BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047967
(81 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 35.8 bits (81), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
M + FK+ D+DGDG +S +L+ M TD++I+ MIR
Sbjct: 85 MREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIR 126
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
+ + F+V DKDG+G +S +L+ M TD++++ MIR
Sbjct: 385 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIR 426
Score = 28.5 bits (62), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 28/57 (49%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDGVSSPSF 80
++ F + DKDGDG ++ +L + M T+ +++ MI D + + P F
Sbjct: 312 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEF 368
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
+ + F+V DKDG+G +S +L+ M TD++++ MIR
Sbjct: 377 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIR 418
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 28/56 (50%)
Query: 25 EDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDGVSSPSF 80
++ F + DKDGDG ++ +L + M T+ +++ MI D + + P F
Sbjct: 305 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEF 360
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
+ + F+V DKDG+G +S +L+ M TD++++ MIR
Sbjct: 387 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIR 428
Score = 30.8 bits (68), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 28/57 (49%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDGVSSPSF 80
++ F + DKDGDG ++ +L + M T+ +++ MI D N + P F
Sbjct: 314 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 370
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
+ + F+V DKDG+G +S +L+ M TD++++ MIR
Sbjct: 385 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIR 426
Score = 28.5 bits (62), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 28/57 (49%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDGVSSPSF 80
++ F + DKDGDG ++ +L + M T+ +++ MI D + + P F
Sbjct: 312 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEF 368
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
+ + F+V DKDG+G +S +L+ M TD++++ MIR
Sbjct: 386 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIR 427
Score = 30.8 bits (68), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 28/57 (49%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDGVSSPSF 80
++ F + DKDGDG ++ +L + M T+ +++ MI D N + P F
Sbjct: 313 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 369
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
+ + F+V DKDG+G +S +L+ M TD++++ MIR
Sbjct: 386 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIR 427
Score = 30.8 bits (68), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 28/57 (49%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDGVSSPSF 80
++ F + DKDGDG ++ +L + M T+ +++ MI D N + P F
Sbjct: 313 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 369
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 35.0 bits (79), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
+ + F+V DKDG+G +S +L+ M TD++++ MIR
Sbjct: 386 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIR 427
Score = 30.8 bits (68), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 28/57 (49%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDGVSSPSF 80
++ F + DKDGDG ++ +L + M T+ +++ MI D N + P F
Sbjct: 313 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 369
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 35.0 bits (79), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%)
Query: 26 DVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
+ FKV D+DG+G +S +L+ M TDD+++ MIR
Sbjct: 87 EAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIR 126
Score = 30.0 bits (66), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 26 DVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDGVSSPSF 80
+ F + DKDGDG ++ +L + M T+ +++ MI D N + P F
Sbjct: 14 EAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 35.0 bits (79), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%)
Query: 26 DVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
+ FKV D+DG+G +S +L+ M TDD+++ MIR
Sbjct: 87 EAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIR 126
Score = 30.0 bits (66), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 26 DVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDGVSSPSF 80
+ F + DKDGDG ++ +L + M T+ +++ MI D N + P F
Sbjct: 14 EAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 35.0 bits (79), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
+ + F+V DKDG+G +S +L+ M TD++++ MIR
Sbjct: 385 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIR 426
Score = 28.5 bits (62), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 28/57 (49%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDGVSSPSF 80
++ F + DKDGDG ++ +L + M T+ +++ MI D + + P F
Sbjct: 312 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEF 368
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 35.0 bits (79), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
+ + F+V DKDG+G +S +L+ M TD++++ MIR
Sbjct: 386 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIR 427
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 28/57 (49%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDGVSSPSF 80
++ F + DKDGDG ++ +L + M T+ +++ MI D + + P F
Sbjct: 313 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEF 369
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 35.0 bits (79), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
+ + F+V DKDG+G +S +L+ M TD++++ MIR
Sbjct: 386 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIR 427
Score = 30.8 bits (68), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 28/57 (49%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDGVSSPSF 80
++ F + DKDGDG ++ +L + M T+ +++ MI D N + P F
Sbjct: 313 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 369
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 35.0 bits (79), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
+ + F+V DKDG+G +S +L+ M TD++++ MIR
Sbjct: 349 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIR 390
Score = 30.8 bits (68), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Query: 18 NGKDGLMED-------VFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGD 70
N +D L E+ F + DKDGDG ++ +L + M T+ +++ MI D
Sbjct: 263 NTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD 322
Query: 71 ENDGVSSPSF 80
N + P F
Sbjct: 323 GNGTIDFPEF 332
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 35.0 bits (79), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
+ + F+V DKDG+G +S +L+ M TD++++ MIR
Sbjct: 352 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIR 393
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Query: 18 NGKDGLMED-------VFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGD 70
N +D L E+ F + DKDGDG ++ +L + M T+ +++ MI D
Sbjct: 266 NSRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD 325
Query: 71 ENDGVSSPSF 80
N + P F
Sbjct: 326 GNGTIDFPEF 335
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 35.0 bits (79), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
+ + F+V DKDG+G +S +L+ M TD++++ MIR
Sbjct: 352 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIR 393
Score = 30.8 bits (68), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Query: 18 NGKDGLMED-------VFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGD 70
N +D L E+ F + DKDGDG ++ +L + M T+ +++ MI D
Sbjct: 266 NTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD 325
Query: 71 ENDGVSSPSF 80
N + P F
Sbjct: 326 GNGTIDFPEF 335
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 34.7 bits (78), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
+ + F+V DKDG+G +S DL+ M TD++++ MIR
Sbjct: 9 IREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIR 50
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin
Bound To The Iq Motif Of Nav1.2
Length = 73
Score = 34.7 bits (78), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%)
Query: 26 DVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
+ FKV D+DG+G +S +L+ M TDD+++ MIR
Sbjct: 12 EAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIR 51
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 34.7 bits (78), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 31/57 (54%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDGVSSPSF 80
+ + F+V DKDG+G +S +L+ M TD++++ MIR D + V+ F
Sbjct: 85 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDGQVNYEEF 141
Score = 30.0 bits (66), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 26 DVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDGVSSPSF 80
+ F + DKDGDG ++ +L + M T+ +++ MI D N + P F
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 34.7 bits (78), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 31/57 (54%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDGVSSPSF 80
