVYYKDPVLRPYVFFDVIHGRES 60
LL+ QYRMHP I FP+ FY ++ D+ V+ + + Y P+ PY F +V G+E
Sbjct: 762 LLNTQYRMHPSISYFPNSKFYSNQILDAPLVMAEVHKKCYIPSPMFGPYSFINVSVGKEE 821
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
S +N E + + E L K + ++ VG+I+ Y Q+ +Q +
Sbjct: 822 GDDDGYSKKNTVEVAVVIKIIEKLYKAWRGAK-TRLNVGVISFYAAQVSEIQSRLAHKYE 880
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVMG 179
+ + +VD FQG E DVII++ VR++ +GF++ +R+NVALTRAR LW++G
Sbjct: 881 KSHNFTVKVKSVDGFQGGEEDVIILTTVRSNRRKNIGFISSSQRINVALTRARHCLWIVG 940
Query: 180 NAGALTQSD-DWAALIADSKARNCYMD 205
+A L S+ +W A+++D+K R CY +
Sbjct: 941 DATTLGNSNSEWEAVVSDAKDRQCYFN 967
>gi|255575790|ref|XP_002528794.1| nonsense-mediated mRNA decay protein, putative [Ricinus communis]
gi|223531797|gb|EEF33616.1| nonsense-mediated mRNA decay protein, putative [Ricinus communis]
Length = 1280
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/282 (32%), Positives = 140/282 (49%), Gaps = 19/282 (6%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDE-VYYKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + +FPS FY+G L + +V + + PV +FF V G+E
Sbjct: 725 LQVQYRMHPSLSEFPSNSFYEGTLQNGVTVNERQSSGIDFPWPVPNRPMFFYVQMGQEEI 784
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLK-CLQHEFRN-VL 119
SY N EA E + T G+ +G+ITPY+ Q + + RN L
Sbjct: 785 SASGTSYLNRTEA----ANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGAL 840
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+ K++ + +VD+FQG+E+D II+SCVR++ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 841 RQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVIL 900
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD--MDSLPKEFSVALAAKAPGYGPLQGKIPHNAR 236
GN L++ W +L+ K C ++ +++L + K KI ++ R
Sbjct: 901 GNPKVLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMVQFQKPK---------KIYNDRR 951
Query: 237 GLRSAGQRHRSFDMNMESRSGTPSEDDEKVSRNGNYRPFKPP 278
G S D S +P+ D G+Y P PP
Sbjct: 952 LFFGGGPGIVSNDNFGSGASSSPNSDRRSSRGRGSYMPPGPP 993
>gi|219113369|ref|XP_002186268.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209583118|gb|ACI65738.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 1189
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/212 (35%), Positives = 116/212 (54%), Gaps = 11/212 (5%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN------LPDEVYYKDPVLRPYVFFDVI 55
+L+ QYRMHP I FP FY G L D +V L V P P + D+
Sbjct: 906 MLNEQYRMHPSISHFPRHIFYGGTLLDGPNVRKSDYGNPLLGMVTRTLPSFSPLMILDLD 965
Query: 56 HGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEF 115
E RGG+ S N EA+ V LY L+ + + + V +ITPY Q + L+ F
Sbjct: 966 SKEE--RGGT-SLSNSGEAQLAVYLYMRLKGISRGLS-AETKVAVITPYAQQARMLREYF 1021
Query: 116 RNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRA 174
+ L K + +NTVDAFQG+E +++I S VRA+ +HG+GF++D+RRMNVALTRA+
Sbjct: 1022 GDALGPNYEKFVEVNTVDAFQGREANIVIFSAVRAAGSHGIGFLSDVRRMNVALTRAKHF 1081
Query: 175 LWVMGNAGALTQSDDWAALIADSKARNCYMDM 206
L+V+ ++ + W+ L+ ++ + + +
Sbjct: 1082 LFVIARCDSIVVNPYWSDLVTHARKTHAVLKV 1113
>gi|449269034|gb|EMC79843.1| putative helicase senataxin, partial [Columba livia]
Length = 2491
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/202 (38%), Positives = 118/202 (58%), Gaps = 15/202 (7%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRL-TDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
L+VQYRMHP I FPS + Y L TD + N + +PY+ FDV RE
Sbjct: 2273 LTVQYRMHPDICLFPSNYVYGRTLRTDKATEENRCSSEW----PFQPYLIFDVGDSREER 2328
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVL-N 120
S + N E K + L +++ K +GL ++ GIITPY Q K +Q + V N
Sbjct: 2329 DNDS--FSNPQEVKLVMELIRTIKEKRKDLGLRRI--GIITPYSAQKKKIQEQLDRVYRN 2384
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNH--GVGFVADIRRMNVALTRARRALWVM 178
+ G+ ++TVDAFQG+E+D II++CVRA++ +GF+A ++R+NV +TRAR +L+++
Sbjct: 2385 NSPGE---VDTVDAFQGREKDCIIVTCVRANSTRGSIGFLASLQRLNVTITRARFSLFIL 2441
Query: 179 GNAGALTQSDDWAALIADSKAR 200
G L ++ DW LI D++ R
Sbjct: 2442 GRLKTLMENKDWNELIQDAQRR 2463
>gi|414886670|tpg|DAA62684.1| TPA: hypothetical protein ZEAMMB73_454199 [Zea mays]
Length = 925
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/210 (38%), Positives = 117/210 (55%), Gaps = 8/210 (3%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDE-VYYKDPVLRPYVFFDVIHGRES 60
LL VQYRMHP I FP FY GR+TD +V+N E + P+ Y F ++ G E+
Sbjct: 678 LLDVQYRMHPWISKFPVSSFYGGRITDGPNVLNRNYERRHLAGPMYGSYSFINIDGGSEA 737
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGK-VTVGIITPYKLQLKCLQHEF-RNV 118
S N EA + + L ++S+ K + VG+++PYK Q++ ++ + + V
Sbjct: 738 TGKQDRSLINPVEAAAVARIVQKL--FIESVDTRKAIRVGVVSPYKGQVRAIEEKLGKQV 795
Query: 119 LNSEEGK-DLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALW 176
+ G + + TVD FQG E DVII S VR++ G +GF+AD R NVALTRA+ LW
Sbjct: 796 YSMHNGSFSVKVRTVDGFQGAEEDVIIFSTVRSNTAGKIGFLADTNRTNVALTRAKHCLW 855
Query: 177 VMGNAGALTQSDD-WAALIADSKARNCYMD 205
++GNA L W ++ D+K R C+ D
Sbjct: 856 ILGNAKTLASGKTIWRQIVDDAKERGCFFD 885
>gi|119495335|ref|XP_001264454.1| regulator of nonsense transcripts, putative [Neosartorya fischeri
NRRL 181]
gi|119412616|gb|EAW22557.1| regulator of nonsense transcripts, putative [Neosartorya fischeri
NRRL 181]
Length = 1079
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/207 (36%), Positives = 115/207 (55%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLRPYVFFDVIHGRESH 61
L+VQYRMHP + +FPS FY+G L + S + L +V + PV+ + F G E
Sbjct: 653 LNVQYRMHPCLSEFPSNMFYEGSLQNGVSAFDRLRRDVDFPWPVVDSPMMFWSNLGNEEI 712
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFR--NVL 119
SY N EA E + G+ +GIITPY+ Q + +
Sbjct: 713 SASGTSYLNRTEATN----VEKIVTRFFKAGVQPADIGIITPYEGQRSYIVSSMQANGTF 768
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
E K++ + +VDAFQG+E+D II+SCVR+++H G+GF++D RR+NVALTRA+ L ++
Sbjct: 769 KKEHYKEIEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLVIL 828
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN L++ W L+ K R+C ++
Sbjct: 829 GNPKVLSKHPLWNCLLQHFKERHCLVE 855
>gi|70995842|ref|XP_752676.1| regulator of nonsense transcripts [Aspergillus fumigatus Af293]
gi|42820708|emb|CAF32021.1| regulator of nonsense transcripts, putative [Aspergillus fumigatus]
gi|66850311|gb|EAL90638.1| regulator of nonsense transcripts, putative [Aspergillus fumigatus
Af293]
gi|159131430|gb|EDP56543.1| regulator of nonsense transcripts, putative [Aspergillus fumigatus
A1163]
Length = 1079
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/207 (36%), Positives = 115/207 (55%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLRPYVFFDVIHGRESH 61
L+VQYRMHP + +FPS FY+G L + S + L +V + PV+ + F G E
Sbjct: 653 LNVQYRMHPCLSEFPSNMFYEGSLQNGVSAFDRLRRDVDFPWPVVDSPMMFWSNLGNEEI 712
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFR--NVL 119
SY N EA E + G+ +GIITPY+ Q + +
Sbjct: 713 SASGTSYLNRTEATN----VEKIVTRFFKAGVQPADIGIITPYEGQRSYIVSSMQANGTF 768
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
E K++ + +VDAFQG+E+D II+SCVR+++H G+GF++D RR+NVALTRA+ L ++
Sbjct: 769 KKEHYKEIEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLVIL 828
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN L++ W L+ K R+C ++
Sbjct: 829 GNPKVLSKHPLWNCLLQHFKERHCLVE 855
>gi|115491919|ref|XP_001210587.1| ATP-dependent helicase NAM7 [Aspergillus terreus NIH2624]
gi|114197447|gb|EAU39147.1| ATP-dependent helicase NAM7 [Aspergillus terreus NIH2624]
Length = 1072
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/208 (37%), Positives = 118/208 (56%), Gaps = 10/208 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVL-RPYVFFDVIHGRES 60
L+VQYRMHP + +FPS FY+G L + S I L +V + P++ P +F+ + G E
Sbjct: 646 LNVQYRMHPCLSEFPSNMFYEGSLQNGISSIERLRRDVDFPWPIMDNPMMFWSNL-GNEE 704
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFR--NV 118
SY N EA E + G+ +GIITPY+ Q + +
Sbjct: 705 ISASGTSYLNRTEATN----VEKIVTRFFKAGVQPQDIGIITPYEGQRSYIVSSMQANGT 760
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWV 177
E K++ + +VDAFQG+E+D II+SCVR+++H G+GF++D RR+NVALTRA+ L +
Sbjct: 761 FKKEHYKEIEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLAI 820
Query: 178 MGNAGALTQSDDWAALIADSKARNCYMD 205
+GN L++ W L+ K R+C ++
Sbjct: 821 LGNPKVLSKHPLWNCLLQHFKERHCLVE 848
>gi|328865229|gb|EGG13615.1| helicase [Dictyostelium fasciculatum]
Length = 1162
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 132/245 (53%), Gaps = 32/245 (13%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVL----------RPYVFF 52
L+ QYRMHP + +FPS FY+G+L + E+ Y+D V RP +FF
Sbjct: 778 LTTQYRMHPALSEFPSNTFYEGQLVN---------EISYRDRVTNNGFVWPHPNRP-MFF 827
Query: 53 DVIHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQ 112
G E S+ N EA L E + +G +GIITPY+ Q L
Sbjct: 828 HNSTGHEEISSSGTSFINRTEA----TLCEKIVTRFLELGTKPSQIGIITPYEGQRSFLV 883
Query: 113 HEFRNV--LNSEEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALT 169
+ + L S+ K++ + +VD+FQG+E+D II+SCVR++ N G+GF+ D RR+NVALT
Sbjct: 884 NNMQRTGRLPSDLYKEIEVASVDSFQGREKDFIILSCVRSNENQGIGFLQDPRRLNVALT 943
Query: 170 RARRALWVMGNAGALTQSDDWAALIADSKARNCYMD--MDSLPKEFSVALAAKAPGYGPL 227
RAR L ++GNA L++ W LI+ KA ++ + +L K+ SV L +G
Sbjct: 944 RARYGLIILGNARVLSRDLLWNNLISHFKANEVLVEGGLQNL-KQSSVVLQKPRKIHG-- 1000
Query: 228 QGKIP 232
+GK+P
Sbjct: 1001 EGKLP 1005
>gi|449445371|ref|XP_004140446.1| PREDICTED: uncharacterized protein LOC101212468 [Cucumis sativus]
Length = 2710
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/213 (37%), Positives = 123/213 (57%), Gaps = 12/213 (5%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLR----PYVFFDVIHG 57
LL+VQYRMHP I FP+ FY ++ D N+ Y K+ +L PY F ++ +G
Sbjct: 567 LLNVQYRMHPSISFFPNSKFYFSQILDGP---NVQSSNYQKNYLLGSMFGPYSFINIKYG 623
Query: 58 RESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRN 117
+E S +N+ E + + + L K K+ K+++GII+PY Q+ ++ + +
Sbjct: 624 KEEKDDIGHSRKNMIEVAVALKIVQSLYKAWKN-SRRKLSIGIISPYSAQVATIRDKIGH 682
Query: 118 VLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG--VGFVADIRRMNVALTRARRAL 175
+ +G + + +VD FQG E D+II+S VR SN G VGF++ +R NVALTRAR L
Sbjct: 683 RYDKLDGFWVKVKSVDGFQGGEEDIIIISTVR-SNRGSSVGFLSCDQRTNVALTRARYCL 741
Query: 176 WVMGNAGALTQSD-DWAALIADSKARNCYMDMD 207
W++GN L+ S+ WA L+ D+K R C+ + D
Sbjct: 742 WILGNDKTLSNSESSWAHLVCDAKDRGCFFNAD 774
>gi|307107371|gb|EFN55614.1| hypothetical protein CHLNCDRAFT_133757 [Chlorella variabilis]
Length = 2033
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/214 (40%), Positives = 114/214 (53%), Gaps = 15/214 (7%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEV--------YYKDPVLRPYVFFD 53
LLS QYRMHP I FP+ FY G+L D+ +V ++ P L P F+D
Sbjct: 1794 LLSQQYRMHPAISAFPASFFYSGKLLDAAAVAGGGSAGAGGGRTAPWHDRPCLPPLAFWD 1853
Query: 54 VIHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH 113
GRE GG S N +EA+ LY L + +G V V +TPYK QL L+
Sbjct: 1854 CREGREWGGGGGSSVSNTEEAEVAYVLYAELVGRYRQ-DVGDVAV--LTPYKAQLSQLRR 1910
Query: 114 EFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRA----SNHGVGFVADIRRMNVALT 169
F+ + + + TVD FQG+E DV+I SCVRA S GVGF+AD RRMNVALT
Sbjct: 1911 TFQQRGGTAAAEAVQFATVDGFQGREADVVIFSCVRAHGAGSGGGVGFLADCRRMNVALT 1970
Query: 170 RARRALWVMGNAGALTQSDDWAALIADSKARNCY 203
R RR+LWV+G++ L + W L+ + C
Sbjct: 1971 RGRRSLWVIGHSATLEACEPWQELMRHCRQHRCL 2004
>gi|359490548|ref|XP_002267012.2| PREDICTED: uncharacterized protein LOC100267290 [Vitis vinifera]
Length = 1115
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/235 (35%), Positives = 132/235 (56%), Gaps = 20/235 (8%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLR-----PYVFFDVIH 56
LL++QYRMHP I FP++ FY +++D+ +V E YK L+ Y F +V +
Sbjct: 706 LLNLQYRMHPSISLFPNQEFYNNKISDAPNV----KERSYKRCFLQGDMYGSYSFINVAY 761
Query: 57 GRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKS--MGLGKVTVGIITPYKLQLKCLQHE 114
G E + S S +N+ E V + E + K K KV+VG+I+PY Q+ +Q +
Sbjct: 762 GNE-EQSNSHSTRNMVEV---VAVSEIVAKLFKESVANKQKVSVGVISPYNAQVFAIQEK 817
Query: 115 FRNVLNSEEGKDLYIN--TVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRA 171
++ D ++ +VD FQG E DVII+S VR++ +G VGF+++ +R NVALTRA
Sbjct: 818 LGKTYSTSTHSDFSVSVRSVDGFQGGEEDVIIISTVRSNLNGKVGFLSNRQRANVALTRA 877
Query: 172 RRALWVMGNAGALTQSDD-WAALIADSKARNCYMDMDSLPKEFSVALAAKAPGYG 225
R LW++GN L S W L++++KAR C+ + + K + A+A +G
Sbjct: 878 RHCLWILGNGPTLANSGTIWTKLVSNAKARGCFYNAED-DKNLAQAIATSLVEHG 931
>gi|374723515|gb|EHR75595.1| putative DNA helicase [uncultured marine group II euryarchaeote]
Length = 662
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/206 (37%), Positives = 111/206 (53%), Gaps = 7/206 (3%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
+L+ QYRMHP IR++PS FY+ RL D + + P + P V F I G E
Sbjct: 453 MLTTQYRMHPTIREYPSARFYEDRLDDGCTPADRPPAAGFLWPDWDHPVAFVPIDGSEIV 512
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
S N+DEA + + L L + L +G+ITPY Q++ L F
Sbjct: 513 DEEGSSKSNLDEAAKVLSIVNGL---LSAGDLTPADIGVITPYSGQVRLLVDLFEQAGGR 569
Query: 122 EEGK---DLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWV 177
EEG L I +VD +QG+E+++I+ S VRA+ HG +GF+ D RR+NVA+TRARR L V
Sbjct: 570 EEGAPYAGLEIKSVDGYQGREKEIIVFSAVRANEHGEIGFLRDRRRLNVAITRARRGLIV 629
Query: 178 MGNAGALTQSDDWAALIADSKARNCY 203
+GN L W A + ++ RN +
Sbjct: 630 LGNTKTLRHDGTWRAWLDWAEERNLF 655
>gi|255937245|ref|XP_002559649.1| Pc13g12330 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211584269|emb|CAP92302.1| Pc13g12330 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1079
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/261 (32%), Positives = 134/261 (51%), Gaps = 18/261 (6%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLRPYVFFDVIHGRESH 61
L+VQYRMHP + +FPS FY+G L + ++ + + +V + P++ + F G E
Sbjct: 651 LNVQYRMHPCLSEFPSNMFYEGSLQNGITIADRVRRDVDFPWPIIDDPMMFWSNLGNEEI 710
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFR--NVL 119
SY N EA E + G+ +GIITPY+ Q + +
Sbjct: 711 SASGTSYLNRTEATN----VEKIVTRFFKAGVQPKDIGIITPYEGQRSYIVSSMQANGTF 766
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
E K++ + +VDAFQG+E+D II+SCVR+++H G+GF++D RR+NVALTRAR L ++
Sbjct: 767 KKEHYKEIEVASVDAFQGREKDYIILSCVRSNDHQGIGFLSDPRRLNVALTRARFGLVIL 826
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD--MDSLPKEFSVALAAKAPGYGPLQ-------- 228
GN L++ W L+ K R+C ++ + +L + K GP +
Sbjct: 827 GNPKVLSKHPLWNCLLQHFKERHCLVEGPLSNLQESLIQFSRPKQAYRGPQRFQMSFSQT 886
Query: 229 GKIPHNARGLRSAGQRHRSFD 249
+P NA R+ G R+ D
Sbjct: 887 NNVPSNAVNGRNGGHRNEYHD 907
>gi|449526710|ref|XP_004170356.1| PREDICTED: uncharacterized protein LOC101229717 [Cucumis sativus]
Length = 2474
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/213 (37%), Positives = 123/213 (57%), Gaps = 12/213 (5%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLR----PYVFFDVIHG 57
LL+VQYRMHP I FP+ FY ++ D N+ Y K+ +L PY F ++ +G
Sbjct: 567 LLNVQYRMHPSISFFPNSKFYFSQILDGP---NVQSSNYQKNYLLGSMFGPYSFINIKYG 623
Query: 58 RESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRN 117
+E S +N+ E + + + L K K+ K+++GII+PY Q+ ++ + +
Sbjct: 624 KEEKDDIGHSRKNMIEVAVALKIVQSLYKAWKN-SRRKLSIGIISPYSAQVATIRDKIGH 682
Query: 118 VLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG--VGFVADIRRMNVALTRARRAL 175
+ +G + + +VD FQG E D+II+S VR SN G VGF++ +R NVALTRAR L
Sbjct: 683 RYDKLDGFWVKVKSVDGFQGGEEDIIIISTVR-SNRGSSVGFLSCDQRTNVALTRARYCL 741
Query: 176 WVMGNAGALTQSD-DWAALIADSKARNCYMDMD 207
W++GN L+ S+ WA L+ D+K R C+ + D
Sbjct: 742 WILGNDKTLSNSESSWAHLVCDAKDRGCFFNAD 774
>gi|412990245|emb|CCO19563.1| predicted protein [Bathycoccus prasinos]
Length = 688
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/202 (38%), Positives = 113/202 (55%), Gaps = 15/202 (7%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRE--S 60
LS+QYRM P IR FPSR FY G LTD S+ N V K PY+ FD E S
Sbjct: 475 LSIQYRMLPEIRHFPSRFFYDGILTDDPSMSN--KGVMNKMWPSEPYLLFDTGDTFETRS 532
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKV--TVGIITPYKLQLKCLQHEFRNV 118
+RG V+ F V L L K SM G+ ++ +ITPYK Q ++ R
Sbjct: 533 NRGSVVNL-------FEVSLIFSLLKCFTSMNPGRTLQSIAVITPYKEQKDLIEQTLRKT 585
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVM 178
++T+D FQG+E + +I+SCVRA+N+ +GF++D +R+NVA+TRA++ W++
Sbjct: 586 FGRSTSVPC-VSTIDGFQGKECEFVIISCVRATNN-IGFLSDAQRLNVAITRAKKRCWIL 643
Query: 179 GNAGALTQSDDWAALIADSKAR 200
GN +L + W ++ D+ +R
Sbjct: 644 GNLNSLCRDKIWRHVVEDAVSR 665
>gi|302769075|ref|XP_002967957.1| hypothetical protein SELMODRAFT_408911 [Selaginella moellendorffii]
gi|300164695|gb|EFJ31304.1| hypothetical protein SELMODRAFT_408911 [Selaginella moellendorffii]
Length = 2870
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 86/210 (40%), Positives = 123/210 (58%), Gaps = 21/210 (10%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY---YKDPVLRPYVFFDVIHG 57
++L+VQYRMHP I FP+ FY+G + D +V+ D+ Y + + PY F +V HG
Sbjct: 741 IMLNVQYRMHPSISQFPNFQFYEGAICDGPNVV---DDFYGQLSQSQLFGPYTFLNV-HG 796
Query: 58 RESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRN 117
E+ + S N E V + HL K L G K+ VGII+PY Q+K + +
Sbjct: 797 VET-KDEKHSKSNAVE----VLVVMHLLKMLHQSG-EKLEVGIISPYAAQVKAIN----D 846
Query: 118 VLNSEEGKDLYIN--TVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRA 174
L S + L IN +VD FQG+E+DVII+S VR++ G +GF+ D RR+NVA+TRAR
Sbjct: 847 RLKSWDHGSLSINCRSVDGFQGREKDVIILSTVRSNVGGYLGFLEDHRRLNVAITRARHV 906
Query: 175 LWVMGNAGALTQSDD-WAALIADSKARNCY 203
L ++G+A L SD W L+ D++ R CY
Sbjct: 907 LCIVGSANTLESSDGVWRQLLNDARHRKCY 936
>gi|357482277|ref|XP_003611424.1| Regulator of nonsense transcripts-like protein [Medicago
truncatula]
gi|355512759|gb|AES94382.1| Regulator of nonsense transcripts-like protein [Medicago
truncatula]
Length = 1253
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 97/286 (33%), Positives = 145/286 (50%), Gaps = 23/286 (8%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDE-VYYKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + +FPS FY+G L + +V + + PV +FF V G+E
Sbjct: 706 LQVQYRMHPCLSEFPSNSFYEGTLQNGVTVNERQSTGIDFPWPVPNRPMFFYVQMGQEEI 765
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLK-CLQHEFRN-VL 119
SY N EA E + T G+ +G+ITPY+ Q + + RN L
Sbjct: 766 SASGTSYLNRTEA----ANVEKIVTTFLKSGVVPSQIGVITPYEGQRAYIVNYMSRNGAL 821
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+ K++ + +VD+FQG+E+D II+SCVR++ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 822 RQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVIL 881
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD--MDSLPKEFSVALAAKAPGYGPLQGKIPHNAR 236
GN L++ W L+ K C ++ +++L + K KI +N R
Sbjct: 882 GNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPK---------KI-YNER 931
Query: 237 GLRSAGQRHRSFDMNMESRSGTPSEDDEKVSRN-GNYRPFKPPLEN 281
L G + + N S +GT S D + R G+Y P PP N
Sbjct: 932 RLFYGGGPGVAANDNFGSGAGTSS--DRRTGRGRGSYIPSGPPNGN 975
>gi|357491663|ref|XP_003616119.1| Regulator of nonsense transcripts-like protein [Medicago
truncatula]
gi|355517454|gb|AES99077.1| Regulator of nonsense transcripts-like protein [Medicago
truncatula]
Length = 860
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 119/206 (57%), Gaps = 5/206 (2%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLP-DEVYYKDPVLRPYVFFDVIHGRES 60
+L++QYRMHP I FP + FY +L+D+ +V + ++++ + Y F ++ G+E
Sbjct: 604 MLNIQYRMHPSISLFPCKEFYDEKLSDAPAVKEVSYNKLFLVGDMYSSYSFINIAKGKEK 663
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRN-VL 119
S +N+ E + + L K KV++GII+PY Q+ +Q + +
Sbjct: 664 LGHCGQSLKNMVEVAVISEMIKSLNKVFMRTK-KKVSIGIISPYNAQVNEIQEKVKQYTW 722
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVM 178
++ + + +VD FQG E D+II+S VR++ G VGF+++ +R NVA+TRAR LW++
Sbjct: 723 DTTSDFSVNVRSVDGFQGGEEDIIIISTVRSNGSGNVGFLSNRQRANVAMTRARYCLWIL 782
Query: 179 GNAGALTQSDD-WAALIADSKARNCY 203
GNA L SD W ++ D+K R+C+
Sbjct: 783 GNAATLINSDSVWRNVVLDAKRRDCF 808
>gi|320166766|gb|EFW43665.1| MAA3 [Capsaspora owczarzaki ATCC 30864]
Length = 2435
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 121/216 (56%), Gaps = 17/216 (7%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPV-----LRPYVFFDVIH 56
LLS QYRM P I FP+R FY+GRLT+ PD+ +++ P RP+VF++V
Sbjct: 1814 LLSTQYRMAPQIAKFPNREFYEGRLTNF-----YPDD-HFRLPCHEQLQFRPFVFYNVHE 1867
Query: 57 GRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFR 116
G+E ++++ VD V H + G V++G+++PY Q+ ++ +
Sbjct: 1868 GKEKQDKSKINWEEVDTVS-RVLQKLHTKYPEMFEGTQPVSIGVLSPYSDQVGLIRKKID 1926
Query: 117 NVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALW 176
L + K + ++TVDAFQG+E+D+++ SCV +GF+AD RRMNVALTRAR+ L+
Sbjct: 1927 QKLPHMQ-KFIEVDTVDAFQGREKDIVLFSCVFTDR--IGFLADTRRMNVALTRARKCLF 1983
Query: 177 VMGNAGALTQSDD--WAALIADSKARNCYMDMDSLP 210
V+G A +L + W L+ + + D +P
Sbjct: 1984 VIGRAESLMNGSEPSWRHLVRYAIDKEVMCDSHGIP 2019
>gi|388579514|gb|EIM19837.1| hypothetical protein WALSEDRAFT_40862 [Wallemia sebi CBS 633.66]
Length = 1987
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 123/241 (51%), Gaps = 25/241 (10%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL+ QYRMHP I PS FY G L D + ++ + + Y FFD G
Sbjct: 1596 LLNEQYRMHPDISKLPSAVFYNGHLKDGPMMAEKTKAPWHSNDLFGTYKFFDFAGG---E 1652
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
R SYQN DEA + LYE L+K V II YK Q++ +++E + +
Sbjct: 1653 RRVDHSYQNPDEASVVISLYERLRKQYGGEFSLDYRVAIIATYKQQVRYIRNELKKRFWN 1712
Query: 122 EEGKDLY----INTVDAFQGQERDVIIMSCVRASNHG------------VGFVADIRRMN 165
+ KD+ +NTVD FQGQE+ +II+S VR++ +GF+ DIRRMN
Sbjct: 1713 VD-KDILSKVDVNTVDGFQGQEKTIIILSTVRSTKFEDDGIYKERGGGPIGFLKDIRRMN 1771
Query: 166 VALTRARRALWVMGNAGALTQSDDWAALIADSKARNCYMDMD----SLPKEFSVALAAKA 221
VALTRA+ +L+++G+A L W ++ D++ R+ ++ S P F VA K
Sbjct: 1772 VALTRAQSSLFIVGHADKLKYDQTWQHIVDDAEQRDLLQKINRNHFSQPSNF-VATKLKH 1830
Query: 222 P 222
P
Sbjct: 1831 P 1831
>gi|224010575|ref|XP_002294245.1| hypothetical protein THAPSDRAFT_264317 [Thalassiosira pseudonana
CCMP1335]
gi|220970262|gb|EED88600.1| hypothetical protein THAPSDRAFT_264317 [Thalassiosira pseudonana
CCMP1335]
Length = 608
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 118/211 (55%), Gaps = 11/211 (5%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVI------NLPDEVYYKDPVLRPYVFFDV 54
M+L+ QYRMHP I +FP FY+G L D +V L + K P ++P+ FD
Sbjct: 339 MMLNTQYRMHPIISEFPRHIFYEGMLLDGPNVQKPDFGGTLKTAIVGKFPHIKPFNIFD- 397
Query: 55 IHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHE 114
+ +E G S+S N +EA+ + LY L + + L K V +ITPY Q L
Sbjct: 398 LDSKEERDGTSLS--NTNEAQLALHLYCALDRETNGL-LAKSRVAVITPYSQQTALLHRL 454
Query: 115 FRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARR 173
F + + I+TVDAFQG+E ++I SCVRA+ + G+GF++D++RMNVALTRA+
Sbjct: 455 FEEQFGNAYSSRVEISTVDAFQGREAGLVIYSCVRAAGSKGIGFLSDVQRMNVALTRAKY 514
Query: 174 ALWVMGNAGALTQSDDWAALIADSKARNCYM 204
L+V+ ++ + W L+ ++ ++ +
Sbjct: 515 FLFVIARCRSIMVNPYWRNLVGYAREKSAII 545
>gi|171693713|ref|XP_001911781.1| hypothetical protein [Podospora anserina S mat+]
gi|170946805|emb|CAP73609.1| unnamed protein product [Podospora anserina S mat+]
Length = 1090
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 74/207 (35%), Positives = 114/207 (55%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLRPYVFFDVIHGRESH 61
L+VQYRMHP + +FPS FY+G L + ++ L +V + PV + F G E
Sbjct: 674 LNVQYRMHPCLSEFPSNMFYEGSLQNGVTITERLRKDVDFPWPVAETPMMFWSNLGNEEI 733
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV--L 119
SY N EA E + G+ +G+ITPY+ Q + +N
Sbjct: 734 SASGTSYLNRTEASN----VEKIVTRFFKAGVKPSDIGVITPYEGQRSYIVSTMQNTGTF 789
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRALWVM 178
E K++ + +VDAFQG+E+D I++SCVR++ N G+GF++D RR+NVALTRA+ L ++
Sbjct: 790 KKESYKEVEVASVDAFQGREKDFIVLSCVRSNDNQGIGFLSDPRRLNVALTRAKYGLVII 849
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN L++ + W L+ K R C ++
Sbjct: 850 GNPKVLSKHELWHHLLVHFKDRKCLVE 876
>gi|359473527|ref|XP_002263192.2| PREDICTED: uncharacterized protein LOC100243095 [Vitis vinifera]
Length = 2788
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 75/209 (35%), Positives = 118/209 (56%), Gaps = 5/209 (2%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLP-DEVYYKDPVLRPYVFFDVIHGRES 60
LL+VQYRMHP I FP+ FY ++ D+ +V + + Y P+ Y F +V G+E
Sbjct: 658 LLNVQYRMHPSISFFPNSKFYFNQILDAPNVKSKSYTKHYLSGPMFGSYSFINV-RGKEE 716
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
H S +N+ E + + +L K K+++G+I+PY Q+ +Q
Sbjct: 717 HDDVGKSRKNMIEVAIVIKIVGNLYKEWSGSN-QKLSIGVISPYAAQVVAVQDNLGEKYE 775
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVMG 179
+ + + + TVD FQ E D+IIMS VRA++HG +GF+++ +R NVALTRAR LW++G
Sbjct: 776 NLDNFAVKVKTVDGFQAGEEDIIIMSTVRANSHGSIGFLSNPQRTNVALTRARHCLWILG 835
Query: 180 NAGALTQSDD-WAALIADSKARNCYMDMD 207
N L +S+ W L+ D+K R + + D
Sbjct: 836 NERTLAKSESVWEDLVCDAKRRKRFFNAD 864
>gi|302143703|emb|CBI22564.3| unnamed protein product [Vitis vinifera]
Length = 944
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 84/235 (35%), Positives = 132/235 (56%), Gaps = 20/235 (8%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLR-----PYVFFDVIH 56
LL++QYRMHP I FP++ FY +++D+ +V E YK L+ Y F +V +
Sbjct: 535 LLNLQYRMHPSISLFPNQEFYNNKISDAPNV----KERSYKRCFLQGDMYGSYSFINVAY 590
Query: 57 GRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKS--MGLGKVTVGIITPYKLQLKCLQHE 114
G E + S S +N+ E V + E + K K KV+VG+I+PY Q+ +Q +
Sbjct: 591 GNE-EQSNSHSTRNMVEV---VAVSEIVAKLFKESVANKQKVSVGVISPYNAQVFAIQEK 646
Query: 115 FRNVLNSEEGKDLYIN--TVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRA 171
++ D ++ +VD FQG E DVII+S VR++ +G VGF+++ +R NVALTRA
Sbjct: 647 LGKTYSTSTHSDFSVSVRSVDGFQGGEEDVIIISTVRSNLNGKVGFLSNRQRANVALTRA 706
Query: 172 RRALWVMGNAGALTQSDD-WAALIADSKARNCYMDMDSLPKEFSVALAAKAPGYG 225
R LW++GN L S W L++++KAR C+ + + K + A+A +G
Sbjct: 707 RHCLWILGNGPTLANSGTIWTKLVSNAKARGCFYNAED-DKNLAQAIATSLVEHG 760
>gi|427788499|gb|JAA59701.1| Hypothetical protein [Rhipicephalus pulchellus]
Length = 1125
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 80/200 (40%), Positives = 115/200 (57%), Gaps = 16/200 (8%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRL-----TDSESVINLPDEVYYKDPVLRPYVFFDVIHG 57
L VQYRMHP + FPS FY+G L D + L + + P RP +F+ G
Sbjct: 679 LEVQYRMHPQLAQFPSNFFYEGSLQNGVFADERRMRGL--DFPWPQPE-RPMLFY-ACQG 734
Query: 58 RESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCL-QH-EF 115
+E G SY N EA L E + G+ VG+ITPY+ Q L QH +F
Sbjct: 735 QEEMAGSGTSYLNRTEA----ALVEKICTRFLRSGVKPQQVGVITPYEGQRAYLVQHMQF 790
Query: 116 RNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRA 174
+ L+S+ +++ + +VDAFQG+E+D+I+MSCVR++ H G+GF+ D RR+NVALTRAR
Sbjct: 791 QGALHSKLYQEIEVASVDAFQGREKDLIVMSCVRSNEHQGIGFLNDPRRLNVALTRARYG 850
Query: 175 LWVMGNAGALTQSDDWAALI 194
L ++GN L++ W L+
Sbjct: 851 LIIVGNPKVLSKQPLWNHLL 870
>gi|357491677|ref|XP_003616126.1| DNA-binding protein SMUBP-2 [Medicago truncatula]
gi|355517461|gb|AES99084.1| DNA-binding protein SMUBP-2 [Medicago truncatula]
Length = 1046
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 75/209 (35%), Positives = 121/209 (57%), Gaps = 12/209 (5%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKD----PVLRPYVFFDVIHG 57
+L+VQYRMHP I FP + FY G+++D+ + + E Y K + Y F ++ G
Sbjct: 788 MLNVQYRMHPSISLFPCKEFYDGKISDA---VIVGKEKYNKHFLEGKMYASYSFINIAKG 844
Query: 58 RESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRN 117
+E G S +N+ E + E L+ KV++GII+PY Q+ +Q + +
Sbjct: 845 KEQF-GRENSLKNMVEVAVISKILESLKHEFMRTK-KKVSIGIISPYNAQVFEIQEKVKQ 902
Query: 118 VLN-SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRAL 175
+ S+ + + +VD FQG E D+II+S VR++ G VGF+++ +R+NVA+TRAR L
Sbjct: 903 YIAVSDTDFSVSVRSVDGFQGGEEDIIIISTVRSNESGKVGFLSNRQRVNVAITRARYCL 962
Query: 176 WVMGNAGALTQSDD-WAALIADSKARNCY 203
W++GNA L SD W ++ D+K R+C+
Sbjct: 963 WILGNAATLINSDSVWRNVVLDAKRRDCF 991
>gi|164658495|ref|XP_001730373.1| hypothetical protein MGL_2755 [Malassezia globosa CBS 7966]
gi|159104268|gb|EDP43159.1| hypothetical protein MGL_2755 [Malassezia globosa CBS 7966]
Length = 1900
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 76/200 (38%), Positives = 115/200 (57%), Gaps = 5/200 (2%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LLS+QYRMHP I FPS FY +L D + + + ++ + P+ FF V E
Sbjct: 1456 LLSIQYRMHPDISLFPSTAFYGRQLIDGPQMASKTLQPWHNTQLFGPFRFFHVDALEEPG 1515
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
R S+ QN EA + +YE L ++ G+V G ++ YK Q+ L+ F +
Sbjct: 1516 RSHSI--QNQSEAYTAMQVYEALCACAQTSLRGRV--GFVSMYKAQVDLLRTLFVSQYGR 1571
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASNHGV-GFVADIRRMNVALTRARRALWVMGN 180
D+ ++VD FQGQE+D+II+SCVR++ V GF++D RR+NVALTRAR + V+GN
Sbjct: 1572 AAAMDVDFSSVDGFQGQEKDIIILSCVRSNKDRVMGFLSDHRRLNVALTRARSNMIVIGN 1631
Query: 181 AGALTQSDDWAALIADSKAR 200
A L W +I+++++R
Sbjct: 1632 ASMLGNDTIWRDMISEARSR 1651
>gi|359474491|ref|XP_002279304.2| PREDICTED: regulator of nonsense transcripts 1 homolog [Vitis
vinifera]
gi|297742168|emb|CBI33955.3| unnamed protein product [Vitis vinifera]
Length = 1267
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 91/282 (32%), Positives = 139/282 (49%), Gaps = 19/282 (6%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDE-VYYKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + +FPS FY+G L + ++ + + PV +FF V G+E
Sbjct: 703 LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEI 762
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLK-CLQHEFRN-VL 119
SY N EA E + T G+ +G+ITPY+ Q + + RN L
Sbjct: 763 SASGTSYLNRTEA----ANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGAL 818
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+ K++ + +VD+FQG+E+D II+SCVR++ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 819 RQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVIL 878
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD--MDSLPKEFSVALAAKAPGYGPLQGKIPHNAR 236
GN L++ W +L+ K C ++ +++L + K KI ++ R
Sbjct: 879 GNPKVLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMVQFQKPK---------KIYNDRR 929
Query: 237 GLRSAGQRHRSFDMNMESRSGTPSEDDEKVSRNGNYRPFKPP 278
G D S +PS D G+Y P PP
Sbjct: 930 LFFGGGPGIVPNDNFGTVTSSSPSADRRSSRGRGSYMPSGPP 971
>gi|319789787|ref|YP_004151420.1| DNA helicase [Thermovibrio ammonificans HB-1]
gi|317114289|gb|ADU96779.1| DNA helicase [Thermovibrio ammonificans HB-1]
Length = 720
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 79/210 (37%), Positives = 118/210 (56%), Gaps = 23/210 (10%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESV-------INLPDEVYYK---DPVLRPYVF 51
+L VQYRM+ I +FP+R FY+G+L + V NL +K DP + P F
Sbjct: 513 MLRVQYRMNEKIMEFPNREFYEGKLVAAPEVKERTLADFNLEAPRKFKKVLDPSV-PLGF 571
Query: 52 FDV--IHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLK 109
D I+ E GS SY+N +EAK V + L + MGL + +GIITPY Q+K
Sbjct: 572 IDTSSINAYEFQPEGSTSYENYEEAKIAVEVALELHR----MGLDRREIGIITPYAAQVK 627
Query: 110 CLQHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVAL 168
++ L +E + +N+VD FQG+E++ II+S VR+++ G +GF+ D+RR+NVA+
Sbjct: 628 LIKQ-----LLAEREFKVEVNSVDGFQGREKEAIIVSFVRSNDEGEIGFLKDLRRLNVAI 682
Query: 169 TRARRALWVMGNAGALTQSDDWAALIADSK 198
TR RR L +GN L+ ++ I K
Sbjct: 683 TRPRRKLVAIGNTKTLSSHSTYSRFIEHVK 712
>gi|330796515|ref|XP_003286312.1| hypothetical protein DICPUDRAFT_150267 [Dictyostelium purpureum]
gi|325083739|gb|EGC37184.1| hypothetical protein DICPUDRAFT_150267 [Dictyostelium purpureum]
Length = 2271
Score = 127 bits (320), Expect = 6e-27, Method: Composition-based stats.
Identities = 73/195 (37%), Positives = 115/195 (58%), Gaps = 14/195 (7%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
+L QYRMHP I F S+HFY G+L DS ++I + ++ +D P F+D+I +E
Sbjct: 1577 ILDTQYRMHPSISHFSSKHFYSGKLKDSPNLIQ-NNTLFNQDQKYTPLEFYDIIDSQEEK 1635
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLK--CLQHEFRNVL 119
GS+ ++ E F + + + +Q K L ++T+GIITPYKLQ L ++ N
Sbjct: 1636 CFGSIKNESEIETVFRI-IKKLVQDNPK---LKELTIGIITPYKLQRNELILSKKYFN-- 1689
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMG 179
+ D+ INT+D F G E+D+II SCVR+ +GF+ D ++N+A+TRA+ L+++G
Sbjct: 1690 ---QPIDIEINTIDGFHGVEKDIIIFSCVRSER--LGFLNDKSQINIAITRAKYGLFIIG 1744
Query: 180 NAGALTQSDDWAALI 194
N L + W+ LI
Sbjct: 1745 NKNLLEKDTIWSQLI 1759
>gi|111219429|ref|XP_646844.2| hypothetical protein DDB_G0268924 [Dictyostelium discoideum AX4]
gi|90970905|gb|EAL73051.2| hypothetical protein DDB_G0268924 [Dictyostelium discoideum AX4]
Length = 1772
Score = 127 bits (320), Expect = 6e-27, Method: Composition-based stats.
Identities = 81/212 (38%), Positives = 114/212 (53%), Gaps = 17/212 (8%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINL--PDEVYYKDPVLRPYVFFDVIHGRE 59
+L VQYRMHP I FPS FY+ RL D ++V +L ++ D P F+DVI +E
Sbjct: 1446 MLHVQYRMHPTISRFPSNQFYRDRLLDGDNVKSLVYNQHNFHSDIKYGPIRFYDVIDSKE 1505
Query: 60 SHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQ---LKCLQHEFR 116
G S +N E L + L + K + GIITPYKLQ +K +F
Sbjct: 1506 --ESGKRSLKNKLEITMVFTLIKKLVQDYPE--CKKFSFGIITPYKLQKSEIKEQHKQFN 1561
Query: 117 NVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALW 176
LN E +T+D FQG E+D+II+SCVR+ +GF++D RR+NVALTRA+ L+
Sbjct: 1562 YPLNIE------TSTIDGFQGSEKDIIILSCVRSER--IGFLSDRRRINVALTRAKFGLF 1613
Query: 177 VMGNAGALTQSDDWAALIADSKARNCYMDMDS 208
V+GN+ L + W + N + +DS
Sbjct: 1614 VIGNSKLLKKDRTWGPFCQYVHSINSMVSIDS 1645
>gi|118489512|gb|ABK96558.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 582
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 76/207 (36%), Positives = 115/207 (55%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDE-VYYKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + +FPS FY+G L + +V + + PV +FF V G+E
Sbjct: 28 LQVQYRMHPSLSEFPSNSFYEGTLQNGVTVNERQSSGIDFPWPVPNRPMFFYVQMGQEEI 87
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLK-CLQHEFRN-VL 119
SY N EA E + T G+ +G+ITPY+ Q + + RN L
Sbjct: 88 SASGTSYLNRTEA----ANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGSL 143
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+ K++ + +VD+FQG+E+D II+SCVR++ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 144 RQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVIL 203
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN L++ W +L+ K C ++
Sbjct: 204 GNPKVLSKQPLWNSLLTHYKEHECLVE 230
>gi|50251911|dbj|BAD27849.1| tRNA-splicing endonuclease positive effector-like [Oryza sativa
Japonica Group]
gi|50251934|dbj|BAD27870.1| tRNA-splicing endonuclease positive effector-like [Oryza sativa
Japonica Group]
Length = 372
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 108/196 (55%), Gaps = 9/196 (4%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRP----YVFFDVIHG 57
LL VQYRMHP I FP FY+ +++D E+V++ Y + P+ P Y F +V G
Sbjct: 181 LLDVQYRMHPGISKFPVSSFYENKISDGENVLH---RDYERKPLAGPMYGSYSFINVDAG 237
Query: 58 RESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRN 117
+ES S N E + + L K G K+ VG+++PYK Q++ +Q
Sbjct: 238 KESKGKHDKSLMNPIEVAAVTRIVQRLFKESVDTG-RKLCVGVVSPYKGQVRAIQERLGK 296
Query: 118 VLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALW 176
+ G + + +VD FQG E D+II S VR++ G VGF++++ R NVALTRA+ LW
Sbjct: 297 AYETHGGFTVKVRSVDGFQGAEEDIIIFSAVRSNTTGSVGFLSNVNRTNVALTRAKHCLW 356
Query: 177 VMGNAGALTQSDDWAA 192
++GNA L S D A
Sbjct: 357 ILGNANTLASSKDHLA 372
>gi|325189081|emb|CCA23608.1| ATPdependent helicase putative [Albugo laibachii Nc14]
gi|325189673|emb|CCA24157.1| ATPdependent helicase putative [Albugo laibachii Nc14]
Length = 2194
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 86/230 (37%), Positives = 130/230 (56%), Gaps = 29/230 (12%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVI--------NLPDEVYYKDPVLRPYVFFD 53
+L VQYRMHP +R+FPS FY G+LTD +V+ NL + +Y++ P++ +
Sbjct: 1823 MLRVQYRMHPFMREFPSDRFYDGQLTDGSAVLQRMRNVRWNLYEHLYFQ-----PFLLYH 1877
Query: 54 VIHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVT----VGIITPYKLQLK 109
V E GS N DEAKF V L + G ++T +G ++PYK Q+
Sbjct: 1878 VETSSEESVNGSKC--NRDEAKFCVDLCVSMLDEAGRNGAPRLTSQWSIGFVSPYKEQVH 1935
Query: 110 CLQHEF-RNVL--------NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVA 159
L+ + R+VL N++ + +NTVD FQG+E+D+I+ S VR+S+ G +GF+
Sbjct: 1936 ALRRQVQRSVLSQWLATSPNAQAAVSVEVNTVDGFQGREKDMIVFSSVRSSSRGGIGFLR 1995
Query: 160 DIRRMNVALTRARRALWVMGNAGALTQSDDWAALIADSKARNCYMDMDSL 209
DIRR+NVA+TRAR L+V+GN L + WAA + ++ R +D L
Sbjct: 1996 DIRRLNVAITRARYCLFVVGNTNTLKRDRTWAAFVKSAEDRQLVVDTRGL 2045
>gi|425767683|gb|EKV06249.1| Regulator of nonsense transcript, putative [Penicillium digitatum
PHI26]
gi|425780378|gb|EKV18385.1| Regulator of nonsense transcript, putative [Penicillium digitatum
Pd1]
Length = 1079
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 85/261 (32%), Positives = 136/261 (52%), Gaps = 18/261 (6%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLRPYVFFDVIHGRESH 61
L+VQYRMHP + +FPS FY+G L + ++ + + +V + P++ + F G E
Sbjct: 651 LNVQYRMHPCLSEFPSNMFYEGSLQNGITIADRVRRDVDFPWPIIDDPMMFWSNLGNEEI 710
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFR--NVL 119
SY N EA E + G+ +GIITPY+ Q + +
Sbjct: 711 SASGTSYLNRTEATN----VEKIVTRFFKAGVQPRDIGIITPYEGQRSYIVSSMQATGTF 766
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
E K++ + +VDAFQG+E+D II+SCVR+++H G+GF++D RR+NVALTRAR L ++
Sbjct: 767 KKEHYKEIEVASVDAFQGREKDYIILSCVRSNDHQGIGFLSDPRRLNVALTRARFGLVIL 826
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD--MDSLPKEFSVALAAKAPGYGPLQGKI----- 231
GN L++ W L+ K R+C ++ + +L + K GP + ++
Sbjct: 827 GNPKVLSKHPLWNCLLQHFKERHCLVEGPLSNLQESLIQFSRPKQAYRGPQRFQMSFSQT 886
Query: 232 ---PHNARGLRSAGQRHRSFD 249
P+NA R+ G R+ D
Sbjct: 887 SNAPNNAVNGRNGGHRNEYHD 907
>gi|440632949|gb|ELR02868.1| regulator-nonsense transcripts 1 [Geomyces destructans 20631-21]
Length = 1099
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 115/207 (55%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLRPYVFFDVIHGRESH 61
L+VQYRMHP + +FPS FY+G L + ++ L +V + PV + F G E
Sbjct: 678 LNVQYRMHPCLSEFPSNMFYEGSLQNGVTMQQRLRRDVDFPWPVGDTPMMFWSNLGNEEI 737
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV--L 119
SY N EA E + G+ +G+ITPY+ Q + +N
Sbjct: 738 SASGTSYLNRTEASN----VEKIVTRFFKAGVQPADIGVITPYEGQRSYVVSSMQNTGTF 793
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
E K++ + +VDAFQG+E+D I++SCVR+++H G+GF++D RR+NVALTRA+ L ++
Sbjct: 794 KKENYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLVIL 853
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN L++ W L+ K RNC ++
Sbjct: 854 GNPKVLSKHPLWHYLLQHFKERNCLVE 880
>gi|224126379|ref|XP_002329539.1| predicted protein [Populus trichocarpa]
gi|222870248|gb|EEF07379.1| predicted protein [Populus trichocarpa]
Length = 1242
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 76/207 (36%), Positives = 116/207 (56%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDE-VYYKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + +FPS +FY+G L + +V + + PV +FF V G+E
Sbjct: 713 LQVQYRMHPCLSEFPSNNFYEGTLQNGVTVNERQSSGIDFPWPVPNRPMFFYVQMGQEEI 772
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLK-CLQHEFRN-VL 119
SY N EA E + T G+ +G+ITPY+ Q + + RN L
Sbjct: 773 SASGTSYLNRTEA----ANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGAL 828
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+ K++ + +VD+FQG+E+D II+SCVR++ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 829 RQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVIL 888
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN L++ W +L+ K C ++
Sbjct: 889 GNPKVLSKQPLWNSLLTHYKEHECLVE 915
>gi|356551976|ref|XP_003544348.1| PREDICTED: uncharacterized protein LOC100806346 [Glycine max]
Length = 975
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 79/212 (37%), Positives = 123/212 (58%), Gaps = 9/212 (4%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLP-DEVYYKDPVLRPYVFFDVIHGRES 60
+L+VQYRMHP I FP FY +++D +V+ +E + + + Y F +V G+E
Sbjct: 738 MLNVQYRMHPSISLFPFSEFYDEKISDGPNVLERSYNERFLEGEMYGSYSFINVSKGKEQ 797
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKT-LKSMGLGKVTVGIITPYKLQLKCLQHEFRNVL 119
G S +N+ EA + L+K L+S KV++GII+PY Q+ ++ +
Sbjct: 798 FGRGGYSSKNMVEAAVISEIIRSLKKEYLRSRK--KVSIGIISPYNAQVYEIKEKVEKY- 854
Query: 120 NSEEGKDLY--INTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALW 176
NS D + +VD FQG E D+II+S VR++ G VGF+++ +R NVALTRAR LW
Sbjct: 855 NSVSFPDFSFSVRSVDGFQGGEEDIIIISTVRSNGSGKVGFLSNRQRANVALTRARYCLW 914
Query: 177 VMGNAGALTQSDD-WAALIADSKARNCYMDMD 207
++GNA L SD W ++ D+K R+C+ + +
Sbjct: 915 IIGNATTLVNSDSVWRKVVLDAKIRDCFYNAE 946
>gi|397569654|gb|EJK46882.1| hypothetical protein THAOC_34429 [Thalassiosira oceanica]
Length = 1051
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 113/200 (56%), Gaps = 12/200 (6%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN------LPDEVYYKDPVLRPYVFFDVI 55
LL QYRMHP I FP R FY G+L D +V + L ++ +P+ D +
Sbjct: 797 LLDTQYRMHPMISLFPRRIFYDGKLLDGPNVKHPEYGSPLKRTIFRSFGAFQPFTILD-L 855
Query: 56 HGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEF 115
E G S++ N EA+ + L+++L+ + G V +ITPY Q L+ F
Sbjct: 856 ESTEDRAGTSMA--NTAEAQLALHLFQNLRSA--TGGQLGSRVAVITPYSQQAALLRRTF 911
Query: 116 RNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRA 174
+ L SE + + I++VDAFQG+E ++I SCVRA+ + G+GF+AD+RRMNVALTRA+
Sbjct: 912 SSGLGSEYERSVEISSVDAFQGREAHIVIFSCVRAAGSKGIGFLADVRRMNVALTRAKHF 971
Query: 175 LWVMGNAGALTQSDDWAALI 194
L+V+ ++ + W L+
Sbjct: 972 LFVIARCSSIRVNPYWRDLV 991
>gi|297794533|ref|XP_002865151.1| low-level beta-amylase 1 [Arabidopsis lyrata subsp. lyrata]
gi|297310986|gb|EFH41410.1| low-level beta-amylase 1 [Arabidopsis lyrata subsp. lyrata]
Length = 1253
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 76/207 (36%), Positives = 114/207 (55%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDE-VYYKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + +FPS FY+G L + ++I + + PV +FF V G+E
Sbjct: 718 LQVQYRMHPALSEFPSNSFYEGTLQNGVTIIERQTTGIDFPWPVPNRPMFFYVQLGQEEI 777
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLK-CLQHEFRN-VL 119
SY N EA E L G+ +G+ITPY+ Q + + RN L
Sbjct: 778 SASGTSYLNRTEAAN----VEKLVTAFLKSGVVPSQIGVITPYEGQRAYIVNYMARNGSL 833
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+ K++ + +VD+FQG+E+D II+SCVR++ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 834 RQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVIL 893
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN L++ W L+ K C ++
Sbjct: 894 GNPKVLSKQPLWNGLLTHYKEHECLVE 920
>gi|30695086|ref|NP_199512.2| Regulator of nonsense transcripts 1-like protein [Arabidopsis
thaliana]
gi|88984684|sp|Q9FJR0.2|RENT1_ARATH RecName: Full=Regulator of nonsense transcripts 1 homolog; AltName:
Full=ATP-dependent helicase UPF1
gi|332008074|gb|AED95457.1| Regulator of nonsense transcripts 1-like protein [Arabidopsis
thaliana]
Length = 1254
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 76/207 (36%), Positives = 114/207 (55%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDE-VYYKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + +FPS FY+G L + ++I + + PV +FF V G+E
Sbjct: 718 LQVQYRMHPALSEFPSNSFYEGTLQNGVTIIERQTTGIDFPWPVPNRPMFFYVQLGQEEI 777
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLK-CLQHEFRN-VL 119
SY N EA E L G+ +G+ITPY+ Q + + RN L
Sbjct: 778 SASGTSYLNRTEA----ANVEKLVTAFLKSGVVPSQIGVITPYEGQRAYIVNYMARNGSL 833
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+ K++ + +VD+FQG+E+D II+SCVR++ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 834 RQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVIL 893
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN L++ W L+ K C ++
Sbjct: 894 GNPKVLSKQPLWNGLLTHYKEHECLVE 920
>gi|121701377|ref|XP_001268953.1| regulator of nonsense transcripts, putative [Aspergillus clavatus
NRRL 1]
gi|119397096|gb|EAW07527.1| regulator of nonsense transcripts, putative [Aspergillus clavatus
NRRL 1]
Length = 1079
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 76/207 (36%), Positives = 115/207 (55%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLRPYVFFDVIHGRESH 61
L+VQYRMHP + FPS FY+G L + S I+ L +V + PV+ + F G E
Sbjct: 653 LNVQYRMHPCLSQFPSNMFYEGSLQNGVSAIDRLRRDVDFPWPVVDSPMMFWSNLGNEEI 712
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFR--NVL 119
SY N EA E + G+ +GIITPY+ Q + +
Sbjct: 713 SASGTSYLNRTEATN----VEKIVTRFFKAGVHPQDIGIITPYEGQRSYIVSSMQANGTF 768
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
E K++ + +VDAFQG+E+D II+SCVR+++H G+GF++D RR+NVALTRA+ L ++
Sbjct: 769 KKEHYKEIEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLVIL 828
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN L++ W L+ K ++C ++
Sbjct: 829 GNPKVLSKHPLWNCLLQHFKEQHCLVE 855
>gi|19569060|gb|AAL92018.1| UPF1 [Arabidopsis thaliana]
Length = 1243
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 76/207 (36%), Positives = 114/207 (55%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDE-VYYKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + +FPS FY+G L + ++I + + PV +FF V G+E
Sbjct: 707 LQVQYRMHPALSEFPSNSFYEGTLQNGVTIIERQTTGIDFPWPVPNRPMFFYVQLGQEEI 766
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLK-CLQHEFRN-VL 119
SY N EA E L G+ +G+ITPY+ Q + + RN L
Sbjct: 767 SASGTSYLNRTEA----ANVEKLVTAFLKSGVVPSQIGVITPYEGQRAYIVNYMARNGSL 822
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+ K++ + +VD+FQG+E+D II+SCVR++ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 823 RQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVIL 882
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN L++ W L+ K C ++
Sbjct: 883 GNPKVLSKQPLWNGLLTHYKEHECLVE 909
>gi|9759443|dbj|BAB10240.1| prematurely terminated mRNA decay factor-like protein [Arabidopsis
thaliana]
Length = 1235
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 76/207 (36%), Positives = 114/207 (55%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDE-VYYKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + +FPS FY+G L + ++I + + PV +FF V G+E
Sbjct: 715 LQVQYRMHPALSEFPSNSFYEGTLQNGVTIIERQTTGIDFPWPVPNRPMFFYVQLGQEEI 774
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLK-CLQHEFRN-VL 119
SY N EA E L G+ +G+ITPY+ Q + + RN L
Sbjct: 775 SASGTSYLNRTEA----ANVEKLVTAFLKSGVVPSQIGVITPYEGQRAYIVNYMARNGSL 830
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+ K++ + +VD+FQG+E+D II+SCVR++ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 831 RQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVIL 890
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN L++ W L+ K C ++
Sbjct: 891 GNPKVLSKQPLWNGLLTHYKEHECLVE 917
>gi|356497066|ref|XP_003517385.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Glycine
max]
Length = 1266
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/207 (36%), Positives = 115/207 (55%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDE-VYYKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + +FPS FY+G L + +V + + PV +FF V G+E
Sbjct: 712 LQVQYRMHPCLSEFPSNSFYEGTLQNGVTVNERKSSGIDFPWPVPNRPMFFYVQMGQEEI 771
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLK-CLQHEFRN-VL 119
SY N EA E + T G+ +G+ITPY+ Q + + RN L
Sbjct: 772 SASGTSYLNRTEA----ANVEKIVTTFLKSGVVPSQIGVITPYEGQRAYIVNYMSRNGAL 827
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+ K++ + +VD+FQG+E+D II+SCVR++ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 828 RQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVIL 887
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN L++ W +L+ K C ++
Sbjct: 888 GNPKVLSKQPLWNSLLTHYKEHECLVE 914
>gi|405124191|gb|AFR98953.1| helicase sen1 [Cryptococcus neoformans var. grubii H99]
Length = 2142
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/223 (34%), Positives = 117/223 (52%), Gaps = 22/223 (9%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LLS+QYRMHP I + PS+ FY G+L D S+ ++++ + PY FF+ I G E
Sbjct: 1792 LLSIQYRMHPFISELPSKVFYHGQLKDGPSMAKKTAAIWHQRNIFGPYRFFN-IEGTEMK 1850
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
G S +N EA V LY L + + +G+I+ Y+ QL L+ +F S
Sbjct: 1851 TG--TSTKNPAEALAAVELYRRLSADFGTRVNLAMRIGVISMYREQLWELKRKFTEAFGS 1908
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGNA 181
+ + NTVD FQGQE+D+II+S RMNVALTRA+ +L++ GN
Sbjct: 1909 TILELVEFNTVDGFQGQEKDIIILS----------------RMNVALTRAKSSLFIFGNG 1952
Query: 182 GALTQSDD-WAALIADSKARNCYMDMDSLPKEFSVALAAKAPG 223
L +SD+ W ++ D++ R +++ DS F+ A P
Sbjct: 1953 STLERSDERWKIIVQDARDRGFFINYDS--TTFNTAFLEPPPS 1993
>gi|281210252|gb|EFA84419.1| helicase [Polysphondylium pallidum PN500]
Length = 1113
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/281 (33%), Positives = 141/281 (50%), Gaps = 21/281 (7%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY--YKDPVLRPY--VFFDVIHGR 58
L+ QYRMHP + +FPS FY+G+L + ++ D VY K P P +FF G
Sbjct: 750 LTTQYRMHPSLSEFPSSTFYEGQLVNE---LSYKDRVYNDIKFPWPSPNNPMFFYNSTGA 806
Query: 59 ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV 118
E S+ N EA E + L +G +GIITPY+ Q L + +
Sbjct: 807 EEISSSGTSFINRMEAS----TTEKIVTKLLELGTKPHQIGIITPYEGQRSFLVNNMQKT 862
Query: 119 --LNSEEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRAL 175
L+ E +++ + +VD+FQG+E+D II+SCVR++ N G+GF+ D RR+NVALTRAR L
Sbjct: 863 GKLSIELYREIEVASVDSFQGREKDFIILSCVRSNDNQGIGFLHDPRRLNVALTRARYGL 922
Query: 176 WVMGNAGALTQSDDWAALIADSKARNCYMD--MDSLPKEFSVALAAKAPGYG----PLQG 229
++GNA L++ W LI K++ ++ + +L K+ V L YG P+ G
Sbjct: 923 IILGNARVLSRDQLWNNLICHFKSKEVLVEGTIQNL-KQSMVVLQKPKKLYGEGKLPVPG 981
Query: 230 KIPHNARGLRSAGQRHRSFDMNMESRSGTPSEDDEKVSRNG 270
P GQ + MNM P D + + G
Sbjct: 982 AQPTGFNPYGDYGQVDPTHGMNMVYGQKPPKYYDPRQQQGG 1022
>gi|307207583|gb|EFN85248.1| Regulator of nonsense transcripts 1 [Harpegnathos saltator]
Length = 1108
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/200 (38%), Positives = 115/200 (57%), Gaps = 16/200 (8%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRL-----TDSESVINLPDEVYYKDPVLRPYVFFDVIHG 57
L VQYRMHP + FPS FY+G L D ++ ++ + PV +FF V G
Sbjct: 669 LEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLL----KIDFPWPVQDKPMFFYVTQG 724
Query: 58 RESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCL-QH-EF 115
+E G SY N EA E + G+ +G+ITPY+ Q L QH ++
Sbjct: 725 QEEIAGSGTSYLNRTEASN----VEKITTRFLRCGVKSEQIGVITPYEGQRAFLVQHMQY 780
Query: 116 RNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRA 174
+ L+S+ +++ + +VDAFQG+E+D+IIMSCVR++ H G+GF+ D RR+NVALTRA+
Sbjct: 781 QGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRLNVALTRAKYG 840
Query: 175 LWVMGNAGALTQSDDWAALI 194
+ ++GN L++ W L+
Sbjct: 841 IIIVGNPKVLSKQALWNHLL 860
>gi|356541331|ref|XP_003539131.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Glycine
max]
Length = 1270
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/207 (36%), Positives = 115/207 (55%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDE-VYYKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + +FPS FY+G L + +V + + PV +FF V G+E
Sbjct: 715 LQVQYRMHPCLSEFPSNSFYEGTLQNGVTVNERQSSGIDFPWPVPNRPMFFYVQMGQEEI 774
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLK-CLQHEFRN-VL 119
SY N EA E + T G+ +G+ITPY+ Q + + RN L
Sbjct: 775 SASGTSYLNRTEA----ANVEKIVTTFLKSGVVPSQIGVITPYEGQRAYIVNYMSRNGAL 830
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+ K++ + +VD+FQG+E+D II+SCVR++ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 831 RQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVIL 890
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN L++ W +L+ K C ++
Sbjct: 891 GNPKVLSKQPLWNSLLTHYKEHECLVE 917
>gi|449464902|ref|XP_004150168.1| PREDICTED: LOW QUALITY PROTEIN: regulator of nonsense transcripts 1
homolog [Cucumis sativus]
Length = 1246
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 115/207 (55%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDE-VYYKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + +FPS FY+G L + ++ + + PV +FF V G+E
Sbjct: 712 LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSTGIDFPWPVPNRPMFFYVQMGQEEI 771
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLK-CLQHEFRN-VL 119
SY N EA E + T G+ +G+ITPY+ Q + + RN L
Sbjct: 772 SASGTSYLNRTEA----ANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGAL 827
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+ K++ + +VD+FQG+E+D II+SCVR++ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 828 RQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVIL 887
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN L++ W +L+ K C ++
Sbjct: 888 GNPKVLSKQPLWNSLLTHYKEHECLVE 914
>gi|14521437|ref|NP_126913.1| DNA helicase, [Pyrococcus abyssi GE5]
gi|5458655|emb|CAB50143.1| DNA helicase, putative [Pyrococcus abyssi GE5]
Length = 653
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 126/220 (57%), Gaps = 27/220 (12%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESV--INLPDEVYYKDP------VLRP---YV 50
+L VQYRM+ I +FPS+ FY G++ ESV I L D V Y+ P +L P V
Sbjct: 443 MLVVQYRMNERIMEFPSKEFYGGKIIADESVRGITLRDLVEYQSPNDSWGKILNPENVIV 502
Query: 51 FFDVIHGR---ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQ 107
F D E R GS S +N EA+ + + L S+G+ +G+ITPY Q
Sbjct: 503 FIDTSKAENKWERQRRGSESRENPLEAEIVAKIVDKLL----SIGVKPEWIGVITPYDDQ 558
Query: 108 LKCLQHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNV 166
R++++ + +D+ + TVD +QG+E++VII+S VR++ G +GF+ D+RR+NV
Sbjct: 559 --------RDLISMKVPEDVEVKTVDGYQGREKEVIILSLVRSNKLGEIGFLKDLRRLNV 610
Query: 167 ALTRARRALWVMGNAGALTQSDDWAALIADSKARNCYMDM 206
+LTRA+R L V+G++ L+ + + +I K + C+++
Sbjct: 611 SLTRAKRKLIVVGDSSTLSSHETYKKMIEFFKEKGCFIEF 650
>gi|429965384|gb|ELA47381.1| hypothetical protein VCUG_01150 [Vavraia culicis 'floridensis']
Length = 1568
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 125/198 (63%), Gaps = 17/198 (8%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
+LL+VQYRMHP I +FP+++FY+ RL +S+ + Y++ + P + F I+G E
Sbjct: 1364 VLLNVQYRMHPLIVEFPNQYFYRARLLTHKSIQKRQNP--YENVI--PPISFIQINGEEK 1419
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
S+ N++EA++ + L + +K+ +GIITPYK Q+K ++ ++
Sbjct: 1420 -TDNCFSFYNIEEAQYIGSIISELMEQVKNYDFFN-KIGIITPYKAQMKKIKEVLLSI-- 1475
Query: 121 SEEGKDLY----INTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALW 176
+D++ +NTVD FQGQE+DVI++S V++ N +GF++D+RR+NV++TRA+ +L
Sbjct: 1476 ---RQDIFDFVCVNTVDGFQGQEKDVILISTVKSKN--MGFLSDVRRINVSITRAKHSLI 1530
Query: 177 VMGNAGALTQSDDWAALI 194
++GN+ L+ S W +++
Sbjct: 1531 IIGNSKVLSSSGAWKSML 1548
>gi|380742039|tpe|CCE70673.1| TPA: DNA helicase, putative [Pyrococcus abyssi GE5]
Length = 629
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 126/220 (57%), Gaps = 27/220 (12%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESV--INLPDEVYYKDP------VLRP---YV 50
+L VQYRM+ I +FPS+ FY G++ ESV I L D V Y+ P +L P V
Sbjct: 419 MLVVQYRMNERIMEFPSKEFYGGKIIADESVRGITLRDLVEYQSPNDSWGKILNPENVIV 478
Query: 51 FFDVIHGR---ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQ 107
F D E R GS S +N EA+ + + L S+G+ +G+ITPY Q
Sbjct: 479 FIDTSKAENKWERQRRGSESRENPLEAEIVAKIVDKLL----SIGVKPEWIGVITPYDDQ 534
Query: 108 LKCLQHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNV 166
R++++ + +D+ + TVD +QG+E++VII+S VR++ G +GF+ D+RR+NV
Sbjct: 535 --------RDLISMKVPEDVEVKTVDGYQGREKEVIILSLVRSNKLGEIGFLKDLRRLNV 586
Query: 167 ALTRARRALWVMGNAGALTQSDDWAALIADSKARNCYMDM 206
+LTRA+R L V+G++ L+ + + +I K + C+++
Sbjct: 587 SLTRAKRKLIVVGDSSTLSSHETYKKMIEFFKEKGCFIEF 626
>gi|50509972|dbj|BAD30435.1| putative type 1 RNA helicase [Oryza sativa Japonica Group]
gi|222637078|gb|EEE67210.1| hypothetical protein OsJ_24327 [Oryza sativa Japonica Group]
Length = 1277
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/207 (37%), Positives = 115/207 (55%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDE-VYYKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + DFPS FY+G L + +V + + PV +FF V G+E
Sbjct: 742 LQVQYRMHPCLSDFPSNCFYEGTLQNGVTVNERQTPGIDFPWPVPNRPMFFYVQMGQEEI 801
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLK-CLQHEFRN-VL 119
SY N EA E + T G+ +G+ITPY+ Q + + RN L
Sbjct: 802 SASGTSYLNRTEAAN----VEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGSL 857
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+ K++ + +VD+FQG+E+D II+SCVR++ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 858 RQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVIL 917
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN L++ W +L+ K C ++
Sbjct: 918 GNPKVLSKQPLWNSLLTHYKEHECLVE 944
>gi|21410895|gb|AAH30916.1| Upf1 protein, partial [Mus musculus]
Length = 543
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/207 (37%), Positives = 116/207 (56%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY-YKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + FPS FY+G L + + + + + ++ P +FF V G+E
Sbjct: 123 LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEI 182
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
SY N EA E + L G +GIITPY+ Q L +F L
Sbjct: 183 ASSGTSYLNRTEA----ANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSL 238
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+++ +++ I +VDAFQG+E+D II+SCVRA+ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 239 HTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIV 298
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN AL++ W L++ K + ++
Sbjct: 299 GNPKALSKQPLWNHLLSYYKEQKALVE 325
>gi|449511522|ref|XP_004163978.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Cucumis
sativus]
Length = 1268
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 115/207 (55%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDE-VYYKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + +FPS FY+G L + ++ + + PV +FF V G+E
Sbjct: 712 LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSTGIDFPWPVPNRPMFFYVQMGQEEI 771
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLK-CLQHEFRN-VL 119
SY N EA E + T G+ +G+ITPY+ Q + + RN L
Sbjct: 772 SASGTSYLNRTEA----ANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGAL 827
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+ K++ + +VD+FQG+E+D II+SCVR++ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 828 RQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVIL 887
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN L++ W +L+ K C ++
Sbjct: 888 GNPKVLSKQPLWNSLLTHYKEHECLVE 914
>gi|218199657|gb|EEC82084.1| hypothetical protein OsI_26082 [Oryza sativa Indica Group]
Length = 1277
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/207 (37%), Positives = 115/207 (55%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDE-VYYKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + DFPS FY+G L + +V + + PV +FF V G+E
Sbjct: 742 LQVQYRMHPCLSDFPSNCFYEGTLQNGVTVNERQTPGIDFPWPVPNRPMFFYVQMGQEEI 801
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLK-CLQHEFRN-VL 119
SY N EA E + T G+ +G+ITPY+ Q + + RN L
Sbjct: 802 SASGTSYLNRTEAAN----VEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGSL 857
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+ K++ + +VD+FQG+E+D II+SCVR++ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 858 RQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVIL 917
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN L++ W +L+ K C ++
Sbjct: 918 GNPKVLSKQPLWNSLLTHYKEHECLVE 944
>gi|359473525|ref|XP_003631315.1| PREDICTED: uncharacterized protein LOC100265010 [Vitis vinifera]
Length = 2792
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 115/209 (55%), Gaps = 5/209 (2%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLP-DEVYYKDPVLRPYVFFDVIHGRES 60
LL+VQYRMHP I FP+ FY ++ D+ +V + + Y P+ Y F +V G+E
Sbjct: 654 LLNVQYRMHPSISFFPNSKFYFNQILDAPNVKSKSYTKHYLSGPMFGSYSFINV-RGKEE 712
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
H S +N+ E + + +L K K+++G+I+PY Q+ +Q +
Sbjct: 713 HDDVGKSRKNMIEVAIVIKIVRNLYKEWSGSN-QKLSIGVISPYAAQVVAIQDKLGQKYE 771
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVMG 179
+ + TVD FQG E D+II+ VR++ G +GF+++ +R NVALTRAR LW++G
Sbjct: 772 KLGNFSVKVKTVDGFQGGEEDIIIICTVRSNTGGSIGFLSNPQRTNVALTRARYCLWILG 831
Query: 180 NAGALTQSDD-WAALIADSKARNCYMDMD 207
N L S+ W L+ D+K R C+ + D
Sbjct: 832 NERTLANSESIWEDLVLDAKKRKCFFNAD 860
>gi|169763354|ref|XP_001727577.1| regulator of nonsense transcripts 1 [Aspergillus oryzae RIB40]
gi|238489245|ref|XP_002375860.1| regulator of nonsense transcripts, putative [Aspergillus flavus
NRRL3357]
gi|83770605|dbj|BAE60738.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220698248|gb|EED54588.1| regulator of nonsense transcripts, putative [Aspergillus flavus
NRRL3357]
gi|391869636|gb|EIT78831.1| RNA helicase nonsense mRNA reducing factor [Aspergillus oryzae
3.042]
Length = 1072
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/208 (37%), Positives = 117/208 (56%), Gaps = 10/208 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVL-RPYVFFDVIHGRES 60
L+VQYRMHP + +FPS FY+G L + S I L +V + P+ P +F+ + G E
Sbjct: 646 LNVQYRMHPCLSEFPSNMFYEGSLQNGISSIERLRRDVDFPWPISDNPMMFWSNL-GNEE 704
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFR--NV 118
SY N EA E + G+ +GIITPY+ Q + +
Sbjct: 705 ISASGTSYLNRTEATN----VEKIVTRFFKAGVQPGDIGIITPYEGQRSYIVSSMQATGT 760
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWV 177
E K++ + +VDAFQG+E+D II+SCVR+++H G+GF++D RR+NVALTRA+ L +
Sbjct: 761 FKKEHYKEIEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLAI 820
Query: 178 MGNAGALTQSDDWAALIADSKARNCYMD 205
+GN L++ W L+ K R+C ++
Sbjct: 821 LGNPKVLSKHPLWNCLLQHFKERHCLVE 848
>gi|328709620|ref|XP_003244017.1| PREDICTED: regulator of nonsense transcripts 1-like [Acyrthosiphon
pisum]
Length = 1125
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/207 (36%), Positives = 115/207 (55%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLP-DEVYYKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + FPS FY+G L + + ++ + PV + F V G+E
Sbjct: 677 LEVQYRMHPELSRFPSNFFYEGSLQNGVCADDRKLSKIEFPWPVADKPMLFYVTQGQEEI 736
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
G SY N EA E + G+ +GIITPY+ Q L +++ L
Sbjct: 737 AGSGTSYLNRTEAAN----VEKIATRFLRCGVKPDQIGIITPYEGQRAYLVQYMQYQAPL 792
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
++ +++ I +VDAFQG+E+D+IIMSCVR++ H G+GF+ D RR+NVALTRA+ + ++
Sbjct: 793 PAKVYQEIEIASVDAFQGREKDLIIMSCVRSNEHQGIGFLNDPRRLNVALTRAKYGILIV 852
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN L++ W L+ KA N ++
Sbjct: 853 GNPKVLSKQQLWNHLLNYYKANNVLVE 879
>gi|378734810|gb|EHY61269.1| regulator-nonsense transcripts 1 [Exophiala dermatitidis
NIH/UT8656]
Length = 1076
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 116/207 (56%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLRPYVFFDVIHGRESH 61
L+VQYRMHP + +FPS FY+G L + ++ + L +V + PV + F G E
Sbjct: 667 LNVQYRMHPCLSEFPSNMFYEGSLQNGVTMQDRLRPDVDFPWPVADSPMMFWSNLGNEEI 726
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRN--VL 119
SY N EA E + G+ ++G+ITPY+ Q + +
Sbjct: 727 SASGTSYLNRTEAAN----VEKIVTRFFKAGVHPQSIGVITPYEGQRSFIVSSMQTNGTF 782
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
E K++ + +VDAFQG+E+D II+SCVR+++H G+GF++D RR+NVALTRA+ L ++
Sbjct: 783 KKELYKEIEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLVIL 842
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN L++ W L+ K RNC ++
Sbjct: 843 GNPKVLSKHPLWHYLLLHFKERNCLVE 869
>gi|297738288|emb|CBI27489.3| unnamed protein product [Vitis vinifera]
Length = 2562
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 115/209 (55%), Gaps = 5/209 (2%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLP-DEVYYKDPVLRPYVFFDVIHGRES 60
LL+VQYRMHP I FP+ FY ++ D+ +V + + Y P+ Y F +V G+E
Sbjct: 600 LLNVQYRMHPSISFFPNSKFYFNQILDAPNVKSKSYTKHYLSGPMFGSYSFINV-RGKEE 658
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
H S +N+ E + + +L K K+++G+I+PY Q+ +Q +
Sbjct: 659 HDDVGKSRKNMIEVAIVIKIVRNLYKEWSGSN-QKLSIGVISPYAAQVVAIQDKLGQKYE 717
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVMG 179
+ + TVD FQG E D+II+ VR++ G +GF+++ +R NVALTRAR LW++G
Sbjct: 718 KLGNFSVKVKTVDGFQGGEEDIIIICTVRSNTGGSIGFLSNPQRTNVALTRARYCLWILG 777
Query: 180 NAGALTQSDD-WAALIADSKARNCYMDMD 207
N L S+ W L+ D+K R C+ + D
Sbjct: 778 NERTLANSESIWEDLVLDAKKRKCFFNAD 806
>gi|115472199|ref|NP_001059698.1| Os07g0495900 [Oryza sativa Japonica Group]
gi|113611234|dbj|BAF21612.1| Os07g0495900, partial [Oryza sativa Japonica Group]
Length = 1121
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/207 (37%), Positives = 115/207 (55%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDE-VYYKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + DFPS FY+G L + +V + + PV +FF V G+E
Sbjct: 586 LQVQYRMHPCLSDFPSNCFYEGTLQNGVTVNERQTPGIDFPWPVPNRPMFFYVQMGQEEI 645
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLK-CLQHEFRN-VL 119
SY N EA E + T G+ +G+ITPY+ Q + + RN L
Sbjct: 646 SASGTSYLNRTEAAN----VEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGSL 701
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+ K++ + +VD+FQG+E+D II+SCVR++ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 702 RQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVIL 761
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN L++ W +L+ K C ++
Sbjct: 762 GNPKVLSKQPLWNSLLTHYKEHECLVE 788
>gi|440792662|gb|ELR13871.1| mRNA decay factorlike protein [Acanthamoeba castellanii str. Neff]
Length = 1142
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/213 (36%), Positives = 119/213 (55%), Gaps = 20/213 (9%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTD-------SESVINLPDEVYYKDPVLRPYVFFDVI 55
L VQYRMHP + +FPS FY+G L + ++ ++ P V K P F++ +
Sbjct: 730 LQVQYRMHPCLSEFPSNTFYEGTLQNGVTAAERNQGALDFPWPVPNK-----PMFFYNCL 784
Query: 56 HGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEF 115
G+E SY N +EA VC E + G+ +G+ITPY+ Q L +
Sbjct: 785 -GQEEISSSGTSYLNRNEA--AVC--EKIVTHFLQAGVTSAQIGVITPYEGQRAYLVNYM 839
Query: 116 R--NVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRAR 172
+ L S+ K++ + +VD+FQG+E+D II+SCVR++ H G+GF+ D RR+NVALTRA+
Sbjct: 840 QRNGSLRSQLYKEIEVASVDSFQGREKDFIILSCVRSNEHQGIGFLNDPRRLNVALTRAK 899
Query: 173 RALWVMGNAGALTQSDDWAALIADSKARNCYMD 205
+ V+GNA L++ W L+ K C ++
Sbjct: 900 YGVVVLGNAKVLSRQPLWNNLLVHFKENGCLVE 932
>gi|320592037|gb|EFX04476.1| regulator of nonsense [Grosmannia clavigera kw1407]
Length = 1095
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/207 (35%), Positives = 113/207 (54%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLRPYVFFDVIHGRESH 61
L+VQYRMHPH+ FPS FY+G L + ++ L +V + PV+ + F G E
Sbjct: 681 LNVQYRMHPHLAAFPSNMFYEGSLQNGVTIQERLRKDVDFPWPVVDTPMMFWSNLGNEEI 740
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV--L 119
SY N EA E + G+ +G+ITPY+ Q + +N
Sbjct: 741 SASGTSYLNRTEASN----VEKVVTRFFKAGVKPADIGVITPYEGQRSYIVTTMQNTGTF 796
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRALWVM 178
E K++ + +VDAFQG+E+D I++SCVR++ N G+GF++D RR+NVALTRA+ + ++
Sbjct: 797 KKESYKEVEVASVDAFQGREKDYIVLSCVRSNENQGIGFLSDPRRLNVALTRAKYGIVIL 856
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN L + + W L+ K C ++
Sbjct: 857 GNPKVLAKHELWYHLLVHFKDHKCLVE 883
>gi|118349864|ref|XP_001008213.1| conserved hypothetical protein [Tetrahymena thermophila]
gi|89289980|gb|EAR87968.1| conserved hypothetical protein [Tetrahymena thermophila SB210]
Length = 1866
Score = 126 bits (316), Expect = 2e-26, Method: Composition-based stats.
