Query 047961
Match_columns 280
No_of_seqs 120 out of 204
Neff 6.0
Searched_HMMs 29240
Date Mon Mar 25 08:11:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047961.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047961hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gqb_A Protein arginine N-meth 100.0 2.1E-70 7E-75 553.0 24.5 257 1-265 4-273 (637)
2 3ua3_A Protein arginine N-meth 100.0 3.5E-64 1.2E-68 509.1 21.3 245 14-262 50-311 (745)
3 1qtw_A Endonuclease IV; DNA re 95.6 0.21 7.3E-06 43.3 13.3 194 16-226 3-220 (285)
4 3aal_A Probable endonuclease 4 95.6 0.063 2.2E-06 47.8 10.0 191 16-227 7-223 (303)
5 2x7v_A Probable endonuclease 4 94.2 0.12 4E-06 45.0 7.5 192 17-226 4-219 (287)
6 3aam_A Endonuclease IV, endoiv 93.1 0.39 1.3E-05 41.6 8.9 185 16-227 3-209 (270)
7 3ayv_A Putative uncharacterize 90.6 1.6 5.5E-05 37.2 9.9 163 25-226 10-191 (254)
8 3kws_A Putative sugar isomeras 90.3 3.3 0.00011 35.9 11.8 219 12-261 23-264 (287)
9 3ktc_A Xylose isomerase; putat 87.7 1 3.6E-05 40.5 6.7 210 25-260 33-272 (333)
10 2j6v_A UV endonuclease, UVDE; 87.4 0.8 2.7E-05 41.7 5.8 156 86-262 119-293 (301)
11 1i60_A IOLI protein; beta barr 86.4 11 0.00038 31.9 12.4 179 25-227 14-205 (278)
12 3m0m_A L-rhamnose isomerase; b 86.2 3 0.0001 40.1 9.3 147 95-251 145-311 (438)
13 2hk0_A D-psicose 3-epimerase; 81.5 5.8 0.0002 34.8 8.6 218 14-261 20-266 (309)
14 1a0c_A Xylose isomerase; ketol 80.2 6.4 0.00022 37.7 8.9 126 96-226 154-299 (438)
15 3ngf_A AP endonuclease, family 78.4 30 0.001 29.4 13.1 220 12-263 9-251 (269)
16 3cqj_A L-ribulose-5-phosphate 77.9 4 0.00014 35.5 6.2 221 11-260 13-263 (295)
17 3qxb_A Putative xylose isomera 77.3 2.8 9.6E-05 37.1 5.1 193 15-227 20-249 (316)
18 2qul_A D-tagatose 3-epimerase; 76.7 8.3 0.00028 33.1 7.9 212 25-262 17-249 (290)
19 3tva_A Xylose isomerase domain 75.9 9.9 0.00034 32.8 8.2 187 12-229 8-218 (290)
20 3vni_A Xylose isomerase domain 70.7 20 0.0007 30.7 9.0 203 25-259 17-245 (294)
21 2zvr_A Uncharacterized protein 69.4 26 0.0009 30.1 9.4 203 26-260 42-264 (290)
22 2g0w_A LMO2234 protein; putati 67.0 62 0.0021 27.9 12.0 184 13-226 21-214 (296)
23 2zds_A Putative DNA-binding pr 66.5 33 0.0011 30.0 9.6 117 100-227 102-241 (340)
24 1k77_A EC1530, hypothetical pr 61.9 50 0.0017 27.5 9.6 156 98-262 74-243 (260)
25 1bxb_A Xylose isomerase; xylos 60.7 17 0.00058 33.4 6.7 125 95-226 102-248 (387)
26 3dx5_A Uncharacterized protein 57.3 76 0.0026 26.8 10.1 117 99-227 74-203 (286)
27 3cny_A Inositol catabolism pro 57.0 32 0.0011 29.4 7.6 115 100-226 81-220 (301)
28 1p7a_A BF3, BKLF, kruppel-like 56.1 4.6 0.00016 23.2 1.3 19 259-277 7-25 (37)
29 2elr_A Zinc finger protein 406 54.8 4.9 0.00017 22.8 1.3 19 259-277 5-23 (36)
30 3qc0_A Sugar isomerase; TIM ba 53.4 15 0.00053 31.0 4.8 186 16-226 6-208 (275)
31 2elx_A Zinc finger protein 406 52.4 4.1 0.00014 23.0 0.7 17 260-276 4-20 (35)
32 1fv5_A First zinc finger of U- 52.2 2.6 8.8E-05 26.1 -0.3 18 259-276 4-21 (36)
33 1xim_A D-xylose isomerase; iso 51.9 22 0.00074 32.8 5.9 124 95-226 102-248 (393)
34 1xla_A D-xylose isomerase; iso 50.6 17 0.00057 33.6 4.9 125 95-225 102-247 (394)
35 1srk_A Zinc finger protein ZFP 49.4 4.7 0.00016 22.8 0.6 18 260-277 4-21 (35)
36 2m0e_A Zinc finger and BTB dom 47.2 5.9 0.0002 20.9 0.7 14 264-277 3-16 (29)
37 2elm_A Zinc finger protein 406 46.7 4.4 0.00015 23.6 0.1 18 260-277 6-23 (37)
38 2qw5_A Xylose isomerase-like T 46.5 19 0.00066 31.9 4.5 225 15-262 9-284 (335)
39 2elo_A Zinc finger protein 406 46.3 5 0.00017 23.1 0.3 19 259-277 5-23 (37)
40 2kvh_A Zinc finger and BTB dom 45.8 6.3 0.00022 20.8 0.7 13 264-276 4-16 (27)
41 2elt_A Zinc finger protein 406 45.4 6.2 0.00021 22.4 0.7 18 260-277 6-23 (36)
42 2elp_A Zinc finger protein 406 45.3 6.1 0.00021 22.7 0.7 18 259-276 5-22 (37)
43 2kvf_A Zinc finger and BTB dom 45.3 6.4 0.00022 20.8 0.7 13 264-276 4-16 (28)
44 2elv_A Zinc finger protein 406 44.7 6.3 0.00022 22.5 0.6 18 260-277 6-23 (36)
45 1znf_A 31ST zinc finger from X 44.0 7.3 0.00025 20.3 0.8 14 264-277 2-15 (27)
46 1rik_A E6APC1 peptide; E6-bind 43.8 6.4 0.00022 20.9 0.5 14 264-277 3-16 (29)
47 3obe_A Sugar phosphate isomera 43.7 86 0.0029 27.4 8.3 222 13-254 19-271 (305)
48 1ard_A Yeast transcription fac 43.6 7.2 0.00025 20.6 0.7 13 264-276 3-15 (29)
49 1jx7_A Hypothetical protein YC 43.3 16 0.00056 27.1 3.0 48 215-262 33-81 (117)
50 2ytb_A Zinc finger protein 32; 43.3 9.4 0.00032 22.5 1.3 19 259-277 7-25 (42)
51 2elq_A Zinc finger protein 406 43.1 7.1 0.00024 22.3 0.7 17 260-276 6-22 (36)
52 1njq_A Superman protein; zinc- 42.9 6.9 0.00024 22.9 0.6 18 260-277 3-20 (39)
53 3u0h_A Xylose isomerase domain 42.0 1.5E+02 0.0052 24.7 10.3 189 17-228 6-211 (281)
54 1paa_A Yeast transcription fac 41.8 7 0.00024 20.9 0.5 14 264-277 3-16 (30)
55 2lvu_A Zinc finger and BTB dom 47.7 5.5 0.00019 20.9 0.0 14 264-277 3-16 (26)
56 1klr_A Zinc finger Y-chromosom 41.5 7.6 0.00026 20.6 0.6 14 264-277 3-16 (30)
57 2kvg_A Zinc finger and BTB dom 41.3 6 0.0002 21.1 0.1 14 264-277 4-17 (27)
58 2yte_A Zinc finger protein 473 40.6 11 0.00037 22.2 1.3 18 259-276 6-23 (42)
59 2eos_A B-cell lymphoma 6 prote 39.9 11 0.00038 22.2 1.3 19 259-277 7-25 (42)
60 2enf_A Zinc finger protein 347 39.7 12 0.0004 22.7 1.4 19 259-277 8-26 (46)
61 2m0d_A Zinc finger and BTB dom 39.6 8.6 0.00029 20.3 0.6 13 264-276 4-16 (30)
62 2els_A Zinc finger protein 406 39.5 6.7 0.00023 22.3 0.2 18 260-277 6-23 (36)
63 1rim_A E6APC2 peptide; E6-bind 39.5 10 0.00035 21.4 1.0 13 264-276 3-15 (33)
64 2en7_A Zinc finger protein 268 39.5 12 0.0004 22.3 1.3 19 259-277 8-26 (44)
65 2kfq_A FP1; protein, de novo p 39.2 9.4 0.00032 21.3 0.8 14 264-277 3-16 (32)
66 2yti_A Zinc finger protein 347 39.2 12 0.0004 22.6 1.3 18 259-276 8-25 (46)
67 1muw_A Xylose isomerase; atomi 38.4 33 0.0011 31.4 4.8 123 95-225 102-247 (386)
68 2eoh_A Zinc finger protein 28 38.2 13 0.00044 22.5 1.4 19 259-277 8-26 (46)
69 2m0f_A Zinc finger and BTB dom 37.7 9.8 0.00033 20.0 0.7 13 264-276 3-15 (29)
70 2eom_A ZFP-95, zinc finger pro 37.7 13 0.00046 22.5 1.4 18 259-276 8-25 (46)
71 2epv_A Zinc finger protein 268 37.6 9.4 0.00032 23.0 0.7 18 259-276 8-25 (44)
72 2el5_A Zinc finger protein 268 37.6 9.2 0.00031 22.6 0.6 19 259-277 6-24 (42)
73 2eq2_A Zinc finger protein 347 37.5 13 0.00045 22.4 1.4 19 259-277 8-26 (46)
74 2ept_A Zinc finger protein 32; 37.4 9.5 0.00033 22.4 0.6 18 259-276 6-23 (41)
75 2eq1_A Zinc finger protein 347 37.1 13 0.00046 22.4 1.3 18 259-276 8-25 (46)
76 2em6_A Zinc finger protein 224 36.9 14 0.00046 22.4 1.3 19 259-277 8-26 (46)
77 2emg_A Zinc finger protein 484 36.5 14 0.00047 22.3 1.3 18 259-276 8-25 (46)
78 2eou_A Zinc finger protein 473 36.4 13 0.00046 22.2 1.2 18 259-276 8-25 (44)
79 2yth_A Zinc finger protein 224 36.4 14 0.00049 22.3 1.4 19 259-277 8-26 (46)
80 2ep1_A Zinc finger protein 484 36.3 14 0.00048 22.2 1.3 19 259-277 8-26 (46)
81 2enh_A Zinc finger protein 28 36.2 14 0.00048 22.3 1.3 19 259-277 8-26 (46)
82 2epc_A Zinc finger protein 32; 36.0 10 0.00035 22.3 0.6 19 259-277 7-25 (42)
83 2en2_A B-cell lymphoma 6 prote 36.0 10 0.00035 22.4 0.6 19 259-277 7-25 (42)
84 2lvt_A Zinc finger and BTB dom 42.1 7.7 0.00026 20.7 0.0 14 264-277 3-16 (29)
85 2emz_A ZFP-95, zinc finger pro 35.4 15 0.0005 22.2 1.3 18 259-276 8-25 (46)
86 2eon_A ZFP-95, zinc finger pro 35.1 15 0.0005 22.3 1.3 18 259-276 8-25 (46)
87 2yrm_A B-cell lymphoma 6 prote 34.6 15 0.00052 21.9 1.3 18 259-276 6-23 (43)
88 2en9_A Zinc finger protein 28 34.5 15 0.00052 22.2 1.3 19 259-277 8-26 (46)
89 2lvr_A Zinc finger and BTB dom 40.5 8.4 0.00029 20.5 0.0 14 264-277 4-17 (30)
90 2eoq_A Zinc finger protein 224 33.9 16 0.00055 22.0 1.3 19 259-277 8-26 (46)
91 2ytq_A Zinc finger protein 268 33.7 16 0.00055 22.1 1.3 19 259-277 8-26 (46)
92 2eof_A Zinc finger protein 268 33.7 11 0.00038 22.4 0.5 19 259-277 8-26 (44)
93 2emi_A Zinc finger protein 484 33.6 11 0.00039 22.7 0.6 19 259-277 8-26 (46)
94 3iuf_A Zinc finger protein UBI 33.6 8.9 0.0003 24.0 0.0 19 259-277 3-21 (48)
95 2ytr_A Zinc finger protein 347 33.6 16 0.00054 21.9 1.2 18 259-276 8-25 (46)
96 2emk_A Zinc finger protein 28 33.5 16 0.00056 22.0 1.3 19 259-277 8-26 (46)
97 1yui_A GAGA-factor; complex (D 33.5 10 0.00035 24.1 0.3 18 259-276 20-37 (54)
98 3l23_A Sugar phosphate isomera 33.4 1.4E+02 0.0049 25.8 8.1 122 102-225 101-245 (303)
99 2ytn_A Zinc finger protein 347 33.3 16 0.00055 22.0 1.3 18 259-276 8-25 (46)
100 2eop_A Zinc finger protein 268 33.1 17 0.00057 21.8 1.3 19 259-277 8-26 (46)
101 2epx_A Zinc finger protein 28 33.0 17 0.00059 21.8 1.4 18 259-276 8-25 (47)
102 2emj_A Zinc finger protein 28 32.6 13 0.00044 22.5 0.7 18 259-276 8-25 (46)
103 2yts_A Zinc finger protein 484 32.6 13 0.00043 22.4 0.6 19 259-277 8-26 (46)
104 2eow_A Zinc finger protein 347 32.6 12 0.00042 22.5 0.6 19 259-277 8-26 (46)
105 2ely_A Zinc finger protein 224 32.5 18 0.00061 21.8 1.4 19 259-277 8-26 (46)
106 2eov_A Zinc finger protein 484 32.5 17 0.00059 21.8 1.3 18 259-276 8-25 (46)
107 2epz_A Zinc finger protein 28 32.5 17 0.0006 21.8 1.3 18 259-276 8-25 (46)
108 2eq4_A Zinc finger protein 224 32.4 16 0.00056 21.9 1.2 19 259-277 8-26 (46)
109 2em0_A Zinc finger protein 224 32.4 18 0.00062 21.7 1.4 19 259-277 8-26 (46)
110 2ytp_A Zinc finger protein 484 32.1 13 0.00044 22.5 0.6 18 259-276 8-25 (46)
111 2yu5_A Zinc finger protein 473 32.1 13 0.00044 22.2 0.6 18 259-276 8-25 (44)
112 2ytf_A Zinc finger protein 268 31.9 13 0.00045 22.3 0.7 18 259-276 8-25 (46)
113 2eoj_A Zinc finger protein 268 31.5 11 0.00039 22.4 0.3 19 259-277 8-26 (44)
114 2em4_A Zinc finger protein 28 31.5 14 0.00047 22.4 0.7 19 259-277 8-26 (46)
115 2emb_A Zinc finger protein 473 31.5 13 0.00046 22.1 0.6 19 259-277 8-26 (44)
116 2elz_A Zinc finger protein 224 31.3 19 0.00066 21.7 1.4 19 259-277 8-26 (46)
117 2yrj_A Zinc finger protein 473 31.0 14 0.00047 22.2 0.6 18 259-276 8-25 (46)
118 2eoy_A Zinc finger protein 473 31.0 14 0.00047 22.4 0.6 18 259-276 8-25 (46)
119 2eq3_A Zinc finger protein 347 30.9 12 0.00042 22.5 0.4 18 259-276 8-25 (46)
120 2epw_A Zinc finger protein 268 30.6 14 0.00049 22.2 0.7 18 259-276 8-25 (46)
121 2ytm_A Zinc finger protein 28 30.3 19 0.00066 21.7 1.2 18 259-276 8-25 (46)
122 2emx_A Zinc finger protein 268 30.2 14 0.00049 22.0 0.6 19 259-277 6-24 (44)
123 2en3_A ZFP-95, zinc finger pro 30.2 15 0.0005 22.2 0.7 18 259-276 8-25 (46)
124 2el4_A Zinc finger protein 268 30.1 15 0.00051 22.1 0.7 19 259-277 8-26 (46)
125 2yu8_A Zinc finger protein 347 30.0 15 0.00052 22.1 0.7 19 259-277 8-26 (46)
126 2eor_A Zinc finger protein 224 29.9 14 0.00048 22.2 0.5 18 259-276 8-25 (46)
127 2em3_A Zinc finger protein 28 29.7 15 0.0005 22.2 0.6 19 259-277 8-26 (46)
128 2ep3_A Zinc finger protein 484 29.7 15 0.0005 22.2 0.6 19 259-277 8-26 (46)
129 2q02_A Putative cytoplasmic pr 29.6 2.4E+02 0.0082 23.3 12.0 185 15-225 7-200 (272)
130 2ytt_A Zinc finger protein 473 29.6 21 0.00071 21.5 1.3 18 259-276 8-25 (46)
131 2em2_A Zinc finger protein 28 29.6 15 0.00052 22.1 0.7 18 259-276 8-25 (46)
132 2yto_A Zinc finger protein 484 29.2 15 0.00053 22.1 0.6 19 259-277 8-26 (46)
133 2ytj_A Zinc finger protein 484 29.0 15 0.00052 22.1 0.6 19 259-277 8-26 (46)
134 2lv2_A Insulinoma-associated p 29.0 15 0.00051 26.7 0.6 17 260-276 25-41 (85)
135 2eoo_A ZFP-95, zinc finger pro 29.0 15 0.00052 22.2 0.6 19 259-277 8-26 (46)
136 2eml_A Zinc finger protein 28 28.6 16 0.00054 22.0 0.6 18 259-276 8-25 (46)
137 2ene_A Zinc finger protein 347 28.5 17 0.00057 21.9 0.7 19 259-277 8-26 (46)
138 2emf_A Zinc finger protein 484 28.5 16 0.00054 22.1 0.6 19 259-277 8-26 (46)
139 2eox_A Zinc finger protein 473 28.2 13 0.00043 22.3 0.1 19 259-277 8-26 (44)
140 2ytk_A Zinc finger protein 347 28.2 16 0.00056 22.0 0.6 19 259-277 8-26 (46)
141 2enc_A Zinc finger protein 224 28.0 17 0.00058 21.9 0.7 19 259-277 8-26 (46)
142 2en8_A Zinc finger protein 224 28.0 17 0.00057 21.8 0.6 18 259-276 8-25 (46)
143 2ema_A Zinc finger protein 347 28.0 15 0.00052 22.1 0.4 19 259-277 8-26 (46)
144 2em9_A Zinc finger protein 224 27.9 17 0.00058 21.8 0.7 18 259-276 8-25 (46)
145 2em7_A Zinc finger protein 224 27.8 17 0.00057 21.9 0.6 18 259-276 8-25 (46)
146 2emy_A Zinc finger protein 268 27.8 17 0.00058 21.9 0.6 19 259-277 8-26 (46)
147 2ep2_A Zinc finger protein 484 27.7 17 0.00057 21.9 0.6 19 259-277 8-26 (46)
148 2eps_A POZ-, at HOOK-, and zin 27.6 23 0.0008 22.3 1.3 16 259-274 37-52 (54)
149 2emh_A Zinc finger protein 484 27.4 17 0.00057 21.9 0.5 19 259-277 8-26 (46)
150 2eq0_A Zinc finger protein 347 27.3 15 0.00053 22.1 0.3 19 259-277 8-26 (46)
151 2emm_A ZFP-95, zinc finger pro 27.0 17 0.0006 21.7 0.6 18 259-276 8-25 (46)
152 2el6_A Zinc finger protein 268 27.0 18 0.00063 21.8 0.7 18 259-276 8-25 (46)
153 2em5_A ZFP-95, zinc finger pro 26.8 18 0.00063 21.8 0.7 18 259-276 8-25 (46)
154 2ct7_A Ring finger protein 31; 26.8 17 0.0006 26.5 0.6 15 262-276 42-56 (86)
155 3fxt_A Nucleoside diphosphate- 26.7 78 0.0027 24.7 4.4 41 123-163 32-80 (113)
156 4gzn_C ZFP-57, zinc finger pro 26.6 15 0.00052 24.8 0.3 19 259-277 28-46 (60)
157 2eoe_A Zinc finger protein 347 26.5 16 0.00056 21.9 0.4 18 259-276 8-25 (46)
158 2ytg_A ZFP-95, zinc finger pro 26.5 18 0.0006 21.8 0.5 19 259-277 8-26 (46)
159 2em8_A Zinc finger protein 224 26.4 19 0.00064 21.7 0.6 18 259-276 8-25 (46)
160 2ytd_A Zinc finger protein 473 26.4 19 0.00064 21.6 0.7 19 259-277 8-26 (46)
161 2epu_A Zinc finger protein 32; 26.3 14 0.00049 22.2 0.1 18 259-276 8-25 (45)
162 2eoz_A Zinc finger protein 473 26.3 14 0.00048 22.3 0.0 19 259-277 8-26 (46)
163 2eme_A Zinc finger protein 473 26.2 19 0.00065 21.5 0.7 18 259-276 8-25 (46)
164 2emp_A Zinc finger protein 347 26.1 19 0.00064 21.7 0.6 19 259-277 8-26 (46)
165 2yso_A ZFP-95, zinc finger pro 25.4 19 0.00064 21.6 0.5 18 259-276 8-25 (46)
166 2epq_A POZ-, at HOOK-, and zin 25.3 17 0.00059 21.8 0.3 19 259-277 6-24 (45)
167 2en1_A Zinc finger protein 224 25.1 16 0.00054 22.0 0.1 19 259-277 8-26 (46)
168 2en6_A Zinc finger protein 268 24.3 16 0.00056 21.9 0.1 18 259-276 8-25 (46)
169 2ysp_A Zinc finger protein 224 23.9 17 0.00057 21.9 0.0 18 259-276 8-25 (46)
170 2ep0_A Zinc finger protein 28 23.1 21 0.00073 21.4 0.4 18 259-276 8-25 (46)
171 2jmo_A Parkin; IBR, E3 ligase, 21.8 36 0.0012 24.5 1.5 17 260-276 42-63 (80)
172 1vd4_A Transcription initiatio 21.6 22 0.00075 23.4 0.3 15 260-274 11-25 (62)
173 3uk3_C Zinc finger protein 217 21.2 30 0.001 21.5 0.9 11 264-274 5-15 (57)
No 1
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=100.00 E-value=2.1e-70 Score=552.97 Aligned_cols=257 Identities=33% Similarity=0.647 Sum_probs=224.4
Q ss_pred CCCCCCCCCCCCCceeeecccCCCCChHHHHHhhhccCCCcEEEeccCCCCCCCccccccCCCCCCCCCCCCCCcccCCC
Q 047961 1 MALGERGGWDKSESRYCGVETDFNDDMPHLLSFNLSSGGFDFVVASLMDPNYRPSLMEKDIGGGSHVLSFAGSDLVLSPS 80 (280)
Q Consensus 1 m~~~~~~~~~~~~~~~~G~~~~~~~dl~~~l~~a~~~~gydfv~~PIt~~~~~~~~~~~d~~~~~~~~p~~~sD~~L~~~ 80 (280)
|+++...| .+++||+++++++|+.++++.|. +.|||||++|||||+||++...+ ....+.+||+++|+.|+++
T Consensus 4 ~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~a~-~~g~d~v~~pi~~~~~~~~~~~~--~~~~~~~p~~~~d~~l~~~ 76 (637)
T 4gqb_A 4 MAVGGAGG----SRVSSGRDLNCVPEIADTLGAVA-KQGFDFLCMPVFHPRFKREFIQE--PAKNRPGPQTRSDLLLSGR 76 (637)
T ss_dssp -------------CCCEEEECSCCSSHHHHHHHHH-HTTCSEEEEESSCTTCCCCSSST--TGGGCCSCSSCCGGGSCHH
T ss_pred cccCcCCC----CceEEEeeccCCccHHHHHHHHH-HCCCCEEEeccCChhhhhHHhhc--ccccCCCCCCccceeeCcc
Confidence 55555554 78999999999999999999999 99999999999999999985421 1223577999999999999
Q ss_pred CCcceEEEEecCCCCCCCccHHHHHhHHHHHHHHHHHHhhcCcceeeecCCCCCChhHHHHHHHHHHhhcCc-ceEEEEE
Q 047961 81 QWSSHVVGKISSWIDLDSEDEILRMDSETTLKQEISWASHLSLQACLLPSPKGASCANYARCVNQILQSLNN-MQLWLRI 159 (280)
Q Consensus 81 ~w~s~vVg~~S~WidlDS~d~~ir~~S~~~L~~El~yA~~lgl~aviip~P~~~~~~~yAr~i~~~l~~~~~-~~iwI~l 159 (280)
+|+++|||++|+||||||+||.+|..||++|++||+||+|||+++||||+|+ .+++||||+|++.++..++ .++||+|
T Consensus 77 ~~~~~vvg~~S~wi~~ds~~~~~~~~s~~~l~~El~~a~~~g~~~~iip~~~-~~~~~~ar~i~~~l~~~~~~~~~~i~~ 155 (637)
T 4gqb_A 77 DWNTLIVGKLSPWIRPDSKVEKIRRNSEAAMLQELNFGAYLGLPAFLLPLNQ-EDNTNLARVLTNHIHTGHHSSMFWMRV 155 (637)
T ss_dssp HHHHHEEEECCTTCCTTCSSHHHHHHHHHHHHHHHHHHHHHTCSEEEEECCS-SCCHHHHHHHHHHHTSSCCCCEEEEEE
T ss_pred cccceEEEEECCCcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCEEEECCCC-ccchHHHHHHHHHHhcCCCceeEEEEE
Confidence 9999999999999999999999999999999999999999999999999974 5789999999999976555 5699999
Q ss_pred ecccCCC---CCCCC---------CCCCChHHHHHHHHHHhcCCCccEEEEEccCCCCChhhhhhhcccCceEEEEeCCc
Q 047961 160 PLVKNDD---DTMDF---------IPSGDSWELWNSFRLLCEHHSQLSVALDVLSSLPSANSLGRWLGEPVRAAIIHTDS 227 (280)
Q Consensus 160 P~~~~~~---~~~~~---------~~~~~~W~~Wn~iR~lc~y~~~L~VaL~l~~~lP~~~~~~RWl~EPV~~lii~ts~ 227 (280)
||+.+.. +..+. ++..++|++||+||++|+||+||+|+|+|++++|+.++++||+||||+|++|++++
T Consensus 156 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~W~~~r~~c~~~~~l~v~L~l~~~~p~~~~~~rW~~EPv~~l~i~~~~ 235 (637)
T 4gqb_A 156 PLVAPEDLRDDIIENAPTTHTEEYSGEEKTWMWWHNFRTLCDYSKRIAVALEIGADLPSNHVIDRWLGEPIKAAILPTSI 235 (637)
T ss_dssp ESSCHHHHCCSCBTTSCCCCSCCTTGGGHHHHHHHHHHHHTTTCTTEEEEEECCSSCCCHHHHHTTTTSCEEEEEEEGGG
T ss_pred EccCCccccccccccccccccccccCcccHHHHHHHHHHHhCCCCceEEEEEcCCCCCCHHHHHHHhcCCeeEEEEchhh
Confidence 9986521 11110 01457999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCcccCHHHHHHHHHHHhcCceEEEeccCCCC
Q 047961 228 FLTNARGYPCLSRRHQKLITGFLNHSIQVVISGKLNQW 265 (280)
Q Consensus 228 F~tN~kGyPVLsK~hQ~~i~~~~r~~~~iil~g~~~~~ 265 (280)
|++|+||||||+|+||+||++|||+++++||+|..+|.
T Consensus 236 F~~n~~g~pvL~k~hq~~i~~~~~~~~~~il~~~~~~~ 273 (637)
T 4gqb_A 236 FLTNKKGFPVLSKMHQRLIFRLLKLEVQFIITGTNHHS 273 (637)
T ss_dssp CEECTTSCEECCHHHHHHHHHHHHTTCEEEEESCCSSG
T ss_pred cccCCCCCcCCCHHHHHHHHHHHhCCCeEEEecCCccC
Confidence 99999999999999999999999999999999998886
No 2
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=100.00 E-value=3.5e-64 Score=509.11 Aligned_cols=245 Identities=24% Similarity=0.370 Sum_probs=214.0
Q ss_pred ceeeecccC-------CCCChHHHHHhhhccCCCcEEEeccCCCCCCCccccccCCCCCCCCCCCCCCcccCCCCCcceE
Q 047961 14 SRYCGVETD-------FNDDMPHLLSFNLSSGGFDFVVASLMDPNYRPSLMEKDIGGGSHVLSFAGSDLVLSPSQWSSHV 86 (280)
Q Consensus 14 ~~~~G~~~~-------~~~dl~~~l~~a~~~~gydfv~~PIt~~~~~~~~~~~d~~~~~~~~p~~~sD~~L~~~~w~s~v 86 (280)
+..+|+-.. .-.++....+.+. +.|||||++||+|| ++.........+.++|||+++|+.|++++|+++|
T Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~fv~~pi~~~--~r~~~~~~~~~~~~~~~~~~~d~~l~~~~w~~~v 126 (745)
T 3ua3_A 50 RIHIGWMATTLDVAENLDRHVATFCTRLG-EFKYNFVVYPIGGV--VRAFWTPNGSAENHPPVIDLPDVQLRNDLWESYV 126 (745)
T ss_dssp TCCEEEECCTTSCCTTTTTTHHHHHHHHH-HTTCCCEECBTTCH--HHHTCCCCSCTTCCCCCCCCCSTTSCHHHHHHTB
T ss_pred eeEEEEecccccccccccccHHHHHHHHH-hCCCCEEEeecCCC--cccccccccccccCCCCCCHHHcccChhhccceE
Confidence 456676542 2256778888888 99999999999999 3332110012335689999999999999999999
Q ss_pred EEEecCCCCCCCccHHHHHhHHHHHHHHHHHHhhcCcceeeecCCCCCChhHHHHHHHHHHhh-cCcceEEEEEecccCC
Q 047961 87 VGKISSWIDLDSEDEILRMDSETTLKQEISWASHLSLQACLLPSPKGASCANYARCVNQILQS-LNNMQLWLRIPLVKND 165 (280)
Q Consensus 87 Vg~~S~WidlDS~d~~ir~~S~~~L~~El~yA~~lgl~aviip~P~~~~~~~yAr~i~~~l~~-~~~~~iwI~lP~~~~~ 165 (280)
||++|+||||||+||.+|..|+++|++||+||+|||+++||||+ ++.++++|||+|++++++ .+++++||+|||+.+.
T Consensus 127 ig~~S~WidldS~d~~~~~~S~~~L~~El~yA~~lg~~~viip~-~~~~~~~yAr~i~~~l~~~~~~~~~~i~lP~~~e~ 205 (745)
T 3ua3_A 127 VGKISPWIDCDSSDPAFASLSEEHLLKELSYICYLGLQTMAIEL-TRISSPRTAAILKKWIWTRNSRFTVWVQLPSAIEK 205 (745)
T ss_dssp CEECCTTCCTTCSSHHHHHHHHHHHHHHHHHHHHTTCSEEEEEC-CSSCCHHHHHHHHHHHHHCSCCCEEEEECCSSGGG
T ss_pred EEEecCcccCCCCCHHHHHHHHHHHHHHHHHHHHcCCceEEEec-CccccHHHHHHHHHHHhcCCCceEEEEEeeccccC
Confidence 99999999999999999999999999999999999999999987 788999999999999976 8999999999999532
Q ss_pred C-CCC-CCCCCCChHHHHHHHHHHh-cC-CCccEEEEEccCCCCCh----hhhhhhcccCceEEEEeCCccccCCCCCcc
Q 047961 166 D-DTM-DFIPSGDSWELWNSFRLLC-EH-HSQLSVALDVLSSLPSA----NSLGRWLGEPVRAAIIHTDSFLTNARGYPC 237 (280)
Q Consensus 166 ~-~~~-~~~~~~~~W~~Wn~iR~lc-~y-~~~L~VaL~l~~~lP~~----~~~~RWl~EPV~~lii~ts~F~tN~kGyPV 237 (280)
. +.+ ...+..++|++||+||++| +| +++|+|+|+|+++||+. ++++||+||||+|++|++++|+||+|||||
T Consensus 206 ~~~~~~~~~~~~~~W~~Wn~iR~~C~~y~~~~L~vaL~l~~~lp~~~~~~~~~~RW~~EPv~~l~i~~s~F~tN~~GyPv 285 (745)
T 3ua3_A 206 CKDYDAFTIEHVDLWTIWADFRKNCGNFSGVYFQVALTISSELPDELTELKLVDRWKAEPLAAFVIESGLFISGRNGEAS 285 (745)
T ss_dssp STTCCTTTCSSCCHHHHHHHHHHHTTCCCTTTEEEEEEECSSCCGGGTSHHHHTGGGGTTEEEEEEESCCCCCSTTTCCC
T ss_pred ccccccccccccCHHHHHHHHHHHHhcCCCCcEEEEEEeCCCCCccccchhHHHHHhcCCceEEEecHHHhhcCCCCCcc
Confidence 1 111 1112568999999999999 89 99999999999999999 999999999999999999999999999999
Q ss_pred cCHHHHHHHHHHHhcCce-EEEeccC
Q 047961 238 LSRRHQKLITGFLNHSIQ-VVISGKL 262 (280)
Q Consensus 238 LsK~hQ~~i~~~~r~~~~-iil~g~~ 262 (280)
|||+||+||++|||+++| |||+|..