+ + F+V DKDG+G +S +L+ M TD++++ MIR D + V+ F
Sbjct: 80 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDGQVNYEEF 136
Score = 30.0 bits (66), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 26 DVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDGVSSPSF 80
+ F + DKDGDG ++ +L + M T+ +++ MI D N + P F
Sbjct: 10 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 64
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 34.3 bits (77), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDGVSSPSF 80
+ + F+V KDG+G +S L+ M TD++++ MIR G D + V+ F
Sbjct: 386 IREAFRVFGKDGNGYISAAQLRHVMTNLGEKLTDEEVDEMIREAGIDGDGQVNYEQF 442
Score = 32.7 bits (73), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 28/57 (49%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDGVSSPSF 80
++ F + DKDGDG ++ L + M T+ +++ MI G D N + P F
Sbjct: 313 FKEAFSLFDKDGDGGITTKQLGTVMRSLGQNPTEAELQDMINEVGADGNGTIDFPQF 369
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 34.3 bits (77), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDG 74
+ D+F++ DK+ DG + D+LK + T+DDIE +++ G NDG
Sbjct: 97 LSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMK-DGDKNNDG 146
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 34.3 bits (77), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDG 74
+ D+F++ DK+ DG + D+LK + T+DDIE +++ G NDG
Sbjct: 97 LSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMK-DGDKNNDG 146
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 34.3 bits (77), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDG 74
+ D+F++ DK+ DG + D+LK + T+DDIE +++ G NDG
Sbjct: 97 LSDLFRMWDKNADGYIDLDELKIMLQATGETITEDDIEELMK-DGDKNNDG 146
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 34.3 bits (77), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 27/42 (64%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
+++ F+V DKDG+G +S +L+ M TD++++ MIR
Sbjct: 82 LKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIR 123
Score = 30.0 bits (66), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 26 DVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDGVSSPSF 80
+ F + DKDGDG ++ +L + M T+ +++ MI D N + P F
Sbjct: 11 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 65
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 34.3 bits (77), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
+ + F+V DKDG+G +S +L+ M TD++++ MIR
Sbjct: 83 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIR 124
Score = 30.0 bits (66), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 26 DVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDGVSSPSF 80
+ F + DKDGDG ++ +L + M T+ +++ MI D N + P F
Sbjct: 12 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 66
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 34.3 bits (77), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 27/42 (64%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
+++ F+V DKDG+G +S +L+ M TD++++ MIR
Sbjct: 85 LKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIR 126
Score = 30.0 bits (66), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 26 DVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDGVSSPSF 80
+ F + DKDGDG ++ +L + M T+ +++ MI D N + P F
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 34.3 bits (77), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
+ + F+V DKDG+G +S +L+ M TD++++ MIR
Sbjct: 86 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDQMIR 127
Score = 30.0 bits (66), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 26 DVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDGVSSPSF 80
+ F + DKDGDG ++ +L + M T+ +++ MI D N + P F
Sbjct: 15 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 34.3 bits (77), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 27/42 (64%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
+++ F+V DKDG+G +S +L+ M TD++++ MIR
Sbjct: 85 LKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIR 126
Score = 29.6 bits (65), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 26 DVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDGVSSPSF 80
+ F + DKDGDG ++ +L + M T+ +++ MI D N + P F
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 34.3 bits (77), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
+ + F+V DKDG+G +S +L+ M TD++++ MIR
Sbjct: 83 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIR 124
Score = 30.0 bits (66), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 26 DVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDGVSSPSF 80
+ F + DKDGDG ++ +L + M T+ +++ MI D N + P F
Sbjct: 12 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 66
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 34.3 bits (77), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
+ + F+V DKDG+G +S +L+ M TD++++ MIR
Sbjct: 83 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIR 124
Score = 30.0 bits (66), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 26 DVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDGVSSPSF 80
+ F + DKDGDG ++ +L + M T+ +++ MI D N + P F
Sbjct: 12 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 66
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 34.3 bits (77), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
+ + F+V DKDG+G +S +L+ M TD++++ MIR
Sbjct: 82 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIR 123
Score = 30.0 bits (66), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 26 DVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDGVSSPSF 80
+ F + DKDGDG ++ +L + M T+ +++ MI D N + P F
Sbjct: 11 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 65
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 34.3 bits (77), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
+ + F+V DKDG+G +S +L+ M TD++++ MIR
Sbjct: 86 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIR 127
Score = 29.6 bits (65), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 26 DVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDGVSSPSF 80
+ F + DKDGDG ++ +L + M T+ +++ MI D N + P F
Sbjct: 15 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 34.3 bits (77), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
+ + F+V DKDG+G +S +L+ M TD++++ MIR
Sbjct: 86 IREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIR 127
Score = 30.0 bits (66), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 26 DVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDGVSSPSF 80
+ F + DKDGDG ++ +L + M T+ +++ MI D N + P F
Sbjct: 15 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 34.3 bits (77), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
+ + F+V DKDG+G +S +L+ M TD++++ MIR
Sbjct: 85 IREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIR 126
Score = 30.0 bits (66), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 26 DVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDGVSSPSF 80
+ F + DKDGDG ++ +L + M T+ +++ MI D N + P F
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 34.3 bits (77), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
+ + F+V DKDG+G +S +L+ M TD++++ MIR
Sbjct: 85 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIR 126
Score = 30.0 bits (66), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 26 DVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDGVSSPSF 80
+ F + DKDGDG ++ +L + M T+ +++ MI D N + P F
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 34.3 bits (77), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
+ + F+V DKDG+G +S +L+ M TD++++ MIR
Sbjct: 81 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIR 122
Score = 30.0 bits (66), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 26 DVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDGVSSPSF 80
+ F + DKDGDG ++ +L + M T+ +++ MI D N + P F
Sbjct: 10 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 64
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 34.3 bits (77), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
+ + F+V DKDG+G +S +L+ M TD++++ MIR
Sbjct: 91 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIR 132
Score = 30.0 bits (66), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 26 DVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDGVSSPSF 80
+ F + DKDGDG ++ +L + M T+ +++ MI D N + P F
Sbjct: 20 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 74
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 34.3 bits (77), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
+ + F+V DKDG+G +S +L+ M TD++++ MIR
Sbjct: 87 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIR 128
Score = 30.0 bits (66), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 26 DVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDGVSSPSF 80
+ F + DKDGDG ++ +L + M T+ +++ MI D N + P F