Identities = 80/212 (37%), Positives = 117/212 (55%), Gaps = 15/212 (7%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
L QYRMHP+IR+FPS FY +L D SV N P Y + F D++ RE
Sbjct: 1151 FLDQQYRMHPNIREFPSIQFYDNKLKDGPSVANRPFPNYLQRLERFNTQFIDIVFSRE-- 1208
Query: 62 RGGSVSYQNVDE--AKFGVC--LYEHLQKTLKSMGLGK--VTVGIITPYKLQLKCLQHEF 115
+ SY+N E A +C + + +++ K K +++GIITPYK Q + +
Sbjct: 1209 KMNQKSYENEAEGLASISICNQIIDEIERQQKVQPESKETLSIGIITPYKQQTRLINELI 1268
Query: 116 RNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASN------HGVGFVADIRRMNVALT 169
R + K + +NTVD+FQGQE+D+II + VR ++ + +GF+ D RRMNVALT
Sbjct: 1269 RKQIPKSYHKFIQVNTVDSFQGQEKDIIIFTTVRVNSKQEWRENMIGFLQDERRMNVALT 1328
Query: 170 RARRALWVMGNAGALTQSDDWAALIADSKARN 201
RA+ L V+G+A L + W A + D A+N
Sbjct: 1329 RAKYCLIVLGHADTLNSNPVWGAFV-DFMAKN 1359
>gi|452987990|gb|EME87745.1| hypothetical protein MYCFIDRAFT_148374 [Pseudocercospora fijiensis
CIRAD86]
Length = 1091
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/207 (35%), Positives = 113/207 (54%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + +FPS FY+G L + ++ L +V + PV + F G E
Sbjct: 679 LQVQYRMHPCLSEFPSNMFYEGSLQNGITMQQRLRKDVDFPWPVADSPMMFWSNLGNEEI 738
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV--L 119
SY N EA+ E + G+ +GIITPY+ Q + +
Sbjct: 739 SASGTSYLNRTEAQN----VEKIVTRFFKAGVSPSAIGIITPYEGQRSYVVQSMQQTGTF 794
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
E K++ + +VDAFQG+E+D I++SCVR+++H G+GF++D RR+NVALTRA+ ++
Sbjct: 795 KKEHYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVALTRAKYGCVIL 854
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN L++ W L+ K RNC ++
Sbjct: 855 GNPKVLSKHPLWHYLLLHFKERNCLVE 881
>gi|332159100|ref|YP_004424379.1| dna2-nam7 helicase family protein [Pyrococcus sp. NA2]
gi|331034563|gb|AEC52375.1| dna2-nam7 helicase family protein [Pyrococcus sp. NA2]
Length = 655
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/223 (36%), Positives = 126/223 (56%), Gaps = 27/223 (12%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESV--INLPDEVYYKDP------VLRP---YV 50
+L+VQYRM+ I +FPS+ FY GR+ ESV I L D D +L+P V
Sbjct: 443 MLTVQYRMNERIMEFPSKEFYGGRIAADESVKDITLRDLGILVDSSDMWAEILKPENVLV 502
Query: 51 FFDVIHGR---ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQ 107
F D E R GS S +N EAK + E L + +G+ K +GIITPY Q
Sbjct: 503 FIDTSKAENKWERQRRGSESRENPLEAKIVSEIVERLLR----IGVKKEWIGIITPYDDQ 558
Query: 108 LKCLQHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNV 166
R++++ +D+ + TVD +QG+E++VII+S VR++ G +GF+ D+RR+NV
Sbjct: 559 --------RDLISLNVPEDVEVKTVDGYQGREKEVIILSFVRSNKAGEIGFLKDLRRLNV 610
Query: 167 ALTRARRALWVMGNAGALTQSDDWAALIADSKARNCYMDMDSL 209
+LTRARR L ++G++ L+ + + LI K + ++D+ L
Sbjct: 611 SLTRARRKLIIVGDSSTLSSHETYRRLIEFIKEKGLFVDVLKL 653
>gi|410129749|dbj|BAM64828.1| hypothetical protein [Beta vulgaris]
Length = 1296
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/224 (35%), Positives = 125/224 (55%), Gaps = 10/224 (4%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLP-DEVYYKDPVLRPYVFFDVIHGRES 60
LL QYRMHP I FP+ FY ++ D+ +V ++ + + + Y F +V G+E+
Sbjct: 780 LLKTQYRMHPSISSFPNEVFYGKQIIDAPNVKERSYEKCFLHENMFGTYSFINVSKGKEN 839
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEF--RNV 118
G S +N+ EA + L G KV+VG+I+PYK Q+ ++ + + V
Sbjct: 840 FDKG-YSPRNLVEAAVVNKIIAKLFNEHCITG-KKVSVGVISPYKGQVGLIEEKIGKKYV 897
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWV 177
+ G + + +VD FQG E DVII+S VR++ G VGF+++ +R NVALTRAR LW+
Sbjct: 898 TYKDHGFSVSVRSVDGFQGGEEDVIIISSVRSNGKGSVGFLSNHQRTNVALTRARHCLWI 957
Query: 178 MGNAGALTQSDD-WAALIADSKARNCYMDMDS---LPKEFSVAL 217
+GN L S+ W L+ D+K R C+ + + L K ++AL
Sbjct: 958 VGNGTTLINSESVWKELVVDAKLRGCFYNAEENKDLDKAITIAL 1001
>gi|344241326|gb|EGV97429.1| Regulator of nonsense transcripts 1 [Cricetulus griseus]
Length = 771
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/207 (37%), Positives = 116/207 (56%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY-YKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + FPS FY+G L + + + + + ++ P +FF V G+E
Sbjct: 351 LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEI 410
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
SY N EA E + L G +GIITPY+ Q L +F L
Sbjct: 411 ASSGTSYLNRTEA----ANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSL 466
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+++ +++ I +VDAFQG+E+D II+SCVRA+ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 467 HTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIV 526
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN AL++ W L++ K + ++
Sbjct: 527 GNPKALSKQPLWNHLLSYYKEQKALVE 553
>gi|361128156|gb|EHL00106.1| putative Regulator of nonsense transcripts 1 like protein [Glarea
lozoyensis 74030]
Length = 898
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 114/207 (55%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLRPYVFFDVIHGRESH 61
L+VQYRMHP + FPS FY+G L + ++ L +V + PV + F G E
Sbjct: 482 LNVQYRMHPCLSQFPSNMFYEGSLQNGVTMQQRLRRDVDFPWPVGDTPMMFWSNLGNEEI 541
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV--L 119
SY N EA E + G+ +G+ITPY+ Q + +N
Sbjct: 542 SASGTSYLNRTEASN----VEKIVTRFFKAGVQPQDIGVITPYEGQRSFVVSSMQNTGTF 597
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
E K++ + +VDAFQG+E+D I++SCVR+++H G+GF++D RR+NVALTRA+ L ++
Sbjct: 598 KKENYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLVIL 657
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN L++ W L+ K RNC ++
Sbjct: 658 GNPKVLSKHPLWHYLLLHFKERNCLVE 684
>gi|48727634|gb|AAT46119.1| RENT1 [Mus musculus]
Length = 1113
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/207 (37%), Positives = 116/207 (56%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY-YKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + FPS FY+G L + + + + + ++ P +FF V G+E
Sbjct: 693 LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEI 752
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
SY N EA E + L G +GIITPY+ Q L +F L
Sbjct: 753 ASSGTSYLNRTEAAN----VEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSL 808
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+++ +++ I +VDAFQG+E+D II+SCVRA+ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 809 HTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIV 868
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN AL++ W L++ K + ++
Sbjct: 869 GNPKALSKQPLWNHLLSYYKEQKALVE 895
>gi|169615114|ref|XP_001800973.1| hypothetical protein SNOG_10712 [Phaeosphaeria nodorum SN15]
gi|160702890|gb|EAT82106.2| hypothetical protein SNOG_10712 [Phaeosphaeria nodorum SN15]
Length = 1078
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/208 (37%), Positives = 118/208 (56%), Gaps = 10/208 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVL-RPYVFFDVIHGRES 60
L VQYRMHP + +FPS FY+G L + ++ + +V + PV P +F+ + E
Sbjct: 668 LQVQYRMHPCLSEFPSNMFYEGSLQNGVTMQERIRRDVDFPWPVADSPMMFWSNLGAEEI 727
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV-- 118
G+ SY N EA+ E + G+ +GIITPY+ Q + +
Sbjct: 728 SASGT-SYLNRTEAQN----VEKIVTRFFKAGVQPGDIGIITPYEGQRSYVVSSMQATGS 782
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWV 177
E KD+ + +VDAFQG+E+D II+SCVR+++H G+GF++D RR+NVALTRA+ L +
Sbjct: 783 FKKENYKDVEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLVI 842
Query: 178 MGNAGALTQSDDWAALIADSKARNCYMD 205
+GN L++ W L+ K RNC ++
Sbjct: 843 LGNPKVLSKHPLWHYLLLHFKERNCLVE 870
>gi|170784813|ref|NP_001116301.1| regulator of nonsense transcripts 1 isoform a [Mus musculus]
gi|150387852|sp|Q9EPU0.2|RENT1_MOUSE RecName: Full=Regulator of nonsense transcripts 1; AltName:
Full=ATP-dependent helicase RENT1; AltName:
Full=Nonsense mRNA reducing factor 1; Short=NORF1;
AltName: Full=Up-frameshift suppressor 1 homolog;
Short=mUpf1
gi|33989570|gb|AAH56442.1| Upf1 protein [Mus musculus]
Length = 1124
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/207 (37%), Positives = 116/207 (56%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY-YKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + FPS FY+G L + + + + + ++ P +FF V G+E
Sbjct: 704 LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEI 763
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
SY N EA E + L G +GIITPY+ Q L +F L
Sbjct: 764 ASSGTSYLNRTEAAN----VEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSL 819
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+++ +++ I +VDAFQG+E+D II+SCVRA+ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 820 HTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIV 879
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN AL++ W L++ K + ++
Sbjct: 880 GNPKALSKQPLWNHLLSYYKEQKALVE 906
>gi|12836885|gb|AAK08652.1|AF182947_1 nonsense mRNA reducing factor 1 NORF1 [Mus musculus]
Length = 1113
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/207 (37%), Positives = 116/207 (56%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY-YKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + FPS FY+G L + + + + + ++ P +FF V G+E
Sbjct: 693 LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEI 752
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
SY N EA E + L G +GIITPY+ Q L +F L
Sbjct: 753 ASSGTSYLNRTEAAN----VEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSL 808
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+++ +++ I +VDAFQG+E+D II+SCVRA+ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 809 HTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIV 868
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN AL++ W L++ K + ++
Sbjct: 869 GNPKALSKQPLWNHLLSYYKEQKALVE 895
>gi|170784811|ref|NP_109605.2| regulator of nonsense transcripts 1 isoform b [Mus musculus]
gi|11993646|gb|AAG42830.1|AF322655_1 regulator of nonsense transcripts 1 [Mus musculus]
gi|30354613|gb|AAH52149.1| UPF1 regulator of nonsense transcripts homolog (yeast) [Mus
musculus]
gi|148696867|gb|EDL28814.1| UPF1 regulator of nonsense transcripts homolog (yeast), isoform
CRA_b [Mus musculus]
Length = 1113
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/207 (37%), Positives = 116/207 (56%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY-YKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + FPS FY+G L + + + + + ++ P +FF V G+E
Sbjct: 693 LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEI 752
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
SY N EA E + L G +GIITPY+ Q L +F L
Sbjct: 753 ASSGTSYLNRTEAAN----VEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSL 808
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+++ +++ I +VDAFQG+E+D II+SCVRA+ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 809 HTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIV 868
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN AL++ W L++ K + ++
Sbjct: 869 GNPKALSKQPLWNHLLSYYKEQKALVE 895
>gi|392333562|ref|XP_003752928.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 2
[Rattus norvegicus]
gi|392353859|ref|XP_003751614.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 1
[Rattus norvegicus]
Length = 1124
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/207 (37%), Positives = 116/207 (56%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY-YKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + FPS FY+G L + + + + + ++ P +FF V G+E
Sbjct: 704 LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEI 763
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
SY N EA E + L G +GIITPY+ Q L +F L
Sbjct: 764 ASSGTSYLNRTEAAN----VEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSL 819
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+++ +++ I +VDAFQG+E+D II+SCVRA+ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 820 HTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIV 879
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN AL++ W L++ K + ++
Sbjct: 880 GNPKALSKQPLWNHLLSYYKEQKALVE 906
>gi|148696866|gb|EDL28813.1| UPF1 regulator of nonsense transcripts homolog (yeast), isoform
CRA_a [Mus musculus]
Length = 1131
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/207 (37%), Positives = 116/207 (56%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY-YKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + FPS FY+G L + + + + + ++ P +FF V G+E
Sbjct: 711 LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEI 770
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
SY N EA E + L G +GIITPY+ Q L +F L
Sbjct: 771 ASSGTSYLNRTEAAN----VEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSL 826
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+++ +++ I +VDAFQG+E+D II+SCVRA+ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 827 HTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIV 886
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN AL++ W L++ K + ++
Sbjct: 887 GNPKALSKQPLWNHLLSYYKEQKALVE 913
>gi|109504000|ref|XP_001070971.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 1
[Rattus norvegicus]
gi|392353861|ref|XP_003751615.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 2
[Rattus norvegicus]
gi|149036014|gb|EDL90680.1| rCG38820 [Rattus norvegicus]
Length = 1113
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/207 (37%), Positives = 116/207 (56%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY-YKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + FPS FY+G L + + + + + ++ P +FF V G+E
Sbjct: 693 LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEI 752
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
SY N EA E + L G +GIITPY+ Q L +F L
Sbjct: 753 ASSGTSYLNRTEAAN----VEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSL 808
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+++ +++ I +VDAFQG+E+D II+SCVRA+ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 809 HTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIV 868
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN AL++ W L++ K + ++
Sbjct: 869 GNPKALSKQPLWNHLLSYYKEQKALVE 895
>gi|213408485|ref|XP_002175013.1| ATP-dependent helicase NAM7 [Schizosaccharomyces japonicus yFS275]
gi|212003060|gb|EEB08720.1| ATP-dependent helicase NAM7 [Schizosaccharomyces japonicus yFS275]
Length = 926
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 97/277 (35%), Positives = 141/277 (50%), Gaps = 27/277 (9%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLRPYVFFDVIHGRESH 61
L+VQYRMHP + +FPS FY+G L + + L + + P + F G+E
Sbjct: 625 LTVQYRMHPCLSEFPSNMFYEGTLQNGVTTAERLARYLDFPWPQPEEPLMFYANFGQEEI 684
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
SY N EA C E + G+ +GIITPY Q + +N N
Sbjct: 685 SASGTSYLNRTEA--STC--EKIVTQFFKAGVTPEQIGIITPYDGQRSYIVQYMQN--NG 738
Query: 122 EEGKDLY----INTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALW 176
KDLY + +VDAFQG+E+D II+SCVR+S H G+GF+++ RR+NVALTRAR +
Sbjct: 739 ALKKDLYKAVEVASVDAFQGREKDFIILSCVRSSEHQGIGFLSEPRRLNVALTRARYGVI 798
Query: 177 VMGNAGALTQSDDWAALIADSKARNCYMD--MDSLPKEFSVALAAKAPGYGPLQGKIPHN 234
V+GN L + W I + R ++ +++L K F + L AP PL K+P N
Sbjct: 799 VLGNPKVLAKHALWYHFIVHCRERGYLVEGPLNNLQK-FMLGL---APPIKPL--KLPRN 852
Query: 235 --ARGLRSAGQRHRSFD-----MNMESRSGTPSEDDE 264
A+ SAG + + +N+++ PS DE
Sbjct: 853 LVAQQPLSAGISAFTINTFAPFINLQNYYAVPSYIDE 889
>gi|328768162|gb|EGF78209.1| hypothetical protein BATDEDRAFT_35814 [Batrachochytrium
dendrobatidis JAM81]
Length = 1119
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/207 (36%), Positives = 120/207 (57%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + +FPS FY+G L + +V + E+ + PV + F G+E
Sbjct: 710 LQVQYRMHPCLSEFPSNMFYEGSLQNGVTVQERIRPEIDFPWPVHETPMIFYGSFGQEEI 769
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLK-CLQH-EFRNVL 119
SY N EA + + + + K LK+ G+ +GI+TPY+ Q +QH +F L
Sbjct: 770 AASGKSYLNRTEAAY---VEKVVTKFLKA-GVTPAQIGIVTPYEGQRAYVVQHMQFNGSL 825
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRALWVM 178
E K++ + +VD+FQG+E+D II++CVR++ N G+GF+ D RR+NVALTRA+ L ++
Sbjct: 826 KKELYKEIEVASVDSFQGREKDYIIVTCVRSNENQGIGFLVDPRRLNVALTRAKYGLVIV 885
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN L + W L+ + +C ++
Sbjct: 886 GNPKVLAKHPLWYQLLMTFREHSCLVE 912
>gi|242045720|ref|XP_002460731.1| hypothetical protein SORBIDRAFT_02g033940 [Sorghum bicolor]
gi|241924108|gb|EER97252.1| hypothetical protein SORBIDRAFT_02g033940 [Sorghum bicolor]
Length = 1269
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/207 (36%), Positives = 115/207 (55%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDE-VYYKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + +FPS FY+G L + +V + + PV +FF V G+E
Sbjct: 736 LQVQYRMHPCLSEFPSNCFYEGTLQNGVTVNERQSSGIDFPWPVPNRPMFFYVQMGQEEI 795
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLK-CLQHEFRN-VL 119
SY N EA E + T G+ +G+ITPY+ Q + + RN L
Sbjct: 796 SASGTSYLNRTEAAN----VEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGSL 851
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+ K++ + +VD+FQG+E+D II+SCVR++ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 852 RQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVIL 911
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN L++ W +L+ K C ++
Sbjct: 912 GNPKVLSKQPLWNSLLTHYKEHECLVE 938
>gi|354473860|ref|XP_003499150.1| PREDICTED: regulator of nonsense transcripts 1-like [Cricetulus
griseus]
Length = 1061
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/207 (37%), Positives = 116/207 (56%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY-YKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + FPS FY+G L + + + + + ++ P +FF V G+E
Sbjct: 641 LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEI 700
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
SY N EA E + L G +GIITPY+ Q L +F L
Sbjct: 701 ASSGTSYLNRTEAAN----VEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSL 756
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+++ +++ I +VDAFQG+E+D II+SCVRA+ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 757 HTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIV 816
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN AL++ W L++ K + ++
Sbjct: 817 GNPKALSKQPLWNHLLSYYKEQKALVE 843
>gi|163915642|gb|AAI57562.1| LOC100135270 protein [Xenopus (Silurana) tropicalis]
Length = 587
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 111/196 (56%), Gaps = 8/196 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY-YKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + FPS FY+G L + + + + + ++ P +FF V G+E
Sbjct: 166 LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEI 225
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
SY N EA E + L G +GIITPY+ Q L +F L
Sbjct: 226 ASSGTSYLNRTEA----ANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSL 281
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+++ +++ I +VDAFQG+E+D II+SCVRA+ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 282 HTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIV 341
Query: 179 GNAGALTQSDDWAALI 194
GN AL++ W L+
Sbjct: 342 GNPKALSKQPLWNHLL 357
>gi|147865014|emb|CAN78970.1| hypothetical protein VITISV_037587 [Vitis vinifera]
Length = 2676
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 117/209 (55%), Gaps = 5/209 (2%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLP-DEVYYKDPVLRPYVFFDVIHGRES 60
LL+VQYRMHP I FP+ FY ++ D+ +V + + Y P+ Y F +V G+E
Sbjct: 661 LLNVQYRMHPSISFFPNSKFYFNQILDAPNVKSKSYTKHYLSGPMFGSYSFINV-RGKEE 719
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
H S +N+ E + + +L K K+++G+++PY Q+ +Q
Sbjct: 720 HDDVGKSRKNMIEVAIVIKIVGNLYKEWSGSN-QKLSIGVVSPYAAQVVAVQDNLGEKYE 778
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVMG 179
+ + + + TVD FQ E D+II S VRA++HG +GF+++ +R NVALTRAR LW++G
Sbjct: 779 NLDNFAVKVKTVDGFQAGEEDIIIXSTVRANSHGSIGFLSNPQRTNVALTRARHCLWILG 838
Query: 180 NAGALTQSDD-WAALIADSKARNCYMDMD 207
N L +S+ W L+ D+K R + + D
Sbjct: 839 NERTLAKSESXWEDLVCDAKXRKRFFNAD 867
>gi|145240145|ref|XP_001392719.1| regulator of nonsense transcripts 1 [Aspergillus niger CBS 513.88]
gi|134077233|emb|CAK45574.1| unnamed protein product [Aspergillus niger]
Length = 1072
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/208 (36%), Positives = 116/208 (55%), Gaps = 10/208 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVL-RPYVFFDVIHGRES 60
L+VQYRMHP + +FPS FY+G L + S L +V + P+ P +F+ + G E
Sbjct: 646 LNVQYRMHPCLSEFPSNMFYEGSLQNGISSFERLRRDVDFPWPIADNPMMFWSNL-GNEE 704
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFR--NV 118
SY N EA E + G+ +GIITPY+ Q + +
Sbjct: 705 ISASGTSYLNRTEATN----VEKIVTRFFKAGVQPQDIGIITPYEGQRSYIVSSMQANGT 760
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWV 177
E K++ + +VDAFQG+E+D II+SCVR+++H G+GF++D RR+NVALTRA+ L +
Sbjct: 761 FKKEHYKEIEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLAI 820
Query: 178 MGNAGALTQSDDWAALIADSKARNCYMD 205
+GN L++ W L+ K R+C ++
Sbjct: 821 LGNPKVLSKHPLWNCLLQHFKERHCLVE 848
>gi|358371937|dbj|GAA88543.1| regulator of nonsense transcripts [Aspergillus kawachii IFO 4308]
Length = 1072
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/208 (36%), Positives = 116/208 (55%), Gaps = 10/208 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVL-RPYVFFDVIHGRES 60
L+VQYRMHP + +FPS FY+G L + S L +V + P+ P +F+ + G E
Sbjct: 646 LNVQYRMHPCLSEFPSNMFYEGSLQNGISSFERLRRDVDFPWPIADNPMMFWSNL-GNEE 704
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFR--NV 118
SY N EA E + G+ +GIITPY+ Q + +
Sbjct: 705 ISASGTSYLNRTEATN----VEKIVTRFFKAGVQPQDIGIITPYEGQRSYIVSSMQANGT 760
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWV 177
E K++ + +VDAFQG+E+D II+SCVR+++H G+GF++D RR+NVALTRA+ L +
Sbjct: 761 FKKEHYKEIEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLAI 820
Query: 178 MGNAGALTQSDDWAALIADSKARNCYMD 205
+GN L++ W L+ K R+C ++
Sbjct: 821 LGNPKVLSKHPLWNCLLQHFKERHCLVE 848
>gi|396485880|ref|XP_003842280.1| similar to regulator of nonsense transcripts 1 [Leptosphaeria
maculans JN3]
gi|312218856|emb|CBX98801.1| similar to regulator of nonsense transcripts 1 [Leptosphaeria
maculans JN3]
Length = 1080
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 115/207 (55%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + +FPS FY+G L + ++ + +V + PV+ + F G E
Sbjct: 667 LQVQYRMHPCLSEFPSNMFYEGSLQNGVTMQERIRRDVDFPWPVVDSPMMFWSNLGVEEI 726
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV--L 119
SY N EA+ E + G+ +GIITPY+ Q + +
Sbjct: 727 SASGTSYLNRTEAQN----VEKIVTRFFKAGVQPSDIGIITPYEGQRSYVVSSMQATGSF 782
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
E K++ + +VDAFQG+E+D II+SCVR+++H G+GF++D RR+NVALTRA+ L ++
Sbjct: 783 KKENYKEVEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLVIL 842
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN L++ W L+ K RNC ++
Sbjct: 843 GNPKVLSKHPLWHYLLLHFKERNCLVE 869
>gi|224138824|ref|XP_002326699.1| predicted protein [Populus trichocarpa]
gi|222834021|gb|EEE72498.1| predicted protein [Populus trichocarpa]
Length = 1256
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/284 (32%), Positives = 140/284 (49%), Gaps = 21/284 (7%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDE-VYYKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + +FPS FY+G L + +V + + PV +FF V G+E
Sbjct: 700 LQVQYRMHPSLSEFPSNSFYEGTLQNGVTVNERQSSGIDFPWPVPNRPMFFYVQMGQEEI 759
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGL--GKVTVGIITPYKLQLK-CLQHEFRN- 117
SY N EA E + T G+ + +G+ITPY+ Q + + RN
Sbjct: 760 SASGTSYLNRTEA----ANVEKIVTTFLRSGVVPSQACIGVITPYEGQRAYIVNYMSRNG 815
Query: 118 VLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALW 176
L + K++ + +VD+FQG+E+D II+SCVR++ H G+GF+ D RR+NVALTRAR +
Sbjct: 816 ALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIV 875
Query: 177 VMGNAGALTQSDDWAALIADSKARNCYMD--MDSLPKEFSVALAAKAPGYGPLQGKIPHN 234
++GN L++ W +L+ K C ++ +++L + K KI ++
Sbjct: 876 ILGNPKVLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMVQFQKPK---------KIYND 926
Query: 235 ARGLRSAGQRHRSFDMNMESRSGTPSEDDEKVSRNGNYRPFKPP 278
R G D S +P+ D G+Y P PP
Sbjct: 927 RRLFFGGGPGIIPNDNFGSVASASPNADRRNSRARGSYMPPAPP 970
>gi|350629790|gb|EHA18163.1| hypothetical protein ASPNIDRAFT_119246 [Aspergillus niger ATCC
1015]
Length = 1071
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/208 (36%), Positives = 116/208 (55%), Gaps = 10/208 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVL-RPYVFFDVIHGRES 60
L+VQYRMHP + +FPS FY+G L + S L +V + P+ P +F+ + G E
Sbjct: 646 LNVQYRMHPCLSEFPSNMFYEGSLQNGISSFERLRRDVDFPWPIADNPMMFWSNL-GNEE 704
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFR--NV 118
SY N EA E + G+ +GIITPY+ Q + +
Sbjct: 705 ISASGTSYLNRTEATN----VEKIVTRFFKAGVQPQDIGIITPYEGQRSYIVSSMQANGT 760
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWV 177
E K++ + +VDAFQG+E+D II+SCVR+++H G+GF++D RR+NVALTRA+ L +
Sbjct: 761 FKKEHYKEIEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLAI 820
Query: 178 MGNAGALTQSDDWAALIADSKARNCYMD 205
+GN L++ W L+ K R+C ++
Sbjct: 821 LGNPKVLSKHPLWNCLLQHFKERHCLVE 848
>gi|441628692|ref|XP_004089387.1| PREDICTED: LOW QUALITY PROTEIN: regulator of nonsense transcripts 1
[Nomascus leucogenys]
Length = 1163
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 111/196 (56%), Gaps = 8/196 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY-YKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + FPS FY+G L + + + + + ++ P +FF V G+E
Sbjct: 743 LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEI 802
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
SY N EA E + L G +GIITPY+ Q L +F L
Sbjct: 803 ASSGTSYLNRTEAAN----VEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSL 858
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+++ +++ I +VDAFQG+E+D II+SCVRA+ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 859 HTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIV 918
Query: 179 GNAGALTQSDDWAALI 194
GN AL++ W L+
Sbjct: 919 GNPKALSKQPLWNHLL 934
>gi|67516729|ref|XP_658250.1| hypothetical protein AN0646.2 [Aspergillus nidulans FGSC A4]
gi|40745995|gb|EAA65151.1| hypothetical protein AN0646.2 [Aspergillus nidulans FGSC A4]
Length = 1062
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/207 (36%), Positives = 113/207 (54%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDS-ESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
L+VQYRMHP + +FPS FY+G L + S L EV + P+L + F G E
Sbjct: 636 LNVQYRMHPCLSEFPSNMFYEGSLQNGITSFDRLRREVDFPWPILDSPMMFWSNLGNEEI 695
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFR--NVL 119
SY N EA E + G+ +GIITPY+ Q + +
Sbjct: 696 SASGTSYLNRTEAAN----VEKIVTRFFKAGVQPKDIGIITPYEGQRSYIVSSMQATGTF 751
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
E K++ + +VDAFQG+E+D II+SCVR+++H G+GF++D RR+NVALTRA+ L ++
Sbjct: 752 KKEHYKEIEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLVIL 811
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN L++ W L+ K R+ ++
Sbjct: 812 GNPKVLSKHPLWNCLLQHFKERHTLVE 838
>gi|168057212|ref|XP_001780610.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667976|gb|EDQ54593.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1687
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 88/219 (40%), Positives = 122/219 (55%), Gaps = 25/219 (11%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRP------------- 48
+L+ QYRMHP I +PS+ FY G L DS ++ + ++ V R
Sbjct: 892 MLTTQYRMHPSICCYPSQQFYGGALRDSTRTSSM--QSIFRQEVCREGINIRGCKFRLGH 949
Query: 49 YVFFDVIHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQL 108
Y F DV G E S N +EA + E + K L S GL K +G+ITPY Q
Sbjct: 950 YYFMDVGWGIEREEIVGHSRANFEEALVVCNVVEGVVKGLLS-GL-KPNLGVITPYIAQR 1007
Query: 109 KCL--QHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRA-SNHGVGFVADIRRMN 165
+ Q E R + +G +NTVD FQG+E+DVI++SCVRA ++ G+GFV+D RRMN
Sbjct: 1008 SEIEGQLERRGI----DGTACEVNTVDGFQGREKDVIVLSCVRAMADRGLGFVSDERRMN 1063
Query: 166 VALTRARRALWVMGNAGALTQ-SDDWAALIADSKARNCY 203
VALTRA+ +L ++G+A L + S W LI D++ R CY
Sbjct: 1064 VALTRAKFSLIIVGHAETLQKWSATWGLLIDDARKRGCY 1102
>gi|261201590|ref|XP_002628009.1| ATP-dependent helicase NAM7 [Ajellomyces dermatitidis SLH14081]
gi|239590106|gb|EEQ72687.1| ATP-dependent helicase NAM7 [Ajellomyces dermatitidis SLH14081]
gi|239611816|gb|EEQ88803.1| ATP-dependent helicase NAM7 [Ajellomyces dermatitidis ER-3]
gi|327352930|gb|EGE81787.1| ATP-dependent helicase NAM7 [Ajellomyces dermatitidis ATCC 18188]
Length = 1092
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/210 (36%), Positives = 116/210 (55%), Gaps = 14/210 (6%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRL----TDSESVINLPDEVYYKDPVLRPYVFFDVIHGR 58
L+VQYRMHP + +FPS FY G L T+SE ++ +V + PV + F G
Sbjct: 670 LNVQYRMHPCLSEFPSNMFYDGSLQNGVTESERLLK---DVDFPWPVAHNPMMFWSNLGN 726
Query: 59 ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFR-- 116
E SY N EA E + G+ ++GIITPY+ Q + +
Sbjct: 727 EEISASGTSYLNRTEAAN----VEKIVTRFFKAGVKPSSIGIITPYEGQRSYVVSSMQAT 782
Query: 117 NVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRAL 175
E K++ + +VDAFQG+E+D I++SCVR+++H G+GF++D RR+NVALTRA+ L
Sbjct: 783 GTFKKELYKEIEVASVDAFQGREKDYIVLSCVRSNDHQGIGFLSDPRRLNVALTRAKYGL 842
Query: 176 WVMGNAGALTQSDDWAALIADSKARNCYMD 205
++GN L++ W L+ K +NC ++
Sbjct: 843 VILGNPKVLSKHPLWNYLLLHFKEKNCLVE 872
>gi|194770581|ref|XP_001967370.1| GF21587 [Drosophila ananassae]
gi|190618050|gb|EDV33574.1| GF21587 [Drosophila ananassae]
Length = 1180
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/206 (35%), Positives = 112/206 (54%), Gaps = 7/206 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESHR 62
L VQYRMHP + FPS FY+G L + + ++ + P +FF V G+E
Sbjct: 679 LEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRLKLDFPWPQPERPMFFLVTQGQEEIA 738
Query: 63 GGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVLN 120
G S+ N EA E + G+ +GIITPY+ Q L +++ L+
Sbjct: 739 GSGTSFLNRTEAAN----VEKITTRFLKAGIKPEQIGIITPYEGQRAYLVQYMQYQGSLH 794
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASN-HGVGFVADIRRMNVALTRARRALWVMG 179
S +++ I +VDAFQG+E+D+IIMSCVR++ G+GF+ D RR+NVALTRA+ + ++G
Sbjct: 795 SRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIGFLNDPRRLNVALTRAKYGIIIVG 854
Query: 180 NAGALTQSDDWAALIADSKARNCYMD 205
N L + W L+ K R ++
Sbjct: 855 NPKVLAKQQLWNHLLNFYKDRKVLVE 880
>gi|310800151|gb|EFQ35044.1| RNA helicase [Glomerella graminicola M1.001]
Length = 1086
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/208 (35%), Positives = 118/208 (56%), Gaps = 10/208 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVL-RPYVFFDVIHGRES 60
L++QYRMHP + +FPS FY G L + +V + +V + PV+ P +F+ + G E
Sbjct: 676 LNIQYRMHPCLSEFPSNMFYDGSLQNGVTVRERVRRDVDFPWPVVDMPMMFWSNL-GNEE 734
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV-- 118
SY N EA E + G+ + +G+ITPY+ Q + +N
Sbjct: 735 ISASGTSYLNRTEASN----VEKVVTRFFKAGVKPLDIGVITPYEGQRSYIVSTMQNTGT 790
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRALWV 177
E K++ + +VDAFQG+E+D I++SCVR++ N G+GF++D RR+NVALTRA+ L +
Sbjct: 791 FKKESYKEVEVASVDAFQGREKDFIVLSCVRSNDNQGIGFLSDPRRLNVALTRAKYGLVI 850
Query: 178 MGNAGALTQSDDWAALIADSKARNCYMD 205
+GN L++ + W L+ K R C ++
Sbjct: 851 IGNPKVLSKHELWHHLLVHFKDRKCLVE 878
>gi|259489087|tpe|CBF89067.1| TPA: hypothetical protein similar to possible regulator of nonsense
transcripts (Broad) [Aspergillus nidulans FGSC A4]
Length = 1077
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/207 (36%), Positives = 113/207 (54%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDS-ESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
L+VQYRMHP + +FPS FY+G L + S L EV + P+L + F G E
Sbjct: 651 LNVQYRMHPCLSEFPSNMFYEGSLQNGITSFDRLRREVDFPWPILDSPMMFWSNLGNEEI 710
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFR--NVL 119
SY N EA E + G+ +GIITPY+ Q + +
Sbjct: 711 SASGTSYLNRTEAAN----VEKIVTRFFKAGVQPKDIGIITPYEGQRSYIVSSMQATGTF 766
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
E K++ + +VDAFQG+E+D II+SCVR+++H G+GF++D RR+NVALTRA+ L ++
Sbjct: 767 KKEHYKEIEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLVIL 826
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN L++ W L+ K R+ ++
Sbjct: 827 GNPKVLSKHPLWNCLLQHFKERHTLVE 853
>gi|195446723|ref|XP_002070897.1| GK25498 [Drosophila willistoni]
gi|194166982|gb|EDW81883.1| GK25498 [Drosophila willistoni]
Length = 1208
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/206 (35%), Positives = 113/206 (54%), Gaps = 7/206 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESHR 62
L VQYRMHP + FPS FY+G L + + ++ + P +FF V G+E
Sbjct: 684 LEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRLKLDFPWPQPERPMFFLVTQGQEEIA 743
Query: 63 GGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVLN 120
G S+ N EA E + G+ +GIITPY+ Q L +++ L+
Sbjct: 744 GSGTSFLNRTEAAN----VEKITTRFLKAGVKPEQIGIITPYEGQRAYLVQYMQYQGSLH 799
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASN-HGVGFVADIRRMNVALTRARRALWVMG 179
S +++ I +VDAFQG+E+D+IIMSCVR++ G+GF+ D RR+NVALTRA+ + ++G
Sbjct: 800 SRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIGFLNDPRRLNVALTRAKYGIIIVG 859
Query: 180 NAGALTQSDDWAALIADSKARNCYMD 205
N L++ W L+ K R ++
Sbjct: 860 NPKVLSKQQLWNHLLNFYKDRKVLVE 885
>gi|189207819|ref|XP_001940243.1| DNA-binding protein SMUBP-2 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187976336|gb|EDU42962.1| DNA-binding protein SMUBP-2 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 1079
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/208 (36%), Positives = 119/208 (57%), Gaps = 10/208 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVL-RPYVFFDVIHGRES 60
L VQYRMHP + +FPS FY+G L + ++ + +V + PV+ P +F+ + E
Sbjct: 667 LQVQYRMHPCLSEFPSNMFYEGSLQNGVTMQERIRRDVDFPWPVVDSPMMFWSNLGAEEI 726
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV-- 118
G+ SY N EA+ E + G+ +GIITPY+ Q + +
Sbjct: 727 SASGT-SYLNRTEAQN----VEKIVTRFFKAGVQPGDIGIITPYEGQRSYVVSSMQATGS 781
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWV 177
E K++ + +VDAFQG+E+D II+SCVR+++H G+GF++D RR+NVALTRA+ L +
Sbjct: 782 FKKENYKEVEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLVI 841
Query: 178 MGNAGALTQSDDWAALIADSKARNCYMD 205
+GN L++ W L+ K RNC ++
Sbjct: 842 LGNPKVLSKHPLWHYLLLHFKERNCLVE 869
>gi|71003407|ref|XP_756384.1| hypothetical protein UM00237.1 [Ustilago maydis 521]
gi|46095821|gb|EAK81054.1| hypothetical protein UM00237.1 [Ustilago maydis 521]
Length = 1088
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/208 (37%), Positives = 114/208 (54%), Gaps = 10/208 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLR-PYVFFDVIHGRES 60
L VQYRMHP + +FPS FY+G L + + L +V + PV P +FF + G+E
Sbjct: 701 LQVQYRMHPCLSEFPSNMFYEGTLQNGVTAPERLRKDVDFPWPVPSLPMLFFQNL-GQEE 759
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCL--QHEFRNV 118
S+ N EA E + G+ +GI+TPY+ Q + +
Sbjct: 760 ISSSGTSFLNRTEAAN----VEKIVTRFFKAGVKPSQIGIVTPYEGQRSYIVNHMQLHGS 815
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWV 177
L E KD+ + +VDAFQG+E+D II+SCVR++ H G+GF++D RR+NVALTRAR L +
Sbjct: 816 LKKELYKDVEVASVDAFQGREKDYIILSCVRSNEHQGIGFLSDPRRLNVALTRARFGLVI 875
Query: 178 MGNAGALTQSDDWAALIADSKARNCYMD 205
+GN L + W L+ K + C ++
Sbjct: 876 LGNPKVLNKHPLWHYLLVHYKEKGCLVE 903
>gi|426230268|ref|XP_004009198.1| PREDICTED: regulator of nonsense transcripts 1 [Ovis aries]
Length = 1341
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 111/196 (56%), Gaps = 8/196 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY-YKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + FPS FY+G L + + + + + ++ P +FF V G+E
Sbjct: 887 LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEI 946
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
SY N EA E + L G +GIITPY+ Q L +F L
Sbjct: 947 ASSGTSYLNRTEAAN----VEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSL 1002
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+++ +++ I +VDAFQG+E+D II+SCVRA+ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 1003 HTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIV 1062
Query: 179 GNAGALTQSDDWAALI 194
GN AL++ W L+
Sbjct: 1063 GNPKALSKQPLWNHLL 1078
>gi|195165354|ref|XP_002023504.1| GL20400 [Drosophila persimilis]
gi|194105609|gb|EDW27652.1| GL20400 [Drosophila persimilis]
Length = 879
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/206 (35%), Positives = 112/206 (54%), Gaps = 7/206 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESHR 62
L VQYRMHP + FPS FY+G L + + ++ + P +FF V G+E
Sbjct: 349 LEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRLKLDFPWPQPERPMFFLVTQGQEEIA 408
Query: 63 GGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVLN 120
G S+ N EA E + G+ +GIITPY+ Q L +++ L+
Sbjct: 409 GSGTSFLNRTEA----ANVEKITTRFLKAGVKPEQIGIITPYEGQRAYLVQYMQYQGSLH 464
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASN-HGVGFVADIRRMNVALTRARRALWVMG 179
S +++ I +VDAFQG+E+D+IIMSCVR++ G+GF+ D RR+NVALTRA+ + ++G
Sbjct: 465 SRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIGFLNDPRRLNVALTRAKYGIIIVG 524
Query: 180 NAGALTQSDDWAALIADSKARNCYMD 205
N L + W L+ K R ++
Sbjct: 525 NPKVLAKQQLWNHLLNFYKDRKVLVE 550
>gi|414886782|tpg|DAA62796.1| TPA: hypothetical protein ZEAMMB73_068361 [Zea mays]
Length = 1273
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/207 (36%), Positives = 115/207 (55%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDE-VYYKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + +FPS FY+G L + +V + + PV +FF V G+E
Sbjct: 736 LQVQYRMHPCLSEFPSNCFYEGTLQNGVTVNERHSSGIDFPWPVPNRPMFFYVQMGQEEI 795
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLK-CLQHEFRN-VL 119
SY N EA E + T G+ +G+ITPY+ Q + + RN L
Sbjct: 796 SASGTSYLNRTEAAN----VEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGSL 851
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+ K++ + +VD+FQG+E+D II+SCVR++ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 852 RQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVIL 911
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN L++ W +L+ K C ++
Sbjct: 912 GNPKVLSKQPLWNSLLTHYKEHECLVE 938
>gi|403303596|ref|XP_003942412.1| PREDICTED: regulator of nonsense transcripts 1 [Saimiri boliviensis
boliviensis]
Length = 1257
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 111/196 (56%), Gaps = 8/196 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY-YKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + FPS FY+G L + + + + + ++ P +FF V G+E
Sbjct: 837 LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEI 896
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
SY N EA E + L G +GIITPY+ Q L +F L
Sbjct: 897 ASSGTSYLNRTEAAN----VEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSL 952
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+++ +++ I +VDAFQG+E+D II+SCVRA+ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 953 HTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIV 1012
Query: 179 GNAGALTQSDDWAALI 194
GN AL++ W L+
Sbjct: 1013 GNPKALSKQPLWNHLL 1028
>gi|414886783|tpg|DAA62797.1| TPA: hypothetical protein ZEAMMB73_068361 [Zea mays]
Length = 1272
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/207 (36%), Positives = 115/207 (55%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDE-VYYKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + +FPS FY+G L + +V + + PV +FF V G+E
Sbjct: 736 LQVQYRMHPCLSEFPSNCFYEGTLQNGVTVNERHSSGIDFPWPVPNRPMFFYVQMGQEEI 795
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLK-CLQHEFRN-VL 119
SY N EA E + T G+ +G+ITPY+ Q + + RN L
Sbjct: 796 SASGTSYLNRTEAAN----VEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGSL 851
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+ K++ + +VD+FQG+E+D II+SCVR++ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 852 RQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVIL 911
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN L++ W +L+ K C ++
Sbjct: 912 GNPKVLSKQPLWNSLLTHYKEHECLVE 938
>gi|225558219|gb|EEH06503.1| ATP-dependent helicase NAM7 [Ajellomyces capsulatus G186AR]
gi|240277173|gb|EER40682.1| ATP-dependent helicase NAM7 [Ajellomyces capsulatus H143]
Length = 1071
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/210 (36%), Positives = 116/210 (55%), Gaps = 14/210 (6%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRL----TDSESVINLPDEVYYKDPVLRPYVFFDVIHGR 58
L+VQYRMHP + +FPS FY G L T+SE ++ +V + PV + F G
Sbjct: 649 LNVQYRMHPCLSEFPSNMFYDGSLQNGVTESERLLK---DVDFPWPVAHNPMMFWSNLGN 705
Query: 59 ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFR-- 116
E SY N EA E + G+ ++GIITPY+ Q + +
Sbjct: 706 EEISASGTSYLNRTEAAN----VEKIVTRFFKAGVKPSSIGIITPYEGQRSYVVSSMQAT 761
Query: 117 NVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRAL 175
E K++ + +VDAFQG+E+D I++SCVR+++H G+GF++D RR+NVALTRA+ L
Sbjct: 762 GTFKKELYKEIEVASVDAFQGREKDYIVLSCVRSNDHQGIGFLSDPRRLNVALTRAKYGL 821
Query: 176 WVMGNAGALTQSDDWAALIADSKARNCYMD 205
++GN L++ W L+ K +NC ++
Sbjct: 822 VILGNPKVLSKHPLWNYLLLHFKEKNCLVE 851
>gi|296233329|ref|XP_002761973.1| PREDICTED: regulator of nonsense transcripts 1, partial [Callithrix
jacchus]
Length = 1164
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 111/196 (56%), Gaps = 8/196 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY-YKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + FPS FY+G L + + + + + ++ P +FF V G+E
Sbjct: 744 LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEI 803
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
SY N EA E + L G +GIITPY+ Q L +F L
Sbjct: 804 ASSGTSYLNRTEAAN----VEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSL 859
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+++ +++ I +VDAFQG+E+D II+SCVRA+ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 860 HTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIV 919
Query: 179 GNAGALTQSDDWAALI 194
GN AL++ W L+
Sbjct: 920 GNPKALSKQPLWNHLL 935
>gi|226286939|gb|EEH42452.1| ATP-dependent helicase NAM7 [Paracoccidioides brasiliensis Pb18]
Length = 1087
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/210 (36%), Positives = 116/210 (55%), Gaps = 14/210 (6%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRL----TDSESVINLPDEVYYKDPVLRPYVFFDVIHGR 58
L+VQYRMHP + +FPS FY G L T+SE ++ +V + PV + F G
Sbjct: 665 LNVQYRMHPCLSEFPSNMFYDGSLQNGVTESERLLK---DVDFPWPVAHNPMMFWSNLGN 721
Query: 59 ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFR-- 116
E SY N EA E + G+ ++GIITPY+ Q + +
Sbjct: 722 EEISASGTSYLNRTEAAN----VEKIVTRFFKAGVKPSSIGIITPYEGQRSYVVSSMQAT 777
Query: 117 NVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRAL 175
E K++ + +VDAFQG+E+D I++SCVR+++H G+GF++D RR+NVALTRA+ L
Sbjct: 778 GTFKKELYKEIEVASVDAFQGREKDYIVLSCVRSNDHQGIGFLSDPRRLNVALTRAKYGL 837
Query: 176 WVMGNAGALTQSDDWAALIADSKARNCYMD 205
++GN L++ W L+ K +NC ++
Sbjct: 838 VILGNPKVLSKHPLWNYLLLHFKEKNCLVE 867
>gi|195480688|ref|XP_002101353.1| GE17585 [Drosophila yakuba]
gi|194188877|gb|EDX02461.1| GE17585 [Drosophila yakuba]
Length = 1187
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 74/206 (35%), Positives = 112/206 (54%), Gaps = 7/206 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESHR 62
L VQYRMHP + FPS FY+G L + + ++ + P +FF V G+E
Sbjct: 679 LEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRLKLDFPWPQPERPMFFLVTQGQEEIA 738
Query: 63 GGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVLN 120
G S+ N EA E + G+ +GIITPY+ Q L +++ L+
Sbjct: 739 GSGTSFLNRTEAAN----VEKITTRFLKAGIKPEQIGIITPYEGQRAYLVQYMQYQGSLH 794
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASN-HGVGFVADIRRMNVALTRARRALWVMG 179
S +++ I +VDAFQG+E+D+IIMSCVR++ G+GF+ D RR+NVALTRA+ + ++G
Sbjct: 795 SRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIGFLNDPRRLNVALTRAKYGIIIVG 854
Query: 180 NAGALTQSDDWAALIADSKARNCYMD 205
N L + W L+ K R ++
Sbjct: 855 NPKVLAKQQLWNHLLNFYKDRKVLVE 880
>gi|154285820|ref|XP_001543705.1| ATP-dependent helicase NAM7 [Ajellomyces capsulatus NAm1]
gi|150407346|gb|EDN02887.1| ATP-dependent helicase NAM7 [Ajellomyces capsulatus NAm1]
Length = 1088
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/210 (36%), Positives = 116/210 (55%), Gaps = 14/210 (6%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRL----TDSESVINLPDEVYYKDPVLRPYVFFDVIHGR 58
L+VQYRMHP + +FPS FY G L T+SE ++ +V + PV + F G
Sbjct: 666 LNVQYRMHPCLSEFPSNMFYDGSLQNGVTESERLLK---DVDFPWPVAHNPMMFWSNLGN 722
Query: 59 ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFR-- 116
E SY N EA E + G+ ++GIITPY+ Q + +
Sbjct: 723 EEISASGTSYLNRTEAAN----VEKIVTRFFKAGVKPSSIGIITPYEGQRSYVVSSMQAT 778
Query: 117 NVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRAL 175
E K++ + +VDAFQG+E+D I++SCVR+++H G+GF++D RR+NVALTRA+ L
Sbjct: 779 GTFKKELYKEIEVASVDAFQGREKDYIVLSCVRSNDHQGIGFLSDPRRLNVALTRAKYGL 838
Query: 176 WVMGNAGALTQSDDWAALIADSKARNCYMD 205
++GN L++ W L+ K +NC ++
Sbjct: 839 VILGNPKVLSKHPLWNYLLLHFKEKNCLVE 868
>gi|325093995|gb|EGC47305.1| ATP-dependent helicase NAM7 [Ajellomyces capsulatus H88]
Length = 1071
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/210 (36%), Positives = 116/210 (55%), Gaps = 14/210 (6%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRL----TDSESVINLPDEVYYKDPVLRPYVFFDVIHGR 58
L+VQYRMHP + +FPS FY G L T+SE ++ +V + PV + F G
Sbjct: 649 LNVQYRMHPCLSEFPSNMFYDGSLQNGVTESERLLK---DVDFPWPVAHNPMMFWSNLGN 705
Query: 59 ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFR-- 116
E SY N EA E + G+ ++GIITPY+ Q + +
Sbjct: 706 EEISASGTSYLNRTEAAN----VEKIVTRFFKAGVKPSSIGIITPYEGQRSYVVSSMQAT 761
Query: 117 NVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRAL 175
E K++ + +VDAFQG+E+D I++SCVR+++H G+GF++D RR+NVALTRA+ L
Sbjct: 762 GTFKKELYKEIEVASVDAFQGREKDYIVLSCVRSNDHQGIGFLSDPRRLNVALTRAKYGL 821
Query: 176 WVMGNAGALTQSDDWAALIADSKARNCYMD 205
++GN L++ W L+ K +NC ++
Sbjct: 822 VILGNPKVLSKHPLWNYLLLHFKEKNCLVE 851
>gi|298707435|emb|CBJ30064.1| RNA helicase [Ectocarpus siliculosus]
Length = 1101
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/211 (36%), Positives = 118/211 (55%), Gaps = 16/211 (7%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRL----TDSESVINLPDEVYYKDPVLRPYVFFDVIHGR 58
L VQYRMHP + ++PS FY+G L T+ E V+ D+V + PV +FF + G
Sbjct: 735 LQVQYRMHPCLSEWPSNMFYEGTLQNGVTEGERVM---DQVDFPWPVPSKPMFFLMTTGV 791
Query: 59 ESHRGGSVSYQNVDEAK-FGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRN 117
E SY N EA C+ LQK G+ +G++TPY+ Q L +
Sbjct: 792 EEISSSGTSYLNRTEATAVEKCVTRFLQK-----GVTPDQIGVVTPYEGQRSYLVDHLQR 846
Query: 118 V--LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRA 174
L S ++ + +VD+FQG+E+D+I+++CVR++ H G+GF++D RR+NVALTRAR
Sbjct: 847 TGSLRSSLYSEIEVASVDSFQGREKDLILLTCVRSNEHQGIGFLSDPRRLNVALTRARFG 906
Query: 175 LWVMGNAGALTQSDDWAALIADSKARNCYMD 205
++GN L ++ W AL+ K C ++
Sbjct: 907 CIIIGNPRILAKNPLWNALVNFYKDHECLVE 937
>gi|225683333|gb|EEH21617.1| DNA-binding protein SMUBP-2 [Paracoccidioides brasiliensis Pb03]
Length = 1074
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/210 (36%), Positives = 116/210 (55%), Gaps = 14/210 (6%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRL----TDSESVINLPDEVYYKDPVLRPYVFFDVIHGR 58
L+VQYRMHP + +FPS FY G L T+SE ++ +V + PV + F G
Sbjct: 671 LNVQYRMHPCLSEFPSNMFYDGSLQNGVTESERLLK---DVDFPWPVAHNPMMFWSNLGN 727
Query: 59 ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFR-- 116
E SY N EA E + G+ ++GIITPY+ Q + +
Sbjct: 728 EEISASGTSYLNRTEAAN----VEKIVTRFFKAGVKPSSIGIITPYEGQRSYVVSSMQAT 783
Query: 117 NVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRAL 175
E K++ + +VDAFQG+E+D I++SCVR+++H G+GF++D RR+NVALTRA+ L
Sbjct: 784 GTFKKELYKEIEVASVDAFQGREKDYIVLSCVRSNDHQGIGFLSDPRRLNVALTRAKYGL 843
Query: 176 WVMGNAGALTQSDDWAALIADSKARNCYMD 205
++GN L++ W L+ K +NC ++
Sbjct: 844 VILGNPKVLSKHPLWNYLLLHFKEKNCLVE 873
>gi|195356067|ref|XP_002044503.1| GM13241 [Drosophila sechellia]
gi|194131805|gb|EDW53739.1| GM13241 [Drosophila sechellia]
Length = 1180
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 74/206 (35%), Positives = 112/206 (54%), Gaps = 7/206 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESHR 62
L VQYRMHP + FPS FY+G L + + ++ + P +FF V G+E
Sbjct: 679 LEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRLKLDFPWPQPERPMFFLVTQGQEEIA 738
Query: 63 GGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVLN 120
G S+ N EA E + G+ +GIITPY+ Q L +++ L+
Sbjct: 739 GSGTSFLNRTEAAN----VEKITTRFLKAGIKPEQIGIITPYEGQRAYLVQYMQYQGSLH 794
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASN-HGVGFVADIRRMNVALTRARRALWVMG 179
S +++ I +VDAFQG+E+D+IIMSCVR++ G+GF+ D RR+NVALTRA+ + ++G
Sbjct: 795 SRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIGFLNDPRRLNVALTRAKFGIIIVG 854
Query: 180 NAGALTQSDDWAALIADSKARNCYMD 205
N L + W L+ K R ++
Sbjct: 855 NPKVLAKQQLWNHLLNFYKDRKVLVE 880
>gi|414886784|tpg|DAA62798.1| TPA: hypothetical protein ZEAMMB73_068361 [Zea mays]
Length = 1205
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/207 (36%), Positives = 115/207 (55%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDE-VYYKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + +FPS FY+G L + +V + + PV +FF V G+E
Sbjct: 736 LQVQYRMHPCLSEFPSNCFYEGTLQNGVTVNERHSSGIDFPWPVPNRPMFFYVQMGQEEI 795
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLK-CLQHEFRN-VL 119
SY N EA E + T G+ +G+ITPY+ Q + + RN L
Sbjct: 796 SASGTSYLNRTEAAN----VEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGSL 851
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+ K++ + +VD+FQG+E+D II+SCVR++ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 852 RQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVIL 911
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN L++ W +L+ K C ++
Sbjct: 912 GNPKVLSKQPLWNSLLTHYKEHECLVE 938
>gi|1575536|gb|AAC50771.1| regulator of nonsense transcript stability [Homo sapiens]
Length = 1118
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/207 (37%), Positives = 115/207 (55%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY-YKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + FPS FY+G L + + + + + ++ P +FF V G+E
Sbjct: 698 LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEI 757
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
SY N EA E + L G +GIITPY+ Q L +F L
Sbjct: 758 ASSGTSYLNRTEAAN----VEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSL 813
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+++ +++ I +VDAFQG+E+D II+SCVRA+ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 814 HTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIV 873
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN AL++ W L+ K + ++
Sbjct: 874 GNPKALSKQPLWNHLLIFYKEQKVLVE 900
>gi|414886785|tpg|DAA62799.1| TPA: hypothetical protein ZEAMMB73_068361 [Zea mays]
Length = 1251
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/207 (36%), Positives = 115/207 (55%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDE-VYYKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + +FPS FY+G L + +V + + PV +FF V G+E
Sbjct: 736 LQVQYRMHPCLSEFPSNCFYEGTLQNGVTVNERHSSGIDFPWPVPNRPMFFYVQMGQEEI 795
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLK-CLQHEFRN-VL 119
SY N EA E + T G+ +G+ITPY+ Q + + RN L
Sbjct: 796 SASGTSYLNRTEAAN----VEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGSL 851
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+ K++ + +VD+FQG+E+D II+SCVR++ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 852 RQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVIL 911
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN L++ W +L+ K C ++
Sbjct: 912 GNPKVLSKQPLWNSLLTHYKEHECLVE 938
>gi|295657686|ref|XP_002789409.1| ATP-dependent helicase NAM7 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226283831|gb|EEH39397.1| ATP-dependent helicase NAM7 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1087
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/210 (36%), Positives = 116/210 (55%), Gaps = 14/210 (6%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRL----TDSESVINLPDEVYYKDPVLRPYVFFDVIHGR 58
L+VQYRMHP + +FPS FY G L T+SE ++ +V + PV + F G
Sbjct: 665 LNVQYRMHPCLSEFPSNMFYDGSLQNGVTESERLLK---DVDFPWPVAHNPMMFWSNLGN 721
Query: 59 ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFR-- 116
E SY N EA E + G+ ++GIITPY+ Q + +
Sbjct: 722 EEISASGTSYLNRTEAAN----VEKIVTRFFKAGVKPSSIGIITPYEGQRSYVVSSMQAT 777
Query: 117 NVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRAL 175
E K++ + +VDAFQG+E+D I++SCVR+++H G+GF++D RR+NVALTRA+ L
Sbjct: 778 GTFKKELYKEIEVASVDAFQGREKDYIVLSCVRSNDHQGIGFLSDPRRLNVALTRAKYGL 837
Query: 176 WVMGNAGALTQSDDWAALIADSKARNCYMD 205
++GN L++ W L+ K +NC ++
Sbjct: 838 VILGNPKVLSKHPLWNYLLLHFKEKNCLVE 867
>gi|168034946|ref|XP_001769972.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678693|gb|EDQ65148.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 699
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 61/122 (50%), Positives = 82/122 (67%), Gaps = 2/122 (1%)
Query: 100 IITPYKLQLKCLQHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFV 158
+ITPYK QL Q L S + ++ NTVD +QG+E D++I S VRAS+ G+GFV
Sbjct: 67 VITPYKQQLNVTQQRCSRSLGSAKALNIEFNTVDGYQGREVDILIFSTVRASDKPGIGFV 126
Query: 159 ADIRRMNVALTRARRALWVMGNAGALTQSDDWAALIADSKARNCYMDMDSLPKEFSVALA 218
ADIRRMNVALTRAR +LW++GNA A+ Q+ DW AL++D+K R Y + P F V +
Sbjct: 127 ADIRRMNVALTRARFSLWIVGNASAMQQNSDWGALLSDAKMRQSYFPIK-YPYSFQVGVN 185
Query: 219 AK 220
+K
Sbjct: 186 SK 187
>gi|297476262|ref|XP_002688572.1| PREDICTED: regulator of nonsense transcripts 1 [Bos taurus]
gi|296486196|tpg|DAA28309.1| TPA: UPF1 regulator of nonsense transcripts homolog [Bos taurus]
Length = 1116
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 111/196 (56%), Gaps = 8/196 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY-YKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + FPS FY+G L + + + + + ++ P +FF V G+E
Sbjct: 696 LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEI 755
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
SY N EA E + L G +GIITPY+ Q L +F L
Sbjct: 756 ASSGTSYLNRTEAAN----VEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSL 811
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+++ +++ I +VDAFQG+E+D II+SCVRA+ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 812 HTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIV 871
Query: 179 GNAGALTQSDDWAALI 194
GN AL++ W L+
Sbjct: 872 GNPKALSKQPLWNHLL 887
>gi|73986070|ref|XP_533868.2| PREDICTED: regulator of nonsense transcripts 1 [Canis lupus
familiaris]
Length = 1119
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 111/196 (56%), Gaps = 8/196 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY-YKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + FPS FY+G L + + + + + ++ P +FF V G+E
Sbjct: 699 LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEI 758
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
SY N EA E + L G +GIITPY+ Q L +F L
Sbjct: 759 ASSGTSYLNRTEAAN----VEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSL 814
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+++ +++ I +VDAFQG+E+D II+SCVRA+ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 815 HTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIV 874
Query: 179 GNAGALTQSDDWAALI 194
GN AL++ W L+
Sbjct: 875 GNPKALSKQPLWNHLL 890
>gi|358412841|ref|XP_001789963.2| PREDICTED: regulator of nonsense transcripts 1 [Bos taurus]
Length = 1063
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 111/196 (56%), Gaps = 8/196 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY-YKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + FPS FY+G L + + + + + ++ P +FF V G+E
Sbjct: 643 LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEI 702
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
SY N EA E + L G +GIITPY+ Q L +F L
Sbjct: 703 ASSGTSYLNRTEAAN----VEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSL 758
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+++ +++ I +VDAFQG+E+D II+SCVRA+ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 759 HTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIV 818
Query: 179 GNAGALTQSDDWAALI 194
GN AL++ W L+
Sbjct: 819 GNPKALSKQPLWNHLL 834
>gi|198468730|ref|XP_002134102.1| GA29178 [Drosophila pseudoobscura pseudoobscura]
gi|198146545|gb|EDY72729.1| GA29178 [Drosophila pseudoobscura pseudoobscura]
Length = 1209
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 74/206 (35%), Positives = 112/206 (54%), Gaps = 7/206 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESHR 62
L VQYRMHP + FPS FY+G L + + ++ + P +FF V G+E
Sbjct: 679 LEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRLKLDFPWPQPERPMFFLVTQGQEEIA 738
Query: 63 GGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVLN 120
G S+ N EA E + G+ +GIITPY+ Q L +++ L+
Sbjct: 739 GSGTSFLNRTEAAN----VEKITTRFLKAGVKPEQIGIITPYEGQRAYLVQYMQYQGSLH 794
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASN-HGVGFVADIRRMNVALTRARRALWVMG 179
S +++ I +VDAFQG+E+D+IIMSCVR++ G+GF+ D RR+NVALTRA+ + ++G
Sbjct: 795 SRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIGFLNDPRRLNVALTRAKYGIIIVG 854
Query: 180 NAGALTQSDDWAALIADSKARNCYMD 205
N L + W L+ K R ++
Sbjct: 855 NPKVLAKQQLWNHLLNFYKDRKVLVE 880
>gi|1885356|gb|AAC51140.1| homolog of yeast UPF1 [Homo sapiens]
Length = 1118
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 111/196 (56%), Gaps = 8/196 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY-YKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + FPS FY+G L + + + + + ++ P +FF V G+E
Sbjct: 698 LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEI 757
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
SY N EA E + L G +GIITPY+ Q L +F L
Sbjct: 758 ASSGTSYLNRTEAAN----VEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSL 813
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+++ +++ I +VDAFQG+E+D II+SCVRA+ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 814 HTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIV 873
Query: 179 GNAGALTQSDDWAALI 194
GN AL++ W L+
Sbjct: 874 GNPKALSKQPLWNHLL 889
>gi|344283632|ref|XP_003413575.1| PREDICTED: regulator of nonsense transcripts 1-like [Loxodonta
africana]
Length = 1117
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 111/196 (56%), Gaps = 8/196 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY-YKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + FPS FY+G L + + + + + ++ P +FF V G+E
Sbjct: 697 LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEI 756
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
SY N EA E + L G +GIITPY+ Q L +F L
Sbjct: 757 ASSGTSYLNRTEAAN----VEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSL 812
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+++ +++ I +VDAFQG+E+D II+SCVRA+ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 813 HTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIV 872
Query: 179 GNAGALTQSDDWAALI 194
GN AL++ W L+
Sbjct: 873 GNPKALSKQPLWNHLL 888
>gi|407927468|gb|EKG20360.1| ATPase AAA+ type core [Macrophomina phaseolina MS6]
Length = 1086
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 113/207 (54%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + +FPS FY+G L + + + + EV + PV + F G E
Sbjct: 665 LQVQYRMHPCLSEFPSNMFYEGSLQNGVTRESRMRKEVDFPWPVGDSPMMFWSNLGNEEI 724
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFR--NVL 119
SY N EA E + G+ +GIITPY+ Q + +
Sbjct: 725 SASGTSYLNRTEAAN----VEKIVTRFFKAGVKPQDIGIITPYEGQRSYVVQSMQANGTF 780
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
E K++ + +VDAFQG+E+D I++SCVR+++H G+GF++D RR+NVALTRA+ L ++
Sbjct: 781 KKENYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLVIL 840
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN L++ W L+ K RNC ++
Sbjct: 841 GNPKVLSKHPLWHYLLLHFKERNCLVE 867
>gi|40788920|dbj|BAA19664.2| KIAA0221 [Homo sapiens]
Length = 1151
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 111/196 (56%), Gaps = 8/196 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY-YKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + FPS FY+G L + + + + + ++ P +FF V G+E
Sbjct: 731 LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEI 790
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
SY N EA E + L G +GIITPY+ Q L +F L
Sbjct: 791 ASSGTSYLNRTEAAN----VEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSL 846
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+++ +++ I +VDAFQG+E+D II+SCVRA+ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 847 HTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIV 906
Query: 179 GNAGALTQSDDWAALI 194
GN AL++ W L+
Sbjct: 907 GNPKALSKQPLWNHLL 922
>gi|18375673|ref|NP_002902.2| regulator of nonsense transcripts 1 [Homo sapiens]
gi|2739355|gb|AAB94785.1| pNORF1 [Homo sapiens]
gi|3328175|gb|AAC26788.1| nonsense-mediated mRNA decay trans-acting factor [Homo sapiens]
gi|24981038|gb|AAH39817.1| UPF1 regulator of nonsense transcripts homolog (yeast) [Homo
sapiens]
gi|119605145|gb|EAW84739.1| UPF1 regulator of nonsense transcripts homolog (yeast), isoform
CRA_b [Homo sapiens]
gi|119605146|gb|EAW84740.1| UPF1 regulator of nonsense transcripts homolog (yeast), isoform
CRA_b [Homo sapiens]
gi|119605148|gb|EAW84742.1| UPF1 regulator of nonsense transcripts homolog (yeast), isoform
CRA_b [Homo sapiens]
gi|383420499|gb|AFH33463.1| regulator of nonsense transcripts 1 [Macaca mulatta]
gi|383420501|gb|AFH33464.1| regulator of nonsense transcripts 1 [Macaca mulatta]
gi|387540714|gb|AFJ70984.1| regulator of nonsense transcripts 1 [Macaca mulatta]
gi|410220482|gb|JAA07460.1| UPF1 regulator of nonsense transcripts homolog [Pan troglodytes]
gi|410307484|gb|JAA32342.1| UPF1 regulator of nonsense transcripts homolog [Pan troglodytes]
Length = 1118
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 111/196 (56%), Gaps = 8/196 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY-YKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + FPS FY+G L + + + + + ++ P +FF V G+E
Sbjct: 698 LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEI 757
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
SY N EA E + L G +GIITPY+ Q L +F L
Sbjct: 758 ASSGTSYLNRTEAAN----VEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSL 813
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+++ +++ I +VDAFQG+E+D II+SCVRA+ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 814 HTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIV 873
Query: 179 GNAGALTQSDDWAALI 194
GN AL++ W L+
Sbjct: 874 GNPKALSKQPLWNHLL 889
>gi|384939998|gb|AFI33604.1| regulator of nonsense transcripts 1 [Macaca mulatta]
gi|384940000|gb|AFI33605.1| regulator of nonsense transcripts 1 [Macaca mulatta]
Length = 1118
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 111/196 (56%), Gaps = 8/196 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY-YKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + FPS FY+G L + + + + + ++ P +FF V G+E
Sbjct: 698 LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEI 757
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
SY N EA E + L G +GIITPY+ Q L +F L
Sbjct: 758 ASSGTSYLNRTEAAN----VEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSL 813
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+++ +++ I +VDAFQG+E+D II+SCVRA+ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 814 HTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIV 873
Query: 179 GNAGALTQSDDWAALI 194
GN AL++ W L+
Sbjct: 874 GNPKALSKQPLWNHLL 889
>gi|17380291|sp|Q92900.2|RENT1_HUMAN RecName: Full=Regulator of nonsense transcripts 1; AltName:
Full=ATP-dependent helicase RENT1; AltName:
Full=Nonsense mRNA reducing factor 1; Short=NORF1;
AltName: Full=Up-frameshift suppressor 1 homolog;
Short=hUpf1
gi|119605144|gb|EAW84738.1| UPF1 regulator of nonsense transcripts homolog (yeast), isoform
CRA_a [Homo sapiens]
gi|119605147|gb|EAW84741.1| UPF1 regulator of nonsense transcripts homolog (yeast), isoform
CRA_a [Homo sapiens]
Length = 1129
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 111/196 (56%), Gaps = 8/196 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY-YKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + FPS FY+G L + + + + + ++ P +FF V G+E
Sbjct: 709 LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEI 768
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
SY N EA E + L G +GIITPY+ Q L +F L
Sbjct: 769 ASSGTSYLNRTEAAN----VEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSL 824
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+++ +++ I +VDAFQG+E+D II+SCVRA+ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 825 HTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIV 884
Query: 179 GNAGALTQSDDWAALI 194
GN AL++ W L+
Sbjct: 885 GNPKALSKQPLWNHLL 900
>gi|168274489|dbj|BAG09664.1| regulator of nonsense transcripts 1 [synthetic construct]
Length = 1129
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 111/196 (56%), Gaps = 8/196 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY-YKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + FPS FY+G L + + + + + ++ P +FF V G+E
Sbjct: 709 LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEI 768
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
SY N EA E + L G +GIITPY+ Q L +F L
Sbjct: 769 ASSGTSYLNRTEAAN----VEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSL 824
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+++ +++ I +VDAFQG+E+D II+SCVRA+ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 825 HTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIV 884
Query: 179 GNAGALTQSDDWAALI 194
GN AL++ W L+
Sbjct: 885 GNPKALSKQPLWNHLL 900
>gi|409082016|gb|EKM82374.1| hypothetical protein AGABI1DRAFT_111018 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 463
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/207 (36%), Positives = 118/207 (57%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + +FPS FY+G L + + L V + PV +FF G+E
Sbjct: 52 LQVQYRMHPCLSEFPSNMFYEGTLQNGVTAPERLRKNVDFPWPVPDTPMFFYQNLGQEEI 111
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
S+ N EA + + + K KS G+ +GI+TPY+ Q + + +F L
Sbjct: 112 SSSGTSFLNRTEAS---NVEKIVTKFFKS-GVVPNQIGIVTPYEGQRSYIVNYMQFNGSL 167
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+ K++ + +VDAFQG+E+D II+SCVR++ H G+GF+ D RR+NVALTRA+ + ++
Sbjct: 168 KKDLYKEIEVASVDAFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAKYGVVIL 227
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN L++ W L+ K +NC ++
Sbjct: 228 GNPKVLSKHPLWHYLLTHYKEKNCLVE 254
>gi|195553850|ref|XP_002076779.1| GD24645 [Drosophila simulans]
gi|194202769|gb|EDX16345.1| GD24645 [Drosophila simulans]
Length = 1180
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 74/206 (35%), Positives = 112/206 (54%), Gaps = 7/206 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESHR 62
L VQYRMHP + FPS FY+G L + + ++ + P +FF V G+E
Sbjct: 679 LEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRLKLDFPWPQPERPMFFLVTQGQEEIA 738
Query: 63 GGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVLN 120
G S+ N EA E + G+ +GIITPY+ Q L +++ L+
Sbjct: 739 GSGTSFLNRTEAAN----VEKITTRFLKAGIKPEQIGIITPYEGQRAYLVQYMQYQGSLH 794
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASN-HGVGFVADIRRMNVALTRARRALWVMG 179
S +++ I +VDAFQG+E+D+IIMSCVR++ G+GF+ D RR+NVALTRA+ + ++G
Sbjct: 795 SRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIGFLNDPRRLNVALTRAKFGIIIVG 854
Query: 180 NAGALTQSDDWAALIADSKARNCYMD 205
N L + W L+ K R ++
Sbjct: 855 NPKVLAKQQLWNHLLNFYKDRKVLVE 880
>gi|168016276|ref|XP_001760675.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688035|gb|EDQ74414.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1610
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 115/207 (55%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + +FPS FY+G L + + + L ++ + PV +FF V G+E
Sbjct: 975 LQVQYRMHPSLSEFPSNSFYEGTLQNGVTTSDRLLSQIDFPWPVPNRPMFFYVQMGQEEI 1034
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEF-RN-VL 119
SY N EA E + T G+ +G+ITPY+ Q + + RN L
Sbjct: 1035 SASGTSYLNRGEAGN----VEKIVTTFLKSGVVPAQIGVITPYEGQRAYIVNNMARNGSL 1090
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+ K++ + +VD+FQG+E+D II+SCVR++ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 1091 RQQLYKEIEVASVDSFQGREKDFIIVSCVRSNEHQGIGFLNDPRRLNVALTRARFGIVIL 1150
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN L++ W L+ K ++
Sbjct: 1151 GNPKVLSKQPLWNTLLTHYKEHEVLVE 1177
>gi|281343547|gb|EFB19131.1| hypothetical protein PANDA_000565 [Ailuropoda melanoleuca]
Length = 1122
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 111/196 (56%), Gaps = 8/196 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY-YKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + FPS FY+G L + + + + + ++ P +FF V G+E
Sbjct: 702 LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEI 761
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
SY N EA E + L G +GIITPY+ Q L +F L
Sbjct: 762 ASSGTSYLNRTEAAN----VEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSL 817
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+++ +++ I +VDAFQG+E+D II+SCVRA+ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 818 HTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIV 877
Query: 179 GNAGALTQSDDWAALI 194
GN AL++ W L+
Sbjct: 878 GNPKALSKQPLWNHLL 893
>gi|47087327|ref|NP_998639.1| regulator of nonsense transcripts 1 [Danio rerio]
gi|28278858|gb|AAH45353.1| Upf1 regulator of nonsense transcripts homolog (yeast) [Danio
rerio]
gi|240248221|emb|CAX18770.1| UPF1 regulator of nonsense transcripts homolog (yeast) [Danio
rerio]
Length = 1100
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 110/196 (56%), Gaps = 8/196 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + FPS FY+G L + + + L ++ P +FF V G+E
Sbjct: 678 LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRLKKGFDFQWPQPDKPMFFYVTQGQEEI 737
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
SY N EA E + L G +GIITPY+ Q L +F L
Sbjct: 738 ASSGTSYLNRTEAAN----VEKITTRLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSL 793
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+++ +++ I +VDAFQG+E+D II+SCVRA+ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 794 HTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIV 853
Query: 179 GNAGALTQSDDWAALI 194
GN AL++ W L+
Sbjct: 854 GNPKALSKQPLWNHLL 869
>gi|387017334|gb|AFJ50785.1| Regulator of nonsense transcripts 1-like [Crotalus adamanteus]
Length = 1131
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 111/196 (56%), Gaps = 8/196 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY-YKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + FPS FY+G L + + + + + ++ P +FF V G+E
Sbjct: 712 LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEI 771
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
SY N EA E + L G +GIITPY+ Q L +F L
Sbjct: 772 ASSGTSYLNRTEAAN----VEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSL 827
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+++ +++ I +VDAFQG+E+D II+SCVRA+ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 828 HTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIV 887
Query: 179 GNAGALTQSDDWAALI 194
GN AL++ W L+
Sbjct: 888 GNPKALSKQPLWNHLL 903
>gi|148223321|ref|NP_001085862.1| MGC80941 protein [Xenopus laevis]
gi|49116641|gb|AAH73441.1| MGC80941 protein [Xenopus laevis]
Length = 1098
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 111/196 (56%), Gaps = 8/196 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY-YKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + FPS FY+G L + + + + + ++ P +FF V G+E
Sbjct: 677 LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEI 736
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
SY N EA E + L G +GIITPY+ Q L +F L
Sbjct: 737 ASSGTSYLNRTEAAN----VEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSL 792
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+++ +++ I +VDAFQG+E+D II+SCVRA+ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 793 HTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIV 852
Query: 179 GNAGALTQSDDWAALI 194
GN AL++ W L+
Sbjct: 853 GNPKALSKQPLWNHLL 868
>gi|18859757|ref|NP_572767.1| Upf1 [Drosophila melanogaster]
gi|27923995|sp|Q9VYS3.2|RENT1_DROME RecName: Full=Regulator of nonsense transcripts 1 homolog
gi|16769416|gb|AAL28927.1| LD30316p [Drosophila melanogaster]
gi|22832121|gb|AAF48115.2| Upf1 [Drosophila melanogaster]
gi|220960128|gb|ACL92600.1| Upf1-PA [synthetic construct]
Length = 1180
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 74/206 (35%), Positives = 112/206 (54%), Gaps = 7/206 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESHR 62
L VQYRMHP + FPS FY+G L + + ++ + P +FF V G+E
Sbjct: 679 LEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRLKLDFPWPQPERPMFFLVTQGQEEIA 738
Query: 63 GGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVLN 120
G S+ N EA E + G+ +GIITPY+ Q L +++ L+
Sbjct: 739 GSGTSFLNRTEAAN----VEKITTRFLKAGIKPEQIGIITPYEGQRAYLVQYMQYQGSLH 794
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASN-HGVGFVADIRRMNVALTRARRALWVMG 179
S +++ I +VDAFQG+E+D+IIMSCVR++ G+GF+ D RR+NVALTRA+ + ++G
Sbjct: 795 SRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIGFLNDPRRLNVALTRAKFGIIIVG 854
Query: 180 NAGALTQSDDWAALIADSKARNCYMD 205
N L + W L+ K R ++
Sbjct: 855 NPKVLAKQQLWNHLLNFYKDRKVLVE 880
>gi|395847959|ref|XP_003796631.1| PREDICTED: regulator of nonsense transcripts 1 [Otolemur garnettii]
Length = 1118
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 111/196 (56%), Gaps = 8/196 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY-YKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + FPS FY+G L + + + + + ++ P +FF V G+E
Sbjct: 698 LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEI 757
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
SY N EA E + L G +GIITPY+ Q L +F L
Sbjct: 758 ASSGTSYLNRTEAAN----VEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSL 813
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+++ +++ I +VDAFQG+E+D II+SCVRA+ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 814 HTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIV 873
Query: 179 GNAGALTQSDDWAALI 194
GN AL++ W L+
Sbjct: 874 GNPKALSKQPLWNHLL 889
>gi|321463387|gb|EFX74403.1| hypothetical protein DAPPUDRAFT_57163 [Daphnia pulex]
Length = 1129
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 79/207 (38%), Positives = 116/207 (56%), Gaps = 30/207 (14%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLR----PY------VFF 52
L VQYRMHP + +FPS FY+G L + V +D +LR P+ +FF
Sbjct: 678 LEVQYRMHPRLSEFPSNFFYEGSLQNG---------VCAEDRILRGVDFPWPMPDRPMFF 728
Query: 53 DVIHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQ----L 108
V G+E G SY N EA E + G+ +GIITPY+ Q +
Sbjct: 729 YVTLGQEEIAGSGTSYLNRTEASN----VEKIATRFLRSGVKPEQIGIITPYEGQRAYLV 784
Query: 109 KCLQHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVA 167
+ +QH+ L+++ +D+ I +VDAFQG+E+D+IIMSCVR++ N G+GF+ D RR+NVA
Sbjct: 785 QYMQHQ--GSLHAKLYQDIEIASVDAFQGREKDLIIMSCVRSNENQGIGFLNDPRRLNVA 842
Query: 168 LTRARRALWVMGNAGALTQSDDWAALI 194
+TRAR + ++GN L + W L+
Sbjct: 843 MTRARYGIIIVGNPKVLAKQPVWNHLL 869
>gi|300708470|ref|XP_002996413.1| hypothetical protein NCER_100487 [Nosema ceranae BRL01]
gi|239605714|gb|EEQ82742.1| hypothetical protein NCER_100487 [Nosema ceranae BRL01]
Length = 683
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 111/194 (57%), Gaps = 16/194 (8%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
+LS+QYRMH + ++PS FY G L + ++YK + P+ FF +G+E
Sbjct: 496 ILSLQYRMHADLCEWPSETFYNGELQTG-------NRLFYKLNIGIPHNFFYACYGKEEV 548
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
S+ N EA + + HL K+ G+ + +G+ITPY+ Q H + S
Sbjct: 549 STSGTSFVNPMEALYCESIIRHLFKS----GITEKQIGVITPYEGQR---SHILNRIFGS 601
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVMGN 180
E G +L I+ VD FQG+E+D II+S VR++ + G+GFV D RRMNVALTRA+ L ++GN
Sbjct: 602 EPG-NLEISNVDGFQGREKDYIIVSLVRSNLYQGIGFVGDKRRMNVALTRAKHGLIIIGN 660
Query: 181 AGALTQSDDWAALI 194
+ + D W +L+
Sbjct: 661 PNTMIKHDAWKSLL 674
>gi|74201543|dbj|BAE28409.1| unnamed protein product [Mus musculus]
Length = 1124
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 77/207 (37%), Positives = 115/207 (55%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY-YKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + FPS FY+G L + + + + + ++ P +FF V G+E
Sbjct: 704 LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEI 763
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
SY N EA E + L G +GIITPY+ Q L +F L
Sbjct: 764 ASSGTSYLNRTEAAN----VEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSL 819
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
++ +++ I +VDAFQG+E+D II+SCVRA+ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 820 YTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIV 879
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN AL++ W L++ K + ++
Sbjct: 880 GNPKALSKQPLWNHLLSYYKEQKALVE 906
>gi|57640113|ref|YP_182591.1| UvrD/REP family DNA helicase [Thermococcus kodakarensis KOD1]
gi|57158437|dbj|BAD84367.1| DNA helicase, UvrD/REP family [Thermococcus kodakarensis KOD1]
Length = 661
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 128/222 (57%), Gaps = 28/222 (12%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINL---------PDEVYYKDPVLRP---Y 49
+L+VQYRM+ + +FPSR FY G++ ESV N+ P+ + D L+P
Sbjct: 448 MLTVQYRMNERLMEFPSREFYDGKIKAHESVKNITLADLGVSEPEFGNFWDEALKPENVL 507
Query: 50 VFFDVIHGR---ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKL 106
VF D E R GS S +N EAK + E ++K L+ MG+ +G+ITPY
Sbjct: 508 VFIDTSKREDRFERQRRGSDSRENPLEAKL---VTETVEKLLE-MGVKPDWIGVITPYDD 563
Query: 107 QLKCLQHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMN 165
Q R++++S G+D+ + TVD +QG+E+++I++S VR++ G +GF+ D+RR+N
Sbjct: 564 Q--------RDLISSMVGEDIEVKTVDGYQGREKEIIVLSFVRSNRRGELGFLTDLRRLN 615
Query: 166 VALTRARRALWVMGNAGALTQSDDWAALIADSKARNCYMDMD 207
V+LTRA+R L +G++ L+ + I + R ++++D
Sbjct: 616 VSLTRAKRKLIAVGDSSTLSNHPTYRRFIEFVRERGTFIEID 657
>gi|417413396|gb|JAA53027.1| Putative dna replication helicase, partial [Desmodus rotundus]
Length = 1052
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 111/196 (56%), Gaps = 8/196 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY-YKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + FPS FY+G L + + + + + ++ P +FF V G+E
Sbjct: 632 LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEI 691
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
SY N EA E + L G +GIITPY+ Q L +F L
Sbjct: 692 ASSGTSYLNRTEAAN----VEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSL 747
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+++ +++ I +VDAFQG+E+D II+SCVRA+ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 748 HTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIV 807
Query: 179 GNAGALTQSDDWAALI 194
GN AL++ W L+
Sbjct: 808 GNPKALSKQPLWNHLL 823
>gi|448531806|ref|XP_003870332.1| Nam7 protein [Candida orthopsilosis Co 90-125]
gi|380354686|emb|CCG24202.1| Nam7 protein [Candida orthopsilosis]
Length = 1014
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 101/313 (32%), Positives = 151/313 (48%), Gaps = 38/313 (12%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY----YKDPVLRPYVFFDVIHGR 58
L VQYRMHP + +FPS FY+G L D + D V + PV+ + F +GR
Sbjct: 663 LEVQYRMHPCLSEFPSNMFYEGSLQDG---VTNADRVVADSSFPWPVIDTPMMFWANYGR 719
Query: 59 ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFR-- 116
E SY N EA E + L G+ +G+ITPY+ Q L
Sbjct: 720 EELSSSGNSYLNRVEAMN----VERIITRLFKDGIKPEQIGVITPYEGQRAYLVQFMSMN 775
Query: 117 -NVLNS-EEGKDLYINTVDAFQGQERDVIIMSCVRASN-HGVGFVADIRRMNVALTRARR 173
+LN +E ++ I +VDAFQG+E+D II+SCVRA++ +GF++D RR+NVALTRA+
Sbjct: 776 STLLNKRDEYLEVEITSVDAFQGREKDFIILSCVRANDTQSIGFLSDPRRLNVALTRAKY 835
Query: 174 ALWVMGNAGALTQSDDWAALIADSKARNCYMD--MDSLPKEF----SVALAAKAPGYGPL 227
L V+GN AL+++ W L+ + + C +D +D+L + A + G
Sbjct: 836 GLLVLGNPRALSRNRLWNHLLVHFREKGCLVDGPLDNLQLSMVQLNNYTTANRNLKPGAT 895
Query: 228 QGKIPHNARGLRSAGQRHRSFDMNMESRSGTPSEDDEKVSRNGNYRPFKPPLEN----SL 283
K P++ G S +FD V GN P++ L+N +L
Sbjct: 896 NQKKPYHGLGAPSTNFSTTNFD------------SISNVGAGGNDVPYQSRLKNELWPAL 943
Query: 284 DDFDQSGEKYRDA 296
+ Q GE+ D+
Sbjct: 944 NQHSQDGEQNDDS 956
>gi|194223788|ref|XP_001915294.1| PREDICTED: regulator of nonsense transcripts 1 [Equus caballus]
Length = 1079
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 111/196 (56%), Gaps = 8/196 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY-YKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + FPS FY+G L + + + + + ++ P +FF V G+E
Sbjct: 659 LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEI 718
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
SY N EA E + L G +GIITPY+ Q L +F L
Sbjct: 719 ASSGTSYLNRTEAAN----VEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSL 774
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+++ +++ I +VDAFQG+E+D II+SCVRA+ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 775 HTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIV 834
Query: 179 GNAGALTQSDDWAALI 194
GN AL++ W L+
Sbjct: 835 GNPKALSKQPLWNHLL 850
>gi|194889307|ref|XP_001977057.1| GG18821 [Drosophila erecta]
gi|190648706|gb|EDV45984.1| GG18821 [Drosophila erecta]
Length = 1186
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 74/206 (35%), Positives = 112/206 (54%), Gaps = 7/206 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESHR 62
L VQYRMHP + FPS FY+G L + + ++ + P +FF V G+E
Sbjct: 679 LEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRLKLDFPWPQPERPMFFLVTQGQEEIA 738
Query: 63 GGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVLN 120
G S+ N EA E + G+ +GIITPY+ Q L +++ L+
Sbjct: 739 GSGTSFLNRTEAAN----VEKITTRFLKAGIKPEQIGIITPYEGQRAYLVQYMQYQGSLH 794
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASN-HGVGFVADIRRMNVALTRARRALWVMG 179
S +++ I +VDAFQG+E+D+IIMSCVR++ G+GF+ D RR+NVALTRA+ + ++G
Sbjct: 795 SRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIGFLNDPRRLNVALTRAKYGIIIVG 854
Query: 180 NAGALTQSDDWAALIADSKARNCYMD 205
N L + W L+ K R ++
Sbjct: 855 NPKVLAKQQLWNHLLNFYKDRKVLVE 880
>gi|149639074|ref|XP_001514946.1| PREDICTED: regulator of nonsense transcripts 1 [Ornithorhynchus
anatinus]
Length = 1113
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 111/196 (56%), Gaps = 8/196 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY-YKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + FPS FY+G L + + + + + ++ P +FF V G+E
Sbjct: 695 LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEI 754
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
SY N EA E + L G +GIITPY+ Q L +F L
Sbjct: 755 ASSGTSYLNRTEAAN----VEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSL 810
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+++ +++ I +VDAFQG+E+D II+SCVRA+ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 811 HTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIV 870
Query: 179 GNAGALTQSDDWAALI 194
GN AL++ W L+
Sbjct: 871 GNPKALSKQPLWNHLL 886
>gi|357122747|ref|XP_003563076.1| PREDICTED: regulator of nonsense transcripts 1 homolog
[Brachypodium distachyon]
Length = 1267
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 77/207 (37%), Positives = 114/207 (55%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDE-VYYKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + +FPS FY+G L + +V + + PV +FF V G E
Sbjct: 733 LQVQYRMHPCLSEFPSNCFYEGTLQNGVTVNERQSTGIDFPWPVPNRPMFFYVQMGVEEI 792
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLK-CLQHEFRN-VL 119
SY N EA E + T G+ +G+ITPY+ Q + + RN L
Sbjct: 793 SASGTSYLNRTEAAN----VEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGSL 848
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+ K++ + +VD+FQG+E+D II+SCVR++ H G+GF+ D RR+NVALTRAR + V+
Sbjct: 849 RQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVVL 908
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN L++ W +L+ K C ++
Sbjct: 909 GNPKVLSKQPLWNSLLTHYKEHECLVE 935
>gi|195043318|ref|XP_001991595.1| GH11976 [Drosophila grimshawi]
gi|193901353|gb|EDW00220.1| GH11976 [Drosophila grimshawi]
Length = 1276
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 74/206 (35%), Positives = 113/206 (54%), Gaps = 7/206 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESHR 62
L VQYRMHP + FPS FY+G L + + ++ + P +FF V G+E
Sbjct: 705 LEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRLKLDFPWPQPDRPMFFLVTQGQEEIA 764
Query: 63 GGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVLN 120
G S+ N EA E + G+ +GIITPY+ Q L +++ L+
Sbjct: 765 GSGTSFLNRTEAAN----VEKITTRFLKAGIKPEQIGIITPYEGQRAYLVQYMQYQGSLH 820
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASN-HGVGFVADIRRMNVALTRARRALWVMG 179
S +++ I +VDAFQG+E+D+IIMSCVR++ G+GF+ D RR+NVALTRA+ + ++G
Sbjct: 821 SRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIGFLNDPRRLNVALTRAKYGIIIVG 880
Query: 180 NAGALTQSDDWAALIADSKARNCYMD 205
N L++ W L+ K R ++
Sbjct: 881 NPKVLSKQQLWNHLLNFYKDRKVLVE 906
>gi|355767117|gb|EHH62580.1| hypothetical protein EGM_20966 [Macaca fascicularis]
Length = 1041
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 111/196 (56%), Gaps = 8/196 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY-YKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + FPS FY+G L + + + + + ++ P +FF V G+E
Sbjct: 621 LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEI 680
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
SY N EA E + L G +GIITPY+ Q L +F L
Sbjct: 681 ASSGTSYLNRTEAAN----VEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSL 736
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+++ +++ I +VDAFQG+E+D II+SCVRA+ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 737 HTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIV 796
Query: 179 GNAGALTQSDDWAALI 194
GN AL++ W L+
Sbjct: 797 GNPKALSKQPLWNHLL 812
>gi|355703337|gb|EHH29828.1| hypothetical protein EGK_10343, partial [Macaca mulatta]
Length = 1053
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 111/196 (56%), Gaps = 8/196 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY-YKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + FPS FY+G L + + + + + ++ P +FF V G+E
Sbjct: 633 LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEI 692
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
SY N EA E + L G +GIITPY+ Q L +F L
Sbjct: 693 ASSGTSYLNRTEAAN----VEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSL 748
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+++ +++ I +VDAFQG+E+D II+SCVRA+ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 749 HTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIV 808
Query: 179 GNAGALTQSDDWAALI 194
GN AL++ W L+
Sbjct: 809 GNPKALSKQPLWNHLL 824
>gi|334326682|ref|XP_003340788.1| PREDICTED: LOW QUALITY PROTEIN: regulator of nonsense transcripts
1-like [Monodelphis domestica]
Length = 1122
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 111/196 (56%), Gaps = 8/196 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY-YKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + FPS FY+G L + + + + + ++ P +FF V G+E
Sbjct: 702 LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEI 761
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
SY N EA E + L G +GIITPY+ Q L +F L
Sbjct: 762 ASSGTSYLNRTEAAN----VEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSL 817
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+++ +++ I +VDAFQG+E+D II+SCVRA+ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 818 HTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIV 877
Query: 179 GNAGALTQSDDWAALI 194
GN AL++ W L+
Sbjct: 878 GNPKALSKQPLWNHLL 893
>gi|380800401|gb|AFE72076.1| regulator of nonsense transcripts 1, partial [Macaca mulatta]
gi|380800403|gb|AFE72077.1| regulator of nonsense transcripts 1, partial [Macaca mulatta]
Length = 1064
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 111/196 (56%), Gaps = 8/196 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY-YKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + FPS FY+G L + + + + + ++ P +FF V G+E
Sbjct: 644 LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEI 703
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
SY N EA E + L G +GIITPY+ Q L +F L
Sbjct: 704 ASSGTSYLNRTEAAN----VEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSL 759
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+++ +++ I +VDAFQG+E+D II+SCVRA+ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 760 HTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIV 819
Query: 179 GNAGALTQSDDWAALI 194
GN AL++ W L+
Sbjct: 820 GNPKALSKQPLWNHLL 835
>gi|402904861|ref|XP_003915257.1| PREDICTED: regulator of nonsense transcripts 1, partial [Papio
anubis]
Length = 1041
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 111/196 (56%), Gaps = 8/196 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY-YKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + FPS FY+G L + + + + + ++ P +FF V G+E
Sbjct: 621 LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEI 680
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
SY N EA E + L G +GIITPY+ Q L +F L
Sbjct: 681 ASSGTSYLNRTEAAN----VEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSL 736
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+++ +++ I +VDAFQG+E+D II+SCVRA+ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 737 HTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIV 796
Query: 179 GNAGALTQSDDWAALI 194
GN AL++ W L+
Sbjct: 797 GNPKALSKQPLWNHLL 812
>gi|397493981|ref|XP_003817874.1| PREDICTED: regulator of nonsense transcripts 1 [Pan paniscus]
Length = 1053
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 111/196 (56%), Gaps = 8/196 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY-YKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + FPS FY+G L + + + + + ++ P +FF V G+E
Sbjct: 633 LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEI 692
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
SY N EA E + L G +GIITPY+ Q L +F L
Sbjct: 693 ASSGTSYLNRTEAAN----VEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSL 748
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+++ +++ I +VDAFQG+E+D II+SCVRA+ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 749 HTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIV 808
Query: 179 GNAGALTQSDDWAALI 194
GN AL++ W L+
Sbjct: 809 GNPKALSKQPLWNHLL 824
>gi|330918442|ref|XP_003298225.1| hypothetical protein PTT_08860 [Pyrenophora teres f. teres 0-1]
gi|311328707|gb|EFQ93678.1| hypothetical protein PTT_08860 [Pyrenophora teres f. teres 0-1]
Length = 1079
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/208 (36%), Positives = 118/208 (56%), Gaps = 10/208 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVL-RPYVFFDVIHGRES 60
L VQYRMHP + +FPS FY+G L + ++ + +V + PV+ P +F+ + E
Sbjct: 667 LQVQYRMHPCLSEFPSNMFYEGSLQNGVTMQERIRRDVDFPWPVVDSPMMFWSNLGAEEI 726
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV-- 118
G+ SY N EA+ E + G+ +GIITPY+ Q + +
Sbjct: 727 SASGT-SYLNRTEAQN----VEKIVTRFFKAGVQPGDIGIITPYEGQRSYVVSSMQATGS 781
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWV 177
E K++ + +VDAFQG+E+D II+SCVR++ H G+GF++D RR+NVALTRA+ L +
Sbjct: 782 FKKENYKEVEVASVDAFQGREKDFIILSCVRSNEHQGIGFLSDPRRLNVALTRAKYGLVI 841
Query: 178 MGNAGALTQSDDWAALIADSKARNCYMD 205
+GN L++ W L+ K RNC ++
Sbjct: 842 LGNPKVLSKHPLWHYLLLHFKERNCLVE 869
>gi|426199843|gb|EKV49767.1| hypothetical protein AGABI2DRAFT_190222 [Agaricus bisporus var.
bisporus H97]
Length = 463
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/207 (36%), Positives = 118/207 (57%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + +FPS FY+G L + + L V + PV +FF G+E
Sbjct: 52 LQVQYRMHPCLSEFPSNMFYEGTLQNGVTAPERLRKNVDFPWPVPDTPMFFYQNLGQEEI 111
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
S+ N EA + + + K KS G+ +GI+TPY+ Q + + +F L
Sbjct: 112 SSSGTSFLNRTEAS---NVEKIVTKFFKS-GVVPNQIGIVTPYEGQRSYIVNYMQFNGSL 167
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+ K++ + +VDAFQG+E+D II+SCVR++ H G+GF+ D RR+NVALTRA+ + ++
Sbjct: 168 KKDLYKEIEVASVDAFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAKYGVVIL 227
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN L++ W L+ K +NC ++
Sbjct: 228 GNPKVLSKHPLWHYLLTHYKEKNCLVE 254
>gi|297276540|ref|XP_002808229.1| PREDICTED: LOW QUALITY PROTEIN: regulator of nonsense transcripts
1-like [Macaca mulatta]
Length = 1096
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 111/196 (56%), Gaps = 8/196 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY-YKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + FPS FY+G L + + + + + ++ P +FF V G+E
Sbjct: 676 LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEI 735
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
SY N EA E + L G +GIITPY+ Q L +F L
Sbjct: 736 ASSGTSYLNRTEAAN----VEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSL 791
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+++ +++ I +VDAFQG+E+D II+SCVRA+ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 792 HTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIV 851
Query: 179 GNAGALTQSDDWAALI 194
GN AL++ W L+
Sbjct: 852 GNPKALSKQPLWNHLL 867
>gi|426387932|ref|XP_004060416.1| PREDICTED: regulator of nonsense transcripts 1 [Gorilla gorilla
gorilla]
Length = 1055
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 111/196 (56%), Gaps = 8/196 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY-YKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + FPS FY+G L + + + + + ++ P +FF V G+E
Sbjct: 635 LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEI 694
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
SY N EA E + L G +GIITPY+ Q L +F L
Sbjct: 695 ASSGTSYLNRTEAAN----VEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSL 750
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+++ +++ I +VDAFQG+E+D II+SCVRA+ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 751 HTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIV 810
Query: 179 GNAGALTQSDDWAALI 194
GN AL++ W L+
Sbjct: 811 GNPKALSKQPLWNHLL 826
>gi|410950946|ref|XP_003982163.1| PREDICTED: regulator of nonsense transcripts 1 [Felis catus]
Length = 1055
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 111/196 (56%), Gaps = 8/196 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY-YKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + FPS FY+G L + + + + + ++ P +FF V G+E
Sbjct: 635 LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEI 694
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
SY N EA E + L G +GIITPY+ Q L +F L
Sbjct: 695 ASSGTSYLNRTEAAN----VEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSL 750
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+++ +++ I +VDAFQG+E+D II+SCVRA+ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 751 HTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIV 810
Query: 179 GNAGALTQSDDWAALI 194
GN AL++ W L+
Sbjct: 811 GNPKALSKQPLWNHLL 826
>gi|363743891|ref|XP_418237.3| PREDICTED: regulator of nonsense transcripts 1 [Gallus gallus]
Length = 1096
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 111/196 (56%), Gaps = 8/196 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY-YKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + FPS FY+G L + + + + + ++ P +FF V G+E
Sbjct: 676 LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEI 735
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
SY N EA E + L G +GIITPY+ Q L +F L
Sbjct: 736 ASSGTSYLNRTEAAN----VEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSL 791
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+++ +++ I +VDAFQG+E+D II+SCVRA+ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 792 HTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIV 851
Query: 179 GNAGALTQSDDWAALI 194
GN AL++ W L+
Sbjct: 852 GNPKALSKQPLWNHLL 867
>gi|323507767|emb|CBQ67638.1| probable NAM7-nonsense-mediated mRNA decay protein [Sporisorium
reilianum SRZ2]
Length = 1094
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 76/208 (36%), Positives = 114/208 (54%), Gaps = 10/208 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLR-PYVFFDVIHGRES 60
L VQYRMHP + +FPS FY+G L + + L +V + PV P +FF + G+E
Sbjct: 706 LQVQYRMHPCLSEFPSNMFYEGTLQNGVTAPERLRKDVDFPWPVPSLPMLFFQNL-GQEE 764
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCL--QHEFRNV 118
S+ N EA E + G+ +GI+TPY+ Q + +
Sbjct: 765 ISSSGTSFLNRTEASN----VEKIVTRFFKAGVKPSQIGIVTPYEGQRSYIVNHMQLHGS 820
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWV 177
L E K++ + +VDAFQG+E+D II+SCVR++ H G+GF++D RR+NVALTRAR L +
Sbjct: 821 LKKELYKEVEVASVDAFQGREKDYIILSCVRSNEHQGIGFLSDPRRLNVALTRARYGLVI 880
Query: 178 MGNAGALTQSDDWAALIADSKARNCYMD 205
+GN L + W L+ K + C ++
Sbjct: 881 LGNPKVLNKHPLWHYLLVHYKEKGCLVE 908
>gi|393245688|gb|EJD53198.1| ATP dependent helicase [Auricularia delicata TFB-10046 SS5]
Length = 1072
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 76/207 (36%), Positives = 117/207 (56%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + +FPS FY+G L + + L V + P +FF G+E
Sbjct: 664 LQVQYRMHPCLSEFPSNMFYEGTLQNGVTAPERLRKNVDFPWPAPDTPMFFYQNLGQEEI 723
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
S+ N EA + + + K KS G+ +G+ITPY+ Q + + +F L
Sbjct: 724 SSSGTSFLNRTEA---ANVEKIVTKFFKS-GVVPSQIGVITPYEGQRSYIVNYMQFNGSL 779
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+ K++ + +VDAFQG+E+D II+SCVR++ H G+GF+ D RR+NVALTRA+ + ++
Sbjct: 780 KKDLYKEIEVASVDAFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAKYGVVIL 839
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN L++ W L+ K +NC +D
Sbjct: 840 GNPKVLSKHPLWHYLLTHYKEKNCLVD 866
>gi|346326262|gb|EGX95858.1| nonsense transcript regulator [Cordyceps militaris CM01]
Length = 1084
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 120/212 (56%), Gaps = 14/212 (6%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLR-PYVFFDVIHGR 58
+LL+ QYRMHP + +FPS FY G L + + + +V + PV P +F+ I
Sbjct: 672 ILLNTQYRMHPCLSEFPSNMFYDGSLQNGVTQEQRIRKDVDFPWPVAEMPMMFWSNIGNE 731
Query: 59 ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV 118
E G+ SY N EA E + G+ +G+ITPY+ Q + +N
Sbjct: 732 EISTSGT-SYLNRTEASN----VEKIVTRFFKAGVKPAEIGVITPYEGQRSYIVTTMQNS 786
Query: 119 LNSEEGKDLY----INTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARR 173
S+ KDLY + +VDAFQG+E+D I++SCVR++ N G+GF++D RR+NVALTRA+
Sbjct: 787 GTSK--KDLYKGVEVASVDAFQGREKDFIVLSCVRSNENQGIGFLSDPRRLNVALTRAKY 844
Query: 174 ALWVMGNAGALTQSDDWAALIADSKARNCYMD 205
L ++GN L++ + W L+ + R C+++
Sbjct: 845 GLVILGNPRVLSKHELWYNLLTHFRDRRCFVE 876
>gi|326934529|ref|XP_003213341.1| PREDICTED: regulator of nonsense transcripts 1-like [Meleagris
gallopavo]
Length = 1059
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 111/196 (56%), Gaps = 8/196 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY-YKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + FPS FY+G L + + + + + ++ P +FF V G+E
Sbjct: 639 LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEI 698
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
SY N EA E + L G +GIITPY+ Q L +F L
Sbjct: 699 ASSGTSYLNRTEAAN----VEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSL 754
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+++ +++ I +VDAFQG+E+D II+SCVRA+ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 755 HTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIV 814
Query: 179 GNAGALTQSDDWAALI 194
GN AL++ W L+
Sbjct: 815 GNPKALSKQPLWNHLL 830
>gi|195131883|ref|XP_002010374.1| GI14718 [Drosophila mojavensis]
gi|193908824|gb|EDW07691.1| GI14718 [Drosophila mojavensis]
Length = 1187
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 74/206 (35%), Positives = 112/206 (54%), Gaps = 7/206 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESHR 62
L VQYRMHP + FPS FY+G L + + ++ + P +FF V G+E
Sbjct: 686 LEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRLKLDFPWPQPERPMFFLVTQGQEEIA 745
Query: 63 GGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVLN 120
G S+ N EA E + G+ +GIITPY+ Q L +++ L+
Sbjct: 746 GSGTSFLNRTEAAN----VEKITTRFLKAGIKPEQIGIITPYEGQRAYLVQYMQYQGSLH 801
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASN-HGVGFVADIRRMNVALTRARRALWVMG 179
S +++ I +VDAFQG+E+D+IIMSCVR++ G+GF+ D RR+NVALTRA+ + ++G
Sbjct: 802 SRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIGFLNDPRRLNVALTRAKYGIIIVG 861
Query: 180 NAGALTQSDDWAALIADSKARNCYMD 205
N L + W L+ K R ++
Sbjct: 862 NPKVLAKQQLWNHLLNFYKDRKVLVE 887
>gi|322789964|gb|EFZ15058.1| hypothetical protein SINV_12997 [Solenopsis invicta]
Length = 966
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 117/211 (55%), Gaps = 16/211 (7%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRL-----TDSESVINLPDEVYYKDPVLRPYVFFDVIHG 57
L VQYRMHP + FPS FY+G L D ++ ++ + P +FF V G
Sbjct: 527 LEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLL----KIDFPWPAPDKPMFFYVTQG 582
Query: 58 RESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EF 115
+E G SY N EA E + G+ +G+ITPY+ Q L ++
Sbjct: 583 QEEIAGSGTSYLNRTEASN----VEKITTRFLRCGVKPEQIGVITPYEGQRAYLVQYMQY 638
Query: 116 RNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRA 174
+ L+S+ +++ + +VDAFQG+E+D+IIMSCVR++ H G+GF+ D RR+NVALTRA+
Sbjct: 639 QGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRLNVALTRAKYG 698
Query: 175 LWVMGNAGALTQSDDWAALIADSKARNCYMD 205
+ ++GN L++ W L++ K + ++
Sbjct: 699 IIIVGNPKVLSKQPLWNHLLSFYKEQKVLVE 729
>gi|395513182|ref|XP_003760808.1| PREDICTED: regulator of nonsense transcripts 1 [Sarcophilus
harrisii]
Length = 1050
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 111/196 (56%), Gaps = 8/196 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY-YKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + FPS FY+G L + + + + + ++ P +FF V G+E
Sbjct: 630 LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEI 689
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
SY N EA E + L G +GIITPY+ Q L +F L
Sbjct: 690 ASSGTSYLNRTEAAN----VEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSL 745
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+++ +++ I +VDAFQG+E+D II+SCVRA+ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 746 HTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIV 805
Query: 179 GNAGALTQSDDWAALI 194
GN AL++ W L+
Sbjct: 806 GNPKALSKQPLWNHLL 821
>gi|383847285|ref|XP_003699285.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 1
[Megachile rotundata]
Length = 1119
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 117/211 (55%), Gaps = 16/211 (7%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRL-----TDSESVINLPDEVYYKDPVLRPYVFFDVIHG 57
L VQYRMHP + FPS FY+G L D ++ ++ + P +FF V G
Sbjct: 682 LEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLL----KIDFPWPAPDKPMFFYVTQG 737
Query: 58 RESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EF 115
+E G SY N EA E + G+ +G+ITPY+ Q L ++
Sbjct: 738 QEEIAGSGTSYLNRTEASN----VEKIATRFLRCGVKPEQIGVITPYEGQRAYLVQYMQY 793
Query: 116 RNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRA 174
+ L+S+ +++ + +VDAFQG+E+D+IIMSCVR++ H G+GF+ D RR+NVALTRA+
Sbjct: 794 QGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRLNVALTRAKYG 853
Query: 175 LWVMGNAGALTQSDDWAALIADSKARNCYMD 205
+ ++GN L++ W L++ K + ++
Sbjct: 854 IIIVGNPKVLSKQPLWNHLLSFYKEQKVLVE 884
>gi|432854578|ref|XP_004067970.1| PREDICTED: LOW QUALITY PROTEIN: regulator of nonsense transcripts
1-like [Oryzias latipes]
Length = 1093
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 76/207 (36%), Positives = 115/207 (55%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY-YKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + FPS FY+G L + + + + + ++ P +FF V G+E
Sbjct: 671 LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRIKKGFDFQWPQPDKPMFFYVTQGQEEI 730
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
SY N EA E + L G +GIITPY+ Q L +F L
Sbjct: 731 ASSGTSYLNRTEAAN----VEKITTRLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSL 786
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+++ + + I +VDAFQG+E+D II+SCVRA+ H G+GF+ D RR+NVALTRA+ + ++
Sbjct: 787 HTKLYQQVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAKYGVIIV 846
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN AL++ W L+ + K + ++
Sbjct: 847 GNPKALSKQPLWNNLLNNYKEQKVLVE 873
>gi|410053595|ref|XP_512972.4| PREDICTED: regulator of nonsense transcripts 1 [Pan troglodytes]
Length = 1057
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 111/196 (56%), Gaps = 8/196 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY-YKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + FPS FY+G L + + + + + ++ P +FF V G+E
Sbjct: 698 LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEI 757
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
SY N EA E + L G +GIITPY+ Q L +F L
Sbjct: 758 ASSGTSYLNRTEAAN----VEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSL 813
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+++ +++ I +VDAFQG+E+D II+SCVRA+ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 814 HTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIV 873
Query: 179 GNAGALTQSDDWAALI 194
GN AL++ W L+
Sbjct: 874 GNPKALSKQPLWNHLL 889
>gi|431922030|gb|ELK19203.1| Regulator of nonsense transcripts 1 [Pteropus alecto]
Length = 1087
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 110/196 (56%), Gaps = 8/196 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY-YKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + FPS FY+G L + + + + ++ P +FF V G+E
Sbjct: 667 LQVQYRMHPALSAFPSNIFYEGSLQNGVTAAERVKKGFDFQWPQPDKPMFFYVTQGQEEI 726
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
SY N EA E + L G +GIITPY+ Q L +F L
Sbjct: 727 ASSGTSYLNRTEAAN----VEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSL 782
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+++ +++ I +VDAFQG+E+D II+SCVRA+ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 783 HTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIV 842
Query: 179 GNAGALTQSDDWAALI 194
GN AL++ W L+
Sbjct: 843 GNPKALSKQPLWNHLL 858
>gi|340721321|ref|XP_003399071.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 1
[Bombus terrestris]
Length = 1119
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 117/211 (55%), Gaps = 16/211 (7%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRL-----TDSESVINLPDEVYYKDPVLRPYVFFDVIHG 57
L VQYRMHP + FPS FY+G L D ++ ++ + P +FF V G
Sbjct: 682 LEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLL----KIDFPWPAPDKPMFFYVTQG 737
Query: 58 RESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EF 115
+E G SY N EA E + G+ +G+ITPY+ Q L ++
Sbjct: 738 QEEIAGSGTSYLNRTEASN----VEKIATRFLRCGVKPEQIGVITPYEGQRAYLVQYMQY 793
Query: 116 RNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRA 174
+ L+S+ +++ + +VDAFQG+E+D+IIMSCVR++ H G+GF+ D RR+NVALTRA+
Sbjct: 794 QGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRLNVALTRAKYG 853
Query: 175 LWVMGNAGALTQSDDWAALIADSKARNCYMD 205
+ ++GN L++ W L++ K + ++
Sbjct: 854 IIIVGNPKVLSKQPLWNHLLSFYKEQKVLVE 884
>gi|66553048|ref|XP_393330.2| PREDICTED: regulator of nonsense transcripts 1 [Apis mellifera]
gi|380015761|ref|XP_003691864.1| PREDICTED: regulator of nonsense transcripts 1-like [Apis florea]
Length = 1119
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 117/211 (55%), Gaps = 16/211 (7%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRL-----TDSESVINLPDEVYYKDPVLRPYVFFDVIHG 57
L VQYRMHP + FPS FY+G L D ++ ++ + P +FF V G
Sbjct: 682 LEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLL----KIDFPWPAPDKPMFFYVTQG 737
Query: 58 RESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EF 115
+E G SY N EA E + G+ +G+ITPY+ Q L ++
Sbjct: 738 QEEIAGSGTSYLNRTEASN----VEKIATRFLRCGVKPEQIGVITPYEGQRAYLVQYMQY 793
Query: 116 RNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRA 174
+ L+S+ +++ + +VDAFQG+E+D+IIMSCVR++ H G+GF+ D RR+NVALTRA+
Sbjct: 794 QGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRLNVALTRAKYG 853
Query: 175 LWVMGNAGALTQSDDWAALIADSKARNCYMD 205
+ ++GN L++ W L++ K + ++
Sbjct: 854 IIIVGNPKVLSKQPLWNHLLSFYKEQKVLVE 884
>gi|350406734|ref|XP_003487865.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 1
[Bombus impatiens]
Length = 1119
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 117/211 (55%), Gaps = 16/211 (7%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRL-----TDSESVINLPDEVYYKDPVLRPYVFFDVIHG 57
L VQYRMHP + FPS FY+G L D ++ ++ + P +FF V G
Sbjct: 682 LEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLL----KIDFPWPAPDKPMFFYVTQG 737
Query: 58 RESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EF 115
+E G SY N EA E + G+ +G+ITPY+ Q L ++
Sbjct: 738 QEEIAGSGTSYLNRTEASN----VEKIATRFLRCGVKPEQIGVITPYEGQRAYLVQYMQY 793
Query: 116 RNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRA 174
+ L+S+ +++ + +VDAFQG+E+D+IIMSCVR++ H G+GF+ D RR+NVALTRA+
Sbjct: 794 QGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRLNVALTRAKYG 853
Query: 175 LWVMGNAGALTQSDDWAALIADSKARNCYMD 205
+ ++GN L++ W L++ K + ++
Sbjct: 854 IIIVGNPKVLSKQPLWNHLLSFYKEQKVLVE 884
>gi|345491348|ref|XP_003426578.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 3
[Nasonia vitripennis]
Length = 1121
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 117/211 (55%), Gaps = 16/211 (7%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRL-----TDSESVINLPDEVYYKDPVLRPYVFFDVIHG 57
L VQYRMHP + FPS FY+G L D ++ ++ + P +FF V G
Sbjct: 683 LEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLL----KIDFPWPAPDKPMFFYVTQG 738
Query: 58 RESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EF 115
+E G SY N EA E + G+ +G+ITPY+ Q L ++
Sbjct: 739 QEEIAGSGTSYLNRTEASN----VEKITTRFLRCGVKPEQIGVITPYEGQRAYLVQYMQY 794
Query: 116 RNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRA 174
+ L+S+ +++ + +VDAFQG+E+D+IIMSCVR++ H G+GF+ D RR+NVALTRA+
Sbjct: 795 QGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRLNVALTRAKYG 854
Query: 175 LWVMGNAGALTQSDDWAALIADSKARNCYMD 205
+ ++GN L++ W L++ K + ++
Sbjct: 855 IIIVGNPKVLSKQPLWNHLLSFYKEQKVLVE 885
>gi|348523131|ref|XP_003449077.1| PREDICTED: regulator of nonsense transcripts 1-like [Oreochromis
niloticus]
Length = 1101
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 76/207 (36%), Positives = 115/207 (55%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY-YKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + FPS FY+G L + + + + + ++ P +FF V G+E
Sbjct: 680 LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRIKKGFDFQWPQPDKPMFFYVTQGQEEI 739
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
SY N EA E + L G +GIITPY+ Q L +F L
Sbjct: 740 ASSGTSYLNRTEAAN----VEKITTRLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSL 795
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+++ + + I +VDAFQG+E+D II+SCVRA+ H G+GF+ D RR+NVALTRA+ + ++
Sbjct: 796 HTKLYQQVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAKYGVIIV 855
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN AL++ W L+ + K + ++
Sbjct: 856 GNPKALSKQPLWNNLLNNYKEQKVLVE 882
>gi|348500490|ref|XP_003437806.1| PREDICTED: regulator of nonsense transcripts 1-like [Oreochromis
niloticus]
Length = 1109
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 111/196 (56%), Gaps = 8/196 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY-YKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + FPS FY+G L + + + + + ++ P +FF V G+E
Sbjct: 677 LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEI 736
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
SY N EA E + L G +GIITPY+ Q L +F L
Sbjct: 737 ASSGTSYLNRTEAAN----VEKITTRLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSL 792
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+++ +++ I +VDAFQG+E+D II+SCVRA+ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 793 HTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIV 852
Query: 179 GNAGALTQSDDWAALI 194
GN AL++ W L+
Sbjct: 853 GNPKALSKQPLWNHLL 868
>gi|195396575|ref|XP_002056906.1| GJ16782 [Drosophila virilis]
gi|194146673|gb|EDW62392.1| GJ16782 [Drosophila virilis]
Length = 1219
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 74/206 (35%), Positives = 112/206 (54%), Gaps = 7/206 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESHR 62
L VQYRMHP + FPS FY+G L + + ++ + P +FF V G+E
Sbjct: 689 LEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRLKLDFPWPQPERPMFFLVTQGQEEIA 748
Query: 63 GGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVLN 120
G S+ N EA E + G+ +GIITPY+ Q L +++ L+
Sbjct: 749 GSGTSFLNRTEAAN----VEKITTRFLKAGIKPEQIGIITPYEGQRAYLVQYMQYQGSLH 804
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASN-HGVGFVADIRRMNVALTRARRALWVMG 179
S +++ I +VDAFQG+E+D+IIMSCVR++ G+GF+ D RR+NVALTRA+ + ++G
Sbjct: 805 SRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIGFLNDPRRLNVALTRAKYGIIIVG 864
Query: 180 NAGALTQSDDWAALIADSKARNCYMD 205
N L + W L+ K R ++
Sbjct: 865 NPKVLAKQQLWNHLLNFYKDRKVLVE 890
>gi|410924489|ref|XP_003975714.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 1
[Takifugu rubripes]
Length = 1111
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 111/196 (56%), Gaps = 8/196 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY-YKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + FPS FY+G L + + + + + ++ P +FF V G+E
Sbjct: 675 LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEI 734
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
SY N EA E + L G +GIITPY+ Q L +F L
Sbjct: 735 ASSGTSYLNRTEAAN----VEKITTRLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSL 790
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+++ +++ I +VDAFQG+E+D II+SCVRA+ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 791 HTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIV 850
Query: 179 GNAGALTQSDDWAALI 194
GN AL++ W L+
Sbjct: 851 GNPKALSKQPLWNHLL 866
>gi|358388726|gb|EHK26319.1| hypothetical protein TRIVIDRAFT_218486 [Trichoderma virens Gv29-8]
Length = 1083
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 77/211 (36%), Positives = 119/211 (56%), Gaps = 16/211 (7%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSES-VINLPDEVYYKDPVLR-PYVFFDVIHGRES 60
L QYRMHP + +FPS FY G L + + + +V + PV P +F+ I G E
Sbjct: 675 LKTQYRMHPCLSEFPSNMFYDGTLQNGITHEQRVRKDVDFPWPVTEMPMMFWSNI-GHEE 733
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSM---GLGKVTVGIITPYKLQLKCLQHEFRN 117
SY N EA +++KT+ G+ +G+ITPY+ Q + +N
Sbjct: 734 ISTSGTSYLNRTEAS-------NVEKTVTRFFKAGVKPSEIGVITPYEGQRSYIVSTMQN 786
Query: 118 --VLNSEEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRA 174
E KD+ + +VDAFQG+E+D I++SCVR++ N G+GF++D RR+NVALTRA+
Sbjct: 787 SGTYKKELYKDVEVASVDAFQGREKDFIVLSCVRSNDNQGIGFLSDPRRLNVALTRAKYG 846
Query: 175 LWVMGNAGALTQSDDWAALIADSKARNCYMD 205
L ++GN L++ + W L+A K R C+++
Sbjct: 847 LVILGNPKVLSKHELWHNLLAHFKDRKCFVE 877
>gi|111219431|ref|XP_646847.2| DNA2/NAM7 helicase family protein [Dictyostelium discoideum AX4]
gi|90970906|gb|EAL72919.2| DNA2/NAM7 helicase family protein [Dictyostelium discoideum AX4]
Length = 2314
Score = 124 bits (311), Expect = 8e-26, Method: Composition-based stats.