T Consensus 286 L~k~hQ~li~~~~~~~~~~iil~~~~ 311 (745)
T 3ua3_A 286 IPSAHINLLKHLWTTDALRIVLRATT 311 (745)
T ss_dssp CCHHHHHHHHHSCCSSCCEEEEECCS
T ss_pred CCHHHHHHHHHHHhcCCceEEEECCc
Confidence 999999999999999999 9999977
No 3
>1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} SCOP: c.1.15.1 PDB: 1qum_A* 2nqh_A 2nqj_A* 2nq9_A*
Probab=95.64 E-value=0.21 Score=43.32 Aligned_cols=194 Identities=13% Similarity=0.099 Sum_probs=109.3
Q ss_pred eeecccCCCCChHHHHHhhhccCCCcEEEeccCCCC-CCCc-cccccCCCCCCC-CCCCCCCcccCCCCCcceEEEEecC
Q 047961 16 YCGVETDFNDDMPHLLSFNLSSGGFDFVVASLMDPN-YRPS-LMEKDIGGGSHV-LSFAGSDLVLSPSQWSSHVVGKISS 92 (280)
Q Consensus 16 ~~G~~~~~~~dl~~~l~~a~~~~gydfv~~PIt~~~-~~~~-~~~~d~~~~~~~-~p~~~sD~~L~~~~w~s~vVg~~S~ 92 (280)
.+|.+.....++.+.++.+. +.|||.|=+...+++ |... ...++. ... .-+...++.+ +.+....+-
T Consensus 3 ~~G~~~~~~~~l~~~l~~~~-~~G~~~vEl~~~~~~~~~~~~~~~~~~---~~~~~~l~~~gl~~------~~~~~~~~~ 72 (285)
T 1qtw_A 3 YIGAHVSAAGGLANAAIRAA-EIDATAFALFTKNQRQWRAAPLTTQTI---DEFKAACEKYHYTS------AQILPHDSY 72 (285)
T ss_dssp EEEEECCCTTCHHHHHHHHH-HTTCSEEECCSSCSSCSSCCCCCHHHH---HHHHHHHHHTTCCG------GGBCCBCCT
T ss_pred ceeEEeccccCHHHHHHHHH-HcCCCEEEeeCCCCCcCcCCCCCHHHH---HHHHHHHHHcCCCc------eeEEecCCc
Confidence 48999876678999999999 999999988554443 2111 000000 000 0000001110 001111122
Q ss_pred CCCCCCccHHHHHhHHHHHHHHHHHHhhcCcceeeecCCCCC-------ChhHHHHHHHHHHhhcCcceEEEEEecccCC
Q 047961 93 WIDLDSEDEILRMDSETTLKQEISWASHLSLQACLLPSPKGA-------SCANYARCVNQILQSLNNMQLWLRIPLVKND 165 (280)
Q Consensus 93 WidlDS~d~~ir~~S~~~L~~El~yA~~lgl~aviip~P~~~-------~~~~yAr~i~~~l~~~~~~~iwI~lP~~~~~ 165 (280)
.+++.|+|+..|..+.+.+++.++.|.-+|.+.|++.+.... ...++++.+++++.....+.+.++- ....
T Consensus 73 ~~~l~~~~~~~r~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~a~~~gv~l~lEn--~~~~ 150 (285)
T 1qtw_A 73 LINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINIALDKTQGVTAVIEN--TAGQ 150 (285)
T ss_dssp TCCTTCSSHHHHHHHHHHHHHHHHHHHHTTCCEEEECCCBCTTTSCHHHHHHHHHHHHHHHHHHCSSCEEEEEC--CCCC
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECcCCCCCCCCHHHHHHHHHHHHHHHHhccCCCEEEEec--CCCC
Confidence 467889999999999999999999999999999988542111 1334566666666443344444432 1110
Q ss_pred CCCCCCCCCCChHHHHHHHHHHhcCCCccEEEEEcc------CCCCCh-------hhhhhhcc-cCceEEEEeCC
Q 047961 166 DDTMDFIPSGDSWELWNSFRLLCEHHSQLSVALDVL------SSLPSA-------NSLGRWLG-EPVRAAIIHTD 226 (280)
Q Consensus 166 ~~~~~~~~~~~~W~~Wn~iR~lc~y~~~L~VaL~l~------~~lP~~-------~~~~RWl~-EPV~~lii~ts 226 (280)
... ...+..+....++ .++.++++++.+++. .++... +.+.+.+| +-|+.+-+.-+
T Consensus 151 ~~~----~~~~~~~~~~l~~-~v~~~~~~g~~~D~~H~~~~g~~~~~~~~~~~~~~~~~~~~g~~~i~~vH~~D~ 220 (285)
T 1qtw_A 151 GSN----LGFKFEHLAAIID-GVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDA 220 (285)
T ss_dssp TTB----CCSSHHHHHHHHH-HCSCGGGEEEEEEHHHHHHHTCCCSSHHHHHHHHHHHHHHTCGGGEEEEEECEE
T ss_pred CCc----ccCCHHHHHHHHH-hhcCccceEEEEEhHhHHHcCCCcCChHHHHHHHHHHHHhcCccceeEEEEecC
Confidence 000 0113333333333 344567999999985 243332 22334456 88999998643
No 4
>3aal_A Probable endonuclease 4; endoiv, DNA repair, base excision repair, TIM barrel, DNA DA endonuclease, hydrolase, metal-binding; 1.60A {Geobacillus kaustophilus} PDB: 1xp3_A
Probab=95.63 E-value=0.063 Score=47.81 Aligned_cols=191 Identities=14% Similarity=0.135 Sum_probs=110.9
Q ss_pred eeecccCCC--CChHHHHHhhhccCCCcEEEeccCCCCCCCccccccCCCCCCCCCCCCCCc-----ccCCCCCcceEEE
Q 047961 16 YCGVETDFN--DDMPHLLSFNLSSGGFDFVVASLMDPNYRPSLMEKDIGGGSHVLSFAGSDL-----VLSPSQWSSHVVG 88 (280)
Q Consensus 16 ~~G~~~~~~--~dl~~~l~~a~~~~gydfv~~PIt~~~~~~~~~~~d~~~~~~~~p~~~sD~-----~L~~~~w~s~vVg 88 (280)
.+|.+.... .++.+.++.+. +.|||.|=+...+|+.-... +++..+. .+....- ..+..
T Consensus 7 klG~~~~~~~~~~~~~~l~~~~-~~G~~~vEl~~~~~~~~~~~------------~~~~~~~~~~~~~l~~~gl-~~~~~ 72 (303)
T 3aal_A 7 KIGSHVSMSGKKMLLAASEEAA-SYGANTFMIYTGAPQNTKRK------------SIEELNIEAGRQHMQAHGI-EEIVV 72 (303)
T ss_dssp CEEEECCCCTTTTHHHHHHHHH-HTTCSEEEEESSCTTCCCCC------------CSGGGCHHHHHHHHHHTTC-CEEEE
T ss_pred eeceeeecCCCccHHHHHHHHH-HcCCCEEEEcCCCCCccCCC------------CCCHHHHHHHHHHHHHcCC-ceEEE
Confidence 488888533 36999999999 99999999966665432110 0000010 0000000 12222
Q ss_pred EecCCCCCCCcc-HHHHHhHHHHHHHHHHHHhhcCcceeeecCCC--C----CChhHHHHHHHHHHhhcCcceEEEEEec
Q 047961 89 KISSWIDLDSED-EILRMDSETTLKQEISWASHLSLQACLLPSPK--G----ASCANYARCVNQILQSLNNMQLWLRIPL 161 (280)
Q Consensus 89 ~~S~WidlDS~d-~~ir~~S~~~L~~El~yA~~lgl~aviip~P~--~----~~~~~yAr~i~~~l~~~~~~~iwI~lP~ 161 (280)
..+-.+++.|+| +.+|+.+.+.+++.+..|.-+|.+.|++-+.. . ....++++.++++......+. |-+.-
T Consensus 73 h~~~~~nl~s~d~~~~r~~~~~~~~~~i~~A~~lGa~~vv~h~g~~~~~~~~~~~~~~~~~l~~l~~~a~gv~--l~lEn 150 (303)
T 3aal_A 73 HAPYIINIGNTTNLDTFSLGVDFLRAEIERTEAIGAKQLVLHPGAHVGAGVEAGLRQIIRGLNEVLTREQNVQ--IALET 150 (303)
T ss_dssp ECCTTCCTTCSSCHHHHHHHHHHHHHHHHHHHHHTCSEEEECCEECTTSCHHHHHHHHHHHHHHHCCSSCSCE--EEEEC
T ss_pred eccccccCCCCCcHHHHHHHHHHHHHHHHHHHHcCCCEEEECCCcCCCCCHHHHHHHHHHHHHHHHHhCCCCE--EEEec
Confidence 333347899999 99999999999999999999999999884311 1 123345555566553332333 33322
Q ss_pred ccCCCCCCCCCCCCChHHHHHHHHHHhcCCCccEEEEEccC------CCC--Chhhhhhh---cc-cCceEEEEeCCc
Q 047961 162 VKNDDDTMDFIPSGDSWELWNSFRLLCEHHSQLSVALDVLS------SLP--SANSLGRW---LG-EPVRAAIIHTDS 227 (280)
Q Consensus 162 ~~~~~~~~~~~~~~~~W~~Wn~iR~lc~y~~~L~VaL~l~~------~lP--~~~~~~RW---l~-EPV~~lii~ts~ 227 (280)
...... ....+-+....+-..++..+++++.|++.. ++. ..+.+++| +| +-|+.+-+.-+.
T Consensus 151 ~~~~~~-----~~~~t~~~~~~li~~v~~~~~vg~~lD~~H~~~~g~d~~~~~~~~l~~~~~~~g~~~i~~vHl~D~~ 223 (303)
T 3aal_A 151 MAGKGS-----ECGRTFEELAYIIDGVAYNDKLSVCFDTCHTHDAGYDIVNDFDGVLEEFDRIIGLGRLKVLHINDSK 223 (303)
T ss_dssp CCCCTT-----EECSSHHHHHHHHHHCTTGGGEEEEEEHHHHHHHTCCHHHHHHHHHHHHHHHTCGGGEEEEEECEES
T ss_pred CCCCCC-----ccCCCHHHHHHHHHhcCCCCCEEEEEEccCHhhhCCChhhhHHHHHHHHHHhcCcccEEEEEeeCCC
Confidence 110000 011244444444455666689999999873 211 12344544 45 889999996543
No 5
>2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A*
Probab=94.19 E-value=0.12 Score=45.05 Aligned_cols=192 Identities=12% Similarity=0.156 Sum_probs=110.0
Q ss_pred eecccCCCCChHHHHHhhhccCCCcEEEeccCCCCCCCc--cccccCCCCCCCC-CCCCCCcccCCCCCcceEEEEecCC
Q 047961 17 CGVETDFNDDMPHLLSFNLSSGGFDFVVASLMDPNYRPS--LMEKDIGGGSHVL-SFAGSDLVLSPSQWSSHVVGKISSW 93 (280)
Q Consensus 17 ~G~~~~~~~dl~~~l~~a~~~~gydfv~~PIt~~~~~~~--~~~~d~~~~~~~~-p~~~sD~~L~~~~w~s~vVg~~S~W 93 (280)
+|.+.....++.+.++.+. +.|||.|=+...+|+.-.. ...++. ...- -+. +..|. .+.+.. ..++
T Consensus 4 ~G~~~~~~~~~~~~l~~~~-~~G~~~iEl~~~~~~~~~~~~~~~~~~---~~~~~~l~--~~gl~----~~~~~~-h~~~ 72 (287)
T 2x7v_A 4 IGAHMPISKGFDRVPQDTV-NIGGNSFQIFPHNARSWSAKLPSDEAA---TKFKREMK--KHGID----WENAFC-HSGY 72 (287)
T ss_dssp EEEECCCTTCGGGHHHHHH-HTTCSEEEECSCCCSSSCCCCCCHHHH---HHHHHHHH--HHTCC----GGGEEE-ECCT
T ss_pred eeeeeccccCHHHHHHHHH-HcCCCEEEEeCCCcccccccCCCHHHH---HHHHHHHH--HcCCC----cceeEE-eccc
Confidence 7999876678999999999 9999999886554432110 000000 0000 000 00000 011222 2333
Q ss_pred -CCCCCccHHHHHhHHHHHHHHHHHHhhcCcceeeecCCC--CC----ChhHHHHHHHHHHhhcCcceEEEEEecccCCC
Q 047961 94 -IDLDSEDEILRMDSETTLKQEISWASHLSLQACLLPSPK--GA----SCANYARCVNQILQSLNNMQLWLRIPLVKNDD 166 (280)
Q Consensus 94 -idlDS~d~~ir~~S~~~L~~El~yA~~lgl~aviip~P~--~~----~~~~yAr~i~~~l~~~~~~~iwI~lP~~~~~~ 166 (280)
+++.++|+..|..+.+.+++.++.|.-+|.+.|++.+.. +. ...++++.++++......+++-++- .....
T Consensus 73 ~~~~~~~~~~~r~~~~~~~~~~i~~A~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~l~~l~~~~~gv~l~lEn--~~~~~ 150 (287)
T 2x7v_A 73 LINLASPKDDIWQKSVELLKKEVEICRKLGIRYLNIHPGSHLGTGEEEGIDRIVRGLNEVLNNTEGVVILLEN--VSQKG 150 (287)
T ss_dssp TCCTTCSSHHHHHHHHHHHHHHHHHHHHHTCCEEEECCEECTTSCHHHHHHHHHHHHHHHHTTCCSCEEEEEC--CCCCT
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHcccCCCEEEEeC--CCCCC
Confidence 789999999999999999999999999999999885321 11 2345666777776443334444432 11100
Q ss_pred CCCCCCCCCChHHHHHHHHHHhcCCCccEEEEEccC------CCCCh----hhhhhh---cc-cCceEEEEeCC
Q 047961 167 DTMDFIPSGDSWELWNSFRLLCEHHSQLSVALDVLS------SLPSA----NSLGRW---LG-EPVRAAIIHTD 226 (280)
Q Consensus 167 ~~~~~~~~~~~W~~Wn~iR~lc~y~~~L~VaL~l~~------~lP~~----~~~~RW---l~-EPV~~lii~ts 226 (280)
..- ..+.-+....++ .++..+++++.+++.. ++... +.+++| +| +-|+.+-+.-.
T Consensus 151 ~~~----~~~~~~~~~l~~-~~~~~~~vg~~~D~~h~~~~g~~~~~~~~~~~~l~~~~~~~g~~~i~~vH~~D~ 219 (287)
T 2x7v_A 151 GNI----GYKLEQLKKIRD-LVDQRDRVAITYDTCHGFDSGYDITKKEGVEALLNEIESLFGLERLKMIHLNDS 219 (287)
T ss_dssp TEE----CSSHHHHHHHHH-HCSCGGGEEEEEEHHHHHHTTCCTTSHHHHHHHHHHHHHHTCGGGEEEEEECEE
T ss_pred Ccc----CCCHHHHHHHHH-hcCCCCCeEEEEEhhhHHHcCCCCCchHHHHHHHHHHHHhcCccceeEEEEecC
Confidence 000 113344444443 3443378999999862 32221 344454 66 88999998754
No 6
>3aam_A Endonuclease IV, endoiv; DNA repair, base excision repair, BER, TIM barrel, endonucle hydrolase, structural genomics, NPPSFA; 1.58A {Thermus thermophilus}
Probab=93.11 E-value=0.39 Score=41.59 Aligned_cols=185 Identities=15% Similarity=0.154 Sum_probs=107.5
Q ss_pred eeecccCCCC--ChHHHHHhhhccCCCcEEEeccCCCCC-CCccccccCCCCCCCCCCCCCCc-----ccCCCCCcceEE
Q 047961 16 YCGVETDFND--DMPHLLSFNLSSGGFDFVVASLMDPNY-RPSLMEKDIGGGSHVLSFAGSDL-----VLSPSQWSSHVV 87 (280)
Q Consensus 16 ~~G~~~~~~~--dl~~~l~~a~~~~gydfv~~PIt~~~~-~~~~~~~d~~~~~~~~p~~~sD~-----~L~~~~w~s~vV 87 (280)
.+|.+..... ++.+.++.+. +.|||.|=+-..+|+. ... +++..+. .+....- ..+.
T Consensus 3 klg~~~~~~~~~~~~~~~~~~~-~~G~~~vEl~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~gl-~~~~ 67 (270)
T 3aam_A 3 RYGFHLSIAGKKGVAGAVEEAT-ALGLTAFQIFAKSPRSWRPR-------------ALSPAEVEAFRALREASGG-LPAV 67 (270)
T ss_dssp EEEEBCCCCSTTHHHHHHHHHH-HHTCSCEEEESSCTTCCSCC-------------CCCHHHHHHHHHHHHHTTC-CCEE
T ss_pred eeeeccccCCCccHHHHHHHHH-HcCCCEEEEeCCCCCcCcCC-------------CCCHHHHHHHHHHHHHcCC-ceEE
Confidence 3788875433 5889999998 9999999775544432 111 0000000 0000000 1223
Q ss_pred EEecCCCCCCCccHHHHHhHHHHHHHHHHHHhhcCcceeeecCCCCCChhHHHHHHHHHHhhcC-cceEEEEEecccCCC
Q 047961 88 GKISSWIDLDSEDEILRMDSETTLKQEISWASHLSLQACLLPSPKGASCANYARCVNQILQSLN-NMQLWLRIPLVKNDD 166 (280)
Q Consensus 88 g~~S~WidlDS~d~~ir~~S~~~L~~El~yA~~lgl~aviip~P~~~~~~~yAr~i~~~l~~~~-~~~iwI~lP~~~~~~ 166 (280)
....-++++.| |+.+|+.+.+.+++.++.|.-+|.+.|++.+... +..++++.++++..... ...+.|-+.-.....
T Consensus 68 ~h~~~~~~l~s-~~~~r~~~~~~~~~~i~~a~~lGa~~vv~h~g~~-~~~~~~~~l~~l~~~a~~~~gv~l~lEn~~~~~ 145 (270)
T 3aam_A 68 IHASYLVNLGA-EGELWEKSVASLADDLEKAALLGVEYVVVHPGSG-RPERVKEGALKALRLAGVRSRPVLLVENTAGGG 145 (270)
T ss_dssp EECCTTCCTTC-SSTHHHHHHHHHHHHHHHHHHHTCCEEEECCCBS-CHHHHHHHHHHHHHHHTCCSSSEEEEECCCCCT
T ss_pred EecCcccCCCC-CHHHHHHHHHHHHHHHHHHHHcCCCEEEECCCCC-CHHHHHHHHHHHHHhhcccCCCEEEEecCCCCC
Confidence 33333578889 9999999999999999999999999998864222 22667777777775443 223344443221100
Q ss_pred CCCCCCCCC-ChHHHHHHHHHHhcCCCccEEEEEccC------CCC--Chhhhhhh---cc-cCceEEEEeCCc
Q 047961 167 DTMDFIPSG-DSWELWNSFRLLCEHHSQLSVALDVLS------SLP--SANSLGRW---LG-EPVRAAIIHTDS 227 (280)
Q Consensus 167 ~~~~~~~~~-~~W~~Wn~iR~lc~y~~~L~VaL~l~~------~lP--~~~~~~RW---l~-EPV~~lii~ts~ 227 (280)
. ... +.-+ +..+++-- ++++.|++.. ++. ..+.+++| +| +-|+.+-+.-+.
T Consensus 146 ~-----~~~~~~~~----~~~l~~~v-~vg~~lD~~H~~~~g~d~~~~~~~~l~~~~~~~g~~~i~~vHl~D~~ 209 (270)
T 3aam_A 146 E-----KVGARFEE----LAWLVADT-PLQVCLDTCHAYAAGYDVAEDPLGVLDALDRAVGLERVPVVHLNDSV 209 (270)
T ss_dssp T-----BSCCSHHH----HHHHHTTS-SCEEEEEHHHHHHHTCCTTTCHHHHHHHHHHHTCGGGCCEEECCEES
T ss_pred C-----ccCCCHHH----HHHHHHhC-CEEEEEehhhHHhccCCchhhHHHHHHHHHHhcCccceeEEEEecCC
Confidence 0 011 2222 23344433 8999999872 332 13455555 45 889999987653
No 7
>3ayv_A Putative uncharacterized protein TTHB071; structural genomics, riken structural genomics/proteomics in RSGI, TIM barrel, unknown function; 1.85A {Thermus thermophilus} PDB: 3ayt_A
Probab=90.63 E-value=1.6 Score=37.23 Aligned_cols=163 Identities=13% Similarity=0.076 Sum_probs=92.6
Q ss_pred CChHHHHHhhhccCCCcEEEeccCCCCCCCccccccCCCCCCCCCCCCCCcccCCCCCcceEEEEecCC--CCCCCccHH
Q 047961 25 DDMPHLLSFNLSSGGFDFVVASLMDPNYRPSLMEKDIGGGSHVLSFAGSDLVLSPSQWSSHVVGKISSW--IDLDSEDEI 102 (280)
Q Consensus 25 ~dl~~~l~~a~~~~gydfv~~PIt~~~~~~~~~~~d~~~~~~~~p~~~sD~~L~~~~w~s~vVg~~S~W--idlDS~d~~ 102 (280)
.++.+.++.+. +.||| |=+....+.+.... ...++ ..... . .+...+++ +++.|+|+.
T Consensus 10 ~~l~~~l~~~~-~~G~~-vEl~~~~~~~~~~~--------------~~~~~-~~~~~--~-~~~~h~~~~~~~l~~~~~~ 69 (254)
T 3ayv_A 10 SRAEEALPRLQ-ALGLG-AEVYLDPALLEEDA--------------LFQSL-RRRFS--G-KLSVHLPFWNLDLLSPDPE 69 (254)
T ss_dssp GGHHHHHHHHH-HHTCE-EEEECCGGGTTCHH--------------HHHHH-HHHCC--S-CEEEECCCTTCCTTCSSHH
T ss_pred HHHHHHHHHHH-hcCCC-EEEeccccccCcHH--------------HHHHH-HHHhC--C-CeEEecCccCCCCCCCCHH
Confidence 46788899998 99999 75533222111100 00000 00011 1 23445565 478899999
Q ss_pred HHHhHHHHHHHHHHHHhhcCcceeeecCCCCC---------ChhHHHHHHHHHHhhcC--cceEEEEEecccCCCCCCCC
Q 047961 103 LRMDSETTLKQEISWASHLSLQACLLPSPKGA---------SCANYARCVNQILQSLN--NMQLWLRIPLVKNDDDTMDF 171 (280)
Q Consensus 103 ir~~S~~~L~~El~yA~~lgl~aviip~P~~~---------~~~~yAr~i~~~l~~~~--~~~iwI~lP~~~~~~~~~~~ 171 (280)
.|..+.+.+++-++.|.-+|.+.|++.+.... ...++++.++++..... .+++.++ -...
T Consensus 70 ~r~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lE--n~~~------- 140 (254)
T 3ayv_A 70 VRGLTLRRLLFGLDRAAELGADRAVFHSGIPHGRTPEEALERALPLAEALGLVVRRARTLGVRLLLE--NSHE------- 140 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCSEEEEECCCCTTCCHHHHHHTHHHHHHHTHHHHHHHHHHTCEEEEE--CSSC-------
T ss_pred HHHHHHHHHHHHHHHHHHhCCCEEEECCCCCcccccccHHHHHHHHHHHHHHHHHHHhhcCCEEEEc--CCCC-------
Confidence 99999999999999999999999988643221 13445555666554322 2333333 1111
Q ss_pred CCCCChHHHHHHHHHHhcCCCccEEEEEccC-----CCCChh-hhhhhcccCceEEEEeCC
Q 047961 172 IPSGDSWELWNSFRLLCEHHSQLSVALDVLS-----SLPSAN-SLGRWLGEPVRAAIIHTD 226 (280)
Q Consensus 172 ~~~~~~W~~Wn~iR~lc~y~~~L~VaL~l~~-----~lP~~~-~~~RWl~EPV~~lii~ts 226 (280)
.+..+....++. .+ +++++.+++.. .-|-.+ .++ ++. +.+-+.-.
T Consensus 141 ---~~~~~~~~l~~~-v~--~~vg~~~D~~H~~~~g~~~~~~~~~~--~~~--~~vHl~D~ 191 (254)
T 3ayv_A 141 ---PHPEALRPVLEA-HA--GELGFCFDAAHARVFSRTPDPGPWLA--LAP--EHLHLNDT 191 (254)
T ss_dssp ---SSGGGTHHHHHH-HT--TSSEEEEEHHHHHHHSSCCSSHHHHT--TCC--SEEEECBC
T ss_pred ---CCHHHHHHHHHh-cC--cCEEEEEEchhhHHhCCCchhHHHHH--cCC--CEEEEeCC
Confidence 123333444443 34 78999999862 112233 444 554 77777643
No 8
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=90.32 E-value=3.3 Score=35.94 Aligned_cols=219 Identities=10% Similarity=-0.022 Sum_probs=121.6
Q ss_pred CCceeeecccCCC--CChHHHHHhhhccCCCcEEEeccCCCCCCCcccc-ccCCCCCCCCCCCCCCcccCCCCCcceEEE
Q 047961 12 SESRYCGVETDFN--DDMPHLLSFNLSSGGFDFVVASLMDPNYRPSLME-KDIGGGSHVLSFAGSDLVLSPSQWSSHVVG 88 (280)
Q Consensus 12 ~~~~~~G~~~~~~--~dl~~~l~~a~~~~gydfv~~PIt~~~~~~~~~~-~d~~~~~~~~p~~~sD~~L~~~~w~s~vVg 88 (280)
.+.+.+|+..... -++.+.++.+. +.|||.|=+...+. ...... .. -+...++.+ .+
T Consensus 23 ~m~mklg~~~~~~~~~~~~~~l~~~~-~~G~~~vEl~~~~~--~~~~~~~~~--------~l~~~gl~v---------~~ 82 (287)
T 3kws_A 23 DLELKLSFQEGIAPGESLNEKLDFME-KLGVVGFEPGGGGL--AGRVNEIKQ--------ALNGRNIKV---------SA 82 (287)
T ss_dssp CCCCEEEEETTSSCCSSHHHHHHHHH-HTTCCEEECBSTTC--GGGHHHHHH--------HHTTSSCEE---------CE
T ss_pred cceeeEEEEecccCCCCHHHHHHHHH-HcCCCEEEecCCch--HHHHHHHHH--------HHHHcCCeE---------EE
Confidence 3467788887433 46899999999 99999998877642 111100 00 001111111 11
Q ss_pred Ee-cCCCCCCCccHHHHHhHHHHHHHHHHHHhhcCcceeeecCCCC-------C---ChhHHHHHHHHHHhhc--CcceE
Q 047961 89 KI-SSWIDLDSEDEILRMDSETTLKQEISWASHLSLQACLLPSPKG-------A---SCANYARCVNQILQSL--NNMQL 155 (280)
Q Consensus 89 ~~-S~WidlDS~d~~ir~~S~~~L~~El~yA~~lgl~aviip~P~~-------~---~~~~yAr~i~~~l~~~--~~~~i 155 (280)
.. ..+..+.|+|+..|..+.+.+++-++.|.-+|.+.|++.+... . ...++++.++++.... ..+.+
T Consensus 83 ~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~~lGa~~v~~~~g~~~~~~~~p~~~~~~~~~~~~l~~l~~~a~~~Gv~l 162 (287)
T 3kws_A 83 ICAGFKGFILSTDPAIRKECMDTMKEIIAAAGELGSTGVIIVPAFNGQVPALPHTMETRDFLCEQFNEMGTFAAQHGTSV 162 (287)
T ss_dssp EECCCCSCTTBSSHHHHHHHHHHHHHHHHHHHHTTCSEEEECSCCTTCCSBCCSSHHHHHHHHHHHHHHHHHHHHTTCCE
T ss_pred EecCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEE
Confidence 11 1134567899999999999999999999999999998853211 1 2334556666655322 23444
Q ss_pred EEEEecccCCCCCCCCCCCCChHHHHHHHHHHhcCCCccEEEEEccC----CCCChhhhhhhcccCceEEEEeCCc-ccc
Q 047961 156 WLRIPLVKNDDDTMDFIPSGDSWELWNSFRLLCEHHSQLSVALDVLS----SLPSANSLGRWLGEPVRAAIIHTDS-FLT 230 (280)
Q Consensus 156 wI~lP~~~~~~~~~~~~~~~~~W~~Wn~iR~lc~y~~~L~VaL~l~~----~lP~~~~~~RWl~EPV~~lii~ts~-F~t 230 (280)
-++ -...-+.. ...+..+....++. .+ ++++++.+++.. .-...+.+++ +++-|+.+-+.... ...
T Consensus 163 ~lE--~~~~~~~~----~~~~~~~~~~ll~~-v~-~~~vg~~~D~~h~~~~g~d~~~~l~~-~~~~i~~vHlkD~~~r~~ 233 (287)
T 3kws_A 163 IFE--PLNRKECF----YLRQVADAASLCRD-IN-NPGVRCMGDFWHMTWEETSDMGAFIS-GGEYLQHVHVASRKRRSM 233 (287)
T ss_dssp EEC--CCCTTTCS----SCCCHHHHHHHHHH-HC-CTTEEEEEEHHHHHHHCSCHHHHHHH-HGGGEEEEEECCTTTSCS
T ss_pred EEE--ecCcccCc----ccCCHHHHHHHHHH-cC-CCCeeEEeehHHHHhcCCCHHHHHHH-hhhhEEEEEeCCCCCCCC
Confidence 443 11100000 01234444444443 33 478999999873 2222344555 46889999887762 111
Q ss_pred CCCCCcccCHHHHHHHHHHHhcCc--eEEEecc
Q 047961 231 NARGYPCLSRRHQKLITGFLNHSI--QVVISGK 261 (280)
Q Consensus 231 N~kGyPVLsK~hQ~~i~~~~r~~~--~iil~g~ 261 (280)
--.|.-.+ ....++..+-+.+- .+++.-.
T Consensus 234 pG~G~d~i--d~~~i~~~L~~~gy~g~i~lE~~ 264 (287)
T 3kws_A 234 PGEDGDAD--NYINGFKGLKMIGYNNYVSFECG 264 (287)
T ss_dssp TTTTGGGC--CCHHHHHHHHHTTCCSEEEECCC
T ss_pred CCCCCCCc--CHHHHHHHHHHcCCCccEEEEec
Confidence 11221001 23567777666543 4555543
No 9
>3ktc_A Xylose isomerase; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.54A {Pectobacterium atrosepticum SCRI1043}
Probab=87.67 E-value=1 Score=40.53 Aligned_cols=210 Identities=10% Similarity=-0.033 Sum_probs=114.2
Q ss_pred CChHHHHHhhhccC-CCcEEEeccCCCCCCCcccc-ccCCCCCCCCCCCCCCcccCCCCCcceEEEEec-----CCC--C
Q 047961 25 DDMPHLLSFNLSSG-GFDFVVASLMDPNYRPSLME-KDIGGGSHVLSFAGSDLVLSPSQWSSHVVGKIS-----SWI--D 95 (280)
Q Consensus 25 ~dl~~~l~~a~~~~-gydfv~~PIt~~~~~~~~~~-~d~~~~~~~~p~~~sD~~L~~~~w~s~vVg~~S-----~Wi--d 95 (280)
.++.+.++.+. +. |||.|=+.+.... ..+..+ .. -+....+ .+.+..+ ++. .
T Consensus 33 ~~~~e~l~~aa-~~~G~~~VEl~~~~~~-~~~~~~l~~--------~l~~~Gl---------~i~~~~~~~~~~~~~~g~ 93 (333)
T 3ktc_A 33 LSTIDQINAAK-EVGELSYVDLPYPFTP-GVTLSEVKD--------ALKDAGL---------KAIGITPEIYLQKWSRGA 93 (333)
T ss_dssp CCHHHHHHHHH-HHSSEEEEEEEESCST-TCCHHHHHH--------HHHHHTC---------EEEEEEECTTSGGGTTCS
T ss_pred CCHHHHHHHHH-HhCCCCEEEecCCCcc-hhHHHHHHH--------HHHHcCC---------eEEEEecCcCcccccCCC
Confidence 56789999999 88 9999988654321 111000 00 0000000 1111111 233 4
Q ss_pred CCCccHHHHHhHHHHHHHHHHHHhhcCcceeeecCCC-C----------CChhHHHHHHHHHHhhcCcceEEEEEecccC
Q 047961 96 LDSEDEILRMDSETTLKQEISWASHLSLQACLLPSPK-G----------ASCANYARCVNQILQSLNNMQLWLRIPLVKN 164 (280)
Q Consensus 96 lDS~d~~ir~~S~~~L~~El~yA~~lgl~aviip~P~-~----------~~~~~yAr~i~~~l~~~~~~~iwI~lP~~~~ 164 (280)
+.|+|+.+|+.+.+.+++.+..|.-||.+.|++.+.+ + ....++++.++++........|.|.+--..+
T Consensus 94 l~~~d~~~r~~~i~~~~~~i~~A~~LGa~~vv~~~g~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~~i~lE~~p~~~ 173 (333)
T 3ktc_A 94 FTNPDPAARAAAFELMHESAGIVRELGANYVKVWPGQDGWDYPFQVSHKNLWKLAVDGMRDLAGANPDVKFAIEYKPREP 173 (333)
T ss_dssp TTCSSHHHHHHHHHHHHHHHHHHHHHTCSEEEECCTTCEESSTTSSCHHHHHHHHHHHHHHHHHTCTTSEEEEECCSCSS
T ss_pred CCCcCHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCCCCcCCCCcCCHHHHHHHHHHHHHHHHHHhhcCCEEEEEecCCC
Confidence 7789999999999999999999999999999886542 1 1234567777777765555566655311111
Q ss_pred CCCCCCCCCCCChHHHHHHHHHHhcCCCccEEEEEccCCCCC----hhhhhhh-cccCceEEEEeCCccccCCCCCcc-c
Q 047961 165 DDDTMDFIPSGDSWELWNSFRLLCEHHSQLSVALDVLSSLPS----ANSLGRW-LGEPVRAAIIHTDSFLTNARGYPC-L 238 (280)
Q Consensus 165 ~~~~~~~~~~~~~W~~Wn~iR~lc~y~~~L~VaL~l~~~lP~----~~~~~RW-l~EPV~~lii~ts~F~tN~kGyPV-L 238 (280)
... ....+++.--.+-...+ ++++++.|++..-... .+.+.+- .++=|.++-+.-..- ....+.++ -
T Consensus 174 ~~~-----~~~~~~~~~~~ll~~v~-~~~vgl~lD~~H~~~~g~~~~~~~~~~~~~~~i~~vH~~D~~~-~~d~~~~~G~ 246 (333)
T 3ktc_A 174 RVK-----MTWDSAARTLLGIEDIG-LDNVGVLLDFGHALYGGESPADSAQLIIDRGRLFGMDVNDNLR-GWDDDLVVGT 246 (333)
T ss_dssp SSE-----ESSCSHHHHHHHHHHHT-CTTEEEEEEHHHHHHTTCCHHHHHHHHHHTTCEEEEEBCBCCS-SSCCCBCTTS
T ss_pred Ccc-----ccCCCHHHHHHHHHHcC-CcceEEEEecCcHhhhcCCHHHHHHHHHhCCCEEEEEeCCCCC-CCCCCcCCCC
Confidence 000 01234433222222233 3679999998843222 2333321 256677888776432 11111121 1
Q ss_pred C--HHHHHHHHHHHhcCc--eEEEec
Q 047961 239 S--RRHQKLITGFLNHSI--QVVISG 260 (280)
Q Consensus 239 s--K~hQ~~i~~~~r~~~--~iil~g 260 (280)
. -....+++.+-+.+- .+.+.-
T Consensus 247 G~~~d~~~i~~~L~~~gy~G~i~lE~ 272 (333)
T 3ktc_A 247 VHMTEIFEFFYVLKINNWQGVWQLDQ 272 (333)
T ss_dssp SCHHHHHHHHHHHHHTTCCCCEEECC
T ss_pred CCHHHHHHHHHHHHHcCCCceEEEee
Confidence 1 245677777766543 455543
No 10
>2j6v_A UV endonuclease, UVDE; plasmid, TIM barrel, DNA repair, DNA binding protein, lyase; HET: KCX ALY; 1.55A {Thermus thermophilus} PDB: 3bzg_A 3c0s_A* 3c0l_A 3c0q_A* 3bzj_A
Probab=87.44 E-value=0.8 Score=41.66 Aligned_cols=156 Identities=13% Similarity=0.173 Sum_probs=88.0
Q ss_pred EEEEecCCCCCCCccHHHHHhHHHHHHHHHHHHhhcCcc--eeeecCCC-CC----ChhHHHHHHHHHHhhcCcceEEEE
Q 047961 86 VVGKISSWIDLDSEDEILRMDSETTLKQEISWASHLSLQ--ACLLPSPK-GA----SCANYARCVNQILQSLNNMQLWLR 158 (280)
Q Consensus 86 vVg~~S~WidlDS~d~~ir~~S~~~L~~El~yA~~lgl~--aviip~P~-~~----~~~~yAr~i~~~l~~~~~~~iwI~ 158 (280)
++...+..+++.|+|+.+|+.|.+.|+++++.|..+|++ .+++-+-. .. ...+.+..+++ +... .-.|.