Sbjct: 16 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 70
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 34.3 bits (77), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
+ + F+V DKDG+G +S +L+ M TD++++ MIR
Sbjct: 84 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIR 125
Score = 30.0 bits (66), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 26 DVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDGVSSPSF 80
+ F + DKDGDG ++ +L + M T+ +++ MI D N + P F
Sbjct: 13 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 67
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 34.3 bits (77), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
+ + F+V DKDG+G +S +L+ M TD++++ MIR
Sbjct: 85 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIR 126
Score = 30.0 bits (66), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 26 DVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDGVSSPSF 80
+ F + DKDGDG ++ +L + M T+ +++ MI D N + P F
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 34.3 bits (77), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
+ + F+V DKDG+G +S +L+ M TD++++ MIR
Sbjct: 89 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIR 130
Score = 30.0 bits (66), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 26 DVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDGVSSPSF 80
+ F + DKDGDG ++ +L + M T+ +++ MI D N + P F
Sbjct: 18 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 72
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 34.3 bits (77), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
+ + F+V DKDG+G +S +L+ M TD++++ MIR
Sbjct: 86 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIR 127
Score = 30.0 bits (66), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 26 DVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDGVSSPSF 80
+ F + DKDGDG ++ +L + M T+ +++ MI D N + P F
Sbjct: 15 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 34.3 bits (77), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
+ + F+V DKDG+G +S +L+ M TD++++ MIR
Sbjct: 86 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIR 127
Score = 29.6 bits (65), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 26 DVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDGVSSPSF 80
+ F + DKDGDG ++ +L + M T+ +++ MI D N + P F
Sbjct: 15 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal
Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal
Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In
Calcium-Calmodulin: Solution Structure Of Halothane-Cam
C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe
Bound With Er Alpha Peptide
Length = 67
Score = 33.9 bits (76), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
+ + F+V DKDG+G +S +L+ M TD++++ MIR
Sbjct: 4 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIR 45
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 33.9 bits (76), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
+ + F+V DKDG+G +S +L+ M TD++++ MIR
Sbjct: 86 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIR 127
Score = 30.0 bits (66), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 26 DVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDGVSSPSF 80
+ F + DKDGDG ++ +L + M T+ +++ MI D N + P F
Sbjct: 15 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 33.9 bits (76), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
+ + F+V DKDG+G +S +L+ M TD++++ MIR
Sbjct: 85 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIR 126
Score = 27.7 bits (60), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 27/55 (49%)
Query: 26 DVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDGVSSPSF 80
+ F + DKDGDG ++ +L + M T+ +++ MI D + + P F
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEF 68
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 33.9 bits (76), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
+ + F+V DKDG+G +S +L+ M TD++++ MIR
Sbjct: 7 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIR 48
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The
Cardiac Regulatory Protein Troponin C
Length = 72
Score = 33.9 bits (76), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDG 74
+ D+F++ DK+ DG + D+LK + T+DDIE +++ G NDG
Sbjct: 8 LSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMK-DGDKNNDG 57
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 33.9 bits (76), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDG 74
+ D+F++ DK+ DG + D+LK + T+DDIE +++ G NDG
Sbjct: 97 LSDLFRMXDKNADGYIDLDELKIMLQATGETITEDDIEELMK-DGDKNNDG 146
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With
Pyrophosphate
Length = 67
Score = 33.9 bits (76), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
+ + F+V DKDG+G +S +L+ M TD++++ MIR
Sbjct: 7 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIR 48
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From
Calmodulin To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 33.9 bits (76), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
+ + F+V DKDG+G +S +L+ M TD++++ MIR
Sbjct: 8 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIR 49
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 33.9 bits (76), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
+ + F+V DKDG+G +S +L+ M TD++++ MIR
Sbjct: 83 IREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIR 124
Score = 30.0 bits (66), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 26 DVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDGVSSPSF 80
+ F + DKDGDG ++ +L + M T+ +++ MI D N + P F
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin
Carboxy-Terminal Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 33.9 bits (76), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
+ + F+V DKDG+G +S +L+ M TD++++ MIR
Sbjct: 10 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIR 51
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of
Bordetella Pertussis In Presence Of C-Terminal
Calmodulin And 1mm Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of
Bordetella Pertussis In Presence Of C-Terminal
Calmodulin
Length = 74
Score = 33.5 bits (75), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
+ + F+V DKDG+G +S +L+ M TD++++ MIR
Sbjct: 11 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIR 52
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 33.5 bits (75), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
+ + F+V DKDG+G +S +L+ M TD++++ MIR
Sbjct: 85 IREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIR 126
Score = 30.0 bits (66), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 26 DVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDGVSSPSF 80
+ F + DKDGDG ++ +L + M T+ +++ MI D N + P F
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 33.5 bits (75), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
+ + F+V DKDG+G +S +L+ M TD++++ MIR
Sbjct: 85 IREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIR 126
Score = 29.6 bits (65), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 26 DVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDGVSSPSF 80
+ F + DKDGDG ++ +L + M T+ +++ MI D N + P F
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 33.5 bits (75), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
+ + F+V DKDG+G +S +L+ M TD++++ MIR
Sbjct: 86 IREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIR 127
Score = 30.0 bits (66), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 26 DVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDGVSSPSF 80
+ F + DKDGDG ++ +L + M T+ +++ MI D N + P F
Sbjct: 15 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 33.5 bits (75), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
+ + F+V DKDG+G +S +L+ M TD++++ MIR
Sbjct: 86 IREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIR 127
Score = 30.0 bits (66), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 26 DVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDGVSSPSF 80
+ F + DKDGDG ++ +L + M T+ +++ MI D N + P F
Sbjct: 15 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 33.5 bits (75), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
+ + F+V DKDG+G +S +L+ M TD++++ MIR
Sbjct: 86 IREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIR 127
Score = 30.0 bits (66), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 26 DVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDGVSSPSF 80
+ F + DKDGDG ++ +L + M T+ +++ MI D N + P F
Sbjct: 15 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
>pdb|1EL4|A Chain A, Structure Of The Calcium-Regulated Photoprotein Obelin
Determined By Sulfur Sas
Length = 195
Score = 33.1 bits (74), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 27 VFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
VF + DKDG G ++ D+ K+Y + + + +D EA R