Identities = 79/212 (37%), Positives = 113/212 (53%), Gaps = 17/212 (8%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINL--PDEVYYKDPVLRPYVFFDVIHGRE 59
+L+ QYRMHP I FPS FY+ RL D ++V +L ++ D P F+DVI +E
Sbjct: 1598 MLNTQYRMHPTISRFPSNQFYKDRLLDGDNVKSLVYNQHNFHSDIKYGPIRFYDVIDSKE 1657
Query: 60 SHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQ---LKCLQHEFR 116
G S +N E L + L + K + GIITPYKLQ +K +F
Sbjct: 1658 --ESGKRSLKNKLEITMVFTLIKKLVQDYPE--CKKFSFGIITPYKLQKSEIKEQHKQFN 1713
Query: 117 NVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALW 176
LN E +T+D QG E+D+II+SCVR+ +GF++D RR+NVALTRA+ L+
Sbjct: 1714 YPLNIE------TSTIDGVQGSEKDIIILSCVRSER--IGFLSDRRRINVALTRAKFGLF 1765
Query: 177 VMGNAGALTQSDDWAALIADSKARNCYMDMDS 208
V+GN+ L + W + N + +DS
Sbjct: 1766 VIGNSKLLKKDRTWGPFCQYVHSINSMVSIDS 1797
>gi|66826987|ref|XP_646848.1| DNA2/NAM7 helicase family protein [Dictyostelium discoideum AX4]
gi|60474984|gb|EAL72920.1| DNA2/NAM7 helicase family protein [Dictyostelium discoideum AX4]
Length = 2523
Score = 124 bits (311), Expect = 8e-26, Method: Composition-based stats.
Identities = 79/212 (37%), Positives = 113/212 (53%), Gaps = 17/212 (8%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINL--PDEVYYKDPVLRPYVFFDVIHGRE 59
+L+ QYRMHP I FPS FY+ RL D ++V +L ++ D P F+DVI +E
Sbjct: 1797 MLNTQYRMHPTISRFPSNQFYKDRLLDGDNVKSLVYNQHNFHSDIKYGPIRFYDVIDSKE 1856
Query: 60 SHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQ---LKCLQHEFR 116
G S +N E L + L + K + GIITPYKLQ +K +F
Sbjct: 1857 --ESGKRSLKNKLEITMVFTLIKKLVQDYPE--CKKFSFGIITPYKLQKSEIKEQHKQFN 1912
Query: 117 NVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALW 176
LN E +T+D QG E+D+II+SCVR+ +GF++D RR+NVALTRA+ L+
Sbjct: 1913 YPLNIE------TSTIDGVQGSEKDIIILSCVRSER--IGFLSDRRRINVALTRAKFGLF 1964
Query: 177 VMGNAGALTQSDDWAALIADSKARNCYMDMDS 208
V+GN+ L + W + N + +DS
Sbjct: 1965 VIGNSKLLKKDRTWGPFCQYVHSINSMVSIDS 1996
>gi|340721323|ref|XP_003399072.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 2
[Bombus terrestris]
Length = 1108
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 117/211 (55%), Gaps = 16/211 (7%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRL-----TDSESVINLPDEVYYKDPVLRPYVFFDVIHG 57
L VQYRMHP + FPS FY+G L D ++ ++ + P +FF V G
Sbjct: 671 LEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLL----KIDFPWPAPDKPMFFYVTQG 726
Query: 58 RESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EF 115
+E G SY N EA E + G+ +G+ITPY+ Q L ++
Sbjct: 727 QEEIAGSGTSYLNRTEASN----VEKIATRFLRCGVKPEQIGVITPYEGQRAYLVQYMQY 782
Query: 116 RNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRA 174
+ L+S+ +++ + +VDAFQG+E+D+IIMSCVR++ H G+GF+ D RR+NVALTRA+
Sbjct: 783 QGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRLNVALTRAKYG 842
Query: 175 LWVMGNAGALTQSDDWAALIADSKARNCYMD 205
+ ++GN L++ W L++ K + ++
Sbjct: 843 IIIVGNPKVLSKQPLWNHLLSFYKEQKVLVE 873
>gi|160331663|ref|XP_001712538.1| sen1 [Hemiselmis andersenii]
gi|159765987|gb|ABW98213.1| sen1 [Hemiselmis andersenii]
Length = 738
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 73/201 (36%), Positives = 113/201 (56%), Gaps = 9/201 (4%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES- 60
L Q+RMHP I F SR FY+ L DS+ V + + + + P +FFD G ++
Sbjct: 494 FLETQFRMHPQISSFVSRKFYKNGLNDSQMVKKVQNFHFLR--CFGPILFFDASEGLDNF 551
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
H+ S+ N++E + ++ L ++ L ++GII+ Y+ Q+ +Q N+L
Sbjct: 552 HKKQKNSWCNLEEIRIISFIFRSLICLFTNLNLR--SIGIISSYQGQVSEIQEN--NILK 607
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVMG 179
E K INTVD FQG+E+++II S VRA N G+GF++D RRMNVA TRA+ + W +G
Sbjct: 608 RSELKG-QINTVDGFQGREKNIIIFSTVRARNERGIGFLSDCRRMNVAFTRAKFSFWGVG 666
Query: 180 NAGALTQSDDWAALIADSKAR 200
A L + +W + D + R
Sbjct: 667 KASVLKKDTNWFEGLFDFRKR 687
>gi|384486429|gb|EIE78609.1| hypothetical protein RO3G_03313 [Rhizopus delemar RA 99-880]
Length = 1038
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 114/207 (55%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + +FPS FY+G L + + + ++ + PVL + F G E
Sbjct: 669 LQVQYRMHPCLSEFPSNMFYEGTLQNGITTQERIRKDIDFPWPVLETPMMFYANLGNEEI 728
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
SY N EA + K+ G+ +G++TPY+ Q + +F L
Sbjct: 729 STSGTSYLNRTEASNCEKIVTRFMKS----GVMPSQIGVVTPYEGQRSYIVQYMQFNGSL 784
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+ K++ + +VDAFQG+E+D II+SCVR++ H G+GF++D RR+NVALTRA+ + ++
Sbjct: 785 RKDLYKEIEVASVDAFQGREKDYIILSCVRSNEHQGIGFLSDPRRLNVALTRAKYGVVIL 844
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN L++ W L+ K + C +D
Sbjct: 845 GNPKILSRHPLWHHLLVHYKEKGCLVD 871
>gi|383847287|ref|XP_003699286.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 2
[Megachile rotundata]
Length = 1106
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 117/211 (55%), Gaps = 16/211 (7%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRL-----TDSESVINLPDEVYYKDPVLRPYVFFDVIHG 57
L VQYRMHP + FPS FY+G L D ++ ++ + P +FF V G
Sbjct: 669 LEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLL----KIDFPWPAPDKPMFFYVTQG 724
Query: 58 RESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EF 115
+E G SY N EA E + G+ +G+ITPY+ Q L ++
Sbjct: 725 QEEIAGSGTSYLNRTEASN----VEKIATRFLRCGVKPEQIGVITPYEGQRAYLVQYMQY 780
Query: 116 RNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRA 174
+ L+S+ +++ + +VDAFQG+E+D+IIMSCVR++ H G+GF+ D RR+NVALTRA+
Sbjct: 781 QGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRLNVALTRAKYG 840
Query: 175 LWVMGNAGALTQSDDWAALIADSKARNCYMD 205
+ ++GN L++ W L++ K + ++
Sbjct: 841 IIIVGNPKVLSKQPLWNHLLSFYKEQKVLVE 871
>gi|85101908|ref|XP_961233.1| ATP-dependent helicase NAM7 [Neurospora crassa OR74A]
gi|18202963|sp|Q9HEH1.1|RENT1_NEUCR RecName: Full=Regulator of nonsense transcripts 1 homolog
gi|11595520|emb|CAC18314.1| probable nonsense-mediated mRNA decay protein [Neurospora crassa]
gi|28922775|gb|EAA31997.1| ATP-dependent helicase NAM7 [Neurospora crassa OR74A]
Length = 1093
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 112/207 (54%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + +FPS FY+G L + + L +V + PV + F G E
Sbjct: 683 LKVQYRMHPCLSEFPSNMFYEGSLQNGVTAAERLRKDVDFPWPVPETPMMFWSNLGNEEI 742
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV--L 119
SY N EA E + G+ +G+ITPY+ Q + + +N
Sbjct: 743 SASGTSYLNRTEAAN----VEKIVTRFFKAGVKPADIGVITPYEGQRSYIVNTMQNTGTF 798
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRALWVM 178
E +++ + +VDAFQG+E+D I++SCVR++ N G+GF++D RR+NVALTRA+ L ++
Sbjct: 799 KKESYREVEVASVDAFQGREKDFIVLSCVRSNENQGIGFLSDPRRLNVALTRAKYGLVII 858
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN L + + W L+ K + C ++
Sbjct: 859 GNPKVLCKHELWHHLLVHFKDKKCLVE 885
>gi|350406741|ref|XP_003487867.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 3
[Bombus impatiens]
Length = 1108
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 117/211 (55%), Gaps = 16/211 (7%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRL-----TDSESVINLPDEVYYKDPVLRPYVFFDVIHG 57
L VQYRMHP + FPS FY+G L D ++ ++ + P +FF V G
Sbjct: 671 LEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLL----KIDFPWPAPDKPMFFYVTQG 726
Query: 58 RESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EF 115
+E G SY N EA E + G+ +G+ITPY+ Q L ++
Sbjct: 727 QEEIAGSGTSYLNRTEASN----VEKIATRFLRCGVKPEQIGVITPYEGQRAYLVQYMQY 782
Query: 116 RNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRA 174
+ L+S+ +++ + +VDAFQG+E+D+IIMSCVR++ H G+GF+ D RR+NVALTRA+
Sbjct: 783 QGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRLNVALTRAKYG 842
Query: 175 LWVMGNAGALTQSDDWAALIADSKARNCYMD 205
+ ++GN L++ W L++ K + ++
Sbjct: 843 IIIVGNPKVLSKQPLWNHLLSFYKEQKVLVE 873
>gi|449303317|gb|EMC99325.1| hypothetical protein BAUCODRAFT_399389 [Baudoinia compniacensis
UAMH 10762]
Length = 1096
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 112/207 (54%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + +FPS FY+G L + ++ L V + PV + F G E
Sbjct: 662 LQVQYRMHPCLSEFPSNMFYEGSLQNGITMQERLLRNVDFPWPVADAPMMFWSNLGNEEI 721
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV--L 119
SY N EA E + G+ ++GIITPY+ Q + +
Sbjct: 722 SASGTSYLNRTEASN----VEKIVTRFFKAGVKPESIGIITPYEGQRSYVVQSMQQTGTF 777
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
E K++ + +VDAFQG+E+D I++SCVR+++H G+GF++D RR+NVALTRA+ L ++
Sbjct: 778 RKEIYKEVEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLVIL 837
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN L + W L+ K RNC ++
Sbjct: 838 GNPKVLAKHPLWHYLLLHFKERNCLVE 864
>gi|410924491|ref|XP_003975715.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 2
[Takifugu rubripes]
Length = 1122
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 111/196 (56%), Gaps = 8/196 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY-YKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + FPS FY+G L + + + + + ++ P +FF V G+E
Sbjct: 686 LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEI 745
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
SY N EA E + L G +GIITPY+ Q L +F L
Sbjct: 746 ASSGTSYLNRTEAAN----VEKITTRLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSL 801
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+++ +++ I +VDAFQG+E+D II+SCVRA+ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 802 HTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIV 861
Query: 179 GNAGALTQSDDWAALI 194
GN AL++ W L+
Sbjct: 862 GNPKALSKQPLWNHLL 877
>gi|350406738|ref|XP_003487866.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 2
[Bombus impatiens]
Length = 1106
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 117/211 (55%), Gaps = 16/211 (7%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRL-----TDSESVINLPDEVYYKDPVLRPYVFFDVIHG 57
L VQYRMHP + FPS FY+G L D ++ ++ + P +FF V G
Sbjct: 669 LEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLL----KIDFPWPAPDKPMFFYVTQG 724
Query: 58 RESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EF 115
+E G SY N EA E + G+ +G+ITPY+ Q L ++
Sbjct: 725 QEEIAGSGTSYLNRTEASN----VEKIATRFLRCGVKPEQIGVITPYEGQRAYLVQYMQY 780
Query: 116 RNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRA 174
+ L+S+ +++ + +VDAFQG+E+D+IIMSCVR++ H G+GF+ D RR+NVALTRA+
Sbjct: 781 QGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRLNVALTRAKYG 840
Query: 175 LWVMGNAGALTQSDDWAALIADSKARNCYMD 205
+ ++GN L++ W L++ K + ++
Sbjct: 841 IIIVGNPKVLSKQPLWNHLLSFYKEQKVLVE 871
>gi|340721325|ref|XP_003399073.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 3
[Bombus terrestris]
Length = 1106
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 117/211 (55%), Gaps = 16/211 (7%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRL-----TDSESVINLPDEVYYKDPVLRPYVFFDVIHG 57
L VQYRMHP + FPS FY+G L D ++ ++ + P +FF V G
Sbjct: 669 LEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLL----KIDFPWPAPDKPMFFYVTQG 724
Query: 58 RESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EF 115
+E G SY N EA E + G+ +G+ITPY+ Q L ++
Sbjct: 725 QEEIAGSGTSYLNRTEASN----VEKIATRFLRCGVKPEQIGVITPYEGQRAYLVQYMQY 780
Query: 116 RNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRA 174
+ L+S+ +++ + +VDAFQG+E+D+IIMSCVR++ H G+GF+ D RR+NVALTRA+
Sbjct: 781 QGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRLNVALTRAKYG 840
Query: 175 LWVMGNAGALTQSDDWAALIADSKARNCYMD 205
+ ++GN L++ W L++ K + ++
Sbjct: 841 IIIVGNPKVLSKQPLWNHLLSFYKEQKVLVE 871
>gi|444726614|gb|ELW67138.1| Regulator of nonsense transcripts 1 [Tupaia chinensis]
Length = 1000
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 111/196 (56%), Gaps = 8/196 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY-YKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + FPS FY+G L + + + + + ++ P +FF V G+E
Sbjct: 656 LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEI 715
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
SY N EA E + L G +GIITPY+ Q L +F L
Sbjct: 716 ASSGTSYLNRTEAAN----VEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSL 771
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+++ +++ I +VDAFQG+E+D II+SCVRA+ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 772 HTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIV 831
Query: 179 GNAGALTQSDDWAALI 194
GN AL++ W L+
Sbjct: 832 GNPKALSKQPLWNHLL 847
>gi|242774708|ref|XP_002478495.1| nonsense transcript regulator, putative [Talaromyces stipitatus
ATCC 10500]
gi|218722114|gb|EED21532.1| nonsense transcript regulator, putative [Talaromyces stipitatus
ATCC 10500]
Length = 1093
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 74/207 (35%), Positives = 113/207 (54%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLRPYVFFDVIHGRESH 61
L+VQYRMHP + +FPS FY+G L + S+ L +V + PV + F G E
Sbjct: 669 LNVQYRMHPCLSEFPSNMFYEGSLQNGVSMAQRLRRDVDFPWPVAENPMMFWSNLGNEEI 728
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFR--NVL 119
SY N EA E + G+ +GIITPY+ Q + +
Sbjct: 729 SASGTSYLNRTEAAN----VEKIVTRFFKAGVQPSDIGIITPYEGQRSYVVSSMQATGTF 784
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
E K++ + +VDAFQG+E+D I++SCVR+++H G+GF++D RR+NVALTRA+ + ++
Sbjct: 785 KKEHYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVALTRAKYGVVIL 844
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN L++ W L+ K R C ++
Sbjct: 845 GNPKVLSKHPLWNYLLLHFKERKCLVE 871
>gi|212532107|ref|XP_002146210.1| nonsense transcript regulator, putative [Talaromyces marneffei ATCC
18224]
gi|210071574|gb|EEA25663.1| nonsense transcript regulator, putative [Talaromyces marneffei ATCC
18224]
Length = 1093
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 74/207 (35%), Positives = 113/207 (54%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLRPYVFFDVIHGRESH 61
L+VQYRMHP + +FPS FY+G L + S+ L +V + PV + F G E
Sbjct: 669 LNVQYRMHPCLSEFPSNMFYEGSLQNGVSMAQRLRRDVDFPWPVAENPMMFWSNLGNEEI 728
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFR--NVL 119
SY N EA E + G+ +GIITPY+ Q + +
Sbjct: 729 SASGTSYLNRTEAAN----VEKIVTRFFKAGVQPSGIGIITPYEGQRSYVVSSMQATGTF 784
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
E K++ + +VDAFQG+E+D I++SCVR+++H G+GF++D RR+NVALTRA+ + ++
Sbjct: 785 KKEHYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVALTRAKYGVVIL 844
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN L++ W L+ K R C ++
Sbjct: 845 GNPKVLSKHPLWNYLLLHFKERKCLVE 871
>gi|345491346|ref|XP_003426577.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 2
[Nasonia vitripennis]
Length = 1127
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 117/211 (55%), Gaps = 16/211 (7%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRL-----TDSESVINLPDEVYYKDPVLRPYVFFDVIHG 57
L VQYRMHP + FPS FY+G L D ++ ++ + P +FF V G
Sbjct: 683 LEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLL----KIDFPWPAPDKPMFFYVTQG 738
Query: 58 RESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EF 115
+E G SY N EA E + G+ +G+ITPY+ Q L ++
Sbjct: 739 QEEIAGSGTSYLNRTEASN----VEKITTRFLRCGVKPEQIGVITPYEGQRAYLVQYMQY 794
Query: 116 RNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRA 174
+ L+S+ +++ + +VDAFQG+E+D+IIMSCVR++ H G+GF+ D RR+NVALTRA+
Sbjct: 795 QGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRLNVALTRAKYG 854
Query: 175 LWVMGNAGALTQSDDWAALIADSKARNCYMD 205
+ ++GN L++ W L++ K + ++
Sbjct: 855 IIIVGNPKVLSKQPLWNHLLSFYKEQKVLVE 885
>gi|358395794|gb|EHK45181.1| hypothetical protein TRIATDRAFT_243374 [Trichoderma atroviride IMI
206040]
Length = 1083
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/211 (36%), Positives = 119/211 (56%), Gaps = 16/211 (7%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSES-VINLPDEVYYKDPVLR-PYVFFDVIHGRES 60
L QYRMHP + +FPS FY G L + + + +V + PV P +F+ I G E
Sbjct: 675 LKTQYRMHPCLSEFPSNMFYDGTLQNGITHEQRVRKDVDFPWPVTEMPMMFWSNI-GHEE 733
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSM---GLGKVTVGIITPYKLQLKCLQHEFRN 117
SY N EA +++KT+ G+ +G+ITPY+ Q + +N
Sbjct: 734 ISTSGTSYLNRTEAS-------NVEKTVTRFFKAGVRPSEIGVITPYEGQRSYIVSTMQN 786
Query: 118 --VLNSEEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRA 174
E KD+ + +VDAFQG+E+D I++SCVR++ N G+GF++D RR+NVALTRA+
Sbjct: 787 SGTYKKEMYKDVEVASVDAFQGREKDFIVLSCVRSNDNQGIGFLSDPRRLNVALTRAKYG 846
Query: 175 LWVMGNAGALTQSDDWAALIADSKARNCYMD 205
L ++GN L++ + W L+A K R C+++
Sbjct: 847 LVILGNPKVLSKHELWHNLLAHFKDRKCFVE 877
>gi|409045768|gb|EKM55248.1| hypothetical protein PHACADRAFT_28301 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1067
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 118/207 (57%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + +FPS FY+G L + + L V + PV +FF G+E
Sbjct: 663 LQVQYRMHPCLSEFPSNMFYEGTLQNGVTAPERLRKNVDFPWPVPDTPMFFYQNLGQEEI 722
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
S+ N EA + + + K KS G+ +G++TPY+ Q + + +F L
Sbjct: 723 SSSGTSFLNRTEAS---NVEKIVTKFFKS-GVVPNQIGVVTPYEGQRSYIVNYMQFNGTL 778
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+ K++ + +VDAFQG+E+D II+SCVR++ H G+GF+ D RR+NVALTRA+ + ++
Sbjct: 779 KKDLYKEIEVASVDAFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAKYGVVIL 838
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN L++ W L+ K +NC ++
Sbjct: 839 GNPKVLSKHPLWHYLLTHYKEKNCLVE 865
>gi|241598902|ref|XP_002404932.1| nonsense-mediated mRNA decay protein, putative [Ixodes scapularis]
gi|215502402|gb|EEC11896.1| nonsense-mediated mRNA decay protein, putative [Ixodes scapularis]
Length = 1122
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 112/201 (55%), Gaps = 16/201 (7%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDE-----VYYKDPVLRPYVFFDVIHG 57
L VQYRMHP + FPS FY+G L + DE V + P + F G
Sbjct: 680 LEVQYRMHPQLSKFPSNFFYEGSLQNGV----FADERRMKGVDFPWPQPDKPMLFYACQG 735
Query: 58 RESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCL-QH-EF 115
+E G SY N EA L E + + +GIITPY+ Q L QH +F
Sbjct: 736 QEEMAGSGTSYLNRTEAA----LVEKIATRFLRSAVKPQQIGIITPYEGQRAYLVQHMQF 791
Query: 116 RNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRA 174
+ L+++ +++ + +VDAFQG+E+D+I+MSCVR++ H G+GF+ D RR+NVALTRAR
Sbjct: 792 QGALHAKLYQEIEVASVDAFQGREKDLIVMSCVRSNEHQGIGFLNDPRRLNVALTRARYG 851
Query: 175 LWVMGNAGALTQSDDWAALIA 195
+ ++GN L++ W L++
Sbjct: 852 IIIVGNPKVLSKQPLWNHLLS 872
>gi|345491350|ref|XP_001604124.2| PREDICTED: regulator of nonsense transcripts 1-like isoform 1
[Nasonia vitripennis]
Length = 1105
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 117/211 (55%), Gaps = 16/211 (7%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRL-----TDSESVINLPDEVYYKDPVLRPYVFFDVIHG 57
L VQYRMHP + FPS FY+G L D ++ ++ + P +FF V G
Sbjct: 670 LEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLL----KIDFPWPAPDKPMFFYVTQG 725
Query: 58 RESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EF 115
+E G SY N EA E + G+ +G+ITPY+ Q L ++
Sbjct: 726 QEEIAGSGTSYLNRTEASN----VEKITTRFLRCGVKPEQIGVITPYEGQRAYLVQYMQY 781
Query: 116 RNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRA 174
+ L+S+ +++ + +VDAFQG+E+D+IIMSCVR++ H G+GF+ D RR+NVALTRA+
Sbjct: 782 QGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRLNVALTRAKYG 841
Query: 175 LWVMGNAGALTQSDDWAALIADSKARNCYMD 205
+ ++GN L++ W L++ K + ++
Sbjct: 842 IIIVGNPKVLSKQPLWNHLLSFYKEQKVLVE 872
>gi|403412933|emb|CCL99633.1| predicted protein [Fibroporia radiculosa]
Length = 1074
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 118/207 (57%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + +FPS FY+G L + + L V + PV +FF G+E
Sbjct: 668 LQVQYRMHPCLSEFPSNMFYEGTLQNGVTAPERLRKNVDFPWPVPDTPMFFYQNLGQEEI 727
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
S+ N EA + + + K KS G+ +G++TPY+ Q + + +F L
Sbjct: 728 SSSGTSFLNRTEAS---NVEKIVTKFFKS-GVVPSQIGVVTPYEGQRSYIVNYMQFNGSL 783
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+ K++ + +VDAFQG+E+D II+SCVR++ H G+GF+ D RR+NVALTRA+ + ++
Sbjct: 784 KKDLYKEIEVASVDAFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAKYGVVIL 843
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN L++ W L+ K +NC ++
Sbjct: 844 GNPKVLSKHPLWHYLLTHYKEKNCLVE 870
>gi|47216421|emb|CAG01972.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1123
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 111/196 (56%), Gaps = 8/196 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY-YKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + FPS FY+G L + + + + + ++ P +FF V G+E
Sbjct: 677 LQVQYRMHPALSAFPSNIFYEGSLQNGVTSADRVKKGFDFQWPQPDKPMFFYVTQGQEEI 736
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
SY N EA E + L G +GIITPY+ Q L +F L
Sbjct: 737 ASSGTSYLNRTEAAN----VEKITTRLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSL 792
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+++ +++ I +VDAFQG+E+D II+SCVRA+ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 793 HTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIV 852
Query: 179 GNAGALTQSDDWAALI 194
GN AL++ W L+
Sbjct: 853 GNPKALSKQPLWNHLL 868
>gi|342879017|gb|EGU80294.1| hypothetical protein FOXB_09221 [Fusarium oxysporum Fo5176]
Length = 1083
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/207 (35%), Positives = 113/207 (54%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLRPYVFFDVIHGRESH 61
L++QYRMHP + +FPS FY G L + + N L +V + PV + F G E
Sbjct: 675 LNIQYRMHPCLSEFPSNMFYDGSLQNGVTHENRLRKDVDFPWPVGEMPMMFWSNLGHEEI 734
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRN--VL 119
SY N EA E G+ +G+ITPY+ Q + +N
Sbjct: 735 SASGTSYLNRTEASN----VEKAVTRFFKAGVKPADIGVITPYEGQRSYIVTTMQNSGTY 790
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRALWVM 178
E K++ + +VDAFQG+E+D I++SCVR++ N G+GF++D RR+NVALTRA+ L ++
Sbjct: 791 KKEYYKEVEVASVDAFQGREKDFIVLSCVRSNDNQGIGFLSDPRRLNVALTRAKYGLVIL 850
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN L++ + W L+ K R C+++
Sbjct: 851 GNPKVLSKHELWHNLLVHFKDRKCFVE 877
>gi|46136829|ref|XP_390106.1| RNT1_NEUCR Regulator of nonsense transcripts 1 homolog [Gibberella
zeae PH-1]
Length = 1083
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/207 (35%), Positives = 118/207 (57%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLRPYVFFDVIHGRESH 61
L++QYRMHP + +FPS FY G L + + N L +V + PV + F G E
Sbjct: 675 LNIQYRMHPCLSEFPSNMFYDGSLQNGVTHENRLRKDVDFPWPVGEMPMMFWSNLGHEEI 734
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRN--VL 119
SY N EA + + + + K+ G+ +G+ITPY+ Q + +N
Sbjct: 735 SASGTSYLNRTEAS---NVEKAVTRFFKA-GVKPADIGVITPYEGQRSYIVTTMQNSGTY 790
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRALWVM 178
E K++ + +VDAFQG+E+D I++SCVR++ N G+GF++D RR+NVALTRA+ L ++
Sbjct: 791 KKEYYKEVEVASVDAFQGREKDFIVLSCVRSNDNQGIGFLSDPRRLNVALTRAKYGLVIL 850
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN L++ + W L+ K R C+++
Sbjct: 851 GNPKVLSKHELWHNLLVHFKDRKCFVE 877
>gi|402085799|gb|EJT80697.1| regulator-nonsense transcripts 1 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 1097
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/208 (35%), Positives = 117/208 (56%), Gaps = 10/208 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVL-RPYVFFDVIHGRES 60
L+VQYRMHP + +FPS FY+G L + ++ L +V + PV P +F+ + G E
Sbjct: 680 LNVQYRMHPCLSEFPSNMFYEGSLQNGVTIQQRLRRDVDFPWPVGDMPMMFWSNL-GNEE 738
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV-- 118
SY N EA E + G+ +G+ITPY+ Q + +N
Sbjct: 739 ISASGTSYLNRTEASN----VEKIVTRFFKAGVKPGDIGVITPYEGQRSYIVSTMQNTGT 794
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRALWV 177
E K++ + +VDAFQG+E+D I++SCVR++ N G+GF++D RR+NVALTRA+ + +
Sbjct: 795 FKKESYKEVEVASVDAFQGREKDFIVLSCVRSNENQGIGFLSDPRRLNVALTRAKYGVVI 854
Query: 178 MGNAGALTQSDDWAALIADSKARNCYMD 205
+GN L++ + W L+ + R C +D
Sbjct: 855 IGNPKVLSKHELWHHLLVHFRDRKCLVD 882
>gi|410921828|ref|XP_003974385.1| PREDICTED: regulator of nonsense transcripts 1-like [Takifugu
rubripes]
Length = 1099
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/207 (36%), Positives = 115/207 (55%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY-YKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + FPS FY+G L + + + + + ++ P +FF V G+E
Sbjct: 679 LQVQYRMHPALSAFPSNIFYEGSLQNGVTAGDRIKKGFDFQWPQPEKPMFFYVTQGQEEI 738
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
SY N EA E + L G +GIITPY+ Q L +F L
Sbjct: 739 ASSGTSYLNRTEAAN----VEKITTRLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSL 794
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+++ + + I +VDAFQG+E+D II+SCVRA+ H G+GF+ D RR+NVALTRA+ + ++
Sbjct: 795 HTKLYQQVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAKYGVIIV 854
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN AL++ W L+ + K + ++
Sbjct: 855 GNPKALSKQPLWNNLLNNYKEQKVLVE 881
>gi|408397555|gb|EKJ76696.1| hypothetical protein FPSE_03107 [Fusarium pseudograminearum CS3096]
Length = 1083
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/207 (35%), Positives = 118/207 (57%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLRPYVFFDVIHGRESH 61
L++QYRMHP + +FPS FY G L + + N L +V + PV + F G E
Sbjct: 675 LNIQYRMHPCLSEFPSNMFYDGSLQNGVTHENRLRKDVDFPWPVGEMPMMFWSNLGHEEI 734
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRN--VL 119
SY N EA + + + + K+ G+ +G+ITPY+ Q + +N
Sbjct: 735 SASGTSYLNRTEAS---NVEKAVTRFFKA-GVKPADIGVITPYEGQRSYIVTTMQNSGTY 790
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRALWVM 178
E K++ + +VDAFQG+E+D I++SCVR++ N G+GF++D RR+NVALTRA+ L ++
Sbjct: 791 KKEYYKEVEVASVDAFQGREKDFIVLSCVRSNDNQGIGFLSDPRRLNVALTRAKYGLVIL 850
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN L++ + W L+ K R C+++
Sbjct: 851 GNPKVLSKHELWHNLLVHFKDRKCFVE 877
>gi|388852346|emb|CCF53961.1| probable NAM7-nonsense-mediated mRNA decay protein [Ustilago
hordei]
Length = 1091
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/207 (36%), Positives = 111/207 (53%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + +FPS FY+G L + + L EV + PV +FF G+E
Sbjct: 710 LQVQYRMHPCLSEFPSNMFYEGTLQNGVTAPERLRREVDFPWPVPWLPMFFFQNLGQEEI 769
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCL--QHEFRNVL 119
S+ N EA E + G+ +GI+TPY+ Q + + L
Sbjct: 770 SSSGTSFLNRTEASN----VEKIVTRFFKAGVKPSQIGIVTPYEGQRSYIVNHMQLHGSL 825
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
E K + + +VDAFQG+E+D II+SCVR++ H G+GF++D RR+NVALTRAR L ++
Sbjct: 826 KKELYKQVEVASVDAFQGREKDYIILSCVRSNEHQGIGFLSDPRRLNVALTRARYGLVIL 885
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN L + W L+ K + C ++
Sbjct: 886 GNPKVLNKHPLWHYLLVHYKEKGCLVE 912
>gi|391341257|ref|XP_003744947.1| PREDICTED: regulator of nonsense transcripts 1-like [Metaseiulus
occidentalis]
Length = 1137
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/206 (36%), Positives = 114/206 (55%), Gaps = 26/206 (12%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLR----PY------VFF 52
L VQYRMHP + +FPS FY+G L + VY ++ L+ P+ +FF
Sbjct: 672 LEVQYRMHPSLSEFPSNFFYEGSLQNG---------VYAEERRLKGVDFPFPQPDKPMFF 722
Query: 53 DVIHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQ 112
+G+E SY N EA L E + + +G+ITPY+ Q L
Sbjct: 723 YCCNGQEEIAASGTSYLNRTEAA----LVEKIVTRFLKSSVKPEQIGVITPYEGQRAFLV 778
Query: 113 H--EFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALT 169
++ L+S+ +D+ + +VDAFQG+E+D+IIMSCVR++ H G+GF+ D RR+NVALT
Sbjct: 779 QYMQYSGSLHSKLYQDIEVASVDAFQGREKDLIIMSCVRSNEHQGIGFLNDPRRLNVALT 838
Query: 170 RARRALWVMGNAGALTQSDDWAALIA 195
RAR + ++GN L++ W L+A
Sbjct: 839 RARYGIIIVGNPKVLSKQPLWNHLLA 864
>gi|116197821|ref|XP_001224722.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88178345|gb|EAQ85813.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 1071
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/207 (35%), Positives = 112/207 (54%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLRPYVFFDVIHGRESH 61
L+VQYRMHP + FPS FY G L + +V L +V + PV + F G E
Sbjct: 660 LNVQYRMHPCLSKFPSNMFYDGSLQNGVTVSERLRTDVDFPWPVADTPMMFWSNLGNEEI 719
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV--L 119
SY N EA E + G+ + +G+ITPY+ Q + +N
Sbjct: 720 SASGTSYLNRTEA----ANVEKIVTRFLKAGVKALDIGVITPYEGQRSYIVSTMQNTGTF 775
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRALWVM 178
E K++ + +VDAFQG+E+D I++SCVR++ N G+GF++D RR+NVALTRA+ L ++
Sbjct: 776 KKETYKEVEVASVDAFQGREKDFIVLSCVRSNDNQGIGFLSDPRRLNVALTRAKYGLVII 835
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN L++ + W L+ K C ++
Sbjct: 836 GNPKVLSKHELWHHLLVHFKDCKCLVE 862
>gi|412991544|emb|CCO16389.1| tRNA-splicing endonuclease, putative [Bathycoccus prasinos]
Length = 909
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/226 (37%), Positives = 123/226 (54%), Gaps = 27/226 (11%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
+L QYRMHP I +PS FY G+L ++E V N + + PY +V G+ H
Sbjct: 701 MLKTQYRMHPEICAWPSERFYGGKLQNAECVENSNNTM--------PYSIVNVHSGK--H 750
Query: 62 RGGSVSYQNVD-EAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFR--NV 118
R S S + D EA+ V L L+K + +GIIT Y Q++ + + R NV
Sbjct: 751 RVSSSSSISNDREAEIAVDLVLKLRKK-------ALKIGIITFYTAQVRLIANLMRAKNV 803
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVM 178
+ + D++ +TVD+FQG E DVII+SCVR S GF++D RR+NV+LTRA++ L V+
Sbjct: 804 VPAGSDDDVFASTVDSFQGSEADVIILSCVRTSKTSAGFLSDSRRLNVSLTRAKKKLIVL 863
Query: 179 GNAGALT------QSDDWAALIADSKARNCYMDMDSLPKEFSVALA 218
NA AL + D +LI ++K RN +S PK + A
Sbjct: 864 CNADALAGGGETLEMLDLKSLIENAKTRNVLFS-ESEPKILDMVAA 908
>gi|251836854|pdb|2WJV|A Chain A, Crystal Structure Of The Complex Between Human Nonsense
Mediated Decay Factors Upf1 And Upf2
gi|251836855|pdb|2WJV|B Chain B, Crystal Structure Of The Complex Between Human Nonsense
Mediated Decay Factors Upf1 And Upf2
gi|251836858|pdb|2WJY|A Chain A, Crystal Structure Of The Complex Between Human Nonsense
Mediated Decay Factors Upf1 And Upf2 Orthorhombic Form
Length = 800
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 111/196 (56%), Gaps = 8/196 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY-YKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + FPS FY+G L + + + + + ++ P +FF V G+E
Sbjct: 584 LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEI 643
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
SY N EA E + L G +GIITPY+ Q L +F L
Sbjct: 644 ASSGTSYLNRTEAAN----VEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSL 699
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+++ +++ I +VDAFQG+E+D II+SCVRA+ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 700 HTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIV 759
Query: 179 GNAGALTQSDDWAALI 194
GN AL++ W L+
Sbjct: 760 GNPKALSKQPLWNHLL 775
>gi|126030570|pdb|2GJK|A Chain A, Structural And Functional Insights Into The Human Upf1
Helicase Core
gi|126030579|pdb|2GK6|A Chain A, Structural And Functional Insights Into The Human Upf1
Helicase Core
gi|126030580|pdb|2GK6|B Chain B, Structural And Functional Insights Into The Human Upf1
Helicase Core
gi|126030581|pdb|2GK7|A Chain A, Structural And Functional Insights Into The Human Upf1
Helicase Core
Length = 624
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 111/196 (56%), Gaps = 8/196 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY-YKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + FPS FY+G L + + + + + ++ P +FF V G+E
Sbjct: 408 LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEI 467
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
SY N EA E + L G +GIITPY+ Q L +F L
Sbjct: 468 ASSGTSYLNRTEAAN----VEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSL 523
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+++ +++ I +VDAFQG+E+D II+SCVRA+ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 524 HTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIV 583
Query: 179 GNAGALTQSDDWAALI 194
GN AL++ W L+
Sbjct: 584 GNPKALSKQPLWNHLL 599
>gi|327200471|pdb|2XZO|A Chain A, Upf1 Helicase - Rna Complex
gi|327200473|pdb|2XZP|A Chain A, Upf1 Helicase
Length = 623
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 111/196 (56%), Gaps = 8/196 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY-YKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + FPS FY+G L + + + + + ++ P +FF V G+E
Sbjct: 407 LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEI 466
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
SY N EA E + L G +GIITPY+ Q L +F L
Sbjct: 467 ASSGTSYLNRTEAAN----VEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSL 522
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+++ +++ I +VDAFQG+E+D II+SCVRA+ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 523 HTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIV 582
Query: 179 GNAGALTQSDDWAALI 194
GN AL++ W L+
Sbjct: 583 GNPKALSKQPLWNHLL 598
>gi|388851768|emb|CCF54574.1| related to SEN1 protein [Ustilago hordei]
Length = 900
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/204 (36%), Positives = 115/204 (56%), Gaps = 6/204 (2%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LLS+QYRMHP I FP++ FY +L D + + +++ + RP+ F ES
Sbjct: 564 LLSIQYRMHPEISLFPAKAFYGSKLQDGPDMAESTHQPWHRYELTRPFKFLST-KAPESP 622
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
G S N +EA + LY L +T + +GI+T YK Q+ L+ F+
Sbjct: 623 -GPFHSIINKEEANVALALYGRL-RTDHAQENFDYRIGIVTMYKAQVFELKQTFQQRYGK 680
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRA--SNHGVGFVADIRRMNVALTRARRALWVMG 179
+ + + NTVD FQGQE+D+II+SCVR+ +GF+ D RR+NVA+TRA+ L+++G
Sbjct: 681 DIVERIDFNTVDGFQGQEKDIIILSCVRSLPKPSSIGFLRDGRRLNVAVTRAKSNLFIIG 740
Query: 180 NAGALTQSDD-WAALIADSKARNC 202
NA L + D W +L+A ++ R
Sbjct: 741 NAEHLRRGDAIWESLVAAAEQREA 764
>gi|152990986|ref|YP_001356708.1| DNA/RNA helicase [Nitratiruptor sp. SB155-2]
gi|151422847|dbj|BAF70351.1| DNA/RNA helicase [Nitratiruptor sp. SB155-2]
Length = 726
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/215 (35%), Positives = 120/215 (55%), Gaps = 20/215 (9%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPD-EVYYKDP-----VL--RPYVFFD 53
+L +QYRMH I F + FY+G+L SV + + K+P +L P VF D
Sbjct: 510 MLRIQYRMHEKIMQFSNEQFYEGKLIADASVKHHTICDFELKEPKRFEAILGCEPLVFVD 569
Query: 54 V--IHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCL 111
+ +E S SY+N EAK L E L SMGL +GII+PY Q+K
Sbjct: 570 TKGVEAKEMLAQRSTSYENEKEAKIVSALSEELL----SMGLKTEDIGIISPYAAQVK-- 623
Query: 112 QHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTR 170
+ ++ ++E + + + TVD FQG+E++VII+S VR++ +G +GF+ D+RR+NVA+TR
Sbjct: 624 --RIKKLVETDE-RIIEVKTVDGFQGREKEVIIISFVRSNENGKIGFLKDLRRLNVAITR 680
Query: 171 ARRALWVMGNAGALTQSDDWAALIADSKARNCYMD 205
A+R L +G+A L + + A + K Y++
Sbjct: 681 AKRKLICIGDASTLIHDETYKAFLEYVKKEGKYIE 715
>gi|449685514|ref|XP_002161143.2| PREDICTED: regulator of nonsense transcripts 1-like [Hydra
magnipapillata]
Length = 1153
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 111/207 (53%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDE-VYYKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + +FPS FY G L + +V V + PV +FF G+E
Sbjct: 718 LQVQYRMHPSLSEFPSNLFYDGTLQNGVTVAERSQPGVDFPWPVGDKPMFFYATTGQEEI 777
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCL--QHEFRNVL 119
SY N EA E + G+ +GIITPY+ Q + +F L
Sbjct: 778 SSSGTSYLNRTEA----ATVEKIATRFLRAGVKPEQMGIITPYEGQRAYIVAYMQFSGSL 833
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+S +++ + +VDAFQG+E+D IIMSC R++ H G+GF+ D RR+NVALTR++ L ++
Sbjct: 834 HSSLYQNIEVASVDAFQGREKDYIIMSCARSNEHQGIGFLKDPRRLNVALTRSKYGLIII 893
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN L++ W L+ D K + ++
Sbjct: 894 GNPKVLSKQPLWNHLLNDYKEKRVLVE 920
>gi|402594446|gb|EJW88372.1| hypothetical protein WUBG_00717 [Wuchereria bancrofti]
Length = 1089
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/236 (33%), Positives = 129/236 (54%), Gaps = 13/236 (5%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESHR 62
L VQYRMHP + FPS FY+G L + E + D ++ PV + F +G+E
Sbjct: 662 LQVQYRMHPALSSFPSNVFYEGSLQNGERQLIGID---WQWPVPDKPMMFWSCYGQEELS 718
Query: 63 GGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVLN 120
S+ N EA E L G+ +GIITPY+ Q + + + L+
Sbjct: 719 SSGTSFLNRTEAAN----VEKLATRFLKAGIKPEQIGIITPYEGQRSYIVQFMQTQGALH 774
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVMG 179
S+ ++ + VDAFQG+E+D+II++CVR+++H G+GF+ D RR+NVALTRA+ L ++G
Sbjct: 775 SKLYLEMEVANVDAFQGREKDIIIVTCVRSNDHQGIGFLNDSRRLNVALTRAKFGLIIVG 834
Query: 180 NAGALTQSDDWAALIADSKARNCYMD--MDSL-PKEFSVALAAKAPGYGPLQGKIP 232
NA L++ W L++ K + C ++ +++L P +++ + P + IP
Sbjct: 835 NAKVLSRHPLWNYLLSMFKEKGCLVEGPLNNLKPSPITLSKPRRIPNIMSMNRFIP 890
>gi|154305574|ref|XP_001553189.1| hypothetical protein BC1G_08556 [Botryotinia fuckeliana B05.10]
gi|347828532|emb|CCD44229.1| similar to regulator of nonsense transcripts 1 [Botryotinia
fuckeliana]
Length = 1100
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 114/207 (55%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLRPYVFFDVIHGRESH 61
L+VQYRMHP + +FPS FY G L + ++ L +V + PV + F G E
Sbjct: 679 LNVQYRMHPCLSEFPSNMFYDGSLQNGVTMQQRLRRDVDFPWPVADTPMMFWSNLGNEEI 738
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV--L 119
SY N EA E + G+ +G+ITPY+ Q + +N
Sbjct: 739 SASGTSYLNRTEASN----VEKIVTRFFKAGVQPGDIGVITPYEGQRSYVVTSMQNAGSF 794
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
E K++ + +VDAFQG+E+D II+SCVR+++H G+GF++D RR+NVALTRA+ L ++
Sbjct: 795 KKEHYKEVEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLVIV 854
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN L++ W L+ K R+C ++
Sbjct: 855 GNPKVLSKHPLWHYLLQHFKDRSCLVE 881
>gi|308810613|ref|XP_003082615.1| tRNA-splicing endonuclease positive effector (SEN1) (ISS)
[Ostreococcus tauri]
gi|116061084|emb|CAL56472.1| tRNA-splicing endonuclease positive effector (SEN1) (ISS)
[Ostreococcus tauri]
Length = 545
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/203 (38%), Positives = 120/203 (59%), Gaps = 19/203 (9%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLP--DEVYYKDPVLRPYVFFDVIHGRE 59
LL +QYRMHP I +FPS+ FY G++ + + + P V + P + P VF + I+ E
Sbjct: 325 LLDLQYRMHPLIAEFPSQAFYSGKVGSAPTPQDRPIVPGVAWPKPNV-PVVFLE-INDAE 382
Query: 60 SHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGL-GKVTVGIITPYKLQLKCLQHEF--- 115
S NV+EAK + + ++K L S L G +G+I+PY Q++ LQ E+
Sbjct: 383 CRAPDGNSLYNVEEAKTAITV---VKKILASGDLAGPGDIGVISPYAAQVRLLQEEYGVL 439
Query: 116 ----RNVLN---SEEGKDLYINTVDAFQGQERDVIIMSCVRA-SNHGVGFVADIRRMNVA 167
RN L+ ++ K+L I +VD FQG+E++VI++ VR+ + G+GFV D RR+NV
Sbjct: 440 GTAKRNYLDYTDEDKMKELEIRSVDGFQGREKEVIVLCTVRSNTGGGIGFVDDPRRLNVG 499
Query: 168 LTRARRALWVMGNAGALTQSDDW 190
+TRARR L V+GN L+ ++ W
Sbjct: 500 ITRARRGLIVLGNRRTLSTNEIW 522
>gi|303320095|ref|XP_003070047.1| nonsense transcript regulator, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240109733|gb|EER27902.1| nonsense transcript regulator, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|320031876|gb|EFW13833.1| ATP-dependent helicase NAM7 [Coccidioides posadasii str. Silveira]
gi|392865836|gb|EAS31677.2| ATP-dependent helicase NAM7 [Coccidioides immitis RS]
Length = 1101
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/208 (36%), Positives = 115/208 (55%), Gaps = 10/208 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDS-ESVINLPDEVYYKDPVL-RPYVFFDVIHGRES 60
L+VQYRMHP + FPS FY+G L + S L +V + PV +P +F+ + G E
Sbjct: 676 LNVQYRMHPCLSAFPSNMFYEGSLQNGVTSDDRLLKDVDFPWPVADKPMMFWSNL-GNEE 734
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCL--QHEFRNV 118
SY N EA E + G+ +GIITPY+ Q + +
Sbjct: 735 ISASGTSYLNRTEAAN----VEKIVTRFFKAGVKPSAIGIITPYEGQRSYVVSSMQLNGT 790
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWV 177
E K++ + +VDAFQG+E+D I++SCVR+++H G+GF++D RR+NVALTRA+ L +
Sbjct: 791 YKKEAYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLVI 850
Query: 178 MGNAGALTQSDDWAALIADSKARNCYMD 205
+GN L++ W L+ K NC ++
Sbjct: 851 LGNPKVLSKHPLWNYLLRHFKEGNCLVE 878
>gi|404449013|ref|ZP_11014005.1| type III restriction enzyme, res subunit [Indibacter alkaliphilus
LW1]
gi|403765737|gb|EJZ26615.1| type III restriction enzyme, res subunit [Indibacter alkaliphilus
LW1]
Length = 642
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 126/217 (58%), Gaps = 24/217 (11%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHG--R 58
++L QYRMH I F +RHFYQG L + + + ++PVL F D
Sbjct: 428 VMLREQYRMHELIMGFSNRHFYQGELMAAPN--TQAHYILEEEPVLE---FVDTSGSGYN 482
Query: 59 ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKV-----TVGIITPYKLQLKCLQ- 112
E S+S N++EA+F + +L+ +K +GL ++ ++G+I PY+ Q++ L
Sbjct: 483 EQVEEESLSTYNLEEARFAL---NYLESFVKRIGLRQLKEREFSIGLIAPYRAQVRRLNE 539
Query: 113 -----HEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNV 166
+EF N+ + E L I+++D FQG+ERDV+++S VR++ G +GF+AD RRMNV
Sbjct: 540 LLFDTYEFPNLRSYSEF--LTIDSIDGFQGRERDVMLISLVRSNAKGEIGFLADTRRMNV 597
Query: 167 ALTRARRALWVMGNAGALTQSDDWAALIADSKARNCY 203
ALTRA+R + V+G++ L+ + A + + +NCY
Sbjct: 598 ALTRAKRKMIVIGDSATLSSHSFYTAFLDYVEEKNCY 634
>gi|146411955|ref|XP_001481949.1| hypothetical protein PGUG_05712 [Meyerozyma guilliermondii ATCC
6260]
Length = 949
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/238 (35%), Positives = 129/238 (54%), Gaps = 17/238 (7%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTD--SESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
L VQYRMHP + +FPS FY+G L + S +E + PVL + F +GRE
Sbjct: 629 LEVQYRMHPCLSEFPSNMFYEGSLQNGVSSESRTFKNETF-PWPVLDFPMMFWANYGREE 687
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLK-CLQHEFRN-- 117
SY N EA E + L G+ +G++TPY+ Q LQH
Sbjct: 688 ISASGYSYLNRVEAMN----VEKIITRLFKQGVKAEQIGVVTPYEGQRAYILQHMLLTGS 743
Query: 118 -VLNSEEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRAL 175
V E+ ++ + +VDAFQG+E+D II+SCVRA+ HG+GF++D RR+NVALTRA+ L
Sbjct: 744 LVDKREQYSEVEVASVDAFQGREKDYIILSCVRANETHGIGFLSDSRRLNVALTRAKYGL 803
Query: 176 WVMGNAGALTQSDDWAALIADSKARNCYMD--MDSLPKEFSVALAAKAPG-YGPLQGK 230
++GN L+++ W L+ + + C ++ +D+L + S+ + P P+Q +
Sbjct: 804 VIVGNPRCLSKNKLWNHLLIHFREKGCLVEGPLDNL--QLSMVQLRQTPASIMPMQTR 859
>gi|145353588|ref|XP_001421091.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581327|gb|ABO99384.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 466
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/214 (36%), Positives = 116/214 (54%), Gaps = 13/214 (6%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL +QYRMHP I +FPS FY+G++ + + P P V F I ES
Sbjct: 249 LLDMQYRMHPQIAEFPSLAFYKGKVGSVPTPQDRPLVPGIAWPSPNVPVAFVEISAPESR 308
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEF------ 115
S NV EAK + + L G G + G+I+PY Q++ LQ E+
Sbjct: 309 APDGNSLYNVGEAKMAIGVVRKLLAAGDLAGPGDI--GVISPYAAQVRRLQEEYGVGGSP 366
Query: 116 -RNVLN-SEEGK--DLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTR 170
RN L+ +EE K +L I +VD FQG+E++VI++ VR++ G +GFVAD RR+NV +TR
Sbjct: 367 KRNYLDYTEEDKIEELEIRSVDGFQGREKEVIVLCTVRSNPSGDIGFVADPRRLNVGITR 426
Query: 171 ARRALWVMGNAGALTQSDDWAALIADSKARNCYM 204
A+R L V+GN L+ ++ W + +NC +
Sbjct: 427 AKRGLIVLGNRKTLSNNEMWRSWFKWIDEQNCAV 460
>gi|15679629|ref|NP_276746.1| transcriptional control factor (enhancer-binding protein)
[Methanothermobacter thermautotrophicus str. Delta H]
gi|2622761|gb|AAB86107.1| transcriptional control factor (enhancer-binding protein)
[Methanothermobacter thermautotrophicus str. Delta H]
Length = 642
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 112/197 (56%), Gaps = 27/197 (13%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSES---------VINLPD-EVYYKDPVLRPYVF 51
+L+ QYRMHP I +FP+R FY GR+ S + ++PD ++ K P +F
Sbjct: 428 MLNCQYRMHPAIMEFPNREFYDGRIRAHPSLEDISIRDIIEDVPDSDICQKLADPDPVLF 487
Query: 52 FDV--IHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLK 109
D + G E GS S QN EA V + ++L MG+ +GIITPY Q+
Sbjct: 488 IDTSGLDGCERRLKGSTSIQNPLEADLAVII----SRSLMRMGVKPEEIGIITPYDDQVD 543
Query: 110 CLQHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVAL 168
+ D+ +N+VD FQG+E+DVII+S VR++ +G +GF+ D+RR+NV+L
Sbjct: 544 LISSMI----------DVEVNSVDGFQGREKDVIIISMVRSNRNGSIGFLKDLRRLNVSL 593
Query: 169 TRARRALWVMGNAGALT 185
TRARR L ++G++ L+
Sbjct: 594 TRARRKLIIIGDSRTLS 610
>gi|119183909|ref|XP_001242931.1| hypothetical protein CIMG_06827 [Coccidioides immitis RS]
Length = 1089
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/208 (36%), Positives = 115/208 (55%), Gaps = 10/208 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDS-ESVINLPDEVYYKDPVL-RPYVFFDVIHGRES 60
L+VQYRMHP + FPS FY+G L + S L +V + PV +P +F+ + G E
Sbjct: 664 LNVQYRMHPCLSAFPSNMFYEGSLQNGVTSDDRLLKDVDFPWPVADKPMMFWSNL-GNEE 722
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCL--QHEFRNV 118
SY N EA E + G+ +GIITPY+ Q + +
Sbjct: 723 ISASGTSYLNRTEAAN----VEKIVTRFFKAGVKPSAIGIITPYEGQRSYVVSSMQLNGT 778
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWV 177
E K++ + +VDAFQG+E+D I++SCVR+++H G+GF++D RR+NVALTRA+ L +
Sbjct: 779 YKKEAYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLVI 838
Query: 178 MGNAGALTQSDDWAALIADSKARNCYMD 205
+GN L++ W L+ K NC ++
Sbjct: 839 LGNPKVLSKHPLWNYLLRHFKEGNCLVE 866
>gi|66827407|ref|XP_647058.1| hypothetical protein DDB_G0268914 [Dictyostelium discoideum AX4]
gi|60475110|gb|EAL73046.1| hypothetical protein DDB_G0268914 [Dictyostelium discoideum AX4]
Length = 4540
Score = 122 bits (306), Expect = 3e-25, Method: Composition-based stats.
Identities = 76/199 (38%), Positives = 111/199 (55%), Gaps = 19/199 (9%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEV---YYKDPVLRPYVFFDVIHGR 58
+L+VQYRMHP I FPS FY L D ++V++ D ++++ FFDV R
Sbjct: 3762 MLNVQYRMHPLISKFPSSQFYHDILKDGDNVVS-SDAYSLRFHENQDYGAIRFFDVTDSR 3820
Query: 59 ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV 118
E G S +N E L + L T + + GI+TPYKLQ K ++ ++ +
Sbjct: 3821 EER--GKTSIKNQLEITMVFTLIKKL--TQDHPETKQYSFGIVTPYKLQRKEIEDAYKQL 3876
Query: 119 ---LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRAL 175
LN E I T+D+FQG E+D++IMSCVR N +GF++D RR+NV++TRA+ L
Sbjct: 3877 NLSLNIE------IKTIDSFQGSEKDIMIMSCVR--NESIGFLSDRRRINVSITRAKYGL 3928
Query: 176 WVMGNAGALTQSDDWAALI 194
+++GNA L W LI
Sbjct: 3929 FIIGNATLLKLDRTWGELI 3947
>gi|322706853|gb|EFY98432.1| Regulator of nonsense transcripts 1 [Metarhizium anisopliae ARSEF
23]
Length = 1083
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 116/210 (55%), Gaps = 14/210 (6%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSES-VINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
L+ QYRMHP + +FPS FY G L + + L +V + P+ + F G E
Sbjct: 676 LTTQYRMHPCLSEFPSNMFYDGSLQNGITHEQRLRRDVEFPWPIAETPMMFWSNLGNEEI 735
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSM---GLGKVTVGIITPYKLQLKCLQHEFRNV 118
SY N EA +++KT+ G+ +G+ITPY+ Q + +N
Sbjct: 736 STSGTSYLNRTEAS-------NVEKTVTRFFKAGVKPSEIGVITPYEGQRSYIVTTMQNS 788
Query: 119 --LNSEEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRAL 175
E K++ + +VDAFQG+E+D I++SCVR++ N G+GF++D RR+NVALTRA+ L
Sbjct: 789 GSFKKEYYKEVEVASVDAFQGREKDFIVLSCVRSNENQGIGFLSDPRRLNVALTRAKYGL 848
Query: 176 WVMGNAGALTQSDDWAALIADSKARNCYMD 205
++GN L++ + W L+ K R C+++
Sbjct: 849 VILGNPKVLSKHELWHNLLVHFKDRKCFVE 878
>gi|322701174|gb|EFY92925.1| Regulator of nonsense transcripts 1 [Metarhizium acridum CQMa 102]
Length = 1083
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 116/210 (55%), Gaps = 14/210 (6%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSES-VINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
L+ QYRMHP + +FPS FY G L + + L +V + P+ + F G E
Sbjct: 676 LTTQYRMHPCLSEFPSNMFYDGSLQNGITHEQRLRKDVDFPWPIAETPMMFWSNLGNEEI 735
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSM---GLGKVTVGIITPYKLQLKCLQHEFRN- 117
SY N EA +++KT+ G+ +G+ITPY+ Q + +N
Sbjct: 736 STSGTSYLNRTEAS-------NVEKTVTRFFKAGVKPSEIGVITPYEGQRSYIVTTMQNS 788
Query: 118 -VLNSEEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRAL 175
E K++ + +VDAFQG+E+D I++SCVR++ N G+GF++D RR+NVALTRA+ L
Sbjct: 789 GTYKKEYYKEVEVASVDAFQGREKDFIVLSCVRSNENQGIGFLSDPRRLNVALTRAKYGL 848
Query: 176 WVMGNAGALTQSDDWAALIADSKARNCYMD 205
++GN L++ + W L+ K R C+++
Sbjct: 849 VILGNPKVLSKHELWHNLLVHFKDRKCFVE 878
>gi|323454972|gb|EGB10841.1| hypothetical protein AURANDRAFT_22049 [Aureococcus anophagefferens]
Length = 1026
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/208 (37%), Positives = 111/208 (53%), Gaps = 9/208 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTD--SESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
L VQYR HP + +FPS FY+G L + SE +L E + P + F V G E
Sbjct: 640 LQVQYRSHPCLSEFPSAMFYEGTLQNGVSEGERDLEGEPRFPWPNPEAPMMFYVCAGAEE 699
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV-- 118
S+ N EA L H K +GL +G+ITPY+ Q + H +
Sbjct: 700 MSASGTSFLNRSEAASIERLVTHYLK----LGLDPDQIGVITPYEGQRAYVVHHMASAGA 755
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWV 177
L ++ + + + +VD+FQG+E+DVII+SCVR++ H G+GF+ D RR+NVALTRA+ L +
Sbjct: 756 LRADVYERVEVASVDSFQGREKDVIILSCVRSNEHQGIGFLNDPRRLNVALTRAKYGLVI 815
Query: 178 MGNAGALTQSDDWAALIADSKARNCYMD 205
+G A L Q W L+ K C +
Sbjct: 816 LGAARVLAQDALWHELLTHFKKLGCVAE 843
>gi|337284021|ref|YP_004623495.1| DNA helicase [Pyrococcus yayanosii CH1]
gi|334899955|gb|AEH24223.1| DNA helicase [Pyrococcus yayanosii CH1]
Length = 656
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/224 (34%), Positives = 125/224 (55%), Gaps = 28/224 (12%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLP-DEVYYKDP--------VLRP---Y 49
+L++QYRM+ + FPSR FY+G++ ESV N+ ++ K+P +LRP
Sbjct: 442 MLNIQYRMNERLMAFPSREFYEGKIIADESVKNITLADLGVKEPGFSEPWAEILRPENVL 501
Query: 50 VFFDVIHGR---ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKL 106
VF D H E R GS S +N EAK + L + MG+ +G+ITPY
Sbjct: 502 VFIDTAHRHDKWERQRRGSESRENPLEAKIVATIVGKLIE----MGVKPEWIGVITPYDD 557
Query: 107 QLKCLQHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMN 165
Q R++++ +D+ + TVD +QG+E++VII+S VR++ G +GF+ D+RR+N
Sbjct: 558 Q--------RDLISLNVPEDVEVKTVDGYQGREKEVIILSLVRSNERGEIGFLRDLRRLN 609
Query: 166 VALTRARRALWVMGNAGALTQSDDWAALIADSKARNCYMDMDSL 209
V+LTRA+R L ++G++ L+ + L+ K + +D L
Sbjct: 610 VSLTRAKRKLIIVGDSATLSSHPTYKRLVEFVKEKGKLVDAREL 653
>gi|389640681|ref|XP_003717973.1| regulator-nonsense transcripts 1 [Magnaporthe oryzae 70-15]
gi|351640526|gb|EHA48389.1| regulator-nonsense transcripts 1 [Magnaporthe oryzae 70-15]
gi|440471031|gb|ELQ40068.1| ATP-dependent helicase NAM7 [Magnaporthe oryzae Y34]
gi|440490268|gb|ELQ69843.1| ATP-dependent helicase NAM7 [Magnaporthe oryzae P131]
Length = 1105
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/208 (35%), Positives = 117/208 (56%), Gaps = 10/208 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVL-RPYVFFDVIHGRES 60
L+VQYRMHP + +FPS FY+G L + ++ L +V + PV P +F+ + G E
Sbjct: 679 LNVQYRMHPCLSEFPSNMFYEGSLQNGVTIQQRLRRDVDFPWPVADMPMMFWSNL-GNEE 737
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV-- 118
SY N EA E L G+ +G++TPY+ Q + +N
Sbjct: 738 ISASGTSYLNRTEASN----VEKLVTRFFKAGVKPGDIGVVTPYEGQRSYIVSTMQNTGT 793
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRALWV 177
E K++ + +VDAFQG+E+D I++SCVR++ + G+GF++D RR+NVALTRA+ + +
Sbjct: 794 FKKESYKEVEVASVDAFQGREKDFIVLSCVRSNESQGIGFLSDPRRLNVALTRAKYGVVI 853
Query: 178 MGNAGALTQSDDWAALIADSKARNCYMD 205
+GN L++ + W L+ + R C +D
Sbjct: 854 IGNPKVLSKHELWHHLLIHFRDRKCLVD 881
>gi|86451930|gb|ABC97360.1| UPF1 [Streblomastix strix]
Length = 277
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/226 (34%), Positives = 114/226 (50%), Gaps = 31/226 (13%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSES-------VINLPDEVYYKD--PVLRPYVFFD 53
L +QYRMHP I F S FY+G L D + +I + K P P
Sbjct: 11 LQIQYRMHPEIAKFASEQFYKGLLIDGVNAEQRQYRIITKCGQQIIKQVFPWPNPKCPIM 70
Query: 54 VIHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSM---GLGKVTVGIITPYKLQLKC 110
++ + SY N EA H++K L + G+ +GIITPYKLQ+ C
Sbjct: 71 FVNSTNEEKKLGTSYLNNTEA-------NHVEKILTHLLINGVKAKDIGIITPYKLQISC 123
Query: 111 LQHEFRNV-----------LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFV 158
+ +F+ V L E +D+ + +VDAFQG+E+D II SCVR++ G+GF+
Sbjct: 124 IIDQFKRVADNSQSQNGRGLPYETYQDVQVASVDAFQGREKDFIIFSCVRSNERKGIGFL 183
Query: 159 ADIRRMNVALTRARRALWVMGNAGALTQSDDWAALIADSKARNCYM 204
D RR+NVA+TRAR L ++GNA L W L+ + ++C +
Sbjct: 184 NDPRRLNVAITRARYGLIIIGNAKCLFSYPLWNNLLVHLQEKHCII 229
>gi|346970142|gb|EGY13594.1| ATP-dependent helicase NAM7 [Verticillium dahliae VdLs.17]
Length = 1099
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/207 (35%), Positives = 110/207 (53%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSES-VINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
L+ QYRMHP + +FPS FY G L + + L +V + PV + F G E
Sbjct: 677 LNTQYRMHPCLSEFPSNMFYDGSLQNGVTHAQRLRRDVDFPWPVADTPMMFWSNLGNEEI 736
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV--L 119
SY N EA E + G+ +G+ITPY+ Q + +N
Sbjct: 737 SASGTSYLNRTEASN----VEKVVTRFFKAGVKPQDIGVITPYEGQRSYIVSTMQNTGTF 792
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRALWVM 178
E K++ + +VDAFQG+E+D I++SCVR+S N G+GF++D RR+NV LTRA+ L ++
Sbjct: 793 KKESYKEVEVASVDAFQGREKDFIVLSCVRSSDNQGIGFLSDPRRLNVGLTRAKYGLVIL 852
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN L++ + W L+ K R C ++
Sbjct: 853 GNPKVLSKHELWHHLLVHFKDRKCLVE 879
>gi|336263126|ref|XP_003346344.1| hypothetical protein SMAC_07821 [Sordaria macrospora k-hell]
gi|380091672|emb|CCC10804.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1093
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 111/207 (53%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + +FPS FY G L + + L +V + PV + F G E
Sbjct: 683 LKVQYRMHPCLSEFPSNMFYDGSLQNGVTAAERLRKDVDFPWPVPETPMMFWSNLGNEEI 742
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV--L 119
SY N EA E + G+ +G+ITPY+ Q + + +N
Sbjct: 743 SASGTSYLNRTEAAN----VEKIVTRFFKAGVKPADIGVITPYEGQRSYIVNTMQNTGTF 798
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRALWVM 178
E +++ + +VDAFQG+E++ I++SCVR++ N G+GF++D RR+NVALTRA+ L ++
Sbjct: 799 KKESYREVEVASVDAFQGREKEFIVLSCVRSNENQGIGFLSDPRRLNVALTRAKYGLVII 858
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN L + + W L+ K + C ++
Sbjct: 859 GNPKVLCKHELWHHLLVHFKDKKCLVE 885
>gi|429961769|gb|ELA41314.1| hypothetical protein VICG_01687 [Vittaforma corneae ATCC 50505]
Length = 575
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/198 (39%), Positives = 109/198 (55%), Gaps = 26/198 (13%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRL---TDSESVINLPDEVYYKDPVLRPYVFFDVIHGR 58
LLSVQYRMHP + FPS +FY G L T + V++LP+ FF V G+
Sbjct: 365 LLSVQYRMHPDLCAFPSEYFYNGLLKSGTSTSKVLDLPNN------------FFYVCDGK 412
Query: 59 ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLK-CLQHEFRN 117
E S+ N EA + E++ + L G+ + +G+ITPY+ Q L F N
Sbjct: 413 EEISQSRTSFFNKSEA----VIVENIIRFLFKNGVLEQQIGVITPYEGQRSYILGQIFGN 468
Query: 118 VLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASN-HGVGFVADIRRMNVALTRARRALW 176
E +L I VD FQG+E+D II+S VR++ GVGFV D RRMNV LTRA+ L
Sbjct: 469 -----EAGNLEIKNVDGFQGREKDFIIVSLVRSNIFQGVGFVGDKRRMNVTLTRAKHGLI 523
Query: 177 VMGNAGALTQSDDWAALI 194
++GN L +++ WA L+
Sbjct: 524 IIGNPFTLYKNEMWADLL 541
>gi|448086434|ref|XP_004196100.1| Piso0_005544 [Millerozyma farinosa CBS 7064]
gi|359377522|emb|CCE85905.1| Piso0_005544 [Millerozyma farinosa CBS 7064]
Length = 958
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/209 (37%), Positives = 113/209 (54%), Gaps = 10/209 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLRPYVFFDVIHGRESH 61
L VQYRM+P + +FPS FY+G L + + L + PV+ + F +GRE
Sbjct: 634 LEVQYRMNPCLSEFPSNMFYEGSLQNGVTTKERLIKNASFPWPVIDHPMMFWANYGREEI 693
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
G S+ N EA E + L G+G +G+ITPY+ Q L
Sbjct: 694 SGSGHSFLNRVEAMN----VEKIITRLFKDGIGPEQIGVITPYEGQRAYLIQYMSINSTL 749
Query: 122 EEGKDLY----INTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALW 176
E KD Y I +VDAFQG+E+D II+SCVRA++ +GF++D RR+NVALTRA+ L
Sbjct: 750 TEMKDRYLEVEITSVDAFQGREKDFIILSCVRANDQQTIGFLSDSRRLNVALTRAKYGLV 809
Query: 177 VMGNAGALTQSDDWAALIADSKARNCYMD 205
++GN AL ++ W L+ + + C +D
Sbjct: 810 ILGNPRALCRNTLWNHLLVHFREKGCLVD 838
>gi|448081930|ref|XP_004195009.1| Piso0_005544 [Millerozyma farinosa CBS 7064]
gi|359376431|emb|CCE87013.1| Piso0_005544 [Millerozyma farinosa CBS 7064]
Length = 959
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/209 (37%), Positives = 113/209 (54%), Gaps = 10/209 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLRPYVFFDVIHGRESH 61
L VQYRM+P + +FPS FY+G L + + L + PV+ + F +GRE
Sbjct: 634 LEVQYRMNPCLSEFPSNMFYEGSLQNGVTTKERLIKNASFPWPVIDHPMMFWANYGREEI 693
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
G S+ N EA E + L G+G +G+ITPY+ Q L
Sbjct: 694 SGSGHSFLNRVEAMN----VEKIITRLFKDGIGPEQIGVITPYEGQRAYLIQYMSINSTL 749
Query: 122 EEGKDLY----INTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALW 176
E KD Y I +VDAFQG+E+D II+SCVRA++ +GF++D RR+NVALTRA+ L
Sbjct: 750 TEMKDRYLEVEITSVDAFQGREKDFIILSCVRANDQQTIGFLSDSRRLNVALTRAKYGLV 809
Query: 177 VMGNAGALTQSDDWAALIADSKARNCYMD 205
++GN AL ++ W L+ + + C +D
Sbjct: 810 ILGNPRALCRNTLWNHLLVHFREKGCLVD 838
>gi|254167906|ref|ZP_04874755.1| DNA helicase, putative [Aciduliprofundum boonei T469]
gi|289596630|ref|YP_003483326.1| DNA helicase [Aciduliprofundum boonei T469]
gi|197623197|gb|EDY35763.1| DNA helicase, putative [Aciduliprofundum boonei T469]
gi|289534417|gb|ADD08764.1| DNA helicase [Aciduliprofundum boonei T469]
Length = 655
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 125/223 (56%), Gaps = 32/223 (14%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY------YKDP---VLRP--- 48
+ L VQYRM+ I FPS+ FY+ L SV N E ++P + P
Sbjct: 446 ITLRVQYRMNEKIMKFPSKLFYKDLLIAHPSVKNRSIEDLGVSAENLEEPMRSICEPQSI 505
Query: 49 YVFFDVIHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKT---LKSMGLGKVTVGIITPYK 105
VF D+ + +E RGGS SY N EA E ++ T L +GL + +GIITPY
Sbjct: 506 IVFLDMQNCKEEKRGGSTSYYNECEA-------ETVKDTVDCLLKIGLKEKHIGIITPYD 558
Query: 106 LQLKCLQHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRM 164
Q+ L+ +D+ I +VD FQG+E+DVII+S VR+++ G +GF+ D+RR+
Sbjct: 559 DQVDLLRSMI---------EDIEIKSVDGFQGREKDVIIISFVRSNDKGDIGFLDDLRRL 609
Query: 165 NVALTRARRALWVMGNAGALTQSDDWAALIADSKARNCYMDMD 207
NVA+TRA+R L ++GNA L+ ++ + LI +++ ++ +D
Sbjct: 610 NVAITRAKRKLIMLGNAKTLSSNEVYTKLIDYTRSEGKFLKID 652
>gi|400597184|gb|EJP64919.1| Regulator of nonsense transcripts 1 [Beauveria bassiana ARSEF 2860]
Length = 1083
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 119/210 (56%), Gaps = 10/210 (4%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLR-PYVFFDVIHGR 58
+LL+ QYRMHP + +FPS FY G L + + + +V + PV P +F+ I
Sbjct: 672 ILLNTQYRMHPCLSEFPSNMFYDGSLQNGVTQEQRIRKDVDFPWPVAEMPMMFWSNIGNE 731
Query: 59 ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV 118
E G+ SY N EA E + G+ +G+ITPY+ Q + +N
Sbjct: 732 EISTSGT-SYLNRTEASN----VEKIVTRFFKAGVKPSEIGVITPYEGQRSYIVTTMQNA 786
Query: 119 LNSEEG--KDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRAL 175
S++ K + + +VDAFQG+E+D I++SCVR++ N G+GF++D RR+NVALTRA+ +
Sbjct: 787 GTSKKEYYKSVEVASVDAFQGREKDFIVLSCVRSNENQGIGFLSDPRRLNVALTRAKYGV 846
Query: 176 WVMGNAGALTQSDDWAALIADSKARNCYMD 205
++GN L++ + W L+ + R C+++
Sbjct: 847 VILGNPRVLSKHELWYNLLTHFRDRRCFVE 876
>gi|296816783|ref|XP_002848728.1| ATP-dependent helicase NAM7 [Arthroderma otae CBS 113480]
gi|238839181|gb|EEQ28843.1| ATP-dependent helicase NAM7 [Arthroderma otae CBS 113480]
Length = 1088
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 75/208 (36%), Positives = 115/208 (55%), Gaps = 10/208 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVL-RPYVFFDVIHGRES 60
L+VQYRMHP + F S FY+G L + S + L V + PV +P +F+ + G E
Sbjct: 661 LNVQYRMHPCLSQFSSNMFYEGSLQNGVSSEDRLLKNVDFPWPVADKPMMFWSNL-GNEE 719
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCL--QHEFRNV 118
SY N EA E + G+ +GIITPY+ Q + +
Sbjct: 720 ISASGTSYLNRTEAAN----VEKIVTRFFKAGVKPSGIGIITPYEGQRSYVVSSMQLTGT 775
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWV 177
E K++ + +VDAFQG+E+D I++SCVR+++H G+GF++D RR+NVALTRA+ L +
Sbjct: 776 FKKESYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLVI 835
Query: 178 MGNAGALTQSDDWAALIADSKARNCYMD 205
+GN L++ W L+ K +NC ++
Sbjct: 836 LGNPKVLSKHPLWNYLLRHFKEQNCLVE 863
>gi|406864055|gb|EKD17101.1| RNA helicase [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
Length = 1098
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 73/207 (35%), Positives = 115/207 (55%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + +FPS FY+G L + +++ + +V + PV + F G E
Sbjct: 679 LDVQYRMHPCLSEFPSNMFYEGSLQNGVTMVQRIRCDVDFPWPVSDTPMMFWSNLGNEEI 738
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV--L 119
SY N EA E + G+ +G+ITPY+ Q + +N
Sbjct: 739 SASGTSYLNRTEASN----VEKIVTRFFKAGVQPADIGVITPYEGQRSYVVSSMQNTGTF 794
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
E K++ + +VDAFQG+E+D I++SCVR+++H G+GF++D RR+NVALTRA+ L ++
Sbjct: 795 KKENYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLVIL 854
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN L++ W L+ K R+C ++
Sbjct: 855 GNPKVLSKHPLWHHLLLHFKERDCLVE 881
>gi|190349039|gb|EDK41614.2| hypothetical protein PGUG_05712 [Meyerozyma guilliermondii ATCC
6260]
Length = 949
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 84/238 (35%), Positives = 129/238 (54%), Gaps = 17/238 (7%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTD--SESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
L VQYRMHP + +FPS FY+G L + S +E + PVL + F +GRE
Sbjct: 629 LEVQYRMHPCLSEFPSNMFYEGSLQNGVSSESRTFKNETF-PWPVLDFPMMFWANYGREE 687
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLK-CLQHEFRN-- 117
SY N EA E + L G+ +G++TPY+ Q LQH
Sbjct: 688 ISASGYSYLNRVEAMN----VEKIITRLFKQGVKAEQIGVVTPYEGQRAYILQHMSLTGS 743
Query: 118 -VLNSEEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRAL 175
V E+ ++ + +VDAFQG+E+D II+SCVRA+ HG+GF++D RR+NVALTRA+ L
Sbjct: 744 LVDKREQYSEVEVASVDAFQGREKDYIILSCVRANETHGIGFLSDSRRLNVALTRAKYGL 803
Query: 176 WVMGNAGALTQSDDWAALIADSKARNCYMD--MDSLPKEFSVALAAKAPG-YGPLQGK 230
++GN L+++ W L+ + + C ++ +D+L + S+ + P P+Q +
Sbjct: 804 VIVGNPRCLSKNKLWNHLLIHFREKGCLVEGPLDNL--QLSMVQLRQTPASIMPMQTR 859
>gi|443896129|dbj|GAC73473.1| RNA helicase nonsense mRNA reducing factor [Pseudozyma antarctica
T-34]
Length = 1090
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 75/208 (36%), Positives = 114/208 (54%), Gaps = 10/208 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLR-PYVFFDVIHGRES 60
L +QYRMHP + +FPS FY+G L + + L +V + PV P +FF + G+E
Sbjct: 712 LEIQYRMHPCLSEFPSNMFYEGTLQNGITAQERLRAKVDFPWPVPSLPMMFFQNL-GQEE 770
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCL--QHEFRNV 118
S+ N EA E + G+ +GI+TPY+ Q + +
Sbjct: 771 ISSSGTSFLNRTEASN----VEKIVTRFFKAGVEPWQIGIVTPYEGQRSYIVNHMQLHGS 826
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWV 177
L E K++ + +VDAFQG+E+D II+SCVR++ H G+GF++D RR+NVALTRAR L +
Sbjct: 827 LKKELYKEVEVASVDAFQGREKDYIILSCVRSNEHQGIGFLSDPRRLNVALTRARFGLVI 886
Query: 178 MGNAGALTQSDDWAALIADSKARNCYMD 205
+GN L + W L+ K + C ++
Sbjct: 887 LGNPKVLNKHPLWHYLLVHYKEKGCLVE 914
>gi|296109905|ref|YP_003616854.1| DNA helicase [methanocaldococcus infernus ME]
gi|295434719|gb|ADG13890.1| DNA helicase [Methanocaldococcus infernus ME]
Length = 639
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 112/201 (55%), Gaps = 23/201 (11%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-----LPDEVYYKDPVLR---PYVFFD 53
+L +QYRM+ I +FP+R FY+ +L +ESV N L EV +D + P FF
Sbjct: 449 ILEIQYRMNEKIMEFPNRMFYENKLKAAESVKNITLMDLVKEVDEEDKDIINKIPVQFFH 508
Query: 54 VIHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH 113
V G E S SY N +EAK + + +K + K+ V +ITPY Q++ L+
Sbjct: 509 V-DGEEKRDKDSPSYYNEEEAK-------KVLEVVKKLVKYKIPVSVITPYDAQVRLLRR 560
Query: 114 EFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARR 173
F EEG D+ +NTVD FQG+E + I++S VR N GF+ D RR+NVA+TRA+R
Sbjct: 561 MF-----EEEGLDVEVNTVDGFQGRENEAIVISFVRTKNF--GFLKDYRRLNVAITRAKR 613
Query: 174 ALWVMGNAGALTQSDDWAALI 194
L ++GN L + + ++
Sbjct: 614 KLILIGNENLLKKDTIYNEML 634
>gi|254585189|ref|XP_002498162.1| ZYRO0G03740p [Zygosaccharomyces rouxii]
gi|238941056|emb|CAR29229.1| ZYRO0G03740p [Zygosaccharomyces rouxii]
Length = 944
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 76/210 (36%), Positives = 117/210 (55%), Gaps = 14/210 (6%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVI--NLPDEVYYKDPVLRPYVFFDVIHGRES 60
L VQYRM+PH+ +FPS FY+G L + ++ +P+ + P+ + F +GRE
Sbjct: 631 LEVQYRMNPHLSEFPSNMFYEGSLQNGVTIEQRTVPNSTF-PWPIHEVPMMFWANYGREE 689
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
SY N EA C E + L G+ +G+ITPY+ Q + + +N
Sbjct: 690 ISANGTSYLNRIEAMN--C--ERIITRLFKDGVKPEQIGVITPYEGQRAYILQYMQ--MN 743
Query: 121 SEEGKDLYIN----TVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRAL 175
DLY+N +VDAFQG+E+D II+SCVRA++ +GF++D RRMNV LTRA+ L
Sbjct: 744 GSLDTDLYVNVEVASVDAFQGREKDYIILSCVRANDQQSIGFLSDSRRMNVGLTRAKYGL 803
Query: 176 WVMGNAGALTQSDDWAALIADSKARNCYMD 205
++GN AL+ + W L+ + + C ++
Sbjct: 804 VILGNPRALSTNVLWNNLLIHFREKGCLVE 833
>gi|296423838|ref|XP_002841459.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637699|emb|CAZ85650.1| unnamed protein product [Tuber melanosporum]
Length = 1105
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 113/207 (54%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLRPYVFFDVIHGRESH 61
L+VQYRMHP + +FPS FY+G L + + L V + PV + F G E
Sbjct: 664 LNVQYRMHPCLSEFPSNMFYEGSLQNGVTTQERLRRNVDFPWPVADTPMMFWSNLGNEEI 723
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRN--VL 119
SY N EA C E + G+ +GIITPY+ Q + + L
Sbjct: 724 SASGTSYLNRTEAS--AC--EKIITRFFKAGVLPSQIGIITPYEGQRSYIVSSMQTNGAL 779
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
E K++ + +VDAFQG+E+D I++SCVR+++H G+GF+ D RR+NVALTRA+ + ++
Sbjct: 780 RKELYKEIEVASVDAFQGREKDYIVLSCVRSNDHQGIGFLNDPRRLNVALTRAKFGVVIL 839
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN L++ W L+ K +NC ++
Sbjct: 840 GNPKVLSKHPLWHYLLLHYKDKNCLVE 866
>gi|11498984|ref|NP_070217.1| DNA helicase [Archaeoglobus fulgidus DSM 4304]
gi|2649188|gb|AAB89860.1| DNA helicase, putative [Archaeoglobus fulgidus DSM 4304]
Length = 648
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 80/218 (36%), Positives = 119/218 (54%), Gaps = 26/218 (11%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSES--VINLPDEVYYKDPVLR------PYVFFD 53
LL+VQYRM+ + +FPSR FY GR+ ES I L + LR P VF D
Sbjct: 434 LLNVQYRMNEKLMEFPSREFYGGRIVAHESCTAIALSQIAKREAEKLREILGDEPLVFID 493
Query: 54 VIHGR---ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKC 110
+ E S S N EA+ + L K MGL K +G+ITPY Q+
Sbjct: 494 TSKCKNRWEGKLADSTSRYNRLEAEIVTEIVTELLK----MGLKKEQIGVITPYDDQVDL 549
Query: 111 LQHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALT 169
L+ E D+ +++VD FQG+E++VII+S VR++ +GF+ D+RR+NV+LT
Sbjct: 550 LR----------EKVDVEVSSVDGFQGREKEVIIISFVRSNRKREIGFLDDLRRLNVSLT 599
Query: 170 RARRALWVMGNAGALTQSDDWAALIADSKARNCYMDMD 207
RARR L ++G++ L+ + +A LI K + Y+++D
Sbjct: 600 RARRKLIMVGDSETLSVNGTYARLIDHVKRKGVYVELD 637
>gi|354544687|emb|CCE41413.1| hypothetical protein CPAR2_304020 [Candida parapsilosis]
Length = 1049
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 81/215 (37%), Positives = 121/215 (56%), Gaps = 12/215 (5%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + +FPS FY+G L D + + L + + PV+ + F +GRE
Sbjct: 680 LEVQYRMHPCLSEFPSNMFYEGSLQDGVTNADRLVADSSFPWPVVDTPMMFWANYGREEL 739
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
SY N EA E + L G+ +G+ITPY+ Q L + L
Sbjct: 740 SSSGNSYLNRVEAMN----VERIITRLFKDGIKPEQIGVITPYEGQRAYLVQFMSMNSTL 795
Query: 120 NS--EEGKDLYINTVDAFQGQERDVIIMSCVRASN-HGVGFVADIRRMNVALTRARRALW 176
S +E ++ I +VDAFQG+E+D II+SCVRA++ +GF++D RR+NVALTRA+ L
Sbjct: 796 LSKRDEYLEVEITSVDAFQGREKDFIILSCVRANDSQSIGFLSDPRRLNVALTRAKYGLL 855
Query: 177 VMGNAGALTQSDDWAALIADSKARNCYMD--MDSL 209
V+GN AL+++ W L+ + + C +D +D+L
Sbjct: 856 VLGNPRALSRNRLWNHLLVHFREKGCLVDGPLDNL 890
>gi|395333828|gb|EJF66205.1| ATP dependent helicase [Dichomitus squalens LYAD-421 SS1]
Length = 1060
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 74/207 (35%), Positives = 117/207 (56%), Gaps = 9/207 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + +FPS FY+G L + + L V + PV +FF G+E
Sbjct: 655 LQVQYRMHPCLSEFPSNMFYEGTLQNGVTAPERLRKNVDFPWPVPDTPMFFYQNLGQEEI 714
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
S+ N + + + + K KS G+ +G+ITPY+ Q + + +F L
Sbjct: 715 SSSGTSFLN----RRASNVEKIVTKFFKS-GVVPSQIGVITPYEGQRSYIVNYMQFNGSL 769
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+ K++ + +VDAFQG+E+D II+SCVR++ H G+GF+ D RR+NVALTRA+ + ++
Sbjct: 770 KKDLYKEIEVASVDAFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAKYGVVIL 829
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN L++ W L+ K +NC ++
Sbjct: 830 GNPKVLSKHPLWHYLLTHYKEKNCLVE 856
>gi|240102675|ref|YP_002958984.1| UvrD type DNA helicase [Thermococcus gammatolerans EJ3]
gi|239910229|gb|ACS33120.1| DNA helicase, putative [Thermococcus gammatolerans EJ3]
Length = 660
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 79/225 (35%), Positives = 128/225 (56%), Gaps = 32/225 (14%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESV---------INLP--DEVYYKDPVLRP-- 48
+L+VQYRM+ + +FPSR FY GR+ ESV + LP D+V+ + VL+P
Sbjct: 447 MLTVQYRMNERLMEFPSREFYNGRIKADESVRNITLADLGVELPKGDDVWAE--VLKPEN 504
Query: 49 -YVFFDVIHGR---ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPY 104
VF D E R GS S +N EA+ L E + L +G+ VG+ITPY
Sbjct: 505 VLVFVDTAKREDRFERQRYGSESRENPLEAR----LVEEAVEGLLKLGIKPEWVGVITPY 560
Query: 105 KLQLKCLQHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRR 163
Q R++++S +++ + TVD +QG+E++VI++S VR++ G +GF+ D+RR
Sbjct: 561 DDQ--------RDLISSLLPEEIEVKTVDGYQGREKEVIVLSFVRSNRKGELGFLKDLRR 612
Query: 164 MNVALTRARRALWVMGNAGALTQSDDWAALIADSKARNCYMDMDS 208
+NV+LTRA+R L ++G++ L+ + L+ + R Y+ + S
Sbjct: 613 LNVSLTRAKRKLILIGDSSTLSSHPTYKRLVEFVRKRETYVSLKS 657
>gi|340501324|gb|EGR28123.1| tRNA-splicing endonuclease positive effector-related, putative
[Ichthyophthirius multifiliis]
Length = 323
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 83/259 (32%), Positives = 129/259 (49%), Gaps = 33/259 (12%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPY--VFFDVIHGRE 59
L+ QYRM P++ FPS+ FY+G L DS+ V P +K + Y F D+ +E
Sbjct: 38 FLNKQYRMQPYLSLFPSQIFYKGNLKDSKKVQKRP--FLFKSFLNENYSHFFIDIQFSKE 95
Query: 60 SHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGL--GKVTVGIITPYKLQLKCLQHEFRN 117
S + N++EA + L + L+ +T+G+I PY Q++CL++ FR
Sbjct: 96 IQNKSS--FFNLEEAYLCISLVSEIISLLEKNQFPSNNLTIGVIAPYSQQVQCLKNLFR- 152
Query: 118 VLNSEEG------KDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRA 171
++ K + I T+D+FQGQE+D+II S VR S +GF+ D +R+NVALTRA
Sbjct: 153 ----QQNWYLIYRKIIKIKTIDSFQGQEKDIIIFSTVRTSR--IGFLQDEKRLNVALTRA 206
Query: 172 RRALWVMGNAGALTQSDDWAALIADSKARNCY---MDMDSLPKEFSVALAAKAPGYGPLQ 228
+ L+V+GN+ L + W + I + Y ++ D+L G LQ
Sbjct: 207 KYCLYVVGNSNCLNKDFFWDSFIGFMSEQGKYGQILEKDNL---------LSNTGALILQ 257
Query: 229 GKIPHNARGLRSAGQRHRS 247
G I R L + +S
Sbjct: 258 GLISKGIRSLYKKKNKDKS 276
>gi|340914927|gb|EGS18268.1| eliminates the production of nonsense-containing-like protein
[Chaetomium thermophilum var. thermophilum DSM 1495]
Length = 1098
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 74/208 (35%), Positives = 115/208 (55%), Gaps = 10/208 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSES-VINLPDEVYYKDPVL-RPYVFFDVIHGRES 60
L+VQYRMHP + +FPS FY+G L + + + +V + PV P +F+ + G E
Sbjct: 684 LNVQYRMHPCLSEFPSNMFYEGSLQNGVTHAERIRKDVDFPWPVADMPMMFWSNL-GSEE 742
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV-- 118
SY N EA E + G+ +G+ITPY+ Q + +N
Sbjct: 743 ISASGTSYLNRTEAAN----VEKVVTRFFKAGVKPSDIGVITPYEGQRSYIVSTMQNTGT 798
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRALWV 177
E K++ + +VDAFQG+E+D I++SCVR++ N G+GF++D RR+NVALTRA+ L +
Sbjct: 799 FKKEWYKEVEVASVDAFQGREKDYIVLSCVRSNDNQGIGFLSDPRRLNVALTRAKYGLVI 858
Query: 178 MGNAGALTQSDDWAALIADSKARNCYMD 205
+GN L + + W L+ K R C ++
Sbjct: 859 IGNPKVLAKHELWHHLLVHFKDRKCLVE 886
>gi|430813983|emb|CCJ28727.1| unnamed protein product [Pneumocystis jirovecii]
Length = 1045
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 76/207 (36%), Positives = 115/207 (55%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLRPYVFFDVIHGRESH 61
L+VQYRMHP + +FPS FY+G L + S L V + PV + F + G+E
Sbjct: 673 LTVQYRMHPCLSEFPSNMFYEGTLQNGVSKNERLRKNVDFPWPVNDTPMMFHMSLGQEEI 732
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV--L 119
SY N EA C E + G+ +GIITPY+ Q + + L
Sbjct: 733 SSSGTSYLNRTEA--SNC--EKIVVKFFKAGVKFSQIGIITPYEGQRSYIVSSMQQSGSL 788
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+ K++ + +VDAFQG+E+D II+SCVR++ H G+GF++D RR+NVALTRA+ + ++
Sbjct: 789 RKDLYKEIEVASVDAFQGREKDYIIVSCVRSNEHQGIGFLSDPRRLNVALTRAKYGVVIL 848
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN L++ W L+ K +NC ++
Sbjct: 849 GNPKVLSKHPLWYHLLLHYKEKNCLVE 875
>gi|301613470|ref|XP_002936221.1| PREDICTED: probable helicase senataxin [Xenopus (Silurana)
tropicalis]
Length = 2535
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 74/204 (36%), Positives = 114/204 (55%), Gaps = 18/204 (8%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY-YKDPVLRPYVFFDVIHGRESH 61
L+VQYRMHP I FPS +FY+ L + +EV D +PY+ FDV G E
Sbjct: 2152 LTVQYRMHPDICLFPSHYFYKRMLKTDRAT----EEVRCSSDWPFQPYMVFDVADGFEQK 2207
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
S + N E K V L + ++ K +G+ITPY+ Q + E R
Sbjct: 2208 ERES--FCNPQEIKVAVALIKLIKSRKKEFCFR--NIGVITPYRAQKMRIIEELRRAF-- 2261
Query: 122 EEGKDLY---INTVDAFQGQERDVIIMSCVRASNH--GVGFVADIRRMNVALTRARRALW 176
G D+ ++TVD FQG+++D II++CVRA++ G+GF+A +R+NV +TRA+ +L+
Sbjct: 2262 --GNDIRPGEVDTVDGFQGRQKDCIIVTCVRANSTQGGIGFLASRQRLNVTITRAKFSLF 2319
Query: 177 VMGNAGALTQSDDWAALIADSKAR 200
++G+ L ++ DW LI D++ R
Sbjct: 2320 ILGSLRTLMENKDWNHLIQDAQRR 2343
>gi|241955273|ref|XP_002420357.1| ATP-dependent RNA helicase, putative; atp-dependent helicase, SFI
superfamily, putative [Candida dubliniensis CD36]
gi|223643699|emb|CAX41433.1| ATP-dependent RNA helicase, putative [Candida dubliniensis CD36]
Length = 1016
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 83/217 (38%), Positives = 124/217 (57%), Gaps = 16/217 (7%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDS-ESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + +FPS FY+G L + S L +E + PV+ + F +GRE
Sbjct: 669 LEVQYRMHPCLSEFPSNMFYEGSLQNGVTSDDRLIEESTFPWPVIDTPMMFWANYGREEL 728
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
SY N EA E + L G+ +G+ITPY+ Q L +F +V NS
Sbjct: 729 SASGNSYLNRVEAMN----VEKIITKLFKDGIKPEQIGVITPYEGQRAYLV-QFMSV-NS 782
Query: 122 E--EGKDLYIN----TVDAFQGQERDVIIMSCVRASN-HGVGFVADIRRMNVALTRARRA 174
+ +D Y+N +VDAFQG+E+D II+SCVRA++ +GF++D RR+NVALTRA+
Sbjct: 783 TLLDKRDQYLNVEITSVDAFQGREKDFIILSCVRANDSQSIGFLSDPRRLNVALTRAKYG 842
Query: 175 LWVMGNAGALTQSDDWAALIADSKARNCYMD--MDSL 209
L ++GN +L ++ W L+ + + C +D +D+L
Sbjct: 843 LVILGNPRSLCRNRLWNHLLIHFREKGCLVDGPLDNL 879
>gi|302422300|ref|XP_003008980.1| ATP-dependent helicase NAM7 [Verticillium albo-atrum VaMs.102]
gi|261352126|gb|EEY14554.1| ATP-dependent helicase NAM7 [Verticillium albo-atrum VaMs.102]
Length = 1041
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 73/207 (35%), Positives = 110/207 (53%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSES-VINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
L+ QYRMHP + +FPS FY G L + + L +V + PV + F G E
Sbjct: 647 LNTQYRMHPCLSEFPSNMFYDGSLQNGVTHAQRLRRDVDFPWPVADTPMMFWSNLGNEEI 706
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV--L 119
SY N EA E + G+ +G+ITPY+ Q + +N
Sbjct: 707 SASGTSYLNRTEASN----VEKVVTRFFKAGVKPQDIGVITPYEGQRSYIVSTMQNTGTF 762
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRALWVM 178
E K++ + +VDAFQG+E+D I++SCVR+S N G+GF++D RR+NV LTRA+ L ++
Sbjct: 763 KKESYKEVEVASVDAFQGREKDFIVLSCVRSSDNQGIGFLSDPRRLNVGLTRAKYGLVIL 822
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN L++ + W L+ K R C ++
Sbjct: 823 GNPKVLSKHELWHHLLVHFKDRKCLVE 849
>gi|193614406|ref|XP_001947281.1| PREDICTED: regulator of nonsense transcripts 1-like [Acyrthosiphon
pisum]
Length = 1118
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 76/207 (36%), Positives = 112/207 (54%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLP-DEVYYKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + F S FY+G L + + ++ + PV + F G E
Sbjct: 690 LEVQYRMHPELSRFSSNFFYEGSLQNGVCADDRKLRKIEFPWPVADEPMLFYATLGHEEI 749
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
G SY N EA EH+ G+ +GIITPY+ Q L +++ L
Sbjct: 750 AGSGTSYLNRTEAAN----VEHIATRFLRCGVRPDQIGIITPYEGQRAYLVQYMQYQAPL 805
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRALWVM 178
++ + + I +VDAFQG+E+D IIMSCVR++ N G+GF+ D RR+NVALTRA+ L ++
Sbjct: 806 PAKLYQKIEIASVDAFQGREKDFIIMSCVRSNENQGIGFLNDPRRLNVALTRAKYGLLIV 865
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN L++ W L+ KA+N ++
Sbjct: 866 GNPKVLSKKQLWNHLLNYYKAKNVLVE 892
>gi|326436738|gb|EGD82308.1| hypothetical protein PTSG_02976 [Salpingoeca sp. ATCC 50818]
Length = 2425
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 75/205 (36%), Positives = 114/205 (55%), Gaps = 12/205 (5%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
+L QYRMHP I +FP+ FY+ +L + +V+ ++ L Y FFDV G E
Sbjct: 1958 MLREQYRMHPEICEFPNIMFYEQKLLTAGAVLARKPAPWHD--ALGAYRFFDVSWG-EQK 2014
Query: 62 RGGSVSYQNVDEA-KFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
RGG S+ NV+EA ++ Q GK+ V +TPY Q +C++ E
Sbjct: 2015 RGGGNSFCNVEEAITVARIIFLIAQAAPAEPLRGKIAV--VTPYTHQRQCIKGELARWFG 2072
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGN 180
+ ++TVDA+QGQE DV++ SCVR +GF+ +RMNVALTRAR + +++GN
Sbjct: 2073 PAVADTISVDTVDAYQGQESDVVVFSCVRTRQ--LGFLTQEKRMNVALTRARLSCYIVGN 2130
Query: 181 AGALTQSDD----WAALIADSKARN 201
A L Q + W+ L+A+++ R+
Sbjct: 2131 AYNLRQFNRETLMWSRLVANAQQRS 2155
>gi|429860740|gb|ELA35464.1| ATP-dependent helicase nam7 [Colletotrichum gloeosporioides Nara
gc5]
Length = 1088
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 74/208 (35%), Positives = 115/208 (55%), Gaps = 10/208 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSES-VINLPDEVYYKDPVL-RPYVFFDVIHGRES 60
L++QYRMHP + +FPS FY G L + + L +V + PV P +F+ + G E
Sbjct: 676 LNIQYRMHPCLSEFPSNMFYDGSLQNGVTHRERLRRDVDFPWPVADMPMMFWSNL-GNEE 734
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV-- 118
SY N EA E + G+ +G+ITPY+ Q + +N
Sbjct: 735 ISASGTSYLNRTEASN----VEKVVTRFFKAGVKPGDIGVITPYEGQRSYIVSTMQNTGT 790
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRALWV 177
E K++ + +VDAFQG+E+D I++SCVR++ N G+GF++D RR+NVALTRA+ L +
Sbjct: 791 FKKESYKEVEVASVDAFQGREKDFIVLSCVRSNDNQGIGFLSDPRRLNVALTRAKYGLVI 850
Query: 178 MGNAGALTQSDDWAALIADSKARNCYMD 205
+GN L++ + W L+ K R C ++
Sbjct: 851 IGNPKVLSKHELWHHLLVHFKERKCLVE 878
>gi|156096655|ref|XP_001614361.1| regulator of nonsense transcripts [Plasmodium vivax Sal-1]
gi|148803235|gb|EDL44634.1| regulator of nonsense transcripts, putative [Plasmodium vivax]
Length = 1539
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 107/189 (56%), Gaps = 12/189 (6%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY-YKD---PVLRPYVFFDVIHGR 58
L VQYRMHP + +FPS FY G L + I L + Y KD P + +FF G
Sbjct: 1047 LEVQYRMHPALSEFPSYVFYDGCLQNG---ITLKEREYPLKDFPWPNPKCPMFFYNSTGL 1103
Query: 59 ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV 118
E SY N EA E L +TL S GL +G+ITPY+ Q + F+
Sbjct: 1104 EEMSASGTSYLNRAEASN----MEKLVRTLISCGLKPTQIGVITPYEGQRAYITSLFQKN 1159
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWV 177
++ + ++ + +VDAFQG+E+D I++SCVR++ G+GF+ D RR+NVALTRA+ L +
Sbjct: 1160 ISYQHSTEIEVASVDAFQGREKDFILLSCVRSNKKLGIGFLNDPRRLNVALTRAKYGLII 1219
Query: 178 MGNAGALTQ 186
GNA L++
Sbjct: 1220 CGNAKVLSR 1228
>gi|238882462|gb|EEQ46100.1| ATP-dependent helicase NAM7 [Candida albicans WO-1]
Length = 1019
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 83/217 (38%), Positives = 124/217 (57%), Gaps = 16/217 (7%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDS-ESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + +FPS FY+G L + S L +E + PV+ + F +GRE
Sbjct: 667 LEVQYRMHPCLSEFPSNMFYEGSLQNGVTSDDRLIEESTFPWPVIDTPMMFWANYGREEL 726
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
SY N EA E + L G+ +G+ITPY+ Q L +F +V NS
Sbjct: 727 SASGNSYLNRVEAMN----VEKIITKLFKDGIKPEQIGVITPYEGQRAYLV-QFMSV-NS 780
Query: 122 E--EGKDLYIN----TVDAFQGQERDVIIMSCVRASN-HGVGFVADIRRMNVALTRARRA 174
+ +D Y+N +VDAFQG+E+D II+SCVRA++ +GF++D RR+NVALTRA+
Sbjct: 781 TLLDKRDQYLNVEITSVDAFQGREKDFIILSCVRANDSQSIGFLSDPRRLNVALTRAKYG 840
Query: 175 LWVMGNAGALTQSDDWAALIADSKARNCYMD--MDSL 209
L ++GN +L ++ W L+ + + C +D +D+L
Sbjct: 841 LVILGNPRSLCRNRLWNHLLIHFREKGCLVDGPLDNL 877
>gi|68478193|ref|XP_716838.1| hypothetical protein CaO19.8554 [Candida albicans SC5314]
gi|68478314|ref|XP_716778.1| hypothetical protein CaO19.939 [Candida albicans SC5314]
gi|46438461|gb|EAK97791.1| hypothetical protein CaO19.939 [Candida albicans SC5314]
gi|46438523|gb|EAK97852.1| hypothetical protein CaO19.8554 [Candida albicans SC5314]
Length = 1019
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 83/217 (38%), Positives = 124/217 (57%), Gaps = 16/217 (7%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDS-ESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + +FPS FY+G L + S L +E + PV+ + F +GRE
Sbjct: 667 LEVQYRMHPCLSEFPSNMFYEGSLQNGVTSDDRLIEESTFPWPVIDTPMMFWANYGREEL 726
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
SY N EA E + L G+ +G+ITPY+ Q L +F +V NS
Sbjct: 727 SASGNSYLNRVEAMN----VEKIITKLFKDGIKPEQIGVITPYEGQRAYLV-QFMSV-NS 780
Query: 122 E--EGKDLYIN----TVDAFQGQERDVIIMSCVRASN-HGVGFVADIRRMNVALTRARRA 174
+ +D Y+N +VDAFQG+E+D II+SCVRA++ +GF++D RR+NVALTRA+
Sbjct: 781 TLLDKRDQYLNVEITSVDAFQGREKDFIILSCVRANDSQSIGFLSDPRRLNVALTRAKYG 840
Query: 175 LWVMGNAGALTQSDDWAALIADSKARNCYMD--MDSL 209
L ++GN +L ++ W L+ + + C +D +D+L
Sbjct: 841 LVILGNPRSLCRNRLWNHLLIHFREKGCLVDGPLDNL 877
>gi|342320526|gb|EGU12466.1| ATP dependent helicase [Rhodotorula glutinis ATCC 204091]
Length = 1086
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 74/207 (35%), Positives = 110/207 (53%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + +FPS FY+G L + + L V + P ++F G+E
Sbjct: 691 LQVQYRMHPCLSEFPSNMFYEGTLQNGVTAPERLRKNVDFPWPQPTTPMYFHQNLGQEEI 750
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
S+ N EA E + G+ +GIITPY+ Q L + L
Sbjct: 751 SSSGTSFLNRTEASN----VEKIVTRFFKAGVMPSQIGIITPYEGQRSYLVSYMQMNGSL 806
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
E K++ + +VDAFQG+E+D +IMSCVR++ H G+GF+ D RR+NVALTRA+ L ++
Sbjct: 807 KKELYKEIEVASVDAFQGREKDYVIMSCVRSNEHQGIGFLNDPRRLNVALTRAKYGLVIL 866
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN L++ W L+ K + C ++
Sbjct: 867 GNPKVLSKHALWHYLLTHYKEKKCLVE 893
>gi|258570655|ref|XP_002544131.1| ATP-dependent helicase NAM7 [Uncinocarpus reesii 1704]
gi|237904401|gb|EEP78802.1| ATP-dependent helicase NAM7 [Uncinocarpus reesii 1704]
Length = 1075
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 74/208 (35%), Positives = 115/208 (55%), Gaps = 10/208 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDS-ESVINLPDEVYYKDPVL-RPYVFFDVIHGRES 60
L+VQYRMHP + FPS FY G L + S L +V + P+ +P +F+ + G E
Sbjct: 650 LNVQYRMHPCLSSFPSNMFYDGSLQNGVTSDDRLLKDVDFPWPISDKPMMFWSNL-GNEE 708
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCL--QHEFRNV 118
SY N EA E + G+ +GIITPY+ Q + +
Sbjct: 709 ISASGTSYLNRTEAAN----VEKIVTRFFKAGVKPSAIGIITPYEGQRSYVVSSMQLNGT 764
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWV 177
E K++ + +VDAFQG+E+D I++SCVR+++H G+GF++D RR+NVALTRA+ L +
Sbjct: 765 YKKEAYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLVI 824
Query: 178 MGNAGALTQSDDWAALIADSKARNCYMD 205
+GN L++ W L+ K ++C ++
Sbjct: 825 LGNPKVLSKHPLWNYLLRHFKEQDCLVE 852
>gi|66804901|ref|XP_636183.1| hypothetical protein DDB_G0289529 [Dictyostelium discoideum AX4]
gi|60464558|gb|EAL62696.1| hypothetical protein DDB_G0289529 [Dictyostelium discoideum AX4]
Length = 1677
Score = 120 bits (301), Expect = 1e-24, Method: Composition-based stats.