T Consensus 119 i~~H~py~iNL~S~~~e~re~Si~~l~~~l~~a~~lG~~~a~~v~HpG~~~~~~e~~~~r~~e~l~~-~~~a---~~~l~ 194 (301)
T 2j6v_A 119 LSMHPGQYVNPGSPDPEVVERSLAELRYSARLLSLLGAEDGVLVLHLGGAYGEKGKALRRFVENLRG-EEEV---LRYLA 194 (301)
T ss_dssp EEECCCTTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCTTCEEEEECCCCTTCHHHHHHHHHHHHTT-CHHH---HHHEE
T ss_pred EEEeCchhhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCCEEEECCCcCCCCHHHHHHHHHHHHhH-HHhh---cceEE
Confidence 556677789999999999999999999999999999987 55554311 11 12233333333 3211 11233
Q ss_pred EecccCCCCCCCCCCCCChHHHHHHHHHHhcCCCccEEEEEcc------CCCCCh----hhhhhhcccCceEEEEeCCcc
Q 047961 159 IPLVKNDDDTMDFIPSGDSWELWNSFRLLCEHHSQLSVALDVL------SSLPSA----NSLGRWLGEPVRAAIIHTDSF 228 (280)
Q Consensus 159 lP~~~~~~~~~~~~~~~~~W~~Wn~iR~lc~y~~~L~VaL~l~------~~lP~~----~~~~RWl~EPV~~lii~ts~F 228 (280)
|.-.. ..+.. ..+..+|+--. ++|+|+.= .++... .++++|-. ++.+-++.+-+
T Consensus 195 lEn~~------------~~~t~-~el~~l~~~~~-vgvclDtH~~~~g~~~~~~~~~~~~~~~~~~~--~~hiHlsd~~~ 258 (301)
T 2j6v_A 195 LENDE------------RLWNV-EEVLKAAEALG-VPVVVDTLHHALNPGRLPLEEALRLAFPTWRG--RPKVHLASQDP 258 (301)
T ss_dssp EECCS------------SSCCH-HHHHHHHHHHT-CCEEEEHHHHHHSCTTCCHHHHHHHHGGGCSS--CCEEEECCBCT
T ss_pred EEeCC------------CCCCH-HHHHHHHhcCC-CEEEEeHHHHhcCCCCCChHHHHHHHHHHHhh--CCEEEECCCCC
Confidence 32111 11111 45556675544 99999972 134322 24456633 48888877665
Q ss_pred ccCCCCCcccCHH--HHHHHHHHHhcCceEEEeccC
Q 047961 229 LTNARGYPCLSRR--HQKLITGFLNHSIQVVISGKL 262 (280)
Q Consensus 229 ~tN~kGyPVLsK~--hQ~~i~~~~r~~~~iil~g~~ 262 (280)
-+.+++.--+.+. -..+++.+ +.+.-++|....
T Consensus 259 ~~~~drH~~ig~G~~f~~~~~~L-~~~~~~~iEak~ 293 (301)
T 2j6v_A 259 KKRPGAHAFRVTREDWERLLSAL-PGPADVMVEAKG 293 (301)
T ss_dssp TSSTTCBCSSCCHHHHHHHHHHC-SSCEEEEECCTT
T ss_pred CCCCCccccccCCccHHHHHHHH-hhCCcEEEEeCC
Confidence 4333333334432 23333332 236777776643
No 11
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=86.40 E-value=11 Score=31.86 Aligned_cols=179 Identities=9% Similarity=0.078 Sum_probs=99.0
Q ss_pred CChHHHHHhhhccCCCcEEEec-cCCCC-CCCccccccCCCCCCCCCCCCCCcccCCCCCcceEEEEecCCCCCCCccHH
Q 047961 25 DDMPHLLSFNLSSGGFDFVVAS-LMDPN-YRPSLMEKDIGGGSHVLSFAGSDLVLSPSQWSSHVVGKISSWIDLDSEDEI 102 (280)
Q Consensus 25 ~dl~~~l~~a~~~~gydfv~~P-It~~~-~~~~~~~~d~~~~~~~~p~~~sD~~L~~~~w~s~vVg~~S~WidlDS~d~~ 102 (280)
.++.+.++.+. +.|||.|=+. ..... +-.....+.. ..-+....+ .+++.-.+ .++.++|+.
T Consensus 14 ~~~~~~l~~~~-~~G~~~vEl~~~~~~~~~~~~~~~~~~-----~~~l~~~gl---------~~~~~~~~-~~~~~~~~~ 77 (278)
T 1i60_A 14 SNLKLDLELCE-KHGYDYIEIRTMDKLPEYLKDHSLDDL-----AEYFQTHHI---------KPLALNAL-VFFNNRDEK 77 (278)
T ss_dssp CCHHHHHHHHH-HTTCSEEEEETTTHHHHHTTSSCHHHH-----HHHHHTSSC---------EEEEEEEE-ECCSSCCHH
T ss_pred CCHHHHHHHHH-HhCCCEEEEccHHHHHHHhccCCHHHH-----HHHHHHcCC---------Ceeeeccc-cccccCCHH
Confidence 57889999999 9999999887 54321 0000000000 000000011 11111111 267778999
Q ss_pred HHHhHHHHHHHHHHHHhhcCcceeeecCCCCC-------ChhHHHHHHHHHHhhcCcceEEEEEecccCCCCCCCCCCCC
Q 047961 103 LRMDSETTLKQEISWASHLSLQACLLPSPKGA-------SCANYARCVNQILQSLNNMQLWLRIPLVKNDDDTMDFIPSG 175 (280)
Q Consensus 103 ir~~S~~~L~~El~yA~~lgl~aviip~P~~~-------~~~~yAr~i~~~l~~~~~~~iwI~lP~~~~~~~~~~~~~~~ 175 (280)
.|..+.+.+++-++.|.-+|.+.|++.+.... ...++++.++++........+.|-+--....... ..
T Consensus 78 ~~~~~~~~~~~~i~~a~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn~~~~~~~-----~~ 152 (278)
T 1i60_A 78 GHNEIITEFKGMMETCKTLGVKYVVAVPLVTEQKIVKEEIKKSSVDVLTELSDIAEPYGVKIALEFVGHPQCT-----VN 152 (278)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCEEEEECCBCSSCCCHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCTTBS-----SC
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCEEEEEecCCccch-----hc
Confidence 99999999999999999999999988532211 1345666676666433322333333222110000 12
Q ss_pred ChHHHHHHHHHHhcCCCccEEEEEccC----CCCChhhhhhhcccCceEEEEeCCc
Q 047961 176 DSWELWNSFRLLCEHHSQLSVALDVLS----SLPSANSLGRWLGEPVRAAIIHTDS 227 (280)
Q Consensus 176 ~~W~~Wn~iR~lc~y~~~L~VaL~l~~----~lP~~~~~~RWl~EPV~~lii~ts~ 227 (280)
+..+....++.+ + ++++++.+++.. .-...+.+++ +++-|+.+-+.-..
T Consensus 153 ~~~~~~~l~~~~-~-~~~~g~~~D~~h~~~~g~d~~~~~~~-~~~~i~~vHl~D~~ 205 (278)
T 1i60_A 153 TFEQAYEIVNTV-N-RDNVGLVLDSFHFHAMGSNIESLKQA-DGKKIFIYHIDDTE 205 (278)
T ss_dssp SHHHHHHHHHHH-C-CTTEEEEEEHHHHHHTTCCHHHHHTS-CGGGEEEEEECEEC
T ss_pred CHHHHHHHHHHh-C-CCCeeEEEEeEEEeecCCCHHHHHhc-CcceEEEEEecCCC
Confidence 344444444443 3 478999999873 2112233444 36778888887543
No 12
>3m0m_A L-rhamnose isomerase; beta/alpha barrel, HOMO-tetramer, metal-binding protein, TIM isomerase; HET: AOS; 1.45A {Pseudomonas stutzeri} PDB: 3m0l_A* 3m0h_A* 3m0v_A* 3m0x_A* 3m0y_A* 3itx_A 2hcv_A* 2i57_A* 2i56_A 3ity_A 3iud_A 3iuh_A 3iui_A 3itv_A* 3itt_A* 3itl_A* 3ito_A* 4gji_A* 4gjj_A*
Probab=86.18 E-value=3 Score=40.13 Aligned_cols=147 Identities=12% Similarity=0.169 Sum_probs=89.5
Q ss_pred CCCCccHHHHHhHHHHHHHHHHHHhhcCcceeeecCCCC----------CChhHHHHHHHHHHhhc-CcceEEEEEeccc
Q 047961 95 DLDSEDEILRMDSETTLKQEISWASHLSLQACLLPSPKG----------ASCANYARCVNQILQSL-NNMQLWLRIPLVK 163 (280)
Q Consensus 95 dlDS~d~~ir~~S~~~L~~El~yA~~lgl~aviip~P~~----------~~~~~yAr~i~~~l~~~-~~~~iwI~lP~~~ 163 (280)
.+.|+|+.+|+.+.+.+++++.-|..||.+.+.+-+..+ ....++++.|++++... ..+++.|.--...
T Consensus 145 nLtspD~~vR~~Ai~~lk~~Id~A~~LGa~~lv~w~GdG~~~~~~~d~~~a~~rl~esL~ei~~~A~~gv~l~LE~Kp~E 224 (438)
T 3m0m_A 145 SLSHTNAATRAQAVEHNLECIEIGKAIGSKALTVWIGDGSNFPGQSNFTRAFERYLSAMAEIYKGLPDDWKLFSEHKMYE 224 (438)
T ss_dssp STTCSSHHHHHHHHHHHHHHHHHHHHHTCCEEEECCCCEESSTTTSCHHHHHHHHHHHHHHHHHTCCTTCEEEEECCSSS
T ss_pred CCCCcCHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCCccCCCCcCCHHHHHHHHHHHHHHHHHhhhcCCEEEEccCCCc
Confidence 588999999999999999999999999999988754321 12456788888888544 3466666521111
Q ss_pred CCCCCCCCCCCCChHH-HHHHHHHHhcCCCccEEEEEccCCCCChh---hhhh--hcccCceEEEEeCCccccCCCCCcc
Q 047961 164 NDDDTMDFIPSGDSWE-LWNSFRLLCEHHSQLSVALDVLSSLPSAN---SLGR--WLGEPVRAAIIHTDSFLTNARGYPC 237 (280)
Q Consensus 164 ~~~~~~~~~~~~~~W~-~Wn~iR~lc~y~~~L~VaL~l~~~lP~~~---~~~R--Wl~EPV~~lii~ts~F~tN~kGyPV 237 (280)
+ ..+......|. ....++.+ + ++++|.|++..-.+.+. .+.+ ..+ .+..+-++.+-. -..+..+
T Consensus 225 p----~~~~~~~~d~~~~l~li~~v-g--~~vgv~LDtgH~~~ge~i~~~ia~~~~~g-kL~hvHvnD~~r--~D~D~~~ 294 (438)
T 3m0m_A 225 P----AFYSTVVQDWGTNYLIAQTL-G--PKAQCLVDLGHHAPNTNIEMIVARLIQFG-KLGGFHFNDSKY--GDDDLDA 294 (438)
T ss_dssp S----CSSEETTCSHHHHHHHHHHH-C--TTEEEEEETTSSCTTCCHHHHHHHHHHTT-CEEEEEECBCSS--SSCCBCT
T ss_pred C----CcceecchhHHHHHHHHHHh-C--CCEEEEEECCCCCCCCCHHHHHHHHHhcC-CEEEEEcCCCCC--CCCCccC
Confidence 1 00000012333 22333332 3 89999999998776322 2332 233 777888876542 1234444
Q ss_pred cCH---HHHHHHHHHHh
Q 047961 238 LSR---RHQKLITGFLN 251 (280)
Q Consensus 238 LsK---~hQ~~i~~~~r 251 (280)
.+- ....++..+.+
T Consensus 295 g~~~~~e~~~i~~eL~~ 311 (438)
T 3m0m_A 295 GAIEPYRLFLVFNELVD 311 (438)
T ss_dssp TSSCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHH
Confidence 443 45566666655
No 13
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=81.50 E-value=5.8 Score=34.83 Aligned_cols=218 Identities=12% Similarity=0.058 Sum_probs=117.2
Q ss_pred ceeeecccCC------CCChHHHHHhhhccCCCcEEEeccCCCCCCCccccccCCCCCCCCCCCCCCcccCCCCCcceEE
Q 047961 14 SRYCGVETDF------NDDMPHLLSFNLSSGGFDFVVASLMDPNYRPSLMEKDIGGGSHVLSFAGSDLVLSPSQWSSHVV 87 (280)
Q Consensus 14 ~~~~G~~~~~------~~dl~~~l~~a~~~~gydfv~~PIt~~~~~~~~~~~d~~~~~~~~p~~~sD~~L~~~~w~s~vV 87 (280)
+..+|+.... ..++.+ ++.+. +.|||.|=+...++........+.. . .-+....+ .++
T Consensus 20 ~mklg~~~~~~~~~~~~~~l~~-l~~~~-~~G~~~vEl~~~~~~~~~~~~~~~l--~---~~l~~~gl---------~i~ 83 (309)
T 2hk0_A 20 HMKHGIYYSYWEHEWSAKFGPY-IEKVA-KLGFDIIEVAAHHINEYSDAELATI--R---KSAKDNGI---------ILT 83 (309)
T ss_dssp -CEEEEEGGGGCSCTTSCSHHH-HHHHH-HTTCSEEEEEHHHHTTSCHHHHHHH--H---HHHHHTTC---------EEE
T ss_pred CceeEEehhhcccccccccHHH-HHHHH-HhCCCEEEeccCCccccchhhHHHH--H---HHHHHcCC---------eEE
Confidence 4567777632 247788 99998 9999999887654321110000000 0 00000001 111
Q ss_pred EEecC---CCCCCCccHHHHHhHHHHHHHHHHHHhhcCcceeeecCC--CCC----------ChhHHHHHHHHHHhhc--
Q 047961 88 GKISS---WIDLDSEDEILRMDSETTLKQEISWASHLSLQACLLPSP--KGA----------SCANYARCVNQILQSL-- 150 (280)
Q Consensus 88 g~~S~---WidlDS~d~~ir~~S~~~L~~El~yA~~lgl~aviip~P--~~~----------~~~~yAr~i~~~l~~~-- 150 (280)
+ ..+ -+++.++|+..|+.+.+.+++-++.|.-+|.+.|+++.+ .+. ...++++.++++....
T Consensus 84 ~-~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~A~~lG~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~ 162 (309)
T 2hk0_A 84 A-GIGPSKTKNLSSEDAAVRAAGKAFFERTLSNVAKLDIHTIGGALHSYWPIDYSQPVDKAGDYARGVEGINGIADFAND 162 (309)
T ss_dssp E-ECCCCSSSCSSCSCHHHHHHHHHHHHHHHHHHHHTTCCEEEECTTSCSSCCTTSCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred E-ecCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEeeccccccccCCCcCChHHHHHHHHHHHHHHHHHHHH
Confidence 2 111 257888999999999999999999999999999997641 111 1234555666655332
Q ss_pred CcceEEEEEecccCCCCCCCCCCCCChHHHHHHHHHHhcCCCccEEEEEccC----CCCChhhhhhhcccCceEEEEeCC
Q 047961 151 NNMQLWLRIPLVKNDDDTMDFIPSGDSWELWNSFRLLCEHHSQLSVALDVLS----SLPSANSLGRWLGEPVRAAIIHTD 226 (280)
Q Consensus 151 ~~~~iwI~lP~~~~~~~~~~~~~~~~~W~~Wn~iR~lc~y~~~L~VaL~l~~----~lP~~~~~~RWl~EPV~~lii~ts 226 (280)
..+++.++- + ..-+.. ...+..+....++. .+ ++++++.+++.. .-...+.++++ ++-|+.+-+...
T Consensus 163 ~gv~l~lEn-~-~~~~~~----~~~~~~~~~~l~~~-v~-~~~vg~~~D~~H~~~~g~d~~~~l~~~-~~~i~~vHl~D~ 233 (309)
T 2hk0_A 163 LGINLCIEV-L-NRFENH----VLNTAAEGVAFVKD-VG-KNNVKVMLDTFHMNIEEDSFGDAIRTA-GPLLGHFHTGES 233 (309)
T ss_dssp TTCEEEEEC-C-CTTTCS----SCCSHHHHHHHHHH-HT-CTTEEEEEEHHHHHHHCSCHHHHHHHH-GGGEEEEEECCT
T ss_pred cCCEEEEee-c-cccccc----ccCCHHHHHHHHHH-cC-CCCeEEEEehhhHhhcCcCHHHHHHHH-HhhEEEEEeCCC
Confidence 234444442 1 100000 01234444444443 34 478999999873 11123445554 788999988765
Q ss_pred ccccCCCCCcccCHHHHHHHHHHHhcC--ceEEEecc
Q 047961 227 SFLTNARGYPCLSRRHQKLITGFLNHS--IQVVISGK 261 (280)
Q Consensus 227 ~F~tN~kGyPVLsK~hQ~~i~~~~r~~--~~iil~g~ 261 (280)
--..=-.| .+ ....++..+-+.+ -.+++.-.
T Consensus 234 ~r~~~G~G--~i--d~~~~~~~L~~~gy~g~i~lE~~ 266 (309)
T 2hk0_A 234 NRRVPGKG--RM--PWHEIGLALRDINYTGAVIMEPF 266 (309)
T ss_dssp TSCCTTSS--CC--CHHHHHHHHHHTTCCSEEEECCC
T ss_pred CCCCCcCC--cc--CHHHHHHHHHHcCCCCcEEEEec
Confidence 21100112 22 2556666666544 35666543
No 14
>1a0c_A Xylose isomerase; ketolisomerase, xylose metabolism, glucose-fructose interconversion, hydride transfer; 2.50A {Thermoanaerobacteriumthermosulfurigenes} SCOP: c.1.15.3 PDB: 1a0d_A 1a0e_A
Probab=80.19 E-value=6.4 Score=37.66 Aligned_cols=126 Identities=11% Similarity=0.010 Sum_probs=77.7
Q ss_pred CCCccHHHHHhHHHHHHHHHHHHhhcCcceeee-cCCC------C----CChhHHHHHHHHHHhhcCc----ceEEEEEe
Q 047961 96 LDSEDEILRMDSETTLKQEISWASHLSLQACLL-PSPK------G----ASCANYARCVNQILQSLNN----MQLWLRIP 160 (280)
Q Consensus 96 lDS~d~~ir~~S~~~L~~El~yA~~lgl~avii-p~P~------~----~~~~~yAr~i~~~l~~~~~----~~iwI~lP 160 (280)
+-|+|+.+|..+.+.+++.|.+|.-||.+.+.+ ++.. + ....++++.|+++..-... +++.|.-
T Consensus 154 ~~spd~evR~~ai~~lk~aId~A~~LGa~~vv~~~G~~G~~~~~~~~~~~~~~~~~e~L~~~~~~A~~~Gv~v~l~IEp- 232 (438)
T 1a0c_A 154 STSCNADVFAYSAAQVKKALEITKELGGENYVFWGGREGYETLLNTDMEFELDNFARFLHMAVDYAKEIGFEGQFLIEP- 232 (438)
T ss_dssp TTCSCHHHHHHHHHHHHHHHHHHHHTTCSEEEECCTTSEESCGGGCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECC-
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccCCCccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEee-
Confidence 468999999999999999999999999999877 3321 0 1224566677766643221 3444431
Q ss_pred cccCCCCCCCCCCCCChHHHHHHHHHHhcCCCccEEEEEccCC----CCChhhhhhhc-ccCceEEEEeCC
Q 047961 161 LVKNDDDTMDFIPSGDSWELWNSFRLLCEHHSQLSVALDVLSS----LPSANSLGRWL-GEPVRAAIIHTD 226 (280)
Q Consensus 161 ~~~~~~~~~~~~~~~~~W~~Wn~iR~lc~y~~~L~VaL~l~~~----lP~~~~~~RWl-~EPV~~lii~ts 226 (280)
+.. +... .....+++.-..|....+...+++|.|++... ....+.+++=. ..=|+++-+..+
T Consensus 233 ~p~--~~~~--~~~~~t~~~al~li~~vg~pn~vgv~lDt~H~~~~g~di~~~i~~~~~~~~L~hvHlnD~ 299 (438)
T 1a0c_A 233 KPK--EPTK--HQYDFDVANVLAFLRKYDLDKYFKVNIEANHATLAFHDFQHELRYARINGVLGSIDANTG 299 (438)
T ss_dssp CSC--SSSS--EESSCSHHHHHHHHHHTTCTTTEEEEEEHHHHHHTTCCHHHHHHHHHHTTCEEEEECCBC
T ss_pred CCC--CCCC--CcccCCHHHHHHHHHHcCCCCeEEEEEEhhhhhhcCCCHHHHHHHhcCCCcEEEEECCCC
Confidence 210 0000 00235777666666666765569999998842 11233455433 245888888754
No 15
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=78.45 E-value=30 Score=29.40 Aligned_cols=220 Identities=10% Similarity=-0.023 Sum_probs=118.4
Q ss_pred CCceeeecccC-CCCChHHHHHhhhccCCCcEEEeccCCCCCCCcccc-ccCCCCCCCCCCCCCCcccCCCCCcceEEEE
Q 047961 12 SESRYCGVETD-FNDDMPHLLSFNLSSGGFDFVVASLMDPNYRPSLME-KDIGGGSHVLSFAGSDLVLSPSQWSSHVVGK 89 (280)
Q Consensus 12 ~~~~~~G~~~~-~~~dl~~~l~~a~~~~gydfv~~PIt~~~~~~~~~~-~d~~~~~~~~p~~~sD~~L~~~~w~s~vVg~ 89 (280)
.|+|+.-.... .--++.+.++.+. +.|||.|=+....+ ....+ .. -+....+ .+++.
T Consensus 9 ~~~~~~~~~~~f~~~~~~~~l~~~~-~~G~~~vEl~~~~~---~~~~~~~~--------~l~~~gl---------~~~~~ 67 (269)
T 3ngf_A 9 MPRFAANLSTMFNEVPFLERFRLAA-EAGFGGVEFLFPYD---FDADVIAR--------ELKQHNL---------TQVLF 67 (269)
T ss_dssp CCEEEEETTTSCTTSCHHHHHHHHH-HTTCSEEECSCCTT---SCHHHHHH--------HHHHTTC---------EEEEE
T ss_pred CcceeeechhhhccCCHHHHHHHHH-HcCCCEEEecCCcc---CCHHHHHH--------HHHHcCC---------cEEEE
Confidence 45666666664 3368899999999 99999998764211 11000 00 0000000 01111
Q ss_pred e---cCCCCC---CCccHHHHHhHHHHHHHHHHHHhhcCcceeeecC--CCCC----ChhHHHHHHHHHHhhcC--cceE
Q 047961 90 I---SSWIDL---DSEDEILRMDSETTLKQEISWASHLSLQACLLPS--PKGA----SCANYARCVNQILQSLN--NMQL 155 (280)
Q Consensus 90 ~---S~Widl---DS~d~~ir~~S~~~L~~El~yA~~lgl~aviip~--P~~~----~~~~yAr~i~~~l~~~~--~~~i 155 (280)
. ..|... -++||..|..+.+.+++-++.|.-+|.+.|++.+ |... ...++++.++++..... .+++
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l 147 (269)
T 3ngf_A 68 NMPPGDWAAGERGMAAISGREQEFRDNVDIALHYALALDCRTLHAMSGITEGLDRKACEETFIENFRYAADKLAPHGITV 147 (269)
T ss_dssp ECCCSCTTTTCCBCTTCTTCHHHHHHHHHHHHHHHHHTTCCEEECCBCBCTTSCHHHHHHHHHHHHHHHHHHHGGGTCEE
T ss_pred ecCCCccccCCCCcCCCccHHHHHHHHHHHHHHHHHHcCCCEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEE
Confidence 1 122211 1568888999999999999999999999998843 2111 23456666777664333 3444
Q ss_pred EEEEecccCCCCCCCCCCCCChHHHHHHHHHHhcCCCccEEEEEccC----CCCChhhhhhhcccCceEEEEeCCc-ccc
Q 047961 156 WLRIPLVKNDDDTMDFIPSGDSWELWNSFRLLCEHHSQLSVALDVLS----SLPSANSLGRWLGEPVRAAIIHTDS-FLT 230 (280)
Q Consensus 156 wI~lP~~~~~~~~~~~~~~~~~W~~Wn~iR~lc~y~~~L~VaL~l~~----~lP~~~~~~RWl~EPV~~lii~ts~-F~t 230 (280)
.++- + ...+.... ...+..+.+..++.+ + ++++++.|++.. .-...+.++ -+++-|+.+-+.-.- ...
T Consensus 148 ~lE~-~-n~~~~~~~--~~~~~~~~~~l~~~v-~-~~~vg~~~D~~h~~~~g~d~~~~l~-~~~~~i~~vHl~D~~~r~~ 220 (269)
T 3ngf_A 148 LVEP-L-NTRNMPGY--FIVHQLEAVGLVKRV-N-RPNVAVQLDLYHAQIMDGDLTRLIE-KMNGAFSHVQIASVPDRHE 220 (269)
T ss_dssp EECC-C-CTTTSTTB--SCCCHHHHHHHHHHH-C-CTTEEEEEEHHHHHHHTCCHHHHHH-HTTTSEEEEEECCTTTCCC
T ss_pred EEee-C-CcccCccc--hhcCHHHHHHHHHHh-C-CCCCCeEEEhhhHHhhCCCHHHHHH-HhhhhEEEEEEecCCCCCC
Confidence 4431 1 10000000 023455555555543 3 578999999873 111223343 456788888887641 000
Q ss_pred CCCCCcccCHHHHHHHHHHHhcC--ceEEEeccCC
Q 047961 231 NARGYPCLSRRHQKLITGFLNHS--IQVVISGKLN 263 (280)
Q Consensus 231 N~kGyPVLsK~hQ~~i~~~~r~~--~~iil~g~~~ 263 (280)
--.| .+ ....++..+-+.+ -.+++.-.+.
T Consensus 221 ~G~G--~i--d~~~~~~~L~~~gy~g~i~lE~~p~ 251 (269)
T 3ngf_A 221 PDEG--EL--NYPYLFSVLESVGYRGWVGCEYNPR 251 (269)
T ss_dssp TTSS--SB--CHHHHHHHHHHTTCCSEEEECCCCS
T ss_pred CCCC--cc--CHHHHHHHHHHcCCCceEEEEecCC
Confidence 0122 22 2456677666543 4566665443
No 16
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=77.85 E-value=4 Score=35.52 Aligned_cols=221 Identities=13% Similarity=0.122 Sum_probs=118.3
Q ss_pred CCCceeeecccCCC---CChHHHHHhhhccCCCcEEEeccCCCCCC--C-ccccccCCCCCCCC-CCCCCCcccCCCCCc
Q 047961 11 KSESRYCGVETDFN---DDMPHLLSFNLSSGGFDFVVASLMDPNYR--P-SLMEKDIGGGSHVL-SFAGSDLVLSPSQWS 83 (280)
Q Consensus 11 ~~~~~~~G~~~~~~---~dl~~~l~~a~~~~gydfv~~PIt~~~~~--~-~~~~~d~~~~~~~~-p~~~sD~~L~~~~w~ 83 (280)
......+|+..... .++.+.++.+. +.|||.|=+....+... + ....++. ...- -+...++
T Consensus 13 ~~~~~~~gi~~~~~~~~~~~~~~l~~~~-~~G~~~iEl~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~gl-------- 80 (295)
T 3cqj_A 13 LSKQIPLGIYEKALPAGECWLERLQLAK-TLGFDFVEMSVDETDERLSRLDWSREQR---LALVNAIVETGV-------- 80 (295)
T ss_dssp ---CCCEEEEGGGSCCCSCHHHHHHHHH-HTTCSEEEEECCSSHHHHGGGGCCHHHH---HHHHHHHHHHCC--------
T ss_pred ccccccceeeeecCCCCCCHHHHHHHHH-hcCCCEEEEecCCcccccCcccCCHHHH---HHHHHHHHHcCC--------
Confidence 34456678777422 58999999999 99999998876543100 0 0000000 0000 0000001
Q ss_pred ceEEEEe-cC-C-CCCCCccHHHHHhHHHHHHHHHHHHhhcCcceeeecCCCC-------CChhHHHHHHHHHHhhcC--
Q 047961 84 SHVVGKI-SS-W-IDLDSEDEILRMDSETTLKQEISWASHLSLQACLLPSPKG-------ASCANYARCVNQILQSLN-- 151 (280)
Q Consensus 84 s~vVg~~-S~-W-idlDS~d~~ir~~S~~~L~~El~yA~~lgl~aviip~P~~-------~~~~~yAr~i~~~l~~~~-- 151 (280)
.+++.. +. + +++.++|+..|+.+.+.+++-++.|.-+|.+.|++++... ....++++.++++.....
T Consensus 81 -~i~~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~A~~lG~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~ 159 (295)
T 3cqj_A 81 -RVPSMCLSAHRRFPLGSEDDAVRAQGLEIMRKAIQFAQDVGIRVIQLAGYDVYYQEANNETRRRFRDGLKESVEMASRA 159 (295)
T ss_dssp -EEEEEEEGGGGTSCTTCSSHHHHHHHHHHHHHHHHHHHHHTCCEEEECCCSCSSSCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred -eEEEEecCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCCCCCcCcCHHHHHHHHHHHHHHHHHHHHHh
Confidence 111111 11 1 4678899999999999999999999999999999874211 123445666666553322
Q ss_pred cceEEEEEecccCCCCCCCCCCCCChHHHHHHHHHHhcCCCccEEEEEccC----CCCChhhhhhhcccCceEEEEeCCc
Q 047961 152 NMQLWLRIPLVKNDDDTMDFIPSGDSWELWNSFRLLCEHHSQLSVALDVLS----SLPSANSLGRWLGEPVRAAIIHTDS 227 (280)
Q Consensus 152 ~~~iwI~lP~~~~~~~~~~~~~~~~~W~~Wn~iR~lc~y~~~L~VaL~l~~----~lP~~~~~~RWl~EPV~~lii~ts~ 227 (280)
.+++.++- ... .. ..+.-+....++.+ + ++++++.+++.. .-...+.+++ +++-|+.+-+.-..
T Consensus 160 Gv~l~lEn--~~~--~~-----~~~~~~~~~l~~~v-~-~~~vg~~~D~~h~~~~g~d~~~~l~~-~~~~i~~vHl~D~~ 227 (295)
T 3cqj_A 160 QVTLAMEI--MDY--PL-----MNSISKALGYAHYL-N-NPWFQLYPDIGNLSAWDNDVQMELQA-GIGHIVAVHVKDTK 227 (295)
T ss_dssp TCEEEEEC--CSS--GG-----GCSHHHHHHHHHHH-C-CTTEEEECBHHHHHSSSCCHHHHHHH-TGGGBCCEEECEEE
T ss_pred CCEEEEee--CCC--cc-----cCCHHHHHHHHHhc-C-CCCeEEEeccchHhhcCCCHHHHHHH-hccceEEEEeecCC
Confidence 23444332 110 00 11333444444433 2 478999999852 2222356666 47888888886541
Q ss_pred -----cccCCCCCcccCHHHHHHHHHHHhcC--ceEEEec
Q 047961 228 -----FLTNARGYPCLSRRHQKLITGFLNHS--IQVVISG 260 (280)
Q Consensus 228 -----F~tN~kGyPVLsK~hQ~~i~~~~r~~--~~iil~g 260 (280)
+..=-.| .+ ....+++.+-+.+ -.+++.-
T Consensus 228 ~g~~~~~p~G~G--~i--d~~~~~~~L~~~gy~g~i~lE~ 263 (295)
T 3cqj_A 228 PGVFKNVPFGEG--VV--DFERCFETLKQSGYCGPYLIEM 263 (295)
T ss_dssp TTEEEEECTTSS--SC--CHHHHHHHHHHTTCCSCEEECC
T ss_pred CCccCCcCCCCC--cc--CHHHHHHHHHHCCCceeEEEEe
Confidence 2221123 22 2456666665533 3566653
No 17
>3qxb_A Putative xylose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.90A {Rhodospirillum rubrum}
Probab=77.34 E-value=2.8 Score=37.13 Aligned_cols=193 Identities=10% Similarity=0.012 Sum_probs=105.0
Q ss_pred eeeecccC-----CCCChHHHHHhhhccCCCcEEEeccCCCC--CCCccccccCCCCCCC-CCCCCCCcccCCCCCcceE
Q 047961 15 RYCGVETD-----FNDDMPHLLSFNLSSGGFDFVVASLMDPN--YRPSLMEKDIGGGSHV-LSFAGSDLVLSPSQWSSHV 86 (280)
Q Consensus 15 ~~~G~~~~-----~~~dl~~~l~~a~~~~gydfv~~PIt~~~--~~~~~~~~d~~~~~~~-~p~~~sD~~L~~~~w~s~v 86 (280)
..+|+... ...+...+++.+. +.|||.|=+....+. |......++. ..+ ..+....+ .+
T Consensus 20 ~~lgi~~~~~~~~~~~~~~~~~~~a~-~~G~~~vEl~~~~~~~~~~~~~~~~~~---~~~~~~l~~~Gl---------~i 86 (316)
T 3qxb_A 20 MKLGVNLCFAVKRWLEPDRLAGLVRD-DLGLEYVQYTYDLTDPWWPDIERDRRA---IAYAKAFRKAGL---------TI 86 (316)
T ss_dssp CCEEEEGGGGTTTSCSHHHHHHHHHH-TSCCCEEEEETTTSCTTSCHHHHHHHH---HHHHHHHHHTTC---------EE
T ss_pred ccceecchHHHhccCCHHHHHHHHHH-HcCCCEEEeeccccCccccccchhhHH---HHHHHHHHHcCC---------eE
Confidence 44666662 2234566777877 999999988876543 1111000000 000 00000011 11
Q ss_pred EEEec-----CCCCCCCccHHHHHhHHHHHHHHHHHHhhcCcceeeecCCC-------C-----CChhHHHHHHHHHHhh
Q 047961 87 VGKIS-----SWIDLDSEDEILRMDSETTLKQEISWASHLSLQACLLPSPK-------G-----ASCANYARCVNQILQS 149 (280)
Q Consensus 87 Vg~~S-----~WidlDS~d~~ir~~S~~~L~~El~yA~~lgl~aviip~P~-------~-----~~~~~yAr~i~~~l~~ 149 (280)
.+... .+.++.|+|+.+|+.+.+.+++.++.|.-||.+.|+++.-. . ....++++.++++...