Sbjct: 118 VFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFR 156
>pdb|1QV0|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1QV1|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1SL9|A Chain A, Obelin From Obelia Longissima
Length = 195
Score = 33.1 bits (74), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 27 VFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
VF + DKDG G ++ D+ K+Y + + + +D EA R
Sbjct: 118 VFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFR 156
>pdb|2F8P|A Chain A, Crystal Structure Of Obelin Following Ca2+ Triggered
Bioluminescence Suggests Neutral Coelenteramide As The
Primary Excited State
Length = 195
Score = 33.1 bits (74), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 27 VFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
VF + DKDG G ++ D+ K+Y + + + +D EA R
Sbjct: 118 VFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFR 156
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 33.1 bits (74), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 26 DVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
+ FKV DK+GDG +S +LK + TD +++ M+R
Sbjct: 88 EAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDEMLR 127
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 33.1 bits (74), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDG 74
+ D+F++ DK+ DG + ++LK + T+DDIE +++ G NDG
Sbjct: 97 LSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMK-DGDKNNDG 146
>pdb|1SL7|A Chain A, Crystal Structure Of Calcium-Loaded Apo-Obelin From Obelia
Longissima
Length = 195
Score = 33.1 bits (74), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 27 VFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
VF + DKDG G ++ D+ K+Y + + + +D EA R
Sbjct: 118 VFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFR 156
>pdb|1JF2|A Chain A, Crystal Structure Of W92f Obelin Mutant From Obelia
Longissima At 1.72 Angstrom Resolution
pdb|1S36|A Chain A, Crystal Structure Of A Ca2+-Discharged Photoprotein:
Implications For The Mechanisms Of The Calcium Trigger
And The Bioluminescence
Length = 195
Score = 33.1 bits (74), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 27 VFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
VF + DKDG G ++ D+ K+Y + + + +D EA R
Sbjct: 118 VFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFR 156
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 33.1 bits (74), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDG 74
+ D+F++ DK+ DG + ++LK + T+DDIE +++ G NDG
Sbjct: 97 LSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMK-DGDKNNDG 146
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 33.1 bits (74), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
+ + F+V DKDG+G +S +L+ M TD++++ MIR
Sbjct: 31 IREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIR 72
>pdb|3KPX|A Chain A, Crystal Structure Analysis Of Photoprotein Clytin
Length = 198
Score = 33.1 bits (74), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 25 EDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
E VF + DKDG G +S D+ K+Y + +D+D E +
Sbjct: 119 EAVFDIFDKDGSGSISLDEWKTYGGISGICPSDEDAEKTFK 159
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 32.7 bits (73), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDG 74
+ D+F++ DK+ DG + ++LK + T+DDIE +++ G NDG
Sbjct: 97 LSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMK-DGDKNNDG 146
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 32.7 bits (73), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDG 74
+ D+F++ DK+ DG + ++LK + T+DDIE +++ G NDG
Sbjct: 7 LSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMK-DGDKNNDG 56
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 32.7 bits (73), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
+++ FKV DKD +G +S +L+ M TD+++E MI+
Sbjct: 11 LKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIK 52
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 32.7 bits (73), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDG 74
+ D+F++ DK+ DG + ++LK + T+DDIE +++ G NDG
Sbjct: 9 LSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMK-DGDKNNDG 58
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 32.7 bits (73), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 32/58 (55%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDGVSSPSFS 81
++ F+ D+DGDG ++ D+L+ M ++++AMIR D++ V+ F+
Sbjct: 8 LQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFA 65
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 32.7 bits (73), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
+++ FKV DKD +G +S +L+ M TD+++E MI+
Sbjct: 6 LKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIK 47
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 32.3 bits (72), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 31/57 (54%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDGVSSPSF 80
+ + F+V DKDG+G +S +L+ M +D++++ MIR D + V+ F
Sbjct: 85 IREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAADTDGDGQVNYEEF 141
Score = 25.4 bits (54), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%)
Query: 26 DVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDGVSSPSF 80
+ F + DKDGDG ++ +L + M T+ ++ M+ D N V P F
Sbjct: 14 EAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTVDFPEF 68
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr,
30 Structures
Length = 76
Score = 32.3 bits (72), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDG 74
+ D+F++ DK+ DG + ++LK + T+DDIE +++ G NDG
Sbjct: 12 LSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMK-DGDKNNDG 61
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 32.3 bits (72), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
+++ FKV DKD +G +S +L+ M TD+++E MI+
Sbjct: 85 LKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIK 126
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac
Troponin C Bound To The N Terminal Domain Of Cardiac
Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac
Troponin C Bound To The N Terminal Domain Of Cardiac
Troponin I
Length = 81
Score = 32.3 bits (72), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDG 74
+ D+F++ DK+ DG + ++LK + T+DDIE +++ G NDG
Sbjct: 17 LSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMK-DGDKNNDG 66
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 32.3 bits (72), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 26 DVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
+ FKV DK+GDG +S +LK + TD +++ M+R
Sbjct: 88 EAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLR 127
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 32.3 bits (72), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 26 DVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
+ FKV DK+GDG +S +LK + TD +++ M+R
Sbjct: 87 EAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLR 126
>pdb|1SL8|A Chain A, Calcium-Loaded Apo-Aequorin From Aequorea Victoria
Length = 191
Score = 32.0 bits (71), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 27 VFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDEN 72
+F ++DKD +G +S D+ K+Y A + +D E R+ DE+
Sbjct: 114 LFDIIDKDQNGAISLDEWKAYTKSAGIIQSSEDCEETFRVCDIDES 159
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 32.0 bits (71), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 25 EDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDGVSSPSF 80
++ F + DKDGDG ++ +L + M T+ +++ MI D N + P F
Sbjct: 13 KEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTIDFPEF 68
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 25/42 (59%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
+ + FKV D+DG+G +S +L + M + + ++E +I+
Sbjct: 38 IREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQ 79
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 31.2 bits (69), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 26/42 (61%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
+++ F+V DKD +G +S +L+ M TD++++ MIR
Sbjct: 86 LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIR 127
Score = 28.5 bits (62), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 26 DVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDGVSSPSF 80
+ F + DKDGDG ++ +L + M T+ +++ MI D N + P F
Sbjct: 15 EAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 31.2 bits (69), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 26/42 (61%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
+++ F+V DKD +G +S +L+ M TD++++ MIR
Sbjct: 86 LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIR 127
Score = 28.5 bits (62), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 26 DVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDGVSSPSF 80
+ F + DKDGDG ++ +L + M T+ +++ MI D N + P F
Sbjct: 15 EAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
>pdb|1UHH|A Chain A, Crystal Structure Of Cp-Aequorin