Identities = 75/198 (37%), Positives = 109/198 (55%), Gaps = 13/198 (6%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSE--SVINLPDEVYYKDPVLRPYVFFDVIHGRE 59
L+ QYRMHP F S FY G L D E S+ + + ++ DP P FFD+ +
Sbjct: 1395 FLNTQYRMHPVTSKFISEEFYNGTLKDGENVSIDSYNNCKFHFDPSFGPMKFFDL--PKS 1452
Query: 60 SHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVL 119
+ + S N DE L + L + K K++ GIITPYKLQ+ ++ + L
Sbjct: 1453 NQKVIKKSIMNQDEIDKVFTLIKELIE--KYPECKKLSFGIITPYKLQM----NQIKEQL 1506
Query: 120 NSEEGKDLYIN--TVDAFQGQERDVIIMSCVRA-SNHGVGFVADIRRMNVALTRARRALW 176
N E +L I+ T+D QG E+D+IIMSCVR+ G+GF++D RR+NVALTRA+ L+
Sbjct: 1507 NRSEHHNLNISVSTIDGVQGSEKDIIIMSCVRSIEKFGIGFLSDRRRINVALTRAKLGLY 1566
Query: 177 VMGNAGALTQSDDWAALI 194
V+G L + + W +
Sbjct: 1567 VIGTYKVLAKDNTWEKFL 1584
>gi|375084259|ref|ZP_09731266.1| DNA helicase, UvrD/REP family protein [Thermococcus litoralis DSM
5473]
gi|374741144|gb|EHR77575.1| DNA helicase, UvrD/REP family protein [Thermococcus litoralis DSM
5473]
Length = 656
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/221 (34%), Positives = 125/221 (56%), Gaps = 28/221 (12%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESV--INLPD----EVYYKDP---VLR---PY 49
+L +QYRM+ + +FPSR FY G++ ESV I L D E ++ +P +L+ P
Sbjct: 442 MLEIQYRMNEKLMEFPSREFYNGKIKADESVKNITLADLKVREPFFGEPWDSILKREEPL 501
Query: 50 VFFDVIHGR---ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKL 106
VF D R E R GS S +N EA L + + + L MG+ + +GIITPY
Sbjct: 502 VFVDTAERRDKWERQRKGSTSRENPLEA----LLVKEIVEKLFRMGVKEEWIGIITPYDD 557
Query: 107 QLKCLQHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMN 165
Q+ +++ S G+++ ++TVD +QG+E++VI++S VR++ +GF+ D+RR+N
Sbjct: 558 QV--------DLIRSLVGEEIEVHTVDGYQGREKEVIVLSFVRSNKEDELGFLTDLRRLN 609
Query: 166 VALTRARRALWVMGNAGALTQSDDWAALIADSKARNCYMDM 206
VALTRA+R L +G++ L+ + + K Y+ +
Sbjct: 610 VALTRAKRKLIAIGDSETLSTHPTYKRFLEFVKRHGRYIKL 650
>gi|145491971|ref|XP_001431984.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124399091|emb|CAK64586.1| unnamed protein product [Paramecium tetraurelia]
Length = 935
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/236 (36%), Positives = 127/236 (53%), Gaps = 17/236 (7%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDP-VLRPYVFFDVIHGRESH 61
L VQYRMHP + FPS FY+G L + ++ + + P +P +F +V G+E
Sbjct: 609 LQVQYRMHPELTVFPSNTFYEGTLQNGVTISDRTHSGNFPWPNKQKPMIFINVT-GQEQL 667
Query: 62 RGGSVSYQNVDEA-KFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLK-CLQHEFRN-V 118
SY N EA +Y Q T+K L K +GIITPYK Q L + RN
Sbjct: 668 SASGTSYLNTQEAVAVEQAVYYLYQNTVK---LNK--IGIITPYKGQRTYILSYLQRNGQ 722
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASN-HGVGFVADIRRMNVALTRARRALWV 177
L + +D+ + +VD FQG+E+D II+SCVR+++ G+GF+ + RR+NV +TRAR L V
Sbjct: 723 LPYNQYRDIEVASVDGFQGREKDFIIISCVRSNDTQGIGFLTNPRRLNVTITRARYGLIV 782
Query: 178 MGNAGALTQSDDWAALIADSKARNCYMDMDSLPKEFSVALAAKAPGYGPLQGKIPH 233
+GNA L++ + W ++ N + D+D L + L + + P Q IP
Sbjct: 783 IGNARVLSKDNLWNNML------NHFKDLDLLMEGSLPNLKSSQMKFRPPQKFIPE 832
>gi|315049715|ref|XP_003174232.1| ATP-dependent helicase NAM7 [Arthroderma gypseum CBS 118893]
gi|311342199|gb|EFR01402.1| ATP-dependent helicase NAM7 [Arthroderma gypseum CBS 118893]
Length = 1094
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/208 (36%), Positives = 115/208 (55%), Gaps = 10/208 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVL-RPYVFFDVIHGRES 60
L+VQYRMHP + F S FY+G L + S + L V + PV +P +F+ + G E
Sbjct: 667 LNVQYRMHPCLSQFSSNMFYEGSLQNGVSSEDRLLKNVDFPWPVADKPMMFWSNL-GNEE 725
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCL--QHEFRNV 118
SY N EA E + G+ +GIITPY+ Q + +
Sbjct: 726 ISASGTSYLNRTEAAN----VEKIVTRFFKAGVKPSGIGIITPYEGQRSYVVSSMQLTGT 781
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWV 177
E K++ + +VDAFQG+E+D I++SCVR+++H G+GF++D RR+NVALTRA+ L +
Sbjct: 782 FKKEWYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLVI 841
Query: 178 MGNAGALTQSDDWAALIADSKARNCYMD 205
+GN L++ W L+ K +NC ++
Sbjct: 842 LGNPKVLSKHPLWNYLLRHFKEQNCLVE 869
>gi|399949986|gb|AFP65642.1| component of a tRNA splicing complex, sen1 [Chroomonas
mesostigmatica CCMP1168]
Length = 753
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 111/214 (51%), Gaps = 23/214 (10%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES- 60
L QYRMHP I F +R FY+ L DSE+V L + + + P +FFDV G +
Sbjct: 509 FLETQYRMHPQISSFIARKFYKNGLKDSENVSLLKNFQFLRG--FGPLIFFDVCEGNDRF 566
Query: 61 HRGGSVSYQNVDEAKFG-------VCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH 113
H S+ N+DE + +C++ +L ++GII Y+ Q+ Q
Sbjct: 567 HLKQKNSWCNLDEIRLVSFIIRGIICIFSNLSWR---------SIGIIASYQGQIGEFQD 617
Query: 114 EFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRAR 172
++ E K IN+VD FQG+E++++ S VRA GVGF++D RR+NVA TRA+
Sbjct: 618 --FGIMKQSEFKG-QINSVDGFQGREKEIVFFSSVRAKLERGVGFLSDCRRINVAFTRAK 674
Query: 173 RALWVMGNAGALTQSDDWAALIADSKARNCYMDM 206
W +GN L + +WA I D++ R D+
Sbjct: 675 SCFWAVGNFSTLQKDQNWAEAILDARKRGRLFDI 708
>gi|326469176|gb|EGD93185.1| ATP-dependent DNA helicase [Trichophyton tonsurans CBS 112818]
Length = 1064
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/208 (36%), Positives = 115/208 (55%), Gaps = 10/208 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVL-RPYVFFDVIHGRES 60
L+VQYRMHP + F S FY+G L + S + L V + PV +P +F+ + G E
Sbjct: 637 LNVQYRMHPCLSQFSSNMFYEGSLQNGVSSEDRLLKNVDFPWPVADKPMMFWSNL-GNEE 695
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCL--QHEFRNV 118
SY N EA E + G+ +GIITPY+ Q + +
Sbjct: 696 ISASGTSYLNRTEAAN----VEKIVTRFFKAGVKPSGIGIITPYEGQRSYVVSSMQLTGT 751
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWV 177
E K++ + +VDAFQG+E+D I++SCVR+++H G+GF++D RR+NVALTRA+ L +
Sbjct: 752 FKKEWYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLVI 811
Query: 178 MGNAGALTQSDDWAALIADSKARNCYMD 205
+GN L++ W L+ K +NC ++
Sbjct: 812 LGNPKVLSKHPLWNYLLRHFKEQNCLVE 839
>gi|302505946|ref|XP_003014930.1| hypothetical protein ARB_06689 [Arthroderma benhamiae CBS 112371]
gi|291178501|gb|EFE34290.1| hypothetical protein ARB_06689 [Arthroderma benhamiae CBS 112371]
Length = 1080
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/208 (36%), Positives = 115/208 (55%), Gaps = 10/208 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVL-RPYVFFDVIHGRES 60
L+VQYRMHP + F S FY+G L + S + L V + PV +P +F+ + G E
Sbjct: 653 LNVQYRMHPCLSQFSSNMFYEGSLQNGVSSEDRLLKNVDFPWPVADKPMMFWSNL-GNEE 711
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCL--QHEFRNV 118
SY N EA E + G+ +GIITPY+ Q + +
Sbjct: 712 ISASGTSYLNRTEAAN----VEKIVTRFFKAGVKPSGIGIITPYEGQRSYVVSSMQLTGT 767
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWV 177
E K++ + +VDAFQG+E+D I++SCVR+++H G+GF++D RR+NVALTRA+ L +
Sbjct: 768 FKKEWYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLVI 827
Query: 178 MGNAGALTQSDDWAALIADSKARNCYMD 205
+GN L++ W L+ K +NC ++
Sbjct: 828 LGNPKVLSKHPLWNYLLRHFKEQNCLVE 855
>gi|66804903|ref|XP_636184.1| hypothetical protein DDB_G0289503 [Dictyostelium discoideum AX4]
gi|60464545|gb|EAL62683.1| hypothetical protein DDB_G0289503 [Dictyostelium discoideum AX4]
Length = 1255
Score = 120 bits (300), Expect = 1e-24, Method: Composition-based stats.
Identities = 75/215 (34%), Positives = 121/215 (56%), Gaps = 18/215 (8%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSE--SVINLPDEVYYKDPVLRPYVFFDVIHGRE 59
L+ QYRMHP I F S FY G L D E S+ + + ++ DP P FF++ +
Sbjct: 889 FLNTQYRMHPVISKFISEEFYNGTLKDGENVSIDSFNNCKFHFDPSFGPMKFFNLPKSDQ 948
Query: 60 SHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVL 119
S+ Q+ + F + + E ++K + K++ GIITPYKLQ+ ++ + L
Sbjct: 949 IVIKKSIMNQDEIDKVFTL-IKELIEKYPECK---KLSFGIITPYKLQMIQIKEQ----L 1000
Query: 120 NSEEGK--DLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRALW 176
N E + ++ ++T+D QG E+D+IIMSCVR + +G+GF++D RR+NVALTRA+ L+
Sbjct: 1001 NRSEHRYLNISVSTIDGVQGSEKDIIIMSCVRCTEKYGIGFLSDRRRINVALTRAKLGLY 1060
Query: 177 VMGNAGALTQSDDWAALIADSKARNCYMDMDSLPK 211
V+G + L + + W + S +D D + K
Sbjct: 1061 VIGTSWVLEKDNTWGNFLKYST-----IDFDQIYK 1090
>gi|327293656|ref|XP_003231524.1| ATP-dependent DNA helicase [Trichophyton rubrum CBS 118892]
gi|326466152|gb|EGD91605.1| ATP-dependent DNA helicase [Trichophyton rubrum CBS 118892]
Length = 1093
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/208 (36%), Positives = 115/208 (55%), Gaps = 10/208 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVL-RPYVFFDVIHGRES 60
L+VQYRMHP + F S FY+G L + S + L V + PV +P +F+ + G E
Sbjct: 666 LNVQYRMHPCLSQFSSNMFYEGSLQNGVSSEDRLLKNVDFPWPVADKPMMFWSNL-GNEE 724
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCL--QHEFRNV 118
SY N EA E + G+ +GIITPY+ Q + +
Sbjct: 725 ISASGTSYLNRTEAAN----VEKIVTRFFKAGVKPSGIGIITPYEGQRSYVVSSMQLTGT 780
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWV 177
E K++ + +VDAFQG+E+D I++SCVR+++H G+GF++D RR+NVALTRA+ L +
Sbjct: 781 FKKEWYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLVI 840
Query: 178 MGNAGALTQSDDWAALIADSKARNCYMD 205
+GN L++ W L+ K +NC ++
Sbjct: 841 LGNPKVLSKHPLWNYLLRHFKEQNCLVE 868
>gi|326479319|gb|EGE03329.1| hypothetical protein TEQG_02362 [Trichophyton equinum CBS 127.97]
Length = 1093
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/208 (36%), Positives = 115/208 (55%), Gaps = 10/208 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVL-RPYVFFDVIHGRES 60
L+VQYRMHP + F S FY+G L + S + L V + PV +P +F+ + G E
Sbjct: 666 LNVQYRMHPCLSQFSSNMFYEGSLQNGVSSEDRLLKNVDFPWPVADKPMMFWSNL-GNEE 724
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCL--QHEFRNV 118
SY N EA E + G+ +GIITPY+ Q + +
Sbjct: 725 ISASGTSYLNRTEAAN----VEKIVTRFFKAGVKPSGIGIITPYEGQRSYVVSSMQLTGT 780
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWV 177
E K++ + +VDAFQG+E+D I++SCVR+++H G+GF++D RR+NVALTRA+ L +
Sbjct: 781 FKKEWYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLVI 840
Query: 178 MGNAGALTQSDDWAALIADSKARNCYMD 205
+GN L++ W L+ K +NC ++
Sbjct: 841 LGNPKVLSKHPLWNYLLRHFKEQNCLVE 868
>gi|392567037|gb|EIW60212.1| ATP dependent helicase, partial [Trametes versicolor FP-101664 SS1]
Length = 1084
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 118/212 (55%), Gaps = 13/212 (6%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + +FPS FY+G L + + L V + PV +FF G+E
Sbjct: 673 LQVQYRMHPCLSEFPSNMFYEGTLQNGVTAPERLRKNVDFPWPVPDTPMFFYQNLGQEEI 732
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
S+ N EA + + + K KS G+ +G+ITPY+ Q + + +F L
Sbjct: 733 SSSGTSFLNRTEAS---NVEKIVTKFFKS-GVVPSQIGVITPYEGQRSYIVNYMQFNGSL 788
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+ K++ + +VDAFQG+E+D II+SCVR++ H G+GF+ D RR+NVALTRA+ + ++
Sbjct: 789 KKDLYKEIEVASVDAFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAKYGVVIL 848
Query: 179 GNAGALT-----QSDDWAALIADSKARNCYMD 205
GN L+ Q W L+ K +NC ++
Sbjct: 849 GNPKVLSKLTRLQHPLWHYLLTHYKEKNCLVE 880
>gi|242399980|ref|YP_002995405.1| DNA helicase, UvrD/REP family [Thermococcus sibiricus MM 739]
gi|242266374|gb|ACS91056.1| DNA helicase, UvrD/REP family [Thermococcus sibiricus MM 739]
Length = 716
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/221 (34%), Positives = 127/221 (57%), Gaps = 27/221 (12%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESV--INLPD----EVYYKDP---VLR---PY 49
+L +QYRM+ + +FPSR FY G++ SV I L D E ++ +P +L+ P
Sbjct: 501 MLEIQYRMNQLLMEFPSREFYNGKIKADGSVKDITLADLKVREPFFGEPWDSILKREEPL 560
Query: 50 VFFDVIHGR---ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKL 106
+F D + E R GS S +N EA L + + L MG+ K +GIITPY
Sbjct: 561 IFVDTSNRTDKWERQRKGSTSRENPLEA----LLVREIVERLLRMGIKKEWIGIITPYDD 616
Query: 107 QLKCLQHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMN 165
Q+ + R+++ +E + I+TVD +QG+E+++II+S VR++ G +GF+ D+RR+N
Sbjct: 617 QVDSI----RSIIQDDE---IEIHTVDGYQGREKEIIILSLVRSNKKGELGFLMDLRRLN 669
Query: 166 VALTRARRALWVMGNAGALTQSDDWAALIADSKARNCYMDM 206
V++TRA+R L V+G++ L + + LI K Y+++
Sbjct: 670 VSITRAKRKLVVIGDSETLVNHETYKRLIHFVKKYGRYIEL 710
>gi|339251874|ref|XP_003371160.1| hypothetical protein Tsp_09417 [Trichinella spiralis]
gi|316968637|gb|EFV52895.1| hypothetical protein Tsp_09417 [Trichinella spiralis]
Length = 1030
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 125/222 (56%), Gaps = 17/222 (7%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRL----TDSESVINLPDEVYYKDPVLRPYVFFDVIHGR 58
L VQYRMHP + PS FY+G L T+ E ++ + V ++ P +FF +
Sbjct: 649 LQVQYRMHPLLSSLPSNLFYEGTLQNGVTEQERIL---EGVDFRWPNPTVPMFFWCTASQ 705
Query: 59 ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLK-CLQHEFRN 117
E S+ N EA E + G+ +GIITPY+ Q +QH +
Sbjct: 706 EEISSSGTSFLNRAEAAH----IEKIATKFLRSGIRADQIGIITPYEGQRAYIVQHMLLS 761
Query: 118 -VLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRAL 175
LN++ +++ + +VDAFQG+E+D+I++SCVR++ H G+GF+ D RR+NVALTRAR L
Sbjct: 762 GPLNNKLYQEIEVASVDAFQGREKDIILLSCVRSNEHSGIGFLNDPRRLNVALTRARYGL 821
Query: 176 WVMGNAGALTQSDDWAALIADSKARNCYMD--MDSLPKEFSV 215
++GN L++ W +L+ + +C +D +++L KE+ V
Sbjct: 822 IIVGNPKVLSRQPMWHSLLRFCRENHCLLDGPLNAL-KEYKV 862
>gi|302660352|ref|XP_003021856.1| hypothetical protein TRV_04033 [Trichophyton verrucosum HKI 0517]
gi|291185774|gb|EFE41238.1| hypothetical protein TRV_04033 [Trichophyton verrucosum HKI 0517]
Length = 1080
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/208 (36%), Positives = 115/208 (55%), Gaps = 10/208 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVL-RPYVFFDVIHGRES 60
L+VQYRMHP + F S FY+G L + S + L V + PV +P +F+ + G E
Sbjct: 653 LNVQYRMHPCLSQFSSNMFYEGSLQNGVSSEDRLLKNVDFPWPVADKPMMFWSNL-GNEE 711
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCL--QHEFRNV 118
SY N EA E + G+ +GIITPY+ Q + +
Sbjct: 712 ISASGTSYLNRTEAAN----VEKIVTRFFKAGVKPSGIGIITPYEGQRSYVVSSMQLTGT 767
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWV 177
E K++ + +VDAFQG+E+D I++SCVR+++H G+GF++D RR+NVALTRA+ L +
Sbjct: 768 FKKEWYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLVI 827
Query: 178 MGNAGALTQSDDWAALIADSKARNCYMD 205
+GN L++ W L+ K +NC ++
Sbjct: 828 LGNPKVLSKHPLWNYLLRHFKEQNCLVE 855
>gi|284161290|ref|YP_003399913.1| DNA helicase [Archaeoglobus profundus DSM 5631]
gi|284011287|gb|ADB57240.1| DNA helicase [Archaeoglobus profundus DSM 5631]
Length = 636
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 117/203 (57%), Gaps = 24/203 (11%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESV--INLPD-EVYYKDPVLRP---YVFFDVI 55
+L +QYRM+ + +FP++ FY G+L ESV I L D V +D ++ P +F D
Sbjct: 435 MLEIQYRMNEKLMEFPNKEFYGGKLKADESVRNITLADLRVESEDEIVNPRNVLIFLDTS 494
Query: 56 H---GRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQ 112
E R GS S +N EAK + + K L G+ + +G+ITPY+ Q+ L+
Sbjct: 495 KCPDRFERQRKGSTSRENPLEAK----IVTKIVKKLVRAGVKREWIGVITPYEDQVDLLR 550
Query: 113 HEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRA 171
D+ +NTVD +QG+E++VII+S VR++ G +GF+ D+RR+NVALTRA
Sbjct: 551 RMI----------DVEVNTVDGYQGREKEVIIISFVRSNRRGEIGFLEDLRRLNVALTRA 600
Query: 172 RRALWVMGNAGALTQSDDWAALI 194
+R L ++G++ L+ + + LI
Sbjct: 601 KRKLIMVGDSKTLSTHETYRRLI 623
>gi|255713384|ref|XP_002552974.1| KLTH0D05786p [Lachancea thermotolerans]
gi|238934354|emb|CAR22536.1| KLTH0D05786p [Lachancea thermotolerans CBS 6340]
Length = 982
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/213 (36%), Positives = 119/213 (55%), Gaps = 20/213 (9%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRL-----TDSESVINLPDEVYYKDPVLRPYVFFDVIHG 57
L VQYRM+PH+ +FPS FY+G L + SV N + P+ + F +G
Sbjct: 640 LEVQYRMNPHLSEFPSNMFYEGSLQNGVTIEQRSVTN----STFPWPIHDLPMMFWSNYG 695
Query: 58 RESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRN 117
RE G SY N EA C E + L G+ +G+ITPY+ Q + +
Sbjct: 696 REEISGNGTSYLNRIEAMN--C--ERVITKLFKDGVKPDQIGVITPYEGQRAYIVQYMQ- 750
Query: 118 VLNSEEGKDLYIN----TVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRAR 172
+N K+LY+N +VDAFQG+E+D II+SCVRA+ +GF++D RR+NVALTR++
Sbjct: 751 -MNGSMDKELYMNVEVASVDAFQGREKDYIILSCVRANEQQAIGFLSDPRRLNVALTRSK 809
Query: 173 RALWVMGNAGALTQSDDWAALIADSKARNCYMD 205
L ++GN +L+++ W+ L+ + + C ++
Sbjct: 810 YGLVILGNPRSLSRNSLWSHLLVYFREKGCLVE 842
>gi|390960972|ref|YP_006424806.1| DNA helicase [Thermococcus sp. CL1]
gi|390519280|gb|AFL95012.1| DNA helicase [Thermococcus sp. CL1]
Length = 660
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/224 (34%), Positives = 126/224 (56%), Gaps = 28/224 (12%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESV---------INLPDEVYYKDPVLRP---Y 49
+L+VQYRM+ + FPSR FY GR+ ESV + PDE VL+P
Sbjct: 447 MLTVQYRMNERLMRFPSREFYDGRIEADESVRSITLVDLGVESPDEGDVWAEVLKPGNVL 506
Query: 50 VFFDVIHGR---ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKL 106
VF D E R GS S +N EA+ + E +++ LK +G+ +G+ITPY
Sbjct: 507 VFIDTARRENRFERQRYGSESRENPLEARL---VREAIERLLK-LGVRSEWIGVITPYDD 562
Query: 107 QLKCLQHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMN 165
Q R++++S +++ + TVD +QG+E++VI++S VR++ G +GF+ D+RR+N
Sbjct: 563 Q--------RDLISSLLPEEVEVKTVDGYQGREKEVIVLSFVRSNKRGELGFLKDLRRLN 614
Query: 166 VALTRARRALWVMGNAGALTQSDDWAALIADSKARNCYMDMDSL 209
V+LTRA+R L ++G++ L+ + L+ + R +D + L
Sbjct: 615 VSLTRAKRKLILIGDSSTLSAHATYKRLVEFVRERETVVDTNEL 658
>gi|321253648|ref|XP_003192804.1| ATP-dependent RNA helicase of the SFI superfamily Nam7p
[Cryptococcus gattii WM276]
gi|317459273|gb|ADV21017.1| ATP-dependent RNA helicase of the SFI superfamily Nam7p
[Cryptococcus gattii WM276]
Length = 1097
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/209 (36%), Positives = 116/209 (55%), Gaps = 12/209 (5%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + +F S FY+G L + + L V + PV +FF G E
Sbjct: 680 LQVQYRMHPCLSEFSSNLFYEGTLQNGVTAPERLRKNVDFPWPVADTPMFFHQNLGTEEI 739
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
S+ N EA + + + K KS G+ +G+ITPY+ Q + + L+
Sbjct: 740 SSSGTSFLNRTEAS---NVEKMVTKFFKS-GVLPNQIGVITPYEGQRSYIASYMQ--LHG 793
Query: 122 EEGKDLY----INTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALW 176
KDLY + +VDAFQG+E+D II+SCVR++ H G+GF+ D RRMNVALTRA+ +
Sbjct: 794 SLKKDLYKEVEVASVDAFQGREKDYIILSCVRSNEHQGIGFLNDPRRMNVALTRAKYGVV 853
Query: 177 VMGNAGALTQSDDWAALIADSKARNCYMD 205
++GN L++ W L++ K + C+++
Sbjct: 854 ILGNPKVLSKHPLWLYLLSHYKEKGCFVE 882
>gi|393911179|gb|EFO25239.2| nonsense mRNA reducing factor 1 NORF1 [Loa loa]
Length = 1059
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/243 (33%), Positives = 131/243 (53%), Gaps = 17/243 (6%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRL----TDSESVINLPDEVYYKDPVLRPYVFFDVIHGR 58
L VQYRMHP + FPS FY+G L T+ E + D ++ PV + F +G+
Sbjct: 662 LQVQYRMHPALSSFPSNVFYEGSLQNGVTEGERQLIGID---WQWPVPDKPMMFWSCYGQ 718
Query: 59 ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFR 116
E S+ N EA E L G+ +GIITPY+ Q + + +
Sbjct: 719 EELSSSGTSFLNRTEAAN----VEKLATRFLKAGIKPEQIGIITPYEGQRSYIVQFMQTQ 774
Query: 117 NVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRAL 175
L+S+ ++ + VDAFQG+E+D+II++CVR+++H G+GF+ D RR+NVALTRA+ L
Sbjct: 775 GALHSKLYLEMEVANVDAFQGREKDIIIVTCVRSNDHQGIGFLNDSRRLNVALTRAKFGL 834
Query: 176 WVMGNAGALTQSDDWAALIADSKARNCYMD--MDSL-PKEFSVALAAKAPGYGPLQGKIP 232
++GNA L++ W L++ K + C ++ +++L P +++ + P + IP
Sbjct: 835 IIVGNAKVLSRHPLWNYLLSVFKEKGCLVEGPLNNLKPSPITLSKPRRVPHVMNMNRFIP 894
Query: 233 HNA 235
A
Sbjct: 895 RGA 897
>gi|304313994|ref|YP_003849141.1| DNA helicase [Methanothermobacter marburgensis str. Marburg]
gi|302587453|gb|ADL57828.1| predicted DNA helicase [Methanothermobacter marburgensis str.
Marburg]
Length = 654
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/207 (37%), Positives = 119/207 (57%), Gaps = 28/207 (13%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESV----------INLPDEVYYKDPVLR-PYV 50
+L+ QYRM+P I +FP+R FY GR+ S+ +PD + ++ R P +
Sbjct: 440 MLNCQYRMNPAIMEFPNREFYGGRIRAHPSLEEISVLDVISTEIPDSMPHRKLAERDPVL 499
Query: 51 FFDVIH-GRESHR-GGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQL 108
F D GR R GS S QN EA V + L + MG+ + +GIITPY Q+
Sbjct: 500 FIDTSKVGRGERRLKGSTSIQNPLEADLAVIIAGALIR----MGVKEEEIGIITPYDDQV 555
Query: 109 KCLQHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVA 167
++++S G + +N+VD FQG+ER+VII+S VR+++ G +GF+ D+RR+NV+
Sbjct: 556 --------DLISSMTGVE--VNSVDGFQGREREVIIISMVRSNSEGNIGFLRDLRRLNVS 605
Query: 168 LTRARRALWVMGNAGALTQSDDWAALI 194
LTRARR L ++G+ G L+ + LI
Sbjct: 606 LTRARRKLIIIGDTGTLSSHPSYRRLI 632
>gi|341582257|ref|YP_004762749.1| DNA helicase [Thermococcus sp. 4557]
gi|340809915|gb|AEK73072.1| DNA helicase, putative [Thermococcus sp. 4557]
Length = 710
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 127/228 (55%), Gaps = 32/228 (14%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESV--INLPDEVYYKDP--------VLRP--- 48
+L+VQYRM+ + +FPSR FY GR+ ES+ I L D + K P VLRP
Sbjct: 445 MLTVQYRMNERLMEFPSREFYGGRIEADESIRAITLAD-LGVKSPACDGLWNEVLRPENV 503
Query: 49 YVFFDVIHGRES----HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPY 104
VF D GRE R GS S +N EA+ L + + + L +GL +G+ITPY
Sbjct: 504 LVFVDT-SGREDRFERQRYGSESRENPLEAR----LVKEVVEKLLELGLNPEWIGVITPY 558
Query: 105 KLQLKCLQHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRR 163
Q R+++ S +++ + TVD +QG+E++VI++S VR++ G +GF+ D+RR
Sbjct: 559 DDQ--------RDLIRSLLPEEVEVKTVDGYQGREKEVIVLSFVRSNRKGELGFLKDLRR 610
Query: 164 MNVALTRARRALWVMGNAGALTQSDDWAALIADSKARNCYMDMDSLPK 211
+NV+LTRA+R L ++G++ L+ + L+ R +D L K
Sbjct: 611 LNVSLTRAKRKLILIGDSSTLSVHPTYKRLVEFVSERETVVDATGLTK 658
>gi|223478666|ref|YP_002583052.1| DNA helicase [Thermococcus sp. AM4]
gi|214033892|gb|EEB74718.1| DNA helicase [Thermococcus sp. AM4]
Length = 660
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/225 (35%), Positives = 130/225 (57%), Gaps = 32/225 (14%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESV--INLPDEVYYKDP--------VLRP--- 48
+L+VQYRM+ + +FPSR FY GR+ ESV I L D + K P VL+P
Sbjct: 447 MLTVQYRMNERLMEFPSREFYDGRIEADESVRGITLAD-LGVKSPEEGDAWAKVLKPENV 505
Query: 49 YVFFDVIHGRES----HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPY 104
VF D GRE R GS S +N EA+ L + + L S+G+ +G+I+PY
Sbjct: 506 LVFIDT-AGREDRFERQRYGSESRENPLEAR----LVKEAVEGLLSLGVKPEWIGVISPY 560
Query: 105 KLQLKCLQHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRR 163
Q R++++S +++ + TVD +QG+E++VI++S VR++ G +GF+ D+RR
Sbjct: 561 DDQ--------RDLISSLLPEEIEVKTVDGYQGREKEVIVLSFVRSNRKGELGFLKDLRR 612
Query: 164 MNVALTRARRALWVMGNAGALTQSDDWAALIADSKARNCYMDMDS 208
+NV+LTRA+R L ++G++ L+ + L+ + R Y+ ++S
Sbjct: 613 LNVSLTRAKRKLILIGDSSTLSSHPTYKRLVEFVRERETYVPLNS 657
>gi|395506275|ref|XP_003757460.1| PREDICTED: probable helicase senataxin [Sarcophilus harrisii]
Length = 2753
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/207 (35%), Positives = 115/207 (55%), Gaps = 21/207 (10%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQ-----GRLTDSESVINLPDEVYYKDPVLRPYVFFDVI 55
+ L+VQYRMHP I FPS + Y RLT+ + D +PY+ FDV
Sbjct: 2316 LQLTVQYRMHPDICLFPSSYIYNRTLKTNRLTEESRCTS--------DWPFQPYLVFDV- 2366
Query: 56 HGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEF 115
G S R SY N+ E K + + + ++ K + + +GIIT YK Q +Q E
Sbjct: 2367 -GDGSERREHDSYVNIQEIKLVMEIIKLIKDRRKDITIR--NIGIITHYKAQKMMIQQEL 2423
Query: 116 RNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRA--SNHGVGFVADIRRMNVALTRARR 173
E+ + ++TVDAFQG+++D II++CVRA S +GF+A ++RMNV +TRA+
Sbjct: 2424 DKEF--EKTRPGEVDTVDAFQGRQKDCIIVTCVRANASQGSIGFLASLQRMNVTITRAKY 2481
Query: 174 ALWVMGNAGALTQSDDWAALIADSKAR 200
+L+++G+ L ++ W LI D++ R
Sbjct: 2482 SLFILGHLRTLMENQHWNHLIQDAQKR 2508
>gi|334311942|ref|XP_001370697.2| PREDICTED: probable helicase senataxin [Monodelphis domestica]
Length = 2675
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/207 (35%), Positives = 115/207 (55%), Gaps = 21/207 (10%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQ-----GRLTDSESVINLPDEVYYKDPVLRPYVFFDVI 55
+ L+VQYRMHP I FPS + Y RLT+ + D +PY+ FDV
Sbjct: 2240 LQLTVQYRMHPDICLFPSSYIYNRTLKTNRLTEESRCTS--------DWPFQPYLVFDV- 2290
Query: 56 HGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEF 115
G S R + SY NV E K + L + ++ K + + +GIIT YK Q +Q E
Sbjct: 2291 -GDGSERRENDSYVNVQEIKLVMELIKLIKDRRKDITMR--NIGIITHYKAQKMMIQQEL 2347
Query: 116 RNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRA--SNHGVGFVADIRRMNVALTRARR 173
E + ++TVDAFQG+++D +I++CVRA S +GF+A ++R+NV +TRA+
Sbjct: 2348 DKEF--ERNRPGEVDTVDAFQGRQKDCVIVTCVRANASQGSIGFLASLQRLNVTITRAKY 2405
Query: 174 ALWVMGNAGALTQSDDWAALIADSKAR 200
+L+++G+ L ++ W LI D++ R
Sbjct: 2406 SLFILGHLRTLMENQHWNHLIQDAQKR 2432
>gi|358055738|dbj|GAA98083.1| hypothetical protein E5Q_04765 [Mixia osmundae IAM 14324]
Length = 1047
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/207 (35%), Positives = 112/207 (54%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + +FPS FY+G L + + + V + P ++F G+E
Sbjct: 686 LQVQYRMHPCLSEFPSNMFYEGSLQNGVTAPERIKKNVDFPWPQPTTPMYFHQNLGQEEI 745
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHE--FRNVL 119
S+ N EA E + L G+ +GI+TPY+ Q + + F L
Sbjct: 746 SSSGTSFLNRTEAAN----VEKVVTRLFKSGVMPHQIGIVTPYEGQRAYIANYMLFNGSL 801
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
E KD+ + +VDAFQG+E+D I++SCVR++ H G+GF+ D RR+NVALTRA+ L ++
Sbjct: 802 KKELYKDIEVASVDAFQGREKDYILLSCVRSNEHQGIGFLNDPRRLNVALTRAKYGLVIL 861
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN L++ W L+ K + C ++
Sbjct: 862 GNPKVLSKHALWHYLLTHYKEKGCLVE 888
>gi|324500307|gb|ADY40148.1| Regulator of nonsense transcripts 1 [Ascaris suum]
Length = 1087
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/210 (36%), Positives = 115/210 (54%), Gaps = 14/210 (6%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRL----TDSESVINLPDEVYYKDPVLRPYVFFDVIHGR 58
L VQYRMHP + FPS FY+G L T E + D ++ PV + F +G+
Sbjct: 663 LQVQYRMHPALSAFPSNVFYEGTLQNGVTQGERQLAGVD---WQWPVPDKPMMFWSCYGQ 719
Query: 59 ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFR 116
E SY N EA E + GL +GIITPY+ Q + + +
Sbjct: 720 EELSPSGTSYLNRTEAAN----VEKVATRFLKAGLRPEQIGIITPYEGQRSYIVQFMQTQ 775
Query: 117 NVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRAL 175
L+S+ ++ + VDAFQG+E+D+II++CVR++ H G+GF+ D RR+NVALTRA+ +
Sbjct: 776 GALHSKLYLEMEVANVDAFQGREKDIIIVTCVRSNEHQGIGFLNDSRRLNVALTRAKYGV 835
Query: 176 WVMGNAGALTQSDDWAALIADSKARNCYMD 205
++GNA L++ W L+ K +NC ++
Sbjct: 836 IIIGNAKILSRHPLWNQLLTMFKEKNCLVE 865
>gi|363749513|ref|XP_003644974.1| hypothetical protein Ecym_2426 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888607|gb|AET38157.1| Hypothetical protein Ecym_2426 [Eremothecium cymbalariae
DBVPG#7215]
Length = 1002
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/215 (35%), Positives = 119/215 (55%), Gaps = 14/215 (6%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPD-EVYYKDPVLRPYVFFDVIHGRESH 61
L VQYRM+P++ +FPS FY+G L + +V E + P+ + F +GRE
Sbjct: 644 LEVQYRMNPYLSEFPSNMFYEGTLQNGVTVEQRTILESSFPWPISDIPMMFWANYGREEI 703
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
SY N EA E + L G+ +G+ITPY+ Q + + +N
Sbjct: 704 SANGTSYLNRIEA----INCERIITRLFKDGVKPAQIGVITPYEGQRAYIVQYMQ--MNG 757
Query: 122 EEGKDLY----INTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALW 176
KD+Y + +VDAFQG+E+D II+SCVRA++H +GF+ D RR+NVALTRA+ L
Sbjct: 758 SMDKDMYMTVEVGSVDAFQGREKDYIILSCVRANDHQSIGFLVDPRRLNVALTRAKYGLA 817
Query: 177 VMGNAGALTQSDDWAALIADSKARNCYMD--MDSL 209
++GN +L ++ W L+ + + C ++ MD+L
Sbjct: 818 ILGNPTSLFRNRLWNHLLIHFREKGCLVEGTMDNL 852
>gi|344301641|gb|EGW31946.1| ATP-dependent helicase NAM7 [Spathaspora passalidarum NRRL Y-27907]
Length = 1000
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/216 (37%), Positives = 122/216 (56%), Gaps = 14/216 (6%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDS-ESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + DFPS FY+G L + S L ++ + P++ + F +GRE
Sbjct: 667 LEVQYRMHPCLSDFPSNMFYEGSLQNGVTSDDRLIEDATFPWPMVDTPMMFWANYGREEL 726
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
S+ N EA E + L G+ +G+ITPY+ Q L +F ++ ++
Sbjct: 727 SSSGNSFLNRVEAMN----VEKIITRLFKDGVTPDQIGVITPYEGQRAYLV-QFMSMNST 781
Query: 122 EEGK-----DLYINTVDAFQGQERDVIIMSCVRASN-HGVGFVADIRRMNVALTRARRAL 175
K D+ I +VDAFQG+E+D II+SCVRA++ +GF++D RR+NVALTRA+ L
Sbjct: 782 LLDKRDQYLDVEITSVDAFQGREKDFIILSCVRANDAQSIGFLSDPRRLNVALTRAKYGL 841
Query: 176 WVMGNAGALTQSDDWAALIADSKARNCYMD--MDSL 209
V+GN AL ++ W L+ + + C +D +D+L
Sbjct: 842 IVLGNPRALCRNRLWNCLLVHFREKGCLVDGPLDNL 877
>gi|170593003|ref|XP_001901254.1| Regulator of nonsense transcripts 1 homolog [Brugia malayi]
gi|158591321|gb|EDP29934.1| Regulator of nonsense transcripts 1 homolog, putative [Brugia
malayi]
Length = 1112
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/258 (31%), Positives = 132/258 (51%), Gaps = 32/258 (12%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDS-----------ESVINLPDEVY----------- 40
L VQYRMHP + FPS FY+G L + + VINL +
Sbjct: 662 LQVQYRMHPALSSFPSNVFYEGSLQNGVTEGKHLSMKRKEVINLSHMCFISGERQLIGID 721
Query: 41 YKDPVLRPYVFFDVIHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGI 100
++ PV + F +G+E S+ N EA E L GL +GI
Sbjct: 722 WQWPVPDKPMMFWSCYGQEELSSSGTSFLNRTEAAN----VEKLATRFLKAGLKPEQIGI 777
Query: 101 ITPYKLQLKCLQH--EFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGF 157
ITPY+ Q + + + L+S+ ++ + VDAFQG+E+D+II++CVR+++H G+GF
Sbjct: 778 ITPYEGQRSYIVQFMQTQGALHSKLYLEMEVANVDAFQGREKDIIIVTCVRSNDHQGIGF 837
Query: 158 VADIRRMNVALTRARRALWVMGNAGALTQSDDWAALIADSKARNCYMD--MDSL-PKEFS 214
+ D RR+NVALTRA+ L ++GNA L++ W L++ K + C ++ +++L P +
Sbjct: 838 LNDSRRLNVALTRAKFGLIIVGNAKVLSRHPLWNYLLSMFKEKGCLVEGPLNNLKPSPIT 897
Query: 215 VALAAKAPGYGPLQGKIP 232
++ + P + IP
Sbjct: 898 LSKPRRIPNIMSMNRFIP 915
>gi|327402000|ref|YP_004342839.1| DNA helicase [Archaeoglobus veneficus SNP6]
gi|327317508|gb|AEA48124.1| DNA helicase [Archaeoglobus veneficus SNP6]
Length = 664
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/207 (37%), Positives = 117/207 (56%), Gaps = 24/207 (11%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLP-DEVYYKDP-------VL--RPYVF 51
+L VQYRM+ + +FPSR FY GRL +SV N+ ++ K+P VL P VF
Sbjct: 442 MLEVQYRMNKKLMEFPSREFYGGRLKADDSVRNITLADLGVKEPKFGFWNEVLGSEPLVF 501
Query: 52 FDVIHGR---ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQL 108
D E R GS S +N EA+ L E L K +G+ +G+ITPY Q+
Sbjct: 502 IDTSKCADRWERQRKGSPSRENELEARIIKELVERLLK----IGVKAGQIGVITPYDDQV 557
Query: 109 KCLQHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVA 167
++ + + +++ + TVD +QG+E+DVII+S VR++ G VGF+ D+RR+NV+
Sbjct: 558 DLIKRYIKGI------EEIEVKTVDGYQGREKDVIIISFVRSNERGEVGFLDDLRRLNVS 611
Query: 168 LTRARRALWVMGNAGALTQSDDWAALI 194
LTRARR L +G+ L+ ++ + I
Sbjct: 612 LTRARRKLIAIGDTETLSTNETYRRFI 638
>gi|254167856|ref|ZP_04874705.1| DNA helicase, putative [Aciduliprofundum boonei T469]
gi|197623147|gb|EDY35713.1| DNA helicase, putative [Aciduliprofundum boonei T469]
Length = 655
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 122/220 (55%), Gaps = 26/220 (11%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY------YKDP---VLRP--- 48
+ L VQYRM+ I FPS+ FY L SV N E ++P + P
Sbjct: 446 ITLRVQYRMNEKIMKFPSKLFYNDLLIAHPSVKNRSIEDLGVSAENLEEPMRSICEPQSI 505
Query: 49 YVFFDVIHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQL 108
VF D+ + +E R GS SY N EA + + L +GL + +GIITPY Q+
Sbjct: 506 IVFLDMQNCKEEKRRGSTSYYNECEA----GMVKDTVDCLLKIGLKEKHIGIITPYDDQV 561
Query: 109 KCLQHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVA 167
L+ +D+ I +VD FQG+E+DVII+S VR+++ G +GF+ D+RR+NVA
Sbjct: 562 DLLRSMI---------EDIEIKSVDGFQGREKDVIIISFVRSNDKGDIGFLDDLRRLNVA 612
Query: 168 LTRARRALWVMGNAGALTQSDDWAALIADSKARNCYMDMD 207
+TRA+R L ++GNA L+ ++ +A LI +++ ++ +D
Sbjct: 613 ITRAKRKLIMLGNAKTLSSNEVYAKLIDYTRSEGKFLKID 652
>gi|18202669|sp|Q98TR3.1|RENT1_FUGRU RecName: Full=Putative regulator of nonsense transcripts 1;
AltName: Full=ATP-dependent helicase RENT1
gi|13161880|emb|CAC33025.1| hypothetical protein [Takifugu rubripes]
Length = 1097
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/207 (36%), Positives = 115/207 (55%), Gaps = 9/207 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY-YKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + FPS FY+G L + + + + + ++ P +FF V G+E
Sbjct: 679 LQVQYRMHPALSAFPSNIFYEGSLQNGVTAGDRIKKGFDFQWPQPEKPMFFYVTQGQEEI 738
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
SY N EA E + L G +GIITPY+ Q L +F L
Sbjct: 739 ASSGTSYLNRTEAAN----VEKITTRLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSL 794
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+++ + + I +VDAFQG+E+D II+SCVRA+ H G+GF+ D RR+NVALTRA+ + ++
Sbjct: 795 HTKLYQ-VEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAKYGVIIV 853
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN AL++ W L+ + K + ++
Sbjct: 854 GNPKALSKQPLWNNLLNNYKEQKVLVE 880
>gi|390344703|ref|XP_786803.3| PREDICTED: regulator of nonsense transcripts 1-like
[Strongylocentrotus purpuratus]
Length = 1386
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/207 (35%), Positives = 111/207 (53%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + FPS FY+G L + + + V + P +FF G+E
Sbjct: 914 LQVQYRMHPSLSAFPSNIFYEGSLQNGVTAAERINRAVDFPFPQPDKPMFFYATTGQEEI 973
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
SY N EA E L G+ +GIITPY+ Q + ++ L
Sbjct: 974 ASSGTSYLNRTEASN----VEKLTTRFLRAGVKPEQIGIITPYEGQRAFIVQYMQYSGPL 1029
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
N + +++ I +VDAFQG+E+D II+SCVRA++H G+GF+ D RR+NVALTR R + ++
Sbjct: 1030 NVKLYQEVEIASVDAFQGREKDYIILSCVRANDHQGIGFLNDPRRLNVALTRGRYGVIIV 1089
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN L++ W L++ K + ++
Sbjct: 1090 GNPKVLSRHPLWNHLLSYYKEQKVLVE 1116
>gi|222629428|gb|EEE61560.1| hypothetical protein OsJ_15908 [Oryza sativa Japonica Group]
Length = 738
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/264 (33%), Positives = 135/264 (51%), Gaps = 47/264 (17%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPD-EVYYKDPVLRPYVFFDVIHGRES 60
LL++QYRMHP I FP+ FY +L D+ +V + Y + PY FF
Sbjct: 486 LLNMQYRMHPSISIFPNISFYDRKLLDAPNVKQKEHRKKYLPGLMFGPYSFF-------- 537
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
N+++A S KVTVG+I PY Q+ +Q + +
Sbjct: 538 ---------NIEDAH--------------SKTKNKVTVGVICPYTAQVLAIQQKLGKM-- 572
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVMG 179
+ + IN+VD FQG E D+II+S VR+++ G VGF+++ +R NV+LTRAR LW++G
Sbjct: 573 KFDPVIVKINSVDGFQGGEEDIIILSTVRSNSDGAVGFLSNRQRTNVSLTRARYCLWILG 632
Query: 180 NAGALTQSDD-WAALIADSKARNCYMDMDSLPKEFSVALAAKAPGYGPLQGKIPHN-ARG 237
NA L++S WA L+ D+K R C+ + +S K+ S LA + KI N +
Sbjct: 633 NATTLSRSGSIWADLVRDAKDRQCFFNANS-DKDISRVLA---------KHKIETNKVKD 682
Query: 238 LRSAGQRHRSFDMNMESRSGTPSE 261
+S + R+ + + SRSG E
Sbjct: 683 RKSTPFKVRNSGVQVPSRSGMKDE 706
>gi|449463400|ref|XP_004149422.1| PREDICTED: uncharacterized protein LOC101220392 [Cucumis sativus]
Length = 877
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 119/208 (57%), Gaps = 5/208 (2%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESV-INLPDEVYYKDPVLRPYVFFDVIHGRES 60
LL+VQ+RMHP I FP+ FY ++ D +V ++ + P+ Y F D+ G+E
Sbjct: 590 LLNVQHRMHPSISYFPNSKFYANKILDGPNVKTKAYEKKFLHGPMFGSYSFIDINEGKEE 649
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKT--LKSMGLGKVTVGIITPYKLQLKCLQHEFRNV 118
G + S++N+ E + +L K + K++VG+++PY Q++ ++
Sbjct: 650 KDGITQSWKNMVEVDVVGKIIHNLYKASCVDRHSKEKISVGVVSPYLAQVEAIKENIGRD 709
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRALWV 177
++ + +++VD FQG E+D+II+S VR++ + +GF++ +R NVALTRAR LW+
Sbjct: 710 YSNCSSFSVKVSSVDGFQGGEKDIIIISTVRSNRSSSIGFLSSNQRTNVALTRARYCLWI 769
Query: 178 MGNAGALTQSDD-WAALIADSKARNCYM 204
+GN L+ SD W L+ D+ R+C+
Sbjct: 770 LGNFTTLSNSDSIWGELVFDAMKRSCFF 797
>gi|389583252|dbj|GAB65987.1| regulator of nonsense transcripts [Plasmodium cynomolgi strain B]
Length = 1470
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 107/189 (56%), Gaps = 12/189 (6%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY-YKD---PVLRPYVFFDVIHGR 58
L VQYRMHP + +FPS FY G L + I L + Y KD P + +FF G
Sbjct: 931 LEVQYRMHPALSEFPSYVFYDGCLQNG---ITLKEREYPLKDFPWPNPKCPMFFYNSTGL 987
Query: 59 ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV 118
E SY N EA E L +TL + GL +G+ITPY+ Q + F+
Sbjct: 988 EEMSASGTSYLNRAEASN----MEKLVRTLINCGLKPTQIGVITPYEGQRAYITSLFQKN 1043
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWV 177
++ + ++ + +VDAFQG+E+D I++SCVR++ G+GF+ D RR+NVALTRA+ L +
Sbjct: 1044 ISYQHSTEIEVASVDAFQGREKDFILLSCVRSNKKLGIGFLNDPRRLNVALTRAKYGLII 1103
Query: 178 MGNAGALTQ 186
GNA L++
Sbjct: 1104 CGNAKVLSR 1112
>gi|449526409|ref|XP_004170206.1| PREDICTED: uncharacterized protein LOC101231716, partial [Cucumis
sativus]
Length = 804
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 119/208 (57%), Gaps = 5/208 (2%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESV-INLPDEVYYKDPVLRPYVFFDVIHGRES 60
LL+VQ+RMHP I FP+ FY ++ D +V ++ + P+ Y F D+ G+E
Sbjct: 581 LLNVQHRMHPSISYFPNSKFYANKILDGPNVKTKAYEKKFLHGPMFGSYSFIDINEGKEE 640
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKT--LKSMGLGKVTVGIITPYKLQLKCLQHEFRNV 118
G + S++N+ E + +L K + K++VG+++PY Q++ ++
Sbjct: 641 KDGITQSWKNMVEVDVVGKIIHNLYKASCVDRHSKEKISVGVVSPYLAQVEAIKENIGRD 700
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRALWV 177
++ + +++VD FQG E+D+II+S VR++ + +GF++ +R NVALTRAR LW+
Sbjct: 701 YSNCSSFSVKVSSVDGFQGGEKDIIIISTVRSNRSSSIGFLSSNQRTNVALTRARYCLWI 760
Query: 178 MGNAGALTQSDD-WAALIADSKARNCYM 204
+GN L+ SD W L+ D+ R+C+
Sbjct: 761 LGNFTTLSNSDSIWGELVFDAMKRSCFF 788
>gi|124802033|ref|XP_001347342.1| regulator of nonsense transcripts, putative [Plasmodium falciparum
3D7]
gi|23494920|gb|AAN35255.1|AE014829_55 regulator of nonsense transcripts, putative [Plasmodium falciparum
3D7]
Length = 1554
Score = 119 bits (297), Expect = 3e-24, Method: Composition-based stats.
Identities = 73/189 (38%), Positives = 105/189 (55%), Gaps = 12/189 (6%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY----YKDPVLRPYVFFDVIHGR 58
L VQYRMHP + +FPS FY G L + I L + Y + P + +FF G
Sbjct: 1016 LEVQYRMHPALSEFPSYVFYDGSLQNG---ITLKEREYPLKSFPWPNAKCPMFFYNSTGL 1072
Query: 59 ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV 118
E SY N EA E L +TL GL +G+ITPY+ Q + F+
Sbjct: 1073 EEMSASGTSYLNRSEASN----MEKLVRTLLQCGLKPSQIGVITPYEGQRAYITSLFQKN 1128
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWV 177
++ + D+ + +VDAFQG+E+D I++SCVR++ G+GF+ D RR+NVALTRA+ L +
Sbjct: 1129 ISFQNSSDIEVASVDAFQGREKDFILLSCVRSNKKLGIGFLNDPRRLNVALTRAKYGLII 1188
Query: 178 MGNAGALTQ 186
GNA L++
Sbjct: 1189 CGNAKVLSR 1197
>gi|149276566|ref|ZP_01882710.1| DNA helicase [Pedobacter sp. BAL39]
gi|149233086|gb|EDM38461.1| DNA helicase [Pedobacter sp. BAL39]
Length = 634
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/210 (35%), Positives = 121/210 (57%), Gaps = 15/210 (7%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
+LL QYRM+ I ++ S FYQG+L +SV + Y D +P +F D
Sbjct: 424 VLLEEQYRMNRSIMEYSSEVFYQGKLKAHDSVAT---HLLYDDD--KPLLFIDTAGASFE 478
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKV-----TVGIITPYKLQLKCLQHEF 115
+ S N DEA F + + L+ ++ + L TV II+PYK Q+ ++
Sbjct: 479 EKTEGHSISNPDEASF---VSKQLETLVQELSLRYSIEDFPTVAIISPYKQQIVHIKELL 535
Query: 116 RNVLNSEEGKD-LYINTVDAFQGQERDVIIMSCVRASNHGV-GFVADIRRMNVALTRARR 173
++ + ++ K + +NT+D+FQGQERDV+++S VR+++ G+ GF+ADIRRMNVA+TRAR+
Sbjct: 536 QHSPDIDKFKSKISVNTIDSFQGQERDVVVISMVRSNDEGIIGFLADIRRMNVAMTRARK 595
Query: 174 ALWVMGNAGALTQSDDWAALIADSKARNCY 203
L V+G++ L + + IA ++ + Y
Sbjct: 596 KLIVIGDSATLCRLPFYENFIAYAQKLDAY 625
>gi|308807923|ref|XP_003081272.1| RNA helicase, putative (ISS) [Ostreococcus tauri]
gi|116059734|emb|CAL55441.1| RNA helicase, putative (ISS) [Ostreococcus tauri]
Length = 963
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/221 (35%), Positives = 123/221 (55%), Gaps = 11/221 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLP-DEVYYKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + DFPS FY+G L++ S + V + PV + F G+E
Sbjct: 661 LGVQYRMHPCLSDFPSNKFYEGVLSNGVSASDRTLSHVDFPWPVPSKPMMFWSQTGQEEM 720
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLK-CLQHEFR-NVL 119
S+ N EA E L + G+ +G++TPY+ Q +QH R VL
Sbjct: 721 SASGTSFLNRAEA----VAVEKCVTHLLNSGVSPEDIGVVTPYEGQRAYVVQHMTRVGVL 776
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+ + KD+ + +VD+FQG+E+D IIM+CVR++ G+GF++D RR+NVA+TRAR L ++
Sbjct: 777 HPQLYKDIQVASVDSFQGKEKDFIIMTCVRSNEKSGIGFLSDPRRLNVAITRARSGLIII 836
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD--MDSLPKEFSVAL 217
GN L + + ++ + + C ++ + SL K+ VAL
Sbjct: 837 GNPKVLNKQLLFHDMLTHFRQKKCLVEGALGSL-KQCMVAL 876
>gi|405123238|gb|AFR98003.1| ATP dependent helicase [Cryptococcus neoformans var. grubii H99]
Length = 1092
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/209 (36%), Positives = 116/209 (55%), Gaps = 12/209 (5%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + +F S FY+G L + + L V + PV +FF G E
Sbjct: 680 LQVQYRMHPCLSEFSSNLFYEGTLQNGVTAPERLRKNVDFPWPVADTPMFFHQNLGTEEI 739
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
S+ N EA + + + K KS G+ +G+ITPY+ Q + + L+
Sbjct: 740 SSSGTSFLNRTEAS---NVEKMVTKFFKS-GVLPNQIGVITPYEGQRSYIASYMQ--LHG 793
Query: 122 EEGKDLY----INTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALW 176
KDLY + +VDAFQG+E+D II+SCVR++ H G+GF+ D RR+NVALTRA+ +
Sbjct: 794 SLKKDLYKEVEVASVDAFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAKYGVV 853
Query: 177 VMGNAGALTQSDDWAALIADSKARNCYMD 205
++GN L++ W L++ K + C+++
Sbjct: 854 ILGNPKVLSKHPLWLYLLSHYKEKGCFVE 882
>gi|209880584|ref|XP_002141731.1| hypothetical protein [Cryptosporidium muris RN66]
gi|209557337|gb|EEA07382.1| hypothetical protein, conserved [Cryptosporidium muris RN66]
Length = 1011
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/237 (33%), Positives = 113/237 (47%), Gaps = 35/237 (14%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKD--PVLRPYVFFDVIHGRE 59
+LS+QYRMHP I +FPS+ FY G L D +I+ + D P +P F V E
Sbjct: 633 MLSMQYRMHPVISEFPSKRFYNGELQDYPGIIDARKSIIPWDSIPFFKPLTFLSV--NSE 690
Query: 60 SHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVT----------VGIITPYKLQLK 109
+ S+S N EA+ L E L L + + + II+PY Q++
Sbjct: 691 EIKNKSIS--NPIEAELVCQLVELLGLILTEVNEKLPSKSDVNNWYDKIAIISPYNEQVR 748
Query: 110 CLQHEFRNVLNSEEGKDLYIN--TVDAFQGQERDVIIMSCVRAS---------------- 151
++ + N I+ T+D FQGQERD II S VRA
Sbjct: 749 LIKSMIKKRFNLPSNIICPIDVCTIDGFQGQERDYIIFSAVRAQYIEPNGIIGNNNRLET 808
Query: 152 -NHGVGFVADIRRMNVALTRARRALWVMGNAGALTQSDDWAALIADSKARNCYMDMD 207
GF+ADIRR+NVALTRA+R LW++G+ L + +WA L + +NC +D
Sbjct: 809 LRTNAGFLADIRRINVALTRAKRNLWIIGHGRYLLGNPEWAHLWNYTAEKNCQFSID 865
>gi|118366801|ref|XP_001016616.1| conserved hypothetical protein [Tetrahymena thermophila]
gi|89298383|gb|EAR96371.1| conserved hypothetical protein [Tetrahymena thermophila SB210]
Length = 834
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/217 (37%), Positives = 121/217 (55%), Gaps = 26/217 (11%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINL---PDEVYYKDPVLRPYVFFDVIHGR 58
+L+ QYRM+P I F S+ FYQ +++D+E + L P+ Y+ + +P VFF+V G
Sbjct: 601 MLNQQYRMNPIISKFISQTFYQDKISDAEKINELVGQPE--IYQLRLFQPVVFFNV-EGN 657
Query: 59 ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV 118
E S Y+N +E+K V +Y L+ T + L K+ GIIT Y Q+K E
Sbjct: 658 EIFEKSS--YKNEEESKAIVEIYNKLRTTFPNFDLNKL--GIITAYSRQVK----EIEKK 709
Query: 119 LNSEEGKD---LYINTVDAFQGQERDVIIMSCVRASN--------HGVGFVADIRRMNVA 167
+ + + D + ++TVD FQG+E+D+II S VRAS +GF+ D RRMNV+
Sbjct: 710 IKAHDKTDKCMVEVHTVDGFQGREKDIIIFSTVRASQVNGEKNTKKTIGFLNDRRRMNVS 769
Query: 168 LTRARRALWVMGNAGALTQSDDWAALIADS-KARNCY 203
L+RAR + V+G+ L S W L S + R+CY
Sbjct: 770 LSRARLCVIVVGDLKQLKFSKLWKGLAEYSIEQRSCY 806
>gi|345567573|gb|EGX50503.1| hypothetical protein AOL_s00075g232 [Arthrobotrys oligospora ATCC
24927]
Length = 1147
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/209 (36%), Positives = 114/209 (54%), Gaps = 12/209 (5%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLRPYVFFDVIHGRESH 61
L+VQYRMHP + +FPS FY+G L + +V L V + PV+ + F G E
Sbjct: 677 LNVQYRMHPCLSEFPSNMFYEGSLQNGVTVQERLRRNVDFPWPVVDSPMMFWSNLGNEEI 736
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
SY N EA C E + G+ +GIITPY+ Q + + N
Sbjct: 737 SASGTSYLNRTEA--AAC--EKIISKFFKAGVSPSQIGIITPYEGQRSYIVSSMQT--NG 790
Query: 122 EEGKDLY----INTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALW 176
K+LY + +VDAFQG+E+D I++SCVR+++H G+GF+ D RR+NVALTRA+ +
Sbjct: 791 SHKKELYKDIEVASVDAFQGREKDYIVLSCVRSNDHQGIGFLNDPRRLNVALTRAKYGVV 850
Query: 177 VMGNAGALTQSDDWAALIADSKARNCYMD 205
++GN L++ W L+ K NC ++
Sbjct: 851 ILGNPKVLSKHPLWHHLLLHYKEHNCLVE 879
>gi|221055089|ref|XP_002258683.1| regulator of nonsense transcripts [Plasmodium knowlesi strain H]
gi|193808753|emb|CAQ39455.1| regulator of nonsense transcripts, putative [Plasmodium knowlesi
strain H]
Length = 1516
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 107/189 (56%), Gaps = 12/189 (6%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY-YKD---PVLRPYVFFDVIHGR 58
L VQYRMHP + +FPS FY G L + I L + Y KD P + +FF G
Sbjct: 1022 LEVQYRMHPALSEFPSYVFYDGCLQNG---ITLKEREYPLKDFPWPNPKCPMFFYNSTGL 1078
Query: 59 ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV 118
E SY N EA E L +TL + GL +G+ITPY+ Q + F+
Sbjct: 1079 EEMSASGTSYLNRAEASN----MEKLVRTLINCGLKPSQIGVITPYEGQRAYITSLFQKN 1134
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWV 177
++ + ++ + +VDAFQG+E+D I++SCVR++ G+GF+ D RR+NVALTRA+ L +
Sbjct: 1135 ISYQHSTEIEVASVDAFQGREKDFILLSCVRSNKKLGIGFLNDPRRLNVALTRAKYGLII 1194
Query: 178 MGNAGALTQ 186
GNA L++
Sbjct: 1195 CGNAKVLSR 1203
>gi|58264876|ref|XP_569594.1| ATP dependent helicase [Cryptococcus neoformans var. neoformans
JEC21]
gi|57225826|gb|AAW42287.1| ATP dependent helicase, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1090
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/209 (36%), Positives = 116/209 (55%), Gaps = 12/209 (5%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + +F S FY+G L + + L V + PV +FF G E
Sbjct: 680 LQVQYRMHPCLSEFSSNLFYEGTLQNGVTAPERLRKHVDFPWPVADTPMFFHQNLGTEEI 739
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
S+ N EA + + + K KS G+ +G+ITPY+ Q + + L+
Sbjct: 740 SSSGTSFLNRTEAS---NVEKMVTKFFKS-GVLPNQIGVITPYEGQRSYIASYMQ--LHG 793
Query: 122 EEGKDLY----INTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALW 176
KDLY + +VDAFQG+E+D II+SCVR++ H G+GF+ D RR+NVALTRA+ +
Sbjct: 794 SLKKDLYKEVEVASVDAFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAKYGVV 853
Query: 177 VMGNAGALTQSDDWAALIADSKARNCYMD 205
++GN L++ W L++ K + C+++
Sbjct: 854 ILGNPKVLSKHPLWLYLLSHYKEKGCFVE 882
>gi|134109641|ref|XP_776499.1| hypothetical protein CNBC4250 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259177|gb|EAL21852.1| hypothetical protein CNBC4250 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1089
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/209 (36%), Positives = 116/209 (55%), Gaps = 12/209 (5%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + +F S FY+G L + + L V + PV +FF G E
Sbjct: 680 LQVQYRMHPCLSEFSSNLFYEGTLQNGVTAPERLRKHVDFPWPVADTPMFFHQNLGTEEI 739
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
S+ N EA + + + K KS G+ +G+ITPY+ Q + + L+
Sbjct: 740 SSSGTSFLNRTEAS---NVEKMVTKFFKS-GVLPNQIGVITPYEGQRSYIASYMQ--LHG 793
Query: 122 EEGKDLY----INTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALW 176
KDLY + +VDAFQG+E+D II+SCVR++ H G+GF+ D RR+NVALTRA+ +
Sbjct: 794 SLKKDLYKEVEVASVDAFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAKYGVV 853
Query: 177 VMGNAGALTQSDDWAALIADSKARNCYMD 205
++GN L++ W L++ K + C+++
Sbjct: 854 ILGNPKVLSKHPLWLYLLSHYKEKGCFVE 882
>gi|321479359|gb|EFX90315.1| hypothetical protein DAPPUDRAFT_309786 [Daphnia pulex]
Length = 1738
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/207 (35%), Positives = 121/207 (58%), Gaps = 20/207 (9%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVI-NLPDEVYYKDPVLRPYVFFDVIHGRE 59
M+L+ QYRM P I ++PS++FY G+L +E +I N P Y+ Y +VI G E
Sbjct: 1521 MMLNTQYRMAPSICEWPSKYFYGGKLVTAEGLIRNGP---CYE------YRVLNVIDGLE 1571
Query: 60 SHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVL 119
+ S++N EA + + + + G +VG+IT Y+ Q +C+ + +
Sbjct: 1572 --QLADQSFKNEKEATLVAKIVMLIVNSPLTRG---KSVGVITFYRSQQQCIVKKMTEEV 1626
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRA---SNHG--VGFVADIRRMNVALTRARRA 174
N + +NTVD+FQG+E+D++I+SCVRA N G +GFV+ ++RMNVA+TRA+ +
Sbjct: 1627 NRINASRVEVNTVDSFQGREKDIVIVSCVRAREVRNLGGDIGFVSSLQRMNVAMTRAKES 1686
Query: 175 LWVMGNAGALTQSDDWAALIADSKARN 201
L V G+ L ++ W LI ++++R+
Sbjct: 1687 LIVCGHFQTLQMNETWQDLINNARSRD 1713
>gi|169852646|ref|XP_001833005.1| ATP dependent helicase [Coprinopsis cinerea okayama7#130]
gi|116505799|gb|EAU88694.1| ATP dependent helicase [Coprinopsis cinerea okayama7#130]
Length = 1079
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/207 (35%), Positives = 116/207 (56%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + +FPS FY+G L + + L V + PV +FF G+E
Sbjct: 671 LQVQYRMHPCLSEFPSNMFYEGSLQNGVTAPERLRKNVDFPWPVPDTPMFFYQNLGQEEI 730
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
S+ N EA + + + K KS G+ +G++TPY+ Q + + +F L
Sbjct: 731 SSSGTSFLNRTEAS---NVEKIVTKFFKS-GVVPNQIGVVTPYEGQRSYIVNYMQFNGSL 786
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+ K++ + +VDAFQG+E+D II+SCVR++ H G+GF+ D RR+NVALTRA+ + ++
Sbjct: 787 KKDLYKEIEVASVDAFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAKYGVVIL 846
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN L++ W L+ K N ++
Sbjct: 847 GNPKVLSKHPLWHYLLTHYKESNVLVE 873
>gi|147842150|emb|CAN62644.1| hypothetical protein VITISV_039594 [Vitis vinifera]
Length = 1003
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/207 (38%), Positives = 114/207 (55%), Gaps = 7/207 (3%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDE-VYYKDPVLRPYVFFDVIHGRES 60
LL++QYRMHP I FP+R FY + D+ +V E Y + Y F +V +G+E
Sbjct: 609 LLNLQYRMHPSISLFPNREFYDNLILDAPNVKERKYERSYLHGNMYGSYSFINVAYGKEE 668
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEF-RNVL 119
S +N+ E + L K K +V+VGII+PYK Q+ +Q +
Sbjct: 669 F-DYRYSTRNMVEVVVVSEMVATLAKATKGRK-QRVSVGIISPYKAQVYAIQDRLGKKYT 726
Query: 120 NSEEGK-DLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWV 177
+S +GK + + +VD FQG E D+II+S VR + G VGF+++ +R NVALTRAR LW+
Sbjct: 727 SSADGKFSVSVRSVDGFQGGEEDIIIISTVRCNLKGSVGFISNRQRTNVALTRARYCLWI 786
Query: 178 MGNAGALTQSDD-WAALIADSKARNCY 203
GN L S W L+ D+K R C+
Sbjct: 787 FGNGPTLEHSGTVWGKLVNDAKDRGCF 813
>gi|302143704|emb|CBI22565.3| unnamed protein product [Vitis vinifera]
Length = 960
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/207 (38%), Positives = 114/207 (55%), Gaps = 7/207 (3%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDE-VYYKDPVLRPYVFFDVIHGRES 60
LL++QYRMHP I FP+R FY + D+ +V E Y + Y F +V +G+E
Sbjct: 566 LLNLQYRMHPSISLFPNREFYDNLILDAPNVKERKYERSYLHGNMYGSYSFINVAYGKEE 625
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEF-RNVL 119
S +N+ E + L K K +V+VGII+PYK Q+ +Q +
Sbjct: 626 F-DYRYSTRNMVEVVVVSEMVATLAKATKGRK-QRVSVGIISPYKAQVYAIQDRLGKKYT 683
Query: 120 NSEEGK-DLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWV 177
+S +GK + + +VD FQG E D+II+S VR + G VGF+++ +R NVALTRAR LW+
Sbjct: 684 SSADGKFSVSVRSVDGFQGGEEDIIIISTVRCNLKGSVGFISNRQRTNVALTRARYCLWI 743
Query: 178 MGNAGALTQSDD-WAALIADSKARNCY 203
GN L S W L+ D+K R C+
Sbjct: 744 FGNGPTLEHSGTVWGKLVNDAKDRGCF 770
>gi|255732109|ref|XP_002550978.1| ATP-dependent helicase NAM7 [Candida tropicalis MYA-3404]
gi|240131264|gb|EER30824.1| ATP-dependent helicase NAM7 [Candida tropicalis MYA-3404]
Length = 993
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/216 (36%), Positives = 122/216 (56%), Gaps = 14/216 (6%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDS-ESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + +FPS FY+G L + S L ++ + PV+ + F +GRE
Sbjct: 657 LEVQYRMHPCLSEFPSNMFYEGSLQNGVTSDDRLIEDSTFPWPVIDTPMMFWANYGREEL 716
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
SY N EA E + L G+ +G+ITPY+ Q L +F ++ ++
Sbjct: 717 SASGNSYLNRVEAMN----VEKIITKLFKDGIQPEQIGVITPYEGQRAYLV-QFMSMNST 771
Query: 122 EEGK-----DLYINTVDAFQGQERDVIIMSCVRASN-HGVGFVADIRRMNVALTRARRAL 175
K D+ I +VDAFQG+E+D II+SCVRA++ +GF++D RR+NVALTR++ L
Sbjct: 772 LLDKRDQYLDVEITSVDAFQGREKDYIILSCVRANDSQSIGFLSDPRRLNVALTRSKYGL 831
Query: 176 WVMGNAGALTQSDDWAALIADSKARNCYMD--MDSL 209
++GN AL ++ W L+ + + C +D +D+L
Sbjct: 832 IILGNPRALCRNRLWNHLLIHFREKGCLVDGPLDNL 867
>gi|145499757|ref|XP_001435863.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124402999|emb|CAK68466.1| unnamed protein product [Paramecium tetraurelia]
Length = 928
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 126/236 (53%), Gaps = 17/236 (7%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDP-VLRPYVFFDVIHGRESH 61
L VQYRMHP + FPS FY+G L + ++ + + P +P +F +V G+E
Sbjct: 602 LQVQYRMHPELTVFPSNTFYEGTLQNGVTISDRTHSGNFPWPNKQKPMIFINV-QGQEQL 660
Query: 62 RGGSVSYQNVDEA-KFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLK-CLQHEFRN-V 118
SY N EA +Y Q T+K L K +GIITPYK Q + + RN
Sbjct: 661 SASGTSYLNTQEAVAVEQAVYYLYQNTVK---LNK--IGIITPYKGQRTYIISYLQRNGQ 715
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASN-HGVGFVADIRRMNVALTRARRALWV 177
L + +D+ + +VD FQG+E+D II+SCVR+++ G+GF+ + RR+NV +TRAR L +
Sbjct: 716 LPYNQYRDIEVASVDGFQGREKDFIIISCVRSNDTQGIGFLTNPRRLNVTITRARFGLII 775
Query: 178 MGNAGALTQSDDWAALIADSKARNCYMDMDSLPKEFSVALAAKAPGYGPLQGKIPH 233
+GNA L + + W ++ N + D+D L + L + + P Q IP
Sbjct: 776 IGNARVLCKDNLWNNML------NHFKDLDLLMEGSLPNLKPSSMKFRPPQKFIPE 825
>gi|359490550|ref|XP_002266964.2| PREDICTED: uncharacterized protein LOC100244982 [Vitis vinifera]
Length = 1076
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/207 (38%), Positives = 114/207 (55%), Gaps = 7/207 (3%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDE-VYYKDPVLRPYVFFDVIHGRES 60
LL++QYRMHP I FP+R FY + D+ +V E Y + Y F +V +G+E
Sbjct: 710 LLNLQYRMHPSISLFPNREFYDNLILDAPNVKERKYERSYLHGNMYGSYSFINVAYGKEE 769
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEF-RNVL 119
S +N+ E + L K K +V+VGII+PYK Q+ +Q +
Sbjct: 770 F-DYRYSTRNMVEVVVVSEMVATLAKATKGRK-QRVSVGIISPYKAQVYAIQDRLGKKYT 827
Query: 120 NSEEGK-DLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWV 177
+S +GK + + +VD FQG E D+II+S VR + G VGF+++ +R NVALTRAR LW+
Sbjct: 828 SSADGKFSVSVRSVDGFQGGEEDIIIISTVRCNLKGSVGFISNRQRTNVALTRARYCLWI 887
Query: 178 MGNAGALTQSDD-WAALIADSKARNCY 203
GN L S W L+ D+K R C+
Sbjct: 888 FGNGPTLEHSGTVWGKLVNDAKDRGCF 914
>gi|302306557|ref|NP_982968.4| ABR022Cp [Ashbya gossypii ATCC 10895]
gi|299788573|gb|AAS50792.4| ABR022Cp [Ashbya gossypii ATCC 10895]
gi|374106171|gb|AEY95081.1| FABR022Cp [Ashbya gossypii FDAG1]
Length = 999
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 118/215 (54%), Gaps = 14/215 (6%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLRPYVFFDVIHGRESH 61
L VQYRM+P++ +FPS FY+G L + +V + + P+ + F +GRE
Sbjct: 642 LEVQYRMNPYLSEFPSNMFYEGTLQNGVTVEQRTVVDSSFPWPICDIPMMFWANYGREEI 701
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
SY N EA E + L G+ +G++TPY+ Q + + +N
Sbjct: 702 SANGTSYLNRIEA----INCERIITRLFKDGVKPEQIGVVTPYEGQRAYIIQYMQ--MNG 755
Query: 122 EEGKDLYIN----TVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALW 176
KDLY+ +VDAFQG+E+D II+SCVRA++ +GF+ D RR+NVALTRA+ L
Sbjct: 756 SMDKDLYMTVEVASVDAFQGREKDYIILSCVRANDQQSIGFLTDPRRLNVALTRAKYGLA 815
Query: 177 VMGNAGALTQSDDWAALIADSKARNCYMD--MDSL 209
++GN +L ++ W L+ + + C ++ MD+L
Sbjct: 816 ILGNPASLCRNSIWNHLLIHFREKGCLVEGTMDNL 850
>gi|50303751|ref|XP_451821.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640953|emb|CAH02214.1| KLLA0B06435p [Kluyveromyces lactis]
Length = 969
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 86/252 (34%), Positives = 137/252 (54%), Gaps = 22/252 (8%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLRPYVFFDVIHGRESH 61
L VQYRM+P + +FPS FY+G L + ++ + P+ + F +GRE
Sbjct: 632 LEVQYRMNPQLSEFPSNMFYEGSLQNGVTIEQRTIARSTFPWPIHTIPMMFWANYGREEI 691
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
G SY N EA C E + L G+ +G+ITPY+ Q + + +N
Sbjct: 692 SGNGTSYLNRIEAMN--C--EKIITRLFKDGVKPEQIGVITPYEGQRAYVVQYMQ--MNG 745
Query: 122 EEGKDLY----INTVDAFQGQERDVIIMSCVRASN-HGVGFVADIRRMNVALTRARRALW 176
K LY + +VDAFQG+E+D II+SCVRA+ + +GF++D RR+NVALTRA+ L
Sbjct: 746 SMEKSLYMGVEVASVDAFQGREKDYIILSCVRANERNTIGFLSDPRRLNVALTRAKYGLI 805
Query: 177 VMGNAGALTQSDDWAALIADSKARNCYMD--MDSLPKEFSVALA--AKAPGYGPLQGKIP 232
++GN AL+++ W+ L+ + + C ++ +D+L + +V L ++AP P
Sbjct: 806 ILGNPRALSRNSLWSHLLLHFREKGCLVEGFLDNL-QLCTVQLTKPSRAPRKAP-----S 859
Query: 233 HNARGLRSAGQR 244
+N+ + AGQR
Sbjct: 860 NNSSYTQYAGQR 871
>gi|164659902|ref|XP_001731075.1| hypothetical protein MGL_2074 [Malassezia globosa CBS 7966]
gi|159104973|gb|EDP43861.1| hypothetical protein MGL_2074 [Malassezia globosa CBS 7966]
Length = 1019
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 82/210 (39%), Positives = 115/210 (54%), Gaps = 14/210 (6%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLR-PYVFFDVIHGRES 60
L VQYRMHP + +FPS FY G L + S L V PV P +F+ + G+E
Sbjct: 674 LEVQYRMHPALSEFPSNMFYDGMLQNGVSAHERLRRNVAIPWPVPNMPMMFYQNL-GQEE 732
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
SY N EA E L TL G+ +G++TPY+ Q + + + L+
Sbjct: 733 ISASGTSYLNRTEASS----VEKLVTTLLKAGVAAEHIGVVTPYEGQRNFVINYMQ--LH 786
Query: 121 SEEGKDLYIN----TVDAFQGQERDVIIMSCVRA-SNHGVGFVADIRRMNVALTRARRAL 175
KD Y N +VDAFQG+E+D II+SCVR+ S+ G+GF++D RR+NVALTRAR L
Sbjct: 787 GSMMKDAYRNVEVASVDAFQGREKDYIIVSCVRSNSSLGIGFLSDPRRLNVALTRARFGL 846
Query: 176 WVMGNAGALTQSDDWAALIADSKARNCYMD 205
++GN L ++ W L+ K RN ++
Sbjct: 847 ILIGNPRILCKNPLWYHLLVHFKDRNLLVE 876
>gi|301092662|ref|XP_002997185.1| nonsense transcript regulator [Phytophthora infestans T30-4]
gi|262111572|gb|EEY69624.1| nonsense transcript regulator [Phytophthora infestans T30-4]
Length = 687
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 76/210 (36%), Positives = 114/210 (54%), Gaps = 14/210 (6%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTD----SESVINLPDEVYYKDPVLRPYVFFDVIHGR 58
L VQYRMHP + +FPS FY+G L + SE ++ V + P FF + G
Sbjct: 333 LRVQYRMHPFLSEFPSNEFYEGDLQNGVAASERQLS---SVDFPWPNPNKPTFFYICLGA 389
Query: 59 ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLK-CLQHEFRN 117
E SY N EA E + T G+ +G+ITPY+ Q + + RN
Sbjct: 390 EEISSSGTSYLNRTEASN----VEKIVTTFLKAGVLPSQIGVITPYEGQRAYVVSYMQRN 445
Query: 118 -VLNSEEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRAL 175
L S+ KD+ + +VD+FQG+E+D+II+SCVR++ N G+GF++D RR+NVALTRA+ +
Sbjct: 446 GPLRSQLYKDVEVASVDSFQGREKDLIILSCVRSNENQGIGFLSDERRLNVALTRAKYGV 505
Query: 176 WVMGNAGALTQSDDWAALIADSKARNCYMD 205
++GN L + W L+ + M+
Sbjct: 506 ILLGNPRVLAKQTLWNKLLNHYRDNQLIME 535
>gi|113722131|ref|NP_932150.2| probable helicase senataxin [Mus musculus]
gi|160184873|sp|A2AKX3.1|SETX_MOUSE RecName: Full=Probable helicase senataxin; AltName: Full=Amyotrophic
lateral sclerosis 4 protein homolog; AltName: Full=SEN1
homolog
gi|225356476|gb|AAI56404.1| Senataxin [synthetic construct]
Length = 2646
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 73/207 (35%), Positives = 118/207 (57%), Gaps = 21/207 (10%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQ-----GRLTDSESVINLPDEVYYKDPVLRPYVFFDVI 55
+ L++QYRMHP I FPS + Y RLT+S I E ++ PY+ FDV
Sbjct: 2228 LQLTIQYRMHPDICLFPSNYVYNKNLKTNRLTES---IRCSSEWPFQ-----PYLVFDV- 2278
Query: 56 HGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEF 115
G S R + SY NV E K + + + +++ K + +GIIT YK Q +Q +
Sbjct: 2279 -GDGSERRDNDSYINVQEIKLVMEIIKLIKEKRKDISFR--NIGIITHYKAQKTMIQKDL 2335
Query: 116 RNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRAS--NHGVGFVADIRRMNVALTRARR 173
+ + + ++TVDAFQG+++D II++CVRAS +GF+A ++R+NV +TRA+
Sbjct: 2336 EKEFDKKGPAE--VDTVDAFQGRQKDCIIVTCVRASAVQGSIGFLASLQRLNVTITRAKY 2393
Query: 174 ALWVMGNAGALTQSDDWAALIADSKAR 200
+L+++G+ L ++ W LI D++ R
Sbjct: 2394 SLFILGHLRTLMENQHWYELIQDAQKR 2420
>gi|145350386|ref|XP_001419588.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579820|gb|ABO97881.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 797
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 112/207 (54%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLP-DEVYYKDPVLRPYVFFDVIHGRESH 61
L +QYRMHP + +FPS FY G L + S I + + PV + F G+E
Sbjct: 584 LQIQYRMHPCLSEFPSNTFYDGTLQNGVSAIERTLSHIDFPWPVPSKPMMFWSQTGQEEM 643
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLK-CLQHEFR-NVL 119
S+ N EA E L + G+ +G++TPY+ Q +QH R VL
Sbjct: 644 SASGTSFLNRAEAS----AVEKCVTHLLNAGVSPEQIGVVTPYEGQRAYVVQHMTRVGVL 699
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+ + KD+ + +VD+FQG+E+D IIM+CVR++ G+GF++D RR+NVA+TRAR L V+
Sbjct: 700 HPQLYKDIQVASVDSFQGKEKDFIIMTCVRSNEKSGIGFLSDPRRLNVAITRARSGLIVI 759
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN L + + ++ + C ++
Sbjct: 760 GNPKVLNKQHLFHEMLTHFRENGCLVE 786
>gi|42475934|tpg|DAA01946.1| TPA_exp: senataxin [Mus musculus]
Length = 2646
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 73/207 (35%), Positives = 118/207 (57%), Gaps = 21/207 (10%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQ-----GRLTDSESVINLPDEVYYKDPVLRPYVFFDVI 55
+ L++QYRMHP I FPS + Y RLT+S I E ++ PY+ FDV
Sbjct: 2228 LQLTIQYRMHPDICLFPSNYVYNKNLKTNRLTES---IRCSSEWPFQ-----PYLVFDV- 2278
Query: 56 HGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEF 115
G S R + SY NV E K + + + +++ K + +GIIT YK Q +Q +
Sbjct: 2279 -GDGSERRDNDSYINVQEIKLVMEIIKLIKEKRKDISFR--NIGIITHYKAQKTMIQKDL 2335
Query: 116 RNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRAS--NHGVGFVADIRRMNVALTRARR 173
+ + + ++TVDAFQG+++D II++CVRAS +GF+A ++R+NV +TRA+
Sbjct: 2336 EKEFDKKGPAE--VDTVDAFQGRQKDCIIVTCVRASAVQGSIGFLASLQRLNVTITRAKY 2393
Query: 174 ALWVMGNAGALTQSDDWAALIADSKAR 200
+L+++G+ L ++ W LI D++ R
Sbjct: 2394 SLFILGHLRTLMENQHWYELIQDAQKR 2420
>gi|333038075|gb|AEF13567.1| hypothetical protein PICST_73544 [Scheffersomyces stipitis CBS
6054]
Length = 1021
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 119/220 (54%), Gaps = 22/220 (10%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDS-ESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
L VQYRM+P + +FPS FY+G L + S + + PV + F +GRE
Sbjct: 661 LEVQYRMNPCLSEFPSNIFYEGSLQNGVTSAQRRIESSTFPWPVYDSPMMFWANYGREEI 720
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYK---------LQLKCLQ 112
G SY N EA E + L G+ +G+ITPY+ + +
Sbjct: 721 SGSGNSYLNRVEAMN----VEKIITRLFKDGVKAEQIGVITPYEGQRAYLVSYMSINSTL 776
Query: 113 HEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRA-SNHGVGFVADIRRMNVALTRA 171
EF+ E+ ++ + +VDAFQG+E+D II+SCVRA S+H +GF++D RR+NVALTRA
Sbjct: 777 AEFK-----EQYLEVEVTSVDAFQGREKDYIILSCVRANSSHQIGFLSDPRRLNVALTRA 831
Query: 172 RRALWVMGNAGALTQSDDWAALIADSKARNCYMD--MDSL 209
+ L V+GN AL ++ W L+ + + C +D +D+L
Sbjct: 832 KYGLVVLGNPRALCRNRLWNQLLIHFREKGCLVDGPLDNL 871
>gi|19113992|ref|NP_593080.1| ATP-dependent RNA helicase Upf1 [Schizosaccharomyces pombe 972h-]
gi|19924241|sp|Q09820.2|RENT1_SCHPO RecName: Full=ATP-dependent helicase upf1; AltName:
Full=Nonsense-mediated mRNA decay protein upf1; AltName:
Full=Regulator of nonsense transcripts 1 homolog;
AltName: Full=Up-frameshift suppressor 1
gi|4894186|emb|CAA91194.2| ATP-dependent RNA helicase Upf1 [Schizosaccharomyces pombe]
Length = 925
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 86/228 (37%), Positives = 119/228 (52%), Gaps = 23/228 (10%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRL----TDSESVINLPDEVYYK-DPVLRPYVFFDVIHG 57
L VQYRMHP + +FPS FY+G L T SE + D + + D L Y F G
Sbjct: 626 LVVQYRMHPCLSEFPSNTFYEGTLQNGVTTSERIARHVDFPWIQPDSPLMFYANF----G 681
Query: 58 RESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRN 117
+E S+ N EA C E + T + +GI+TPY Q + +N
Sbjct: 682 QEELSASGTSFLNRTEA--STC--EKIVTTFLRSNVLPEQIGIVTPYDGQRSYIVQYMQN 737
Query: 118 VLNSEEGKDLY----INTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRAR 172
N KDLY + +VDAFQG+E+D II+SCVR+S H G+GFV D RR+NVALTRA+
Sbjct: 738 --NGSMQKDLYKAVEVASVDAFQGREKDFIILSCVRSSEHQGIGFVNDPRRLNVALTRAK 795
Query: 173 RALWVMGNAGALTQSDDWAALIADSKARNCYMD--MDSLPKEFSVALA 218
+ V+GN L + W + K + ++ ++SL K FS+ L
Sbjct: 796 YGVIVLGNPKVLAKHALWYHFVLHCKEKGYLVEGTLNSLQK-FSLTLT 842
>gi|294657547|ref|XP_002770466.1| DEHA2E12430p [Debaryomyces hansenii CBS767]
gi|199432775|emb|CAR65809.1| DEHA2E12430p [Debaryomyces hansenii CBS767]
Length = 985
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 79/215 (36%), Positives = 117/215 (54%), Gaps = 12/215 (5%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLRPYVFFDVIHGRESH 61
L VQYRM+P + +FPS FY+G L + + L + + PVL + F +GRE
Sbjct: 659 LEVQYRMNPCLSEFPSNMFYEGSLQNGVTAKQRLIENSIFPWPVLDNPMMFWANYGREEI 718
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
G S+ N EA E + L G+ +G+ITPY+ Q +
Sbjct: 719 SGSGNSFLNRVEAMN----VEKIITKLFKDGIEPSQIGVITPYEGQRAYIVQYMSMNSTL 774
Query: 122 EEGKDLY----INTVDAFQGQERDVIIMSCVRASNHGV-GFVADIRRMNVALTRARRALW 176
E K+ Y I +VDAFQG+E+D II+SCVRA++ V GF++D RR+NVALTRA+ L
Sbjct: 775 TELKEKYLEVEITSVDAFQGREKDFIILSCVRANDSQVIGFLSDPRRLNVALTRAKYGLV 834
Query: 177 VMGNAGALTQSDDWAALIADSKARNCYMD--MDSL 209
++GN AL ++ W L+ + + C +D +D+L
Sbjct: 835 ILGNPRALCRNTLWNHLLIHFREKGCLVDGSLDNL 869
>gi|402466738|gb|EJW02168.1| hypothetical protein EDEG_03389 [Edhazardia aedis USNM 41457]
Length = 1260
Score = 117 bits (294), Expect = 7e-24, Method: Composition-based stats.
