BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047969
(625 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 188 bits (478), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 121/295 (41%), Positives = 171/295 (57%), Gaps = 11/295 (3%)
Query: 269 VPIFSYS----DLAEATNDFSREKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQ 324
VP SY DL EATN+F + +G G FG VY G L+DG +VA+KR + + +E+
Sbjct: 22 VPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEE 81
Query: 325 FMNEVEILTRLRHKNLVSLFG-CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWP 383
F E+E L+ RH +LVSL G C R ++L+Y+++ NG + L+G ++W
Sbjct: 82 FETEIETLSFCRHPHLVSLIGFCDER--NEMILIYKYMENGNLKRHLYGSDLPTMSMSWE 139
Query: 384 IRMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRL-FPLDVTHVST 442
R+ I I A L YLH IIHRDVK+ NILLD NF K+ DFG+S+ LD TH+
Sbjct: 140 QRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXX 199
Query: 443 APQGTPGYVDPEYHQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHRHEINLANLAINK 502
+GT GY+DPEY +LT+KSDVYSFGVVL E++ + A+ + R +NLA A+
Sbjct: 200 VVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVES 259
Query: 503 IQKCAFDELIDPCLGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLAELQ 557
++++DP L + E R + A CL + E RPSM +VL +L+
Sbjct: 260 HNNGQLEQIVDPNLADKIRPESLR---KFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 186 bits (471), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 120/295 (40%), Positives = 170/295 (57%), Gaps = 11/295 (3%)
Query: 269 VPIFSYS----DLAEATNDFSREKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQ 324
VP SY DL EATN+F + +G G FG VY G L+DG +VA+KR + + +E+
Sbjct: 22 VPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEE 81
Query: 325 FMNEVEILTRLRHKNLVSLFG-CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWP 383
F E+E L+ RH +LVSL G C R ++L+Y+++ NG + L+G ++W
Sbjct: 82 FETEIETLSFCRHPHLVSLIGFCDER--NEMILIYKYMENGNLKRHLYGSDLPTMSMSWE 139
Query: 384 IRMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRL-FPLDVTHVST 442
R+ I I A L YLH IIHRDVK+ NILLD NF K+ DFG+S+ L TH+
Sbjct: 140 QRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXX 199
Query: 443 APQGTPGYVDPEYHQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHRHEINLANLAINK 502
+GT GY+DPEY +LT+KSDVYSFGVVL E++ + A+ + R +NLA A+
Sbjct: 200 VVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVES 259
Query: 503 IQKCAFDELIDPCLGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLAELQ 557
++++DP L + E R + A CL + E RPSM +VL +L+
Sbjct: 260 HNNGQLEQIVDPNLADKIRPESLR---KFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 122/312 (39%), Positives = 175/312 (56%), Gaps = 18/312 (5%)
Query: 272 FSYSDLAEATNDFSREKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVE-QFMNEVE 330
FS +L A+++FS + LG GGFG VY G+L DG VAVKRL + + E QF EVE
Sbjct: 28 FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVE 87
Query: 331 ILTRLRHKNLVSLFG-CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIA 389
+++ H+NL+ L G C + + LLVY ++ANG+VA L L WP R IA
Sbjct: 88 MISMAVHRNLLRLRGFCMTPTER--LLVYPYMANGSVASCLRERPESQPPLDWPKRQRIA 145
Query: 390 IETASALAYLHAS---DIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQG 446
+ +A LAYLH IIHRDVK NILLD F V DFGL++L HV A +G
Sbjct: 146 LGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRG 205
Query: 447 TPGYVDPEYHQCYQLTDKSDVYSFGVVLIELISSMPAVDMNR--HRHEINLANLAINKIQ 504
T G++ PEY + ++K+DV+ +GV+L+ELI+ A D+ R + ++ L + ++
Sbjct: 206 TIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLK 265
Query: 505 KCAFDELIDPCL-GFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLAELQRIKSGK 563
+ + L+D L G DEEV+++ ++A LC Q + RP M EV+ R+ G
Sbjct: 266 EKKLEALVDVDLQGNYKDEEVEQLI----QVALLCTQSSPMERPKMSEVV----RMLEGD 317
Query: 564 SKFEIHEEKQDD 575
E EE Q +
Sbjct: 318 GLAERWEEWQKE 329
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 120/312 (38%), Positives = 173/312 (55%), Gaps = 18/312 (5%)
Query: 272 FSYSDLAEATNDFSREKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVE-QFMNEVE 330
FS +L A+++F + LG GGFG VY G+L DG VAVKRL + + E QF EVE
Sbjct: 20 FSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVE 79
Query: 331 ILTRLRHKNLVSLFG-CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIA 389
+++ H+NL+ L G C + + LLVY ++ANG+VA L L WP R IA
Sbjct: 80 MISMAVHRNLLRLRGFCMTPTER--LLVYPYMANGSVASCLRERPESQPPLDWPKRQRIA 137
Query: 390 IETASALAYLHAS---DIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQG 446
+ +A LAYLH IIHRDVK NILLD F V DFGL++L HV A +G
Sbjct: 138 LGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRG 197
Query: 447 TPGYVDPEYHQCYQLTDKSDVYSFGVVLIELISSMPAVDMNR--HRHEINLANLAINKIQ 504
G++ PEY + ++K+DV+ +GV+L+ELI+ A D+ R + ++ L + ++
Sbjct: 198 XIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLK 257
Query: 505 KCAFDELIDPCL-GFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLAELQRIKSGK 563
+ + L+D L G DEEV+++ ++A LC Q + RP M EV+ R+ G
Sbjct: 258 EKKLEALVDVDLQGNYKDEEVEQLI----QVALLCTQSSPMERPKMSEVV----RMLEGD 309
Query: 564 SKFEIHEEKQDD 575
E EE Q +
Sbjct: 310 GLAERWEEWQKE 321
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/303 (33%), Positives = 166/303 (54%), Gaps = 24/303 (7%)
Query: 272 FSYSDLAEATNDFSRE------KELGDGGFGTVYYGKLKDGREVAVKRL---YDNNYRRV 322
FS+ +L TN+F ++G+GGFG VY G + + VAVK+L D +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEEL 73
Query: 323 -EQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGL-- 379
+QF E++++ + +H+NLV L G +S L LVY ++ NG++ D+L G
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSD-GDDLCLVYVYMPNGSLLDRL---SCLDGTPP 129
Query: 380 LTWPIRMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLF-PLDVT 438
L+W +R IA A+ + +LH + IHRD+K+ NILLD F K++DFGL+R T
Sbjct: 130 LSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQT 189
Query: 439 HVSTAPQGTPGYVDPEYHQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHRHEINLANL 498
+ + GT Y+ PE + ++T KSD+YSFGVVL+E+I+ +PAVD +R ++ L
Sbjct: 190 VMXSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREP-QLLLDIK 247
Query: 499 AINKIQKCAFDELIDPCLGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLAELQR 558
+ ++ ++ ID + V+ M + ++ CL + K RP +++V LQ
Sbjct: 248 EEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQ----CLHEKKNKRPDIKKVQQLLQE 303
Query: 559 IKS 561
+ +
Sbjct: 304 MTA 306
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/303 (33%), Positives = 165/303 (54%), Gaps = 24/303 (7%)
Query: 272 FSYSDLAEATNDFSRE------KELGDGGFGTVYYGKLKDGREVAVKRL---YDNNYRRV 322
FS+ +L TN+F ++G+GGFG VY G + + VAVK+L D +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEEL 73
Query: 323 -EQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGL-- 379
+QF E++++ + +H+NLV L G +S L LVY ++ NG++ D+L G
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSD-GDDLCLVYVYMPNGSLLDRL---SCLDGTPP 129
Query: 380 LTWPIRMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLF-PLDVT 438
L+W +R IA A+ + +LH + IHRD+K+ NILLD F K++DFGL+R T
Sbjct: 130 LSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQT 189
Query: 439 HVSTAPQGTPGYVDPEYHQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHRHEINLANL 498
+ GT Y+ PE + ++T KSD+YSFGVVL+E+I+ +PAVD +R ++ L
Sbjct: 190 VMXXRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREP-QLLLDIK 247
Query: 499 AINKIQKCAFDELIDPCLGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLAELQR 558
+ ++ ++ ID + V+ M + ++ CL + K RP +++V LQ
Sbjct: 248 EEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQ----CLHEKKNKRPDIKKVQQLLQE 303
Query: 559 IKS 561
+ +
Sbjct: 304 MTA 306
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/305 (33%), Positives = 165/305 (54%), Gaps = 28/305 (9%)
Query: 272 FSYSDLAEATNDFSRE------KELGDGGFGTVYYGKLKDGREVAVKRL---YDNNYRRV 322
FS+ +L TN+F ++G+GGFG VY G + + VAVK+L D +
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEEL 67
Query: 323 -EQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGL-- 379
+QF E++++ + +H+NLV L G +S L LVY ++ NG++ D+L G
Sbjct: 68 KQQFDQEIKVMAKCQHENLVELLGFSSD-GDDLCLVYVYMPNGSLLDRL---SCLDGTPP 123
Query: 380 LTWPIRMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRL---FPLD 436
L+W +R IA A+ + +LH + IHRD+K+ NILLD F K++DFGL+R F
Sbjct: 124 LSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQX 183
Query: 437 VTHVSTAPQGTPGYVDPEYHQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHRHEINLA 496
V GT Y+ PE + ++T KSD+YSFGVVL+E+I+ +PAVD +R ++ L
Sbjct: 184 VMXXRIV--GTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREP-QLLLD 239
Query: 497 NLAINKIQKCAFDELIDPCLGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLAEL 556
+ ++ ++ ID + V+ M + ++ CL + K RP +++V L
Sbjct: 240 IKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQ----CLHEKKNKRPDIKKVQQLL 295
Query: 557 QRIKS 561
Q + +
Sbjct: 296 QEMTA 300
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 131 bits (330), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 102/299 (34%), Positives = 155/299 (51%), Gaps = 24/299 (8%)
Query: 272 FSYSDLAEATNDFSRE------KELGDGGFGTVYYGKLKDGREVAVKRLYD----NNYRR 321
FS+ +L TN+F + G+GGFG VY G + + VAVK+L
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEEL 64
Query: 322 VEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGL-- 379
+QF E+++ + +H+NLV L G +S L LVY + NG++ D+L G
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSD-GDDLCLVYVYXPNGSLLDRL---SCLDGTPP 120
Query: 380 LTWPIRMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTH 439
L+W R IA A+ + +LH + IHRD+K+ NILLD F K++DFGL+R
Sbjct: 121 LSWHXRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQX 180
Query: 440 VSTAP-QGTPGYVDPEYHQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHRHEINLANL 498
V + GT Y PE + ++T KSD+YSFGVVL+E+I+ +PAVD +R ++ L
Sbjct: 181 VXXSRIVGTTAYXAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREP-QLLLDIK 238
Query: 499 AINKIQKCAFDELIDPCLGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLAELQ 557
+ ++ ++ ID ++D SVA CL + K RP +++V LQ
Sbjct: 239 EEIEDEEKTIEDYIDKKXN-DADSTSVEAXYSVAS---QCLHEKKNKRPDIKKVQQLLQ 293
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 118/201 (58%), Gaps = 8/201 (3%)
Query: 283 DFSREKELGDGGFGTVYYGKLKDGREVAVKRLYDNNY--RRVEQFMNEVEILTRLRHKNL 340
D + ++++G G FGTV+ + G +VAVK L + ++ RV +F+ EV I+ RLRH N+
Sbjct: 38 DLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNI 96
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
V G ++ L +V E+++ G++ LH A+ L R+++A + A + YLH
Sbjct: 97 VLFMGAVTQ-PPNLSIVTEYLSRGSLYRLLHKSGAREQLDE-RRRLSMAYDVAKGMNYLH 154
Query: 401 ASD--IIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQC 458
+ I+HRD+K+ N+L+D + VKV DFGLSRL S GTP ++ PE +
Sbjct: 155 NRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRL-KASXFLXSKXAAGTPEWMAPEVLRD 213
Query: 459 YQLTDKSDVYSFGVVLIELIS 479
+KSDVYSFGV+L EL +
Sbjct: 214 EPSNEKSDVYSFGVILWELAT 234
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 75/201 (37%), Positives = 119/201 (59%), Gaps = 8/201 (3%)
Query: 283 DFSREKELGDGGFGTVYYGKLKDGREVAVKRLYDNNY--RRVEQFMNEVEILTRLRHKNL 340
D + ++++G G FGTV+ + G +VAVK L + ++ RV +F+ EV I+ RLRH N+
Sbjct: 38 DLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNI 96
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
V G ++ L +V E+++ G++ LH A+ L R+++A + A + YLH
Sbjct: 97 VLFMGAVTQ-PPNLSIVTEYLSRGSLYRLLHKSGAREQLDE-RRRLSMAYDVAKGMNYLH 154
Query: 401 ASD--IIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQC 458
+ I+HR++K+ N+L+D + VKV DFGLSRL +A GTP ++ PE +
Sbjct: 155 NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSA-AGTPEWMAPEVLRD 213
Query: 459 YQLTDKSDVYSFGVVLIELIS 479
+KSDVYSFGV+L EL +
Sbjct: 214 EPSNEKSDVYSFGVILWELAT 234
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 108/196 (55%), Gaps = 11/196 (5%)
Query: 287 EKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
E +LG G FG V+ G VA+K L N E F+ E +++ +LRH+ LV L+
Sbjct: 190 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMS-PEAFLQEAQVMKKLRHEKLVQLYAV 248
Query: 347 TSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDIIH 406
S + + +V E+++ G++ D L G+ K+ L P +++A + AS +AY+ + +H
Sbjct: 249 VS--EEPIYIVTEYMSKGSLLDFLKGEMGKY--LRLPQLVDMAAQIASGMAYVERMNYVH 304
Query: 407 RDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP---GYVDPEYHQCYQLTD 463
RD++ NIL+ N KVADFGL RL + TA QG + PE + T
Sbjct: 305 RDLRAANILVGENLVCKVADFGLGRLIE---DNEYTARQGAKFPIKWTAPEAALYGRFTI 361
Query: 464 KSDVYSFGVVLIELIS 479
KSDV+SFG++L EL +
Sbjct: 362 KSDVWSFGILLTELTT 377
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 108/196 (55%), Gaps = 11/196 (5%)
Query: 287 EKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
E +LG G FG V+ G VA+K L E F+ E +++ +LRH+ LV L+
Sbjct: 13 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAV 71
Query: 347 TSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDIIH 406
S + + +V E+++ G++ D L G+ K+ L P +++A + AS +AY+ + +H
Sbjct: 72 VS--EEPIXIVTEYMSKGSLLDFLKGETGKY--LRLPQLVDMAAQIASGMAYVERMNYVH 127
Query: 407 RDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP---GYVDPEYHQCYQLTD 463
RD++ NIL+ N KVADFGL+RL + TA QG + PE + T
Sbjct: 128 RDLRAANILVGENLVCKVADFGLARLIE---DNEXTARQGAKFPIKWTAPEAALYGRFTI 184
Query: 464 KSDVYSFGVVLIELIS 479
KSDV+SFG++L EL +
Sbjct: 185 KSDVWSFGILLTELTT 200
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 108/196 (55%), Gaps = 11/196 (5%)
Query: 287 EKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
E +LG G FG V+ G VA+K L E F+ E +++ +LRH+ LV L+
Sbjct: 23 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 347 TSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDIIH 406
S + + +V E+++ G++ D L G+ K+ L P +++A + AS +AY+ + +H
Sbjct: 82 VS--EEPIYIVIEYMSKGSLLDFLKGEMGKY--LRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 407 RDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP---GYVDPEYHQCYQLTD 463
RD++ NIL+ N KVADFGL+RL + TA QG + PE + T
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIE---DNEXTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 464 KSDVYSFGVVLIELIS 479
KSDV+SFG++L EL +
Sbjct: 195 KSDVWSFGILLTELTT 210
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 108/196 (55%), Gaps = 11/196 (5%)
Query: 287 EKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
E +LG G FG V+ G VA+K L E F+ E +++ +LRH+ LV L+
Sbjct: 16 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAV 74
Query: 347 TSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDIIH 406
S + + +V E+++ G++ D L G+ K+ L P +++A + AS +AY+ + +H
Sbjct: 75 VS--EEPIYIVTEYMSKGSLLDFLKGETGKY--LRLPQLVDMAAQIASGMAYVERMNYVH 130
Query: 407 RDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP---GYVDPEYHQCYQLTD 463
RD++ NIL+ N KVADFGL+RL + TA QG + PE + T
Sbjct: 131 RDLRAANILVGENLVCKVADFGLARLIE---DNEYTARQGAKFPIKWTAPEAALYGRFTI 187
Query: 464 KSDVYSFGVVLIELIS 479
KSDV+SFG++L EL +
Sbjct: 188 KSDVWSFGILLTELTT 203
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 108/196 (55%), Gaps = 11/196 (5%)
Query: 287 EKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
E +LG G FG V+ G VA+K L E F+ E +++ +LRH+ LV L+
Sbjct: 14 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAV 72
Query: 347 TSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDIIH 406
S + + +V E+++ G++ D L G+ K+ L P +++A + AS +AY+ + +H
Sbjct: 73 VS--EEPIYIVTEYMSKGSLLDFLKGEMGKY--LRLPQLVDMAAQIASGMAYVERMNYVH 128
Query: 407 RDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP---GYVDPEYHQCYQLTD 463
RD++ NIL+ N KVADFGL+RL + TA QG + PE + T
Sbjct: 129 RDLRAANILVGENLVCKVADFGLARLIE---DNEYTARQGAKFPIKWTAPEAALYGRFTI 185
Query: 464 KSDVYSFGVVLIELIS 479
KSDV+SFG++L EL +
Sbjct: 186 KSDVWSFGILLTELTT 201
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 108/196 (55%), Gaps = 11/196 (5%)
Query: 287 EKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
E +LG G FG V+ G VA+K L E F+ E +++ +LRH+ LV L+
Sbjct: 23 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 347 TSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDIIH 406
S + + +V E+++ G++ D L G+ K+ L P +++A + AS +AY+ + +H
Sbjct: 82 VS--EEPIYIVIEYMSKGSLLDFLKGEMGKY--LRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 407 RDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP---GYVDPEYHQCYQLTD 463
RD++ NIL+ N KVADFGL+RL + TA QG + PE + T
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIE---DNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 464 KSDVYSFGVVLIELIS 479
KSDV+SFG++L EL +
Sbjct: 195 KSDVWSFGILLTELTT 210
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 108/196 (55%), Gaps = 11/196 (5%)
Query: 287 EKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
E +LG G FG V+ G VA+K L E F+ E +++ +LRH+ LV L+
Sbjct: 12 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAV 70
Query: 347 TSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDIIH 406
S + + +V E+++ G++ D L G+ K+ L P +++A + AS +AY+ + +H
Sbjct: 71 VS--EEPIYIVTEYMSKGSLLDFLKGEMGKY--LRLPQLVDMAAQIASGMAYVERMNYVH 126
Query: 407 RDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP---GYVDPEYHQCYQLTD 463
RD++ NIL+ N KVADFGL+RL + TA QG + PE + T
Sbjct: 127 RDLRAANILVGENLVCKVADFGLARLIE---DNEYTARQGAKFPIKWTAPEAALYGRFTI 183
Query: 464 KSDVYSFGVVLIELIS 479
KSDV+SFG++L EL +
Sbjct: 184 KSDVWSFGILLTELTT 199
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 108/196 (55%), Gaps = 11/196 (5%)
Query: 287 EKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
E +LG G FG V+ G VA+K L E F+ E +++ +LRH+ LV L+
Sbjct: 23 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 347 TSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDIIH 406
S + + +V E+++ G++ D L G+ K+ L P +++A + AS +AY+ + +H
Sbjct: 82 VS--EEPIYIVTEYMSKGSLLDFLKGEMGKY--LRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 407 RDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP---GYVDPEYHQCYQLTD 463
RD++ NIL+ N KVADFGL+RL + TA QG + PE + T
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIE---DNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 464 KSDVYSFGVVLIELIS 479
KSDV+SFG++L EL +
Sbjct: 195 KSDVWSFGILLTELTT 210
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 108/196 (55%), Gaps = 11/196 (5%)
Query: 287 EKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
E +LG G FG V+ G VA+K L E F+ E +++ +LRH+ LV L+
Sbjct: 189 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAV 247
Query: 347 TSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDIIH 406
S + + +V E+++ G++ D L G+ K+ L P +++A + AS +AY+ + +H
Sbjct: 248 VS--EEPIYIVTEYMSKGSLLDFLKGETGKY--LRLPQLVDMAAQIASGMAYVERMNYVH 303
Query: 407 RDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP---GYVDPEYHQCYQLTD 463
RD++ NIL+ N KVADFGL+RL + TA QG + PE + T
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLIE---DNEYTARQGAKFPIKWTAPEAALYGRFTI 360
Query: 464 KSDVYSFGVVLIELIS 479
KSDV+SFG++L EL +
Sbjct: 361 KSDVWSFGILLTELTT 376
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 108/196 (55%), Gaps = 11/196 (5%)
Query: 287 EKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
E +LG G FG V+ G VA+K L E F+ E +++ +LRH+ LV L+
Sbjct: 189 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAV 247
Query: 347 TSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDIIH 406
S + + +V E+++ G++ D L G+ K+ L P +++A + AS +AY+ + +H
Sbjct: 248 VS--EEPIYIVTEYMSKGSLLDFLKGETGKY--LRLPQLVDMAAQIASGMAYVERMNYVH 303
Query: 407 RDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP---GYVDPEYHQCYQLTD 463
RD++ NIL+ N KVADFGL+RL + TA QG + PE + T
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLIE---DNEYTARQGAKFPIKWTAPEAALYGRFTI 360
Query: 464 KSDVYSFGVVLIELIS 479
KSDV+SFG++L EL +
Sbjct: 361 KSDVWSFGILLTELTT 376
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 108/196 (55%), Gaps = 11/196 (5%)
Query: 287 EKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
E +LG G FG V+ G VA+K L E F+ E +++ +LRH+ LV L+
Sbjct: 272 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAV 330
Query: 347 TSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDIIH 406
S + + +V E+++ G++ D L G+ K+ L P +++A + AS +AY+ + +H
Sbjct: 331 VSE--EPIYIVTEYMSKGSLLDFLKGETGKY--LRLPQLVDMAAQIASGMAYVERMNYVH 386
Query: 407 RDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP---GYVDPEYHQCYQLTD 463
RD++ NIL+ N KVADFGL+RL + TA QG + PE + T
Sbjct: 387 RDLRAANILVGENLVCKVADFGLARLIE---DNEYTARQGAKFPIKWTAPEAALYGRFTI 443
Query: 464 KSDVYSFGVVLIELIS 479
KSDV+SFG++L EL +
Sbjct: 444 KSDVWSFGILLTELTT 459
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 108/196 (55%), Gaps = 11/196 (5%)
Query: 287 EKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
E +LG G FG V+ G VA+K L E F+ E +++ +LRH+ LV L+
Sbjct: 23 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 347 TSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDIIH 406
S + + +V E+++ G++ D L G+ K+ L P +++A + AS +AY+ + +H
Sbjct: 82 VS--EEPIYIVCEYMSKGSLLDFLKGEMGKY--LRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 407 RDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP---GYVDPEYHQCYQLTD 463
RD++ NIL+ N KVADFGL+RL + TA QG + PE + T
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIE---DNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 464 KSDVYSFGVVLIELIS 479
KSDV+SFG++L EL +
Sbjct: 195 KSDVWSFGILLTELTT 210
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 107/196 (54%), Gaps = 11/196 (5%)
Query: 287 EKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
E +LG G FG V+ G VA+K L E F+ E +++ +LRH+ LV L+
Sbjct: 23 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 347 TSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDIIH 406
S + + +V E+++ G + D L G+ K+ L P +++A + AS +AY+ + +H
Sbjct: 82 VS--EEPIYIVMEYMSKGCLLDFLKGEMGKY--LRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 407 RDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP---GYVDPEYHQCYQLTD 463
RD++ NIL+ N KVADFGL+RL + TA QG + PE + T
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIE---DNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 464 KSDVYSFGVVLIELIS 479
KSDV+SFG++L EL +
Sbjct: 195 KSDVWSFGILLTELTT 210
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 108/196 (55%), Gaps = 11/196 (5%)
Query: 287 EKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
E +LG G FG V+ G VA+K L E F+ E +++ +LRH+ LV L+
Sbjct: 189 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAV 247
Query: 347 TSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDIIH 406
S + + +V E+++ G++ D L G+ K+ L P +++A + AS +AY+ + +H
Sbjct: 248 VS--EEPIYIVGEYMSKGSLLDFLKGETGKY--LRLPQLVDMAAQIASGMAYVERMNYVH 303
Query: 407 RDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP---GYVDPEYHQCYQLTD 463
RD++ NIL+ N KVADFGL+RL + TA QG + PE + T
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLIE---DNEYTARQGAKFPIKWTAPEAALYGRFTI 360
Query: 464 KSDVYSFGVVLIELIS 479
KSDV+SFG++L EL +
Sbjct: 361 KSDVWSFGILLTELTT 376
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 108/196 (55%), Gaps = 11/196 (5%)
Query: 287 EKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
E +LG G FG V+ G VA+K L E F+ E +++ ++RH+ LV L+
Sbjct: 23 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKIRHEKLVQLYAV 81
Query: 347 TSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDIIH 406
S + + +V E+++ G++ D L G+ K+ L P +++A + AS +AY+ + +H
Sbjct: 82 VS--EEPIYIVTEYMSKGSLLDFLKGEMGKY--LRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 407 RDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP---GYVDPEYHQCYQLTD 463
RD++ NIL+ N KVADFGL+RL + TA QG + PE + T
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIE---DNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 464 KSDVYSFGVVLIELIS 479
KSDV+SFG++L EL +
Sbjct: 195 KSDVWSFGILLTELTT 210
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 107/196 (54%), Gaps = 11/196 (5%)
Query: 287 EKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
E +LG G FG V+ G VA+K L E F+ E +++ +LRH+ LV L+
Sbjct: 23 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 347 TSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDIIH 406
S + + +V E+++ G + D L G+ K+ L P +++A + AS +AY+ + +H
Sbjct: 82 VS--EEPIYIVTEYMSKGCLLDFLKGEMGKY--LRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 407 RDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP---GYVDPEYHQCYQLTD 463
RD++ NIL+ N KVADFGL+RL + TA QG + PE + T
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIE---DNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 464 KSDVYSFGVVLIELIS 479
KSDV+SFG++L EL +
Sbjct: 195 KSDVWSFGILLTELTT 210
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 107/196 (54%), Gaps = 11/196 (5%)
Query: 287 EKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
E +LG G FG V+ G VA+K L E F+ E +++ +LRH+ LV L+
Sbjct: 23 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 347 TSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDIIH 406
S + + +V E+++ G++ D L G+ K+ L P +++A + AS +AY+ + +H
Sbjct: 82 VS--EEPIYIVTEYMSKGSLLDFLKGEMGKY--LRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 407 RDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP---GYVDPEYHQCYQLTD 463
RD+ NIL+ N KVADFGL+RL + TA QG + PE + T
Sbjct: 138 RDLAAANILVGENLVCKVADFGLARLIE---DNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 464 KSDVYSFGVVLIELIS 479
KSDV+SFG++L EL +
Sbjct: 195 KSDVWSFGILLTELTT 210
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 107/196 (54%), Gaps = 11/196 (5%)
Query: 287 EKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
E +LG G FG V+ G VA+K L E F+ E +++ +LRH+ LV L+
Sbjct: 20 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAV 78
Query: 347 TSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDIIH 406
S + + +V E++ G++ D L G+ K+ L P ++++ + AS +AY+ + +H
Sbjct: 79 VS--EEPIYIVTEYMNKGSLLDFLKGETGKY--LRLPQLVDMSAQIASGMAYVERMNYVH 134
Query: 407 RDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP---GYVDPEYHQCYQLTD 463
RD++ NIL+ N KVADFGL+RL + TA QG + PE + T
Sbjct: 135 RDLRAANILVGENLVCKVADFGLARLIE---DNEWTARQGAKFPIKWTAPEAALYGRFTI 191
Query: 464 KSDVYSFGVVLIELIS 479
KSDV+SFG++L EL +
Sbjct: 192 KSDVWSFGILLTELTT 207
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 107/196 (54%), Gaps = 11/196 (5%)
Query: 287 EKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
E +LG G FG V+ G VA+K L E F+ E +++ +LRH+ LV L+
Sbjct: 20 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAV 78
Query: 347 TSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDIIH 406
S + + +V E++ G++ D L G+ K+ L P ++++ + AS +AY+ + +H
Sbjct: 79 VS--EEPIYIVTEYMNKGSLLDFLKGETGKY--LRLPQLVDMSAQIASGMAYVERMNYVH 134
Query: 407 RDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP---GYVDPEYHQCYQLTD 463
RD++ NIL+ N KVADFGL+RL + TA QG + PE + T
Sbjct: 135 RDLRAANILVGENLVCKVADFGLARLIE---DNEYTARQGAKFPIKWTAPEAALYGRFTI 191
Query: 464 KSDVYSFGVVLIELIS 479
KSDV+SFG++L EL +
Sbjct: 192 KSDVWSFGILLTELTT 207
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 134/275 (48%), Gaps = 25/275 (9%)
Query: 288 KELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCT 347
+E+G G FG V+ G + +VA+K + + E F+ E E++ +L H LV L+G
Sbjct: 13 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 348 SRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDIIHR 407
+ + LV+EF+ +G ++D L R + GL + + ++ +AYL + +IHR
Sbjct: 72 LEQAP-ICLVFEFMEHGCLSDYL---RTQRGLFAAETLLGMCLDVCEGMAYLEEASVIHR 127
Query: 408 DVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP-GYVDPEYHQCYQLTDKSD 466
D+ N L+ N +KV+DFG++R F LD + S+ P + PE + + KSD
Sbjct: 128 DLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 186
Query: 467 VYSFGVVLIELISSMPAVDMNRHRHEINLANLAINKIQKCAFDELIDPCLGFESDEEVKR 526
V+SFGV++ E+ S NR E+ + D GF + +
Sbjct: 187 VWSFGVLMWEVFSEGKIPYENRSNSEV-----------------VEDISTGFRLYKP-RL 228
Query: 527 MTTSVAELAFLCLQQNKELRPSMEEVLAELQRIKS 561
+T V ++ C ++ E RP+ +L +L I +
Sbjct: 229 ASTHVYQIMNHCWKERPEDRPAFSRLLRQLAAIAA 263
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 133/273 (48%), Gaps = 25/273 (9%)
Query: 288 KELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCT 347
+E+G G FG V+ G + +VA+K + + E F+ E E++ +L H LV L+G
Sbjct: 13 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 348 SRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDIIHR 407
+ + LV+EF+ +G ++D L R + GL + + ++ +AYL + +IHR
Sbjct: 72 LEQAP-ICLVFEFMEHGCLSDYL---RTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHR 127
Query: 408 DVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP-GYVDPEYHQCYQLTDKSD 466
D+ N L+ N +KV+DFG++R F LD + S+ P + PE + + KSD
Sbjct: 128 DLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 186
Query: 467 VYSFGVVLIELISSMPAVDMNRHRHEINLANLAINKIQKCAFDELIDPCLGFESDEEVKR 526
V+SFGV++ E+ S NR E+ + D GF + +
Sbjct: 187 VWSFGVLMWEVFSEGKIPYENRSNSEV-----------------VEDISTGFRLYKP-RL 228
Query: 527 MTTSVAELAFLCLQQNKELRPSMEEVLAELQRI 559
+T V ++ C ++ E RP+ +L +L I
Sbjct: 229 ASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEI 261
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 133/280 (47%), Gaps = 39/280 (13%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNL 340
D + + +LG G +G VY G K VAVK L ++ VE+F+ E ++ ++H NL
Sbjct: 14 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNL 72
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQLHG-DRAKHGLLTWPIRMNIAIETASALAYL 399
V L G +R ++ EF+ G + D L +R + + + + +A + +SA+ YL
Sbjct: 73 VQLLGVCTR-EPPFYIITEFMTYGNLLDYLRECNRQEVNAV---VLLYMATQISSAMEYL 128
Query: 400 HASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP---GYVDPEYH 456
+ IHRD+ N L+ N VKVADFGLSRL D TAP G + PE
Sbjct: 129 EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY---TAPAGAKFPIKWTAPESL 185
Query: 457 QCYQLTDKSDVYSFGVVLIEL----ISSMPAVDMNRHRHEINLANLAINKIQKCAFDELI 512
+ + KSDV++FGV+L E+ +S P +D+++ +E+ + + + + C
Sbjct: 186 AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRMERPEGCP----- 239
Query: 513 DPCLGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEV 552
V EL C Q N RPS E+
Sbjct: 240 ----------------EKVYELMRACWQWNPSDRPSFAEI 263
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 133/289 (46%), Gaps = 33/289 (11%)
Query: 270 PIFSYSDLAEATNDFSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNNYRRVEQFMNE 328
P +Y D + + +LG G +G VY G K VAVK L ++ VE+F+ E
Sbjct: 2 PSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKE 60
Query: 329 VEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHG-DRAKHGLLTWPIRMN 387
++ ++H NLV L G +R ++ EF+ G + D L +R + + + +
Sbjct: 61 AAVMKEIKHPNLVQLLGVCTR-EPPFYIIIEFMTYGNLLDYLRECNRQEVNAV---VLLY 116
Query: 388 IAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGT 447
+A + +SA+ YL + IHRD+ N L+ N VKVADFGLSRL D +
Sbjct: 117 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFP 176
Query: 448 PGYVDPEYHQCYQLTDKSDVYSFGVVLIEL----ISSMPAVDMNRHRHEINLANLAINKI 503
+ PE + + KSDV++FGV+L E+ +S P +D+++ +E+ + + +
Sbjct: 177 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRMERP 235
Query: 504 QKCAFDELIDPCLGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEV 552
+ C V EL C Q N RPS E+
Sbjct: 236 EGCP---------------------EKVYELMRACWQWNPSDRPSFAEI 263
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 133/273 (48%), Gaps = 25/273 (9%)
Query: 288 KELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCT 347
+E+G G FG V+ G + +VA+K + + E F+ E E++ +L H LV L+G
Sbjct: 16 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVC 74
Query: 348 SRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDIIHR 407
+ + LV+EF+ +G ++D L R + GL + + ++ +AYL + +IHR
Sbjct: 75 LEQAP-ICLVFEFMEHGCLSDYL---RTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHR 130
Query: 408 DVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP-GYVDPEYHQCYQLTDKSD 466
D+ N L+ N +KV+DFG++R F LD + S+ P + PE + + KSD
Sbjct: 131 DLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 189
Query: 467 VYSFGVVLIELISSMPAVDMNRHRHEINLANLAINKIQKCAFDELIDPCLGFESDEEVKR 526
V+SFGV++ E+ S NR E+ + D GF + +
Sbjct: 190 VWSFGVLMWEVFSEGKIPYENRSNSEV-----------------VEDISTGFRLYKP-RL 231
Query: 527 MTTSVAELAFLCLQQNKELRPSMEEVLAELQRI 559
+T V ++ C ++ E RP+ +L +L I
Sbjct: 232 ASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEI 264
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 133/273 (48%), Gaps = 25/273 (9%)
Query: 288 KELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCT 347
+E+G G FG V+ G + +VA+K + + E F+ E E++ +L H LV L+G
Sbjct: 11 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVC 69
Query: 348 SRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDIIHR 407
+ + LV+EF+ +G ++D L R + GL + + ++ +AYL + +IHR
Sbjct: 70 LEQAP-ICLVFEFMEHGCLSDYL---RTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHR 125
Query: 408 DVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP-GYVDPEYHQCYQLTDKSD 466
D+ N L+ N +KV+DFG++R F LD + S+ P + PE + + KSD
Sbjct: 126 DLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 184
Query: 467 VYSFGVVLIELISSMPAVDMNRHRHEINLANLAINKIQKCAFDELIDPCLGFESDEEVKR 526
V+SFGV++ E+ S NR E+ + D GF + +
Sbjct: 185 VWSFGVLMWEVFSEGKIPYENRSNSEV-----------------VEDISTGFRLYKP-RL 226
Query: 527 MTTSVAELAFLCLQQNKELRPSMEEVLAELQRI 559
+T V ++ C ++ E RP+ +L +L I
Sbjct: 227 ASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEI 259
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 137/280 (48%), Gaps = 31/280 (11%)
Query: 288 KELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCT 347
+ +G G FGTVY GK V + + ++++ F NEV +L + RH N++ G +
Sbjct: 18 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 77
Query: 348 SRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDIIHR 407
++ L +V ++ ++ LH K + ++IA +TA + YLHA IIHR
Sbjct: 78 TKPQ--LAIVTQWCEGSSLYHHLHASETKFEMKK---LIDIARQTARGMDYLHAKSIIHR 132
Query: 408 DVKTNNILLDSNFCVKVADFGLSRLFP-LDVTHVSTAPQGTPGYVDPEYHQCYQLTD--- 463
D+K+NNI L + VK+ DFGL+ + +H G+ ++ PE ++ D
Sbjct: 133 DLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE---VIRMQDSNP 189
Query: 464 ---KSDVYSFGVVLIELISS-MPAVDMNRHRHEINLANLAINKIQKCAFDELIDPCLGFE 519
+SDVY+FG+VL EL++ +P ++N I + + P L
Sbjct: 190 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGS-----------LSPDLSKV 238
Query: 520 SDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLAELQRI 559
KRM +AE CL++ ++ RPS +LAE++ +
Sbjct: 239 RSNCPKRMKRLMAE----CLKKKRDERPSFPRILAEIEEL 274
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 133/280 (47%), Gaps = 39/280 (13%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNL 340
D + + +LG G +G VY G K VAVK L ++ VE+F+ E ++ ++H NL
Sbjct: 15 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNL 73
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQLHG-DRAKHGLLTWPIRMNIAIETASALAYL 399
V L G +R ++ EF+ G + D L +R + + + + +A + +SA+ YL
Sbjct: 74 VQLLGVCTR-EPPFYIITEFMTYGNLLDYLRECNRQEVNAV---VLLYMATQISSAMEYL 129
Query: 400 HASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP---GYVDPEYH 456
+ IHRD+ N L+ N VKVADFGLSRL D TAP G + PE
Sbjct: 130 EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY---TAPAGAKFPIKWTAPESL 186
Query: 457 QCYQLTDKSDVYSFGVVLIEL----ISSMPAVDMNRHRHEINLANLAINKIQKCAFDELI 512
+ + KSDV++FGV+L E+ +S P +D+++ +E+ + + + + C
Sbjct: 187 AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRMERPEGCP----- 240
Query: 513 DPCLGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEV 552
V EL C Q N RPS E+
Sbjct: 241 ----------------EKVYELMRACWQWNPSDRPSFAEI 264
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 142/276 (51%), Gaps = 29/276 (10%)
Query: 288 KELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFG-C 346
KELG G FG V GK K +VAVK + + + ++F E + + +L H LV +G C
Sbjct: 14 KELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSE-DEFFQEAQTMMKLSHPKLVKFYGVC 72
Query: 347 TSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRM-NIAIETASALAYLHASDII 405
+ Y + +V E+++NG + + L HG P ++ + + +A+L + I
Sbjct: 73 SKEYP--IYIVTEYISNGCLLNYLRS----HGKGLEPSQLLEMCYDVCEGMAFLESHQFI 126
Query: 406 HRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP-GYVDPEYHQCYQLTDK 464
HRD+ N L+D + CVKV+DFG++R + LD +VS+ P + PE ++ + K
Sbjct: 127 HRDLAARNCLVDRDLCVKVSDFGMTR-YVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSK 185
Query: 465 SDVYSFGVVLIELISSMPAVDMNRHRHEINLANLAINKIQKCAFDELIDPCLGFESDEEV 524
SDV++FG+++ E+ S + + +++ + + K+ + L P L
Sbjct: 186 SDVWAFGILMWEVFS------LGKMPYDLYTNSEVVLKVSQG--HRLYRPHLA------- 230
Query: 525 KRMTTSVAELAFLCLQQNKELRPSMEEVLAELQRIK 560
+ ++ ++ + C + E RP+ +++L+ ++ ++
Sbjct: 231 ---SDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLR 263
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 130/277 (46%), Gaps = 33/277 (11%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNL 340
D + + +LG G +G VY G K VAVK L ++ VE+F+ E ++ ++H NL
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNL 76
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQLHG-DRAKHGLLTWPIRMNIAIETASALAYL 399
V L G +R ++ EF+ G + D L +R + + + + +A + +SA+ YL
Sbjct: 77 VQLLGVCTR-EPPFYIITEFMTYGNLLDYLRECNRQEVNAV---VLLYMATQISSAMEYL 132
Query: 400 HASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCY 459
+ IHRD+ N L+ N VKVADFGLSRL D + + PE
Sbjct: 133 EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYN 192
Query: 460 QLTDKSDVYSFGVVLIEL----ISSMPAVDMNRHRHEINLANLAINKIQKCAFDELIDPC 515
+ + KSDV++FGV+L E+ +S P +D+++ +E+ + + + + C
Sbjct: 193 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRMERPEGCP-------- 243
Query: 516 LGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEV 552
V EL C Q N RPS E+
Sbjct: 244 -------------EKVYELMRACWQWNPSDRPSFAEI 267
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 130/277 (46%), Gaps = 33/277 (11%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNL 340
D + + +LG G +G VY G K VAVK L ++ VE+F+ E ++ ++H NL
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNL 76
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQLHG-DRAKHGLLTWPIRMNIAIETASALAYL 399
V L G +R ++ EF+ G + D L +R + + + + +A + +SA+ YL
Sbjct: 77 VQLLGVCTR-EPPFYIIIEFMTYGNLLDYLRECNRQEVNAV---VLLYMATQISSAMEYL 132
Query: 400 HASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCY 459
+ IHRD+ N L+ N VKVADFGLSRL D + + PE
Sbjct: 133 EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYN 192
Query: 460 QLTDKSDVYSFGVVLIEL----ISSMPAVDMNRHRHEINLANLAINKIQKCAFDELIDPC 515
+ + KSDV++FGV+L E+ +S P +D+++ +E+ + + + + C
Sbjct: 193 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRMERPEGCP-------- 243
Query: 516 LGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEV 552
V EL C Q N RPS E+
Sbjct: 244 -------------EKVYELMRACWQWNPSDRPSFAEI 267
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 130/277 (46%), Gaps = 33/277 (11%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNL 340
D + + +LG G +G VY G K VAVK L ++ VE+F+ E ++ ++H NL
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNL 76
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQLHG-DRAKHGLLTWPIRMNIAIETASALAYL 399
V L G +R ++ EF+ G + D L +R + + + + +A + +SA+ YL
Sbjct: 77 VQLLGVCTR-EPPFYIITEFMTYGNLLDYLRECNRQEVNAV---VLLYMATQISSAMEYL 132
Query: 400 HASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCY 459
+ IHRD+ N L+ N VKVADFGLSRL D + + PE
Sbjct: 133 EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYN 192
Query: 460 QLTDKSDVYSFGVVLIEL----ISSMPAVDMNRHRHEINLANLAINKIQKCAFDELIDPC 515
+ + KSDV++FGV+L E+ +S P +D+++ +E+ + + + + C
Sbjct: 193 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRMERPEGCP-------- 243
Query: 516 LGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEV 552
V EL C Q N RPS E+
Sbjct: 244 -------------EKVYELMRACWQWNPSDRPSFAEI 267
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 137/295 (46%), Gaps = 36/295 (12%)
Query: 265 VYF-GVPIFSYSDLAEATNDFSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNNYRRV 322
+YF G P +Y D + + +LG G +G VY G K VAVK L ++ V
Sbjct: 10 LYFQGSP--NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEV 66
Query: 323 EQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHG-DRAKHGLLT 381
E+F+ E ++ ++H NLV L G +R ++ EF+ G + D L +R + +
Sbjct: 67 EEFLKEAAVMKEIKHPNLVQLLGVCTR-EPPFYIITEFMTYGNLLDYLRECNRQEVNAV- 124
Query: 382 WPIRMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVS 441
+ + +A + +SA+ YL + IHRD+ N L+ N VKVADFGLSRL D
Sbjct: 125 --VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 182
Query: 442 TAPQGTPGYVDPEYHQCYQLTDKSDVYSFGVVLIEL----ISSMPAVDMNRHRHEINLAN 497
+ + PE + + KSDV++FGV+L E+ +S P +D+++ +E+ +
Sbjct: 183 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKD 241
Query: 498 LAINKIQKCAFDELIDPCLGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEV 552
+ + + C V EL C Q N RPS E+
Sbjct: 242 YRMERPEGCP---------------------EKVYELMRACWQWNPSDRPSFAEI 275
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 128/276 (46%), Gaps = 31/276 (11%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNL 340
D + + +LG G +G VY G K VAVK L ++ VE+F+ E ++ ++H NL
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNL 71
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
V L G +R ++ EF+ G + D L ++ + + +A + +SA+ YL
Sbjct: 72 VQLLGVCTR-EPPFYIIIEFMTYGNLLDYLR--ECNRQEVSAVVLLYMATQISSAMEYLE 128
Query: 401 ASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQ 460
+ IHRD+ N L+ N VKVADFGLSRL D + + PE +
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 461 LTDKSDVYSFGVVLIEL----ISSMPAVDMNRHRHEINLANLAINKIQKCAFDELIDPCL 516
+ KSDV++FGV+L E+ +S P +D+++ +E+ + + + + C
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRMERPEGCP--------- 238
Query: 517 GFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEV 552
V EL C Q N RPS E+
Sbjct: 239 ------------EKVYELMRACWQWNPSDRPSFAEI 262
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 128/276 (46%), Gaps = 31/276 (11%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNL 340
D + + +LG G +G VY G K VAVK L ++ VE+F+ E ++ ++H NL
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNL 76
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
V L G +R ++ EF+ G + D L ++ + + +A + +SA+ YL
Sbjct: 77 VQLLGVCTR-EPPFYIITEFMTYGNLLDYLR--ECNRQEVSAVVLLYMATQISSAMEYLE 133
Query: 401 ASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQ 460
+ IHRD+ N L+ N VKVADFGLSRL D + + PE +
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 193
Query: 461 LTDKSDVYSFGVVLIEL----ISSMPAVDMNRHRHEINLANLAINKIQKCAFDELIDPCL 516
+ KSDV++FGV+L E+ +S P +D+++ +E+ + + + + C
Sbjct: 194 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRMERPEGCP--------- 243
Query: 517 GFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEV 552
V EL C Q N RPS E+
Sbjct: 244 ------------EKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 133/289 (46%), Gaps = 33/289 (11%)
Query: 270 PIFSYSDLAEATNDFSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNNYRRVEQFMNE 328
P +Y D + + +LG G +G VY G K VAVK L ++ VE+F+ E
Sbjct: 5 PSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKE 63
Query: 329 VEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHG-DRAKHGLLTWPIRMN 387
++ ++H NLV L G +R ++ EF+ G + D L +R + + + +
Sbjct: 64 AAVMKEIKHPNLVQLLGVCTR-EPPFYIITEFMTYGNLLDYLRECNRQEVNAV---VLLY 119
Query: 388 IAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGT 447
+A + +SA+ YL + IHRD+ N L+ N VKVADFGLSRL D +
Sbjct: 120 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 179
Query: 448 PGYVDPEYHQCYQLTDKSDVYSFGVVLIEL----ISSMPAVDMNRHRHEINLANLAINKI 503
+ PE + + KSDV++FGV+L E+ +S P +D+++ +E+ + + +
Sbjct: 180 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRMERP 238
Query: 504 QKCAFDELIDPCLGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEV 552
+ C V EL C Q N RPS E+
Sbjct: 239 EGCP---------------------EKVYELMRACWQWNPSDRPSFAEI 266
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 130/277 (46%), Gaps = 33/277 (11%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNL 340
D + + +LG G +G VY G K VAVK L ++ VE+F+ E ++ ++H NL
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNL 71
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQLHG-DRAKHGLLTWPIRMNIAIETASALAYL 399
V L G +R ++ EF+ G + D L +R + + + + +A + +SA+ YL
Sbjct: 72 VQLLGVCTR-EPPFYIIIEFMTYGNLLDYLRECNRQEVSAV---VLLYMATQISSAMEYL 127
Query: 400 HASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCY 459
+ IHRD+ N L+ N VKVADFGLSRL D + + PE
Sbjct: 128 EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYN 187
Query: 460 QLTDKSDVYSFGVVLIEL----ISSMPAVDMNRHRHEINLANLAINKIQKCAFDELIDPC 515
+ + KSDV++FGV+L E+ +S P +D+++ +E+ + + + + C
Sbjct: 188 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRMERPEGCP-------- 238
Query: 516 LGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEV 552
V EL C Q N RPS E+
Sbjct: 239 -------------EKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 130/277 (46%), Gaps = 33/277 (11%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNL 340
D + + +LG G +G VY G K VAVK L ++ VE+F+ E ++ ++H NL
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNL 71
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQLHG-DRAKHGLLTWPIRMNIAIETASALAYL 399
V L G +R ++ EF+ G + D L +R + + + + +A + +SA+ YL
Sbjct: 72 VQLLGVCTR-EPPFYIITEFMTYGNLLDYLRECNRQEVSAV---VLLYMATQISSAMEYL 127
Query: 400 HASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCY 459
+ IHRD+ N L+ N VKVADFGLSRL D + + PE
Sbjct: 128 EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYN 187
Query: 460 QLTDKSDVYSFGVVLIEL----ISSMPAVDMNRHRHEINLANLAINKIQKCAFDELIDPC 515
+ + KSDV++FGV+L E+ +S P +D+++ +E+ + + + + C
Sbjct: 188 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRMERPEGCP-------- 238
Query: 516 LGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEV 552
V EL C Q N RPS E+
Sbjct: 239 -------------EKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 130/277 (46%), Gaps = 33/277 (11%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNL 340
D + + +LG G +G VY G K VAVK L ++ VE+F+ E ++ ++H NL
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNL 76
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQLHG-DRAKHGLLTWPIRMNIAIETASALAYL 399
V L G +R ++ EF+ G + D L +R + + + + +A + +SA+ YL
Sbjct: 77 VQLLGVCTR-EPPFYIITEFMTYGNLLDYLRECNRQEVNAV---VLLYMATQISSAMEYL 132
Query: 400 HASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCY 459
+ IHRD+ N L+ N VKVADFGLSRL D + + PE
Sbjct: 133 EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYN 192
Query: 460 QLTDKSDVYSFGVVLIEL----ISSMPAVDMNRHRHEINLANLAINKIQKCAFDELIDPC 515
+ + KSDV++FGV+L E+ +S P +D+++ +E+ + + + + C
Sbjct: 193 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRMERPEGCP-------- 243
Query: 516 LGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEV 552
V EL C Q N RPS E+
Sbjct: 244 -------------EKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 130/277 (46%), Gaps = 33/277 (11%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNL 340
D + + +LG G +G VY G K VAVK L ++ VE+F+ E ++ ++H NL
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNL 71
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQLHG-DRAKHGLLTWPIRMNIAIETASALAYL 399
V L G +R ++ EF+ G + D L +R + + + + +A + +SA+ YL
Sbjct: 72 VQLLGVCTR-EPPFYIITEFMTYGNLLDYLRECNRQEVNAV---VLLYMATQISSAMEYL 127
Query: 400 HASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCY 459
+ IHRD+ N L+ N VKVADFGLSRL D + + PE
Sbjct: 128 EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYN 187
Query: 460 QLTDKSDVYSFGVVLIEL----ISSMPAVDMNRHRHEINLANLAINKIQKCAFDELIDPC 515
+ + KSDV++FGV+L E+ +S P +D+++ +E+ + + + + C
Sbjct: 188 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRMERPEGCP-------- 238
Query: 516 LGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEV 552
V EL C Q N RPS E+
Sbjct: 239 -------------EKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 130/277 (46%), Gaps = 33/277 (11%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNL 340
D + + +LG G +G VY G K VAVK L ++ VE+F+ E ++ ++H NL
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNL 71
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQLHG-DRAKHGLLTWPIRMNIAIETASALAYL 399
V L G +R ++ EF+ G + D L +R + + + + +A + +SA+ YL
Sbjct: 72 VQLLGVCTR-EPPFYIITEFMTYGNLLDYLRECNRQEVSAV---VLLYMATQISSAMEYL 127
Query: 400 HASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCY 459
+ IHRD+ N L+ N VKVADFGLSRL D + + PE
Sbjct: 128 EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYN 187
Query: 460 QLTDKSDVYSFGVVLIEL----ISSMPAVDMNRHRHEINLANLAINKIQKCAFDELIDPC 515
+ + KSDV++FGV+L E+ +S P +D+++ +E+ + + + + C
Sbjct: 188 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRMERPEGCP-------- 238
Query: 516 LGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEV 552
V EL C Q N RPS E+
Sbjct: 239 -------------EKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 130/277 (46%), Gaps = 33/277 (11%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNL 340
D + + +LG G +G VY G K VAVK L ++ VE+F+ E ++ ++H NL
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNL 71
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQLHG-DRAKHGLLTWPIRMNIAIETASALAYL 399
V L G +R ++ EF+ G + D L +R + + + + +A + +SA+ YL
Sbjct: 72 VQLLGVCTR-EPPFYIITEFMTYGNLLDYLRECNRQEVNAV---VLLYMATQISSAMEYL 127
Query: 400 HASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCY 459
+ IHRD+ N L+ N VKVADFGLSRL D + + PE
Sbjct: 128 EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYN 187
Query: 460 QLTDKSDVYSFGVVLIEL----ISSMPAVDMNRHRHEINLANLAINKIQKCAFDELIDPC 515
+ + KSDV++FGV+L E+ +S P +D+++ +E+ + + + + C
Sbjct: 188 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRMERPEGCP-------- 238
Query: 516 LGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEV 552
V EL C Q N RPS E+
Sbjct: 239 -------------EKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 134/273 (49%), Gaps = 25/273 (9%)
Query: 288 KELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCT 347
+E+G G FG V+ G + +VA+K + + + + F+ E E++ +L H LV L+G
Sbjct: 33 QEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSE-DDFIEEAEVMMKLSHPKLVQLYGVC 91
Query: 348 SRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDIIHR 407
+ + LV+EF+ +G ++D L R + GL + + ++ +AYL + +IHR
Sbjct: 92 LEQAP-ICLVFEFMEHGCLSDYL---RTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHR 147
Query: 408 DVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP-GYVDPEYHQCYQLTDKSD 466
D+ N L+ N +KV+DFG++R F LD + S+ P + PE + + KSD
Sbjct: 148 DLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 206
Query: 467 VYSFGVVLIELISSMPAVDMNRHRHEINLANLAINKIQKCAFDELIDPCLGFESDEEVKR 526
V+SFGV++ E+ S NR E+ + D GF + +
Sbjct: 207 VWSFGVLMWEVFSEGKIPYENRSNSEV-----------------VEDISTGFRLYKP-RL 248
Query: 527 MTTSVAELAFLCLQQNKELRPSMEEVLAELQRI 559
+T V ++ C ++ E RP+ +L +L I
Sbjct: 249 ASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEI 281
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 130/277 (46%), Gaps = 33/277 (11%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNL 340
D + + +LG G +G VY G K VAVK L ++ VE+F+ E ++ ++H NL
Sbjct: 15 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNL 73
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQLHG-DRAKHGLLTWPIRMNIAIETASALAYL 399
V L G +R ++ EF+ G + D L +R + + + + +A + +SA+ YL
Sbjct: 74 VQLLGVCTR-EPPFYIITEFMTYGNLLDYLRECNRQEVNAV---VLLYMATQISSAMEYL 129
Query: 400 HASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCY 459
+ IHRD+ N L+ N VKVADFGLSRL D + + PE
Sbjct: 130 EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYN 189
Query: 460 QLTDKSDVYSFGVVLIEL----ISSMPAVDMNRHRHEINLANLAINKIQKCAFDELIDPC 515
+ + KSDV++FGV+L E+ +S P +D+++ +E+ + + + + C
Sbjct: 190 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRMERPEGCP-------- 240
Query: 516 LGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEV 552
V EL C Q N RPS E+
Sbjct: 241 -------------EKVYELMRACWQWNPSDRPSFAEI 264
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 136/280 (48%), Gaps = 31/280 (11%)
Query: 288 KELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCT 347
+ +G G FGTVY GK V + + ++++ F NEV +L + RH N++ G +
Sbjct: 30 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 348 SRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDIIHR 407
++ L +V ++ ++ LH K + ++IA +TA + YLHA IIHR
Sbjct: 90 TKPQ--LAIVTQWCEGSSLYHHLHASETKFEMKK---LIDIARQTARGMDYLHAKSIIHR 144
Query: 408 DVKTNNILLDSNFCVKVADFGL-SRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQLTD--- 463
D+K+NNI L + VK+ DFGL + +H G+ ++ PE ++ D
Sbjct: 145 DLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE---VIRMQDSNP 201
Query: 464 ---KSDVYSFGVVLIELISS-MPAVDMNRHRHEINLANLAINKIQKCAFDELIDPCLGFE 519
+SDVY+FG+VL EL++ +P ++N I + + P L
Sbjct: 202 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGS-----------LSPDLSKV 250
Query: 520 SDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLAELQRI 559
KRM +AE CL++ ++ RPS +LAE++ +
Sbjct: 251 RSNCPKRMKRLMAE----CLKKKRDERPSFPRILAEIEEL 286
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 130/277 (46%), Gaps = 33/277 (11%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNL 340
D + + +LG G +G VY G K VAVK L ++ VE+F+ E ++ ++H NL
Sbjct: 15 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNL 73
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQLHG-DRAKHGLLTWPIRMNIAIETASALAYL 399
V L G +R ++ EF+ G + D L +R + + + + +A + +SA+ YL
Sbjct: 74 VQLLGVCTR-EPPFYIITEFMTYGNLLDYLRECNRQEVNAV---VLLYMATQISSAMEYL 129
Query: 400 HASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCY 459
+ IHRD+ N L+ N VKVADFGLSRL D + + PE
Sbjct: 130 EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYN 189
Query: 460 QLTDKSDVYSFGVVLIEL----ISSMPAVDMNRHRHEINLANLAINKIQKCAFDELIDPC 515
+ + KSDV++FGV+L E+ +S P +D+++ +E+ + + + + C
Sbjct: 190 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRMERPEGCP-------- 240
Query: 516 LGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEV 552
V EL C Q N RPS E+
Sbjct: 241 -------------EKVYELMRACWQWNPSDRPSFAEI 264
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 127/276 (46%), Gaps = 31/276 (11%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNL 340
D + + +LG G FG VY G K VAVK L ++ VE+F+ E ++ ++H NL
Sbjct: 11 TDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNL 69
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
V L G +R ++ EF+ G + D L ++ + + +A + +SA+ YL
Sbjct: 70 VQLLGVCTR-EPPFYIITEFMTYGNLLDYLR--ECNRQEVSAVVLLYMATQISSAMEYLE 126
Query: 401 ASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQ 460
+ IHRD+ N L+ N VKVADFGLSRL D + + PE +
Sbjct: 127 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNK 186
Query: 461 LTDKSDVYSFGVVLIEL----ISSMPAVDMNRHRHEINLANLAINKIQKCAFDELIDPCL 516
+ KSDV++FGV+L E+ +S P +D ++ +E+ + + + + C
Sbjct: 187 FSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQ-VYELLEKDYRMERPEGCP--------- 236
Query: 517 GFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEV 552
V EL C Q N RPS E+
Sbjct: 237 ------------EKVYELMRACWQWNPSDRPSFAEI 260
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 110/205 (53%), Gaps = 13/205 (6%)
Query: 288 KELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCT 347
K LG+G FG V+ G +VA+K L E F+ E +I+ +L+H LV L+
Sbjct: 15 KRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSP-ESFLEEAQIMKKLKHDKLVQLYAVV 73
Query: 348 SRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDIIHR 407
S + + +V E++ G++ D L + L P +++A + A+ +AY+ + IHR
Sbjct: 74 S--EEPIYIVTEYMNKGSLLDFLKDGEGRA--LKLPNLVDMAAQVAAGMAYIERMNYIHR 129
Query: 408 DVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP---GYVDPEYHQCYQLTDK 464
D+++ NIL+ + K+ADFGL+RL + TA QG + PE + T K
Sbjct: 130 DLRSANILVGNGLICKIADFGLARLIE---DNEXTARQGAKFPIKWTAPEAALYGRFTIK 186
Query: 465 SDVYSFGVVLIELISS--MPAVDMN 487
SDV+SFG++L EL++ +P MN
Sbjct: 187 SDVWSFGILLTELVTKGRVPYPGMN 211
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 132/273 (48%), Gaps = 25/273 (9%)
Query: 288 KELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCT 347
+E+G G FG V+ G + +VA+K + + E F+ E E++ +L H LV L+G
Sbjct: 14 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVC 72
Query: 348 SRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDIIHR 407
+ + LV EF+ +G ++D L R + GL + + ++ +AYL + +IHR
Sbjct: 73 LEQAP-ICLVTEFMEHGCLSDYL---RTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHR 128
Query: 408 DVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP-GYVDPEYHQCYQLTDKSD 466
D+ N L+ N +KV+DFG++R F LD + S+ P + PE + + KSD
Sbjct: 129 DLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 187
Query: 467 VYSFGVVLIELISSMPAVDMNRHRHEINLANLAINKIQKCAFDELIDPCLGFESDEEVKR 526
V+SFGV++ E+ S NR E+ + D GF + +
Sbjct: 188 VWSFGVLMWEVFSEGKIPYENRSNSEV-----------------VEDISTGFRLYKP-RL 229
Query: 527 MTTSVAELAFLCLQQNKELRPSMEEVLAELQRI 559
+T V ++ C ++ E RP+ +L +L I
Sbjct: 230 ASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEI 262
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 136/280 (48%), Gaps = 31/280 (11%)
Query: 288 KELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCT 347
+ +G G FGTVY GK V + + ++++ F NEV +L + RH N++ G +
Sbjct: 30 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 348 SRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDIIHR 407
+ + L +V ++ ++ LH K + ++IA +TA + YLHA IIHR
Sbjct: 90 T--APQLAIVTQWCEGSSLYHHLHASETKFEMKK---LIDIARQTARGMDYLHAKSIIHR 144
Query: 408 DVKTNNILLDSNFCVKVADFGLS-RLFPLDVTHVSTAPQGTPGYVDPEYHQCYQLTD--- 463
D+K+NNI L + VK+ DFGL+ +H G+ ++ PE ++ D
Sbjct: 145 DLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE---VIRMQDSNP 201
Query: 464 ---KSDVYSFGVVLIELISS-MPAVDMNRHRHEINLANLAINKIQKCAFDELIDPCLGFE 519
+SDVY+FG+VL EL++ +P ++N I + + P L
Sbjct: 202 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGS-----------LSPDLSKV 250
Query: 520 SDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLAELQRI 559
KRM +AE CL++ ++ RPS +LAE++ +