pdb|1UHH|B Chain B, Crystal Structure Of Cp-Aequorin
pdb|1UHJ|A Chain A, Crystal Structure Of Br-Aequorin
pdb|1UHJ|B Chain B, Crystal Structure Of Br-Aequorin
Length = 191
Score = 31.2 bits (69), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 26/46 (56%)
Query: 27 VFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDEN 72
+F ++DKD +G ++ D+ K+Y A + +D E R+ DE+
Sbjct: 114 LFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDES 159
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 26/42 (61%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
+++ F+V DKD +G +S +L+ M TD++++ MIR
Sbjct: 6 LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIR 47
>pdb|1EJ3|A Chain A, Crystal Structure Of Aequorin
pdb|1EJ3|B Chain B, Crystal Structure Of Aequorin
pdb|1UHI|A Chain A, Crystal Structure Of I-aequorin
pdb|1UHI|B Chain B, Crystal Structure Of I-aequorin
pdb|1UHK|A Chain A, Crystal Structure Of N-Aequorin
pdb|1UHK|B Chain B, Crystal Structure Of N-Aequorin
Length = 191
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 26/46 (56%)
Query: 27 VFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDEN 72
+F ++DKD +G ++ D+ K+Y A + +D E R+ DE+
Sbjct: 114 LFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDES 159
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 30.4 bits (67), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 25 EDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDGVSSPSF 80
++ F + DKDGDG ++ +L + M T+ +++ MI D N + P F
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin
Amino- Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 30.4 bits (67), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 25 EDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDGVSSPSF 80
++ F + DKDGDG ++ +L + M T+ +++ MI D N + P F
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal
Domain
Length = 76
Score = 30.4 bits (67), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 25 EDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDGVSSPSF 80
++ F + DKDGDG ++ +L + M T+ +++ MI D N + P F
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal
Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In
Calcium-Calmodulin: Solution Structure Of Halothane-Cam
N-Terminal Domain
Length = 76
Score = 30.4 bits (67), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 25 EDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDGVSSPSF 80
++ F + DKDGDG ++ +L + M T+ +++ MI D N + P F
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
Length = 79
Score = 30.4 bits (67), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 25 EDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDGVSSPSF 80
++ F + DKDGDG ++ +L + M T+ +++ MI D N + P F
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A
Binding Motif (Nscate) Peptide From The N-Terminal
Cytoplasmic Domain Of The L-Type Voltage-Cated Calcium
Channel Alpha1c Subunit
Length = 77
Score = 30.4 bits (67), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 25 EDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDGVSSPSF 80
++ F + DKDGDG ++ +L + M T+ +++ MI D N + P F
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe
Bound With Er Alpha Peptide
Length = 80
Score = 30.4 bits (67), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 25 EDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDGVSSPSF 80
++ F + DKDGDG ++ +L + M T+ +++ MI D N + P F
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
>pdb|1JF0|A Chain A, The Crystal Structure Of Obelin From Obelia Geniculata At
1.82 A Resolution
Length = 195
Score = 30.4 bits (67), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 23/39 (58%)
Query: 27 VFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
VF + DKDG G ++ D+ K+Y + + +++D E +
Sbjct: 118 VFDIFDKDGSGTITLDEWKAYGRISGISPSEEDCEKTFQ 156
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 30.0 bits (66), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 26 DVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDGVSSPSF 80
+ F + DKDGDG ++ +L + M T+ +++ MI D N + P F
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 29.6 bits (65), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 26 DVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIE 61
+ FKV DK+GDG +S +LK + TD ++E
Sbjct: 87 EAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAELE 122
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 29.6 bits (65), Expect = 0.40, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 25/41 (60%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMI 64
ME FK+ DKDG G++S +L + A + +++E++I
Sbjct: 419 MERAFKMFDKDGSGKISTKELFKLFSQADSSIQMEELESII 459
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 29.6 bits (65), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 28/57 (49%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDGVSSPSF 80
++ F + DKDGDG ++ +L + M T+ +++ MI D N + P F
Sbjct: 12 FKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 29.3 bits (64), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 24/42 (57%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
+ + F+V DKDG+G +S +L+ TD++++ IR
Sbjct: 86 IREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDQXIR 127
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 29.3 bits (64), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 24/42 (57%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
+ + F+V DKDG+G +S +L+ TD++++ IR
Sbjct: 85 IREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIR 126
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 29.3 bits (64), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 24/42 (57%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
+ + F+V DKDG+G +S +L+ TD++++ IR
Sbjct: 85 IREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIR 126
Score = 25.8 bits (55), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 14/57 (24%), Positives = 27/57 (47%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDGVSSPSF 80
++ F + DKDGDG ++ +L + T+ +++ I D N ++ P F
Sbjct: 12 FKEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGNGTINFPEF 68
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 29.3 bits (64), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 25/42 (59%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
+ED F++ DK+ DG + ++L + T++DIE +++
Sbjct: 98 LEDCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMK 139
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 28.5 bits (62), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 13/49 (26%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 26 DVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDG 74
++F++ D++ DG + ++L + TD++IE++++ G NDG
Sbjct: 97 ELFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMK-DGDKNNDG 144
>pdb|1OE9|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|B Chain B, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 151
Score = 28.5 bits (62), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 13/53 (24%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 28 FKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDGVSSPSF 80
F+V DK+G+G++ +L+ + T++++E ++ G D N ++ +F
Sbjct: 93 FRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLA-GHEDSNGCINYEAF 144
>pdb|3I5G|B Chain B, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|B Chain B, The Crystal Structure Of Rigor Like Squid Myosin S1 In
The Absence Of Nucleotide
pdb|3I5I|B Chain B, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|B Chain B, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 153
Score = 28.5 bits (62), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 27/49 (55%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDEN 72
+++ F ++D+D DG + +DLK + DD++ AM++ G N
Sbjct: 18 LKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLKECPGQLN 66
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 11/42 (26%), Positives = 24/42 (57%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
M D F+ +DK+G+G + +L+ + A T ++E +++
Sbjct: 78 MLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMK 119
Score = 26.2 bits (56), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 9/25 (36%), Positives = 19/25 (76%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYM 48
+++ F++ DKD DG++S ++L S +
Sbjct: 7 IQECFQIFDKDNDGKVSIEELGSAL 31
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 10/37 (27%), Positives = 23/37 (62%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDI 60
++ ++K+MD DGDG+L+ +++ ++ + D I
Sbjct: 77 LKILYKLMDADGDGKLTKEEVTTFFKKFGYEKVVDQI 113
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 9/28 (32%), Positives = 22/28 (78%)
Query: 23 LMEDVFKVMDKDGDGRLSHDDLKSYMNC 50
+ E +FK +D +GDG +S++++K++++
Sbjct: 1 MAEALFKQLDANGDGSVSYEEVKAFVSS 28
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human