T Consensus 87 ~~~~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 166 (316)
T 3qxb_A 87 ESTFGGLASYTYNHFLAPTLELQSLGYQHLKRAIDMTAAMEVPATGMPFGSYSAADALNPARREEIYAIARDMWIELAAY 166 (316)
T ss_dssp EEEECCHHHHTSCBTTCSSHHHHHHHHHHHHHHHHHHHHTTCCEEEECCBBCCHHHHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeeccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEecCCCcCccccCCcccHHHHHHHHHHHHHHHHHH
Confidence 22111 25689999999999999999999999999999999876411 0 0123455556665532
Q ss_pred c--Ccce-EEEEEecccCCCCCCCCCCCCChHHHHHHHHHHhc-CCCccEEEEEccCCCC--------ChhhhhhhcccC
Q 047961 150 L--NNMQ-LWLRIPLVKNDDDTMDFIPSGDSWELWNSFRLLCE-HHSQLSVALDVLSSLP--------SANSLGRWLGEP 217 (280)
Q Consensus 150 ~--~~~~-iwI~lP~~~~~~~~~~~~~~~~~W~~Wn~iR~lc~-y~~~L~VaL~l~~~lP--------~~~~~~RWl~EP 217 (280)
. ..++ +.++- |..+. .. ..+.-+....++.+-. .++++++.|++..-.- +....-+=+++=
T Consensus 167 a~~~Gv~~l~lE~-~~~~~-~~-----~~t~~~~~~l~~~v~~~~~~~vg~~lD~~H~~~~~~~~~~~d~~~~l~~~~~~ 239 (316)
T 3qxb_A 167 AKRQGLSMLYVEP-VPLAT-EF-----PSSAADAARLMADLDGRTEIPVRLLVDWGHALFEPLFGPEADMDHWMDLCQPW 239 (316)
T ss_dssp HHHHTCCEEEECC-CSCTT-BS-----SCSHHHHHHHHHHHTTTSSSCEEEEEEHHHHTCHHHHGGGCSHHHHHHHHGGG
T ss_pred HHhcCCeEEEEEe-cCCcc-cc-----CCCHHHHHHHHHHHhccCCCCEEEEEEccchheecccccccCHHHHHHHHHhh
Confidence 2 2344 44431 11010 00 1234455555555432 2689999999874322 111122224677
Q ss_pred ceEEEEeCCc
Q 047961 218 VRAAIIHTDS 227 (280)
Q Consensus 218 V~~lii~ts~ 227 (280)
|+.+-+.-..
T Consensus 240 i~~vHlkD~~ 249 (316)
T 3qxb_A 240 IAAYHIQQTD 249 (316)
T ss_dssp EEEEEECBCC
T ss_pred heEEeeecCC
Confidence 8898887654
No 18
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=76.66 E-value=8.3 Score=33.06 Aligned_cols=212 Identities=13% Similarity=0.103 Sum_probs=115.2
Q ss_pred CChHHHHHhhhccCCCcEEEeccCCCCCCCccccccCCCCCCCCCCCCCCcccCCCCCcceEEEEecCCCCCCCccHHHH
Q 047961 25 DDMPHLLSFNLSSGGFDFVVASLMDPNYRPSLMEKDIGGGSHVLSFAGSDLVLSPSQWSSHVVGKISSWIDLDSEDEILR 104 (280)
Q Consensus 25 ~dl~~~l~~a~~~~gydfv~~PIt~~~~~~~~~~~d~~~~~~~~p~~~sD~~L~~~~w~s~vVg~~S~WidlDS~d~~ir 104 (280)
.++.+.++.+. +.|||.|=+...++........+.. ..-+...++.+ +.+.+ ....+++.++|+..|
T Consensus 17 ~~~~~~l~~~~-~~G~~~vEl~~~~~~~~~~~~~~~~-----~~~l~~~gl~~------~~~~~-~~~~~~l~~~d~~~r 83 (290)
T 2qul_A 17 VDFPATAKRIA-GLGFDLMEISLGEFHNLSDAKKREL-----KAVADDLGLTV------MCCIG-LKSEYDFASPDKSVR 83 (290)
T ss_dssp CCHHHHHHHHH-HTTCSEEEEESTTGGGSCHHHHHHH-----HHHHHHHTCEE------EEEEE-ECGGGCTTCSCHHHH
T ss_pred ccHHHHHHHHH-HhCCCEEEEecCCccccchhhHHHH-----HHHHHHcCCce------EEecC-CCCCCCCCCCCHHHH
Confidence 57889999999 9999999887765422110000000 00000001111 11111 122468889999999
Q ss_pred HhHHHHHHHHHHHHhhcCcceeeecC----CC-----C-C---ChhHHHHHHHHHHhhcC--cceEEEEEecccCCCCCC
Q 047961 105 MDSETTLKQEISWASHLSLQACLLPS----PK-----G-A---SCANYARCVNQILQSLN--NMQLWLRIPLVKNDDDTM 169 (280)
Q Consensus 105 ~~S~~~L~~El~yA~~lgl~aviip~----P~-----~-~---~~~~yAr~i~~~l~~~~--~~~iwI~lP~~~~~~~~~ 169 (280)
+.+.+.+++-+..|.-+|.+.|+++. .. . . ...++++.++++..... .+.+.++- +. .-+..
T Consensus 84 ~~~~~~~~~~i~~a~~lG~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn-~~-~~~~~- 160 (290)
T 2qul_A 84 DAGTEYVKRLLDDCHLLGAPVFAGLTFCAWPQSPPLDMKDKRPYVDRAIESVRRVIKVAEDYGIIYALEV-VN-RFEQW- 160 (290)
T ss_dssp HHHHHHHHHHHHHHHHHTCSEEEEEEEEESSCCCCTTCCCCHHHHHHHHHHHHTTHHHHHHHTCEEEEEC-CC-TTTCS-
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEeeccccCCcccCCCcccHHHHHHHHHHHHHHHHHHHHHcCCEEEEEe-Cc-ccccc-
Confidence 99999999999999999999998742 11 1 1 23344555555443222 34444441 11 00000
Q ss_pred CCCCCCChHHHHHHHHHHhcCCCccEEEEEccC----CCCChhhhhhhcccCceEEEEeCCccccCCCCCcccCHHHHHH
Q 047961 170 DFIPSGDSWELWNSFRLLCEHHSQLSVALDVLS----SLPSANSLGRWLGEPVRAAIIHTDSFLTNARGYPCLSRRHQKL 245 (280)
Q Consensus 170 ~~~~~~~~W~~Wn~iR~lc~y~~~L~VaL~l~~----~lP~~~~~~RWl~EPV~~lii~ts~F~tN~kGyPVLsK~hQ~~ 245 (280)
...+.-+....++. .+ ++++++.+++.. .-...+.+++. ++-|+.+-+.-.--..=-.|. + ....+
T Consensus 161 ---~~~~~~~~~~l~~~-~~-~~~~g~~~D~~h~~~~g~d~~~~l~~~-~~~i~~vH~~D~~~~~~G~G~--i--d~~~~ 230 (290)
T 2qul_A 161 ---LCNDAKEAIAFADA-VD-SPACKVQLDTFHMNIEETSFRDAILAC-KGKMGHFHLGEANRLPPGEGR--L--PWDEI 230 (290)
T ss_dssp ---SCCSHHHHHHHHHH-HC-CTTEEEEEEHHHHHHHCSCHHHHHHHT-TTTEEEEEECCTTSCCTTSSC--S--CHHHH
T ss_pred ---ccCCHHHHHHHHHH-cC-CCCEEEEEEchhhhhcCCCHHHHHHHH-HhheeEEEEccCCCCCCCCCC--c--CHHHH
Confidence 02244555555543 33 578999999963 22223445554 788999998765221111232 2 35666
Q ss_pred HHHHHhcC--ceEEEeccC
Q 047961 246 ITGFLNHS--IQVVISGKL 262 (280)
Q Consensus 246 i~~~~r~~--~~iil~g~~ 262 (280)
++.+-+.+ -.+++.-..
T Consensus 231 ~~~L~~~gy~g~~~lE~~~ 249 (290)
T 2qul_A 231 FGALKEIGYDGTIVMEPFM 249 (290)
T ss_dssp HHHHHHTTCCSCEEECCCC
T ss_pred HHHHHHhCCCceEEEEecC
Confidence 66665544 456665433
No 19
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=75.92 E-value=9.9 Score=32.77 Aligned_cols=187 Identities=14% Similarity=0.108 Sum_probs=109.9
Q ss_pred CCceeeecccCCCCChHHHHHhhhccCCCcEEEeccCCCCCCCccccccCCCCCCCCCCCCCCcccCCCCCcceEEEEec
Q 047961 12 SESRYCGVETDFNDDMPHLLSFNLSSGGFDFVVASLMDPNYRPSLMEKDIGGGSHVLSFAGSDLVLSPSQWSSHVVGKIS 91 (280)
Q Consensus 12 ~~~~~~G~~~~~~~dl~~~l~~a~~~~gydfv~~PIt~~~~~~~~~~~d~~~~~~~~p~~~sD~~L~~~~w~s~vVg~~S 91 (280)
.+.+.+|.......++.+.++.+. +.|||.|=+....+..-.....+.. ..-+....+ .+.+...
T Consensus 8 ~~~~~lg~~t~~~~~l~~~l~~~~-~~G~~~vEl~~~~~~~~~~~~~~~~-----~~~l~~~gl---------~~~~~~~ 72 (290)
T 3tva_A 8 KPYWPIGVFTSVDAGLGVHLEVAQ-DLKVPTVQVHAPHPHTRTREHAQAF-----RAKCDAAGI---------QVTVIFG 72 (290)
T ss_dssp -CCSCEEEEEESSSSSSBCHHHHH-HTTCSEEEEECCCGGGCSHHHHHHH-----HHHHHHTTC---------EEEEEEC
T ss_pred ccceeEEEEecCCCCHHHHHHHHH-HcCCCEEEecCCCCCcCCHHHHHHH-----HHHHHHcCC---------EEEEEee
Confidence 445678888765677888999998 9999999888754421110000000 000000000 1122211
Q ss_pred -----CCCC-------CCCccHHHHHhHHHHHHHHHHHHhhcCcceeeecC---CCC--CChhHHHHHHHHHHhhc--Cc
Q 047961 92 -----SWID-------LDSEDEILRMDSETTLKQEISWASHLSLQACLLPS---PKG--ASCANYARCVNQILQSL--NN 152 (280)
Q Consensus 92 -----~Wid-------lDS~d~~ir~~S~~~L~~El~yA~~lgl~aviip~---P~~--~~~~~yAr~i~~~l~~~--~~ 152 (280)
++.+ +.+.|+..|+.+.+.+++-+..|.-+|.+.|++.+ |.. ....++++.++++.... ..
T Consensus 73 ~~~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~i~~a~~lG~~~v~~~~G~~~~~~~~~~~~~~~~l~~l~~~a~~~G 152 (290)
T 3tva_A 73 GFDGESYADIPTTARTVGLVPLETRASRVAEMKEISDFASWVGCPAIGLHIGFVPESSSPDYSELVRVTQDLLTHAANHG 152 (290)
T ss_dssp CCTTCCCSSHHHHHHHSSSCSTTTHHHHHHHHHHHHHHHHHHTCSEEEECCCCCCCTTSHHHHHHHHHHHHHHHHHHTTT
T ss_pred ccCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCcccchHHHHHHHHHHHHHHHHHHHcC
Confidence 1333 46678889999999999999999999999999853 211 13445666677766432 33
Q ss_pred ceEEEEEecccCCCCCCCCCCCCChHHHHHHHHHHhcCCCccEEEEEccCC-----CCChhhhhhhcccCceEEEEeCCc
Q 047961 153 MQLWLRIPLVKNDDDTMDFIPSGDSWELWNSFRLLCEHHSQLSVALDVLSS-----LPSANSLGRWLGEPVRAAIIHTDS 227 (280)
Q Consensus 153 ~~iwI~lP~~~~~~~~~~~~~~~~~W~~Wn~iR~lc~y~~~L~VaL~l~~~-----lP~~~~~~RWl~EPV~~lii~ts~ 227 (280)
+++.++-- ..+..+....++. .+ ++++++.+++..- ....+.+++ +++-|+.+-+.-..
T Consensus 153 v~l~lE~~-------------~~~~~~~~~l~~~-~~-~~~~g~~~D~~h~~~~g~~d~~~~l~~-~~~~i~~vHl~D~~ 216 (290)
T 3tva_A 153 QAVHLETG-------------QESADHLLEFIED-VN-RPNLGINFDPANMILYGTGNPIEALRK-VARYVRSIHCKDAL 216 (290)
T ss_dssp CEEEEECC-------------SSCHHHHHHHHHH-HC-CTTEEEEECHHHHHHTTCSCHHHHHHH-HGGGEEEEEECEEE
T ss_pred CEEEEecC-------------CCCHHHHHHHHHh-cC-CCCEEEEeccHHHHHhCCCCHHHHHHH-HHhhheEEEecccc
Confidence 45544321 1135555555543 34 6899999998732 222334444 56788888887764
Q ss_pred cc
Q 047961 228 FL 229 (280)
Q Consensus 228 F~ 229 (280)
..
T Consensus 217 ~~ 218 (290)
T 3tva_A 217 WA 218 (290)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 20
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=70.71 E-value=20 Score=30.73 Aligned_cols=203 Identities=12% Similarity=0.096 Sum_probs=112.3
Q ss_pred CChHHHHHhhhccCCCcEEEeccCCC-CCCCccccccCCCCCCCCCCCCCCcccCCCCCcceEEEEec--CCCCCCCccH
Q 047961 25 DDMPHLLSFNLSSGGFDFVVASLMDP-NYRPSLMEKDIGGGSHVLSFAGSDLVLSPSQWSSHVVGKIS--SWIDLDSEDE 101 (280)
Q Consensus 25 ~dl~~~l~~a~~~~gydfv~~PIt~~-~~~~~~~~~d~~~~~~~~p~~~sD~~L~~~~w~s~vVg~~S--~WidlDS~d~ 101 (280)
.++.+.++.+. +.|||.|=+...+. .+..... +.. ..-+...++. +.+..+ ..+++.++|+
T Consensus 17 ~~~~~~l~~~~-~~G~~~vEl~~~~~~~~~~~~~-~~~-----~~~l~~~gl~---------i~~~~~~~~~~~l~~~d~ 80 (294)
T 3vni_A 17 ADYKYYIEKVA-KLGFDILEIAASPLPFYSDIQI-NEL-----KACAHGNGIT---------LTVGHGPSAEQNLSSPDP 80 (294)
T ss_dssp CCHHHHHHHHH-HHTCSEEEEESTTGGGCCHHHH-HHH-----HHHHHHTTCE---------EEEEECCCGGGCTTCSCH
T ss_pred cCHHHHHHHHH-HcCCCEEEecCcccCCcCHHHH-HHH-----HHHHHHcCCe---------EEEeecCCCCcCCCCCCH
Confidence 47899999999 99999998876531 1100000 000 0000000111 111111 2367889999
Q ss_pred HHHHhHHHHHHHHHHHHhhcCcceeeec--CCC------CC----ChhHHHHHHHHHHhhc--CcceEEEEEecccCCCC
Q 047961 102 ILRMDSETTLKQEISWASHLSLQACLLP--SPK------GA----SCANYARCVNQILQSL--NNMQLWLRIPLVKNDDD 167 (280)
Q Consensus 102 ~ir~~S~~~L~~El~yA~~lgl~aviip--~P~------~~----~~~~yAr~i~~~l~~~--~~~~iwI~lP~~~~~~~ 167 (280)
..|+.+.+.+++-+..|.-+|.+.|.+. ++. .. ...++++.++++.... ..+++.++- + ...+.
T Consensus 81 ~~r~~~~~~~~~~i~~a~~lG~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lEn-~-~~~~~ 158 (294)
T 3vni_A 81 DIRKNAKAFYTDLLKRLYKLDVHLIGGALYSYWPIDYTKTIDKKGDWERSVESVREVAKVAEACGVDFCLEV-L-NRFEN 158 (294)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCEEEESTTSCSSCCTTSCCCHHHHHHHHHHHHHHHHHHHHHTTCEEEEEC-C-CTTTC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCeeeccccCCCCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEe-c-CcccC
Confidence 9999999999999999999999999642 111 11 2345566666665432 234544442 1 10000
Q ss_pred CCCCCCCCChHHHHHHHHHHhcCCCccEEEEEccC----CCCChhhhhhhcccCceEEEEeCCccccCCCCCc---ccCH
Q 047961 168 TMDFIPSGDSWELWNSFRLLCEHHSQLSVALDVLS----SLPSANSLGRWLGEPVRAAIIHTDSFLTNARGYP---CLSR 240 (280)
Q Consensus 168 ~~~~~~~~~~W~~Wn~iR~lc~y~~~L~VaL~l~~----~lP~~~~~~RWl~EPV~~lii~ts~F~tN~kGyP---VLsK 240 (280)
. ...+.-+....++. .+ ++++++.+++.. .-...+.+++. ++=|..+-+.-.- ++.| .+
T Consensus 159 ~----~~~~~~~~~~l~~~-v~-~~~vg~~~D~~h~~~~g~d~~~~l~~~-~~~i~~vHl~D~~-----r~~pG~G~i-- 224 (294)
T 3vni_A 159 Y----LINTAQEGVDFVKQ-VD-HNNVKVMLDTFHMNIEEDSIGGAIRTA-GSYLGHLHTGECN-----RKVPGRGRI-- 224 (294)
T ss_dssp S----SCCSHHHHHHHHHH-HC-CTTEEEEEEHHHHHHHCSCHHHHHHHH-GGGEEEEEECCTT-----SCCTTSSSC--
T ss_pred c----ccCCHHHHHHHHHH-cC-CCCEEEEEEhhhhHHcCCCHHHHHHHh-hhhEeEEEeCCCC-----CCCCCCCCc--
Confidence 0 01234444444443 33 478999999873 22223455554 7788888887641 2222 12
Q ss_pred HHHHHHHHHHhcC--ceEEEe
Q 047961 241 RHQKLITGFLNHS--IQVVIS 259 (280)
Q Consensus 241 ~hQ~~i~~~~r~~--~~iil~ 259 (280)
....++..+-+.+ -.+++.
T Consensus 225 d~~~~~~~L~~~gy~g~~~lE 245 (294)
T 3vni_A 225 PWVEIGEALADIGYNGSVVME 245 (294)
T ss_dssp CHHHHHHHHHHTTCCSCEEEC
T ss_pred CHHHHHHHHHHhCCCCcEEEE
Confidence 2466676666544 346664
No 21
>2zvr_A Uncharacterized protein TM_0416; hyperthermophIle, ketohexose 3-epimeras tagatose 3-epimerase, isomerase; 2.20A {Thermotoga maritima}
Probab=69.37 E-value=26 Score=30.12 Aligned_cols=203 Identities=12% Similarity=0.116 Sum_probs=110.5
Q ss_pred ChHHHHHhhhccCCCcEEEeccCCCCCCCcccc-ccCCCCCCCCCCCCCCcccCCCCCcceEEEEec--C----CCCCCC
Q 047961 26 DMPHLLSFNLSSGGFDFVVASLMDPNYRPSLME-KDIGGGSHVLSFAGSDLVLSPSQWSSHVVGKIS--S----WIDLDS 98 (280)
Q Consensus 26 dl~~~l~~a~~~~gydfv~~PIt~~~~~~~~~~-~d~~~~~~~~p~~~sD~~L~~~~w~s~vVg~~S--~----WidlDS 98 (280)
++.+.++.+. +.|||.|=+....+.- ..... .+ -+...++ .+++.-. + -+++.+
T Consensus 42 ~~~~~l~~~~-~~G~~~vEl~~~~~~~-~~~~~~~~--------~l~~~gl---------~~~~~~~~~p~~~~~~~l~~ 102 (290)
T 2zvr_A 42 DLRKGMELAK-RVGYQAVEIAVRDPSI-VDWNEVKI--------LSEELNL---------PICAIGTGQAYLADGLSLTH 102 (290)
T ss_dssp HHHHHHHHHH-HHTCSEEEEECSCGGG-SCHHHHHH--------HHHHHTC---------CEEEEECTHHHHTTCCCTTC
T ss_pred CHHHHHHHHH-HhCCCEEEEcCCCcch-hhHHHHHH--------HHHHcCC---------eEEEEeccCccccCCCCCCC
Confidence 5678889888 9999999887664321 11000 00 0000000 1112211 1 357888
Q ss_pred ccHHHHHhHHHHHHHHHHHHhhcCcceeeec--CCC-C----CChhHHHHHHHHHHhhcCcceEEEEEecccCCCCCCCC
Q 047961 99 EDEILRMDSETTLKQEISWASHLSLQACLLP--SPK-G----ASCANYARCVNQILQSLNNMQLWLRIPLVKNDDDTMDF 171 (280)
Q Consensus 99 ~d~~ir~~S~~~L~~El~yA~~lgl~aviip--~P~-~----~~~~~yAr~i~~~l~~~~~~~iwI~lP~~~~~~~~~~~ 171 (280)
+|+.+|+.+.+.+++-++.|.-+|.+.|+.+ +.. . ....++++.++++...... +.+-+--...- ...
T Consensus 103 ~d~~~r~~~~~~~~~~i~~A~~lG~~~v~~~~~g~~~~~~~~~~~~~~~~~l~~l~~~a~~--v~l~lEn~~~~-~~~-- 177 (290)
T 2zvr_A 103 PNDEIRKKAIERVVKHTEVAGMFGALVIIGLVRGRREGRSYEETEELFIESMKRLLELTEH--AKFVIEPLNRY-ETD-- 177 (290)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHTCEEEESGGGCCCTTSCHHHHHHHHHHHHHHHHHHCSS--CCEEECCCCTT-TCS--
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCEEEecCCCCCCCcCHHHHHHHHHHHHHHHHHHhcc--CEEEEEeCCCc-Ccc--
Confidence 9999999999999999999999999998855 211 1 1234566667776654433 22323111000 000
Q ss_pred CCCCChHHHHHHHHHHhcCCCccEEEEEccC----CCCChhhhhhhcccCceEEEEeCCccccCCCCCcccCHHHHHHHH
Q 047961 172 IPSGDSWELWNSFRLLCEHHSQLSVALDVLS----SLPSANSLGRWLGEPVRAAIIHTDSFLTNARGYPCLSRRHQKLIT 247 (280)
Q Consensus 172 ~~~~~~W~~Wn~iR~lc~y~~~L~VaL~l~~----~lP~~~~~~RWl~EPV~~lii~ts~F~tN~kGyPVLsK~hQ~~i~ 247 (280)
...+.-+....++. .+ ++++++.+++.. .-...+.+++ +++-|+.+-+...--..=-.| .+ ....+++
T Consensus 178 -~~~~~~~~~~l~~~-~~-~~~vgl~~D~~h~~~~g~d~~~~l~~-~~~~i~~vHl~D~~r~~~G~G--~i--d~~~~~~ 249 (290)
T 2zvr_A 178 -FINTIDDALRILRK-IN-SNRVGILADTFHMNIEEVNIPESLKR-AGEKLYHFHVADSNRWAPGCG--HF--DFRSVFN 249 (290)
T ss_dssp -SCCSHHHHHHHHHH-HC-CTTEEEEEEHHHHHHHCSSHHHHHHH-HGGGEEEEEECCTTSSSTTSS--CC--CHHHHHH
T ss_pred -ccCCHHHHHHHHHH-cC-CCCEEEEEehhHhhhcCCCHHHHHHH-hhccEEEEEEcCCCCCCCCCc--cc--CHHHHHH
Confidence 01234444444443 33 478999999873 2112344555 478899998876311110112 12 2456666
Q ss_pred HHHhcC--ceEEEec
Q 047961 248 GFLNHS--IQVVISG 260 (280)
Q Consensus 248 ~~~r~~--~~iil~g 260 (280)
.+-+.+ -.+++.-
T Consensus 250 ~L~~~gy~g~i~lE~ 264 (290)
T 2zvr_A 250 TLKEIGYNRYVSVEC 264 (290)
T ss_dssp HHHHTTCCSEEEECC
T ss_pred HHHHcCCCceEEEEe
Confidence 666544 3556554
No 22
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=67.01 E-value=62 Score=27.93 Aligned_cols=184 Identities=7% Similarity=0.032 Sum_probs=100.1
Q ss_pred CceeeecccC---CCCChHHHHHhhhccCCCcEEEeccCCC-CC---CCccccccCCCCCCCCCCCCCCcccCCCCCcce
Q 047961 13 ESRYCGVETD---FNDDMPHLLSFNLSSGGFDFVVASLMDP-NY---RPSLMEKDIGGGSHVLSFAGSDLVLSPSQWSSH 85 (280)
Q Consensus 13 ~~~~~G~~~~---~~~dl~~~l~~a~~~~gydfv~~PIt~~-~~---~~~~~~~d~~~~~~~~p~~~sD~~L~~~~w~s~ 85 (280)
+...+|+..- ...++.+.++.+. +.|||.|=+...+. .+ .....+ . ..-+...++ .
T Consensus 21 ~~~klgi~~~~~~~~~~~~~~l~~a~-~~G~~~vEl~~~~~~~~~~~~~~~~~--~-----~~~l~~~gl---------~ 83 (296)
T 2g0w_A 21 KKCPITISSYTLGTEVSFPKRVKVAA-ENGFDGIGLRAENYVDALAAGLTDED--M-----LRILDEHNM---------K 83 (296)
T ss_dssp -CCCEEECGGGGTTTSCHHHHHHHHH-HTTCSEEEEEHHHHHHHHHTTCCHHH--H-----HHHHHHTTC---------E
T ss_pred CCCCceeechhcCCCCCHHHHHHHHH-HcCCCEEEeCHHHHHHHHhcCCcHHH--H-----HHHHHHcCC---------c
Confidence 4456777763 2257899999999 99999998865321 00 000000 0 000000011 1
Q ss_pred EEEEecCCCCCCCccHHHHHhHHHHHHHHHHHHhhcCcceeeecCCCCCChhHHHHHHHHHHhhcCcceEEEEEecccCC
Q 047961 86 VVGKISSWIDLDSEDEILRMDSETTLKQEISWASHLSLQACLLPSPKGASCANYARCVNQILQSLNNMQLWLRIPLVKND 165 (280)
Q Consensus 86 vVg~~S~WidlDS~d~~ir~~S~~~L~~El~yA~~lgl~aviip~P~~~~~~~yAr~i~~~l~~~~~~~iwI~lP~~~~~ 165 (280)
+++ +.+..++.++++..|. +.+.+++.++.|.-+|.+.|.+..........+++.++++......+++-++-- ..
T Consensus 84 i~~-~~~~~~~~~~~~~~~~-~~~~~~~~i~~A~~lGa~~v~~g~~~~~~~~~~~~~l~~l~~~a~Gv~l~lE~~--~~- 158 (296)
T 2g0w_A 84 VTE-VEYITQWGTAEDRTAE-QQKKEQTTFHMARLFGVKHINCGLLEKIPEEQIIVALGELCDRAEELIIGLEFM--PY- 158 (296)
T ss_dssp EEE-EECBCCCSSTTTCCHH-HHHHHHHHHHHHHHHTCCEEEECCCSCCCHHHHHHHHHHHHHHHTTSEEEEECC--TT-
T ss_pred eEe-ehhhhccccCChHHHH-HHHHHHHHHHHHHHcCCCEEEEcCCCCCCHHHHHHHHHHHHHHhcCCEEEEEec--CC-
Confidence 111 1123445455665565 578899999999999999998843212235667777777664443344444421 10
Q ss_pred CCCCCCCCCCChHHHHHHHHHHhcCCCccEEEEEccCCCC---ChhhhhhhcccCceEEEEeCC
Q 047961 166 DDTMDFIPSGDSWELWNSFRLLCEHHSQLSVALDVLSSLP---SANSLGRWLGEPVRAAIIHTD 226 (280)
Q Consensus 166 ~~~~~~~~~~~~W~~Wn~iR~lc~y~~~L~VaL~l~~~lP---~~~~~~RWl~EPV~~lii~ts 226 (280)
. ...+.-+.+..++.+ + ++++++.+++..-.- +....-+=+++-|+.+-+.-.
T Consensus 159 -~-----~~~~~~~~~~l~~~v-~-~~~vgl~~D~~H~~~~g~d~~~~~~~~~~~i~~vHl~D~ 214 (296)
T 2g0w_A 159 -S-----GVADLQAAWRVAEAC-G-RDNAQLICDTWHWARANQTAESIKNVPADRIVSIQLCDV 214 (296)
T ss_dssp -S-----SSCSHHHHHHHHHHH-T-CTTEEEEEEHHHHHHTTCCGGGGTTCCGGGEEEEEECBC
T ss_pred -C-----CCCCHHHHHHHHHHh-C-CCCeEEEEehhHhhccCCCHHHHHhcChhhEEEEEecCC
Confidence 0 022455556555543 3 478999999863111 111222334677888888654
No 23
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=66.55 E-value=33 Score=30.01 Aligned_cols=117 Identities=13% Similarity=0.192 Sum_probs=69.8
Q ss_pred cHHHHHhHHHHHHHHHHHHhhcCcceeeecCCCC-----------------CChhHHHHHHHHHHhhcC--cceEEEEEe
Q 047961 100 DEILRMDSETTLKQEISWASHLSLQACLLPSPKG-----------------ASCANYARCVNQILQSLN--NMQLWLRIP 160 (280)
Q Consensus 100 d~~ir~~S~~~L~~El~yA~~lgl~aviip~P~~-----------------~~~~~yAr~i~~~l~~~~--~~~iwI~lP 160 (280)
++.+|+.+.+.+++-++.|.-+|.+.|++.+-.. ....++++.++++..... .+++.++-
T Consensus 102 ~~~~r~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lEn- 180 (340)
T 2zds_A 102 AEGVRQRAAAEIKDTARAAARLGVDTVIGFTGSAIWHLVAMFPPAPESMIERGYQDFADRWNPILDVFDAEGVRFAHEV- 180 (340)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCSEEEECCCCSSGGGTTCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCCcCcccccccCCCcccchHHHHHHHHHHHHHHHHHHHHcCCEEEEEc-
Confidence 3678999999999999999999999998864111 012344555555553322 34444432
Q ss_pred cccCCCCCCCCCCCCChHHHHHHHHHHhcCCCccEEEEEccC----CCCChhhhhhhcccCceEEEEeCCc
Q 047961 161 LVKNDDDTMDFIPSGDSWELWNSFRLLCEHHSQLSVALDVLS----SLPSANSLGRWLGEPVRAAIIHTDS 227 (280)
Q Consensus 161 ~~~~~~~~~~~~~~~~~W~~Wn~iR~lc~y~~~L~VaL~l~~----~lP~~~~~~RWl~EPV~~lii~ts~ 227 (280)
... .. ..+..+....++ ..+.++++++.+++.. .-...+.++++ ++-|+.+-+.-..
T Consensus 181 -~~~--~~-----~~~~~~~~~ll~-~v~~~~~vg~~~D~~H~~~~g~d~~~~l~~~-~~~i~~vHl~D~~ 241 (340)
T 2zds_A 181 -HPS--EI-----AYDYWTTHRALE-AVGHRPAFGLNFDPSHFVWQDLDPVGFLWDF-RDRIYHVDCKEAR 241 (340)
T ss_dssp -CTT--SS-----CCSHHHHHHHHH-HTTTCTTEEEEECCHHHHHTTCCHHHHHHHT-GGGEEEEEECEEE
T ss_pred -CCC--cc-----cCCHHHHHHHHH-hcCCCCCeeEEEchhhHHHhCCCHHHHHHHH-HhhEEEEEeccCc
Confidence 111 00 123444444444 3343578999999873 22223445554 6778888886654
No 24
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=61.90 E-value=50 Score=27.51 Aligned_cols=156 Identities=7% Similarity=-0.048 Sum_probs=85.2
Q ss_pred CccHHHHHhHHHHHHHHHHHHhhcCcceeeecCCCC---C----ChhHHHHHHHHHHhhcCcceEEEEEecccCCCCCCC
Q 047961 98 SEDEILRMDSETTLKQEISWASHLSLQACLLPSPKG---A----SCANYARCVNQILQSLNNMQLWLRIPLVKNDDDTMD 170 (280)
Q Consensus 98 S~d~~ir~~S~~~L~~El~yA~~lgl~aviip~P~~---~----~~~~yAr~i~~~l~~~~~~~iwI~lP~~~~~~~~~~ 170 (280)
++|+..|+.+.+.+++-++.|.-+|.+.|.+.+... . ...++++.++++........+.+-+--..+.+....