Sbjct: 251 RSNCPKRMKRLMAE----CLKKKRDERPSFPRILAEIEEL 286
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 127/276 (46%), Gaps = 31/276 (11%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNL 340
D + + +LG G +G VY G K VAVK L ++ VE+F+ E ++ ++H NL
Sbjct: 11 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNL 69
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
V L G +R ++ EF+ G + D L ++ + + +A + +SA+ YL
Sbjct: 70 VQLLGVCTR-EPPFYIIIEFMTYGNLLDYLR--ECNRQEVSAVVLLYMATQISSAMEYLE 126
Query: 401 ASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQ 460
+ IHRD+ N L+ N VKVADFGLSRL D + + PE +
Sbjct: 127 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNK 186
Query: 461 LTDKSDVYSFGVVLIEL----ISSMPAVDMNRHRHEINLANLAINKIQKCAFDELIDPCL 516
+ KSDV++FGV+L E+ +S P +D ++ +E+ + + + + C
Sbjct: 187 FSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQ-VYELLEKDYRMERPEGCP--------- 236
Query: 517 GFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEV 552
V EL C Q N RPS E+
Sbjct: 237 ------------EKVYELMRACWQWNPSDRPSFAEI 260
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 136/295 (46%), Gaps = 35/295 (11%)
Query: 264 TVYFGVPIFSYSDLAEATNDFSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNNYRRV 322
TVY P +Y D + + +LG G +G VY G K VAVK L ++ V
Sbjct: 243 TVYGVSP--NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEV 299
Query: 323 EQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHG-DRAKHGLLT 381
E+F+ E ++ ++H NLV L G +R ++ EF+ G + D L +R + +
Sbjct: 300 EEFLKEAAVMKEIKHPNLVQLLGVCTR-EPPFYIITEFMTYGNLLDYLRECNRQEVNAV- 357
Query: 382 WPIRMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVS 441
+ + +A + +SA+ YL + IHR++ N L+ N VKVADFGLSRL D
Sbjct: 358 --VLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 415
Query: 442 TAPQGTPGYVDPEYHQCYQLTDKSDVYSFGVVLIEL----ISSMPAVDMNRHRHEINLAN 497
+ + PE + + KSDV++FGV+L E+ +S P +D+++ +E+ +
Sbjct: 416 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKD 474
Query: 498 LAINKIQKCAFDELIDPCLGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEV 552
+ + + C V EL C Q N RPS E+
Sbjct: 475 YRMERPEGCP---------------------EKVYELMRACWQWNPSDRPSFAEI 508
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/326 (30%), Positives = 150/326 (46%), Gaps = 32/326 (9%)
Query: 258 TDLETGTVYFGVPIFSYSDLAEATNDFSREK------ELGDGGFGTVYYGKLKDGREVAV 311
DL T +YF S T D + E ELGDG FG VY + K+ +A
Sbjct: 11 VDLGTENLYFQ----SMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAA 66
Query: 312 KRLYDN-NYRRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTV-ADQ 369
++ D + +E +M E++IL H N+V L Y L ++ EF A G V A
Sbjct: 67 AKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF-YYENNLWILIEFCAGGAVDAVM 125
Query: 370 LHGDRAKHGLLTWPIRMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGL 429
L +R LT + +T AL YLH + IIHRD+K NIL + +K+ADFG+
Sbjct: 126 LELERP----LTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGV 181
Query: 430 SRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQLTD-----KSDVYSFGVVLIELIS-SMPA 483
S + + GTP ++ PE C D K+DV+S G+ LIE+ P
Sbjct: 182 SAKNTRTIQRRDSFI-GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPH 240
Query: 484 VDMNRHRHEINLA-----NLAINKIQKCAFDELIDPCLGFESDEEVKRMTTSVAELAFLC 538
++N R + +A LA F + + CL E + + + T+ + + F+
Sbjct: 241 HELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCL--EKNVDARWTTSQLLQHPFVT 298
Query: 539 LQQNKELRPSMEEVLAEL-QRIKSGK 563
+ NK +R + E AE+ + ++ GK
Sbjct: 299 VDSNKPIRELIAEAKAEVTEEVEDGK 324
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 136/295 (46%), Gaps = 35/295 (11%)
Query: 264 TVYFGVPIFSYSDLAEATNDFSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNNYRRV 322
TVY P +Y D + + +LG G +G VY G K VAVK L ++ V
Sbjct: 201 TVYGVSP--NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEV 257
Query: 323 EQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHG-DRAKHGLLT 381
E+F+ E ++ ++H NLV L G +R ++ EF+ G + D L +R + +
Sbjct: 258 EEFLKEAAVMKEIKHPNLVQLLGVCTR-EPPFYIITEFMTYGNLLDYLRECNRQEVNAV- 315
Query: 382 WPIRMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVS 441
+ + +A + +SA+ YL + IHR++ N L+ N VKVADFGLSRL D
Sbjct: 316 --VLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 373
Query: 442 TAPQGTPGYVDPEYHQCYQLTDKSDVYSFGVVLIEL----ISSMPAVDMNRHRHEINLAN 497
+ + PE + + KSDV++FGV+L E+ +S P +D+++ +E+ +
Sbjct: 374 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKD 432
Query: 498 LAINKIQKCAFDELIDPCLGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEV 552
+ + + C V EL C Q N RPS E+
Sbjct: 433 YRMERPEGCP---------------------EKVYELMRACWQWNPSDRPSFAEI 466
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/326 (30%), Positives = 150/326 (46%), Gaps = 32/326 (9%)
Query: 258 TDLETGTVYFGVPIFSYSDLAEATNDFSREK------ELGDGGFGTVYYGKLKDGREVAV 311
DL T +YF S T D + E ELGDG FG VY + K+ +A
Sbjct: 11 VDLGTENLYFQ----SMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAA 66
Query: 312 KRLYDN-NYRRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTV-ADQ 369
++ D + +E +M E++IL H N+V L Y L ++ EF A G V A
Sbjct: 67 AKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF-YYENNLWILIEFCAGGAVDAVM 125
Query: 370 LHGDRAKHGLLTWPIRMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGL 429
L +R LT + +T AL YLH + IIHRD+K NIL + +K+ADFG+
Sbjct: 126 LELERP----LTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGV 181
Query: 430 SRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQLTD-----KSDVYSFGVVLIELIS-SMPA 483
S + + GTP ++ PE C D K+DV+S G+ LIE+ P
Sbjct: 182 SAKNTRXIQRRDSFI-GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPH 240
Query: 484 VDMNRHRHEINLA-----NLAINKIQKCAFDELIDPCLGFESDEEVKRMTTSVAELAFLC 538
++N R + +A LA F + + CL E + + + T+ + + F+
Sbjct: 241 HELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCL--EKNVDARWTTSQLLQHPFVT 298
Query: 539 LQQNKELRPSMEEVLAEL-QRIKSGK 563
+ NK +R + E AE+ + ++ GK
Sbjct: 299 VDSNKPIRELIAEAKAEVTEEVEDGK 324
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 136/295 (46%), Gaps = 35/295 (11%)
Query: 264 TVYFGVPIFSYSDLAEATNDFSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNNYRRV 322
T+Y P +Y D + + +LG G +G VY G K VAVK L ++ V
Sbjct: 204 TIYGVSP--NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEV 260
Query: 323 EQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHG-DRAKHGLLT 381
E+F+ E ++ ++H NLV L G +R ++ EF+ G + D L +R + +
Sbjct: 261 EEFLKEAAVMKEIKHPNLVQLLGVCTR-EPPFYIITEFMTYGNLLDYLRECNRQEVSAV- 318
Query: 382 WPIRMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVS 441
+ + +A + +SA+ YL + IHR++ N L+ N VKVADFGLSRL D
Sbjct: 319 --VLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 376
Query: 442 TAPQGTPGYVDPEYHQCYQLTDKSDVYSFGVVLIEL----ISSMPAVDMNRHRHEINLAN 497
+ + PE + + KSDV++FGV+L E+ +S P +D+++ +E+ +
Sbjct: 377 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKD 435
Query: 498 LAINKIQKCAFDELIDPCLGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEV 552
+ + + C V EL C Q N RPS E+
Sbjct: 436 YRMERPEGCP---------------------EKVYELMRACWQWNPSDRPSFAEI 469
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 127/276 (46%), Gaps = 31/276 (11%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNL 340
D + + +LG G +G VY G K VAVK L ++ VE+F+ E ++ ++H NL
Sbjct: 11 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNL 69
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
V L G +R ++ EF+ G + D L ++ + + +A + +SA+ YL
Sbjct: 70 VQLLGVCTR-EPPFYIITEFMTYGNLLDYLR--ECNRQEVSAVVLLYMATQISSAMEYLE 126
Query: 401 ASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQ 460
+ IHRD+ N L+ N VKVADFGLSRL D + + PE +
Sbjct: 127 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNK 186
Query: 461 LTDKSDVYSFGVVLIEL----ISSMPAVDMNRHRHEINLANLAINKIQKCAFDELIDPCL 516
+ KSDV++FGV+L E+ +S P +D ++ +E+ + + + + C
Sbjct: 187 FSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQ-VYELLEKDYRMERPEGCP--------- 236
Query: 517 GFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEV 552
V EL C Q N RPS E+
Sbjct: 237 ------------EKVYELMRACWQWNPSDRPSFAEI 260
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 132/276 (47%), Gaps = 25/276 (9%)
Query: 290 LGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCTSR 349
+G G FGTVY GK V + ++ D + + F NEV +L + RH N++ G ++
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK 103
Query: 350 YSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDIIHRDV 409
L +V ++ ++ LH K + ++IA +TA + YLHA +IIHRD+
Sbjct: 104 --DNLAIVTQWCEGSSLYKHLHVQETKFQMFQ---LIDIARQTAQGMDYLHAKNIIHRDM 158
Query: 410 KTNNILLDSNFCVKVADFGLSRLFP-LDVTHVSTAPQGTPGYVDPEYHQCYQ---LTDKS 465
K+NNI L VK+ DFGL+ + + P G+ ++ PE + + +S
Sbjct: 159 KSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQS 218
Query: 466 DVYSFGVVLIELISS-MPAVDMNRHRHEINLANLAINKIQKCAFDELIDPCLGFESDEEV 524
DVYS+G+VL EL++ +P +N I + +L C
Sbjct: 219 DVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRG---YASPDLSKLYKNC--------P 267
Query: 525 KRMTTSVAELAFLCLQQNKELRPSMEEVLAELQRIK 560
K M VA+ C+++ KE RP ++L+ ++ ++
Sbjct: 268 KAMKRLVAD----CVKKVKEERPLFPQILSSIELLQ 299
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 98/326 (30%), Positives = 149/326 (45%), Gaps = 32/326 (9%)
Query: 258 TDLETGTVYFGVPIFSYSDLAEATNDFSREK------ELGDGGFGTVYYGKLKDGREVAV 311
DL T +YF S T D + E ELGDG FG VY + K+ +A
Sbjct: 11 VDLGTENLYFQ----SMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAA 66
Query: 312 KRLYDN-NYRRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTV-ADQ 369
++ D + +E +M E++IL H N+V L Y L ++ EF A G V A
Sbjct: 67 AKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF-YYENNLWILIEFCAGGAVDAVM 125
Query: 370 LHGDRAKHGLLTWPIRMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGL 429
L +R LT + +T AL YLH + IIHRD+K NIL + +K+ADFG+
Sbjct: 126 LELERP----LTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGV 181
Query: 430 SRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQLTD-----KSDVYSFGVVLIELIS-SMPA 483
S + GTP ++ PE C D K+DV+S G+ LIE+ P
Sbjct: 182 SAKNTRXIQRRDXFI-GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPH 240
Query: 484 VDMNRHRHEINLA-----NLAINKIQKCAFDELIDPCLGFESDEEVKRMTTSVAELAFLC 538
++N R + +A LA F + + CL E + + + T+ + + F+
Sbjct: 241 HELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCL--EKNVDARWTTSQLLQHPFVT 298
Query: 539 LQQNKELRPSMEEVLAEL-QRIKSGK 563
+ NK +R + E AE+ + ++ GK
Sbjct: 299 VDSNKPIRELIAEAKAEVTEEVEDGK 324
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 115/237 (48%), Gaps = 15/237 (6%)
Query: 258 TDLETGTVYFGVPIFSYSDLAEATNDFSREKELGDGGFGTVYYGKLKD-GREVAVKRLYD 316
DL T +YF S D + + +LG G +G VY G K VAVK L +
Sbjct: 12 VDLGTENLYFQ----SMDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKE 67
Query: 317 NNYRRVEQFMNEVEILTRLRHKNLVSLFG-CTSRYSQGLLLVYEFVANGTVADQLHGDRA 375
+ VE+F+ E ++ ++H NLV L G CT +V E++ G + D L
Sbjct: 68 DT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCT--LEPPFYIVTEYMPYGNLLDYLR--EC 122
Query: 376 KHGLLTWPIRMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPL 435
+T + + +A + +SA+ YL + IHRD+ N L+ N VKVADFGLSRL
Sbjct: 123 NREEVTAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTG 182
Query: 436 DVTHVSTAPQGTPGYVDPEYHQCYQLTDKSDVYSFGVVLIEL----ISSMPAVDMNR 488
D + + PE + KSDV++FGV+L E+ +S P +D+++
Sbjct: 183 DTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ 239
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 135/278 (48%), Gaps = 31/278 (11%)
Query: 288 KELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCT 347
+ +G G FGTVY GK V + + ++++ F NEV +L + RH N++ G +
Sbjct: 16 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 75
Query: 348 SRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDIIHR 407
++ L +V ++ ++ LH K ++ ++IA +TA + YLHA IIHR
Sbjct: 76 TKPQ--LAIVTQWCEGSSLYHHLHIIETKFEMIK---LIDIARQTAQGMDYLHAKSIIHR 130
Query: 408 DVKTNNILLDSNFCVKVADFGLSRLFP-LDVTHVSTAPQGTPGYVDPEYHQCYQLTDK-- 464
D+K+NNI L + VK+ DFGL+ + +H G+ ++ PE ++ DK
Sbjct: 131 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE---VIRMQDKNP 187
Query: 465 ----SDVYSFGVVLIELISS-MPAVDMNRHRHEINLANLAINKIQKCAFDELIDPCLGFE 519
SDVY+FG+VL EL++ +P ++N I + + P L
Sbjct: 188 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRG-----------YLSPDLSKV 236
Query: 520 SDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLAELQ 557
K M +AE CL++ ++ RP ++LA ++
Sbjct: 237 RSNCPKAMKRLMAE----CLKKKRDERPLFPQILASIE 270
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 135/278 (48%), Gaps = 31/278 (11%)
Query: 288 KELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCT 347
+ +G G FGTVY GK V + + ++++ F NEV +L + RH N++ G +
Sbjct: 19 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 348 SRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDIIHR 407
++ L +V ++ ++ LH K ++ ++IA +TA + YLHA IIHR
Sbjct: 79 TKPQ--LAIVTQWCEGSSLYHHLHIIETKFEMIK---LIDIARQTAQGMDYLHAKSIIHR 133
Query: 408 DVKTNNILLDSNFCVKVADFGLSRLFP-LDVTHVSTAPQGTPGYVDPEYHQCYQLTDK-- 464
D+K+NNI L + VK+ DFGL+ + +H G+ ++ PE ++ DK
Sbjct: 134 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE---VIRMQDKNP 190
Query: 465 ----SDVYSFGVVLIELISS-MPAVDMNRHRHEINLANLAINKIQKCAFDELIDPCLGFE 519
SDVY+FG+VL EL++ +P ++N I + + P L
Sbjct: 191 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRG-----------YLSPDLSKV 239
Query: 520 SDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLAELQ 557
K M +AE CL++ ++ RP ++LA ++
Sbjct: 240 RSNCPKAMKRLMAE----CLKKKRDERPLFPQILASIE 273
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 135/278 (48%), Gaps = 31/278 (11%)
Query: 288 KELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCT 347
+ +G G FGTVY GK V + + ++++ F NEV +L + RH N++ G +
Sbjct: 19 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 348 SRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDIIHR 407
++ L +V ++ ++ LH K ++ ++IA +TA + YLHA IIHR
Sbjct: 79 TKPQ--LAIVTQWCEGSSLYHHLHIIETKFEMIK---LIDIARQTAQGMDYLHAKSIIHR 133
Query: 408 DVKTNNILLDSNFCVKVADFGLSRLFP-LDVTHVSTAPQGTPGYVDPEYHQCYQLTDK-- 464
D+K+NNI L + VK+ DFGL+ + +H G+ ++ PE ++ DK
Sbjct: 134 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE---VIRMQDKNP 190
Query: 465 ----SDVYSFGVVLIELISS-MPAVDMNRHRHEINLANLAINKIQKCAFDELIDPCLGFE 519
SDVY+FG+VL EL++ +P ++N I + + P L
Sbjct: 191 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRG-----------YLSPDLSKV 239
Query: 520 SDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLAELQ 557
K M +AE CL++ ++ RP ++LA ++
Sbjct: 240 RSNCPKAMKRLMAE----CLKKKRDERPLFPQILASIE 273
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 135/278 (48%), Gaps = 31/278 (11%)
Query: 288 KELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCT 347
+ +G G FGTVY GK V + + ++++ F NEV +L + RH N++ G +
Sbjct: 14 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 348 SRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDIIHR 407
++ L +V ++ ++ LH K ++ ++IA +TA + YLHA IIHR
Sbjct: 74 TKPQ--LAIVTQWCEGSSLYHHLHIIETKFEMIK---LIDIARQTAQGMDYLHAKSIIHR 128
Query: 408 DVKTNNILLDSNFCVKVADFGLSRLFP-LDVTHVSTAPQGTPGYVDPEYHQCYQLTDK-- 464
D+K+NNI L + VK+ DFGL+ + +H G+ ++ PE ++ DK
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE---VIRMQDKNP 185
Query: 465 ----SDVYSFGVVLIELISS-MPAVDMNRHRHEINLANLAINKIQKCAFDELIDPCLGFE 519
SDVY+FG+VL EL++ +P ++N I + + P L
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRG-----------YLSPDLSKV 234
Query: 520 SDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLAELQ 557
K M +AE CL++ ++ RP ++LA ++
Sbjct: 235 RSNCPKAMKRLMAE----CLKKKRDERPLFPQILASIE 268
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 135/278 (48%), Gaps = 31/278 (11%)
Query: 288 KELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCT 347
+ +G G FGTVY GK V + + ++++ F NEV +L + RH N++ G +
Sbjct: 41 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 100
Query: 348 SRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDIIHR 407
++ L +V ++ ++ LH K ++ ++IA +TA + YLHA IIHR
Sbjct: 101 TKPQ--LAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLHAKSIIHR 155
Query: 408 DVKTNNILLDSNFCVKVADFGLSRLFP-LDVTHVSTAPQGTPGYVDPEYHQCYQLTDK-- 464
D+K+NNI L + VK+ DFGL+ + +H G+ ++ PE ++ DK
Sbjct: 156 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE---VIRMQDKNP 212
Query: 465 ----SDVYSFGVVLIELISS-MPAVDMNRHRHEINLANLAINKIQKCAFDELIDPCLGFE 519
SDVY+FG+VL EL++ +P ++N I + + P L
Sbjct: 213 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRG-----------YLSPDLSKV 261
Query: 520 SDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLAELQ 557
K M +AE CL++ ++ RP ++LA ++
Sbjct: 262 RSNCPKAMKRLMAE----CLKKKRDERPLFPQILASIE 295
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 135/278 (48%), Gaps = 31/278 (11%)
Query: 288 KELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCT 347
+ +G G FGTVY GK V + + ++++ F NEV +L + RH N++ G +
Sbjct: 14 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 348 SRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDIIHR 407
+ + L +V ++ ++ LH K ++ ++IA +TA + YLHA IIHR
Sbjct: 74 T--APQLAIVTQWCEGSSLYHHLHIIETKFEMIK---LIDIARQTAQGMDYLHAKSIIHR 128
Query: 408 DVKTNNILLDSNFCVKVADFGLSRLFP-LDVTHVSTAPQGTPGYVDPEYHQCYQLTDK-- 464
D+K+NNI L + VK+ DFGL+ + +H G+ ++ PE ++ DK
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE---VIRMQDKNP 185
Query: 465 ----SDVYSFGVVLIELISS-MPAVDMNRHRHEINLANLAINKIQKCAFDELIDPCLGFE 519
SDVY+FG+VL EL++ +P ++N I + + P L
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRG-----------YLSPDLSKV 234
Query: 520 SDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLAELQ 557
K M +AE CL++ ++ RP ++LA ++
Sbjct: 235 RSNCPKAMKRLMAE----CLKKKRDERPLFPQILASIE 268
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 135/278 (48%), Gaps = 31/278 (11%)
Query: 288 KELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCT 347
+ +G G FGTVY GK V + + ++++ F NEV +L + RH N++ G +
Sbjct: 42 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 348 SRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDIIHR 407
++ L +V ++ ++ LH K ++ ++IA +TA + YLHA IIHR
Sbjct: 102 TKPQ--LAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLHAKSIIHR 156
Query: 408 DVKTNNILLDSNFCVKVADFGLSRLFP-LDVTHVSTAPQGTPGYVDPEYHQCYQLTDK-- 464
D+K+NNI L + VK+ DFGL+ + +H G+ ++ PE ++ DK
Sbjct: 157 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE---VIRMQDKNP 213
Query: 465 ----SDVYSFGVVLIELISS-MPAVDMNRHRHEINLANLAINKIQKCAFDELIDPCLGFE 519
SDVY+FG+VL EL++ +P ++N I + + P L
Sbjct: 214 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRG-----------YLSPDLSKV 262
Query: 520 SDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLAELQ 557
K M +AE CL++ ++ RP ++LA ++
Sbjct: 263 RSNCPKAMKRLMAE----CLKKKRDERPLFPQILASIE 296
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 134/278 (48%), Gaps = 31/278 (11%)
Query: 288 KELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCT 347
+ +G G FGTVY GK V + + ++++ F NEV +L + RH N++ G +
Sbjct: 14 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 348 SRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDIIHR 407
++ L +V ++ ++ LH K ++ ++IA +TA + YLHA IIHR
Sbjct: 74 TKPQ--LAIVTQWCEGSSLYHHLHIIETKFEMIK---LIDIARQTAQGMDYLHAKSIIHR 128
Query: 408 DVKTNNILLDSNFCVKVADFGL-SRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQLTDK-- 464
D+K+NNI L + VK+ DFGL + +H G+ ++ PE ++ DK
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE---VIRMQDKNP 185
Query: 465 ----SDVYSFGVVLIELISS-MPAVDMNRHRHEINLANLAINKIQKCAFDELIDPCLGFE 519
SDVY+FG+VL EL++ +P ++N I + + P L
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRG-----------YLSPDLSKV 234
Query: 520 SDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLAELQ 557
K M +AE CL++ ++ RP ++LA ++
Sbjct: 235 RSNCPKAMKRLMAE----CLKKKRDERPLFPQILASIE 268
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 101/192 (52%), Gaps = 4/192 (2%)
Query: 288 KELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCT 347
K LG G FG V+ G + +VAVK L V+ F+ E ++ L+H LV L+
Sbjct: 19 KRLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVV 77
Query: 348 SRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDIIHR 407
+R + + ++ E++A G++ D L D LL P ++ + + A +AY+ + IHR
Sbjct: 78 TR-EEPIYIITEYMAKGSLLDFLKSDEGGKVLL--PKLIDFSAQIAEGMAYIERKNYIHR 134
Query: 408 DVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQLTDKSDV 467
D++ N+L+ + K+ADFGL+R+ + + + PE T KSDV
Sbjct: 135 DLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDV 194
Query: 468 YSFGVVLIELIS 479
+SFG++L E+++
Sbjct: 195 WSFGILLYEIVT 206
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 109/217 (50%), Gaps = 20/217 (9%)
Query: 282 NDFSREKELGDGGFGTVYYGK------LKDGREVAVKRLYDNNYRRVEQFMNEVEILTRL 335
D ++ELG+G FG V+ + KD VAVK L D + F E E+LT L
Sbjct: 15 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNL 74
Query: 336 RHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQL--HGD----------RAKHGLLTWP 383
+H+++V +G L++V+E++ +G + L HG R G L
Sbjct: 75 QHEHIVKFYGVCGD-GDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLS 133
Query: 384 IRMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSR-LFPLDVTHVST 442
++IA + AS + YL + +HRD+ T N L+ +N VK+ DFG+SR ++ D V
Sbjct: 134 QMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGG 193
Query: 443 APQGTPGYVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
++ PE + T +SDV+SFGV+L E+ +
Sbjct: 194 HTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 102/193 (52%), Gaps = 5/193 (2%)
Query: 287 EKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
EK+LG G FG V+ +VAVK + + VE F+ E ++ L+H LV L
Sbjct: 20 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMS-VEAFLAEANVMKTLQHDKLVKLHAV 78
Query: 347 TSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDIIH 406
++ + + ++ EF+A G++ D L D L P ++ + + A +A++ + IH
Sbjct: 79 VTK--EPIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIEQRNYIH 134
Query: 407 RDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQLTDKSD 466
RD++ NIL+ ++ K+ADFGL+R+ + + + PE T KSD
Sbjct: 135 RDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSD 194
Query: 467 VYSFGVVLIELIS 479
V+SFG++L+E+++
Sbjct: 195 VWSFGILLMEIVT 207
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 134/278 (48%), Gaps = 31/278 (11%)
Query: 288 KELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCT 347
+ +G G FGTVY GK V + + ++++ F NEV +L + RH N++ G +
Sbjct: 34 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 93
Query: 348 SRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDIIHR 407
++ L +V ++ ++ LH K ++ ++IA +TA + YLHA IIHR
Sbjct: 94 TKPQ--LAIVTQWCEGSSLYHHLHIIETKFEMIK---LIDIARQTAQGMDYLHAKSIIHR 148
Query: 408 DVKTNNILLDSNFCVKVADFGL-SRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQLTDK-- 464
D+K+NNI L + VK+ DFGL + +H G+ ++ PE ++ DK
Sbjct: 149 DLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE---VIRMQDKNP 205
Query: 465 ----SDVYSFGVVLIELISS-MPAVDMNRHRHEINLANLAINKIQKCAFDELIDPCLGFE 519
SDVY+FG+VL EL++ +P ++N I + + P L
Sbjct: 206 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRG-----------YLSPDLSKV 254
Query: 520 SDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLAELQ 557
K M +AE CL++ ++ RP ++LA ++
Sbjct: 255 RSNCPKAMKRLMAE----CLKKKRDERPLFPQILASIE 288
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 134/278 (48%), Gaps = 31/278 (11%)
Query: 288 KELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCT 347
+ +G G FGTVY GK V + + ++++ F NEV +L + RH N++ G +
Sbjct: 42 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 348 SRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDIIHR 407
++ L +V ++ ++ LH K ++ ++IA +TA + YLHA IIHR
Sbjct: 102 TKPQ--LAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLHAKSIIHR 156
Query: 408 DVKTNNILLDSNFCVKVADFGL-SRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQLTDK-- 464
D+K+NNI L + VK+ DFGL + +H G+ ++ PE ++ DK
Sbjct: 157 DLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE---VIRMQDKNP 213
Query: 465 ----SDVYSFGVVLIELISS-MPAVDMNRHRHEINLANLAINKIQKCAFDELIDPCLGFE 519
SDVY+FG+VL EL++ +P ++N I + + P L
Sbjct: 214 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRG-----------YLSPDLSKV 262
Query: 520 SDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLAELQ 557
K M +AE CL++ ++ RP ++LA ++
Sbjct: 263 RSNCPKAMKRLMAE----CLKKKRDERPLFPQILASIE 296
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 112/204 (54%), Gaps = 9/204 (4%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLV 341
D + KELG G FG V YGK + +VA+K + + + ++F+ E +++ L H+ LV
Sbjct: 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLV 62
Query: 342 SLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHA 401
L+G ++ + + ++ E++ANG + + L +H T + + + + A+ YL +
Sbjct: 63 QLYGVCTK-QRPIFIITEYMANGCLLNYLR--EMRHRFQTQQL-LEMCKDVCEAMEYLES 118
Query: 402 SDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP-GYVDPEYHQCYQ 460
+HRD+ N L++ VKV+DFGLSR + LD + S+ P + PE +
Sbjct: 119 KQFLHRDLAARNCLVNDQGVVKVSDFGLSR-YVLDDEYTSSVGSKFPVRWSPPEVLMYSK 177
Query: 461 LTDKSDVYSFGVVLIELIS--SMP 482
+ KSD+++FGV++ E+ S MP
Sbjct: 178 FSSKSDIWAFGVLMWEIYSLGKMP 201
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 102/193 (52%), Gaps = 5/193 (2%)
Query: 287 EKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
EK+LG G FG V+ +VAVK + + VE F+ E ++ L+H LV L
Sbjct: 193 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMS-VEAFLAEANVMKTLQHDKLVKLHAV 251
Query: 347 TSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDIIH 406
++ + + ++ EF+A G++ D L D L P ++ + + A +A++ + IH
Sbjct: 252 VTK--EPIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIEQRNYIH 307
Query: 407 RDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQLTDKSD 466
RD++ NIL+ ++ K+ADFGL+R+ + + + PE T KSD
Sbjct: 308 RDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSD 367
Query: 467 VYSFGVVLIELIS 479
V+SFG++L+E+++
Sbjct: 368 VWSFGILLMEIVT 380
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 112/204 (54%), Gaps = 9/204 (4%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLV 341
D + KELG G FG V YGK + +VA+K + + + ++F+ E +++ L H+ LV
Sbjct: 8 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLV 66
Query: 342 SLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHA 401
L+G ++ + + ++ E++ANG + + L +H T + + + + A+ YL +
Sbjct: 67 QLYGVCTK-QRPIFIITEYMANGCLLNYLR--EMRHRFQTQQL-LEMCKDVCEAMEYLES 122
Query: 402 SDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP-GYVDPEYHQCYQ 460
+HRD+ N L++ VKV+DFGLSR + LD + S+ P + PE +
Sbjct: 123 KQFLHRDLAARNCLVNDQGVVKVSDFGLSR-YVLDDEYTSSVGSKFPVRWSPPEVLMYSK 181
Query: 461 LTDKSDVYSFGVVLIELIS--SMP 482
+ KSD+++FGV++ E+ S MP
Sbjct: 182 FSSKSDIWAFGVLMWEIYSLGKMP 205
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 102/192 (53%), Gaps = 4/192 (2%)
Query: 288 KELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCT 347
K+LG G FG V+ G + +VAVK L V+ F+ E ++ L+H LV L+
Sbjct: 18 KKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVV 76
Query: 348 SRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDIIHR 407
++ + + ++ EF+A G++ D L D LL P ++ + + A +AY+ + IHR
Sbjct: 77 TK-EEPIYIITEFMAKGSLLDFLKSDEGGKVLL--PKLIDFSAQIAEGMAYIERKNYIHR 133
Query: 408 DVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQLTDKSDV 467
D++ N+L+ + K+ADFGL+R+ + + + PE T KS+V
Sbjct: 134 DLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNV 193
Query: 468 YSFGVVLIELIS 479
+SFG++L E+++
Sbjct: 194 WSFGILLYEIVT 205
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 114/218 (52%), Gaps = 9/218 (4%)
Query: 268 GVPIFSYSDLAEATNDFSREKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMN 327
G Y D + KELG G FG V YGK + +VA+K + + + ++F+
Sbjct: 1 GTAGLGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIE 59
Query: 328 EVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMN 387
E +++ L H+ LV L+G ++ + + ++ E++ANG + + L +H T + +
Sbjct: 60 EAKVMMNLSHEKLVQLYGVCTK-QRPIFIITEYMANGCLLNYLR--EMRHRFQTQQL-LE 115
Query: 388 IAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGT 447
+ + A+ YL + +HRD+ N L++ VKV+DFGLSR + LD + S+
Sbjct: 116 MCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSR-YVLDDEYTSSVGSKF 174
Query: 448 P-GYVDPEYHQCYQLTDKSDVYSFGVVLIELIS--SMP 482
P + PE + + KSD+++FGV++ E+ S MP
Sbjct: 175 PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP 212
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 112/204 (54%), Gaps = 9/204 (4%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLV 341
D + KELG G FG V YGK + +VA+K + + + ++F+ E +++ L H+ LV
Sbjct: 9 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLV 67
Query: 342 SLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHA 401
L+G ++ + + ++ E++ANG + + L +H T + + + + A+ YL +
Sbjct: 68 QLYGVCTK-QRPIFIITEYMANGCLLNYLR--EMRHRFQTQQL-LEMCKDVCEAMEYLES 123
Query: 402 SDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP-GYVDPEYHQCYQ 460
+HRD+ N L++ VKV+DFGLSR + LD + S+ P + PE +
Sbjct: 124 KQFLHRDLAARNCLVNDQGVVKVSDFGLSR-YVLDDEYTSSVGSKFPVRWSPPEVLMYSK 182
Query: 461 LTDKSDVYSFGVVLIELIS--SMP 482
+ KSD+++FGV++ E+ S MP
Sbjct: 183 FSSKSDIWAFGVLMWEIYSLGKMP 206
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 110/199 (55%), Gaps = 7/199 (3%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLV 341
D + KELG G FG V YGK + +VA+K + + + ++F+ E +++ L H+ LV
Sbjct: 24 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLV 82
Query: 342 SLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHA 401
L+G ++ + + ++ E++ANG + + L +H T + + + + A+ YL +
Sbjct: 83 QLYGVCTK-QRPIFIITEYMANGCLLNYLR--EMRHRFQTQQL-LEMCKDVCEAMEYLES 138
Query: 402 SDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP-GYVDPEYHQCYQ 460
+HRD+ N L++ VKV+DFGLSR + LD + S+ P + PE +
Sbjct: 139 KQFLHRDLAARNCLVNDQGVVKVSDFGLSR-YVLDDEYTSSVGSKFPVRWSPPEVLMYSK 197
Query: 461 LTDKSDVYSFGVVLIELIS 479
+ KSD+++FGV++ E+ S
Sbjct: 198 FSSKSDIWAFGVLMWEIYS 216
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 136/295 (46%), Gaps = 34/295 (11%)
Query: 289 ELGDGGFGTVYYGKLKD-GREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCT 347
ELGDG FG VY K K+ G A K + + +E ++ E+EIL H +V L G
Sbjct: 18 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLG-- 75
Query: 348 SRYSQG-LLLVYEFVANGTV-ADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDII 405
+ Y G L ++ EF G V A L DR LT P + + AL +LH+ II
Sbjct: 76 AYYHDGKLWIMIEFCPGGAVDAIMLELDRG----LTEPQIQVVCRQMLEALNFLHSKRII 131
Query: 406 HRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQLTD-- 463
HRD+K N+L+ +++ADFG+S L + GTP ++ PE C + D
Sbjct: 132 HRDLKAGNVLMTLEGDIRLADFGVSA-KNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTP 190
Query: 464 ---KSDVYSFGVVLIELISSMPAVDMNRHRHEINLANLAINKIQKCAFDELIDPCLGFES 520
K+D++S G+ LIE+ P HE+N + + KI K L+ P
Sbjct: 191 YDYKADIWSLGITLIEMAQIEPP------HHELNPMRVLL-KIAKSDPPTLLTPS----- 238
Query: 521 DEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLAE--LQRIKSGKSKFEIHEEKQ 573
+ + + + L +N E RPS ++L + I S K+ E+ E +
Sbjct: 239 -----KWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSITSNKALRELVAEAK 288
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 127/273 (46%), Gaps = 32/273 (11%)
Query: 289 ELGDGGFGTVYYGKLKD-GREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCT 347
ELGDG FG VY K K+ G A K + + +E ++ E+EIL H +V L G
Sbjct: 26 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLG-- 83
Query: 348 SRYSQG-LLLVYEFVANGTV-ADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDII 405
+ Y G L ++ EF G V A L DR LT P + + AL +LH+ II
Sbjct: 84 AYYHDGKLWIMIEFCPGGAVDAIMLELDRG----LTEPQIQVVCRQMLEALNFLHSKRII 139
Query: 406 HRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQLTD-- 463
HRD+K N+L+ +++ADFG+S L + GTP ++ PE C + D
Sbjct: 140 HRDLKAGNVLMTLEGDIRLADFGVSA-KNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTP 198
Query: 464 ---KSDVYSFGVVLIELISSMPAVDMNRHRHEINLANLAINKIQKCAFDELIDPCLGFES 520
K+D++S G+ LIE+ P HE+N + + KI K L+ P
Sbjct: 199 YDYKADIWSLGITLIEMAQIEPP------HHELNPMRVLL-KIAKSDPPTLLTPS----- 246
Query: 521 DEEVKRMTTSVAELAFLCLQQNKELRPSMEEVL 553
+ + + + L +N E RPS ++L
Sbjct: 247 -----KWSVEFRDFLKIALDKNPETRPSAAQLL 274
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 103/196 (52%), Gaps = 21/196 (10%)
Query: 287 EKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
EK+LG G FG V+ +VAVK + + VE F+ E ++ L+H LV L
Sbjct: 187 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMS-VEAFLAEANVMKTLQHDKLVKLHAV 245
Query: 347 TSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDIIH 406
++ + + ++ EF+A G++ D L D L P ++ + + A +A++ + IH
Sbjct: 246 VTK--EPIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIEQRNYIH 301
Query: 407 RDVKTNNILLDSNFCVKVADFGLSRL---FPLDVTHVSTAPQGTPGYVDPEYHQCYQLTD 463
RD++ NIL+ ++ K+ADFGL+R+ FP+ T PE T
Sbjct: 302 RDLRAANILVSASLVCKIADFGLARVGAKFPIKWTA-------------PEAINFGSFTI 348
Query: 464 KSDVYSFGVVLIELIS 479
KSDV+SFG++L+E+++
Sbjct: 349 KSDVWSFGILLMEIVT 364
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 112/204 (54%), Gaps = 9/204 (4%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLV 341
D + KELG G FG V YGK + +VA+K + + + ++F+ E +++ L H+ LV
Sbjct: 9 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLV 67
Query: 342 SLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHA 401
L+G ++ + + ++ E++ANG + + L +H T + + + + A+ YL +
Sbjct: 68 QLYGVCTK-QRPIFIITEYMANGCLLNYLR--EMRHRFQTQQL-LEMCKDVCEAMEYLES 123
Query: 402 SDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP-GYVDPEYHQCYQ 460
+HRD+ N L++ VKV+DFGLSR + LD + S+ P + PE +
Sbjct: 124 KQFLHRDLAARNCLVNDQGVVKVSDFGLSR-YVLDDEYTSSRGSKFPVRWSPPEVLMYSK 182
Query: 461 LTDKSDVYSFGVVLIELIS--SMP 482
+ KSD+++FGV++ E+ S MP
Sbjct: 183 FSSKSDIWAFGVLMWEIYSLGKMP 206
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 109/199 (54%), Gaps = 7/199 (3%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLV 341
D + KELG G FG V YGK + +VA+K + + + ++F+ E +++ L H+ LV
Sbjct: 24 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLV 82
Query: 342 SLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHA 401
L+G ++ + + ++ E++ANG + + L +H T + + + + A+ YL +
Sbjct: 83 QLYGVCTK-QRPIFIITEYMANGCLLNYLR--EMRHRFQTQQL-LEMCKDVCEAMEYLES 138
Query: 402 SDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP-GYVDPEYHQCYQ 460
+HRD+ N L++ VKV+DFGLSR + LD S+ P + PE +
Sbjct: 139 KQFLHRDLAARNCLVNDQGVVKVSDFGLSR-YVLDDEETSSVGSKFPVRWSPPEVLMYSK 197
Query: 461 LTDKSDVYSFGVVLIELIS 479
+ KSD+++FGV++ E+ S
Sbjct: 198 FSSKSDIWAFGVLMWEIYS 216
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 142/286 (49%), Gaps = 36/286 (12%)
Query: 285 SREKELGDGGFGTVYYGKLK--DGRE---VAVKRLYDN--NYRRVEQFMNEVEILTRLRH 337
+R+K +G G FG VY G LK G++ VA+K L +RV+ F+ E I+ + H
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVD-FLGEAGIMGQFSH 105
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
N++ L G S+Y + ++++ E++ NG + L R K G + + + A+ +
Sbjct: 106 HNIIRLEGVISKY-KPMMIITEYMENGALDKFL---REKDGEFSVLQLVGMLRGIAAGMK 161
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLD--VTHVSTAPQGTPGYVDPEY 455
YL + +HRD+ NIL++SN KV+DFGLSR+ D T+ ++ + + PE
Sbjct: 162 YLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEA 221
Query: 456 HQCYQLTDKSDVYSFGVVLIELIS--SMPAVDMNRHRHEINLANLAINKIQKCAFDELID 513
+ T SDV+SFG+V+ E+++ P +++ H ++ K D
Sbjct: 222 ISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH------------EVMKAIND---- 265
Query: 514 PCLGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLAELQRI 559
GF + +++ +L C QQ + RP ++++ L ++
Sbjct: 266 ---GFRLPTPMD-CPSAIYQLMMQCWQQERARRPKFADIVSILDKL 307
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 146/310 (47%), Gaps = 48/310 (15%)
Query: 272 FSYSDLAEATNDFSREKEL---------GDGGFGTVYYGKLK--DGRE--VAVKRL---Y 315
F++ D EA +F++E ++ G G FG V G LK RE VA+K L Y
Sbjct: 14 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 73
Query: 316 DNNYRRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRA 375
RR F++E I+ + H N++ L G ++ S ++++ EF+ NG++ L R
Sbjct: 74 TEKQRR--DFLSEASIMGQFDHPNVIHLEGVVTK-STPVMIITEFMENGSLDSFL---RQ 127
Query: 376 KHGLLTWPIRMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPL 435
G T + + A+ + YL + +HRD+ NIL++SN KV+DFGLSR
Sbjct: 128 NDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLED 187
Query: 436 DV---THVSTAPQGTP-GYVDPEYHQCYQLTDKSDVYSFGVVLIELIS--SMPAVDMNRH 489
D T+ S P + PE Q + T SDV+S+G+V+ E++S P DM
Sbjct: 188 DTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQ 247
Query: 490 RHEINLANLAINKIQKCAFDELIDPCLGFESDEEVKRMTTSVAELAFLCLQQNKELRPSM 549
IN I++ D + P + S ++ +L C Q+++ RP
Sbjct: 248 D--------VINAIEQ---DYRLPPPMDCPS---------ALHQLMLDCWQKDRNHRPKF 287
Query: 550 EEVLAELQRI 559
+++ L ++
Sbjct: 288 GQIVNTLDKM 297
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 102/202 (50%), Gaps = 15/202 (7%)
Query: 288 KELGDGGFGTV---YYGKLKD--GREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVS 342
++LG G FG+V Y L+D G VAVK+L + + F E+EIL L+H N+V
Sbjct: 19 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 343 LFG-CTSRYSQGLLLVYEFVANGTVAD--QLHGDRAKHGLLTWPIRMNIAIETASALAYL 399
G C S + L L+ E++ G++ D Q H +R H L + + + YL
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKL-----LQYTSQICKGMEYL 133
Query: 400 HASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPG--YVDPEYHQ 457
IHRD+ T NIL+++ VK+ DFGL+++ P D G + PE
Sbjct: 134 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 193
Query: 458 CYQLTDKSDVYSFGVVLIELIS 479
+ + SDV+SFGVVL EL +
Sbjct: 194 ESKFSVASDVWSFGVVLYELFT 215
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 102/202 (50%), Gaps = 15/202 (7%)
Query: 288 KELGDGGFGTV---YYGKLKD--GREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVS 342
++LG G FG+V Y L+D G VAVK+L + + F E+EIL L+H N+V
Sbjct: 19 RQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 343 LFG-CTSRYSQGLLLVYEFVANGTVAD--QLHGDRAKHGLLTWPIRMNIAIETASALAYL 399
G C S + L L+ EF+ G++ + Q H +R H L + + + YL
Sbjct: 79 YKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKL-----LQYTSQICKGMEYL 133
Query: 400 HASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPG--YVDPEYHQ 457
IHRD+ T NIL+++ VK+ DFGL+++ P D G + PE
Sbjct: 134 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 193
Query: 458 CYQLTDKSDVYSFGVVLIELIS 479
+ + SDV+SFGVVL EL +
Sbjct: 194 ESKFSVASDVWSFGVVLYELFT 215
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 102/202 (50%), Gaps = 15/202 (7%)
Query: 288 KELGDGGFGTV---YYGKLKD--GREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVS 342
++LG G FG+V Y L+D G VAVK+L + + F E+EIL L+H N+V
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 343 LFG-CTSRYSQGLLLVYEFVANGTVAD--QLHGDRAKHGLLTWPIRMNIAIETASALAYL 399
G C S + L L+ E++ G++ D Q H +R H L + + + YL
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYL 130
Query: 400 HASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPG--YVDPEYHQ 457
IHRD+ T NIL+++ VK+ DFGL+++ P D G + PE
Sbjct: 131 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 190
Query: 458 CYQLTDKSDVYSFGVVLIELIS 479
+ + SDV+SFGVVL EL +
Sbjct: 191 ESKFSVASDVWSFGVVLYELFT 212
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 102/202 (50%), Gaps = 15/202 (7%)
Query: 288 KELGDGGFGTV---YYGKLKD--GREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVS 342
++LG G FG+V Y L+D G VAVK+L + + F E+EIL L+H N+V
Sbjct: 15 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 74
Query: 343 LFG-CTSRYSQGLLLVYEFVANGTVAD--QLHGDRAKHGLLTWPIRMNIAIETASALAYL 399
G C S + L L+ E++ G++ D Q H +R H L + + + YL
Sbjct: 75 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYL 129
Query: 400 HASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPG--YVDPEYHQ 457
IHRD+ T NIL+++ VK+ DFGL+++ P D G + PE
Sbjct: 130 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 189
Query: 458 CYQLTDKSDVYSFGVVLIELIS 479
+ + SDV+SFGVVL EL +
Sbjct: 190 ESKFSVASDVWSFGVVLYELFT 211
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 102/202 (50%), Gaps = 15/202 (7%)
Query: 288 KELGDGGFGTV---YYGKLKD--GREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVS 342
++LG G FG+V Y L+D G VAVK+L + + F E+EIL L+H N+V
Sbjct: 20 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 79
Query: 343 LFG-CTSRYSQGLLLVYEFVANGTVAD--QLHGDRAKHGLLTWPIRMNIAIETASALAYL 399
G C S + L L+ E++ G++ D Q H +R H L + + + YL
Sbjct: 80 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYL 134
Query: 400 HASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPG--YVDPEYHQ 457
IHRD+ T NIL+++ VK+ DFGL+++ P D G + PE
Sbjct: 135 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 194
Query: 458 CYQLTDKSDVYSFGVVLIELIS 479
+ + SDV+SFGVVL EL +
Sbjct: 195 ESKFSVASDVWSFGVVLYELFT 216
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 102/202 (50%), Gaps = 15/202 (7%)
Query: 288 KELGDGGFGTV---YYGKLKD--GREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVS 342
++LG G FG+V Y L+D G VAVK+L + + F E+EIL L+H N+V
Sbjct: 19 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 343 LFG-CTSRYSQGLLLVYEFVANGTVAD--QLHGDRAKHGLLTWPIRMNIAIETASALAYL 399
G C S + L L+ E++ G++ D Q H +R H L + + + YL
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYL 133
Query: 400 HASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPG--YVDPEYHQ 457
IHRD+ T NIL+++ VK+ DFGL+++ P D G + PE
Sbjct: 134 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 193
Query: 458 CYQLTDKSDVYSFGVVLIELIS 479
+ + SDV+SFGVVL EL +
Sbjct: 194 ESKFSVASDVWSFGVVLYELFT 215
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 102/202 (50%), Gaps = 15/202 (7%)
Query: 288 KELGDGGFGTV---YYGKLKD--GREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVS 342
++LG G FG+V Y L+D G VAVK+L + + F E+EIL L+H N+V
Sbjct: 47 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 106
Query: 343 LFG-CTSRYSQGLLLVYEFVANGTVAD--QLHGDRAKHGLLTWPIRMNIAIETASALAYL 399
G C S + L L+ E++ G++ D Q H +R H L + + + YL
Sbjct: 107 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYL 161
Query: 400 HASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPG--YVDPEYHQ 457
IHRD+ T NIL+++ VK+ DFGL+++ P D G + PE
Sbjct: 162 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 221
Query: 458 CYQLTDKSDVYSFGVVLIELIS 479
+ + SDV+SFGVVL EL +
Sbjct: 222 ESKFSVASDVWSFGVVLYELFT 243
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 102/202 (50%), Gaps = 15/202 (7%)
Query: 288 KELGDGGFGTV---YYGKLKD--GREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVS 342
++LG G FG+V Y L+D G VAVK+L + + F E+EIL L+H N+V
Sbjct: 22 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 81
Query: 343 LFG-CTSRYSQGLLLVYEFVANGTVAD--QLHGDRAKHGLLTWPIRMNIAIETASALAYL 399
G C S + L L+ E++ G++ D Q H +R H L + + + YL
Sbjct: 82 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYL 136
Query: 400 HASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPG--YVDPEYHQ 457
IHRD+ T NIL+++ VK+ DFGL+++ P D G + PE
Sbjct: 137 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 196
Query: 458 CYQLTDKSDVYSFGVVLIELIS 479
+ + SDV+SFGVVL EL +
Sbjct: 197 ESKFSVASDVWSFGVVLYELFT 218
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 102/202 (50%), Gaps = 15/202 (7%)
Query: 288 KELGDGGFGTV---YYGKLKD--GREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVS 342
++LG G FG+V Y L+D G VAVK+L + + F E+EIL L+H N+V
Sbjct: 23 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 82
Query: 343 LFG-CTSRYSQGLLLVYEFVANGTVAD--QLHGDRAKHGLLTWPIRMNIAIETASALAYL 399
G C S + L L+ E++ G++ D Q H +R H L + + + YL
Sbjct: 83 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYL 137
Query: 400 HASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPG--YVDPEYHQ 457
IHRD+ T NIL+++ VK+ DFGL+++ P D G + PE
Sbjct: 138 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 197
Query: 458 CYQLTDKSDVYSFGVVLIELIS 479
+ + SDV+SFGVVL EL +
Sbjct: 198 ESKFSVASDVWSFGVVLYELFT 219
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 102/202 (50%), Gaps = 15/202 (7%)
Query: 288 KELGDGGFGTV---YYGKLKD--GREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVS 342
++LG G FG+V Y L+D G VAVK+L + + F E+EIL L+H N+V
Sbjct: 14 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 73
Query: 343 LFG-CTSRYSQGLLLVYEFVANGTVAD--QLHGDRAKHGLLTWPIRMNIAIETASALAYL 399
G C S + L L+ E++ G++ D Q H +R H L + + + YL
Sbjct: 74 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYL 128
Query: 400 HASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPG--YVDPEYHQ 457
IHRD+ T NIL+++ VK+ DFGL+++ P D G + PE
Sbjct: 129 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 188
Query: 458 CYQLTDKSDVYSFGVVLIELIS 479
+ + SDV+SFGVVL EL +
Sbjct: 189 ESKFSVASDVWSFGVVLYELFT 210
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 102/202 (50%), Gaps = 15/202 (7%)
Query: 288 KELGDGGFGTV---YYGKLKD--GREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVS 342
++LG G FG+V Y L+D G VAVK+L + + F E+EIL L+H N+V
Sbjct: 21 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 80
Query: 343 LFG-CTSRYSQGLLLVYEFVANGTVAD--QLHGDRAKHGLLTWPIRMNIAIETASALAYL 399
G C S + L L+ E++ G++ D Q H +R H L + + + YL
Sbjct: 81 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYL 135
Query: 400 HASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPG--YVDPEYHQ 457
IHRD+ T NIL+++ VK+ DFGL+++ P D G + PE
Sbjct: 136 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 195
Query: 458 CYQLTDKSDVYSFGVVLIELIS 479
+ + SDV+SFGVVL EL +
Sbjct: 196 ESKFSVASDVWSFGVVLYELFT 217
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 102/202 (50%), Gaps = 15/202 (7%)
Query: 288 KELGDGGFGTV---YYGKLKD--GREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVS 342
++LG G FG+V Y L+D G VAVK+L + + F E+EIL L+H N+V
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 343 LFG-CTSRYSQGLLLVYEFVANGTVAD--QLHGDRAKHGLLTWPIRMNIAIETASALAYL 399
G C S + L L+ E++ G++ D Q H +R H L + + + YL
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYL 130
Query: 400 HASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPG--YVDPEYHQ 457
IHRD+ T NIL+++ VK+ DFGL+++ P D G + PE
Sbjct: 131 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLT 190
Query: 458 CYQLTDKSDVYSFGVVLIELIS 479
+ + SDV+SFGVVL EL +
Sbjct: 191 ESKFSVASDVWSFGVVLYELFT 212
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 102/202 (50%), Gaps = 15/202 (7%)
Query: 288 KELGDGGFGTV---YYGKLKD--GREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVS 342
++LG G FG+V Y L+D G VAVK+L + + F E+EIL L+H N+V
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 343 LFG-CTSRYSQGLLLVYEFVANGTVAD--QLHGDRAKHGLLTWPIRMNIAIETASALAYL 399
G C S + L L+ E++ G++ D Q H +R H L + + + YL
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYL 130
Query: 400 HASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPG--YVDPEYHQ 457
IHRD+ T NIL+++ VK+ DFGL+++ P D G + PE
Sbjct: 131 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 190
Query: 458 CYQLTDKSDVYSFGVVLIELIS 479
+ + SDV+SFGVVL EL +
Sbjct: 191 ESKFSVASDVWSFGVVLYELFT 212
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 109/217 (50%), Gaps = 21/217 (9%)
Query: 282 NDFSREKELGDGGFGTVYYGKL------KDGREVAVKRLYDNNYRRVEQFMNEVEILTRL 335
D + ELG+G FG V+ + +D VAVK L + + + F E E+LT L
Sbjct: 18 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTML 77
Query: 336 RHKNLVSLFG-CTSRYSQGLLLVYEFVANGTVADQL--HGDRAK---------HGLLTWP 383
+H+++V FG CT + LL+V+E++ +G + L HG AK G L
Sbjct: 78 QHQHIVRFFGVCTE--GRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLG 135
Query: 384 IRMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSR-LFPLDVTHVST 442
+ +A + A+ + YL +HRD+ T N L+ VK+ DFG+SR ++ D V
Sbjct: 136 QLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGG 195
Query: 443 APQGTPGYVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
++ PE + T +SDV+SFGVVL E+ +
Sbjct: 196 RTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 232
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 102/202 (50%), Gaps = 15/202 (7%)
Query: 288 KELGDGGFGTV---YYGKLKD--GREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVS 342
++LG G FG+V Y L+D G VAVK+L + + F E+EIL L+H N+V
Sbjct: 34 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 343 LFG-CTSRYSQGLLLVYEFVANGTVAD--QLHGDRAKHGLLTWPIRMNIAIETASALAYL 399
G C S + L L+ E++ G++ D Q H +R H L + + + YL
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYL 148
Query: 400 HASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPG--YVDPEYHQ 457
IHRD+ T NIL+++ VK+ DFGL+++ P D G + PE
Sbjct: 149 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 208
Query: 458 CYQLTDKSDVYSFGVVLIELIS 479
+ + SDV+SFGVVL EL +
Sbjct: 209 ESKFSVASDVWSFGVVLYELFT 230
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 109/217 (50%), Gaps = 21/217 (9%)
Query: 282 NDFSREKELGDGGFGTVYYGKL------KDGREVAVKRLYDNNYRRVEQFMNEVEILTRL 335
D + ELG+G FG V+ + +D VAVK L + + + F E E+LT L
Sbjct: 12 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTML 71
Query: 336 RHKNLVSLFG-CTSRYSQGLLLVYEFVANGTVADQL--HGDRAK---------HGLLTWP 383
+H+++V FG CT + LL+V+E++ +G + L HG AK G L
Sbjct: 72 QHQHIVRFFGVCTE--GRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLG 129
Query: 384 IRMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSR-LFPLDVTHVST 442
+ +A + A+ + YL +HRD+ T N L+ VK+ DFG+SR ++ D V
Sbjct: 130 QLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGG 189
Query: 443 APQGTPGYVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
++ PE + T +SDV+SFGVVL E+ +
Sbjct: 190 RTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 226
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 102/202 (50%), Gaps = 15/202 (7%)
Query: 288 KELGDGGFGTV---YYGKLKD--GREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVS 342
++LG G FG+V Y L+D G VAVK+L + + F E+EIL L+H N+V
Sbjct: 34 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 343 LFG-CTSRYSQGLLLVYEFVANGTVAD--QLHGDRAKHGLLTWPIRMNIAIETASALAYL 399
G C S + L L+ E++ G++ D Q H +R H L + + + YL
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYL 148
Query: 400 HASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPG--YVDPEYHQ 457
IHRD+ T NIL+++ VK+ DFGL+++ P D G + PE
Sbjct: 149 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 208
Query: 458 CYQLTDKSDVYSFGVVLIELIS 479
+ + SDV+SFGVVL EL +
Sbjct: 209 ESKFSVASDVWSFGVVLYELFT 230
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 109/217 (50%), Gaps = 21/217 (9%)
Query: 282 NDFSREKELGDGGFGTVYYGKL------KDGREVAVKRLYDNNYRRVEQFMNEVEILTRL 335
D + ELG+G FG V+ + +D VAVK L + + + F E E+LT L
Sbjct: 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTML 100
Query: 336 RHKNLVSLFG-CTSRYSQGLLLVYEFVANGTVADQL--HGDRAK---------HGLLTWP 383
+H+++V FG CT + LL+V+E++ +G + L HG AK G L
Sbjct: 101 QHQHIVRFFGVCTE--GRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLG 158
Query: 384 IRMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSR-LFPLDVTHVST 442
+ +A + A+ + YL +HRD+ T N L+ VK+ DFG+SR ++ D V
Sbjct: 159 QLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGG 218
Query: 443 APQGTPGYVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
++ PE + T +SDV+SFGVVL E+ +
Sbjct: 219 RTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 255
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 106/208 (50%), Gaps = 9/208 (4%)
Query: 272 FSYSDLAEATNDFSREKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEI 331
F S A + + +G G FG V G + G +VAVK + N + F+ E +
Sbjct: 183 FYRSGWALNMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCI--KNDATAQAFLAEASV 239
Query: 332 LTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIE 391
+T+LRH NLV L G GL +V E++A G++ D L R + +L + +++
Sbjct: 240 MTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLR-SRGR-SVLGGDCLLKFSLD 297
Query: 392 TASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYV 451
A+ YL ++ +HRD+ N+L+ + KV+DFGL++ + + + +
Sbjct: 298 VCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWT 353
Query: 452 DPEYHQCYQLTDKSDVYSFGVVLIELIS 479
PE + + + KSDV+SFG++L E+ S
Sbjct: 354 APEALREKKFSTKSDVWSFGILLWEIYS 381
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 103/202 (50%), Gaps = 15/202 (7%)
Query: 288 KELGDGGFGTV---YYGKLKD--GREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVS 342
++LG G FG+V Y L+D G VAVK+L + + F E+EIL L+H N+V
Sbjct: 17 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 76
Query: 343 LFG-CTSRYSQGLLLVYEFVANGTVAD--QLHGDRAKHGLLTWPIRMNIAIETASALAYL 399
G C S + L L+ E++ G++ D Q H +R H L + + + YL
Sbjct: 77 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYL 131
Query: 400 HASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPG--YVDPEYHQ 457
IHR++ T NIL+++ VK+ DFGL+++ P D + G + PE
Sbjct: 132 GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLT 191
Query: 458 CYQLTDKSDVYSFGVVLIELIS 479
+ + SDV+SFGVVL EL +
Sbjct: 192 ESKFSVASDVWSFGVVLYELFT 213
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 106/208 (50%), Gaps = 9/208 (4%)
Query: 272 FSYSDLAEATNDFSREKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEI 331
F S A + + +G G FG V G + G +VAVK + N + F+ E +
Sbjct: 11 FYRSGWALNMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCI--KNDATAQAFLAEASV 67
Query: 332 LTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIE 391
+T+LRH NLV L G GL +V E++A G++ D L R + +L + +++
Sbjct: 68 MTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLR-SRGR-SVLGGDCLLKFSLD 125
Query: 392 TASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYV 451
A+ YL ++ +HRD+ N+L+ + KV+DFGL++ + + + +
Sbjct: 126 VCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWT 181
Query: 452 DPEYHQCYQLTDKSDVYSFGVVLIELIS 479
PE + + + KSDV+SFG++L E+ S
Sbjct: 182 APEALREKKFSTKSDVWSFGILLWEIYS 209
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 101/190 (53%), Gaps = 9/190 (4%)
Query: 290 LGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCTSR 349
+G G FG V G + G +VAVK + N + F+ E ++T+LRH NLV L G
Sbjct: 14 IGKGEFGDVMLGDYR-GNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 70
Query: 350 YSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDIIHRDV 409
GL +V E++A G++ D L R + +L + +++ A+ YL ++ +HRD+
Sbjct: 71 EKGGLYIVTEYMAKGSLVDYLR-SRGR-SVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDL 128
Query: 410 KTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQLTDKSDVYS 469
N+L+ + KV+DFGL++ + + + + PE + + + KSDV+S
Sbjct: 129 AARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWS 184
Query: 470 FGVVLIELIS 479
FG++L E+ S
Sbjct: 185 FGILLWEIYS 194
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 140/298 (46%), Gaps = 45/298 (15%)
Query: 287 EKELGDGGFGTVYYGKLKD-GRE---VAVKRL---YDNNYRRVEQFMNEVEILTRLRHKN 339
E+ +G G FG V G+LK G++ VA+K L Y RR +F++E I+ + H N
Sbjct: 19 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRR--EFLSEASIMGQFEHPN 76
Query: 340 LVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYL 399
++ L G + S ++++ EF+ NG + L R G T + + AS + YL
Sbjct: 77 IIRLEGVVTN-SMPVMILTEFMENGALDSFL---RLNDGQFTVIQLVGMLRGIASGMRYL 132
Query: 400 HASDIIHRDVKTNNILLDSNFCVKVADFGLSRLF---PLDVTHVSTAPQGTP-GYVDPEY 455
+HRD+ NIL++SN KV+DFGLSR D T+ S+ P + PE
Sbjct: 133 AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEA 192
Query: 456 HQCYQLTDKSDVYSFGVVLIELIS--SMPAVDMNRHRHEINLANLAINKIQKCAFDELID 513
+ T SD +S+G+V+ E++S P DM+ IN I++ D +
Sbjct: 193 IAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQD--------VINAIEQ---DYRLP 241
Query: 514 P---CLGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLAELQRIKSGKSKFEI 568
P C TS+ +L C Q+++ RP +V++ L ++ + +I
Sbjct: 242 PPPDC------------PTSLHQLMLDCWQKDRNARPRFPQVVSALDKMIRNPASLKI 287
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 146/318 (45%), Gaps = 54/318 (16%)
Query: 276 DLAEATNDFSREKE---------LGDGGFGTVYYGKLKD-GRE---VAVKRL---YDNNY 319
D EA +F++E + +G G FG V G+LK G++ VA+K L Y
Sbjct: 1 DPNEAVREFAKEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQ 60
Query: 320 RRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGL 379
RR +F++E I+ + H N++ L G + S ++++ EF+ NG + L R G
Sbjct: 61 RR--EFLSEASIMGQFEHPNIIRLEGVVTN-SMPVMILTEFMENGALDSFL---RLNDGQ 114
Query: 380 LTWPIRMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLF---PLD 436
T + + AS + YL +HRD+ NIL++SN KV+DFGLSR D
Sbjct: 115 FTVIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSD 174
Query: 437 VTHVSTAPQGTP-GYVDPEYHQCYQLTDKSDVYSFGVVLIELIS--SMPAVDMNRHRHEI 493
T S+ P + PE + T SD +S+G+V+ E++S P DM+
Sbjct: 175 PTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQD--- 231
Query: 494 NLANLAINKIQKCAFDELIDP---CLGFESDEEVKRMTTSVAELAFLCLQQNKELRPSME 550
IN I++ D + P C TS+ +L C Q+++ RP
Sbjct: 232 -----VINAIEQ---DYRLPPPPDC------------PTSLHQLMLDCWQKDRNARPRFP 271
Query: 551 EVLAELQRIKSGKSKFEI 568
+V++ L ++ + +I
Sbjct: 272 QVVSALDKMIRNPASLKI 289
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 132/272 (48%), Gaps = 27/272 (9%)
Query: 290 LGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCTSR 349
+G G FG V G + G +VAVK + N + F+ E ++T+LRH NLV L G
Sbjct: 20 IGKGEFGDVMLGDYR-GNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 76
Query: 350 YSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDIIHRDV 409
GL +V E++A G++ D L R + +L + +++ A+ YL ++ +HRD+
Sbjct: 77 EKGGLYIVTEYMAKGSLVDYLR-SRGRS-VLGGDCLLKFSLDVCEAMEYLEGNNFVHRDL 134
Query: 410 KTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQLTDKSDVYS 469
N+L+ + KV+DFGL++ + + + + PE + + KSDV+S
Sbjct: 135 AARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWTAPEALREAAFSTKSDVWS 190
Query: 470 FGVVLIELISSMPAVDMNRHRHEINLANLAINKIQKCAFDELIDPCLGFESDEEVKRMTT 529
FG++L E I S V R I L ++ + +++K + D C
Sbjct: 191 FGILLWE-IYSFGRVPYPR----IPLKDV-VPRVEKGYKMDAPDGC------------PP 232
Query: 530 SVAELAFLCLQQNKELRPSMEEVLAELQRIKS 561
+V E+ C + +RPS ++ +L+ IK+
Sbjct: 233 AVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT 264
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 115/235 (48%), Gaps = 26/235 (11%)