N60d Calmodulin Refined With Paramagnetism Based
Strategy
Length = 79
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 28/56 (50%)
Query: 25 EDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDGVSSPSF 80
++ F + DKDGDG ++ +L + M T+ +++ MI D + + P F
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEF 68
>pdb|1Y1X|A Chain A, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
pdb|1Y1X|B Chain B, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
Length = 191
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 10/42 (23%), Positives = 25/42 (59%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
M + F+ D GDGRL +++++ + + + ++ +A++R
Sbjct: 95 MREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMR 136
>pdb|1WDC|B Chain B, Scallop Myosin Regulatory Domain
pdb|1B7T|Y Chain Y, Myosin Digested By Papain
pdb|1KK7|Y Chain Y, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|B Chain B, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|B Chain B, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|B Chain B, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Y Chain Y, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility
And Function In The Head
pdb|1S5G|Y Chain Y, Structure Of Scallop Myosin S1 Reveals A Novel
Nucleotide Conformation
pdb|1SR6|B Chain B, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JTD|B Chain B, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
pdb|3JVT|B Chain B, Calcium-Bound Scallop Myosin Regulatory Domain (Lever
Arm) With Reconstituted Complete Light Chains
Length = 156
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 27/49 (55%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDEN 72
M++ F ++D D DG +S +D+K+ A D ++ AM++ G N
Sbjct: 20 MKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEAPGPLN 68
>pdb|1KK8|B Chain B, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 139
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 27/49 (55%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDEN 72
M++ F ++D D DG +S +D+K+ A D ++ AM++ G N
Sbjct: 8 MKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEAPGPLN 56
>pdb|1DFK|Y Chain Y, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Y Chain Y, Scallop Myosin S1 Complexed With
Mgadp:vanadate-Transition State
pdb|1DFL|W Chain W, Scallop Myosin S1 Complexed With
Mgadp:vanadate-Transition State
Length = 139
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 27/49 (55%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDEN 72
M++ F ++D D DG +S +D+K+ A D ++ AM++ G N
Sbjct: 9 MKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEAPGPLN 57
>pdb|2FCD|A Chain A, Solution Structure Of N-Lobe Myosin Light Chain From
Saccharomices Cerevisiae
Length = 78
Score = 28.1 bits (61), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 11/40 (27%), Positives = 22/40 (55%)
Query: 25 EDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMI 64
+D+F + DK G G ++ D L Y+ + T+ ++ +I
Sbjct: 7 KDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDII 46
>pdb|1SCM|B Chain B, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 145
Score = 27.7 bits (60), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 27/49 (55%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDEN 72
M++ F ++D D DG +S +D+K+ A D ++ AM++ G N
Sbjct: 9 MKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEAPGPLN 57
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Query: 28 FKVMDKDGDGRLSHDDLKSYMN-CASFAATDDDIEAMIRLGGGDENDGVSSPSF 80
FKV D +GDG + D+ K M TD ++E ++ D N + P F
Sbjct: 14 FKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEF 67
>pdb|2W4T|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 136
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 27/49 (55%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDEN 72
M++ F ++D D DG +S +D+K+ A D ++ AM++ G N
Sbjct: 6 MKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEAPGPLN 54
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/49 (26%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 26 DVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDG 74
+ F++ D++ DG + ++L + TD++IE++++ G NDG
Sbjct: 97 ECFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMK-DGDKNNDG 144
>pdb|1KK8|C Chain C, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 154
Score = 27.7 bits (60), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 11/41 (26%), Positives = 24/41 (58%)
Query: 26 DVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRL 66
+ FK D++G G +S +L+ + +D+D++ +I+L
Sbjct: 88 EAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKL 128
>pdb|3JTD|C Chain C, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
Length = 156
Score = 27.7 bits (60), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 11/41 (26%), Positives = 24/41 (58%)
Query: 26 DVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRL 66
+ FK D++G G +S +L+ + +D+D++ +I+L
Sbjct: 88 EAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKL 128
>pdb|1DFK|Z Chain Z, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Z Chain Z, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|X Chain X, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 152
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 11/41 (26%), Positives = 24/41 (58%)
Query: 26 DVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRL 66
+ FK D++G G +S +L+ + +D+D++ +I+L
Sbjct: 86 EAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKL 126
>pdb|1M46|A Chain A, Crystal Structure Of Mlc1p Bound To Iq4 Of Myo2p, A
Class V Myosin
pdb|1M45|A Chain A, Crystal Structure Of Mlc1p Bound To Iq2 Of Myo2p, A
Class V Myosin
pdb|1N2D|A Chain A, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p,
A Class V Myosin
pdb|1N2D|B Chain B, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p,
A Class V Myosin
Length = 148
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 11/40 (27%), Positives = 22/40 (55%)
Query: 25 EDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMI 64
+D+F + DK G G ++ D L Y+ + T+ ++ +I
Sbjct: 7 KDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDII 46
>pdb|1WDC|C Chain C, Scallop Myosin Regulatory Domain
pdb|1B7T|Z Chain Z, Myosin Digested By Papain
pdb|1KK7|Z Chain Z, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|C Chain C, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|C Chain C, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|C Chain C, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Z Chain Z, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Z Chain Z, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|C Chain C, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JVT|C Chain C, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 11/41 (26%), Positives = 24/41 (58%)
Query: 26 DVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRL 66
+ FK D++G G +S +L+ + +D+D++ +I+L
Sbjct: 88 EAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKL 128
>pdb|5PAL|A Chain A, Crystal Structure Of The Unique Parvalbumin Component
From Muscle Of The Leopard Shark (Triakis
Semifasciata). The First X-Ray Study Of An
Alpha-Parvalbumin
Length = 109
Score = 27.3 bits (59), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 21 DGLMEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATD-DDIEAMIRLGGGD 70
D +++VF+++DKD G + ++LK + S D +D E L GD
Sbjct: 40 DAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGD 90
>pdb|1SCM|C Chain C, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 149
Score = 27.3 bits (59), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 11/41 (26%), Positives = 24/41 (58%)
Query: 26 DVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRL 66
+ FK D++G G +S +L+ + +D+D++ +I+L
Sbjct: 85 EAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKL 125
>pdb|2W4T|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 151
Score = 27.3 bits (59), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 11/41 (26%), Positives = 24/41 (58%)
Query: 26 DVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRL 66
+ FK D++G G +S +L+ + +D+D++ +I+L
Sbjct: 85 EAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKL 125
>pdb|3TZ1|A Chain A, Crystal Structure Of The Ca2+-saturated C-terminal
Domain Of Akazara Scallop Troponin C In Complex With A
Troponin I Fragment
Length = 74
Score = 27.3 bits (59), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 24/41 (58%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMI 64
+++ F+V+DK+ G + D L+ + T+D+IE MI
Sbjct: 9 LKEAFRVLDKEKKGVIKVDVLRWILKSLGDELTEDEIENMI 49
>pdb|2MYS|B Chain B, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
pdb|1I84|U Chain U, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C
Alphas Provided For Regulatory Light Chain. Only
Backbone Atoms Provided For S2 Fragment.