Identities = 79/210 (37%), Positives = 113/210 (53%), Gaps = 15/210 (7%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDP--VLRPYVFFDVIHGRE 59
+L QYRM I FP+ FY+ +L + + K P +L + F I G E
Sbjct: 1053 ILKTQYRMTSDIVAFPNLQFYRNQLITPKFLEQ------RKGPFALLLKSISFINIQGTE 1106
Query: 60 SHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVL 119
+G + S+ NV E K V + +L + L K +GII+PYK Q+ + E+R +
Sbjct: 1107 K-QGDTNSFYNVKEEKAIVRIVNYLASKIH---LNK-NIGIISPYKKQILHIIEEYRKIC 1161
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMG 179
+ + INTVDAFQGQE+D+II+S VR+ +GFV DIRR+NVALTRAR + ++G
Sbjct: 1162 KANLTDLVEINTVDAFQGQEKDIIILSTVRSEK--LGFVLDIRRLNVALTRARFNIIILG 1219
Query: 180 NAGALTQSDDWAALIADSKARNCYMDMDSL 209
NA L W ALI K + + + D
Sbjct: 1220 NANLLETDKTWKALIQFYKDKKAFYEEDQF 1249
>gi|390945185|ref|YP_006408946.1| type III restriction enzyme, res subunit [Belliella baltica DSM
15883]
gi|390418613|gb|AFL86191.1| Type III restriction enzyme, res subunit [Belliella baltica DSM
15883]
Length = 643
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 72/205 (35%), Positives = 121/205 (59%), Gaps = 20/205 (9%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
+L+VQYRM I F S+ FY+ L E+ +N ++ + ++ E
Sbjct: 429 MLTVQYRMPEKIMGFSSKLFYKNNL---EAAVNTHIHFLTEEESVLEFIDTAGSGFSEHQ 485
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKV-----TVGIITPYKLQLKCLQ---- 112
S+S N +EAKF + ++L+ LK +G+GK+ +G+I+PY+ Q++ Q
Sbjct: 486 EKESLSTLNAEEAKFTL---KYLENLLKRVGIGKIKTEGWNIGLISPYRAQVRKFQELIF 542
Query: 113 --HEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALT 169
+E+ N+ + E L I+++D FQGQERD+I +S VR++ +G +GF++D RRMNVALT
Sbjct: 543 ESYEYPNLRSFSEL--LTIDSIDGFQGQERDIIFISLVRSNANGEIGFLSDTRRMNVALT 600
Query: 170 RARRALWVMGNAGALTQSDDWAALI 194
RA+R L V+G++ L+ +D + A +
Sbjct: 601 RAKRKLVVIGDSSTLSSNDFYNAFL 625
>gi|159487559|ref|XP_001701790.1| UPF1 protein [Chlamydomonas reinhardtii]
gi|158281009|gb|EDP06765.1| UPF1 protein [Chlamydomonas reinhardtii]
Length = 800
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 77/215 (35%), Positives = 116/215 (53%), Gaps = 24/215 (11%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESV-------INLPDEVYYKDPVLRPYVFFDVI 55
L VQYRMHP + +FPS FY+G L + + ++ P + +P +P +F+ V
Sbjct: 579 LQVQYRMHPCLSEFPSNTFYEGTLQNGTGMGERRLAGVDFP----WPNPD-KPMMFW-VQ 632
Query: 56 HGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEF 115
G E S SY N EA E + G+ +G+ITPY+ Q +
Sbjct: 633 LGAEEISASSTSYLNRTEA----AAVEKVVTRFLQNGMSPAQIGVITPYEGQRAHVVSVM 688
Query: 116 RNVLNSEEGKDLY----INTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTR 170
V N +DLY +++VDAFQG+E+D+I++SCVR++ H +GF++D RR+NVALTR
Sbjct: 689 --VRNGTARQDLYKEIEVSSVDAFQGREKDIIVLSCVRSNEHSSIGFLSDPRRLNVALTR 746
Query: 171 ARRALWVMGNAGALTQSDDWAALIADSKARNCYMD 205
AR L V+GN L++ W +L+ K C +
Sbjct: 747 ARFGLVVLGNPRVLSRQPLWNSLLQYFKEHGCLAE 781
>gi|82915224|ref|XP_729015.1| nonsense mRNA reducing factor 1 [Plasmodium yoelii yoelii 17XNL]
gi|23485801|gb|EAA20580.1| nonsense mRNA reducing factor 1-related [Plasmodium yoelii yoelii]
Length = 1297
Score = 117 bits (294), Expect = 7e-24, Method: Composition-based stats.
Identities = 72/189 (38%), Positives = 108/189 (57%), Gaps = 12/189 (6%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY----YKDPVLRPYVFFDVIHGR 58
L VQYRMHP + +FPS FY G L + I L + Y + P + +FF +G
Sbjct: 896 LEVQYRMHPCLSEFPSYVFYDGCLQNG---ITLKEREYPLKNFPWPNSKYPMFFYNSNGL 952
Query: 59 ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV 118
E SY N +EA+ E L + L + GL +G+ITPY+ Q + F+
Sbjct: 953 EEMSASGTSYLNRNEAQN----MEVLVRALLNAGLKATQIGVITPYEGQRAYITSLFQKN 1008
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWV 177
++ + D+ + +VDAFQG+E+D I++SCVR++ G+GF+ D RR+NVALTRA+ L +
Sbjct: 1009 ISYQHCLDIEVASVDAFQGREKDFILLSCVRSNKKLGIGFLNDPRRLNVALTRAKYGLII 1068
Query: 178 MGNAGALTQ 186
GNA L++
Sbjct: 1069 CGNAKVLSR 1077
>gi|401882761|gb|EJT47005.1| hypothetical protein A1Q1_04248 [Trichosporon asahii var. asahii CBS
2479]
Length = 1986
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 74/207 (35%), Positives = 110/207 (53%), Gaps = 30/207 (14%)
Query: 5 VQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESHRGG 64
+QYRMHP I PS+ FY RL D + V++K P+ PY F +V +G ES G
Sbjct: 1650 IQYRMHPEISVLPSKVFYDSRLKDGPDMDKKTVAVWHKKPIFGPYHFINV-NGVESKAG- 1707
Query: 65 SVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNSEEG 124
+S +N +EA+ V L+ +L++ S ++ VG+IT Y+ QL L+ F+
Sbjct: 1708 -MSTKNTEEAQVAVDLFRNLKQQFGSRVNLEMRVGVITMYREQLNELKRRFQ-------- 1758
Query: 125 KDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGNAGAL 184
DAF Q D I +GF+ D RRMNVALTRA+ +L+V+GNA L
Sbjct: 1759 --------DAFGRQILDTI----------DIGFLRDFRRMNVALTRAKSSLFVIGNAATL 1800
Query: 185 TQSD-DWAALIADSKARNCYMDMDSLP 210
+SD W +++D++ R +D + P
Sbjct: 1801 ERSDAKWKTIVSDARDRGLLIDPNVPP 1827
>gi|348570176|ref|XP_003470873.1| PREDICTED: probable helicase senataxin-like [Cavia porcellus]
Length = 2661
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 113/200 (56%), Gaps = 11/200 (5%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESHR 62
L+VQYRMHP I FPS + Y L + S ++ D +PY+ FDV G E R
Sbjct: 2238 LTVQYRMHPDICLFPSNYIYNKSLKTNRSTESI---RCSSDWPFQPYLVFDVSDGSE--R 2292
Query: 63 GGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNSE 122
+ SY N E K + + + ++ K + +GIIT YK Q LQ + + +
Sbjct: 2293 RDNDSYVNAQEIKLVMEIVKLIKDKKKEINFR--NIGIITHYKAQKTMLQKDLDREFDRK 2350
Query: 123 EGKDLYINTVDAFQGQERDVIIMSCVRASNH--GVGFVADIRRMNVALTRARRALWVMGN 180
+ ++TVDAFQG+++D II++CVRA+ +GF+A ++R+NV +TRA+ +L+++G+
Sbjct: 2351 GPAE--VDTVDAFQGRQKDCIIVTCVRANTAQGSIGFLASLQRLNVTITRAKYSLFILGH 2408
Query: 181 AGALTQSDDWAALIADSKAR 200
L ++ W LI D++ R
Sbjct: 2409 LRTLMENQHWNELIQDAQKR 2428
>gi|407400115|gb|EKF28555.1| regulator of nonsense transcripts 1, putative,nonsense mRNA
reducing factor 1, putative [Trypanosoma cruzi
marinkellei]
Length = 839
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 81/202 (40%), Positives = 113/202 (55%), Gaps = 18/202 (8%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTD--SESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
L VQYRMHP + FPS FY+G L + +E + + DP RP F++ E
Sbjct: 614 LDVQYRMHPALSLFPSDQFYEGTLQNGLTEEQRDASQVFPWPDPT-RPIFFYNTTGSEEV 672
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVT---VGIITPYKLQLKCLQHEFRN 117
GS SY N EA L E + K + GKV +G+ITPY Q + L +
Sbjct: 673 SANGS-SYLNRAEAA----LTERI--ITKLIQDGKVKPDDIGVITPYGGQCRYLMNYLLR 725
Query: 118 V--LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH--GVGFVADIRRMNVALTRARR 173
L + + +++VDAFQG+E++ II+SCVR SNH G+GFV D RR+NV++TRA+R
Sbjct: 726 CGPLPKTAYESVEVSSVDAFQGREKEFIILSCVR-SNHRQGIGFVVDWRRLNVSITRAKR 784
Query: 174 ALWVMGNAGALTQSDDWAALIA 195
L +MGN L++ W AL+A
Sbjct: 785 GLIIMGNVQLLSRYPVWHALLA 806
>gi|195435518|ref|XP_002065727.1| GK19858 [Drosophila willistoni]
gi|194161812|gb|EDW76713.1| GK19858 [Drosophila willistoni]
Length = 1890
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 74/205 (36%), Positives = 109/205 (53%), Gaps = 17/205 (8%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESHR 62
LS+QYRMHP I +P+R+FY+ +L DS P + L PY ++ ++++
Sbjct: 1676 LSMQYRMHPEICRWPNRYFYEDQLVDS------PCALRRTQSPLIPYCVINLSFTQDTNC 1729
Query: 63 GGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNSE 122
S S N DEA+F L + K M K G+I+PY Q L L
Sbjct: 1730 INSRSVSNNDEARFVANLLIEMD---KHMSTKKYGYGLISPYSSQCYALSE-----LIPA 1781
Query: 123 EGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGNAG 182
E K + TVD++QG E+D+I++S R G GF+ + +R+NVALTRA+R L + GN
Sbjct: 1782 EMK-IIPTTVDSYQGTEKDIIVISNART--RGCGFLTNYQRLNVALTRAKRCLIICGNFD 1838
Query: 183 ALTQSDDWAALIADSKARNCYMDMD 207
L D W AL+ D++ R Y D++
Sbjct: 1839 DLQSVDMWRALLNDARDRGVYFDLE 1863
>gi|375146785|ref|YP_005009226.1| ATPase AAA [Niastella koreensis GR20-10]
gi|361060831|gb|AEV99822.1| ATPase AAA [Niastella koreensis GR20-10]
Length = 633
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 75/210 (35%), Positives = 116/210 (55%), Gaps = 15/210 (7%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
+LL QYRMH I + S FY RL SV V + + P VF D
Sbjct: 424 VLLEEQYRMHEMIMGYSSSTFYDDRLKAHASVAR---HVLFSND--NPLVFVDTAGCGFD 478
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGL-----GKVTVGIITPYKLQLKCLQHEF 115
+ S N +EA F L+ HL + + S+ ++ II+PYK Q+ L+ +F
Sbjct: 479 EKTEQTSTYNPEEAAF---LFRHLTQLVSSLDSHYKPENFPSIAIISPYKQQIDTLKQQF 535
Query: 116 RNVLNSEE-GKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARR 173
+ + G + INT+D+FQGQERD++ +S R++ ++ +GF++DIRRMNVA+TRAR+
Sbjct: 536 LSSPALQAYGHKIAINTIDSFQGQERDIVYISMTRSNPDNRIGFLSDIRRMNVAMTRARK 595
Query: 174 ALWVMGNAGALTQSDDWAALIADSKARNCY 203
L V+G++ L+Q D + I+ ++ RN Y
Sbjct: 596 KLVVIGDSATLSQFDFYNNFISWAQDRNAY 625
>gi|194750317|ref|XP_001957574.1| GF10480 [Drosophila ananassae]
gi|190624856|gb|EDV40380.1| GF10480 [Drosophila ananassae]
Length = 1728
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 72/205 (35%), Positives = 111/205 (54%), Gaps = 19/205 (9%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESHR 62
LSVQYRMHP I +P+++FY+ +L + K L PY ++ + R+S
Sbjct: 1519 LSVQYRMHPEICRWPNKYFYEDQLVSAPCT--------EKSAALIPYSVINLSYTRDSST 1570
Query: 63 GGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNSE 122
+ S N +EA+F L +QK M + + G+I+PY Q L + +E
Sbjct: 1571 MSNRSISNDEEARFVAKLITAMQKL---MPTKRYSYGLISPYSNQCYALSQ-----VMTE 1622
Query: 123 EGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGNAG 182
+ K + T+DA+QG E+DVII+S R G GF+++ +R+NVALTR +R L + GN
Sbjct: 1623 DMKVTPL-TIDAYQGLEKDVIIISYART--RGCGFLSNYQRLNVALTRPKRCLVICGNFD 1679
Query: 183 ALTQSDDWAALIADSKARNCYMDMD 207
L D W L+ D++ RN Y D++
Sbjct: 1680 DLQSVDMWRQLLDDARQRNVYFDVE 1704
>gi|444316488|ref|XP_004178901.1| hypothetical protein TBLA_0B05540 [Tetrapisispora blattae CBS 6284]
gi|387511941|emb|CCH59382.1| hypothetical protein TBLA_0B05540 [Tetrapisispora blattae CBS 6284]
Length = 1056
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 79/216 (36%), Positives = 120/216 (55%), Gaps = 16/216 (7%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVI--NLPDEVYYKDPVLRPYVFFDVIHGRES 60
L VQYRM+P + +FPS FY+G L + ++ +P + P+ + F +GRE
Sbjct: 705 LEVQYRMNPFLSEFPSNMFYEGSLQNGVTLDQRTVPTSTF-PWPIHDVPMMFWANYGREE 763
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
SY N EA C E + L G+ +G+ITPY+ Q + + +N
Sbjct: 764 ISANGTSYLNRIEAMN--C--ERVITRLFKDGVKPEQIGVITPYEGQRAYILQYMQ--MN 817
Query: 121 SEEGKDLYIN----TVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRAL 175
KDLYIN +VDAFQG+E+D II+SCVRA+ +GF++D RRMNV LTRA+ L
Sbjct: 818 GTLDKDLYINVEVASVDAFQGREKDYIILSCVRANEQQAIGFLSDPRRMNVGLTRAKYGL 877
Query: 176 WVMGNAGALTQSDDWAALIADSKARNCYMD--MDSL 209
V+GN +L+++ W L+ + + C ++ +D+L
Sbjct: 878 VVLGNPRSLSRNILWNHLLIHFRQKGCLVEGSLDNL 913
>gi|68070943|ref|XP_677385.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56497484|emb|CAH99909.1| hypothetical protein PB000602.03.0 [Plasmodium berghei]
Length = 426
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 108/189 (57%), Gaps = 12/189 (6%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY----YKDPVLRPYVFFDVIHGR 58
L VQYRMHP + +FPS FY G L + I L + Y + P + +FF +G
Sbjct: 91 LEVQYRMHPCLSEFPSYVFYDGCLQNG---ITLKEREYPLKNFPWPNSKYPMFFYNSNGL 147
Query: 59 ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV 118
E SY N +EA+ E L + L + GL +G+ITPY+ Q + F+
Sbjct: 148 EEMSASGTSYLNRNEAQN----MEILVRALLNSGLKATQIGVITPYEGQRAYITSLFQKN 203
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWV 177
++ + D+ + +VDAFQG+E+D I++SCVR++ G+GF+ D RR+NVALTRA+ L +
Sbjct: 204 ISYQHCLDIEVASVDAFQGREKDFILLSCVRSNKKLGIGFLNDPRRLNVALTRAKYGLII 263
Query: 178 MGNAGALTQ 186
GNA L++
Sbjct: 264 CGNAKVLSR 272
>gi|406700589|gb|EKD03755.1| hypothetical protein A1Q2_01981 [Trichosporon asahii var. asahii CBS
8904]
Length = 1986
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/207 (35%), Positives = 109/207 (52%), Gaps = 30/207 (14%)
Query: 5 VQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESHRGG 64
+QYRMHP I PS+ FY RL D + V++K P+ PY F +V +G ES G
Sbjct: 1650 IQYRMHPEISVLPSKVFYDSRLKDGPDMDKKTVAVWHKKPIFGPYHFINV-NGVESKAG- 1707
Query: 65 SVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNSEEG 124
+S +N +EA+ V L+ +L++ S ++ VG+IT Y+ QL L+ F+
Sbjct: 1708 -MSTKNTEEAQVAVDLFRNLKQQFGSRVNLEMRVGVITMYREQLNELKRRFQ-------- 1758
Query: 125 KDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGNAGAL 184
DAF Q D I +GF+ D RRMNVALTRA+ +L+V+GNA L
Sbjct: 1759 --------DAFGRQILDTI----------DIGFLRDFRRMNVALTRAKSSLFVIGNAATL 1800
Query: 185 TQSD-DWAALIADSKARNCYMDMDSLP 210
+SD W ++ D++ R +D + P
Sbjct: 1801 ERSDAKWKTIVGDARDRGLLIDPNVPP 1827
>gi|395218587|ref|ZP_10402229.1| ATPase AAA [Pontibacter sp. BAB1700]
gi|394454278|gb|EJF08968.1| ATPase AAA [Pontibacter sp. BAB1700]
Length = 645
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/215 (36%), Positives = 116/215 (53%), Gaps = 17/215 (7%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHG--- 57
++L QYRMH HI F ++ FY G L ESV + E++ + P + + I
Sbjct: 425 VMLKTQYRMHHHIMQFSNQQFYGGELVAHESVHSA--ELHGYSTIFAPDMAVEFIDTAGC 482
Query: 58 --RESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMG---LGKVTVGIITPYKLQLKCLQ 112
E+ + S N +E G L HL LK + + +G+I PY+ Q+ LQ
Sbjct: 483 GYNEAEMPETQSSANPEE---GDLLINHLSNLLKDYDEEEVAPLKIGVIAPYRAQINYLQ 539
Query: 113 HEFRNVLNSEE---GKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVAL 168
+ + E + L I TVD+FQGQERD+I MS VR++ G +GF+AD RRMNVA+
Sbjct: 540 DKVEHTPRLHELHQKRQLSIGTVDSFQGQERDIICMSLVRSNERGEIGFLADERRMNVAM 599
Query: 169 TRARRALWVMGNAGALTQSDDWAALIADSKARNCY 203
TRARR L ++G++ L+ + +A LIA ++ Y
Sbjct: 600 TRARRKLIIVGDSSTLSTNPFFAELIAYVESIGAY 634
>gi|28386070|gb|AAH46382.1| Setx protein [Mus musculus]
Length = 902
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 117/205 (57%), Gaps = 21/205 (10%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQ-----GRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHG 57
L++QYRMHP I FPS + Y RLT+S I E ++ PY+ FDV G
Sbjct: 486 LTIQYRMHPDICLFPSNYVYNKNLKTNRLTES---IRCSSEWPFQ-----PYLVFDV--G 535
Query: 58 RESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRN 117
S R + SY NV E K + + + +++ K + +GIIT YK Q +Q +
Sbjct: 536 DGSERRDNDSYINVQEIKLVMEIIKLIKEKRKDISFR--NIGIITHYKAQKTMIQKDLEK 593
Query: 118 VLNSEEGKDLYINTVDAFQGQERDVIIMSCVRAS--NHGVGFVADIRRMNVALTRARRAL 175
+ + + ++TVDAFQG+++D II++CVRAS +GF+A ++R+NV +TRA+ +L
Sbjct: 594 EFDKKGPAE--VDTVDAFQGRQKDCIIVTCVRASAVQGSIGFLASLQRLNVTITRAKYSL 651
Query: 176 WVMGNAGALTQSDDWAALIADSKAR 200
+++G+ L ++ W LI D++ R
Sbjct: 652 FILGHLRTLMENQHWYELIQDAQKR 676
>gi|417414131|gb|JAA53366.1| Putative dna helicase, partial [Desmodus rotundus]
Length = 2488
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/205 (38%), Positives = 114/205 (55%), Gaps = 17/205 (8%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSE--SVINLPDEVYYKDPVLRPYVFFDVIHGR 58
+ L+VQYRMHP I FPS + Y L + I E ++ PY+ FDV G
Sbjct: 2067 LQLNVQYRMHPDICLFPSNYVYSRNLKTNRVTETIRCSSEWPFQ-----PYLVFDVGDGL 2121
Query: 59 ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV 118
E R + SY NV E K + L + L+ K + VGIIT YK Q +Q E
Sbjct: 2122 E--RRDNDSYVNVQEIKVVIELIKLLKDKRKDVTFR--NVGIITHYKAQKMMIQKELDKE 2177
Query: 119 LNSEEGKDLY-INTVDAFQGQERDVIIMSCVRAS--NHGVGFVADIRRMNVALTRARRAL 175
EGK L ++TVDAFQG+++D II++CVRA+ +GF+A ++R+ VA+TRA+ +L
Sbjct: 2178 F---EGKGLAEVDTVDAFQGRQKDCIIVTCVRANAVQGSIGFLASLQRLTVAITRAKYSL 2234
Query: 176 WVMGNAGALTQSDDWAALIADSKAR 200
+++G+ L + W LI D++ R
Sbjct: 2235 FILGHLRTLMDNQHWNHLIQDAQRR 2259
>gi|256810316|ref|YP_003127685.1| DNA helicase [Methanocaldococcus fervens AG86]
gi|256793516|gb|ACV24185.1| DNA helicase [Methanocaldococcus fervens AG86]
Length = 655
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/208 (35%), Positives = 113/208 (54%), Gaps = 25/208 (12%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLP-------DEVYYKDPVLR---PYVF 51
+L +QYRM+ I +FP+R FY +L ESV N+ +E+ D + P F
Sbjct: 449 ILEIQYRMNEKIMEFPNRMFYDNKLKADESVKNITLLDLVKEEEIDESDRDIVNEIPVQF 508
Query: 52 FDVIHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCL 111
F V G E S SY N++EA E + + +K + K+ +ITPY Q++ L
Sbjct: 509 FHV-EGVERKDKESPSYYNIEEA-------EKVLEVVKKLIKYKIPTNVITPYDAQVRYL 560
Query: 112 QHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRA 171
+ F E+ D+ +NTVD FQG+E + I++S VR N G F+ D+RR+NVA+TRA
Sbjct: 561 RRLF-----EEQNIDVEVNTVDGFQGRENEAIVISFVRTKNFG--FLKDLRRLNVAITRA 613
Query: 172 RRALWVMGNAGALTQSDDWAALIADSKA 199
+R L ++GN L Q + +I +K+
Sbjct: 614 KRKLILIGNENLLKQDKVYNEMIKWAKS 641
>gi|253741410|gb|EES98280.1| Regulator of nonsense transcripts 1-like protein [Giardia
intestinalis ATCC 50581]
Length = 1309
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/198 (37%), Positives = 109/198 (55%), Gaps = 14/198 (7%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN---LPDEVYYKD---PVLRPYVFFDVIH 56
L+VQYRMHP + FPS FY G L + + ++ +P + + PV FF +
Sbjct: 1089 LTVQYRMHPALSAFPSNTFYNGMLQNGVTQMDRQLIPKAMSTESFPWPVPSIPSFFWHVQ 1148
Query: 57 GRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFR 116
G G S +N E + +HL LK L + +GI+TPY Q ++ + +
Sbjct: 1149 GTH-EVGHGTSLRNDTEILCVEAIVDHL---LKCYELKQGDIGIVTPYDYQKCQIEMQLK 1204
Query: 117 NVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALW 176
+ SE +++N+VDAFQG E++VII S VR+ + +GF+ D RR+NV LTR R AL
Sbjct: 1205 DAGYSE----VFVNSVDAFQGHEKEVIIFSTVRSVDKHIGFLKDQRRLNVGLTRCRCALI 1260
Query: 177 VMGNAGALTQSDDWAALI 194
++GNA AL D W ALI
Sbjct: 1261 IVGNATALAIDDTWRALI 1278
>gi|211828990|gb|AAH79604.2| Setx protein [Mus musculus]
Length = 837
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 117/205 (57%), Gaps = 21/205 (10%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQ-----GRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHG 57
L++QYRMHP I FPS + Y RLT+S I E ++ PY+ FDV G
Sbjct: 421 LTIQYRMHPDICLFPSNYVYNKNLKTNRLTES---IRCSSEWPFQ-----PYLVFDV--G 470
Query: 58 RESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRN 117
S R + SY NV E K + + + +++ K + +GIIT YK Q +Q +
Sbjct: 471 DGSERRDNDSYINVQEIKLVMEIIKLIKEKRKDISFR--NIGIITHYKAQKTMIQKDLEK 528
Query: 118 VLNSEEGKDLYINTVDAFQGQERDVIIMSCVRAS--NHGVGFVADIRRMNVALTRARRAL 175
+ + + ++TVDAFQG+++D II++CVRAS +GF+A ++R+NV +TRA+ +L
Sbjct: 529 EFDKKGPAE--VDTVDAFQGRQKDCIIVTCVRASAVQGSIGFLASLQRLNVTITRAKYSL 586
Query: 176 WVMGNAGALTQSDDWAALIADSKAR 200
+++G+ L ++ W LI D++ R
Sbjct: 587 FILGHLRTLMENQHWYELIQDAQKR 611
>gi|211828438|gb|AAH58109.2| Setx protein [Mus musculus]
Length = 825
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 118/209 (56%), Gaps = 21/209 (10%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQ-----GRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHG 57
L++QYRMHP I FPS + Y RLT+S I E ++ PY+ FDV G
Sbjct: 409 LTIQYRMHPDICLFPSNYVYNKNLKTNRLTES---IRCSSEWPFQ-----PYLVFDV--G 458
Query: 58 RESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRN 117
S R + SY NV E K + + + +++ K + +GIIT YK Q +Q +
Sbjct: 459 DGSERRDNDSYINVQEIKLVMEIIKLIKEKRKDISFR--NIGIITHYKAQKTMIQKDLEK 516
Query: 118 VLNSEEGKDLYINTVDAFQGQERDVIIMSCVRAS--NHGVGFVADIRRMNVALTRARRAL 175
+ + + ++TVDAFQG+++D II++CVRAS +GF+A ++R+NV +TRA+ +L
Sbjct: 517 EFDKKGPAE--VDTVDAFQGRQKDCIIVTCVRASAVQGSIGFLASLQRLNVTITRAKYSL 574
Query: 176 WVMGNAGALTQSDDWAALIADSKARNCYM 204
+++G+ L ++ W LI D++ R +
Sbjct: 575 FILGHLRTLMENQHWYELIQDAQKRGAII 603
>gi|148676460|gb|EDL08407.1| amyotrophic lateral sclerosis 4 homolog (human) [Mus musculus]
Length = 846
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 117/205 (57%), Gaps = 21/205 (10%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQ-----GRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHG 57
L++QYRMHP I FPS + Y RLT+S I E ++ PY+ FDV G
Sbjct: 430 LTIQYRMHPDICLFPSNYVYNKNLKTNRLTES---IRCSSEWPFQ-----PYLVFDV--G 479
Query: 58 RESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRN 117
S R + SY NV E K + + + +++ K + +GIIT YK Q +Q +
Sbjct: 480 DGSERRDNDSYINVQEIKLVMEIIKLIKEKRKDISFR--NIGIITHYKAQKTMIQKDLEK 537
Query: 118 VLNSEEGKDLYINTVDAFQGQERDVIIMSCVRAS--NHGVGFVADIRRMNVALTRARRAL 175
+ + + ++TVDAFQG+++D II++CVRAS +GF+A ++R+NV +TRA+ +L
Sbjct: 538 EFDKKGPAE--VDTVDAFQGRQKDCIIVTCVRASAVQGSIGFLASLQRLNVTITRAKYSL 595
Query: 176 WVMGNAGALTQSDDWAALIADSKAR 200
+++G+ L ++ W LI D++ R
Sbjct: 596 FILGHLRTLMENQHWYELIQDAQKR 620
>gi|417407073|gb|JAA50163.1| Putative dna helicase [Desmodus rotundus]
Length = 2735
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/205 (38%), Positives = 114/205 (55%), Gaps = 17/205 (8%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSE--SVINLPDEVYYKDPVLRPYVFFDVIHGR 58
+ L+VQYRMHP I FPS + Y L + I E ++ PY+ FDV G
Sbjct: 2314 LQLNVQYRMHPDICLFPSNYVYSRNLKTNRVTETIRCSSEWPFQ-----PYLVFDVGDGL 2368
Query: 59 ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV 118
E R + SY NV E K + L + L+ K + VGIIT YK Q +Q E
Sbjct: 2369 E--RRDNDSYVNVQEIKVVIELIKLLKDKRKDVTFR--NVGIITHYKAQKMMIQKELDKE 2424
Query: 119 LNSEEGKDLY-INTVDAFQGQERDVIIMSCVRAS--NHGVGFVADIRRMNVALTRARRAL 175
EGK L ++TVDAFQG+++D II++CVRA+ +GF+A ++R+ VA+TRA+ +L
Sbjct: 2425 F---EGKGLAEVDTVDAFQGRQKDCIIVTCVRANAVQGSIGFLASLQRLTVAITRAKYSL 2481
Query: 176 WVMGNAGALTQSDDWAALIADSKAR 200
+++G+ L + W LI D++ R
Sbjct: 2482 FILGHLRTLMDNQHWNHLIQDAQRR 2506
>gi|432328902|ref|YP_007247046.1| DNA helicase, putative [Aciduliprofundum sp. MAR08-339]
gi|432135611|gb|AGB04880.1| DNA helicase, putative [Aciduliprofundum sp. MAR08-339]
Length = 650
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 118/217 (54%), Gaps = 22/217 (10%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINL--------PDEVYYKDPVLRP--YV 50
+ L +QYRM+ I +FPS FY+G L +V + P + + P +
Sbjct: 441 ITLRIQYRMNEKIMEFPSNMFYRGLLEAHRTVKDRTIADVGIDPSRISEMRDICNPEEVI 500
Query: 51 FFDVIHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKC 110
F + E R GS SYQN EA+ C+ + LK +GL + +GIITPY Q+
Sbjct: 501 IFVDLETEEEQRRGSTSYQNPGEAR---CVTRIVNCLLK-IGLKEKHIGIITPYDDQVDL 556
Query: 111 LQHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALT 169
L+ N +DL I +VD FQG+E++VI++S VRA++ G +GF+ D+RR+NVA+T
Sbjct: 557 LKSIIPN-------EDLEIKSVDGFQGREKEVIVISFVRANDRGELGFLTDLRRLNVAIT 609
Query: 170 RARRALWVMGNAGALTQSDDWAALIADSKARNCYMDM 206
RA+R L ++GN+ L + +LI + R + M
Sbjct: 610 RAKRKLIIVGNSKTLRAHPVYDSLIDYIEHRGKVLKM 646
>gi|399218391|emb|CCF75278.1| unnamed protein product [Babesia microti strain RI]
Length = 1229
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/221 (36%), Positives = 116/221 (52%), Gaps = 15/221 (6%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYV-FFDV---IHG 57
LL+VQ RMHP I FP++HFY+ RLTD E+V +K P V F DV G
Sbjct: 1000 LLNVQRRMHPSISQFPNQHFYEHRLTDGENVFAYTPLKGFKWPCENFNVCFVDVSIGCAG 1059
Query: 58 RESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVT---VGIITPYKLQLKCLQHE 114
R S N+ E V L + G++T +GI+TPY Q L+ +
Sbjct: 1060 SNYERPQGQSKYNIIETNVVVALLSSF------ISAGEITSRQIGILTPYDSQKYHLKTK 1113
Query: 115 FRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARR 173
+ S+ L I++VD FQG+E+D+II S VR+++ G VGF+ D RRMNV LTRARR
Sbjct: 1114 INSTFPSDVCNGLEIDSVDGFQGKEKDLIIFSAVRSNSDGTVGFLKDSRRMNVMLTRARR 1173
Query: 174 ALWVMGNAGAL-TQSDDWAALIADSKARNCYMDMDSLPKEF 213
+ V+G+ L ++ +W A + RN + + L +
Sbjct: 1174 GIVVVGDRFTLMNETTNWKAWLQFLSDRNSIIRISDLKEHL 1214
>gi|406607433|emb|CCH41224.1| ATP-dependent helicase NAM7 [Wickerhamomyces ciferrii]
Length = 1038
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/216 (36%), Positives = 122/216 (56%), Gaps = 16/216 (7%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTD--SESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
L VQYRM+P + +F S FY G L + ++ LP+ + V P +F+ GRE
Sbjct: 675 LEVQYRMNPCLSEFSSNMFYDGSLQNGVTKEQRQLPNSAFPWPVVDTPMMFW-ANFGREE 733
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
G S+ N EA C E + L G+ +G+ITPY+ Q + + +N
Sbjct: 734 ISGSGTSFLNRIEAMN--C--ERIITRLFRDGVQPEQIGVITPYEGQRAYVVQYMQ--MN 787
Query: 121 SEEGKDLYIN----TVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRAL 175
KDLY++ +VDAFQG+E+D II+SCVRA++ +GF++D RR+NVALTRA+ +
Sbjct: 788 GSMDKDLYMDVEVASVDAFQGREKDFIILSCVRANDQQNIGFLSDPRRLNVALTRAKYGV 847
Query: 176 WVMGNAGALTQSDDWAALIADSKARNCYMD--MDSL 209
++GN AL+++ W L+ + + C ++ +DSL
Sbjct: 848 VILGNPRALSKNQLWNQLLLHYREKGCLVEGLLDSL 883
>gi|440789574|gb|ELR10880.1| putative DNA helicase [Acanthamoeba castellanii str. Neff]
Length = 1656
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 107/194 (55%), Gaps = 8/194 (4%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
+L +QYRMHP I +FPS HFY G++ D P P + F + G E
Sbjct: 567 MLEIQYRMHPIISEFPSVHFYGGKIKDGIVAAQRPSPTGIAWPSEGNPIAFVNVDGYEKQ 626
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVT-VGIITPYKLQLKCLQHEF--RNV 118
S+ N E G +++ + + +G V +G+ITPY Q+K L F R
Sbjct: 627 STDGYSWFNSAE---GEAVFQLVSAFDQRSDVGDVKDIGVITPYNGQVKHLADLFSRRGG 683
Query: 119 LN-SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALW 176
+N +E+ L IN+VD +QG+E++VII + VR+++ G VGF+ D RR+NVALTRARR L
Sbjct: 684 MNKNEKWHKLNINSVDGYQGREKEVIIFTAVRSNSRGDVGFLRDWRRLNVALTRARRGLL 743
Query: 177 VMGNAGALTQSDDW 190
V+GN L + W
Sbjct: 744 VVGNRRTLQSDEHW 757
>gi|302829609|ref|XP_002946371.1| hypothetical protein VOLCADRAFT_86581 [Volvox carteri f.
nagariensis]
gi|300268117|gb|EFJ52298.1| hypothetical protein VOLCADRAFT_86581 [Volvox carteri f.
nagariensis]
Length = 1135
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/213 (34%), Positives = 117/213 (54%), Gaps = 20/213 (9%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESV-------INLPDEVYYKDPVLRPYVFFDVI 55
L VQYRMHP + +FPS FY+G L + + ++ P + +P +P +F+ V
Sbjct: 776 LQVQYRMHPCLSEFPSNTFYEGTLQNGTGMGERRLVGVDFP----WHNPD-KPMMFW-VQ 829
Query: 56 HGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQ-LKCLQHE 114
G E SY N EA E + G+ +G+ITPY+ Q +
Sbjct: 830 LGAEEISASGTSYLNRTEA----AAVEKVVTRFLQNGMSPSQIGVITPYEGQRAHVVSVM 885
Query: 115 FRN-VLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRAR 172
RN + + K++ +++VDAFQG+E+D+I++SCVR++ H +GF++D RR+NVALTRAR
Sbjct: 886 VRNGAVRQDLYKEIEVSSVDAFQGREKDIIVLSCVRSNEHSSIGFLSDPRRLNVALTRAR 945
Query: 173 RALWVMGNAGALTQSDDWAALIADSKARNCYMD 205
L V+GN L++ W +L+ K C ++
Sbjct: 946 YGLVVLGNPRVLSRQPLWNSLLQYFKESGCLVE 978
>gi|440794946|gb|ELR16091.1| hypothetical protein ACA1_224920 [Acanthamoeba castellanii str.
Neff]
Length = 1615
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 107/194 (55%), Gaps = 8/194 (4%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
+L +QYRMHP I +FPS HFY G++ D P P + F + G E
Sbjct: 566 MLEIQYRMHPIISEFPSVHFYGGKIKDGIVAAQRPSPTGIAWPSEGNPIAFVNVDGYEKQ 625
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVT-VGIITPYKLQLKCLQHEF--RNV 118
S+ N E G +++ + + +G V +G+ITPY Q+K L F R
Sbjct: 626 STDGYSWFNSAE---GEAVFQLVSAFDQRSDVGDVKDIGVITPYNGQVKHLADLFSRRGG 682
Query: 119 LN-SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALW 176
+N +E+ L IN+VD +QG+E++VII + VR+++ G VGF+ D RR+NVALTRARR L
Sbjct: 683 MNKNEKWHKLNINSVDGYQGREKEVIIFTAVRSNSRGDVGFLRDWRRLNVALTRARRGLL 742
Query: 177 VMGNAGALTQSDDW 190
V+GN L + W
Sbjct: 743 VVGNRRTLQSDEHW 756
>gi|320580629|gb|EFW94851.1| ATP-dependent helicase NAM7 [Ogataea parapolymorpha DL-1]
Length = 909
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/266 (33%), Positives = 138/266 (51%), Gaps = 20/266 (7%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINL--PDEVYYKDPVLRPYVFFDVIHGRES 60
L VQYRMHP + +F S FY G L + + + PD + P+ + F + GRE
Sbjct: 593 LEVQYRMHPCLSEFSSNVFYDGSLQNGVTAESRSRPDSTF-PWPIREIPMMFWAVFGREE 651
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLK-CLQHEFRNVL 119
SY N EA C E + L G+ +G+ITPY Q +Q+ N L
Sbjct: 652 LSASGTSYLNRTEAMN--C--EKIITRLLKEGVDPGKIGVITPYAGQATFIVQYMEMNGL 707
Query: 120 NSEEGK--DLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRALW 176
+++ + ++ + +VD+FQG+E+D II+SCVRA+ N +GF++D RR+NVALTRAR +
Sbjct: 708 IADKSRYSEVEVASVDSFQGREKDYIILSCVRANDNQLIGFLSDPRRLNVALTRARFGMA 767
Query: 177 VMGNAGALTQSDDWAALIADSKARNCYMD--MDSLPKEFSVALAAKAPGYGPLQGKIPHN 234
++GN L+++ W L+ + + C +D +++L K ++ L+ G P
Sbjct: 768 ILGNPKTLSKNPMWNRLLMHFREKGCLVDGSLENL-KLCNIPLSRGGQATNGEFGLAPST 826
Query: 235 ARGLRSAGQRHRSFDMNMESRSGTPS 260
A G R +S+D N GT S
Sbjct: 827 ATG------RSQSYDTNSLFSYGTGS 846
>gi|340053654|emb|CCC47947.1| putative nonsense mRNA reducing factor 1 [Trypanosoma vivax Y486]
Length = 861
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/209 (36%), Positives = 111/209 (53%), Gaps = 24/209 (11%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLT--------DSESVINLPDEVYYKDPVLRPYVFFDV 54
L VQYRMHP + F S HFY+G L D+ V PD RP+ F++
Sbjct: 626 LDVQYRMHPCLSLFISHHFYEGTLQNGVTEGQRDALQVFPWPDGT-------RPFFFYNS 678
Query: 55 IHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHE 114
E GS SY N EA + + K ++ G+ +G+ITPY+ Q + L++
Sbjct: 679 TGPEELGANGS-SYLNRTEAALA---EQVVTKLIRDGGVSPDGIGVITPYRSQCRFLRNY 734
Query: 115 FRNV--LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH--GVGFVADIRRMNVALTR 170
L + + +++VDAFQG+E++ II SCVR SNH G+GF D RR+NV+LTR
Sbjct: 735 LSRCGFLPASTYDRVEVSSVDAFQGREKEFIIFSCVR-SNHRQGIGFAVDGRRLNVSLTR 793
Query: 171 ARRALWVMGNAGALTQSDDWAALIADSKA 199
A+R L +MGN ++ +W L+ K+
Sbjct: 794 AKRGLIIMGNVQLFSRYPNWNELLVHMKS 822
>gi|195588629|ref|XP_002084060.1| GD13018 [Drosophila simulans]
gi|194196069|gb|EDX09645.1| GD13018 [Drosophila simulans]
Length = 1408
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 112/205 (54%), Gaps = 18/205 (8%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESHR 62
LS+QYRMHP I +P+++FY+ +L ++ES + P + PY ++ + R+S+
Sbjct: 1199 LSMQYRMHPEICRWPNKYFYEDQLINAEST------ARFASPFI-PYCVINLKYTRDSNG 1251
Query: 63 GGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNSE 122
+ S N +EA F L + K + S + + GII+PY+ Q L + +N
Sbjct: 1252 AQNKSISNNEEAAFVAKLLTEMDKHMPS---KRFSYGIISPYQNQCYALSQVIPSHMN-- 1306
Query: 123 EGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGNAG 182
+ TVD++QG E+DVII+S R G GF+ + +R+NVALTR RR L + GN
Sbjct: 1307 ----ITPQTVDSYQGLEKDVIIISNART--RGCGFLTNYQRLNVALTRPRRCLVICGNFE 1360
Query: 183 ALTQSDDWAALIADSKARNCYMDMD 207
L + W L+ D++ R Y ++D
Sbjct: 1361 DLKSVEMWRNLLDDARKRKVYFNLD 1385
>gi|167516556|ref|XP_001742619.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163779243|gb|EDQ92857.1| predicted protein [Monosiga brevicollis MX1]
Length = 856
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/210 (35%), Positives = 113/210 (53%), Gaps = 14/210 (6%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRL----TDSESVINLPDEVYYKDPVLRPYVFFDVIHGR 58
L VQYRMHP + +FPS FY+G L T SE ++ D + PV + F G+
Sbjct: 597 LQVQYRMHPCLSEFPSNTFYEGSLQNGVTASERLMPAVD---FPWPVPETPMMFYASMGQ 653
Query: 59 ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFR 116
E SY N EA + + + + LKS G+ +GI+TPY+ Q + F
Sbjct: 654 EEISASGTSYLNRTEAAN---VEKMVTRFLKS-GVTPEQIGIVTPYEGQRAYIVQYMSFN 709
Query: 117 NVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRAL 175
L + + + +VDAFQG+E+D II+SC R++ H G+GF+ D RR+NVALTRA+ +
Sbjct: 710 GTLRQPLYEAVEVASVDAFQGREKDYIILSCTRSNEHQGIGFLNDPRRLNVALTRAKYGI 769
Query: 176 WVMGNAGALTQSDDWAALIADSKARNCYMD 205
++GN L++ W L+ K C ++
Sbjct: 770 IIVGNPKVLSKQALWNNLLVHYKENGCLVE 799
>gi|397651076|ref|YP_006491657.1| dna2-nam7 helicase family protein [Pyrococcus furiosus COM1]
gi|393188667|gb|AFN03365.1| dna2-nam7 helicase family protein [Pyrococcus furiosus COM1]
Length = 655
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/219 (35%), Positives = 126/219 (57%), Gaps = 29/219 (13%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESV--INLPD-------EVYYKDPVLRP---Y 49
+L++QYRM+ I +FPSR FY GR+ ESV I L D ++D +L P
Sbjct: 443 MLTIQYRMNERIMEFPSREFYDGRIVADESVKNITLADLGIKVNASGIWRD-ILDPNNVL 501
Query: 50 VFFD--VIHGR-ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKL 106
VF D ++ R E R GS S +N EAK + E L ++ G+ +G+ITPY
Sbjct: 502 VFIDTCMLENRFERQRRGSESRENPLEAKIVSKIVEKLLES----GVKAEMMGVITPYDD 557
Query: 107 QLKCLQHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMN 165
Q R++++ +++ + TVD +QG+E++VII+S VR++ G +GF+ D+RR+N
Sbjct: 558 Q--------RDLISLNVPEEVEVKTVDGYQGREKEVIILSFVRSNKAGEIGFLKDLRRLN 609
Query: 166 VALTRARRALWVMGNAGALTQSDDWAALIADSKARNCYM 204
V+LTRA+R L ++G++ L+ + + LI + + Y+
Sbjct: 610 VSLTRAKRKLIMIGDSSTLSSHETYRRLIEHVREKGLYV 648
>gi|18976944|ref|NP_578301.1| dna2-nam7 helicase family protein [Pyrococcus furiosus DSM 3638]
gi|18892566|gb|AAL80696.1| dna2-nam7 helicase family protein [Pyrococcus furiosus DSM 3638]
Length = 655
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/219 (35%), Positives = 126/219 (57%), Gaps = 29/219 (13%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESV--INLPD-------EVYYKDPVLRP---Y 49
+L++QYRM+ I +FPSR FY GR+ ESV I L D ++D +L P
Sbjct: 443 MLTIQYRMNERIMEFPSREFYDGRIVADESVKNITLADLGIKVNASGIWRD-ILDPNNVL 501
Query: 50 VFFD--VIHGR-ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKL 106
VF D ++ R E R GS S +N EAK + E L ++ G+ +G+ITPY
Sbjct: 502 VFIDTCMLENRFERQRRGSESRENPLEAKIVSKIVEKLLES----GVKAEMMGVITPYDD 557
Query: 107 QLKCLQHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMN 165
Q R++++ +++ + TVD +QG+E++VII+S VR++ G +GF+ D+RR+N
Sbjct: 558 Q--------RDLISLNVPEEVEVKTVDGYQGREKEVIILSFVRSNKAGEIGFLKDLRRLN 609
Query: 166 VALTRARRALWVMGNAGALTQSDDWAALIADSKARNCYM 204
V+LTRA+R L ++G++ L+ + + LI + + Y+
Sbjct: 610 VSLTRAKRKLIMIGDSSTLSSHETYRRLIEHVREKGLYV 648
>gi|403337792|gb|EJY68119.1| hypothetical protein OXYTRI_11366 [Oxytricha trifallax]
Length = 1153
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/208 (36%), Positives = 114/208 (54%), Gaps = 10/208 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN--LPDEVYYKDPVLRPYVFFDVIHGRES 60
L VQYRMHP + FPS FY+G L + S + L D + +P +F+ I E
Sbjct: 790 LQVQYRMHPVLSAFPSMTFYEGSLQNGISKQDRILSDFKFQWPASEKPMMFYHSISNEEI 849
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV-- 118
G+ S+ N EA + V E L L +GIITPY+ Q + +
Sbjct: 850 SASGT-SFLNRQEA-YNV---EALVTQFLKFDLKPEQIGIITPYEGQKAFITSYMQRSGQ 904
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASN-HGVGFVADIRRMNVALTRARRALWV 177
L+ K++ + +VD+FQG+E+D I++SCVR++ G+GF+ D RR+NVALTRA+ L +
Sbjct: 905 LDPSLYKEIEVASVDSFQGREKDFILLSCVRSNEASGIGFLNDPRRLNVALTRAKYGLVI 964
Query: 178 MGNAGALTQSDDWAALIADSKARNCYMD 205
GNA L++ D W L+ + K + C ++
Sbjct: 965 FGNAKVLSKHDLWNNLLNEFKNQGCLVE 992
>gi|403178280|ref|XP_003336719.2| hypothetical protein PGTG_17974 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375164088|gb|EFP92300.2| hypothetical protein PGTG_17974 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1131
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 111/207 (53%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + +FPS FY+G L + + + V + P + F G+E
Sbjct: 707 LQVQYRMHPCLSEFPSNMFYEGSLQNGVTAPERIKKNVDFPWPQPTTPMCFHCNLGQEEI 766
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCL--QHEFRNVL 119
S+ N EA E + G+ +GI+TPY+ Q + + L
Sbjct: 767 SSSGTSFLNRTEASN----VEKVVTRFFKAGVLPSQIGIVTPYEGQRSYIVTYMQTNGTL 822
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+ KD+ + +VDAFQG+E+D II+SCVR+++H G+GF+ D RR+NVALTRA+ + V+
Sbjct: 823 KKDLYKDIEVASVDAFQGREKDYIILSCVRSNDHQGIGFLNDPRRLNVALTRAKYGVVVL 882
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN L++ W L+ K ++C ++
Sbjct: 883 GNPKVLSKHALWHFLLTAYKEKSCLVE 909
>gi|70949042|ref|XP_743968.1| regulator of nonsense transcripts [Plasmodium chabaudi chabaudi]
gi|56523717|emb|CAH78222.1| regulator of nonsense transcripts, putative [Plasmodium chabaudi
chabaudi]
Length = 670
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 107/189 (56%), Gaps = 12/189 (6%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY----YKDPVLRPYVFFDVIHGR 58
L VQYRMHP + +FPS FY G L + I L + Y + P + +FF +G
Sbjct: 330 LEVQYRMHPCLSEFPSYVFYDGCLQNG---ITLKEREYPLKNFPWPNSKYPMFFYNSNGL 386
Query: 59 ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV 118
E SY N EA+ E L + L + GL +G+ITPY+ Q + F+
Sbjct: 387 EEMSASGTSYLNRSEAQN----MEILVRALLNSGLKATQIGVITPYEGQRAYITSLFQKN 442
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWV 177
++ + D+ + +VDAFQG+E+D I++SCVR++ G+GF+ D RR+NVALTRA+ L +
Sbjct: 443 ISYQHCLDIEVASVDAFQGREKDFILLSCVRSNKKLGIGFLNDPRRLNVALTRAKYGLII 502
Query: 178 MGNAGALTQ 186
GNA L++
Sbjct: 503 CGNAKVLSR 511
>gi|123508693|ref|XP_001329696.1| regulator of nonsense transcripts 1 [Trichomonas vaginalis G3]
gi|121912743|gb|EAY17561.1| regulator of nonsense transcripts 1, putative [Trichomonas
vaginalis G3]
Length = 882
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/204 (36%), Positives = 106/204 (51%), Gaps = 23/204 (11%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRL---------TDSESVINLPDEVYYKDPVLRPYVFFD 53
L QYRMHP + +FPS FY G L T + V N P + P +F++
Sbjct: 619 LLTQYRMHPVLSEFPSNTFYDGELMNGIPAEKRTPQQPVFNWPKPSF-------PLMFYN 671
Query: 54 VIHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH 113
++ E SY N EA + + L G+ +GII+PY Q LQ+
Sbjct: 672 NVNNEEEISNSGTSYINAFEAT----IVSQIVTQLCKAGVDPQQIGIISPYSGQKFYLQN 727
Query: 114 EFRNV--LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTR 170
++ L S + L I +VD+FQG E+D IIMSCVR + HG +GF+ D RR+NVALTR
Sbjct: 728 FLASMATLPSSFYQRLAIASVDSFQGGEKDYIIMSCVRCNPHGSIGFLKDYRRLNVALTR 787
Query: 171 ARRALWVMGNAGALTQSDDWAALI 194
A+ L ++G A L++S W L+
Sbjct: 788 AKYGLIIVGCARVLSKSILWYNLL 811
>gi|319957167|ref|YP_004168430.1| DNA helicase [Nitratifractor salsuginis DSM 16511]
gi|319419571|gb|ADV46681.1| DNA helicase [Nitratifractor salsuginis DSM 16511]
Length = 733
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/203 (39%), Positives = 111/203 (54%), Gaps = 24/203 (11%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVI--NLPDEVYYKDPVLRP---YVFFDV-- 54
+L VQYRMH I DFP+R Y G L SV LP E +DP L P VF D
Sbjct: 517 MLRVQYRMHETIMDFPNRLMYDGALVADPSVARRTLPVEKPPEDPCLDPSFPVVFADTSE 576
Query: 55 IHGRESHRGGSVSYQNVDEAKFGVCLYEHLQK---TLKSMGLGKVTVGIITPYKLQLKCL 111
+ E S SY+N EA HL + L + G+ +GIITPY Q+K L
Sbjct: 577 MEASEHLPERSTSYENPTEAG-------HLLRWVTELVACGIAPAQIGIITPYLAQVKLL 629
Query: 112 QHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTR 170
R +L EE D+ + +VD FQG+E++VI++S VR++ VGFV+D RR+NVA+TR
Sbjct: 630 ----RRLL--EEFPDVEVKSVDGFQGREKEVILISFVRSNLAQSVGFVSDPRRLNVAMTR 683
Query: 171 ARRALWVMGNAGALTQSDDWAAL 193
AR L ++G+ L ++ + L
Sbjct: 684 ARSKLLMIGDRSTLEPNEPFGKL 706
>gi|296191064|ref|XP_002743464.1| PREDICTED: probable helicase senataxin [Callithrix jacchus]
Length = 2678
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 112/200 (56%), Gaps = 11/200 (5%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESHR 62
L++QYRMHP I FPS + Y L + + D +PY+ FDV G S R
Sbjct: 2255 LTIQYRMHPDICLFPSNYIYNRNLKTNRQTETV---RCSSDWPFQPYLVFDV--GDGSER 2309
Query: 63 GGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNSE 122
+ SY NV E K + L + ++ K + +GIIT YK Q +Q + + +
Sbjct: 2310 RDNDSYVNVQEIKLVIELIKLIKDKRKDVSFR--NIGIITHYKAQKTMIQKDLDKEFDRK 2367
Query: 123 EGKDLYINTVDAFQGQERDVIIMSCVRASNH--GVGFVADIRRMNVALTRARRALWVMGN 180
+ ++TVDAFQG+++D +I++CVRA+ +GF+A ++R+NV +TRA+ +L+++G+
Sbjct: 2368 GPAE--VDTVDAFQGRQKDCVIVTCVRANTMQGSIGFLASLQRLNVTITRAKYSLFILGH 2425
Query: 181 AGALTQSDDWAALIADSKAR 200
L ++ W LI D++ R
Sbjct: 2426 LRTLMENQHWNQLIQDAQKR 2445
>gi|242011006|ref|XP_002426248.1| regulator of nonsense transcripts, putative [Pediculus humanus
corporis]
gi|212510311|gb|EEB13510.1| regulator of nonsense transcripts, putative [Pediculus humanus
corporis]
Length = 1108
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 109/196 (55%), Gaps = 8/196 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSE-SVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + FPS FY+G L + S +V + P + F V G+E
Sbjct: 691 LEVQYRMHPELSRFPSDFFYEGSLQNGVCSEERKLAKVDFPWPANDKPMLFYVTTGQEEI 750
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
G SY N EA E + G+ +G+ITPY+ Q L +++ L
Sbjct: 751 AGSGTSYLNRTEASN----VEKIVTKFLRAGIKPEQIGLITPYEGQRAYLVQFMQYQGSL 806
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASN-HGVGFVADIRRMNVALTRARRALWVM 178
+S+ +++ + +VDAFQG+E+D+IIMSCVR++ G+GF+ D RR+NVALTRA+ + ++
Sbjct: 807 HSKLYQEIEVASVDAFQGREKDIIIMSCVRSNELLGIGFLNDPRRLNVALTRAKYGIIII 866
Query: 179 GNAGALTQSDDWAALI 194
GN L++ W L+
Sbjct: 867 GNPKVLSKQPLWNHLL 882
>gi|15668275|ref|NP_247068.1| DNA-binding protein [Methanocaldococcus jannaschii DSM 2661]
gi|2498043|sp|Q57568.1|Y104_METJA RecName: Full=Uncharacterized ATP-dependent helicase MJ0104
gi|1590880|gb|AAB98084.1| DNA-binding protein, probably DNA helicase [Methanocaldococcus
jannaschii DSM 2661]
Length = 663
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/208 (35%), Positives = 112/208 (53%), Gaps = 25/208 (12%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLP----------DEVYYKDPVLRPYVF 51
+L +QYRM+ I +FP++ FY +L ESV N+ DEV +D + V
Sbjct: 459 ILEIQYRMNEKIMEFPNKMFYNNKLKADESVKNITLLDLVKEEEIDEVD-RDIINEIPVQ 517
Query: 52 FDVIHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCL 111
F + G E S SY N++EA E + + +K + K+ +ITPY Q++ L
Sbjct: 518 FINVEGIERKDKESPSYYNIEEA-------EKVLEIVKKLVKYKIPTNVITPYDAQVRYL 570
Query: 112 QHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRA 171
+ F E D+ +NTVD FQG+E + I++S VR N G F+ D+RR+NVA+TRA
Sbjct: 571 RRLF-----EEHNIDIEVNTVDGFQGRENEAIVISFVRTKNFG--FLKDLRRLNVAITRA 623
Query: 172 RRALWVMGNAGALTQSDDWAALIADSKA 199
+R L ++GN L Q + +I +K+
Sbjct: 624 KRKLILIGNENLLKQDKVYNEMIKWAKS 651
>gi|403289669|ref|XP_003935968.1| PREDICTED: probable helicase senataxin [Saimiri boliviensis
boliviensis]
Length = 2677
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 113/202 (55%), Gaps = 11/202 (5%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
+ L++QYRMHP I FPS + Y L + + D +PY+ FDV G S
Sbjct: 2253 LRLTIQYRMHPDICLFPSNYVYNRNLKTNRQTETI---RCSSDWPFQPYLVFDV--GDGS 2307
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
R + SY NV E K + L + ++ K + +GIIT YK Q +Q + +
Sbjct: 2308 ERRDNDSYVNVQEIKLVIELIKLIKDKRKDVTFR--NIGIITHYKAQKTMIQKDLDKEFD 2365
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNH--GVGFVADIRRMNVALTRARRALWVM 178
+ + ++TVDAFQG+++D +I++CVRA+ +GF+A ++R+NV +TRA+ +L+++
Sbjct: 2366 RKGPAE--VDTVDAFQGRQKDCVIVTCVRANTMQGSIGFLASLQRLNVTITRAKYSLFIL 2423
Query: 179 GNAGALTQSDDWAALIADSKAR 200
G+ L ++ W LI D++ R
Sbjct: 2424 GHLRTLMENQHWNQLIQDAQKR 2445
>gi|333910064|ref|YP_004483797.1| DNA helicase [Methanotorris igneus Kol 5]
gi|333750653|gb|AEF95732.1| DNA helicase [Methanotorris igneus Kol 5]
Length = 654
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 114/207 (55%), Gaps = 29/207 (14%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRL-----TDSESVINLPD--EVYYKDPVL---RPYVF 51
+L +QYRM+ I +FP++ FY +L S+++++L E+ +D + P VF
Sbjct: 446 ILKIQYRMNEKIMEFPNKAFYDNKLKAHDSVKSQTILDLIKGVEIDEEDKYIINEEPVVF 505
Query: 52 FDVIHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCL 111
DV G+E S SY N +EAK L E +K + V +ITPY Q+K +
Sbjct: 506 IDV-KGKEKRDKDSTSYYNEEEAKVVAKLVETFKKY-------NIPVSVITPYDAQVKLI 557
Query: 112 QHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRA 171
S +D+ ++TVD FQG+E +VII+S VR G F+ D+RR+NVA+TRA
Sbjct: 558 ---------SNLCEDIEVSTVDGFQGKENEVIIISFVRTEKFG--FLEDLRRLNVAITRA 606
Query: 172 RRALWVMGNAGALTQSDDWAALIADSK 198
+R L ++G L+Q++ + L+ +K
Sbjct: 607 KRKLVIVGCKELLSQNETYKELVKSAK 633
>gi|401402591|ref|XP_003881287.1| putative regulator of nonsense transcripts UPF1 [Neospora caninum
Liverpool]
gi|325115699|emb|CBZ51254.1| putative regulator of nonsense transcripts UPF1 [Neospora caninum
Liverpool]
Length = 1428
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/191 (38%), Positives = 99/191 (51%), Gaps = 13/191 (6%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINL------PDEVYYKDPVLRPYVFFDVIH 56
L VQYRMHP + FPS FY+G L + ++ P E + P +FF
Sbjct: 860 LKVQYRMHPALSFFPSYFFYEGELQNGVTMTERTYFHRGPGEHRFPWPSEERPMFFYHST 919
Query: 57 GRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFR 116
E G SY N EA E + L GL +G+ITPY Q + F+
Sbjct: 920 ASEEISGSGTSYVNRVEASN----IEKIVTFLLKCGLKASQIGVITPYDGQRAHISSLFQ 975
Query: 117 --NVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRA-SNHGVGFVADIRRMNVALTRARR 173
L DL + +VDAFQG+E+D I++SCVR+ SN G+GF+AD RR+NVA+TRA+
Sbjct: 976 RQTTLGQAAFADLEVASVDAFQGREKDFILLSCVRSNSNTGIGFLADSRRLNVAMTRAKY 1035
Query: 174 ALWVMGNAGAL 184
L + GNA L
Sbjct: 1036 GLIICGNASVL 1046
>gi|72389186|ref|XP_844888.1| regulator of nonsense transcripts 1 [Trypanosoma brucei TREU927]
gi|62359996|gb|AAX80419.1| regulator of nonsense transcripts 1, putative [Trypanosoma brucei]
gi|70801422|gb|AAZ11329.1| regulator of nonsense transcripts 1, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 842
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/198 (38%), Positives = 107/198 (54%), Gaps = 11/198 (5%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINL-PDEVYYKDPVLRPYVFFDVIHGRESH 61
L VQYRM+P + FPS H+Y+G L + + EV+ V +P F++ E
Sbjct: 603 LDVQYRMNPSLSFFPSHHYYEGTLQNGVTAEQRDASEVFPWPDVTKPIFFYNATGNEELG 662
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV--L 119
G SY N EA L E + L G+ +G+ITPY+ Q + L+ L
Sbjct: 663 SNGR-SYLNRAEA----ALTEQIVTKLIQGGVEPGDIGVITPYRSQCRYLRSYLSRSGRL 717
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH--GVGFVADIRRMNVALTRARRALWV 177
E + I++VDAFQG+E++ II+SCVR SNH G GFV D RR+NV+LTRA+R L +
Sbjct: 718 PMEVYDRVEISSVDAFQGREKEFIILSCVR-SNHRQGAGFVTDGRRLNVSLTRAKRGLII 776
Query: 178 MGNAGALTQSDDWAALIA 195
MGN ++ W L+
Sbjct: 777 MGNVQLFSRYPGWHELLV 794
>gi|367000487|ref|XP_003684979.1| hypothetical protein TPHA_0C03950 [Tetrapisispora phaffii CBS 4417]
gi|357523276|emb|CCE62545.1| hypothetical protein TPHA_0C03950 [Tetrapisispora phaffii CBS 4417]
Length = 990
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 118/215 (54%), Gaps = 14/215 (6%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLRPYVFFDVIHGRESH 61
L VQYRM+P++ +FPS FY+G L + ++ + P+ + F GRE
Sbjct: 648 LEVQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTVSASSFPWPIHEIPMMFWANFGREEI 707
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
SY N EA C E + L G+ +G+ITPY+ Q + + +N
Sbjct: 708 SANGTSYLNRIEAM--NC--ERIITKLFKDGVKPEQIGVITPYEGQRAYILQYMQ--MNG 761
Query: 122 EEGKDLYIN----TVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRALW 176
K+LYIN +VDAFQG+E+D II+SCVRA+ +GF++D RR+NV LTRA+ L
Sbjct: 762 SLDKELYINVEVASVDAFQGREKDYIILSCVRANEQQAIGFLSDPRRLNVGLTRAKYGLV 821
Query: 177 VMGNAGALTQSDDWAALIADSKARNCYMD--MDSL 209
++GN +L+++ W L+ + + C ++ +D+L
Sbjct: 822 ILGNPRSLSRNSLWNHLLIHFREKGCLVEGSLDNL 856
>gi|390444674|ref|ZP_10232447.1| ATPase AAA [Nitritalea halalkaliphila LW7]
gi|389664177|gb|EIM75683.1| ATPase AAA [Nitritalea halalkaliphila LW7]
Length = 601
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 120/222 (54%), Gaps = 20/222 (9%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVI-HGRE 59
++L VQYRM I F ++ FY+G+L + I ++ +P+L F D G
Sbjct: 382 VMLEVQYRMPEVIMRFSAQTFYKGKLQAAP--ITETHRLHPNEPILE---FIDTAGTGFL 436
Query: 60 SHR-GGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKV-----TVGIITPYKLQLKCLQH 113
H+ S+S N EA V L +L++ ++ +G+G + +G+I PY Q++ L+H
Sbjct: 437 EHKEKDSLSTLNEREA---VALLRYLEQCIRRLGIGHMKQEGWNIGLIAPYSAQVRALRH 493
Query: 114 EFRNVLNSEEGKD----LYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVAL 168
K L +N++D FQGQERD++ +S VRA+ G +GF++DIRRMNVAL
Sbjct: 494 HIFETFQFPNLKAFSELLTVNSIDGFQGQERDIMAISLVRANETGEIGFLSDIRRMNVAL 553
Query: 169 TRARRALWVMGNAGALTQSDDWAALIADSKARNCYMDMDSLP 210
TRA+R L VMG++ L+ +A I Y + +LP
Sbjct: 554 TRAKRKLIVMGDSATLSHHPFYADFIDYVDRHGSYSSIYTLP 595
>gi|261328192|emb|CBH11169.1| nonsense mRNA reducing factor 1, putative [Trypanosoma brucei
gambiense DAL972]
Length = 842
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/198 (38%), Positives = 107/198 (54%), Gaps = 11/198 (5%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINL-PDEVYYKDPVLRPYVFFDVIHGRESH 61
L VQYRM+P + FPS H+Y+G L + + EV+ V +P F++ E
Sbjct: 603 LDVQYRMNPSLSFFPSHHYYEGTLQNGVTAEQRDASEVFPWPDVTKPIFFYNATGNEELG 662
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV--L 119
G SY N EA L E + L G+ +G+ITPY+ Q + L+ L
Sbjct: 663 SNGR-SYLNRAEA----ALTEQIVTKLIQGGVEPGDIGVITPYRSQCRYLRSYLSRSGRL 717
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH--GVGFVADIRRMNVALTRARRALWV 177
E + I++VDAFQG+E++ II+SCVR SNH G GFV D RR+NV+LTRA+R L +
Sbjct: 718 PMEVYDRVEISSVDAFQGREKEFIILSCVR-SNHRQGAGFVTDGRRLNVSLTRAKRGLII 776
Query: 178 MGNAGALTQSDDWAALIA 195
MGN ++ W L+
Sbjct: 777 MGNVQLFSRYPGWHELLV 794
>gi|431799922|ref|YP_007226826.1| type III restriction enzyme, res subunit [Echinicola vietnamensis
DSM 17526]
gi|430790687|gb|AGA80816.1| Type III restriction enzyme, res subunit [Echinicola vietnamensis
DSM 17526]
Length = 643
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 114/197 (57%), Gaps = 22/197 (11%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYY-KDPVLRPYVFFDVIHGRES 60
+L VQYRM I F S +FY G+L + L DE + D + Y+ E
Sbjct: 429 MLRVQYRMPELIMRFSSEYFYHGQLEAA----ALTDEHFLGHDERVMAYIDTAGSGFGEH 484
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKV-----TVGIITPYKLQLKCLQH-- 113
S+S N DEA+FG+ + L+K ++ +G+ T+G+I+PYK Q+K L
Sbjct: 485 LEKDSLSKLNTDEARFGLGM---LEKLVEKIGVSTFKEKAFTIGVISPYKAQVKKLAELM 541
Query: 114 ----EFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVAL 168
E+ N+ + + I T+D FQGQERDV+++S VR+++ G +GF+AD RRMNVAL
Sbjct: 542 EEGSEYENL--RQLSDHVTIGTIDGFQGQERDVVLISMVRSNDEGEIGFLADTRRMNVAL 599
Query: 169 TRARRALWVMGNAGALT 185
TRA+R L V+G++G L+
Sbjct: 600 TRAKRKLMVVGDSGTLS 616
>gi|293345814|ref|XP_002726125.1| PREDICTED: probable helicase senataxin-like [Rattus norvegicus]
Length = 2647
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 116/207 (56%), Gaps = 21/207 (10%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQ-----GRLTDSESVINLPDEVYYKDPVLRPYVFFDVI 55
+ L++QYRMHP I FPS + Y RLT++ I E ++ PY+ FDV
Sbjct: 2229 LQLTIQYRMHPDICLFPSNYVYNKNLKTNRLTET---IRCSSEWPFQ-----PYLVFDVG 2280
Query: 56 HGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEF 115
G E S Y NV E K + + + +++ K + +GIIT YK Q +Q +
Sbjct: 2281 DGSEQRDNDS--YINVQEIKLVMEIIKLIKEKRKDISFR--NIGIITHYKAQKTMIQKDL 2336
Query: 116 RNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRAS--NHGVGFVADIRRMNVALTRARR 173
+ + + ++TVDAFQG+++D II++CVRAS +GF+A ++R+NV +TRA+
Sbjct: 2337 EKEFDKKGPAE--VDTVDAFQGRQKDCIIVTCVRASAVQGSIGFLASLQRLNVTITRAKY 2394
Query: 174 ALWVMGNAGALTQSDDWAALIADSKAR 200
+L+++G+ L ++ W LI D++ R
Sbjct: 2395 SLFILGHLRTLMENQHWYELIQDAQKR 2421
>gi|109467976|ref|XP_342401.3| PREDICTED: probable helicase senataxin-like [Rattus norvegicus]
Length = 2647
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 116/207 (56%), Gaps = 21/207 (10%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQ-----GRLTDSESVINLPDEVYYKDPVLRPYVFFDVI 55
+ L++QYRMHP I FPS + Y RLT++ I E ++ PY+ FDV
Sbjct: 2229 LQLTIQYRMHPDICLFPSNYVYNKNLKTNRLTET---IRCSSEWPFQ-----PYLVFDVG 2280
Query: 56 HGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEF 115
G E S Y NV E K + + + +++ K + +GIIT YK Q +Q +
Sbjct: 2281 DGSEQRDNDS--YINVQEIKLVMEIIKLIKEKRKDISFR--NIGIITHYKAQKTMIQKDL 2336
Query: 116 RNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRAS--NHGVGFVADIRRMNVALTRARR 173
+ + + ++TVDAFQG+++D II++CVRAS +GF+A ++R+NV +TRA+
Sbjct: 2337 EKEFDKKGPAE--VDTVDAFQGRQKDCIIVTCVRASAVQGSIGFLASLQRLNVTITRAKY 2394
Query: 174 ALWVMGNAGALTQSDDWAALIADSKAR 200
+L+++G+ L ++ W LI D++ R
Sbjct: 2395 SLFILGHLRTLMENQHWYELIQDAQKR 2421
>gi|354502821|ref|XP_003513480.1| PREDICTED: probable helicase senataxin [Cricetulus griseus]
Length = 2635
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 114/204 (55%), Gaps = 15/204 (7%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSE--SVINLPDEVYYKDPVLRPYVFFDVIHGR 58
+ L++QYRMHP I FPS + Y L + I E ++ PY+ FDV G
Sbjct: 2218 LQLTIQYRMHPDICLFPSNYVYNKNLKTNRMTETIRCSSEWPFQ-----PYLVFDV--GD 2270
Query: 59 ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV 118
S R + SY NV E K + + + ++ K + +GIIT YK Q +Q +
Sbjct: 2271 GSERRDNDSYINVQEIKLVMEIIKLIKD--KRKDISSRNIGIITHYKAQKTMIQKDLEKE 2328
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRAS--NHGVGFVADIRRMNVALTRARRALW 176
+ + + ++TVDAFQG+++D II++CVRAS +GF+A ++R+NV +TRA+ +L+
Sbjct: 2329 FDKKGPAE--VDTVDAFQGRQKDCIIVTCVRASAVQGSIGFLASLQRLNVTITRAKYSLF 2386
Query: 177 VMGNAGALTQSDDWAALIADSKAR 200
++G+ L ++ W LI D++ R
Sbjct: 2387 ILGHLRTLMENQHWYELIQDAQKR 2410
>gi|388580348|gb|EIM20663.1| hypothetical protein WALSEDRAFT_54922 [Wallemia sebi CBS 633.66]
Length = 941
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 111/207 (53%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + +FPS FY+G L + + L V + P+ +FF G+E
Sbjct: 600 LQVQYRMHPCLSEFPSNMFYEGTLQNGVTAPERLRKNVDFPWPIPDTPMFFYQNLGQEEI 659
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
S+ N EA C E + G+ +GI+TPY+ Q + + +F L
Sbjct: 660 SSSGTSFLNRTEA--SNC--EKIVTKFFKAGVVPAQIGIVTPYEGQRSYIVNYMQFNGAL 715
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
E + + +VDAFQG+E+D II+SCVR++ H G+GF++D RR+NVA+TRA+ ++
Sbjct: 716 KKELYNQVEVASVDAFQGREKDYIILSCVRSNEHQGIGFLSDPRRLNVAMTRAKYGAVIL 775
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN L++ W L+ K + ++
Sbjct: 776 GNPKILSKHPLWHHLLTHFKEKKTLVE 802
>gi|224373108|ref|YP_002607480.1| putative DNA helicase [Nautilia profundicola AmH]
gi|223589915|gb|ACM93651.1| putative DNA helicase [Nautilia profundicola AmH]
Length = 648
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/211 (36%), Positives = 111/211 (52%), Gaps = 17/211 (8%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINL--------PDEVYYKDPVLRPYVFFDV 54
L +QYRM+ I +FPS FY ++ E + N+ PD Y P VF D
Sbjct: 442 LGIQYRMNEKINEFPSCKFYDCKVKTYEEIKNITIKDLNIQPDSEYGD---YEPVVFIDT 498
Query: 55 I-HGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH 113
E + S S N EA+F V L E L K G + +GIITPYK + ++
Sbjct: 499 CGKFMEKSKKDSPSKYNPKEAEFVVSLVEKLLKN----GAKEEHIGIITPYKDHEEYIKK 554
Query: 114 EFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRAR 172
+ L+ L + +VD FQG+E+++II+S VRA+ +GF++DIRR+NVA+TRA+
Sbjct: 555 VISSHLHDFTTSLLEVKSVDGFQGREKEIIILSLVRANEKEEIGFLSDIRRLNVAITRAK 614
Query: 173 RALWVMGNAGALTQSDDWAALIADSKARNCY 203
R L ++G+A L +D + LI K Y
Sbjct: 615 RKLVIIGDAKTLLVNDTYKNLIEYIKKNGVY 645
>gi|432116570|gb|ELK37363.1| Putative helicase senataxin [Myotis davidii]
Length = 2648
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/207 (37%), Positives = 116/207 (56%), Gaps = 21/207 (10%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
+ L+VQYRMHP I FPS + Y L + + + +PY+ FDV G S
Sbjct: 2233 LQLTVQYRMHPDICLFPSNYIYNKSLKTNRGTESARCSSSWP---FQPYLVFDV--GDGS 2287
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQ----LKCLQHEFR 116
R + SY N+ E K + L + L+ K + VGIIT YK Q LK L EF
Sbjct: 2288 ERRENDSYVNIQEIKVVMELIKLLKDRGKDVNFR--NVGIITHYKAQKMKILKELDKEF- 2344
Query: 117 NVLNSEEGKDLY-INTVDAFQGQERDVIIMSCVRAS--NHGVGFVADIRRMNVALTRARR 173
EG+ L ++TVDAFQG+++D II++CVRA+ +GF+A ++R+NVA+TRA+
Sbjct: 2345 ------EGRGLAEVDTVDAFQGRQKDCIIVTCVRANAIQGSIGFLASLQRLNVAITRAKY 2398
Query: 174 ALWVMGNAGALTQSDDWAALIADSKAR 200
+L+++G+ L + W LI D++ R
Sbjct: 2399 SLFILGHLRTLMDNQHWNHLIQDAQRR 2425
>gi|325184899|emb|CCA19391.1| RNA helicase putative [Albugo laibachii Nc14]
Length = 1058
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 108/196 (55%), Gaps = 8/196 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLP-DEVYYKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + +FPS FY+G L + S V + P FF + G E
Sbjct: 678 LRVQYRMHPCLSEFPSNTFYEGELQNGVSSTERQLKNVDFPWPNPNKPTFFYICLGAEEI 737
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLK-CLQHEFRN-VL 119
SY N EA E + G+ +G+ITPY+ Q + + RN +
Sbjct: 738 SSSGTSYLNRTEASN----VEKIVTAFLKCGVLPAQIGVITPYEGQRAYVVNYMQRNGSM 793
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRALWVM 178
++ KD+ + +VD+FQG+E+D+II+SCVR++ N G+GF++D RR+NVALTRA+ + ++
Sbjct: 794 RAQLYKDVEVASVDSFQGREKDLIILSCVRSNENQGIGFLSDRRRLNVALTRAKYGVIIL 853
Query: 179 GNAGALTQSDDWAALI 194
GN L + + W L+
Sbjct: 854 GNPRVLAKQELWNRLL 869
>gi|365759093|gb|EHN00906.1| Nam7p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1033
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 120/216 (55%), Gaps = 16/216 (7%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVI--NLPDEVYYKDPVLRPYVFFDVIHGRES 60
L VQYRM+P++ +FPS FY+G L + ++ +P+ + P+ + F +GRE
Sbjct: 696 LEVQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTVPNS-KFPWPIRGIPMMFWANYGREE 754
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
S+ N EA C E + L G+ +G+ITPY+ Q + + +N
Sbjct: 755 ISANGTSFLNRIEAMN--C--ERIITKLFRDGVKPEQIGVITPYEGQRAYILQYMQ--MN 808
Query: 121 SEEGKDLYIN----TVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRAL 175
KDLYIN +VDAFQG+E+D II+SCVRA+ +GF+ D RR+NV LTRA+ L
Sbjct: 809 GSLDKDLYINVEVASVDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAKYGL 868
Query: 176 WVMGNAGALTQSDDWAALIADSKARNCYMD--MDSL 209
++GN +L ++ W L+ + + C ++ +D+L
Sbjct: 869 VILGNPRSLARNTLWNHLLIHFREKGCLVEGTLDNL 904
>gi|340504056|gb|EGR30545.1| hypothetical protein IMG5_129630 [Ichthyophthirius multifiliis]
Length = 801
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/217 (35%), Positives = 117/217 (53%), Gaps = 26/217 (11%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINL---PDEVYYKDPVLRPYVFFDVIHGR 58
+L QYRM+P I F S FY+G++ D++ + + P+ +Y+ + P V +V
Sbjct: 571 MLKQQYRMNPIISKFISNTFYEGKIDDAQKIKEIVGNPE--FYQFRIFSPIVVLNVNGNE 628
Query: 59 ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV 118
H+ SY+N +E++ V +Y L+K S L ++ GIITPY Q+ E R
Sbjct: 629 IFHKS---SYKNEEESEAIVEIYAQLKKRFPSFDLTQL--GIITPYSSQV----SEIRRK 679
Query: 119 LNSEEGKD---LYINTVDAFQGQERDVIIMSCVRAS--------NHGVGFVADIRRMNVA 167
+ +G D + ++TVD FQG+E+D+II S VRAS +GF+ D RRMNV+
Sbjct: 680 IKQFDGTDKCLVEVHTVDGFQGREKDIIIFSTVRASIQNGVKNNKKTIGFLNDKRRMNVS 739
Query: 168 LTRARRALWVMGNAGALTQSDDWAALIADSKARN-CY 203
L+RAR +L V+G+ L S W L S N CY
Sbjct: 740 LSRARLSLIVVGDLKQLKYSKLWKGLAEYSLQLNSCY 776
>gi|325104103|ref|YP_004273757.1| ATPase AAA [Pedobacter saltans DSM 12145]
gi|324972951|gb|ADY51935.1| AAA ATPase [Pedobacter saltans DSM 12145]
Length = 629
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/210 (35%), Positives = 117/210 (55%), Gaps = 22/210 (10%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL+ QYRM+ I D+PS Y+ +L SV ++ KD P F D
Sbjct: 425 LLTTQYRMNKEINDYPSIELYESKLHADRSVAT--RKLDQKDI---PVEFVDTAGCSFDE 479
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
+ S N +EA F + +HL L++ K +V +I+PYK Q++ L+
Sbjct: 480 KINGTSVYNPEEANFTL---KHLTGLLQNHNKAKYSVAVISPYKQQVELLKELI------ 530
Query: 122 EEGKDLY-------INTVDAFQGQERDVIIMSCVRA-SNHGVGFVADIRRMNVALTRARR 173
E+ +DL INT+D+FQGQERD++ +S R+ S + +GF++DIRRMNVA+TRAR
Sbjct: 531 EDWEDLKPFLAQIDINTIDSFQGQERDIVYISLTRSNSENAIGFLSDIRRMNVAITRARM 590
Query: 174 ALWVMGNAGALTQSDDWAALIADSKARNCY 203
L V+G++G L+++ ++ I+ ++ N Y
Sbjct: 591 KLVVIGDSGTLSKNAFYSDFISYTEKINGY 620
>gi|402470074|gb|EJW04529.1| hypothetical protein EDEG_01257 [Edhazardia aedis USNM 41457]
Length = 534
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 114/212 (53%), Gaps = 20/212 (9%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPY-VFFDVIHGRES 60
LL++QYRMHP + ++PS FY+G L + S E + + P+ FF V +G E
Sbjct: 312 LLNMQYRMHPKLAEWPSNTFYEGSLKNGIS------ESKRLNRTVLPFPTFFYVCYGLEE 365
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
SY N EA + E + K+L G+ + +G+ITPY+ Q + +
Sbjct: 366 LSASGTSYLNQTEA----LVTEEIIKSLVKSGISEKQIGVITPYEGQRVFILNRLTKT-- 419
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASN-HGVGFVADIRRMNVALTRARRALWVMG 179
S + ++L I VDA+QG+E+D II+S VR++ G+GF+ D RR+NV LTRA+ ++G
Sbjct: 420 SLKLENLEIKNVDAYQGREKDYIIISLVRSNQKQGIGFLNDERRLNVTLTRAKYGCCIIG 479
Query: 180 NAGALTQSDDWAALIADSKARNCYMDMDSLPK 211
N L ++ WA I N Y D D + K
Sbjct: 480 NPNTLYKNKMWANFI------NFYQDRDMIYK 505
>gi|194865311|ref|XP_001971366.1| GG14918 [Drosophila erecta]
gi|190653149|gb|EDV50392.1| GG14918 [Drosophila erecta]
Length = 1681
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 111/205 (54%), Gaps = 18/205 (8%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESHR 62
LS+QYRMHP I +P+++FY+ +L ++E L PY ++ + +++
Sbjct: 1472 LSMQYRMHPEICRWPNKYFYEDQLINAECTARFAS-------ALIPYCVINLKYTQDNSC 1524
Query: 63 GGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNSE 122
+ S N +EA+F L LQ+ K M + + G+I+PY+ Q L N +N
Sbjct: 1525 AQTKSISNDEEARFVAKL---LQEMDKHMPSKRFSYGLISPYQNQCYVLSQLIPNHMN-- 1579
Query: 123 EGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGNAG 182
+ TVD++QG E+DVII+S R G GF+ + +R+NVALTR RR L + GN
Sbjct: 1580 ----ITPQTVDSYQGLEKDVIIISNART--RGCGFLTNYQRLNVALTRPRRCLVICGNFE 1633
Query: 183 ALTQSDDWAALIADSKARNCYMDMD 207
L + W L+ D+++R Y D++
Sbjct: 1634 DLKTVEMWRNLLDDARSRKVYFDIE 1658
>gi|442323516|ref|YP_007363537.1| DNA helicase [Myxococcus stipitatus DSM 14675]
gi|441491158|gb|AGC47853.1| DNA helicase [Myxococcus stipitatus DSM 14675]
Length = 637
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/209 (38%), Positives = 115/209 (55%), Gaps = 16/209 (7%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN--LPDEVYYKDPVLRPYVFFDVIHGR 58
MLL QYRM+ I DFPSR Y G+L SV + L D + V P V F G+
Sbjct: 429 MLLE-QYRMNTRIMDFPSREMYGGQLRAHPSVADRTLADVLPPGTEVDAPPVLFLDTAGK 487
Query: 59 ---ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEF 115
E + S N EA L E + L ++GL + + +ITPY Q H
Sbjct: 488 GFDEEVEPTTRSLFNTGEAD----LIEARVRALLALGLSQRELAVITPYSAQ----AHRL 539
Query: 116 RNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRA 174
R L S D+ ++T+DAFQG+E+D +++S R+++ G VGF+ D+RRMNVALTRARR
Sbjct: 540 RERLESF-APDVEVDTMDAFQGREKDAVLVSLTRSNSEGQVGFLNDLRRMNVALTRARRH 598
Query: 175 LWVMGNAGALTQSDDWAALIADSKARNCY 203
L+V+G++ L+ +A I +S+A Y
Sbjct: 599 LFVVGDSATLSGHPFYARFIEESQAHGGY 627
>gi|302309402|ref|NP_986774.2| AGR108Cp [Ashbya gossypii ATCC 10895]
gi|299788342|gb|AAS54598.2| AGR108Cp [Ashbya gossypii ATCC 10895]
gi|374110024|gb|AEY98929.1| FAGR108Cp [Ashbya gossypii FDAG1]
Length = 930
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/218 (37%), Positives = 115/218 (52%), Gaps = 27/218 (12%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
L +QYRMHP I +FP+ FY RL + + P++ + V P VF D+ E
Sbjct: 713 FLKIQYRMHPAICEFPNMQFYDNRLRNGVT----PEDRSWLG-VQEPVVFIDIPSSAE-R 766
Query: 62 RGGSVSYQ-----NVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQ---- 112
RG + + Q N+ EA F VC L+K + + +G+ITPY Q +
Sbjct: 767 RGQAAASQDMSWCNLAEADF-VC--ATLRKLVSKKHVPPSQIGVITPYVAQRDAIASRLA 823
Query: 113 -------HEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRM 164
H + + + K L + +VDAFQG ER II SCVR+++ G +GFV+D RRM
Sbjct: 824 RDTTLAAHVTMHEVADPDSKQLMVASVDAFQGHERAFIIFSCVRSNSDGQLGFVSDRRRM 883
Query: 165 NVALTRARRALWVMGNAGALTQ-SDDWAALIADSKARN 201
NVALTRAR L V+G+A L + S W A I ++R+
Sbjct: 884 NVALTRARNGLIVVGHADTLAKGSKIWRAYITYLRSRD 921
>gi|302143701|emb|CBI22562.3| unnamed protein product [Vitis vinifera]
Length = 977
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/215 (35%), Positives = 113/215 (52%), Gaps = 16/215 (7%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLR-----PYVFFDVIH 56
LL VQYRMHP I FP+ FY+G + ++ V E Y L P+ F +V
Sbjct: 595 LLDVQYRMHPSISLFPNNEFYEGDIINAPKV----KEAIYSRRFLHGNMYGPFSFINVAS 650
Query: 57 GRESHRGGSV--SYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHE 114
+V S +N+ E + L + K+ KV+VGII+PYK Q+ +Q +
Sbjct: 651 TVPELEEFNVRHSSKNMVEVAVVSQIIASLFEETKARK-EKVSVGIISPYKAQVHEIQKK 709
Query: 115 FRNV--LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRA 171
++E + ++TVD FQG E DVII+S VR ++ G +GFV + RR NV+LTRA
Sbjct: 710 LGKAYSTDAESQFSIKVSTVDGFQGDEEDVIIISTVRCNSGGHIGFVKNYRRANVSLTRA 769
Query: 172 RRALWVMGNAGALTQSDD-WAALIADSKARNCYMD 205
R LW+ GNA L S W ++ +K + C+ +
Sbjct: 770 RHCLWITGNAKTLEDSHSVWEKVVQHAKGQRCFYN 804
>gi|256421450|ref|YP_003122103.1| ATPase AAA [Chitinophaga pinensis DSM 2588]
gi|256036358|gb|ACU59902.1| AAA ATPase [Chitinophaga pinensis DSM 2588]
Length = 635
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 117/213 (54%), Gaps = 21/213 (9%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN---LPDEVYYKDPVLRPYVFFDVIHG 57
+LL QYRMH I + S FY +L SV PD++ P F D
Sbjct: 425 VLLEEQYRMHEMIMGYSSAVFYADKLKAHASVAAHTLFPDDM--------PLSFVDTAGC 476
Query: 58 RESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKV-----TVGIITPYKLQLKCLQ 112
+ S N +EA F L++HL++ + + ++ II+PYK Q+ L+
Sbjct: 477 GFDEKTEGTSTTNPEEAAF---LFKHLRQFVTGLHTHYQPQQFPSIAIISPYKQQIHILK 533
Query: 113 HEFRNVLNSEE-GKDLYINTVDAFQGQERDVIIMSCVRASN-HGVGFVADIRRMNVALTR 170
+ +V + G + +NT+D+FQGQERD++ +S R++N + +GF++DIRRMNVA+TR
Sbjct: 534 EQLLSVPELQAYGDRISVNTIDSFQGQERDIVYISMTRSNNDNKIGFLSDIRRMNVAMTR 593
Query: 171 ARRALWVMGNAGALTQSDDWAALIADSKARNCY 203
AR+ L ++G++ L+Q +A IA ++ +N Y
Sbjct: 594 ARKKLVIIGDSATLSQLPFYAGFIAYAEQQNAY 626
>gi|261402463|ref|YP_003246687.1| DNA helicase [Methanocaldococcus vulcanius M7]
gi|261369456|gb|ACX72205.1| DNA helicase [Methanocaldococcus vulcanius M7]
Length = 651
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 115/215 (53%), Gaps = 31/215 (14%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLP-------DEVYYKDPVLR---PYVF 51
+L +QYRM+ I +FP+R FY +L ESV N+ +E+ D + P F
Sbjct: 449 ILEIQYRMNEKIMEFPNRMFYDNKLKADESVKNITLLDLVKEEEIEETDKSIVNKIPVQF 508
Query: 52 FDVIHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCL 111
+V G+E S SY N++EA+ +++ ++K LK ++ + +ITPY Q++ L
Sbjct: 509 INV-EGKERRDKESYSYYNIEEAE---QVFDIVKKLLKY----RIPISVITPYDAQVRYL 560
Query: 112 QHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRA 171
+ F E D+ +NTVD FQG+E + I++S VR G F+ D+RR+NVA+TR
Sbjct: 561 RSMF-----EENNIDVEVNTVDGFQGRENETIVISFVRTEKFG--FLKDLRRLNVAITRP 613
Query: 172 RRALWVMGNAGALTQSD------DWAALIADSKAR 200
+R L ++GN L Q WA + + K R
Sbjct: 614 KRKLVLIGNENLLKQDKIYNEMIKWAKSVENEKIR 648
>gi|380810832|gb|AFE77291.1| putative helicase senataxin [Macaca mulatta]
Length = 2680
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 114/202 (56%), Gaps = 11/202 (5%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
+ L+VQYRMHP I FPS + Y L + + D +PY+ FDV G S
Sbjct: 2255 LQLTVQYRMHPDICLFPSNYIYNRNLKTNRQTETI---RCSSDWPFQPYLVFDV--GDGS 2309
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
R + SY NV E K + + + ++ K + +GIIT YK Q +Q + +
Sbjct: 2310 ERRDNDSYINVQEIKLVMEIIKLIKDKRKDVSFR--NIGIITHYKAQKTMIQKDLDKEFD 2367
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNH--GVGFVADIRRMNVALTRARRALWVM 178
+ + ++TVDAFQG+++D +I++CVRA++ +GF+A ++R+NV +TRA+ +L+++
Sbjct: 2368 RKGPAE--VDTVDAFQGRQKDCVIVTCVRANSGQGSIGFLASLQRLNVTITRAKYSLFIL 2425
Query: 179 GNAGALTQSDDWAALIADSKAR 200
G+ L ++ W LI D++ R
Sbjct: 2426 GHLRTLMENQHWNQLIQDAQKR 2447
>gi|383416785|gb|AFH31606.1| putative helicase senataxin [Macaca mulatta]
Length = 2680
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 114/202 (56%), Gaps = 11/202 (5%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
+ L+VQYRMHP I FPS + Y L + + D +PY+ FDV G S
Sbjct: 2255 LQLTVQYRMHPDICLFPSNYIYNRNLKTNRQTETI---RCSSDWPFQPYLVFDV--GDGS 2309
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
R + SY NV E K + + + ++ K + +GIIT YK Q +Q + +
Sbjct: 2310 ERRDNDSYINVQEIKLVMEIIKLIKDKRKDVSFR--NIGIITHYKAQKTMIQKDLDKEFD 2367
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNH--GVGFVADIRRMNVALTRARRALWVM 178
+ + ++TVDAFQG+++D +I++CVRA++ +GF+A ++R+NV +TRA+ +L+++
Sbjct: 2368 RKGPAE--VDTVDAFQGRQKDCVIVTCVRANSGQGSIGFLASLQRLNVTITRAKYSLFIL 2425
Query: 179 GNAGALTQSDDWAALIADSKAR 200