T Consensus 74 ~~~~~~~~~~~~~~~~~i~~a~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~~E~~~~~~~~~~ 153 (260)
T 1k77_A 74 SALPGREHEAHADIDLALEYALALNCEQVHVMAGVVPAGEDAERYRAVFIDNIRYAADRFAPHGKRILVEALSPGVKPHY 153 (260)
T ss_dssp TTCTTCHHHHHHHHHHHHHHHHHTTCSEEECCCCBCCTTSCHHHHHHHHHHHHHHHHHHHGGGTCEEEECCCCTTTSTTB
T ss_pred CCChhHHHHHHHHHHHHHHHHHHcCCCEEEECcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEeCCccCCCcC
Confidence 568889999999999999999999999998843221 1 123456666666543332233343321111000000
Q ss_pred CCCCCChHHHHHHHHHHhcCCCccEEEEEccCCC----CChhhhhhhcccCceEEEEeCCc-cccCCCCCcccCHHHHHH
Q 047961 171 FIPSGDSWELWNSFRLLCEHHSQLSVALDVLSSL----PSANSLGRWLGEPVRAAIIHTDS-FLTNARGYPCLSRRHQKL 245 (280)
Q Consensus 171 ~~~~~~~W~~Wn~iR~lc~y~~~L~VaL~l~~~l----P~~~~~~RWl~EPV~~lii~ts~-F~tN~kGyPVLsK~hQ~~ 245 (280)
...+.-+.+..++. .+ ++++++.+++..-. ...+.+++ +++-|+.+-+.-.- ...--.| .+ ....+
T Consensus 154 --~~~~~~~~~~l~~~-~~-~~~~g~~~D~~h~~~~~~d~~~~l~~-~~~~i~~vH~~D~~~r~~~G~G--~i--d~~~~ 224 (260)
T 1k77_A 154 --LFSSQYQALAIVEE-VA-RDNVFIQLDTFHAQKVDGNLTHLIRD-YAGKYAHVQIAGLPDRHEPDDG--EI--NYPWL 224 (260)
T ss_dssp --SCCSHHHHHHHHHH-HC-CTTEEEEEEHHHHHHHTCCHHHHHHH-TTTSEEEEEECCTTTCCCSSSS--SS--CHHHH
T ss_pred --ccCCHHHHHHHHHH-hC-CCCEEEEeeHHHHHhhCCCHHHHHHH-hhhheeEEEECCCCCCCCCCCC--cc--CHHHH
Confidence 01234444444443 23 47899999987321 12233444 47889988886431 0000012 12 25667
Q ss_pred HHHHHhcC--ceEEEeccC
Q 047961 246 ITGFLNHS--IQVVISGKL 262 (280)
Q Consensus 246 i~~~~r~~--~~iil~g~~ 262 (280)
+..+-+.+ -.+++.-.+
T Consensus 225 ~~~L~~~gy~g~i~~E~~~ 243 (260)
T 1k77_A 225 FRLFDEVGYQGWIGCEYKP 243 (260)
T ss_dssp HHHHHHTTCCSCEEECCCC
T ss_pred HHHHHHcCCCceEEEEeec
Confidence 77666543 446665433
No 25
>1bxb_A Xylose isomerase; xylose metabolism; 2.20A {Thermus thermophilus} SCOP: c.1.15.3 PDB: 1bxc_A
Probab=60.69 E-value=17 Score=33.45 Aligned_cols=125 Identities=7% Similarity=-0.003 Sum_probs=73.6
Q ss_pred CCCCccHHHHHhHHHHHHHHHHHHhhcCcceeeecCCCC-----------CChhHHHHHHHHHHhhcC----cceEEEEE
Q 047961 95 DLDSEDEILRMDSETTLKQEISWASHLSLQACLLPSPKG-----------ASCANYARCVNQILQSLN----NMQLWLRI 159 (280)
Q Consensus 95 dlDS~d~~ir~~S~~~L~~El~yA~~lgl~aviip~P~~-----------~~~~~yAr~i~~~l~~~~----~~~iwI~l 159 (280)
++.|+|+.+|..+.+.+++-++.|.-||.+.|++-+++. ....++++.++++..... .+++.|+-
T Consensus 102 ~l~~~d~~~r~~~i~~~~~~i~~A~~LGa~~vv~~~G~~g~~~~~~~~~~~~~~~~~e~L~~l~~~a~~~g~gv~l~lE~ 181 (387)
T 1bxb_A 102 AFTSPDPWVRAYALRKSLETMDLGAELGAEIYVVWPGREGAEVEATGKARKVWDWVREALNFMAAYAEDQGYGYRFALEP 181 (387)
T ss_dssp STTCSSHHHHHHHHHHHHHHHHHHHHHTCCEEEECCTTCEESCGGGCGGGTHHHHHHHHHHHHHHHHHHHTCCCEEEECC
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCCCCccCCccCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec
Confidence 578899999999999999999999999999998865321 123567777777664322 34444432
Q ss_pred ecccCCCCCCCCCCCCChHHH-HHHHHHHhcCCCc-cEEEEEccCC----CCChhhhhhhc-ccCceEEEEeCC
Q 047961 160 PLVKNDDDTMDFIPSGDSWEL-WNSFRLLCEHHSQ-LSVALDVLSS----LPSANSLGRWL-GEPVRAAIIHTD 226 (280)
Q Consensus 160 P~~~~~~~~~~~~~~~~~W~~-Wn~iR~lc~y~~~-L~VaL~l~~~----lP~~~~~~RWl-~EPV~~lii~ts 226 (280)
... +... .....+++. +..++ ..+ +++ ++|.+++..- ....+.+++.. ..-|.++-+...
T Consensus 182 --~~~-~~~~--~~~~~t~~~~~~ll~-~v~-~~~~vgl~lD~gH~~~~g~d~~~~l~~~~~~~~i~~vHl~D~ 248 (387)
T 1bxb_A 182 --KPN-EPRG--DIYFATVGSMLAFIH-TLD-RPERFGLNPEFAHETMAGLNFVHAVAQALDAGKLFHIDLNDQ 248 (387)
T ss_dssp --CSS-SSSS--EESSCSHHHHHHHHT-TSS-SGGGEEECCBHHHHHHTTCCHHHHHHHHHHTTCBCCEECCBC
T ss_pred --CCC-CCCC--CccCCCHHHHHHHHH-HcC-CccceEEEEecCcccccCCCHHHHHHHhccCCcEEEEEeCCC
Confidence 110 0000 001123322 32222 222 345 9999988632 22233455543 267888888754
No 26
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=57.32 E-value=76 Score=26.84 Aligned_cols=117 Identities=15% Similarity=0.080 Sum_probs=69.6
Q ss_pred ccHHHHHhHHHHHHHHHHHHhhcCcceeeecCCC-CC------ChhHHHHHHHHHHhh--cCcceEEEEEecccCCCCCC
Q 047961 99 EDEILRMDSETTLKQEISWASHLSLQACLLPSPK-GA------SCANYARCVNQILQS--LNNMQLWLRIPLVKNDDDTM 169 (280)
Q Consensus 99 ~d~~ir~~S~~~L~~El~yA~~lgl~aviip~P~-~~------~~~~yAr~i~~~l~~--~~~~~iwI~lP~~~~~~~~~ 169 (280)
+++..+..+.+.+++-++.|.-+|.+.|.+.+.. .. ...++++.++++... ...+++.++- .. . ..
T Consensus 74 ~~~~~~~~~~~~~~~~i~~A~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~-~~-~--~~- 148 (286)
T 3dx5_A 74 SLSADFEKTIEKCEQLAILANWFKTNKIRTFAGQKGSADFSQQERQEYVNRIRMICELFAQHNMYVLLET-HP-N--TL- 148 (286)
T ss_dssp STTSCHHHHHHHHHHHHHHHHHHTCCEEEECSCSSCGGGSCHHHHHHHHHHHHHHHHHHHHTTCEEEEEC-CT-T--ST-
T ss_pred CCchhHHHHHHHHHHHHHHHHHhCCCEEEEcCCCCCcccCcHHHHHHHHHHHHHHHHHHHHhCCEEEEec-CC-C--cC-
Confidence 3445578889999999999999999999774321 11 234456666666542 2345555552 11 1 00
Q ss_pred CCCCCCChHHHHHHHHHHhcCCCccEEEEEccC----CCCChhhhhhhcccCceEEEEeCCc
Q 047961 170 DFIPSGDSWELWNSFRLLCEHHSQLSVALDVLS----SLPSANSLGRWLGEPVRAAIIHTDS 227 (280)
Q Consensus 170 ~~~~~~~~W~~Wn~iR~lc~y~~~L~VaL~l~~----~lP~~~~~~RWl~EPV~~lii~ts~ 227 (280)
..+..+....++. .+ ++++++.+++.. .-...+.+++ +++=|+.+-+.-..
T Consensus 149 ----~~~~~~~~~l~~~-~~-~~~vg~~~D~~h~~~~g~d~~~~l~~-~~~~i~~vHl~D~~ 203 (286)
T 3dx5_A 149 ----TDTLPSTLELLGE-VD-HPNLKINLDFLHIWESGADPVDSFQQ-LRPWIQHYHFKNIS 203 (286)
T ss_dssp ----TSSHHHHHHHHHH-HC-CTTEEEEEEHHHHHHTTCCHHHHHHH-HGGGEEEEEECEES
T ss_pred ----cCCHHHHHHHHHh-cC-CCCeEEEeccccHhhcCCCHHHHHHH-HHhHheEEEecCCc
Confidence 1245555444443 34 589999999873 2112233444 45778888877654
No 27
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=56.96 E-value=32 Score=29.41 Aligned_cols=115 Identities=4% Similarity=-0.068 Sum_probs=66.6
Q ss_pred cHHHHHhHHHHHHHHHHHHhhcCcceeeecCC-------C-C-----------CChhHHHHHHHHHHhhc--CcceEEEE
Q 047961 100 DEILRMDSETTLKQEISWASHLSLQACLLPSP-------K-G-----------ASCANYARCVNQILQSL--NNMQLWLR 158 (280)
Q Consensus 100 d~~ir~~S~~~L~~El~yA~~lgl~aviip~P-------~-~-----------~~~~~yAr~i~~~l~~~--~~~~iwI~ 158 (280)
++..|..+.+.+++-+..|.-+|.+.|++.+. . . ....++++.++++.... ..+++-++
T Consensus 81 ~~~~~~~~~~~~~~~i~~a~~lG~~~v~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lE 160 (301)
T 3cny_A 81 IRDGIEKASEAFEKHCQYLKAINAPVAVVSEQTYTIQRSDTANIFKDKPYFTDKEWDEVCKGLNHYGEIAAKYGLKVAYH 160 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECTTCCTTCSSCCTTTCCCCCCHHHHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred ChhhHHHHHHHHHHHHHHHHHcCCCEEEecCCCccccCcccCCcccccccCcHHHHHHHHHHHHHHHHHHHHcCCEEEEe
Confidence 46678899999999999999999999987631 0 0 01234556666655432 23444443
Q ss_pred EecccCCCCCCCCCCCCChHHHHHHHHHHhcCCCccEEEEEccCC----CCChhhhhhhcccCceEEEEeCC
Q 047961 159 IPLVKNDDDTMDFIPSGDSWELWNSFRLLCEHHSQLSVALDVLSS----LPSANSLGRWLGEPVRAAIIHTD 226 (280)
Q Consensus 159 lP~~~~~~~~~~~~~~~~~W~~Wn~iR~lc~y~~~L~VaL~l~~~----lP~~~~~~RWl~EPV~~lii~ts 226 (280)
- ... . ...+.+....+-...+ ++++++.|++..- -...+.++++ ++=|..+-+.-.
T Consensus 161 ~--~~~--~------~~~~~~~~~~l~~~~~-~~~vg~~~D~~h~~~~g~d~~~~l~~~-~~~i~~vHl~D~ 220 (301)
T 3cny_A 161 H--HMG--T------GIQTKEETDRLMANTD-PKLVGLLYDTGHIAVSDGDYMALLNAH-IDRVVHVHFKDV 220 (301)
T ss_dssp C--CTT--S------SSCSHHHHHHHHHTSC-TTTCEEEEEHHHHHHHHSCSHHHHHHH-GGGEEEEEECEE
T ss_pred c--CCC--c------ccCCHHHHHHHHHhCC-ccceeEEechHHHHHcCCCHHHHHHHH-HhheeEEEeecC
Confidence 2 110 0 1123332222222233 4789999998731 1123445554 677888888654
No 28
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=56.09 E-value=4.6 Score=23.21 Aligned_cols=19 Identities=21% Similarity=0.455 Sum_probs=14.6
Q ss_pred eccCCCCccccCCceeecc
Q 047961 259 SGKLNQWCSQCELGFCFRP 277 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~~ 277 (280)
+|.....|++|++.|-.+.
T Consensus 7 ~~~k~~~C~~C~k~f~~~~ 25 (37)
T 1p7a_A 7 TGIKPFQCPDCDRSFSRSD 25 (37)
T ss_dssp CCSSSBCCTTTCCCBSSHH
T ss_pred CCCCCccCCCCCcccCcHH
Confidence 3556688999999997553
No 29
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=54.76 E-value=4.9 Score=22.83 Aligned_cols=19 Identities=21% Similarity=0.377 Sum_probs=14.4
Q ss_pred eccCCCCccccCCceeecc
Q 047961 259 SGKLNQWCSQCELGFCFRP 277 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~~ 277 (280)
+|.....|++|++.|-.++
T Consensus 5 ~~~~~~~C~~C~k~f~~~~ 23 (36)
T 2elr_A 5 SSGKTHLCDMCGKKFKSKG 23 (36)
T ss_dssp CCCSSCBCTTTCCBCSSHH
T ss_pred CCCCCeecCcCCCCcCchH
Confidence 3556689999999996543
No 30
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=53.42 E-value=15 Score=30.98 Aligned_cols=186 Identities=13% Similarity=0.021 Sum_probs=103.2
Q ss_pred eeecccCC---CCChHHHHHhhhccCCCcEEEeccCCCCCCCccccccCCCCCCCCCCCCCCcccCCCCCcceEEEEecC
Q 047961 16 YCGVETDF---NDDMPHLLSFNLSSGGFDFVVASLMDPNYRPSLMEKDIGGGSHVLSFAGSDLVLSPSQWSSHVVGKISS 92 (280)
Q Consensus 16 ~~G~~~~~---~~dl~~~l~~a~~~~gydfv~~PIt~~~~~~~~~~~d~~~~~~~~p~~~sD~~L~~~~w~s~vVg~~S~ 92 (280)
.+|++... ..++.+.++.+. +.|||.|=+..... ......+ . ..-+....+.+. .+. .
T Consensus 6 ~lg~~~~~~~~~~~~~~~l~~~~-~~G~~~vEl~~~~~-~~~~~~~--~-----~~~l~~~gl~~~------~~~----~ 66 (275)
T 3qc0_A 6 GLSINLATIREQCGFAEAVDICL-KHGITAIAPWRDQV-AAIGLGE--A-----GRIVRANGLKLT------GLC----R 66 (275)
T ss_dssp TEEEEGGGGTTTCCHHHHHHHHH-HTTCCEEECBHHHH-HHHCHHH--H-----HHHHHHHTCEES------CEE----E
T ss_pred cceeeeeeccCCCCHHHHHHHHH-HcCCCEEEeccccc-cccCHHH--H-----HHHHHHcCCceE------Eee----c
Confidence 36666632 368899999999 99999998754211 0000000 0 000000011111 000 1
Q ss_pred CCCCCCccHHHHHhHHHHHHHHHHHHhhcCcceeeecC---CCC-C----ChhHHHHHHHHHHhhc--CcceEEEEEecc
Q 047961 93 WIDLDSEDEILRMDSETTLKQEISWASHLSLQACLLPS---PKG-A----SCANYARCVNQILQSL--NNMQLWLRIPLV 162 (280)
Q Consensus 93 WidlDS~d~~ir~~S~~~L~~El~yA~~lgl~aviip~---P~~-~----~~~~yAr~i~~~l~~~--~~~~iwI~lP~~ 162 (280)
..++.++|+..|+.+.+.+++-++.|.-+|.+.|++.+ |.. . ...++++.++++.... ..+++.++- +.
T Consensus 67 ~~~~~~~d~~~r~~~~~~~~~~i~~a~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lE~-~~ 145 (275)
T 3qc0_A 67 GGFFPAPDASGREKAIDDNRRAVDEAAELGADCLVLVAGGLPGGSKNIDAARRMVVEGIAAVLPHARAAGVPLAIEP-LH 145 (275)
T ss_dssp EECCCCSSHHHHHHHHHHHHHHHHHHHHTTCSCEEEECBCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEECC-CC
T ss_pred CCCcCCCCHHHHHHHHHHHHHHHHHHHHhCCCEEEEeeCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHcCCEEEEeE-CC
Confidence 12567899999999999999999999999999998864 211 1 2334566666665422 234555541 11
Q ss_pred cCCCCCCCCCCCCChHHHHHHHHHHhcCCCccEEEEEccCCCCC---hhhhhhhcc-cCceEEEEeCC
Q 047961 163 KNDDDTMDFIPSGDSWELWNSFRLLCEHHSQLSVALDVLSSLPS---ANSLGRWLG-EPVRAAIIHTD 226 (280)
Q Consensus 163 ~~~~~~~~~~~~~~~W~~Wn~iR~lc~y~~~L~VaL~l~~~lP~---~~~~~RWl~-EPV~~lii~ts 226 (280)
....... ....+..+.+..++. .+. ++++.+++..-.-. .+.+++... +-|+.+-+.-.
T Consensus 146 ~~~~~~~--~~~~~~~~~~~l~~~-~~~--~vg~~~D~~h~~~~~d~~~~l~~~~~~~~i~~vH~~D~ 208 (275)
T 3qc0_A 146 PMYAADR--ACVNTLGQALDICET-LGP--GVGVAIDVYHVWWDPDLANQIARAGKMKAILAHHICDW 208 (275)
T ss_dssp GGGTTTT--BSCCCHHHHHHHHHH-HCT--TEEEEEEHHHHTTCTTHHHHHHHHHHTTCEEEEEECBC
T ss_pred CcccCCc--cccCCHHHHHHHHHH-hCc--ccEEEEEhhhheeCCCHHHHHHHcCccceEEEEEecCC
Confidence 0000000 002245555555554 444 89999998842222 234555433 78999998875
No 31
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=52.36 E-value=4.1 Score=22.96 Aligned_cols=17 Identities=24% Similarity=0.417 Sum_probs=13.3
Q ss_pred ccCCCCccccCCceeec
Q 047961 260 GKLNQWCSQCELGFCFR 276 (280)
Q Consensus 260 g~~~~~~~~~~~~~~~~ 276 (280)
|.....|++|++.|-.+
T Consensus 4 ~~k~~~C~~C~k~f~~~ 20 (35)
T 2elx_A 4 GSSGYVCALCLKKFVSS 20 (35)
T ss_dssp CCCSEECSSSCCEESSH
T ss_pred CCCCeECCCCcchhCCH
Confidence 55567899999999654
No 32
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=52.24 E-value=2.6 Score=26.06 Aligned_cols=18 Identities=17% Similarity=0.340 Sum_probs=14.5
Q ss_pred eccCCCCccccCCceeec
Q 047961 259 SGKLNQWCSQCELGFCFR 276 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~ 276 (280)
.|.....|++|+|+|--+
T Consensus 4 ~gekp~~C~~CgK~F~~~ 21 (36)
T 1fv5_A 4 LKPARFMCLPCGIAFSSP 21 (36)
T ss_dssp SSCCCCEETTTTEECSCH
T ss_pred CCccCeECCCCCCccCCH
Confidence 466778999999999644
No 33
>1xim_A D-xylose isomerase; isomerase(intramolecular oxidoreductse); HET: XYL; 2.20A {Actinoplanes missouriensis} SCOP: c.1.15.3 PDB: 4xim_A 5xim_A* 6xim_A* 7xim_A 8xim_A* 9xim_A* 3xin_A 2xim_A* 5xin_A* 1xin_A* 1bhw_A* 2xin_A* 3xim_A*
Probab=51.86 E-value=22 Score=32.78 Aligned_cols=124 Identities=8% Similarity=0.070 Sum_probs=73.3
Q ss_pred CCCCccHHHHHhHHHHHHHHHHHHhhcCcceeeecCCCC-----------CChhHHHHHHHHHHhhcC----cceEEEEE
Q 047961 95 DLDSEDEILRMDSETTLKQEISWASHLSLQACLLPSPKG-----------ASCANYARCVNQILQSLN----NMQLWLRI 159 (280)
Q Consensus 95 dlDS~d~~ir~~S~~~L~~El~yA~~lgl~aviip~P~~-----------~~~~~yAr~i~~~l~~~~----~~~iwI~l 159 (280)
.+.|+|+.+|+.+.+.+++-+..|.-||.+.|++-+... ....++++.++++..... .+++.|+-
T Consensus 102 ~l~spd~~~r~~~i~~~~~~i~~A~~LGa~~vv~~~G~~g~~~~~~~~~~~~~~~~~e~L~~l~~~A~~~g~gv~l~lE~ 181 (393)
T 1xim_A 102 GFTSNDRSVRRYAIRKVLRQMDLGAELGAKTLVLWGGREGAEYDSAKDVSAALDRYREALNLLAQYSEDRGYGLRFAIEP 181 (393)
T ss_dssp STTCSSHHHHHHHHHHHHHHHHHHHHHTCCEEEEECTTSEESSGGGCCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEC
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCCCCCcCCccCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEec
Confidence 577899999999999999999999999999998854211 113456677776664322 35555543
Q ss_pred ecccCCCCCCCCCCCCChHHHHHHHHHHhc-C-CCc-cEEEEEccCC-CCC---hhhhhhhc-ccCceEEEEeCC
Q 047961 160 PLVKNDDDTMDFIPSGDSWELWNSFRLLCE-H-HSQ-LSVALDVLSS-LPS---ANSLGRWL-GEPVRAAIIHTD 226 (280)
Q Consensus 160 P~~~~~~~~~~~~~~~~~W~~Wn~iR~lc~-y-~~~-L~VaL~l~~~-lP~---~~~~~RWl-~EPV~~lii~ts 226 (280)
--..+. .. ....+++ ....+++ + +++ +++.+++..- ... .+.+++.. ..-|..+-+...
T Consensus 182 ~~~~~~--~~---~~~~t~~---~~~~ll~~v~~~~~vgl~lD~gH~~~~g~d~~~~l~~~~~~~~i~~vHl~D~ 248 (393)
T 1xim_A 182 KPNEPR--GD---ILLPTAG---HAIAFVQELERPELFGINPETGHEQMSNLNFTQGIAQALWHKKLFHIDLNGQ 248 (393)
T ss_dssp CSSSSS--SE---ESSCSHH---HHHHHHTTSSSGGGEEECCBHHHHHTTTCCHHHHHHHHHHHTCBCCCEECBC
T ss_pred CCCCCC--CC---CcCCCHH---HHHHHHHHhCCccceEEEEccCCccccCCCHHHHHHHhhhcCCEEEEEeCCC
Confidence 110000 00 0112333 2223332 2 345 9999998742 222 23455544 367888877654
No 34
>1xla_A D-xylose isomerase; isomerase(intramolecular oxidoreductase); 2.30A {Arthrobacter SP} SCOP: c.1.15.3 PDB: 1die_A* 1did_A 1xlb_A 1xlc_A* 1xld_A* 1xle_A 1xlf_A* 1xlg_A* 1xlh_A 1xli_A* 1xlj_A* 1xlk_A 1xll_A 1xlm_A* 4xia_A* 5xia_A*
Probab=50.65 E-value=17 Score=33.58 Aligned_cols=125 Identities=10% Similarity=0.049 Sum_probs=71.8
Q ss_pred CCCCccHHHHHhHHHHHHHHHHHHhhcCcceeeecCCCC-----------CChhHHHHHHHHHHhhcC--c--ceEEEEE
Q 047961 95 DLDSEDEILRMDSETTLKQEISWASHLSLQACLLPSPKG-----------ASCANYARCVNQILQSLN--N--MQLWLRI 159 (280)
Q Consensus 95 dlDS~d~~ir~~S~~~L~~El~yA~~lgl~aviip~P~~-----------~~~~~yAr~i~~~l~~~~--~--~~iwI~l 159 (280)
++.++|+.+|+.+.+.+++.++.|.-||.+.|++-+... ....++++.++++..... . +++-++-
T Consensus 102 ~l~~~d~~~r~~~i~~~~~~i~~A~~LGa~~vvv~~G~~g~~~~~~~~~~~~~~~~~e~L~~l~~~A~~~G~~v~l~lE~ 181 (394)
T 1xla_A 102 GFTSNDRSIRRFALAKVLHNIDLAAEMGAETFVMWGGREGSEYDGSKDLAAALDRMREGVDTAAGYIKDKGYNLRIALEP 181 (394)
T ss_dssp STTCSSHHHHHHHHHHHHHHHHHHHHTTCSEEEECCTTCEESSGGGCCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEECC
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCCCccccccccCHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence 577899999999999999999999999999998853211 123445666666553221 2 4444431
Q ss_pred ecccCCCCCCCCCCCCChH-HHHHHHHHHhcCCCccEEEEEccC----CCCChhhhhhhc-ccCceEEEEeC
Q 047961 160 PLVKNDDDTMDFIPSGDSW-ELWNSFRLLCEHHSQLSVALDVLS----SLPSANSLGRWL-GEPVRAAIIHT 225 (280)
Q Consensus 160 P~~~~~~~~~~~~~~~~~W-~~Wn~iR~lc~y~~~L~VaL~l~~----~lP~~~~~~RWl-~EPV~~lii~t 225 (280)
+..... .. ....++ +.+..++ ..++..++++.|++.. .....+.+.+-. ++-|+.+-+.-
T Consensus 182 -~~~e~~-~~---~~~~t~~~~~~li~-~v~~pn~vgl~lD~~H~~~~g~d~~~~i~~~~~~~rI~~vHl~D 247 (394)
T 1xla_A 182 -KPNEPR-GD---IFLPTVGHGLAFIE-QLEHGDIVGLNPETGHEQMAGLNFTHGIAQALWAEKLFHIDLNG 247 (394)
T ss_dssp -CSSSSS-SE---ESSCSHHHHHHHHT-TCTTGGGEEECCBHHHHHTTTCCHHHHHHHHHHTTCBCCCEECB
T ss_pred -CCCCCC-cc---ccCCCHHHHHHHHH-HhCCCCceEEEEecCcccccCCCHHHHHHHHhccCceeEEEecC
Confidence 110000 00 011233 3333332 2232225999999863 221233556643 57788888875
No 35
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=49.41 E-value=4.7 Score=22.84 Aligned_cols=18 Identities=28% Similarity=0.469 Sum_probs=13.6
Q ss_pred ccCCCCccccCCceeecc
Q 047961 260 GKLNQWCSQCELGFCFRP 277 (280)
Q Consensus 260 g~~~~~~~~~~~~~~~~~ 277 (280)
|.....|++|++.|-.++
T Consensus 4 ~~k~~~C~~C~k~f~~~~ 21 (35)
T 1srk_A 4 GKRPFVCRICLSAFTTKA 21 (35)
T ss_dssp CCSCEECSSSCCEESSHH
T ss_pred CCcCeeCCCCCcccCCHH
Confidence 455678999999996543
No 36
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=47.23 E-value=5.9 Score=20.86 Aligned_cols=14 Identities=21% Similarity=0.496 Sum_probs=11.2
Q ss_pred CCccccCCceeecc
Q 047961 264 QWCSQCELGFCFRP 277 (280)
Q Consensus 264 ~~~~~~~~~~~~~~ 277 (280)
..|++|++.|..++
T Consensus 3 ~~C~~C~~~f~~~~ 16 (29)
T 2m0e_A 3 HKCPHCDKKFNQVG 16 (29)
T ss_dssp CCCSSCCCCCCTTT
T ss_pred CcCCCCCcccCCHH
Confidence 56999999997654
No 37
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=46.69 E-value=4.4 Score=23.63 Aligned_cols=18 Identities=22% Similarity=0.394 Sum_probs=13.6
Q ss_pred ccCCCCccccCCceeecc
Q 047961 260 GKLNQWCSQCELGFCFRP 277 (280)
Q Consensus 260 g~~~~~~~~~~~~~~~~~ 277 (280)
|.....|++|+++|-.++
T Consensus 6 ~~k~~~C~~C~k~f~~~~ 23 (37)
T 2elm_A 6 SGHLYYCSQCHYSSITKN 23 (37)
T ss_dssp SSCEEECSSSSCEEECHH
T ss_pred CCcCeECCCCCcccCCHH
Confidence 445578999999997653
No 38
>2qw5_A Xylose isomerase-like TIM barrel; putative sugar phosphate isomerase/epimerase; 1.78A {Anabaena variabilis atcc 29413}
Probab=46.50 E-value=19 Score=31.86 Aligned_cols=225 Identities=10% Similarity=0.038 Sum_probs=116.5
Q ss_pred eeeecccCC------CCChH------HHHHhhhccCCCcEEEeccCCCCCCCc-cccccCCCCCCC-CCCCCCCcc---c
Q 047961 15 RYCGVETDF------NDDMP------HLLSFNLSSGGFDFVVASLMDPNYRPS-LMEKDIGGGSHV-LSFAGSDLV---L 77 (280)
Q Consensus 15 ~~~G~~~~~------~~dl~------~~l~~a~~~~gydfv~~PIt~~~~~~~-~~~~d~~~~~~~-~p~~~sD~~---L 77 (280)
..+|+.... ..++. +.++.+. +.|||.|=+....+...+. ....+. ... .-+...++. +
T Consensus 9 mklg~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~G~~~vEl~~~~~~~~~~~~~~~~~---~~l~~~l~~~gL~~~~i 84 (335)
T 2qw5_A 9 SDIYISFFMFTTNLQPDNLDYRRIVVAHIKKLQ-RFGYSGFEFPIAPGLPENYAQDLENY---TNLRHYLDSEGLENVKI 84 (335)
T ss_dssp CCEEEEGGGTCSCCCTTCHHHHHHHHHHHHHHH-HTTCCEEEEECCCCCGGGHHHHHHHH---HHHHHHHHHTTCTTCEE
T ss_pred cceeEEEeeecCCCChhhhhccchHHHHHHHHH-HhCCCEEEEecCCCcccccccchHHH---HHHHHHHHHCCCCccee
Confidence 446776631 13566 8999999 9999999998776533210 000000 000 000000111 1
Q ss_pred CCCCCcceEEEEecCCCCCCCccHHHHHhHHHHHHHHHHHHhhcCcceeeecC--C--C--CC-----------------
Q 047961 78 SPSQWSSHVVGKISSWIDLDSEDEILRMDSETTLKQEISWASHLSLQACLLPS--P--K--GA----------------- 134 (280)
Q Consensus 78 ~~~~w~s~vVg~~S~WidlDS~d~~ir~~S~~~L~~El~yA~~lgl~aviip~--P--~--~~----------------- 134 (280)
.+ +++ .+.-.++.|+|+..|..+.+.+++-++.|.-||.+.|+.|. + . +.
T Consensus 85 ~~------~~~-~~~~~~l~~~d~~~r~~~~~~~~~~i~~A~~lG~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 157 (335)
T 2qw5_A 85 ST------NVG-ATRTFDPSSNYPEQRQEALEYLKSRVDITAALGGEIMMGPIVIPYGVFPTTDFNEPIWSDELQEHLKV 157 (335)
T ss_dssp EE------ECC-CCSSSCTTCSSHHHHHHHHHHHHHHHHHHHHTTCSEEEECCSSCTTCCCBCTTCCBCCHHHHHHHHHH
T ss_pred EE------Eec-cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEeccccCccccccCCcccccccccchhhhHHH
Confidence 11 001 12235788999999999999999999999999999996542 1 1 00
Q ss_pred ChhHHHHHHHHHHhhcC--cceEEEEEecccCCCCCCCCCCCCChHHHHHHHHHHhcCCCccEEEEEccC----CCCCh-
Q 047961 135 SCANYARCVNQILQSLN--NMQLWLRIPLVKNDDDTMDFIPSGDSWELWNSFRLLCEHHSQLSVALDVLS----SLPSA- 207 (280)
Q Consensus 135 ~~~~yAr~i~~~l~~~~--~~~iwI~lP~~~~~~~~~~~~~~~~~W~~Wn~iR~lc~y~~~L~VaL~l~~----~lP~~- 207 (280)
...++++.++++..... .+.+-++- ...-+.. ...+.-+....++ ..+ ++++++.+++.. .-...
T Consensus 158 ~~~~~~~~l~~l~~~a~~~Gv~l~lE~--~~~~~~~----~~~t~~~~~~ll~-~v~-~~~vgl~~D~~H~~~~g~d~~~ 229 (335)
T 2qw5_A 158 RYANAQPILDKLGEYAEIKKVKLAIEP--ITHWETP----GPNKLSQLIEFLK-GVK-SKQVGVVIDSAHEILDGEGPEI 229 (335)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCEEEECC--CCTTTCS----SCCSHHHHHHHHT-TCC-CTTEEEEEEHHHHHHHCCCHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCEEEEee--CCccccc----ccCCHHHHHHHHH-hcC-CCCeeEEEecccchhccCChHH
Confidence 12345556666553322 23333321 1000000 0112333333222 223 468999999873 21123
Q ss_pred --hhhhhhcc-cCceEEEEeCCccccCCCCCcccCHHHHHHHHHHHh-cCceEEEeccC
Q 047961 208 --NSLGRWLG-EPVRAAIIHTDSFLTNARGYPCLSRRHQKLITGFLN-HSIQVVISGKL 262 (280)
Q Consensus 208 --~~~~RWl~-EPV~~lii~ts~F~tN~kGyPVLsK~hQ~~i~~~~r-~~~~iil~g~~ 262 (280)
+.+++..+ +-|.++-+...-...--.|. + ....+++.+-+ .+-.++|.-..
T Consensus 230 ~~~~l~~~~~~~ri~~vHlkD~~~~~~G~G~--i--d~~~i~~~L~~gy~G~~~~E~~~ 284 (335)
T 2qw5_A 230 FKTQVEYLAQQGRLHYVQVSPPDRGALHTSW--L--PWKSFLTPIVKVYDGPIAVEIFN 284 (335)
T ss_dssp HHHHHHHHHHHTCEEEEEECCTTSSCSSSSC--C--CHHHHHHHHHHHCCSCEEECCCC
T ss_pred HHHHHHHhCCcCCEEEEEECCCCCCCCCCCC--c--CHHHHHHHHHccCCccEEEEecC
Confidence 34444432 88999999765433322343 2 24555555554 23356665443
No 39
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=46.28 E-value=5 Score=23.06 Aligned_cols=19 Identities=26% Similarity=0.370 Sum_probs=14.5
Q ss_pred eccCCCCccccCCceeecc
Q 047961 259 SGKLNQWCSQCELGFCFRP 277 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~~ 277 (280)
+|.....|++|++.|-.+.