pdb|1I84|Z Chain Z, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C
Alphas Provided For Regulatory Light Chain. Only
Backbone Atoms Provided For S2 Fragment
Length = 166
Score = 27.3 bits (59), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/50 (26%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLK-SYMNCASFAATDDDIEAMIRLGGGDEN 72
++ F V+D++ DG + DDL+ ++ +++++AMI+ G N
Sbjct: 27 FKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKEASGPIN 76
>pdb|1M8Q|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|T Chain T, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 145
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLK-SYMNCASFAATDDDIEAMIRLGGGDENDGVSSPSF 80
++ F V+D++ DG + DDL+ ++ +++++AMI+ G N V F
Sbjct: 9 FKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKEASGPINFTVFLTMF 66
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium Bound
Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 9/23 (39%), Positives = 18/23 (78%)
Query: 27 VFKVMDKDGDGRLSHDDLKSYMN 49
++K+MD DGDG+L+ +++ S+
Sbjct: 80 LYKLMDVDGDGKLTKEEVTSFFK 102
Score = 25.8 bits (55), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 9/25 (36%), Positives = 21/25 (84%)
Query: 25 EDVFKVMDKDGDGRLSHDDLKSYMN 49
E +FK +D +GDG +S++++K++++
Sbjct: 3 EALFKEIDVNGDGAVSYEEVKAFVS 27
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 11/41 (26%), Positives = 25/41 (60%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMI 64
+ + F++ DK+G+G +S D ++ + + +D++AMI
Sbjct: 93 LREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMI 133
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 9/23 (39%), Positives = 18/23 (78%)
Query: 27 VFKVMDKDGDGRLSHDDLKSYMN 49
++K+MD DGDG+L+ +++ S+
Sbjct: 80 LYKLMDVDGDGKLTKEEVTSFFK 102
Score = 25.8 bits (55), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 9/27 (33%), Positives = 22/27 (81%)
Query: 23 LMEDVFKVMDKDGDGRLSHDDLKSYMN 49
+ E +FK +D +GDG +S++++K++++
Sbjct: 1 MAEALFKEIDVNGDGAVSYEEVKAFVS 27
>pdb|1DGU|A Chain A, Homology-Based Model Of Calcium-Saturated Cib (Calcium-And
Integrin-Binding Protein)
pdb|1DGV|A Chain A, Homology-Based Model Of Apo Cib (Calcium-And Integrin-
Binding Protein)
pdb|1XO5|A Chain A, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1XO5|B Chain B, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1Y1A|A Chain A, Crystal Structure Of Calcium And Integrin Binding Protein
pdb|1Y1A|B Chain B, Crystal Structure Of Calcium And Integrin Binding Protein
Length = 183
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 28 FKVMDKDGDGRLSHDDLKSYMNCAS 52
F++ D D DG L+ +DL +NC +
Sbjct: 104 FRIFDFDDDGTLNREDLSRLVNCLT 128
>pdb|2L4H|A Chain A, The Solution Structure Of Calcium Bound Cib1
pdb|2L4I|A Chain A, The Solution Structure Of Magnesium Bound Cib1
pdb|2LM5|A Chain A, Solution Structure Of Ca2+-Cib1 In Complex With The
Cytoplasmic Domain Of The Integrin Aiib Subunit
Length = 214
Score = 26.9 bits (58), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 28 FKVMDKDGDGRLSHDDLKSYMNCAS 52
F++ D D DG L+ +DL +NC +
Sbjct: 135 FRIFDFDDDGTLNREDLSRLVNCLT 159
>pdb|2I18|A Chain A, The Refined Structure Of C-Terminal Domain Of An Ef-Hand
Calcium Binding Protein From Entamoeba Histolytica
Length = 64
Score = 26.9 bits (58), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 9/23 (39%), Positives = 18/23 (78%)
Query: 27 VFKVMDKDGDGRLSHDDLKSYMN 49
++K+MD DGDG+L+ +++ S+
Sbjct: 10 LYKLMDVDGDGKLTKEEVTSFFK 32
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 26.9 bits (58), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 28 FKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
F DKDG G ++ D+L+ C F D IE + R
Sbjct: 105 FTYFDKDGSGYITPDELQ--QACEEFGVEDVRIEELXR 140
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 26.9 bits (58), Expect = 3.1, Method: Composition-based stats.
Identities = 10/21 (47%), Positives = 16/21 (76%)
Query: 24 MEDVFKVMDKDGDGRLSHDDL 44
+ D+FK +DK+GDG+L +L
Sbjct: 357 LTDIFKKLDKNGDGQLDKKEL 377
>pdb|2XSJ|B Chain B, Structure Of Desulforubidin From Desulfomicrobium
Norvegicum
pdb|2XSJ|E Chain E, Structure Of Desulforubidin From Desulfomicrobium
Norvegicum
Length = 386
Score = 26.9 bits (58), Expect = 3.2, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 47 YMNCASFAATDDDIEAMIRLGGGDENDGVSSPSFS 81
Y C S +D + ++ + GG ++ +S+P FS
Sbjct: 270 YTMCPSLPLSDQTGDGLVIMAGGKVSNRISNPKFS 304
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal
Sensor Domain Of Centrin
Length = 96
Score = 26.9 bits (58), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 7/54 (12%)
Query: 18 NGKDGLMED-------VFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMI 64
G+ GL E+ F + D DG G + +LK M F ++I+ MI
Sbjct: 19 KGRVGLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMI 72
>pdb|3CB2|A Chain A, Crystal Structure Of Human Gamma-Tubulin Bound To Gdp
pdb|3CB2|B Chain B, Crystal Structure Of Human Gamma-Tubulin Bound To Gdp
Length = 475
Score = 26.9 bits (58), Expect = 3.2, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
Query: 25 EDVFKVMDKDGDGRLSHDDLKSYMNCASFAA 55
ED+F ++D++ DG D L+ ++ C S A
Sbjct: 116 EDIFDIIDREADGS---DSLEGFVLCHSIAG 143
>pdb|1Z5V|A Chain A, Crystal Structure Of Human Gamma-Tubulin Bound To
Gtpgammas
pdb|1Z5W|A Chain A, Crystal Structure Of Gamma-Tubulin Bound To Gtp
Length = 474
Score = 26.9 bits (58), Expect = 3.2, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
Query: 25 EDVFKVMDKDGDGRLSHDDLKSYMNCASFAA 55
ED+F ++D++ DG D L+ ++ C S A
Sbjct: 116 EDIFDIIDREADGS---DSLEGFVLCHSIAG 143
>pdb|2W4A|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 150
Score = 26.9 bits (58), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLK-SYMNCASFAATDDDIEAMIRLGGGDENDGVSSPSF 80
++ F V+D++ DG + DDL+ ++ +++++AMI+ G N V F
Sbjct: 14 FKEAFTVIDQNRDGIIDKDDLRETFAAMGRLNVKNEELDAMIKEASGPINFTVFLTMF 71
>pdb|3LI6|A Chain A, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|D Chain D, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|G Chain G, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|J Chain J, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
Length = 66
Score = 26.6 bits (57), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 9/27 (33%), Positives = 22/27 (81%)
Query: 23 LMEDVFKVMDKDGDGRLSHDDLKSYMN 49
+ E +FK +D +GDG +S++++K++++
Sbjct: 1 MAEALFKEIDVNGDGAVSYEEVKAFVS 27
>pdb|1BU3|A Chain A, Refined Crystal Structure Of Calcium-Bound Silver Hake
(Pi 4.2) Parvalbumin At 1.65 A
Length = 109
Score = 26.6 bits (57), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAA---TDDDIEAMIRLGGGD 70
++ F V+D+D G + D+LK ++ S A TD + +A ++ G D
Sbjct: 44 IKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKAFLKAGDSD 93
>pdb|3AAK|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-20alg-2f122a
Length = 172
Score = 26.6 bits (57), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 11/42 (26%), Positives = 24/42 (57%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
++VF+ D+D G + ++LK ++ A + +D + +IR
Sbjct: 76 WQNVFRTYDRDNSGMIDKNELKQALSGAGYRLSDQFHDILIR 117
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 26.6 bits (57), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 11/40 (27%), Positives = 23/40 (57%)
Query: 26 DVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
D F++ DK+ DG + ++L + T++DIE +++
Sbjct: 100 DCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMK 139