Query: 273 SYSDLAEATNDFSRE---------KELGDGGFGTVYYGKLK--DGREVAV-----KRLYD 316
+Y D A + F++E + +G G FG V G+LK R+VAV K Y
Sbjct: 25 TYEDPNRAVHQFAKELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYT 84
Query: 317 NNYRRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAK 376
RR F+ E I+ + H N+V L G +R + +++V EF+ NG + L R
Sbjct: 85 EKQRR--DFLCEASIMGQFDHPNVVHLEGVVTR-GKPVMIVIEFMENGALDAFL---RKH 138
Query: 377 HGLLTWPIRMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLD 436
G T + + A+ + YL +HRD+ NIL++SN KV+DFGLSR+ D
Sbjct: 139 DGQFTVIQLVGMLRGIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDD 198
Query: 437 VTHVSTAPQGT--PGYVDPEYHQCYQLTDKSDVYSFGVVLIELIS--SMPAVDMN 487
V T G + PE Q + T SDV+S+G+V+ E++S P DM+
Sbjct: 199 PEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMS 253
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 103/193 (53%), Gaps = 7/193 (3%)
Query: 288 KELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCT 347
+ LG G FG V+ G +VAVK L + + F+ E ++ +L+H+ LV L+
Sbjct: 27 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS-PDAFLAEANLMKQLQHQRLVRLYAVV 85
Query: 348 SRYSQGLLLVYEFVANGTVADQLHGDRAKHGL-LTWPIRMNIAIETASALAYLHASDIIH 406
++ + + ++ E++ NG++ D L + G+ LT +++A + A +A++ + IH
Sbjct: 86 TQ--EPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIH 140
Query: 407 RDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQLTDKSD 466
RD++ NIL+ K+ADFGL+RL + + + PE T KSD
Sbjct: 141 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 200
Query: 467 VYSFGVVLIELIS 479
V+SFG++L E+++
Sbjct: 201 VWSFGILLTEIVT 213
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 103/193 (53%), Gaps = 7/193 (3%)
Query: 288 KELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCT 347
+ LG G FG V+ G +VAVK L + + F+ E ++ +L+H+ LV L+
Sbjct: 25 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS-PDAFLAEANLMKQLQHQRLVRLYAVV 83
Query: 348 SRYSQGLLLVYEFVANGTVADQLHGDRAKHGL-LTWPIRMNIAIETASALAYLHASDIIH 406
++ + + ++ E++ NG++ D L + G+ LT +++A + A +A++ + IH
Sbjct: 84 TQ--EPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIH 138
Query: 407 RDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQLTDKSD 466
RD++ NIL+ K+ADFGL+RL + + + PE T KSD
Sbjct: 139 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 198
Query: 467 VYSFGVVLIELIS 479
V+SFG++L E+++
Sbjct: 199 VWSFGILLTEIVT 211
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 103/193 (53%), Gaps = 7/193 (3%)
Query: 288 KELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCT 347
+ LG G FG V+ G +VAVK L + + F+ E ++ +L+H+ LV L+
Sbjct: 28 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVV 86
Query: 348 SRYSQGLLLVYEFVANGTVADQLHGDRAKHGL-LTWPIRMNIAIETASALAYLHASDIIH 406
++ + + ++ E++ NG++ D L + G+ LT +++A + A +A++ + IH
Sbjct: 87 TQ--EPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIH 141
Query: 407 RDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQLTDKSD 466
RD++ NIL+ K+ADFGL+RL + + + PE T KSD
Sbjct: 142 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 201
Query: 467 VYSFGVVLIELIS 479
V+SFG++L E+++
Sbjct: 202 VWSFGILLTEIVT 214
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 86/280 (30%), Positives = 132/280 (47%), Gaps = 26/280 (9%)
Query: 289 ELGDGGFGTVYYGKLKDGREVAVKRLYDN-NYRRVEQFMNEVEILTRLRHKNLVSLFGCT 347
ELGD FG VY + K+ +A ++ D + +E +M E++IL H N+V L
Sbjct: 19 ELGD--FGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 76
Query: 348 SRYSQGLLLVYEFVANGTV-ADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDIIH 406
Y L ++ EF A G V A L +R LT + +T AL YLH + IIH
Sbjct: 77 -YYENNLWILIEFCAGGAVDAVMLELERP----LTESQIQVVCKQTLDALNYLHDNKIIH 131
Query: 407 RDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQLTD--- 463
RD+K NIL + +K+ADFG+S + GTP ++ PE C D
Sbjct: 132 RDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPY 191
Query: 464 --KSDVYSFGVVLIELIS-SMPAVDMNRHRHEINLA-----NLAINKIQKCAFDELIDPC 515
K+DV+S G+ LIE+ P ++N R + +A LA F + + C
Sbjct: 192 DYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKC 251
Query: 516 LGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLAE 555
L E + + + T+ + + F+ + NK +R E++AE
Sbjct: 252 L--EKNVDARWTTSQLLQHPFVTVDSNKPIR----ELIAE 285
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 103/193 (53%), Gaps = 7/193 (3%)
Query: 288 KELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCT 347
+ LG G FG V+ G +VAVK L + + F+ E ++ +L+H+ LV L+
Sbjct: 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 348 SRYSQGLLLVYEFVANGTVADQLHGDRAKHGL-LTWPIRMNIAIETASALAYLHASDIIH 406
++ + + ++ E++ NG++ D L + G+ LT +++A + A +A++ + IH
Sbjct: 78 TQ--EPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIH 132
Query: 407 RDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQLTDKSD 466
RD++ NIL+ K+ADFGL+RL + + + PE T KSD
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 192
Query: 467 VYSFGVVLIELIS 479
V+SFG++L E+++
Sbjct: 193 VWSFGILLTEIVT 205
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 103/193 (53%), Gaps = 7/193 (3%)
Query: 288 KELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCT 347
+ LG G FG V+ G +VAVK L + + F+ E ++ +L+H+ LV L+
Sbjct: 21 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVV 79
Query: 348 SRYSQGLLLVYEFVANGTVADQLHGDRAKHGL-LTWPIRMNIAIETASALAYLHASDIIH 406
++ + + ++ E++ NG++ D L + G+ LT +++A + A +A++ + IH
Sbjct: 80 TQ--EPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIH 134
Query: 407 RDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQLTDKSD 466
RD++ NIL+ K+ADFGL+RL + + + PE T KSD
Sbjct: 135 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 194
Query: 467 VYSFGVVLIELIS 479
V+SFG++L E+++
Sbjct: 195 VWSFGILLTEIVT 207
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 103/193 (53%), Gaps = 7/193 (3%)
Query: 288 KELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCT 347
+ LG G FG V+ G +VAVK L + + F+ E ++ +L+H+ LV L+
Sbjct: 20 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVV 78
Query: 348 SRYSQGLLLVYEFVANGTVADQLHGDRAKHGL-LTWPIRMNIAIETASALAYLHASDIIH 406
++ + + ++ E++ NG++ D L + G+ LT +++A + A +A++ + IH
Sbjct: 79 TQ--EPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIH 133
Query: 407 RDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQLTDKSD 466
RD++ NIL+ K+ADFGL+RL + + + PE T KSD
Sbjct: 134 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 193
Query: 467 VYSFGVVLIELIS 479
V+SFG++L E+++
Sbjct: 194 VWSFGILLTEIVT 206
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 103/193 (53%), Gaps = 7/193 (3%)
Query: 288 KELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCT 347
+ LG G FG V+ G +VAVK L + + F+ E ++ +L+H+ LV L+
Sbjct: 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 348 SRYSQGLLLVYEFVANGTVADQLHGDRAKHGL-LTWPIRMNIAIETASALAYLHASDIIH 406
++ + + ++ E++ NG++ D L + G+ LT +++A + A +A++ + IH
Sbjct: 78 TQ--EPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIH 132
Query: 407 RDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQLTDKSD 466
RD++ NIL+ K+ADFGL+RL + + + PE T KSD
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 192
Query: 467 VYSFGVVLIELIS 479
V+SFG++L E+++
Sbjct: 193 VWSFGILLTEIVT 205
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 138/310 (44%), Gaps = 46/310 (14%)
Query: 271 IFSYSDLAEATNDFSREK-----ELGDGGFGTVYYGKLKD------GREVAVKRLYDN-N 318
+F S + SREK ELG G FG VY G +D VAVK + ++ +
Sbjct: 1 VFPSSVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESAS 60
Query: 319 YRRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAK-- 376
R +F+NE ++ ++V L G S+ Q L+V E +A+G + L R +
Sbjct: 61 LRERIEFLNEASVMKGFTCHHVVRLLGVVSK-GQPTLVVMELMAHGDLKSYLRSLRPEAE 119
Query: 377 ----HGLLTWPIRMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRL 432
T + +A E A +AYL+A +HRD+ N ++ +F VK+ DFG++R
Sbjct: 120 NNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR- 178
Query: 433 FPLDVTHVSTAPQGTPG-----YVDPEYHQCYQLTDKSDVYSFGVVLIELISSMPAVDMN 487
D+ +G G ++ PE + T SD++SFGVVL E+ S
Sbjct: 179 ---DIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS-------- 227
Query: 488 RHRHEINLANLAINKIQKCAFDELIDPCLGFESDEEVKRMTTSVAELAFLCLQQNKELRP 547
LA Q + ++++ + ++ V +L +C Q N ++RP
Sbjct: 228 ----------LAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRP 277
Query: 548 SMEEVLAELQ 557
+ E++ L+
Sbjct: 278 TFLEIVNLLK 287
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 103/193 (53%), Gaps = 7/193 (3%)
Query: 288 KELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCT 347
+ LG G FG V+ G +VAVK L + + F+ E ++ +L+H+ LV L+
Sbjct: 29 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS-PDAFLAEANLMKQLQHQRLVRLYAVV 87
Query: 348 SRYSQGLLLVYEFVANGTVADQLHGDRAKHGL-LTWPIRMNIAIETASALAYLHASDIIH 406
++ + + ++ E++ NG++ D L + G+ LT +++A + A +A++ + IH
Sbjct: 88 TQ--EPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIH 142
Query: 407 RDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQLTDKSD 466
RD++ NIL+ K+ADFGL+RL + + + PE T KSD
Sbjct: 143 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 202
Query: 467 VYSFGVVLIELIS 479
V+SFG++L E+++
Sbjct: 203 VWSFGILLTEIVT 215
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 103/193 (53%), Gaps = 7/193 (3%)
Query: 288 KELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCT 347
+ LG G FG V+ G +VAVK L + + F+ E ++ +L+H+ LV L+
Sbjct: 24 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVV 82
Query: 348 SRYSQGLLLVYEFVANGTVADQLHGDRAKHGL-LTWPIRMNIAIETASALAYLHASDIIH 406
++ + + ++ E++ NG++ D L + G+ LT +++A + A +A++ + IH
Sbjct: 83 TQ--EPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIH 137
Query: 407 RDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQLTDKSD 466
RD++ NIL+ K+ADFGL+RL + + + PE T KSD
Sbjct: 138 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 197
Query: 467 VYSFGVVLIELIS 479
V+SFG++L E+++
Sbjct: 198 VWSFGILLTEIVT 210
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 103/193 (53%), Gaps = 7/193 (3%)
Query: 288 KELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCT 347
+ LG G FG V+ G +VAVK L + + F+ E ++ +L+H+ LV L+
Sbjct: 25 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVV 83
Query: 348 SRYSQGLLLVYEFVANGTVADQLHGDRAKHGL-LTWPIRMNIAIETASALAYLHASDIIH 406
++ + + ++ E++ NG++ D L + G+ LT +++A + A +A++ + IH
Sbjct: 84 TQ--EPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIH 138
Query: 407 RDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQLTDKSD 466
RD++ NIL+ K+ADFGL+RL + + + PE T KSD
Sbjct: 139 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 198
Query: 467 VYSFGVVLIELIS 479
V+SFG++L E+++
Sbjct: 199 VWSFGILLTEIVT 211
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 130/286 (45%), Gaps = 41/286 (14%)
Query: 290 LGDGGFGTVYYGKL--KDGREV--AVKRLYD-NNYRRVEQFMNEVEILTRLRHKNLVSLF 344
+G G FG VY+G L DG+++ AVK L + V QF+ E I+ H N++SL
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 345 GCTSRYSQGLLLVYEFVANGT----VADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
G R L+V ++ +G + ++ H K + ++ A + +L
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD-------LIGFGLQVAKGMKFLA 150
Query: 401 ASDIIHRDVKTNNILLDSNFCVKVADFGLSRLF---PLDVTHVSTAPQGTPGYVDPEYHQ 457
+ +HRD+ N +LD F VKVADFGL+R D H T + ++ E Q
Sbjct: 151 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 210
Query: 458 CYQLTDKSDVYSFGVVLIELIS--SMPAVDMNRHRHEINLANLAINKIQKCAFDELIDPC 515
+ T KSDV+SFGV+L EL++ + P D +N ++ + +Q L+ P
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMTRGAPPYPD-------VNTFDITVYLLQG---RRLLQP- 259
Query: 516 LGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLAELQRIKS 561
+ + E+ C E+RPS E+++ + I S
Sbjct: 260 ---------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 296
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 107/209 (51%), Gaps = 17/209 (8%)
Query: 287 EKELGDGGFGTVYYGKL------KDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNL 340
++ELG+G FG V+ + +D VAVK L D + + F E E+LT L+H+++
Sbjct: 18 KRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHI 77
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQL--HGDRAKHGL-------LTWPIRMNIAIE 391
V +G L++V+E++ +G + L HG A LT ++IA +
Sbjct: 78 VKFYGVCVE-GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQ 136
Query: 392 TASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSR-LFPLDVTHVSTAPQGTPGY 450
A+ + YL + +HRD+ T N L+ N VK+ DFG+SR ++ D V +
Sbjct: 137 IAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRW 196
Query: 451 VDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
+ PE + T +SDV+S GVVL E+ +
Sbjct: 197 MPPESIMYRKFTTESDVWSLGVVLWEIFT 225
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 145/305 (47%), Gaps = 42/305 (13%)
Query: 273 SYSDLAEATNDFSRE---------KELGDGGFGTVYYGKLK--DGRE--VAVKRL---YD 316
+Y D + ++F++E K +G G FG V G+LK +E VA+K L Y
Sbjct: 25 TYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 84
Query: 317 NNYRRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAK 376
RR F+ E I+ + H N++ L G ++ S+ +++V E++ NG++ L A+
Sbjct: 85 EKQRR--DFLGEASIMGQFDHPNIIRLEGVVTK-SKPVMIVTEYMENGSLDSFLRKHDAQ 141
Query: 377 HGLLTWPIRMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLD 436
++ + + AS + YL +HRD+ NIL++SN KV+DFGLSR+ D
Sbjct: 142 FTVIQ---LVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 198
Query: 437 VTHVSTAPQGT--PGYVDPEYHQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHRHEIN 494
T G + PE + T SDV+S+G+VL E++S R
Sbjct: 199 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY-------GERPYWE 251
Query: 495 LANLAINKIQKCAFDELIDPCLGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLA 554
++N + K A DE G+ + ++ +L C Q+++ RP E++++
Sbjct: 252 MSNQDVIK----AVDE------GYRLPPPMD-CPAALYQLMLDCWQKDRNNRPKFEQIVS 300
Query: 555 ELQRI 559
L ++
Sbjct: 301 ILDKL 305
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 130/286 (45%), Gaps = 41/286 (14%)
Query: 290 LGDGGFGTVYYGKL--KDGREV--AVKRLYD-NNYRRVEQFMNEVEILTRLRHKNLVSLF 344
+G G FG VY+G L DG+++ AVK L + V QF+ E I+ H N++SL
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 156
Query: 345 GCTSRYSQGLLLVYEFVANGT----VADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
G R L+V ++ +G + ++ H K + ++ A + +L
Sbjct: 157 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD-------LIGFGLQVAKGMKFLA 209
Query: 401 ASDIIHRDVKTNNILLDSNFCVKVADFGLSRLF---PLDVTHVSTAPQGTPGYVDPEYHQ 457
+ +HRD+ N +LD F VKVADFGL+R D H T + ++ E Q
Sbjct: 210 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 269
Query: 458 CYQLTDKSDVYSFGVVLIELIS--SMPAVDMNRHRHEINLANLAINKIQKCAFDELIDPC 515
+ T KSDV+SFGV+L EL++ + P D +N ++ + +Q L+ P
Sbjct: 270 TQKFTTKSDVWSFGVLLWELMTRGAPPYPD-------VNTFDITVYLLQG---RRLLQP- 318
Query: 516 LGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLAELQRIKS 561
+ + E+ C E+RPS E+++ + I S
Sbjct: 319 ---------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 355
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 130/286 (45%), Gaps = 41/286 (14%)
Query: 290 LGDGGFGTVYYGKL--KDGREV--AVKRLYD-NNYRRVEQFMNEVEILTRLRHKNLVSLF 344
+G G FG VY+G L DG+++ AVK L + V QF+ E I+ H N++SL
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 345 GCTSRYSQGLLLVYEFVANGT----VADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
G R L+V ++ +G + ++ H K + ++ A + +L
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD-------LIGFGLQVAKGMKFLA 148
Query: 401 ASDIIHRDVKTNNILLDSNFCVKVADFGLSRLF---PLDVTHVSTAPQGTPGYVDPEYHQ 457
+ +HRD+ N +LD F VKVADFGL+R D H T + ++ E Q
Sbjct: 149 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 208
Query: 458 CYQLTDKSDVYSFGVVLIELIS--SMPAVDMNRHRHEINLANLAINKIQKCAFDELIDPC 515
+ T KSDV+SFGV+L EL++ + P D +N ++ + +Q L+ P
Sbjct: 209 TQKFTTKSDVWSFGVLLWELMTRGAPPYPD-------VNTFDITVYLLQG---RRLLQP- 257
Query: 516 LGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLAELQRIKS 561
+ + E+ C E+RPS E+++ + I S
Sbjct: 258 ---------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 294
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 145/305 (47%), Gaps = 42/305 (13%)
Query: 273 SYSDLAEATNDFSRE---------KELGDGGFGTVYYGKLK--DGRE--VAVKRL---YD 316
+Y D + ++F++E K +G G FG V G+LK +E VA+K L Y
Sbjct: 27 TYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 317 NNYRRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAK 376
RR F+ E I+ + H N++ L G ++ S+ +++V E++ NG++ L A+
Sbjct: 87 EKQRR--DFLGEASIMGQFDHPNIIRLEGVVTK-SKPVMIVTEYMENGSLDSFLRKHDAQ 143
Query: 377 HGLLTWPIRMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLD 436
++ + + AS + YL +HRD+ NIL++SN KV+DFGLSR+ D
Sbjct: 144 FTVIQ---LVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 200
Query: 437 VTHVSTAPQGT--PGYVDPEYHQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHRHEIN 494
T G + PE + T SDV+S+G+VL E++S R
Sbjct: 201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY-------GERPYWE 253
Query: 495 LANLAINKIQKCAFDELIDPCLGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLA 554
++N + K A DE G+ + ++ +L C Q+++ RP E++++
Sbjct: 254 MSNQDVIK----AVDE------GYRLPPPMD-CPAALYQLMLDCWQKDRNNRPKFEQIVS 302
Query: 555 ELQRI 559
L ++
Sbjct: 303 ILDKL 307
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 130/286 (45%), Gaps = 41/286 (14%)
Query: 290 LGDGGFGTVYYGKL--KDGREV--AVKRLYD-NNYRRVEQFMNEVEILTRLRHKNLVSLF 344
+G G FG VY+G L DG+++ AVK L + V QF+ E I+ H N++SL
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 102
Query: 345 GCTSRYSQGLLLVYEFVANGT----VADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
G R L+V ++ +G + ++ H K + ++ A + +L
Sbjct: 103 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD-------LIGFGLQVAKGMKFLA 155
Query: 401 ASDIIHRDVKTNNILLDSNFCVKVADFGLSRLF---PLDVTHVSTAPQGTPGYVDPEYHQ 457
+ +HRD+ N +LD F VKVADFGL+R D H T + ++ E Q
Sbjct: 156 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 215
Query: 458 CYQLTDKSDVYSFGVVLIELIS--SMPAVDMNRHRHEINLANLAINKIQKCAFDELIDPC 515
+ T KSDV+SFGV+L EL++ + P D +N ++ + +Q L+ P
Sbjct: 216 TQKFTTKSDVWSFGVLLWELMTRGAPPYPD-------VNTFDITVYLLQG---RRLLQP- 264
Query: 516 LGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLAELQRIKS 561
+ + E+ C E+RPS E+++ + I S
Sbjct: 265 ---------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 301
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 130/286 (45%), Gaps = 41/286 (14%)
Query: 290 LGDGGFGTVYYGKL--KDGREV--AVKRLYD-NNYRRVEQFMNEVEILTRLRHKNLVSLF 344
+G G FG VY+G L DG+++ AVK L + V QF+ E I+ H N++SL
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 345 GCTSRYSQGLLLVYEFVANGT----VADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
G R L+V ++ +G + ++ H K + ++ A + +L
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD-------LIGFGLQVAKGMKFLA 151
Query: 401 ASDIIHRDVKTNNILLDSNFCVKVADFGLSRLF---PLDVTHVSTAPQGTPGYVDPEYHQ 457
+ +HRD+ N +LD F VKVADFGL+R D H T + ++ E Q
Sbjct: 152 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 211
Query: 458 CYQLTDKSDVYSFGVVLIELIS--SMPAVDMNRHRHEINLANLAINKIQKCAFDELIDPC 515
+ T KSDV+SFGV+L EL++ + P D +N ++ + +Q L+ P
Sbjct: 212 TQKFTTKSDVWSFGVLLWELMTRGAPPYPD-------VNTFDITVYLLQG---RRLLQP- 260
Query: 516 LGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLAELQRIKS 561
+ + E+ C E+RPS E+++ + I S
Sbjct: 261 ---------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 297
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 144/298 (48%), Gaps = 34/298 (11%)
Query: 271 IFSYSDLAEATNDFSREKELGDGGFGTVYYGKLK--DGRE--VAVKRL---YDNNYRRVE 323
+ ++ +ATN S +K +G G FG V G+LK +E VA+K L Y RR
Sbjct: 35 VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR-- 91
Query: 324 QFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWP 383
F+ E I+ + H N++ L G ++ S+ +++V E++ NG++ L A+ ++
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTK-SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ-- 148
Query: 384 IRMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTA 443
+ + AS + YL +HRD+ NIL++SN KV+DFGLSR+ D T
Sbjct: 149 -LVGMLRGIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 444 PQGT--PGYVDPEYHQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHRHEINLANLAIN 501
G + PE + T SDV+S+G+VL E++S R ++N +
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY-------GERPYWEMSNQDVI 260
Query: 502 KIQKCAFDELIDPCLGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLAELQRI 559
K A DE G+ + ++ +L C Q+++ RP E++++ L ++
Sbjct: 261 K----AVDE------GYRLPPPMD-CPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 130/286 (45%), Gaps = 41/286 (14%)
Query: 290 LGDGGFGTVYYGKL--KDGREV--AVKRLYD-NNYRRVEQFMNEVEILTRLRHKNLVSLF 344
+G G FG VY+G L DG+++ AVK L + V QF+ E I+ H N++SL
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 345 GCTSRYSQGLLLVYEFVANGT----VADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
G R L+V ++ +G + ++ H K + ++ A + +L
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD-------LIGFGLQVAKGMKFLA 151
Query: 401 ASDIIHRDVKTNNILLDSNFCVKVADFGLSRLF---PLDVTHVSTAPQGTPGYVDPEYHQ 457
+ +HRD+ N +LD F VKVADFGL+R D H T + ++ E Q
Sbjct: 152 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQ 211
Query: 458 CYQLTDKSDVYSFGVVLIELIS--SMPAVDMNRHRHEINLANLAINKIQKCAFDELIDPC 515
+ T KSDV+SFGV+L EL++ + P D +N ++ + +Q L+ P
Sbjct: 212 TQKFTTKSDVWSFGVLLWELMTRGAPPYPD-------VNTFDITVYLLQG---RRLLQP- 260
Query: 516 LGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLAELQRIKS 561
+ + E+ C E+RPS E+++ + I S
Sbjct: 261 ---------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 297
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 135/298 (45%), Gaps = 46/298 (15%)
Query: 283 DFSREK-----ELGDGGFGTVYYGKLKD------GREVAVKRLYDN-NYRRVEQFMNEVE 330
+ SREK ELG G FG VY G +D VAVK + ++ + R +F+NE
Sbjct: 10 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 69
Query: 331 ILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAK------HGLLTWPI 384
++ ++V L G S+ Q L+V E +A+G + L R + T
Sbjct: 70 VMKGFTCHHVVRLLGVVSK-GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQE 128
Query: 385 RMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAP 444
+ +A E A +AYL+A +HRD+ N ++ +F VK+ DFG++R D+
Sbjct: 129 MIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR----DIXETDXXR 184
Query: 445 QGTPG-----YVDPEYHQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHRHEINLANLA 499
+G G ++ PE + T SD++SFGVVL E+ S LA
Sbjct: 185 KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS------------------LA 226
Query: 500 INKIQKCAFDELIDPCLGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLAELQ 557
Q + ++++ + ++ V +L +C Q N ++RP+ E++ L+
Sbjct: 227 EQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 284
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 130/286 (45%), Gaps = 41/286 (14%)
Query: 290 LGDGGFGTVYYGKL--KDGREV--AVKRLYD-NNYRRVEQFMNEVEILTRLRHKNLVSLF 344
+G G FG VY+G L DG+++ AVK L + V QF+ E I+ H N++SL
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 345 GCTSRYSQGLLLVYEFVANGT----VADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
G R L+V ++ +G + ++ H K + ++ A + +L
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD-------LIGFGLQVAKGMKFLA 150
Query: 401 ASDIIHRDVKTNNILLDSNFCVKVADFGLSRLF---PLDVTHVSTAPQGTPGYVDPEYHQ 457
+ +HRD+ N +LD F VKVADFGL+R D H T + ++ E Q
Sbjct: 151 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 210
Query: 458 CYQLTDKSDVYSFGVVLIELIS--SMPAVDMNRHRHEINLANLAINKIQKCAFDELIDPC 515
+ T KSDV+SFGV+L EL++ + P D +N ++ + +Q L+ P
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMTRGAPPYPD-------VNTFDITVYLLQG---RRLLQP- 259
Query: 516 LGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLAELQRIKS 561
+ + E+ C E+RPS E+++ + I S
Sbjct: 260 ---------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 296
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 103/193 (53%), Gaps = 7/193 (3%)
Query: 288 KELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCT 347
+ LG G FG V+ G +VAVK L + + F+ E ++ +L+H+ LV L+
Sbjct: 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 348 SRYSQGLLLVYEFVANGTVADQLHGDRAKHGL-LTWPIRMNIAIETASALAYLHASDIIH 406
++ + + ++ E++ NG++ D L + G+ LT +++A + A +A++ + IH
Sbjct: 78 TQ--EPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIH 132
Query: 407 RDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQLTDKSD 466
RD++ NIL+ K+ADFGL+RL + + + PE T KSD
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 192
Query: 467 VYSFGVVLIELIS 479
V+SFG++L E+++
Sbjct: 193 VWSFGILLTEIVT 205
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 145/305 (47%), Gaps = 42/305 (13%)
Query: 273 SYSDLAEATNDFSRE---------KELGDGGFGTVYYGKLK--DGRE--VAVKRL---YD 316
+Y D + ++F++E K +G G FG V G+LK +E VA+K L Y
Sbjct: 27 TYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 317 NNYRRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAK 376
RR F+ E I+ + H N++ L G ++ S+ +++V E++ NG++ L A+
Sbjct: 87 EKQRR--DFLGEASIMGQFDHPNIIRLEGVVTK-SKPVMIVTEYMENGSLDSFLRKHDAQ 143
Query: 377 HGLLTWPIRMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLD 436
++ + + AS + YL +HRD+ NIL++SN KV+DFGLSR+ D
Sbjct: 144 FTVIQ---LVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 200
Query: 437 VTHVSTAPQGT--PGYVDPEYHQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHRHEIN 494
T G + PE + T SDV+S+G+VL E++S R
Sbjct: 201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY-------GERPYWE 253
Query: 495 LANLAINKIQKCAFDELIDPCLGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLA 554
++N + K A DE G+ + ++ +L C Q+++ RP E++++
Sbjct: 254 MSNQDVIK----AVDE------GYRLPPPMD-CPAALYQLMLDCWQKDRNNRPKFEQIVS 302
Query: 555 ELQRI 559
L ++
Sbjct: 303 ILDKL 307
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 104/215 (48%), Gaps = 12/215 (5%)
Query: 280 ATNDFSREKELGDGGFGTVYYGKLKDGREV-AVKRLYDNNYRRV---EQFMNEVEILTRL 335
A DF + LG G FG VY + K + + A+K L+ + Q EVEI + L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 336 RHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASA 395
RH N++ L+G ++ + L+ E+ GTV +L K E A+A
Sbjct: 92 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQ----KLSKFDEQRTATYITELANA 146
Query: 396 LAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEY 455
L+Y H+ +IHRD+K N+LL S +K+ADFG S P + T GT Y+ PE
Sbjct: 147 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGTLDYLPPEM 203
Query: 456 HQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHR 490
+ +K D++S GV+ E + P + N ++
Sbjct: 204 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 238
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 103/193 (53%), Gaps = 7/193 (3%)
Query: 288 KELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCT 347
+ LG G FG V+ G +VAVK L + + F+ E ++ +L+H+ LV L+
Sbjct: 14 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVV 72
Query: 348 SRYSQGLLLVYEFVANGTVADQLHGDRAKHGL-LTWPIRMNIAIETASALAYLHASDIIH 406
++ + + ++ E++ NG++ D L + G+ LT +++A + A +A++ + IH
Sbjct: 73 TQ--EPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIH 127
Query: 407 RDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQLTDKSD 466
RD++ NIL+ K+ADFGL+RL + + + PE T KSD
Sbjct: 128 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 187
Query: 467 VYSFGVVLIELIS 479
V+SFG++L E+++
Sbjct: 188 VWSFGILLTEIVT 200
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 112/218 (51%), Gaps = 27/218 (12%)
Query: 280 ATNDFSREKELGDGGFGTVYYGKL-KDGREVAVKRLYDNN-------YRRVEQFMNEVEI 331
A N+ EK++G GGFG V+ G+L KD VA+K L + + ++F EV I
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 332 LTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIE 391
++ L H N+V L+G + +V EFV G + +L D+A + W +++ + ++
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPR---MVMEFVPCGDLYHRLL-DKAHP--IKWSVKLRLMLD 130
Query: 392 TASALAYLHASD--IIHRDVKTNNILLDS-----NFCVKVADFGLSRLFPLDVTHVSTAP 444
A + Y+ + I+HRD+++ NI L S C KVADFGLS+ H +
Sbjct: 131 IALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ----QSVHSVSGL 186
Query: 445 QGTPGYVDPEYHQCYQ--LTDKSDVYSFGVVLIELISS 480
G ++ PE + T+K+D YSF ++L +++
Sbjct: 187 LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTG 224
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 141/290 (48%), Gaps = 34/290 (11%)
Query: 279 EATNDFSREKELGDGGFGTVYYGKLK--DGRE--VAVKRL---YDNNYRRVEQFMNEVEI 331
+ATN S +K +G G FG V G+LK +E VA+K L Y RR F+ E I
Sbjct: 14 DATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR--DFLGEASI 70
Query: 332 LTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIE 391
+ + H N++ L G ++ S+ +++V E++ NG++ L A+ ++ + +
Sbjct: 71 MGQFDHPNIIRLEGVVTK-SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ---LVGMLRG 126
Query: 392 TASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGT--PG 449
AS + YL +HRD+ NIL++SN KV+DFGLSR+ D T G
Sbjct: 127 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 186
Query: 450 YVDPEYHQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHRHEINLANLAINKIQKCAFD 509
+ PE + T SDV+S+G+VL E++S R ++N + K A D
Sbjct: 187 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSY-------GERPYWEMSNQDVIK----AVD 235
Query: 510 ELIDPCLGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLAELQRI 559
E G+ + ++ +L C Q+++ RP E++++ L ++
Sbjct: 236 E------GYRLPPPMD-CPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 278
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 134/298 (44%), Gaps = 46/298 (15%)
Query: 283 DFSREK-----ELGDGGFGTVYYGKLKD------GREVAVKRLYDN-NYRRVEQFMNEVE 330
+ SREK ELG G FG VY G +D VAVK + ++ + R +F+NE
Sbjct: 13 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 72
Query: 331 ILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAK------HGLLTWPI 384
++ ++V L G S+ Q L+V E +A+G + L R + T
Sbjct: 73 VMKGFTCHHVVRLLGVVSK-GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQE 131
Query: 385 RMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAP 444
+ +A E A +AYL+A +HRD+ N ++ +F VK+ DFG++R D+
Sbjct: 132 MIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR----DIXETDXXR 187
Query: 445 QGTPG-----YVDPEYHQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHRHEINLANLA 499
+G G ++ PE + T SD++SFGVVL E+ S LA
Sbjct: 188 KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS------------------LA 229
Query: 500 INKIQKCAFDELIDPCLGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLAELQ 557
Q + ++++ + ++ V +L +C Q N +RP+ E++ L+
Sbjct: 230 EQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 287
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 139/310 (44%), Gaps = 46/310 (14%)
Query: 271 IFSYSDLAEATNDFSREK-----ELGDGGFGTVYYGKLKD------GREVAVKRLYDN-N 318
+F S + SREK ELG G FG VY G +D VAVK + ++ +
Sbjct: 1 VFPSSVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESAS 60
Query: 319 YRRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAK-- 376
R +F+NE ++ ++V L G S+ Q L+V E +A+G + L R +
Sbjct: 61 LRERIEFLNEASVMKGFTCHHVVRLLGVVSK-GQPTLVVMELMAHGDLKSYLRSLRPEAE 119
Query: 377 ----HGLLTWPIRMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRL 432
T + +A E A +AYL+A +HRD+ N ++ +F VK+ DFG++R
Sbjct: 120 NNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR- 178
Query: 433 FPLDVTHVSTAPQGTPG-----YVDPEYHQCYQLTDKSDVYSFGVVLIELISSMPAVDMN 487
D+ + +G G ++ PE + T SD++SFGVVL E+ S
Sbjct: 179 ---DIYETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS-------- 227
Query: 488 RHRHEINLANLAINKIQKCAFDELIDPCLGFESDEEVKRMTTSVAELAFLCLQQNKELRP 547
LA Q + ++++ + ++ V +L +C Q N ++RP
Sbjct: 228 ----------LAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRP 277
Query: 548 SMEEVLAELQ 557
+ E++ L+
Sbjct: 278 TFLEIVNLLK 287
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 144/298 (48%), Gaps = 34/298 (11%)
Query: 271 IFSYSDLAEATNDFSREKELGDGGFGTVYYGKLK--DGRE--VAVKRL---YDNNYRRVE 323
+ ++ +ATN S +K +G G FG V G+LK +E VA+K L Y RR
Sbjct: 35 VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR-- 91
Query: 324 QFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWP 383
F+ E I+ + H N++ L G ++ S+ +++V E++ NG++ L A+ ++
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTK-SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ-- 148
Query: 384 IRMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTA 443
+ + AS + YL +HRD+ NIL++SN KV+DFGLSR+ D T
Sbjct: 149 -LVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 444 PQGT--PGYVDPEYHQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHRHEINLANLAIN 501
G + PE + T SDV+S+G+VL E++S R ++N +
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY-------GERPYWEMSNQDVI 260
Query: 502 KIQKCAFDELIDPCLGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLAELQRI 559
K A DE G+ + ++ +L C Q+++ RP E++++ L ++
Sbjct: 261 K----AVDE------GYRLPPPMD-CPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 114/225 (50%), Gaps = 24/225 (10%)
Query: 273 SYSDLAEATNDFSREKE---------LGDGGFGTVYYGKLK--DGRE--VAVKRL---YD 316
+Y D +A ++F++E E +G G FG V G+LK RE VA+K L Y
Sbjct: 4 TYEDPNQAVHEFAKEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYT 63
Query: 317 NNYRRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAK 376
RR F+ E I+ + H N++ L G ++ S+ +++V E++ NG++ L +
Sbjct: 64 EKQRR--DFLGEASIMGQFDHPNIIHLEGVVTK-SKPVMIVTEYMENGSLDTFL---KKN 117
Query: 377 HGLLTWPIRMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLD 436
G T + + ++ + YL +HRD+ NIL++SN KV+DFGLSR+ D
Sbjct: 118 DGQFTVIQLVGMLRGISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 177
Query: 437 VTHVSTAPQGT--PGYVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
T G + PE + T SDV+S+G+V+ E++S
Sbjct: 178 PEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVS 222
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 144/298 (48%), Gaps = 34/298 (11%)
Query: 271 IFSYSDLAEATNDFSREKELGDGGFGTVYYGKLK--DGRE--VAVKRL---YDNNYRRVE 323
+ ++ +ATN S +K +G G FG V G+LK +E VA+K L Y RR
Sbjct: 35 VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR-- 91
Query: 324 QFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWP 383
F+ E I+ + H N++ L G ++ S+ +++V E++ NG++ L A+ ++
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTK-SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ-- 148
Query: 384 IRMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTA 443
+ + AS + YL +HRD+ NIL++SN KV+DFGLSR+ D T
Sbjct: 149 -LVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 444 PQGT--PGYVDPEYHQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHRHEINLANLAIN 501
G + PE + T SDV+S+G+VL E++S R ++N +
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY-------GERPYWEMSNQDVI 260
Query: 502 KIQKCAFDELIDPCLGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLAELQRI 559
K A DE G+ + ++ +L C Q+++ RP E++++ L ++
Sbjct: 261 K----AVDE------GYRLPPPMD-CPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 141/290 (48%), Gaps = 34/290 (11%)
Query: 279 EATNDFSREKELGDGGFGTVYYGKLK--DGRE--VAVKRL---YDNNYRRVEQFMNEVEI 331
+ATN S +K +G G FG V G+LK +E VA+K L Y RR F+ E I
Sbjct: 31 DATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR--DFLGEASI 87
Query: 332 LTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIE 391
+ + H N++ L G ++ S+ +++V E++ NG++ L A+ ++ + +
Sbjct: 88 MGQFDHPNIIRLEGVVTK-SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ---LVGMLRG 143
Query: 392 TASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGT--PG 449
AS + YL +HRD+ NIL++SN KV+DFGLSR+ D T G
Sbjct: 144 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 203
Query: 450 YVDPEYHQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHRHEINLANLAINKIQKCAFD 509
+ PE + T SDV+S+G+VL E++S R ++N + K A D
Sbjct: 204 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSY-------GERPYWEMSNQDVIK----AVD 252
Query: 510 ELIDPCLGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLAELQRI 559
E G+ + ++ +L C Q+++ RP E++++ L ++
Sbjct: 253 E------GYRLPPPMD-CPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 295
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 118/236 (50%), Gaps = 26/236 (11%)
Query: 272 FSYSDLAEATNDFSRE---------KELGDGGFGTVYYGKLK--DGRE--VAVKRL---Y 315
F++ D +A +F++E K +G G FG V G+LK RE VA+K L Y
Sbjct: 10 FTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGY 69
Query: 316 DNNYRRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRA 375
+ RR F++E I+ + H N++ L G ++ + ++++ E++ NG++ L R
Sbjct: 70 TDKQRR--DFLSEASIMGQFDHPNIIHLEGVVTK-CKPVMIITEYMENGSLDAFL---RK 123
Query: 376 KHGLLTWPIRMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPL 435
G T + + S + YL +HRD+ NIL++SN KV+DFG+SR+
Sbjct: 124 NDGRFTVIQLVGMLRGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLED 183
Query: 436 DVTHVSTAPQGT--PGYVDPEYHQCYQLTDKSDVYSFGVVLIELIS--SMPAVDMN 487
D T G + PE + T SDV+S+G+V+ E++S P DM+
Sbjct: 184 DPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMS 239
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 104/215 (48%), Gaps = 12/215 (5%)
Query: 280 ATNDFSREKELGDGGFGTVYYGKLKDGREV-AVKRLYDNNYRRV---EQFMNEVEILTRL 335
A DF + LG G FG VY + K + + A+K L+ + Q EVEI + L
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 336 RHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASA 395
RH N++ L+G ++ + L+ E+ GTV +L K E A+A
Sbjct: 83 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQ----KLSKFDEQRTATYITELANA 137
Query: 396 LAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEY 455
L+Y H+ +IHRD+K N+LL S +K+ADFG S P + T GT Y+ PE
Sbjct: 138 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGTLDYLPPEM 194
Query: 456 HQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHR 490
+ +K D++S GV+ E + P + N ++
Sbjct: 195 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 229
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 137/296 (46%), Gaps = 41/296 (13%)
Query: 280 ATNDFSREKELGDGGFGTVY----YGKLKDGRE--VAVKRLYDN-NYRRVEQFMNEVEIL 332
A + +ELG G FG VY G +KD E VA+K + + + R +F+NE ++
Sbjct: 8 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 67
Query: 333 TRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAK---HGLLTWPI---RM 386
++V L G S+ Q L++ E + G + L R + + +L P +
Sbjct: 68 KEFNCHHVVRLLGVVSQ-GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 126
Query: 387 NIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQG 446
+A E A +AYL+A+ +HRD+ N ++ +F VK+ DFG++R D+ +G
Sbjct: 127 QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIXETDXXRKG 182
Query: 447 TPG-----YVDPEYHQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHRHEINLANLAIN 501
G ++ PE + T SDV+SFGVVL E +A LA
Sbjct: 183 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWE------------------IATLAEQ 224
Query: 502 KIQKCAFDELIDPCLGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLAELQ 557
Q + ++++ + ++ + EL +C Q N ++RPS E+++ ++
Sbjct: 225 PYQGLSNEQVLRFVMEGGLLDKPDNCPDMLLELMRMCWQYNPKMRPSFLEIISSIK 280
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 104/215 (48%), Gaps = 12/215 (5%)
Query: 280 ATNDFSREKELGDGGFGTVYYGKLKDGREV-AVKRLYDNNYRRV---EQFMNEVEILTRL 335
A DF + LG G FG VY + K + + A+K L+ + Q EVEI + L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 336 RHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASA 395
RH N++ L+G ++ + L+ E+ GTV +L K E A+A
Sbjct: 67 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQ----KLSKFDEQRTATYITELANA 121
Query: 396 LAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEY 455
L+Y H+ +IHRD+K N+LL S +K+ADFG S P + T GT Y+ PE
Sbjct: 122 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSCHAP---SSRRTTLSGTLDYLPPEM 178
Query: 456 HQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHR 490
+ +K D++S GV+ E + P + N ++
Sbjct: 179 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 213
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 135/286 (47%), Gaps = 28/286 (9%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKDGRE-VAVKRL-YDNNYRRVEQFMNEVEILTRLRHKN 339
+D+ ++ +G G V +E VA+KR+ + +++ + E++ +++ H N
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 340 LVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAK----HGLLTWPIRMNIAIETASA 395
+VS + + L LV + ++ G+V D + AK G+L I E
Sbjct: 75 IVSYY-TSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEG 133
Query: 396 LAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPL--DVTH--VSTAPQGTPGYV 451
L YLH + IHRDVK NILL + V++ADFG+S D+T V GTP ++
Sbjct: 134 LEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWM 193
Query: 452 DPEYHQCYQLTD-KSDVYSFGVVLIELISSMPAVDMNRHRHEINLANLAINKIQKCAFDE 510
PE + + D K+D++SFG+ IEL + H+ + + +Q
Sbjct: 194 APEVMEQVRGYDFKADIWSFGITAIELATGAAPY------HKYPPMKVLMLTLQN----- 242
Query: 511 LIDPC---LGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVL 553
DP G + E +K+ S ++ LCLQ++ E RP+ E+L
Sbjct: 243 --DPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELL 286
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 104/215 (48%), Gaps = 12/215 (5%)
Query: 280 ATNDFSREKELGDGGFGTVYYGKLKDGREV-AVKRLYDNNYRRV---EQFMNEVEILTRL 335
A DF + LG G FG VY + K+ + + A+K L+ + Q EVEI + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 336 RHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASA 395
RH N++ L+G S + L+ E+ GTV +L K E A+A
Sbjct: 66 RHPNILRLYGYFHD-STRVYLILEYAPLGTVYRELQ----KLSKFDEQRTATYITELANA 120
Query: 396 LAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEY 455
L+Y H+ +IHRD+K N+LL S +K+ADFG S P + A GT Y+ PE
Sbjct: 121 LSYCHSKKVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRAALCGTLDYLPPEM 177
Query: 456 HQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHR 490
+ +K D++S GV+ E + P + N ++
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 212
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 138/310 (44%), Gaps = 46/310 (14%)
Query: 271 IFSYSDLAEATNDFSREK-----ELGDGGFGTVYYGKLKD------GREVAVKRLYDN-N 318
+F S + SREK ELG G FG VY G +D VAVK + ++ +
Sbjct: 1 VFPSSVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESAS 60
Query: 319 YRRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAK-- 376
R +F+NE ++ ++V L G S+ Q L+V E +A+G + L R +
Sbjct: 61 LRERIEFLNEASVMKGFTCHHVVRLLGVVSK-GQPTLVVMELMAHGDLKSYLRSLRPEAE 119
Query: 377 ----HGLLTWPIRMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRL 432
T + +A E A +AYL+A +HRD+ N ++ +F VK+ DFG++R
Sbjct: 120 NNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR- 178
Query: 433 FPLDVTHVSTAPQGTPG-----YVDPEYHQCYQLTDKSDVYSFGVVLIELISSMPAVDMN 487
D+ +G G ++ PE + T SD++SFGVVL E+ S
Sbjct: 179 ---DIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS-------- 227
Query: 488 RHRHEINLANLAINKIQKCAFDELIDPCLGFESDEEVKRMTTSVAELAFLCLQQNKELRP 547
LA Q + ++++ + ++ V +L +C Q N ++RP
Sbjct: 228 ----------LAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRP 277
Query: 548 SMEEVLAELQ 557
+ E++ L+
Sbjct: 278 TFLEIVNLLK 287
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 135/286 (47%), Gaps = 28/286 (9%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKDGRE-VAVKRL-YDNNYRRVEQFMNEVEILTRLRHKN 339
+D+ ++ +G G V +E VA+KR+ + +++ + E++ +++ H N
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 69
Query: 340 LVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAK----HGLLTWPIRMNIAIETASA 395
+VS + + L LV + ++ G+V D + AK G+L I E
Sbjct: 70 IVSYY-TSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEG 128
Query: 396 LAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPL--DVTH--VSTAPQGTPGYV 451
L YLH + IHRDVK NILL + V++ADFG+S D+T V GTP ++
Sbjct: 129 LEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWM 188
Query: 452 DPEYHQCYQLTD-KSDVYSFGVVLIELISSMPAVDMNRHRHEINLANLAINKIQKCAFDE 510
PE + + D K+D++SFG+ IEL + H+ + + +Q
Sbjct: 189 APEVMEQVRGYDFKADIWSFGITAIELATGAAPY------HKYPPMKVLMLTLQN----- 237
Query: 511 LIDPC---LGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVL 553
DP G + E +K+ S ++ LCLQ++ E RP+ E+L
Sbjct: 238 --DPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELL 281
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 103/210 (49%), Gaps = 12/210 (5%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKDGREV-AVKRLYDNNYRRV---EQFMNEVEILTRLRH 337
DF + LG G FG VY + + + + A+K L+ + Q EVEI + LRH
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
N++ L+G ++ + L+ E+ GTV +L K E A+AL+
Sbjct: 72 PNILRLYGYFHDATR-VYLILEYAPLGTVYRELQ----KLSRFDEQRTATYITELANALS 126
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQ 457
Y H+ +IHRD+K N+LL SN +K+ADFG S P + T GT Y+ PE +
Sbjct: 127 YCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAP---SSRRTTLCGTLDYLPPEMIE 183
Query: 458 CYQLTDKSDVYSFGVVLIELISSMPAVDMN 487
+K D++S GV+ E + MP + +
Sbjct: 184 GRMHDEKVDLWSLGVLCYEFLVGMPPFEAH 213
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 104/215 (48%), Gaps = 12/215 (5%)
Query: 280 ATNDFSREKELGDGGFGTVYYGKLKDGREV-AVKRLYDNNYRRV---EQFMNEVEILTRL 335
A DF + LG G FG VY + K + + A+K L+ + Q EVEI + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 336 RHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASA 395
RH N++ L+G ++ + L+ E+ GTV +L K E A+A
Sbjct: 69 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQ----KLSKFDEQRTATYITELANA 123
Query: 396 LAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEY 455
L+Y H+ +IHRD+K N+LL S +K+ADFG S P + T GT Y+ PE
Sbjct: 124 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGTLDYLPPEM 180
Query: 456 HQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHR 490
+ +K D++S GV+ E + P + N ++
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 215
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 104/215 (48%), Gaps = 12/215 (5%)
Query: 280 ATNDFSREKELGDGGFGTVYYGKLKDGREV-AVKRLYDNNYRRV---EQFMNEVEILTRL 335
A DF + LG G FG VY + K + + A+K L+ + Q EVEI + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 336 RHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASA 395
RH N++ L+G ++ + L+ E+ GTV +L K E A+A
Sbjct: 71 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQ----KLSKFDEQRTATYITELANA 125
Query: 396 LAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEY 455
L+Y H+ +IHRD+K N+LL S +K+ADFG S P + T GT Y+ PE
Sbjct: 126 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGTLDYLPPEM 182
Query: 456 HQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHR 490
+ +K D++S GV+ E + P + N ++
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 217
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 137/296 (46%), Gaps = 41/296 (13%)
Query: 280 ATNDFSREKELGDGGFGTVY----YGKLKDGRE--VAVKRLYDN-NYRRVEQFMNEVEIL 332
A + +ELG G FG VY G +KD E VA+K + + + R +F+NE ++
Sbjct: 23 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 82
Query: 333 TRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDR---AKHGLLTWPI---RM 386
++V L G S+ Q L++ E + G + L R A + +L P +
Sbjct: 83 KEFNCHHVVRLLGVVSQ-GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMI 141
Query: 387 NIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQG 446
+A E A +AYL+A+ +HRD+ N ++ +F VK+ DFG++R D+ +G
Sbjct: 142 QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYETDYYRKG 197
Query: 447 TPG-----YVDPEYHQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHRHEINLANLAIN 501
G ++ PE + T SDV+SFGVVL E +A LA
Sbjct: 198 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWE------------------IATLAEQ 239
Query: 502 KIQKCAFDELIDPCLGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLAELQ 557
Q + ++++ + ++ + EL +C Q N ++RPS E+++ ++
Sbjct: 240 PYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 295
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 124/278 (44%), Gaps = 32/278 (11%)
Query: 280 ATNDFSREKELGDGGFGTVYYGKLKDGREV-AVKRLYDNNYRRV---EQFMNEVEILTRL 335
A DF + LG G FG VY + K + + A+K L+ + Q EVEI + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 336 RHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASA 395
RH N++ L+G ++ + L+ E+ GTV +L K E A+A
Sbjct: 71 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQ----KLSKFDEQRTATYITELANA 125
Query: 396 LAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEY 455
L+Y H+ +IHRD+K N+LL S +K+ADFG S P + T GT Y+ PE
Sbjct: 126 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGTLDYLPPEX 182
Query: 456 HQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHRHEINLANLAINKIQKCAFDELIDPC 515
+ +K D++S GV+ E + P + N ++ I++++ F + +
Sbjct: 183 IEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK----RISRVE-FTFPDFV--- 234
Query: 516 LGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVL 553
T +L L+ N RP + EVL
Sbjct: 235 ------------TEGARDLISRLLKHNPSQRPXLREVL 260
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 132/286 (46%), Gaps = 41/286 (14%)
Query: 290 LGDGGFGTVYYGKL--KDGREV--AVKRLYD-NNYRRVEQFMNEVEILTRLRHKNLVSLF 344
+G G FG VY+G L DG+++ AVK L + V QF+ E I+ H N++SL
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 345 GCTSRYSQGLLLVYEFVANGT----VADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
G R L+V ++ +G + ++ H K + ++ A + YL
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD-------LIGFGLQVAKGMKYLA 149
Query: 401 ASDIIHRDVKTNNILLDSNFCVKVADFGLSR-LFPLDV--THVSTAPQGTPGYVDPEYHQ 457
+ +HRD+ N +LD F VKVADFGL+R ++ + H T + ++ E Q
Sbjct: 150 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQ 209
Query: 458 CYQLTDKSDVYSFGVVLIELIS--SMPAVDMNRHRHEINLANLAINKIQKCAFDELIDPC 515
+ T KSDV+SFGV+L EL++ + P D +N ++ + +Q L+ P
Sbjct: 210 TQKFTTKSDVWSFGVLLWELMTRGAPPYPD-------VNTFDITVYLLQG---RRLLQP- 258
Query: 516 LGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLAELQRIKS 561
+ + E+ C E+RPS E+++ + I S
Sbjct: 259 ---------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 295
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 104/215 (48%), Gaps = 12/215 (5%)
Query: 280 ATNDFSREKELGDGGFGTVYYGKLKDGREV-AVKRLYDNNYRRV---EQFMNEVEILTRL 335
A DF + LG G FG VY + K + + A+K L+ + Q EVEI + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 336 RHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASA 395
RH N++ L+G ++ + L+ E+ GTV +L K E A+A
Sbjct: 66 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQ----KLSKFDEQRTATYITELANA 120
Query: 396 LAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEY 455
L+Y H+ +IHRD+K N+LL S +K+ADFG S P + T GT Y+ PE
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGTLDYLPPEM 177
Query: 456 HQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHR 490
+ +K D++S GV+ E + P + N ++
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 212
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 135/286 (47%), Gaps = 39/286 (13%)
Query: 287 EKELGDGGFGTVYYGKLK--DGRE--VAVKRL---YDNNYRRVEQFMNEVEILTRLRHKN 339
E+ +G G FG V G LK RE VA+K L Y RR F++E I+ + H N
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRR--DFLSEASIMGQFDHPN 69
Query: 340 LVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYL 399
++ L G ++ S ++++ EF+ NG++ L R G T + + A+ + YL
Sbjct: 70 VIHLEGVVTK-STPVMIITEFMENGSLDSFL---RQNDGQFTVIQLVGMLRGIAAGMKYL 125
Query: 400 HASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDV---THVSTAPQGTP-GYVDPEY 455
+ +HR + NIL++SN KV+DFGLSR D T+ S P + PE
Sbjct: 126 ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEA 185
Query: 456 HQCYQLTDKSDVYSFGVVLIELIS--SMPAVDMNRHRHEINLANLAINKIQKCAFDELID 513
Q + T SDV+S+G+V+ E++S P DM IN I++ D +
Sbjct: 186 IQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQD--------VINAIEQ---DYRLP 234
Query: 514 PCLGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLAELQRI 559
P + S ++ +L C Q+++ RP +++ L ++
Sbjct: 235 PPMDCPS---------ALHQLMLDCWQKDRNHRPKFGQIVNTLDKM 271
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 132/286 (46%), Gaps = 41/286 (14%)
Query: 290 LGDGGFGTVYYGKL--KDGREV--AVKRLYD-NNYRRVEQFMNEVEILTRLRHKNLVSLF 344
+G G FG VY+G L DG+++ AVK L + V QF+ E I+ H N++SL
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 89
Query: 345 GCTSRYSQGLLLVYEFVANGT----VADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
G R L+V ++ +G + ++ H K + ++ A + YL
Sbjct: 90 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD-------LIGFGLQVAKGMKYLA 142
Query: 401 ASDIIHRDVKTNNILLDSNFCVKVADFGLSR-LFPLDV--THVSTAPQGTPGYVDPEYHQ 457
+ +HRD+ N +LD F VKVADFGL+R ++ + H T + ++ E Q
Sbjct: 143 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 202
Query: 458 CYQLTDKSDVYSFGVVLIELIS--SMPAVDMNRHRHEINLANLAINKIQKCAFDELIDPC 515
+ T KSDV+SFGV+L EL++ + P D +N ++ + +Q L+ P
Sbjct: 203 TQKFTTKSDVWSFGVLLWELMTRGAPPYPD-------VNTFDITVYLLQG---RRLLQP- 251
Query: 516 LGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLAELQRIKS 561
+ + E+ C E+RPS E+++ + I S
Sbjct: 252 ---------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 288
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 104/215 (48%), Gaps = 12/215 (5%)
Query: 280 ATNDFSREKELGDGGFGTVYYGKLKDGREV-AVKRLYDNNYRRV---EQFMNEVEILTRL 335
A DF + LG G FG VY + K + + A+K L+ + Q EVEI + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 336 RHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASA 395
RH N++ L+G ++ + L+ E+ GTV +L K E A+A
Sbjct: 66 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQ----KLSKFDEQRTATYITELANA 120
Query: 396 LAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEY 455
L+Y H+ +IHRD+K N+LL S +K+ADFG S P + T GT Y+ PE
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTELCGTLDYLPPEM 177
Query: 456 HQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHR 490
+ +K D++S GV+ E + P + N ++
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 212
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 137/296 (46%), Gaps = 41/296 (13%)
Query: 280 ATNDFSREKELGDGGFGTVY----YGKLKDGRE--VAVKRLYDN-NYRRVEQFMNEVEIL 332
A + +ELG G FG VY G +KD E VA+K + + + R +F+NE ++
Sbjct: 17 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 76
Query: 333 TRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAK---HGLLTWPI---RM 386
++V L G S+ Q L++ E + G + L R + + +L P +
Sbjct: 77 KEFNCHHVVRLLGVVSQ-GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 135
Query: 387 NIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQG 446
+A E A +AYL+A+ +HRD+ N ++ +F VK+ DFG++R D+ +G
Sbjct: 136 QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIXETDXXRKG 191
Query: 447 TPG-----YVDPEYHQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHRHEINLANLAIN 501
G ++ PE + T SDV+SFGVVL E +A LA
Sbjct: 192 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWE------------------IATLAEQ 233
Query: 502 KIQKCAFDELIDPCLGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLAELQ 557
Q + ++++ + ++ + EL +C Q N ++RPS E+++ ++
Sbjct: 234 PYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 289
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 132/286 (46%), Gaps = 41/286 (14%)
Query: 290 LGDGGFGTVYYGKL--KDGREV--AVKRLYD-NNYRRVEQFMNEVEILTRLRHKNLVSLF 344
+G G FG VY+G L DG+++ AVK L + V QF+ E I+ H N++SL
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 116
Query: 345 GCTSRYSQGLLLVYEFVANGT----VADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
G R L+V ++ +G + ++ H K + ++ A + YL
Sbjct: 117 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD-------LIGFGLQVAKGMKYLA 169
Query: 401 ASDIIHRDVKTNNILLDSNFCVKVADFGLSR-LFPLDV--THVSTAPQGTPGYVDPEYHQ 457
+ +HRD+ N +LD F VKVADFGL+R ++ + H T + ++ E Q
Sbjct: 170 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 229
Query: 458 CYQLTDKSDVYSFGVVLIELIS--SMPAVDMNRHRHEINLANLAINKIQKCAFDELIDPC 515
+ T KSDV+SFGV+L EL++ + P D +N ++ + +Q L+ P
Sbjct: 230 TQKFTTKSDVWSFGVLLWELMTRGAPPYPD-------VNTFDITVYLLQG---RRLLQP- 278
Query: 516 LGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLAELQRIKS 561
+ + E+ C E+RPS E+++ + I S
Sbjct: 279 ---------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 315
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 105/219 (47%), Gaps = 20/219 (9%)
Query: 280 ATNDFSREKELGDGGFGTVYYGKLKDGREV-AVKRLYDNNYRRV---EQFMNEVEILTRL 335
A DF + LG G FG VY + K + + A+K L+ + Q EVEI + L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 336 RHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASA 395
RH N++ L+G ++ + L+ E+ GTV +L K E A+A
Sbjct: 92 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQ----KLSKFDEQRTATYITELANA 146
Query: 396 LAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQ----GTPGYV 451
L+Y H+ +IHRD+K N+LL S +K+ADFG S H ++ + GT Y+
Sbjct: 147 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRDDLCGTLDYL 199
Query: 452 DPEYHQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHR 490
PE + +K D++S GV+ E + P + N ++
Sbjct: 200 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 238
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 104/215 (48%), Gaps = 12/215 (5%)
Query: 280 ATNDFSREKELGDGGFGTVYYGKLKDGREV-AVKRLYDNNYRRV---EQFMNEVEILTRL 335
A DF + LG G FG VY + K + + A+K L+ + Q EVEI + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 336 RHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASA 395
RH N++ L+G ++ + L+ E+ GTV +L K E A+A
Sbjct: 69 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQ----KLSKFDEQRTATYITELANA 123
Query: 396 LAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEY 455
L+Y H+ +IHRD+K N+LL S +K+ADFG S P + A GT Y+ PE
Sbjct: 124 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRAALCGTLDYLPPEM 180
Query: 456 HQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHR 490
+ +K D++S GV+ E + P + N ++
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 215
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 132/286 (46%), Gaps = 41/286 (14%)
Query: 290 LGDGGFGTVYYGKL--KDGREV--AVKRLYD-NNYRRVEQFMNEVEILTRLRHKNLVSLF 344
+G G FG VY+G L DG+++ AVK L + V QF+ E I+ H N++SL
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 345 GCTSRYSQGLLLVYEFVANGT----VADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
G R L+V ++ +G + ++ H K + ++ A + YL
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD-------LIGFGLQVAKGMKYLA 150
Query: 401 ASDIIHRDVKTNNILLDSNFCVKVADFGLSR-LFPLDV--THVSTAPQGTPGYVDPEYHQ 457
+ +HRD+ N +LD F VKVADFGL+R ++ + H T + ++ E Q
Sbjct: 151 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 210