T Consensus 5 ~~~k~~~C~~C~k~f~~~~ 23 (37)
T 2elo_A 5 SSGRSYSCPVCEKSFSEDR 23 (37)
T ss_dssp CCCCCCEETTTTEECSSHH
T ss_pred CCCCCcCCCCCCCccCCHH
Confidence 4556688999999997543
No 40
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=45.84 E-value=6.3 Score=20.81 Aligned_cols=13 Identities=23% Similarity=0.051 Sum_probs=10.4
Q ss_pred CCccccCCceeec
Q 047961 264 QWCSQCELGFCFR 276 (280)
Q Consensus 264 ~~~~~~~~~~~~~ 276 (280)
..|++|++.|-.+
T Consensus 4 ~~C~~C~k~f~~~ 16 (27)
T 2kvh_A 4 FSCSLCPQRSRDF 16 (27)
T ss_dssp EECSSSSCEESSH
T ss_pred ccCCCcChhhCCH
Confidence 4699999998654
No 41
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=45.45 E-value=6.2 Score=22.38 Aligned_cols=18 Identities=17% Similarity=0.364 Sum_probs=13.5
Q ss_pred ccCCCCccccCCceeecc
Q 047961 260 GKLNQWCSQCELGFCFRP 277 (280)
Q Consensus 260 g~~~~~~~~~~~~~~~~~ 277 (280)
|.....|++|++.|-.++
T Consensus 6 ~~k~~~C~~C~k~f~~~~ 23 (36)
T 2elt_A 6 SGKPYKCPQCSYASAIKA 23 (36)
T ss_dssp CCCSEECSSSSCEESSHH
T ss_pred CCCCCCCCCCCcccCCHH
Confidence 445678999999996543
No 42
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=45.30 E-value=6.1 Score=22.69 Aligned_cols=18 Identities=22% Similarity=0.372 Sum_probs=13.7
Q ss_pred eccCCCCccccCCceeec
Q 047961 259 SGKLNQWCSQCELGFCFR 276 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~ 276 (280)
+|.....|++|++.|-.+
T Consensus 5 ~~~k~~~C~~C~k~f~~~ 22 (37)
T 2elp_A 5 SSGRAMKCPYCDFYFMKN 22 (37)
T ss_dssp CCCCCEECSSSSCEECSS
T ss_pred CCCCCeECCCCChhhccC
Confidence 345567899999999654
No 43
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=45.26 E-value=6.4 Score=20.85 Aligned_cols=13 Identities=31% Similarity=0.682 Sum_probs=10.5
Q ss_pred CCccccCCceeec
Q 047961 264 QWCSQCELGFCFR 276 (280)
Q Consensus 264 ~~~~~~~~~~~~~ 276 (280)
..|++|++.|-.+
T Consensus 4 ~~C~~C~k~f~~~ 16 (28)
T 2kvf_A 4 YSCSVCGKRFSLK 16 (28)
T ss_dssp EECSSSCCEESCH
T ss_pred ccCCCCCcccCCH
Confidence 5699999998654
No 44
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=44.69 E-value=6.3 Score=22.48 Aligned_cols=18 Identities=28% Similarity=0.257 Sum_probs=13.3
Q ss_pred ccCCCCccccCCceeecc
Q 047961 260 GKLNQWCSQCELGFCFRP 277 (280)
Q Consensus 260 g~~~~~~~~~~~~~~~~~ 277 (280)
|.....|++|++.|-.++
T Consensus 6 ~~k~~~C~~C~k~f~~~~ 23 (36)
T 2elv_A 6 SGLLYDCHICERKFKNEL 23 (36)
T ss_dssp CCCCEECSSSCCEESSHH
T ss_pred CCCCeECCCCCCccCCHH
Confidence 444578999999996543
No 45
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=44.05 E-value=7.3 Score=20.33 Aligned_cols=14 Identities=29% Similarity=0.586 Sum_probs=10.8
Q ss_pred CCccccCCceeecc
Q 047961 264 QWCSQCELGFCFRP 277 (280)
Q Consensus 264 ~~~~~~~~~~~~~~ 277 (280)
..|++|++.|-.++
T Consensus 2 ~~C~~C~k~f~~~~ 15 (27)
T 1znf_A 2 YKCGLCERSFVEKS 15 (27)
T ss_dssp CBCSSSCCBCSSHH
T ss_pred ccCCCCCCcCCCHH
Confidence 46999999997543
No 46
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=43.84 E-value=6.4 Score=20.92 Aligned_cols=14 Identities=21% Similarity=0.413 Sum_probs=10.9
Q ss_pred CCccccCCceeecc
Q 047961 264 QWCSQCELGFCFRP 277 (280)
Q Consensus 264 ~~~~~~~~~~~~~~ 277 (280)
..|++|++.|-.++
T Consensus 3 ~~C~~C~k~f~~~~ 16 (29)
T 1rik_A 3 FACPECPKRFMRSD 16 (29)
T ss_dssp EECSSSSCEESCSH
T ss_pred ccCCCCCchhCCHH
Confidence 46999999997654
No 47
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=43.66 E-value=86 Score=27.39 Aligned_cols=222 Identities=9% Similarity=-0.031 Sum_probs=112.0
Q ss_pred CceeeecccCCC-----CChHHHHHhhhccCCCcEEEeccCCCCCCCccccccCCCCCCCCCCCCCCc-----ccCCCCC
Q 047961 13 ESRYCGVETDFN-----DDMPHLLSFNLSSGGFDFVVASLMDPNYRPSLMEKDIGGGSHVLSFAGSDL-----VLSPSQW 82 (280)
Q Consensus 13 ~~~~~G~~~~~~-----~dl~~~l~~a~~~~gydfv~~PIt~~~~~~~~~~~d~~~~~~~~p~~~sD~-----~L~~~~w 82 (280)
....+|+..-+. .++.+.++.+. +.|||.|=+...+++...... . .+..++..+. .+.. .
T Consensus 19 ~~~~~g~~~~s~~~~~~~~l~~~l~~aa-~~G~~~VEl~~~~~~~~~~~~-~------~p~~~~~~~~~~l~~~l~~--~ 88 (305)
T 3obe_A 19 AGKKMGLQTYSLGQELLQDMPNGLNRLA-KAGYTDLEIFGYREDTGKFGD-Y------NPKNTTFIASKDYKKMVDD--A 88 (305)
T ss_dssp CCCCCEEEGGGGTHHHHTTHHHHHHHHH-HHTCCEEEECCBCTTTCCBCC-C----------CCCBCHHHHHHHHHH--T
T ss_pred cCCceEEEEEEchhhhhcCHHHHHHHHH-HcCCCEEEecccccccccccC-c------CcccccccCHHHHHHHHHH--C
Confidence 445678877322 37899999999 999999988765331100000 0 0000000010 0000 0
Q ss_pred cceEEEEecCCCCCCCccHHHHHhHHHHHHHHHHHHhhcCcceeeecCC-CCC---ChhHHHHHHHHHHhh--cCcceEE
Q 047961 83 SSHVVGKISSWIDLDSEDEILRMDSETTLKQEISWASHLSLQACLLPSP-KGA---SCANYARCVNQILQS--LNNMQLW 156 (280)
Q Consensus 83 ~s~vVg~~S~WidlDS~d~~ir~~S~~~L~~El~yA~~lgl~aviip~P-~~~---~~~~yAr~i~~~l~~--~~~~~iw 156 (280)
.=.+++...+. .+.+.++..+....+.+++.++.|.-+|.+.|+++.. ... ...++++.++++... ...+++.
T Consensus 89 GL~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~A~~lG~~~v~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~ 167 (305)
T 3obe_A 89 GLRISSSHLTP-SLREYTKENMPKFDEFWKKATDIHAELGVSCMVQPSLPRIENEDDAKVVSEIFNRAGEITKKAGILWG 167 (305)
T ss_dssp TCEEEEEBCCC-SCCCCCGGGHHHHHHHHHHHHHHHHHHTCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHHTTTCEEE
T ss_pred CCeEEEeeccc-cccccchhhHHHHHHHHHHHHHHHHHcCCCEEEeCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCEEE
Confidence 11122222221 2334567778888999999999999999999999752 111 234455666666532 2335555
Q ss_pred EEEecccCCCCCCC---C----C---CCCChHHHHHHHHHHhcCCCccEEEEEccC----CCCChhhhhhhcccCceEEE
Q 047961 157 LRIPLVKNDDDTMD---F----I---PSGDSWELWNSFRLLCEHHSQLSVALDVLS----SLPSANSLGRWLGEPVRAAI 222 (280)
Q Consensus 157 I~lP~~~~~~~~~~---~----~---~~~~~W~~Wn~iR~lc~y~~~L~VaL~l~~----~lP~~~~~~RWl~EPV~~li 222 (280)
++- +...-....+ . . ...++=+.+..+....+ ++++++.|++.. .-...+.+++ +++=|+++-
T Consensus 168 lEn-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~vg~~lD~~H~~~~g~d~~~~i~~-~~~ri~~vH 244 (305)
T 3obe_A 168 YHN-HSNEFKRVLKAGEKPEQNPNPWAPPKGTYIEELFLKNTD-PDKVMFELDVYWAVMGQQDPVEWMEN-YPNRFKLLH 244 (305)
T ss_dssp EEC-CSGGGSEECCTTCCCC--------CCSEEHHHHHHHHSC-TTTEEEEEEHHHHHHTTCCHHHHHHH-STTTEEEEE
T ss_pred Eec-CcccccccccccccccccccccccCCChHHHHHHHHhCC-cccEEEEEeHHHHHHcCCCHHHHHHH-hhCceeEEE
Confidence 431 1100000000 0 0 00011123444443333 467999999873 2222344555 467788888
Q ss_pred EeCCccccCC-CCCcccCHHHHHHHHHHHhcCc
Q 047961 223 IHTDSFLTNA-RGYPCLSRRHQKLITGFLNHSI 254 (280)
Q Consensus 223 i~ts~F~tN~-kGyPVLsK~hQ~~i~~~~r~~~ 254 (280)
+.- +..=- .| .+ ....+++.+-+.+-
T Consensus 245 lkD--~~~~G~~G--~i--d~~~i~~~L~~~gy 271 (305)
T 3obe_A 245 IKD--RWIIGDSG--MM--NFPNIFKKAYEIGI 271 (305)
T ss_dssp ECC--SSSTTCSS--SB--CHHHHHHHHHHHTC
T ss_pred ecc--CcCCCCCC--cc--CHHHHHHHHHHcCC
Confidence 876 33221 34 22 24566666655443
No 48
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=43.64 E-value=7.2 Score=20.62 Aligned_cols=13 Identities=23% Similarity=0.526 Sum_probs=10.5
Q ss_pred CCccccCCceeec
Q 047961 264 QWCSQCELGFCFR 276 (280)
Q Consensus 264 ~~~~~~~~~~~~~ 276 (280)
..|++|++.|-.+
T Consensus 3 ~~C~~C~~~f~~~ 15 (29)
T 1ard_A 3 FVCEVCTRAFARQ 15 (29)
T ss_dssp CBCTTTCCBCSSH
T ss_pred eECCCCCcccCCH
Confidence 5799999998654
No 49
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=43.30 E-value=16 Score=27.12 Aligned_cols=48 Identities=8% Similarity=0.054 Sum_probs=40.9
Q ss_pred cc-CceEEEEeCCccccCCCCCcccCHHHHHHHHHHHhcCceEEEeccC
Q 047961 215 GE-PVRAAIIHTDSFLTNARGYPCLSRRHQKLITGFLNHSIQVVISGKL 262 (280)
Q Consensus 215 ~E-PV~~lii~ts~F~tN~kGyPVLsK~hQ~~i~~~~r~~~~iil~g~~ 262 (280)
|+ +|+-++....++..++...|.-.+..++.++.+...++++.+-+.+
T Consensus 33 g~~~v~vff~~dgV~~~~~~~~~~~~~~~~~~l~~l~~~gv~v~~C~~~ 81 (117)
T 1jx7_A 33 SNLDLRLFLMSDAVTAGLRGQKPGEGYNIQQMLEILTAQNVPVKLCKTC 81 (117)
T ss_dssp TTCEEEEEECGGGGGGGBSCCCCSSSCCHHHHHHHHHHTTCCEEEEHHH
T ss_pred CCccEEEEEEchHHHHHhcCCCCCcCCCHHHHHHHHHHCCCEEEEeHHH
Confidence 66 8999999999999987777766688899999998899999997754
No 50
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=43.27 E-value=9.4 Score=22.47 Aligned_cols=19 Identities=26% Similarity=0.550 Sum_probs=14.8
Q ss_pred eccCCCCccccCCceeecc
Q 047961 259 SGKLNQWCSQCELGFCFRP 277 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~~ 277 (280)
+|.....|++|++.|-.++
T Consensus 7 ~~~k~~~C~~C~k~f~~~~ 25 (42)
T 2ytb_A 7 GGEKPYRCDQCGKAFSQKG 25 (42)
T ss_dssp CSCCSBCCTTTTCCBSSHH
T ss_pred CCCCCeeCCCccchhCCHH
Confidence 4666789999999997543
No 51
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=43.10 E-value=7.1 Score=22.25 Aligned_cols=17 Identities=24% Similarity=0.265 Sum_probs=12.9
Q ss_pred ccCCCCccccCCceeec
Q 047961 260 GKLNQWCSQCELGFCFR 276 (280)
Q Consensus 260 g~~~~~~~~~~~~~~~~ 276 (280)
|.....|++|++.|-.+
T Consensus 6 ~~k~~~C~~C~k~f~~~ 22 (36)
T 2elq_A 6 SGKPFKCSLCEYATRSK 22 (36)
T ss_dssp CCCSEECSSSSCEESCH
T ss_pred CCCCccCCCCCchhCCH
Confidence 44557899999999654
No 52
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=42.92 E-value=6.9 Score=22.90 Aligned_cols=18 Identities=22% Similarity=0.248 Sum_probs=13.5
Q ss_pred ccCCCCccccCCceeecc
Q 047961 260 GKLNQWCSQCELGFCFRP 277 (280)
Q Consensus 260 g~~~~~~~~~~~~~~~~~ 277 (280)
|.....|++|++.|-.++
T Consensus 3 ~~k~~~C~~C~k~f~~~~ 20 (39)
T 1njq_A 3 PPRSYTCSFCKREFRSAQ 20 (39)
T ss_dssp CSSSEECTTTCCEESSHH
T ss_pred CCCceECCCCCcccCCHH
Confidence 445578999999996543
No 53
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=41.95 E-value=1.5e+02 Score=24.66 Aligned_cols=189 Identities=12% Similarity=0.095 Sum_probs=99.5
Q ss_pred eecccC--CCCChHHHHHhhhccCCCcEEEeccCCCCCCCccc-cccCCCCCCCCCCCCCCcccCCCCCcceEEEEecCC
Q 047961 17 CGVETD--FNDDMPHLLSFNLSSGGFDFVVASLMDPNYRPSLM-EKDIGGGSHVLSFAGSDLVLSPSQWSSHVVGKISSW 93 (280)
Q Consensus 17 ~G~~~~--~~~dl~~~l~~a~~~~gydfv~~PIt~~~~~~~~~-~~d~~~~~~~~p~~~sD~~L~~~~w~s~vVg~~S~W 93 (280)
+|+... .--++.+.++.+. +.|||.|=+....+....... .+.. ..-+....+.+. -+...
T Consensus 6 ~~~~~~~~~~~~~~~~l~~~~-~~G~~~vEl~~~~~~~~~~~~~~~~~-----~~~l~~~gl~~~----------~~~~~ 69 (281)
T 3u0h_A 6 PCLHPTLVDETSLVLYLDLAR-ETGYRYVDVPFHWLEAEAERHGDAAV-----EAMFQRRGLVLA----------NLGLP 69 (281)
T ss_dssp EEECGGGTTCCCHHHHHHHHH-HTTCSEECCCHHHHHHHHHHHCHHHH-----HHHHHTTTCEEC----------CEECC
T ss_pred hhhcchhccCCCHHHHHHHHH-HcCCCEEEecHHHHHHHhcccCHHHH-----HHHHHHcCCceE----------Eeccc
Confidence 444442 3357899999999 999999977665421000000 0000 000001111111 11123
Q ss_pred CCCCCccHHHHHhHHHHHHHHHHHHhhcCcceeeecC-CCC-----CChhHHHHHHHHHHhhcC--cceEEEEEecccCC
Q 047961 94 IDLDSEDEILRMDSETTLKQEISWASHLSLQACLLPS-PKG-----ASCANYARCVNQILQSLN--NMQLWLRIPLVKND 165 (280)
Q Consensus 94 idlDS~d~~ir~~S~~~L~~El~yA~~lgl~aviip~-P~~-----~~~~~yAr~i~~~l~~~~--~~~iwI~lP~~~~~ 165 (280)
+++.++++.. +.+.+.+++.++.|.-+|.+.|.+.. |.. ....++++.++++..... .+++.++- ....
T Consensus 70 ~~~~~~~~~~-~~~~~~~~~~i~~A~~lG~~~v~~~~~p~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~--~~~~ 146 (281)
T 3u0h_A 70 LNLYDSEPVF-LRELSLLPDRARLCARLGARSVTAFLWPSMDEEPVRYISQLARRIRQVAVELLPLGMRVGLEY--VGPH 146 (281)
T ss_dssp SCTTSCHHHH-HHHHHTHHHHHHHHHHTTCCEEEEECCSEESSCHHHHHHHHHHHHHHHHHHHGGGTCEEEEEC--CCCG
T ss_pred ccccCCCHHH-HHHHHHHHHHHHHHHHcCCCEEEEeecCCCCCcchhhHHHHHHHHHHHHHHHHHcCCEEEEEe--cccc
Confidence 5666777764 46788999999999999999988542 221 123445666666664332 34444432 1100
Q ss_pred --CCCCCCCCCCChHHHHHHHHHHhcCCCccEEEEEccC----CCCChhhhhhhcccCceEEEEeCCcc
Q 047961 166 --DDTMDFIPSGDSWELWNSFRLLCEHHSQLSVALDVLS----SLPSANSLGRWLGEPVRAAIIHTDSF 228 (280)
Q Consensus 166 --~~~~~~~~~~~~W~~Wn~iR~lc~y~~~L~VaL~l~~----~lP~~~~~~RWl~EPV~~lii~ts~F 228 (280)
.... .....+..+.+..++.+ + ++++++.+++.. .-...+.++ =+++-|+.+-+.-...
T Consensus 147 ~~~~~~-~~~~~~~~~~~~l~~~v-~-~~~vg~~~D~~h~~~~g~~~~~~~~-~~~~~i~~vHl~D~~~ 211 (281)
T 3u0h_A 147 HLRHRR-YPFVQSLADLKTFWEAI-G-APNVGALVDSYHWYTAGEHEDDLAQ-LPPEKVVYVHINDTRD 211 (281)
T ss_dssp GGCCSS-EECCCSHHHHHHHHHHH-C-CTTEEEEEEHHHHHHTTCCHHHHHT-SCGGGEEEEEECBCSS
T ss_pred cccccc-ccccCCHHHHHHHHHHc-C-CCCeeEEeehhHHHHcCCCHHHHHh-cCcccEEEEEecCCCC
Confidence 0000 00022455566555543 3 578999999873 211223333 3567888888886543
No 54
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=41.75 E-value=7 Score=20.93 Aligned_cols=14 Identities=29% Similarity=0.548 Sum_probs=11.0
Q ss_pred CCccccCCceeecc
Q 047961 264 QWCSQCELGFCFRP 277 (280)
Q Consensus 264 ~~~~~~~~~~~~~~ 277 (280)
..|++|++.|-.++
T Consensus 3 ~~C~~C~k~f~~~~ 16 (30)
T 1paa_A 3 YACGLCNRAFTRRD 16 (30)
T ss_dssp SBCTTTCCBCSSSH
T ss_pred cCCcccCcccCChH
Confidence 56999999997553
No 55
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=47.75 E-value=5.5 Score=20.86 Aligned_cols=14 Identities=21% Similarity=0.503 Sum_probs=10.9
Q ss_pred CCccccCCceeecc
Q 047961 264 QWCSQCELGFCFRP 277 (280)
Q Consensus 264 ~~~~~~~~~~~~~~ 277 (280)
..|++|++.|--++
T Consensus 3 ~~C~~C~k~f~~~~ 16 (26)
T 2lvu_A 3 YVCERCGKRFVQSS 16 (26)
Confidence 46999999997543
No 56
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=41.54 E-value=7.6 Score=20.56 Aligned_cols=14 Identities=21% Similarity=0.361 Sum_probs=11.0
Q ss_pred CCccccCCceeecc
Q 047961 264 QWCSQCELGFCFRP 277 (280)
Q Consensus 264 ~~~~~~~~~~~~~~ 277 (280)
..|++|++.|-.++
T Consensus 3 ~~C~~C~k~f~~~~ 16 (30)
T 1klr_A 3 YQCQYCEFRSADSS 16 (30)
T ss_dssp CCCSSSSCCCSCSH
T ss_pred ccCCCCCCccCCHH
Confidence 57999999996543
No 57
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=41.34 E-value=6 Score=21.13 Aligned_cols=14 Identities=21% Similarity=0.375 Sum_probs=10.8
Q ss_pred CCccccCCceeecc
Q 047961 264 QWCSQCELGFCFRP 277 (280)
Q Consensus 264 ~~~~~~~~~~~~~~ 277 (280)
..|++|+++|-.++
T Consensus 4 ~~C~~C~k~f~~~~ 17 (27)
T 2kvg_A 4 YRCPLCRAGCPSLA 17 (27)
T ss_dssp EEETTTTEEESCHH
T ss_pred cCCCCCCcccCCHH
Confidence 46999999986543
No 58
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=40.62 E-value=11 Score=22.17 Aligned_cols=18 Identities=28% Similarity=0.519 Sum_probs=14.0
Q ss_pred eccCCCCccccCCceeec
Q 047961 259 SGKLNQWCSQCELGFCFR 276 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~ 276 (280)
+|.....|++|++.|-.+
T Consensus 6 ~~~k~~~C~~C~k~f~~~ 23 (42)
T 2yte_A 6 SGEKPYSCAECKETFSDN 23 (42)
T ss_dssp CSCCSCBCTTTCCBCSSH
T ss_pred CCCCCeECCCCCCccCCH
Confidence 455668899999999654
No 59
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=39.90 E-value=11 Score=22.23 Aligned_cols=19 Identities=21% Similarity=0.335 Sum_probs=14.4
Q ss_pred eccCCCCccccCCceeecc
Q 047961 259 SGKLNQWCSQCELGFCFRP 277 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~~ 277 (280)
+|.....|++|++.|-.++
T Consensus 7 ~~~k~~~C~~C~k~f~~~~ 25 (42)
T 2eos_A 7 GGEKPYPCEICGTRFRHLQ 25 (42)
T ss_dssp SSSCCBCCSSSCCCBSSHH
T ss_pred CCCCCEECCCCCCccCCHH
Confidence 4556688999999997543
No 60
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=39.75 E-value=12 Score=22.67 Aligned_cols=19 Identities=21% Similarity=0.442 Sum_probs=14.8
Q ss_pred eccCCCCccccCCceeecc
Q 047961 259 SGKLNQWCSQCELGFCFRP 277 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~~ 277 (280)
+|.....|++|++.|-.++
T Consensus 8 ~~~k~~~C~~C~k~F~~~~ 26 (46)
T 2enf_A 8 TGEKPYKCNECGKVFTQNS 26 (46)
T ss_dssp CCCCSCBCSSSCCBCSSHH
T ss_pred CCCcCeECCCCCcccCCHH
Confidence 4666789999999996543
No 61
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=39.64 E-value=8.6 Score=20.32 Aligned_cols=13 Identities=23% Similarity=0.424 Sum_probs=10.2
Q ss_pred CCccccCCceeec
Q 047961 264 QWCSQCELGFCFR 276 (280)
Q Consensus 264 ~~~~~~~~~~~~~ 276 (280)
..|++|++.|-.+
T Consensus 4 ~~C~~C~~~f~~~ 16 (30)
T 2m0d_A 4 YQCDYCGRSFSDP 16 (30)
T ss_dssp EECTTTCCEESCH
T ss_pred ccCCCCCcccCCH
Confidence 4699999998643
No 62
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=39.54 E-value=6.7 Score=22.34 Aligned_cols=18 Identities=22% Similarity=0.337 Sum_probs=13.2
Q ss_pred ccCCCCccccCCceeecc
Q 047961 260 GKLNQWCSQCELGFCFRP 277 (280)
Q Consensus 260 g~~~~~~~~~~~~~~~~~ 277 (280)
+.....|++|++.|-.++
T Consensus 6 ~~k~~~C~~C~k~f~~~~ 23 (36)
T 2els_A 6 SGKIFTCEYCNKVFKFKH 23 (36)
T ss_dssp CCCCEECTTTCCEESSHH
T ss_pred CCCCEECCCCCceeCCHH
Confidence 344578999999997543
No 63
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=39.49 E-value=10 Score=21.40 Aligned_cols=13 Identities=23% Similarity=0.462 Sum_probs=10.5
Q ss_pred CCccccCCceeec
Q 047961 264 QWCSQCELGFCFR 276 (280)
Q Consensus 264 ~~~~~~~~~~~~~ 276 (280)
..|++|++.|-.+
T Consensus 3 ~~C~~C~k~F~~~ 15 (33)
T 1rim_A 3 FACPECPKRFMRS 15 (33)
T ss_dssp CCCSSSCCCCSSH
T ss_pred ccCCCCCchhCCH
Confidence 5799999999654
No 64
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=39.45 E-value=12 Score=22.28 Aligned_cols=19 Identities=21% Similarity=0.487 Sum_probs=14.6
Q ss_pred eccCCCCccccCCceeecc
Q 047961 259 SGKLNQWCSQCELGFCFRP 277 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~~ 277 (280)
+|.....|++|++.|-.++
T Consensus 8 ~~~k~~~C~~C~k~f~~~~ 26 (44)
T 2en7_A 8 TGMKPYVCNECGKAFRSKS 26 (44)
T ss_dssp SSSSSSCCTTTCCCCSSHH
T ss_pred CCCcCeECCCCCCccCCHH
Confidence 4566789999999996543
No 65
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=39.19 E-value=9.4 Score=21.35 Aligned_cols=14 Identities=21% Similarity=0.368 Sum_probs=11.0
Q ss_pred CCccccCCceeecc
Q 047961 264 QWCSQCELGFCFRP 277 (280)
Q Consensus 264 ~~~~~~~~~~~~~~ 277 (280)
..|++|++.|-.++
T Consensus 3 ~~C~~C~k~f~~~~ 16 (32)
T 2kfq_A 3 FACPACPKRFMRSD 16 (32)
T ss_dssp SSSSSSCTTHHHHH
T ss_pred CCCCCCCcccCCHH
Confidence 57999999986543
No 66
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=39.17 E-value=12 Score=22.65 Aligned_cols=18 Identities=22% Similarity=0.459 Sum_probs=14.3
Q ss_pred eccCCCCccccCCceeec
Q 047961 259 SGKLNQWCSQCELGFCFR 276 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~ 276 (280)
+|.....|++|++.|-.+
T Consensus 8 ~~~k~~~C~~C~k~F~~~ 25 (46)
T 2yti_A 8 TGEKPYKCNECGKVFTQN 25 (46)
T ss_dssp SCCCTTCCSSSCCCCSSH
T ss_pred CCCcCeECCCCCcccCCh
Confidence 456678999999999654
No 67
>1muw_A Xylose isomerase; atomic resolution, disorder; 0.86A {Streptomyces olivochromogenes} SCOP: c.1.15.3 PDB: 1s5m_A* 1s5n_A* 2gyi_A* 1xyb_A* 1xyc_A* 1xya_A* 1xyl_A 1xym_A* 1dxi_A 3gnx_A* 1gw9_A* 1xib_A 1xic_A* 1xid_A* 1xie_A* 1xif_A* 1xig_A* 1xih_A* 1xii_A* 1xij_A ...
Probab=38.42 E-value=33 Score=31.42 Aligned_cols=123 Identities=8% Similarity=0.008 Sum_probs=72.2
Q ss_pred CCCCccHHHHHhHHHHHHHHHHHHhhcCcceeeecCCCC-------C----ChhHHHHHHHHHHhhcC--c--ceEEEEE
Q 047961 95 DLDSEDEILRMDSETTLKQEISWASHLSLQACLLPSPKG-------A----SCANYARCVNQILQSLN--N--MQLWLRI 159 (280)
Q Consensus 95 dlDS~d~~ir~~S~~~L~~El~yA~~lgl~aviip~P~~-------~----~~~~yAr~i~~~l~~~~--~--~~iwI~l 159 (280)
++.++|+.+|+.+.+.+++.++.|.-||.+.|++.+... . ...++++.++++..... . +++.++-
T Consensus 102 ~l~~~d~~~r~~~i~~~~~~i~~A~~LGa~~vvv~~g~~~~~~~~~~~~~~~~~~~~e~L~~l~~~A~~~G~~v~l~lE~ 181 (386)
T 1muw_A 102 GFTANDRDVRRYALRKTIRNIDLAVELGAKTYVAWGGREGAESGAAKDVRVALDRMKEAFDLLGEYVTSQGYDIRFAIEP 181 (386)
T ss_dssp STTCSSHHHHHHHHHHHHHHHHHHHHHTCSEEEECCTTCEESSTTSCCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEECC
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCCCcccccccCCHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEee
Confidence 578899999999999999999999999999998854221 1 12445666666653222 1 4444432
Q ss_pred ecccCCCCCCCCCCCCChHHHHHHHHHHhcC--CC-ccEEEEEccC----CCCChhhhhhhc-ccCceEEEEeC
Q 047961 160 PLVKNDDDTMDFIPSGDSWELWNSFRLLCEH--HS-QLSVALDVLS----SLPSANSLGRWL-GEPVRAAIIHT 225 (280)
Q Consensus 160 P~~~~~~~~~~~~~~~~~W~~Wn~iR~lc~y--~~-~L~VaL~l~~----~lP~~~~~~RWl-~EPV~~lii~t 225 (280)
+...... . ....+|+ ....+++- ++ ++++.|++.. .....+.+.+-. ++-|.++-+..
T Consensus 182 -~~~e~~~-~---~~~~t~~---~~~~li~~v~~pn~vgl~lD~~H~~~~g~d~~~~l~~~~~~~rI~~vHl~D 247 (386)
T 1muw_A 182 -KPNEPRG-D---ILLPTVG---HALAFIERLERPELYGVNPEVGHEQMAGLNFPHGIAQALWAGKLFHIDLNG 247 (386)
T ss_dssp -CSSSSSS-E---ESSCSHH---HHHHHHTTSSSGGGEEECCBHHHHHTTTCCHHHHHHHHHHTTCBCCCEECB
T ss_pred -CCCCCcc-c---ccCCCHH---HHHHHHHHhCCccceEEEeeccchhhcCCCHHHHHHHhcccCcEEEEEeCC
Confidence 1000000 0 0112333 33333432 34 4999999863 222233566654 47788888876
No 68
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=38.20 E-value=13 Score=22.50 Aligned_cols=19 Identities=32% Similarity=0.428 Sum_probs=14.5
Q ss_pred eccCCCCccccCCceeecc
Q 047961 259 SGKLNQWCSQCELGFCFRP 277 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~~ 277 (280)
+|.....|++|++.|-.++
T Consensus 8 ~~~k~~~C~~C~k~f~~~~ 26 (46)
T 2eoh_A 8 SGKKPYECKECRKTFIQIG 26 (46)
T ss_dssp CCSCSCCCSSSCCCCSSHH
T ss_pred CCCCCcCCCCcCchhCCHH
Confidence 4566789999999996543
No 69
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=37.71 E-value=9.8 Score=19.96 Aligned_cols=13 Identities=23% Similarity=0.503 Sum_probs=10.3
Q ss_pred CCccccCCceeec
Q 047961 264 QWCSQCELGFCFR 276 (280)
Q Consensus 264 ~~~~~~~~~~~~~ 276 (280)
..|++|++.|..+
T Consensus 3 ~~C~~C~k~f~~~ 15 (29)
T 2m0f_A 3 LKCRECGKQFTTS 15 (29)
T ss_dssp EECTTTSCEESCH
T ss_pred ccCCCCCCccCCh
Confidence 4699999998654
No 70
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=37.68 E-value=13 Score=22.49 Aligned_cols=18 Identities=28% Similarity=0.477 Sum_probs=14.4
Q ss_pred eccCCCCccccCCceeec
Q 047961 259 SGKLNQWCSQCELGFCFR 276 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~ 276 (280)
+|.....|++|++.|-.+
T Consensus 8 ~~~k~~~C~~C~k~F~~~ 25 (46)
T 2eom_A 8 HGERGHRCSDCGKFFLQA 25 (46)
T ss_dssp CCCSSCCCSSSCCCCSSH
T ss_pred CCCCCcCCCCCCCeeCCh
Confidence 466678999999999654
No 71
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=37.59 E-value=9.4 Score=22.99 Aligned_cols=18 Identities=28% Similarity=0.674 Sum_probs=14.0
Q ss_pred eccCCCCccccCCceeec
Q 047961 259 SGKLNQWCSQCELGFCFR 276 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~ 276 (280)
+|.....|++|++.|-.+
T Consensus 8 ~~~k~~~C~~C~k~F~~~ 25 (44)
T 2epv_A 8 SGEKPYECNECGKAFIWK 25 (44)
T ss_dssp CCCCSEECSSSCCEESSH
T ss_pred CCCcCeECCCCCcccCch
Confidence 456668899999999654
No 72
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=37.56 E-value=9.2 Score=22.59 Aligned_cols=19 Identities=32% Similarity=0.503 Sum_probs=14.2
Q ss_pred eccCCCCccccCCceeecc
Q 047961 259 SGKLNQWCSQCELGFCFRP 277 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~~ 277 (280)
+|.....|++|++.|-.++
T Consensus 6 ~~~k~~~C~~C~k~f~~~~ 24 (42)
T 2el5_A 6 SGENPYECSECGKAFNRKD 24 (42)
T ss_dssp SSCCSEECSSSCCEESSHH
T ss_pred CCCCCccCCCcChhhCCHH
Confidence 3556678999999996543
No 73
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=37.49 E-value=13 Score=22.38 Aligned_cols=19 Identities=21% Similarity=0.483 Sum_probs=14.7
Q ss_pred eccCCCCccccCCceeecc
Q 047961 259 SGKLNQWCSQCELGFCFRP 277 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~~ 277 (280)
+|.....|++|++.|-.++
T Consensus 8 ~~~k~~~C~~C~k~f~~~~ 26 (46)
T 2eq2_A 8 TGGKPYQCNECGKAFSQTS 26 (46)
T ss_dssp SSSCSSSCCSSCCCCSSHH
T ss_pred CCCCCeECCCCCcccCCHH
Confidence 4566789999999997543
No 74
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=37.36 E-value=9.5 Score=22.45 Aligned_cols=18 Identities=28% Similarity=0.505 Sum_probs=13.5
Q ss_pred eccCCCCccccCCceeec
Q 047961 259 SGKLNQWCSQCELGFCFR 276 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~ 276 (280)
+|.....|++|++.|-.+
T Consensus 6 ~~~k~~~C~~C~k~f~~~ 23 (41)
T 2ept_A 6 SGQRVYECQECGKSFRQK 23 (41)
T ss_dssp CCCCCEECSSSCCEESSH
T ss_pred CCCCCeECCCCCCCcCCH
Confidence 355567899999999654
No 75
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=37.06 E-value=13 Score=22.38 Aligned_cols=18 Identities=22% Similarity=0.508 Sum_probs=14.3
Q ss_pred eccCCCCccccCCceeec
Q 047961 259 SGKLNQWCSQCELGFCFR 276 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~ 276 (280)
+|.....|++|++.|-.+
T Consensus 8 ~~~k~~~C~~C~k~f~~~ 25 (46)
T 2eq1_A 8 TGEKPYKCNECGKAFRAH 25 (46)
T ss_dssp CCSCCCCCTTTTCCCSSH
T ss_pred CCCCCeECCcCChhhCCH
Confidence 466678999999999654
No 76
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=36.87 E-value=14 Score=22.41 Aligned_cols=19 Identities=21% Similarity=0.358 Sum_probs=14.7
Q ss_pred eccCCCCccccCCceeecc
Q 047961 259 SGKLNQWCSQCELGFCFRP 277 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~~ 277 (280)
+|.....|++|++.|-.++
T Consensus 8 ~~~k~~~C~~C~k~f~~~~ 26 (46)
T 2em6_A 8 MGEKCYKCDVCGKEFSQSS 26 (46)
T ss_dssp CCCCCCBCSSSCCBCSSHH
T ss_pred CCCCCeECCCCCcccCCHH
Confidence 4566789999999996543
No 77
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=36.46 E-value=14 Score=22.33 Aligned_cols=18 Identities=28% Similarity=0.571 Sum_probs=14.1
Q ss_pred eccCCCCccccCCceeec
Q 047961 259 SGKLNQWCSQCELGFCFR 276 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~ 276 (280)
+|.....|++|++.|-.+
T Consensus 8 ~~~k~~~C~~C~k~f~~~ 25 (46)
T 2emg_A 8 TGENPFICSECGKVFTHK 25 (46)
T ss_dssp CSCCSCBCTTTCCBCSSH
T ss_pred CCCCCEECCccCcccCCH
Confidence 456668999999999654
No 78
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=36.40 E-value=13 Score=22.18 Aligned_cols=18 Identities=22% Similarity=0.407 Sum_probs=14.0
Q ss_pred eccCCCCccccCCceeec
Q 047961 259 SGKLNQWCSQCELGFCFR 276 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~ 276 (280)
+|.....|++|++.|-.+
T Consensus 8 ~~~~~~~C~~C~k~f~~~ 25 (44)
T 2eou_A 8 AAKTTSECQECGKIFRHS 25 (44)
T ss_dssp SSSCCCCCTTTCCCCSSH
T ss_pred CCCcCeECCCCCcccCCH
Confidence 455668899999999654
No 79
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=36.38 E-value=14 Score=22.27 Aligned_cols=19 Identities=26% Similarity=0.480 Sum_probs=14.6
Q ss_pred eccCCCCccccCCceeecc
Q 047961 259 SGKLNQWCSQCELGFCFRP 277 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~~ 277 (280)
+|.....|++|++.|-.++
T Consensus 8 ~~~k~~~C~~C~k~f~~~~ 26 (46)
T 2yth_A 8 SGEKPFQCEECGKRFTQNS 26 (46)
T ss_dssp CCSSSBCCSSSCCCBSSHH
T ss_pred CCCcCCCCCCCCcccCCHH
Confidence 4566789999999996543
No 80
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=36.33 E-value=14 Score=22.19 Aligned_cols=19 Identities=26% Similarity=0.520 Sum_probs=14.8
Q ss_pred eccCCCCccccCCceeecc
Q 047961 259 SGKLNQWCSQCELGFCFRP 277 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~~ 277 (280)
+|.....|++|++.|-.++
T Consensus 8 ~~~k~~~C~~C~k~f~~~~ 26 (46)
T 2ep1_A 8 TGEKPYECSDCGKSFIKKS 26 (46)
T ss_dssp SSCCSSCCSSSCCCCSSHH
T ss_pred CCCCCcCCCCCCchhCCHH
Confidence 4666789999999997543
No 81
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=36.21 E-value=14 Score=22.33 Aligned_cols=19 Identities=21% Similarity=0.510 Sum_probs=14.7
Q ss_pred eccCCCCccccCCceeecc
Q 047961 259 SGKLNQWCSQCELGFCFRP 277 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~~ 277 (280)
+|.....|++|++.|-.+.