>pdb|2KYC|A Chain A, Solution Structure Of Ca-Free Chicken Parvalbumin 3
(Cpv3)
pdb|2KYF|A Chain A, Solution Structure Of Calcium-Bound Cpv3
Length = 108
Score = 26.2 bits (56), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 7/26 (26%), Positives = 18/26 (69%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMN 49
++++F+++D D G + D+LK ++
Sbjct: 43 LKEIFRILDNDQSGFIEEDELKYFLQ 68
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 26.2 bits (56), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 11/41 (26%), Positives = 25/41 (60%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMI 64
+ + F++ DK+G+G +S D ++ + + +D++AMI
Sbjct: 5 LREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMI 45
>pdb|1ZMZ|A Chain A, Solution Structure Of The N-Terminal Domain (M1-S98) Of
Human Centrin 2
Length = 98
Score = 26.2 bits (56), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMI 64
+ + F + D DG G + +LK M F ++I+ MI
Sbjct: 33 IREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMI 73
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 26.2 bits (56), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 10/26 (38%), Positives = 17/26 (65%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMN 49
+ + F+V DKDG+G +S +L+ M
Sbjct: 40 IREAFRVFDKDGNGYISAAELRHVMT 65
>pdb|3A8R|A Chain A, The Structure Of The N-Terminal Regulatory Domain Of A
Plant Nadph Oxidase
pdb|3A8R|B Chain B, The Structure Of The N-Terminal Regulatory Domain Of A
Plant Nadph Oxidase
Length = 179
Score = 25.8 bits (55), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 22/37 (59%)
Query: 18 NGKDGLMEDVFKVMDKDGDGRLSHDDLKSYMNCASFA 54
G D + F ++DK+ DGRL+ +++K + ++ A
Sbjct: 94 QGFDNRLRTFFDMVDKNADGRLTAEEVKEIIALSASA 130
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 25.8 bits (55), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 7/54 (12%)
Query: 18 NGKDGLMED-------VFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMI 64
G+ GL E+ F + D DG G + +LK M F ++I+ MI
Sbjct: 17 KGRVGLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMI 70
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 25.8 bits (55), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMI 64
+ + F + D DG G + +LK M F ++I+ MI
Sbjct: 10 IREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMI 50
>pdb|2OS8|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of
This Allosteric Motor
pdb|2OTG|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of
This Allosteric Motor
Length = 157
Score = 25.4 bits (54), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 13/49 (26%), Positives = 26/49 (53%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDEN 72
M++ F ++D++ DG + +DLK + D ++ AM++ G N
Sbjct: 21 MKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKEAPGPLN 69
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 25.4 bits (54), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 17/23 (73%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKS 46
+E F+ D+DG+G++S D+L S
Sbjct: 145 LESAFQKFDQDGNGKISVDELAS 167
Score = 25.0 bits (53), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 9/21 (42%), Positives = 16/21 (76%)
Query: 24 MEDVFKVMDKDGDGRLSHDDL 44
+ D+F+ +DK+GDG+L +L
Sbjct: 65 LTDIFRHIDKNGDGQLDRQEL 85
>pdb|3TUY|B Chain B, Phosphorylated Light Chain Domain Of Scallop Smooth
Muscle Myosin
pdb|3TUY|E Chain E, Phosphorylated Light Chain Domain Of Scallop Smooth
Muscle Myosin
Length = 161
Score = 25.4 bits (54), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 29/58 (50%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDGVSSPSFS 81
M++ F ++D++ DG + +DLK + D ++ AM++ G N + FS
Sbjct: 25 MKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKEAPGPLNFTMFLSIFS 82
>pdb|3PN7|B Chain B, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|E Chain E, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|B Chain B, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|E Chain E, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
Length = 161
Score = 25.4 bits (54), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 13/49 (26%), Positives = 26/49 (53%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDEN 72
M++ F ++D++ DG + +DLK + D ++ AM++ G N
Sbjct: 25 MKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKEAPGPLN 73
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 25.4 bits (54), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMN-CASFAATDDDIEAMIR 65
+ D F+ D +GDG +S +L+ M DIE +IR
Sbjct: 9 LRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIR 51
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 25.4 bits (54), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 14/57 (24%), Positives = 29/57 (50%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDGVSSPSF 80
++ F + DKDGDG ++ ++L + + T+++++ MI D N + F
Sbjct: 12 FKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEF 68
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 25.4 bits (54), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 10/38 (26%), Positives = 22/38 (57%)
Query: 28 FKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
F++ DK+ DG + ++L + T++DIE +++
Sbjct: 99 FRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMK 136
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 25.4 bits (54), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 10/38 (26%), Positives = 22/38 (57%)
Query: 28 FKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIR 65
F++ DK+ DG + ++L + T++DIE +++
Sbjct: 102 FRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMK 139
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 25.0 bits (53), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 17/23 (73%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKS 46
+E F+ D+DG+G++S D+L S
Sbjct: 428 LESAFQKFDQDGNGKISVDELAS 450
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 25.0 bits (53), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 14/57 (24%), Positives = 29/57 (50%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMIRLGGGDENDGVSSPSF 80
++ F + DKDGDG ++ ++L + + T+++++ MI D N + F
Sbjct: 12 FKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEF 68
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 25.0 bits (53), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMN-CASFAATDDDIEAMIR 65
+ D F+ D +GDG +S +L+ M DIE +IR
Sbjct: 104 LRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIR 146
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 25.0 bits (53), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 24 MEDVFKVMDKDGDGRLSHDDLKSYMNCASFAATDDDIEAMI 64
+ + F + D DG G + +LK M F ++I+ MI
Sbjct: 8 IREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMI 48
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.313 0.135 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,320,636
Number of Sequences: 62578
Number of extensions: 80276
Number of successful extensions: 562
Number of sequences better than 100.0: 215
Number of HSP's better than 100.0 without gapping: 192
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 238
Number of HSP's gapped (non-prelim): 354
length of query: 81
length of database: 14,973,337
effective HSP length: 50
effective length of query: 31
effective length of database: 11,844,437
effective search space: 367177547
effective search space used: 367177547
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 45 (21.9 bits)