G+ L ++ W LI D++ R
Sbjct: 2426 GHLRTLMENQHWNQLIQDAQKR 2447
>gi|195492751|ref|XP_002094125.1| GE20371 [Drosophila yakuba]
gi|194180226|gb|EDW93837.1| GE20371 [Drosophila yakuba]
Length = 1699
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 113/205 (55%), Gaps = 18/205 (8%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESHR 62
LS+QYRMHP I +P+++FY+ +L ++E + P++ PY ++ + +++
Sbjct: 1490 LSMQYRMHPEICRWPNQYFYEDQLINAECT------ARFASPLI-PYCVINLKYTQDNSG 1542
Query: 63 GGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNSE 122
+ S N +EA+F L + K + S + + G+I+PY+ Q L + +N
Sbjct: 1543 AQNKSISNDEEARFVAKLLTEMDKHMPSQ---QFSYGLISPYQNQCYALSQVIPSHMN-- 1597
Query: 123 EGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGNAG 182
L TVD++QG E+DVII+S R G GF+ + +R+NVALTR RR L + GN
Sbjct: 1598 ----LTPQTVDSYQGLEKDVIIISNART--RGCGFLTNYQRLNVALTRPRRCLVICGNFD 1651
Query: 183 ALTQSDDWAALIADSKARNCYMDMD 207
L + W L+ D+++R Y DM+
Sbjct: 1652 DLKSVEMWRNLLDDARSRKVYFDME 1676
>gi|145343349|ref|XP_001416310.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576535|gb|ABO94603.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 315
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 79/225 (35%), Positives = 115/225 (51%), Gaps = 35/225 (15%)
Query: 6 QYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLR--------PYVFFDVI-- 55
QYRMHP I FPS FY+G L + Y+D V PY FF+V
Sbjct: 100 QYRMHPDIVKFPSERFYRGLLRSGAGAL-------YEDRVAPWHSFSNCGPYQFFNVKGQ 152
Query: 56 HGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEF 115
++ + G+ S+ N EA+F Y+ + + + + +V VGIITPY Q++ L+ +F
Sbjct: 153 MNQDRYETGARSFSNSAEAEFASYCYKKIAVSAQ-LHKSEVKVGIITPYLDQVRRLR-DF 210
Query: 116 RNVLNSEEGK-----DLYINTVDAFQGQERDVIIMSCVRA-----------SNHGVGFVA 159
L ++G + TVD QGQE D +I+SCVRA N +GF+
Sbjct: 211 VEPLLKKDGALRTWAHVTYGTVDQVQGQEFDAVIISCVRAYPEGDKVAPDPPNTDIGFLR 270
Query: 160 DIRRMNVALTRARRALWVMGNAGALTQSDDWAALIADSKARNCYM 204
D RR+NVALTR R + W++G A L + W LI ++K RN ++
Sbjct: 271 DERRLNVALTRGRYSTWIVGYAEVLKREAVWLDLIENAKTRNVFV 315
>gi|402896228|ref|XP_003911208.1| PREDICTED: probable helicase senataxin [Papio anubis]
Length = 2679
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 114/202 (56%), Gaps = 11/202 (5%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
+ L+VQYRMHP I FPS + Y L + + D +PY+ FDV G S
Sbjct: 2255 LQLTVQYRMHPDICLFPSNYIYNRNLKTNRQTETI---RCSSDWPFQPYLVFDV--GDGS 2309
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
R + SY NV E K + + + ++ K + +GIIT YK Q +Q + +
Sbjct: 2310 ERRDNDSYINVQEIKLVMEIIKLIKDKRKDVSFR--NIGIITHYKAQKTMIQKDLDKEFD 2367
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASN--HGVGFVADIRRMNVALTRARRALWVM 178
+ + ++TVDAFQG+++D +I++CVRA++ +GF+A ++R+NV +TRA+ +L+++
Sbjct: 2368 RKGPAE--VDTVDAFQGRQKDCVIVTCVRANSVQGSIGFLASLQRLNVTITRAKYSLFIL 2425
Query: 179 GNAGALTQSDDWAALIADSKAR 200
G+ L ++ W LI D++ R
Sbjct: 2426 GHLRTLMENQHWNQLIQDAQKR 2447
>gi|426222918|ref|XP_004005627.1| PREDICTED: probable helicase senataxin [Ovis aries]
Length = 2662
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 113/202 (55%), Gaps = 11/202 (5%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
+ L++QYRMHP I FPS + Y G L + D +PY+ FDV G E
Sbjct: 2242 LQLTIQYRMHPDICLFPSSYVYDGALKTNRGT---ETSRCSSDWPFQPYLVFDVGDGLE- 2297
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
R + SY NV E K + L + ++ + + +GIIT YK Q +Q + +
Sbjct: 2298 -RRDNDSYVNVQEIKLVMELIKLIKDKRRDINFR--NIGIITHYKAQKTMIQKDLDKEFD 2354
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRA--SNHGVGFVADIRRMNVALTRARRALWVM 178
+ + ++TVDAFQG+++D +I++CVRA + +GF+A ++R+NV +TRA+ +L+++
Sbjct: 2355 RKGAAE--VDTVDAFQGRQKDCVIVTCVRANATQGSIGFLASLQRLNVTITRAKYSLFIL 2412
Query: 179 GNAGALTQSDDWAALIADSKAR 200
G+ L ++ W LI D++ R
Sbjct: 2413 GHLRTLVENRHWYHLIQDAQKR 2434
>gi|225462691|ref|XP_002267110.1| PREDICTED: uncharacterized protein LOC100257019 [Vitis vinifera]
Length = 1143
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/213 (36%), Positives = 112/213 (52%), Gaps = 16/213 (7%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLR-----PYVFFDVIH 56
LL VQYRMHP I FP+ FY+G + ++ V E Y L P+ F +V
Sbjct: 761 LLDVQYRMHPSISLFPNNEFYEGDIINAPKV----KEAIYSRRFLHGNMYGPFSFINVAS 816
Query: 57 GRESHRGGSV--SYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHE 114
+V S +N+ E + L + K+ KV+VGII+PYK Q+ +Q +
Sbjct: 817 TVPELEEFNVRHSSKNMVEVAVVSQIIASLFEETKARK-EKVSVGIISPYKAQVHEIQKK 875
Query: 115 FRNV--LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRA 171
++E + ++TVD FQG E DVII+S VR ++ G +GFV + RR NV+LTRA
Sbjct: 876 LGKAYSTDAESQFSIKVSTVDGFQGDEEDVIIISTVRCNSGGHIGFVKNYRRANVSLTRA 935
Query: 172 RRALWVMGNAGALTQSDD-WAALIADSKARNCY 203
R LW+ GNA L S W ++ +K + C+
Sbjct: 936 RHCLWITGNAKTLEDSHSVWEKVVQHAKGQRCF 968
>gi|320168749|gb|EFW45648.1| RENT1 [Capsaspora owczarzaki ATCC 30864]
Length = 1120
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 78/206 (37%), Positives = 108/206 (52%), Gaps = 9/206 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLRPYVFFDVIHGRESH 61
L +QYRMHP + FPS FY+G L + + P + P +FF G+E
Sbjct: 728 LEIQYRMHPCLSAFPSDTFYEGSLQNGVLAADRTPKTPAFTWPDPNNPMFFWSNLGQEEL 787
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLK-CLQHEFRN-VL 119
SY N EA E L L G +G+ITPY+ Q LQ N VL
Sbjct: 788 SASGTSYLNRAEASS----VEKLVTQLLKSGTKPDQIGVITPYEGQRAFILQTMTANGVL 843
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMG 179
S+ + + + +VDAFQG+E+D II+SCVR++ G+GF+ D RR+NVALTRAR L V+G
Sbjct: 844 RSQLYQQIEVASVDAFQGREKDYIILSCVRSA--GIGFLNDPRRLNVALTRARYGLVVIG 901
Query: 180 NAGALTQSDDWAALIADSKARNCYMD 205
NA L + W +I + +M+
Sbjct: 902 NAHRLARDPLWNEVITYFRNHKLFME 927
>gi|405953739|gb|EKC21342.1| Regulator of nonsense transcripts 1 [Crassostrea gigas]
Length = 1108
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 110/210 (52%), Gaps = 14/210 (6%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPY----VFFDVIHGR 58
L VQYRMHP + FPS FY+G L + + D V + P +FF G+
Sbjct: 681 LQVQYRMHPALSAFPSNIFYEGSLQNG---VAPGDRVRKGLDIPWPQGDKPMFFYTTSGQ 737
Query: 59 ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFR 116
E SY N EA E + + +GIITPY+ Q + ++
Sbjct: 738 EEISSSGTSYLNRTEAAN----VEKIATRFLRSNVKPEQIGIITPYEGQRAYIVQYMQYS 793
Query: 117 NVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRAL 175
LN + +++ + +VDAFQG+E+D II+SCVR++ H G+GF+ D RR+NVALTRA+ +
Sbjct: 794 GSLNKKLYQEIEVASVDAFQGREKDFIILSCVRSNEHQGIGFLNDPRRLNVALTRAKYGI 853
Query: 176 WVMGNAGALTQSDDWAALIADSKARNCYMD 205
++GN L++ W L+ K + C ++
Sbjct: 854 IIVGNPKVLSKQPLWNHLLTYYKEQKCLVE 883
>gi|221484204|gb|EEE22500.1| regulator of nonsense transcripts 1 protein, putative [Toxoplasma
gondii GT1]
Length = 1449
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 100/196 (51%), Gaps = 19/196 (9%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKD---------PVLRPYVF 51
+ L VQYRMHP + FPS FY+G L + + + + Y+ P +F
Sbjct: 851 LRLKVQYRMHPALSFFPSYFFYEGELQNG---VTMTERTYFHQGPGDHRFPWPNEERPMF 907
Query: 52 FDVIHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCL 111
F E G SY N EA E + L GL +G+ITPY Q +
Sbjct: 908 FYHSTASEEISGSGTSYVNRIEASN----IEKIVTFLLKCGLKASQIGVITPYDGQRAHI 963
Query: 112 QHEFR--NVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRA-SNHGVGFVADIRRMNVAL 168
F+ L DL + +VDAFQG+E+D I++SCVR+ SN G+GF+AD RR+NVA+
Sbjct: 964 SSLFQRQTTLGQAAFADLEVASVDAFQGREKDFILLSCVRSNSNTGIGFLADSRRLNVAM 1023
Query: 169 TRARRALWVMGNAGAL 184
TRA+ L + GNA L
Sbjct: 1024 TRAKYGLIICGNATVL 1039
>gi|195325897|ref|XP_002029667.1| GM24969 [Drosophila sechellia]
gi|194118610|gb|EDW40653.1| GM24969 [Drosophila sechellia]
Length = 1405
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 111/205 (54%), Gaps = 18/205 (8%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESHR 62
LS+QYRMHP I +P+++FY+ +L ++E + P + PY ++ + R+S+
Sbjct: 1196 LSMQYRMHPEICQWPNKYFYEDQLINAECT------ARFASPFI-PYCVINLKYTRDSNG 1248
Query: 63 GGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNSE 122
+ S N +EA F L + K + S + + GII+PY+ Q L + +N
Sbjct: 1249 AQNKSISNNEEAGFVAKLLTEMDKHMPS---KRFSYGIISPYQNQCYALSQVIPSHMN-- 1303
Query: 123 EGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGNAG 182
+ TVD++QG E+DVII+S R G GF+ + +R+NVALTR RR L + GN
Sbjct: 1304 ----ITPQTVDSYQGLEKDVIIISNART--RGCGFLTNYQRLNVALTRPRRCLVICGNFE 1357
Query: 183 ALTQSDDWAALIADSKARNCYMDMD 207
L + W L+ D++ R Y ++D
Sbjct: 1358 DLKSVEMWRNLLDDARKRKVYFNLD 1382
>gi|221505815|gb|EEE31460.1| regulator or nonsense transcripts RENT1, putative [Toxoplasma gondii
VEG]
Length = 1449
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 100/196 (51%), Gaps = 19/196 (9%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKD---------PVLRPYVF 51
+ L VQYRMHP + FPS FY+G L + + + + Y+ P +F
Sbjct: 851 LRLKVQYRMHPALSFFPSYFFYEGELQNG---VTMTERTYFHQGPGDHRFPWPNEERPMF 907
Query: 52 FDVIHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCL 111
F E G SY N EA E + L GL +G+ITPY Q +
Sbjct: 908 FYHSTASEEISGSGTSYVNRIEASN----IEKIVTFLLKCGLKASQIGVITPYDGQRAHI 963
Query: 112 QHEFR--NVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRA-SNHGVGFVADIRRMNVAL 168
F+ L DL + +VDAFQG+E+D I++SCVR+ SN G+GF+AD RR+NVA+
Sbjct: 964 SSLFQRQTTLGQAAFADLEVASVDAFQGREKDFILLSCVRSNSNTGIGFLADSRRLNVAM 1023
Query: 169 TRARRALWVMGNAGAL 184
TRA+ L + GNA L
Sbjct: 1024 TRAKYGLIICGNATVL 1039
>gi|237838453|ref|XP_002368524.1| regulator of nonsense transcripts UPF1, putative [Toxoplasma gondii
ME49]
gi|211966188|gb|EEB01384.1| regulator of nonsense transcripts UPF1, putative [Toxoplasma gondii
ME49]
Length = 1449
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 100/196 (51%), Gaps = 19/196 (9%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKD---------PVLRPYVF 51
+ L VQYRMHP + FPS FY+G L + + + + Y+ P +F
Sbjct: 851 LRLKVQYRMHPALSFFPSYFFYEGELQNG---VTMTERTYFHQGPGDHRFPWPNEERPMF 907
Query: 52 FDVIHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCL 111
F E G SY N EA E + L GL +G+ITPY Q +
Sbjct: 908 FYHSTASEEISGSGTSYVNRVEASN----IEKIVTFLLKCGLKASQIGVITPYDGQRAHI 963
Query: 112 QHEFR--NVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRA-SNHGVGFVADIRRMNVAL 168
F+ L DL + +VDAFQG+E+D I++SCVR+ SN G+GF+AD RR+NVA+
Sbjct: 964 SSLFQRQTTLGQAAFADLEVASVDAFQGREKDFILLSCVRSNSNTGIGFLADSRRLNVAM 1023
Query: 169 TRARRALWVMGNAGAL 184
TRA+ L + GNA L
Sbjct: 1024 TRAKYGLIICGNATVL 1039
>gi|344230553|gb|EGV62438.1| hypothetical protein CANTEDRAFT_115904 [Candida tenuis ATCC 10573]
Length = 305
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 75/209 (35%), Positives = 111/209 (53%), Gaps = 10/209 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLRPYVFFDVIHGRESH 61
L VQYRM+P + +FPS FY+G L D +V + L + PV F +G+E
Sbjct: 9 LEVQYRMNPALSEFPSNMFYEGSLQDGVTVEDRLIKNSTFPWPVQDIPSMFWANYGKEEI 68
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
G S+ N EA E + L G+ +GIITPY+ Q +
Sbjct: 69 SGSGSSFLNRVEA----MRVEKVVNRLFEDGVKGDQIGIITPYEGQQSFVTRYLATNATQ 124
Query: 122 EEGKDLYIN----TVDAFQGQERDVIIMSCVRASN-HGVGFVADIRRMNVALTRARRALW 176
+ KD Y++ +VDAFQG+E+D II+SCVRA+ +GF+ D RR+NVALTRA+ +
Sbjct: 125 TQYKDEYLSIEVASVDAFQGREKDFIILSCVRANEAQVIGFLRDPRRLNVALTRAKYGMI 184
Query: 177 VMGNAGALTQSDDWAALIADSKARNCYMD 205
V+GN L+++ W L+ + R C ++
Sbjct: 185 VLGNPRTLSRNPLWNHLLVHYRERGCLVE 213
>gi|326677548|ref|XP_690945.4| PREDICTED: probable helicase senataxin [Danio rerio]
Length = 2310
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 121/236 (51%), Gaps = 44/236 (18%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFY--------QGRLTDSESVINLPD-------------EV 39
+LLS+QYRMHP I +FPS++ Y QG+ + + + + E
Sbjct: 1942 LLLSMQYRMHPDICEFPSKYIYNSALKNDWQGQCRQEQEIRTVSEFRLLRSLSGPCVCET 2001
Query: 40 YYKDPVL----RPYVFFDVIHGRES-HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLG 94
K L +PY FDV+ GRE+ R ++++ V + L Q
Sbjct: 2002 AQKRCSLSWPFKPYKVFDVMDGRETKERDSFINHKEVSLVGLLLKLLCKEQA-------- 2053
Query: 95 KVTVGIITPYKLQLKCLQHEFRNVLNSE---EGKDLYINTVDAFQGQERDVIIMSCVRAS 151
V VG+ITPY Q +H + + + + + ++TVD FQG+E D II+SCVRAS
Sbjct: 2054 -VRVGVITPYNAQ----KHRILDAIKTSGINKQLQVEVDTVDGFQGREMDCIIVSCVRAS 2108
Query: 152 NH--GVGFVADIRRMNVALTRARRALWVMGNAGALTQSDDWAALIADSKARNCYMD 205
+ +GFV + +RMNV +TRA+ +L+++G+ L + DW ALI D+ R C ++
Sbjct: 2109 SEMGSIGFVGNRQRMNVTITRAKFSLFILGHLRTLREQSDWGALIEDAGRRECIIN 2164
>gi|71417104|ref|XP_810474.1| regulator of nonsense transcripts 1 [Trypanosoma cruzi strain CL
Brener]
gi|70875009|gb|EAN88623.1| regulator of nonsense transcripts 1, putative [Trypanosoma cruzi]
Length = 839
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 78/202 (38%), Positives = 111/202 (54%), Gaps = 18/202 (8%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTD--SESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
L VQYRMHP + FPS FY+G L + +E + + DP RP F++ E
Sbjct: 614 LDVQYRMHPALSLFPSDQFYEGTLQNGLTEEQRDASRVFPWPDPT-RPIFFYNTTGSEEL 672
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVT---VGIITPYKLQLKCLQHEFRN 117
GS SY N EA + L + GKV +G+ITPY Q + + +
Sbjct: 673 SANGS-SYLNRAEAALTERIITKLIRD------GKVKPDDIGVITPYGGQCRYVMNYLVR 725
Query: 118 V--LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH--GVGFVADIRRMNVALTRARR 173
L + + +++VDAFQG+E++ II+SCVR SNH G+GFV D RR+NV++TRA+R
Sbjct: 726 CGPLPRTAYERVEVSSVDAFQGREKEFIILSCVR-SNHRQGIGFVVDWRRLNVSITRAKR 784
Query: 174 ALWVMGNAGALTQSDDWAALIA 195
L +MGN L++ W AL+A
Sbjct: 785 GLIIMGNVQLLSRYPAWHALLA 806
>gi|195014032|ref|XP_001983946.1| GH15286 [Drosophila grimshawi]
gi|193897428|gb|EDV96294.1| GH15286 [Drosophila grimshawi]
Length = 1706
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 106/204 (51%), Gaps = 18/204 (8%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESHR 62
LS QYRMHP I +P+ +FY +LT+++ Y P + PY ++ + ++++
Sbjct: 1496 LSTQYRMHPDICQWPNSYFYDNQLTNADCT------AYLISPFI-PYCVINLSYTQDTND 1548
Query: 63 GGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNSE 122
S S N +EA F L + K M + G+ITPY L + +
Sbjct: 1549 VSSRSISNDEEAHFVAKLLVEMNK---HMPAERYKYGLITPYSNHCYTLSQVIPSTMK-- 1603
Query: 123 EGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGNAG 182
+ TVDA+QGQERD+II+S R GVGF+ + +R+NVA+TR +R L + GN
Sbjct: 1604 ----ITPQTVDAYQGQERDIIILSNART--RGVGFLTNYQRLNVAITRPKRCLVICGNFD 1657
Query: 183 ALTQSDDWAALIADSKARNCYMDM 206
L W L+ D+++RN Y D+
Sbjct: 1658 DLQSVQIWRHLLDDARSRNIYFDV 1681
>gi|149039168|gb|EDL93388.1| rCG45460 [Rattus norvegicus]
Length = 954
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 115/205 (56%), Gaps = 21/205 (10%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQ-----GRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHG 57
L++QYRMHP I FPS + Y RLT++ I E ++ PY+ FDV G
Sbjct: 538 LTIQYRMHPDICLFPSNYVYNKNLKTNRLTET---IRCSSEWPFQ-----PYLVFDVGDG 589
Query: 58 RESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRN 117
E S Y NV E K + + + +++ K + +GIIT YK Q +Q +
Sbjct: 590 SEQRDNDS--YINVQEIKLVMEIIKLIKEKRKDISFR--NIGIITHYKAQKTMIQKDLEK 645
Query: 118 VLNSEEGKDLYINTVDAFQGQERDVIIMSCVRAS--NHGVGFVADIRRMNVALTRARRAL 175
+ + + ++TVDAFQG+++D II++CVRAS +GF+A ++R+NV +TRA+ +L
Sbjct: 646 EFDKKGPAE--VDTVDAFQGRQKDCIIVTCVRASAVQGSIGFLASLQRLNVTITRAKYSL 703
Query: 176 WVMGNAGALTQSDDWAALIADSKAR 200
+++G+ L ++ W LI D++ R
Sbjct: 704 FILGHLRTLMENQHWYELIQDAQKR 728
>gi|407838371|gb|EKG00049.1| regulator of nonsense transcripts 1, putative,nonsense mRNA
reducing factor 1, putative [Trypanosoma cruzi]
Length = 839
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 78/202 (38%), Positives = 111/202 (54%), Gaps = 18/202 (8%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTD--SESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
L VQYRMHP + FPS FY+G L + +E + + DP RP F++ E
Sbjct: 614 LDVQYRMHPALSLFPSDQFYEGTLQNGLTEEQRDASRVFPWPDPT-RPIFFYNTTGSEEL 672
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVT---VGIITPYKLQLKCLQHEFRN 117
GS SY N EA + L + GKV +G+ITPY Q + + +
Sbjct: 673 SANGS-SYLNRAEAALTERIITKLIRD------GKVKPDDIGVITPYGGQCRYVMNYLVR 725
Query: 118 V--LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH--GVGFVADIRRMNVALTRARR 173
L + + +++VDAFQG+E++ II+SCVR SNH G+GFV D RR+NV++TRA+R
Sbjct: 726 CGPLPRTAYERVEVSSVDAFQGREKEFIILSCVR-SNHRQGIGFVVDWRRLNVSITRAKR 784
Query: 174 ALWVMGNAGALTQSDDWAALIA 195
L +MGN L++ W AL+A
Sbjct: 785 GLIIMGNVQLLSRYPAWHALLA 806
>gi|225851051|ref|YP_002731285.1| DNA helicase [Persephonella marina EX-H1]
gi|225645408|gb|ACO03594.1| putative DNA helicase [Persephonella marina EX-H1]
Length = 653
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 124/219 (56%), Gaps = 27/219 (12%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLP-DEVYYKD---PVL--RPYVFFDVI 55
+L +QYRM+ I+ FPS FY G+L ESV + ++ K+ P+ P VF D
Sbjct: 448 MLKIQYRMNDIIKQFPSEEFYDGQLISDESVKDRKLSDITGKEGDAPITDDTPVVFIDT- 506
Query: 56 HGR--ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH 113
G+ E + GS S N +EAK + E L K +G+ +G+ITPYK H
Sbjct: 507 EGKFLEKQKKGSRSKYNPEEAKAVKSIVEKL----KEIGVLTEDIGVITPYK------DH 556
Query: 114 E--FRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTR 170
E + ++ D+ + TVD FQG+E++VI++S VR++ +GF+ D+RR+NVALTR
Sbjct: 557 EDYLKKII-----PDVEVKTVDGFQGREKEVIVISLVRSNPEEEIGFLDDLRRLNVALTR 611
Query: 171 ARRALWVMGNAGALTQSDDWAALIADSKARNCYMDMDSL 209
A+R + ++G++ L+ ++ + LI K + ++ ++ +
Sbjct: 612 AKRKVIIIGDSKTLSSNETYRKLIKFIKEKGTFVTVEEI 650
>gi|403215170|emb|CCK69670.1| hypothetical protein KNAG_0C05720 [Kazachstania naganishii CBS
8797]
Length = 1000
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/219 (35%), Positives = 119/219 (54%), Gaps = 22/219 (10%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRL-----TDSESVINLPDEVYYKDPVLRPYVFFDVIHG 57
L VQYRM+PH+ +FPS FY+G L + +V+N + P+ + F +G
Sbjct: 663 LEVQYRMNPHLSEFPSNMFYEGTLQNGVTIEQRTVLN----STFPWPIHGVPMMFWANYG 718
Query: 58 RESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRN 117
RE G SY N EA C E + L G+ +G+ITPY+ Q + +
Sbjct: 719 REEISGNGTSYLNRIEAMN--C--ERIITKLFRDGVKPEQIGVITPYEGQRAYVLQYMQ- 773
Query: 118 VLNSEEGKDLYIN----TVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRAR 172
+N K LY+ +VDAFQG+E+D II+SCVRA+ +GF+ D RR+NV LTRA+
Sbjct: 774 -MNGAMDKSLYLKVEVASVDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAK 832
Query: 173 RALWVMGNAGALTQSDDWAALIADSKARNCYMD--MDSL 209
L ++GN +L+++ W L+ + + C ++ +D+L
Sbjct: 833 YGLVILGNPRSLSRNLLWNHLLVHFREKGCLVEGALDNL 871
>gi|428177002|gb|EKX45884.1| hypothetical protein GUITHDRAFT_159666 [Guillardia theta CCMP2712]
Length = 1030
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 79/213 (37%), Positives = 112/213 (52%), Gaps = 20/213 (9%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKD---PVLRPYVFFDVIHGRE 59
L VQYRMHP + +FPS FY+G L + V + + D PV + F + G E
Sbjct: 696 LQVQYRMHPILSEFPSNTFYEGTLQNG--VTHAERHAHAIDFPWPVASKPMMFYISTGAE 753
Query: 60 SHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVT---VGIITPYKLQLK-CLQHEF 115
SY N EA +++K + G V +GIITPY+ Q +Q+
Sbjct: 754 ELSASGTSYLNRTEAS-------NVEKIVTRFLKGGVVPEQIGIITPYEGQRAYIVQYMS 806
Query: 116 RN-VLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG--VGFVADIRRMNVALTRAR 172
RN L + +L + +VDAFQG+E+D II+SCVR SN G +GFV + RR+NVALTRAR
Sbjct: 807 RNGSLRKQLYNELEVASVDAFQGREKDFIILSCVR-SNEGKSIGFVNNPRRLNVALTRAR 865
Query: 173 RALWVMGNAGALTQSDDWAALIADSKARNCYMD 205
+ ++GN L + W L+ K C ++
Sbjct: 866 YGVVILGNPKVLAKQPLWNNLLCHFKQHECLVE 898
>gi|297809575|ref|XP_002872671.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297318508|gb|EFH48930.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 815
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 108/194 (55%), Gaps = 14/194 (7%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLR-----PYVFFDVIH 56
LL+VQYRMH I FP+ FY G+++D+E V E Y+ LR + F +V
Sbjct: 621 LLNVQYRMHTSISLFPNMEFYDGKISDAEIV----KESTYQKRFLRGNMFGSFSFINVGL 676
Query: 57 GRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFR 116
G+E G V+ A L L+ + S K++VG+I+PYK Q++ +Q
Sbjct: 677 GKEEFGDGHSPKNMVEVAVVSEILSNLLK--VSSEAKTKMSVGVISPYKAQVRAIQERIG 734
Query: 117 NVLNSEEGKDLYIN--TVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARR 173
+ S + +N +VD FQG E D+II+S VR + +G +GF+++ +R NVALTRAR
Sbjct: 735 DKYTSVSDQLFTLNVRSVDGFQGGEEDIIIISTVRNNGNGHIGFLSNRQRANVALTRARH 794
Query: 174 ALWVMGNAGALTQS 187
LWV+GN L+ S
Sbjct: 795 CLWVIGNERTLSLS 808
>gi|300176328|emb|CBK23639.2| unnamed protein product [Blastocystis hominis]
Length = 321
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 76/198 (38%), Positives = 106/198 (53%), Gaps = 8/198 (4%)
Query: 2 LLSVQYR-MHPHIRDFPSRHFYQGRLTDSESVINL-PDEVYYKDPVLRPYVFFDVIHGRE 59
LL+ QYR HP+I FP++ FY G+L + E+V +Y+ P VF+++
Sbjct: 124 LLNTQYRRCHPNIIAFPNQCFYDGKLMNGENVSGRGYSHQFYESDYFYPVVFYNLCGSNV 183
Query: 60 SHR--GGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRN 117
S + S SY N E +F + LY S ++V I+TPYK Q +
Sbjct: 184 SEKKDAFSKSYSNESEVRFVLNLYNTFLNLYPSYS--SMSVVILTPYKEQKSLFESRIAQ 241
Query: 118 VLNSEEGKDLYINTVDAFQGQERDVIIMSCVRA-SNHGVGFVADIRRMNVALTRARRALW 176
N E + L++ TVDAFQG+E D++ S VR S +GVGFV+DIRRMNV+ TR R L+
Sbjct: 242 HPN-ELVRRLHVFTVDAFQGKEVDLVFYSTVRTGSAYGVGFVSDIRRMNVSFTRPRFGLF 300
Query: 177 VMGNAGALTQSDDWAALI 194
V+GN L S W I
Sbjct: 301 VVGNEAKLRTSTYWNQFI 318
>gi|224009021|ref|XP_002293469.1| hypothetical protein THAPSDRAFT_264090 [Thalassiosira pseudonana
CCMP1335]
gi|220970869|gb|EED89205.1| hypothetical protein THAPSDRAFT_264090 [Thalassiosira pseudonana
CCMP1335]
Length = 349
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 81/215 (37%), Positives = 115/215 (53%), Gaps = 28/215 (13%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL QYRMH I +FPS+ FYQG+L +SV N + +P F+D S
Sbjct: 109 LLREQYRMHQRIAEFPSKEFYQGKLITPDSVKNRSVS-WTSNPCFPTIAFWDTDGKLMSG 167
Query: 62 RGGSVSYQNVDEAKF------GVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEF 115
GG Y N +E +F + YE+L+ T KV++GII+ YK Q+ + F
Sbjct: 168 SGGGFGYSNQEEVEFITRDILSLFTYEYLRNTDV-----KVSIGIISFYKEQVSIILLLF 222
Query: 116 RNV---LNSEEGKD-----LYINTVDAFQGQERDVIIMSCVRASNHG--------VGFVA 159
+ L S D + + TVD FQG E D+II+SCVR+ ++ VGF+
Sbjct: 223 AGIYWTLASVTALDQSRISIKVATVDGFQGSECDIIILSCVRSHSNRGGGNGRNNVGFLN 282
Query: 160 DIRRMNVALTRARRALWVMGNAGALTQSDDWAALI 194
D RR+NVALTRA+ +LW++GN+ L S+ W+ LI
Sbjct: 283 DYRRVNVALTRAKCSLWIVGNSEVLKSSNLWSKLI 317
>gi|321451493|gb|EFX63126.1| hypothetical protein DAPPUDRAFT_335901 [Daphnia pulex]
Length = 1238
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 129/250 (51%), Gaps = 26/250 (10%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
++L QYRM I ++PSR+FY G++ +E + ++ Y DV G E
Sbjct: 914 IMLQTQYRMASSICEWPSRYFYGGKIVTAEGL--------KRNGPCYDYRVLDVTDGIEQ 965
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKS-MGLGKVTVGIITPYKLQLKCLQHEFRNVL 119
S ++N EA V + ++ L S + +GK +VG+IT Y+ Q KC+ + R V
Sbjct: 966 LEEQS--FKNEKEA---VVVANIVKLILNSPLTVGK-SVGVITFYQSQKKCISEKLREVG 1019
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASN----HGVGFVADIRRMNVALTRARRAL 175
DL NTVD+FQG+E D++++SCVRA +GF+ ++RMNVA+TR + L
Sbjct: 1020 CRASKIDL--NTVDSFQGRETDIVVISCVRAQQLKKLDSIGFIGSLQRMNVAMTRPKETL 1077
Query: 176 WVMGNAGALTQSDDWAALIADSKARNCYMDMDSLPKEFSVALAAKAPGYGPLQGKIPHNA 235
+ G+ L +++ W +I ++++RN + S + + P Y P+Q +
Sbjct: 1078 ILCGHFETLQKNETWRDMINNARSRNLAHVVSSNSSSYDICPMIMRPPYSPVQQQ----- 1132
Query: 236 RGLRSAGQRH 245
R + + Q H
Sbjct: 1133 RMVSTFSQEH 1142
>gi|300122269|emb|CBK22842.2| unnamed protein product [Blastocystis hominis]
Length = 586
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 77/214 (35%), Positives = 120/214 (56%), Gaps = 35/214 (16%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY-YKDPVLRPYVF---------- 51
L +Q+RM P I +P+++ YQ +L DS+ V P Y +++ + Y F
Sbjct: 370 LRIQFRMTPSISLWPNQYVYQSQLIDSKRV-RQPSFCYIFQNSSVPSYAFLDVPEVLLFE 428
Query: 52 FDVIHGR-ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKC 110
FD I G HR S+ N+ EA+ V L L L +G ++G+I+PY Q+
Sbjct: 429 FDAIQGICAKHRS---SFHNLREAEIVVDLIHRLFLQLPPSTIG-YSIGVISPYTAQV-- 482
Query: 111 LQHEFRNVLNS--------EEGKDLYINTVDAFQGQERDVIIMSCVRAS------NHGVG 156
H+ RN +NS ++ K + I++VDAFQG E D+II+SCVR++ VG
Sbjct: 483 --HQIRNRMNSVIDCAQFEKDLKLVKISSVDAFQGGESDIIILSCVRSTLKDAQAIKSVG 540
Query: 157 FVADIRRMNVALTRARRALWVMGNAGALTQSDDW 190
F+++++R+NVALTRA++ALW++GNA L + W
Sbjct: 541 FLSNLQRLNVALTRAKQALWIVGNAQHLQINFHW 574
>gi|452820756|gb|EME27794.1| endonuclease [Galdieria sulphuraria]
Length = 712
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 108/197 (54%), Gaps = 10/197 (5%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL QYRMHP I FPS++FY G L + ++ + + +P P F V+ G E
Sbjct: 502 LLRTQYRMHPSIAAFPSQYFYHGLLHSAPCTQSISNYFPWPNPQT-PIAFIPVL-GEEWV 559
Query: 62 RGGSVSYQNVDEAKFGVCLYEHL-------QKTLKSMGLGKVTVGIITPYKLQLKCLQHE 114
SY N E++ + + Q + ++ T+GIITPY Q++ +
Sbjct: 560 TEQGTSYCNPQESQVVIETISQIVENWMTAQNSNHTLQQSFPTIGIITPYAGQMRDIMDR 619
Query: 115 FRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARR 173
++E + + TVD FQG+E+D+II+S VR++ + +GF+ D RR+NVA+TR+R
Sbjct: 620 MDRETSTEWLSYVEVKTVDGFQGREKDIIIISTVRSNPSQSLGFLQDWRRLNVAITRSRS 679
Query: 174 ALWVMGNAGALTQSDDW 190
L V+GNA L+++D W
Sbjct: 680 GLIVIGNANTLSRNDHW 696
>gi|31874607|emb|CAD98045.1| hypothetical protein [Homo sapiens]
Length = 2677
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 114/202 (56%), Gaps = 11/202 (5%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
+ L+VQYRMHP I FPS + Y L + + D +PY+ FDV G S
Sbjct: 2252 LQLTVQYRMHPDICLFPSNYVYNRNLKTNRQTEAI---RCSSDWPFQPYLVFDV--GDGS 2306
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
R + SY NV E K + + + ++ K + +GIIT YK Q +Q + +
Sbjct: 2307 ERRDNDSYINVQEIKLVMEIIKLIKDKRKDVSFR--NIGIITHYKAQKTMIQKDLDKEFD 2364
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASN--HGVGFVADIRRMNVALTRARRALWVM 178
+ + ++TVDAFQG+++D +I++CVRA++ +GF+A ++R+NV +TRA+ +L+++
Sbjct: 2365 RKGPAE--VDTVDAFQGRQKDCVIVTCVRANSIQGSIGFLASLQRLNVTITRAKYSLFIL 2422
Query: 179 GNAGALTQSDDWAALIADSKAR 200
G+ L ++ W LI D++ R
Sbjct: 2423 GHLRTLMENQHWNQLIQDAQKR 2444
>gi|119608404|gb|EAW87998.1| senataxin, isoform CRA_b [Homo sapiens]
gi|119608405|gb|EAW87999.1| senataxin, isoform CRA_b [Homo sapiens]
Length = 1776
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 114/202 (56%), Gaps = 11/202 (5%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
+ L+VQYRMHP I FPS + Y L + + D +PY+ FDV G S
Sbjct: 1351 LQLTVQYRMHPDICLFPSNYVYNRNLKTNRQTEAI---RCSSDWPFQPYLVFDVGDG--S 1405
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
R + SY NV E K + + + ++ K + +GIIT YK Q +Q + +
Sbjct: 1406 ERRDNDSYINVQEIKLVMEIIKLIKDKRKDVSFR--NIGIITHYKAQKTMIQKDLDKEFD 1463
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASN--HGVGFVADIRRMNVALTRARRALWVM 178
+ + ++TVDAFQG+++D +I++CVRA++ +GF+A ++R+NV +TRA+ +L+++
Sbjct: 1464 RKGPAE--VDTVDAFQGRQKDCVIVTCVRANSIQGSIGFLASLQRLNVTITRAKYSLFIL 1521
Query: 179 GNAGALTQSDDWAALIADSKAR 200
G+ L ++ W LI D++ R
Sbjct: 1522 GHLRTLMENQHWNQLIQDAQKR 1543
>gi|47217411|emb|CAG00771.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1186
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/234 (33%), Positives = 118/234 (50%), Gaps = 35/234 (14%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTD--------------SESVINLP----------DE 38
L VQYRMHP + FPS FY+G L + + +V + P D
Sbjct: 716 LQVQYRMHPALSAFPSNIFYEGSLQNGVTAGWISLNALEMNATVKSEPHSQIGCLLAGDR 775
Query: 39 VY----YKDPVLRPYVFFDVIHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLG 94
+ ++ P +FF V G+E SY N EA E + L G
Sbjct: 776 IKKGFDFQWPQPEKPMFFYVTQGQEEIASSGTSYLNRTEAAN----VEKITTRLLKAGAK 831
Query: 95 KVTVGIITPYKLQLKCLQH--EFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASN 152
+GIITPY+ Q L +F L+++ + + I +VDAFQG+E+D II+SCVRA+
Sbjct: 832 PDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQQVEIASVDAFQGREKDFIILSCVRANE 891
Query: 153 H-GVGFVADIRRMNVALTRARRALWVMGNAGALTQSDDWAALIADSKARNCYMD 205
H G+GF+ D RR+NVALTRA+ + ++GN AL++ W L+ + K + ++
Sbjct: 892 HQGIGFLNDPRRLNVALTRAKYGVIIVGNPKALSKQPLWNNLLNNYKEQKVLVE 945
>gi|351713804|gb|EHB16723.1| Regulator of nonsense transcripts 1 [Heterocephalus glaber]
Length = 1068
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 100/176 (56%), Gaps = 8/176 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY-YKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + FPS FY+G L + + + + + ++ P +FF V G+E
Sbjct: 650 LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEI 709
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
SY N EA E + L G +GIITPY+ Q L +F L
Sbjct: 710 ASSGTSYLNRTEAAN----VEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSL 765
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRA 174
+++ +++ I +VDAFQG+E+D II+SCVRA+ H G+GF+ D RR+NVALTRAR A
Sbjct: 766 HTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARPA 821
>gi|187951665|gb|AAI37351.1| Senataxin [Homo sapiens]
Length = 2677
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 114/202 (56%), Gaps = 11/202 (5%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
+ L+VQYRMHP I FPS + Y L + + D +PY+ FDV G S
Sbjct: 2252 LQLTVQYRMHPDICLFPSNYVYNRNLKTNRQTEAI---RCSSDWPFQPYLVFDV--GDGS 2306
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
R + SY NV E K + + + ++ K + +GIIT YK Q +Q + +
Sbjct: 2307 ERRDNDSYINVQEIKLVMEIIKLIKDKRKDVSFR--NIGIITHYKAQKTMIQKDLDKEFD 2364
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASN--HGVGFVADIRRMNVALTRARRALWVM 178
+ + ++TVDAFQG+++D +I++CVRA++ +GF+A ++R+NV +TRA+ +L+++
Sbjct: 2365 RKGPAE--VDTVDAFQGRQKDCVIVTCVRANSIQGSIGFLASLQRLNVTITRAKYSLFIL 2422
Query: 179 GNAGALTQSDDWAALIADSKAR 200
G+ L ++ W LI D++ R
Sbjct: 2423 GHLRTLMENQHWNQLIQDAQKR 2444
>gi|113722133|ref|NP_055861.3| probable helicase senataxin [Homo sapiens]
gi|296453021|sp|Q7Z333.4|SETX_HUMAN RecName: Full=Probable helicase senataxin; AltName: Full=Amyotrophic
lateral sclerosis 4 protein; AltName: Full=SEN1 homolog
Length = 2677
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 114/202 (56%), Gaps = 11/202 (5%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
+ L+VQYRMHP I FPS + Y L + + D +PY+ FDV G S
Sbjct: 2252 LQLTVQYRMHPDICLFPSNYVYNRNLKTNRQTEAI---RCSSDWPFQPYLVFDV--GDGS 2306
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
R + SY NV E K + + + ++ K + +GIIT YK Q +Q + +
Sbjct: 2307 ERRDNDSYINVQEIKLVMEIIKLIKDKRKDVSFR--NIGIITHYKAQKTMIQKDLDKEFD 2364
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASN--HGVGFVADIRRMNVALTRARRALWVM 178
+ + ++TVDAFQG+++D +I++CVRA++ +GF+A ++R+NV +TRA+ +L+++
Sbjct: 2365 RKGPAE--VDTVDAFQGRQKDCVIVTCVRANSIQGSIGFLASLQRLNVTITRAKYSLFIL 2422
Query: 179 GNAGALTQSDDWAALIADSKAR 200
G+ L ++ W LI D++ R
Sbjct: 2423 GHLRTLMENQHWNQLIQDAQKR 2444
>gi|38195410|gb|AAR13367.1| ataxia/oculomotor apraxia protein 2 [Homo sapiens]
Length = 2677
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 114/202 (56%), Gaps = 11/202 (5%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
+ L+VQYRMHP I FPS + Y L + + D +PY+ FDV G S
Sbjct: 2252 LQLTVQYRMHPDICLFPSNYVYNRNLKTNRQTEAI---RCSSDWPFQPYLVFDV--GDGS 2306
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
R + SY NV E K + + + ++ K + +GIIT YK Q +Q + +
Sbjct: 2307 ERRDNDSYINVQEIKLVMEIIKLIKDKRKDVSFR--NIGIITHYKAQKTMIQKDLDKEFD 2364
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASN--HGVGFVADIRRMNVALTRARRALWVM 178
+ + ++TVDAFQG+++D +I++CVRA++ +GF+A ++R+NV +TRA+ +L+++
Sbjct: 2365 RKGPAE--VDTVDAFQGRQKDCVIVTCVRANSIQGSIGFLASLQRLNVTITRAKYSLFIL 2422
Query: 179 GNAGALTQSDDWAALIADSKAR 200
G+ L ++ W LI D++ R
Sbjct: 2423 GHLRTLMENQHWNQLIQDAQKR 2444
>gi|297685576|ref|XP_002820362.1| PREDICTED: probable helicase senataxin [Pongo abelii]
Length = 2678
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 114/202 (56%), Gaps = 11/202 (5%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
+ L+VQYRMHP I FPS + Y L + + D +PY+ FDV G S
Sbjct: 2253 LQLTVQYRMHPDICLFPSNYVYNRNLKTNRQTEAI---RCSSDWPFQPYLVFDV--GDGS 2307
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
R + SY NV E K + + + ++ K + +GIIT YK Q +Q + +
Sbjct: 2308 ERRDNDSYINVQEIKLVMEIIKLIKDKRKDVSFR--NIGIITHYKAQKTMIQKDLDKEFD 2365
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASN--HGVGFVADIRRMNVALTRARRALWVM 178
+ + ++TVDAFQG+++D +I++CVRA++ +GF+A ++R+NV +TRA+ +L+++
Sbjct: 2366 RKGPAE--VDTVDAFQGRQKDCVIVTCVRANSVQGSIGFLASLQRLNVTITRAKYSLFIL 2423
Query: 179 GNAGALTQSDDWAALIADSKAR 200
G+ L ++ W LI D++ R
Sbjct: 2424 GHLRTLMENQHWNQLIQDAQKR 2445
>gi|168273052|dbj|BAG10365.1| senataxin [synthetic construct]
Length = 2677
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 114/202 (56%), Gaps = 11/202 (5%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
+ L+VQYRMHP I FPS + Y L + + D +PY+ FDV G S
Sbjct: 2252 LQLTVQYRMHPDICLFPSNYVYNRNLKTNRQTEAI---RCSSDWPFQPYLVFDV--GDGS 2306
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
R + SY NV E K + + + ++ K + +GIIT YK Q +Q + +
Sbjct: 2307 ERRDNDSYINVQEIKLVMEIIKLIKDKRKDVSFR--NIGIITHYKAQKTMIQKDLDKEFD 2364
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASN--HGVGFVADIRRMNVALTRARRALWVM 178
+ + ++TVDAFQG+++D +I++CVRA++ +GF+A ++R+NV +TRA+ +L+++
Sbjct: 2365 RKGPAE--VDTVDAFQGRQKDCVIVTCVRANSIQGSIGFLASLQRLNVTITRAKYSLFIL 2422
Query: 179 GNAGALTQSDDWAALIADSKAR 200
G+ L ++ W LI D++ R
Sbjct: 2423 GHLRTLMENQHWNQLIQDAQKR 2444
>gi|159114110|ref|XP_001707280.1| Regulator of nonsense transcripts 1-like protein [Giardia lamblia
ATCC 50803]
gi|112735207|gb|ABI20695.1| UPF1 [Giardia intestinalis]
gi|157435384|gb|EDO79606.1| Regulator of nonsense transcripts 1-like protein [Giardia lamblia
ATCC 50803]
Length = 1304
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 110/199 (55%), Gaps = 16/199 (8%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSES-----VINLPDEV-YYKDPVLRPYVFFDVIH 56
L+VQYRMHP + FPS FY G L + + +I P + + P+ FF +
Sbjct: 1084 LTVQYRMHPALSAFPSNTFYNGMLQNGVTQADRQLIPKPLSIDSFPWPIPSTPSFFWHVQ 1143
Query: 57 GRESHR-GGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEF 115
G +H G S +N E +C+ + + LK L + +GI+TPY Q ++ +
Sbjct: 1144 G--THEIGHGTSLRNDTEI---LCVEAIVDQLLKCYELKQSDIGIVTPYDYQKCQIEMQL 1198
Query: 116 RNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRAL 175
++ SE +++N+VDAFQG E++VII S VR+ + +GF+ D RR+NV LTR R AL
Sbjct: 1199 KDAGYSE----VFVNSVDAFQGHEKEVIIFSTVRSVDKHIGFLKDQRRLNVGLTRCRCAL 1254
Query: 176 WVMGNAGALTQSDDWAALI 194
++GNA AL W +LI
Sbjct: 1255 IIVGNATALAIDSTWRSLI 1273
>gi|34327966|dbj|BAA31600.2| KIAA0625 protein [Homo sapiens]
Length = 2663
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 114/202 (56%), Gaps = 11/202 (5%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
+ L+VQYRMHP I FPS + Y L + + D +PY+ FDV G S
Sbjct: 2238 LQLTVQYRMHPDICLFPSNYVYNRNLKTNRQTEAI---RCSSDWPFQPYLVFDV--GDGS 2292
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
R + SY NV E K + + + ++ K + +GIIT YK Q +Q + +
Sbjct: 2293 ERRDNDSYINVQEIKLVMEIIKLIKDKRKDVSFR--NIGIITHYKAQKTMIQKDLDKEFD 2350
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASN--HGVGFVADIRRMNVALTRARRALWVM 178
+ + ++TVDAFQG+++D +I++CVRA++ +GF+A ++R+NV +TRA+ +L+++
Sbjct: 2351 RKGPAE--VDTVDAFQGRQKDCVIVTCVRANSIQGSIGFLASLQRLNVTITRAKYSLFIL 2408
Query: 179 GNAGALTQSDDWAALIADSKAR 200
G+ L ++ W LI D++ R
Sbjct: 2409 GHLRTLMENQHWNQLIQDAQKR 2430
>gi|358414658|ref|XP_001787696.2| PREDICTED: probable helicase senataxin [Bos taurus]
Length = 2592
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 113/202 (55%), Gaps = 11/202 (5%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
+ L++QYRMHP I FPS + Y G L + D +PY+ FDV G E
Sbjct: 2172 LQLTIQYRMHPDICLFPSSYIYDGILRTNRGT---ETSRCSSDWPFQPYLVFDVGDGLE- 2227
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
R + SY NV E K + L + ++ + + +GIIT YK Q +Q + +
Sbjct: 2228 -RRDNDSYVNVQEIKLVMELIKLIKDKRRDVTFR--NIGIITHYKAQKTMIQKDLDKEFD 2284
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRA--SNHGVGFVADIRRMNVALTRARRALWVM 178
+ + ++TVDAFQG+++D +I++CVRA + +GF+A ++R+NV +TRA+ +L+++
Sbjct: 2285 RKGAAE--VDTVDAFQGRQKDCVIVTCVRANATQGSIGFLASLQRLNVTITRAKYSLFIL 2342
Query: 179 GNAGALTQSDDWAALIADSKAR 200
G+ L ++ W LI D++ R
Sbjct: 2343 GHLRTLVENRHWYHLIQDAQKR 2364
>gi|308161426|gb|EFO63875.1| Regulator of nonsense transcripts 1-like protein [Giardia lamblia
P15]
Length = 1303
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/199 (37%), Positives = 108/199 (54%), Gaps = 16/199 (8%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRL------TDSESVINLPDEVYYKDPVLRPYVFFDVIH 56
L+VQYRMHP + FPS FY G L D + V + P+ FF +
Sbjct: 1083 LTVQYRMHPALSAFPSNTFYNGMLQNGVTQADRQLVPKPLSTESFPWPMPSTPSFFWHVQ 1142
Query: 57 GRESHR-GGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEF 115
G +H G S +N E +C+ + + LK L + +GI+TPY Q ++ +
Sbjct: 1143 G--THEIGHGTSLRNDTEI---LCVEAIVDQLLKCYELKQGDIGIVTPYDYQKCQIEMQL 1197
Query: 116 RNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRAL 175
++ SE +++N+VDAFQG E++VII S VR+ + +GF+ D RR+NV LTR R AL
Sbjct: 1198 KDAGYSE----VFVNSVDAFQGHEKEVIIFSTVRSVDKHIGFLKDQRRLNVGLTRCRCAL 1253
Query: 176 WVMGNAGALTQSDDWAALI 194
++GNA AL D W +LI
Sbjct: 1254 IIVGNATALAIDDTWRSLI 1272
>gi|359070644|ref|XP_002691695.2| PREDICTED: LOW QUALITY PROTEIN: probable helicase senataxin [Bos
taurus]
Length = 2663
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 113/202 (55%), Gaps = 11/202 (5%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
+ L++QYRMHP I FPS + Y G L + D +PY+ FDV G E
Sbjct: 2243 LQLTIQYRMHPDICLFPSSYIYDGILRTNRGT---ETSRCSSDWPFQPYLVFDVGDGLE- 2298
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
R + SY NV E K + L + ++ + + +GIIT YK Q +Q + +
Sbjct: 2299 -RRDNDSYVNVQEIKLVMELIKLIKDKRRDVTFR--NIGIITHYKAQKTMIQKDLDKEFD 2355
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRA--SNHGVGFVADIRRMNVALTRARRALWVM 178
+ + ++TVDAFQG+++D +I++CVRA + +GF+A ++R+NV +TRA+ +L+++
Sbjct: 2356 RKGAAE--VDTVDAFQGRQKDCVIVTCVRANATQGSIGFLASLQRLNVTITRAKYSLFIL 2413
Query: 179 GNAGALTQSDDWAALIADSKAR 200
G+ L ++ W LI D++ R
Sbjct: 2414 GHLRTLVENRHWYHLIQDAQKR 2435
>gi|291411430|ref|XP_002721992.1| PREDICTED: Upf1-like [Oryctolagus cuniculus]
Length = 2613
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 115/207 (55%), Gaps = 21/207 (10%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQ-----GRLTDSESVINLPDEVYYKDPVLRPYVFFDVI 55
+ L+VQYRMHP I FPS + Y RLT++ + D +PY+ FDV
Sbjct: 2206 LQLTVQYRMHPDICLFPSNYVYNRSLRTNRLTETNRCSS--------DWPFQPYLVFDVG 2257
Query: 56 HGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEF 115
G S R + SY N+ E K + + + ++ + + VGIIT YK Q +Q +
Sbjct: 2258 DG--SERRDNDSYVNIQEIKLVMEIIKLIKDKRRDITFR--NVGIITHYKAQKTMIQKDL 2313
Query: 116 RNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRAS--NHGVGFVADIRRMNVALTRARR 173
+ + ++TVDAFQG+++D +I++CVRA+ +GF+A ++RMNV +TRA+
Sbjct: 2314 DKEFDRRGPAE--VDTVDAFQGRQKDCVIVTCVRANALQGSIGFLASLQRMNVTITRAKY 2371
Query: 174 ALWVMGNAGALTQSDDWAALIADSKAR 200
+L+++G+ L ++ W LI D++ R
Sbjct: 2372 SLFILGHLRTLMENQHWNQLIQDAQKR 2398
>gi|335281152|ref|XP_003353743.1| PREDICTED: probable helicase senataxin [Sus scrofa]
Length = 2661
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 116/203 (57%), Gaps = 13/203 (6%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRL-TDSESVINLPDEVYYKDPVLRPYVFFDVIHGRE 59
+ L+VQYRMHP I FPS + Y L T+S + + D +PY+ FDV G
Sbjct: 2246 LQLTVQYRMHPDICLFPSNYIYNRNLKTNSLTEASR----CSSDWPFQPYLVFDVGDG-- 2299
Query: 60 SHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVL 119
S R + SY NV E K + + + ++ + + +GIIT YK Q +Q +
Sbjct: 2300 SERRDNDSYVNVQEIKLVMEIIKLIKDKRRDVTFR--NIGIITHYKAQKTLIQKDLDKEF 2357
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRA--SNHGVGFVADIRRMNVALTRARRALWV 177
+ + + ++TVD FQG+++D +I++CVRA S +GF+A ++R+NV +TRA+ +L++
Sbjct: 2358 DRKGPAE--VDTVDGFQGRQKDCVIVTCVRAKTSQGSIGFLASLQRLNVTITRAKYSLFI 2415
Query: 178 MGNAGALTQSDDWAALIADSKAR 200
+G+ L ++D W LI D++ R
Sbjct: 2416 LGHLRTLRENDHWNQLIEDAQKR 2438
>gi|194225958|ref|XP_001498724.2| PREDICTED: probable helicase senataxin [Equus caballus]
Length = 2680
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 116/207 (56%), Gaps = 21/207 (10%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQ-----GRLTDSESVINLPDEVYYKDPVLRPYVFFDVI 55
+ L+VQYRMHP I FPS + Y RLT++ + D +PY+ FDV
Sbjct: 2260 LQLTVQYRMHPDICLFPSNYVYNKSLKTNRLTETSRCSS--------DWPFQPYLVFDV- 2310
Query: 56 HGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEF 115
G S R + SY NV E K + + + ++ + + +GIIT YK Q +Q +
Sbjct: 2311 -GDGSERRDNDSYVNVQEIKLVMEIIKLIKDKRRDVTFR--NIGIITHYKAQKTMIQKDL 2367
Query: 116 RNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRA--SNHGVGFVADIRRMNVALTRARR 173
+ + + ++TVDAFQG+++D +I++CVRA + +GF+A ++R+NV +TRA+
Sbjct: 2368 DKEFDGKGPAE--VDTVDAFQGRQKDCVIVTCVRANATQGSIGFLASLQRLNVTITRAKY 2425
Query: 174 ALWVMGNAGALTQSDDWAALIADSKAR 200
+L+++G+ L ++ W LI D++ R
Sbjct: 2426 SLFILGHLRTLMDNEHWNELIQDAQKR 2452
>gi|196001321|ref|XP_002110528.1| hypothetical protein TRIADDRAFT_54641 [Trichoplax adhaerens]
gi|190586479|gb|EDV26532.1| hypothetical protein TRIADDRAFT_54641 [Trichoplax adhaerens]
Length = 1070
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 120/234 (51%), Gaps = 36/234 (15%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESV------------------------INLPDE 38
L+VQYRMHP + +FPS HFY+G L + ++ + L D
Sbjct: 657 LTVQYRMHPDLSEFPSFHFYEGALQNGVAIDRKGLPTITASGNNSKEVQQDQANVTLSDS 716
Query: 39 VYYKDPVL----RPYVFFDVIHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLG 94
+ ++ RP F++ E GS SY N EA+ E + G+
Sbjct: 717 ESSPESLIVDRNRPMFFWNTQGTEEPGATGS-SYLNRSEAES----VEKIITCFLRTGIK 771
Query: 95 KVTVGIITPYKLQLKCL--QHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASN 152
+G+ITPY+ Q + + R + + + + + +VDAFQG+E+D II+SCVR++
Sbjct: 772 PEQIGVITPYESQRAYVVTLMKTRGSMQDDLYQKVEVASVDAFQGREKDYIILSCVRSNE 831
Query: 153 H-GVGFVADIRRMNVALTRARRALWVMGNAGALTQSDDWAALIADSKARNCYMD 205
+ G+GF+ D RR+NV++TRA+ L ++GNA L + W LI K ++C+M+
Sbjct: 832 YQGIGFLNDPRRLNVSITRAKNGLIIIGNARVLAKHPLWYNLIDYMKDKHCFME 885
>gi|401624314|gb|EJS42376.1| nam7p [Saccharomyces arboricola H-6]
Length = 971
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 119/216 (55%), Gaps = 16/216 (7%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVI--NLPDEVYYKDPVLRPYVFFDVIHGRES 60
L VQYRM+P++ +FPS FY+G L + ++ +P+ + P+ + F +GRE
Sbjct: 634 LEVQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTIPNS-KFPWPIRGIPMMFWANYGREE 692
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
S+ N EA C E + L G+ +G+ITPY+ Q + + +N
Sbjct: 693 ISANGTSFLNRIEAMN--C--ERIITKLFRDGVKPEQIGVITPYEGQRAYILQYMQ--MN 746
Query: 121 SEEGKDLYIN----TVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRAL 175
KDLYI +VDAFQG+E+D II+SCVRA+ +GF+ D RR+NV LTRA+ L
Sbjct: 747 GSLDKDLYIKVEVASVDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAKYGL 806
Query: 176 WVMGNAGALTQSDDWAALIADSKARNCYMD--MDSL 209
++GN +L ++ W L+ + + C ++ +D+L
Sbjct: 807 VILGNPRSLARNTLWNHLLIHFREKGCLVEGTLDNL 842
>gi|367008616|ref|XP_003678809.1| hypothetical protein TDEL_0A02660 [Torulaspora delbrueckii]
gi|359746466|emb|CCE89598.1| hypothetical protein TDEL_0A02660 [Torulaspora delbrueckii]
Length = 908
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 114/209 (54%), Gaps = 12/209 (5%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLRPYVFFDVIHGRESH 61
L VQYRM+P++ DFPS FY+G L + ++ + P+ + F +GRE
Sbjct: 599 LEVQYRMNPYLSDFPSNVFYEGSLQNGVTIEQRTVTNSTFPWPIHGVPMMFWANYGREEI 658
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
SY N EA C E + L G+ +G+ITPY+ Q + + +N
Sbjct: 659 SANGTSYLNRIEAMN--C--ERIITRLFKDGVKPEQIGVITPYEGQRAFILQYMQ--MNG 712
Query: 122 EEGKDLYIN----TVDAFQGQERDVIIMSCVRASNHGV-GFVADIRRMNVALTRARRALW 176
+DLY++ +VDAFQG+E+D II+SCVRA+ + GF++D RR+NV LTRA+ L
Sbjct: 713 SLDRDLYLSVEVASVDAFQGREKDYIILSCVRANEQQIIGFLSDPRRLNVGLTRAKYGLV 772
Query: 177 VMGNAGALTQSDDWAALIADSKARNCYMD 205
++GN AL+ + W L+ + + C ++
Sbjct: 773 ILGNPRALSTNALWNNLLIHFREKGCLVE 801
>gi|341881801|gb|EGT37736.1| hypothetical protein CAEBREN_04117 [Caenorhabditis brenneri]
Length = 1054
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/207 (35%), Positives = 113/207 (54%), Gaps = 16/207 (7%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKD-----PVLRPYVFFDVIHG 57
L VQYRMHP + +FPS FY G L + + ++ Y K P FF G
Sbjct: 666 LQVQYRMHPVLSEFPSNAFYDGSLQNGVT----ENDRYMKGVDWHWPTHNKPAFFWHCSG 721
Query: 58 RESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEF-- 115
E S+ N EA E L L G+ + +G+ITPY+ Q + +
Sbjct: 722 AEELSASGTSFLNRTEAAN----VEKLVSKLIKGGVQPLQIGVITPYEGQRSFIVNYMHT 777
Query: 116 RNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRA 174
+ LNS+ + + I +VDAFQG+E+D II++CVR+++ G+GF++D RR+NVA+TRA+
Sbjct: 778 QGTLNSKLYESVEIASVDAFQGREKDYIIVTCVRSNDALGIGFLSDPRRLNVAITRAKYG 837
Query: 175 LWVMGNAGALTQSDDWAALIADSKARN 201
+ V+GNA L++ + W LI K ++
Sbjct: 838 MVVVGNAKVLSRHELWYELINHFKKKD 864
>gi|255082736|ref|XP_002504354.1| predicted protein [Micromonas sp. RCC299]
gi|226519622|gb|ACO65612.1| predicted protein [Micromonas sp. RCC299]
Length = 1248
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 114/216 (52%), Gaps = 31/216 (14%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDP-------------VLR 47
+ L+VQ+RMH I +P+++FY+G L E+ + P E + L+
Sbjct: 844 VALTVQHRMHAEIAKWPAKYFYRGEL---ENAADSPTESPFNQCGGDGAVCLDGHLFRLK 900
Query: 48 PYVFFDVIHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQ 107
PY F D HG E+ S S N EAK + + +K + + +V +ITPY+ Q
Sbjct: 901 PYAFLD-FHGEEAVGAQSKSIMNESEAKIVAAVVKAARKWARV----EASVAVITPYREQ 955
Query: 108 LKCLQHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVA 167
+ + +NV +S + + TVD FQGQE D++I+SC R +GF+ D RR+NVA
Sbjct: 956 RELI---IKNVDDS----SVRVGTVDGFQGQEADIVIISCTRTKQ--LGFLEDERRLNVA 1006
Query: 168 LTRARRALWVMGNAGALTQS-DDWAALIADSKARNC 202
LTRAR +L ++G+A + + W L+ D+ R C
Sbjct: 1007 LTRARESLLIVGSADFMRRKRGPWKDLVDDAHERGC 1042
>gi|374635637|ref|ZP_09707232.1| DNA helicase [Methanotorris formicicus Mc-S-70]
gi|373561703|gb|EHP87932.1| DNA helicase [Methanotorris formicicus Mc-S-70]
Length = 637
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/206 (36%), Positives = 111/206 (53%), Gaps = 29/206 (14%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRL-----TDSESVINLPD-EVYYKDPVL---RPYVFF 52
+L +QYRM+ I FP++ FY +L +S ++ +L D EV +D + P VF
Sbjct: 445 ILEIQYRMNEKIMKFPNKAFYDNKLKAHKSVESHTIFDLIDVEVDEEDKFIINEEPIVFI 504
Query: 53 DVIHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQ 112
DV G+E S SY N +EAK L +K + V +ITPY Q+K +
Sbjct: 505 DV-KGKEKRDKDSTSYYNEEEAKVVAKLVGIFKKY-------NIPVSVITPYDAQVKLIS 556
Query: 113 HEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRAR 172
N+ + E +NTVD FQG+E +VII+S VR G F+ D+RR+NVA+TRA+
Sbjct: 557 ----NLCDGE------VNTVDGFQGKEDEVIIISFVRTKKFG--FLEDLRRLNVAITRAK 604
Query: 173 RALWVMGNAGALTQSDDWAALIADSK 198
R L ++G L+Q + + LI +K
Sbjct: 605 RKLIIVGCKELLSQDETYRELIKSAK 630
>gi|323332050|gb|EGA73461.1| Nam7p [Saccharomyces cerevisiae AWRI796]
Length = 930
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 119/216 (55%), Gaps = 16/216 (7%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVI--NLPDEVYYKDPVLRPYVFFDVIHGRES 60
L VQYRM+P++ +FPS FY+G L + ++ +P+ + P+ + F +GRE
Sbjct: 634 LEVQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTVPNS-KFPWPIRGIPMMFWANYGREE 692
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
S+ N EA C E + L G+ +G+ITPY+ Q + + +N
Sbjct: 693 ISANGTSFLNRIEAMN--C--ERIITKLFRDGVKPEQIGVITPYEGQRAYILQYMQ--MN 746
Query: 121 SEEGKDLYIN----TVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRAL 175
KDLYI +VDAFQG+E+D II+SCVRA+ +GF+ D RR+NV LTRA+ L
Sbjct: 747 GSLDKDLYIKVEVASVDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAKYGL 806
Query: 176 WVMGNAGALTQSDDWAALIADSKARNCYMD--MDSL 209
++GN +L ++ W L+ + + C ++ +D+L
Sbjct: 807 VILGNPRSLARNTLWNHLLIHFREKGCLVEGTLDNL 842
>gi|323336281|gb|EGA77552.1| Nam7p [Saccharomyces cerevisiae Vin13]
Length = 930
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 119/216 (55%), Gaps = 16/216 (7%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVI--NLPDEVYYKDPVLRPYVFFDVIHGRES 60
L VQYRM+P++ +FPS FY+G L + ++ +P+ + P+ + F +GRE
Sbjct: 634 LEVQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTVPNS-KFPWPIRGIPMMFWANYGREE 692
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
S+ N EA C E + L G+ +G+ITPY+ Q + + +N
Sbjct: 693 ISANGTSFLNRIEAMN--C--ERIITKLFRDGVKPEQIGVITPYEGQRAYILQYMQ--MN 746
Query: 121 SEEGKDLYIN----TVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRAL 175
KDLYI +VDAFQG+E+D II+SCVRA+ +GF+ D RR+NV LTRA+ L
Sbjct: 747 GSLDKDLYIKVEVASVDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAKYGL 806
Query: 176 WVMGNAGALTQSDDWAALIADSKARNCYMD--MDSL 209
++GN +L ++ W L+ + + C ++ +D+L
Sbjct: 807 VILGNPRSLARNTLWNHLLIHFREKGCLVEGTLDNL 842
>gi|50551471|ref|XP_503209.1| YALI0D23881p [Yarrowia lipolytica]
gi|49649077|emb|CAG81409.1| YALI0D23881p [Yarrowia lipolytica CLIB122]
Length = 964
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 115/210 (54%), Gaps = 14/210 (6%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRL----TDSESVINLPDEVYYKDPVLRPYVFFDVIHGR 58
L VQYRMHP + +FPS FY+G L T + V+ D + + P +F+ + G+
Sbjct: 650 LMVQYRMHPSLSEFPSNMFYEGSLQNGVTTASRVLKYVDFPWPQPQ--HPMLFWSNL-GQ 706
Query: 59 ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV 118
E S+ N EA C E + L G+ +G++TPY+ Q + +
Sbjct: 707 EEISASGTSFLNRTEA--ANC--ERIVTRLFKCGVAPDQIGVVTPYEGQRAYVTQYMVSS 762
Query: 119 LNSEEG--KDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRAL 175
+ +E K + + +VDAFQG+E+D II++CVR+S G +GF++D RR+NVALTRA+ L
Sbjct: 763 GSVDEAMYKGVEVQSVDAFQGREKDFIILTCVRSSKTGGIGFLSDPRRLNVALTRAKYGL 822
Query: 176 WVMGNAGALTQSDDWAALIADSKARNCYMD 205
++GN L + W LI +++ C ++
Sbjct: 823 IILGNPHVLARHPLWLHLITYFRSKRCLVE 852
>gi|5732068|gb|AAD48967.1|AF147263_9 contains similarity to nonsense-mediated mRNA decay trans-acting
factors [Arabidopsis thaliana]
gi|7267314|emb|CAB81096.1| AT4g05540 [Arabidopsis thaliana]
Length = 660
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 108/194 (55%), Gaps = 14/194 (7%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLR-----PYVFFDVIH 56
LL+VQYRMHP I FP+ FY G+++D+E V E Y+ L+ + F +V
Sbjct: 470 LLNVQYRMHPSISLFPNMEFYGGKISDAEIV----KESTYQKRFLQGNMFGSFSFINVGL 525
Query: 57 GRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFR 116
G+E G V+ A L L+ + S K++VG+I+PYK Q+ +Q
Sbjct: 526 GKEEFGDGHSPKNMVEIAVVSEILTNLLK--VSSETKTKMSVGVISPYKAQVSAIQERIG 583
Query: 117 NVLNSEEGKDLYIN--TVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARR 173
+ S +N +VD FQG E D+II+S VR++ +G +GF+++ +R NVALTRAR
Sbjct: 584 DKYTSVSDNLFTLNVRSVDGFQGGEEDIIIISTVRSNCNGNIGFLSNRQRANVALTRARH 643
Query: 174 ALWVMGNAGALTQS 187
LWV+GN L+ S
Sbjct: 644 CLWVIGNERTLSLS 657
>gi|365763806|gb|EHN05332.1| Nam7p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 971
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 119/216 (55%), Gaps = 16/216 (7%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVI--NLPDEVYYKDPVLRPYVFFDVIHGRES 60
L VQYRM+P++ +FPS FY+G L + ++ +P+ + P+ + F +GRE
Sbjct: 634 LEVQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTVPNS-KFPWPIRGIPMMFWANYGREE 692
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
S+ N EA C E + L G+ +G+ITPY+ Q + + +N
Sbjct: 693 ISANGTSFLNRIEAMN--C--ERIITKLFRDGVKPEQIGVITPYEGQRAYILQYMQ--MN 746
Query: 121 SEEGKDLYIN----TVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRAL 175
KDLYI +VDAFQG+E+D II+SCVRA+ +GF+ D RR+NV LTRA+ L
Sbjct: 747 GSLDKDLYIKVEVASVDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAKYGL 806
Query: 176 WVMGNAGALTQSDDWAALIADSKARNCYMD--MDSL 209
++GN +L ++ W L+ + + C ++ +D+L
Sbjct: 807 VILGNPRSLARNTLWNHLLIHFREKGCLVEGTLDNL 842
>gi|256273504|gb|EEU08438.1| Nam7p [Saccharomyces cerevisiae JAY291]
Length = 971
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 119/216 (55%), Gaps = 16/216 (7%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVI--NLPDEVYYKDPVLRPYVFFDVIHGRES 60
L VQYRM+P++ +FPS FY+G L + ++ +P+ + P+ + F +GRE
Sbjct: 634 LEVQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTVPNS-KFPWPIRGIPMMFWANYGREE 692
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
S+ N EA C E + L G+ +G+ITPY+ Q + + +N
Sbjct: 693 ISANGTSFLNRIEAMN--C--ERIITKLFRDGVKPEQIGVITPYEGQRAYILQYMQ--MN 746
Query: 121 SEEGKDLYIN----TVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRAL 175
KDLYI +VDAFQG+E+D II+SCVRA+ +GF+ D RR+NV LTRA+ L
Sbjct: 747 GSLDKDLYIKVEVASVDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAKYGL 806
Query: 176 WVMGNAGALTQSDDWAALIADSKARNCYMD--MDSL 209
++GN +L ++ W L+ + + C ++ +D+L
Sbjct: 807 VILGNPRSLARNTLWNHLLIHFREKGCLVEGTLDNL 842
>gi|151946238|gb|EDN64469.1| nuclear accommodation of mitochondria [Saccharomyces cerevisiae
YJM789]
Length = 971
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 119/216 (55%), Gaps = 16/216 (7%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVI--NLPDEVYYKDPVLRPYVFFDVIHGRES 60
L VQYRM+P++ +FPS FY+G L + ++ +P+ + P+ + F +GRE
Sbjct: 634 LEVQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTVPNS-KFPWPIRGIPMMFWANYGREE 692
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
S+ N EA C E + L G+ +G+ITPY+ Q + + +N
Sbjct: 693 ISANGTSFLNRIEAMN--C--ERIITKLFRDGVKPEQIGVITPYEGQRAYILQYMQ--MN 746
Query: 121 SEEGKDLYIN----TVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRAL 175
KDLYI +VDAFQG+E+D II+SCVRA+ +GF+ D RR+NV LTRA+ L
Sbjct: 747 GSLDKDLYIKVEVASVDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAKYGL 806
Query: 176 WVMGNAGALTQSDDWAALIADSKARNCYMD--MDSL 209
++GN +L ++ W L+ + + C ++ +D+L
Sbjct: 807 VILGNPRSLARNTLWNHLLIHFREKGCLVEGTLDNL 842
>gi|405973005|gb|EKC37745.1| Helicase sen1 [Crassostrea gigas]
Length = 294
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/221 (33%), Positives = 112/221 (50%), Gaps = 49/221 (22%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
++L QYRMHP I +PS++ YQG+L SV N P EV + + V + R
Sbjct: 114 LMLDTQYRMHPDIAYWPSQYIYQGKLKTDRSVNN-PTEVEF----IVQLVLVILRSTRPQ 168
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
H VGII PYK Q +H L
Sbjct: 169 H------------------------------------VGIIAPYKSQ----KHLLSTSLA 188
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNH--GVGFVADIRRMNVALTRARRALWVM 178
+ +++ I+TVD FQGQE++VI+ SCVRA N +GF+AD +RMNVALTRA+ AL+++
Sbjct: 189 KKGVRNIEISTVDGFQGQEKEVIVFSCVRAQNQSRSIGFMADKKRMNVALTRAKSALYIV 248
Query: 179 GNAGALTQSD-DWAALIADSKARNCYMDMDSLPKEFSVALA 218
+ +L +++ DW +I D++ RN + + +EF A+
Sbjct: 249 AHMDSLKEANADWRNMIEDAERRNMIYTVAN-TREFQSAVT 288
>gi|349580361|dbj|GAA25521.1| K7_Nam7p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 971
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 119/216 (55%), Gaps = 16/216 (7%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVI--NLPDEVYYKDPVLRPYVFFDVIHGRES 60
L VQYRM+P++ +FPS FY+G L + ++ +P+ + P+ + F +GRE
Sbjct: 634 LEVQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTVPNS-KFPWPIRGIPMMFWANYGREE 692
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
S+ N EA C E + L G+ +G+ITPY+ Q + + +N
Sbjct: 693 ISANGTSFLNRIEAMN--C--ERIITKLFRDGVKPEQIGVITPYEGQRAYILQYMQ--MN 746
Query: 121 SEEGKDLYIN----TVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRAL 175
KDLYI +VDAFQG+E+D II+SCVRA+ +GF+ D RR+NV LTRA+ L
Sbjct: 747 GSLDKDLYIKVEVASVDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAKYGL 806
Query: 176 WVMGNAGALTQSDDWAALIADSKARNCYMD--MDSL 209
++GN +L ++ W L+ + + C ++ +D+L
Sbjct: 807 VILGNPRSLARNTLWNHLLIHFREKGCLVEGTLDNL 842
>gi|156836785|ref|XP_001642437.1| hypothetical protein Kpol_337p1 [Vanderwaltozyma polyspora DSM
70294]
gi|156112963|gb|EDO14579.1| hypothetical protein Kpol_337p1 [Vanderwaltozyma polyspora DSM
70294]
Length = 999
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 116/210 (55%), Gaps = 14/210 (6%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVI--NLPDEVYYKDPVLRPYVFFDVIHGRES 60
L VQYRM+P + +FPS FY+G L + ++ +P + P+ + F +GRE
Sbjct: 651 LEVQYRMNPFLSEFPSNMFYEGSLQNGVTIEQRTIPGSTF-PWPIHEVPMMFWANYGREE 709
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
S+ N EA C E + L G+ +G+ITPY+ Q + + +N
Sbjct: 710 ISANGTSFLNRIEAMN--C--ERIITRLFKDGVKPHQIGVITPYEGQRAYILQYMQ--MN 763
Query: 121 SEEGKDLYIN----TVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRAL 175
K+LY+N +VDAFQG+E+D II+SCVRA+ +GF++D RR+NV LTRA+ L
Sbjct: 764 GSLDKELYVNVEVASVDAFQGREKDYIILSCVRANEQQAIGFLSDPRRLNVGLTRAKYGL 823
Query: 176 WVMGNAGALTQSDDWAALIADSKARNCYMD 205
++GN +L+++ W L+ + + C ++
Sbjct: 824 VILGNPRSLSRNVLWNHLLIHFREKGCLVE 853
>gi|42566323|ref|NP_567301.2| DNA helicase domain-containing protein [Arabidopsis thaliana]
gi|332657133|gb|AEE82533.1| DNA helicase domain-containing protein [Arabidopsis thaliana]
Length = 689
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 108/194 (55%), Gaps = 14/194 (7%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLR-----PYVFFDVIH 56
LL+VQYRMHP I FP+ FY G+++D+E V E Y+ L+ + F +V
Sbjct: 499 LLNVQYRMHPSISLFPNMEFYGGKISDAEIV----KESTYQKRFLQGNMFGSFSFINVGL 554
Query: 57 GRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFR 116
G+E G V+ A L L+ + S K++VG+I+PYK Q+ +Q
Sbjct: 555 GKEEFGDGHSPKNMVEIAVVSEILTNLLK--VSSETKTKMSVGVISPYKAQVSAIQERIG 612
Query: 117 NVLNSEEGKDLYIN--TVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARR 173
+ S +N +VD FQG E D+II+S VR++ +G +GF+++ +R NVALTRAR
Sbjct: 613 DKYTSVSDNLFTLNVRSVDGFQGGEEDIIIISTVRSNCNGNIGFLSNRQRANVALTRARH 672
Query: 174 ALWVMGNAGALTQS 187
LWV+GN L+ S
Sbjct: 673 CLWVIGNERTLSLS 686
>gi|323307726|gb|EGA60989.1| Nam7p [Saccharomyces cerevisiae FostersO]
Length = 971
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 119/216 (55%), Gaps = 16/216 (7%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVI--NLPDEVYYKDPVLRPYVFFDVIHGRES 60
L VQYRM+P++ +FPS FY+G L + ++ +P+ + P+ + F +GRE
Sbjct: 634 LEVQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTVPNS-KFPWPIRGIPMMFWANYGREE 692
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
S+ N EA C E + L G+ +G+ITPY+ Q + + +N
Sbjct: 693 ISANGTSFLNRIEAMN--C--ERIITKLFRDGVKPEQIGVITPYEGQRAYILQYMQ--MN 746
Query: 121 SEEGKDLYIN----TVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRAL 175
KDLYI +VDAFQG+E+D II+SCVRA+ +GF+ D RR+NV LTRA+ L
Sbjct: 747 GSLDKDLYIKVEVASVDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAKYGL 806
Query: 176 WVMGNAGALTQSDDWAALIADSKARNCYMD--MDSL 209
++GN +L ++ W L+ + + C ++ +D+L
Sbjct: 807 VILGNPRSLARNTLWNHLLIHFREKGCLVEGTLDNL 842
>gi|323347166|gb|EGA81441.1| Nam7p [Saccharomyces cerevisiae Lalvin QA23]
Length = 971
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 119/216 (55%), Gaps = 16/216 (7%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVI--NLPDEVYYKDPVLRPYVFFDVIHGRES 60
L VQYRM+P++ +FPS FY+G L + ++ +P+ + P+ + F +GRE
Sbjct: 634 LEVQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTVPNS-KFPWPIRGIPMMFWANYGREE 692
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
S+ N EA C E + L G+ +G+ITPY+ Q + + +N
Sbjct: 693 ISANGTSFLNRIEAMN--C--ERIITKLFRDGVKPEQIGVITPYEGQRAYILQYMQ--MN 746
Query: 121 SEEGKDLYIN----TVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRAL 175
KDLYI +VDAFQG+E+D II+SCVRA+ +GF+ D RR+NV LTRA+ L
Sbjct: 747 GSLDKDLYIKVEVASVDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAKYGL 806
Query: 176 WVMGNAGALTQSDDWAALIADSKARNCYMD--MDSL 209
++GN +L ++ W L+ + + C ++ +D+L
Sbjct: 807 VILGNPRSLARNTLWNHLLIHFREKGCLVEGTLDNL 842
>gi|346976317|gb|EGY19769.1| helicase SEN1 [Verticillium dahliae VdLs.17]
Length = 1968
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 84/150 (56%), Gaps = 1/150 (0%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
+L QYRMHP I FPS+ FY+ +L D ++ L + ++ P+L PY FFDV +E
Sbjct: 1652 MLDTQYRMHPEISYFPSQEFYEAKLVDGPNMAGLRRQAWHASPLLGPYRFFDVQGTQERG 1711
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
R G S N+ E K + +Y + G +GIITPYK QL L++ F
Sbjct: 1712 RKGQ-SLVNLAELKVAMQIYSRFRTDFGRDGNIAGKIGIITPYKAQLFELRNRFAMEYGD 1770
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRAS 151
+ D+ NT DAFQG+E ++II SCVRAS
Sbjct: 1771 QITNDIEFNTTDAFQGRECEIIIFSCVRAS 1800
>gi|190408311|gb|EDV11576.1| helicase [Saccharomyces cerevisiae RM11-1a]
Length = 971
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 119/216 (55%), Gaps = 16/216 (7%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVI--NLPDEVYYKDPVLRPYVFFDVIHGRES 60
L VQYRM+P++ +FPS FY+G L + ++ +P+ + P+ + F +GRE
Sbjct: 634 LEVQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTVPNS-KFPWPIRGIPMMFWANYGREE 692
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
S+ N EA C E + L G+ +G+ITPY+ Q + + +N
Sbjct: 693 ISANGTSFLNRIEAMN--C--ERIITKLFRDGVKPEQIGVITPYEGQRAYILQYMQ--MN 746
Query: 121 SEEGKDLYIN----TVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRAL 175
KDLYI +VDAFQG+E+D II+SCVRA+ +GF+ D RR+NV LTRA+ L
Sbjct: 747 GSLDKDLYIKVEVASVDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAKYGL 806
Query: 176 WVMGNAGALTQSDDWAALIADSKARNCYMD--MDSL 209
++GN +L ++ W L+ + + C ++ +D+L
Sbjct: 807 VILGNPRSLARNTLWNHLLIHFREKGCLVEGTLDNL 842
>gi|6323726|ref|NP_013797.1| ATP-dependent RNA helicase NAM7 [Saccharomyces cerevisiae S288c]
gi|400350|sp|P30771.1|NAM7_YEAST RecName: Full=ATP-dependent helicase NAM7; AltName:
Full=Nonsense-mediated mRNA decay protein 1; AltName:
Full=Nuclear accommodation of mitochondria 7 protein;
AltName: Full=Up-frameshift suppressor 1
gi|4023|emb|CAA44266.1| helicase [Saccharomyces cerevisiae]
gi|173142|gb|AAA35197.1| zinc finger protein [Saccharomyces cerevisiae]
gi|807962|emb|CAA89226.1| Nam7p [Saccharomyces cerevisiae]
gi|207342353|gb|EDZ70140.1| YMR080Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259148654|emb|CAY81899.1| Nam7p [Saccharomyces cerevisiae EC1118]
gi|285814083|tpg|DAA09978.1| TPA: ATP-dependent RNA helicase NAM7 [Saccharomyces cerevisiae
S288c]
gi|323353063|gb|EGA85363.1| Nam7p [Saccharomyces cerevisiae VL3]
gi|392297240|gb|EIW08340.1| Nam7p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 971
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 119/216 (55%), Gaps = 16/216 (7%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVI--NLPDEVYYKDPVLRPYVFFDVIHGRES 60
L VQYRM+P++ +FPS FY+G L + ++ +P+ + P+ + F +GRE
Sbjct: 634 LEVQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTVPNS-KFPWPIRGIPMMFWANYGREE 692
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
S+ N EA C E + L G+ +G+ITPY+ Q + + +N
Sbjct: 693 ISANGTSFLNRIEAMN--C--ERIITKLFRDGVKPEQIGVITPYEGQRAYILQYMQ--MN 746
Query: 121 SEEGKDLYIN----TVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRAL 175
KDLYI +VDAFQG+E+D II+SCVRA+ +GF+ D RR+NV LTRA+ L
Sbjct: 747 GSLDKDLYIKVEVASVDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAKYGL 806
Query: 176 WVMGNAGALTQSDDWAALIADSKARNCYMD--MDSL 209
++GN +L ++ W L+ + + C ++ +D+L
Sbjct: 807 VILGNPRSLARNTLWNHLLIHFREKGCLVEGTLDNL 842
>gi|365989598|ref|XP_003671629.1| hypothetical protein NDAI_0H02120 [Naumovozyma dairenensis CBS 421]
gi|343770402|emb|CCD26386.1| hypothetical protein NDAI_0H02120 [Naumovozyma dairenensis CBS 421]
Length = 993
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 119/215 (55%), Gaps = 14/215 (6%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLRPYVFFDVIHGRESH 61
L +QYRM+P++ +FPS FY+G L + ++ + + P+ + F +GRE
Sbjct: 644 LEIQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTVSDSTFPWPIHGVPMMFWANYGREEL 703
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
SY N EA C E + L G+ +G+ITPY+ Q + + +N
Sbjct: 704 SSNGTSYLNRIEAMN--C--ERIITKLFKDGVKPEQIGVITPYEGQRAYILQYMQ--MNG 757
Query: 122 EEGKDLYIN----TVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALW 176
KDLY+ +VDAFQG+E+D II+SCVRA++ +GF+ D RR+NV LTRA+ L
Sbjct: 758 AMDKDLYVKVEVASVDAFQGREKDYIILSCVRANDQQAIGFLRDPRRLNVGLTRAKYGLV 817
Query: 177 VMGNAGALTQSDDWAALIADSKARNCYMD--MDSL 209
++GN +L+++ W L+ + + C ++ +D+L
Sbjct: 818 ILGNPMSLSRNLLWNHLLIHFREKGCLVEGTLDNL 852
>gi|242051270|ref|XP_002463379.1| hypothetical protein SORBIDRAFT_02g042725 [Sorghum bicolor]
gi|241926756|gb|EER99900.1| hypothetical protein SORBIDRAFT_02g042725 [Sorghum bicolor]
Length = 989
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 106/188 (56%), Gaps = 4/188 (2%)
Query: 21 FYQGRLTDSESVINLP-DEVYYKDPVLRPYVFFDVIHGRESHRGGSVSYQNVDEAKFGVC 79
FY G++++ +V + D ++ + PY F +V G E+ S +N E V
Sbjct: 768 FYDGKISNGPNVTSKSYDRMFLASKIFGPYSFINVDGGHETTEKHGQSLKNTVEVAAVVR 827
Query: 80 LYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNSEEGKDLYINTVDAFQGQE 139
+ + L K S K++VG+++PY Q++ + + N+ +G + + +VD FQG E
Sbjct: 828 IVQRLFKESVSTR-SKLSVGVVSPYNAQVRAIHEKVGKSYNTYDGFSVKVKSVDGFQGAE 886
Query: 140 RDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVMGNAGALTQSDD-WAALIADS 197
D+II+S VR++ G VGF+ +++R NVALTRA+ LW++GN L+ S W ++ D+
Sbjct: 887 EDIIIISTVRSNGAGSVGFLTNLQRTNVALTRAKHCLWIVGNGTTLSNSKSVWQKVVKDA 946
Query: 198 KARNCYMD 205
+ R CY +
Sbjct: 947 RDRGCYFE 954
>gi|114325426|gb|AAH32622.2| SETX protein [Homo sapiens]
Length = 1030
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 114/202 (56%), Gaps = 11/202 (5%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
+ L+VQYRMHP I FPS + Y L + + D +PY+ FDV G S
Sbjct: 605 LQLTVQYRMHPDICLFPSNYVYNRNLKTNRQTEAI---RCSSDWPFQPYLVFDV--GDGS 659
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
R + SY NV E K + + + ++ K + +GIIT YK Q +Q + +
Sbjct: 660 ERRDNDSYINVQEIKLVMEIIKLIKDKRKDVSFR--NIGIITHYKAQKTMIQKDLDKEFD 717
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASN--HGVGFVADIRRMNVALTRARRALWVM 178
+ + ++TVDAFQG+++D +I++CVRA++ +GF+A ++R+NV +TRA+ +L+++
Sbjct: 718 RKGPAE--VDTVDAFQGRQKDCVIVTCVRANSIQGSIGFLASLQRLNVTITRAKYSLFIL 775
Query: 179 GNAGALTQSDDWAALIADSKAR 200
G+ L ++ W LI D++ R
Sbjct: 776 GHLRTLMENQHWNQLIQDAQKR 797
>gi|327200469|pdb|2XZL|A Chain A, Upf1-Rna Complex
Length = 802
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 119/216 (55%), Gaps = 16/216 (7%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVI--NLPDEVYYKDPVLRPYVFFDVIHGRES 60
L VQYRM+P++ +FPS FY+G L + ++ +P+ + P+ + F +GRE
Sbjct: 586 LEVQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTVPNS-KFPWPIRGIPMMFWANYGREE 644
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
S+ N EA C E + L G+ +G+ITPY+ Q + + +N
Sbjct: 645 ISANGTSFLNRIEAMN--C--ERIITKLFRDGVKPEQIGVITPYEGQRAYILQYMQ--MN 698
Query: 121 SEEGKDLYIN----TVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRAL 175
KDLYI +VDAFQG+E+D II+SCVRA+ +GF+ D RR+NV LTRA+ L
Sbjct: 699 GSLDKDLYIKVEVASVDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAKYGL 758
Query: 176 WVMGNAGALTQSDDWAALIADSKARNCYMD--MDSL 209
++GN +L ++ W L+ + + C ++ +D+L
Sbjct: 759 VILGNPRSLARNTLWNHLLIHFREKGCLVEGTLDNL 794
>gi|296482130|tpg|DAA24245.1| TPA: senataxin [Bos taurus]
Length = 823
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 113/202 (55%), Gaps = 11/202 (5%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
+ L++QYRMHP I FPS + Y G L + D +PY+ FDV G E
Sbjct: 403 LQLTIQYRMHPDICLFPSSYIYDGILRTNRGT---ETSRCSSDWPFQPYLVFDVGDGLE- 458
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
R + SY NV E K + L + ++ + + +GIIT YK Q +Q + +
Sbjct: 459 -RRDNDSYVNVQEIKLVMELIKLIKDKRRDVTFR--NIGIITHYKAQKTMIQKDLDKEFD 515
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRA--SNHGVGFVADIRRMNVALTRARRALWVM 178
+ + ++TVDAFQG+++D +I++CVRA + +GF+A ++R+NV +TRA+ +L+++
Sbjct: 516 RKGAAE--VDTVDAFQGRQKDCVIVTCVRANATQGSIGFLASLQRLNVTITRAKYSLFIL 573
Query: 179 GNAGALTQSDDWAALIADSKAR 200