T Consensus 8 ~~~k~~~C~~C~k~F~~~~ 26 (46)
T 2enh_A 8 TGEKPYECDVCRKAFSHHA 26 (46)
T ss_dssp CCSSSCBCTTTCCBCSSSH
T ss_pred CCCCCcCCCCcCchhCCHH
Confidence 4566788999999997543
No 82
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=35.97 E-value=10 Score=22.27 Aligned_cols=19 Identities=32% Similarity=0.601 Sum_probs=14.3
Q ss_pred eccCCCCccccCCceeecc
Q 047961 259 SGKLNQWCSQCELGFCFRP 277 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~~ 277 (280)
+|.....|++|++.|-.++
T Consensus 7 ~~~~~~~C~~C~k~f~~~~ 25 (42)
T 2epc_A 7 GGETPYLCGQCGKSFTQRG 25 (42)
T ss_dssp CSSCCEECSSSCCEESSHH
T ss_pred CCCCCeECCCCCcccCCHH
Confidence 4556678999999996543
No 83
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=35.97 E-value=10 Score=22.38 Aligned_cols=19 Identities=21% Similarity=0.403 Sum_probs=14.4
Q ss_pred eccCCCCccccCCceeecc
Q 047961 259 SGKLNQWCSQCELGFCFRP 277 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~~ 277 (280)
+|.....|++|++.|-.++
T Consensus 7 ~~~k~~~C~~C~k~f~~~~ 25 (42)
T 2en2_A 7 GGEKPYKCETCGARFVQVA 25 (42)
T ss_dssp CSSCSEECTTTCCEESSHH
T ss_pred CCCCCEeCCCcChhhCCHH
Confidence 4566678999999996543
No 84
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=42.06 E-value=7.7 Score=20.70 Aligned_cols=14 Identities=21% Similarity=0.411 Sum_probs=11.0
Q ss_pred CCccccCCceeecc
Q 047961 264 QWCSQCELGFCFRP 277 (280)
Q Consensus 264 ~~~~~~~~~~~~~~ 277 (280)
..|++|++.|-.++
T Consensus 3 ~~C~~C~k~f~~~~ 16 (29)
T 2lvt_A 3 CQCVMCGKAFTQAS 16 (29)
Confidence 46999999997654
No 85
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=35.39 E-value=15 Score=22.23 Aligned_cols=18 Identities=39% Similarity=0.678 Sum_probs=14.2
Q ss_pred eccCCCCccccCCceeec
Q 047961 259 SGKLNQWCSQCELGFCFR 276 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~ 276 (280)
+|.....|++|++.|-.+
T Consensus 8 ~~~k~~~C~~C~k~f~~~ 25 (46)
T 2emz_A 8 SGERPFKCNECGKGFGRR 25 (46)
T ss_dssp SCCCSCCCSSSCCCCSSH
T ss_pred CCCCCeECCCCCcccCCH
Confidence 456678999999999654
No 86
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=35.12 E-value=15 Score=22.30 Aligned_cols=18 Identities=22% Similarity=0.466 Sum_probs=14.0
Q ss_pred eccCCCCccccCCceeec
Q 047961 259 SGKLNQWCSQCELGFCFR 276 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~ 276 (280)
+|.....|++|++.|-.+
T Consensus 8 ~~~k~~~C~~C~k~f~~~ 25 (46)
T 2eon_A 8 TGEKPYKCQVCGKAFRVS 25 (46)
T ss_dssp SSCCSCBCSSSCCBCSSH
T ss_pred CCCcccCCCCCCcccCcH
Confidence 456668899999999654
No 87
>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=34.64 E-value=15 Score=21.92 Aligned_cols=18 Identities=28% Similarity=0.654 Sum_probs=13.9
Q ss_pred eccCCCCccccCCceeec
Q 047961 259 SGKLNQWCSQCELGFCFR 276 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~ 276 (280)
+|.....|++|++.|-.+
T Consensus 6 ~~~k~~~C~~C~k~f~~~ 23 (43)
T 2yrm_A 6 SGNGAFFCNECDCRFSEE 23 (43)
T ss_dssp SSSCCBCCSSSCCCBSSH
T ss_pred CCCCCEECCCCCCeeCCh
Confidence 355668899999999654
No 88
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=34.50 E-value=15 Score=22.16 Aligned_cols=19 Identities=26% Similarity=0.482 Sum_probs=14.5
Q ss_pred eccCCCCccccCCceeecc
Q 047961 259 SGKLNQWCSQCELGFCFRP 277 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~~ 277 (280)
+|.....|++|++.|-.++
T Consensus 8 ~~~k~~~C~~C~k~F~~~~ 26 (46)
T 2en9_A 8 AGKKLFKCNECKKTFTQSS 26 (46)
T ss_dssp CSSCCCBCTTTCCBCSSHH
T ss_pred CCCCCEECCccCcccCCHH
Confidence 4566688999999996543
No 89
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=40.52 E-value=8.4 Score=20.50 Aligned_cols=14 Identities=21% Similarity=0.408 Sum_probs=11.1
Q ss_pred CCccccCCceeecc
Q 047961 264 QWCSQCELGFCFRP 277 (280)
Q Consensus 264 ~~~~~~~~~~~~~~ 277 (280)
..|++|++.|..++
T Consensus 4 ~~C~~C~k~f~~~~ 17 (30)
T 2lvr_A 4 YVCIHCQRQFADPG 17 (30)
Confidence 56999999997654
No 90
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.86 E-value=16 Score=21.96 Aligned_cols=19 Identities=32% Similarity=0.662 Sum_probs=14.7
Q ss_pred eccCCCCccccCCceeecc
Q 047961 259 SGKLNQWCSQCELGFCFRP 277 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~~ 277 (280)
+|.....|++|++.|-.++
T Consensus 8 ~~~~~~~C~~C~k~f~~~~ 26 (46)
T 2eoq_A 8 TGEKPFKCDICGKSFCGRS 26 (46)
T ss_dssp SSSCSCCCSSSCCCCSSHH
T ss_pred CCCCCcCCCcCCchhCCHH
Confidence 4566789999999996543
No 91
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.72 E-value=16 Score=22.05 Aligned_cols=19 Identities=26% Similarity=0.564 Sum_probs=14.6
Q ss_pred eccCCCCccccCCceeecc
Q 047961 259 SGKLNQWCSQCELGFCFRP 277 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~~ 277 (280)
+|.....|++|++.|-.++
T Consensus 8 ~~~k~~~C~~C~k~f~~~~ 26 (46)
T 2ytq_A 8 AGEKPYGCSECGKAFSSKS 26 (46)
T ss_dssp SCCCSCBCSSSCCBCSCHH
T ss_pred CCCCCcCCCccChhhCChH
Confidence 4566689999999997543
No 92
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.66 E-value=11 Score=22.36 Aligned_cols=19 Identities=21% Similarity=0.564 Sum_probs=14.4
Q ss_pred eccCCCCccccCCceeecc
Q 047961 259 SGKLNQWCSQCELGFCFRP 277 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~~ 277 (280)
+|.....|++|++.|-.++
T Consensus 8 ~~~k~~~C~~C~k~f~~~~ 26 (44)
T 2eof_A 8 TGEKPYECNECQKAFNTKS 26 (44)
T ss_dssp SCCCSEECTTTCCEESCHH
T ss_pred CCCCCeECCCCCcccCCHh
Confidence 4566688999999996543
No 93
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.59 E-value=11 Score=22.70 Aligned_cols=19 Identities=26% Similarity=0.583 Sum_probs=14.3
Q ss_pred eccCCCCccccCCceeecc
Q 047961 259 SGKLNQWCSQCELGFCFRP 277 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~~ 277 (280)
+|.....|++|++.|-.++
T Consensus 8 ~~~~~~~C~~C~k~F~~~~ 26 (46)
T 2emi_A 8 TGERHYECSECGKAFIQKS 26 (46)
T ss_dssp SSCCCEECSSSCCEESSHH
T ss_pred CCCCCCCCCCCCcccCCHH
Confidence 4556678999999996543
No 94
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=33.58 E-value=8.9 Score=23.99 Aligned_cols=19 Identities=21% Similarity=0.368 Sum_probs=14.2
Q ss_pred eccCCCCccccCCceeecc
Q 047961 259 SGKLNQWCSQCELGFCFRP 277 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~~ 277 (280)
+|.....|.+|++.|..+.
T Consensus 3 t~~kp~~C~~C~k~F~~~~ 21 (48)
T 3iuf_A 3 DRDKPYACDICGKRYKNRP 21 (48)
T ss_dssp TTTSCEECTTTCCEESSHH
T ss_pred CCCcCEECCCcCcccCCHH
Confidence 3555678999999997553
No 95
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.57 E-value=16 Score=21.94 Aligned_cols=18 Identities=22% Similarity=0.530 Sum_probs=14.2
Q ss_pred eccCCCCccccCCceeec
Q 047961 259 SGKLNQWCSQCELGFCFR 276 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~ 276 (280)
+|.....|++|++.|-.+
T Consensus 8 ~~~k~~~C~~C~k~f~~~ 25 (46)
T 2ytr_A 8 TGEKPYKCNECGKAFSQT 25 (46)
T ss_dssp SSCCTTCCTTTCCCCSSH
T ss_pred CCCcCcCCCCCCCccCCH
Confidence 466678999999999654
No 96
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=33.50 E-value=16 Score=22.02 Aligned_cols=19 Identities=21% Similarity=0.476 Sum_probs=14.8
Q ss_pred eccCCCCccccCCceeecc
Q 047961 259 SGKLNQWCSQCELGFCFRP 277 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~~ 277 (280)
+|.....|++|++.|-.++
T Consensus 8 ~~~k~~~C~~C~k~F~~~~ 26 (46)
T 2emk_A 8 TGEKPYECKECGKAFSQTT 26 (46)
T ss_dssp SSSCSCBCSSSCCBCSCHH
T ss_pred CCCCceECCCCCchhCCHH
Confidence 4666789999999996543
No 97
>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*
Probab=33.47 E-value=10 Score=24.06 Aligned_cols=18 Identities=11% Similarity=0.112 Sum_probs=13.9
Q ss_pred eccCCCCccccCCceeec
Q 047961 259 SGKLNQWCSQCELGFCFR 276 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~ 276 (280)
+|.....|++|++.|-.+
T Consensus 20 ~~~k~~~C~~C~k~f~~~ 37 (54)
T 1yui_A 20 QSEQPATCPICYAVIRQS 37 (54)
T ss_dssp TSSCCEECTTTCCEESSH
T ss_pred CCCCCccCCCCCcccCCH
Confidence 355668899999999654
No 98
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=33.36 E-value=1.4e+02 Score=25.81 Aligned_cols=122 Identities=8% Similarity=-0.004 Sum_probs=66.5
Q ss_pred HHHHhHHHHHHHHHHHHhhcCcceeeecC-CCCC---ChhHHHHHHHHHHhh--cCcce--EEEEEecccC-C-CCCCCC
Q 047961 102 ILRMDSETTLKQEISWASHLSLQACLLPS-PKGA---SCANYARCVNQILQS--LNNMQ--LWLRIPLVKN-D-DDTMDF 171 (280)
Q Consensus 102 ~ir~~S~~~L~~El~yA~~lgl~aviip~-P~~~---~~~~yAr~i~~~l~~--~~~~~--iwI~lP~~~~-~-~~~~~~ 171 (280)
..|..+.+.+++.+++|.-+|.+.|+++. |... ....+++.++++... ...++ +-++---..- . ....+.
T Consensus 101 ~~~~~~~~~~~~~i~~A~~lG~~~v~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~~~l~~En~~~e~~~~~t~~~~ 180 (303)
T 3l23_A 101 EVTPKIMEYWKATAADHAKLGCKYLIQPMMPTITTHDEAKLVCDIFNQASDVIKAEGIATGFGYHNHNMEFNRVATKEQQ 180 (303)
T ss_dssp TTHHHHHHHHHHHHHHHHHTTCSEEEECSCCCCCSHHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCSGGGSEECCTTTC
T ss_pred hhHHHHHHHHHHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcceEEEccCcceeecccccccc
Confidence 34678899999999999999999999974 2222 234456666666532 23455 5554210000 0 000000
Q ss_pred C--------C-CCChHHHHHHHHHHhcCCCccEEEEEccC----CCCChhhhhhhcccCceEEEEeC
Q 047961 172 I--------P-SGDSWELWNSFRLLCEHHSQLSVALDVLS----SLPSANSLGRWLGEPVRAAIIHT 225 (280)
Q Consensus 172 ~--------~-~~~~W~~Wn~iR~lc~y~~~L~VaL~l~~----~lP~~~~~~RWl~EPV~~lii~t 225 (280)
. . ..+.=+.+..+....+ .+++++.|++.. .-...+.+++ +++=|.++-+.-
T Consensus 181 ~~~g~~~~~~~~~~~~~~~~~l~~~~~-~~~v~~~~D~~h~~~~g~d~~~~i~~-~~~ri~~vH~kD 245 (303)
T 3l23_A 181 EKVKGNPFAAFMKVGDQIYDLMLKDTD-PSKVYFEMDVYWTVMGQNDPVEYMQK-HPDRIKVLHIKD 245 (303)
T ss_dssp ----------CCCCSEEHHHHHHHHSC-TTTEEEEEEHHHHHHTTCCHHHHHHH-CTTTEEEEEECC
T ss_pred cccccccccccccCchHHHHHHHHhCC-chhEEEEEehHHHHHcCCCHHHHHHH-hcCcEEEEEecC
Confidence 0 0 0001123444444443 467999999873 2222344444 356788888876
No 99
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.26 E-value=16 Score=21.97 Aligned_cols=18 Identities=28% Similarity=0.495 Sum_probs=14.4
Q ss_pred eccCCCCccccCCceeec
Q 047961 259 SGKLNQWCSQCELGFCFR 276 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~ 276 (280)
+|.....|++|++.|-.+
T Consensus 8 ~~~k~~~C~~C~k~F~~~ 25 (46)
T 2ytn_A 8 TGKKPYKCNECGKVFTQN 25 (46)
T ss_dssp SCCSSCBCTTTCCBCSSH
T ss_pred CCCcCeECCCCCCeeCCH
Confidence 466678999999999654
No 100
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.07 E-value=17 Score=21.83 Aligned_cols=19 Identities=26% Similarity=0.702 Sum_probs=14.7
Q ss_pred eccCCCCccccCCceeecc
Q 047961 259 SGKLNQWCSQCELGFCFRP 277 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~~ 277 (280)
+|.....|++|++.|-.+.
T Consensus 8 ~~~~~~~C~~C~k~f~~~~ 26 (46)
T 2eop_A 8 TGEKPHECRECGKSFSFNS 26 (46)
T ss_dssp CCCCSCBCTTTCCBCSSHH
T ss_pred CCCCCeeCCCCCchhCCHH
Confidence 4666789999999996543
No 101
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.05 E-value=17 Score=21.79 Aligned_cols=18 Identities=28% Similarity=0.490 Sum_probs=14.0
Q ss_pred eccCCCCccccCCceeec
Q 047961 259 SGKLNQWCSQCELGFCFR 276 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~ 276 (280)
+|.....|++|++.|-.+
T Consensus 8 ~~~k~~~C~~C~k~F~~~ 25 (47)
T 2epx_A 8 TGKKPYECIECGKAFIQN 25 (47)
T ss_dssp CCCCSBCCSSSCCCBSSH
T ss_pred CCCCCEECCccCchhCCh
Confidence 456668999999999654
No 102
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=32.64 E-value=13 Score=22.53 Aligned_cols=18 Identities=22% Similarity=0.567 Sum_probs=14.0
Q ss_pred eccCCCCccccCCceeec
Q 047961 259 SGKLNQWCSQCELGFCFR 276 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~ 276 (280)
+|.....|++|++.|-.+
T Consensus 8 ~~~k~~~C~~C~k~F~~~ 25 (46)
T 2emj_A 8 TGEKPFECAECGKSFSIS 25 (46)
T ss_dssp CCCCSEECSSSSCEESSH
T ss_pred CCCCCEECCCCCcccCCH
Confidence 456667899999999654
No 103
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.60 E-value=13 Score=22.41 Aligned_cols=19 Identities=21% Similarity=0.567 Sum_probs=14.5
Q ss_pred eccCCCCccccCCceeecc
Q 047961 259 SGKLNQWCSQCELGFCFRP 277 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~~ 277 (280)
+|.....|++|++.|-.++
T Consensus 8 ~~~k~~~C~~C~k~f~~~~ 26 (46)
T 2yts_A 8 TGEKPYICNECGKSFIQKS 26 (46)
T ss_dssp CSCCSEECSSSCCEESSHH
T ss_pred CCCcCEECCCCChhhCChH
Confidence 4566678999999997543
No 104
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.57 E-value=12 Score=22.47 Aligned_cols=19 Identities=26% Similarity=0.560 Sum_probs=14.5
Q ss_pred eccCCCCccccCCceeecc
Q 047961 259 SGKLNQWCSQCELGFCFRP 277 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~~ 277 (280)
+|.....|++|++.|-.++
T Consensus 8 ~~~k~~~C~~C~k~f~~~~ 26 (46)
T 2eow_A 8 TGEKPYKCNECGKAFRARS 26 (46)
T ss_dssp CCCCCEECTTSCCEESSHH
T ss_pred CCCCCeeccccCChhcCHH
Confidence 4566688999999997543
No 105
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=32.55 E-value=18 Score=21.82 Aligned_cols=19 Identities=32% Similarity=0.643 Sum_probs=14.7
Q ss_pred eccCCCCccccCCceeecc
Q 047961 259 SGKLNQWCSQCELGFCFRP 277 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~~ 277 (280)
+|.....|++|++.|-.+.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~ 26 (46)
T 2ely_A 8 TGEKPFKCVECGKGFSRRS 26 (46)
T ss_dssp CCCCSBCCSSSCCCBSSTT
T ss_pred CCCCCcccCccCcccCCHH
Confidence 4566789999999997543
No 106
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.54 E-value=17 Score=21.77 Aligned_cols=18 Identities=28% Similarity=0.695 Sum_probs=14.1
Q ss_pred eccCCCCccccCCceeec
Q 047961 259 SGKLNQWCSQCELGFCFR 276 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~ 276 (280)
+|.....|++|++.|-.+
T Consensus 8 ~~~~~~~C~~C~k~f~~~ 25 (46)
T 2eov_A 8 TGEKPYKCSDCGKSFTWK 25 (46)
T ss_dssp SSCCSCBCSSSCCBCSSH
T ss_pred CCCCCccCCccChhhCCH
Confidence 456668899999999654
No 107
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.48 E-value=17 Score=21.80 Aligned_cols=18 Identities=22% Similarity=0.398 Sum_probs=14.1
Q ss_pred eccCCCCccccCCceeec
Q 047961 259 SGKLNQWCSQCELGFCFR 276 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~ 276 (280)
+|.....|++|++.|-.+
T Consensus 8 ~~~k~~~C~~C~k~f~~~ 25 (46)
T 2epz_A 8 TGEKPFDCIDCGKAFSDH 25 (46)
T ss_dssp CCCCSBCCTTTCCCBSSH
T ss_pred CCCCCeECCCCCceeCCH
Confidence 455668999999999654
No 108
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.43 E-value=16 Score=21.86 Aligned_cols=19 Identities=26% Similarity=0.564 Sum_probs=14.5
Q ss_pred eccCCCCccccCCceeecc
Q 047961 259 SGKLNQWCSQCELGFCFRP 277 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~~ 277 (280)
+|.....|++|++.|-.++
T Consensus 8 ~~~k~~~C~~C~k~f~~~~ 26 (46)
T 2eq4_A 8 TGEKLYNCKECGKSFSRAP 26 (46)
T ss_dssp SCCCCCCBTTTTBCCSCHH
T ss_pred CCCCCeECCCCCCccCchH
Confidence 4566689999999996543
No 109
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=32.39 E-value=18 Score=21.73 Aligned_cols=19 Identities=21% Similarity=0.543 Sum_probs=14.6
Q ss_pred eccCCCCccccCCceeecc
Q 047961 259 SGKLNQWCSQCELGFCFRP 277 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~~ 277 (280)
+|.....|++|++.|-.++
T Consensus 8 ~~~k~~~C~~C~k~F~~~~ 26 (46)
T 2em0_A 8 MGEKTWKCRECDMCFSQAS 26 (46)
T ss_dssp CCCCCCCCSSSCCCCSSHH
T ss_pred CCCcCeECCCCCcccCCHH
Confidence 4566689999999996543
No 110
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.07 E-value=13 Score=22.50 Aligned_cols=18 Identities=28% Similarity=0.626 Sum_probs=13.7
Q ss_pred eccCCCCccccCCceeec
Q 047961 259 SGKLNQWCSQCELGFCFR 276 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~ 276 (280)
+|.....|++|++.|-.+
T Consensus 8 ~~~k~~~C~~C~k~F~~~ 25 (46)
T 2ytp_A 8 TGERHYECSECGKAFARK 25 (46)
T ss_dssp CCCCCEECSSSCCEESSH
T ss_pred CCCCCeECCcCCcccCCH
Confidence 355667899999999654
No 111
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=32.06 E-value=13 Score=22.21 Aligned_cols=18 Identities=33% Similarity=0.582 Sum_probs=13.9
Q ss_pred eccCCCCccccCCceeec
Q 047961 259 SGKLNQWCSQCELGFCFR 276 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~ 276 (280)
+|.....|++|++.|-.+
T Consensus 8 ~~~k~~~C~~C~k~f~~~ 25 (44)
T 2yu5_A 8 AGENPFKCSKCDRVFTQR 25 (44)
T ss_dssp SCCCSEECSSSSCEESSS
T ss_pred CCCCCeECCCCCchhCCH
Confidence 455667899999999654
No 112
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.92 E-value=13 Score=22.32 Aligned_cols=18 Identities=28% Similarity=0.595 Sum_probs=13.9
Q ss_pred eccCCCCccccCCceeec
Q 047961 259 SGKLNQWCSQCELGFCFR 276 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~ 276 (280)
+|.....|++|++.|-.+
T Consensus 8 ~~~k~~~C~~C~k~f~~~ 25 (46)
T 2ytf_A 8 TGEKPFECSECQKAFNTK 25 (46)
T ss_dssp CCCCSEECSSSCCEESSH
T ss_pred CCCCCcCCCCCCcccCCH
Confidence 455667899999999654
No 113
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.55 E-value=11 Score=22.39 Aligned_cols=19 Identities=21% Similarity=0.420 Sum_probs=14.4
Q ss_pred eccCCCCccccCCceeecc
Q 047961 259 SGKLNQWCSQCELGFCFRP 277 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~~ 277 (280)
+|.....|++|++.|-.++
T Consensus 8 ~~~k~~~C~~C~k~f~~~~ 26 (44)
T 2eoj_A 8 TGENPYECCECGKVFSRKD 26 (44)
T ss_dssp SSCCSCEETTTTEECSSHH
T ss_pred CCCcCeeCCCCCCccCCHH
Confidence 4556688999999997543
No 114
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=31.48 E-value=14 Score=22.37 Aligned_cols=19 Identities=21% Similarity=0.459 Sum_probs=14.4
Q ss_pred eccCCCCccccCCceeecc
Q 047961 259 SGKLNQWCSQCELGFCFRP 277 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~~ 277 (280)
+|.....|++|++.|-.++
T Consensus 8 ~~~k~~~C~~C~k~f~~~~ 26 (46)
T 2em4_A 8 TGQRPYECIECGKAFKTKS 26 (46)
T ss_dssp CCSSSEECSSSCCEESSHH
T ss_pred CCCcCcCCCCCCCccCCHH
Confidence 4566688999999996543
No 115
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=31.47 E-value=13 Score=22.12 Aligned_cols=19 Identities=26% Similarity=0.545 Sum_probs=14.2
Q ss_pred eccCCCCccccCCceeecc
Q 047961 259 SGKLNQWCSQCELGFCFRP 277 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~~ 277 (280)
+|.....|++|++.|-.++
T Consensus 8 ~~~k~~~C~~C~k~f~~~~ 26 (44)
T 2emb_A 8 HTRKRYECSKCQATFNLRK 26 (44)
T ss_dssp CCCSSEECTTTCCEESCHH
T ss_pred CCCCCeECCCCCCccCCHH
Confidence 4555678999999997543
No 116
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.35 E-value=19 Score=21.65 Aligned_cols=19 Identities=26% Similarity=0.391 Sum_probs=14.8
Q ss_pred eccCCCCccccCCceeecc
Q 047961 259 SGKLNQWCSQCELGFCFRP 277 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~~ 277 (280)
+|.....|++|++.|-.+.
T Consensus 8 ~~~k~~~C~~C~k~F~~~~ 26 (46)
T 2elz_A 8 SVEKPYKCEDCGKGYNRRL 26 (46)
T ss_dssp CCCSSCBCSSSCCBCSSHH
T ss_pred CCCCCeeCcccCchhCCHH
Confidence 4666789999999996543
No 117
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.04 E-value=14 Score=22.23 Aligned_cols=18 Identities=22% Similarity=0.617 Sum_probs=14.0
Q ss_pred eccCCCCccccCCceeec
Q 047961 259 SGKLNQWCSQCELGFCFR 276 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~ 276 (280)
+|.....|++|++.|-.+
T Consensus 8 ~~~~~~~C~~C~k~f~~~ 25 (46)
T 2yrj_A 8 TGEKPYRCGECGKAFAQK 25 (46)
T ss_dssp CCCCCEECSSSCCEESSH
T ss_pred CCCCCeECCCCCCccCCH
Confidence 456668899999999654
No 118
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=31.04 E-value=14 Score=22.36 Aligned_cols=18 Identities=22% Similarity=0.412 Sum_probs=13.7
Q ss_pred eccCCCCccccCCceeec
Q 047961 259 SGKLNQWCSQCELGFCFR 276 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~ 276 (280)
+|.....|++|++.|-.+
T Consensus 8 ~~~k~~~C~~C~k~f~~~ 25 (46)
T 2eoy_A 8 QKEKCFKCNKCEKTFSCS 25 (46)
T ss_dssp CCSCCEECSSSCCEESSS
T ss_pred CCCCCEECcCCCCcCCCH
Confidence 355567899999999654
No 119
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.92 E-value=12 Score=22.46 Aligned_cols=18 Identities=33% Similarity=0.674 Sum_probs=14.1
Q ss_pred eccCCCCccccCCceeec
Q 047961 259 SGKLNQWCSQCELGFCFR 276 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~ 276 (280)
+|.....|++|++.|-.+
T Consensus 8 ~~~k~~~C~~C~k~f~~~ 25 (46)
T 2eq3_A 8 TGEKPYECNQCGKAFSVR 25 (46)
T ss_dssp CCCCSSEETTTTEECSSH
T ss_pred CCCCCeECCCCChhhCCH
Confidence 456668899999999654
No 120
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.65 E-value=14 Score=22.16 Aligned_cols=18 Identities=28% Similarity=0.907 Sum_probs=14.0
Q ss_pred eccCCCCccccCCceeec
Q 047961 259 SGKLNQWCSQCELGFCFR 276 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~ 276 (280)
+|.....|++|++.|-.+
T Consensus 8 ~~~k~~~C~~C~k~F~~~ 25 (46)
T 2epw_A 8 TGEKPCKCTECGKAFCWK 25 (46)
T ss_dssp CCCCSEECSSSCCEESSS
T ss_pred CCCCCeeCCCCCCccCCH
Confidence 456668899999999654
No 121
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.28 E-value=19 Score=21.71 Aligned_cols=18 Identities=22% Similarity=0.423 Sum_probs=14.1
Q ss_pred eccCCCCccccCCceeec
Q 047961 259 SGKLNQWCSQCELGFCFR 276 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~ 276 (280)
+|.....|++|++.|-.+
T Consensus 8 ~~~k~~~C~~C~k~f~~~ 25 (46)
T 2ytm_A 8 TGEKPYKCMECGKAFGDN 25 (46)
T ss_dssp SSCCSSSBTTTTBCCSSH
T ss_pred CCCCCcCCCCCCchhCCH
Confidence 456668999999999654
No 122
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.23 E-value=14 Score=21.99 Aligned_cols=19 Identities=37% Similarity=0.572 Sum_probs=14.1
Q ss_pred eccCCCCccccCCceeecc
Q 047961 259 SGKLNQWCSQCELGFCFRP 277 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~~ 277 (280)
+|.....|++|+++|-.++
T Consensus 6 ~~~k~~~C~~C~k~f~~~~ 24 (44)
T 2emx_A 6 SGEKPFGCSCCEKAFSSKS 24 (44)
T ss_dssp SSCCCEECSSSSCEESSHH
T ss_pred CCCcCccCCCCCcccCCHH
Confidence 4555678999999996543
No 123
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.20 E-value=15 Score=22.16 Aligned_cols=18 Identities=22% Similarity=0.717 Sum_probs=13.8
Q ss_pred eccCCCCccccCCceeec
Q 047961 259 SGKLNQWCSQCELGFCFR 276 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~ 276 (280)
+|.....|++|++.|-.+
T Consensus 8 ~~~k~~~C~~C~k~F~~~ 25 (46)
T 2en3_A 8 TGEKPFQCKECGMNFSWS 25 (46)
T ss_dssp CCCCSEECSSSCCEESSS
T ss_pred CCCCCeeCcccChhhCCH
Confidence 355667899999999654
No 124
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=30.07 E-value=15 Score=22.05 Aligned_cols=19 Identities=32% Similarity=0.607 Sum_probs=14.4
Q ss_pred eccCCCCccccCCceeecc
Q 047961 259 SGKLNQWCSQCELGFCFRP 277 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~~ 277 (280)
+|.....|++|++.|-.++
T Consensus 8 ~~~k~~~C~~C~k~f~~~~ 26 (46)
T 2el4_A 8 TGVKPYGCSQCAKTFSLKS 26 (46)
T ss_dssp CCCCSEECSSSSCEESSHH
T ss_pred CCCCceECCCCCchhCCHH
Confidence 4556678999999996543
No 125
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.98 E-value=15 Score=22.11 Aligned_cols=19 Identities=21% Similarity=0.442 Sum_probs=14.6
Q ss_pred eccCCCCccccCCceeecc
Q 047961 259 SGKLNQWCSQCELGFCFRP 277 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~~ 277 (280)
+|.....|++|++.|-.++
T Consensus 8 ~~~k~~~C~~C~k~f~~~~ 26 (46)
T 2yu8_A 8 TGEKPYKCNECGKVFTQNS 26 (46)
T ss_dssp CCCSSEECSSSCCEESSSH
T ss_pred CCCCCeECCcCCchhCCHH
Confidence 4566688999999996543
No 126
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.89 E-value=14 Score=22.18 Aligned_cols=18 Identities=22% Similarity=0.538 Sum_probs=13.7
Q ss_pred eccCCCCccccCCceeec
Q 047961 259 SGKLNQWCSQCELGFCFR 276 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~ 276 (280)
+|.....|++|++.|-.+
T Consensus 8 ~~~~~~~C~~C~k~f~~~ 25 (46)
T 2eor_A 8 TGEKPYNCEECGKAFIHD 25 (46)
T ss_dssp SCCCSEECTTTCCEESSH
T ss_pred CCCcCccCCCCCCCcCCH
Confidence 355567899999999654
No 127
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.74 E-value=15 Score=22.17 Aligned_cols=19 Identities=21% Similarity=0.482 Sum_probs=14.3
Q ss_pred eccCCCCccccCCceeecc
Q 047961 259 SGKLNQWCSQCELGFCFRP 277 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~~ 277 (280)
+|.....|++|++.|-.+.