Query: 458 CYQLTDKSDVYSFGVVLIELIS--SMPAVDMNRHRHEINLANLAINKIQKCAFDELIDPC 515
+ T KSDV+SFGV+L EL++ + P D +N ++ + +Q L+ P
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMTRGAPPYPD-------VNTFDITVYLLQG---RRLLQP- 259
Query: 516 LGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLAELQRIKS 561
+ + E+ C E+RPS E+++ + I S
Sbjct: 260 ---------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 296
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 137/296 (46%), Gaps = 41/296 (13%)
Query: 280 ATNDFSREKELGDGGFGTVY----YGKLKDGRE--VAVKRLYDN-NYRRVEQFMNEVEIL 332
A + +ELG G FG VY G +KD E VA+K + + + R +F+NE ++
Sbjct: 13 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 72
Query: 333 TRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDR---AKHGLLTWPI---RM 386
++V L G S+ Q L++ E + G + L R A + +L P +
Sbjct: 73 KEFNCHHVVRLLGVVSQ-GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMI 131
Query: 387 NIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQG 446
+A E A +AYL+A+ +HRD+ N ++ +F VK+ DFG++R D+ +G
Sbjct: 132 QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYETDYYRKG 187
Query: 447 TPG-----YVDPEYHQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHRHEINLANLAIN 501
G ++ PE + T SDV+SFGVVL E +A LA
Sbjct: 188 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWE------------------IATLAEQ 229
Query: 502 KIQKCAFDELIDPCLGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLAELQ 557
Q + ++++ + ++ + EL +C Q N ++RPS E+++ ++
Sbjct: 230 PYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 285
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 132/286 (46%), Gaps = 41/286 (14%)
Query: 290 LGDGGFGTVYYGKL--KDGREV--AVKRLYD-NNYRRVEQFMNEVEILTRLRHKNLVSLF 344
+G G FG VY+G L DG+++ AVK L + V QF+ E I+ H N++SL
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 92
Query: 345 GCTSRYSQGLLLVYEFVANGT----VADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
G R L+V ++ +G + ++ H K + ++ A + YL
Sbjct: 93 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD-------LIGFGLQVAKGMKYLA 145
Query: 401 ASDIIHRDVKTNNILLDSNFCVKVADFGLSR-LFPLDV--THVSTAPQGTPGYVDPEYHQ 457
+ +HRD+ N +LD F VKVADFGL+R ++ + H T + ++ E Q
Sbjct: 146 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 205
Query: 458 CYQLTDKSDVYSFGVVLIELIS--SMPAVDMNRHRHEINLANLAINKIQKCAFDELIDPC 515
+ T KSDV+SFGV+L EL++ + P D +N ++ + +Q L+ P
Sbjct: 206 TQKFTTKSDVWSFGVLLWELMTRGAPPYPD-------VNTFDITVYLLQG---RRLLQP- 254
Query: 516 LGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLAELQRIKS 561
+ + E+ C E+RPS E+++ + I S
Sbjct: 255 ---------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 291
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 144/298 (48%), Gaps = 34/298 (11%)
Query: 271 IFSYSDLAEATNDFSREKELGDGGFGTVYYGKLK--DGRE--VAVKRL---YDNNYRRVE 323
+ ++ +ATN S +K +G G FG V G+LK +E VA+K L Y RR
Sbjct: 35 VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR-- 91
Query: 324 QFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWP 383
F+ E I+ + H N++ L G ++ S+ +++V E++ NG++ L A+ ++
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTK-SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ-- 148
Query: 384 IRMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTA 443
+ + AS + YL +HRD+ NIL++SN KV+DFGL+R+ D T
Sbjct: 149 -LVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTT 207
Query: 444 PQGT--PGYVDPEYHQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHRHEINLANLAIN 501
G + PE + T SDV+S+G+VL E++S R ++N +
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY-------GERPYWEMSNQDVI 260
Query: 502 KIQKCAFDELIDPCLGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLAELQRI 559
K A DE G+ + ++ +L C Q+++ RP E++++ L ++
Sbjct: 261 K----AVDE------GYRLPPPMD-CPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 132/286 (46%), Gaps = 41/286 (14%)
Query: 290 LGDGGFGTVYYGKL--KDGREV--AVKRLYD-NNYRRVEQFMNEVEILTRLRHKNLVSLF 344
+G G FG VY+G L DG+++ AVK L + V QF+ E I+ H N++SL
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 345 GCTSRYSQGLLLVYEFVANGT----VADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
G R L+V ++ +G + ++ H K + ++ A + YL
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD-------LIGFGLQVAKGMKYLA 148
Query: 401 ASDIIHRDVKTNNILLDSNFCVKVADFGLSR-LFPLDV--THVSTAPQGTPGYVDPEYHQ 457
+ +HRD+ N +LD F VKVADFGL+R ++ + H T + ++ E Q
Sbjct: 149 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 208
Query: 458 CYQLTDKSDVYSFGVVLIELIS--SMPAVDMNRHRHEINLANLAINKIQKCAFDELIDPC 515
+ T KSDV+SFGV+L EL++ + P D +N ++ + +Q L+ P
Sbjct: 209 TQKFTTKSDVWSFGVLLWELMTRGAPPYPD-------VNTFDITVYLLQG---RRLLQP- 257
Query: 516 LGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLAELQRIKS 561
+ + E+ C E+RPS E+++ + I S
Sbjct: 258 ---------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 294
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 135/299 (45%), Gaps = 46/299 (15%)
Query: 282 NDFSREK-----ELGDGGFGTVYYGKLKD------GREVAVKRLYDN-NYRRVEQFMNEV 329
+ SREK ELG G FG VY G +D VAVK + ++ + R +F+NE
Sbjct: 11 GEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEA 70
Query: 330 EILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAK------HGLLTWP 383
++ ++V L G S+ Q L+V E +A+G + L R + T
Sbjct: 71 SVMKGFTCHHVVRLLGVVSK-GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQ 129
Query: 384 IRMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTA 443
+ +A E A +AYL+A +HRD+ N ++ +F VK+ DFG++R D+
Sbjct: 130 EMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR----DIYETDYY 185
Query: 444 PQGTPG-----YVDPEYHQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHRHEINLANL 498
+G G ++ PE + T SD++SFGVVL E+ S L
Sbjct: 186 RKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS------------------L 227
Query: 499 AINKIQKCAFDELIDPCLGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLAELQ 557
A Q + ++++ + ++ V +L +C Q N ++RP+ E++ L+
Sbjct: 228 AEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 286
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 144/305 (47%), Gaps = 42/305 (13%)
Query: 273 SYSDLAEATNDFSRE---------KELGDGGFGTVYYGKLK--DGRE--VAVKRL---YD 316
+Y D + ++F++E K +G G FG V G+LK +E VA+K L Y
Sbjct: 27 TYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 317 NNYRRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAK 376
RR F+ E I+ + H N++ L G ++ S+ +++V E + NG++ L A+
Sbjct: 87 EKQRR--DFLGEASIMGQFDHPNIIRLEGVVTK-SKPVMIVTEXMENGSLDSFLRKHDAQ 143
Query: 377 HGLLTWPIRMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLD 436
++ + + AS + YL +HRD+ NIL++SN KV+DFGLSR+ D
Sbjct: 144 FTVIQ---LVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 200
Query: 437 VTHVSTAPQGT--PGYVDPEYHQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHRHEIN 494
T G + PE + T SDV+S+G+VL E++S R
Sbjct: 201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY-------GERPYWE 253
Query: 495 LANLAINKIQKCAFDELIDPCLGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLA 554
++N + K A DE G+ + ++ +L C Q+++ RP E++++
Sbjct: 254 MSNQDVIK----AVDE------GYRLPPPMD-CPAALYQLMLDCWQKDRNNRPKFEQIVS 302
Query: 555 ELQRI 559
L ++
Sbjct: 303 ILDKL 307
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 103/215 (47%), Gaps = 12/215 (5%)
Query: 280 ATNDFSREKELGDGGFGTVYYGKLKDGREV-AVKRLYDNNYRRV---EQFMNEVEILTRL 335
A DF + LG G FG VY + K + + A+K L+ + Q EVEI + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 336 RHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASA 395
RH N++ L+G ++ + L+ E+ G V +L K E A+A
Sbjct: 71 RHPNILRLYGYFHDATR-VYLILEYAPRGEVYKELQ----KLSKFDEQRTATYITELANA 125
Query: 396 LAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEY 455
L+Y H+ +IHRD+K N+LL S +K+ADFG S P + T GT Y+ PE
Sbjct: 126 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGTLDYLPPEM 182
Query: 456 HQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHR 490
+ +K D++S GV+ E + P + N ++
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 217
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 132/286 (46%), Gaps = 41/286 (14%)
Query: 290 LGDGGFGTVYYGKL--KDGREV--AVKRLYD-NNYRRVEQFMNEVEILTRLRHKNLVSLF 344
+G G FG VY+G L DG+++ AVK L + V QF+ E I+ H N++SL
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 115
Query: 345 GCTSRYSQGLLLVYEFVANGT----VADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
G R L+V ++ +G + ++ H K + ++ A + YL
Sbjct: 116 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD-------LIGFGLQVAKGMKYLA 168
Query: 401 ASDIIHRDVKTNNILLDSNFCVKVADFGLSR-LFPLDV--THVSTAPQGTPGYVDPEYHQ 457
+ +HRD+ N +LD F VKVADFGL+R ++ + H T + ++ E Q
Sbjct: 169 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 228
Query: 458 CYQLTDKSDVYSFGVVLIELIS--SMPAVDMNRHRHEINLANLAINKIQKCAFDELIDPC 515
+ T KSDV+SFGV+L EL++ + P D +N ++ + +Q L+ P
Sbjct: 229 TQKFTTKSDVWSFGVLLWELMTRGAPPYPD-------VNTFDITVYLLQG---RRLLQP- 277
Query: 516 LGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLAELQRIKS 561
+ + E+ C E+RPS E+++ + I S
Sbjct: 278 ---------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 314
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 106/220 (48%), Gaps = 12/220 (5%)
Query: 268 GVPIFSYSDLAEATNDFSREKELGDGGFGTVYYGK-LKDGREVAVKRLYDN--NYRRVEQ 324
G I S +D ++ +K +G G F V + + GREVAVK + N +++
Sbjct: 1 GNSITSATDEQPHIGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQK 60
Query: 325 FMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPI 384
EV I+ L H N+V LF + L LV E+ + G V D L HG +
Sbjct: 61 LFREVRIMKILNHPNIVKLFEVIET-EKTLYLVMEYASGGEVFDYL----VAHGRMKEKE 115
Query: 385 RMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAP 444
+ SA+ Y H I+HRD+K N+LLD + +K+ADFG S F V +
Sbjct: 116 ARAKFRQIVSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFT--VGNKLDTF 173
Query: 445 QGTPGYVDPEYHQCYQLTD-KSDVYSFGVVLIELIS-SMP 482
G+P Y PE Q + + DV+S GV+L L+S S+P
Sbjct: 174 CGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 213
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 132/286 (46%), Gaps = 41/286 (14%)
Query: 290 LGDGGFGTVYYGKL--KDGREV--AVKRLYD-NNYRRVEQFMNEVEILTRLRHKNLVSLF 344
+G G FG VY+G L DG+++ AVK L + V QF+ E I+ H N++SL
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 94
Query: 345 GCTSRYSQGLLLVYEFVANGT----VADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
G R L+V ++ +G + ++ H K + ++ A + YL
Sbjct: 95 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD-------LIGFGLQVAKGMKYLA 147
Query: 401 ASDIIHRDVKTNNILLDSNFCVKVADFGLSR-LFPLDV--THVSTAPQGTPGYVDPEYHQ 457
+ +HRD+ N +LD F VKVADFGL+R ++ + H T + ++ E Q
Sbjct: 148 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 207
Query: 458 CYQLTDKSDVYSFGVVLIELIS--SMPAVDMNRHRHEINLANLAINKIQKCAFDELIDPC 515
+ T KSDV+SFGV+L EL++ + P D +N ++ + +Q L+ P
Sbjct: 208 TQKFTTKSDVWSFGVLLWELMTRGAPPYPD-------VNTFDITVYLLQG---RRLLQP- 256
Query: 516 LGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLAELQRIKS 561
+ + E+ C E+RPS E+++ + I S
Sbjct: 257 ---------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 293
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 132/286 (46%), Gaps = 41/286 (14%)
Query: 290 LGDGGFGTVYYGKL--KDGREV--AVKRLYD-NNYRRVEQFMNEVEILTRLRHKNLVSLF 344
+G G FG VY+G L DG+++ AVK L + V QF+ E I+ H N++SL
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 345 GCTSRYSQGLLLVYEFVANGT----VADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
G R L+V ++ +G + ++ H K + ++ A + YL
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD-------LIGFGLQVAKGMKYLA 149
Query: 401 ASDIIHRDVKTNNILLDSNFCVKVADFGLSR-LFPLDV--THVSTAPQGTPGYVDPEYHQ 457
+ +HRD+ N +LD F VKVADFGL+R ++ + H T + ++ E Q
Sbjct: 150 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 209
Query: 458 CYQLTDKSDVYSFGVVLIELIS--SMPAVDMNRHRHEINLANLAINKIQKCAFDELIDPC 515
+ T KSDV+SFGV+L EL++ + P D +N ++ + +Q L+ P
Sbjct: 210 TQKFTTKSDVWSFGVLLWELMTRGAPPYPD-------VNTFDITVYLLQG---RRLLQP- 258
Query: 516 LGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLAELQRIKS 561
+ + E+ C E+RPS E+++ + I S
Sbjct: 259 ---------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 295
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 103/193 (53%), Gaps = 7/193 (3%)
Query: 288 KELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCT 347
+ LG G FG V+ G +VAVK L + + F+ E ++ +L+H+ LV L+
Sbjct: 15 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVV 73
Query: 348 SRYSQGLLLVYEFVANGTVADQLHGDRAKHGL-LTWPIRMNIAIETASALAYLHASDIIH 406
++ + + ++ E++ NG++ D L + G+ LT +++A + A +A++ + IH
Sbjct: 74 TQ--EPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIH 128
Query: 407 RDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQLTDKSD 466
R+++ NIL+ K+ADFGL+RL + + + PE T KSD
Sbjct: 129 RNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 188
Query: 467 VYSFGVVLIELIS 479
V+SFG++L E+++
Sbjct: 189 VWSFGILLTEIVT 201
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 104/215 (48%), Gaps = 12/215 (5%)
Query: 280 ATNDFSREKELGDGGFGTVYYGKLKDGREV-AVKRLYDNNYRRV---EQFMNEVEILTRL 335
A DF + LG G FG VY + K + + A+K L+ + Q EVEI + L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 336 RHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASA 395
RH N++ L+G ++ + L+ E+ GTV +L K E A+A
Sbjct: 67 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQ----KLSKFDEQRTATYITELANA 121
Query: 396 LAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEY 455
L+Y H+ +IHRD+K N+LL S +K+ADFG S P + T GT Y+ PE
Sbjct: 122 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTDLCGTLDYLPPEM 178
Query: 456 HQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHR 490
+ +K D++S GV+ E + P + N ++
Sbjct: 179 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 213
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 132/286 (46%), Gaps = 41/286 (14%)
Query: 290 LGDGGFGTVYYGKL--KDGREV--AVKRLYD-NNYRRVEQFMNEVEILTRLRHKNLVSLF 344
+G G FG VY+G L DG+++ AVK L + V QF+ E I+ H N++SL
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 345 GCTSRYSQGLLLVYEFVANGT----VADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
G R L+V ++ +G + ++ H K + ++ A + YL
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD-------LIGFGLQVAKGMKYLA 150
Query: 401 ASDIIHRDVKTNNILLDSNFCVKVADFGLSR-LFPLDV--THVSTAPQGTPGYVDPEYHQ 457
+ +HRD+ N +LD F VKVADFGL+R ++ + H T + ++ E Q
Sbjct: 151 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 210
Query: 458 CYQLTDKSDVYSFGVVLIELIS--SMPAVDMNRHRHEINLANLAINKIQKCAFDELIDPC 515
+ T KSDV+SFGV+L EL++ + P D +N ++ + +Q L+ P
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMTRGAPPYPD-------VNTFDITVYLLQG---RRLLQP- 259
Query: 516 LGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLAELQRIKS 561
+ + E+ C E+RPS E+++ + I S
Sbjct: 260 ---------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 296
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 143/298 (47%), Gaps = 34/298 (11%)
Query: 271 IFSYSDLAEATNDFSREKELGDGGFGTVYYGKLK--DGRE--VAVKRL---YDNNYRRVE 323
+ ++ +ATN S +K +G G FG V G+LK +E VA+K L Y RR
Sbjct: 35 VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR-- 91
Query: 324 QFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWP 383
F+ E I+ + H N++ L G ++ S+ +++V E++ NG++ L A+ ++
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTK-SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ-- 148
Query: 384 IRMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTA 443
+ + AS + YL +HRD+ NIL++SN KV+DFGL R+ D T
Sbjct: 149 -LVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTT 207
Query: 444 PQGT--PGYVDPEYHQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHRHEINLANLAIN 501
G + PE + T SDV+S+G+VL E++S R ++N +
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY-------GERPYWEMSNQDVI 260
Query: 502 KIQKCAFDELIDPCLGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLAELQRI 559
K A DE G+ + ++ +L C Q+++ RP E++++ L ++
Sbjct: 261 K----AVDE------GYRLPPPMD-CPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 104/215 (48%), Gaps = 12/215 (5%)
Query: 280 ATNDFSREKELGDGGFGTVYYGKLKDGREV-AVKRLYDNNYRRV---EQFMNEVEILTRL 335
A DF + LG G FG VY + K + + A+K L+ + Q EVEI + L
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 336 RHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASA 395
RH N++ L+G ++ + L+ E+ GTV +L K E A+A
Sbjct: 65 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQ----KLSKFDEQRTATYITELANA 119
Query: 396 LAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEY 455
L+Y H+ +IHRD+K N+LL S +K+ADFG S P + T GT Y+ PE
Sbjct: 120 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGTLDYLPPEM 176
Query: 456 HQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHR 490
+ +K D++S GV+ E + P + N ++
Sbjct: 177 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 211
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 104/215 (48%), Gaps = 12/215 (5%)
Query: 280 ATNDFSREKELGDGGFGTVYYGKLKDGREV-AVKRLYDNNYRRV---EQFMNEVEILTRL 335
A DF + LG G FG VY + K + + A+K L+ + Q EVEI + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 336 RHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASA 395
RH N++ L+G ++ + L+ E+ GTV +L K E A+A
Sbjct: 66 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQ----KLSKFDEQRTATYITELANA 120
Query: 396 LAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEY 455
L+Y H+ +IHRD+K N+LL S +K+ADFG S P + A GT Y+ PE
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRAALCGTLDYLPPEM 177
Query: 456 HQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHR 490
+ +K D++S GV+ E + P + N ++
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 212
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 140/290 (48%), Gaps = 34/290 (11%)
Query: 279 EATNDFSREKELGDGGFGTVYYGKLK--DGRE--VAVKRL---YDNNYRRVEQFMNEVEI 331
+ATN S +K +G G FG V G+LK +E VA+K L Y RR F+ E I
Sbjct: 14 DATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR--DFLGEASI 70
Query: 332 LTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIE 391
+ + H N++ L G ++ S+ +++V E + NG++ L A+ ++ + +
Sbjct: 71 MGQFDHPNIIRLEGVVTK-SKPVMIVTEXMENGSLDSFLRKHDAQFTVIQ---LVGMLRG 126
Query: 392 TASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGT--PG 449
AS + YL +HRD+ NIL++SN KV+DFGLSR+ D T G
Sbjct: 127 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 186
Query: 450 YVDPEYHQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHRHEINLANLAINKIQKCAFD 509
+ PE + T SDV+S+G+VL E++S R ++N + K A D
Sbjct: 187 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSY-------GERPYWEMSNQDVIK----AVD 235
Query: 510 ELIDPCLGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLAELQRI 559
E G+ + ++ +L C Q+++ RP E++++ L ++
Sbjct: 236 E------GYRLPPPMD-CPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 278
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 131/295 (44%), Gaps = 27/295 (9%)
Query: 289 ELGDGGFGTV---YYGKLKD--GREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSL 343
+LG G FG+V Y L D G VAVK+L + + F E++IL L +V
Sbjct: 17 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 76
Query: 344 FGCT-SRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHAS 402
G + Q L LV E++ +G + D L RA+ L + + + + YL +
Sbjct: 77 RGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR---LDASRLLLYSSQICKGMEYLGSR 133
Query: 403 DIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVT-HVSTAPQGTP-GYVDPEYHQCYQ 460
+HRD+ NIL++S VK+ADFGL++L PLD +V P +P + PE
Sbjct: 134 RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNI 193
Query: 461 LTDKSDVYSFGVVLIELI-----SSMPAVDMNRHR-HEINLANLAINKIQKCAFDELIDP 514
+ +SDV+SFGVVL EL S P+ + R E ++ L+ L P
Sbjct: 194 FSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGSERDVPALSRLLELLEEGQRLPAP 253
Query: 515 CLGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLAELQRIKSGKSKFEIH 569
V EL LC + + RPS + +L + SG E H
Sbjct: 254 ----------PACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRGCETH 298
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 109/213 (51%), Gaps = 14/213 (6%)
Query: 280 ATNDFSREKELGDGGFGTVYYGKLK-DGREVAVKRLYDN---NYRRVEQFMNEVEILTRL 335
+ DF + LG G FG V+ + + +GR A+K L ++VE +E +L+ +
Sbjct: 4 SLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV 63
Query: 336 RHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASA 395
H ++ ++G T + +Q + ++ +++ G + L K P+ A E A
Sbjct: 64 THPFIIRMWG-TFQDAQQIFMIMDYIEGGELFSLLR----KSQRFPNPVAKFYAAEVCLA 118
Query: 396 LAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEY 455
L YLH+ DII+RD+K NILLD N +K+ DFG ++ P DVT+ GTP Y+ PE
Sbjct: 119 LEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVP-DVTYXLC---GTPDYIAPEV 174
Query: 456 HQCYQLTDKSDVYSFGVVLIELISSM-PAVDMN 487
D +SFG+++ E+++ P D N
Sbjct: 175 VSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSN 207
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 104/215 (48%), Gaps = 12/215 (5%)
Query: 280 ATNDFSREKELGDGGFGTVYYGKLKDGREV-AVKRLYDNNYRRV---EQFMNEVEILTRL 335
A DF + LG G FG VY + K + + A+K L+ + Q EVEI + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 336 RHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASA 395
RH N++ L+G ++ + L+ E+ GTV +L K E A+A
Sbjct: 71 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQ----KLSKFDEQRTATYITELANA 125
Query: 396 LAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEY 455
L+Y H+ +IHRD+K N+LL S +K+ADFG S P + T GT Y+ PE
Sbjct: 126 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTDLCGTLDYLPPEM 182
Query: 456 HQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHR 490
+ +K D++S GV+ E + P + N ++
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 217
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 104/215 (48%), Gaps = 12/215 (5%)
Query: 280 ATNDFSREKELGDGGFGTVYYGKLKDGREV-AVKRLYDNNYRRV---EQFMNEVEILTRL 335
A DF + LG G FG VY + K + + A+K L+ + Q EVEI + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 336 RHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASA 395
RH N++ L+G ++ + L+ E+ GTV +L K E A+A
Sbjct: 66 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQ----KLSKFDEQRTATYITELANA 120
Query: 396 LAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEY 455
L+Y H+ +IHRD+K N+LL S +K+ADFG S P + T GT Y+ PE
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTDLCGTLDYLPPEM 177
Query: 456 HQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHR 490
+ +K D++S GV+ E + P + N ++
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 212
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 104/215 (48%), Gaps = 12/215 (5%)
Query: 280 ATNDFSREKELGDGGFGTVYYGKLKDGREV-AVKRLYDNNYRRV---EQFMNEVEILTRL 335
A DF + LG G FG VY + K + + A+K L+ + Q EVEI + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 336 RHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASA 395
RH N++ L+G ++ + L+ E+ GTV +L K E A+A
Sbjct: 69 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQ----KLSKFDEQRTATYITELANA 123
Query: 396 LAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEY 455
L+Y H+ +IHRD+K N+LL S +K+ADFG S P + T GT Y+ PE
Sbjct: 124 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGTLDYLPPEM 180
Query: 456 HQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHR 490
+ +K D++S GV+ E + P + N ++
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 215
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 143/298 (47%), Gaps = 34/298 (11%)
Query: 271 IFSYSDLAEATNDFSREKELGDGGFGTVYYGKLK--DGRE--VAVKRL---YDNNYRRVE 323
+ ++ +ATN S +K +G G FG V G+LK +E VA+K L Y RR
Sbjct: 35 VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR-- 91
Query: 324 QFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWP 383
F+ E I+ + H N++ L G ++ S+ +++V E + NG++ L A+ ++
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTK-SKPVMIVTEXMENGSLDSFLRKHDAQFTVIQ-- 148
Query: 384 IRMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTA 443
+ + AS + YL +HRD+ NIL++SN KV+DFGLSR+ D T
Sbjct: 149 -LVGMLRGIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 444 PQGT--PGYVDPEYHQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHRHEINLANLAIN 501
G + PE + T SDV+S+G+VL E++S R ++N +
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY-------GERPYWEMSNQDVI 260
Query: 502 KIQKCAFDELIDPCLGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLAELQRI 559
K A DE G+ + ++ +L C Q+++ RP E++++ L ++
Sbjct: 261 K----AVDE------GYRLPPPMD-CPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 104/215 (48%), Gaps = 12/215 (5%)
Query: 280 ATNDFSREKELGDGGFGTVYYGKLKDGREV-AVKRLYDNNYRRV---EQFMNEVEILTRL 335
A DF + LG G FG VY + K + + A+K L+ + Q EVEI + L
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 336 RHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASA 395
RH N++ L+G ++ + L+ E+ GTV +L K E A+A
Sbjct: 70 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQ----KLSKFDEQRTATYITELANA 124
Query: 396 LAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEY 455
L+Y H+ +IHRD+K N+LL S +K+ADFG S P + T GT Y+ PE
Sbjct: 125 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGTLDYLPPEM 181
Query: 456 HQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHR 490
+ +K D++S GV+ E + P + N ++
Sbjct: 182 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 216
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 104/215 (48%), Gaps = 12/215 (5%)
Query: 280 ATNDFSREKELGDGGFGTVYYGKLKDGREV-AVKRLYDNNYRRV---EQFMNEVEILTRL 335
A DF + LG G FG VY + K + + A+K L+ + Q EVEI + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 336 RHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASA 395
RH N++ L+G ++ + L+ E+ GTV +L K E A+A
Sbjct: 66 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQ----KLSKFDEQRTATYITELANA 120
Query: 396 LAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEY 455
L+Y H+ +IHRD+K N+LL S +K+ADFG S P + T GT Y+ PE
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTXLCGTLDYLPPEM 177
Query: 456 HQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHR 490
+ +K D++S GV+ E + P + N ++
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 212
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 104/215 (48%), Gaps = 12/215 (5%)
Query: 280 ATNDFSREKELGDGGFGTVYYGKLKDGREV-AVKRLYDNNYRRV---EQFMNEVEILTRL 335
A DF + LG G FG VY + K + + A+K L+ + Q EVEI + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 336 RHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASA 395
RH N++ L+G ++ + L+ E+ GTV +L K E A+A
Sbjct: 66 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQ----KLSKFDEQRTATYITELANA 120
Query: 396 LAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEY 455
L+Y H+ +IHRD+K N+LL S +K+ADFG S P + T GT Y+ PE
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTDLCGTLDYLPPEM 177
Query: 456 HQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHR 490
+ +K D++S GV+ E + P + N ++
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 212
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 131/295 (44%), Gaps = 27/295 (9%)
Query: 289 ELGDGGFGTV---YYGKLKD--GREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSL 343
+LG G FG+V Y L D G VAVK+L + + F E++IL L +V
Sbjct: 30 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 89
Query: 344 FGCT-SRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHAS 402
G + Q L LV E++ +G + D L RA+ L + + + + YL +
Sbjct: 90 RGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR---LDASRLLLYSSQICKGMEYLGSR 146
Query: 403 DIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVT-HVSTAPQGTP-GYVDPEYHQCYQ 460
+HRD+ NIL++S VK+ADFGL++L PLD +V P +P + PE
Sbjct: 147 RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNI 206
Query: 461 LTDKSDVYSFGVVLIELI-----SSMPAVDMNRHRH-EINLANLAINKIQKCAFDELIDP 514
+ +SDV+SFGVVL EL S P+ + R E ++ L+ L P
Sbjct: 207 FSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLPAP 266
Query: 515 CLGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLAELQRIKSGKSKFEIH 569
V EL LC + + RPS + +L + SG E H
Sbjct: 267 ----------PACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRGCETH 311
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 104/214 (48%), Gaps = 20/214 (9%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKDGREV-AVKRLYDNNYRRV---EQFMNEVEILTRLRH 337
DF + LG G FG VY + + + + A+K L+ + Q EVEI + LRH
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
N++ L+G ++ + L+ E+ GTV +L K E A+AL+
Sbjct: 72 PNILRLYGYFHDATR-VYLILEYAPLGTVYRELQ----KLSRFDEQRTATYITELANALS 126
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQ----GTPGYVDP 453
Y H+ +IHRD+K N+LL SN +K+ADFG S H ++ + GT Y+ P
Sbjct: 127 YCHSKRVIHRDIKPENLLLGSNGELKIADFGWS-------VHAPSSRRDTLCGTLDYLPP 179
Query: 454 EYHQCYQLTDKSDVYSFGVVLIELISSMPAVDMN 487
E + +K D++S GV+ E + MP + +
Sbjct: 180 EMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAH 213
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 111/218 (50%), Gaps = 27/218 (12%)
Query: 280 ATNDFSREKELGDGGFGTVYYGKL-KDGREVAVKRLYDNN-------YRRVEQFMNEVEI 331
A N+ EK++G GGFG V+ G+L KD VA+K L + + ++F EV I
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 332 LTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIE 391
++ L H N+V L+G + +V EFV G + +L D+A + W +++ + ++
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPR---MVMEFVPCGDLYHRLL-DKAHP--IKWSVKLRLMLD 130
Query: 392 TASALAYLHASD--IIHRDVKTNNILLDS-----NFCVKVADFGLSRLFPLDVTHVSTAP 444
A + Y+ + I+HRD+++ NI L S C KVADFG S+ H +
Sbjct: 131 IALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ----QSVHSVSGL 186
Query: 445 QGTPGYVDPEYHQCYQ--LTDKSDVYSFGVVLIELISS 480
G ++ PE + T+K+D YSF ++L +++
Sbjct: 187 LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTG 224
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 106/220 (48%), Gaps = 12/220 (5%)
Query: 268 GVPIFSYSDLAEATNDFSREKELGDGGFGTVYYGK-LKDGREVAVKRLYDN--NYRRVEQ 324
G I S +D ++ K +G G F V + + GREVA+K + N +++
Sbjct: 1 GNSIASCADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQK 60
Query: 325 FMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPI 384
EV I+ L H N+V LF + L L+ E+ + G V D L HG +
Sbjct: 61 LFREVRIMKILNHPNIVKLFEVIET-EKTLYLIMEYASGGEVFDYL----VAHGRMKEKE 115
Query: 385 RMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAP 444
+ + SA+ Y H I+HRD+K N+LLD++ +K+ADFG S F V A
Sbjct: 116 ARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFT--VGGKLDAF 173
Query: 445 QGTPGYVDPEYHQCYQLTD-KSDVYSFGVVLIELIS-SMP 482
G P Y PE Q + + DV+S GV+L L+S S+P
Sbjct: 174 CGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 213
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 140/305 (45%), Gaps = 41/305 (13%)
Query: 271 IFSYSDLAEATNDFSREKELGDGGFGTVY----YGKLKDGRE--VAVKRLYDN-NYRRVE 323
+F + A + +ELG G FG VY G +KD E VA+K + + + R
Sbjct: 5 VFVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 64
Query: 324 QFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAK---HGLL 380
+F+NE ++ ++V L G S+ Q L++ E + G + L R + + +L
Sbjct: 65 EFLNEASVMKEFNCHHVVRLLGVVSQ-GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 123
Query: 381 TWPI---RMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDV 437
P + +A E A +AYL+A+ +HRD+ N ++ +F VK+ DFG++R D+
Sbjct: 124 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR----DI 179
Query: 438 THVSTAPQGTPG-----YVDPEYHQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHRHE 492
+G G ++ PE + T SDV+SFGVVL E
Sbjct: 180 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWE---------------- 223
Query: 493 INLANLAINKIQKCAFDELIDPCLGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEV 552
+A LA Q + ++++ + ++ + EL +C Q N ++RPS E+
Sbjct: 224 --IATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEI 281
Query: 553 LAELQ 557
++ ++
Sbjct: 282 ISSIK 286
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 105/219 (47%), Gaps = 20/219 (9%)
Query: 280 ATNDFSREKELGDGGFGTVYYGKLKDGREV-AVKRLYDNNYRRV---EQFMNEVEILTRL 335
A DF + LG G FG VY + K + + A+K L+ + Q EVEI + L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 336 RHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASA 395
RH N++ L+G ++ + L+ E+ GTV +L K E A+A
Sbjct: 68 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQ----KLSKFDEQRTATYITELANA 122
Query: 396 LAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQ----GTPGYV 451
L+Y H+ +IHRD+K N+LL S +K+ADFG S H ++ + GT Y+
Sbjct: 123 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRXXLCGTLDYL 175
Query: 452 DPEYHQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHR 490
PE + +K D++S GV+ E + P + N ++
Sbjct: 176 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 214
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 105/219 (47%), Gaps = 20/219 (9%)
Query: 280 ATNDFSREKELGDGGFGTVYYGKLKDGREV-AVKRLYDNNYRRV---EQFMNEVEILTRL 335
A DF + LG G FG VY + K + + A+K L+ + Q EVEI + L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 336 RHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASA 395
RH N++ L+G ++ + L+ E+ GTV +L K E A+A
Sbjct: 67 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQ----KLSKFDEQRTATYITELANA 121
Query: 396 LAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQ----GTPGYV 451
L+Y H+ +IHRD+K N+LL S +K+ADFG S H ++ + GT Y+
Sbjct: 122 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRDTLCGTLDYL 174
Query: 452 DPEYHQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHR 490
PE + +K D++S GV+ E + P + N ++
Sbjct: 175 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 213
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 137/296 (46%), Gaps = 41/296 (13%)
Query: 280 ATNDFSREKELGDGGFGTVY----YGKLKDGRE--VAVKRLYDN-NYRRVEQFMNEVEIL 332
A + +ELG G FG VY G +KD E VA+K + + + R +F+NE ++
Sbjct: 23 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 82
Query: 333 TRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAK---HGLLTWPI---RM 386
++V L G S+ Q L++ E + G + L R + + +L P +
Sbjct: 83 KEFNCHHVVRLLGVVSQ-GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 141
Query: 387 NIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQG 446
+A E A +AYL+A+ +HRD+ N ++ +F VK+ DFG++R D+ +G
Sbjct: 142 QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYETDYYRKG 197
Query: 447 TPG-----YVDPEYHQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHRHEINLANLAIN 501
G ++ PE + T SDV+SFGVVL E +A LA
Sbjct: 198 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWE------------------IATLAEQ 239
Query: 502 KIQKCAFDELIDPCLGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLAELQ 557
Q + ++++ + ++ + EL +C Q N ++RPS E+++ ++
Sbjct: 240 PYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 295
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 130/295 (44%), Gaps = 27/295 (9%)
Query: 289 ELGDGGFGTV---YYGKLKD--GREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSL 343
+LG G FG+V Y L D G VAVK+L + + F E++IL L +V
Sbjct: 18 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 77
Query: 344 FGCT-SRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHAS 402
G + Q L LV E++ +G + D L RA+ L + + + + YL +
Sbjct: 78 RGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR---LDASRLLLYSSQICKGMEYLGSR 134
Query: 403 DIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVT-HVSTAPQGTP-GYVDPEYHQCYQ 460
+HRD+ NIL++S VK+ADFGL++L PLD +V P +P + PE
Sbjct: 135 RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNI 194
Query: 461 LTDKSDVYSFGVVLIELI-----SSMPAVDMNRHRH-EINLANLAINKIQKCAFDELIDP 514
+ +SDV+SFGVVL EL S P+ + R E ++ L L P
Sbjct: 195 FSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALCRLLELLEEGQRLPAP 254
Query: 515 CLGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLAELQRIKSGKSKFEIH 569
V EL LC + + RPS + +L + SG E H
Sbjct: 255 ----------PACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRGCETH 299
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 102/215 (47%), Gaps = 12/215 (5%)
Query: 280 ATNDFSREKELGDGGFGTVYYGKLKDGREV-AVKRLYDNNYRRV---EQFMNEVEILTRL 335
A DF + LG G FG VY + K + + A+K L+ + Q EVEI + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 336 RHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASA 395
RH N++ L+G ++ + L+ E+ G V +L K E A+A
Sbjct: 71 RHPNILRLYGYFHDATR-VYLILEYAPRGEVYKELQ----KLSKFDEQRTATYITELANA 125
Query: 396 LAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEY 455
L+Y H+ +IHRD+K N+LL S +K+ADFG S P + GT Y+ PE
Sbjct: 126 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRXXLXGTLDYLPPEM 182
Query: 456 HQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHR 490
+ +K D++S GV+ E + P + N ++
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 217
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 108/218 (49%), Gaps = 27/218 (12%)
Query: 280 ATNDFSREKELGDGGFGTVYYGKL-KDGREVAVKRLYDNN-------YRRVEQFMNEVEI 331
A N+ EK++G GGFG V+ G+L KD VA+K L + + ++F EV I
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 332 LTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIE 391
++ L H N+V L+G + +V EFV G D H K + W +++ + ++
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPR---MVMEFVPCG---DLYHRLLDKAHPIKWSVKLRLMLD 130
Query: 392 TASALAYLHASD--IIHRDVKTNNILLDS-----NFCVKVADFGLSRLFPLDVTHVSTAP 444
A + Y+ + I+HRD+++ NI L S C KVADF LS+ H +
Sbjct: 131 IALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ----QSVHSVSGL 186
Query: 445 QGTPGYVDPEYHQCYQ--LTDKSDVYSFGVVLIELISS 480
G ++ PE + T+K+D YSF ++L +++
Sbjct: 187 LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTG 224
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 137/296 (46%), Gaps = 41/296 (13%)
Query: 280 ATNDFSREKELGDGGFGTVY----YGKLKDGRE--VAVKRLYDN-NYRRVEQFMNEVEIL 332
A + +ELG G FG VY G +KD E VA+K + + + R +F+NE ++
Sbjct: 16 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 75
Query: 333 TRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAK---HGLLTWPI---RM 386
++V L G S+ Q L++ E + G + L R + + +L P +
Sbjct: 76 KEFNCHHVVRLLGVVSQ-GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 134
Query: 387 NIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQG 446
+A E A +AYL+A+ +HRD+ N ++ +F VK+ DFG++R D+ +G
Sbjct: 135 QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYETDYYRKG 190
Query: 447 TPG-----YVDPEYHQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHRHEINLANLAIN 501
G ++ PE + T SDV+SFGVVL E +A LA
Sbjct: 191 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWE------------------IATLAEQ 232
Query: 502 KIQKCAFDELIDPCLGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLAELQ 557
Q + ++++ + ++ + EL +C Q N ++RPS E+++ ++
Sbjct: 233 PYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 288
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 137/296 (46%), Gaps = 41/296 (13%)
Query: 280 ATNDFSREKELGDGGFGTVY----YGKLKDGRE--VAVKRLYDN-NYRRVEQFMNEVEIL 332
A + +ELG G FG VY G +KD E VA+K + + + R +F+NE ++
Sbjct: 17 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 76
Query: 333 TRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAK---HGLLTWPI---RM 386
++V L G S+ Q L++ E + G + L R + + +L P +
Sbjct: 77 KEFNCHHVVRLLGVVSQ-GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 135
Query: 387 NIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQG 446
+A E A +AYL+A+ +HRD+ N ++ +F VK+ DFG++R D+ +G
Sbjct: 136 QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYETDYYRKG 191
Query: 447 TPG-----YVDPEYHQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHRHEINLANLAIN 501
G ++ PE + T SDV+SFGVVL E +A LA
Sbjct: 192 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWE------------------IATLAEQ 233
Query: 502 KIQKCAFDELIDPCLGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLAELQ 557
Q + ++++ + ++ + EL +C Q N ++RPS E+++ ++
Sbjct: 234 PYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 289
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 137/296 (46%), Gaps = 41/296 (13%)
Query: 280 ATNDFSREKELGDGGFGTVY----YGKLKDGRE--VAVKRLYDN-NYRRVEQFMNEVEIL 332
A + +ELG G FG VY G +KD E VA+K + + + R +F+NE ++
Sbjct: 10 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 69
Query: 333 TRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAK---HGLLTWPI---RM 386
++V L G S+ Q L++ E + G + L R + + +L P +
Sbjct: 70 KEFNCHHVVRLLGVVSQ-GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 128
Query: 387 NIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQG 446
+A E A +AYL+A+ +HRD+ N ++ +F VK+ DFG++R D+ +G
Sbjct: 129 QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYETDYYRKG 184
Query: 447 TPG-----YVDPEYHQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHRHEINLANLAIN 501
G ++ PE + T SDV+SFGVVL E +A LA
Sbjct: 185 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWE------------------IATLAEQ 226
Query: 502 KIQKCAFDELIDPCLGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLAELQ 557
Q + ++++ + ++ + EL +C Q N ++RPS E+++ ++
Sbjct: 227 PYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 282
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 104/215 (48%), Gaps = 12/215 (5%)
Query: 280 ATNDFSREKELGDGGFGTVYYGKLKDGREV-AVKRLYDNNYRRV---EQFMNEVEILTRL 335
A DF + LG G FG VY + K + + A+K L+ + Q EVEI + L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 336 RHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASA 395
RH N++ L+G ++ + L+ E+ GTV +L K E A+A
Sbjct: 68 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQ----KLSKFDEQRTATYITELANA 122
Query: 396 LAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEY 455
L+Y H+ +IHRD+K N+LL S +K+A+FG S P + T GT Y+ PE
Sbjct: 123 LSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAP---SSRRTTLCGTLDYLPPEM 179
Query: 456 HQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHR 490
+ +K D++S GV+ E + P + N ++
Sbjct: 180 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 214
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 104/215 (48%), Gaps = 12/215 (5%)
Query: 280 ATNDFSREKELGDGGFGTVYYGKLKDGREV-AVKRLYDNNYRRV---EQFMNEVEILTRL 335
A DF + LG G FG VY + K + + A+K L+ + Q EVEI + L
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 336 RHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASA 395
RH N++ L+G ++ + L+ E+ GTV +L K E A+A
Sbjct: 63 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQ----KLSKFDEQRTATYITELANA 117
Query: 396 LAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEY 455
L+Y H+ +IHRD+K N+LL S +K+ADFG S P + T GT Y+ PE
Sbjct: 118 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGTLDYLPPEM 174
Query: 456 HQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHR 490
+ +K D++S GV+ E + P + N ++
Sbjct: 175 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 209
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 137/296 (46%), Gaps = 41/296 (13%)
Query: 280 ATNDFSREKELGDGGFGTVY----YGKLKDGRE--VAVKRLYDN-NYRRVEQFMNEVEIL 332
A + +ELG G FG VY G +KD E VA+K + + + R +F+NE ++
Sbjct: 16 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 75
Query: 333 TRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAK---HGLLTWPI---RM 386
++V L G S+ Q L++ E + G + L R + + +L P +
Sbjct: 76 KEFNCHHVVRLLGVVSQ-GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 134
Query: 387 NIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQG 446
+A E A +AYL+A+ +HRD+ N ++ +F VK+ DFG++R D+ +G
Sbjct: 135 QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYETDYYRKG 190
Query: 447 TPG-----YVDPEYHQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHRHEINLANLAIN 501
G ++ PE + T SDV+SFGVVL E +A LA
Sbjct: 191 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWE------------------IATLAEQ 232
Query: 502 KIQKCAFDELIDPCLGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLAELQ 557
Q + ++++ + ++ + EL +C Q N ++RPS E+++ ++
Sbjct: 233 PYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 288
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 150/333 (45%), Gaps = 49/333 (14%)
Query: 251 FQCENERTDLETGTVYFGV--PIFSYSDL------AEATNDFSREKELGDGGFGTVY--- 299
F + + L G +Y V FS +D+ A + +ELG G FG VY
Sbjct: 8 FHRKRNNSRLGNGVLYASVNPEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGV 67
Query: 300 -YGKLKDGRE--VAVKRLYDN-NYRRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLL 355
G +KD E VA+K + + + R +F+NE ++ ++V L G S+ Q L
Sbjct: 68 AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ-GQPTL 126
Query: 356 LVYEFVANGTVADQLHGDRAK---HGLLTWPI---RMNIAIETASALAYLHASDIIHRDV 409
++ E + G + L R + + +L P + +A E A +AYL+A+ +HRD+
Sbjct: 127 VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDL 186
Query: 410 KTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPG-----YVDPEYHQCYQLTDK 464
N ++ +F VK+ DFG++R D+ +G G ++ PE + T
Sbjct: 187 AARNCMVAEDFTVKIGDFGMTR----DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTY 242
Query: 465 SDVYSFGVVLIELISSMPAVDMNRHRHEINLANLAINKIQKCAFDELIDPCLGFESDEEV 524
SDV+SFGVVL E +A LA Q + ++++ + ++
Sbjct: 243 SDVWSFGVVLWE------------------IATLAEQPYQGLSNEQVLRFVMEGGLLDKP 284
Query: 525 KRMTTSVAELAFLCLQQNKELRPSMEEVLAELQ 557
+ EL +C Q N ++RPS E+++ ++
Sbjct: 285 DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 317
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 105/219 (47%), Gaps = 20/219 (9%)
Query: 280 ATNDFSREKELGDGGFGTVYYGKLKDGREV-AVKRLYDNNYRRV---EQFMNEVEILTRL 335
A DF + LG G FG VY + K + + A+K L+ + Q EVEI + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 336 RHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASA 395
RH N++ L+G ++ + L+ E+ GTV +L K E A+A
Sbjct: 69 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQ----KLSKFDEQRTATYITELANA 123
Query: 396 LAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQ----GTPGYV 451
L+Y H+ +IHRD+K N+LL S +K+ADFG S H ++ + GT Y+
Sbjct: 124 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRXXLCGTLDYL 176
Query: 452 DPEYHQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHR 490
PE + +K D++S GV+ E + P + N ++
Sbjct: 177 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 215
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 105/219 (47%), Gaps = 20/219 (9%)
Query: 280 ATNDFSREKELGDGGFGTVYYGKLKDGREV-AVKRLYDNNYRRV---EQFMNEVEILTRL 335
A DF + LG G FG VY + K + + A+K L+ + Q EVEI + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 336 RHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASA 395
RH N++ L+G ++ + L+ E+ GTV +L K E A+A
Sbjct: 66 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQ----KLSKFDEQRTATYITELANA 120
Query: 396 LAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQ----GTPGYV 451
L+Y H+ +IHRD+K N+LL S +K+ADFG S H ++ + GT Y+
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRXXLCGTLDYL 173
Query: 452 DPEYHQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHR 490
PE + +K D++S GV+ E + P + N ++
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 212
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 105/219 (47%), Gaps = 20/219 (9%)
Query: 280 ATNDFSREKELGDGGFGTVYYGKLKDGREV-AVKRLYDNNYRRV---EQFMNEVEILTRL 335
A DF + LG G FG VY + K + + A+K L+ + Q EVEI + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 336 RHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASA 395
RH N++ L+G ++ + L+ E+ GTV +L K E A+A
Sbjct: 69 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQ----KLSKFDEQRTATYITELANA 123
Query: 396 LAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQ----GTPGYV 451
L+Y H+ +IHRD+K N+LL S +K+ADFG S H ++ + GT Y+
Sbjct: 124 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRDDLCGTLDYL 176
Query: 452 DPEYHQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHR 490
PE + +K D++S GV+ E + P + N ++
Sbjct: 177 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 215
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 130/277 (46%), Gaps = 44/277 (15%)
Query: 287 EKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
E+ +G G FG V K + ++VA+K++ + R+ F+ E+ L+R+ H N+V L+G
Sbjct: 14 EEVVGRGAFGVVCKAKWR-AKDVAIKQIESESERKA--FIVELRQLSRVNHPNIVKLYGA 70
Query: 347 TSRYSQGLLLVYEFVANGTVADQLHGDR------AKHGLLTWPIRMNIAIETASALAYLH 400
+ LV E+ G++ + LHG A H M+ ++ + +AYLH
Sbjct: 71 CL---NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHA-------MSWCLQCSQGVAYLH 120
Query: 401 ASD---IIHRDVKTNNILLDSNFCV-KVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYH 456
+ +IHRD+K N+LL + V K+ DFG + D+ T +G+ ++ PE
Sbjct: 121 SMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA----CDIQTHMTNNKGSAAWMAPEVF 176
Query: 457 QCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHRHEINLANLAINKIQKCAFDELIDPCL 516
+ ++K DV+S+G++L E+I+ D EI I A P L
Sbjct: 177 EGSNYSEKCDVFSWGIILWEVITRRKPFD------EIGGPAFRI----MWAVHNGTRPPL 226
Query: 517 GFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVL 553
+K + + L C ++ RPSMEE++
Sbjct: 227 -------IKNLPKPIESLMTRCWSKDPSQRPSMEEIV 256
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 101/193 (52%), Gaps = 7/193 (3%)
Query: 288 KELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCT 347
+ LG G G V+ G +VAVK L + + F+ E ++ +L+H+ LV L+
Sbjct: 19 ERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 348 SRYSQGLLLVYEFVANGTVADQLHGDRAKHGL-LTWPIRMNIAIETASALAYLHASDIIH 406
++ + + ++ E++ NG++ D L + G+ LT +++A + A +A++ + IH
Sbjct: 78 TQ--EPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIH 132
Query: 407 RDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQLTDKSD 466
RD++ NIL+ K+ADFGL+RL + + PE T KSD
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSD 192
Query: 467 VYSFGVVLIELIS 479
V+SFG++L E+++
Sbjct: 193 VWSFGILLTEIVT 205
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 104/215 (48%), Gaps = 12/215 (5%)
Query: 280 ATNDFSREKELGDGGFGTVYYGKLKDGREV-AVKRLYDNNYRRV---EQFMNEVEILTRL 335
A DF + LG G FG VY + K + + A+K L+ + Q EVEI + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 336 RHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASA 395
RH N++ L+G ++ + L+ E+ GTV +L K E A+A
Sbjct: 69 RHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQ----KLSKFDEQRTATYITELANA 123
Query: 396 LAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEY 455
L+Y H+ +IHRD+K N+LL S +K+A+FG S P + T GT Y+ PE
Sbjct: 124 LSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAP---SSRRTTLCGTLDYLPPEM 180
Query: 456 HQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHR 490
+ +K D++S GV+ E + P + N ++
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 215
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 134/298 (44%), Gaps = 46/298 (15%)
Query: 283 DFSREK-----ELGDGGFGTVYYGKLKD------GREVAVKRLYDN-NYRRVEQFMNEVE 330
+ SREK ELG G FG VY G +D VAVK + ++ + R +F+NE
Sbjct: 14 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 73
Query: 331 ILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAK------HGLLTWPI 384
++ ++V L G S+ Q L+V E +A+G + L R + T
Sbjct: 74 VMKGFTCHHVVRLLGVVSK-GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQE 132
Query: 385 RMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAP 444
+ +A E A +AYL+A +HR++ N ++ +F VK+ DFG++R D+
Sbjct: 133 MIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTR----DIYETDYYR 188
Query: 445 QGTPG-----YVDPEYHQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHRHEINLANLA 499
+G G ++ PE + T SD++SFGVVL E+ S LA
Sbjct: 189 KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS------------------LA 230
Query: 500 INKIQKCAFDELIDPCLGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLAELQ 557
Q + ++++ + ++ V +L +C Q N +RP+ E++ L+
Sbjct: 231 EQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 288
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 108/213 (50%), Gaps = 25/213 (11%)
Query: 283 DFSREKELGDGGFGTVYYGKLKDGREVAVKRLY----DNNYRRVEQFMNEVEILTRLRHK 338
+ + E+ +G GGFG VY G EVAVK ++ + +E E ++ L+H
Sbjct: 8 ELTLEEIIGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHP 66
Query: 339 NLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAY 398
N+++L G + L LV EF G + L G R +L +N A++ A + Y
Sbjct: 67 NIIALRGVCLK-EPNLCLVMEFARGGPLNRVLSGKRIPPDIL-----VNWAVQIARGMNY 120
Query: 399 LH---ASDIIHRDVKTNNILLD--------SNFCVKVADFGLSRLFPLDVTHVSTAPQGT 447
LH IIHRD+K++NIL+ SN +K+ DFGL+R + T +S A G
Sbjct: 121 LHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWH-RTTKMSAA--GA 177
Query: 448 PGYVDPEYHQCYQLTDKSDVYSFGVVLIELISS 480
++ PE + + SDV+S+GV+L EL++
Sbjct: 178 YAWMAPEVIRASMFSKGSDVWSYGVLLWELLTG 210
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 130/277 (46%), Gaps = 44/277 (15%)
Query: 287 EKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
E+ +G G FG V K + ++VA+K++ + R+ F+ E+ L+R+ H N+V L+G
Sbjct: 13 EEVVGRGAFGVVCKAKWR-AKDVAIKQIESESERKA--FIVELRQLSRVNHPNIVKLYGA 69
Query: 347 TSRYSQGLLLVYEFVANGTVADQLHGDR------AKHGLLTWPIRMNIAIETASALAYLH 400
+ LV E+ G++ + LHG A H M+ ++ + +AYLH
Sbjct: 70 CL---NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHA-------MSWCLQCSQGVAYLH 119
Query: 401 ASD---IIHRDVKTNNILLDSNFCV-KVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYH 456
+ +IHRD+K N+LL + V K+ DFG + D+ T +G+ ++ PE
Sbjct: 120 SMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA----CDIQTHMTNNKGSAAWMAPEVF 175
Query: 457 QCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHRHEINLANLAINKIQKCAFDELIDPCL 516
+ ++K DV+S+G++L E+I+ D EI I A P L
Sbjct: 176 EGSNYSEKCDVFSWGIILWEVITRRKPFD------EIGGPAFRI----MWAVHNGTRPPL 225
Query: 517 GFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVL 553
+K + + L C ++ RPSMEE++
Sbjct: 226 -------IKNLPKPIESLMTRCWSKDPSQRPSMEEIV 255
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 134/298 (44%), Gaps = 46/298 (15%)
Query: 283 DFSREK-----ELGDGGFGTVYYGKLKD------GREVAVKRLYDN-NYRRVEQFMNEVE 330
+ SREK ELG G FG VY G +D VAVK + ++ + R +F+NE
Sbjct: 13 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 72
Query: 331 ILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAK------HGLLTWPI 384
++ ++V L G S+ Q L+V E +A+G + L R + T
Sbjct: 73 VMKGFTCHHVVRLLGVVSK-GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQE 131
Query: 385 RMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAP 444
+ +A E A +AYL+A +HR++ N ++ +F VK+ DFG++R D+
Sbjct: 132 MIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTR----DIYETDYYR 187
Query: 445 QGTPG-----YVDPEYHQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHRHEINLANLA 499
+G G ++ PE + T SD++SFGVVL E+ S LA
Sbjct: 188 KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS------------------LA 229
Query: 500 INKIQKCAFDELIDPCLGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLAELQ 557
Q + ++++ + ++ V +L +C Q N +RP+ E++ L+
Sbjct: 230 EQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 287
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 108/213 (50%), Gaps = 12/213 (5%)
Query: 273 SYSDLAEATNDFSREKELGDGGFGTVYYG-KLKDGREVAVKRLYDNNYRRVEQFMNEVEI 331
S + + ++R +++G G GTVY + G+EVA++++ + E +NE+ +
Sbjct: 11 SIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILV 70
Query: 332 LTRLRHKNLVSLFGCTSRYSQG--LLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIA 389
+ ++ N+V+ Y G L +V E++A G++ D + G + R
Sbjct: 71 MRENKNPNIVNYL---DSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR---- 123
Query: 390 IETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPG 449
E AL +LH++ +IHRD+K++NILL + VK+ DFG + + ST GTP
Sbjct: 124 -ECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM-VGTPY 181
Query: 450 YVDPEYHQCYQLTDKSDVYSFGVVLIELISSMP 482
++ PE K D++S G++ IE+I P
Sbjct: 182 WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEP 214
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 109/225 (48%), Gaps = 24/225 (10%)
Query: 273 SYSDLAEATNDFSREKE---------LGDGGFGTVYYGKLK--DGREV-----AVKRLYD 316
+Y + A F+RE E +G G G V YG+L+ R+V A+K Y
Sbjct: 31 TYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYT 90
Query: 317 NNYRRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAK 376
RR F++E I+ + H N++ L G +R + ++V E++ NG++ L R
Sbjct: 91 ERQRR--DFLSEASIMGQFDHPNIIRLEGVVTR-GRLAMIVTEYMENGSLDTFL---RTH 144
Query: 377 HGLLTWPIRMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFP-- 434
G T + + + + YL +HRD+ N+L+DSN KV+DFGLSR+
Sbjct: 145 DGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDD 204
Query: 435 LDVTHVSTAPQGTPGYVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
D + +T + + PE + SDV+SFGVV+ E+++
Sbjct: 205 PDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 119/249 (47%), Gaps = 30/249 (12%)
Query: 284 FSREKELGDGGFGTVYYGK-LKDGREVAVKRLYDNNYRRVEQF---MNEVEILTRLRHKN 339
FS +E+G G FG VY+ + +++ VA+K++ + + E++ + EV L +LRH N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 340 LVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIR-MNIAIETASAL-- 396
+ GC R LV E+ G+ +D L + P++ + IA T AL
Sbjct: 116 TIQYRGCYLR-EHTAWLVMEYCL-GSASDLLEVHKK-------PLQEVEIAAVTHGALQG 166
Query: 397 -AYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEY 455
AYLH+ ++IHRDVK NILL VK+ DFG + + V GTP ++ PE
Sbjct: 167 LAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV-----GTPYWMAPEV 221
Query: 456 HQCY---QLTDKSDVYSFGVVLIELISSMPAV-DMNRHRHEINLANLAINKIQKCAFDE- 510
Q K DV+S G+ IEL P + +MN ++A +Q + E
Sbjct: 222 ILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEY 281
Query: 511 ---LIDPCL 516
+D CL
Sbjct: 282 FRNFVDSCL 290
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 136/296 (45%), Gaps = 41/296 (13%)
Query: 280 ATNDFSREKELGDGGFGTVY----YGKLKDGRE--VAVKRLYDN-NYRRVEQFMNEVEIL 332
A + +ELG G FG VY G +KD E VA+K + + + R +F+NE ++
Sbjct: 10 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 69
Query: 333 TRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAK---HGLLTWPI---RM 386
++V L G S+ Q L++ E + G + L R + + +L P +
Sbjct: 70 KEFNCHHVVRLLGVVSQ-GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 128
Query: 387 NIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQG 446
+A E A +AYL+A+ +HRD+ N + +F VK+ DFG++R D+ +G
Sbjct: 129 QMAGEIADGMAYLNANKFVHRDLAARNCXVAEDFTVKIGDFGMTR----DIYETDYYRKG 184
