BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047968
(81 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P79769|TSN_CHICK Translin OS=Gallus gallus GN=TSN PE=1 SV=1
Length = 229
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 48/66 (72%)
Query: 1 PRYVVNQVLAGNYDCPRKVLRFLTDLHAAFRMLNLRNDFLRKKFDSLKYDLKRVEEVYYD 60
R VN V AG+Y P ++ F+ +L + FR+LNL+ND LRK++D LKYD+K++EEV YD
Sbjct: 152 ARLAVNSVTAGDYSRPLRISTFINELDSGFRLLNLKNDSLRKRYDGLKYDVKKIEEVVYD 211
Query: 61 MKIRHL 66
+ IR L
Sbjct: 212 LSIRGL 217
>sp|P97891|TSN_CRIGR Translin OS=Cricetulus griseus GN=TSN PE=2 SV=1
Length = 228
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
Query: 1 PRYVVNQVLAGNYDCPRKVLRFLTDLHAAFRMLNLRNDFLRKKFDSLKYDLKRVEEVYYD 60
R VN V AG+Y P + F+ +L + FR+LNL+ND LRK++D LKYD+K+VEEV YD
Sbjct: 152 SRLSVNSVTAGDYSRPLHISTFINELDSGFRLLNLKNDSLRKRYDGLKYDVKKVEEVVYD 211
Query: 61 MKIRHLANGDSAEDNG 76
+ IR N ++A G
Sbjct: 212 LSIRGF-NKETAAACG 226
>sp|Q62348|TSN_MOUSE Translin OS=Mus musculus GN=Tsn PE=1 SV=1
Length = 228
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
Query: 1 PRYVVNQVLAGNYDCPRKVLRFLTDLHAAFRMLNLRNDFLRKKFDSLKYDLKRVEEVYYD 60
R VN V AG+Y P + F+ +L + FR+LNL+ND LRK++D LKYD+K+VEEV YD
Sbjct: 152 SRLSVNSVTAGDYSRPLHISTFINELDSGFRLLNLKNDSLRKRYDGLKYDVKKVEEVVYD 211
Query: 61 MKIRHLANGDSAEDNG 76
+ IR N ++A G
Sbjct: 212 LSIRGF-NKETAAACG 226
>sp|Q08DM8|TSN_BOVIN Translin OS=Bos taurus GN=TSN PE=2 SV=1
Length = 228
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 46/64 (71%)
Query: 1 PRYVVNQVLAGNYDCPRKVLRFLTDLHAAFRMLNLRNDFLRKKFDSLKYDLKRVEEVYYD 60
R VN V AG+Y P + F+ +L + FR+LNL+ND LRK++D LKYD+K+VEEV YD
Sbjct: 152 SRLSVNSVTAGDYSRPLHISTFINELDSGFRLLNLKNDSLRKRYDGLKYDVKKVEEVVYD 211
Query: 61 MKIR 64
+ IR
Sbjct: 212 LSIR 215
>sp|Q15631|TSN_HUMAN Translin OS=Homo sapiens GN=TSN PE=1 SV=1
Length = 228
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 46/63 (73%)
Query: 2 RYVVNQVLAGNYDCPRKVLRFLTDLHAAFRMLNLRNDFLRKKFDSLKYDLKRVEEVYYDM 61
R VN V AG+Y P + F+ +L + FR+LNL+ND LRK++D LKYD+K+VEEV YD+
Sbjct: 153 RLSVNSVTAGDYSRPLHISTFINELDSGFRLLNLKNDSLRKRYDGLKYDVKKVEEVVYDL 212
Query: 62 KIR 64
IR
Sbjct: 213 SIR 215
>sp|Q5R7P2|TSN_PONAB Translin OS=Pongo abelii GN=TSN PE=2 SV=1
Length = 228
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 46/63 (73%)
Query: 2 RYVVNQVLAGNYDCPRKVLRFLTDLHAAFRMLNLRNDFLRKKFDSLKYDLKRVEEVYYDM 61
R VN V AG+Y P + F+ +L + FR+LNL+ND LRK++D LKYD+K+VEEV YD+
Sbjct: 153 RLSVNSVTAGDYSRPLHISTFINELDSGFRLLNLKNDSLRKRYDGLKYDVKKVEEVVYDL 212
Query: 62 KIR 64
IR
Sbjct: 213 SIR 215
>sp|Q9P7V3|TSN1_SCHPO Translin-1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=tsn1 PE=1 SV=2
Length = 220
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 47/66 (71%)
Query: 2 RYVVNQVLAGNYDCPRKVLRFLTDLHAAFRMLNLRNDFLRKKFDSLKYDLKRVEEVYYDM 61
R VN V++GNY P + L + +H++F++L+L+ND LR+ FD LKYDLKR E+V YD+
Sbjct: 155 RQSVNSVISGNYHIPFEALNTIQKVHSSFQVLSLKNDSLRRHFDGLKYDLKRSEDVVYDL 214