G+ L ++ W LI D++ R
Sbjct: 574 GHLRTLVENRHWYHLIQDAQKR 595
>gi|315231815|ref|YP_004072251.1| ATP-dependent helicase-like protein [Thermococcus barophilus MP]
gi|315184843|gb|ADT85028.1| ATP-dependent helicase-like protein [Thermococcus barophilus MP]
Length = 652
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 123/220 (55%), Gaps = 29/220 (13%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRL-----TDSESVINLPDEVYYK----DPVL---RPY 49
+L +QYRM+ + +FPSR FY GR+ + ++++L V++ D +L P
Sbjct: 442 MLEIQYRMNERLMEFPSREFYNGRIKAYDGVKNITLLDLGIRVFHFGEPWDSILNPKEPL 501
Query: 50 VFFDVIHGRES---HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKL 106
VF D E R GS+S +N EAK L + + K L MG+ ++G+ITPY
Sbjct: 502 VFVDTSKHPEKWERQRKGSLSRENPLEAK----LVKEIVKRLLRMGIRPESIGVITPYDD 557
Query: 107 QLKCLQHEFRNVLNSE-EGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRM 164
Q R++++S E ++ + TVD +QG+E++VII+S VR++ G +GF+ D+RR+
Sbjct: 558 Q--------RDLISSLIENDEIEVKTVDGYQGREKEVIILSFVRSNKKGELGFLTDLRRL 609
Query: 165 NVALTRARRALWVMGNAGALTQSDDWAALIADSKARNCYM 204
NV+LTRA+R L +G++ L + + K + ++
Sbjct: 610 NVSLTRAKRKLIAIGDSETLGAHPTYKRFVEFVKKKGAFI 649
>gi|307102593|gb|EFN50864.1| hypothetical protein CHLNCDRAFT_59413 [Chlorella variabilis]
Length = 762
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/209 (35%), Positives = 110/209 (52%), Gaps = 23/209 (11%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDE--VYYKDPVLRPYVFFDVIHGRE 59
LL VQYRMHP I +FPSRHFY GR+ + + P V + +P P +F ++ G E
Sbjct: 529 LLEVQYRMHPAISEFPSRHFYSGRVQSGVTQQDRPPVRGVPWTNPAC-PVLFINIAEGSE 587
Query: 60 SH------------RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQ 107
SY N +EA+ + + LQ+ L+ + V +++PY Q
Sbjct: 588 QQALAGNNRRGGSGDSSGASYSNSEEAEVAM---KALQRVLQEDDSVQSIV-LLSPYNGQ 643
Query: 108 LKCLQHEFRNVLNSEEGKD---LYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRR 163
++ L E D + ++TVD +QG+E DV+I S VR++ G VGF++D RR
Sbjct: 644 VRLLTSLLSRAELPEGAADRCQITVSTVDGYQGRESDVVIFSTVRSNPAGRVGFLSDERR 703
Query: 164 MNVALTRARRALWVMGNAGALTQSDDWAA 192
+NVA+TRARR L V+GN L +W A
Sbjct: 704 LNVAITRARRGLIVLGNQATLQHDPNWGA 732
>gi|289192489|ref|YP_003458430.1| DNA helicase [Methanocaldococcus sp. FS406-22]
gi|288938939|gb|ADC69694.1| DNA helicase [Methanocaldococcus sp. FS406-22]
Length = 647
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 108/202 (53%), Gaps = 23/202 (11%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESV--INLPDEVYY-------KDPVLRPYVFF 52
+L +QYRM+ I +FP++ FY +L ESV I L D V +D + V F
Sbjct: 449 ILEIQYRMNEKIMEFPNKMFYDNKLKADESVKNITLLDLVKEEEIDEADRDIINEIPVQF 508
Query: 53 DVIHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQ 112
+ G E S SY N++EA E + + +K + K+ +ITPY Q++ L+
Sbjct: 509 IHVEGVERKDKESPSYYNIEEA-------EKVLEVVKKLVKYKIPTNVITPYDAQVRYLR 561
Query: 113 HEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRAR 172
F E D+ +NTVD FQG+E + I++S VR N G F+ D+RR+NVA+TRA+
Sbjct: 562 RMF-----EEHNIDIEVNTVDGFQGRENEAIVISFVRTKNFG--FLRDLRRLNVAITRAK 614
Query: 173 RALWVMGNAGALTQSDDWAALI 194
R L ++GN L Q + +I
Sbjct: 615 RKLILIGNEHLLKQDKVYNEMI 636
>gi|395844356|ref|XP_003794928.1| PREDICTED: probable helicase senataxin [Otolemur garnettii]
Length = 2681
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 114/202 (56%), Gaps = 11/202 (5%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
+ L+VQYRMHP I FPS + Y L + + D +PY+ FDV G S
Sbjct: 2259 LQLTVQYRMHPDICLFPSSYVYNRNLKTNRQTEAI---RCSADWPFQPYLVFDV--GDGS 2313
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
R + SY NV E K + + + +++ K + +GIIT YK Q +Q + +
Sbjct: 2314 ERRDNDSYINVQEIKLVMEIIKLIKEKRKDVTFR--NIGIITHYKAQKTMIQKDLDKEFD 2371
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRAS--NHGVGFVADIRRMNVALTRARRALWVM 178
+ + ++TVDAFQG+++D +I++CVRA+ +GF+A ++R+NV +TRA+ +L+++
Sbjct: 2372 RKGPAE--VDTVDAFQGRQKDCVIVTCVRANAMQGSIGFLASLQRLNVTITRAKYSLFIL 2429
Query: 179 GNAGALTQSDDWAALIADSKAR 200
G+ L ++ W LI D++ R
Sbjct: 2430 GHLRTLMENQHWNYLIQDAQKR 2451
>gi|211827336|gb|AAH32600.2| SETX protein [Homo sapiens]
Length = 930
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 114/202 (56%), Gaps = 11/202 (5%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
+ L+VQYRMHP I FPS + Y L + + D +PY+ FDV G S
Sbjct: 505 LQLTVQYRMHPDICLFPSNYVYNRNLKTNRQTEAI---RCSSDWPFQPYLVFDV--GDGS 559
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
R + SY NV E K + + + ++ K + +GIIT YK Q +Q + +
Sbjct: 560 ERRDNDSYINVQEIKLVMEIIKLIKDKRKDVSFR--NIGIITHYKAQKTMIQKDLDKEFD 617
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASN--HGVGFVADIRRMNVALTRARRALWVM 178
+ + ++TVDAFQG+++D +I++CVRA++ +GF+A ++R+NV +TRA+ +L+++
Sbjct: 618 RKGPAE--VDTVDAFQGRQKDCVIVTCVRANSIQGSIGFLASLQRLNVTITRAKYSLFIL 675
Query: 179 GNAGALTQSDDWAALIADSKAR 200
G+ L ++ W LI D++ R
Sbjct: 676 GHLRTLMENQHWNQLIQDAQKR 697
>gi|50603852|gb|AAH78166.1| SETX protein, partial [Homo sapiens]
Length = 917
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 114/202 (56%), Gaps = 11/202 (5%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
+ L+VQYRMHP I FPS + Y L + + D +PY+ FDV G S
Sbjct: 492 LQLTVQYRMHPDICLFPSNYVYNRNLKTNRQTEAI---RCSSDWPFQPYLVFDV--GDGS 546
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
R + SY NV E K + + + ++ K + +GIIT YK Q +Q + +
Sbjct: 547 ERRDNDSYINVQEIKLVMEIIKLIKDKRKDVSFR--NIGIITHYKAQKTMIQKDLDKEFD 604
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASN--HGVGFVADIRRMNVALTRARRALWVM 178
+ + ++TVDAFQG+++D +I++CVRA++ +GF+A ++R+NV +TRA+ +L+++
Sbjct: 605 RKGPAE--VDTVDAFQGRQKDCVIVTCVRANSIQGSIGFLASLQRLNVTITRAKYSLFIL 662
Query: 179 GNAGALTQSDDWAALIADSKAR 200
G+ L ++ W LI D++ R
Sbjct: 663 GHLRTLMENQHWNQLIQDAQKR 684
>gi|366987891|ref|XP_003673712.1| hypothetical protein NCAS_0A07730 [Naumovozyma castellii CBS 4309]
gi|342299575|emb|CCC67331.1| hypothetical protein NCAS_0A07730 [Naumovozyma castellii CBS 4309]
Length = 992
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 121/216 (56%), Gaps = 16/216 (7%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVI--NLPDEVYYKDPVLRPYVFFDVIHGRES 60
L VQYRM+P++ +FPS FY+G L + ++ +P+ + P+ + F +GRE
Sbjct: 644 LEVQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTVPNSTF-PWPIHDVPMMFWANYGREE 702
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
SY N EA C E + L G+ +G+ITPY+ Q + + +N
Sbjct: 703 LSSNGTSYLNRIEAMN--C--ERIITKLFRDGVKPEQIGVITPYEGQRAYILQYMQ--MN 756
Query: 121 SEEGKDLYIN----TVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRAL 175
K++Y+ +VDAFQG+E+D II+SCVRA++ +GF+ D RR+NV LTRA+ L
Sbjct: 757 GSLDKEMYVKVEVASVDAFQGREKDYIILSCVRANDQQAIGFLRDPRRLNVGLTRAKYGL 816
Query: 176 WVMGNAGALTQSDDWAALIADSKARNCYMD--MDSL 209
++GN +L+++ W L+ + + C ++ +D+L
Sbjct: 817 VILGNPRSLSKNILWNHLLLHFREKGCLVEGTLDNL 852
>gi|7022724|dbj|BAA91701.1| unnamed protein product [Homo sapiens]
Length = 828
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 114/202 (56%), Gaps = 11/202 (5%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
+ L+VQYRMHP I FPS + Y L + + D +PY+ FDV G S
Sbjct: 403 LQLTVQYRMHPDICLFPSNYVYNRNLKTNRQTEAI---RCSSDWPFQPYLVFDV--GDGS 457
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
R + SY NV E K + + + ++ K + +GIIT YK Q +Q + +
Sbjct: 458 ERRDNDSYINVQEIKLVMEIIKLIKDKRKDVSFR--NIGIITHYKAQKTMIQKDLDKEFD 515
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASN--HGVGFVADIRRMNVALTRARRALWVM 178
+ + ++TVDAFQG+++D +I++CVRA++ +GF+A ++R+NV +TRA+ +L+++
Sbjct: 516 RKGPAE--VDTVDAFQGRQKDCVIVTCVRANSIQGSIGFLASLQRLNVTITRAKYSLFIL 573
Query: 179 GNAGALTQSDDWAALIADSKAR 200
G+ L ++ W LI D++ R
Sbjct: 574 GHLRTLMENQHWNQLIQDAQKR 595
>gi|77415498|gb|AAI06018.1| SETX protein, partial [Homo sapiens]
Length = 867
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 114/202 (56%), Gaps = 11/202 (5%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
+ L+VQYRMHP I FPS + Y L + + D +PY+ FDV G S
Sbjct: 442 LQLTVQYRMHPDICLFPSNYVYNRNLKTNRQTEAI---RCSSDWPFQPYLVFDV--GDGS 496
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
R + SY NV E K + + + ++ K + +GIIT YK Q +Q + +
Sbjct: 497 ERRDNDSYINVQEIKLVMEIIKLIKDKRKDVSFR--NIGIITHYKAQKTMIQKDLDKEFD 554
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASN--HGVGFVADIRRMNVALTRARRALWVM 178
+ + ++TVDAFQG+++D +I++CVRA++ +GF+A ++R+NV +TRA+ +L+++
Sbjct: 555 RKGPAE--VDTVDAFQGRQKDCVIVTCVRANSIQGSIGFLASLQRLNVTITRAKYSLFIL 612
Query: 179 GNAGALTQSDDWAALIADSKAR 200
G+ L ++ W LI D++ R
Sbjct: 613 GHLRTLMENQHWNQLIQDAQKR 634
>gi|268569138|ref|XP_002640442.1| C. briggsae CBR-SMG-2 protein [Caenorhabditis briggsae]
Length = 1051
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/223 (35%), Positives = 121/223 (54%), Gaps = 15/223 (6%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRL----TDSESVINLPDEVYYKDPVLRPYVFFDVIHGR 58
L VQYRMHP + +FPS FY G L T++E + D + P FF G
Sbjct: 667 LQVQYRMHPVLSEFPSNAFYDGSLQNGVTENERQMKGID---WSWPTPSKPAFFWHCSGA 723
Query: 59 ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFR 116
E S+ N EA E L L G+ +G+ITPY+ Q + + + +
Sbjct: 724 EELSASGTSFLNRTEAAN----VEKLVSKLIKGGVEPRQIGVITPYEGQRSFIVNYMQTQ 779
Query: 117 NVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASN-HGVGFVADIRRMNVALTRARRAL 175
LNS+ + + I +VDAFQG+E+D II++CVR+++ G+GF++D RR+NVA+TRA+ +
Sbjct: 780 GTLNSKLYEGVEIASVDAFQGREKDYIIVTCVRSNDILGIGFLSDPRRLNVAITRAKYGI 839
Query: 176 WVMGNAGALTQSDDWAALIADSKARN-CYMDMDSLPKEFSVAL 217
V+GNA L++ + W LI K ++ Y S K F++ L
Sbjct: 840 VVVGNAKVLSRHELWYELINHYKKKDMLYEGPISALKPFTMTL 882
>gi|195127339|ref|XP_002008126.1| GI11996 [Drosophila mojavensis]
gi|193919735|gb|EDW18602.1| GI11996 [Drosophila mojavensis]
Length = 1583
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 106/205 (51%), Gaps = 18/205 (8%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESHR 62
LS QYRMHP I +P+ +FY +L ++E L P + PY ++ + ++++
Sbjct: 1366 LSKQYRMHPEICKWPNSYFYDNQLVNAECTHKL------ISPFI-PYCVINLSYTKDTND 1418
Query: 63 GGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNSE 122
S S N +EA+F L + K M + G+I+PY L + +
Sbjct: 1419 ASSRSISNDEEARFVAKLLLEMDKL---MPVKHFHYGLISPYSSHCYTLSQLIPSHMK-- 1473
Query: 123 EGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGNAG 182
+ TVDAFQGQERDVII+S R GVGF+ + +R+NVA+TR R L + GN
Sbjct: 1474 ----ITPQTVDAFQGQERDVIILSNART--RGVGFLTNYQRLNVAITRPTRCLIICGNFD 1527
Query: 183 ALTQSDDWAALIADSKARNCYMDMD 207
L + W L+ D++ RN Y D++
Sbjct: 1528 DLQSVNIWRHLLDDARKRNVYFDLE 1552
>gi|124009432|ref|ZP_01694109.1| dna-binding protein smubp-2 [Microscilla marina ATCC 23134]
gi|123984980|gb|EAY24938.1| dna-binding protein smubp-2 [Microscilla marina ATCC 23134]
Length = 649
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/205 (38%), Positives = 110/205 (53%), Gaps = 24/205 (11%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN---LPDEVYYKDPVLRPYVFFDVIHG 57
++L QYRMH HI F ++ FYQG L +++V+N + + +P F D
Sbjct: 427 VMLKTQYRMHEHIMQFSNKEFYQGELLAADTVVNHRLFAHADLQGEMINQPVEFIDTAGC 486
Query: 58 --RESHRGGSVSYQNVDEA----KFGVCLYEHLQKTLKSM-GLGKVTVGIITPYKLQLKC 110
E + S N DEA K + L LQ M G + GII+PY+ Q+K
Sbjct: 487 GFEEKTMAETGSKYNPDEAGILLKHWIQLATQLQLAEPDMLKEGWFSAGIISPYQAQVKH 546
Query: 111 LQHEFRNVLNSEEGKDLY-------INTVDAFQGQERDVIIMSCVRASNHG-VGFVADIR 162
L+ F E DL IN++D FQGQERDV+ +S VR+++ G +GF+ D R
Sbjct: 547 LKELF------AEHPDLTEVAPWTDINSIDGFQGQERDVVYISMVRSNDKGKIGFLEDTR 600
Query: 163 RMNVALTRARRALWVMGNAGALTQS 187
RMNVALTRAR+ L V+G++G L Q+
Sbjct: 601 RMNVALTRARKKLVVIGDSGTLGQN 625
>gi|123478695|ref|XP_001322509.1| regulator of nonsense transcripts 1 [Trichomonas vaginalis G3]
gi|121905356|gb|EAY10286.1| regulator of nonsense transcripts 1, putative [Trichomonas
vaginalis G3]
Length = 803
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/238 (33%), Positives = 124/238 (52%), Gaps = 28/238 (11%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVL------RPYVFFDVI 55
+L++QYRMHP I FPS FY + D S + + P+L P +F++V
Sbjct: 562 VLTMQYRMHPSISSFPSEAFYMKLVKDGLSA----SDRKWPRPILPWPDKESPVMFWNV- 616
Query: 56 HGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVT----VGIITPYKLQLKCL 111
RE + ++SY NV EA E + + + M V +GIITPY Q L
Sbjct: 617 DSREENYDSAISYVNVKEA-------EAISQIVDMMCRNGVKSGDDIGIITPYTGQQMYL 669
Query: 112 QHEFRNVL---NSEEGKDLYINTVDAFQGQERDVIIMSCVRASN-HGVGFVADIRRMNVA 167
++ N + +++ I +VDAFQG+E++ II SCVRA++ + +GF+ D RR+ V+
Sbjct: 670 MDSLPSLCKYANDDIIQEIEIASVDAFQGREKNFIIFSCVRANDMNDIGFMRDQRRLCVS 729
Query: 168 LTRARRALWVMGNAGALTQSDDWAALIADSKARNCYM--DMDSLPKEFSVALAAKAPG 223
LTRA+ L ++GNA +S W LI + R ++ ++ +L K AL + G
Sbjct: 730 LTRAKYGLVIVGNAATFARSSIWCKLIQNLMNRGLFVEGELSALKKSSFTALVQEEEG 787
>gi|14590762|ref|NP_142832.1| DNA-binding protein [Pyrococcus horikoshii OT3]
gi|3257320|dbj|BAA30003.1| 656aa long hypothetical DNA-binding protein [Pyrococcus horikoshii
OT3]
Length = 656
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 124/219 (56%), Gaps = 29/219 (13%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLP---------DEVYYKDPVLRP---Y 49
+L++QYRM+ I +FPS+ FY GR+ E V N+ ++D +L P
Sbjct: 443 MLTIQYRMNERIMEFPSKEFYDGRIVADERVKNITLGDLGIKVNATGIWRD-ILDPSNVL 501
Query: 50 VFFD--VIHGR-ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKL 106
VF D ++ R E R GS S +N EAK + E L ++ G+ +G+ITPY
Sbjct: 502 VFIDTCMLDNRFERQRRGSESRENPLEAKIVSKIVEKLLES----GVKAEMIGVITPYDD 557
Query: 107 QLKCLQHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMN 165
Q R++++ +++ + TVD +QG+E++VII+S VR++ G +GF+ D+RR+N
Sbjct: 558 Q--------RDLISLNVPEEVEVKTVDGYQGREKEVIILSFVRSNKVGEIGFLKDLRRLN 609
Query: 166 VALTRARRALWVMGNAGALTQSDDWAALIADSKARNCYM 204
V+LTRA+R L ++G++ L+ + + LI + + Y+
Sbjct: 610 VSLTRAKRKLIMIGDSSTLSSHETYKRLIEHVREKGLYV 648
>gi|401827897|ref|XP_003888241.1| superfamily I DNA/RNA helicase [Encephalitozoon hellem ATCC 50504]
gi|392999441|gb|AFM99260.1| superfamily I DNA/RNA helicase [Encephalitozoon hellem ATCC 50504]
Length = 771
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/195 (36%), Positives = 107/195 (54%), Gaps = 16/195 (8%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
+LSVQYRM + ++PS FY G L + + + + P FF V +GRE
Sbjct: 552 VLSVQYRMDTDLCEWPSEMFYNGELLTG-------GKGFCRFDLGIPTNFFYVCYGREEV 604
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
S+ N EA + + HL K G+ + +G+ITPY+ Q + + +
Sbjct: 605 SASGTSFINQAEALYCESIIRHLFKC----GVTESQIGVITPYEGQR---SYILNRIFGA 657
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVMGN 180
E G +L I+ VD FQG+E+D II+S VR++ + G+GFV D RRMNV LTRA+ L ++GN
Sbjct: 658 EPG-NLEISNVDGFQGREKDFIIVSLVRSNLYQGIGFVGDKRRMNVTLTRAKHGLVIIGN 716
Query: 181 AGALTQSDDWAALIA 195
L + D W+ L++
Sbjct: 717 PTTLMKHDIWSNLLS 731
>gi|410979396|ref|XP_003996071.1| PREDICTED: probable helicase senataxin [Felis catus]
Length = 2669
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 116/207 (56%), Gaps = 21/207 (10%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQ-----GRLTDSESVINLPDEVYYKDPVLRPYVFFDVI 55
+ L+VQYRMHP I FPS + Y RLT++ + D +PY+ FDV
Sbjct: 2244 LQLTVQYRMHPDICLFPSNYVYNRSLKTNRLTETNRCSS--------DWPFQPYLVFDV- 2294
Query: 56 HGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEF 115
G S R + SY NV E K + + + ++ + + +GIIT YK Q +Q +
Sbjct: 2295 -GDGSERRDNDSYINVQEIKLVMEIIKLIKDKRRDVTFR--NIGIITHYKAQKTMIQKDL 2351
Query: 116 RNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRAS--NHGVGFVADIRRMNVALTRARR 173
+ + + ++TVDAFQG+++D +I++CVRA+ +GF+A ++R+NV +TRA+
Sbjct: 2352 DKEFDRKGPAE--VDTVDAFQGRQKDCVIVTCVRANAMQGSIGFLASLQRLNVTITRAKY 2409
Query: 174 ALWVMGNAGALTQSDDWAALIADSKAR 200
+L+++G+ L ++ W LI D++ R
Sbjct: 2410 SLFILGHLRTLMENQHWNHLIQDAQKR 2436
>gi|440904008|gb|ELR54581.1| Regulator of nonsense transcripts 1 [Bos grunniens mutus]
Length = 1156
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 99/174 (56%), Gaps = 8/174 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY-YKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + FPS FY+G L + + + + + ++ P +FF V G+E
Sbjct: 733 LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEI 792
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
SY N EA E + L G +GIITPY+ Q L +F L
Sbjct: 793 ASSGTSYLNRTEAAN----VEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSL 848
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRAR 172
+++ +++ I +VDAFQG+E+D II+SCVRA+ H G+GF+ D RR+NVALTRAR
Sbjct: 849 HTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAR 902
>gi|440292009|gb|ELP85251.1| hypothetical protein EIN_084130, partial [Entamoeba invadens IP1]
Length = 1022
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 119/238 (50%), Gaps = 30/238 (12%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDV------- 54
LL+ QYRMHP + F ++ FY RL D + ++ DP + P++F +V
Sbjct: 710 LLNTQYRMHPFLSTFSNKVFYSSRLIDGVTAMD------RSDPNVVPFIFKNVKTPLMFI 763
Query: 55 -IHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH 113
G E S+ NV E+K + L + LK + +GII+PY Q
Sbjct: 764 NCDGSEYIGNSGSSFGNVSESK----IVNKLVQGLKEKNVADDRIGIISPYTTQ------ 813
Query: 114 EFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRAR 172
R++L S + + +VD FQG E+D II S VR++ G+GFV+D RR+NV+LTRAR
Sbjct: 814 --RDLL-STISSTIKVASVDGFQGNEKDYIIFSTVRSNKEIGIGFVSDYRRLNVSLTRAR 870
Query: 173 RALWVMGNAGALTQSDDWAALIADSKARNC-YMDMDSLPKEFSVALAAKAPGYG-PLQ 228
++++GN L + W L NC + + ++ +++ + +K Y P Q
Sbjct: 871 LGMYIVGNVETLAHNRVWGMLFNYLNKNNCIFKNENNTLVQYTPSCVSKETIYNSPFQ 928
>gi|255088141|ref|XP_002505993.1| predicted protein [Micromonas sp. RCC299]
gi|226521264|gb|ACO67251.1| predicted protein [Micromonas sp. RCC299]
Length = 812
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 123/222 (55%), Gaps = 11/222 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + +FPS FY+G L + + + L V + P + F + G E
Sbjct: 593 LQVQYRMHPCLSEFPSNAFYEGALQNGVAAADRLLTHVDFPWPNPTSPMMFWSMTGAEEI 652
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCL-QHEFR-NVL 119
SY N EA + HL + G+ +G++TPY+ Q + QH R VL
Sbjct: 653 SASGTSYLNRAEAAGVEKVVTHLLRA----GVDPGRIGVVTPYEGQRAYVSQHMTRAGVL 708
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+ ++ + +VDAFQG+E+D II+SCVR++ G+GF+ D RR+NVA+TRAR L ++
Sbjct: 709 ATRLYGEVEVASVDAFQGREKDFIILSCVRSNEKTGIGFLNDPRRLNVAMTRARSGLVIL 768
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD--MDSLPKEFSVALA 218
GN L++ + L+ + C ++ +DSL ++ +VAL+
Sbjct: 769 GNPKVLSRQRLFHDLLNHFRDEGCLVEGALDSL-RQSAVALS 809
>gi|392512894|emb|CAD25885.2| INVOLVED IN mRNA DECAY CONTROL (DNA2/NAM7 HELICASE FAMILY)
[Encephalitozoon cuniculi GB-M1]
Length = 776
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/195 (36%), Positives = 106/195 (54%), Gaps = 16/195 (8%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
+LSVQYRM + ++PS FY G L + + + + P FF V +GRE
Sbjct: 557 MLSVQYRMDADLCEWPSEMFYNGELLTG-------GKNFCRFDLGIPVNFFYVCYGREEV 609
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
S+ N EA + + HL K G+ + +G+ITPY+ Q + + +
Sbjct: 610 SASGTSFVNQAEALYCESIIRHLFKC----GVTESQIGVITPYEGQR---SYILNRIFGA 662
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVMGN 180
E G +L I+ VD FQG+E+D II+S VR++ + G+GFV D RRMNV LTRA+ L ++GN
Sbjct: 663 EPG-NLEISNVDGFQGREKDFIIVSLVRSNLYQGIGFVGDKRRMNVTLTRAKHGLVIIGN 721
Query: 181 AGALTQSDDWAALIA 195
L + D W L++
Sbjct: 722 PMTLMKHDMWGNLLS 736
>gi|19074775|ref|NP_586281.1| INVOLVED IN mRNA DECAY CONTROL (DNA2/NAM7 HELICASE FAMILY)
[Encephalitozoon cuniculi GB-M1]
gi|449329865|gb|AGE96133.1| mRNA decay control [Encephalitozoon cuniculi]
Length = 782
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/195 (36%), Positives = 106/195 (54%), Gaps = 16/195 (8%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
+LSVQYRM + ++PS FY G L + + + + P FF V +GRE
Sbjct: 563 MLSVQYRMDADLCEWPSEMFYNGELLTG-------GKNFCRFDLGIPVNFFYVCYGREEV 615
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
S+ N EA + + HL K G+ + +G+ITPY+ Q + + +
Sbjct: 616 SASGTSFVNQAEALYCESIIRHLFKC----GVTESQIGVITPYEGQR---SYILNRIFGA 668
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVMGN 180
E G +L I+ VD FQG+E+D II+S VR++ + G+GFV D RRMNV LTRA+ L ++GN
Sbjct: 669 EPG-NLEISNVDGFQGREKDFIIVSLVRSNLYQGIGFVGDKRRMNVTLTRAKHGLVIIGN 727
Query: 181 AGALTQSDDWAALIA 195
L + D W L++
Sbjct: 728 PMTLMKHDMWGNLLS 742
>gi|148643141|ref|YP_001273654.1| DNA2/NAM7 helicase family transcriptional regulator
[Methanobrevibacter smithii ATCC 35061]
gi|148552158|gb|ABQ87286.1| transcriptional regulator (enhancer-binding protein), DNA2/NAM7
helicase family [Methanobrevibacter smithii ATCC 35061]
Length = 658
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 111/214 (51%), Gaps = 36/214 (16%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESV--INLPDEVYYKDPV-------------- 45
LL+VQYRM+ + FP+ FY G L SV INL DE+ + +
Sbjct: 445 LLNVQYRMNSFLMKFPNSEFYNGNLKSDSSVDDINL-DEIIDSEELSRLKESDVEKQLHN 503
Query: 46 -LRPYVFFD---VIHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGII 101
L+P +F D + + E H S S N EA + + T G+ +GII
Sbjct: 504 NLKPLLFIDTSNLKNNEEKHLKDSKSIINQSEAAIATSIAKFYLGT----GINPKDIGII 559
Query: 102 TPYKLQLKCLQHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVAD 160
+PY Q+ +Q + + + +VD FQG+E+++II+S VR++ +G +GF+ D
Sbjct: 560 SPYADQVNLIQDKI----------PIEVKSVDGFQGREKEIIIISTVRSNKNGNIGFLKD 609
Query: 161 IRRMNVALTRARRALWVMGNAGALTQSDDWAALI 194
+RR+NVA+TRA+R L V+GN L + ++ LI
Sbjct: 610 LRRLNVAITRAKRKLIVIGNKNTLKGNSTYSKLI 643
>gi|17510163|ref|NP_490829.1| Protein SMG-2 [Caenorhabditis elegans]
gi|351051256|emb|CCD73461.1| Protein SMG-2 [Caenorhabditis elegans]
Length = 1069
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 115/203 (56%), Gaps = 10/203 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTD--SESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
L VQYRMHP + +FPS FY G L + +E+ ++ ++ +P FF G E
Sbjct: 672 LQVQYRMHPVLSEFPSNVFYDGSLQNGVTENDRHMTGVDWHWPKPNKP-AFFWHCSGSEE 730
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEF--RNV 118
S+ N EA E L L G+ +G+ITPY+ Q + + +
Sbjct: 731 LSASGTSFLNRTEAAN----VEKLVSKLIKAGVQPHQIGVITPYEGQRSFIVNYMHTQGT 786
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASN-HGVGFVADIRRMNVALTRARRALWV 177
LNS+ +++ I +VDAFQG+E+D II++CVR+++ G+GF++D RR+NVA+TRA+ L +
Sbjct: 787 LNSKLYENVEIASVDAFQGREKDYIIVTCVRSNDILGIGFLSDPRRLNVAITRAKYGLVL 846
Query: 178 MGNAGALTQSDDWAALIADSKAR 200
+GNA L + D W LI K++
Sbjct: 847 VGNAKVLARHDLWHELINHYKSK 869
>gi|242074206|ref|XP_002447039.1| hypothetical protein SORBIDRAFT_06g027382 [Sorghum bicolor]
gi|241938222|gb|EES11367.1| hypothetical protein SORBIDRAFT_06g027382 [Sorghum bicolor]
Length = 1625
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 105/175 (60%), Gaps = 8/175 (4%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRP---YVFFDVIHGR 58
LL++QYRM+P I FP+ FY+ ++ D +V + Y KD + P Y F ++ GR
Sbjct: 582 LLNIQYRMNPCISLFPNAKFYEKKILDGPNVFS---SSYNKDYMGLPFGSYAFINITDGR 638
Query: 59 ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV 118
E G S++N+ E + L + + K+ + G G +++G+++PY Q+ ++
Sbjct: 639 EEKEGAGNSWRNLVEVAVVLHLIQTIFKSWRKRGQG-ISIGVVSPYSSQVAAIKDRLGKK 697
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRAR 172
++ +G + + ++D FQG+E DVII+S VR++ G VGF+AD +R NVALTRAR
Sbjct: 698 YDTSDGFHVRVKSIDGFQGEEDDVIILSTVRSNGRGNVGFLADNQRTNVALTRAR 752
>gi|301777974|ref|XP_002924403.1| PREDICTED: probable helicase senataxin-like [Ailuropoda melanoleuca]
gi|281354488|gb|EFB30072.1| hypothetical protein PANDA_013736 [Ailuropoda melanoleuca]
Length = 2691
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 115/203 (56%), Gaps = 13/203 (6%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRL-TDSESVINLPDEVYYKDPVLRPYVFFDVIHGRE 59
+ L+VQYRMHP I FPS + Y L T+ ++ N D +PY+ FDV G
Sbjct: 2266 LQLTVQYRMHPDICLFPSNYVYNRSLKTNRQTETNR----CSSDWPFQPYLVFDV--GDG 2319
Query: 60 SHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVL 119
S R + SY NV E K + + + ++ + + +GIIT YK Q +Q +
Sbjct: 2320 SERRDNDSYVNVQEIKLVMEIIKLIKDKRRDVTFR--NIGIITHYKAQKMMIQKDLDKEF 2377
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH--GVGFVADIRRMNVALTRARRALWV 177
+ + + ++TVD FQG+++D +I++CVRA+ +GF+A ++R+NV +TRA+ +L++
Sbjct: 2378 DRKGPAE--VDTVDGFQGRQKDCVIVTCVRANTMQGSIGFLASLQRLNVTITRAKYSLFI 2435
Query: 178 MGNAGALTQSDDWAALIADSKAR 200
+G+ L ++ W LI D++ R
Sbjct: 2436 LGHLRTLMENQHWNQLIQDAQKR 2458
>gi|221330969|ref|NP_001137907.1| CG7504, isoform B [Drosophila melanogaster]
gi|220902511|gb|ACL83262.1| CG7504, isoform B [Drosophila melanogaster]
Length = 1676
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 111/205 (54%), Gaps = 18/205 (8%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESHR 62
LS QYRMHP I +P+++FY+ +L ++E + P++ PY ++ + +S+
Sbjct: 1467 LSTQYRMHPEICRWPNQYFYEDQLINAECT------ARFASPLI-PYCVINLKYTCDSNG 1519
Query: 63 GGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNSE 122
+ S N +EA+F L + K + S + + G+I+PY+ Q L + +N
Sbjct: 1520 AQNKSISNNEEARFVAKLLTEMDKHMPS---KRFSYGLISPYQNQCYALSQVIPSHMN-- 1574
Query: 123 EGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGNAG 182
+ TVD++QG E+DVII+S R G GF+ + +R+NVALTR RR L + GN
Sbjct: 1575 ----ITPQTVDSYQGLEKDVIIISNART--RGCGFLTNYQRLNVALTRPRRCLVICGNFE 1628
Query: 183 ALTQSDDWAALIADSKARNCYMDMD 207
L + W L+ D++ R Y ++D
Sbjct: 1629 DLKSVEMWRNLLDDARKRKVYFNLD 1653
>gi|396082359|gb|AFN83969.1| putative DNA helicase [Encephalitozoon romaleae SJ-2008]
Length = 779
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 107/195 (54%), Gaps = 16/195 (8%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
+LS+QYRM + ++PS FY G L + + + + P FF V +GRE
Sbjct: 560 VLSIQYRMDTDLCEWPSEMFYNGELLTG-------GKRFCRFDLGIPTNFFYVCYGREEV 612
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
S+ N EA + + HL K G+ + +G+ITPY+ Q + + +
Sbjct: 613 SASGTSFINQAEALYCESIIRHLFKC----GVTENQIGVITPYEGQR---SYILNRIFGA 665
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVMGN 180
E G +L I+ VD FQG+E+D II+S VR++ + G+GFV D RRMNV LTRA+ L ++GN
Sbjct: 666 EPG-NLEISNVDGFQGREKDFIIVSLVRSNLYQGIGFVGDKRRMNVTLTRAKHGLVIIGN 724
Query: 181 AGALTQSDDWAALIA 195
L + D W+ L++
Sbjct: 725 PTTLMKHDMWSNLLS 739
>gi|354501487|ref|XP_003512822.1| PREDICTED: hypothetical protein LOC100755417 [Cricetulus griseus]
Length = 1856
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 116/225 (51%), Gaps = 27/225 (12%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPV---LRPYVFFDVIHG 57
++L QYR HP I + FY+G L + S + PV L F++V
Sbjct: 1625 VVLRTQYRCHPVISAIANDLFYEGNLMNGISETE-------RSPVVEWLPTLCFYNVTGA 1677
Query: 58 RESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRN 117
+ R S +QNV EA F + L ++L + G+ +G+IT YK Q+ + H
Sbjct: 1678 EQVERENS--FQNVAEAAFTL----KLIQSLIASGIAGSMIGVITLYKSQMYKICHLLSA 1731
Query: 118 V-LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALW 176
+ N E K + ++TVDAFQG E+++II+SCVR VGF+ +RMNVALTR+RR L
Sbjct: 1732 MDFNHPEAKAVQVSTVDAFQGAEKEIIILSCVRT--RQVGFIDSEKRMNVALTRSRRHLL 1789
Query: 177 VMGNAGALTQSDDWAALIADSKAR--------NCYMDMDSLPKEF 213
++G+ L ++ W +I + R +C +D L +++
Sbjct: 1790 IVGSLSCLRKNRLWERVIQHCEGREDGLQHASHCEQQLDHLLRDY 1834
>gi|218261116|ref|ZP_03476067.1| hypothetical protein PRABACTJOHN_01731 [Parabacteroides johnsonii
DSM 18315]
gi|218224216|gb|EEC96866.1| hypothetical protein PRABACTJOHN_01731 [Parabacteroides johnsonii
DSM 18315]
Length = 638
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/194 (39%), Positives = 111/194 (57%), Gaps = 17/194 (8%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDV--IHGRE 59
LL QYRM+ I FPSR FY+ L + V + + + PV V+ D H E
Sbjct: 429 LLKTQYRMNESIMRFPSRWFYRDELQSAPEVKH-RGILEFDTPV----VWLDTADCHFEE 483
Query: 60 SHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVT-----VGIITPYKLQLKCLQHE 114
S+S N DEA L LQK ++ +G +V G+I+PYK Q++ ++
Sbjct: 484 DQLTDSMSRINKDEATL---LVSTLQKYIEKIGKERVLDESIDFGLISPYKSQVQYIRGL 540
Query: 115 F-RNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRAR 172
RNV + + ++TVD FQGQERDVI++S VRA++ G +GF+ D+RRMNVA+TRAR
Sbjct: 541 VKRNVFFKPFRRLITVHTVDGFQGQERDVIMISLVRANDKGRIGFLGDLRRMNVAITRAR 600
Query: 173 RALWVMGNAGALTQ 186
L ++G+A LT+
Sbjct: 601 MKLMILGDAPTLTR 614
>gi|423344038|ref|ZP_17321751.1| hypothetical protein HMPREF1077_03181 [Parabacteroides johnsonii
CL02T12C29]
gi|409213558|gb|EKN06575.1| hypothetical protein HMPREF1077_03181 [Parabacteroides johnsonii
CL02T12C29]
Length = 637
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/194 (39%), Positives = 111/194 (57%), Gaps = 17/194 (8%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDV--IHGRE 59
LL QYRM+ I FPSR FY+ L + V + + + PV V+ D H E
Sbjct: 428 LLKTQYRMNESIMRFPSRWFYRDELQSAPEVKH-RGILEFDTPV----VWLDTADCHFEE 482
Query: 60 SHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVT-----VGIITPYKLQLKCLQHE 114
S+S N DEA L LQK ++ +G +V G+I+PYK Q++ ++
Sbjct: 483 DQLTDSMSRINKDEATL---LVSTLQKYIEKIGKERVLDESIDFGLISPYKSQVQYIRGL 539
Query: 115 F-RNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRAR 172
RNV + + ++TVD FQGQERDVI++S VRA++ G +GF+ D+RRMNVA+TRAR
Sbjct: 540 VKRNVFFKPFRRLITVHTVDGFQGQERDVIMISLVRANDKGRIGFLGDLRRMNVAITRAR 599
Query: 173 RALWVMGNAGALTQ 186
L ++G+A LT+
Sbjct: 600 MKLMILGDAPTLTR 613
>gi|224077420|ref|XP_002305251.1| predicted protein [Populus trichocarpa]
gi|222848215|gb|EEE85762.1| predicted protein [Populus trichocarpa]
Length = 1011
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/213 (34%), Positives = 119/213 (55%), Gaps = 26/213 (12%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLR-----PYVFFDVIH 56
LL++QYRMHP I FP+ FY ++ D+ +V E Y+ L+ Y F ++ H
Sbjct: 614 LLNIQYRMHPSISLFPNTEFYGRQVLDAPNV----QETGYRRRFLQGDMFESYSFINIAH 669
Query: 57 GRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEF- 115
G+E S++N EA + L K + G KV++GII+PY+ Q+ +Q +
Sbjct: 670 GKEEFVEQR-SFKNTVEAAAAADIVGRLFKDINGTG-QKVSIGIISPYQAQVHAIQEKIG 727
Query: 116 RNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRA 174
+ + +S+ + + TVD FQG E D+II+S VR++ +G VGFV++ +R NVALTRAR
Sbjct: 728 KFISDSDSAFSVSVGTVDGFQGGEEDLIIISTVRSNENGSVGFVSNPQRANVALTRAR-- 785
Query: 175 LWVMGNAGALTQSDDWAALIADSKARNCYMDMD 207
+G++ W ++ D+K R C+ + +
Sbjct: 786 ------SGSI-----WKKIVNDAKHRQCFYNAE 807
>gi|67474564|ref|XP_653031.1| regulator of nonsense transcripts [Entamoeba histolytica HM-1:IMSS]
gi|56469949|gb|EAL47645.1| regulator of nonsense transcripts, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 915
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 107/203 (52%), Gaps = 30/203 (14%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSES--------VINL-PDEVYYKDPVLRPYVFF 52
+L QYRMHP I +F ++ FY +L + S +IN PD Y +P++ F
Sbjct: 655 MLKTQYRMHPAISEFSNKMFYSSKLENGVSSKDRFDNRIINFFPD---YTNPIM-----F 706
Query: 53 DVIHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQ 112
G E + SY N E + + E ++K LK+ + + +GII+PY+ Q
Sbjct: 707 INCDGTEQYGSSGTSYNNAGEVQI---IQEVVEKFLKN-KIKENEIGIISPYQAQ----- 757
Query: 113 HEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRA 171
+ +++ + + +D FQG E++ II SCVR++ GVGFV D +R+NVALTRA
Sbjct: 758 ---QELISQYVSTKIKVANIDGFQGNEKEYIIFSCVRSNQTLGVGFVNDYKRLNVALTRA 814
Query: 172 RRALWVMGNAGALTQSDDWAALI 194
+R L ++GN L S W LI
Sbjct: 815 KRGLIIIGNIPTLVTSKVWNMLI 837
>gi|345518256|ref|ZP_08797710.1| hypothetical protein BSFG_02007 [Bacteroides sp. 4_3_47FAA]
gi|254835551|gb|EET15860.1| hypothetical protein BSFG_02007 [Bacteroides sp. 4_3_47FAA]
Length = 630
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 106/189 (56%), Gaps = 7/189 (3%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL VQYRM+ I F S FYQG L + V + Y P+ ++ + + E
Sbjct: 429 LLKVQYRMNDEIMRFSSEWFYQGELKSAPEV-KYRSILDYDTPI--EWINTEGMECNEEF 485
Query: 62 RGGSVSYQNVDEAKFGVC-LYEHLQKTLKSMGLG-KVTVGIITPYKLQLKCLQHEF-RNV 118
G S N +EA + L ++ K K L ++ VG+I+PYK Q++ L+ R+
Sbjct: 486 VGESFGRINKEEAALSISQLTNYINKIGKDRFLEERIDVGLISPYKAQVQYLRQLIKRDA 545
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWV 177
+ INTVD FQGQERDVI++S VRA+ G +GF+ D+RRMNVA+TRAR L +
Sbjct: 546 FFKPYRHLITINTVDGFQGQERDVILISLVRANEEGQIGFLNDLRRMNVAITRARMKLII 605
Query: 178 MGNAGALTQ 186
+G+A LT+
Sbjct: 606 LGDASTLTK 614
>gi|319643934|ref|ZP_07998509.1| helicase [Bacteroides sp. 3_1_40A]
gi|317384458|gb|EFV65425.1| helicase [Bacteroides sp. 3_1_40A]
Length = 630
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 106/189 (56%), Gaps = 7/189 (3%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL VQYRM+ I F S FYQG L + V + Y P+ ++ + + E
Sbjct: 429 LLKVQYRMNDEIMRFSSEWFYQGELKSAPEV-KYRSILDYDTPI--EWINTEGMECNEEF 485
Query: 62 RGGSVSYQNVDEAKFGVC-LYEHLQKTLKSMGLG-KVTVGIITPYKLQLKCLQHEF-RNV 118
G S N +EA + L ++ K K L ++ VG+I+PYK Q++ L+ R+
Sbjct: 486 VGESFGRINKEEAALSISQLTNYINKIGKDRFLEERIDVGLISPYKAQVQYLRQLIKRDA 545
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWV 177
+ INTVD FQGQERDVI++S VRA+ G +GF+ D+RRMNVA+TRAR L +
Sbjct: 546 FFKPYRHLITINTVDGFQGQERDVILISLVRANEEGQIGFLNDLRRMNVAITRARMKLII 605
Query: 178 MGNAGALTQ 186
+G+A LT+
Sbjct: 606 LGDASTLTK 614
>gi|300175280|emb|CBK20591.2| unnamed protein product [Blastocystis hominis]
Length = 861
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/205 (35%), Positives = 109/205 (53%), Gaps = 10/205 (4%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL VQYRMHP + F + FY+GRL D N P + P +F++V GRES
Sbjct: 655 LLCVQYRMHPALSVFSNHKFYEGRLEDGIGEANRPLIKFCYPNTKVPLLFWNV-KGRESI 713
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
S+ NV EA V ++ K L G+ + +G+IT Y Q L +N+L
Sbjct: 714 GNTGSSFLNVQEATAVV----NIVKELMQCGIKEKKIGVITSYTGQKVLL----KNLLQQ 765
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRALWVMGN 180
+ +V+ FQG+E D I++SCVR++ +GF+ D +R+NVALTRAR + ++G+
Sbjct: 766 SRLGKVECASVNTFQGREMDYIVLSCVRSNPMRIIGFLKDPKRLNVALTRARFGMIIVGD 825
Query: 181 AGALTQSDDWAALIADSKARNCYMD 205
L +D W ++ +A N +D
Sbjct: 826 TSVLKYNDLWKEYLSYHQALNTLVD 850
>gi|373958634|ref|ZP_09618594.1| ATPase AAA [Mucilaginibacter paludis DSM 18603]
gi|373895234|gb|EHQ31131.1| ATPase AAA [Mucilaginibacter paludis DSM 18603]
Length = 636
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 119/210 (56%), Gaps = 15/210 (7%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
+LL QYRM+ I + S+ FYQ +L SV ++ D P+ + D
Sbjct: 425 VLLEEQYRMNEAIMTYSSQVFYQNKLQAHASVAQ--RLLFTADA---PFSYVDTAGCGFD 479
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVT-----VGIITPYKLQLKCLQHEF 115
+ S N +EA F L++HL+K + + T + I++PYK Q++ L+ +
Sbjct: 480 EKPEGTSMANAEEAGF---LFKHLEKLVTELNEHYTTENFPTIAIVSPYKEQIRLLKDQQ 536
Query: 116 RNVLNSEEGKD-LYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARR 173
++ + +D + +NT+D+FQGQERD++ +S R++ G +GF++DIRRMNVA+TRAR+
Sbjct: 537 QHWPGLQLYQDKISVNTIDSFQGQERDIVYISMTRSNTKGEIGFLSDIRRMNVAMTRARK 596
Query: 174 ALWVMGNAGALTQSDDWAALIADSKARNCY 203
L ++G++ L Q+ +A +I ++ N Y
Sbjct: 597 KLIIIGDSSTLAQAPFYADMIKYAEQINGY 626
>gi|423312487|ref|ZP_17290424.1| hypothetical protein HMPREF1058_01036 [Bacteroides vulgatus
CL09T03C04]
gi|392688175|gb|EIY81464.1| hypothetical protein HMPREF1058_01036 [Bacteroides vulgatus
CL09T03C04]
Length = 630
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 106/189 (56%), Gaps = 7/189 (3%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL VQYRM+ I F S FYQG L + V + Y P+ ++ + + E
Sbjct: 429 LLKVQYRMNDEIMRFSSEWFYQGELKSAPEV-KYRSILDYDTPI--EWINTEGMECNEEF 485
Query: 62 RGGSVSYQNVDEAKFGVC-LYEHLQKTLKSMGLG-KVTVGIITPYKLQLKCLQHEF-RNV 118
G S N +EA + L ++ K K L ++ VG+I+PYK Q++ L+ R+
Sbjct: 486 VGESFGRINKEEAALSISQLTNYINKIGKDRFLEERIDVGLISPYKAQVQYLRQLIKRDA 545
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWV 177
+ INTVD FQGQERDVI++S VRA+ G +GF+ D+RRMNVA+TRAR L +
Sbjct: 546 FFKPYRHLITINTVDGFQGQERDVILISLVRANEEGQIGFLNDLRRMNVAITRARMKLII 605
Query: 178 MGNAGALTQ 186
+G+A LT+
Sbjct: 606 LGDASTLTK 614
>gi|406695570|gb|EKC98873.1| hypothetical protein A1Q2_06844 [Trichosporon asahii var. asahii
CBS 8904]
Length = 1000
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 105/188 (55%), Gaps = 8/188 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + +FPS FY+G L + + L V + PV + F G E
Sbjct: 626 LQVQYRMHPCLSEFPSNMFYEGTLQNGVTAPERLRKNVDFPWPVADTPMMFHQNTGTEEI 685
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
S+ N EA + + + K KS G+ +G+ITPY+ Q + + L
Sbjct: 686 SSSGTSFVNRTEA---ANVEKMVTKFFKS-GVLPSQIGVITPYEGQRSFIVSYMQLHGAL 741
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+ K++ + +VDAFQG+E+D II+SCVR++ H G+GF+ D RR+NVALTRA+ + ++
Sbjct: 742 KKDLYKEVEVASVDAFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAKYGVVIL 801
Query: 179 GNAGALTQ 186
GN L++
Sbjct: 802 GNPKVLSK 809
>gi|401885778|gb|EJT49866.1| ATP dependent helicase [Trichosporon asahii var. asahii CBS 2479]
Length = 1013
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 105/188 (55%), Gaps = 8/188 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + +FPS FY+G L + + L V + PV + F G E
Sbjct: 639 LQVQYRMHPCLSEFPSNMFYEGTLQNGVTAPERLRKNVDFPWPVADTPMMFHQNTGTEEI 698
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
S+ N EA + + + K KS G+ +G+ITPY+ Q + + L
Sbjct: 699 SSSGTSFVNRTEA---ANVEKMVTKFFKS-GVLPSQIGVITPYEGQRSFIVSYMQLHGAL 754
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+ K++ + +VDAFQG+E+D II+SCVR++ H G+GF+ D RR+NVALTRA+ + ++
Sbjct: 755 KKDLYKEVEVASVDAFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAKYGVVIL 814
Query: 179 GNAGALTQ 186
GN L++
Sbjct: 815 GNPKVLSK 822
>gi|303275724|ref|XP_003057156.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461508|gb|EEH58801.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 1100
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 110/207 (53%), Gaps = 8/207 (3%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + +FPS FY+G L + + L V + P + F + G E
Sbjct: 703 LQVQYRMHPCLSEFPSNTFYEGALQNGVAAAERLMTHVNFPWPKPSTPMMFWSMTGAEEI 762
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLK-CLQHEFR-NVL 119
SY N EA + H + G+ +G++TPY+ Q +QH R VL
Sbjct: 763 SASGTSYLNRTEAVSVEKIVTHFLRA----GVAPEALGVVTPYEGQRAYVVQHMTRAGVL 818
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+ ++ + +VD+FQG+E+D II+SCVR++ G+GF+ D RR+NVA+TRAR L ++
Sbjct: 819 RQQLYNEIQVASVDSFQGREKDFIILSCVRSNEKAGIGFLNDPRRLNVAMTRARSGLVIL 878
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN L++ + L+ + C ++
Sbjct: 879 GNPKVLSRQPLFHDLLQHFRDCECLVE 905
>gi|150004508|ref|YP_001299252.1| helicase [Bacteroides vulgatus ATCC 8482]
gi|149932932|gb|ABR39630.1| putative helicase [Bacteroides vulgatus ATCC 8482]
Length = 630
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 106/189 (56%), Gaps = 7/189 (3%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL VQYRM+ I F S FYQG L + V + Y P+ ++ + + E
Sbjct: 429 LLKVQYRMNDEIMRFSSEWFYQGELKSAPEV-KYRSILDYDTPI--EWINTEGMECNEEF 485
Query: 62 RGGSVSYQNVDEAKFGVC-LYEHLQKTLKSMGLG-KVTVGIITPYKLQLKCLQHEF-RNV 118
G S N +EA + L ++ K K L ++ VG+I+PYK Q++ L+ R+
Sbjct: 486 VGESFGRINKEEAALSISQLTNYINKIGKDRFLEERIDVGLISPYKAQVQYLRQLIKRDA 545
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWV 177
+ INTVD FQGQERDVI++S VRA+ G +GF+ D+RRMNVA+TRAR L +
Sbjct: 546 FFKPYRHLITINTVDGFQGQERDVILISLVRANEEGQIGFLNDLRRMNVAITRARMKLII 605
Query: 178 MGNAGALTQ 186
+G+A LT+
Sbjct: 606 LGDASTLTK 614
>gi|73967706|ref|XP_537811.2| PREDICTED: probable helicase senataxin isoform 1 [Canis lupus
familiaris]
Length = 2693
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 115/203 (56%), Gaps = 13/203 (6%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRL-TDSESVINLPDEVYYKDPVLRPYVFFDVIHGRE 59
+ L+VQYRMHP I FPS + Y L T+ ++ N D +PY+ FDV G
Sbjct: 2268 LQLTVQYRMHPDICLFPSNYVYNRSLKTNRQTETNR----CSSDWPFQPYLVFDV--GDG 2321
Query: 60 SHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVL 119
S R + SY NV E K + + + ++ + + +GIIT YK Q +Q +
Sbjct: 2322 SERRDNDSYVNVQEIKLVMEIIKLIKDKRRDVTFR--NIGIITHYKAQKTMIQKDLDKEF 2379
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRAS--NHGVGFVADIRRMNVALTRARRALWV 177
+ + + ++TVD FQG+++D +I++CVRA+ +GF+A ++R+NV +TRA+ +L++
Sbjct: 2380 DRKGPAE--VDTVDGFQGRQKDCVIVTCVRANAMQGSIGFLASLQRLNVTITRAKYSLFI 2437
Query: 178 MGNAGALTQSDDWAALIADSKAR 200
+G+ L ++ W LI D++ R
Sbjct: 2438 LGHLRTLMENQHWNHLIQDAQKR 2460
>gi|291243686|ref|XP_002741733.1| PREDICTED: regulator of nonsense transcripts 1-like, partial
[Saccoglossus kowalevskii]
Length = 974
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/213 (34%), Positives = 111/213 (52%), Gaps = 20/213 (9%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKD-----PVLRPYVFFDVIHG 57
L VQYRMHP + FPS FY+G L + + P E K P + F G
Sbjct: 544 LQVQYRMHPILSSFPSNIFYEGSLQNGVT----PGERSNKSLDFPWPQTDKPMLFYATTG 599
Query: 58 RESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQ----LKCLQH 113
+E SY N EA E + G+ +GIITPY+ Q ++ +QH
Sbjct: 600 QEEIASSGTSYLNRTEAAN----VEKITTRFLRCGIRPEQIGIITPYEGQRSFIVQYMQH 655
Query: 114 EFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRAR 172
L+++ +++ I +VDAFQG+E+D II+SCVRA+ H G+GF+ D RR+NVALTR +
Sbjct: 656 N--GSLHAKLYQEIEIASVDAFQGREKDYIILSCVRANEHQGIGFLNDPRRLNVALTRCK 713
Query: 173 RALWVMGNAGALTQSDDWAALIADSKARNCYMD 205
+ ++GN L++ W L+ K + ++
Sbjct: 714 FGIIIVGNPKVLSKQALWNHLLNHYKEQKVLVE 746
>gi|195376277|ref|XP_002046923.1| GJ12221 [Drosophila virilis]
gi|194154081|gb|EDW69265.1| GJ12221 [Drosophila virilis]
Length = 1858
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 106/205 (51%), Gaps = 18/205 (8%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESHR 62
LS+QYRMHP I +P+ +FY +L ++ L P++ PY ++ + R+++
Sbjct: 1641 LSMQYRMHPEICRWPNSYFYDNQLVNASCTERL------ISPLI-PYCVINLSYTRDTND 1693
Query: 63 GGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNSE 122
S S N +EA+F L + K M + + G+ITPY L +
Sbjct: 1694 ASSRSISNDEEARFVAKLLIEMDKL---MPAKRFSYGLITPYSNHCYTLSQVIPAHMK-- 1748
Query: 123 EGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGNAG 182
+ TVDA+QGQERDV+I+S R GVGF+ + +R+NVA+TR +R L + GN
Sbjct: 1749 ----ITPQTVDAYQGQERDVVILSNART--RGVGFLTNYQRLNVAITRPQRCLVICGNFD 1802
Query: 183 ALTQSDDWAALIADSKARNCYMDMD 207
L W L+ D++ R Y D++
Sbjct: 1803 DLQSVKIWRHLLDDARKRGVYFDLE 1827
>gi|389852292|ref|YP_006354526.1| DNA2-NAM7 helicase family protein [Pyrococcus sp. ST04]
gi|388249598|gb|AFK22451.1| putative DNA2-NAM7 helicase family protein [Pyrococcus sp. ST04]
Length = 633
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 128/225 (56%), Gaps = 28/225 (12%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLP--------DEVYYKDPVLRP---YV 50
+L++QYRM+ I +FPS+ FY G++ ESV N+ +E +K+ VL P V
Sbjct: 415 MLTIQYRMNERIMEFPSKEFYGGKIKAHESVKNITLADLGIKIEEENWKE-VLDPKTVLV 473
Query: 51 FFD---VIHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQ 107
F D + + E R GS S +N EAK + + K L + G+ +G+ITPY Q
Sbjct: 474 FIDTSKLENKWERQRRGSESRENPLEAK----IVAKIVKKLLNAGVKPEWIGVITPYDDQ 529
Query: 108 LKCLQHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNV 166
R++++ +++ + TVD +QG+E++VII+S VR++ G +GF+ D+RR+NV
Sbjct: 530 --------RDLISMSVPEEVEVKTVDGYQGREKEVIILSFVRSNKKGEIGFLKDLRRLNV 581
Query: 167 ALTRARRALWVMGNAGALTQSDDWAALIADSKARNCYMDMDSLPK 211
+LTRA+R L ++G++ L+ + + +I + ++ + + K
Sbjct: 582 SLTRAKRKLIMVGDSSTLSSHETYKRMIEHVRKYGRIIEAEEIIK 626
>gi|294778267|ref|ZP_06743693.1| putative DNA helicase [Bacteroides vulgatus PC510]
gi|294447895|gb|EFG16469.1| putative DNA helicase [Bacteroides vulgatus PC510]
Length = 630
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 106/189 (56%), Gaps = 7/189 (3%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL VQYRM+ I F S FYQG L + V + Y P+ ++ + + E
Sbjct: 429 LLKVQYRMNDEIMRFSSEWFYQGELKSAPEV-KYRSILDYDTPI--EWINTEGMECNEEF 485
Query: 62 RGGSVSYQNVDEAKFGVC-LYEHLQKTLKSMGLG-KVTVGIITPYKLQLKCLQHEF-RNV 118
G S N +EA + L ++ K K L ++ VG+I+PYK Q++ L+ R+
Sbjct: 486 VGESFGRINKEEAALSISQLTNYINKIGKDRFLEERIDVGLISPYKAQVQYLRQLIKRDA 545
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWV 177
+ INTVD FQGQERDVI++S VRA+ G +GF+ D+RRMNVA+TRAR L +
Sbjct: 546 FFKPYRHLITINTVDGFQGQERDVILISLVRANEEGQIGFLNDLRRMNVAITRARMKLII 605
Query: 178 MGNAGALTQ 186
+G+A LT+
Sbjct: 606 LGDASTLTK 614
>gi|255533226|ref|YP_003093598.1| DEAD/DEAH box helicase [Pedobacter heparinus DSM 2366]
gi|255346210|gb|ACU05536.1| DEAD-like helicase [Pedobacter heparinus DSM 2366]
Length = 636
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 77/215 (35%), Positives = 122/215 (56%), Gaps = 25/215 (11%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIH-GRE 59
+LL QYRMH I + S+ FY+G+L +V ++ D L F D G E
Sbjct: 425 VLLEEQYRMHTQIMAYSSKVFYEGKLKAHAAVAG--HLLFPGDTALN---FIDTAGCGFE 479
Query: 60 SHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKV-----TVGIITPYKLQLKCLQHE 114
R G+ Y N +EA F L +HL + + + V ++G+I+PYK Q+ L
Sbjct: 480 EQREGTSIY-NSEEAVF---LLKHLTQLVLKLAEVYVAENFPSIGVISPYKQQIYIL--- 532
Query: 115 FRNVLNSEEGKDLYI-----NTVDAFQGQERDVIIMSCVRASNHGV-GFVADIRRMNVAL 168
+++L + LYI NT+D+FQGQERD++ + R++N GV GF++DIRRMNVA+
Sbjct: 533 -KDLLLNHPVLQLYIEKISVNTIDSFQGQERDIVYIGMTRSNNEGVIGFLSDIRRMNVAM 591
Query: 169 TRARRALWVMGNAGALTQSDDWAALIADSKARNCY 203
TRAR+ L V+G++ L++ ++ IA +++ + Y
Sbjct: 592 TRARKKLVVIGDSATLSRLPFYSDFIAYAESIDAY 626
>gi|392572780|gb|EIW65924.1| hypothetical protein TREMEDRAFT_72495 [Tremella mesenterica DSM
1558]
Length = 734
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 109/197 (55%), Gaps = 26/197 (13%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESV-----INLP----DEVYYKDPVLRPYVFF 52
+L VQYRM+ HI FPS Y+G+L +SV ++LP DE K+ + VFF
Sbjct: 517 VLQVQYRMNAHIASFPSSALYEGKLVADQSVALHTLLDLPDVKADEPDAKETLGETVVFF 576
Query: 53 DVIHGR--ESHRG-----GSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYK 105
D E G G S N +EA + + + L + G+ +GIITPY+
Sbjct: 577 DTAGCEYYEKDEGGDNGLGEGSKMNENEA----VVVDKWARRLIASGISPADIGIITPYQ 632
Query: 106 LQLKCLQHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRM 164
Q+ L R+ + ++ I TVD QGQER+VII+S VR+++ G VGF+ + RR+
Sbjct: 633 AQVSLLSSMLRD-----DFPEMTIGTVDGLQGQEREVIILSLVRSNSTGEVGFLGEYRRL 687
Query: 165 NVALTRARRALWVMGNA 181
NVA+TRA+R L V+G++
Sbjct: 688 NVAMTRAKRQLCVVGDS 704
>gi|308810817|ref|XP_003082717.1| tRNA-splicing endonuclease positive effector (SEN1) (ISS)
[Ostreococcus tauri]
gi|116061186|emb|CAL56574.1| tRNA-splicing endonuclease positive effector (SEN1) (ISS)
[Ostreococcus tauri]
Length = 878
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 123/218 (56%), Gaps = 17/218 (7%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL QYRMHP I +PS +Y GR+ D+E VI + + L PYVF DV G E +
Sbjct: 673 LLDTQYRMHPRISSWPSARYYSGRVMDAEHVIEREQPLDFP-RWLPPYVFVDVKRGVE-Y 730
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKV-TVGIITPYKLQLKCLQHEFRNVLN 120
G +S +N EA+ VC ++++ G ++ +IT Y Q++ + R L
Sbjct: 731 GGRGMSKRNDAEAE-AVC------DAIQAIRRGSTFSIVVITFYSAQVR----KIRAALA 779
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVMG 179
+ + +++VD+FQG E DV++ S VR++ VGF++D RR+NVALTRA+ +L +
Sbjct: 780 ARGLRGFDVHSVDSFQGSEADVVVCSAVRSNTKARVGFLSDSRRLNVALTRAKHSLVFLA 839
Query: 180 NAGALTQS--DDWAALIADSKARNCYMDMDSLPKEFSV 215
++ L++ DD +L+ D++ ++ ++ + + FS
Sbjct: 840 SSDTLSRCDVDDLRSLVEDAREKDSWVTEEDFRRNFST 877
>gi|24660647|ref|NP_648177.1| CG7504, isoform C [Drosophila melanogaster]
gi|7295157|gb|AAF50482.1| CG7504, isoform C [Drosophila melanogaster]
Length = 1417
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 111/205 (54%), Gaps = 18/205 (8%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESHR 62
LS QYRMHP I +P+++FY+ +L ++E + P++ PY ++ + +S+
Sbjct: 1208 LSTQYRMHPEICRWPNQYFYEDQLINAECT------ARFASPLI-PYCVINLKYTCDSNG 1260
Query: 63 GGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNSE 122
+ S N +EA+F L + K + S + + G+I+PY+ Q L + +N
Sbjct: 1261 AQNKSISNNEEARFVAKLLTEMDKHMPS---KRFSYGLISPYQNQCYALSQVIPSHMN-- 1315
Query: 123 EGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGNAG 182
+ TVD++QG E+DVII+S R G GF+ + +R+NVALTR RR L + GN
Sbjct: 1316 ----ITPQTVDSYQGLEKDVIIISNART--RGCGFLTNYQRLNVALTRPRRCLVICGNFE 1369
Query: 183 ALTQSDDWAALIADSKARNCYMDMD 207
L + W L+ D++ R Y ++D
Sbjct: 1370 DLKSVEMWRNLLDDARKRKVYFNLD 1394
>gi|374339063|ref|YP_005095799.1| DNA helicase [Marinitoga piezophila KA3]
gi|372100597|gb|AEX84501.1| DNA helicase, putative [Marinitoga piezophila KA3]
Length = 649
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 76/206 (36%), Positives = 107/206 (51%), Gaps = 30/206 (14%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN---------LPDEVYYKDPVLRPYVFF 52
+L VQYRM+ I F ++ FY G L +++V N + DE + P VF
Sbjct: 449 ILKVQYRMNDKIMQFSNQKFYNGILRSADNVYNQTLTLDLSEVNDEKTKEILDTTPIVFV 508
Query: 53 DVIHGRES---HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLK 109
D E ++ GS S N EAK + L L++ V GIITPYK Q+K
Sbjct: 509 DTSANPERFEIYKKGSKSKYNPLEAKIVIELATILKEQ-------NVDFGIITPYKDQMK 561
Query: 110 CLQHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVAL 168
L+ E D Y+NTVD FQG+E DVII+S R+++ G +GF+ D RR+NVA+
Sbjct: 562 YLK----------EKTDFYVNTVDGFQGRENDVIILSLTRSNDEGTIGFLKDERRLNVAI 611
Query: 169 TRARRALWVMGNAGALTQSDDWAALI 194
TRAR+ L ++G+ L + LI
Sbjct: 612 TRARKKLIIIGDISTLKNYPLFDELI 637
>gi|149193893|ref|ZP_01870991.1| DNA helicase, UvrD/REP family protein [Caminibacter mediatlanticus
TB-2]
gi|149135846|gb|EDM24324.1| DNA helicase, UvrD/REP family protein [Caminibacter mediatlanticus
TB-2]
Length = 641
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 117/214 (54%), Gaps = 21/214 (9%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESV--INLPDEVYYKDPVL---RPYVFFDVIHG 57
L VQYRM+ I +FPS FY+ ++ E + I L D +D P VFFD G
Sbjct: 439 LEVQYRMNEKINNFPSCEFYECKVKTYEKIKNITLKDLGVNEDESFGGYTPIVFFDT-RG 497
Query: 58 R--ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHE- 114
+ E + S S N EA+F + L K L + +G+ITPYK HE
Sbjct: 498 KFLEETKKDSPSKYNPKEAEFVLSLC----KKLIENNAKQEFIGVITPYK------DHEE 547
Query: 115 -FRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRAR 172
+ ++ +E+ + + I +VD FQG+E+++II+S VRA+ +GF+ DIRR+NVA+TR +
Sbjct: 548 YIKKLMENEKIEGIEIKSVDGFQGREKEIIIVSLVRANEKENIGFLDDIRRLNVAITRPK 607
Query: 173 RALWVMGNAGALTQSDDWAALIADSKARNCYMDM 206
R L ++G+A L+ + + LI K Y+++
Sbjct: 608 RKLIIVGDAKTLSTNQTYQHLIDYVKKEGKYLEV 641
>gi|431898937|gb|ELK07307.1| Putative helicase senataxin [Pteropus alecto]
Length = 1923
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 113/207 (54%), Gaps = 21/207 (10%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQ-----GRLTDSESVINLPDEVYYKDPVLRPYVFFDVI 55
+ L+VQYRMHP I FPS + Y RLT++ + D + +PY+ FDV
Sbjct: 1500 LQLTVQYRMHPDICLFPSNYIYSRSLKTNRLTETIRCSS--------DWLFQPYLVFDVG 1551
Query: 56 HGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEF 115
G E R + SY NV E K + K + +GIIT YK Q +Q E
Sbjct: 1552 DGAE--RRDNDSYVNVQEIKL--VMEIIKLIKDKKKDVSFRNIGIITHYKAQKMMIQKEL 1607
Query: 116 RNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRAS--NHGVGFVADIRRMNVALTRARR 173
+ + + ++TVDAFQG+++D +I++CVRA+ +GF+A ++R+NV +TRA+
Sbjct: 1608 DKEFDGKGPAE--VDTVDAFQGRQKDCVIVTCVRANAMQGSIGFLASLQRLNVTITRAKY 1665
Query: 174 ALWVMGNAGALTQSDDWAALIADSKAR 200
+L+++G+ L ++ W LI D++ R
Sbjct: 1666 SLFILGHLRTLMENQHWNHLIQDAQKR 1692
>gi|328711753|ref|XP_001947351.2| PREDICTED: probable helicase senataxin-like [Acyrthosiphon pisum]
Length = 414
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 107/199 (53%), Gaps = 22/199 (11%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
+L+ QYRMH I FPS++FY+G + + SV K PY+ + H
Sbjct: 215 MLNTQYRMHKEICLFPSKYFYKGEIKTAPSV------KMRKQLSFHPYMILE--HESLQD 266
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
G V N+ EA V L + L + +TV ++TPY Q E N+L
Sbjct: 267 NTGEV---NIGEANMIVTLVDILLNS----ECRSLTVAVLTPYHKQ-----REQINILLK 314
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGNA 181
++ L +NT+D+FQG E DV+++S VR +GVGF+ DI R+NVALTRA+++L + GN
Sbjct: 315 KKKISLNVNTIDSFQGGECDVLLISTVRT--NGVGFMDDICRLNVALTRAKQSLIICGNF 372
Query: 182 GALTQSDDWAALIADSKAR 200
+L W+ LI D+K R
Sbjct: 373 MSLRGERVWSDLIEDAKER 391
>gi|123448689|ref|XP_001313071.1| possible regulator of nonsense transcripts [Trichomonas vaginalis
G3]
gi|121894941|gb|EAY00142.1| possible regulator of nonsense transcripts, putative [Trichomonas
vaginalis G3]
Length = 814
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 80/245 (32%), Positives = 127/245 (51%), Gaps = 28/245 (11%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY-YKDPVLR------PYVFFDV 54
+L+ QYRMHP I +FPS+ FY+ + +S I+ +Y + P + P +F+DV
Sbjct: 578 ILTYQYRMHPSILEFPSKTFYKNLV---KSGISAEQRIYKFSKPNFKFPNPQIPLMFWDV 634
Query: 55 IHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHE 114
G+E G SY + + + L + G+ ++GIITPY Q L
Sbjct: 635 -EGKEQSDGDGKSYWCLSQCN----AVSQVLDALFNSGVPANSIGIITPYNGQNDYLMDN 689
Query: 115 FRNVLNS---EEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTR 170
+ S E K++ I TVD FQG+E+D II + VR++ N+ +GF++DI R+NV++TR
Sbjct: 690 LDYICESCSAEYIKNVEIATVDGFQGREKDFIIFNLVRSNENYQIGFLSDIERLNVSITR 749
Query: 171 ARRALWVMGNAGALTQSD---DWAALIADSKARNCYM---DMDSLPKEFSVALAAKAPGY 224
A+ L V+G++ +++ DW ++ NC+M D SL K V K P
Sbjct: 750 AKYGLIVIGHSRTFSKTKLFCDWFNFFIEN---NCFMAGGDFKSLQKGTFVPNLDKDPKE 806
Query: 225 GPLQG 229
P +G
Sbjct: 807 APEEG 811
>gi|63054942|gb|AAY29009.1| dna2-nam7 helicase family protein [Pyrococcus sp. 304]
Length = 178
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 113/186 (60%), Gaps = 27/186 (14%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESV--INLPD---EVYYKDP---VLRP---YV 50
+L+VQYRM+ I +FPSR FYQG++ E V I L D +V KDP V+ P V
Sbjct: 5 MLTVQYRMNERIMEFPSREFYQGKIVADERVKGITLRDLGVDVELKDPWAEVINPENVVV 64
Query: 51 FFDV--IHGR-ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQ 107
F D I R E R GS S +N EAK + E ++K L++ G+ +G+ITPY Q
Sbjct: 65 FIDTSKIENRWERQRRGSESRENPLEAK---IVTEVVKKLLEA-GVKPEWIGVITPYDDQ 120
Query: 108 LKCLQHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNV 166
R++++ +++ + TVD +QG+E++VII+S VR++ G +GF+ D+RR+NV
Sbjct: 121 --------RDLISMSVPEEIEVKTVDGYQGREKEVIILSFVRSNRAGEIGFLKDLRRLNV 172
Query: 167 ALTRAR 172
+LTRAR
Sbjct: 173 SLTRAR 178
>gi|355718810|gb|AES06392.1| senataxin [Mustela putorius furo]
Length = 1702
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 112/206 (54%), Gaps = 11/206 (5%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
+ L+VQYRMHP I FPS + Y L S D +PY+ FDV G S
Sbjct: 1282 LQLTVQYRMHPDICLFPSSYVYNRSLKTSRQTET---SRCSSDWPFQPYLVFDVGDG--S 1336
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
R + SY NV E K + + + ++ + + +GIIT YK Q +Q + +
Sbjct: 1337 ERRDNDSYVNVQEIKLVMEIIKLIKDKRRDVTFR--NIGIITHYKAQKTMIQKDLDKEFD 1394
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASN--HGVGFVADIRRMNVALTRARRALWVM 178
+ + ++TVD FQG+++D +I++CVRA+ +GF+A ++R+NV +TRA+ +L+++
Sbjct: 1395 RKGPAE--VDTVDGFQGRQKDCVIVTCVRANTVQGSIGFLASLQRLNVTITRAKYSLFIL 1452
Query: 179 GNAGALTQSDDWAALIADSKARNCYM 204
G+ L ++ W LI D++ R +
Sbjct: 1453 GHLRTLMENQHWNHLIQDAQKRGAII 1478
>gi|406662219|ref|ZP_11070322.1| putative DNA helicase [Cecembia lonarensis LW9]
gi|405553902|gb|EKB49075.1| putative DNA helicase [Cecembia lonarensis LW9]
Length = 659
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 76/219 (34%), Positives = 121/219 (55%), Gaps = 30/219 (13%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYK---DPVLRPYVFFDVIHG- 57
+L +QYRM I F ++ FYQ L +++ E ++ +PVL F D
Sbjct: 446 MLQLQYRMPELIMGFSNKIFYQNELGAAKNT-----ESHFLSEGEPVLE---FIDTAGSG 497
Query: 58 -RESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKV-----TVGIITPYKLQLKCL 111
E+ S+S N +EA+F + ++L+ LK G+ K+ T+G+I PY+ Q++
Sbjct: 498 FVEAIEEESLSTFNQEEARFAL---QYLEDLLKRTGIAKIKEKRWTIGLIAPYRAQVRKF 554
Query: 112 Q------HEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRM 164
+ F N+ + E L I+++D FQGQERD+I++S VR++ G +GF+AD RRM
Sbjct: 555 NELLFESYAFPNLRSFPEL--LTIDSIDGFQGQERDIILISLVRSNAKGEIGFLADTRRM 612
Query: 165 NVALTRARRALWVMGNAGALTQSDDWAALIADSKARNCY 203
NVALTRA+R L V+G++ L+ + A + NCY
Sbjct: 613 NVALTRAKRKLVVIGDSATLSHHSFYNAFFDYVEENNCY 651
>gi|198467129|ref|XP_001354266.2| GA20398 [Drosophila pseudoobscura pseudoobscura]
gi|198149519|gb|EAL31319.2| GA20398 [Drosophila pseudoobscura pseudoobscura]
Length = 1841
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 113/205 (55%), Gaps = 18/205 (8%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESHR 62
L+ QYRMHP I +P+R+FY+ RL + + + +++ P++ PY ++ ++
Sbjct: 1625 LTTQYRMHPEICKWPNRYFYEDRLVNGQGL-----DMFLDSPLI-PYSVINLGFTSDTSD 1678
Query: 63 GGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTV-GIITPYKLQLKCLQHEFRNVLNS 121
+ S +N +EA+F L ++ L S KV + G+I+PY Q C H V+ S
Sbjct: 1679 PKTRSIKNEEEARFVAKLLAEMENHLPS----KVYLYGLISPYSSQ--C--HTLSQVIPS 1730
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGNA 181
K + +TVDA+QG E DVI++S R G GF+++ +R+NVA+TR RR L + GN
Sbjct: 1731 H-MKIMPPHTVDAYQGMESDVIVISNART--RGTGFLSNYQRLNVAVTRPRRCLIICGNF 1787
Query: 182 GALTQSDDWAALIADSKARNCYMDM 206
L W L+ D++ R Y D+
Sbjct: 1788 NDLQSVPMWKNLLGDARKRGVYFDL 1812
>gi|159476392|ref|XP_001696295.1| predicted protein [Chlamydomonas reinhardtii]
gi|158282520|gb|EDP08272.1| predicted protein [Chlamydomonas reinhardtii]
Length = 794
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 92/171 (53%), Gaps = 27/171 (15%)
Query: 40 YYKDPVLRPYVFFDVIHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVG 99
++ P P+ F+DV GRES G S N K G L++T +V
Sbjct: 581 WHSQPAFGPFAFYDV-AGRESTPPGGASIMN----KAG------LRRT--------ASVA 621
Query: 100 IITPYKLQLKCLQHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVR--------AS 151
+I+PYK Q+K L+ F+ L E + + INT+D FQG+E+D+ I S VR A
Sbjct: 622 VISPYKAQVKLLRDSFKTALGEEAARLVDINTIDGFQGREKDICIFSAVRSPPAPKKGAR 681
Query: 152 NHGVGFVADIRRMNVALTRARRALWVMGNAGALTQSDDWAALIADSKARNC 202
G+GFVAD RR+NV LTRAR +L V+GN AL WA LI + +R C
Sbjct: 682 RAGIGFVADERRINVGLTRARCSLIVIGNVRALQVDPHWANLIHSAISRRC 732
>gi|220931020|ref|YP_002507928.1| putative DNA helicase [Halothermothrix orenii H 168]
gi|219992330|gb|ACL68933.1| putative DNA helicase [Halothermothrix orenii H 168]
Length = 754
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/209 (35%), Positives = 115/209 (55%), Gaps = 28/209 (13%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-----LPDEVYYK--------DPVLRP 48
LL +QYRM+ I +F + HFY GRL + V N L E+ DP P
Sbjct: 546 LLEIQYRMNDLIMEFSNSHFYGGRLKSAPEVRNHTLRDLGIEISEGKCFTEKGFDPD-NP 604
Query: 49 YVFFDV--IHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKL 106
VF D + RE S SY N EA+ + L K +GL + + +ITPYK
Sbjct: 605 VVFLDTSNMEARERSLPNSDSYDNPVEAEIVLDLVGEALK----LGLEQRHIAVITPYKD 660
Query: 107 QLKCLQHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMN 165
Q+ L H R ++L INTVD FQG+E++V+++S VR++ H +GF+ D+RR+N
Sbjct: 661 QVDLLNHLSR-------FENLEINTVDGFQGREKEVVMISLVRSNKHRNIGFLRDLRRLN 713
Query: 166 VALTRARRALWVMGNAGALTQSDDWAALI 194
VA+TR +R L ++G++ ++ + +++L+
Sbjct: 714 VAITRPKRKLIIIGDSNTISGHEVYSSLV 742
>gi|224077408|ref|XP_002305249.1| predicted protein [Populus trichocarpa]
gi|222848213|gb|EEE85760.1| predicted protein [Populus trichocarpa]
Length = 1101
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/225 (34%), Positives = 117/225 (52%), Gaps = 10/225 (4%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLP-DEVYYKDPVLRPYVFFDVIHGRES 60
LL+VQYRMHP I FP+ FY ++ D+ V ++ + + + Y F +V +G E
Sbjct: 700 LLNVQYRMHPSISLFPNVEFYGKQILDAPLVKERSYEKCFLQGKMYGSYSFINVDYGHEE 759
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
S +NV E + L + SM ++VG+I+PY Q+ +Q + L+
Sbjct: 760 ADDRH-SRKNVVEVAVVSEIVAKLFEESVSMK-ETLSVGVISPYSAQVSAIQEKLGKTLS 817
Query: 121 --SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWV 177
S G + + +VD FQG E D+I++S VR G VGF+ +R NVALTRAR LW+
Sbjct: 818 RGSGNGFSVSVRSVDGFQGGEEDIIVISTVRCDLMGLVGFLKSPQRTNVALTRARYCLWI 877
Query: 178 MGNAGALTQSDD-WAALIADSKARNCYMDMD---SLPKEFSVALA 218
+GN L SD W ++ D+K R + + D SL + AL
Sbjct: 878 VGNGVTLGNSDSVWERMVIDAKTRGYFYNADEDESLAQAIIAALV 922
>gi|110637960|ref|YP_678167.1| DNA helicase [Cytophaga hutchinsonii ATCC 33406]
gi|110280641|gb|ABG58827.1| DNA helicase [Cytophaga hutchinsonii ATCC 33406]
Length = 611
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 114/205 (55%), Gaps = 17/205 (8%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHG--RE 59
+L++QYRM+ I FPS+ FY +L SV + + D V++ F D E
Sbjct: 413 MLAIQYRMNEKIMQFPSQWFYDNKLEAHGSV----KDHAFDDDVIQ---FIDTAGTGYEE 465
Query: 60 SHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVL 119
G +N EA + + ++ + K + ++GII+PYKLQ++ ++ + +
Sbjct: 466 ELVGAPFGIRNKQEADLVLAILNNVAELNK-----QASIGIISPYKLQIQYIREQL--IE 518
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRALWVM 178
K++ + TVD FQGQE+D+II+S VR++ +GF+ D+RRMNVA+TRAR+ L V+
Sbjct: 519 QKITSKNIQVQTVDGFQGQEKDIIIISLVRSNGKQEIGFLKDLRRMNVAITRARKKLIVI 578
Query: 179 GNAGALTQSDDWAALIADSKARNCY 203
G++ L+ S +A ++ N Y
Sbjct: 579 GDSSTLSSSKFYAGFQEYIESHNGY 603
>gi|344254581|gb|EGW10685.1| Uncharacterized protein FLJ44066 [Cricetulus griseus]
Length = 351
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 116/225 (51%), Gaps = 27/225 (12%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPV---LRPYVFFDVIHG 57
++L QYR HP I + FY+G L + S + PV L F++V
Sbjct: 120 VVLRTQYRCHPVISAIANDLFYEGNLMNGISETE-------RSPVVEWLPTLCFYNVTGA 172
Query: 58 RESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRN 117
+ R S +QNV EA F + L ++L + G+ +G+IT YK Q+ + H
Sbjct: 173 EQVERENS--FQNVAEAAFTL----KLIQSLIASGIAGSMIGVITLYKSQMYKICHLLSA 226
Query: 118 V-LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALW 176
+ N E K + ++TVDAFQG E+++II+SCVR VGF+ +RMNVALTR+RR L
Sbjct: 227 MDFNHPEAKAVQVSTVDAFQGAEKEIIILSCVRTRQ--VGFIDSEKRMNVALTRSRRHLL 284
Query: 177 VMGNAGALTQSDDWAALIADSKAR--------NCYMDMDSLPKEF 213
++G+ L ++ W +I + R +C +D L +++
Sbjct: 285 IVGSLSCLRKNRLWERVIQHCEGREDGLQHASHCEQQLDHLLRDY 329
>gi|326436499|gb|EGD82069.1| ATP-dependent helicase NAM7 [Salpingoeca sp. ATCC 50818]
Length = 1192
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/213 (34%), Positives = 114/213 (53%), Gaps = 20/213 (9%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTD-------SESVINLPDEVYYKDPVLRPYVFFDVI 55
L VQYRMHP + +FPS FY+G L + + ++ P + +P + P +F+ +
Sbjct: 816 LQVQYRMHPALSEFPSNTFYEGSLQNGVTAAEREQPAVDFP----WPNPEV-PMLFYASM 870
Query: 56 HGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQ-LKCLQH- 113
GRE SY N EA E + G+ +GIITPY+ Q +Q+
Sbjct: 871 -GREEMAASGSSYLNRTEAAN----VEKIVTRFMRAGITPDQIGIITPYEGQRAHIVQYM 925
Query: 114 EFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRAR 172
F + L + +VD+FQG+E+D II+SC R+++H G+GF+ D RR+NVALTRA+
Sbjct: 926 NFHGAARRSFYEALEVASVDSFQGREKDYIILSCTRSNDHQGIGFLNDPRRLNVALTRAK 985
Query: 173 RALWVMGNAGALTQSDDWAALIADSKARNCYMD 205
L ++GN AL++ W L+ K + ++
Sbjct: 986 YGLILVGNPRALSKQALWHNLLLHFKEQGVLVE 1018
>gi|222445377|ref|ZP_03607892.1| hypothetical protein METSMIALI_01005 [Methanobrevibacter smithii
DSM 2375]
gi|222434942|gb|EEE42107.1| putative DNA helicase [Methanobrevibacter smithii DSM 2375]
Length = 658
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 110/214 (51%), Gaps = 36/214 (16%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESV--INLPDEVYYKDPV-------------- 45
LL+VQYRM+ + FP+ FY G L SV INL DE+ + +
Sbjct: 445 LLNVQYRMNSFLMKFPNSEFYNGNLKSDSSVDDINL-DEIIDLEELSRLKESDVEKQLHN 503
Query: 46 -LRPYVFFD---VIHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGII 101
L+P +F D + + E H S S N EA + + T G+ +GII
Sbjct: 504 NLKPLLFIDTSNLKNNEEKHLKDSKSIINQSEADIATSIAKFYLGT----GINPKDIGII 559
Query: 102 TPYKLQLKCLQHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVAD 160
+PY Q+ +Q + + + +VD FQG+E+++II+S VR++ N +GF+ D
Sbjct: 560 SPYADQVNLIQDKI----------PIEVKSVDGFQGREKEIIIISTVRSNKNKDIGFLKD 609
Query: 161 IRRMNVALTRARRALWVMGNAGALTQSDDWAALI 194
+RR+NVA+TRA+R L V+GN L + ++ LI
Sbjct: 610 LRRLNVAITRAKRKLIVIGNKNTLKGNSTYSKLI 643
>gi|374384247|ref|ZP_09641773.1| putative DNA helicase [Odoribacter laneus YIT 12061]
gi|373228854|gb|EHP51157.1| putative DNA helicase [Odoribacter laneus YIT 12061]
Length = 645
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/196 (38%), Positives = 109/196 (55%), Gaps = 7/196 (3%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL +QYRMH I FPSR FY L + V + + Y P++ + E
Sbjct: 427 LLQIQYRMHEDIMHFPSRWFYHNCLQAAPEV-RFRNILEYDSPIV--WCDTQAYDSSEET 483
Query: 62 RGGSVSYQNVDEAKFGVCLY-EHLQKTLKSMGLG-KVTVGIITPYKLQLKCLQHEFR-NV 118
G S+S+ N EA + E++QK ++ L ++ G+I+PYK Q++ ++ R N
Sbjct: 484 AGESLSHLNRTEALLLLQQLQEYIQKIGETRILDEQIDFGLISPYKAQVRYIRQLMRKNP 543
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWV 177
+ + INTVD FQGQERDVI +S VRA+ G +GF+ D+RRMNVA+TRAR L +
Sbjct: 544 FFKPFSRLISINTVDGFQGQERDVIFISLVRANEAGNIGFLQDLRRMNVAITRARMKLIL 603
Query: 178 MGNAGALTQSDDWAAL 193
+G+A L + AL
Sbjct: 604 LGDALTLLHHPFYKAL 619
>gi|408674036|ref|YP_006873784.1| AAA ATPase [Emticicia oligotrophica DSM 17448]
gi|387855660|gb|AFK03757.1| AAA ATPase [Emticicia oligotrophica DSM 17448]
Length = 634
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 111/213 (52%), Gaps = 23/213 (10%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL QYRM+ I S+ FY +L SV + + D +P F D
Sbjct: 427 LLEEQYRMNEQIMAHSSKVFYNNQLKAHASV---AKQTLFVDE--KPLHFIDTAGCSFDE 481
Query: 62 RGGSVSYQNVDEAKFGVC----LYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH---- 113
+ S N DEA F V E L+K + ++ +I+PYK Q+ L+
Sbjct: 482 KLEGTSSTNPDEAAFLVKHLNGFVEELKKKFSTANFP--SIAVISPYKQQISILKEQVEH 539
Query: 114 --EFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTR 170
E + VLN ++ +NT+D+FQGQERD++ +S R++ G +GF++DIRRMNVA+TR
Sbjct: 540 APELKEVLN-----NISVNTIDSFQGQERDIVYISLTRSNAEGAIGFLSDIRRMNVAMTR 594
Query: 171 ARRALWVMGNAGALTQSDDWAALIADSKARNCY 203
AR+ L V+G++ L+ S+ + I+ ++ Y
Sbjct: 595 ARKKLIVIGDSATLSSSNFYEEFISYTQEIEAY 627
>gi|426232114|ref|XP_004010079.1| PREDICTED: uncharacterized protein LOC101118531 [Ovis aries]
Length = 2104
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/224 (33%), Positives = 113/224 (50%), Gaps = 25/224 (11%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLR--PYVFFDVIHGR 58
+LL QYR HP I + FY+G L + S + P+L P + F + G
Sbjct: 1865 ILLRTQYRCHPTISAIANDLFYEGNLMNGISETE-------RSPLLEWLPTLCFYNVKGL 1917
Query: 59 ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV 118
E G+ S+ NV EA F + L + +L + G+ +G+IT YK Q+ L H
Sbjct: 1918 EQIERGN-SFHNVAEAAFTLKLIQ----SLIASGIAGSMIGVITLYKSQMYKLCHLLSAA 1972
Query: 119 -LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWV 177
+ K + ++TVDAFQG E+++II+SCVR VGF+ +RMNVALTR RR L +
Sbjct: 1973 DFDHPNVKAVQVSTVDAFQGAEKEIIILSCVRT--RQVGFIDSEKRMNVALTRGRRHLLI 2030
Query: 178 MGNAGALTQSDDWAALIADSKAR--------NCYMDMDSLPKEF 213
+GN L ++ W +I + R C +D L K++
Sbjct: 2031 VGNLACLRKNRLWGRVIQHCEGREGGLQHASQCEPQLDLLLKDY 2074
>gi|294929939|ref|XP_002779430.1| nonsense-mediated mRNA decay protein, putative [Perkinsus marinus
ATCC 50983]
gi|239888538|gb|EER11225.1| nonsense-mediated mRNA decay protein, putative [Perkinsus marinus
ATCC 50983]
Length = 923
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 104/192 (54%), Gaps = 14/192 (7%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDE----VYYKDPVLRPYVFFDVIHGR 58
L VQYRMHP + +FPS+ FY G L + I + D V + P +FF G+
Sbjct: 689 LEVQYRMHPSLAEFPSQTFYDGCLQNG---ITMEDRQVSGVKFPWPREEMPMFFYNSTGQ 745
Query: 59 ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFR-- 116
E SY N EA E + GL +G++TPY+ Q +Q +
Sbjct: 746 EEISASGTSYLNRSEA----INIEKIITYFLRAGLKGSQIGVVTPYEGQRAYIQQVLQRQ 801
Query: 117 NVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRAL 175
L+++ + + I +VDAFQG+E+D I++SCVR++ G+GF+ D RR+NVALTRAR L
Sbjct: 802 TTLSAKMYESIEIASVDAFQGREKDFIVLSCVRSNQRAGLGFLNDPRRLNVALTRARYGL 861
Query: 176 WVMGNAGALTQS 187