Query: 447 TPG-----YVDPEYHQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHRHEINLANLAIN 501
G ++ PE + T SDV+SFGVVL E +A LA
Sbjct: 185 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWE------------------IATLAEQ 226
Query: 502 KIQKCAFDELIDPCLGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLAELQ 557
Q + ++++ + ++ + EL +C Q N ++RPS E+++ ++
Sbjct: 227 PYQGLSNEQVLRFVMEGGLLDKPDNCPDMLLELMRMCWQYNPKMRPSFLEIISSIK 282
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 129/284 (45%), Gaps = 24/284 (8%)
Query: 288 KELGDGGFGTVY---YGKLKDG--REVAVKRL-YDNNYRRVEQFMNEVEILTRLRHKNLV 341
++LG+G FG V Y DG VAVK L D + + E++IL L H++++
Sbjct: 37 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHII 96
Query: 342 SLFGC-TSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
GC + L LV E+V G++ D L R GL + A + +AYLH
Sbjct: 97 KYKGCCEDAGAASLQLVMEYVPLGSLRDYL--PRHSIGLAQL---LLFAQQICEGMAYLH 151
Query: 401 ASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPG--YVDPEYHQC 458
A IHRD+ N+LLD++ VK+ DFGL++ P G + PE +
Sbjct: 152 AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKE 211
Query: 459 YQLTDKSDVYSFGVVLIELISSMPAVDMNRHRHEINLANLAINKIQKCAFDELIDPCLGF 518
Y+ SDV+SFGV L EL++ + + + L +A ++ EL+
Sbjct: 212 YKFYYASDVWSFGVTLYELLTHCDSSQSPPTKF-LELIGIAQGQMTVLRLTELL------ 264
Query: 519 ESDEEVKRMTTSVAELAFL---CLQQNKELRPSMEEVLAELQRI 559
E E + R AE+ L C + RP+ E ++ L+ +
Sbjct: 265 ERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTV 308
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 109/231 (47%), Gaps = 33/231 (14%)
Query: 271 IFSYSDLAEATNDFSREKELGDGGFGTVYYGKLKDGREVAV-KRLYDNNYRRVEQFMNEV 329
IF SDL + LG G FG ++ EV V K L + F+ EV
Sbjct: 6 IFRPSDLIHG-------EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEV 58
Query: 330 EILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIA 389
+++ L H N++ G + + L + E++ GT+ + +++ W R++ A
Sbjct: 59 KVMRCLEHPNVLKFIGVLYK-DKRLNFITEYIKGGTLRGIIKSMDSQY---PWSQRVSFA 114
Query: 390 IETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQ---- 445
+ AS +AYLH+ +IIHRD+ ++N L+ N V VADFGL+RL + T P+
Sbjct: 115 KDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARL----MVDEKTQPEGLRS 170
Query: 446 -------------GTPGYVDPEYHQCYQLTDKSDVYSFGVVLIELISSMPA 483
G P ++ PE +K DV+SFG+VL E+I + A
Sbjct: 171 LKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNA 221
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 108/212 (50%), Gaps = 17/212 (8%)
Query: 287 EKELGDGGFGTVYYGKLK--DGRE--VAVKRL---YDNNYRRVEQFMNEVEILTRLRHKN 339
EK +G G FG V G+LK RE VA+K L Y + RR F++E I+ + H N
Sbjct: 19 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRR--DFLSEASIMGQFDHPN 76
Query: 340 LVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYL 399
++ L G ++ + ++++ E++ NG++ L R G T + + S + YL
Sbjct: 77 IIHLEGVVTK-CKPVMIITEYMENGSLDAFL---RKNDGRFTVIQLVGMLRGIGSGMKYL 132
Query: 400 HASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGT--PGYVDPEYHQ 457
+HRD+ NIL++SN KV+DFG+SR+ D T G + PE
Sbjct: 133 SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA 192
Query: 458 CYQLTDKSDVYSFGVVLIELIS--SMPAVDMN 487
+ T SDV+S+G+V+ E++S P DM+
Sbjct: 193 YRKFTSASDVWSYGIVMWEVMSYGERPYWDMS 224
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 108/212 (50%), Gaps = 17/212 (8%)
Query: 287 EKELGDGGFGTVYYGKLK--DGRE--VAVKRL---YDNNYRRVEQFMNEVEILTRLRHKN 339
EK +G G FG V G+LK RE VA+K L Y + RR F++E I+ + H N
Sbjct: 13 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRR--DFLSEASIMGQFDHPN 70
Query: 340 LVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYL 399
++ L G ++ + ++++ E++ NG++ L R G T + + S + YL
Sbjct: 71 IIHLEGVVTK-CKPVMIITEYMENGSLDAFL---RKNDGRFTVIQLVGMLRGIGSGMKYL 126
Query: 400 HASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGT--PGYVDPEYHQ 457
+HRD+ NIL++SN KV+DFG+SR+ D T G + PE
Sbjct: 127 SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA 186
Query: 458 CYQLTDKSDVYSFGVVLIELIS--SMPAVDMN 487
+ T SDV+S+G+V+ E++S P DM+
Sbjct: 187 YRKFTSASDVWSYGIVMWEVMSYGERPYWDMS 218
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 119/249 (47%), Gaps = 30/249 (12%)
Query: 284 FSREKELGDGGFGTVYYGK-LKDGREVAVKRLYDNNYRRVEQF---MNEVEILTRLRHKN 339
FS +E+G G FG VY+ + +++ VA+K++ + + E++ + EV L +LRH N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 340 LVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIR-MNIAIETASAL-- 396
+ GC R LV E+ G+ +D L + P++ + IA T AL
Sbjct: 77 TIQYRGCYLR-EHTAWLVMEYCL-GSASDLLEVHKK-------PLQEVEIAAVTHGALQG 127
Query: 397 -AYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEY 455
AYLH+ ++IHRDVK NILL VK+ DFG + + V GTP ++ PE
Sbjct: 128 LAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV-----GTPYWMAPEV 182
Query: 456 HQCY---QLTDKSDVYSFGVVLIELISSMPAV-DMNRHRHEINLANLAINKIQKCAFDE- 510
Q K DV+S G+ IEL P + +MN ++A +Q + E
Sbjct: 183 ILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEY 242
Query: 511 ---LIDPCL 516
+D CL
Sbjct: 243 FRNFVDSCL 251
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 104/213 (48%), Gaps = 12/213 (5%)
Query: 275 SDLAEATNDFSREKELGDGGFGTVYYGK-LKDGREVAVKRLYDN--NYRRVEQFMNEVEI 331
SD ++ K +G G F V + + GREVA+K + N +++ EV I
Sbjct: 5 SDEQPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRI 64
Query: 332 LTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIE 391
+ L H N+V LF + L L+ E+ + G V D L HG + + +
Sbjct: 65 MKILNHPNIVKLFEVIET-EKTLYLIMEYASGGEVFDYL----VAHGRMKEKEARSKFRQ 119
Query: 392 TASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYV 451
SA+ Y H I+HRD+K N+LLD++ +K+ADFG S F + + G+P Y
Sbjct: 120 IVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFC--GSPPYA 177
Query: 452 DPEYHQCYQLTD-KSDVYSFGVVLIELIS-SMP 482
PE Q + + DV+S GV+L L+S S+P
Sbjct: 178 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 210
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 107/225 (47%), Gaps = 24/225 (10%)
Query: 273 SYSDLAEATNDFSREKE---------LGDGGFGTVYYGKLK--DGREV-----AVKRLYD 316
+Y + A F+RE E +G G G V YG+L+ R+V A+K Y
Sbjct: 31 TYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYT 90
Query: 317 NNYRRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAK 376
RR F++E I+ + H N++ L G +R + ++V E++ NG++ L R
Sbjct: 91 ERQRR--DFLSEASIMGQFDHPNIIRLEGVVTR-GRLAMIVTEYMENGSLDTFL---RTH 144
Query: 377 HGLLTWPIRMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLD 436
G T + + + + YL +HRD+ N+L+DSN KV+DFGLSR+ D
Sbjct: 145 DGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDD 204
Query: 437 VTHVSTAPQGT--PGYVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
T G + PE + SDV+SFGVV+ E+++
Sbjct: 205 PDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 98/200 (49%), Gaps = 12/200 (6%)
Query: 288 KELGDGGFGTVYYGK-LKDGREVAVKRLYDN--NYRRVEQFMNEVEILTRLRHKNLVSLF 344
K +G G F V + + G+EVAVK + N +++ EV I+ L H N+V LF
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 345 GCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDI 404
+ L LV E+ + G V D L HG + + SA+ Y H I
Sbjct: 80 EVIET-EKTLYLVMEYASGGEVFDYL----VAHGRMKEKEARAKFRQIVSAVQYCHQKFI 134
Query: 405 IHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQLTD- 463
+HRD+K N+LLD++ +K+ADFG S F + A G P Y PE Q +
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSNEFTFG--NKLDAFCGAPPYAAPELFQGKKYDGP 192
Query: 464 KSDVYSFGVVLIELIS-SMP 482
+ DV+S GV+L L+S S+P
Sbjct: 193 EVDVWSLGVILYTLVSGSLP 212
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 108/214 (50%), Gaps = 14/214 (6%)
Query: 273 SYSDLAEATNDFSREKELGDGGFGTVYYG-KLKDGREVAVKRLYDNNYRRVEQFMNEVEI 331
S + + ++R +++G G GTVY + G+EVA++++ + E +NE+ +
Sbjct: 11 SIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILV 70
Query: 332 LTRLRHKNLVSLFGCTSRYSQG--LLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIA 389
+ ++ N+V+ Y G L +V E++A G++ D + G + R
Sbjct: 71 MRENKNPNIVNYL---DSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR---- 123
Query: 390 IETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGL-SRLFPLDVTHVSTAPQGTP 448
E AL +LH++ +IHRD+K++NILL + VK+ DFG +++ P GTP
Sbjct: 124 -ECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMV--GTP 180
Query: 449 GYVDPEYHQCYQLTDKSDVYSFGVVLIELISSMP 482
++ PE K D++S G++ IE+I P
Sbjct: 181 YWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEP 214
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 137/298 (45%), Gaps = 30/298 (10%)
Query: 270 PIFSYSDLAEATNDFSREKELGDGGFGTVYYGK-LKDGREVAVKR-----LYDNNYRRVE 323
P Y+ LA +F EK++G G F VY L DG VA+K+ L D R
Sbjct: 24 PDMGYNTLA----NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKAR--A 77
Query: 324 QFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWP 383
+ E+++L +L H N++ + ++ L +V E G ++ + + + L+
Sbjct: 78 DCIKEIDLLKQLNHPNVIKYYASFIEDNE-LNIVLELADAGDLSRMIKHFKKQKRLIPER 136
Query: 384 IRMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTA 443
++ SAL ++H+ ++HRD+K N+ + + VK+ D GL R F T +
Sbjct: 137 TVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSL 196
Query: 444 PQGTPGYVDPEYHQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHRHEINLANLAINKI 503
GTP Y+ PE KSD++S G +L E M A+ + ++NL +L KI
Sbjct: 197 -VGTPYYMSPERIHENGYNFKSDIWSLGCLLYE----MAALQSPFYGDKMNLYSLC-KKI 250
Query: 504 QKCAFDELIDPCLGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLAELQRIKS 561
++C + P EE++++ +C+ + E RP + V +R+ +
Sbjct: 251 EQCDY----PPLPSDHYSEELRQLVN-------MCINPDPEKRPDVTYVYDVAKRMHA 297
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 108/214 (50%), Gaps = 14/214 (6%)
Query: 273 SYSDLAEATNDFSREKELGDGGFGTVYYG-KLKDGREVAVKRLYDNNYRRVEQFMNEVEI 331
S + + ++R +++G G GTVY + G+EVA++++ + E +NE+ +
Sbjct: 11 SIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILV 70
Query: 332 LTRLRHKNLVSLFGCTSRYSQG--LLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIA 389
+ ++ N+V+ Y G L +V E++A G++ D + G + R
Sbjct: 71 MRENKNPNIVNYL---DSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR---- 123
Query: 390 IETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGL-SRLFPLDVTHVSTAPQGTP 448
E AL +LH++ +IHRD+K++NILL + VK+ DFG +++ P GTP
Sbjct: 124 -ECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV--GTP 180
Query: 449 GYVDPEYHQCYQLTDKSDVYSFGVVLIELISSMP 482
++ PE K D++S G++ IE+I P
Sbjct: 181 YWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEP 214
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 102/201 (50%), Gaps = 15/201 (7%)
Query: 289 ELGDGGFGTV---YYGKLKD--GREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSL 343
+LG G FG+V Y L D G VAVK+L + + F E++IL L +V
Sbjct: 14 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 73
Query: 344 FGCTSRYSQG---LLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
G + Y G L LV E++ +G + D L RA+ L + + + + YL
Sbjct: 74 RGVS--YGPGRPELRLVMEYLPSGCLRDFLQRHRAR---LDASRLLLYSSQICKGMEYLG 128
Query: 401 ASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDV-THVSTAPQGTP-GYVDPEYHQC 458
+ +HRD+ NIL++S VK+ADFGL++L PLD V P +P + PE
Sbjct: 129 SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSD 188
Query: 459 YQLTDKSDVYSFGVVLIELIS 479
+ +SDV+SFGVVL EL +
Sbjct: 189 NIFSRQSDVWSFGVVLYELFT 209
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 108/214 (50%), Gaps = 14/214 (6%)
Query: 273 SYSDLAEATNDFSREKELGDGGFGTVYYG-KLKDGREVAVKRLYDNNYRRVEQFMNEVEI 331
S + + ++R +++G G GTVY + G+EVA++++ + E +NE+ +
Sbjct: 12 SIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILV 71
Query: 332 LTRLRHKNLVSLFGCTSRYSQG--LLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIA 389
+ ++ N+V+ Y G L +V E++A G++ D + G + R
Sbjct: 72 MRENKNPNIVNYL---DSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR---- 124
Query: 390 IETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGL-SRLFPLDVTHVSTAPQGTP 448
E AL +LH++ +IHRD+K++NILL + VK+ DFG +++ P GTP
Sbjct: 125 -ECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV--GTP 181
Query: 449 GYVDPEYHQCYQLTDKSDVYSFGVVLIELISSMP 482
++ PE K D++S G++ IE+I P
Sbjct: 182 YWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEP 215
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 105/202 (51%), Gaps = 12/202 (5%)
Query: 284 FSREKELGDGGFGTVYYG-KLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVS 342
++R +++G G GTVY + G+EVA++++ + E +NE+ ++ ++ N+V+
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 82
Query: 343 LFGCTSRYSQG--LLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
Y G L +V E++A G++ D + G + R E AL +LH
Sbjct: 83 YL---DSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR-----ECLQALEFLH 134
Query: 401 ASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQ 460
++ +IHR++K++NILL + VK+ DFG + + ST GTP ++ PE
Sbjct: 135 SNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM-VGTPYWMAPEVVTRKA 193
Query: 461 LTDKSDVYSFGVVLIELISSMP 482
K D++S G++ IE+I P
Sbjct: 194 YGPKVDIWSLGIMAIEMIEGEP 215
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 130/284 (45%), Gaps = 24/284 (8%)
Query: 288 KELGDGGFGTVY---YGKLKDG--REVAVKRL-YDNNYRRVEQFMNEVEILTRLRHKNLV 341
++LG+G FG V Y DG VAVK L D + + E++IL L H++++
Sbjct: 20 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHII 79
Query: 342 SLFGC-TSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
GC + + L LV E+V G++ D L R GL + A + +AYLH
Sbjct: 80 KYKGCCEDQGEKSLQLVMEYVPLGSLRDYL--PRHSIGLAQL---LLFAQQICEGMAYLH 134
Query: 401 ASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPG--YVDPEYHQC 458
A IHR++ N+LLD++ VK+ DFGL++ P + G + PE +
Sbjct: 135 AQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKE 194
Query: 459 YQLTDKSDVYSFGVVLIELISSMPAVDMNRHRHEINLANLAINKIQKCAFDELIDPCLGF 518
Y+ SDV+SFGV L EL++ + + + L +A ++ EL+
Sbjct: 195 YKFYYASDVWSFGVTLYELLTHCDSSQSPPTKF-LELIGIAQGQMTVLRLTELL------ 247
Query: 519 ESDEEVKRMTTSVAELAFL---CLQQNKELRPSMEEVLAELQRI 559
E E + R E+ L C + RP+ E ++ L+ +
Sbjct: 248 ERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTV 291
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 99/201 (49%), Gaps = 14/201 (6%)
Query: 288 KELGDGGFGTVYYGK-LKDGREVAVKRLYDN---NYRRVEQFMNEVEILTRLRHKNLVSL 343
K +G G F V + + G+EVAV R+ D N +++ EV I+ L H N+V L
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAV-RIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 78
Query: 344 FGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASD 403
F + L LV E+ + G V D L HG + + SA+ Y H
Sbjct: 79 FEVIET-EKTLYLVMEYASGGEVFDYL----VAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 404 IIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQLTD 463
I+HRD+K N+LLD++ +K+ADFG S F + G+P Y PE Q +
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC--GSPPYAAPELFQGKKYDG 191
Query: 464 -KSDVYSFGVVLIELIS-SMP 482
+ DV+S GV+L L+S S+P
Sbjct: 192 PEVDVWSLGVILYTLVSGSLP 212
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 98/200 (49%), Gaps = 12/200 (6%)
Query: 288 KELGDGGFGTVYYGK-LKDGREVAVKRLYDN--NYRRVEQFMNEVEILTRLRHKNLVSLF 344
K +G G F V + + G+EVAVK + N +++ EV I+ L H N+V LF
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 345 GCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDI 404
+ L LV E+ + G V D L HG + + SA+ Y H I
Sbjct: 80 EVIET-EKTLYLVMEYASGGEVFDYL----VAHGRMKEKEARAKFRQIVSAVQYCHQKFI 134
Query: 405 IHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQLTD- 463
+HRD+K N+LLD++ +K+ADFG S F + G+P Y PE Q +
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC--GSPPYAAPELFQGKKYDGP 192
Query: 464 KSDVYSFGVVLIELIS-SMP 482
+ DV+S GV+L L+S S+P
Sbjct: 193 EVDVWSLGVILYTLVSGSLP 212
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 98/200 (49%), Gaps = 12/200 (6%)
Query: 288 KELGDGGFGTVYYGK-LKDGREVAVKRLYDN--NYRRVEQFMNEVEILTRLRHKNLVSLF 344
K +G G F V + + G+EVAVK + N +++ EV I+ L H N+V LF
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 345 GCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDI 404
+ L LV E+ + G V D L HG + + SA+ Y H I
Sbjct: 80 EVIET-EKTLYLVMEYASGGEVFDYL----VAHGRMKEKEARAKFRQIVSAVQYCHQKFI 134
Query: 405 IHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQLTD- 463
+HRD+K N+LLD++ +K+ADFG S F + G+P Y PE Q +
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC--GSPPYAAPELFQGKKYDGP 192
Query: 464 KSDVYSFGVVLIELIS-SMP 482
+ DV+S GV+L L+S S+P
Sbjct: 193 EVDVWSLGVILYTLVSGSLP 212
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 101/203 (49%), Gaps = 18/203 (8%)
Query: 288 KELGDGGFGTVYYGK-LKDGREVAVKRLYDN---NYRRVEQFMNEVEILTRLRHKNLVSL 343
K +G G F V + + G+EVAV R+ D N +++ EV I+ L H N+V L
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAV-RIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 78
Query: 344 FGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASD 403
F + L LV E+ + G V D L HG + + SA+ Y H
Sbjct: 79 FEVIET-EKTLYLVMEYASGGEVFDYL----VAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 404 IIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQ--GTPGYVDPEYHQCYQL 461
I+HRD+K N+LLD++ +K+ADFG S F T + + G+P Y PE Q +
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEF----TFGNKLDEFCGSPPYAAPELFQGKKY 189
Query: 462 TD-KSDVYSFGVVLIELIS-SMP 482
+ DV+S GV+L L+S S+P
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLP 212
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 98/200 (49%), Gaps = 12/200 (6%)
Query: 288 KELGDGGFGTVYYGK-LKDGREVAVKRLYDN--NYRRVEQFMNEVEILTRLRHKNLVSLF 344
K +G G F V + + G+EVAVK + N +++ EV I+ L H N+V LF
Sbjct: 13 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 72
Query: 345 GCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDI 404
+ L LV E+ + G V D L HG + + SA+ Y H I
Sbjct: 73 EVIET-EKTLYLVMEYASGGEVFDYL----VAHGWMKEKEARAKFRQIVSAVQYCHQKFI 127
Query: 405 IHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQLTD- 463
+HRD+K N+LLD++ +K+ADFG S F + G+P Y PE Q +
Sbjct: 128 VHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC--GSPPYAAPELFQGKKYDGP 185
Query: 464 KSDVYSFGVVLIELIS-SMP 482
+ DV+S GV+L L+S S+P
Sbjct: 186 EVDVWSLGVILYTLVSGSLP 205
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 132/292 (45%), Gaps = 36/292 (12%)
Query: 275 SDLAEATNDFSREKELGDGGFGTVYYGK-LKDGREVAVKRLYDNNYRRVEQFMNEVEILT 333
S L + F + +G+G +G VY G+ +K G+ A+K + D E+ E+ +L
Sbjct: 17 SALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIK-VMDVTGDEEEEIKQEINMLK 75
Query: 334 RL-RHKNLVSLFGCTSR-----YSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMN 387
+ H+N+ + +G + L LV EF G+V D + + W
Sbjct: 76 KYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWI--AY 133
Query: 388 IAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGT 447
I E L++LH +IHRD+K N+LL N VK+ DFG+S V +T GT
Sbjct: 134 ICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFI-GT 192
Query: 448 PGYVDPEYHQCYQLTD-----KSDVYSFGVVLIELISSMPAV-DMNRHRHEINLANLAIN 501
P ++ PE C + D KSD++S G+ IE+ P + DM+ R A+
Sbjct: 193 PYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR--------ALF 244
Query: 502 KIQKCAFDELIDPCLGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVL 553
I + +P +S + K+ + + CL +N RP+ E+++
Sbjct: 245 LIPR-------NPAPRLKSKKWSKKFQSFIES----CLVKNHSQRPATEQLM 285
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 98/195 (50%), Gaps = 8/195 (4%)
Query: 289 ELGDGGFGTVYYGKLK-DGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCT 347
++G+G G V + K GR+VAVK + +R E NEV I+ +H N+V ++ +
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYK-S 110
Query: 348 SRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDIIHR 407
+ L ++ EF+ G + D + R + + ALAYLHA +IHR
Sbjct: 111 YLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIA-----TVCEAVLQALAYLHAQGVIHR 165
Query: 408 DVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQLTDKSDV 467
D+K+++ILL + VK++DFG DV GTP ++ PE + D+
Sbjct: 166 DIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLV-GTPYWMAPEVISRSLYATEVDI 224
Query: 468 YSFGVVLIELISSMP 482
+S G+++IE++ P
Sbjct: 225 WSLGIMVIEMVDGEP 239
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 104/205 (50%), Gaps = 12/205 (5%)
Query: 284 FSREKELGDGGFGTV---YYGKLKD--GREVAVKRLY-DNNYRRVEQFMNEVEILTRLRH 337
R ++LG+G FG V Y D G +VAVK L ++ + E+EIL L H
Sbjct: 23 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYH 82
Query: 338 KNLVSLFG-CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASAL 396
+N+V G CT G+ L+ EF+ +G++ + L ++ K L ++ A++ +
Sbjct: 83 ENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQ---QLKYAVQICKGM 139
Query: 397 AYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTA-PQGTPG-YVDPE 454
YL + +HRD+ N+L++S VK+ DFGL++ D + + +P + PE
Sbjct: 140 DYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPE 199
Query: 455 YHQCYQLTDKSDVYSFGVVLIELIS 479
+ SDV+SFGV L EL++
Sbjct: 200 CLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 130/284 (45%), Gaps = 24/284 (8%)
Query: 288 KELGDGGFGTVY---YGKLKDG--REVAVKRL-YDNNYRRVEQFMNEVEILTRLRHKNLV 341
++LG+G FG V Y DG VAVK L D + + E++IL L H++++
Sbjct: 20 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHII 79
Query: 342 SLFGC-TSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
GC + + L LV E+V G++ D L R GL + A + +AYLH
Sbjct: 80 KYKGCCEDQGEKSLQLVMEYVPLGSLRDYL--PRHSIGLAQL---LLFAQQICEGMAYLH 134
Query: 401 ASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPG--YVDPEYHQC 458
+ IHR++ N+LLD++ VK+ DFGL++ P + G + PE +
Sbjct: 135 SQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKE 194
Query: 459 YQLTDKSDVYSFGVVLIELISSMPAVDMNRHRHEINLANLAINKIQKCAFDELIDPCLGF 518
Y+ SDV+SFGV L EL++ + + + L +A ++ EL+
Sbjct: 195 YKFYYASDVWSFGVTLYELLTHCDSSQSPPTKF-LELIGIAQGQMTVLRLTELL------ 247
Query: 519 ESDEEVKRMTTSVAELAFL---CLQQNKELRPSMEEVLAELQRI 559
E E + R E+ L C + RP+ E ++ L+ +
Sbjct: 248 ERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTV 291
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 104/205 (50%), Gaps = 12/205 (5%)
Query: 284 FSREKELGDGGFGTV---YYGKLKD--GREVAVKRLY-DNNYRRVEQFMNEVEILTRLRH 337
R ++LG+G FG V Y D G +VAVK L ++ + E+EIL L H
Sbjct: 11 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYH 70
Query: 338 KNLVSLFG-CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASAL 396
+N+V G CT G+ L+ EF+ +G++ + L ++ K L ++ A++ +
Sbjct: 71 ENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQ---QLKYAVQICKGM 127
Query: 397 AYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTA-PQGTPG-YVDPE 454
YL + +HRD+ N+L++S VK+ DFGL++ D + + +P + PE
Sbjct: 128 DYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPE 187
Query: 455 YHQCYQLTDKSDVYSFGVVLIELIS 479
+ SDV+SFGV L EL++
Sbjct: 188 CLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 100/216 (46%), Gaps = 20/216 (9%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKDGREV-AVKRLYDNNYRR--VE-QFMNEVEILTRLRH 337
+DF + LG G FG VY + K + + A+K L+ + + VE Q E+EI + LRH
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
N++ ++ + + L+ EF G + +L KHG E A AL
Sbjct: 75 PNILRMYNYFHDRKR-IYLMLEFAPRGELYKELQ----KHGRFDEQRSATFMEELADALH 129
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQ----GTPGYVDP 453
Y H +IHRD+K N+L+ +K+ADFG S H + + GT Y+ P
Sbjct: 130 YCHERKVIHRDIKPENLLMGYKGELKIADFGWS-------VHAPSLRRRXMCGTLDYLPP 182
Query: 454 EYHQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRH 489
E + +K D++ GV+ E + MP D H
Sbjct: 183 EMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSH 218
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 99/197 (50%), Gaps = 12/197 (6%)
Query: 289 ELGDGGFGTVYYGKLKD-GREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCT 347
++G+G G V K G++VAVK++ +R E NEV I+ H N+V ++
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMY--- 108
Query: 348 SRYSQG--LLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDII 405
S Y G L +V EF+ G + D + R + + + AL+YLH +I
Sbjct: 109 SSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----TVCLSVLRALSYLHNQGVI 163
Query: 406 HRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQLTDKS 465
HRD+K+++ILL S+ +K++DFG +V GTP ++ PE +
Sbjct: 164 HRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXL-VGTPYWMAPEVISRLPYGTEV 222
Query: 466 DVYSFGVVLIELISSMP 482
D++S G+++IE+I P
Sbjct: 223 DIWSLGIMVIEMIDGEP 239
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 100/216 (46%), Gaps = 20/216 (9%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKDGREV-AVKRLYDNNYRR--VE-QFMNEVEILTRLRH 337
+DF + LG G FG VY + K + + A+K L+ + + VE Q E+EI + LRH
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
N++ ++ + + L+ EF G + +L KHG E A AL
Sbjct: 74 PNILRMYNYFHDRKR-IYLMLEFAPRGELYKELQ----KHGRFDEQRSATFMEELADALH 128
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQ----GTPGYVDP 453
Y H +IHRD+K N+L+ +K+ADFG S H + + GT Y+ P
Sbjct: 129 YCHERKVIHRDIKPENLLMGYKGELKIADFGWS-------VHAPSLRRRXMCGTLDYLPP 181
Query: 454 EYHQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRH 489
E + +K D++ GV+ E + MP D H
Sbjct: 182 EMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSH 217
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 101/209 (48%), Gaps = 20/209 (9%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKDGRE-----VAVKRLYDNNYRRVE-QFMNEVEILTRL 335
+ R K LG G FGTVY G E VA+K L + + +FM+E I+ +
Sbjct: 38 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASM 97
Query: 336 RHKNLVSLFG-CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHG---LLTWPIRMNIAIE 391
H +LV L G C S Q LV + + +G + + +H + G LL W ++
Sbjct: 98 DHPHLVRLLGVCLSPTIQ---LVTQLMPHGCLLEYVHEHKDNIGSQLLLNW------CVQ 148
Query: 392 TASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP-GY 450
A + YL ++HRD+ N+L+ S VK+ DFGL+RL D + P +
Sbjct: 149 IAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKW 208
Query: 451 VDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
+ E + T +SDV+S+GV + EL++
Sbjct: 209 MALECIHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 99/202 (49%), Gaps = 16/202 (7%)
Query: 288 KELGDGGFGTVYYGK-LKDGREVAVKRLYDN--NYRRVEQFMNEVEILTRLRHKNLVSLF 344
K +G G F V + + G+EVAVK + N +++ EV I L H N+V LF
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLF 79
Query: 345 GCTSRYSQGLLLVYEFVANGTVADQL--HGDRAKHGLLTWPIRMNIAIETASALAYLHAS 402
+ L LV E+ + G V D L HG R K R + SA+ Y H
Sbjct: 80 EVIET-EKTLYLVXEYASGGEVFDYLVAHG-RXKEKEARAKFR-----QIVSAVQYCHQK 132
Query: 403 DIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQLT 462
I+HRD+K N+LLD++ +K+ADFG S F + A G P Y PE Q +
Sbjct: 133 FIVHRDLKAENLLLDADXNIKIADFGFSNEFTFG--NKLDAFCGAPPYAAPELFQGKKYD 190
Query: 463 D-KSDVYSFGVVLIELIS-SMP 482
+ DV+S GV+L L+S S+P
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLP 212
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 100/218 (45%), Gaps = 20/218 (9%)
Query: 280 ATNDFSREKELGDGGFGTVYYGKLKDGREV-AVKRLYDNNYRR--VE-QFMNEVEILTRL 335
+DF + LG G FG VY + K + + A+K L+ + + VE Q E+EI + L
Sbjct: 12 TIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL 71
Query: 336 RHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASA 395
RH N++ ++ + + L+ EF G + +L KHG E A A
Sbjct: 72 RHPNILRMYNYFHDRKR-IYLMLEFAPRGELYKELQ----KHGRFDEQRSATFMEELADA 126
Query: 396 LAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQ----GTPGYV 451
L Y H +IHRD+K N+L+ +K+ADFG S H + + GT Y+
Sbjct: 127 LHYCHERKVIHRDIKPENLLMGYKGELKIADFGWS-------VHAPSLRRRXMCGTLDYL 179
Query: 452 DPEYHQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRH 489
PE + +K D++ GV+ E + MP D H
Sbjct: 180 PPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSH 217
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 101/209 (48%), Gaps = 20/209 (9%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKDGRE-----VAVKRLYDNNYRRVE-QFMNEVEILTRL 335
+ R K LG G FGTVY G E VA+K L + + +FM+E I+ +
Sbjct: 15 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASM 74
Query: 336 RHKNLVSLFG-CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHG---LLTWPIRMNIAIE 391
H +LV L G C S Q LV + + +G + + +H + G LL W ++
Sbjct: 75 DHPHLVRLLGVCLSPTIQ---LVTQLMPHGCLLEYVHEHKDNIGSQLLLNW------CVQ 125
Query: 392 TASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP-GY 450
A + YL ++HRD+ N+L+ S VK+ DFGL+RL D + P +
Sbjct: 126 IAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKW 185
Query: 451 VDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
+ E + T +SDV+S+GV + EL++
Sbjct: 186 MALECIHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 102/201 (50%), Gaps = 20/201 (9%)
Query: 289 ELGDGGFGTVYYGKLKD-GREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCT 347
++G+G G V ++ G+ VAVK++ +R E NEV I+ +H+N+V ++
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNS- 216
Query: 348 SRYSQG--LLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDII 405
Y G L +V EF+ G + D + R + + + AL+ LHA +I
Sbjct: 217 --YLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLHAQGVI 269
Query: 406 HRDVKTNNILLDSNFCVKVADFG----LSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQL 461
HRD+K+++ILL + VK++DFG +S+ P V GTP ++ PE
Sbjct: 270 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-----GTPYWMAPELISRLPY 324
Query: 462 TDKSDVYSFGVVLIELISSMP 482
+ D++S G+++IE++ P
Sbjct: 325 GPEVDIWSLGIMVIEMVDGEP 345
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 101/202 (50%), Gaps = 13/202 (6%)
Query: 290 LGDGGFGTVYYGK-LKDGREVAVKRLYDNNYRRVE---QFMNEVEILTRLRHKNLVSLFG 345
LG GG V+ + L+D R+VAVK L + R +F E + L H +V+++
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 346 C-TSRYSQGLL--LVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHAS 402
+ G L +V E+V T+ D +H + G +T + + + AL + H +
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIADACQALNFSHQN 135
Query: 403 DIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHV--STAPQGTPGYVDPEYHQCYQ 460
IIHRDVK NIL+ + VKV DFG++R V + A GT Y+ PE +
Sbjct: 136 GIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDS 195
Query: 461 LTDKSDVYSFGVVLIELISSMP 482
+ +SDVYS G VL E+++ P
Sbjct: 196 VDARSDVYSLGCVLYEVLTGEP 217
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 110/241 (45%), Gaps = 18/241 (7%)
Query: 282 NDFSREKELGDGGFGTVYYGKLK--DGR--EVAVKRLYDNNYRRVE---QFMNEVEILTR 334
D ++LGDG FG V G+ G+ VAVK L + + E F+ EV +
Sbjct: 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 77
Query: 335 LRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETAS 394
L H+NL+ L+G + + +V E G++ D+L R G A++ A
Sbjct: 78 LDHRNLIRLYGVV--LTPPMKMVTELAPLGSLLDRL---RKHQGHFLLGTLSRYAVQVAE 132
Query: 395 ALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTH-VSTAPQGTP-GYVD 452
+ YL + IHRD+ N+LL + VK+ DFGL R P + H V + P +
Sbjct: 133 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCA 192
Query: 453 PEYHQCYQLTDKSDVYSFGVVLIELIS--SMPAVDMNRHR--HEINLANLAINKIQKCAF 508
PE + + SD + FGV L E+ + P + +N + H+I+ + + + C
Sbjct: 193 PESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQ 252
Query: 509 D 509
D
Sbjct: 253 D 253
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 110/241 (45%), Gaps = 18/241 (7%)
Query: 282 NDFSREKELGDGGFGTVYYGKLK--DGR--EVAVKRLYDNNYRRVE---QFMNEVEILTR 334
D ++LGDG FG V G+ G+ VAVK L + + E F+ EV +
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 335 LRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETAS 394
L H+NL+ L+G + + +V E G++ D+L R G A++ A
Sbjct: 68 LDHRNLIRLYGVV--LTPPMKMVTELAPLGSLLDRL---RKHQGHFLLGTLSRYAVQVAE 122
Query: 395 ALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTH-VSTAPQGTP-GYVD 452
+ YL + IHRD+ N+LL + VK+ DFGL R P + H V + P +
Sbjct: 123 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 182
Query: 453 PEYHQCYQLTDKSDVYSFGVVLIELIS--SMPAVDMNRHR--HEINLANLAINKIQKCAF 508
PE + + SD + FGV L E+ + P + +N + H+I+ + + + C
Sbjct: 183 PESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQ 242
Query: 509 D 509
D
Sbjct: 243 D 243
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 110/241 (45%), Gaps = 18/241 (7%)
Query: 282 NDFSREKELGDGGFGTVYYGKLK--DGR--EVAVKRLYDNNYRRVE---QFMNEVEILTR 334
D ++LGDG FG V G+ G+ VAVK L + + E F+ EV +
Sbjct: 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 77
Query: 335 LRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETAS 394
L H+NL+ L+G + + +V E G++ D+L R G A++ A
Sbjct: 78 LDHRNLIRLYGVV--LTPPMKMVTELAPLGSLLDRL---RKHQGHFLLGTLSRYAVQVAE 132
Query: 395 ALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTH-VSTAPQGTP-GYVD 452
+ YL + IHRD+ N+LL + VK+ DFGL R P + H V + P +
Sbjct: 133 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 192
Query: 453 PEYHQCYQLTDKSDVYSFGVVLIELIS--SMPAVDMNRHR--HEINLANLAINKIQKCAF 508
PE + + SD + FGV L E+ + P + +N + H+I+ + + + C
Sbjct: 193 PESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQ 252
Query: 509 D 509
D
Sbjct: 253 D 253
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 110/241 (45%), Gaps = 18/241 (7%)
Query: 282 NDFSREKELGDGGFGTVYYGKLK--DGR--EVAVKRLYDNNYRRVE---QFMNEVEILTR 334
D ++LGDG FG V G+ G+ VAVK L + + E F+ EV +
Sbjct: 12 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 71
Query: 335 LRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETAS 394
L H+NL+ L+G + + +V E G++ D+L R G A++ A
Sbjct: 72 LDHRNLIRLYGVV--LTPPMKMVTELAPLGSLLDRL---RKHQGHFLLGTLSRYAVQVAE 126
Query: 395 ALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTH-VSTAPQGTP-GYVD 452
+ YL + IHRD+ N+LL + VK+ DFGL R P + H V + P +
Sbjct: 127 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 186
Query: 453 PEYHQCYQLTDKSDVYSFGVVLIELIS--SMPAVDMNRHR--HEINLANLAINKIQKCAF 508
PE + + SD + FGV L E+ + P + +N + H+I+ + + + C
Sbjct: 187 PESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQ 246
Query: 509 D 509
D
Sbjct: 247 D 247
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 110/241 (45%), Gaps = 18/241 (7%)
Query: 282 NDFSREKELGDGGFGTVYYGKLK--DGR--EVAVKRLYDNNYRRVE---QFMNEVEILTR 334
D ++LGDG FG V G+ G+ VAVK L + + E F+ EV +
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 335 LRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETAS 394
L H+NL+ L+G + + +V E G++ D+L R G A++ A
Sbjct: 68 LDHRNLIRLYGVV--LTPPMKMVTELAPLGSLLDRL---RKHQGHFLLGTLSRYAVQVAE 122
Query: 395 ALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTH-VSTAPQGTP-GYVD 452
+ YL + IHRD+ N+LL + VK+ DFGL R P + H V + P +
Sbjct: 123 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCA 182
Query: 453 PEYHQCYQLTDKSDVYSFGVVLIELIS--SMPAVDMNRHR--HEINLANLAINKIQKCAF 508
PE + + SD + FGV L E+ + P + +N + H+I+ + + + C
Sbjct: 183 PESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQ 242
Query: 509 D 509
D
Sbjct: 243 D 243
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 99/205 (48%), Gaps = 10/205 (4%)
Query: 280 ATNDFSREKELGDGGFGTVYYGKLKDGR----EVAVKRLY-DNNYRRVEQFMNEVEILTR 334
A D + LG+G FG VY G + + VAVK D E+FM+E I+
Sbjct: 6 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 65
Query: 335 LRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETAS 394
L H ++V L G + ++ E G + L ++ +LT + +++
Sbjct: 66 LDHPHIVKLIGIIE--EEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLY---SLQICK 120
Query: 395 ALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPE 454
A+AYL + + +HRD+ NIL+ S CVK+ DFGLSR + + ++ + ++ PE
Sbjct: 121 AMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPE 180
Query: 455 YHQCYQLTDKSDVYSFGVVLIELIS 479
+ T SDV+ F V + E++S
Sbjct: 181 SINFRRFTTASDVWMFAVCMWEILS 205
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 115/230 (50%), Gaps = 32/230 (13%)
Query: 258 TDLETGTVYFGVPIFSYSDLAEATNDFSREKELGDGGFG-TVYYGKLKDGREVAVKRLYD 316
DL T +YF ++ + R +++G+G FG + +DGR+ +K +
Sbjct: 11 VDLGTENLYF-----------QSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEI-- 57
Query: 317 NNYRRV-----EQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLH 371
N R+ E+ EV +L ++H N+V + + + L +V ++ G + +++
Sbjct: 58 -NISRMSSKEREESRREVAVLANMKHPNIVQ-YRESFEENGSLYIVMDYCEGGDLFKRIN 115
Query: 372 GDRA----KHGLLTWPIRMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADF 427
+ + +L W +++ +A L ++H I+HRD+K+ NI L + V++ DF
Sbjct: 116 AQKGVLFQEDQILDWFVQICLA------LKHVHDRKILHRDIKSQNIFLTKDGTVQLGDF 169
Query: 428 GLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQLTDKSDVYSFGVVLIEL 477
G++R+ V ++ A GTP Y+ PE + +KSD+++ G VL EL
Sbjct: 170 GIARVLNSTV-ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYEL 218
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 99/197 (50%), Gaps = 12/197 (6%)
Query: 289 ELGDGGFGTVYYGKLKD-GREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCT 347
++G+G G V ++ G+ VAVK++ +R E NEV I+ +H+N+V ++
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNS- 94
Query: 348 SRYSQG--LLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDII 405
Y G L +V EF+ G + D + R + + + AL+ LHA +I
Sbjct: 95 --YLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLHAQGVI 147
Query: 406 HRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQLTDKS 465
HRD+K+++ILL + VK++DFG +V GTP ++ PE +
Sbjct: 148 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL-VGTPYWMAPELISRLPYGPEV 206
Query: 466 DVYSFGVVLIELISSMP 482
D++S G+++IE++ P
Sbjct: 207 DIWSLGIMVIEMVDGEP 223
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 110/241 (45%), Gaps = 18/241 (7%)
Query: 282 NDFSREKELGDGGFGTVYYGKLK--DGR--EVAVKRLYDNNYRRVE---QFMNEVEILTR 334
D ++LGDG FG V G+ G+ VAVK L + + E F+ EV +
Sbjct: 12 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 71
Query: 335 LRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETAS 394
L H+NL+ L+G + + +V E G++ D+L R G A++ A
Sbjct: 72 LDHRNLIRLYGVV--LTPPMKMVTELAPLGSLLDRL---RKHQGHFLLGTLSRYAVQVAE 126
Query: 395 ALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTH-VSTAPQGTP-GYVD 452
+ YL + IHRD+ N+LL + VK+ DFGL R P + H V + P +
Sbjct: 127 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 186
Query: 453 PEYHQCYQLTDKSDVYSFGVVLIELIS--SMPAVDMNRHR--HEINLANLAINKIQKCAF 508
PE + + SD + FGV L E+ + P + +N + H+I+ + + + C
Sbjct: 187 PESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQ 246
Query: 509 D 509
D
Sbjct: 247 D 247
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 99/205 (48%), Gaps = 10/205 (4%)
Query: 280 ATNDFSREKELGDGGFGTVYYGKLKDGR----EVAVKRLY-DNNYRRVEQFMNEVEILTR 334
A D + LG+G FG VY G + + VAVK D E+FM+E I+
Sbjct: 22 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 81
Query: 335 LRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETAS 394
L H ++V L G + ++ E G + L ++ +LT + +++
Sbjct: 82 LDHPHIVKLIGIIE--EEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLY---SLQICK 136
Query: 395 ALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPE 454
A+AYL + + +HRD+ NIL+ S CVK+ DFGLSR + + ++ + ++ PE
Sbjct: 137 AMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPE 196
Query: 455 YHQCYQLTDKSDVYSFGVVLIELIS 479
+ T SDV+ F V + E++S
Sbjct: 197 SINFRRFTTASDVWMFAVCMWEILS 221
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 104/202 (51%), Gaps = 9/202 (4%)
Query: 284 FSREKELGDGGFGTVYYGKLKD-GREVAVKRL-YDNNYRRVEQFMNEVEILTRLRHKNLV 341
F +++LG G FG V+ + + G E +K + D + +EQ E+E+L L H N++
Sbjct: 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNII 83
Query: 342 SLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHA 401
+F Y + +V E G + +++ +A+ L+ + + +ALAY H+
Sbjct: 84 KIFEVFEDY-HNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHS 142
Query: 402 SDIIHRDVKTNNILLDS---NFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQC 458
++H+D+K NIL + +K+ DFGL+ LF D ST GT Y+ PE +
Sbjct: 143 QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSD--EHSTNAAGTALYMAPEVFK- 199
Query: 459 YQLTDKSDVYSFGVVLIELISS 480
+T K D++S GVV+ L++
Sbjct: 200 RDVTFKCDIWSAGVVMYFLLTG 221
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 99/197 (50%), Gaps = 12/197 (6%)
Query: 289 ELGDGGFGTVYYGKLKD-GREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCT 347
++G+G G V ++ G+ VAVK++ +R E NEV I+ +H+N+V ++
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNS- 139
Query: 348 SRYSQG--LLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDII 405
Y G L +V EF+ G + D + R + + + AL+ LHA +I
Sbjct: 140 --YLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLHAQGVI 192
Query: 406 HRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQLTDKS 465
HRD+K+++ILL + VK++DFG +V GTP ++ PE +
Sbjct: 193 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL-VGTPYWMAPELISRLPYGPEV 251
Query: 466 DVYSFGVVLIELISSMP 482
D++S G+++IE++ P
Sbjct: 252 DIWSLGIMVIEMVDGEP 268
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 99/197 (50%), Gaps = 12/197 (6%)
Query: 289 ELGDGGFGTVYYGKLKD-GREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCT 347
++G+G G V ++ G+ VAVK++ +R E NEV I+ +H+N+V ++
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNS- 96
Query: 348 SRYSQG--LLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDII 405
Y G L +V EF+ G + D + R + + + AL+ LHA +I
Sbjct: 97 --YLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLHAQGVI 149
Query: 406 HRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQLTDKS 465
HRD+K+++ILL + VK++DFG +V GTP ++ PE +
Sbjct: 150 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL-VGTPYWMAPELISRLPYGPEV 208
Query: 466 DVYSFGVVLIELISSMP 482
D++S G+++IE++ P
Sbjct: 209 DIWSLGIMVIEMVDGEP 225
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 101/202 (50%), Gaps = 13/202 (6%)
Query: 290 LGDGGFGTVYYGK-LKDGREVAVKRLYDNNYRRVE---QFMNEVEILTRLRHKNLVSLFG 345
LG GG V+ + L+D R+VAVK L + R +F E + L H +V+++
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 346 C-TSRYSQGLL--LVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHAS 402
+ G L +V E+V T+ D +H + G +T + + + AL + H +
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIADACQALNFSHQN 135
Query: 403 DIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHV--STAPQGTPGYVDPEYHQCYQ 460
IIHRDVK NI++ + VKV DFG++R V + A GT Y+ PE +
Sbjct: 136 GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDS 195
Query: 461 LTDKSDVYSFGVVLIELISSMP 482
+ +SDVYS G VL E+++ P
Sbjct: 196 VDARSDVYSLGCVLYEVLTGEP 217
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 110/241 (45%), Gaps = 18/241 (7%)
Query: 282 NDFSREKELGDGGFGTVYYGKLK--DGR--EVAVKRLYDNNYRRVE---QFMNEVEILTR 334
D ++LGDG FG V G+ G+ VAVK L + + E F+ EV +
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 335 LRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETAS 394
L H+NL+ L+G + + +V E G++ D+L R G A++ A
Sbjct: 68 LDHRNLIRLYGVV--LTPPMKMVTELAPLGSLLDRL---RKHQGHFLLGTLSRYAVQVAE 122
Query: 395 ALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTH-VSTAPQGTP-GYVD 452
+ YL + IHRD+ N+LL + VK+ DFGL R P + H V + P +
Sbjct: 123 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 182
Query: 453 PEYHQCYQLTDKSDVYSFGVVLIELIS--SMPAVDMNRHR--HEINLANLAINKIQKCAF 508
PE + + SD + FGV L E+ + P + +N + H+I+ + + + C
Sbjct: 183 PESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQ 242
Query: 509 D 509
D
Sbjct: 243 D 243
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 99/205 (48%), Gaps = 10/205 (4%)
Query: 280 ATNDFSREKELGDGGFGTVYYGKLKDGR----EVAVKRLY-DNNYRRVEQFMNEVEILTR 334
A D + LG+G FG VY G + + VAVK D E+FM+E I+
Sbjct: 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 69
Query: 335 LRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETAS 394
L H ++V L G + ++ E G + L ++ +LT + +++
Sbjct: 70 LDHPHIVKLIGIIE--EEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLY---SLQICK 124
Query: 395 ALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPE 454
A+AYL + + +HRD+ NIL+ S CVK+ DFGLSR + + ++ + ++ PE
Sbjct: 125 AMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPE 184
Query: 455 YHQCYQLTDKSDVYSFGVVLIELIS 479
+ T SDV+ F V + E++S
Sbjct: 185 SINFRRFTTASDVWMFAVCMWEILS 209
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 101/202 (50%), Gaps = 13/202 (6%)
Query: 290 LGDGGFGTVYYGK-LKDGREVAVKRLYDNNYRRVE---QFMNEVEILTRLRHKNLVSLFG 345
LG GG V+ + L+D R+VAVK L + R +F E + L H +V+++
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 346 C-TSRYSQGLL--LVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHAS 402
+ G L +V E+V T+ D +H + G +T + + + AL + H +
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIADACQALNFSHQN 135
Query: 403 DIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHV--STAPQGTPGYVDPEYHQCYQ 460
IIHRDVK NI++ + VKV DFG++R V + A GT Y+ PE +
Sbjct: 136 GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDS 195
Query: 461 LTDKSDVYSFGVVLIELISSMP 482
+ +SDVYS G VL E+++ P
Sbjct: 196 VDARSDVYSLGCVLYEVLTGEP 217
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 99/197 (50%), Gaps = 12/197 (6%)
Query: 289 ELGDGGFGTVYYGKLKD-GREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCT 347
++G+G G V ++ G+ VAVK++ +R E NEV I+ +H+N+V ++
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNS- 89
Query: 348 SRYSQG--LLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDII 405
Y G L +V EF+ G + D + R + + + AL+ LHA +I
Sbjct: 90 --YLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLHAQGVI 142
Query: 406 HRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQLTDKS 465
HRD+K+++ILL + VK++DFG +V GTP ++ PE +
Sbjct: 143 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL-VGTPYWMAPELISRLPYGPEV 201
Query: 466 DVYSFGVVLIELISSMP 482
D++S G+++IE++ P
Sbjct: 202 DIWSLGIMVIEMVDGEP 218
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 99/197 (50%), Gaps = 12/197 (6%)
Query: 289 ELGDGGFGTVYYGKLKD-GREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCT 347
++G+G G V ++ G+ VAVK++ +R E NEV I+ +H+N+V ++
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNS- 85
Query: 348 SRYSQG--LLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDII 405
Y G L +V EF+ G + D + R + + + AL+ LHA +I
Sbjct: 86 --YLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLHAQGVI 138
Query: 406 HRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQLTDKS 465
HRD+K+++ILL + VK++DFG +V GTP ++ PE +
Sbjct: 139 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL-VGTPYWMAPELISRLPYGPEV 197
Query: 466 DVYSFGVVLIELISSMP 482
D++S G+++IE++ P
Sbjct: 198 DIWSLGIMVIEMVDGEP 214
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 127/266 (47%), Gaps = 19/266 (7%)
Query: 288 KELGDGGFGTVYYGKLK--DGR--EVAVK--RLYDNNYRRVEQFMNEVEILTRLRHKNLV 341
K LG+G FG+V G LK DG +VAVK +L +++ R +E+F++E + H N++
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 342 SLFG-CTSRYSQGL---LLVYEFVANGTVADQLHGDRAKHGLLTWPIR--MNIAIETASA 395
L G C SQG+ +++ F+ G + L R + G P++ + ++ A
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALG 159
Query: 396 LAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLS-RLFPLDVTHVSTAPQGTPGYVDPE 454
+ YL + +HRD+ N +L + V VADFGLS +++ D + ++ E
Sbjct: 160 MEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIE 219
Query: 455 YHQCYQLTDKSDVYSFGVVLIEL----ISSMPAVDMNRHRHEINLANLAINKIQKCAFDE 510
T KSDV++FGV + E+ ++ P V N ++ L + + + C DE
Sbjct: 220 SLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQ-NHEMYDYLLHGHRLKQPEDC-LDE 277
Query: 511 LIDPCLGFESDEEVKRMTTSVAELAF 536
L + + + R T SV L
Sbjct: 278 LYEIMYSCWRTDPLDRPTFSVLRLQL 303
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 103/209 (49%), Gaps = 27/209 (12%)
Query: 287 EKELGDGGFGTVYYGKLKDGRE----VAVKRLYD-NNYRRVEQFMNEVEILTRLRHKNLV 341
++ +G G FG VY+G+ D + A+K L ++VE F+ E ++ L H N++
Sbjct: 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVL 85
Query: 342 SLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIR-------MNIAIETAS 394
+L G ++L E + + + HGD + + P R ++ ++ A
Sbjct: 86 ALIG--------IMLPPEGLPHVLLPYMCHGDLLQ--FIRSPQRNPTVKDLISFGLQVAR 135
Query: 395 ALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP----GY 450
+ YL +HRD+ N +LD +F VKVADFGL+R LD + S +
Sbjct: 136 GMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDI-LDREYYSVQQHRHARLPVKW 194
Query: 451 VDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
E Q Y+ T KSDV+SFGV+L EL++
Sbjct: 195 TALESLQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 95/206 (46%), Gaps = 10/206 (4%)
Query: 282 NDFSREKELGDGGFGTVYYGK-LKDGREVAVKRLYDNNY---RRVEQFMNEVEILTRLRH 337
DF K LG+G F TV + L RE A+K L + +V E ++++RL H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
V L+ T + + L + NG + + K G E SAL
Sbjct: 90 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTAEIVSALE 144
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLF-PLDVTHVSTAPQGTPGYVDPEYH 456
YLH IIHRD+K NILL+ + +++ DFG +++ P + A GT YV PE
Sbjct: 145 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELL 204
Query: 457 QCYQLTDKSDVYSFGVVLIELISSMP 482
SD+++ G ++ +L++ +P
Sbjct: 205 TEKSACKSSDLWALGCIIYQLVAGLP 230
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 109/232 (46%), Gaps = 19/232 (8%)
Query: 277 LAEATNDFSREKELGDGGFGTVYYGK-LKDGREVAVKRLYDNNYRR---VEQFMNEVEIL 332
+ E DF LG G F VY + + G EVA+K + + V++ NEV+I
Sbjct: 6 IGEKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIH 65
Query: 333 TRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAI-- 390
+L+H +++ L+ S + LV E NG + L +R K P N A
Sbjct: 66 CQLKHPSILELYNYFED-SNYVYLVLEMCHNGEMNRYL-KNRVK------PFSENEARHF 117
Query: 391 --ETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPL-DVTHVSTAPQGT 447
+ + + YLH+ I+HRD+ +N+LL N +K+ADFGL+ + H + GT
Sbjct: 118 MHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLC--GT 175
Query: 448 PGYVDPEYHQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHRHEINLANLA 499
P Y+ PE +SDV+S G + L+ P D + ++ +N LA
Sbjct: 176 PNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLA 227
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 93/206 (45%), Gaps = 10/206 (4%)
Query: 282 NDFSREKELGDGGFGTVYYGK-LKDGREVAVKRLYDNNY---RRVEQFMNEVEILTRLRH 337
DF K LG+G F TV + L RE A+K L + +V E ++++RL H
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
V L+ C + L + NG + + K G E SAL
Sbjct: 97 PFFVKLYFCFQD-DEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTAEIVSALE 151
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLF-PLDVTHVSTAPQGTPGYVDPEYH 456
YLH IIHRD+K NILL+ + +++ DFG +++ P + GT YV PE
Sbjct: 152 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 211
Query: 457 QCYQLTDKSDVYSFGVVLIELISSMP 482
SD+++ G ++ +L++ +P
Sbjct: 212 TEKSACKSSDLWALGCIIYQLVAGLP 237
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 96/206 (46%), Gaps = 10/206 (4%)
Query: 282 NDFSREKELGDGGFGTVYYGK-LKDGREVAVKRLYDNNY---RRVEQFMNEVEILTRLRH 337
DF K LG+G F TV + L RE A+K L + +V E ++++RL H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
V L+ T + + L + NG + + K G E SAL
Sbjct: 92 PFFVKLY-FTFQDDEKLYFGLSYAKNGCLLKYIR----KIGSFDETCTRFYTAEIVSALE 146
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLF-PLDVTHVSTAPQGTPGYVDPEYH 456
YLH IIHRD+K NILL+ + +++ DFG +++ P + + GT YV PE
Sbjct: 147 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL 206
Query: 457 QCYQLTDKSDVYSFGVVLIELISSMP 482
+ SD+++ G ++ +L++ +P
Sbjct: 207 TEKSASKSSDLWALGCIIYQLVAGLP 232
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 127/282 (45%), Gaps = 24/282 (8%)
Query: 288 KELGDGGFGTVY---YGKLKDG--REVAVKRLYDNNYRRVEQ-FMNEVEILTRLRHKNLV 341
++LG+G FG V Y DG VAVK L + ++ + E+EIL L H+++V
Sbjct: 14 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIV 73
Query: 342 SLFGCTS-RYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
GC + + + LV E+V G++ D L R GL + A + +AYLH
Sbjct: 74 KYKGCCEDQGEKSVQLVMEYVPLGSLRDYL--PRHCVGLAQL---LLFAQQICEGMAYLH 128
Query: 401 ASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPG--YVDPEYHQC 458
A IHR + N+LLD++ VK+ DFGL++ P + G + PE +
Sbjct: 129 AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKE 188
Query: 459 YQLTDKSDVYSFGVVLIELISSMPAVDMNRHRHEINLANLAINKIQKCAFDELIDPCLGF 518
+ SDV+SFGV L EL++ + + + H L ++ EL+
Sbjct: 189 CKFYYASDVWSFGVTLYELLTYCDS-NQSPHTKFTELIGHTQGQMTVLRLTELL------ 241
Query: 519 ESDEEVKRMTTSVAELAFL---CLQQNKELRPSMEEVLAELQ 557
E E + R E+ L C + RP+ + ++ LQ
Sbjct: 242 ERGERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPILQ 283
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 127/282 (45%), Gaps = 24/282 (8%)
Query: 288 KELGDGGFGTVY---YGKLKDG--REVAVKRLYDNNYRRVEQ-FMNEVEILTRLRHKNLV 341
++LG+G FG V Y DG VAVK L + ++ + E+EIL L H+++V
Sbjct: 15 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIV 74
Query: 342 SLFGC-TSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
GC + + + LV E+V G++ D L R GL + A + +AYLH
Sbjct: 75 KYKGCCEDQGEKSVQLVMEYVPLGSLRDYL--PRHCVGLAQL---LLFAQQICEGMAYLH 129
Query: 401 ASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPG--YVDPEYHQC 458
A IHR + N+LLD++ VK+ DFGL++ P + G + PE +
Sbjct: 130 AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKE 189
Query: 459 YQLTDKSDVYSFGVVLIELISSMPAVDMNRHRHEINLANLAINKIQKCAFDELIDPCLGF 518
+ SDV+SFGV L EL++ + + + H L ++ EL+
Sbjct: 190 CKFYYASDVWSFGVTLYELLTYCDS-NQSPHTKFTELIGHTQGQMTVLRLTELL------ 242
Query: 519 ESDEEVKRMTTSVAELAFL---CLQQNKELRPSMEEVLAELQ 557
E E + R E+ L C + RP+ + ++ LQ
Sbjct: 243 ERGERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPILQ 284
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 95/206 (46%), Gaps = 10/206 (4%)
Query: 282 NDFSREKELGDGGFGTVYYGK-LKDGREVAVKRLYDNNY---RRVEQFMNEVEILTRLRH 337
DF K LG+G F TV + L RE A+K L + +V E ++++RL H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
V L+ T + + L + NG + + K G E SAL
Sbjct: 93 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTAEIVSALE 147
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLF-PLDVTHVSTAPQGTPGYVDPEYH 456
YLH IIHRD+K NILL+ + +++ DFG +++ P + + GT YV PE
Sbjct: 148 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL 207
Query: 457 QCYQLTDKSDVYSFGVVLIELISSMP 482
SD+++ G ++ +L++ +P
Sbjct: 208 TEKSACKSSDLWALGCIIYQLVAGLP 233
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 94/206 (45%), Gaps = 10/206 (4%)
Query: 282 NDFSREKELGDGGFGTVYYGK-LKDGREVAVKRLYDNNY---RRVEQFMNEVEILTRLRH 337
DF K LG+G F TV + L RE A+K L + +V E ++++RL H
Sbjct: 10 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 69
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
V L+ T + + L + NG + + K G E SAL
Sbjct: 70 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTAEIVSALE 124
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLF-PLDVTHVSTAPQGTPGYVDPEYH 456
YLH IIHRD+K NILL+ + +++ DFG +++ P + GT YV PE
Sbjct: 125 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 184
Query: 457 QCYQLTDKSDVYSFGVVLIELISSMP 482
SD+++ G ++ +L++ +P
Sbjct: 185 TEKSACKSSDLWALGCIIYQLVAGLP 210
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 94/206 (45%), Gaps = 10/206 (4%)
Query: 282 NDFSREKELGDGGFGTVYYGK-LKDGREVAVKRLYDNNY---RRVEQFMNEVEILTRLRH 337
DF K LG+G F TV + L RE A+K L + +V E ++++RL H
Sbjct: 9 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 68
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
V L+ T + + L + NG + + K G E SAL
Sbjct: 69 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTAEIVSALE 123
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLF-PLDVTHVSTAPQGTPGYVDPEYH 456
YLH IIHRD+K NILL+ + +++ DFG +++ P + GT YV PE
Sbjct: 124 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 183
Query: 457 QCYQLTDKSDVYSFGVVLIELISSMP 482
SD+++ G ++ +L++ +P
Sbjct: 184 TEKSACKSSDLWALGCIIYQLVAGLP 209
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 100/200 (50%), Gaps = 18/200 (9%)
Query: 290 LGDGGFGTVYYGKLK-DGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSL---FG 345
LG G F V+ K + G+ A+K + + R NE+ +L +++H+N+V+L +
Sbjct: 17 LGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYE 76
Query: 346 CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDII 405
T+ Y LV + V+ G + D++ + G+ T + + SA+ YLH + I+
Sbjct: 77 STTHY----YLVMQLVSGGELFDRI----LERGVYTEKDASLVIQQVLSAVKYLHENGIV 128
Query: 406 HRDVKTNNILL---DSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQLT 462
HRD+K N+L + N + + DFGLS+ ++ + + GTPGYV PE +
Sbjct: 129 HRDLKPENLLYLTPEENSKIMITDFGLSK---MEQNGIMSTACGTPGYVAPEVLAQKPYS 185
Query: 463 DKSDVYSFGVVLIELISSMP 482
D +S GV+ L+ P
Sbjct: 186 KAVDCWSIGVITYILLCGYP 205
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 111/221 (50%), Gaps = 36/221 (16%)
Query: 288 KELGDGGFGTVYYG--------KLKDGREVAVKRLYDNNYRR-VEQFMNEVEILTRL-RH 337
K LG+G FG V K K+ VAVK L D+ + + ++E+E++ + +H
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHG------------DRAKHGLLTWPIR 385
KN+++L G ++ L ++ E+ + G + + L +R +T+
Sbjct: 101 KNIINLLGACTQ-DGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDL 159
Query: 386 MNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQ 445
++ + A + YL + IHRD+ N+L+ N +K+ADFGL+R D+ ++ +
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDXXKK 215
Query: 446 GTPG-----YVDPE--YHQCYQLTDKSDVYSFGVVLIELIS 479
T G ++ PE + + Y T +SDV+SFGV++ E+ +
Sbjct: 216 TTNGRLPVKWMAPEALFDRVY--THQSDVWSFGVLMWEIFT 254
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 94/206 (45%), Gaps = 10/206 (4%)
Query: 282 NDFSREKELGDGGFGTVYYGK-LKDGREVAVKRLYDNNY---RRVEQFMNEVEILTRLRH 337
DF K LG+G F TV + L RE A+K L + +V E ++++RL H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
V L+ T + + L + NG + + K G E SAL
Sbjct: 92 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTAEIVSALE 146
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLF-PLDVTHVSTAPQGTPGYVDPEYH 456
YLH IIHRD+K NILL+ + +++ DFG +++ P + GT YV PE
Sbjct: 147 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 457 QCYQLTDKSDVYSFGVVLIELISSMP 482
SD+++ G ++ +L++ +P
Sbjct: 207 TEKSAXKSSDLWALGCIIYQLVAGLP 232
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 94/206 (45%), Gaps = 10/206 (4%)
Query: 282 NDFSREKELGDGGFGTVYYGK-LKDGREVAVKRLYDNNY---RRVEQFMNEVEILTRLRH 337
DF K LG+G F TV + L RE A+K L + +V E ++++RL H
Sbjct: 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 67
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
V L+ T + + L + NG + + K G E SAL
Sbjct: 68 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTAEIVSALE 122
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLF-PLDVTHVSTAPQGTPGYVDPEYH 456
YLH IIHRD+K NILL+ + +++ DFG +++ P + GT YV PE
Sbjct: 123 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 182
Query: 457 QCYQLTDKSDVYSFGVVLIELISSMP 482
SD+++ G ++ +L++ +P