Query: 62 KIRHLA 67
+I L
Sbjct: 215 RIHKLV 220
>sp|Q9QZE7|TSNAX_MOUSE Translin-associated protein X OS=Mus musculus GN=Tsnax PE=1 SV=1
Length = 290
Score = 34.7 bits (78), Expect = 0.17, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 2 RYVVNQVLAGNYDCPRKVLRFLTDLHAAFRMLNLRNDF-LRKKFDSLKYDLKRVEEVYYD 60
R +N V G+ D P +V +FL ++ F + + + KK +LK L +VE Y
Sbjct: 200 RMCINSVGNGDIDTPFEVSQFLRQVYDGFSFIGNTGPYEVSKKLYTLKQSLAKVENACYA 259
Query: 61 MKIR 64
+K+R
Sbjct: 260 LKVR 263
>sp|Q9JHB5|TSNAX_RAT Translin-associated protein X OS=Rattus norvegicus GN=Tsnax PE=1
SV=1
Length = 290
Score = 34.7 bits (78), Expect = 0.18, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 2 RYVVNQVLAGNYDCPRKVLRFLTDLHAAFRMLNLRNDF-LRKKFDSLKYDLKRVEEVYYD 60
R +N V G+ D P +V +FL ++ F + + + KK +LK L +VE Y
Sbjct: 200 RMCINSVGNGDIDTPFEVSQFLRQVYDGFSFIGNTGPYEVSKKLYTLKQSLSKVENACYA 259
Query: 61 MKIR 64
+K+R
Sbjct: 260 LKVR 263
>sp|Q5RC21|TSNAX_PONAB Translin-associated protein X OS=Pongo abelii GN=TSNAX PE=2 SV=1
Length = 290
Score = 34.3 bits (77), Expect = 0.26, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 2 RYVVNQVLAGNYDCPRKVLRFLTDLHAAFRMLNLRNDF-LRKKFDSLKYDLKRVEEVYYD 60
R +N V G+ D P +V +FL ++ F + + + KK +LK L +VE Y
Sbjct: 200 RMCINSVGNGDIDTPFEVSQFLRQVYDGFSFIGNTGPYEVSKKLYTLKQSLAKVENACYA 259
Query: 61 MKIR 64
+K+R
Sbjct: 260 LKVR 263
>sp|Q4R599|TSNAX_MACFA Translin-associated protein X OS=Macaca fascicularis GN=TSNAX PE=2
SV=1
Length = 290
Score = 34.3 bits (77), Expect = 0.26, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 2 RYVVNQVLAGNYDCPRKVLRFLTDLHAAFRMLNLRNDF-LRKKFDSLKYDLKRVEEVYYD 60
R +N V G+ D P +V +FL ++ F + + + KK +LK L +VE Y
Sbjct: 200 RMCINSVGNGDIDTPFEVSQFLRQVYDGFSFIGNTGPYEVSKKLYTLKQSLAKVENACYA 259
Query: 61 MKIR 64
+K+R
Sbjct: 260 LKVR 263
>sp|Q99598|TSNAX_HUMAN Translin-associated protein X OS=Homo sapiens GN=TSNAX PE=1 SV=1
Length = 290
Score = 34.3 bits (77), Expect = 0.26, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 2 RYVVNQVLAGNYDCPRKVLRFLTDLHAAFRMLNLRNDF-LRKKFDSLKYDLKRVEEVYYD 60
R +N V G+ D P +V +FL ++ F + + + KK +LK L +VE Y
Sbjct: 200 RMCINSVGNGDIDTPFEVSQFLRQVYDGFSFIGNTGPYEVSKKLYTLKQSLAKVENACYA 259
Query: 61 MKIR 64
+K+R
Sbjct: 260 LKVR 263
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.139 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,757,072
Number of Sequences: 539616
Number of extensions: 956688
Number of successful extensions: 2650
Number of sequences better than 100.0: 12
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 2638
Number of HSP's gapped (non-prelim): 12
length of query: 81
length of database: 191,569,459
effective HSP length: 52
effective length of query: 29
effective length of database: 163,509,427
effective search space: 4741773383
effective search space used: 4741773383
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)