+ GNA L ++
Sbjct: 862 VICGNAQVLARA 873
>gi|183230332|ref|XP_654283.2| regulator of nonsense transcripts [Entamoeba histolytica HM-1:IMSS]
gi|169802981|gb|EAL48897.2| regulator of nonsense transcripts, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 965
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 110/215 (51%), Gaps = 30/215 (13%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSES--------VINL-PDEVYYKDPVLRPYVFF 52
+L QYRMHP I +F ++ FY +L + S +IN PD Y +P++ F
Sbjct: 713 MLKTQYRMHPAISEFSNKMFYSSKLENGVSSKDRFDNRIINFFPD---YTNPIM-----F 764
Query: 53 DVIHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQ 112
G E + SY N E + + E ++K L + + + +GII+PY+ Q
Sbjct: 765 INCDGTEQYGSSGTSYNNAGEVQI---IQEVVEKLLNN-DIEENEIGIISPYQAQ----- 815
Query: 113 HEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRA 171
+ +++ + + +D FQG E++ II SCVR++ GVGFV D +R+NVALTRA
Sbjct: 816 ---QELISQYVSTKIKVANIDGFQGNEKEYIIFSCVRSNQTLGVGFVNDYKRLNVALTRA 872
Query: 172 RRALWVMGNAGALTQSDDWAALIADSKARNCYMDM 206
+R L ++GN L S W LI R+ ++
Sbjct: 873 KRGLIIIGNIPTLVTSKVWNMLIHQFYLRDALFEL 907
>gi|307109973|gb|EFN58210.1| hypothetical protein CHLNCDRAFT_142077 [Chlorella variabilis]
Length = 442
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/199 (40%), Positives = 108/199 (54%), Gaps = 17/199 (8%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
+LL QYRMHP I FP+ FY GRL S + PV F +V GRES
Sbjct: 249 LLLDTQYRMHPAIASFPNSTFYGGRLRSSPTTGASTPPPPLPAPV----TFINVADGRES 304
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHL----QKTLKSMGLGKVTVGIITPYKLQLKCLQHEFR 116
GS Y N EA V L L + +G +G++TPY+ Q + L+ +
Sbjct: 305 L--GSSKY-NAREADAVVGLLRQLLGRRSGSSDCGTVGGADIGVVTPYRAQAEQLRRRTQ 361
Query: 117 NVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRA-SNHGVGFVADIRRMNVALTRARRAL 175
+ +L I+TVDAFQG+E++VII+S VRA S +GFV+D RR+NVALTRA RA+
Sbjct: 362 QLW-----PELEISTVDAFQGREKEVIIISPVRANSCERLGFVSDRRRLNVALTRAMRAV 416
Query: 176 WVMGNAGALTQSDDWAALI 194
V+G+ L+ S W + I
Sbjct: 417 VVVGHRETLSTSPLWRSWI 435
>gi|410099466|ref|ZP_11294437.1| hypothetical protein HMPREF1076_03615 [Parabacteroides goldsteinii
CL02T12C30]
gi|409218937|gb|EKN11903.1| hypothetical protein HMPREF1076_03615 [Parabacteroides goldsteinii
CL02T12C30]
Length = 647
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/196 (39%), Positives = 108/196 (55%), Gaps = 21/196 (10%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVL--RPYVFFDVIHG-- 57
LL VQYRMH I F SR FYQ L + EV Y+ + P V+FD
Sbjct: 429 LLKVQYRMHEDIMRFSSRWFYQDELQAAP-------EVKYRGILAYDTPVVWFDTADCDF 481
Query: 58 RESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVT-----VGIITPYKLQLKCLQ 112
E S S N EA+ L E LQ ++ + +V G+I+PYK Q++ ++
Sbjct: 482 EEDQLSESQSRINKKEAEL---LVEQLQAYIEKISKERVLDESIDFGLISPYKSQVQYIR 538
Query: 113 HEF-RNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTR 170
RN K + ++TVD FQGQERDVI++S VRA++ G +GF+ D+RRMNVA+TR
Sbjct: 539 GLIKRNSFFKPFRKLITVHTVDGFQGQERDVIMISLVRANDQGNIGFLNDLRRMNVAITR 598
Query: 171 ARRALWVMGNAGALTQ 186
AR L ++G+A LT+
Sbjct: 599 ARMKLIILGDASTLTK 614
>gi|297475614|ref|XP_002688121.1| PREDICTED: uncharacterized protein LOC539572 [Bos taurus]
gi|296486778|tpg|DAA28891.1| TPA: prematurely terminated mRNA decay factor-like [Bos taurus]
Length = 2116
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 107/203 (52%), Gaps = 17/203 (8%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLR--PYVFFDVIHGR 58
+LL QYR HP I + FY+G L + S + P+L P + F + G
Sbjct: 1877 ILLRTQYRCHPTISAIANDLFYEGNLMNGISETE-------RSPLLEWLPTLCFYNVKGL 1929
Query: 59 ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV 118
E G+ S+ NV EA F + L + +L + G+ +G+IT YK Q+ L H +
Sbjct: 1930 EQIERGN-SFHNVAEAAFTLKLIQ----SLIASGIAGSMIGVITLYKSQMYKLCHLLSAM 1984
Query: 119 -LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWV 177
+ K + ++TVDAFQG E+++II+SCVR VGF+ +RMNVALTR RR L +
Sbjct: 1985 DFDHPNLKAVQVSTVDAFQGAEKEIIILSCVRT--RQVGFIDSEKRMNVALTRGRRHLLI 2042
Query: 178 MGNAGALTQSDDWAALIADSKAR 200
+GN L ++ W +I + R
Sbjct: 2043 VGNLACLRKNRLWGRVIQHCEGR 2065
>gi|300727419|ref|ZP_07060828.1| DNA helicase [Prevotella bryantii B14]
gi|299775299|gb|EFI71898.1| DNA helicase [Prevotella bryantii B14]
Length = 614
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 112/194 (57%), Gaps = 10/194 (5%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVL-----RPYVFFDVIH 56
LL VQYRM+ I F S +FY G + ++ I + Y+DP++ V D
Sbjct: 405 LLKVQYRMNEQIMQFSSNYFYHGEV-ETAPQIKYRGILDYEDPMMWIDTSEIEVGPDEPS 463
Query: 57 GRESHRGGSVSYQNVDEAKFGV-CLYEHLQKTLKSMGLGK-VTVGIITPYKLQLKCLQHE 114
+E G + N EA+ + L E+ QK K+ L + + VGII+PY+ Q++ L+
Sbjct: 464 FKEQFIGENFGRVNKGEAELTLRTLEEYFQKIGKTRILDENIDVGIISPYRAQVQYLKKL 523
Query: 115 FRN-VLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRAR 172
R K + +NTVD FQGQERD+I++S VRA++ G +GF+ D+RRMNVA+TRAR
Sbjct: 524 IRKREFFKPYRKFISVNTVDGFQGQERDIILISMVRANDDGQIGFLNDLRRMNVAITRAR 583
Query: 173 RALWVMGNAGALTQ 186
L ++GNA +++
Sbjct: 584 MKLIILGNAQTMSK 597
>gi|431899634|gb|ELK07588.1| hypothetical protein PAL_GLEAN10013843 [Pteropus alecto]
Length = 1445
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/224 (34%), Positives = 114/224 (50%), Gaps = 25/224 (11%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLR--PYVFFDVIHGR 58
+LL QYR HP I + FY G L + S + + P+L P + F + G
Sbjct: 829 VLLRTQYRCHPAISAVANDLFYGGVLVNGVSEAD-------RAPLLAWLPTLCFYSVRGL 881
Query: 59 ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV 118
E G + S+ NV EA F + L + + + G+ VG+IT Y+ Q+ L H R+
Sbjct: 882 EQTEGDN-SFHNVAEAAFTL----KLIRAVLASGVPGSAVGVITLYRAQMCKLCHLLRDA 936
Query: 119 -LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWV 177
+S E K + ++TVDAFQG E+++II+SCVR VGF+ +RMNVALTR RR L +
Sbjct: 937 DSDSPEVKAVQVSTVDAFQGAEKEIIILSCVRTRQ--VGFIDSEKRMNVALTRGRRHLLI 994
Query: 178 MGNAGALTQSDDWAALIADSKAR--------NCYMDMDSLPKEF 213
+G+ L S W +I R C +D L K++
Sbjct: 995 VGHLACLRGSRLWGRVIQHCAGREDGLQHASQCEPQLDLLLKDY 1038
>gi|194667596|ref|XP_588126.4| PREDICTED: uncharacterized protein LOC539572 [Bos taurus]
Length = 2116
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 107/203 (52%), Gaps = 17/203 (8%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLR--PYVFFDVIHGR 58
+LL QYR HP I + FY+G L + S + P+L P + F + G
Sbjct: 1877 ILLRTQYRCHPTISAIANDLFYEGNLMNGISETE-------RSPLLEWLPTLCFYNVKGL 1929
Query: 59 ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV 118
E G+ S+ NV EA F + L + +L + G+ +G+IT YK Q+ L H +
Sbjct: 1930 EQIERGN-SFHNVAEAAFTLKLIQ----SLIASGIAGSMIGVITLYKSQMYKLCHLLSAM 1984
Query: 119 -LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWV 177
+ K + ++TVDAFQG E+++II+SCVR VGF+ +RMNVALTR RR L +
Sbjct: 1985 DFDHPNLKAVQVSTVDAFQGAEKEIIILSCVRT--RQVGFIDSEKRMNVALTRGRRHLLI 2042
Query: 178 MGNAGALTQSDDWAALIADSKAR 200
+GN L ++ W +I + R
Sbjct: 2043 VGNLACLRKNRLWGRVIQHCEGR 2065
>gi|300176550|emb|CBK24215.2| unnamed protein product [Blastocystis hominis]
Length = 939
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 109/209 (52%), Gaps = 6/209 (2%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESHR 62
L++QYRMHP + FPS FY G L ++ + + P + F + G E
Sbjct: 647 LNIQYRMHPALSIFPSNMFYNGALKNAVHSSERTRNLAFPWPRSDMPMMFWCVQGSEDPG 706
Query: 63 GGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEF-RNVLNS 121
S+ N EA C+ E + + + G+ +G+ITPY Q L+ R++ +
Sbjct: 707 SSGRSFLNRMEA---TCV-EKVVERFINCGIPGDRIGVITPYDSQRTLLRQVLSRHMEKA 762
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASNHGV-GFVADIRRMNVALTRARRALWVMGN 180
EE K + I +VD FQG+E D II SCVR+++ GV GF+ D+RR+NVA+TRA+ + ++GN
Sbjct: 763 EEVKKVEIASVDEFQGRENDYIIFSCVRSNSDGVLGFLNDMRRLNVAITRAKYGIVIIGN 822
Query: 181 AGALTQSDDWAALIADSKARNCYMDMDSL 209
L W L+ + C + SL
Sbjct: 823 PNTLRSHPIWVELMNHFQMNKCLVCGASL 851
>gi|114627310|ref|XP_520331.2| PREDICTED: probable helicase senataxin isoform 8 [Pan troglodytes]
gi|410339883|gb|JAA38888.1| senataxin [Pan troglodytes]
Length = 2668
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 110/202 (54%), Gaps = 11/202 (5%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
+ L+VQYRMHP I FPS + Y L + + D +PY+ FDV G S
Sbjct: 2243 LQLTVQYRMHPDICLFPSNYVYNRNLKTNRQTEAI---RCSSDWPFQPYLVFDV--GDGS 2297
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
R + SY NV E K + K + +GIIT YK Q +Q + +
Sbjct: 2298 ERRDNDSYINVQEIKL--VMEIIKLIKDKKKDVSFRNIGIITHYKAQKTMIQKDLDKEFD 2355
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNH--GVGFVADIRRMNVALTRARRALWVM 178
+ + ++TVDAFQG+++D +I++CVRA++ +GF+A ++R+NV +TRA+ +L+++
Sbjct: 2356 RKGPAE--VDTVDAFQGRQKDCVIVTCVRANSMQGSIGFLASLQRLNVTITRAKYSLFIL 2413
Query: 179 GNAGALTQSDDWAALIADSKAR 200
G+ L ++ W LI D++ R
Sbjct: 2414 GHLRTLMENQHWNQLIQDAQKR 2435
>gi|217076667|ref|YP_002334383.1| DNA helicase [Thermosipho africanus TCF52B]
gi|217036520|gb|ACJ75042.1| DNA helicase, putative [Thermosipho africanus TCF52B]
Length = 639
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 111/211 (52%), Gaps = 21/211 (9%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYY-KDPVLRP---YVFFDVIHG 57
LL++QYRM+ I +FP++ FY G+L I L D + D + +P +F D
Sbjct: 441 LLNIQYRMNEKIMEFPNKEFYNGKLKSGIGNITLKDLGFEGSDEITKPENTIIFIDTKSR 500
Query: 58 R---ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHE 114
+ E+ + S SY N EA + E K +GL + +G+ITPY Q+ ++
Sbjct: 501 KNKTENQKKDSTSYFNELEANIVKDIVEKFLK----LGLNREYIGVITPYDDQVDLIKSF 556
Query: 115 FRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARR 173
V +NTVD FQG+E++VII+S VR++ +GF+ D+RR+NV++TRA+R
Sbjct: 557 NLGV---------EVNTVDGFQGREKEVIIISFVRSNQRKELGFLTDLRRLNVSITRAKR 607
Query: 174 ALWVMGNAGALTQSDDWAALIADSKARNCYM 204
L +G++ L + I K + Y+
Sbjct: 608 KLICIGDSSTLENHPTYKKFIEFVKNKGVYL 638
>gi|261350062|ref|ZP_05975479.1| putative DNA helicase [Methanobrevibacter smithii DSM 2374]
gi|288860848|gb|EFC93146.1| putative DNA helicase [Methanobrevibacter smithii DSM 2374]
Length = 658
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 110/214 (51%), Gaps = 36/214 (16%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESV--INLPDEVYYKDPV-------------- 45
LL+VQYRM+ + FP+ FY G L SV INL DE+ + +
Sbjct: 445 LLNVQYRMNSFLMKFPNLEFYNGNLKSDSSVDNINL-DEIIDLEELSRLKESDVEKQLHN 503
Query: 46 -LRPYVFFD---VIHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGII 101
L+P +F D + + E H S S N EA + + T G+ +GII
Sbjct: 504 NLKPLLFIDTSNLKNNEEKHLKDSKSIINQSEADIATSIAKFYLGT----GINPKDIGII 559
Query: 102 TPYKLQLKCLQHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVAD 160
+PY Q+ +Q + + + +VD FQG+E+++II+S VR++ N +GF+ D
Sbjct: 560 SPYADQVNLIQDKI----------PIEVKSVDGFQGREKEIIIISTVRSNKNKDIGFLKD 609
Query: 161 IRRMNVALTRARRALWVMGNAGALTQSDDWAALI 194
+RR+NVA+TRA+R L V+GN L + ++ LI
Sbjct: 610 LRRLNVAITRAKRKLIVIGNKNTLKGNSTYSKLI 643
>gi|397503688|ref|XP_003822451.1| PREDICTED: probable helicase senataxin [Pan paniscus]
Length = 2669
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 110/202 (54%), Gaps = 11/202 (5%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
+ L+VQYRMHP I FPS + Y L + + D +PY+ FDV G S
Sbjct: 2244 LQLTVQYRMHPDICLFPSNYVYNRNLKTNRQTEAI---RCSSDWPFQPYLVFDV--GDGS 2298
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
R + SY NV E K + K + +GIIT YK Q +Q + +
Sbjct: 2299 ERRDNDSYINVQEIKL--VMEIIKLIKDKKKDVSFRNIGIITHYKAQKTMIQKDLDKEFD 2356
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNH--GVGFVADIRRMNVALTRARRALWVM 178
+ + ++TVDAFQG+++D +I++CVRA++ +GF+A ++R+NV +TRA+ +L+++
Sbjct: 2357 RKGPAE--VDTVDAFQGRQKDCVIVTCVRANSMQGSIGFLASLQRLNVTITRAKYSLFIL 2414
Query: 179 GNAGALTQSDDWAALIADSKAR 200
G+ L ++ W LI D++ R
Sbjct: 2415 GHLRTLMENQHWNQLIQDAQKR 2436
>gi|63054946|gb|AAY29011.1| dna2-nam7 helicase family protein [Pyrococcus sp. 321]
Length = 179
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 113/186 (60%), Gaps = 27/186 (14%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESV--INLPD---EVYYKDP---VLRP---YV 50
+L+VQYRM+ I +FPSR FYQG++ E V I L D +V KDP V+ P V
Sbjct: 5 MLTVQYRMNERIMEFPSREFYQGKIVADERVKGITLRDLGVDVELKDPWAEVINPENVVV 64
Query: 51 FFDV--IHGR-ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQ 107
F D I R E R GS S +N EAK + E ++K L++ G+ +G+ITPY Q
Sbjct: 65 FIDTSKIENRWERQRRGSESRENPLEAK---IVTEVVKKLLEA-GVKPEWIGVITPYDDQ 120
Query: 108 LKCLQHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNV 166
R++++ +++ + TVD +QG+E++VII+S VR++ G +GF+ D+RR+NV
Sbjct: 121 --------RDLISMSVPEEIEVKTVDGYQGREKEVIILSFVRSNRAGEIGFLKDLRRLNV 172
Query: 167 ALTRAR 172
+LTRA+
Sbjct: 173 SLTRAK 178
>gi|307194974|gb|EFN77064.1| Probable helicase senataxin [Harpegnathos saltator]
Length = 1415
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 118/220 (53%), Gaps = 33/220 (15%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTD-SESVINLPDEVYYKDPVLRPYVFFDVIHGRE 59
++L QYRM I +P+R+FY +L + +E I+ P PY +
Sbjct: 1204 IMLDTQYRMAYSISYWPNRYFYDCKLKNATELRISFP---------FHPYRVLSHNSVQN 1254
Query: 60 SHRGGSVSYQNVDEAKF------GVCLYEHLQKTLKSMGLGKVTVGIITPYKLQ----LK 109
+ R + N EA+F + +Y + T + VT+G++TPY Q L
Sbjct: 1255 NDR-----FSNTTEAEFVSNMIYAMLIYAKWEDTNEP-----VTLGVLTPYNNQRTVVLN 1304
Query: 110 CLQHEFRNVLNSEEGKDLY-INTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVAL 168
+ + N+ + K Y +NTVD+FQGQERD+IIMSCVR+ HG+GF++D +R+ VAL
Sbjct: 1305 KINEKISNLPENMRKKIAYEVNTVDSFQGQERDIIIMSCVRS--HGIGFMSDKQRLCVAL 1362
Query: 169 TRARRALWVMGNAGALTQSDDWAALIADSKARNCYMDMDS 208
TRA+ +L + GN + W +L++D+++R ++D+
Sbjct: 1363 TRAKHSLILCGNFNTFMKDQMWNSLLSDARSRGVLCNVDA 1402
>gi|440898219|gb|ELR49762.1| hypothetical protein M91_07236, partial [Bos grunniens mutus]
Length = 1039
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 107/203 (52%), Gaps = 17/203 (8%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLR--PYVFFDVIHGR 58
+LL QYR HP I + FY+G L + S + P+L P + F + G
Sbjct: 809 ILLRTQYRCHPTISAIANDLFYEGNLMNGISETE-------RSPLLEWLPTLCFYNVKGL 861
Query: 59 ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV 118
E G+ S+ NV EA F + L ++L + G+ +G+IT YK Q+ L H +
Sbjct: 862 EQIERGN-SFHNVAEAAFTL----KLIQSLIASGIAGSMIGVITLYKSQMYKLCHLLSAM 916
Query: 119 -LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWV 177
+ K + ++TVDAFQG E+++II+SCVR VGF+ +RMNVALTR RR L +
Sbjct: 917 DFDHPNLKAVQVSTVDAFQGAEKEIIILSCVRTRQ--VGFIDSEKRMNVALTRGRRHLLI 974
Query: 178 MGNAGALTQSDDWAALIADSKAR 200
+GN L ++ W +I + R
Sbjct: 975 VGNLACLRKNRLWGRVIQHCEGR 997
>gi|222099668|ref|YP_002534236.1| DNA helicase [Thermotoga neapolitana DSM 4359]
gi|221572058|gb|ACM22870.1| DNA helicase [Thermotoga neapolitana DSM 4359]
Length = 650
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/221 (33%), Positives = 123/221 (55%), Gaps = 30/221 (13%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINL---------PDEVYYKDPVLRP--- 48
+LL QYRM+ + +FPSR FY G+L +SV N+ P+ D +L P
Sbjct: 441 VLLDTQYRMNEILMEFPSREFYDGKLKADDSVKNITLLDLGVESPNFDKLWDVILSPKNV 500
Query: 49 YVFFDVIHGR----ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPY 104
VF D R E R S S +N EA+ L + + + L SMG+ + +G+ITPY
Sbjct: 501 LVFVDT-RNRPDRFERQRKDSPSRENPLEAR----LVKEIVEKLISMGVKEEWIGVITPY 555
Query: 105 KLQLKCLQHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRR 163
Q+ + R +L + + +++VD FQG+E++VII+S VR++ +G +GF+ D+RR
Sbjct: 556 DDQVDLV----RTLLEEK----VEVHSVDGFQGREKEVIIISFVRSNKNGEIGFLEDLRR 607
Query: 164 MNVALTRARRALWVMGNAGALTQSDDWAALIADSKARNCYM 204
+NV+LTRA+R L +G++ L+ + + ++ + Y+
Sbjct: 608 LNVSLTRAKRKLIAIGDSSTLSVHPTYRRFVEFARKKGTYV 648
>gi|392964636|ref|ZP_10330056.1| AAA ATPase [Fibrisoma limi BUZ 3]
gi|387846019|emb|CCH52102.1| AAA ATPase [Fibrisoma limi BUZ 3]
Length = 632
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 111/209 (53%), Gaps = 15/209 (7%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL QYRMH HI + S FY+ +L SV ++ D L VF D
Sbjct: 425 LLDEQYRMHEHIMGYSSEVFYEKKLKAHASVAR--HTLFDGDTSL---VFVDTAGCGFDE 479
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGL-----GKVTVGIITPYKLQLKCLQHEFR 116
+ S N DEA L +HL + + + T+ +I+PYK Q+ L+ +
Sbjct: 480 KLDGTSSTNPDEAAL---LVKHLTQLVADLSTYYKPQDFPTIAVISPYKQQIAILKEQIA 536
Query: 117 NVLNSEE-GKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRA 174
N + + +NT+D+FQGQERD++ +S VR++ G +GF+ADIRRMNVA+TRAR+
Sbjct: 537 NTPELQPYSHVISVNTIDSFQGQERDIVYISMVRSNADGDIGFLADIRRMNVAMTRARKK 596
Query: 175 LWVMGNAGALTQSDDWAALIADSKARNCY 203
L ++G++ L +A IA ++A + Y
Sbjct: 597 LVIVGDSATLAGLPFYADFIAYAEALDTY 625
>gi|265755988|ref|ZP_06090455.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|423242331|ref|ZP_17223440.1| hypothetical protein HMPREF1065_04063 [Bacteroides dorei
CL03T12C01]
gi|263234066|gb|EEZ19667.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|392639617|gb|EIY33433.1| hypothetical protein HMPREF1065_04063 [Bacteroides dorei
CL03T12C01]
Length = 630
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 106/189 (56%), Gaps = 7/189 (3%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL VQYRM+ I F S FYQG L + V + Y P+ +V + ++ E
Sbjct: 429 LLKVQYRMNDEIMHFSSEWFYQGELKSAPEV-KYRGILDYDTPI--EWVNTEGMNCNEEF 485
Query: 62 RGGSVSYQNVDEAKFGVC-LYEHLQKTLKSMGLG-KVTVGIITPYKLQLKCLQHEF-RNV 118
G S N EA + L ++ K K L ++ VG+I+PYK Q++ L+ R+
Sbjct: 486 VGESFGRINKAEAALSISQLTHYINKIGKERFLEERIDVGLISPYKAQVQYLRQLIKRDA 545
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWV 177
+ INTVD FQGQERDVI++S VRA+ G +GF+ D+RRMNVA+TRAR L +
Sbjct: 546 FFKPYRHLITINTVDGFQGQERDVILISLVRANEDGQIGFLNDLRRMNVAITRARMKLII 605
Query: 178 MGNAGALTQ 186
+G+A LT+
Sbjct: 606 LGDASTLTK 614
>gi|212693586|ref|ZP_03301714.1| hypothetical protein BACDOR_03103 [Bacteroides dorei DSM 17855]
gi|212663839|gb|EEB24413.1| putative DNA helicase [Bacteroides dorei DSM 17855]
Length = 630
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 106/189 (56%), Gaps = 7/189 (3%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL VQYRM+ I F S FYQG L + V + Y P+ +V + ++ E
Sbjct: 429 LLKVQYRMNDEIMHFSSEWFYQGELKSAPEV-KYRGILDYDTPI--EWVNTEGMNCNEEF 485
Query: 62 RGGSVSYQNVDEAKFGVC-LYEHLQKTLKSMGLG-KVTVGIITPYKLQLKCLQHEF-RNV 118
G S N EA + L ++ K K L ++ VG+I+PYK Q++ L+ R+
Sbjct: 486 VGESFGRINKAEAALSISQLTHYINKIGKERFLEERIDVGLISPYKAQVQYLRQLIKRDA 545
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWV 177
+ INTVD FQGQERDVI++S VRA+ G +GF+ D+RRMNVA+TRAR L +
Sbjct: 546 FFKPYRHLITINTVDGFQGQERDVILISLVRANEDGQIGFLNDLRRMNVAITRARMKLII 605
Query: 178 MGNAGALTQ 186
+G+A LT+
Sbjct: 606 LGDASTLTK 614
>gi|409099302|ref|ZP_11219326.1| ATPase AAA [Pedobacter agri PB92]
Length = 637
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 115/208 (55%), Gaps = 11/208 (5%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
+LL+ QYRMH I + S+ FY +L +V + + D P F D
Sbjct: 427 VLLNEQYRMHESIMGYSSQVFYNSQLHAHHAVAR---HLVFADD--EPLAFIDTAGCSFD 481
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMG--LGKVTVGIITPYKLQLKCLQH--EFR 116
+ S N DEA F V L + L+S + ++ I++PYK Q++ ++ E
Sbjct: 482 EKLDGTSTTNPDEATFLVTHLSALIQELESKETIVDFPSIAIVSPYKQQVQIVKMLVEEN 541
Query: 117 NVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRAL 175
+L + + K + +NT+D+FQGQERDV+ +S R++ G +GF+AD RRMNVA+TRAR+ L
Sbjct: 542 ELLMAHQDK-ISVNTIDSFQGQERDVVYISLTRSNADGSIGFLADTRRMNVAMTRARKKL 600
Query: 176 WVMGNAGALTQSDDWAALIADSKARNCY 203
V+G++ L+++ +A I ++ N Y
Sbjct: 601 VVIGDSATLSKAKFYADFIIYAEKLNAY 628
>gi|63054938|gb|AAY29007.1| dna2-nam7 helicase family protein [Pyrococcus sp. 121]
Length = 179
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 113/186 (60%), Gaps = 27/186 (14%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESV--INLPD---EVYYKDP---VLRP---YV 50
+L+VQYRM+ I +FPSR FYQG++ E V I L D +V KDP V+ P V
Sbjct: 5 MLTVQYRMNERIMEFPSREFYQGKIVADERVKGITLRDLGVDVELKDPWAEVINPENVVV 64
Query: 51 FFDV--IHGR-ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQ 107
F D I R E R GS S +N EAK + E ++K L++ G+ +G+ITPY Q
Sbjct: 65 FIDTSKIENRWERQRRGSESRENPLEAK---IVTEVVKKLLEA-GVKPEWIGVITPYDDQ 120
Query: 108 LKCLQHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNV 166
R++++ +++ + TVD +QG+E++VII+S VR++ G +GF+ D+RR+NV
Sbjct: 121 --------RDLISLSVPEEIEVKTVDGYQGREKEVIILSFVRSNRAGEIGFLKDLRRLNV 172
Query: 167 ALTRAR 172
+LTRA+
Sbjct: 173 SLTRAK 178
>gi|183229840|ref|XP_657569.2| regulator of nonsense transcripts [Entamoeba histolytica HM-1:IMSS]
gi|169803118|gb|EAL52192.2| regulator of nonsense transcripts, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 966
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 106/203 (52%), Gaps = 30/203 (14%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESV--------INL-PDEVYYKDPVLRPYVFF 52
+L QYRMHP I +F ++ FY +L + S+ IN PD Y +P++ F
Sbjct: 714 MLKTQYRMHPAISEFSNKMFYSSKLENGVSIDDRFDNRIINFFPD---YTNPIM-----F 765
Query: 53 DVIHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQ 112
G E + SY N E + + E ++K L + + + +GII+PY+ Q
Sbjct: 766 INCDGTEHYGSSGTSYNNAGEVQI---IQEVVEKLLNN-DIEENEIGIISPYQAQ----- 816
Query: 113 HEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRA 171
+ +++ + + +D FQG E++ II SCVR++ GVGFV D +R+NVALTRA
Sbjct: 817 ---QELISQYVSTKIKVANIDGFQGNEKEYIIFSCVRSNQTLGVGFVNDYKRLNVALTRA 873
Query: 172 RRALWVMGNAGALTQSDDWAALI 194
+R L ++GN L S W LI
Sbjct: 874 KRGLIIIGNIPTLVTSKVWNMLI 896
>gi|345513474|ref|ZP_08792995.1| hypothetical protein BSEG_03593 [Bacteroides dorei 5_1_36/D4]
gi|229437375|gb|EEO47452.1| hypothetical protein BSEG_03593 [Bacteroides dorei 5_1_36/D4]
Length = 630
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 106/189 (56%), Gaps = 7/189 (3%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL VQYRM+ I F S FYQG L + V + Y P+ +V + ++ E
Sbjct: 429 LLKVQYRMNDEIMHFSSEWFYQGELKSAPEV-KYRGILDYDTPI--EWVNTEGMNCNEEF 485
Query: 62 RGGSVSYQNVDEAKFGVC-LYEHLQKTLKSMGLG-KVTVGIITPYKLQLKCLQHEF-RNV 118
G S N EA + L ++ K K L ++ VG+I+PYK Q++ L+ R+
Sbjct: 486 VGESFGRINKAEAALSISQLTHYINKIGKERFLEERIDVGLISPYKAQVQYLRQLIKRDA 545
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWV 177
+ INTVD FQGQERDVI++S VRA+ G +GF+ D+RRMNVA+TRAR L +
Sbjct: 546 FFKPYRHLITINTVDGFQGQERDVILISLVRANEDGQIGFLNDLRRMNVAITRARMKLII 605
Query: 178 MGNAGALTQ 186
+G+A LT+
Sbjct: 606 LGDASTLTK 614
>gi|50286349|ref|XP_445603.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524908|emb|CAG58514.1| unnamed protein product [Candida glabrata]
Length = 964
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 114/208 (54%), Gaps = 10/208 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTD--SESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
L VQYRM+P + +FPS FY+G L + +E L + + P+ + F +G E
Sbjct: 633 LEVQYRMNPFLSEFPSNMFYEGSLQNGVTEEQRTLANSTF-PWPINGIPMMFWANYGSEE 691
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLK-CLQH-EFRNV 118
SY N EA C E + L G+ +G+ITPY+ Q LQ+ +
Sbjct: 692 MSANGTSYLNRTEAMN--C--ERIITRLFRDGVKPEQIGVITPYEGQRAYVLQYMQMNGA 747
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWV 177
L+ E ++ + +VDAFQG+E+D II+SCVRA+ +GF+ D RR+NV LTRA+ L +
Sbjct: 748 LDKELYSNVEVASVDAFQGREKDFIILSCVRANEQQMIGFLRDPRRLNVGLTRAKYGLII 807
Query: 178 MGNAGALTQSDDWAALIADSKARNCYMD 205
+GN +L+++ W L+ + + C ++
Sbjct: 808 LGNPRSLSRNTLWNHLLLHFRQKGCLVE 835
>gi|237708745|ref|ZP_04539226.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|423228836|ref|ZP_17215242.1| hypothetical protein HMPREF1063_01062 [Bacteroides dorei
CL02T00C15]
gi|423247648|ref|ZP_17228696.1| hypothetical protein HMPREF1064_04902 [Bacteroides dorei
CL02T12C06]
gi|229457171|gb|EEO62892.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|392631541|gb|EIY25512.1| hypothetical protein HMPREF1064_04902 [Bacteroides dorei
CL02T12C06]
gi|392635575|gb|EIY29474.1| hypothetical protein HMPREF1063_01062 [Bacteroides dorei
CL02T00C15]
Length = 630
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 106/189 (56%), Gaps = 7/189 (3%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL VQYRM+ I F S FYQG L + V + Y P+ +V + ++ E
Sbjct: 429 LLKVQYRMNDEIMHFSSEWFYQGELKSAPEV-KYRGILDYDTPI--EWVNTEGMNYNEEF 485
Query: 62 RGGSVSYQNVDEAKFGVC-LYEHLQKTLKSMGLG-KVTVGIITPYKLQLKCLQHEF-RNV 118
G S N EA + L ++ K K L ++ VG+I+PYK Q++ L+ R+
Sbjct: 486 VGESFGRINKAEAALSISQLTHYINKIGKERFLEERIDVGLISPYKAQVQYLRQLIKRDA 545
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWV 177
+ INTVD FQGQERDVI++S VRA+ G +GF+ D+RRMNVA+TRAR L +
Sbjct: 546 FFKPYRHLITINTVDGFQGQERDVILISLVRANEDGQIGFLNDLRRMNVAITRARMKLII 605
Query: 178 MGNAGALTQ 186
+G+A LT+
Sbjct: 606 LGDASTLTK 614
>gi|148270052|ref|YP_001244512.1| putative DNA helicase [Thermotoga petrophila RKU-1]
gi|147735596|gb|ABQ46936.1| putative DNA helicase [Thermotoga petrophila RKU-1]
Length = 650
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 122/219 (55%), Gaps = 28/219 (12%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESV---------INLPDEVYYKDPVLRP---Y 49
LL QYRM+ + +FPS FY G+L +E V + +P+ + D VL P
Sbjct: 442 LLDTQYRMNELLMEFPSEEFYDGKLKAAEKVRNITLFDLGVEIPNFGKFWDVVLSPKNVL 501
Query: 50 VFFDVIHGR---ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKL 106
VF D + E R S S +N EA+ + E ++K L SMG+ + +GIITPY
Sbjct: 502 VFIDTKNRSDRFERQRKDSPSRENPLEAQ---IVKEVVEKLL-SMGVKEDWIGIITPYDD 557
Query: 107 QLKCLQHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMN 165
Q+ + R ++ ++ + +++VD FQG+E++VII+S VR++ +G +GF+ D+RR+N
Sbjct: 558 QVNLI----RELIEAK----VEVHSVDGFQGREKEVIIISFVRSNKNGEIGFLEDLRRLN 609
Query: 166 VALTRARRALWVMGNAGALTQSDDWAALIADSKARNCYM 204
V+LTRA+R L G++ L+ + + K + Y+
Sbjct: 610 VSLTRAKRKLIATGDSSTLSVHPTYRRFVEFVKKKGTYV 648
>gi|410074371|ref|XP_003954768.1| hypothetical protein KAFR_0A01950 [Kazachstania africana CBS 2517]
gi|372461350|emb|CCF55633.1| hypothetical protein KAFR_0A01950 [Kazachstania africana CBS 2517]
Length = 995
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 117/215 (54%), Gaps = 14/215 (6%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLRPYVFFDVIHGRESH 61
L VQYRM+P++ +FPS FY+G L + ++ + P+ + F +GRE
Sbjct: 646 LEVQYRMNPNLSEFPSNMFYEGSLQNGVTIEQRTVSNSTFPWPIHGVPMMFWANYGREEI 705
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
SY N EA C E + L G+ +G+ITPY+ Q + + +N
Sbjct: 706 SANGTSYLNRIEAMN--C--ERIITRLFKDGVKPEQIGVITPYEGQRAYILQYMQ--MNG 759
Query: 122 EEGKDLYIN----TVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRALW 176
K+LY+ +VDAFQG+E+D II+SCVRA+ +GF+ D RR+NV LTRA+ L
Sbjct: 760 VLDKNLYVKVEVASVDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAKYGLI 819
Query: 177 VMGNAGALTQSDDWAALIADSKARNCYMD--MDSL 209
++GN +L+++ W L+ + + C ++ +D+L
Sbjct: 820 ILGNPRSLSRNLLWNHLLIHFREKGCLVEGPLDNL 854
>gi|15642780|ref|NP_227821.1| DNA helicase [Thermotoga maritima MSB8]
gi|4980488|gb|AAD35099.1|AE001689_5 DNA helicase, putative [Thermotoga maritima MSB8]
Length = 650
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 122/219 (55%), Gaps = 28/219 (12%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESV---------INLPDEVYYKDPVLRP---Y 49
LL QYRM+ + +FPS FY G+L +E V + +P+ + D VL P
Sbjct: 442 LLDTQYRMNELLMEFPSEEFYDGKLKAAEKVRNITLFDLGVEIPNFGKFWDVVLSPKNVL 501
Query: 50 VFFDVIHGR---ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKL 106
VF D + E R S S +N EA+ + E ++K L SMG+ + +GIITPY
Sbjct: 502 VFIDTKNRSDRFERQRKDSPSRENPLEAQ---IVKEVVEKLL-SMGVKEDWIGIITPYDD 557
Query: 107 QLKCLQHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMN 165
Q+ + R ++ ++ + +++VD FQG+E++VII+S VR++ +G +GF+ D+RR+N
Sbjct: 558 QVNLI----RELIEAK----VEVHSVDGFQGREKEVIIISFVRSNKNGEIGFLEDLRRLN 609
Query: 166 VALTRARRALWVMGNAGALTQSDDWAALIADSKARNCYM 204
V+LTRA+R L G++ L+ + + K + Y+
Sbjct: 610 VSLTRAKRKLIATGDSSTLSVHPTYRRFVEFVKKKGTYV 648
>gi|282859892|ref|ZP_06268980.1| putative DNA helicase [Prevotella bivia JCVIHMP010]
gi|424899896|ref|ZP_18323438.1| hypothetical protein PrebiDRAFT_0585 [Prevotella bivia DSM 20514]
gi|282587295|gb|EFB92512.1| putative DNA helicase [Prevotella bivia JCVIHMP010]
gi|388592096|gb|EIM32335.1| hypothetical protein PrebiDRAFT_0585 [Prevotella bivia DSM 20514]
Length = 637
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/201 (38%), Positives = 113/201 (56%), Gaps = 10/201 (4%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVL-----RPYVFFDVIH 56
LL VQYRM+ I F S FY G + +S I + Y P+L + + D +
Sbjct: 429 LLKVQYRMNEEIMRFSSDWFYHGEV-ESAPQIRYRSILDYDHPMLWLDTSKVDIGDDEVS 487
Query: 57 GRESHRGGSVSYQNVDEAKFGV-CLYEHLQKTLKSMGLGK-VTVGIITPYKLQLKCLQHE 114
+E G S N EA+ + L E+ K K L + + VG+I+PY+ Q++ L+
Sbjct: 488 FKEEFVGESFGRINKGEAELTLNSLQEYFTKIGKQRILDESIDVGVISPYRAQVQYLRKL 547
Query: 115 FRNVLNSEEGKDLY-INTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRAR 172
R + + L +NTVD FQGQERDVI++S VRA++ G +GF+ D+RRMNVA+TRAR
Sbjct: 548 IRKRKFFKPYRHLITVNTVDGFQGQERDVILISMVRANDEGQIGFLKDLRRMNVAITRAR 607
Query: 173 RALWVMGNAGALTQSDDWAAL 193
L ++GNA +T+ +A L
Sbjct: 608 MKLIILGNAETMTKHPFYAKL 628
>gi|449265846|gb|EMC76976.1| hypothetical protein A306_15842 [Columba livia]
Length = 911
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 109/201 (54%), Gaps = 17/201 (8%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVL--RPYVFFDVIHGR 58
+LL QYR HP I + FY+G L D S + + P+L P + F ++G
Sbjct: 687 ILLRTQYRCHPAISAIANELFYEGNLIDGVSAND-------RSPLLDWLPTLCFYSVNGV 739
Query: 59 ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV 118
E + S+ N+ E F V L + L + G+ +G+IT YK Q+ +Q+ +V
Sbjct: 740 EQIERDN-SFYNMAEVHFTV----KLIQALTASGIEGSAIGVITLYKSQMCKIQNLLSSV 794
Query: 119 LNSE-EGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWV 177
+ E K + ++TVDAFQG E+++I++SCVR GF+ +RMNVALTRA+R L +
Sbjct: 795 QSEAFETKAVQVSTVDAFQGAEKEIIVLSCVRTRQ--FGFIDSEKRMNVALTRAKRHLLI 852
Query: 178 MGNAGALTQSDDWAALIADSK 198
+GN L+++ W +I K
Sbjct: 853 VGNLACLSKNRLWGRVICHCK 873
>gi|283046856|gb|ADB04944.1| MIP14162p [Drosophila melanogaster]
Length = 317
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 110/205 (53%), Gaps = 18/205 (8%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESHR 62
LS QYRMHP I +P+++FY+ +L ++E + P++ PY ++ + +S+
Sbjct: 108 LSTQYRMHPEICRWPNQYFYEDQLINAECT------ARFASPLI-PYCVINLKYTCDSNG 160
Query: 63 GGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNSE 122
+ S N +EA+F L + K + S + + G+I+PY+ Q L + +N
Sbjct: 161 AQNKSISNNEEARFVAKLLTEMDKHMPS---KRFSYGLISPYQNQCYALSQVIPSHMNIT 217
Query: 123 EGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGNAG 182
TVD++QG E+DVII+S A G GF+ + +R+NVALTR RR L + GN
Sbjct: 218 P------QTVDSYQGLEKDVIIIS--NARTRGCGFLTNYQRLNVALTRPRRCLVICGNFE 269
Query: 183 ALTQSDDWAALIADSKARNCYMDMD 207
L + W L+ D++ R Y ++D
Sbjct: 270 DLKSVEMWRNLLDDARKRKVYFNLD 294
>gi|343415926|emb|CCD20512.1| hypothetical protein, conserved (fragment) [Trypanosoma vivax Y486]
Length = 794
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/238 (34%), Positives = 121/238 (50%), Gaps = 35/238 (14%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVL------RPYVFFDVIH 56
L++QYR HP I F S FY G + D +P E + +P +F+D
Sbjct: 576 LNLQYRTHPFIYRFSSMAFYGGTVLD-----GVPAEKRDASGIFPWPNPEKPMLFYDC-S 629
Query: 57 GRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFR 116
G E S+ N EA+ + + + + L+S + VGII+PY+ Q + ++ R
Sbjct: 630 GVEEVGDSGASFLNEAEARATISVVDAV---LESGAVRPDEVGIISPYRAQCEYMRE--R 684
Query: 117 NVLNSEEGKDLY----INTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRA 171
+ GKD+Y I+TVDA+QG+E+++II+SCVR + VGF+ D RR+NV+LTRA
Sbjct: 685 LLQWGTAGKDIYEKVEISTVDAYQGREKEIIILSCVRNNEERTVGFIGDERRLNVSLTRA 744
Query: 172 RRALWVMGNAGALTQSDDWAALIADSKARNCYMDMDSLPKEFSVALAAKAPGYGPLQG 229
RR L +G A AL W+ L+ YM E S+A+ PL+G
Sbjct: 745 RRGLIAIGKAEALRGDKCWSKLLL-------YMG------EHSLAVTGPIRSLAPLEG 789
>gi|254826809|ref|NP_060862.3| prematurely terminated mRNA decay factor-like [Homo sapiens]
gi|119626686|gb|EAX06281.1| hCG21296, isoform CRA_c [Homo sapiens]
Length = 2104
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/203 (34%), Positives = 108/203 (53%), Gaps = 17/203 (8%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLR--PYVFFDVIHGR 58
+LL QYR HP I + FY+G L + + I + P+L P + F + G
Sbjct: 1871 ILLRTQYRCHPAISAIANDLFYKGALMNGVTEIE-------RSPLLEWLPTLCFYNVKGL 1923
Query: 59 ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV 118
E + S+ NV EA F + L + +L + G+ +G+IT YK Q+ L H V
Sbjct: 1924 EQIERDN-SFHNVAEATFTLKLIQ----SLIASGIAGSMIGVITLYKSQMYKLCHLLSAV 1978
Query: 119 -LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWV 177
+ + K + ++TVDAFQG E+++II+SCVR VGF+ +RMNVALTR +R L +
Sbjct: 1979 DFHHPDIKTVQVSTVDAFQGAEKEIIILSCVRT--RQVGFIDSEKRMNVALTRGKRHLLI 2036
Query: 178 MGNAGALTQSDDWAALIADSKAR 200
+GN L ++ W +I + R
Sbjct: 2037 VGNLACLRKNQLWGRVIQHCEGR 2059
>gi|294875682|ref|XP_002767434.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239869001|gb|EER00152.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 559
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 104/192 (54%), Gaps = 14/192 (7%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDE----VYYKDPVLRPYVFFDVIHGR 58
L VQYRMHP + +FPS+ FY G L + I + D V + P +FF G+
Sbjct: 245 LEVQYRMHPSLAEFPSQTFYDGCLQNG---ITMEDRQVSGVKFPWPREEMPMFFYNSTGQ 301
Query: 59 ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFR-- 116
E SY N EA E + GL +G++TPY+ Q +Q +
Sbjct: 302 EEISASGTSYLNRSEA----INIEKIITYFLRAGLKGSQIGVVTPYEGQRAYIQQVLQRQ 357
Query: 117 NVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRAL 175
L+++ + + I +VDAFQG+E+D I++SCVR++ G+GF+ D RR+NVALTRAR L
Sbjct: 358 TTLSAKMYESIEIASVDAFQGREKDFIVLSCVRSNQRAGLGFLNDPRRLNVALTRARYGL 417
Query: 176 WVMGNAGALTQS 187
+ GNA L ++
Sbjct: 418 VICGNAQVLARA 429
>gi|307173791|gb|EFN64578.1| Helicase sen1 [Camponotus floridanus]
Length = 1634
Score = 109 bits (272), Expect = 3e-21, Method: Composition-based stats.
Identities = 71/225 (31%), Positives = 121/225 (53%), Gaps = 38/225 (16%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDS-ESVINLPDEVYYKDPVLRPYVFFDVIHGRE 59
++L++QYRM I +P+++FY G+L +S + + P Y D
Sbjct: 1424 IMLNMQYRMDYAISYWPNKYFYDGKLKNSIDFRMKFP---------FHSYRILD-----H 1469
Query: 60 SHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSM-------GLGKVTVGIITPYKLQ----L 108
+ + + N EA+F + KT+ +M + +++G++TPY Q L
Sbjct: 1470 NFKQNEDKFSNTIEAEF-------IAKTILAMLTFTNWENVNPISLGVLTPYNNQRTLVL 1522
Query: 109 KCLQHEFRNVLNSEEGK-DLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVA 167
+ + ++ ++ K +NTVD+FQGQERD+IIMSCVR+ HG+GF++D +R+ VA
Sbjct: 1523 NKINEKISSIPDNLRNKISFEVNTVDSFQGQERDIIIMSCVRS--HGIGFLSDRQRLCVA 1580
Query: 168 LTRARRALWVMGNAGALTQSDDWAALIADSKARN--CYMDMDSLP 210
LTRA+ +L + GN + W AL++D+K+R C +D + P
Sbjct: 1581 LTRAKYSLILCGNFNTFLKDKMWNALLSDAKSRGVLCRVDAHAAP 1625
>gi|296195731|ref|XP_002745520.1| PREDICTED: uncharacterized protein LOC100413039 [Callithrix jacchus]
Length = 2098
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/203 (34%), Positives = 108/203 (53%), Gaps = 17/203 (8%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLR--PYVFFDVIHGR 58
+LL QYR HP I + FY+G L + + I + P+L P + F + G
Sbjct: 1873 VLLRTQYRCHPAISAIANDMFYEGNLMNGVTEIE-------RSPLLEWLPTLCFYNVKGL 1925
Query: 59 ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV 118
E + S+ NV EA F + L + +L + G+ +G+IT YK Q+ L H V
Sbjct: 1926 EQLERDN-SFHNVAEAAFTLKLIQ----SLIASGIAGSMIGVITLYKSQMYKLCHLLSTV 1980
Query: 119 -LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWV 177
+ + K + ++TVDAFQG E+++II+SCVR VGF+ +RMNVALTR +R L +
Sbjct: 1981 DFDHPDIKTVQVSTVDAFQGAEKEIIILSCVRT--RQVGFIDSEKRMNVALTRGKRHLLI 2038
Query: 178 MGNAGALTQSDDWAALIADSKAR 200
+GN L ++ W +I + R
Sbjct: 2039 VGNLVCLRKNRLWGRVIQHCEGR 2061
>gi|387790987|ref|YP_006256052.1| ATPase [Solitalea canadensis DSM 3403]
gi|379653820|gb|AFD06876.1| Putative ATPase (DUF699) [Solitalea canadensis DSM 3403]
Length = 642
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 117/214 (54%), Gaps = 21/214 (9%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVI---HGR 58
LL VQYRM+ I +F ++ FY+G+LT E+V N ++ +D P +F D
Sbjct: 428 LLEVQYRMNKAIMEFSNQQFYRGKLTAFETVAN--RKLVKEDE--NPLLFIDTAGCGFNE 483
Query: 59 ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMG------LGKVT-VGIITPYKLQLKCL 111
+ G S S N +E G L +L L+ + + K+ VG+I+PYK Q+ L
Sbjct: 484 RTENGRSAS--NPEE---GNLLMNYLNDYLQQLTNYDNEVMDKIRRVGVISPYKAQVSFL 538
Query: 112 QHEFRNVLN-SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALT 169
+ N + GK + NTVD FQGQE D+I +S VR++ +GF+AD RRMNVA+T
Sbjct: 539 TEQLENFETLASLGKKISFNTVDGFQGQECDLIAISLVRSNEKNEIGFLADTRRMNVAIT 598
Query: 170 RARRALWVMGNAGALTQSDDWAALIADSKARNCY 203
RA++ L ++G++ L+ +A+ + + + Y
Sbjct: 599 RAKKKLLIIGDSATLSSHPFYASFLDHVQNNSAY 632
>gi|212225034|ref|YP_002308270.1| DNA helicase [Thermococcus onnurineus NA1]
gi|212009991|gb|ACJ17373.1| DNA helicase [Thermococcus onnurineus NA1]
Length = 660
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/224 (33%), Positives = 124/224 (55%), Gaps = 34/224 (15%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESV---------INLP------DEVYYKDPVL 46
+L+VQYRM+ + +FP+R FY G++ + V I P DE+ VL
Sbjct: 443 MLTVQYRMNERLMEFPNREFYDGKIKAAPGVKCITLTDLGIKCPNFGEPWDEILKAGNVL 502
Query: 47 RPYVFFDVIHGRES---HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITP 103
VF D E R GS S +N EA+ + E ++K L+ MG+ +G+ITP
Sbjct: 503 ---VFIDTSKHPEKWERQRRGSESRENPLEAR---IVAETVEKLLE-MGVKPEWIGVITP 555
Query: 104 YKLQLKCLQHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIR 162
Y Q R++++S +++ + TVD +QG+E++VII+S VR++ G VGF+ D+R
Sbjct: 556 YDDQ--------RDLISSLVPEEIEVRTVDGYQGREKEVIILSFVRSNERGEVGFLKDLR 607
Query: 163 RMNVALTRARRALWVMGNAGALTQSDDWAALIADSKARNCYMDM 206
R+NV+LTRA+R L V+G++ L+ + I KA ++++
Sbjct: 608 RLNVSLTRAKRKLIVVGDSETLSVHSTYKRFIEFVKAEGRFVEI 651
>gi|403275747|ref|XP_003929595.1| PREDICTED: uncharacterized protein LOC101051186 [Saimiri boliviensis
boliviensis]
Length = 2038
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/203 (34%), Positives = 108/203 (53%), Gaps = 17/203 (8%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLR--PYVFFDVIHGR 58
+LL QYR HP I + FY+G L + + I + P+L P + F + G
Sbjct: 1813 VLLRTQYRCHPAISAIANDMFYEGNLMNGVTEIE-------RSPLLEWLPTLCFYNVKGL 1865
Query: 59 ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV 118
E + S+ NV EA F + L + +L + G+ +G+IT YK Q+ L H V
Sbjct: 1866 EQLERDN-SFHNVAEAAFTLKLIQ----SLIASGIEGSMIGVITLYKSQMYKLCHLLSAV 1920
Query: 119 -LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWV 177
+ + K + ++TVDAFQG E+++II+SCVR VGF+ +RMNVALTR +R L +
Sbjct: 1921 DFDHPDIKTVQVSTVDAFQGAEKEIIILSCVRT--RQVGFIDSEKRMNVALTRGKRHLLI 1978
Query: 178 MGNAGALTQSDDWAALIADSKAR 200
+GN L ++ W +I + R
Sbjct: 1979 VGNLACLRKNRLWGRVIQHCEGR 2001
>gi|15218803|ref|NP_176754.1| DNA helicase domain-containing protein [Arabidopsis thaliana]
gi|332196301|gb|AEE34422.1| DNA helicase domain-containing protein [Arabidopsis thaliana]
Length = 1065
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/213 (34%), Positives = 109/213 (51%), Gaps = 17/213 (7%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-------LPDEVYYKDPVLRPYVFFDV 54
+L++QYRMH I FP++ Y ++ D+ +V LP E+Y PY F ++
Sbjct: 632 MLNIQYRMHCSISSFPNKELYGKKILDAPTVRQRNYTKQYLPGEMY------GPYSFINI 685
Query: 55 IHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHE 114
+GRE + G + V + ++ VG+I+PYK Q+ +Q +
Sbjct: 686 AYGREEYGEGEGRSLKNNVEVVVVAAIIANLLQVSEKTKTRINVGVISPYKAQVIAIQEK 745
Query: 115 FRNVLNSEEGK--DLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRA 171
+ + G L I TVD FQG E D+II+S VR++ G VGF+ + RR NV LTRA
Sbjct: 746 IQETSIGDAGGLFSLRIRTVDGFQGGEEDIIIVSTVRSNGVGRVGFLGNRRRTNVLLTRA 805
Query: 172 RRALWVMGNAGALTQSDD-WAALIADSKARNCY 203
R LW++GN L S W LI D+K R C+
Sbjct: 806 RFCLWILGNEATLMNSKSVWRNLIQDAKERGCF 838
>gi|284038257|ref|YP_003388187.1| ATPase AAA [Spirosoma linguale DSM 74]
gi|283817550|gb|ADB39388.1| AAA ATPase [Spirosoma linguale DSM 74]
Length = 632
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 111/209 (53%), Gaps = 15/209 (7%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL QYRMH HI + S+ FY+ +L SV ++ D L VF D
Sbjct: 425 LLDEQYRMHEHIMGYSSQVFYKNKLKAHGSVAR--HSLFDSDTAL---VFVDTAGCGFDE 479
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKV-----TVGIITPYKLQLKCLQHEFR 116
+ S N +EA L +HL + + + T+ II+PYK Q+ L+ +
Sbjct: 480 KLDGTSSTNPEEAAL---LMKHLTQLVTDLSTRYTKENFPTIAIISPYKQQINVLKDQLL 536
Query: 117 NVLNSEEGKD-LYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRA 174
+ + D + +NT+D+FQGQERD++ +S R++ G +GF++DIRRMNVA+TRAR+
Sbjct: 537 HTPELQPYSDRISVNTIDSFQGQERDIVYISMTRSNAEGEIGFLSDIRRMNVAMTRARKK 596
Query: 175 LWVMGNAGALTQSDDWAALIADSKARNCY 203
L ++G++ L +A IA ++ N Y
Sbjct: 597 LVIVGDSATLAGLPFYADFIAYAEQLNAY 625
>gi|403253185|ref|ZP_10919488.1| DNA helicase [Thermotoga sp. EMP]
gi|402811449|gb|EJX25935.1| DNA helicase [Thermotoga sp. EMP]
Length = 650
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 122/219 (55%), Gaps = 28/219 (12%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINL---------PDEVYYKDPVLRP---Y 49
LL QYRM+ + +FPS FY G+L +E V N+ P+ + D VL P
Sbjct: 442 LLDTQYRMNELLMEFPSEEFYDGKLKAAEEVKNITLFDLGVEIPNFGKFWDVVLSPKNVL 501
Query: 50 VFFDVIHGR---ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKL 106
VF D + E R S S +N EA+ + E ++K L SMG+ + +GIITPY
Sbjct: 502 VFIDTKNRPDRFERQRKDSPSRENPLEAQ---IVKEVVEKLL-SMGVKEDWIGIITPYDD 557
Query: 107 QLKCLQHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMN 165
Q+ + R ++ ++ + +++VD FQG+E++VII+S VR++ +G +GF+ D+RR+N
Sbjct: 558 QVNLI----RELIEAK----VEVHSVDGFQGREKEVIIISFVRSNKNGEIGFLEDLRRLN 609
Query: 166 VALTRARRALWVMGNAGALTQSDDWAALIADSKARNCYM 204
V+LTRA+R L G++ L+ + + K + Y+
Sbjct: 610 VSLTRAKRKLIATGDSSTLSVHPTYRRFVEFVKKKGTYV 648
>gi|357491665|ref|XP_003616120.1| Regulator of nonsense transcripts-like protein [Medicago
truncatula]
gi|355517455|gb|AES99078.1| Regulator of nonsense transcripts-like protein [Medicago
truncatula]
Length = 932
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 124/258 (48%), Gaps = 47/258 (18%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLP-DEVYYKDPVLRPYVFFDVIHGRES 60
+L+VQYRMHP I FP + FY G+L D+ V ++++ + + Y F ++ G+E
Sbjct: 676 MLNVQYRMHPSISLFPCKEFYDGKLCDAPVVGEESYNKLFLEGEMYSSYSFINIAKGKEQ 735
Query: 61 HRGGSVSYQNVDE----AKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFR 116
G S +N+ E ++ LYE KT K KV++GI++PY Q+ +Q E
Sbjct: 736 FGHGQ-SLKNMVEVAVISEIIKSLYEVFMKTRK-----KVSIGIVSPYNAQVYEIQEEIE 789
Query: 117 NVLNSEEGK-DLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRA---- 171
K + + +VD FQG E D+II+S VR++ RR NVALTRA
Sbjct: 790 QYTKVANSKFSVNVRSVDGFQGGEEDIIIISTVRSNG---------RRTNVALTRARYDV 840
Query: 172 --------------------RRALWVMGNAGALTQSDD-WAALIADSKARNCYMDMDSLP 210
R LW++GNA L S W ++ D+K R+C+ +++
Sbjct: 841 YNVQFVMLFLCLLKTEFILCRYCLWILGNASTLINSGSVWRNVVIDAKKRDCFHNVEE-D 899
Query: 211 KEFSVALAAKAPGYGPLQ 228
K+ S A+ P L+
Sbjct: 900 KKLSQAIKDVLPQLRQLE 917
>gi|410957029|ref|XP_003985137.1| PREDICTED: uncharacterized protein FLJ44066, partial [Felis catus]
Length = 1242
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 114/225 (50%), Gaps = 25/225 (11%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLR--PYVFFDVIHGR 58
+LL QYR HP I + FY+G L + S + P+L P + F + G
Sbjct: 1008 VLLRTQYRCHPAISAISNDLFYEGNLMNGISETE-------RSPLLEWLPTLCFYNVKGL 1060
Query: 59 ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV 118
E + S+ NV EA F + L ++L G+ +G+IT YK Q+ L H V
Sbjct: 1061 EQIERDN-SFHNVAEAAFTL----KLIQSLIVSGIAGSVIGVITLYKSQMYKLCHSLNAV 1115
Query: 119 -LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWV 177
+ + K + ++TVDAFQG E+++II+SCVR VGF+ +RMNVALTR RR L +
Sbjct: 1116 DFDHPDIKAVQVSTVDAFQGAEKEIIILSCVRTRQ--VGFIDSEKRMNVALTRGRRHLLI 1173
Query: 178 MGNAGALTQSDDWAALIADSKAR--------NCYMDMDSLPKEFS 214
+GN L ++ W +I + R C ++ L K++S
Sbjct: 1174 VGNLACLRKNRLWGRVIQHCEGREDGLQHASQCEPQLNHLLKDYS 1218
>gi|6686403|gb|AAF23837.1|AC007234_9 F1E22.14 [Arabidopsis thaliana]
Length = 1076
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/213 (34%), Positives = 109/213 (51%), Gaps = 17/213 (7%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-------LPDEVYYKDPVLRPYVFFDV 54
+L++QYRMH I FP++ Y ++ D+ +V LP E+Y PY F ++
Sbjct: 632 MLNIQYRMHCSISSFPNKELYGKKILDAPTVRQRNYTKQYLPGEMY------GPYSFINI 685
Query: 55 IHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHE 114
+GRE + G + V + ++ VG+I+PYK Q+ +Q +
Sbjct: 686 AYGREEYGEGEGRSLKNNVEVVVVAAIIANLLQVSEKTKTRINVGVISPYKAQVIAIQEK 745
Query: 115 FRNVLNSEEGK--DLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRA 171
+ + G L I TVD FQG E D+II+S VR++ G VGF+ + RR NV LTRA
Sbjct: 746 IQETSIGDAGGLFSLRIRTVDGFQGGEEDIIIVSTVRSNGVGRVGFLGNRRRTNVLLTRA 805
Query: 172 RRALWVMGNAGALTQSDD-WAALIADSKARNCY 203
R LW++GN L S W LI D+K R C+
Sbjct: 806 RFCLWILGNEATLMNSKSVWRNLIQDAKERGCF 838
>gi|332023768|gb|EGI63992.1| Putative helicase senataxin [Acromyrmex echinatior]
Length = 1939
Score = 108 bits (271), Expect = 3e-21, Method: Composition-based stats.
Identities = 79/251 (31%), Positives = 126/251 (50%), Gaps = 33/251 (13%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
++L +QYRM I +P+R+FY G+L ++ Y Y D +
Sbjct: 1668 IMLDMQYRMEYAISYWPNRYFYGGKLKNATD--------YRMKFPFHAYRVLDHNFTQNY 1719
Query: 61 HRGGSVSYQNVDEAKF-GVCLYEHLQKTLKSMGLGKVTVGIITPYKLQ----LKCLQHEF 115
+ + N EA+F +Y L+ +T+G++TPY Q L + +
Sbjct: 1720 DK-----FSNTTEAEFVANIIYTMLKCAKWESTSTTITLGVLTPYNNQRTLVLNKINEKI 1774
Query: 116 RNVLNSEEGK-DLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRA 174
+V + + K +NTVD FQGQERDVIIMSCVR+S G+GF++D +R+ VALTRA+ +
Sbjct: 1775 SSVPDDTKKKISFEVNTVDGFQGQERDVIIMSCVRSS--GIGFLSDKQRLCVALTRAKHS 1832
Query: 175 LWVMGNAGALTQSDDWAALIADSKARN--CYMDMDSLP---KEFSVALAAKAPGYGPLQG 229
L + GN + W AL+ D++ R C MD ++ P K++ + + PLQ
Sbjct: 1833 LILCGNFRTFMKDKMWKALLTDARNRGILCRMDTNATPSMIKKYIIKI-------DPLQT 1885
Query: 230 KIPHNARGLRS 240
++ N L +
Sbjct: 1886 QLLQNGFALEA 1896
>gi|308505126|ref|XP_003114746.1| CRE-SMG-2 protein [Caenorhabditis remanei]
gi|308258928|gb|EFP02881.1| CRE-SMG-2 protein [Caenorhabditis remanei]
Length = 1067
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 111/219 (50%), Gaps = 25/219 (11%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVL---------------- 46
L VQYRMHP + +FPS FY G L + + L Y P+
Sbjct: 666 LQVQYRMHPVLSEFPSNAFYDGSLQNGVTESELELFFVYLRPIFADDRQMKGVDWHWPTP 725
Query: 47 -RPYVFFDVIHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYK 105
+P FF G E S+ N EA E L L G+ +G+ITPY+
Sbjct: 726 NKP-AFFWHCSGAEELSSSGTSFLNRTEAAN----VEKLVSKLIKGGVQPNQIGVITPYE 780
Query: 106 LQLKCLQHEF--RNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASN-HGVGFVADIR 162
Q + + + LNS+ + + I +VDAFQG+E+D II++CVR+++ G+GF+ D R
Sbjct: 781 GQRSFIVNYMHTQGTLNSKLYESVEIASVDAFQGREKDYIIVTCVRSNDILGIGFLNDPR 840
Query: 163 RMNVALTRARRALWVMGNAGALTQSDDWAALIADSKARN 201
R+NVA+TRA+ + V+GNA L + + W LI K ++
Sbjct: 841 RLNVAITRAKYGIVVVGNAKVLARHELWYELINHYKKKD 879
>gi|294893946|ref|XP_002774696.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239880149|gb|EER06512.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 375
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 125/230 (54%), Gaps = 16/230 (6%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRL-TDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
LL VQ RMHP I +F + +FY+GRL ++ +P + V V D + G E+
Sbjct: 153 LLDVQRRMHPSIAEFSNINFYEGRLHSEVGERAKIPGLYWPASGVQVCLVNIDALSGGET 212
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPY---KLQL-KCLQHEFR 116
G S+ N EAK + + + +++ G+ +GI+ PY K Q+ + L+ ++R
Sbjct: 213 RVG--TSFSNRAEAK---AVIDAMVVAVEA-GMEPGDIGIVVPYSGQKTQIERMLESDYR 266
Query: 117 NVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRAL 175
L E + INTVDAFQG ER++I+ S VR++ G +GF D +RMNV LTRA+R L
Sbjct: 267 --LPRESVGRISINTVDAFQGSERELILFSAVRSNRDGDIGFTGDPKRMNVMLTRAKRGL 324
Query: 176 WVMGNAGALT--QSDDWAALIADSKARNCYMDMDSLPKEFSVALAAKAPG 223
V G+ L+ DWA + +K+ C ++M ++ +V A+ + G
Sbjct: 325 VVFGDVKTLSADTEGDWARWVHWAKSTGCMVEMAEYLRKSAVNGASGSAG 374
>gi|321478114|gb|EFX89072.1| hypothetical protein DAPPUDRAFT_310816 [Daphnia pulex]
Length = 1238
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 130/250 (52%), Gaps = 26/250 (10%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
++L+ QYRM I ++PSR+FY G++ +E + ++ Y DV G E
Sbjct: 914 IMLNTQYRMASSICEWPSRYFYGGKIVTAEGL--------KRNGPCYDYRVLDVTDGIEQ 965
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKS-MGLGKVTVGIITPYKLQLKCLQHEFRNVL 119
S ++N EA V + ++ L S + +GK +VG+IT Y+ Q KC+ + R V
Sbjct: 966 LEEQS--FKNEKEA---VVVANIVKLILNSPLTVGK-SVGVITFYQSQKKCISEKLREVG 1019
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASN----HGVGFVADIRRMNVALTRARRAL 175
DL NTVD+FQG+E D++++SCVRA +GF+ ++ MNVA+TRA+ +L
Sbjct: 1020 CRASKIDL--NTVDSFQGRETDIVVISCVRAQQLKKLDSIGFIRSLQWMNVAMTRAKESL 1077
Query: 176 WVMGNAGALTQSDDWAALIADSKARNCYMDMDSLPKEFSVALAAKAPGYGPLQGKIPHNA 235
+ G+ L +++ LI ++++RN + S + + P Y P+Q +
Sbjct: 1078 ILCGHFETLQKNETCQDLINNARSRNLAHVVSSNSSSYDICPMIMRPPYSPVQQQ----- 1132
Query: 236 RGLRSAGQRH 245
R + + Q H
Sbjct: 1133 RMVSTFSQEH 1142
>gi|17380277|sp|O76512.1|RENT1_CAEEL RecName: Full=Regulator of nonsense transcripts 1; AltName:
Full=ATP-dependent helicase smg-2; AltName:
Full=Nonsense mRNA reducing factor 1; AltName:
Full=Up-frameshift suppressor 1 homolog
gi|3328177|gb|AAC26789.1| nonsense-mediated mRNA decay trans-acting factor [Caenorhabditis
elegans]
Length = 1069
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 114/203 (56%), Gaps = 10/203 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTD--SESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
L VQYRMHP + +FPS FY G L + +E+ ++ ++ +P FF G E
Sbjct: 672 LQVQYRMHPVLSEFPSNVFYDGSLQNGVTENDRHMTGVDWHWPKPNKP-AFFWHCSGSEE 730
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEF--RNV 118
S+ N EA E L L G+ +G+IT Y+ Q + + +
Sbjct: 731 LSASGTSFLNRTEAAN----VEKLVSKLIKAGVQPHQIGVITSYEGQRSFIVNYMHTQGT 786
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASN-HGVGFVADIRRMNVALTRARRALWV 177
LNS+ +++ I +VDAFQG+E+D II++CVR+++ G+GF++D RR+NVA+TRA+ L +
Sbjct: 787 LNSKLYENVEIASVDAFQGREKDYIIVTCVRSNDILGIGFLSDPRRLNVAITRAKYGLVL 846
Query: 178 MGNAGALTQSDDWAALIADSKAR 200
+GNA L + D W LI K++
Sbjct: 847 VGNAKVLARHDLWHELINHYKSK 869
>gi|74711848|sp|Q6ZU11.1|YD002_HUMAN RecName: Full=Uncharacterized protein FLJ44066
gi|34532402|dbj|BAC86416.1| unnamed protein product [Homo sapiens]
Length = 926
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/203 (34%), Positives = 108/203 (53%), Gaps = 17/203 (8%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLR--PYVFFDVIHGR 58
+LL QYR HP I + FY+G L + + I + P+L P + F + G
Sbjct: 693 ILLRTQYRCHPAISAIANDLFYKGALMNGVTEIE-------RSPLLEWLPTLCFYNVKGL 745
Query: 59 ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV 118
E + S+ NV EA F + L ++L + G+ +G+IT YK Q+ L H V
Sbjct: 746 EQIERDN-SFHNVAEATFTL----KLIQSLIASGIAGSMIGVITLYKSQMYKLCHLLSAV 800
Query: 119 -LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWV 177
+ + K + ++TVDAFQG E+++II+SCVR VGF+ +RMNVALTR +R L +
Sbjct: 801 DFHHPDIKTVQVSTVDAFQGAEKEIIILSCVRTRQ--VGFIDSEKRMNVALTRGKRHLLI 858
Query: 178 MGNAGALTQSDDWAALIADSKAR 200
+GN L ++ W +I + R
Sbjct: 859 VGNLACLRKNQLWGRVIQHCEGR 881
>gi|158295010|ref|XP_315956.4| AGAP005926-PA [Anopheles gambiae str. PEST]
gi|157015832|gb|EAA11070.5| AGAP005926-PA [Anopheles gambiae str. PEST]
Length = 1738
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 110/206 (53%), Gaps = 16/206 (7%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
+L QYRMHP I +P+R+FY G+L ++ E K L+PY+ + + +E
Sbjct: 1527 MLKTQYRMHPKICHWPNRYFYGGQLKNATCT-----EAMRKTIPLKPYMVISLSYDQELT 1581
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
+ Y N DE F V L + + + + IITPY + E L S
Sbjct: 1582 QAQYEIY-NKDEILFVVELMKQVVRCCDKHA----SFAIITPYARH----KEEMIQSLRS 1632
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGNA 181
+ K + ++++D+ QG+E DV+I+S R+ +G GF+ + R+NVALTRAR+ L + GN
Sbjct: 1633 TQLKRVEVHSIDSVQGKEFDVVIISLARS--NGAGFLNNPERINVALTRARQCLVLCGNF 1690
Query: 182 GALTQSDDWAALIADSKARNCYMDMD 207
G+L W++L+ D++ R Y ++
Sbjct: 1691 GSLKHKTVWSSLLEDAEKRKVYYHLE 1716
>gi|426345279|ref|XP_004040348.1| PREDICTED: uncharacterized protein C4orf21 homolog [Gorilla gorilla
gorilla]
Length = 1760
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/203 (34%), Positives = 109/203 (53%), Gaps = 17/203 (8%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLR--PYVFFDVIHGR 58
+LL QYR HP I + FY+G L + + I + P+L P + F + G
Sbjct: 1527 ILLRTQYRCHPAISAIANDLFYKGALMNGVTEIE-------RSPLLEWLPTLCFYNVKGL 1579
Query: 59 ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV 118
E + S+ NV EA F + L + +L + G+ +G+IT YK Q+ L H V
Sbjct: 1580 EQIERDN-SFHNVAEATFTLKLIQ----SLIASGIAGSMIGVITLYKSQMYKLCHLLSAV 1634
Query: 119 -LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWV 177
+ + K + ++TVDAFQG E+++II+SCVR + VGF+ +RMNVALTR +R L +
Sbjct: 1635 DFHHPDIKTVQVSTVDAFQGAEKEIIILSCVRTRH--VGFIDSEKRMNVALTRGKRHLLI 1692
Query: 178 MGNAGALTQSDDWAALIADSKAR 200
+GN L ++ W +I + R
Sbjct: 1693 VGNLACLRKNRLWGRVIQHCEGR 1715
>gi|332820104|ref|XP_517401.3| PREDICTED: uncharacterized protein LOC461442 [Pan troglodytes]
Length = 2104
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/203 (34%), Positives = 108/203 (53%), Gaps = 17/203 (8%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLR--PYVFFDVIHGR 58
+LL QYR HP I + FY+G L + + I + P+L P + F + G
Sbjct: 1871 ILLRTQYRCHPAISAIANDLFYKGALMNGVTEIE-------RSPLLEWLPTLCFYNVKGL 1923
Query: 59 ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV 118
E + S+ NV EA F + L + +L + G+ +G+IT YK Q+ L H V
Sbjct: 1924 EQIERDN-SFHNVAEATFTLKLIQ----SLIASGIAGSMIGVITLYKSQMYKLCHLLSAV 1978
Query: 119 -LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWV 177
+ + K + ++TVDAFQG E+++II+SCVR VGF+ +RMNVALTR +R L +
Sbjct: 1979 DFHHPDIKTVQVSTVDAFQGAEKEIIILSCVRT--RQVGFIDSEKRMNVALTRGKRHLLI 2036
Query: 178 MGNAGALTQSDDWAALIADSKAR 200
+GN L ++ W +I + R
Sbjct: 2037 VGNLACLRKNRLWGRVIQHCEGR 2059
>gi|268324732|emb|CBH38320.1| putative ATP-dependent helicase [uncultured archaeon]
Length = 658
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 119/213 (55%), Gaps = 21/213 (9%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN------LPDEVYYKDPVLRPYVFFDV 54
++L VQYRM+ I +FP+ FY G+L E V LP+ V + ++P++F D
Sbjct: 453 VMLDVQYRMNEEIAEFPNWEFYDGKLKADEQVKRRTLMDILPESVDEESEDVKPFLFIDT 512
Query: 55 ---IHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCL 111
E R GS S +N EA+ L + + + L + G+ + +I+PY Q+ +
Sbjct: 513 GGNAELEERVRKGSTSRENPGEAR----LVKDVAERLLNRGIRPEDIAVISPYDDQVVHI 568
Query: 112 QHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTR 170
+ +L+ E L I TVD FQG+E++V+I+S VR++ + +GF+ D+RR+NV++TR
Sbjct: 569 KR----MLHVE---GLEIKTVDGFQGREKEVVIVSFVRSNKSRTIGFLKDLRRLNVSITR 621
Query: 171 ARRALWVMGNAGALTQSDDWAALIADSKARNCY 203
A+R L ++G++ L + L+A +K Y
Sbjct: 622 AKRKLVLIGDSNTLESEGCYRRLVALAKESGAY 654
>gi|301781242|ref|XP_002926037.1| PREDICTED: hypothetical protein LOC100466860 [Ailuropoda melanoleuca]
Length = 2294
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 107/203 (52%), Gaps = 17/203 (8%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLR--PYVFFDVIHGR 58
+LL QYR HP I + FY+G L + S + P+L P + F + G
Sbjct: 1902 VLLRTQYRCHPAISAISNDLFYEGNLMNGISETE-------RSPLLEWLPTLCFYNVKGL 1954
Query: 59 ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV 118
E + S+ NV EA F + L ++L + G+ +G+IT YK Q+ L H V
Sbjct: 1955 EQIERDN-SFHNVAEAAFTL----KLIQSLIASGIAGCMIGVITLYKSQMYKLCHLLGAV 2009
Query: 119 -LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWV 177
+ + K + ++TVDAFQG E+++II+SCVR VGF+ +RMNVALTR RR L +
Sbjct: 2010 DFDHPDIKAVQVSTVDAFQGAEKEIIILSCVRT--RQVGFIDSEKRMNVALTRGRRHLLI 2067
Query: 178 MGNAGALTQSDDWAALIADSKAR 200
+GN L ++ W +I + R
Sbjct: 2068 VGNLACLRKNRLWGRVIQHCEGR 2090
>gi|260949873|ref|XP_002619233.1| hypothetical protein CLUG_00392 [Clavispora lusitaniae ATCC 42720]
gi|238846805|gb|EEQ36269.1| hypothetical protein CLUG_00392 [Clavispora lusitaniae ATCC 42720]
Length = 1128
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 119/247 (48%), Gaps = 51/247 (20%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDV------- 54
+L QYRMHP I FP + FY G L D I D P P +F+D
Sbjct: 891 MLDTQYRMHPAISAFPRKKFYGGLLKDG---ITAADRTKPNIPA-NPVLFWDTCGKAREG 946
Query: 55 -IHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSM----GLGKVTVGIITPYKLQLK 109
+ R G ++Y N E ++++K L ++ G+ + +G+ITPY+ Q
Sbjct: 947 TVRARFREDNG-LTYANRGE-------IDYVEKVLTALIYEKGIERKDIGVITPYRGQRD 998
Query: 110 CLQHEF--RNVLNSE---------------EGK--------DLYINTVDAFQGQERDVII 144
+ +++N E E K D+ I ++DAFQG+E+D ++
Sbjct: 999 MMSSTLVKNDMINPEKVEVQIEVDRDDFFNESKPITIHMVSDIMIASIDAFQGREKDFLV 1058
Query: 145 MSCVRASNHG-VGFVADIRRMNVALTRARRALWVMGNAGALTQSDD-WAALIADSKARNC 202
MSCVR++ +GF+ D RRMNVALTRA+ L ++G+ L++SD W I KA NC
Sbjct: 1059 MSCVRSNEQNKIGFLNDARRMNVALTRAKYGLILIGDMECLSRSDPLWNEYIETLKANNC 1118
Query: 203 YMDMDSL 209
+ D+
Sbjct: 1119 ILTGDNF 1125
>gi|423278771|ref|ZP_17257685.1| hypothetical protein HMPREF1203_01902 [Bacteroides fragilis HMW
610]
gi|404585763|gb|EKA90367.1| hypothetical protein HMPREF1203_01902 [Bacteroides fragilis HMW
610]
Length = 656
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/205 (35%), Positives = 109/205 (53%), Gaps = 23/205 (11%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDS-----ESVINLPDEVYYKDPVLRPYVFFDVIH 56
LL +QYRMH I FPS FYQG L + ++ L + + D +
Sbjct: 453 LLKIQYRMHRSIMQFPSAWFYQGELEAAPEISHRGILELDTPINWIDTSEMDF------- 505
Query: 57 GRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVT-----VGIITPYKLQLKCL 111
E G S N EA L + L+ ++ +G +V G+I+PYK Q++ L
Sbjct: 506 -HEEFVGESFGRINKPEANL---LLQELENYIRKIGENRVAEECIDFGLISPYKAQVQYL 561
Query: 112 QHEFR-NVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALT 169
+++ + N + +NTVD FQGQERDVI +S VRA+ +G +GF+ D+RRMNVA+T
Sbjct: 562 RNKIKGNPFFRPYRNRITVNTVDGFQGQERDVIFISLVRANENGQIGFLNDLRRMNVAIT 621
Query: 170 RARRALWVMGNAGALTQSDDWAALI 194
RAR L ++G+A +++ + LI
Sbjct: 622 RARMKLVILGDATTMSKHAFYRKLI 646
>gi|449499590|ref|XP_002193830.2| PREDICTED: uncharacterized protein LOC100217537 [Taeniopygia guttata]
Length = 2134
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 112/198 (56%), Gaps = 19/198 (9%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLR--PYVFFDVIHGR 58
+LL QYR HP + + FY G L D S + + P+L P + F +HG
Sbjct: 1911 ILLRTQYRCHPALSAIANELFYDGNLIDGISEED-------RAPLLEWLPTLCFYSVHGM 1963
Query: 59 ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV 118
E + S+ N+ EA F V L ++L + G+ +G+IT YK Q+ +Q+ V
Sbjct: 1964 EQVERDN-SFYNMAEAHFTV----KLIQSLIASGIEGADIGVITLYKSQMYKIQNLLSGV 2018
Query: 119 LNSE--EGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALW 176
+SE E K + ++TVDAFQG ER++I++SCVR + +GF+ +RMNVALTRA+R L
Sbjct: 2019 -HSEAFEVKPVQVSTVDAFQGAEREIIVLSCVRTRH--LGFIDSEKRMNVALTRAKRHLL 2075
Query: 177 VMGNAGALTQSDDWAALI 194
++G+ L+++ W +I
Sbjct: 2076 IVGSLPCLSRNRLWGRVI 2093
>gi|167533295|ref|XP_001748327.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773139|gb|EDQ86782.1| predicted protein [Monosiga brevicollis MX1]
Length = 879
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/197 (39%), Positives = 105/197 (53%), Gaps = 24/197 (12%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLR-----PYVFFDVI 55
++L VQYRMHP I S FY+GRL +V +DP+LR P++++D
Sbjct: 525 VMLDVQYRMHPKICAIASNLFYEGRLETDPTVATR----RSRDPILRGTKESPFLWYDTP 580
Query: 56 HGRESH-----RGGSVSYQNVDEAKFGV-CLYEHLQKTLKSMGLG-KVTVGIITPYKLQL 108
E+ +GG SY NV EA+ + CL TL + LG + V I+TPY Q
Sbjct: 581 PETEAAMTRGGQGGPNSYINVREAEQVIQCLL-----TLCRIRLGLRNRVTIVTPYAAQR 635
Query: 109 KCLQHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVAL 168
C+ + + ++TVDA QGQE DVII S VR S +GF +D RR+NVAL
Sbjct: 636 NCISDHLTWAFG-KAANAVRVSTVDAMQGQESDVIIYSAVRTS--ALGFTSDRRRINVAL 692
Query: 169 TRARRALWVMGNAGALT 185
TRA+ L V+G+ LT
Sbjct: 693 TRAKTCLIVLGSKLLLT 709
>gi|303391232|ref|XP_003073846.1| putative DNA helicase [Encephalitozoon intestinalis ATCC 50506]
gi|303302994|gb|ADM12486.1| putative DNA helicase [Encephalitozoon intestinalis ATCC 50506]
Length = 779
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/195 (36%), Positives = 106/195 (54%), Gaps = 16/195 (8%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
+LSVQYRM + ++PS FY G L + + + + P FF V +GRE
Sbjct: 560 VLSVQYRMDADLCEWPSEMFYNGELLTG-------GKNFCRFDLGIPTNFFYVCYGREEV 612
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
S+ N EA + HL K G+ + +G+ITPY+ Q + + +
Sbjct: 613 SPSGTSFVNQAEALHCESIIRHLFKC----GVTENQIGVITPYEGQR---SYILNRIFGA 665
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVMGN 180
E G +L I+ VD FQG+E+D II+S VR++ + G+GFV D RRMNV LTRA+ L ++GN
Sbjct: 666 EPG-NLEISNVDGFQGREKDFIIVSLVRSNLYQGIGFVGDKRRMNVMLTRAKHGLVIIGN 724
Query: 181 AGALTQSDDWAALIA 195
L + D W+ L++
Sbjct: 725 PMTLMRHDMWSNLLS 739
>gi|294946503|ref|XP_002785099.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239898511|gb|EER16895.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 422
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 123/230 (53%), Gaps = 16/230 (6%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRL-TDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
LL VQ RMHP I +F + +FY+GRL ++ +P + V V D + G E+
Sbjct: 163 LLDVQRRMHPSIAEFSNINFYEGRLHSEVGERAKIPGLYWPASGVQVCLVNIDALSGGET 222
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQL----KCLQHEFR 116
G S+ N EAK + + + +K+ G+ +GI+ PY Q + L+ ++R
Sbjct: 223 RVG--TSFSNRAEAK---AVIDAMVVAVKA-GVEPGDIGIVVPYSGQKTQKERMLESDYR 276
Query: 117 NVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRAL 175
L E + + INTVDA QG ER++I+ S VR++ G +GF D RRMNV LTRA+R+L
Sbjct: 277 --LPRESVERISINTVDACQGSERELILFSAVRSNRDGDIGFTGDPRRMNVVLTRAKRSL 334
Query: 176 WVMGNAGALT--QSDDWAALIADSKARNCYMDMDSLPKEFSVALAAKAPG 223
V G+ L+ DWA + +K+ C ++M + +V A+ + G
Sbjct: 335 VVFGDVKTLSADTEGDWARWVHWAKSTGCMVEMAEYLRNSAVNGASGSAG 384
>gi|313148991|ref|ZP_07811184.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|424664802|ref|ZP_18101838.1| hypothetical protein HMPREF1205_00677 [Bacteroides fragilis HMW
616]
gi|313137758|gb|EFR55118.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|404575335|gb|EKA80078.1| hypothetical protein HMPREF1205_00677 [Bacteroides fragilis HMW
616]
Length = 656
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/205 (35%), Positives = 109/205 (53%), Gaps = 23/205 (11%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDS-----ESVINLPDEVYYKDPVLRPYVFFDVIH 56
LL +QYRMH I FPS FYQG L + ++ L + + D +
Sbjct: 453 LLKIQYRMHRSIMQFPSAWFYQGELEAAPEISHRGILELDTPINWIDTSEMDF------- 505
Query: 57 GRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVT-----VGIITPYKLQLKCL 111
E G S N EA L + L+ ++ +G +V G+I+PYK Q++ L
Sbjct: 506 -HEEFVGESFGRINKPEANL---LLQELENYIRKIGENRVAEECIDFGLISPYKAQVQYL 561
Query: 112 QHEFR-NVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALT 169
+++ + N + +NTVD FQGQERDVI +S VRA+ +G +GF+ D+RRMNVA+T
Sbjct: 562 RNKIKGNPFFRPYRSRITVNTVDGFQGQERDVIFISLVRANENGQIGFLNDLRRMNVAIT 621
Query: 170 RARRALWVMGNAGALTQSDDWAALI 194
RAR L ++G+A +++ + LI
Sbjct: 622 RARMKLVILGDATTMSKHAFYRKLI 646
>gi|403223698|dbj|BAM41828.1| tRNA-splicing endonuclease [Theileria orientalis strain Shintoku]
Length = 798
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 110/219 (50%), Gaps = 31/219 (14%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
L +QYRM P I FPS +FYQ +L +++ ++ P+E + + P+ RP VFF + +SH
Sbjct: 526 FLKLQYRMDPLITRFPSMYFYQNQLINAKKSLSKPEEDWRQFPLFRPTVFFAI----DSH 581
Query: 62 RG-GSVSYQNVDEAKFGVCLYEHLQKTLKSM-GLGKV----TVGIITPYKLQLKCLQHEF 115
SY N E L E L + + ++ G+ + +I+PY Q + L+
Sbjct: 582 ESRNDTSYVNEMEVDLVCQLLEMLIEIMSTIPGITAEEIARKIAVISPYAAQAEILKSTI 641
Query: 116 ---------RNV-----LNSEEGKDLYINTVDAFQGQERDVIIMSCVR-------ASNHG 154
NV + + +Y++TVD FQG E+D+II S VR A+
Sbjct: 642 SQRIKINPQTNVPDYSKITPSKTNQIYVSTVDGFQGMEKDIIIFSAVRTNYVDLTANVID 701
Query: 155 VGFVADIRRMNVALTRARRALWVMGNAGALTQSDDWAAL 193
F+AD RR+NVA+TRA L ++GN L W+AL
Sbjct: 702 ASFIADRRRINVAITRACSNLLIVGNPRYLLDHKHWSAL 740
>gi|198435823|ref|XP_002122130.1| PREDICTED: similar to regulator of nonsense transcripts 1 [Ciona
intestinalis]
Length = 1094
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/174 (39%), Positives = 96/174 (55%), Gaps = 8/174 (4%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESV-INLPDEVYYKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + FPS FY+G L + + + + + P +FF G+E
Sbjct: 689 LQVQYRMHPALSAFPSNIFYEGSLQNGVTAGERMRKNLSFVWPSPDKPMFFYKTSGQEEI 748
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVL 119
SY N EA + E + G+ +GIITPY+ Q L ++ L
Sbjct: 749 ASSGTSYLNRTEA----AVVERITTKFLKSGIKPEQIGIITPYEGQRSYLVQYMQYSGSL 804
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRAR 172
+S+ ++ I +VDAFQG+E+D II+SCVRA+ H G+GF+ D RR+NVALTRAR
Sbjct: 805 HSKLYMEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAR 858
>gi|390605116|gb|EIN14507.1| P-loop containing nucleoside triphosphate hydrolase protein
[Punctularia strigosozonata HHB-11173 SS5]
Length = 778
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 106/198 (53%), Gaps = 23/198 (11%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-----LPDEVYYK-----DPVLRPYVF 51
+L +QYRMH HI FPS+ Y +L +V N LP+ + D + P VF
Sbjct: 564 MLRIQYRMHAHINAFPSKTLYSNKLIPHPTVANHLLRDLPNIATSENDLDLDALETPVVF 623
Query: 52 FDVI----HGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQ 107
FD H R G S N +EA + +H +TL G+ + I+TPY+ Q
Sbjct: 624 FDTAGCEYHERTDGDGDEGSKCNENEA----SVVKHWVETLVGAGILPDQIAIVTPYQAQ 679
Query: 108 LKCLQHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRA-SNHGVGFVADIRRMNV 166
++ L +VL G DL I ++D QG+E++ +I++ VR+ S VGF+ + RR+NV
Sbjct: 680 VQLLT----SVLRPTFGSDLEIGSIDGMQGREKEAVIITLVRSNSKREVGFLKEKRRLNV 735
Query: 167 ALTRARRALWVMGNAGAL 184
A+TRA+R L V+G++ +
Sbjct: 736 AMTRAKRHLCVVGDSSTV 753
>gi|149698446|ref|XP_001502734.1| PREDICTED: hypothetical protein LOC100072675 [Equus caballus]
Length = 2124
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 106/203 (52%), Gaps = 17/203 (8%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLR--PYVFFDVIHGR 58
+LL QYR HP I + FY+G L + S + P+L P + F + G
Sbjct: 1886 VLLRTQYRCHPAISAIANDLFYEGNLINGVSETE-------RSPLLEWLPTLCFYNVKGL 1938
Query: 59 ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV 118
E + S+ NV EA F + L + +L + G+ +G+IT YK Q+ L H V
Sbjct: 1939 EQIERDN-SFHNVAEAAFTLKLIQ----SLIASGISGSLIGVITLYKSQMYKLCHLLSAV 1993
Query: 119 -LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWV 177
+ K + ++TVDAFQG E+++II+SCVR VGF+ +RMNVALTR RR L +
Sbjct: 1994 DFDHPHLKAVQVSTVDAFQGAEKEIIILSCVRTRQ--VGFIDSEKRMNVALTRGRRHLLI 2051
Query: 178 MGNAGALTQSDDWAALIADSKAR 200
+GN L ++ W +I + R
Sbjct: 2052 VGNLACLRKNRLWGRVIQHCEGR 2074
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.135 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,218,416,997
Number of Sequences: 23463169
Number of extensions: 270651154
Number of successful extensions: 574458
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2023
Number of HSP's successfully gapped in prelim test: 3669
Number of HSP's that attempted gapping in prelim test: 561430
Number of HSP's gapped (non-prelim): 6840
length of query: 371
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 227
effective length of database: 8,980,499,031
effective search space: 2038573280037
effective search space used: 2038573280037
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 77 (34.3 bits)