Sbjct: 183 TEKSACKSSDLWALGCIIYQLVAGLP 208
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 94/206 (45%), Gaps = 10/206 (4%)
Query: 282 NDFSREKELGDGGFGTVYYGK-LKDGREVAVKRLYDNNY---RRVEQFMNEVEILTRLRH 337
DF K LG+G F TV + L RE A+K L + +V E ++++RL H
Sbjct: 7 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 66
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
V L+ T + + L + NG + + K G E SAL
Sbjct: 67 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTAEIVSALE 121
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLF-PLDVTHVSTAPQGTPGYVDPEYH 456
YLH IIHRD+K NILL+ + +++ DFG +++ P + GT YV PE
Sbjct: 122 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 181
Query: 457 QCYQLTDKSDVYSFGVVLIELISSMP 482
SD+++ G ++ +L++ +P
Sbjct: 182 TEKSACKSSDLWALGCIIYQLVAGLP 207
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 96/198 (48%), Gaps = 9/198 (4%)
Query: 289 ELGDGGFGTVYYGK-LKDGREVAVKRLY---DNNYRRVEQFMNEVEILTRLRHKNLVSLF 344
+LG GG TVY + +VA+K ++ +++F EV ++L H+N+VS+
Sbjct: 18 KLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMI 77
Query: 345 GCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDI 404
LV E++ T+++ + HG L+ +N + + + H I
Sbjct: 78 DVDEE-DDCYYLVMEYIEGPTLSEYIES----HGPLSVDTAINFTNQILDGIKHAHDMRI 132
Query: 405 IHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQLTDK 464
+HRD+K NIL+DSN +K+ DFG+++ + GT Y PE + +
Sbjct: 133 VHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDEC 192
Query: 465 SDVYSFGVVLIELISSMP 482
+D+YS G+VL E++ P
Sbjct: 193 TDIYSIGIVLYEMLVGEP 210
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 20/209 (9%)
Query: 282 NDFSREKELGDGGFGTVYYG-KLKDGREV----AVKRLYDNNYRRV-EQFMNEVEILTRL 335
+ + K LG G FGTVY G + DG V A+K L +N + ++ ++E ++ +
Sbjct: 17 TELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGV 76
Query: 336 RHKNLVSLFG-CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHG---LLTWPIRMNIAIE 391
+ L G C + Q LV + + G + D + +R + G LL W ++
Sbjct: 77 GSPYVSRLLGICLTSTVQ---LVTQLMPYGCLLDHVRENRGRLGSQDLLNW------CMQ 127
Query: 392 TASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP-GY 450
A ++YL ++HRD+ N+L+ S VK+ DFGL+RL +D T P +
Sbjct: 128 IAKGMSYLEDVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKW 187
Query: 451 VDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
+ E + T +SDV+S+GV + EL++
Sbjct: 188 MALESILRRRFTHQSDVWSYGVTVWELMT 216
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 111/221 (50%), Gaps = 36/221 (16%)
Query: 288 KELGDGGFGTVYYG--------KLKDGREVAVKRLYDNNYRR-VEQFMNEVEILTRL-RH 337
K LG+G FG V K K+ VAVK L D+ + + ++E+E++ + +H
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHG------------DRAKHGLLTWPIR 385
KN+++L G ++ L ++ E+ + G + + L +R +T+
Sbjct: 101 KNIINLLGACTQ-DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 386 MNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQ 445
++ + A + YL + IHRD+ N+L+ N +K+ADFGL+R D+ ++ +
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDXXKK 215
Query: 446 GTPG-----YVDPE--YHQCYQLTDKSDVYSFGVVLIELIS 479
T G ++ PE + + Y T +SDV+SFGV++ E+ +
Sbjct: 216 TTNGRLPVKWMAPEALFDRVY--THQSDVWSFGVLMWEIFT 254
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 108/241 (44%), Gaps = 26/241 (10%)
Query: 282 NDFSREKELGDGGFGTVYYGKLK-DGREVAVKRL-YDNNYRRVEQFMNEVEILTRLRHKN 339
DF + LG GGFG V+ K K D A+KR+ N E+ M EV+ L +L H
Sbjct: 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 64
Query: 340 LVSLFGC------TSRYSQGLLLVYEFVA-----NGTVADQLHGDRAKHGLLTWPIRMNI 388
+V F T + VY ++ + D ++G R + ++I
Sbjct: 65 IVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNG-RCTIEERERSVCLHI 123
Query: 389 AIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGL-----------SRLFPLDV 437
++ A A+ +LH+ ++HRD+K +NI + VKV DFGL + L P+
Sbjct: 124 FLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPA 183
Query: 438 THVSTAPQGTPGYVDPEYHQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHRHEINLAN 497
T GT Y+ PE + K D++S G++L EL+ + M R R ++ N
Sbjct: 184 YARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLYPF-STQMERVRTLTDVRN 242
Query: 498 L 498
L
Sbjct: 243 L 243
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 100/202 (49%), Gaps = 13/202 (6%)
Query: 290 LGDGGFGTVYYGK-LKDGREVAVKRLYDNNYRRVE---QFMNEVEILTRLRHKNLVSLFG 345
LG GG V+ + L+ R+VAVK L + R +F E + L H +V+++
Sbjct: 20 LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYA 79
Query: 346 C-TSRYSQGLL--LVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHAS 402
+ G L +V E+V T+ D +H + G +T + + + AL + H +
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIADACQALNFSHQN 135
Query: 403 DIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHV--STAPQGTPGYVDPEYHQCYQ 460
IIHRDVK NI++ + VKV DFG++R V + A GT Y+ PE +
Sbjct: 136 GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDS 195
Query: 461 LTDKSDVYSFGVVLIELISSMP 482
+ +SDVYS G VL E+++ P
Sbjct: 196 VDARSDVYSLGCVLYEVLTGEP 217
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 94/206 (45%), Gaps = 10/206 (4%)
Query: 282 NDFSREKELGDGGFGTVYYGK-LKDGREVAVKRLYDNNY---RRVEQFMNEVEILTRLRH 337
DF K LG+G F TV + L RE A+K L + +V E ++++RL H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
V L+ T + + L + NG + + K G E SAL
Sbjct: 93 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTAEIVSALE 147
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLF-PLDVTHVSTAPQGTPGYVDPEYH 456
YLH IIHRD+K NILL+ + +++ DFG +++ P + GT YV PE
Sbjct: 148 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 207
Query: 457 QCYQLTDKSDVYSFGVVLIELISSMP 482
SD+++ G ++ +L++ +P
Sbjct: 208 TEKSACKSSDLWALGCIIYQLVAGLP 233
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 95/206 (46%), Gaps = 10/206 (4%)
Query: 282 NDFSREKELGDGGFGTVYYGK-LKDGREVAVKRLYDNNY---RRVEQFMNEVEILTRLRH 337
DF K LG+G F TV + L RE A+K L + +V E ++++RL H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
V L+ T + + L + NG + + K G E SAL
Sbjct: 89 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTAEIVSALE 143
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLF-PLDVTHVSTAPQGTPGYVDPEYH 456
YLH IIHRD+K NILL+ + +++ DFG +++ P + + GT YV PE
Sbjct: 144 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL 203
Query: 457 QCYQLTDKSDVYSFGVVLIELISSMP 482
SD+++ G ++ +L++ +P
Sbjct: 204 TEKSACKSSDLWALGCIIYQLVAGLP 229
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 100/202 (49%), Gaps = 9/202 (4%)
Query: 282 NDFSREKELGDGGFGTVYYGKLK-DGREVAVKRLYDNNYRRVE-QFMNEVEILTRLRHKN 339
D +++G G FG V+ G+L+ D VAVK + ++ +F+ E IL + H N
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPN 173
Query: 340 LVSLFG-CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAY 398
+V L G CT + Q + +V E V G L + A+ + T + + + A+ + Y
Sbjct: 174 IVRLIGVCTQK--QPIYIVMELVQGGDFLTFLRTEGARLRVKT---LLQMVGDAAAGMEY 228
Query: 399 LHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP-GYVDPEYHQ 457
L + IHRD+ N L+ +K++DFG+SR V S + P + PE
Sbjct: 229 LESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALN 288
Query: 458 CYQLTDKSDVYSFGVVLIELIS 479
+ + +SDV+SFG++L E S
Sbjct: 289 YGRYSSESDVWSFGILLWETFS 310
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 94/206 (45%), Gaps = 10/206 (4%)
Query: 282 NDFSREKELGDGGFGTVYYGK-LKDGREVAVKRLYDNNY---RRVEQFMNEVEILTRLRH 337
DF K LG+G F TV + L RE A+K L + +V E ++++RL H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
V L+ T + + L + NG + + K G E SAL
Sbjct: 92 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTAEIVSALE 146
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLF-PLDVTHVSTAPQGTPGYVDPEYH 456
YLH IIHRD+K NILL+ + +++ DFG +++ P + GT YV PE
Sbjct: 147 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 457 QCYQLTDKSDVYSFGVVLIELISSMP 482
SD+++ G ++ +L++ +P
Sbjct: 207 TEKSACKSSDLWALGCIIYQLVAGLP 232
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 94/206 (45%), Gaps = 10/206 (4%)
Query: 282 NDFSREKELGDGGFGTVYYGK-LKDGREVAVKRLYDNNY---RRVEQFMNEVEILTRLRH 337
DF K LG+G F TV + L RE A+K L + +V E ++++RL H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
V L+ T + + L + NG + + K G E SAL
Sbjct: 92 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTAEIVSALE 146
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLF-PLDVTHVSTAPQGTPGYVDPEYH 456
YLH IIHRD+K NILL+ + +++ DFG +++ P + GT YV PE
Sbjct: 147 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 457 QCYQLTDKSDVYSFGVVLIELISSMP 482
SD+++ G ++ +L++ +P
Sbjct: 207 TEKSACKSSDLWALGCIIYQLVAGLP 232
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 94/206 (45%), Gaps = 10/206 (4%)
Query: 282 NDFSREKELGDGGFGTVYYGK-LKDGREVAVKRLYDNNY---RRVEQFMNEVEILTRLRH 337
DF K LG+G F TV + L RE A+K L + +V E ++++RL H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
V L+ T + + L + NG + + K G E SAL
Sbjct: 92 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTAEIVSALE 146
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLF-PLDVTHVSTAPQGTPGYVDPEYH 456
YLH IIHRD+K NILL+ + +++ DFG +++ P + GT YV PE
Sbjct: 147 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 457 QCYQLTDKSDVYSFGVVLIELISSMP 482
SD+++ G ++ +L++ +P
Sbjct: 207 TEKSACKSSDLWALGCIIYQLVAGLP 232
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 94/206 (45%), Gaps = 10/206 (4%)
Query: 282 NDFSREKELGDGGFGTVYYGK-LKDGREVAVKRLYDNNY---RRVEQFMNEVEILTRLRH 337
DF K LG+G F TV + L RE A+K L + +V E ++++RL H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
V L+ T + + L + NG + + K G E SAL
Sbjct: 92 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTAEIVSALE 146
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLF-PLDVTHVSTAPQGTPGYVDPEYH 456
YLH IIHRD+K NILL+ + +++ DFG +++ P + GT YV PE
Sbjct: 147 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 457 QCYQLTDKSDVYSFGVVLIELISSMP 482
SD+++ G ++ +L++ +P
Sbjct: 207 TEKSACKSSDLWALGCIIYQLVAGLP 232
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 94/206 (45%), Gaps = 10/206 (4%)
Query: 282 NDFSREKELGDGGFGTVYYGK-LKDGREVAVKRLYDNNY---RRVEQFMNEVEILTRLRH 337
DF K LG+G F TV + L RE A+K L + +V E ++++RL H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
V L+ T + + L + NG + + K G E SAL
Sbjct: 90 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTAEIVSALE 144
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLF-PLDVTHVSTAPQGTPGYVDPEYH 456
YLH IIHRD+K NILL+ + +++ DFG +++ P + GT YV PE
Sbjct: 145 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 204
Query: 457 QCYQLTDKSDVYSFGVVLIELISSMP 482
SD+++ G ++ +L++ +P
Sbjct: 205 TEKSACKSSDLWALGCIIYQLVAGLP 230
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 94/206 (45%), Gaps = 10/206 (4%)
Query: 282 NDFSREKELGDGGFGTVYYGK-LKDGREVAVKRLYDNNY---RRVEQFMNEVEILTRLRH 337
DF K LG+G F TV + L RE A+K L + +V E ++++RL H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
V L+ T + + L + NG + + K G E SAL
Sbjct: 90 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTAEIVSALE 144
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLF-PLDVTHVSTAPQGTPGYVDPEYH 456
YLH IIHRD+K NILL+ + +++ DFG +++ P + GT YV PE
Sbjct: 145 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 204
Query: 457 QCYQLTDKSDVYSFGVVLIELISSMP 482
SD+++ G ++ +L++ +P
Sbjct: 205 TEKSACKSSDLWALGCIIYQLVAGLP 230
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 94/206 (45%), Gaps = 10/206 (4%)
Query: 282 NDFSREKELGDGGFGTVYYGK-LKDGREVAVKRLYDNNY---RRVEQFMNEVEILTRLRH 337
DF K LG+G F TV + L RE A+K L + +V E ++++RL H
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
V L+ T + + L + NG + + K G E SAL
Sbjct: 74 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTAEIVSALE 128
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLF-PLDVTHVSTAPQGTPGYVDPEYH 456
YLH IIHRD+K NILL+ + +++ DFG +++ P + GT YV PE
Sbjct: 129 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 188
Query: 457 QCYQLTDKSDVYSFGVVLIELISSMP 482
SD+++ G ++ +L++ +P
Sbjct: 189 TEKSACKSSDLWALGCIIYQLVAGLP 214
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 104/212 (49%), Gaps = 25/212 (11%)
Query: 288 KELGDGGFGTVYYGKLKDGR-EVAVKRL---------YDNNYRRVEQF----MNEVEILT 333
++LG G +G V K K+G E A+K + Y ++ + +E+F NE+ +L
Sbjct: 42 RKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLK 101
Query: 334 RLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETA 393
L H N++ LF + LV EF G + +Q+ +R K NI +
Sbjct: 102 SLDHPNIIKLFDVFED-KKYFYLVTEFYEGGELFEQII-NRHKFDECDAA---NIMKQIL 156
Query: 394 SALAYLHASDIIHRDVKTNNILLD---SNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGY 450
S + YLH +I+HRD+K NILL+ S +K+ DFGLS F D + GT Y
Sbjct: 157 SGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKD--YKLRDRLGTAYY 214
Query: 451 VDPEYHQCYQLTDKSDVYSFGVVLIELISSMP 482
+ PE + + +K DV+S GV++ L+ P
Sbjct: 215 IAPEVLKK-KYNEKCDVWSCGVIMYILLCGYP 245
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 94/206 (45%), Gaps = 10/206 (4%)
Query: 282 NDFSREKELGDGGFGTVYYGK-LKDGREVAVKRLYDNNY---RRVEQFMNEVEILTRLRH 337
DF K LG+G F TV + L RE A+K L + +V E ++++RL H
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
V L+ T + + L + NG + + K G E SAL
Sbjct: 95 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTAEIVSALE 149
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLF-PLDVTHVSTAPQGTPGYVDPEYH 456
YLH IIHRD+K NILL+ + +++ DFG +++ P + GT YV PE
Sbjct: 150 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 209
Query: 457 QCYQLTDKSDVYSFGVVLIELISSMP 482
SD+++ G ++ +L++ +P
Sbjct: 210 TEKSACKSSDLWALGCIIYQLVAGLP 235
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 100/202 (49%), Gaps = 9/202 (4%)
Query: 282 NDFSREKELGDGGFGTVYYGKLK-DGREVAVKRLYDNNYRRVE-QFMNEVEILTRLRHKN 339
D +++G G FG V+ G+L+ D VAVK + ++ +F+ E IL + H N
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPN 173
Query: 340 LVSLFG-CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAY 398
+V L G CT + Q + +V E V G L + A+ + T + + + A+ + Y
Sbjct: 174 IVRLIGVCTQK--QPIYIVMELVQGGDFLTFLRTEGARLRVKT---LLQMVGDAAAGMEY 228
Query: 399 LHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP-GYVDPEYHQ 457
L + IHRD+ N L+ +K++DFG+SR V S + P + PE
Sbjct: 229 LESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALN 288
Query: 458 CYQLTDKSDVYSFGVVLIELIS 479
+ + +SDV+SFG++L E S
Sbjct: 289 YGRYSSESDVWSFGILLWETFS 310
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 94/206 (45%), Gaps = 10/206 (4%)
Query: 282 NDFSREKELGDGGFGTVYYGK-LKDGREVAVKRLYDNNY---RRVEQFMNEVEILTRLRH 337
DF K LG+G F TV + L RE A+K L + +V E ++++RL H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
V L+ T + + L + NG + + K G E SAL
Sbjct: 89 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTAEIVSALE 143
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLF-PLDVTHVSTAPQGTPGYVDPEYH 456
YLH IIHRD+K NILL+ + +++ DFG +++ P + GT YV PE
Sbjct: 144 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 203
Query: 457 QCYQLTDKSDVYSFGVVLIELISSMP 482
SD+++ G ++ +L++ +P
Sbjct: 204 TEKSACKSSDLWALGCIIYQLVAGLP 229
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 98/212 (46%), Gaps = 24/212 (11%)
Query: 283 DFSREKELGDGGFGTVYYGKLK-DGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLV 341
DF + +G GGFG V+ K + DG+ +KR+ NN E+ EV+ L +L H N+V
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIV 67
Query: 342 SLFGCTSRY---------------SQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRM 386
GC + ++ L + EF GT+ + R + L + +
Sbjct: 68 HYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEK--LDKVLAL 125
Query: 387 NIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQG 446
+ + + Y+H+ +I+RD+K +NI L VK+ DFGL D + +G
Sbjct: 126 ELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRS--KG 183
Query: 447 TPGYVDPEYHQCYQLTDKSDVYSFGVVLIELI 478
T Y+ PE + D+Y+ G++L EL+
Sbjct: 184 TLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 100/202 (49%), Gaps = 13/202 (6%)
Query: 290 LGDGGFGTVYYGK-LKDGREVAVKRLYDNNYRRVE---QFMNEVEILTRLRHKNLVSLFG 345
LG GG V+ + L+ R+VAVK L + R +F E + L H +V+++
Sbjct: 20 LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 346 C-TSRYSQGLL--LVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHAS 402
+ G L +V E+V T+ D +H + G +T + + + AL + H +
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIADACQALNFSHQN 135
Query: 403 DIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHV--STAPQGTPGYVDPEYHQCYQ 460
IIHRDVK NI++ + VKV DFG++R V + A GT Y+ PE +
Sbjct: 136 GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDS 195
Query: 461 LTDKSDVYSFGVVLIELISSMP 482
+ +SDVYS G VL E+++ P
Sbjct: 196 VDARSDVYSLGCVLYEVLTGEP 217
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 108/219 (49%), Gaps = 32/219 (14%)
Query: 288 KELGDGGFGTVYYG--------KLKDGREVAVKRLYDNNYRR-VEQFMNEVEILTRL-RH 337
K LG+G FG V K K+ VAVK L D+ + + ++E+E++ + +H
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHG------------DRAKHGLLTWPIR 385
KN+++L G ++ L ++ E+ + G + + L +R +T+
Sbjct: 101 KNIITLLGACTQ-DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 386 MNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQ 445
++ + A + YL + IHRD+ N+L+ N +K+ADFGL+R D+ ++ +
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKK 215
Query: 446 GTPG-----YVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
T G ++ PE T +SDV+SFGV++ E+ +
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 105/212 (49%), Gaps = 21/212 (9%)
Query: 288 KELGDGGFGTVYYGKL------KDGREVAVKRLYDNNYRRV-EQFMNEVEILTRLRHKNL 340
+ELG+ FG VY G L + + VA+K L D + E+F +E + RL+H N+
Sbjct: 32 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV 91
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQL------------HGDRAKHGLLTWPIRMNI 388
V L G ++ Q L +++ + ++G + + L DR L P +++
Sbjct: 92 VCLLGVVTK-DQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHL 150
Query: 389 AIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSR-LFPLDVTHVSTAPQGT 447
+ A+ + YL + ++H+D+ T N+L+ VK++D GL R ++ D +
Sbjct: 151 VAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLP 210
Query: 448 PGYVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
++ PE + + SD++S+GVVL E+ S
Sbjct: 211 IRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 101/200 (50%), Gaps = 8/200 (4%)
Query: 284 FSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVS 342
F ++LG+G +G+VY K+ G+ VA+K++ + +++ + E+ I+ + ++V
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVK 88
Query: 343 LFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHAS 402
+G + + L +V E+ G+V+D + R ++ LT I T L YLH
Sbjct: 89 YYGSYFKNTD-LWIVMEYCGAGSVSDII---RLRNKTLTEDEIATILQSTLKGLEYLHFM 144
Query: 403 DIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQLT 462
IHRD+K NILL++ K+ADFG++ D GTP ++ PE Q
Sbjct: 145 RKIHRDIKAGNILLNTEGHAKLADFGVAGQL-TDXMAKRNXVIGTPFWMAPEVIQEIGYN 203
Query: 463 DKSDVYSFGVVLIELISSMP 482
+D++S G+ IE+ P
Sbjct: 204 CVADIWSLGITAIEMAEGKP 223
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 95/202 (47%), Gaps = 10/202 (4%)
Query: 290 LGDGGFGTVYYGKLK-DGREVAVKRLYDNNYRRVEQFM--NEVEILTRLRHKNLVSLFG- 345
+G G +G + K DG+ + K L + E+ M +EV +L L+H N+V +
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 346 CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH----- 400
R + L +V E+ G +A + + L + + + AL H
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 401 ASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQ 460
++HRD+K N+ LD VK+ DFGL+R+ D T + A GTP Y+ PE
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD-TSFAKAFVGTPYYMSPEQMNRMS 192
Query: 461 LTDKSDVYSFGVVLIELISSMP 482
+KSD++S G +L EL + MP
Sbjct: 193 YNEKSDIWSLGCLLYELCALMP 214
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 101/211 (47%), Gaps = 21/211 (9%)
Query: 288 KELGDGGFGTVY----YG--KLKDGREVAVKRLYDN-NYRRVEQFMNEVEILTRL-RHKN 339
K LG G FG V +G K R VAVK L + + M+E++IL + H N
Sbjct: 33 KPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 340 LVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAK--------HGLLTWPIRMNIAIE 391
+V+L G ++ L+++ EF G ++ L R + LT + + +
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQ 152
Query: 392 TASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP-GY 450
A + +L + IHRD+ NILL VK+ DFGL+R D +V P +
Sbjct: 153 VAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKW 212
Query: 451 VDPE--YHQCYQLTDKSDVYSFGVVLIELIS 479
+ PE + + Y T +SDV+SFGV+L E+ S
Sbjct: 213 MAPETIFDRVY--TIQSDVWSFGVLLWEIFS 241
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 105/212 (49%), Gaps = 21/212 (9%)
Query: 288 KELGDGGFGTVYYGKL------KDGREVAVKRLYDNNYRRV-EQFMNEVEILTRLRHKNL 340
+ELG+ FG VY G L + + VA+K L D + E+F +E + RL+H N+
Sbjct: 15 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV 74
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQL------------HGDRAKHGLLTWPIRMNI 388
V L G ++ Q L +++ + ++G + + L DR L P +++
Sbjct: 75 VCLLGVVTK-DQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHL 133
Query: 389 AIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSR-LFPLDVTHVSTAPQGT 447
+ A+ + YL + ++H+D+ T N+L+ VK++D GL R ++ D +
Sbjct: 134 VAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLP 193
Query: 448 PGYVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
++ PE + + SD++S+GVVL E+ S
Sbjct: 194 IRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 98/209 (46%), Gaps = 17/209 (8%)
Query: 288 KELGDGGFGTVY----YG--KLKDGREVAVKRLYDN-NYRRVEQFMNEVEILTRL-RHKN 339
K LG G FG V +G K R VAVK L + + M+E++IL + H N
Sbjct: 33 KPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 340 LVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAK--------HGLLTWPIRMNIAIE 391
+V+L G ++ L+++ EF G ++ L R + LT + + +
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQ 152
Query: 392 TASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP-GY 450
A + +L + IHRD+ NILL VK+ DFGL+R D +V P +
Sbjct: 153 VAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKW 212
Query: 451 VDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
+ PE T +SDV+SFGV+L E+ S
Sbjct: 213 MAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 105/205 (51%), Gaps = 12/205 (5%)
Query: 282 NDFSREKELGDGGFGTVYYG-KLKDGRE----VAVKRLYDNNYRRVEQFMNE-VEILTRL 335
+ + K LG G FGTV+ G + +G V +K + D + R+ Q + + + + L
Sbjct: 31 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSL 90
Query: 336 RHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASA 395
H ++V L G S L LV +++ G++ D + R G L + +N ++ A
Sbjct: 91 DHAHIVRLLGLCPGSS--LQLVTQYLPLGSLLDHV---RQHRGALGPQLLLNWGVQIAKG 145
Query: 396 LAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP-GYVDPE 454
+ YL ++HR++ N+LL S V+VADFG++ L P D + + TP ++ E
Sbjct: 146 MYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALE 205
Query: 455 YHQCYQLTDKSDVYSFGVVLIELIS 479
+ T +SDV+S+GV + EL++
Sbjct: 206 SIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 101/225 (44%), Gaps = 37/225 (16%)
Query: 283 DFSREKELGDGGFGTVYYGKLK-DGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLV 341
DF + +G GGFG V+ K + DG+ ++R+ NN E+ EV+ L +L H N+V
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNN----EKAEREVKALAKLDHVNIV 68
Query: 342 SLFGC----------------TSRY------------SQGLLLVYEFVANGTVADQLHGD 373
GC +S Y ++ L + EF GT+ +
Sbjct: 69 HYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR 128
Query: 374 RAKHGLLTWPIRMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLF 433
R + L + + + + + Y+H+ +IHRD+K +NI L VK+ DFGL +
Sbjct: 129 RGEK--LDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGL--VT 184
Query: 434 PLDVTHVSTAPQGTPGYVDPEYHQCYQLTDKSDVYSFGVVLIELI 478
L T +GT Y+ PE + D+Y+ G++L EL+
Sbjct: 185 SLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 97/211 (45%), Gaps = 19/211 (9%)
Query: 288 KELGDGGFGTVY----YG--KLKDGREVAVKRLYDN-NYRRVEQFMNEVEILTRL-RHKN 339
K LG G FG V +G K R VAVK L + + M+E++IL + H N
Sbjct: 35 KPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 94
Query: 340 LVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAK----------HGLLTWPIRMNIA 389
+V+L G ++ L+++ EF G ++ L R + LT + +
Sbjct: 95 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYS 154
Query: 390 IETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP- 448
+ A + +L + IHRD+ NILL VK+ DFGL+R D V P
Sbjct: 155 FQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL 214
Query: 449 GYVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
++ PE T +SDV+SFGV+L E+ S
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 94/202 (46%), Gaps = 10/202 (4%)
Query: 290 LGDGGFGTVYYGKLK-DGREVAVKRLYDNNYRRVEQFM--NEVEILTRLRHKNLVSLFG- 345
+G G +G + K DG+ + K L + E+ M +EV +L L+H N+V +
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 346 CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH----- 400
R + L +V E+ G +A + + L + + + AL H
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 401 ASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQ 460
++HRD+K N+ LD VK+ DFGL+R+ D + T GTP Y+ PE
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFV-GTPYYMSPEQMNRMS 192
Query: 461 LTDKSDVYSFGVVLIELISSMP 482
+KSD++S G +L EL + MP
Sbjct: 193 YNEKSDIWSLGCLLYELCALMP 214
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 100/202 (49%), Gaps = 13/202 (6%)
Query: 290 LGDGGFGTVYYGK-LKDGREVAVKRLYDNNYRRVE---QFMNEVEILTRLRHKNLVSLFG 345
LG GG V+ + L+ R+VAVK L + R +F E + L H +V+++
Sbjct: 37 LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 96
Query: 346 CT-SRYSQGLL--LVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHAS 402
+ G L +V E+V T+ D +H + G +T + + + AL + H +
Sbjct: 97 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIADACQALNFSHQN 152
Query: 403 DIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHV--STAPQGTPGYVDPEYHQCYQ 460
IIHRDVK NI++ + VKV DFG++R V + A GT Y+ PE +
Sbjct: 153 GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDS 212
Query: 461 LTDKSDVYSFGVVLIELISSMP 482
+ +SDVYS G VL E+++ P
Sbjct: 213 VDARSDVYSLGCVLYEVLTGEP 234
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 105/226 (46%), Gaps = 29/226 (12%)
Query: 282 NDFSREKELGDGGFGTVYYGK------LKDGREVAVKRLYDNNYRRVEQ-FMNEVEILTR 334
N+ +++G+G FG V+ + + VAVK L + ++ F E ++
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 106
Query: 335 LRHKNLVSLFGCTSRYSQGLLLVYEFVANG------------TVADQLHGDRAKHGLLTW 382
+ N+V L G + + + L++E++A G TV H D + ++
Sbjct: 107 FDNPNIVKLLGVCA-VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSS 165
Query: 383 PI--------RMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSR-LF 433
P ++ IA + A+ +AYL +HRD+ T N L+ N VK+ADFGLSR ++
Sbjct: 166 PGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIY 225
Query: 434 PLDVTHVSTAPQGTPGYVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
D ++ PE + T +SDV+++GVVL E+ S
Sbjct: 226 SADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 93/206 (45%), Gaps = 10/206 (4%)
Query: 282 NDFSREKELGDGGFGTVYYGK-LKDGREVAVKRLYDNNY---RRVEQFMNEVEILTRLRH 337
DF K LG+G F T + L RE A+K L + +V E ++++RL H
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
V L+ T + + L + NG + + K G E SAL
Sbjct: 90 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTAEIVSALE 144
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLF-PLDVTHVSTAPQGTPGYVDPEYH 456
YLH IIHRD+K NILL+ + +++ DFG +++ P + GT YV PE
Sbjct: 145 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 204
Query: 457 QCYQLTDKSDVYSFGVVLIELISSMP 482
SD+++ G ++ +L++ +P
Sbjct: 205 TEKSACKSSDLWALGCIIYQLVAGLP 230
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 107/219 (48%), Gaps = 32/219 (14%)
Query: 288 KELGDGGFGTVYYG--------KLKDGREVAVKRLYDNNYRR-VEQFMNEVEILTRL-RH 337
K LG+G FG V K K+ VAVK L D+ + + ++E+E++ + +H
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHG------------DRAKHGLLTWPIR 385
KN++ L G ++ L ++ E+ + G + + L +R +T+
Sbjct: 101 KNIIHLLGACTQ-DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 386 MNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQ 445
++ + A + YL + IHRD+ N+L+ N +K+ADFGL+R D+ ++ +
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKK 215
Query: 446 GTPG-----YVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
T G ++ PE T +SDV+SFGV++ E+ +
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 101/215 (46%), Gaps = 19/215 (8%)
Query: 277 LAEATNDFSREKE-------LGDGGFGTVYYGKLKD----GREVAVKRLYDNNYRRV-EQ 324
+ +T D+ ++E +G+G FG V+ G VA+K + V E+
Sbjct: 26 MGSSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREK 85
Query: 325 FMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPI 384
F+ E + + H ++V L G + + ++ E G + L + L + +
Sbjct: 86 FLQEALTMRQFDHPHIVKLIGVIT--ENPVWIIMELCTLGELRSFLQVRKYSLDLASLIL 143
Query: 385 RMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAP 444
A + ++ALAYL + +HRD+ N+L+ SN CVK+ DFGLSR D T+ +
Sbjct: 144 ---YAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASK 199
Query: 445 QGTP-GYVDPEYHQCYQLTDKSDVYSFGVVLIELI 478
P ++ PE + T SDV+ FGV + E++
Sbjct: 200 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 234
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 107/219 (48%), Gaps = 32/219 (14%)
Query: 288 KELGDGGFGTVYYG--------KLKDGREVAVKRLYDNNYRR-VEQFMNEVEILTRL-RH 337
K LG+G FG V K K+ VAVK L D+ + + ++E+E++ + +H
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHG------------DRAKHGLLTWPIR 385
KN+++L G ++ L ++ E+ + G + + L +R +T+
Sbjct: 101 KNIINLLGACTQ-DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 386 MNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQ 445
++ + A + YL + IHRD+ N+L+ N +K+ADFGL+R D+ ++
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKN 215
Query: 446 GTPG-----YVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
T G ++ PE T +SDV+SFGV++ E+ +
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 101/215 (46%), Gaps = 19/215 (8%)
Query: 277 LAEATNDFSREKE-------LGDGGFGTVYYGKLKD----GREVAVKRLYDNNYRRV-EQ 324
+ +T D+ ++E +G+G FG V+ G VA+K + V E+
Sbjct: 3 MGSSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREK 62
Query: 325 FMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPI 384
F+ E + + H ++V L G + + ++ E G + L + L + +
Sbjct: 63 FLQEALTMRQFDHPHIVKLIGVIT--ENPVWIIMELCTLGELRSFLQVRKYSLDLASLIL 120
Query: 385 RMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAP 444
A + ++ALAYL + +HRD+ N+L+ SN CVK+ DFGLSR D T+ +
Sbjct: 121 ---YAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASK 176
Query: 445 QGTP-GYVDPEYHQCYQLTDKSDVYSFGVVLIELI 478
P ++ PE + T SDV+ FGV + E++
Sbjct: 177 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 211
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 100/212 (47%), Gaps = 19/212 (8%)
Query: 280 ATNDFSREKE-------LGDGGFGTVYYGKLKD----GREVAVKRLYDNNYRRV-EQFMN 327
+T D+ ++E +G+G FG V+ G VA+K + V E+F+
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 60
Query: 328 EVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMN 387
E + + H ++V L G + + ++ E G + L + L + +
Sbjct: 61 EALTMRQFDHPHIVKLIGVIT--ENPVWIIMELCTLGELRSFLQVRKYSLDLASLIL--- 115
Query: 388 IAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGT 447
A + ++ALAYL + +HRD+ N+L+ SN CVK+ DFGLSR D T+ +
Sbjct: 116 YAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKL 174
Query: 448 P-GYVDPEYHQCYQLTDKSDVYSFGVVLIELI 478
P ++ PE + T SDV+ FGV + E++
Sbjct: 175 PIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 107/219 (48%), Gaps = 32/219 (14%)
Query: 288 KELGDGGFGTVYYG--------KLKDGREVAVKRLYDNNYRR-VEQFMNEVEILTRL-RH 337
K LG+G FG V K K+ VAVK L D+ + ++E+E++ + +H
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKH 100
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHG------------DRAKHGLLTWPIR 385
KN+++L G ++ L ++ E+ + G + + L +R +T+
Sbjct: 101 KNIINLLGACTQ-DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 386 MNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQ 445
++ + A + YL + IHRD+ N+L+ N +K+ADFGL+R D+ ++ +
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKK 215
Query: 446 GTPG-----YVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
T G ++ PE T +SDV+SFGV++ E+ +
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 105/205 (51%), Gaps = 12/205 (5%)
Query: 282 NDFSREKELGDGGFGTVYYG-KLKDGRE----VAVKRLYDNNYRRVEQFMNE-VEILTRL 335
+ + K LG G FGTV+ G + +G V +K + D + R+ Q + + + + L
Sbjct: 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSL 72
Query: 336 RHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASA 395
H ++V L G S L LV +++ G++ D + R G L + +N ++ A
Sbjct: 73 DHAHIVRLLGLCPGSS--LQLVTQYLPLGSLLDHV---RQHRGALGPQLLLNWGVQIAKG 127
Query: 396 LAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP-GYVDPE 454
+ YL ++HR++ N+LL S V+VADFG++ L P D + + TP ++ E
Sbjct: 128 MYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALE 187
Query: 455 YHQCYQLTDKSDVYSFGVVLIELIS 479
+ T +SDV+S+GV + EL++
Sbjct: 188 SIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 106/219 (48%), Gaps = 28/219 (12%)
Query: 282 NDFSREKELGDGGFGTVYYGKLK-DG--REVAVKRLYD----NNYRRVEQFMNEVEILTR 334
ND + +G+G FG V ++K DG + A+KR+ + +++R F E+E+L +
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHR---DFAGELEVLCK 71
Query: 335 L-RHKNLVSLFG-CTSRYSQGLLLVYEFVANGTVADQLHGDR------------AKHGLL 380
L H N+++L G C R L L E+ +G + D L R + L
Sbjct: 72 LGHHPNIINLLGACEHR--GYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTL 129
Query: 381 TWPIRMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHV 440
+ ++ A + A + YL IHRD+ NIL+ N+ K+ADFGLSR +V
Sbjct: 130 SSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR--GQEVYVK 187
Query: 441 STAPQGTPGYVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
T + ++ E T SDV+S+GV+L E++S
Sbjct: 188 KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 108/219 (49%), Gaps = 32/219 (14%)
Query: 288 KELGDGGFGTVYYG--------KLKDGREVAVKRLYDNNYRR-VEQFMNEVEILTRL-RH 337
K LG+G FG V K K+ VAVK L D+ + + ++E+E++ + +H
Sbjct: 87 KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 146
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHG------------DRAKHGLLTWPIR 385
KN+++L G ++ L ++ E+ + G + + L +R +T+
Sbjct: 147 KNIINLLGACTQ-DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 205
Query: 386 MNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQ 445
++ + A + YL + IHRD+ N+L+ N +K+ADFGL+R D+ ++ +
Sbjct: 206 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKK 261
Query: 446 GTPG-----YVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
T G ++ PE T +SDV+SFGV++ E+ +
Sbjct: 262 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 106/219 (48%), Gaps = 28/219 (12%)
Query: 282 NDFSREKELGDGGFGTVYYGKLK-DG--REVAVKRLYD----NNYRRVEQFMNEVEILTR 334
ND + +G+G FG V ++K DG + A+KR+ + +++R F E+E+L +
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHR---DFAGELEVLCK 81
Query: 335 L-RHKNLVSLFG-CTSRYSQGLLLVYEFVANGTVADQLHGDR------------AKHGLL 380
L H N+++L G C R L L E+ +G + D L R + L
Sbjct: 82 LGHHPNIINLLGACEHR--GYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTL 139
Query: 381 TWPIRMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHV 440
+ ++ A + A + YL IHRD+ NIL+ N+ K+ADFGLSR +V
Sbjct: 140 SSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR--GQEVYVK 197
Query: 441 STAPQGTPGYVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
T + ++ E T SDV+S+GV+L E++S
Sbjct: 198 KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 108/205 (52%), Gaps = 14/205 (6%)
Query: 284 FSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNNYRRVEQ--FMNEVEILTRLRHKNL 340
+ + ++G+G +G V+ + +D G+ VA+K+ ++ V + + E+ +L +L+H NL
Sbjct: 5 YEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNL 64
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
V+L R + L LV+E+ + TV +L DR + G+ ++ +I +T A+ + H
Sbjct: 65 VNLLEVFRR-KRRLHLVFEY-CDHTVLHEL--DRYQRGVPEHLVK-SITWQTLQAVNFCH 119
Query: 401 ASDIIHRDVKTNNILLDSNFCVKVADFGLSRLF--PLDVTHVSTAPQGTPGYVDPEYHQC 458
+ IHRDVK NIL+ + +K+ DFG +RL P D A T Y PE
Sbjct: 120 KHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVA---TRWYRSPELLVG 176
Query: 459 -YQLTDKSDVYSFGVVLIELISSMP 482
Q DV++ G V EL+S +P
Sbjct: 177 DTQYGPPVDVWAIGCVFAELLSGVP 201
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 108/219 (49%), Gaps = 32/219 (14%)
Query: 288 KELGDGGFGTVYYG--------KLKDGREVAVKRLYDNNYRR-VEQFMNEVEILTRL-RH 337
K LG+G FG V K K+ VAVK L D+ + + ++E+E++ + +H
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHG------------DRAKHGLLTWPIR 385
KN+++L G ++ L ++ E+ + G + + L +R +T+
Sbjct: 101 KNIINLLGACTQ-DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 386 MNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQ 445
++ + A + YL + IHRD+ N+L+ N +++ADFGL+R D+ ++ +
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLAR----DINNIDYYKK 215
Query: 446 GTPG-----YVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
T G ++ PE T +SDV+SFGV++ E+ +
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 108/219 (49%), Gaps = 32/219 (14%)
Query: 288 KELGDGGFGTVYYG--------KLKDGREVAVKRLYDNNYRR-VEQFMNEVEILTRL-RH 337
K LG+G FG V K K+ VAVK L D+ + + ++E+E++ + +H
Sbjct: 30 KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 89
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHG------------DRAKHGLLTWPIR 385
KN+++L G ++ L ++ E+ + G + + L +R +T+
Sbjct: 90 KNIINLLGACTQ-DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 148
Query: 386 MNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQ 445
++ + A + YL + IHRD+ N+L+ N +K+ADFGL+R D+ ++ +
Sbjct: 149 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKK 204
Query: 446 GTPG-----YVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
T G ++ PE T +SDV+SFGV++ E+ +
Sbjct: 205 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 112/222 (50%), Gaps = 38/222 (17%)
Query: 288 KELGDGGFGTVYYG------KLKDGR--EVAVKRLY-DNNYRRVEQFMNEVEILTRL-RH 337
K LG+G FG V K K R +VAVK L D + + ++E+E++ + +H
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGL-------------LTWPI 384
KN+++L G ++ L ++ E+ + G + + L R GL L+
Sbjct: 94 KNIINLLGACTQ-DGPLYVIVEYASKGNLREYLQARRPP-GLEFSFNPSHNPEEQLSSKD 151
Query: 385 RMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAP 444
++ A + A + YL + IHRD+ N+L+ + +K+ADFGL+R D+ H+
Sbjct: 152 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDXXK 207
Query: 445 QGTPG-----YVDPE--YHQCYQLTDKSDVYSFGVVLIELIS 479
+ T G ++ PE + + Y T +SDV+SFGV+L E+ +
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIY--THQSDVWSFGVLLWEIFT 247
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 108/219 (49%), Gaps = 32/219 (14%)
Query: 288 KELGDGGFGTVYYG--------KLKDGREVAVKRLYDNNYRR-VEQFMNEVEILTRL-RH 337
K LG+G FG V K K+ VAVK L D+ + + ++E+E++ + +H
Sbjct: 28 KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 87
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHG------------DRAKHGLLTWPIR 385
KN+++L G ++ L ++ E+ + G + + L +R +T+
Sbjct: 88 KNIINLLGACTQ-DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 146
Query: 386 MNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQ 445
++ + A + YL + IHRD+ N+L+ N +K+ADFGL+R D+ ++ +
Sbjct: 147 VSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLAR----DINNIDYYKK 202
Query: 446 GTPG-----YVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
T G ++ PE T +SDV+SFGV++ E+ +
Sbjct: 203 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 100/212 (47%), Gaps = 19/212 (8%)
Query: 280 ATNDFSREKE-------LGDGGFGTVYYGKLKD----GREVAVKRLYDNNYRRV-EQFMN 327
+T D+ ++E +G+G FG V+ G VA+K + V E+F+
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 60
Query: 328 EVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMN 387
E + + H ++V L G + + ++ E G + L + L + +
Sbjct: 61 EALTMRQFDHPHIVKLIGVIT--ENPVWIIMELCTLGELRSFLQVRKYSLDLASLIL--- 115
Query: 388 IAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGT 447
A + ++ALAYL + +HRD+ N+L+ SN CVK+ DFGLSR D T+ +
Sbjct: 116 YAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKL 174
Query: 448 P-GYVDPEYHQCYQLTDKSDVYSFGVVLIELI 478
P ++ PE + T SDV+ FGV + E++
Sbjct: 175 PIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 100/212 (47%), Gaps = 19/212 (8%)
Query: 280 ATNDFSREKE-------LGDGGFGTVYYGKLKD----GREVAVKRLYDNNYRRV-EQFMN 327
+T D+ ++E +G+G FG V+ G VA+K + V E+F+
Sbjct: 3 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 62
Query: 328 EVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMN 387
E + + H ++V L G + + ++ E G + L + L + +
Sbjct: 63 EALTMRQFDHPHIVKLIGVIT--ENPVWIIMELCTLGELRSFLQVRKYSLDLASLIL--- 117
Query: 388 IAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGT 447
A + ++ALAYL + +HRD+ N+L+ SN CVK+ DFGLSR D T+ +
Sbjct: 118 YAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKL 176
Query: 448 P-GYVDPEYHQCYQLTDKSDVYSFGVVLIELI 478
P ++ PE + T SDV+ FGV + E++
Sbjct: 177 PIKWMAPESINFRRFTSASDVWMFGVCMWEIL 208
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 108/219 (49%), Gaps = 32/219 (14%)
Query: 288 KELGDGGFGTVYYG--------KLKDGREVAVKRLYDNNYRR-VEQFMNEVEILTRL-RH 337
K LG+G FG V K K+ VAVK L D+ + + ++E+E++ + +H
Sbjct: 33 KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 92
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHG------------DRAKHGLLTWPIR 385
KN+++L G ++ L ++ E+ + G + + L +R +T+
Sbjct: 93 KNIINLLGACTQ-DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 151
Query: 386 MNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQ 445
++ + A + YL + IHRD+ N+L+ N +K+ADFGL+R D+ ++ +
Sbjct: 152 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKK 207
Query: 446 GTPG-----YVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
T G ++ PE T +SDV+SFGV++ E+ +
Sbjct: 208 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 95/205 (46%), Gaps = 13/205 (6%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNN---YRRVEQFMNEVEILTRLRH 337
+ F R K LG G FG V K K+ G A+K L +++E +NE IL +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
LV L + + + L +V E+VA G + L + G + P A +
Sbjct: 101 PFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFE 155
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQ 457
YLH+ D+I+RD+K N+L+D ++V DFG ++ V + GTP Y+ PE
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLAGTPEYLAPEIIL 211
Query: 458 CYQLTDKSDVYSFGVVLIELISSMP 482
D ++ GV++ E+ + P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 100/212 (47%), Gaps = 19/212 (8%)
Query: 280 ATNDFSREKE-------LGDGGFGTVYYGKLKD----GREVAVKRLYDNNYRRV-EQFMN 327
+T D+ ++E +G+G FG V+ G VA+K + V E+F+
Sbjct: 4 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 63
Query: 328 EVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMN 387
E + + H ++V L G + + ++ E G + L + L + +
Sbjct: 64 EALTMRQFDHPHIVKLIGVIT--ENPVWIIMELCTLGELRSFLQVRKYSLDLASLIL--- 118
Query: 388 IAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGT 447
A + ++ALAYL + +HRD+ N+L+ SN CVK+ DFGLSR D T+ +
Sbjct: 119 YAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKL 177
Query: 448 P-GYVDPEYHQCYQLTDKSDVYSFGVVLIELI 478
P ++ PE + T SDV+ FGV + E++
Sbjct: 178 PIKWMAPESINFRRFTSASDVWMFGVCMWEIL 209
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 115/248 (46%), Gaps = 44/248 (17%)
Query: 272 FSYSDLAEATND----FSRE-----KELGDGGFGTVY----YGKLKDGR--EVAVKRLYD 316
+ Y D E D F RE K LG G FG V YG K G +VAVK L +
Sbjct: 26 YFYVDFREYEYDLKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKE 85
Query: 317 N-NYRRVEQFMNEVEILTRL-RHKNLVSLFG-CTSRYSQGLLLVYEFVANGTVADQLHGD 373
+ E M+E++++T+L H+N+V+L G CT S + L++E+ G + + L
Sbjct: 86 KADSSEREALMSELKMMTQLGSHENIVNLLGACT--LSGPIYLIFEYCCYGDLLNYLRSK 143
Query: 374 RAKHG-------------------LLTWPIRMNIAIETASALAYLHASDIIHRDVKTNNI 414
R K +LT+ + A + A + +L +HRD+ N+
Sbjct: 144 REKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNV 203
Query: 415 LLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP-GYVDPE--YHQCYQLTDKSDVYSFG 471
L+ VK+ DFGL+R D +V P ++ PE + Y T KSDV+S+G
Sbjct: 204 LVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIY--TIKSDVWSYG 261
Query: 472 VVLIELIS 479
++L E+ S
Sbjct: 262 ILLWEIFS 269
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 95/205 (46%), Gaps = 13/205 (6%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNN---YRRVEQFMNEVEILTRLRH 337
+ F R K LG G FG V K K+ G A+K L +++E +NE IL +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
LV L + + + L +V E+VA G + L + G + P A +
Sbjct: 101 PFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFE 155
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQ 457
YLH+ D+I+RD+K N+L+D ++V DFG ++ V + GTP Y+ PE
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLXGTPEYLAPEIIL 211
Query: 458 CYQLTDKSDVYSFGVVLIELISSMP 482
D ++ GV++ E+ + P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 99/212 (46%), Gaps = 19/212 (8%)
Query: 280 ATNDFSREKE-------LGDGGFGTVYYGKLKD----GREVAVKRLYDNNYRRV-EQFMN 327
+T D+ ++E +G+G FG V+ G VA+K + V E+F+
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 60
Query: 328 EVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMN 387
E + + H ++V L G + + ++ E G + L + L + +
Sbjct: 61 EALTMRQFDHPHIVKLIGVIT--ENPVWIIMELCTLGELRSFLQVRKFSLDLASLIL--- 115
Query: 388 IAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGT 447
A + ++ALAYL + +HRD+ N+L+ SN CVK+ DFGLSR D T +
Sbjct: 116 YAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTXXKASKGKL 174
Query: 448 P-GYVDPEYHQCYQLTDKSDVYSFGVVLIELI 478
P ++ PE + T SDV+ FGV + E++
Sbjct: 175 PIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 9/202 (4%)
Query: 284 FSREKELGDGGFGTVYYGKLKDGREVAVKRL-YDNNYRRV-EQFMNEVEILTRLRHKNLV 341
+ + +++G+G +G VY K GR VA+KR+ D + + E+ +L L H N+V
Sbjct: 23 YQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIV 82
Query: 342 SLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHA 401
SL + L LV+EF+ + D K GL I++ + + +A+ H
Sbjct: 83 SLIDVIHS-ERCLTLVFEFMEKDL---KKVLDENKTGLQDSQIKIYLY-QLLRGVAHCHQ 137
Query: 402 SDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQL 461
I+HRD+K N+L++S+ +K+ADFGL+R F + V T T Y P+ +
Sbjct: 138 HRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY-THEVVTLWYRAPDVLMGSKK 196
Query: 462 TDKS-DVYSFGVVLIELISSMP 482
S D++S G + E+I+ P
Sbjct: 197 YSTSVDIWSIGCIFAEMITGKP 218
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 95/205 (46%), Gaps = 13/205 (6%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNN---YRRVEQFMNEVEILTRLRH 337
+ F R K LG G FG V K K+ G A+K L +++E +NE IL +
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
LV L + + + L +V E+VA G + L + G + P A +
Sbjct: 122 PFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFE 176
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQ 457
YLH+ D+I+RD+K N+L+D ++V DFG ++ V + GTP Y+ PE
Sbjct: 177 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGATWTLCGTPEYLAPEIIL 232
Query: 458 CYQLTDKSDVYSFGVVLIELISSMP 482
D ++ GV++ E+ + P
Sbjct: 233 SKGYNKAVDWWALGVLIYEMAAGYP 257
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 100/212 (47%), Gaps = 19/212 (8%)
Query: 280 ATNDFSREKE-------LGDGGFGTVYYGKLKD----GREVAVKRLYDNNYRRV-EQFMN 327
+T D+ ++E +G+G FG V+ G VA+K + V E+F+
Sbjct: 381 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 440
Query: 328 EVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMN 387
E + + H ++V L G + + ++ E G + L + L + +
Sbjct: 441 EALTMRQFDHPHIVKLIGVIT--ENPVWIIMELCTLGELRSFLQVRKFSLDLASLIL--- 495
Query: 388 IAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGT 447
A + ++ALAYL + +HRD+ N+L+ SN CVK+ DFGLSR D T+ +
Sbjct: 496 YAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKL 554
Query: 448 P-GYVDPEYHQCYQLTDKSDVYSFGVVLIELI 478
P ++ PE + T SDV+ FGV + E++
Sbjct: 555 PIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 124/291 (42%), Gaps = 28/291 (9%)
Query: 275 SDLAEATNDFSREKELGDGGFGTVYYGKLKDGREVAVKRLYD--NNYRRVEQFMNEVEIL 332
+++A+ F++ + +G G FG V+ G ++V ++ D +E E+ +L
Sbjct: 16 NNIADPEELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVL 75
Query: 333 TRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIET 392
++ + +G + S+ L ++ E++ G+ D L + ++ E
Sbjct: 76 SQCDSSYVTKYYGSYLKGSK-LWIIMEYLGGGSALDLLRAGPFDEFQIATMLK-----EI 129
Query: 393 ASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVD 452
L YLH+ IHRD+K N+LL VK+ADFG++ D GTP ++
Sbjct: 130 LKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLT-DTQIKRNTFVGTPFWMA 188
Query: 453 PEYHQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHRHEINLANLAINKIQKCAFDELI 512
PE Q K+D++S G+ IEL P N H + + L I K
Sbjct: 189 PEVIQQSAYDSKADIWSLGITAIELAKGEPP---NSDMHPMRVLFL----IPKNN----- 236
Query: 513 DPCLGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLAELQRIKSGK 563
P L V T S E CL ++ RP+ +E+L +K+ K
Sbjct: 237 PPTL-------VGDFTKSFKEFIDACLNKDPSFRPTAKELLKHKFIVKNSK 280
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 102/202 (50%), Gaps = 9/202 (4%)
Query: 284 FSREKELGDGGFGTVYYGKLKDGREVAVKRL-YDNNYRRV-EQFMNEVEILTRLRHKNLV 341
+ + +++G+G +G VY K GR VA+KR+ D + + E+ +L L H N+V
Sbjct: 23 YQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIV 82
Query: 342 SLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHA 401
SL + L LV+EF+ + D K GL I++ + + +A+ H
Sbjct: 83 SLIDVIHS-ERCLTLVFEFMEKDL---KKVLDENKTGLQDSQIKIYLY-QLLRGVAHCHQ 137
Query: 402 SDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPE-YHQCYQ 460
I+HRD+K N+L++S+ +K+ADFGL+R F + V T T Y P+ +
Sbjct: 138 HRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY-THEVVTLWYRAPDVLMGSKK 196
Query: 461 LTDKSDVYSFGVVLIELISSMP 482
+ D++S G + E+I+ P
Sbjct: 197 YSTSVDIWSIGCIFAEMITGKP 218
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 97/212 (45%), Gaps = 20/212 (9%)
Query: 288 KELGDGGFGTVY----YG--KLKDGREVAVKRLYDN-NYRRVEQFMNEVEILTRL-RHKN 339
K LG G FG V +G K R VAVK L + + M+E++IL + H N
Sbjct: 34 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 93
Query: 340 LVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAK-----------HGLLTWPIRMNI 388
+V+L G ++ L+++ EF G ++ L R + LT +
Sbjct: 94 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICY 153
Query: 389 AIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP 448
+ + A + +L + IHRD+ NILL VK+ DFGL+R D V P
Sbjct: 154 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 449 -GYVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
++ PE T +SDV+SFGV+L E+ S
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 98/213 (46%), Gaps = 21/213 (9%)
Query: 288 KELGDGGFGTVY----YG--KLKDGREVAVKRLYDN-NYRRVEQFMNEVEILTRL-RHKN 339
K LG G FG V +G K R VAVK L + + M+E++IL + H N
Sbjct: 33 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 340 LVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAK------------HGLLTWPIRMN 387
+V+L G ++ L+++ EF G ++ L R + LT +
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 388 IAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGT 447
+ + A + +L + IHRD+ NILL VK+ DFGL+R D +V
Sbjct: 153 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 212
Query: 448 P-GYVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
P ++ PE T +SDV+SFGV+L E+ S
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 90/201 (44%), Gaps = 9/201 (4%)
Query: 284 FSREKELGDGGFGTVYYGKLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLV 341
F++ +G G FG VY G +EV ++ D +E E+ +L++ +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 342 SLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHA 401
FG + S L ++ E++ G+ D L K G L I E L YLH+
Sbjct: 81 RYFGSYLK-STKLWIIMEYLGGGSALDLL-----KPGPLEETYIATILREILKGLDYLHS 134
Query: 402 SDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQL 461
IHRD+K N+LL VK+ADFG++ D GTP ++ PE +
Sbjct: 135 ERKIHRDIKAANVLLSEQGDVKLADFGVAGQL-TDTQIKRNXFVGTPFWMAPEVIKQSAY 193
Query: 462 TDKSDVYSFGVVLIELISSMP 482
K+D++S G+ IEL P
Sbjct: 194 DFKADIWSLGITAIELAKGEP 214
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 98/213 (46%), Gaps = 21/213 (9%)
Query: 288 KELGDGGFGTVY----YG--KLKDGREVAVKRLYDN-NYRRVEQFMNEVEILTRL-RHKN 339
K LG G FG V +G K R VAVK L + + M+E++IL + H N
Sbjct: 35 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 94
Query: 340 LVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAK------------HGLLTWPIRMN 387
+V+L G ++ L+++ EF G ++ L R + LT +
Sbjct: 95 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLIC 154
Query: 388 IAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGT 447
+ + A + +L + IHRD+ NILL VK+ DFGL+R D +V
Sbjct: 155 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 214
Query: 448 P-GYVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
P ++ PE T +SDV+SFGV+L E+ S
Sbjct: 215 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 93/195 (47%), Gaps = 12/195 (6%)
Query: 290 LGDGGFGTVYYGKLKD----GREVAVKRLYDNNYRRV-EQFMNEVEILTRLRHKNLVSLF 344
+G+G FG V+ G VA+K + V E+F+ E + + H ++V L
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 345 GCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDI 404
G + + ++ E G + L + L + + A + ++ALAYL +
Sbjct: 75 GVIT--ENPVWIIMELCTLGELRSFLQVRKYSLDLASLIL---YAYQLSTALAYLESKRF 129
Query: 405 IHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP-GYVDPEYHQCYQLTD 463
+HRD+ N+L+ SN CVK+ DFGLSR D T+ + P ++ PE + T
Sbjct: 130 VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFRRFTS 188
Query: 464 KSDVYSFGVVLIELI 478
SDV+ FGV + E++
Sbjct: 189 ASDVWMFGVCMWEIL 203
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 109/220 (49%), Gaps = 34/220 (15%)
Query: 288 KELGDGGFGTVYYG------KLKDGR--EVAVKRLY-DNNYRRVEQFMNEVEILTRL-RH 337
K LG+G FG V K K R +VAVK L D + + ++E+E++ + +H
Sbjct: 19 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 78
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGL-------------LTWPI 384
KN+++L G ++ L ++ E+ + G + + L R GL L+
Sbjct: 79 KNIINLLGACTQ-DGPLYVIVEYASKGNLREYLQARRPP-GLEYCYNPSHNPEEQLSSKD 136
Query: 385 RMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAP 444
++ A + A + YL + IHRD+ N+L+ + +K+ADFGL+R D+ H+
Sbjct: 137 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYK 192
Query: 445 QGTPG-----YVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
+ T G ++ PE T +SDV+SFGV+L E+ +
Sbjct: 193 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 107/219 (48%), Gaps = 32/219 (14%)
Query: 288 KELGDGGFGTVYYG--------KLKDGREVAVKRLYDNNYRR-VEQFMNEVEILTRL-RH 337
K LG+G FG V K K+ VAVK L D+ + + ++E+E++ + +H
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHG------------DRAKHGLLTWPIR 385
KN+++L G ++ L ++ + + G + + L +R +T+
Sbjct: 101 KNIINLLGACTQ-DGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 386 MNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQ 445
++ + A + YL + IHRD+ N+L+ N +K+ADFGL+R D+ ++ +
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKK 215
Query: 446 GTPG-----YVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
T G ++ PE T +SDV+SFGV++ E+ +
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 98/213 (46%), Gaps = 21/213 (9%)
Query: 288 KELGDGGFGTVY----YG--KLKDGREVAVKRLYDN-NYRRVEQFMNEVEILTRL-RHKN 339
K LG G FG V +G K R VAVK L + + M+E++IL + H N
Sbjct: 24 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 83
Query: 340 LVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAK------------HGLLTWPIRMN 387
+V+L G ++ L+++ EF G ++ L R + LT +
Sbjct: 84 VVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 388 IAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGT 447
+ + A + +L + IHRD+ NILL VK+ DFGL+R D +V
Sbjct: 144 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 203
Query: 448 P-GYVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
P ++ PE T +SDV+SFGV+L E+ S
Sbjct: 204 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 97/213 (45%), Gaps = 21/213 (9%)
Query: 288 KELGDGGFGTVY----YG--KLKDGREVAVKRLYDN-NYRRVEQFMNEVEILTRL-RHKN 339
K LG G FG V +G K R VAVK L + + M+E++IL + H N
Sbjct: 33 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 340 LVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAK------------HGLLTWPIRMN 387
+V+L G ++ L+++ EF G ++ L R + LT +
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 388 IAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGT 447
+ + A + +L + IHRD+ NILL VK+ DFGL+R D V
Sbjct: 153 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 448 P-GYVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
P ++ PE T +SDV+SFGV+L E+ S
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 103/211 (48%), Gaps = 21/211 (9%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKDGREV--AVKRLYDN---NYRRVEQFMNEVEILTR-L 335
+DF K +G G FG V + K EV AVK L + + M+E +L + +
Sbjct: 38 SDFHFLKVIGKGSFGKVLLARHK-AEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNV 96
Query: 336 RHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASA 395
+H LV L + + + L V +++ G + L +R P A E ASA
Sbjct: 97 KHPFLVGLH-FSFQTADKLYFVLDYINGGELFYHLQRERC----FLEPRARFYAAEIASA 151
Query: 396 LAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQ--GTPGYVDP 453
L YLH+ +I++RD+K NILLDS + + DFGL + ++ H ST GTP Y+ P
Sbjct: 152 LGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCK---ENIEHNSTTSTFCGTPEYLAP 208
Query: 454 E--YHQCYQLTDKSDVYSFGVVLIELISSMP 482
E + Q Y T D + G VL E++ +P
Sbjct: 209 EVLHKQPYDRT--VDWWCLGAVLYEMLYGLP 237
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 112/222 (50%), Gaps = 38/222 (17%)
Query: 288 KELGDGGFGTVYYG------KLKDGR--EVAVKRLY-DNNYRRVEQFMNEVEILTRL-RH 337
K LG+G FG V K K R +VAVK L D + + ++E+E++ + +H
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGL-------------LTWPI 384
KN+++L G ++ L ++ E+ + G + + L R GL L+
Sbjct: 94 KNIINLLGACTQ-DGPLYVIVEYASKGNLREYLQARRPP-GLEYCYNPSHNPEEQLSSKD 151
Query: 385 RMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAP 444
++ A + A + YL + IHRD+ N+L+ + +K+ADFGL+R D+ H+
Sbjct: 152 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYK 207
Query: 445 QGTPG-----YVDPE--YHQCYQLTDKSDVYSFGVVLIELIS 479
+ T G ++ PE + + Y T +SDV+SFGV+L E+ +
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIY--THQSDVWSFGVLLWEIFT 247
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 112/222 (50%), Gaps = 38/222 (17%)
Query: 288 KELGDGGFGTVYYG------KLKDGR--EVAVKRLY-DNNYRRVEQFMNEVEILTRL-RH 337