T Consensus 8 ~~~~~~~C~~C~k~F~~~~ 26 (46)
T 2em3_A 8 TGEKPYECKVCSKAFTQKA 26 (46)
T ss_dssp SSCCSEECSSSCCEESSHH
T ss_pred CCCcCeECCCCCcccCCHH
Confidence 4556678999999996543
No 128
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.71 E-value=15 Score=22.17 Aligned_cols=19 Identities=26% Similarity=0.588 Sum_probs=14.3
Q ss_pred eccCCCCccccCCceeecc
Q 047961 259 SGKLNQWCSQCELGFCFRP 277 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~~ 277 (280)
+|.....|++|++.|-.++
T Consensus 8 ~~~k~~~C~~C~k~f~~~~ 26 (46)
T 2ep3_A 8 TGEKPYRCAECGKAFTDRS 26 (46)
T ss_dssp SCCCSEECSSSCCEESSHH
T ss_pred CCCCCeECCCCCchhCCHH
Confidence 3556678999999996543
No 129
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=29.60 E-value=2.4e+02 Score=23.29 Aligned_cols=185 Identities=8% Similarity=-0.026 Sum_probs=95.8
Q ss_pred eeeecccC--CCCChHHHHHhhhccCCCcEEEeccCCCCCCCccccccCCCCCCCCCCCCCCcccCCCCCcceEEEEecC
Q 047961 15 RYCGVETD--FNDDMPHLLSFNLSSGGFDFVVASLMDPNYRPSLMEKDIGGGSHVLSFAGSDLVLSPSQWSSHVVGKISS 92 (280)
Q Consensus 15 ~~~G~~~~--~~~dl~~~l~~a~~~~gydfv~~PIt~~~~~~~~~~~d~~~~~~~~p~~~sD~~L~~~~w~s~vVg~~S~ 92 (280)
..+|+... ...++.+.++.+. +.|||.|=+....++...... .+ . ...-. .+... .=.+++.-..
T Consensus 7 m~lg~~~~~~~~~~~~~~l~~~~-~~G~~~vEl~~~~~~~~~~~~-~~--~-~~~~~------~~~~~--gl~~~~~~~~ 73 (272)
T 2q02_A 7 TRFCINRKIAPGLSIEAFFRLVK-RLEFNKVELRNDMPSGSVTDD-LN--Y-NQVRN------LAEKY--GLEIVTINAV 73 (272)
T ss_dssp GGEEEEGGGCTTSCHHHHHHHHH-HTTCCEEEEETTSTTSSTTTT-CC--H-HHHHH------HHHHT--TCEEEEEEEE
T ss_pred hhhhhcccccCCCCHHHHHHHHH-HcCCCEEEeeccccccccccc-cC--H-HHHHH------HHHHc--CCeEEechhh
Confidence 34677663 2347899999999 999999988754442111000 00 0 00000 00000 0011111111
Q ss_pred CCCCCCccHHHHHhHHHHHHHHHHHHhhcCcceeeec-CCCC-CChhHH-HHHHHHHHhhcCcceEEEEEecccCCCCCC
Q 047961 93 WIDLDSEDEILRMDSETTLKQEISWASHLSLQACLLP-SPKG-ASCANY-ARCVNQILQSLNNMQLWLRIPLVKNDDDTM 169 (280)
Q Consensus 93 WidlDS~d~~ir~~S~~~L~~El~yA~~lgl~aviip-~P~~-~~~~~y-Ar~i~~~l~~~~~~~iwI~lP~~~~~~~~~ 169 (280)
..+.++|+.. .+.+++-++.|.-+|.+.|++- ...+ ....++ ++.++++........+.|-+--......
T Consensus 74 -~~~~~~~~~~----~~~~~~~i~~a~~lG~~~v~~~~g~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~~E~~~~~~~-- 146 (272)
T 2q02_A 74 -YPFNQLTEEV----VKKTEGLLRDAQGVGARALVLCPLNDGTIVPPEVTVEAIKRLSDLFARYDIQGLVEPLGFRVS-- 146 (272)
T ss_dssp -TTTTSCCHHH----HHHHHHHHHHHHHHTCSEEEECCCCSSBCCCHHHHHHHHHHHHHHHHTTTCEEEECCCCSTTC--
T ss_pred -hccCCcHHHH----HHHHHHHHHHHHHhCCCEEEEccCCCchhHHHHHHHHHHHHHHHHHHHcCCEEEEEecCCCcc--
Confidence 1233345443 4678999999999999999874 3211 345666 7777777643322223333321110000
Q ss_pred CCCCCCChHHHHHHHHHHhcCCCccEEEEEccCCCC---Chhhhhhhc-ccCceEEEEeC
Q 047961 170 DFIPSGDSWELWNSFRLLCEHHSQLSVALDVLSSLP---SANSLGRWL-GEPVRAAIIHT 225 (280)
Q Consensus 170 ~~~~~~~~W~~Wn~iR~lc~y~~~L~VaL~l~~~lP---~~~~~~RWl-~EPV~~lii~t 225 (280)
...+..+....++. .+ +++++.+++..-.- ....+-..+ ++-|+.+-+.-
T Consensus 147 ---~~~~~~~~~~l~~~-v~--~~~g~~~D~~h~~~~~~~~~~~~~~l~~~~i~~vH~~D 200 (272)
T 2q02_A 147 ---SLRSAVWAQQLIRE-AG--SPFKVLLDTFHHHLYEEAEKEFASRIDISAIGLVHLSG 200 (272)
T ss_dssp ---SCCCHHHHHHHHHH-HT--CCCEEEEEHHHHHHCTTHHHHHHHHCCGGGEEEEEECB
T ss_pred ---cccCHHHHHHHHHH-hC--cCeEEEEEchHhhccCCCchhhhhhCCHhHEEEEEeCC
Confidence 02356666665554 44 79999999874322 121222333 67888888864
No 130
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.60 E-value=21 Score=21.49 Aligned_cols=18 Identities=28% Similarity=0.495 Sum_probs=14.1
Q ss_pred eccCCCCccccCCceeec
Q 047961 259 SGKLNQWCSQCELGFCFR 276 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~ 276 (280)
+|.....|++|++.|-.+
T Consensus 8 ~~~k~~~C~~C~k~f~~~ 25 (46)
T 2ytt_A 8 EGEKPYQCSECGKSFSGS 25 (46)
T ss_dssp SCCCTTCCSSSCCCCSSH
T ss_pred CCCCCeeCCCCCcccCCH
Confidence 456668999999999654
No 131
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.56 E-value=15 Score=22.15 Aligned_cols=18 Identities=28% Similarity=0.479 Sum_probs=13.9
Q ss_pred eccCCCCccccCCceeec
Q 047961 259 SGKLNQWCSQCELGFCFR 276 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~ 276 (280)
+|.....|++|++.|-.+
T Consensus 8 ~~~k~~~C~~C~k~f~~~ 25 (46)
T 2em2_A 8 SGEKPFKCKECGKAFRQN 25 (46)
T ss_dssp CCCCSEECSSSCCEESSH
T ss_pred CCCCCEECCcCCchhCCH
Confidence 456667899999999654
No 132
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.23 E-value=15 Score=22.13 Aligned_cols=19 Identities=26% Similarity=0.548 Sum_probs=14.3
Q ss_pred eccCCCCccccCCceeecc
Q 047961 259 SGKLNQWCSQCELGFCFRP 277 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~~ 277 (280)
+|.....|++|++.|-.++
T Consensus 8 ~~~k~~~C~~C~k~f~~~~ 26 (46)
T 2yto_A 8 TGEKPYKCSDCGKAFTRKS 26 (46)
T ss_dssp CSCCCEECSSSCCEESSHH
T ss_pred CCCCCEECcccCCccCCHh
Confidence 4556688999999997543
No 133
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.02 E-value=15 Score=22.08 Aligned_cols=19 Identities=26% Similarity=0.681 Sum_probs=14.4
Q ss_pred eccCCCCccccCCceeecc
Q 047961 259 SGKLNQWCSQCELGFCFRP 277 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~~ 277 (280)
+|.....|++|++.|-.++
T Consensus 8 ~~~k~~~C~~C~k~f~~~~ 26 (46)
T 2ytj_A 8 TGEKPYICAECGKAFTIRS 26 (46)
T ss_dssp SSCCSEECSSSCCEESSHH
T ss_pred CCCcCeECCCCChhhCCHH
Confidence 4556678999999996543
No 134
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=29.01 E-value=15 Score=26.73 Aligned_cols=17 Identities=18% Similarity=0.433 Sum_probs=12.5
Q ss_pred ccCCCCccccCCceeec
Q 047961 260 GKLNQWCSQCELGFCFR 276 (280)
Q Consensus 260 g~~~~~~~~~~~~~~~~ 276 (280)
+...|.|++|++.|-.+
T Consensus 25 ~~~~h~C~~Cgk~F~~~ 41 (85)
T 2lv2_A 25 SAECHLCPVCGESFASK 41 (85)
T ss_dssp CCTTEECTTSCCEESSH
T ss_pred CCCCEECCCCCCCcCcH
Confidence 34457899999988654
No 135
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.00 E-value=15 Score=22.16 Aligned_cols=19 Identities=26% Similarity=0.476 Sum_probs=14.6
Q ss_pred eccCCCCccccCCceeecc
Q 047961 259 SGKLNQWCSQCELGFCFRP 277 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~~ 277 (280)
+|.....|++|++.|-.++
T Consensus 8 ~~~k~~~C~~C~k~F~~~~ 26 (46)
T 2eoo_A 8 SGERPYGCNECGKNFGRHS 26 (46)
T ss_dssp SCCCCEECSSSCCEESSHH
T ss_pred CCCCCEEccccCcccCCHH
Confidence 4566688999999996543
No 136
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.57 E-value=16 Score=22.02 Aligned_cols=18 Identities=33% Similarity=0.617 Sum_probs=13.9
Q ss_pred eccCCCCccccCCceeec
Q 047961 259 SGKLNQWCSQCELGFCFR 276 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~ 276 (280)
+|.....|++|++.|-.+
T Consensus 8 ~~~k~~~C~~C~k~f~~~ 25 (46)
T 2eml_A 8 TGEKPYECSVCGKAFSHR 25 (46)
T ss_dssp SSCCSEECSSSCCEESSH
T ss_pred CCCCCeeCCCcCCccCCH
Confidence 456667899999999654
No 137
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.48 E-value=17 Score=21.90 Aligned_cols=19 Identities=21% Similarity=0.455 Sum_probs=14.3
Q ss_pred eccCCCCccccCCceeecc
Q 047961 259 SGKLNQWCSQCELGFCFRP 277 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~~ 277 (280)
+|.....|++|++.|-.++
T Consensus 8 ~~~k~~~C~~C~k~f~~~~ 26 (46)
T 2ene_A 8 TGEKPYKCNECGKVFRHNS 26 (46)
T ss_dssp CCSSSEECSSSCCEESSHH
T ss_pred CCCCCeECCCCCchhCChH
Confidence 4566678999999996543
No 138
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.47 E-value=16 Score=22.08 Aligned_cols=19 Identities=21% Similarity=0.517 Sum_probs=14.2
Q ss_pred eccCCCCccccCCceeecc
Q 047961 259 SGKLNQWCSQCELGFCFRP 277 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~~ 277 (280)
+|.....|++|++.|-.++
T Consensus 8 ~~~k~~~C~~C~k~F~~~~ 26 (46)
T 2emf_A 8 TGGKHFECTECGKAFTRKS 26 (46)
T ss_dssp SSSCCEECSSSCCEESCHH
T ss_pred CCCCCeECCCCCchhCCHH
Confidence 3556678999999996543
No 139
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.24 E-value=13 Score=22.25 Aligned_cols=19 Identities=16% Similarity=0.274 Sum_probs=14.2
Q ss_pred eccCCCCccccCCceeecc
Q 047961 259 SGKLNQWCSQCELGFCFRP 277 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~~ 277 (280)
+|.....|++|++.|-.+.
T Consensus 8 ~~~~~~~C~~C~k~F~~~~ 26 (44)
T 2eox_A 8 TDSKSYNCNECGKAFTRIF 26 (44)
T ss_dssp CCCCCEEETTTTEEESSSH
T ss_pred CCCCCeECcccCcccCCHH
Confidence 4556678999999996543
No 140
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.16 E-value=16 Score=21.95 Aligned_cols=19 Identities=26% Similarity=0.454 Sum_probs=14.3
Q ss_pred eccCCCCccccCCceeecc
Q 047961 259 SGKLNQWCSQCELGFCFRP 277 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~~ 277 (280)
+|.....|++|++.|-.++
T Consensus 8 ~~~~~~~C~~C~k~f~~~~ 26 (46)
T 2ytk_A 8 SGEKPYKCNECGKVFTQNS 26 (46)
T ss_dssp SSSCSEECSSSCCEESSHH
T ss_pred CCCCCEeCCcCCCccCCHH
Confidence 4566678999999996543
No 141
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.04 E-value=17 Score=21.87 Aligned_cols=19 Identities=32% Similarity=0.606 Sum_probs=14.3
Q ss_pred eccCCCCccccCCceeecc
Q 047961 259 SGKLNQWCSQCELGFCFRP 277 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~~ 277 (280)
+|.....|++|++.|-.++
T Consensus 8 ~~~k~~~C~~C~k~f~~~~ 26 (46)
T 2enc_A 8 SGEKPFKCEECGKGFYTNS 26 (46)
T ss_dssp CCCCSEECSSSCCEESSHH
T ss_pred CCCCCcCCCCCCCcCCChH
Confidence 4566688999999996543
No 142
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.03 E-value=17 Score=21.84 Aligned_cols=18 Identities=33% Similarity=0.933 Sum_probs=13.9
Q ss_pred eccCCCCccccCCceeec
Q 047961 259 SGKLNQWCSQCELGFCFR 276 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~ 276 (280)
+|.....|++|++.|-.+
T Consensus 8 ~~~~~~~C~~C~k~f~~~ 25 (46)
T 2en8_A 8 SGEKSHTCDECGKNFCYI 25 (46)
T ss_dssp CCCSSEECTTTCCEESSH
T ss_pred CCCCCeECCCcCcccCCH
Confidence 456667899999999654
No 143
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=28.02 E-value=15 Score=22.11 Aligned_cols=19 Identities=21% Similarity=0.462 Sum_probs=14.3
Q ss_pred eccCCCCccccCCceeecc
Q 047961 259 SGKLNQWCSQCELGFCFRP 277 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~~ 277 (280)
+|.....|++|++.|-.++
T Consensus 8 ~~~k~~~C~~C~k~f~~~~ 26 (46)
T 2ema_A 8 TGEKRYKCNECGKVFSRNS 26 (46)
T ss_dssp TTSCCEECSSSCCEESSHH
T ss_pred CCCcCcCCCCCcchhCCHH
Confidence 4556678999999996543
No 144
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=27.88 E-value=17 Score=21.78 Aligned_cols=18 Identities=22% Similarity=0.577 Sum_probs=13.8
Q ss_pred eccCCCCccccCCceeec
Q 047961 259 SGKLNQWCSQCELGFCFR 276 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~ 276 (280)
+|.....|++|++.|-.+
T Consensus 8 ~~~k~~~C~~C~k~f~~~ 25 (46)
T 2em9_A 8 TGEKPYNCKECGKSFRWA 25 (46)
T ss_dssp CCCCSEECSSSCCEESSH
T ss_pred CCCcCeECCccccccCCh
Confidence 455667899999999654
No 145
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.80 E-value=17 Score=21.90 Aligned_cols=18 Identities=33% Similarity=0.732 Sum_probs=13.7
Q ss_pred eccCCCCccccCCceeec
Q 047961 259 SGKLNQWCSQCELGFCFR 276 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~ 276 (280)
+|.....|++|++.|-.+
T Consensus 8 ~~~k~~~C~~C~k~f~~~ 25 (46)
T 2em7_A 8 TGEKPYKCEECGKGFICR 25 (46)
T ss_dssp SCCCSEECSSSCCEESCH
T ss_pred CCCcCccCCCccchhCCH
Confidence 355567899999999654
No 146
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.77 E-value=17 Score=21.85 Aligned_cols=19 Identities=21% Similarity=0.440 Sum_probs=14.3
Q ss_pred eccCCCCccccCCceeecc
Q 047961 259 SGKLNQWCSQCELGFCFRP 277 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~~ 277 (280)
+|.....|++|++.|-.++
T Consensus 8 ~~~k~~~C~~C~k~F~~~~ 26 (46)
T 2emy_A 8 TGENPYECHECGKAFSRKY 26 (46)
T ss_dssp CSSCCEECSSSCCEESSHH
T ss_pred CCCcCcCCCCCCcccCcHH
Confidence 4556678999999996543
No 147
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.70 E-value=17 Score=21.89 Aligned_cols=19 Identities=26% Similarity=0.482 Sum_probs=14.3
Q ss_pred eccCCCCccccCCceeecc
Q 047961 259 SGKLNQWCSQCELGFCFRP 277 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~~ 277 (280)
+|.....|++|++.|-.++
T Consensus 8 ~~~k~~~C~~C~k~f~~~~ 26 (46)
T 2ep2_A 8 TGEKPYECSICGKSFTKKS 26 (46)
T ss_dssp SCCCSEECSSSCCEESSHH
T ss_pred CCCcCcCCCCCCcccCCHH
Confidence 4556678999999996543
No 148
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=27.61 E-value=23 Score=22.32 Aligned_cols=16 Identities=13% Similarity=0.123 Sum_probs=13.0
Q ss_pred eccCCCCccccCCcee
Q 047961 259 SGKLNQWCSQCELGFC 274 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~ 274 (280)
.|.....|++|+++|.
T Consensus 37 ~~~k~~~C~~C~k~F~ 52 (54)
T 2eps_A 37 TSERPHKCQVWVSGPS 52 (54)
T ss_dssp CCCCCCCSSSSCCSSC
T ss_pred CCCCCccCCCCCCCCC
Confidence 3566789999999985
No 149
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.36 E-value=17 Score=21.90 Aligned_cols=19 Identities=26% Similarity=0.534 Sum_probs=14.5
Q ss_pred eccCCCCccccCCceeecc
Q 047961 259 SGKLNQWCSQCELGFCFRP 277 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~~ 277 (280)
+|.....|++|++.|-.++
T Consensus 8 ~~~k~~~C~~C~k~F~~~~ 26 (46)
T 2emh_A 8 TGERPYICTVCGKAFTDRS 26 (46)
T ss_dssp SCCCSEECTTTCCEESSHH
T ss_pred CCCCCcCCCCCCchhCCHH
Confidence 4566688999999996543
No 150
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.30 E-value=15 Score=22.07 Aligned_cols=19 Identities=21% Similarity=0.382 Sum_probs=14.3
Q ss_pred eccCCCCccccCCceeecc
Q 047961 259 SGKLNQWCSQCELGFCFRP 277 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~~ 277 (280)
+|.....|++|++.|-.++
T Consensus 8 ~~~k~~~C~~C~k~F~~~~ 26 (46)
T 2eq0_A 8 TGEKPYKCHECGKVFRRNS 26 (46)
T ss_dssp TCCCCEECTTTCCEESSHH
T ss_pred CCCCCeECCCCCchhCCHH
Confidence 3556678999999996543
No 151
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.03 E-value=17 Score=21.73 Aligned_cols=18 Identities=22% Similarity=0.558 Sum_probs=13.7
Q ss_pred eccCCCCccccCCceeec
Q 047961 259 SGKLNQWCSQCELGFCFR 276 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~ 276 (280)
+|.....|++|++.|-.+
T Consensus 8 ~~~k~~~C~~C~k~f~~~ 25 (46)
T 2emm_A 8 TGERPHKCNECGKSFIQS 25 (46)
T ss_dssp SCCCSEECSSSCCEESSH
T ss_pred CCCCCeeCCCCChhhCCH
Confidence 455667899999999654
No 152
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=26.99 E-value=18 Score=21.77 Aligned_cols=18 Identities=39% Similarity=0.580 Sum_probs=13.8
Q ss_pred eccCCCCccccCCceeec
Q 047961 259 SGKLNQWCSQCELGFCFR 276 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~ 276 (280)
+|.....|++|++.|-.+
T Consensus 8 ~~~k~~~C~~C~k~f~~~ 25 (46)
T 2el6_A 8 AGVNPYKCSQCEKSFSGK 25 (46)
T ss_dssp CCCCSEECSSSSCEESSH
T ss_pred CCCCCeECCCCCcccCCH
Confidence 355667899999999654
No 153
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.81 E-value=18 Score=21.76 Aligned_cols=18 Identities=28% Similarity=0.728 Sum_probs=13.9
Q ss_pred eccCCCCccccCCceeec
Q 047961 259 SGKLNQWCSQCELGFCFR 276 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~ 276 (280)
+|.....|++|++.|-.+
T Consensus 8 ~~~~~~~C~~C~k~f~~~ 25 (46)
T 2em5_A 8 SSTKSHQCHECGRGFTLK 25 (46)
T ss_dssp CCSCSEECSSSCCEESSH
T ss_pred CCCCCeECCcCCCccCCH
Confidence 455667899999999654
No 154
>2ct7_A Ring finger protein 31; IBR, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.4
Probab=26.78 E-value=17 Score=26.52 Aligned_cols=15 Identities=47% Similarity=1.072 Sum_probs=12.3
Q ss_pred CCCCccccCCceeec
Q 047961 262 LNQWCSQCELGFCFR 276 (280)
Q Consensus 262 ~~~~~~~~~~~~~~~ 276 (280)
..-.|+.|++.||++
T Consensus 42 ~~v~C~~C~~~FC~~ 56 (86)
T 2ct7_A 42 LEATCPQCHQTFCVR 56 (86)
T ss_dssp SCEECTTTCCEECSS
T ss_pred CceEeCCCCCccccc
Confidence 345799999999985
No 155
>3fxt_A Nucleoside diphosphate-linked moiety X motif 6; nudix, NUDT6, GFG, FGF2AS, antisense basic fibroblast growth FGF-2 regulation, hydrolase; 2.30A {Homo sapiens}
Probab=26.70 E-value=78 Score=24.72 Aligned_cols=41 Identities=17% Similarity=0.370 Sum_probs=28.4
Q ss_pred cceeeecC-----CCCCChhHHHHHHHHHHh---hcCcceEEEEEeccc
Q 047961 123 LQACLLPS-----PKGASCANYARCVNQILQ---SLNNMQLWLRIPLVK 163 (280)
Q Consensus 123 l~aviip~-----P~~~~~~~yAr~i~~~l~---~~~~~~iwI~lP~~~ 163 (280)
..+|+|.. |...+...|++.|++.+. ....-.|||+||+..
T Consensus 32 ygGV~Vd~~~l~~~~~~d~~~F~~~L~~SL~~Wr~~gk~~IWlklpi~~ 80 (113)
T 3fxt_A 32 FGGISVRLARLDALDRLDAAAFQKGLQAAVQQWRSEGRTAVWLHIPILQ 80 (113)
T ss_dssp TSCEEEEHHHHTTTSCBCHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGG
T ss_pred cCCEEEeCCccCCcCcCCHHHHHHHHHHHHHHHHHcCCeeEEEEcCHHH
Confidence 34556653 233477889999988774 445678999999864
No 156
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=26.57 E-value=15 Score=24.80 Aligned_cols=19 Identities=21% Similarity=0.350 Sum_probs=15.6
Q ss_pred eccCCCCccccCCceeecc
Q 047961 259 SGKLNQWCSQCELGFCFRP 277 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~~ 277 (280)
+|.....|++|+++|-.++
T Consensus 28 t~ekp~~C~~C~k~F~~~~ 46 (60)
T 4gzn_C 28 LGYRPRSCPECGKCFRDQS 46 (60)
T ss_dssp HTCCCEECTTTCCEESSHH
T ss_pred CCCcCeECCCCCCCcCCHH
Confidence 5777899999999997554
No 157
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.49 E-value=16 Score=21.86 Aligned_cols=18 Identities=22% Similarity=0.459 Sum_probs=14.2
Q ss_pred eccCCCCccccCCceeec
Q 047961 259 SGKLNQWCSQCELGFCFR 276 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~ 276 (280)
+|.....|++|++.|-.+
T Consensus 8 ~~~~~~~C~~C~k~F~~~ 25 (46)
T 2eoe_A 8 TGEKPYKCNECGKVFTQN 25 (46)
T ss_dssp CCCCSSEETTTTEECSSH
T ss_pred CCCCCeECCCcChhhCCH
Confidence 456678999999998654
No 158
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.46 E-value=18 Score=21.78 Aligned_cols=19 Identities=21% Similarity=0.464 Sum_probs=14.4
Q ss_pred eccCCCCccccCCceeecc
Q 047961 259 SGKLNQWCSQCELGFCFRP 277 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~~ 277 (280)
+|.....|++|++.|-.++
T Consensus 8 ~~~~~~~C~~C~k~f~~~~ 26 (46)
T 2ytg_A 8 TGEKPFKCGECGKSYNQRV 26 (46)
T ss_dssp SSCCSEECTTTCCEESSSH
T ss_pred CCCCCeECCCCCcccCCHH
Confidence 4566678999999996543
No 159
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.42 E-value=19 Score=21.71 Aligned_cols=18 Identities=33% Similarity=0.612 Sum_probs=14.0
Q ss_pred eccCCCCccccCCceeec
Q 047961 259 SGKLNQWCSQCELGFCFR 276 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~ 276 (280)
+|.....|++|++.|-.+
T Consensus 8 ~~~k~~~C~~C~k~f~~~ 25 (46)
T 2em8_A 8 SGEKPYKCVECGKGYKRR 25 (46)
T ss_dssp CSCCSEECSSSCCEESSH
T ss_pred CCCCCeECcccCchhCCH
Confidence 456667899999999654
No 160
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.40 E-value=19 Score=21.64 Aligned_cols=19 Identities=32% Similarity=0.518 Sum_probs=14.2
Q ss_pred eccCCCCccccCCceeecc
Q 047961 259 SGKLNQWCSQCELGFCFRP 277 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~~ 277 (280)
+|.....|++|++.|-.++
T Consensus 8 ~~~k~~~C~~C~k~f~~~~ 26 (46)
T 2ytd_A 8 SGEKPYKCSECGKAFHRHT 26 (46)
T ss_dssp CCCCSEECSSSCCEESSHH
T ss_pred CCCcCeECCCCCCeeCChH
Confidence 3556678999999996543
No 161
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.32 E-value=14 Score=22.15 Aligned_cols=18 Identities=22% Similarity=0.521 Sum_probs=13.4
Q ss_pred eccCCCCccccCCceeec
Q 047961 259 SGKLNQWCSQCELGFCFR 276 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~ 276 (280)
+|.....|++|++.|--+
T Consensus 8 ~~~k~~~C~~C~k~F~~~ 25 (45)
T 2epu_A 8 TGQKPFECTHCGKSFRAK 25 (45)
T ss_dssp CSCCSEEETTTTEEESSH
T ss_pred CCCcCccCCCCCCccCCh
Confidence 355567899999998654
No 162
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.27 E-value=14 Score=22.33 Aligned_cols=19 Identities=21% Similarity=0.534 Sum_probs=14.3
Q ss_pred eccCCCCccccCCceeecc
Q 047961 259 SGKLNQWCSQCELGFCFRP 277 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~~ 277 (280)
+|.....|++|++.|-.+.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~ 26 (46)
T 2eoz_A 8 TGEKPYSCNVCGKAFVLSA 26 (46)
T ss_dssp SSCCSEEETTTTEEESSHH
T ss_pred CCCCCeECcccChhhCCHH
Confidence 4556678999999997543
No 163
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.22 E-value=19 Score=21.55 Aligned_cols=18 Identities=28% Similarity=0.536 Sum_probs=13.7
Q ss_pred eccCCCCccccCCceeec
Q 047961 259 SGKLNQWCSQCELGFCFR 276 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~ 276 (280)
+|.....|++|++.|-.+
T Consensus 8 ~~~k~~~C~~C~k~f~~~ 25 (46)
T 2eme_A 8 SGEKPYVCDYCGKAFGLS 25 (46)
T ss_dssp CCCCSEECSSSCCEESSH
T ss_pred CCCCCeECCCCChhhCCH
Confidence 355567899999999654
No 164
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.12 E-value=19 Score=21.67 Aligned_cols=19 Identities=21% Similarity=0.522 Sum_probs=14.4
Q ss_pred eccCCCCccccCCceeecc
Q 047961 259 SGKLNQWCSQCELGFCFRP 277 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~~ 277 (280)
+|.....|++|++.|-.++
T Consensus 8 ~~~k~~~C~~C~k~f~~~~ 26 (46)
T 2emp_A 8 TGVKPYMCNECGKAFSVYS 26 (46)
T ss_dssp SCCCSEECSSSCCEESCHH
T ss_pred CCCcCeECCCCCchhCCHH
Confidence 4556678999999996543
No 165
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.38 E-value=19 Score=21.64 Aligned_cols=18 Identities=22% Similarity=0.333 Sum_probs=13.8
Q ss_pred eccCCCCccccCCceeec
Q 047961 259 SGKLNQWCSQCELGFCFR 276 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~ 276 (280)
+|.....|++|++.|-.+
T Consensus 8 ~~~~~~~C~~C~k~f~~~ 25 (46)
T 2yso_A 8 SREKSHQCRECGEIFFQY 25 (46)
T ss_dssp SCCCCEECTTTCCEESSH
T ss_pred CCCCCEEccccChhhCCH
Confidence 455667899999999654
No 166
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=25.30 E-value=17 Score=21.77 Aligned_cols=19 Identities=32% Similarity=0.511 Sum_probs=14.2
Q ss_pred eccCCCCccccCCceeecc
Q 047961 259 SGKLNQWCSQCELGFCFRP 277 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~~ 277 (280)
+|.....|++|++.|-.++
T Consensus 6 ~~~k~~~C~~C~k~f~~~~ 24 (45)
T 2epq_A 6 SGEKPYSCPVCGLRFKRKD 24 (45)
T ss_dssp SSCCSSEETTTTEECSCHH
T ss_pred CCCCCCcCCCCCcccCCHH
Confidence 4556688999999996543
No 167
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.08 E-value=16 Score=22.02 Aligned_cols=19 Identities=26% Similarity=0.466 Sum_probs=14.4
Q ss_pred eccCCCCccccCCceeecc
Q 047961 259 SGKLNQWCSQCELGFCFRP 277 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~~ 277 (280)
+|.....|++|++.|-.++
T Consensus 8 ~~~~~~~C~~C~k~f~~~~ 26 (46)
T 2en1_A 8 SGEKPFKCEECGKRFTQNS 26 (46)
T ss_dssp CCCCSEEETTTTEEESSHH
T ss_pred CCCCCeeCCCCCcccCCHH
Confidence 4566688999999996543
No 168
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.31 E-value=16 Score=21.93 Aligned_cols=18 Identities=28% Similarity=0.558 Sum_probs=13.9
Q ss_pred eccCCCCccccCCceeec
Q 047961 259 SGKLNQWCSQCELGFCFR 276 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~ 276 (280)
+|.....|++|++.|-.+
T Consensus 8 ~~~~~~~C~~C~k~f~~~ 25 (46)
T 2en6_A 8 SGEKPYGCNECGKTFSQK 25 (46)
T ss_dssp CSSCCEEETTTTEEESSH
T ss_pred CCCcCeECCCCCcccCch
Confidence 456668899999998644
No 169
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.85 E-value=17 Score=21.91 Aligned_cols=18 Identities=22% Similarity=0.606 Sum_probs=13.8
Q ss_pred eccCCCCccccCCceeec
Q 047961 259 SGKLNQWCSQCELGFCFR 276 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~ 276 (280)
+|.....|++|++.|-.+
T Consensus 8 ~~~k~~~C~~C~k~f~~~ 25 (46)
T 2ysp_A 8 TGEKPYKCEKCGKGYNSK 25 (46)
T ss_dssp SSCCSEEETTTTEEESCH
T ss_pred CCCCCeECCCCCCccCCH
Confidence 455667899999998654
No 170
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.09 E-value=21 Score=21.38 Aligned_cols=18 Identities=22% Similarity=0.569 Sum_probs=13.6
Q ss_pred eccCCCCccccCCceeec
Q 047961 259 SGKLNQWCSQCELGFCFR 276 (280)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~ 276 (280)
+|.....|++|++.|-.+
T Consensus 8 ~~~~~~~C~~C~k~f~~~ 25 (46)
T 2ep0_A 8 TGEKPYKCDVCHKSFRYG 25 (46)
T ss_dssp TTCCSEECSSSCCEESSH
T ss_pred CCCCCeeCcccCcccCCh
Confidence 355567899999999654
No 171
>2jmo_A Parkin; IBR, E3 ligase, zinc binding domain, RBR; NMR {Homo sapiens}
Probab=21.84 E-value=36 Score=24.55 Aligned_cols=17 Identities=24% Similarity=0.683 Sum_probs=13.6
Q ss_pred ccCCCCcc-----ccCCceeec
Q 047961 260 GKLNQWCS-----QCELGFCFR 276 (280)
Q Consensus 260 g~~~~~~~-----~~~~~~~~~ 276 (280)
+...-.|+ .|++.|||+
T Consensus 42 ~~~~v~C~~~~~~~C~~~FC~~ 63 (80)
T 2jmo_A 42 DQRKVTCEGGNGLGCGFAFCRE 63 (80)
T ss_dssp CTTSBCTTSSSTTCCSCCEETT
T ss_pred CCCcCCCCCCCCCCCCCeeccc
Confidence 44557788 899999986
No 172
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=21.64 E-value=22 Score=23.37 Aligned_cols=15 Identities=20% Similarity=0.492 Sum_probs=9.1
Q ss_pred ccCCCCccccCCcee
Q 047961 260 GKLNQWCSQCELGFC 274 (280)
Q Consensus 260 g~~~~~~~~~~~~~~ 274 (280)
|.....|++|++.|-
T Consensus 11 ~~k~~~C~~C~k~F~ 25 (62)
T 1vd4_A 11 NRASFKCPVCSSTFT 25 (62)
T ss_dssp SSSEEECSSSCCEEE
T ss_pred CCCCccCCCCCchhc
Confidence 444456777777664
No 173
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=21.22 E-value=30 Score=21.52 Aligned_cols=11 Identities=36% Similarity=0.528 Sum_probs=5.7
Q ss_pred CCccccCCcee
Q 047961 264 QWCSQCELGFC 274 (280)
Q Consensus 264 ~~~~~~~~~~~ 274 (280)
..|++|++.|-
T Consensus 5 ~~C~~C~~~f~ 15 (57)
T 3uk3_C 5 RECSYCGKFFR 15 (57)
T ss_dssp CBCTTTCCBCS
T ss_pred ccCCCCcchhC
Confidence 44555555553
Done!