K LG+G FG V K K R +VAVK L D + + ++E+E++ + +H
Sbjct: 27 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 86
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGL-------------LTWPI 384
KN+++L G ++ L ++ E+ + G + + L R GL L+
Sbjct: 87 KNIINLLGACTQ-DGPLYVIVEYASKGNLREYLQARRPP-GLEYSYNPSHNPEEQLSSKD 144
Query: 385 RMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAP 444
++ A + A + YL + IHRD+ N+L+ + +K+ADFGL+R D+ H+
Sbjct: 145 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYK 200
Query: 445 QGTPG-----YVDPE--YHQCYQLTDKSDVYSFGVVLIELIS 479
+ T G ++ PE + + Y T +SDV+SFGV+L E+ +
Sbjct: 201 KTTNGRLPVKWMAPEALFDRIY--THQSDVWSFGVLLWEIFT 240
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 112/222 (50%), Gaps = 38/222 (17%)
Query: 288 KELGDGGFGTVYYG------KLKDGR--EVAVKRLY-DNNYRRVEQFMNEVEILTRL-RH 337
K LG+G FG V K K R +VAVK L D + + ++E+E++ + +H
Sbjct: 23 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 82
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGL-------------LTWPI 384
KN+++L G ++ L ++ E+ + G + + L R GL L+
Sbjct: 83 KNIINLLGACTQ-DGPLYVIVEYASKGNLREYLQARRPP-GLEYSYNPSHNPEEQLSSKD 140
Query: 385 RMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAP 444
++ A + A + YL + IHRD+ N+L+ + +K+ADFGL+R D+ H+
Sbjct: 141 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYK 196
Query: 445 QGTPG-----YVDPE--YHQCYQLTDKSDVYSFGVVLIELIS 479
+ T G ++ PE + + Y T +SDV+SFGV+L E+ +
Sbjct: 197 KTTNGRLPVKWMAPEALFDRIY--THQSDVWSFGVLLWEIFT 236
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 97/200 (48%), Gaps = 16/200 (8%)
Query: 290 LGDGGFGTVYYGKLKDGRE-VAVKRLYDNNYRRVEQFM-NEVEILTRLRHKNLVSLFGCT 347
LG G F V + K ++ VA+K + E M NE+ +L +++H N+V+L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVAL---D 82
Query: 348 SRYSQG--LLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDII 405
Y G L L+ + V+ G + D++ + G T + + A+ YLH I+
Sbjct: 83 DIYESGGHLYLIMQLVSGGELFDRI----VEKGFYTERDASRLIFQVLDAVKYLHDLGIV 138
Query: 406 HRDVKTNNIL---LDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQLT 462
HRD+K N+L LD + + ++DFGLS++ D V + GTPGYV PE +
Sbjct: 139 HRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPEVLAQKPYS 196
Query: 463 DKSDVYSFGVVLIELISSMP 482
D +S GV+ L+ P
Sbjct: 197 KAVDCWSIGVIAYILLCGYP 216
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 98/213 (46%), Gaps = 21/213 (9%)
Query: 288 KELGDGGFGTVY----YG--KLKDGREVAVKRLYDN-NYRRVEQFMNEVEILTRL-RHKN 339
K LG G FG V +G K R VAVK L + + M+E++IL + H N
Sbjct: 70 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 129
Query: 340 LVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAK------------HGLLTWPIRMN 387
+V+L G ++ L+++ EF G ++ L R + LT +
Sbjct: 130 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 189
Query: 388 IAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGT 447
+ + A + +L + IHRD+ NILL VK+ DFGL+R D +V
Sbjct: 190 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 249
Query: 448 P-GYVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
P ++ PE T +SDV+SFGV+L E+ S
Sbjct: 250 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 112/222 (50%), Gaps = 38/222 (17%)
Query: 288 KELGDGGFGTVYYG------KLKDGR--EVAVKRLY-DNNYRRVEQFMNEVEILTRL-RH 337
K LG+G FG V K K R +VAVK L D + + ++E+E++ + +H
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGL-------------LTWPI 384
KN+++L G ++ L ++ E+ + G + + L R GL L+
Sbjct: 94 KNIINLLGACTQ-DGPLYVIVEYASKGNLREYLQARRPP-GLEYSYNPSHNPEEQLSSKD 151
Query: 385 RMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAP 444
++ A + A + YL + IHRD+ N+L+ + +K+ADFGL+R D+ H+
Sbjct: 152 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYK 207
Query: 445 QGTPG-----YVDPE--YHQCYQLTDKSDVYSFGVVLIELIS 479
+ T G ++ PE + + Y T +SDV+SFGV+L E+ +
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIY--THQSDVWSFGVLLWEIFT 247
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 98/213 (46%), Gaps = 21/213 (9%)
Query: 288 KELGDGGFGTVY----YG--KLKDGREVAVKRLYDN-NYRRVEQFMNEVEILTRL-RHKN 339
K LG G FG V +G K R VAVK L + + M+E++IL + H N
Sbjct: 24 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 83
Query: 340 LVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAK------------HGLLTWPIRMN 387
+V+L G ++ L+++ EF G ++ L R + LT +
Sbjct: 84 VVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 388 IAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGT 447
+ + A + +L + IHRD+ NILL VK+ DFGL+R D +V
Sbjct: 144 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 203
Query: 448 P-GYVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
P ++ PE T +SDV+SFGV+L E+ S
Sbjct: 204 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 107/219 (48%), Gaps = 32/219 (14%)
Query: 288 KELGDGGFGTVYYG--------KLKDGREVAVKRLYDNNYRR-VEQFMNEVEILTRL-RH 337
K LG+G FG V K K+ VAVK L D+ + + ++E+E++ + +H
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHG------------DRAKHGLLTWPIR 385
KN+++L G ++ L ++ + + G + + L +R +T+
Sbjct: 101 KNIINLLGACTQ-DGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 386 MNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQ 445
++ + A + YL + IHRD+ N+L+ N +K+ADFGL+R D+ ++ +
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKK 215
Query: 446 GTPG-----YVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
T G ++ PE T +SDV+SFGV++ E+ +
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 112/222 (50%), Gaps = 38/222 (17%)
Query: 288 KELGDGGFGTVYYG------KLKDGR--EVAVKRLY-DNNYRRVEQFMNEVEILTRL-RH 337
K LG+G FG V K K R +VAVK L D + + ++E+E++ + +H
Sbjct: 26 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 85
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGL-------------LTWPI 384
KN+++L G ++ L ++ E+ + G + + L R GL L+
Sbjct: 86 KNIINLLGACTQ-DGPLYVIVEYASKGNLREYLQARRPP-GLEYSYNPSHNPEEQLSSKD 143
Query: 385 RMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAP 444
++ A + A + YL + IHRD+ N+L+ + +K+ADFGL+R D+ H+
Sbjct: 144 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYK 199
Query: 445 QGTPG-----YVDPE--YHQCYQLTDKSDVYSFGVVLIELIS 479
+ T G ++ PE + + Y T +SDV+SFGV+L E+ +
Sbjct: 200 KTTNGRLPVKWMAPEALFDRIY--THQSDVWSFGVLLWEIFT 239
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 97/200 (48%), Gaps = 16/200 (8%)
Query: 290 LGDGGFGTVYYGKLKDGRE-VAVKRLYDNNYRRVEQFM-NEVEILTRLRHKNLVSLFGCT 347
LG G F V + K ++ VA+K + E M NE+ +L +++H N+V+L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVAL---D 82
Query: 348 SRYSQG--LLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDII 405
Y G L L+ + V+ G + D++ + G T + + A+ YLH I+
Sbjct: 83 DIYESGGHLYLIMQLVSGGELFDRI----VEKGFYTERDASRLIFQVLDAVKYLHDLGIV 138
Query: 406 HRDVKTNNIL---LDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQLT 462
HRD+K N+L LD + + ++DFGLS++ D V + GTPGYV PE +
Sbjct: 139 HRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPEVLAQKPYS 196
Query: 463 DKSDVYSFGVVLIELISSMP 482
D +S GV+ L+ P
Sbjct: 197 KAVDCWSIGVIAYILLCGYP 216
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 97/200 (48%), Gaps = 16/200 (8%)
Query: 290 LGDGGFGTVYYGKLKDGRE-VAVKRLYDNNYRRVEQFM-NEVEILTRLRHKNLVSLFGCT 347
LG G F V + K ++ VA+K + E M NE+ +L +++H N+V+L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVAL---D 82
Query: 348 SRYSQG--LLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDII 405
Y G L L+ + V+ G + D++ + G T + + A+ YLH I+
Sbjct: 83 DIYESGGHLYLIMQLVSGGELFDRI----VEKGFYTERDASRLIFQVLDAVKYLHDLGIV 138
Query: 406 HRDVKTNNIL---LDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQLT 462
HRD+K N+L LD + + ++DFGLS++ D V + GTPGYV PE +
Sbjct: 139 HRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPEVLAQKPYS 196
Query: 463 DKSDVYSFGVVLIELISSMP 482
D +S GV+ L+ P
Sbjct: 197 KAVDCWSIGVIAYILLCGYP 216
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 95/205 (46%), Gaps = 13/205 (6%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNN---YRRVEQFMNEVEILTRLRH 337
+ F R K LG G FG V K K+ G A+K L +++E +NE IL +
Sbjct: 42 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
LV L + + + L +V E+VA G + L + G + P A +
Sbjct: 102 PFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFE 156
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQ 457
YLH+ D+I+RD+K N+L+D ++V DFG ++ V + GTP Y+ PE
Sbjct: 157 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIL 212
Query: 458 CYQLTDKSDVYSFGVVLIELISSMP 482
D ++ GV++ E+ + P
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 95/205 (46%), Gaps = 13/205 (6%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNN---YRRVEQFMNEVEILTRLRH 337
+ F R K LG G FG V K K+ G A+K L +++E +NE IL +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
LV L + + + L +V E+VA G + L + G + P A +
Sbjct: 101 PFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFE 155
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQ 457
YLH+ D+I+RD+K N+L+D ++V DFG ++ V + GTP Y+ PE
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIL 211
Query: 458 CYQLTDKSDVYSFGVVLIELISSMP 482
D ++ GV++ E+ + P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 95/205 (46%), Gaps = 13/205 (6%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNN---YRRVEQFMNEVEILTRLRH 337
+ F R K LG G FG V K K+ G A+K L +++E +NE IL +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
LV L + + + L +V E+VA G + L + G + P A +
Sbjct: 101 PFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFE 155
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQ 457
YLH+ D+I+RD+K N+L+D ++V DFG ++ V + GTP Y+ PE
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIL 211
Query: 458 CYQLTDKSDVYSFGVVLIELISSMP 482
D ++ GV++ E+ + P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 95/194 (48%), Gaps = 12/194 (6%)
Query: 290 LGDGGFGTVYYGKLK-DGREVAVKRLYDNNYRRVE---QFMNEVEILTRLRHKNLVSLFG 345
LG G FG V GK + G +VAVK L R ++ + E++ L RH +++ L+
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQ 83
Query: 346 CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDII 405
S S + +V E+V+ G + D + K+G L + + S + Y H ++
Sbjct: 84 VISTPSD-IFMVMEYVSGGELFDYI----CKNGRLDEKESRRLFQQILSGVDYCHRHMVV 138
Query: 406 HRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQLTD-K 464
HRD+K N+LLD++ K+ADFGLS + + G+P Y PE +
Sbjct: 139 HRDLKPENVLLDAHMNAKIADFGLSNM--MSDGEFLRXSCGSPNYAAPEVISGRLYAGPE 196
Query: 465 SDVYSFGVVLIELI 478
D++S GV+L L+
Sbjct: 197 VDIWSSGVILYALL 210
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 112/222 (50%), Gaps = 38/222 (17%)
Query: 288 KELGDGGFGTVYYG------KLKDGR--EVAVKRLY-DNNYRRVEQFMNEVEILTRL-RH 337
K LG+G FG V K K R +VAVK L D + + ++E+E++ + +H
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGL-------------LTWPI 384
KN+++L G ++ L ++ E+ + G + + L R GL L+
Sbjct: 94 KNIINLLGACTQ-DGPLYVIVEYASKGNLREYLQA-REPPGLEYSYNPSHNPEEQLSSKD 151
Query: 385 RMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAP 444
++ A + A + YL + IHRD+ N+L+ + +K+ADFGL+R D+ H+
Sbjct: 152 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYK 207
Query: 445 QGTPG-----YVDPE--YHQCYQLTDKSDVYSFGVVLIELIS 479
+ T G ++ PE + + Y T +SDV+SFGV+L E+ +
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIY--THQSDVWSFGVLLWEIFT 247
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 106/219 (48%), Gaps = 28/219 (12%)
Query: 282 NDFSREKELGDGGFGTVYYGKLK-DG--REVAVKRLYD----NNYRRVEQFMNEVEILTR 334
ND + +G+G FG V ++K DG + A+KR+ + +++R F E+E+L +
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHR---DFAGELEVLCK 78
Query: 335 L-RHKNLVSLFG-CTSRYSQGLLLVYEFVANGTVADQLHGDR------------AKHGLL 380
L H N+++L G C R L L E+ +G + D L R + L
Sbjct: 79 LGHHPNIINLLGACEHR--GYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTL 136
Query: 381 TWPIRMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHV 440
+ ++ A + A + YL IHR++ NIL+ N+ K+ADFGLSR +V
Sbjct: 137 SSQQLLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSR--GQEVYVK 194
Query: 441 STAPQGTPGYVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
T + ++ E T SDV+S+GV+L E++S
Sbjct: 195 KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 95/205 (46%), Gaps = 13/205 (6%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNN---YRRVEQFMNEVEILTRLRH 337
+ F R K LG G FG V K K+ G A+K L +++E +NE IL +
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 87
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
LV L + + + L +V E+VA G + L + G + P A +
Sbjct: 88 PFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFE 142
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQ 457
YLH+ D+I+RD+K N+L+D ++V DFG ++ V + GTP Y+ PE
Sbjct: 143 YLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIL 198
Query: 458 CYQLTDKSDVYSFGVVLIELISSMP 482
D ++ GV++ E+ + P
Sbjct: 199 SKGYNKAVDWWALGVLIYEMAAGYP 223
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 95/205 (46%), Gaps = 13/205 (6%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNN---YRRVEQFMNEVEILTRLRH 337
+ F R K LG G FG V K K+ G A+K L +++E +NE IL +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
LV L + + + L +V E+VA G + L + G + P A +
Sbjct: 101 PFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFE 155
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQ 457
YLH+ D+I+RD+K N+L+D ++V DFG ++ V + GTP Y+ PE
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIL 211
Query: 458 CYQLTDKSDVYSFGVVLIELISSMP 482
D ++ GV++ E+ + P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 97/200 (48%), Gaps = 16/200 (8%)
Query: 290 LGDGGFGTVYYGKLKDGRE-VAVKRLYDNNYRRVEQFM-NEVEILTRLRHKNLVSLFGCT 347
LG G F V + K ++ VA+K + E M NE+ +L +++H N+V+L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVAL---D 82
Query: 348 SRYSQG--LLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDII 405
Y G L L+ + V+ G + D++ + G T + + A+ YLH I+
Sbjct: 83 DIYESGGHLYLIMQLVSGGELFDRI----VEKGFYTERDASRLIFQVLDAVKYLHDLGIV 138
Query: 406 HRDVKTNNIL---LDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQLT 462
HRD+K N+L LD + + ++DFGLS++ D V + GTPGYV PE +
Sbjct: 139 HRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPEVLAQKPYS 196
Query: 463 DKSDVYSFGVVLIELISSMP 482
D +S GV+ L+ P
Sbjct: 197 KAVDCWSIGVIAYILLCGYP 216
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 97/200 (48%), Gaps = 17/200 (8%)
Query: 289 ELGDGGFGTV---YYGKLKDGREVAVKRLYDNNYRR-VEQFMNEVEILTRLRHKNLVSLF 344
ELG G FG+V Y K +VA+K L + E+ M E +I+ +L + +V L
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 76
Query: 345 GCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAI---ETASALAYLHA 401
G ++ L+LV E G + L G R + P+ N+A + + + YL
Sbjct: 77 GVCQ--AEALMLVMEMAGGGPLHKFLVGKREEI-----PVS-NVAELLHQVSMGMKYLEE 128
Query: 402 SDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP--GYVDPEYHQCY 459
+ +HRD+ N+LL + K++DFGLS+ D ++ + G + PE
Sbjct: 129 KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFR 188
Query: 460 QLTDKSDVYSFGVVLIELIS 479
+ + +SDV+S+GV + E +S
Sbjct: 189 KFSSRSDVWSYGVTMWEALS 208
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 95/205 (46%), Gaps = 13/205 (6%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNN---YRRVEQFMNEVEILTRLRH 337
+ F R K LG G FG V K K+ G A+K L +++E +NE IL +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
LV L + + + L +V E+VA G + L + G + P A +
Sbjct: 101 PFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFE 155
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQ 457
YLH+ D+I+RD+K N+L+D ++V DFG ++ V + GTP Y+ PE
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIL 211
Query: 458 CYQLTDKSDVYSFGVVLIELISSMP 482
D ++ GV++ E+ + P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 95/205 (46%), Gaps = 13/205 (6%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNN---YRRVEQFMNEVEILTRLRH 337
+ F R K LG G FG V K K+ G A+K L +++E +NE IL +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
LV L + + + L +V E+VA G + L + G + P A +
Sbjct: 101 PFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFE 155
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQ 457
YLH+ D+I+RD+K N+L+D ++V DFG ++ V + GTP Y+ PE
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIL 211
Query: 458 CYQLTDKSDVYSFGVVLIELISSMP 482
D ++ GV++ E+ + P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 97/213 (45%), Gaps = 21/213 (9%)
Query: 288 KELGDGGFGTVY----YG--KLKDGREVAVKRLYDN-NYRRVEQFMNEVEILTRL-RHKN 339
K LG G FG V +G K R VAVK L + + M+E++IL + H N
Sbjct: 24 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 83
Query: 340 LVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAK------------HGLLTWPIRMN 387
+V+L G ++ L+++ EF G ++ L R + LT +
Sbjct: 84 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 388 IAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGT 447
+ + A + +L + IHRD+ NILL VK+ DFGL+R D V
Sbjct: 144 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 203
Query: 448 P-GYVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
P ++ PE T +SDV+SFGV+L E+ S
Sbjct: 204 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 122/272 (44%), Gaps = 53/272 (19%)
Query: 284 FSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNNYRRVEQFMN-EVEILTRLRHKNLV 341
++ K +G+G FG VY KL D G VA+K++ + F N E++I+ +L H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQG-----KAFKNRELQIMRKLDHCNIV 76
Query: 342 SLFGCTSRYSQG-------LLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETAS 394
L YS G L LV ++V H RAK L +++ + +
Sbjct: 77 RLRYFF--YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFR 133
Query: 395 ALAYLHASDIIHRDVKTNNILLDSNFCV-KVADFGLSRLFPLDVTHVSTAPQGTPGYVDP 453
+LAY+H+ I HRD+K N+LLD + V K+ DFG ++ +VS Y+
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--------YICS 185
Query: 454 EYHQCYQL-------TDKSDVYSFGVVLIELISSMPAVDMNRHRHEINLANLAINKIQKC 506
Y++ +L T DV+S G VL EL+ P +
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD------------------S 227
Query: 507 AFDELID--PCLGFESDEEVKRMTTSVAELAF 536
D+L++ LG + E+++ M + E AF
Sbjct: 228 GVDQLVEIIKVLGTPTREQIREMNPNYTEFAF 259
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 112/222 (50%), Gaps = 38/222 (17%)
Query: 288 KELGDGGFGTVYYG------KLKDGR--EVAVKRLY-DNNYRRVEQFMNEVEILTRL-RH 337
K LG+G FG V K K R +VAVK L D + + ++E+E++ + +H
Sbjct: 75 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 134
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGL-------------LTWPI 384
KN+++L G ++ L ++ E+ + G + + L R GL L+
Sbjct: 135 KNIINLLGACTQ-DGPLYVIVEYASKGNLREYLQARRPP-GLEYSYNPSHNPEEQLSSKD 192
Query: 385 RMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAP 444
++ A + A + YL + IHRD+ N+L+ + +K+ADFGL+R D+ H+
Sbjct: 193 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYK 248
Query: 445 QGTPG-----YVDPE--YHQCYQLTDKSDVYSFGVVLIELIS 479
+ T G ++ PE + + Y T +SDV+SFGV+L E+ +
Sbjct: 249 KTTNGRLPVKWMAPEALFDRIY--THQSDVWSFGVLLWEIFT 288
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 97/213 (45%), Gaps = 21/213 (9%)
Query: 288 KELGDGGFGTVY----YG--KLKDGREVAVKRLYDN-NYRRVEQFMNEVEILTRL-RHKN 339
K LG G FG V +G K R VAVK L + + M+E++IL + H N
Sbjct: 24 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 83
Query: 340 LVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAK------------HGLLTWPIRMN 387
+V+L G ++ L+++ EF G ++ L R + LT +
Sbjct: 84 VVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 388 IAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGT 447
+ + A + +L + IHRD+ NILL VK+ DFGL+R D V
Sbjct: 144 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 203
Query: 448 P-GYVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
P ++ PE T +SDV+SFGV+L E+ S
Sbjct: 204 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 97/213 (45%), Gaps = 21/213 (9%)
Query: 288 KELGDGGFGTVY----YG--KLKDGREVAVKRLYDN-NYRRVEQFMNEVEILTRL-RHKN 339
K LG G FG V +G K R VAVK L + + M+E++IL + H N
Sbjct: 33 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 340 LVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAK------------HGLLTWPIRMN 387
+V+L G ++ L+++ EF G ++ L R + LT +
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 388 IAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGT 447
+ + A + +L + IHRD+ NILL VK+ DFGL+R D V
Sbjct: 153 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARL 212
Query: 448 P-GYVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
P ++ PE T +SDV+SFGV+L E+ S
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 123/272 (45%), Gaps = 53/272 (19%)
Query: 284 FSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNNYRRVEQFMN-EVEILTRLRHKNLV 341
++ K +G+G FG VY KL D G VA+K++ + ++F N E++I+ +L H N+V
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 110
Query: 342 SLFGCTSRYSQG-------LLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETAS 394
L YS G L LV ++V H RAK L +++ + +
Sbjct: 111 RLRYFF--YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFR 167
Query: 395 ALAYLHASDIIHRDVKTNNILLDSNFCV-KVADFGLSRLFPLDVTHVSTAPQGTPGYVDP 453
+LAY+H+ I HRD+K N+LLD + V K+ DFG ++ +VS Y+
Sbjct: 168 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--------YICS 219
Query: 454 EYHQCYQL-------TDKSDVYSFGVVLIELISSMPAVDMNRHRHEINLANLAINKIQKC 506
Y++ +L T DV+S G VL EL+ P +
Sbjct: 220 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD------------------S 261
Query: 507 AFDELID--PCLGFESDEEVKRMTTSVAELAF 536
D+L++ LG + E+++ M + E F
Sbjct: 262 GVDQLVEIIKVLGTPTREQIREMNPNYTEFKF 293
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 123/272 (45%), Gaps = 53/272 (19%)
Query: 284 FSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNNYRRVEQFMN-EVEILTRLRHKNLV 341
++ K +G+G FG VY KL D G VA+K++ + ++F N E++I+ +L H N+V
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 104
Query: 342 SLFGCTSRYSQG-------LLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETAS 394
L YS G L LV ++V H RAK L +++ + +
Sbjct: 105 RLRYFF--YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFR 161
Query: 395 ALAYLHASDIIHRDVKTNNILLDSNFCV-KVADFGLSRLFPLDVTHVSTAPQGTPGYVDP 453
+LAY+H+ I HRD+K N+LLD + V K+ DFG ++ +VS Y+
Sbjct: 162 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--------YICS 213
Query: 454 EYHQCYQL-------TDKSDVYSFGVVLIELISSMPAVDMNRHRHEINLANLAINKIQKC 506
Y++ +L T DV+S G VL EL+ P +
Sbjct: 214 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD------------------S 255
Query: 507 AFDELID--PCLGFESDEEVKRMTTSVAELAF 536
D+L++ LG + E+++ M + E F
Sbjct: 256 GVDQLVEIIKVLGTPTREQIREMNPNYTEFKF 287
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 104/230 (45%), Gaps = 28/230 (12%)
Query: 283 DFSREKELGDGGFGTVYYGKLKDGREV----AVKR---LYDNNYRRVEQFMNEVEILT-R 334
DF K LG G FG V+ + K + A+K+ L D++ VE M E +L+
Sbjct: 19 DFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDD---VECTMVEKRVLSLA 75
Query: 335 LRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHG----DRAKHGLLTWPIRMNIAI 390
H L +F CT + + L V E++ G + + D ++ A
Sbjct: 76 WEHPFLTHMF-CTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATF--------YAA 126
Query: 391 ETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGY 450
E L +LH+ I++RD+K +NILLD + +K+ADFG+ + L + GTP Y
Sbjct: 127 EIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFC-GTPDY 185
Query: 451 VDPEYHQCYQLTDKSDVYSFGVVLIELI---SSMPAVDMNRHRHEINLAN 497
+ PE + D +SFGV+L E++ S D H I + N
Sbjct: 186 IAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDN 235
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 123/272 (45%), Gaps = 53/272 (19%)
Query: 284 FSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNNYRRVEQFMN-EVEILTRLRHKNLV 341
++ K +G+G FG VY KL D G VA+K++ + ++F N E++I+ +L H N+V
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 112
Query: 342 SLFGCTSRYSQG-------LLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETAS 394
L YS G L LV ++V H RAK L +++ + +
Sbjct: 113 RLRYFF--YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFR 169
Query: 395 ALAYLHASDIIHRDVKTNNILLDSNFCV-KVADFGLSRLFPLDVTHVSTAPQGTPGYVDP 453
+LAY+H+ I HRD+K N+LLD + V K+ DFG ++ +VS Y+
Sbjct: 170 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--------YICS 221
Query: 454 EYHQCYQL-------TDKSDVYSFGVVLIELISSMPAVDMNRHRHEINLANLAINKIQKC 506
Y++ +L T DV+S G VL EL+ P +
Sbjct: 222 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD------------------S 263
Query: 507 AFDELID--PCLGFESDEEVKRMTTSVAELAF 536
D+L++ LG + E+++ M + E F
Sbjct: 264 GVDQLVEIIKVLGTPTREQIREMNPNYTEFKF 295
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 123/272 (45%), Gaps = 53/272 (19%)
Query: 284 FSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNNYRRVEQFMN-EVEILTRLRHKNLV 341
++ K +G+G FG VY KL D G VA+K++ + ++F N E++I+ +L H N+V
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 114
Query: 342 SLFGCTSRYSQG-------LLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETAS 394
L YS G L LV ++V H RAK L +++ + +
Sbjct: 115 RLRYFF--YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFR 171
Query: 395 ALAYLHASDIIHRDVKTNNILLDSNFCV-KVADFGLSRLFPLDVTHVSTAPQGTPGYVDP 453
+LAY+H+ I HRD+K N+LLD + V K+ DFG ++ +VS Y+
Sbjct: 172 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--------YICS 223
Query: 454 EYHQCYQL-------TDKSDVYSFGVVLIELISSMPAVDMNRHRHEINLANLAINKIQKC 506
Y++ +L T DV+S G VL EL+ P +
Sbjct: 224 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD------------------S 265
Query: 507 AFDELID--PCLGFESDEEVKRMTTSVAELAF 536
D+L++ LG + E+++ M + E F
Sbjct: 266 GVDQLVEIIKVLGTPTREQIREMNPNYTEFKF 297
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 95/205 (46%), Gaps = 13/205 (6%)
Query: 282 NDFSREKELGDGGFGTVYYGK-LKDGREVAVKRLYDNN---YRRVEQFMNEVEILTRLRH 337
+ F R K +G G FG V K ++ G A+K L +++E +NE IL +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
LV L + + + L +V E+V G + L + G + P A +
Sbjct: 101 PFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFE 155
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQ 457
YLH+ D+I+RD+K N+L+D +KVADFG ++ V + GTP Y+ PE
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAK----RVKGRTWXLCGTPEYLAPEIIL 211
Query: 458 CYQLTDKSDVYSFGVVLIELISSMP 482
D ++ GV++ E+ + P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 94/205 (45%), Gaps = 13/205 (6%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNN---YRRVEQFMNEVEILTRLRH 337
+ F R K LG G FG V K K+ G A+K L +++E +NE IL +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
LV L + + + L +V E+VA G + L + G P A +
Sbjct: 101 PFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFXEPHARFYAAQIVLTFE 155
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQ 457
YLH+ D+I+RD+K N+L+D ++V DFG ++ V + GTP Y+ PE
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIL 211
Query: 458 CYQLTDKSDVYSFGVVLIELISSMP 482
D ++ GV++ E+ + P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 95/205 (46%), Gaps = 13/205 (6%)
Query: 282 NDFSREKELGDGGFGTVYYGK-LKDGREVAVKRLYDNN---YRRVEQFMNEVEILTRLRH 337
+ F R K LG G FG V K ++ G A+K L +++E +NE IL +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
LV L + + + L +V E+VA G + L + G + P A +
Sbjct: 101 PFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFE 155
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQ 457
YLH+ D+I+RD+K N+L+D ++V DFG ++ V + GTP Y+ PE
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIL 211
Query: 458 CYQLTDKSDVYSFGVVLIELISSMP 482
D ++ GV++ E+ + P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 94/205 (45%), Gaps = 13/205 (6%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNN---YRRVEQFMNEVEILTRLRH 337
+ F R K LG G FG V K K+ G A+K L +++E +NE IL +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
LV L + + + L +V E+VA G + L + G P A +
Sbjct: 101 PFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFAEPHARFYAAQIVLTFE 155
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQ 457
YLH+ D+I+RD+K N+L+D ++V DFG ++ V + GTP Y+ PE
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIL 211
Query: 458 CYQLTDKSDVYSFGVVLIELISSMP 482
D ++ GV++ E+ + P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 123/272 (45%), Gaps = 53/272 (19%)
Query: 284 FSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNNYRRVEQFMN-EVEILTRLRHKNLV 341
++ K +G+G FG VY KL D G VA+K++ + ++F N E++I+ +L H N+V
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 89
Query: 342 SLFGCTSRYSQG-------LLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETAS 394
L YS G L LV ++V H RAK L +++ + +
Sbjct: 90 RLRYFF--YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFR 146
Query: 395 ALAYLHASDIIHRDVKTNNILLDSNFCV-KVADFGLSRLFPLDVTHVSTAPQGTPGYVDP 453
+LAY+H+ I HRD+K N+LLD + V K+ DFG ++ +VS Y+
Sbjct: 147 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--------YICS 198
Query: 454 EYHQCYQL-------TDKSDVYSFGVVLIELISSMPAVDMNRHRHEINLANLAINKIQKC 506
Y++ +L T DV+S G VL EL+ P +
Sbjct: 199 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD------------------S 240
Query: 507 AFDELID--PCLGFESDEEVKRMTTSVAELAF 536
D+L++ LG + E+++ M + E F
Sbjct: 241 GVDQLVEIIKVLGTPTREQIREMNPNYTEFKF 272
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 94/205 (45%), Gaps = 13/205 (6%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNN---YRRVEQFMNEVEILTRLRH 337
+ F R K LG G FG V K K+ G A+K L +++E +NE IL +
Sbjct: 36 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 95
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
LV L + + + L +V E+VA G + L + G P A +
Sbjct: 96 PFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFXEPHARFYAAQIVLTFE 150
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQ 457
YLH+ D+I+RD+K N+L+D ++V DFG ++ V + GTP Y+ PE
Sbjct: 151 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIL 206
Query: 458 CYQLTDKSDVYSFGVVLIELISSMP 482
D ++ GV++ E+ + P
Sbjct: 207 SKGYNKAVDWWALGVLIYEMAAGYP 231
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 123/272 (45%), Gaps = 53/272 (19%)
Query: 284 FSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNNYRRVEQFMN-EVEILTRLRHKNLV 341
++ K +G+G FG VY KL D G VA+K++ + ++F N E++I+ +L H N+V
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 155
Query: 342 SLFGCTSRYSQG-------LLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETAS 394
L YS G L LV ++V H RAK L +++ + +
Sbjct: 156 RLRYFF--YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFR 212
Query: 395 ALAYLHASDIIHRDVKTNNILLDSNFCV-KVADFGLSRLFPLDVTHVSTAPQGTPGYVDP 453
+LAY+H+ I HRD+K N+LLD + V K+ DFG ++ +VS Y+
Sbjct: 213 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--------YICS 264
Query: 454 EYHQCYQL-------TDKSDVYSFGVVLIELISSMPAVDMNRHRHEINLANLAINKIQKC 506
Y++ +L T DV+S G VL EL+ P +
Sbjct: 265 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD------------------S 306
Query: 507 AFDELID--PCLGFESDEEVKRMTTSVAELAF 536
D+L++ LG + E+++ M + E F
Sbjct: 307 GVDQLVEIIKVLGTPTREQIREMNPNYTEFKF 338
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 94/205 (45%), Gaps = 13/205 (6%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNN---YRRVEQFMNEVEILTRLRH 337
+ F R K LG G FG V K K+ G A+K L +++E +NE IL +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
LV L + + + L +V E+VA G + L + G P A +
Sbjct: 101 PFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFXEPHARFYAAQIVLTFE 155
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQ 457
YLH+ D+I+RD+K N+L+D ++V DFG ++ V + GTP Y+ PE
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIL 211
Query: 458 CYQLTDKSDVYSFGVVLIELISSMP 482
D ++ GV++ E+ + P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 123/272 (45%), Gaps = 53/272 (19%)
Query: 284 FSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNNYRRVEQFMN-EVEILTRLRHKNLV 341
++ K +G+G FG VY KL D G VA+K++ + ++F N E++I+ +L H N+V
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 81
Query: 342 SLFGCTSRYSQG-------LLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETAS 394
L YS G L LV ++V H RAK L +++ + +
Sbjct: 82 RLRYFF--YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFR 138
Query: 395 ALAYLHASDIIHRDVKTNNILLDSNFCV-KVADFGLSRLFPLDVTHVSTAPQGTPGYVDP 453
+LAY+H+ I HRD+K N+LLD + V K+ DFG ++ +VS Y+
Sbjct: 139 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--------YICS 190
Query: 454 EYHQCYQL-------TDKSDVYSFGVVLIELISSMPAVDMNRHRHEINLANLAINKIQKC 506
Y++ +L T DV+S G VL EL+ P +
Sbjct: 191 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD------------------S 232
Query: 507 AFDELID--PCLGFESDEEVKRMTTSVAELAF 536
D+L++ LG + E+++ M + E F
Sbjct: 233 GVDQLVEIIKVLGTPTREQIREMNPNYTEFKF 264
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 94/205 (45%), Gaps = 13/205 (6%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNN---YRRVEQFMNEVEILTRLRH 337
+ F R K LG G FG V K K+ G A+K L +++E +NE IL +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
LV L + + + L +V E+VA G + L + G P A +
Sbjct: 101 PFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFXEPHARFYAAQIVLTFE 155
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQ 457
YLH+ D+I+RD+K N+L+D ++V DFG ++ V + GTP Y+ PE
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIL 211
Query: 458 CYQLTDKSDVYSFGVVLIELISSMP 482
D ++ GV++ E+ + P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 98/213 (46%), Gaps = 33/213 (15%)
Query: 288 KELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEIL--TRLRHKNLVSLFG 345
K++G G +G V+ GK + G +VAVK + + E EI +RH+N++
Sbjct: 43 KQIGKGRYGEVWMGKWR-GEKVAVKVFFTTEE---ASWFRETEIYQTVLMRHENILGFIA 98
Query: 346 C----TSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHA 401
T ++Q L L+ ++ NG++ D L K L + +A + S L +LH
Sbjct: 99 ADIKGTGSWTQ-LYLITDYHENGSLYDYL-----KSTTLDAKSMLKLAYSSVSGLCHLHT 152
Query: 402 S--------DIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQ---GTPGY 450
I HRD+K+ NIL+ N +AD GL+ F D V P GT Y
Sbjct: 153 EIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRY 212
Query: 451 VDPEY------HQCYQLTDKSDVYSFGVVLIEL 477
+ PE +Q +D+YSFG++L E+
Sbjct: 213 MPPEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 93/202 (46%), Gaps = 10/202 (4%)
Query: 290 LGDGGFGTVYYGKLK-DGREVAVKRLYDNNYRRVEQFM--NEVEILTRLRHKNLVSLFG- 345
+G G +G + K DG+ + K L + E+ M +EV +L L+H N+V +
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 346 CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH----- 400
R + L +V E+ G +A + + L + + + AL H
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 401 ASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQ 460
++HRD+K N+ LD VK+ DFGL+R+ D + GTP Y+ PE
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD-EDFAKEFVGTPYYMSPEQMNRMS 192
Query: 461 LTDKSDVYSFGVVLIELISSMP 482
+KSD++S G +L EL + MP
Sbjct: 193 YNEKSDIWSLGCLLYELCALMP 214
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 101/211 (47%), Gaps = 21/211 (9%)
Query: 284 FSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDN-NYRRVEQFMNEVEILTRLRHKNLV 341
+ ++ LG GGFG V +D G +VA+K+ + + E++ E++I+ +L H N+V
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 75
Query: 342 SLFGCTSRYSQGL---------LLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIET 392
S GL LL E+ G + L+ GL PIR ++ +
Sbjct: 76 S----AREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS-DI 130
Query: 393 ASALAYLHASDIIHRDVKTNNILLD---SNFCVKVADFGLSRLFPLDVTHVSTAPQGTPG 449
+SAL YLH + IIHRD+K NI+L K+ D G ++ LD + T GT
Sbjct: 131 SSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK--ELDQGELCTEFVGTLQ 188
Query: 450 YVDPEYHQCYQLTDKSDVYSFGVVLIELISS 480
Y+ PE + + T D +SFG + E I+
Sbjct: 189 YLAPELLEQKKYTVTVDYWSFGTLAFECITG 219
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 94/205 (45%), Gaps = 13/205 (6%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNN---YRRVEQFMNEVEILTRLRH 337
+ F R K LG G FG V K K+ G A+K L +++E +NE IL +
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
LV L + + + L +V E+VA G + L + G P A +
Sbjct: 122 PFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFXEPHARFYAAQIVLTFE 176
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQ 457
YLH+ D+I+RD+K N+L+D ++V DFG ++ V + GTP Y+ PE
Sbjct: 177 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIL 232
Query: 458 CYQLTDKSDVYSFGVVLIELISSMP 482
D ++ GV++ E+ + P
Sbjct: 233 SKGYNKAVDWWALGVLIYEMAAGYP 257
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 99/212 (46%), Gaps = 19/212 (8%)
Query: 280 ATNDFSREKE-------LGDGGFGTVYYGKLKD----GREVAVKRLYDNNYRRV-EQFMN 327
+T D+ ++E +G+G FG V+ G VA+K + V E+F+
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 60
Query: 328 EVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMN 387
E + + H ++V L G + + ++ E G + L + L + +
Sbjct: 61 EALTMRQFDHPHIVKLIGVIT--ENPVWIIMELCTLGELRSFLQVRKFSLDLASLIL--- 115
Query: 388 IAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGT 447
A + ++ALAYL + +HRD+ N+L+ + CVK+ DFGLSR D T+ +
Sbjct: 116 YAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYME-DSTYYKASKGKL 174
Query: 448 P-GYVDPEYHQCYQLTDKSDVYSFGVVLIELI 478
P ++ PE + T SDV+ FGV + E++
Sbjct: 175 PIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 123/272 (45%), Gaps = 53/272 (19%)
Query: 284 FSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNNYRRVEQFMN-EVEILTRLRHKNLV 341
++ K +G+G FG VY KL D G VA+K++ + ++F N E++I+ +L H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 76
Query: 342 SLFGCTSRYSQG-------LLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETAS 394
L YS G L LV ++V H RAK L +++ + +
Sbjct: 77 RLRYFF--YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFR 133
Query: 395 ALAYLHASDIIHRDVKTNNILLDSNFCV-KVADFGLSRLFPLDVTHVSTAPQGTPGYVDP 453
+LAY+H+ I HRD+K N+LLD + V K+ DFG ++ +VS Y+
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--------YICS 185
Query: 454 EYHQCYQL-------TDKSDVYSFGVVLIELISSMPAVDMNRHRHEINLANLAINKIQKC 506
Y++ +L T DV+S G VL EL+ P +
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD------------------S 227
Query: 507 AFDELID--PCLGFESDEEVKRMTTSVAELAF 536
D+L++ LG + E+++ M + E F
Sbjct: 228 GVDQLVEIIKVLGTPTREQIREMNPNYTEFKF 259
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 132/287 (45%), Gaps = 48/287 (16%)
Query: 288 KELGDGGFGTVYYG-KLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLR-HKNLVSL 343
K+LG G +G V+ + G VAVK+++D N ++ E+ ILT L H+N+V+L
Sbjct: 15 KKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNL 74
Query: 344 FGCT-SRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHAS 402
+ + + LV++++ LH + +L + + + + YLH+
Sbjct: 75 LNVLRADNDRDVYLVFDYMET-----DLHA-VIRANILEPVHKQYVVYQLIKVIKYLHSG 128
Query: 403 DIIHRDVKTNNILLDSNFCVKVADFGLSRLF----------PLDVTH----------VST 442
++HRD+K +NILL++ VKVADFGLSR F PL + + T
Sbjct: 129 GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILT 188
Query: 443 APQGTPGYVDPE-YHQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHRHEINLANLAIN 501
T Y PE + T D++S G +L E++ P I + +N
Sbjct: 189 DYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKP----------IFPGSSTMN 238
Query: 502 KIQKCAFDELIDPCLGFESDEEVKRMTTSVAELAFLCLQQNKELRPS 548
++++ I + F S+E+V+ + + A+ L++ E+R S
Sbjct: 239 QLER------IIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQS 279
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 112/228 (49%), Gaps = 36/228 (15%)
Query: 275 SDLAEATNDFSREKE---LGDGGFGTVYYGK-LKDGREVAVKRLYDNNYRRVEQFMNEVE 330
SDL E ++ + LG G +G VY G+ L + +A+K + + + R + E+
Sbjct: 12 SDLLEYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIA 71
Query: 331 ILTRLRHKNLVSLFGCTSRYSQGLLLVY-EFVANGTVADQLHGDRAKHGLLTWPIRMN-- 387
+ L+HKN+V G S G + ++ E V G+++ L R+K G P++ N
Sbjct: 72 LHKHLKHKNIVQYLGSFSE--NGFIKIFMEQVPGGSLSALL---RSKWG----PLKDNEQ 122
Query: 388 -IAIETAS---ALAYLHASDIIHRDVKTNNILLDS-NFCVKVADFGLSRLFPLDVTHVST 442
I T L YLH + I+HRD+K +N+L+++ + +K++DFG S+ + +
Sbjct: 123 TIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA-GINPCTE 181
Query: 443 APQGTPGYVDPEYHQCYQLTDK--------SDVYSFGVVLIELISSMP 482
GT Y+ PE + DK +D++S G +IE+ + P
Sbjct: 182 TFTGTLQYMAPE------IIDKGPRGYGKAADIWSLGCTIIEMATGKP 223
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 101/211 (47%), Gaps = 21/211 (9%)
Query: 284 FSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDN-NYRRVEQFMNEVEILTRLRHKNLV 341
+ ++ LG GGFG V +D G +VA+K+ + + E++ E++I+ +L H N+V
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 76
Query: 342 SLFGCTSRYSQGL---------LLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIET 392
S GL LL E+ G + L+ GL PIR ++ +
Sbjct: 77 S----AREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS-DI 131
Query: 393 ASALAYLHASDIIHRDVKTNNILLD---SNFCVKVADFGLSRLFPLDVTHVSTAPQGTPG 449
+SAL YLH + IIHRD+K NI+L K+ D G ++ LD + T GT
Sbjct: 132 SSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK--ELDQGELCTEFVGTLQ 189
Query: 450 YVDPEYHQCYQLTDKSDVYSFGVVLIELISS 480
Y+ PE + + T D +SFG + E I+
Sbjct: 190 YLAPELLEQKKYTVTVDYWSFGTLAFECITG 220
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 97/194 (50%), Gaps = 12/194 (6%)
Query: 290 LGDGGFGTVYYGKLK-DGREVAVKRLYDNNYRR---VEQFMNEVEILTRLRHKNLVSLFG 345
LG G FG V G+ + G +VAVK L R V + E++ L RH +++ L+
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 346 CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDII 405
S + +V E+V+ G + D + KHG + + + SA+ Y H ++
Sbjct: 79 VISTPTD-FFMVMEYVSGGELFDYI----CKHGRVEEMEARRLFQQILSAVDYCHRHMVV 133
Query: 406 HRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQLTD-K 464
HRD+K N+LLD++ K+ADFGLS + D + T+ G+P Y PE +
Sbjct: 134 HRDLKPENVLLDAHMNAKIADFGLSNMMS-DGEFLRTSC-GSPNYAAPEVISGRLYAGPE 191
Query: 465 SDVYSFGVVLIELI 478
D++S GV+L L+
Sbjct: 192 VDIWSCGVILYALL 205
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 95/205 (46%), Gaps = 13/205 (6%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNN---YRRVEQFMNEVEILTRLRH 337
+ F R K LG G FG V K K+ G A+K L +++E +NE IL +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
LV L + + + L +V E+VA G + L + G + P A +
Sbjct: 101 PFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFE 155
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQ 457
YLH+ D+I+RD+K N+++D ++V DFG ++ V + GTP Y+ PE
Sbjct: 156 YLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIII 211
Query: 458 CYQLTDKSDVYSFGVVLIELISSMP 482
D ++ GV++ E+ + P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 100/210 (47%), Gaps = 13/210 (6%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKDGREV-AVKRLYDNNYRR---VEQFMNEVEILTRLRH 337
DF+ LG G FG V K E+ A+K L + + VE M E +L L
Sbjct: 19 TDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDK 78
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
++ + L V E+V G + + + G P + A E + L
Sbjct: 79 PPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQ----QVGKFKEPQAVFYAAEISIGLF 134
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQ-GTPGYVDPEYH 456
+LH II+RD+K +N++LDS +K+ADFG+ + +D V+T GTP Y+ PE
Sbjct: 135 FLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMD--GVTTREFCGTPDYIAPEI- 191
Query: 457 QCYQLTDKS-DVYSFGVVLIELISSMPAVD 485
YQ KS D +++GV+L E+++ P D
Sbjct: 192 IAYQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 104/230 (45%), Gaps = 28/230 (12%)
Query: 283 DFSREKELGDGGFGTVYYGKLKDGREV----AVKR---LYDNNYRRVEQFMNEVEILT-R 334
DF K LG G FG V+ + K + A+K+ L D++ VE M E +L+
Sbjct: 18 DFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDD---VECTMVEKRVLSLA 74
Query: 335 LRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHG----DRAKHGLLTWPIRMNIAI 390
H L +F CT + + L V E++ G + + D ++ A
Sbjct: 75 WEHPFLTHMF-CTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATF--------YAA 125
Query: 391 ETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGY 450
E L +LH+ I++RD+K +NILLD + +K+ADFG+ + L + GTP Y
Sbjct: 126 EIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFC-GTPDY 184
Query: 451 VDPEYHQCYQLTDKSDVYSFGVVLIELI---SSMPAVDMNRHRHEINLAN 497
+ PE + D +SFGV+L E++ S D H I + N
Sbjct: 185 IAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDN 234
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 95/205 (46%), Gaps = 13/205 (6%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNN---YRRVEQFMNEVEILTRLRH 337
+ F R K LG G FG V K K+ G A+K L +++E +NE IL +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
LV L + + + L +V E+VA G + L + G + P A +
Sbjct: 101 PFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFE 155
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQ 457
YLH+ D+I+RD+K N+L+D ++V DFG ++ V + GTP Y+ PE
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIL 211
Query: 458 CYQLTDKSDVYSFGVVLIELISSMP 482
D ++ GV++ ++ + P
Sbjct: 212 SKGYNKAVDWWALGVLIYQMAAGYP 236
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 100/226 (44%), Gaps = 33/226 (14%)
Query: 281 TNDFSREKELGDGGFGTVYYGK-LKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKN 339
+DF LG G FG V + D R A+K++ + ++ ++EV +L L H+
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASLNHQY 63
Query: 340 LVSLFGC------------TSRYSQGLLLVYEFVANGTVADQLHGDRAKHGL-LTWPIRM 386
+V + + L + E+ NGT+ D +H + W +
Sbjct: 64 VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFR 123
Query: 387 NIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSR-------LFPLDVTH 439
I AL+Y+H+ IIHRD+K NI +D + VK+ DFGL++ + LD +
Sbjct: 124 QIL----EALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 440 VS------TAPQGTPGYVDPE-YHQCYQLTDKSDVYSFGVVLIELI 478
+ T+ GT YV E +K D+YS G++ E+I
Sbjct: 180 LPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 120/272 (44%), Gaps = 53/272 (19%)
Query: 284 FSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNNYRRVEQFMN-EVEILTRLRHKNLV 341
++ K +G+G FG VY KL D G VA+K++ + F N E++I+ +L H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQG-----KAFKNRELQIMRKLDHCNIV 76
Query: 342 SLFGCTSRYSQG-------LLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETAS 394
L YS G L LV ++V H RAK L +++ + +
Sbjct: 77 RLRYFF--YSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYM-YQLFR 133
Query: 395 ALAYLHASDIIHRDVKTNNILLDSNFCV-KVADFGLSRLFPLDVTHVST-------APQG 446
+LAY+H+ I HRD+K N+LLD + V K+ DFG ++ +VS AP+
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 193
Query: 447 TPGYVDPEYHQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHRHEINLANLAINKIQKC 506
G D T DV+S G VL EL+ P +
Sbjct: 194 IFGATD--------YTSSIDVWSAGCVLAELLLGQPIFPGD------------------S 227
Query: 507 AFDELID--PCLGFESDEEVKRMTTSVAELAF 536
D+L++ LG + E+++ M + E AF
Sbjct: 228 GVDQLVEIIKVLGTPTREQIREMNPNYTEFAF 259
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 94/204 (46%), Gaps = 11/204 (5%)
Query: 280 ATNDFSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNNYRR---VEQFMNEVEILTRL 335
++F + LG G FG V ++K+ G AVK L + + VE M E IL+
Sbjct: 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLA 80
Query: 336 RHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASA 395
R+ ++ C + L V EFV G + + R A E SA
Sbjct: 81 RNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRR----FDEARARFYAAEIISA 136
Query: 396 LAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQ-GTPGYVDPE 454
L +LH II+RD+K +N+LLD K+ADFG+ + V+TA GTP Y+ PE
Sbjct: 137 LMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCK--EGICNGVTTATFCGTPDYIAPE 194
Query: 455 YHQCYQLTDKSDVYSFGVVLIELI 478
Q D ++ GV+L E++
Sbjct: 195 ILQEMLYGPAVDWWAMGVLLYEML 218
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 111/228 (48%), Gaps = 20/228 (8%)
Query: 265 VYFGVP-IFSYSDLAEATNDFSREKELGDGGFGTVYYGKLK-DGREVAVKRLYDNNYRRV 322
+YF P +F A ++ + ++ LG G FG V K K G+E AVK + ++
Sbjct: 14 LYFQGPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQK 73
Query: 323 ---EQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLL-LVYEFVANGTVADQLHGDRAKHG 378
E + EV++L +L H N++ L+ +G LV E G + D++ +
Sbjct: 74 TDKESLLREVQLLKQLDHPNIMKLYEFFE--DKGYFYLVGEVYTGGELFDEIISRKR--- 128
Query: 379 LLTWPIRMNIAIETASALAYLHASDIIHRDVKTNNILLDS---NFCVKVADFGLSRLFPL 435
+ I + S + Y+H + I+HRD+K N+LL+S + +++ DFGLS F
Sbjct: 129 -FSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-- 185
Query: 436 DVTHVSTAPQGTPGYVDPE-YHQCYQLTDKSDVYSFGVVLIELISSMP 482
+ + GT Y+ PE H Y +K DV+S GV+L L+S P
Sbjct: 186 EASKKMKDKIGTAYYIAPEVLHGTYD--EKCDVWSTGVILYILLSGCP 231
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 106/214 (49%), Gaps = 18/214 (8%)
Query: 282 NDFSREKELGDGGFGTVY------YGKLKDGREVAVKRLYDNNYR-RVEQFMNEVEILTR 334
N+ K LG G FG V GK +VAVK L + E M+E++I++
Sbjct: 38 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 97
Query: 335 L-RHKNLVSLFG-CTSRYSQGLLLVYEFVANGTVADQL----HGDRAKHGLLTWPIR--M 386
L +H+N+V+L G CT + +L++ E+ G + + L D K +R +
Sbjct: 98 LGQHENIVNLLGACT--HGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLL 155
Query: 387 NIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQG 446
+ + + A +A+L + + IHRDV N+LL + K+ DFGL+R D ++
Sbjct: 156 HFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNAR 215
Query: 447 TP-GYVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
P ++ PE T +SDV+S+G++L E+ S
Sbjct: 216 LPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 95/205 (46%), Gaps = 13/205 (6%)
Query: 282 NDFSREKELGDGGFGTVYYGK-LKDGREVAVKRLYDNN---YRRVEQFMNEVEILTRLRH 337
+ F R K +G G FG V K ++ G A+K L +++E +NE IL +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
LV L + + + L +V E++ G + L + G + P A +
Sbjct: 101 PFLVKL-EFSFKDNSNLYMVMEYMPGGDMFSHLR----RIGRFSEPHARFYAAQIVLTFE 155
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQ 457
YLH+ D+I+RD+K N+L+D +KVADFG ++ V + GTP Y+ PE
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAK----RVKGRTWXLCGTPEYLAPEIIL 211
Query: 458 CYQLTDKSDVYSFGVVLIELISSMP 482
D ++ GV++ E+ + P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 121/272 (44%), Gaps = 53/272 (19%)
Query: 284 FSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNNYRRVEQFMN-EVEILTRLRHKNLV 341
++ K +G+G FG VY KL D G VA+K++ + ++F N E++I+ +L H N+V
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 84
Query: 342 SLFGCTSRYSQG-------LLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETAS 394
L YS G L LV ++V H RAK L +++ + +
Sbjct: 85 RLRYFF--YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFR 141
Query: 395 ALAYLHASDIIHRDVKTNNILLDSNFCV-KVADFGLSRLFPLDVTHVST-------APQG 446
+LAY+H+ I HRD+K N+LLD + V K+ DFG ++ +VS AP+
Sbjct: 142 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 201
Query: 447 TPGYVDPEYHQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHRHEINLANLAINKIQKC 506
G D T DV+S G VL EL+ P +
Sbjct: 202 IFGATD--------YTSSIDVWSAGCVLAELLLGQPIFPGD------------------S 235
Query: 507 AFDELID--PCLGFESDEEVKRMTTSVAELAF 536
D+L++ LG + E+++ M + E F
Sbjct: 236 GVDQLVEIIKVLGTPTREQIREMNPNYTEFKF 267
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 95/205 (46%), Gaps = 13/205 (6%)
Query: 282 NDFSREKELGDGGFGTVYYGK-LKDGREVAVKRLYDNN---YRRVEQFMNEVEILTRLRH 337
+ F R K +G G FG V K ++ G A+K L +++E +NE IL +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
LV L + + + L +V E++ G + L + G + P A +
Sbjct: 101 PFLVKL-EFSFKDNSNLYMVMEYMPGGDMFSHLR----RIGRFSEPHARFYAAQIVLTFE 155
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQ 457
YLH+ D+I+RD+K N+L+D +KVADFG ++ V + GTP Y+ PE
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAK----RVKGRTWXLCGTPEYLAPEIIL 211
Query: 458 CYQLTDKSDVYSFGVVLIELISSMP 482
D ++ GV++ E+ + P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 94/205 (45%), Gaps = 13/205 (6%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNN---YRRVEQFMNEVEILTRLRH 337
+ F R K LG G FG V K K+ G A+K L +++E +NE IL +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
LV L + + + L +V E+V G + L + G + P A +
Sbjct: 101 PFLVKL-EYSFKDNSNLYMVMEYVPGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFE 155
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQ 457
YLH+ D+I+RD+K N+L+D ++V DFG ++ V + GTP Y+ PE
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIL 211
Query: 458 CYQLTDKSDVYSFGVVLIELISSMP 482
D ++ GV++ E+ + P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 94/205 (45%), Gaps = 13/205 (6%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNN---YRRVEQFMNEVEILTRLRH 337
+ F R K LG G FG V K K+ G A+K L +++E +NE IL +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
LV L + + + L +V E+V G + L + G + P A +
Sbjct: 101 PFLVKL-EYSFKDNSNLYMVMEYVPGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFE 155
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQ 457
YLH+ D+I+RD+K N+L+D ++V DFG ++ V + GTP Y+ PE
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIL 211
Query: 458 CYQLTDKSDVYSFGVVLIELISSMP 482
D ++ GV++ E+ + P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 121/272 (44%), Gaps = 53/272 (19%)
Query: 284 FSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNNYRRVEQFMN-EVEILTRLRHKNLV 341
++ K +G+G FG VY KL D G VA+K++ + ++F N E++I+ +L H N+V
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 95
Query: 342 SLFGCTSRYSQG-------LLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETAS 394
L YS G L LV ++V H RAK L +++ + +
Sbjct: 96 RLRYFF--YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFR 152
Query: 395 ALAYLHASDIIHRDVKTNNILLDSNFCV-KVADFGLSRLFPLDVTHVST-------APQG 446
+LAY+H+ I HRD+K N+LLD + V K+ DFG ++ +VS AP+
Sbjct: 153 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 212
Query: 447 TPGYVDPEYHQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHRHEINLANLAINKIQKC 506
G D T DV+S G VL EL+ P +
Sbjct: 213 IFGATD--------YTSSIDVWSAGCVLAELLLGQPIFPGD------------------S 246
Query: 507 AFDELID--PCLGFESDEEVKRMTTSVAELAF 536
D+L++ LG + E+++ M + E F
Sbjct: 247 GVDQLVEIIKVLGTPTREQIREMNPNYTEFKF 278
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 112/242 (46%), Gaps = 36/242 (14%)
Query: 259 DLETGTVYFGVPIFSYSDLAEATNDFSREKELGDGGFGTVYYGKLKDGREVAVKRLYDNN 318
D+ T G+P+ +A ++ +G G FG V+ GK + G EVAVK +
Sbjct: 22 DMTTSGSGSGLPLLVQRTIART---IVLQESIGKGRFGEVWRGKWR-GEEVAVKIF---S 74
Query: 319 YRRVEQFMNEVEIL--TRLRHKNLVSLFGCTSR----YSQGLLLVYEFVANGTVADQLHG 372
R + E EI LRH+N++ ++ ++Q L LV ++ +G++ D L+
Sbjct: 75 SREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQ-LWLVSDYHEHGSLFDYLN- 132
Query: 373 DRAKHGLLTWPIRMNIAIETASALAYLHAS--------DIIHRDVKTNNILLDSNFCVKV 424
+T + +A+ TAS LA+LH I HRD+K+ NIL+ N +
Sbjct: 133 ----RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCI 188
Query: 425 ADFGLSRLFPLDVTHVSTAPQ---GTPGYVDPEY------HQCYQLTDKSDVYSFGVVLI 475
AD GL+ + AP GT Y+ PE + ++ ++D+Y+ G+V
Sbjct: 189 ADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFW 248
Query: 476 EL 477
E+
Sbjct: 249 EI 250
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 94/205 (45%), Gaps = 13/205 (6%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNN---YRRVEQFMNEVEILTRLRH 337
+ F R K LG G FG V K K+ G A+K L +++E +NE IL +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
LV L + + + L +V E+V G + L + G + P A +
Sbjct: 101 PFLVKL-EYSFKDNSNLYMVMEYVPGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFE 155
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQ 457
YLH+ D+I+RD+K N+L+D ++V DFG ++ V + GTP Y+ PE
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIL 211
Query: 458 CYQLTDKSDVYSFGVVLIELISSMP 482
D ++ GV++ E+ + P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 94/205 (45%), Gaps = 13/205 (6%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNN---YRRVEQFMNEVEILTRLRH 337
+ F R K LG G FG V K K+ G A+K L +++E +NE IL +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
LV L + + + L +V E+V G + L + G + P A +
Sbjct: 102 PFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFE 156
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQ 457
YLH+ D+I+RD+K N+L+D ++V DFG ++ V + GTP Y+ PE
Sbjct: 157 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIL 212
Query: 458 CYQLTDKSDVYSFGVVLIELISSMP 482
D ++ GV++ E+ + P
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 94/205 (45%), Gaps = 13/205 (6%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNN---YRRVEQFMNEVEILTRLRH 337
+ F R K LG G FG V K K+ G A+K L +++E +NE IL +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
LV L + + + L +V E+V G + L + G + P A +
Sbjct: 102 PFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFE 156
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQ 457
YLH+ D+I+RD+K N+L+D ++V DFG ++ V + GTP Y+ PE
Sbjct: 157 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIL 212
Query: 458 CYQLTDKSDVYSFGVVLIELISSMP 482
D ++ GV++ E+ + P
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 94/205 (45%), Gaps = 13/205 (6%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNN---YRRVEQFMNEVEILTRLRH 337
+ F R K LG G FG V K K+ G A+K L +++E +NE IL +
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
LV L + + + L +V E+V G + L + G + P A +
Sbjct: 94 PFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFE 148
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQ 457
YLH+ D+I+RD+K N+L+D ++V DFG ++ V + GTP Y+ PE
Sbjct: 149 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIL 204
Query: 458 CYQLTDKSDVYSFGVVLIELISSMP 482
D ++ GV++ E+ + P
Sbjct: 205 SKGYNKAVDWWALGVLIYEMAAGYP 229
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 121/272 (44%), Gaps = 53/272 (19%)
Query: 284 FSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNNYRRVEQFMN-EVEILTRLRHKNLV 341
++ K +G+G FG VY KL D G VA+K++ + ++F N E++I+ +L H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 76
Query: 342 SLFGCTSRYSQG-------LLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETAS 394
L YS G L LV ++V H RAK L +++ + +
Sbjct: 77 RLRYFF--YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFR 133
Query: 395 ALAYLHASDIIHRDVKTNNILLDSNFCV-KVADFGLSRLFPLDVTHVST-------APQG 446
+LAY+H+ I HRD+K N+LLD + V K+ DFG ++ +VS AP+
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 193
Query: 447 TPGYVDPEYHQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHRHEINLANLAINKIQKC 506
G D T DV+S G VL EL+ P +
Sbjct: 194 IFGATD--------YTSSIDVWSAGCVLAELLLGQPIFPGD------------------S 227
Query: 507 AFDELID--PCLGFESDEEVKRMTTSVAELAF 536
D+L++ LG + E+++ M + E F
Sbjct: 228 GVDQLVEIIKVLGTPTREQIREMNPNYTEFKF 259
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 94/205 (45%), Gaps = 13/205 (6%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNN---YRRVEQFMNEVEILTRLRH 337
+ F R K LG G FG V K K+ G A+K L +++E +NE IL +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
LV L + + + L +V E+V G + L + G + P A +
Sbjct: 102 PFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFE 156
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQ 457
YLH+ D+I+RD+K N+L+D ++V DFG ++ V + GTP Y+ PE
Sbjct: 157 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIL 212
Query: 458 CYQLTDKSDVYSFGVVLIELISSMP 482
D ++ GV++ E+ + P
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 123/270 (45%), Gaps = 49/270 (18%)
Query: 284 FSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNNYRRVEQFMN-EVEILTRLRHKNLV 341
++ K +G+G FG VY KL D G VA+K++ + ++F N E++I+ +L H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 76
Query: 342 SL--FGCTSRYSQGLL---LVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASAL 396
L F +S + ++ LV ++V H RAK L +++ + + +L
Sbjct: 77 RLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSL 135
Query: 397 AYLHASDIIHRDVKTNNILLDSNFCV-KVADFGLSRLFPLDVTHVST-------APQGTP 448
AY+H+ I HRD+K N+LLD + V K+ DFG ++ +VS AP+
Sbjct: 136 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF 195
Query: 449 GYVDPEYHQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHRHEINLANLAINKIQKCAF 508
G D T DV+S G VL EL+ P +
Sbjct: 196 GATD--------YTSSIDVWSAGCVLAELLLGQPIFPGD------------------SGV 229
Query: 509 DELID--PCLGFESDEEVKRMTTSVAELAF 536
D+L++ LG + E+++ M + E F
Sbjct: 230 DQLVEIIKVLGTPTREQIREMNPNYTEFKF 259
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 101/205 (49%), Gaps = 9/205 (4%)
Query: 279 EATNDFSREKELGDGGFGTVYYGKLK-DGREVAVKRL-YDNNYRRV-EQFMNEVEILTRL 335
E +F + +++G+G +G VY + K G VA+K++ D V + E+ +L L
Sbjct: 7 EFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 66
Query: 336 RHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASA 395
H N+V L ++ L LV+EF+ + D + + P+ + +
Sbjct: 67 NHPNIVKLLDVIHTENK-LYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQG 122
Query: 396 LAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPE- 454
LA+ H+ ++HRD+K N+L+++ +K+ADFGL+R F + V T T Y PE
Sbjct: 123 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVTLWYRAPEI 181
Query: 455 YHQCYQLTDKSDVYSFGVVLIELIS 479
C + D++S G + E+++
Sbjct: 182 LLGCKYYSTAVDIWSLGCIFAEMVT 206
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 121/272 (44%), Gaps = 53/272 (19%)
Query: 284 FSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNNYRRVEQFMN-EVEILTRLRHKNLV 341
++ K +G+G FG VY KL D G VA+K++ + ++F N E++I+ +L H N+V
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 88
Query: 342 SLFGCTSRYSQG-------LLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETAS 394
L YS G L LV ++V H RAK L +++ + +
Sbjct: 89 RLRYFF--YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFR 145
Query: 395 ALAYLHASDIIHRDVKTNNILLDSNFCV-KVADFGLSRLFPLDVTHVST-------APQG 446
+LAY+H+ I HRD+K N+LLD + V K+ DFG ++ +VS AP+
Sbjct: 146 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 205
Query: 447 TPGYVDPEYHQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHRHEINLANLAINKIQKC 506
G D T DV+S G VL EL+ P +
Sbjct: 206 IFGATD--------YTSSIDVWSAGCVLAELLLGQPIFPGD------------------S 239
Query: 507 AFDELID--PCLGFESDEEVKRMTTSVAELAF 536
D+L++ LG + E+++ M + E F
Sbjct: 240 GVDQLVEIIKVLGTPTREQIREMNPNYTEFKF 271
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 121/272 (44%), Gaps = 53/272 (19%)
Query: 284 FSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNNYRRVEQFMN-EVEILTRLRHKNLV 341
++ K +G+G FG VY KL D G VA+K++ + ++F N E++I+ +L H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 76
Query: 342 SLFGCTSRYSQG-------LLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETAS 394
L YS G L LV ++V H RAK L +++ + +
Sbjct: 77 RLRYFF--YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFR 133
Query: 395 ALAYLHASDIIHRDVKTNNILLDSNFCV-KVADFGLSRLFPLDVTHVST-------APQG 446
+LAY+H+ I HRD+K N+LLD + V K+ DFG ++ +VS AP+
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 193
Query: 447 TPGYVDPEYHQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHRHEINLANLAINKIQKC 506
G D T DV+S G VL EL+ P +
Sbjct: 194 IFGATD--------YTSSIDVWSAGCVLAELLLGQPIFPGD------------------S 227
Query: 507 AFDELID--PCLGFESDEEVKRMTTSVAELAF 536
D+L++ LG + E+++ M + E F
Sbjct: 228 GVDQLVEIIKVLGTPTREQIREMNPNYTEFKF 259
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 121/272 (44%), Gaps = 53/272 (19%)
Query: 284 FSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNNYRRVEQFMN-EVEILTRLRHKNLV 341
++ K +G+G FG VY KL D G VA+K++ + ++F N E++I+ +L H N+V
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 110
Query: 342 SLFGCTSRYSQG-------LLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETAS 394
L YS G L LV ++V H RAK L +++ + +
Sbjct: 111 RLRYFF--YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFR 167
Query: 395 ALAYLHASDIIHRDVKTNNILLDSNFCV-KVADFGLSRLFPLDVTHVST-------APQG 446
+LAY+H+ I HRD+K N+LLD + V K+ DFG ++ +VS AP+
Sbjct: 168 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 227
Query: 447 TPGYVDPEYHQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHRHEINLANLAINKIQKC 506
G D T DV+S G VL EL+ P +
Sbjct: 228 IFGATD--------YTSSIDVWSAGCVLAELLLGQPIFPGD------------------S 261
Query: 507 AFDELID--PCLGFESDEEVKRMTTSVAELAF 536
D+L++ LG + E+++ M + E F
Sbjct: 262 GVDQLVEIIKVLGTPTREQIREMNPNYTEFKF 293
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 94/205 (45%), Gaps = 13/205 (6%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNN---YRRVEQFMNEVEILTRLRH 337
+ F R K LG G FG V K K+ G A+K L +++E +NE IL +
Sbjct: 62 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
LV L + + + L +V E+V G + L + G + P A +
Sbjct: 122 PFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFE 176
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQ 457
YLH+ D+I+RD+K N+L+D ++V DFG ++ V + GTP Y+ PE
Sbjct: 177 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIL 232
Query: 458 CYQLTDKSDVYSFGVVLIELISSMP 482
D ++ GV++ E+ + P
Sbjct: 233 SKGYNKAVDWWALGVLIYEMAAGYP 257
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 97/200 (48%), Gaps = 17/200 (8%)
Query: 289 ELGDGGFGTV---YYGKLKDGREVAVKRLYDNNYRR-VEQFMNEVEILTRLRHKNLVSLF 344
ELG G FG+V Y K +VA+K L + E+ M E +I+ +L + +V L
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 402
Query: 345 GCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIA---IETASALAYLHA 401
G ++ L+LV E G + L G R + P+ N+A + + + YL
Sbjct: 403 GVCQ--AEALMLVMEMAGGGPLHKFLVGKREE-----IPVS-NVAELLHQVSMGMKYLEE 454
Query: 402 SDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP--GYVDPEYHQCY 459
+ +HR++ N+LL + K++DFGLS+ D ++ + G + PE
Sbjct: 455 KNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFR 514
Query: 460 QLTDKSDVYSFGVVLIELIS 479
+ + +SDV+S+GV + E +S
Sbjct: 515 KFSSRSDVWSYGVTMWEALS 534
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 112/242 (46%), Gaps = 36/242 (14%)
Query: 259 DLETGTVYFGVPIFSYSDLAEATNDFSREKELGDGGFGTVYYGKLKDGREVAVKRLYDNN 318
D+ T G+P+ +A ++ +G G FG V+ GK + G EVAVK +
Sbjct: 9 DMTTSGSGSGLPLLVQRTIART---IVLQESIGKGRFGEVWRGKWR-GEEVAVKIF---S 61
Query: 319 YRRVEQFMNEVEIL--TRLRHKNLVSLFGCTSR----YSQGLLLVYEFVANGTVADQLHG 372
R + E EI LRH+N++ ++ ++Q L LV ++ +G++ D L+
Sbjct: 62 SREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQ-LWLVSDYHEHGSLFDYLN- 119
Query: 373 DRAKHGLLTWPIRMNIAIETASALAYLHAS--------DIIHRDVKTNNILLDSNFCVKV 424
+T + +A+ TAS LA+LH I HRD+K+ NIL+ N +
Sbjct: 120 ----RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCI 175
Query: 425 ADFGLSRLFPLDVTHVSTAPQ---GTPGYVDPEY------HQCYQLTDKSDVYSFGVVLI 475
AD GL+ + AP GT Y+ PE + ++ ++D+Y+ G+V
Sbjct: 176 ADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFW 235
Query: 476 EL 477
E+
Sbjct: 236 EI 237
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 121/272 (44%), Gaps = 53/272 (19%)
Query: 284 FSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNNYRRVEQFMN-EVEILTRLRHKNLV 341
++ K +G+G FG VY KL D G VA+K++ + F N E++I+ +L H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQG-----KAFKNRELQIMRKLDHCNIV 76
Query: 342 SLFGCTSRYSQG-------LLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETAS 394
L YS G L LV ++V H RAK L +++ + +
Sbjct: 77 RLRYFF--YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFR 133
Query: 395 ALAYLHASDIIHRDVKTNNILLDSNFCV-KVADFGLSRLFPLDVTHVSTAPQGTPGYVDP 453
+LAY+H+ I HRD+K N+LLD + V K+ DFG ++ +VS Y+
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--------YICS 185
Query: 454 EYHQCYQL-------TDKSDVYSFGVVLIELISSMPAVDMNRHRHEINLANLAINKIQKC 506
Y++ +L T DV+S G VL EL+ P +
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD------------------S 227
Query: 507 AFDELID--PCLGFESDEEVKRMTTSVAELAF 536
D+L++ LG + E+++ M + E F
Sbjct: 228 GVDQLVEIIKVLGTPTREQIREMNPNYTEFKF 259
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 99/212 (46%), Gaps = 19/212 (8%)
Query: 280 ATNDFSREKE-------LGDGGFGTVYYGKLKD----GREVAVKRLYDNNYRRV-EQFMN 327
+T D+ ++E +G+G FG V+ G VA+K + V E+F+
Sbjct: 381 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 440
Query: 328 EVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMN 387
E + + H ++V L G + + ++ E G + L + L + +
Sbjct: 441 EALTMRQFDHPHIVKLIGVIT--ENPVWIIMELCTLGELRSFLQVRKFSLDLASLIL--- 495
Query: 388 IAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGT 447
A + ++ALAYL + +HRD+ N+L+ + CVK+ DFGLSR D T+ +
Sbjct: 496 YAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYME-DSTYYKASKGKL 554
Query: 448 P-GYVDPEYHQCYQLTDKSDVYSFGVVLIELI 478
P ++ PE + T SDV+ FGV + E++
Sbjct: 555 PIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 121/272 (44%), Gaps = 53/272 (19%)
Query: 284 FSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNNYRRVEQFMN-EVEILTRLRHKNLV 341
++ K +G+G FG VY KL D G VA+K++ + ++F N E++I+ +L H N+V
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 77
Query: 342 SLFGCTSRYSQG-------LLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETAS 394
L YS G L LV ++V H RAK L +++ + +
Sbjct: 78 RLRYFF--YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFR 134
Query: 395 ALAYLHASDIIHRDVKTNNILLDSNFCV-KVADFGLSRLFPLDVTHVST-------APQG 446
+LAY+H+ I HRD+K N+LLD + V K+ DFG ++ +VS AP+
Sbjct: 135 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 194
Query: 447 TPGYVDPEYHQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHRHEINLANLAINKIQKC 506
G D T DV+S G VL EL+ P +
Sbjct: 195 IFGATD--------YTSSIDVWSAGCVLAELLLGQPIFPGD------------------S 228
Query: 507 AFDELID--PCLGFESDEEVKRMTTSVAELAF 536
D+L++ LG + E+++ M + E F
Sbjct: 229 GVDQLVEIIKVLGTPTREQIREMNPNYTEFKF 260
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 121/272 (44%), Gaps = 53/272 (19%)
Query: 284 FSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNNYRRVEQFMN-EVEILTRLRHKNLV 341
++ K +G+G FG VY KL D G VA+K++ + ++F N E++I+ +L H N+V
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 88
Query: 342 SLFGCTSRYSQG-------LLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETAS 394
L YS G L LV ++V H RAK L +++ + +
Sbjct: 89 RLRYFF--YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFR 145
Query: 395 ALAYLHASDIIHRDVKTNNILLDSNFCV-KVADFGLSRLFPLDVTHVST-------APQG 446
+LAY+H+ I HRD+K N+LLD + V K+ DFG ++ +VS AP+
Sbjct: 146 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 205
Query: 447 TPGYVDPEYHQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHRHEINLANLAINKIQKC 506
G D T DV+S G VL EL+ P +
Sbjct: 206 IFGATD--------YTSSIDVWSAGCVLAELLLGQPIFPGD------------------S 239
Query: 507 AFDELID--PCLGFESDEEVKRMTTSVAELAF 536
D+L++ LG + E+++ M + E F
Sbjct: 240 GVDQLVEIIKVLGTPTREQIREMNPNYTEFKF 271
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 106/221 (47%), Gaps = 28/221 (12%)
Query: 282 NDFSREKELGDGGFGTVY------YGKLKDGREVAVKRLYDNNYR-RVEQFMNEVEILTR 334
N+ K LG G FG V GK +VAVK L + E M+E++I++
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 335 L-RHKNLVSLFG-CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIET 392
L +H+N+V+L G CT + +L++ E+ G D L+ R K +L IA T
Sbjct: 106 LGQHENIVNLLGACT--HGGPVLVITEYCCYG---DLLNFLRRKSRVLETDPAFAIANST 160
Query: 393 AS-------------ALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTH 439
AS +A+L + + IHRDV N+LL + K+ DFGL+R D +
Sbjct: 161 ASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNY 220
Query: 440 VSTAPQGTP-GYVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
+ P ++ PE T +SDV+S+G++L E+ S
Sbjct: 221 IVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 106/214 (49%), Gaps = 18/214 (8%)
Query: 282 NDFSREKELGDGGFGTVY------YGKLKDGREVAVKRLYDNNYR-RVEQFMNEVEILTR 334
N+ K LG G FG V GK +VAVK L + E M+E++I++
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 335 L-RHKNLVSLFG-CTSRYSQGLLLVYEFVANGTVADQL----HGDRAKHGLLTWPIR--M 386
L +H+N+V+L G CT + +L++ E+ G + + L D K +R +
Sbjct: 106 LGQHENIVNLLGACT--HGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLL 163
Query: 387 NIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQG 446
+ + + A +A+L + + IHRDV N+LL + K+ DFGL+R D ++
Sbjct: 164 HFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNAR 223
Query: 447 TP-GYVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
P ++ PE T +SDV+S+G++L E+ S
Sbjct: 224 LPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 94/205 (45%), Gaps = 13/205 (6%)
Query: 282 NDFSREKELGDGGFGTVYYGK-LKDGREVAVKRLYDNN---YRRVEQFMNEVEILTRLRH 337
+ F R K LG G FG V K ++ G A+K L +++E +NE IL +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
LV L + + + L +V E+V G + L + G + P A +
Sbjct: 102 PFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFE 156
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQ 457
YLH+ D+I+RD+K N+L+D ++V DFG ++ V + GTP Y+ PE
Sbjct: 157 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWTLCGTPEYLAPEIIL 212
Query: 458 CYQLTDKSDVYSFGVVLIELISSMP 482
D ++ GV++ E+ + P
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 121/272 (44%), Gaps = 53/272 (19%)
Query: 284 FSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNNYRRVEQFMN-EVEILTRLRHKNLV 341
++ K +G+G FG VY KL D G VA+K++ + ++F N E++I+ +L H N+V
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 80
Query: 342 SLFGCTSRYSQG-------LLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETAS 394
L YS G L LV ++V H RAK L +++ + +
Sbjct: 81 RLRYFF--YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFR 137
Query: 395 ALAYLHASDIIHRDVKTNNILLDSNFCV-KVADFGLSRLFPLDVTHVST-------APQG 446
+LAY+H+ I HRD+K N+LLD + V K+ DFG ++ +VS AP+
Sbjct: 138 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 197
Query: 447 TPGYVDPEYHQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHRHEINLANLAINKIQKC 506
G D T DV+S G VL EL+ P +
Sbjct: 198 IFGATD--------YTSSIDVWSAGCVLAELLLGQPIFPGD------------------S 231
Query: 507 AFDELID--PCLGFESDEEVKRMTTSVAELAF 536
D+L++ LG + E+++ M + E F
Sbjct: 232 GVDQLVEIIKVLGTPTREQIREMNPNYTEFKF 263
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 94/205 (45%), Gaps = 13/205 (6%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNN---YRRVEQFMNEVEILTRLRH 337
+ F R K LG G FG V K K+ G A+K L +++E +NE IL +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
LV L + + + L +V E+VA G + L + G + P A +
Sbjct: 101 PFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFE 155
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQ 457
YLH+ D+I+RD+K N+L+D ++V DFG ++ V + GTP Y+ P
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPAIIL 211
Query: 458 CYQLTDKSDVYSFGVVLIELISSMP 482
D ++ GV++ E+ + P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 94/205 (45%), Gaps = 13/205 (6%)
Query: 282 NDFSREKELGDGGFGTVYYGK-LKDGREVAVKRLYDNN---YRRVEQFMNEVEILTRLRH 337
+ F R K LG G FG V K ++ G A+K L +++E +NE IL +
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 86
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
LV L + + + L +V E+V G + L + G + P A +
Sbjct: 87 PFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFE 141
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQ 457
YLH+ D+I+RD+K N+L+D ++V DFG ++ V + GTP Y+ PE
Sbjct: 142 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWTLCGTPEYLAPEIIL 197
Query: 458 CYQLTDKSDVYSFGVVLIELISSMP 482
D ++ GV++ E+ + P
Sbjct: 198 SKGYNKAVDWWALGVLIYEMAAGYP 222
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 94/205 (45%), Gaps = 13/205 (6%)
Query: 282 NDFSREKELGDGGFGTVYYGK-LKDGREVAVKRLYDNN---YRRVEQFMNEVEILTRLRH 337
+ F R K LG G FG V K ++ G A+K L +++E +NE IL +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
LV L + + + L +V E+V G + L + G + P A +
Sbjct: 102 PFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFE 156
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQ 457
YLH+ D+I+RD+K N+L+D ++V DFG ++ V + GTP Y+ PE
Sbjct: 157 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIL 212
Query: 458 CYQLTDKSDVYSFGVVLIELISSMP 482
D ++ GV++ E+ + P
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 94/205 (45%), Gaps = 13/205 (6%)
Query: 282 NDFSREKELGDGGFGTVYYGK-LKDGREVAVKRLYDNN---YRRVEQFMNEVEILTRLRH 337
+ F R K LG G FG V K ++ G A+K L +++E +NE IL +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
LV L + + + L +V E+V G + L + G + P A +
Sbjct: 101 PFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFE 155
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQ 457
YLH+ D+I+RD+K N+L+D ++V DFG ++ V + GTP Y+ PE
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIL 211
Query: 458 CYQLTDKSDVYSFGVVLIELISSMP 482
D ++ GV++ E+ + P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 94/205 (45%), Gaps = 13/205 (6%)
Query: 282 NDFSREKELGDGGFGTVYYGK-LKDGREVAVKRLYDNN---YRRVEQFMNEVEILTRLRH 337
+ F R K LG G FG V K ++ G A+K L +++E +NE IL +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
LV L + + + L +V E+V G + L + G + P A +
Sbjct: 101 PFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFE 155
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQ 457
YLH+ D+I+RD+K N+L+D ++V DFG ++ V + GTP Y+ PE
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIL 211
Query: 458 CYQLTDKSDVYSFGVVLIELISSMP 482
D ++ GV++ E+ + P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 13/205 (6%)
Query: 282 NDFSREKELGDGGFGTVYYGK-LKDGREVAVKRLYDNN---YRRVEQFMNEVEILTRLRH 337
+ F R K LG G FG V K ++ G A+K L + +E +NE IL +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
LV L + + + L +V E+ G + L + G + P A +
Sbjct: 101 PFLVKL-EFSFKDNSNLYMVMEYAPGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFE 155
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQ 457
YLH+ D+I+RD+K N+++D +KV DFGL++ V + GTP Y+ PE
Sbjct: 156 YLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAK----RVKGRTWXLCGTPEYLAPEIIL 211
Query: 458 CYQLTDKSDVYSFGVVLIELISSMP 482
D ++ GV++ E+ + P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 93/205 (45%), Gaps = 13/205 (6%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNN---YRRVEQFMNEVEILTRLRH 337
+ F R K LG G FG V K K+ G A+K L +++E +NE IL +
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
LV L + + + L +V E+V G + L + G P A +
Sbjct: 94 PFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLR----RIGRFXEPHARFYAAQIVLTFE 148
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQ 457
YLH+ D+I+RD+K N+L+D ++V DFG ++ V + GTP Y+ PE
Sbjct: 149 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIL 204
Query: 458 CYQLTDKSDVYSFGVVLIELISSMP 482
D ++ GV++ E+ + P
Sbjct: 205 SKGYNKAVDWWALGVLIYEMAAGYP 229
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 94/205 (45%), Gaps = 13/205 (6%)
Query: 282 NDFSREKELGDGGFGTVYYGK-LKDGREVAVKRLYDNN---YRRVEQFMNEVEILTRLRH 337
+ F R K LG G FG V K ++ G A+K L +++E +NE IL +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
LV L + + + L +V E+V G + L + G + P A +
Sbjct: 101 PFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFE 155
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQ 457
YLH+ D+I+RD+K N+L+D ++V DFG ++ V + GTP Y+ PE
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIL 211
Query: 458 CYQLTDKSDVYSFGVVLIELISSMP 482
D ++ GV++ E+ + P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 105/210 (50%), Gaps = 33/210 (15%)
Query: 290 LGDGGFGTVYYGK-LKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCTS 348
LG G +G VY G+ L + +A+K + + + R + E+ + L+HKN+V G S
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 75
Query: 349 RYSQGLLLVY-EFVANGTVADQLHGDRAKHGLLTWPIRMN---IAIETAS---ALAYLHA 401
G + ++ E V G+++ L R+K G P++ N I T L YLH
Sbjct: 76 E--NGFIKIFMEQVPGGSLSALL---RSKWG----PLKDNEQTIGFYTKQILEGLKYLHD 126
Query: 402 SDIIHRDVKTNNILLDS-NFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQ 460
+ I+HRD+K +N+L+++ + +K++DFG S+ + + GT Y+ PE
Sbjct: 127 NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA-GINPCTETFTGTLQYMAPE------ 179
Query: 461 LTDK--------SDVYSFGVVLIELISSMP 482
+ DK +D++S G +IE+ + P
Sbjct: 180 IIDKGPRGYGKAADIWSLGCTIIEMATGKP 209
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 102/210 (48%), Gaps = 21/210 (10%)
Query: 280 ATNDFSREKELGDGGFGTVYYGKLK-DGREVAVKRL-YDNNYRRV-EQFMNEVEILTRLR 336
+ +F + +++G+G +G VY + K G VA+K++ D V + E+ +L L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 337 HKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKH---GLLT---WPIRMNIAI 390
H N+V L ++ L LV+EF LH D K LT P+ +
Sbjct: 62 HPNIVKLLDVIHTENK-LYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLF 111
Query: 391 ETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGY 450
+ LA+ H+ ++HRD+K N+L+++ +K+ADFGL+R F + V T T Y
Sbjct: 112 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVTLWY 170
Query: 451 VDPE-YHQCYQLTDKSDVYSFGVVLIELIS 479
PE C + D++S G + E+++
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 95/201 (47%), Gaps = 18/201 (8%)
Query: 290 LGDGGFGTVYYGKLKD---GREVAVKRLYDNNYRR--VEQFMNEVEILTRLRHKNLVSLF 344
LG G FG V K KD +E AVK + + + + EVE+L +L H N++ LF
Sbjct: 30 LGKGSFGEVL--KCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLF 87
Query: 345 GCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDI 404
S +V E G + D++ K + I + S + Y+H +I
Sbjct: 88 EILED-SSSFYIVGELYTGGELFDEI----IKRKRFSEHDAARIIKQVFSGITYMHKHNI 142
Query: 405 IHRDVKTNNILLDS---NFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQL 461
+HRD+K NILL+S + +K+ DFGLS F + GT Y+ PE +
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI--GTAYYIAPEVLRG-TY 199
Query: 462 TDKSDVYSFGVVLIELISSMP 482
+K DV+S GV+L L+S P
Sbjct: 200 DEKCDVWSAGVILYILLSGTP 220
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 100/201 (49%), Gaps = 9/201 (4%)
Query: 283 DFSREKELGDGGFGTVYYGKLK-DGREVAVKRL-YDNNYRRV-EQFMNEVEILTRLRHKN 339
+F + +++G+G +G VY + K G VA+K++ D V + E+ +L L H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 340 LVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYL 399
+V L ++ L LV+EF+ + D + + P+ + + LA+
Sbjct: 63 IVKLLDVIHTENK-LYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 400 HASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPE-YHQC 458
H+ ++HRD+K N+L+++ +K+ADFGL+R F + V T T Y PE C
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVTLWYRAPEILLGC 177
Query: 459 YQLTDKSDVYSFGVVLIELIS 479
+ D++S G + E+++
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVT 198
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 13/205 (6%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNN---YRRVEQFMNEVEILTRLRH 337
+ F R K LG G FG V K K+ G A+K L +++E +NE IL +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
LV L + + + L +V E+ G + L + G + P A +
Sbjct: 102 PFLVKL-EFSFKDNSNLYMVMEYAPGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFE 156
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQ 457
YLH+ D+I+RD+K N+++D +KV DFG ++ V + GTP Y+ PE
Sbjct: 157 YLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIL 212
Query: 458 CYQLTDKSDVYSFGVVLIELISSMP 482
D ++ GV++ E+ + P
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 101/208 (48%), Gaps = 21/208 (10%)
Query: 282 NDFSREKELGDGGFGTVYYGKLK-DGREVAVKRL-YDNNYRRV-EQFMNEVEILTRLRHK 338
+F + +++G+G +G VY + K G VA+K++ D V + E+ +L L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 339 NLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKH---GLLT---WPIRMNIAIET 392
N+V L ++ L LV+EF LH D K LT P+ + +
Sbjct: 63 NIVKLLDVIHTENK-LYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQL 112
Query: 393 ASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVD 452
LA+ H+ ++HRD+K N+L+++ +K+ADFGL+R F + V T T Y
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVTLWYRA 171
Query: 453 PE-YHQCYQLTDKSDVYSFGVVLIELIS 479
PE C + D++S G + E+++
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 101/208 (48%), Gaps = 21/208 (10%)
Query: 282 NDFSREKELGDGGFGTVYYGKLK-DGREVAVKRL-YDNNYRRV-EQFMNEVEILTRLRHK 338
+F + +++G+G +G VY + K G VA+K++ D V + E+ +L L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 339 NLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKH---GLLT---WPIRMNIAIET 392
N+V L ++ L LV+EF LH D K LT P+ + +
Sbjct: 62 NIVKLLDVIHTENK-LYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQL 111
Query: 393 ASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVD 452
LA+ H+ ++HRD+K N+L+++ +K+ADFGL+R F + V T T Y
Sbjct: 112 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVTLWYRA 170
Query: 453 PE-YHQCYQLTDKSDVYSFGVVLIELIS 479
PE C + D++S G + E+++
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 101/210 (48%), Gaps = 21/210 (10%)
Query: 280 ATNDFSREKELGDGGFGTVYYGKLK-DGREVAVKRL-YDNNYRRV-EQFMNEVEILTRLR 336
+F + +++G+G +G VY + K G VA+K++ D V + E+ +L L
Sbjct: 1 GMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 337 HKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKH---GLLT---WPIRMNIAI 390
H N+V L ++ L LV+EF LH D K LT P+ +
Sbjct: 61 HPNIVKLLDVIHTENK-LYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 391 ETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGY 450
+ LA+ H+ ++HRD+K N+L+++ +K+ADFGL+R F + V T T Y
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVTLWY 169
Query: 451 VDPE-YHQCYQLTDKSDVYSFGVVLIELIS 479
PE C + D++S G + E+++
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 112/229 (48%), Gaps = 18/229 (7%)
Query: 281 TNDFSREKELGDGGFGTVYYGKLK-DGREVAVKRL--YDNNYRRVEQFMNEVEILTRLRH 337
++DF + LG+G +G V K G VA+K++ +D + + E++IL +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT-LREIKILKHFKH 68
Query: 338 KNLVSLFGCTSRYS-QGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASAL 396
+N++++F S + VY + + LH + L I+ I +T A+
Sbjct: 69 ENIITIFNIQRPDSFENFNEVY--IIQELMQTDLHRVISTQMLSDDHIQYFI-YQTLRAV 125
Query: 397 AYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLF---PLDVTHVSTAPQGTPGYVDP 453
LH S++IHRD+K +N+L++SN +KV DFGL+R+ D + + G YV
Sbjct: 126 KVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVAT 185
Query: 454 EYHQCYQLTDKS-------DVYSFGVVLIELISSMPAVDMNRHRHEINL 495
+++ ++ S DV+S G +L EL P +RH++ L
Sbjct: 186 RWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLL 234
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 100/202 (49%), Gaps = 9/202 (4%)
Query: 282 NDFSREKELGDGGFGTVYYGKLK-DGREVAVKRL-YDNNYRRV-EQFMNEVEILTRLRHK 338
+F + +++G+G +G VY + K G VA+K++ D V + E+ +L L H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 339 NLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAY 398
N+V L ++ L LV+EF+ + D + + P+ + + LA+
Sbjct: 67 NIVKLLDVIHTENK-LYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGLAF 122
Query: 399 LHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPE-YHQ 457
H+ ++HRD+K N+L+++ +K+ADFGL+R F + V T T Y PE
Sbjct: 123 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVTLWYRAPEILLG 181
Query: 458 CYQLTDKSDVYSFGVVLIELIS 479
C + D++S G + E+++
Sbjct: 182 CKYYSTAVDIWSLGCIFAEMVT 203
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 95/201 (47%), Gaps = 18/201 (8%)
Query: 290 LGDGGFGTVYYGKLKD---GREVAVKRLYDNNYRR--VEQFMNEVEILTRLRHKNLVSLF 344
LG G FG V K KD +E AVK + + + + EVE+L +L H N++ LF
Sbjct: 30 LGKGSFGEVL--KCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLF 87
Query: 345 GCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDI 404
S +V E G + D++ K + I + S + Y+H +I
Sbjct: 88 EILED-SSSFYIVGELYTGGELFDEI----IKRKRFSEHDAARIIKQVFSGITYMHKHNI 142
Query: 405 IHRDVKTNNILLDS---NFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQL 461
+HRD+K NILL+S + +K+ DFGLS F + GT Y+ PE +
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI--GTAYYIAPEVLRG-TY 199
Query: 462 TDKSDVYSFGVVLIELISSMP 482
+K DV+S GV+L L+S P
Sbjct: 200 DEKCDVWSAGVILYILLSGTP 220
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 95/201 (47%), Gaps = 18/201 (8%)
Query: 290 LGDGGFGTVYYGKLKD---GREVAVKRLYDNNYRR--VEQFMNEVEILTRLRHKNLVSLF 344
LG G FG V K KD +E AVK + + + + EVE+L +L H N++ LF
Sbjct: 30 LGKGSFGEVL--KCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLF 87
Query: 345 GCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDI 404
S +V E G + D++ K + I + S + Y+H +I
Sbjct: 88 EILED-SSSFYIVGELYTGGELFDEI----IKRKRFSEHDAARIIKQVFSGITYMHKHNI 142
Query: 405 IHRDVKTNNILLDS---NFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQL 461
+HRD+K NILL+S + +K+ DFGLS F + GT Y+ PE +
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI--GTAYYIAPEVLRG-TY 199
Query: 462 TDKSDVYSFGVVLIELISSMP 482
+K DV+S GV+L L+S P
Sbjct: 200 DEKCDVWSAGVILYILLSGTP 220
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 104/203 (51%), Gaps = 14/203 (6%)
Query: 284 FSREKELGDGGFGTVYYGKLKDGRE-VAVKR--LYDNNYRRVEQFMNEVEILTRLRHKNL 340
+ + +++G+G +GTV+ K ++ E VA+KR L D++ + E+ +L L+HKN+
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI 63
Query: 341 VSLFGCTSRYSQGLLLVYEFVANG--TVADQLHGDRAKHGLLTWPIRMNIAIETASALAY 398
V L + L LV+EF D +GD L I + + L +
Sbjct: 64 VRLHDVLHS-DKKLTLVFEFCDQDLKKYFDSCNGD------LDPEIVKSFLFQLLKGLGF 116
Query: 399 LHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQC 458
H+ +++HRD+K N+L++ N +K+ADFGL+R F + V +A T Y P+
Sbjct: 117 CHSRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPV-RCYSAEVVTLWYRPPDVLFG 175
Query: 459 YQLTDKS-DVYSFGVVLIELISS 480
+L S D++S G + EL ++
Sbjct: 176 AKLYSTSIDMWSAGCIFAELANA 198
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 107/210 (50%), Gaps = 12/210 (5%)
Query: 280 ATNDFSREKELGDGGFGTVYYGKLKD-GREVAVKRL-YDNNYRRVEQFMNEVEILTRLRH 337
+++ F + ++LG+G + TVY G K G VA+K + D+ + E+ ++ L+H
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIA----IETA 393
+N+V L+ ++ L LV+EF+ N + + D G + +N+ +
Sbjct: 63 ENIVRLYDVIHTENK-LTLVFEFMDNDL---KKYMDSRTVGNTPRGLELNLVKYFQWQLL 118
Query: 394 SALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDP 453
LA+ H + I+HRD+K N+L++ +K+ DFGL+R F + V S+ T Y P
Sbjct: 119 QGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV-TLWYRAP 177
Query: 454 EYHQCYQLTDKS-DVYSFGVVLIELISSMP 482
+ + S D++S G +L E+I+ P
Sbjct: 178 DVLMGSRTYSTSIDIWSCGCILAEMITGKP 207
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 97/204 (47%), Gaps = 12/204 (5%)
Query: 284 FSREKELGDGGFGTVYYGKLK-DGREVAVKRLYDNNYRRVEQFM-NEVEILTRLRHKNLV 341
F ++ LG G F V + K G+ AVK + + E + NE+ +L +++H+N+V
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIV 83
Query: 342 SLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHA 401
+L + L LV + V+ G + D++ + G T + + A+ YLH
Sbjct: 84 ALEDIYESPNH-LYLVMQLVSGGELFDRI----VEKGFYTEKDASTLIRQVLDAVYYLHR 138
Query: 402 SDIIHRDVKTNNILL---DSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQC 458
I+HRD+K N+L D + ++DFGLS++ V + GTPGYV PE
Sbjct: 139 MGIVHRDLKPENLLYYSQDEESKIMISDFGLSKM--EGKGDVMSTACGTPGYVAPEVLAQ 196
Query: 459 YQLTDKSDVYSFGVVLIELISSMP 482
+ D +S GV+ L+ P
Sbjct: 197 KPYSKAVDCWSIGVIAYILLCGYP 220
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 94/194 (48%), Gaps = 12/194 (6%)
Query: 290 LGDGGFGTVYYGKLK-DGREVAVKRLYDNNYRR---VEQFMNEVEILTRLRHKNLVSLFG 345
LG G FG V G+ + G +VAVK L R V + E++ L RH +++ L+
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 346 CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDII 405
S + +V E+V+ G + D + KHG + + + SA+ Y H ++
Sbjct: 79 VISTPTD-FFMVMEYVSGGELFDYI----CKHGRVEEMEARRLFQQILSAVDYCHRHMVV 133
Query: 406 HRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQLTD-K 464
HRD+K N+LLD++ K+ADFGLS + + G+P Y PE +
Sbjct: 134 HRDLKPENVLLDAHMNAKIADFGLSNM--MSDGEFLRDSCGSPNYAAPEVISGRLYAGPE 191
Query: 465 SDVYSFGVVLIELI 478
D++S GV+L L+
Sbjct: 192 VDIWSCGVILYALL 205
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 116/236 (49%), Gaps = 35/236 (14%)
Query: 258 TDLETGTVYFGVPIFSYSDLAEATNDFSREKELGDGGFGTVYYGKLKD-GREVAVKRLYD 316
DL T +YF ++ + +G+G +G V + KD GR VA+K+ +
Sbjct: 12 VDLGTENLYF-----------QSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLE 60
Query: 317 NNYRRVEQ--FMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDR 374
++ ++ + M E+++L +LRH+NLV+L + + LV+EFV + T+ D L +
Sbjct: 61 SDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKK-KKRWYLVFEFV-DHTILDDL--EL 116
Query: 375 AKHGLLTWPIRMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLF- 433
+GL + + + + + + H+ +IIHRD+K NIL+ + VK+ DFG +R
Sbjct: 117 FPNGL-DYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLA 175
Query: 434 -PLDV------THVSTAPQGTPGYVDPEYHQCYQLTDKSDVYSFGVVLIELISSMP 482
P +V T AP+ G D +Y + DV++ G ++ E+ P
Sbjct: 176 APGEVYDDEVATRWYRAPELLVG--DVKYGKA------VDVWAIGCLVTEMFMGEP 223
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 102/214 (47%), Gaps = 33/214 (15%)
Query: 287 EKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEIL--TRLRHKNLVSLF 344
++ +G G FG V+ GK + G EVAVK R + E EI LRH+N++
Sbjct: 8 QESIGKGRFGEVWRGKWR-GEEVAVKIFSSREER---SWFREAEIYQTVMLRHENILGFI 63
Query: 345 GCTSR----YSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
++ ++Q L LV ++ +G++ D L+ +T + +A+ TAS LA+LH
Sbjct: 64 AADNKDNGTWTQ-LWLVSDYHEHGSLFDYLN-----RYTVTVEGMIKLALSTASGLAHLH 117
Query: 401 AS--------DIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQ---GTPG 449
I HRD+K+ NIL+ N +AD GL+ + AP GT
Sbjct: 118 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 177
Query: 450 YVDPEY------HQCYQLTDKSDVYSFGVVLIEL 477
Y+ PE + ++ ++D+Y+ G+V E+
Sbjct: 178 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 118/261 (45%), Gaps = 40/261 (15%)
Query: 288 KELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMN-EVEILTRLRHKNLVSLFGC 346
K +G+G FG V+ KL + EVA+K++ + ++F N E++I+ ++H N+V L
Sbjct: 46 KVIGNGSFGVVFQAKLVESDEVAIKKVLQD-----KRFKNRELQIMRIVKHPNVVDLKAF 100
Query: 347 TSRYSQG-------LLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYL 399
YS G L LV E+V H + K + I++ + + +LAY+
Sbjct: 101 F--YSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYM-YQLLRSLAYI 157
Query: 400 HASDIIHRDVKTNNILLD-SNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEY-HQ 457
H+ I HRD+K N+LLD + +K+ DFG +++ +VS + Y PE
Sbjct: 158 HSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXI--CSRYYRAPELIFG 215
Query: 458 CYQLTDKSDVYSFGVVLIELISSMPAVDMNRHRHEINLANLAINKIQKCAFDELID--PC 515
T D++S G V+ EL+ P + D+L++
Sbjct: 216 ATNYTTNIDIWSTGCVMAELMQGQPLFP------------------GESGIDQLVEIIKV 257
Query: 516 LGFESDEEVKRMTTSVAELAF 536
LG S E++K M + E F
Sbjct: 258 LGTPSREQIKTMNPNYMEHKF 278
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 13/205 (6%)
Query: 282 NDFSREKELGDGGFGTVYYGK-LKDGREVAVKRLYDNN---YRRVEQFMNEVEILTRLRH 337
+ F R K LG G FG V K ++ G A+K L +++E +NE IL +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
LV L + + + L +V E+V G + L + G P A +
Sbjct: 101 PFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLR----RIGRFXEPHARFYAAQIVLTFE 155
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQ 457
YLH+ D+I+RD+K N+L+D ++V DFG ++ V + GTP Y+ PE
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIL 211
Query: 458 CYQLTDKSDVYSFGVVLIELISSMP 482
D ++ GV++ E+ + P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 13/205 (6%)
Query: 282 NDFSREKELGDGGFGTVYYGK-LKDGREVAVKRLYDNN---YRRVEQFMNEVEILTRLRH 337
+ F R K LG G FG V K ++ G A+K L +++E +NE IL +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
LV L + + + L +V E+V G + L + G P A +
Sbjct: 101 PFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLR----RIGRFXEPHARFYAAQIVLTFE 155
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQ 457
YLH+ D+I+RD+K N+L+D ++V DFG ++ V + GTP Y+ PE
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIL 211
Query: 458 CYQLTDKSDVYSFGVVLIELISSMP 482
D ++ GV++ E+ + P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 13/205 (6%)
Query: 282 NDFSREKELGDGGFGTVYYGK-LKDGREVAVKRLYDNN---YRRVEQFMNEVEILTRLRH 337
+ F R K LG G FG V K ++ G A+K L +++E +NE IL +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
LV L + + + L +V E+V G + L + G P A +
Sbjct: 102 PFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLR----RIGRFXEPHARFYAAQIVLTFE 156
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQ 457
YLH+ D+I+RD+K N+L+D ++V DFG ++ V + GTP Y+ PE
Sbjct: 157 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIL 212
Query: 458 CYQLTDKSDVYSFGVVLIELISSMP 482
D ++ GV++ E+ + P
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 102/214 (47%), Gaps = 33/214 (15%)
Query: 287 EKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEIL--TRLRHKNLVSLF 344
++ +G G FG V+ GK + G EVAVK R + E EI LRH+N++
Sbjct: 9 QESIGKGRFGEVWRGKWR-GEEVAVKIFSSREER---SWFREAEIYQTVMLRHENILGFI 64
Query: 345 GCTSR----YSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
++ ++Q L LV ++ +G++ D L+ +T + +A+ TAS LA+LH
Sbjct: 65 AADNKDNGTWTQ-LWLVSDYHEHGSLFDYLN-----RYTVTVEGMIKLALSTASGLAHLH 118
Query: 401 AS--------DIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQ---GTPG 449
I HRD+K+ NIL+ N +AD GL+ + AP GT
Sbjct: 119 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 178
Query: 450 YVDPEY------HQCYQLTDKSDVYSFGVVLIEL 477
Y+ PE + ++ ++D+Y+ G+V E+
Sbjct: 179 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 94/205 (45%), Gaps = 13/205 (6%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNN---YRRVEQFMNEVEILTRLRH 337
+ F R K LG G FG V K K+ G A+K L +++E +NE IL +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
LV L + + + L +V E+VA G + L + G + P A +
Sbjct: 101 PFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFE 155
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQ 457
YLH+ D+I+RD+K N+L+D ++V DFG ++ V + GTP + PE
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEALAPEIIL 211
Query: 458 CYQLTDKSDVYSFGVVLIELISSMP 482
D ++ GV++ E+ + P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 104/227 (45%), Gaps = 14/227 (6%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNL 340
NDFS + +G GGFG VY + D G+ A+K L + +R++ E L +L
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCL---DKKRIKMKQGETLALNERIMLSL 245
Query: 341 VSLFGCT----SRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASAL 396
VS C Y+ F+ + LH ++HG+ + A E L
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGL 305
Query: 397 AYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYH 456
++H +++RD+K NILLD + V+++D GL+ F H S GT GY+ PE
Sbjct: 306 EHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMAPEVL 362
Query: 457 QCYQLTDKS-DVYSFGVVLIELISSMPAVDMN--RHRHEINLANLAI 500
Q D S D +S G +L +L+ + + +HEI+ L +
Sbjct: 363 QKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM 409
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 102/214 (47%), Gaps = 33/214 (15%)
Query: 287 EKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEIL--TRLRHKNLVSLF 344
++ +G G FG V+ GK + G EVAVK R + E EI LRH+N++
Sbjct: 14 QESIGKGRFGEVWRGKWR-GEEVAVKIFSSREER---SWFREAEIYQTVMLRHENILGFI 69
Query: 345 GCTSR----YSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
++ ++Q L LV ++ +G++ D L+ +T + +A+ TAS LA+LH
Sbjct: 70 AADNKDNGTWTQ-LWLVSDYHEHGSLFDYLN-----RYTVTVEGMIKLALSTASGLAHLH 123
Query: 401 AS--------DIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQ---GTPG 449
I HRD+K+ NIL+ N +AD GL+ + AP GT
Sbjct: 124 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 183
Query: 450 YVDPEY------HQCYQLTDKSDVYSFGVVLIEL 477
Y+ PE + ++ ++D+Y+ G+V E+
Sbjct: 184 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 104/227 (45%), Gaps = 14/227 (6%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNL 340
NDFS + +G GGFG VY + D G+ A+K L + +R++ E L +L
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCL---DKKRIKMKQGETLALNERIMLSL 245
Query: 341 VSLFGCT----SRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASAL 396
VS C Y+ F+ + LH ++HG+ + A E L
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGL 305
Query: 397 AYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYH 456
++H +++RD+K NILLD + V+++D GL+ F H S GT GY+ PE
Sbjct: 306 EHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMAPEVL 362
Query: 457 QCYQLTDKS-DVYSFGVVLIELISSMPAVDMN--RHRHEINLANLAI 500
Q D S D +S G +L +L+ + + +HEI+ L +
Sbjct: 363 QKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM 409
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 104/227 (45%), Gaps = 14/227 (6%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNL 340
NDFS + +G GGFG VY + D G+ A+K L + +R++ E L +L
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCL---DKKRIKMKQGETLALNERIMLSL 245
Query: 341 VSLFGCT----SRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASAL 396
VS C Y+ F+ + LH ++HG+ + A E L
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGL 305
Query: 397 AYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYH 456
++H +++RD+K NILLD + V+++D GL+ F H S GT GY+ PE
Sbjct: 306 EHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMAPEVL 362
Query: 457 QCYQLTDKS-DVYSFGVVLIELISSMPAVDMN--RHRHEINLANLAI 500
Q D S D +S G +L +L+ + + +HEI+ L +
Sbjct: 363 QKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM 409
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 93/205 (45%), Gaps = 13/205 (6%)
Query: 282 NDFSREKELGDGGFGTVYYGK-LKDGREVAVKRLYDNN---YRRVEQFMNEVEILTRLRH 337
+ F R K LG G FG V K ++ G A+K L +++E +NE IL +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
LV L + + + L +V E+ G + L + G + P A +
Sbjct: 101 PFLVKL-EFSFKDNSNLYMVMEYAPGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFE 155
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQ 457
YLH+ D+I+RD+K N+++D +KV DFG ++ V + GTP Y+ PE
Sbjct: 156 YLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIL 211
Query: 458 CYQLTDKSDVYSFGVVLIELISSMP 482
D ++ GV++ E+ + P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 102/214 (47%), Gaps = 33/214 (15%)
Query: 287 EKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEIL--TRLRHKNLVSLF 344
++ +G G FG V+ GK + G EVAVK R + E EI LRH+N++
Sbjct: 11 QESIGKGRFGEVWRGKWR-GEEVAVKIFSSREER---SWFREAEIYQTVMLRHENILGFI 66
Query: 345 GCTSR----YSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
++ ++Q L LV ++ +G++ D L+ +T + +A+ TAS LA+LH
Sbjct: 67 AADNKDNGTWTQ-LWLVSDYHEHGSLFDYLN-----RYTVTVEGMIKLALSTASGLAHLH 120
Query: 401 AS--------DIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQ---GTPG 449
I HRD+K+ NIL+ N +AD GL+ + AP GT
Sbjct: 121 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 180
Query: 450 YVDPEY------HQCYQLTDKSDVYSFGVVLIEL 477
Y+ PE + ++ ++D+Y+ G+V E+
Sbjct: 181 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 104/227 (45%), Gaps = 14/227 (6%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNL 340
NDFS + +G GGFG VY + D G+ A+K L + +R++ E L +L
Sbjct: 188 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCL---DKKRIKMKQGETLALNERIMLSL 244
Query: 341 VSLFGCT----SRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASAL 396
VS C Y+ F+ + LH ++HG+ + A E L
Sbjct: 245 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGL 304
Query: 397 AYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYH 456
++H +++RD+K NILLD + V+++D GL+ F H S GT GY+ PE
Sbjct: 305 EHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMAPEVL 361
Query: 457 QCYQLTDKS-DVYSFGVVLIELISSMPAVDMN--RHRHEINLANLAI 500
Q D S D +S G +L +L+ + + +HEI+ L +
Sbjct: 362 QKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM 408
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 108/221 (48%), Gaps = 28/221 (12%)
Query: 282 NDFSREKELGDGGFGTVY------YGKLKDGREVAVKRLYDNNYR-RVEQFMNEVEILTR 334
N+ K LG G FG V GK +VAVK L + E M+E++I++
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 335 L-RHKNLVSLFG-CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLL-----------T 381
L +H+N+V+L G CT + +L++ E+ G D L+ R K +L T
Sbjct: 106 LGQHENIVNLLGACT--HGGPVLVITEYCCYG---DLLNFLRRKSRVLETDPAFAIANST 160
Query: 382 WPIR--MNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTH 439
R ++ + + A +A+L + + IHRDV N+LL + K+ DFGL+R D +
Sbjct: 161 LSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNY 220
Query: 440 VSTAPQGTP-GYVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
+ P ++ PE T +SDV+S+G++L E+ S
Sbjct: 221 IVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 107/221 (48%), Gaps = 26/221 (11%)
Query: 282 NDFSREKELGDGGFGTVY------YGKLKDGREVAVKRLYDNNYR-RVEQFMNEVEILTR 334
N+ K LG G FG V GK +VAVK L + E M+E++I++
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 335 L-RHKNLVSLFG-CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGL------------- 379
L +H+N+V+L G CT + +L++ E+ G + + L R GL
Sbjct: 106 LGQHENIVNLLGACT--HGGPVLVITEYCCYGDLLNFLRRKRPP-GLEYSYNPSHNPEEQ 162
Query: 380 LTWPIRMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTH 439
L+ ++ + + A +A+L + + IHRDV N+LL + K+ DFGL+R D +
Sbjct: 163 LSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNY 222
Query: 440 VSTAPQGTP-GYVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
+ P ++ PE T +SDV+S+G++L E+ S
Sbjct: 223 IVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 96/214 (44%), Gaps = 11/214 (5%)
Query: 282 NDFSREKELGDGGFGTVYYGKLK-DGREVAVKRLYDN---NYRRVEQFMNEVEILTRLRH 337
NDF K LG G FG V + K GR A+K L V + E +L RH
Sbjct: 8 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 67
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
L +L + + L V E+ G + L +R + T E SAL
Sbjct: 68 PFLTALKYAFQTHDR-LCFVMEYANGGELFFHLSRER----VFTEERARFYGAEIVSALE 122
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQ 457
YLH+ D+++RD+K N++LD + +K+ DFGL + D + T GTP Y+ PE +
Sbjct: 123 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC-GTPEYLAPEVLE 181
Query: 458 CYQLTDKSDVYSFGVVLIELI-SSMPAVDMNRHR 490
D + GVV+ E++ +P + + R
Sbjct: 182 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER 215
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 96/214 (44%), Gaps = 11/214 (5%)
Query: 282 NDFSREKELGDGGFGTVYYGKLK-DGREVAVKRLYDN---NYRRVEQFMNEVEILTRLRH 337
NDF K LG G FG V + K GR A+K L V + E +L RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
L +L + + L V E+ G + L +R + T E SAL
Sbjct: 65 PFLTALKYAFQTHDR-LCFVMEYANGGELFFHLSRER----VFTEERARFYGAEIVSALE 119
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQ 457
YLH+ D+++RD+K N++LD + +K+ DFGL + D + T GTP Y+ PE +
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC-GTPEYLAPEVLE 178
Query: 458 CYQLTDKSDVYSFGVVLIELI-SSMPAVDMNRHR 490
D + GVV+ E++ +P + + R
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER 212
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 96/214 (44%), Gaps = 11/214 (5%)
Query: 282 NDFSREKELGDGGFGTVYYGKLK-DGREVAVKRLYDN---NYRRVEQFMNEVEILTRLRH 337
NDF K LG G FG V + K GR A+K L V + E +L RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
L +L + + L V E+ G + L +R + T E SAL
Sbjct: 65 PFLTALKYAFQTHDR-LCFVMEYANGGELFFHLSRER----VFTEERARFYGAEIVSALE 119
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQ 457
YLH+ D+++RD+K N++LD + +K+ DFGL + D + T GTP Y+ PE +
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC-GTPEYLAPEVLE 178
Query: 458 CYQLTDKSDVYSFGVVLIELI-SSMPAVDMNRHR 490
D + GVV+ E++ +P + + R
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER 212
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 121/275 (44%), Gaps = 36/275 (13%)
Query: 289 ELGDGGFGTVYYG-KLKDGREVAVKRLYDNNYRRVEQ--FMNEVEILTRLRHKNLVSLFG 345
E+G G F TVY G + EVA L D + E+ F E E L L+H N+V +
Sbjct: 33 EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYD 92
Query: 346 CTSRYSQG---LLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHAS 402
+G ++LV E +GT+ L + + + + + L +LH
Sbjct: 93 SWESTVKGKKCIVLVTELXTSGTLKTYLK----RFKVXKIKVLRSWCRQILKGLQFLHTR 148
Query: 403 D--IIHRDVKTNNILLDS-NFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPE-YHQC 458
IIHRD+K +NI + VK+ D GL+ L + A GTP + PE Y +
Sbjct: 149 TPPIIHRDLKCDNIFITGPTGSVKIGDLGLA---TLKRASFAKAVIGTPEFXAPEXYEEK 205
Query: 459 YQLTDKSDVYSFGVVLIELISSMPAVDMNRHRHEINLANLAINKIQKCAFDELIDPCLGF 518
Y + DVY+FG +E +S + ++ + + ++ +FD++ P
Sbjct: 206 YD--ESVDVYAFGXCXLEXATS--EYPYSECQNAAQIYRRVTSGVKPASFDKVAIP---- 257
Query: 519 ESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVL 553
V E+ C++QNK+ R S++++L
Sbjct: 258 -----------EVKEIIEGCIRQNKDERYSIKDLL 281
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 94/201 (46%), Gaps = 9/201 (4%)
Query: 284 FSREKELGDGGFGTVYYGKLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLV 341
F++ +++G G FG V+ G ++V ++ D +E E+ +L++ +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 342 SLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHA 401
+G + ++ L ++ E++ G+ D L + G L I E L YLH+
Sbjct: 84 KYYGSYLKDTK-LWIIMEYLGGGSALDLL-----EPGPLDETQIATILREILKGLDYLHS 137
Query: 402 SDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQL 461
IHRD+K N+LL + VK+ADFG++ D GTP ++ PE +
Sbjct: 138 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQL-TDTQIKRNXFVGTPFWMAPEVIKQSAY 196
Query: 462 TDKSDVYSFGVVLIELISSMP 482
K+D++S G+ IEL P
Sbjct: 197 DSKADIWSLGITAIELARGEP 217
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 93/205 (45%), Gaps = 13/205 (6%)
Query: 282 NDFSREKELGDGGFGTVYYGK-LKDGREVAVKRLYDNN---YRRVEQFMNEVEILTRLRH 337
+ F R K LG G FG V K ++ G A+K L + +E +NE IL +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
LV L + + + L +V E+ G + L + G + P A +
Sbjct: 101 PFLVKL-EFSFKDNSNLYMVMEYAPGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFE 155
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQ 457
YLH+ D+I+RD+K N+++D ++V DFGL++ V + GTP Y+ PE
Sbjct: 156 YLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAK----RVKGRTWXLCGTPEYLAPEIIL 211
Query: 458 CYQLTDKSDVYSFGVVLIELISSMP 482
D ++ GV++ E+ + P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 13/205 (6%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNN---YRRVEQFMNEVEILTRLRH 337
+ F R + LG G FG V K K+ G A+K L +++E +NE I +
Sbjct: 42 DQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNF 101
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
LV L + + + L +V E+ G + L + G + P A +
Sbjct: 102 PFLVKL-EFSFKDNSNLYMVLEYAPGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFE 156
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQ 457
YLH+ D+I+RD+K N+L+D +KVADFG ++ V + GTP Y+ PE
Sbjct: 157 YLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAK----RVKGRTWXLCGTPEYLAPEIIL 212
Query: 458 CYQLTDKSDVYSFGVVLIELISSMP 482
D ++ GV++ E+ + P
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 103/226 (45%), Gaps = 24/226 (10%)
Query: 273 SYSDLAEAT-NDFSREKELGDGGFGTVYYGKLK------DGREVAVKRLYDNNYRRVE-Q 324
S SDL E + + + LG G FG VY G++ +VAVK L + + E
Sbjct: 35 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 94
Query: 325 FMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDR---AKHGLLT 381
F+ E I+++L H+N+V G S S ++ E +A G + L R ++ L
Sbjct: 95 FLMEALIISKLNHQNIVRCIG-VSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLA 153
Query: 382 WPIRMNIAIETASALAYLHASDIIHRDVKTNNILL---DSNFCVKVADFGLSRLFPLDVT 438
+++A + A YL + IHRD+ N LL K+ DFG++R D+
Sbjct: 154 MLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIY 209
Query: 439 HVSTAPQGTPG-----YVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
S +G ++ PE T K+D +SFGV+L E+ S
Sbjct: 210 RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 103/226 (45%), Gaps = 24/226 (10%)
Query: 273 SYSDLAEAT-NDFSREKELGDGGFGTVYYGKLK------DGREVAVKRLYDNNYRRVE-Q 324
S SDL E + + + LG G FG VY G++ +VAVK L + + E
Sbjct: 21 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 80
Query: 325 FMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDR---AKHGLLT 381
F+ E I+++L H+N+V G S S ++ E +A G + L R ++ L
Sbjct: 81 FLMEALIISKLNHQNIVRCIG-VSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLA 139
Query: 382 WPIRMNIAIETASALAYLHASDIIHRDVKTNNILL---DSNFCVKVADFGLSRLFPLDVT 438
+++A + A YL + IHRD+ N LL K+ DFG++R D+
Sbjct: 140 MLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIY 195
Query: 439 HVSTAPQGTPG-----YVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
S +G ++ PE T K+D +SFGV+L E+ S
Sbjct: 196 RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 92/205 (44%), Gaps = 13/205 (6%)
Query: 282 NDFSREKELGDGGFGTVYYGK-LKDGREVAVKRLYDNN---YRRVEQFMNEVEILTRLRH 337
+ F R K LG G FG V K ++ G A+K L +++E +NE IL +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
LV L + + + L +V E+ G + L + G P A +
Sbjct: 101 PFLVKL-EFSFKDNSNLYMVMEYAPGGEMFSHLR----RIGRFXEPHARFYAAQIVLTFE 155
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQ 457
YLH+ D+I+RD+K N+++D +KV DFG ++ V + GTP Y+ PE
Sbjct: 156 YLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIL 211
Query: 458 CYQLTDKSDVYSFGVVLIELISSMP 482
D ++ GV++ E+ + P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 94/199 (47%), Gaps = 11/199 (5%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRV--EQFMNEVEILTRLRHKN 339
+DF + ELG G G V+ K V ++L + Q + E+++L
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 127
Query: 340 LVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYL 399
+V +G YS G + + +G DQ+ K G + I ++I L YL
Sbjct: 128 IVGFYGAF--YSDGEISICMEHMDGGSLDQV---LKKAGRIPEQILGKVSIAVIKGLTYL 182
Query: 400 HAS-DIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQC 458
I+HRDVK +NIL++S +K+ DFG+S + ++ + GT Y+ PE Q
Sbjct: 183 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL---IDSMANSFVGTRSYMSPERLQG 239
Query: 459 YQLTDKSDVYSFGVVLIEL 477
+ +SD++S G+ L+E+
Sbjct: 240 THYSVQSDIWSMGLSLVEM 258
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 101/204 (49%), Gaps = 9/204 (4%)
Query: 280 ATNDFSREKELGDGGFGTVYYGKLK-DGREVAVKRL-YDNNYRRV-EQFMNEVEILTRLR 336
+ +F + +++G+G +G VY + K G VA+K++ D V + E+ +L L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 337 HKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASAL 396
H N+V L ++ L LV+EF++ + D + + P+ + + L
Sbjct: 64 HPNIVKLLDVIHTENK-LYLVFEFLSMDL---KKFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 397 AYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPE-Y 455
A+ H+ ++HRD+K N+L+++ +K+ADFGL+R F + V T Y PE
Sbjct: 120 AFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPV-RTYXHEVVTLWYRAPEIL 178
Query: 456 HQCYQLTDKSDVYSFGVVLIELIS 479
C + D++S G + E+++
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 103/204 (50%), Gaps = 9/204 (4%)
Query: 280 ATNDFSREKELGDGGFGTVYYGKLK-DGREVAVKRL-YDNNYRRV-EQFMNEVEILTRLR 336
+ +F + +++G+G +G VY + K G VA+K++ D V + E+ +L L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 337 HKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASAL 396
H N+V L ++ L LV+EF++ + D + D + + P+ + + L
Sbjct: 63 HPNIVKLLDVIHTENK-LYLVFEFLSMD-LKDFM--DASALTGIPLPLIKSYLFQLLQGL 118
Query: 397 AYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPE-Y 455
A+ H+ ++HRD+K N+L+++ +K+ADFGL+R F + V T Y PE
Sbjct: 119 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHEVVTLWYRAPEIL 177
Query: 456 HQCYQLTDKSDVYSFGVVLIELIS 479
C + D++S G + E+++
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 100/201 (49%), Gaps = 9/201 (4%)
Query: 283 DFSREKELGDGGFGTVYYGKLK-DGREVAVKRL-YDNNYRRV-EQFMNEVEILTRLRHKN 339
+F + +++G+G +G VY + K G VA+K++ D V + E+ +L L H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 340 LVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYL 399
+V L ++ L LV+EF+ + D + + P+ + + L++
Sbjct: 64 IVKLLDVIHTENK-LYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGLSFC 119
Query: 400 HASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPE-YHQC 458
H+ ++HRD+K N+L+++ +K+ADFGL+R F + V T T Y PE C
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVTLWYRAPEILLGC 178
Query: 459 YQLTDKSDVYSFGVVLIELIS 479
+ D++S G + E+++
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVT 199
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 94/201 (46%), Gaps = 9/201 (4%)
Query: 284 FSREKELGDGGFGTVYYGKLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLV 341
F++ +++G G FG V+ G ++V ++ D +E E+ +L++ +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 342 SLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHA 401
+G + ++ L ++ E++ G+ D L + G L I E L YLH+
Sbjct: 69 KYYGSYLKDTK-LWIIMEYLGGGSALDLL-----EPGPLDETQIATILREILKGLDYLHS 122
Query: 402 SDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQL 461
IHRD+K N+LL + VK+ADFG++ D GTP ++ PE +
Sbjct: 123 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQL-TDTQIKRNTFVGTPFWMAPEVIKQSAY 181
Query: 462 TDKSDVYSFGVVLIELISSMP 482
K+D++S G+ IEL P
Sbjct: 182 DSKADIWSLGITAIELARGEP 202
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 99/201 (49%), Gaps = 9/201 (4%)
Query: 283 DFSREKELGDGGFGTVYYGKLK-DGREVAVKRL-YDNNYRRV-EQFMNEVEILTRLRHKN 339
+F + +++G+G +G VY + K G VA+K++ D V + E+ +L L H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 340 LVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYL 399
+V L ++ L LV+E V + D + + P+ + + LA+
Sbjct: 63 IVKLLDVIHTENK-LYLVFEHVHQDL---KTFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 400 HASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPE-YHQC 458
H+ ++HRD+K N+L+++ +K+ADFGL+R F + V T T Y PE C
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVTLWYRAPEILLGC 177
Query: 459 YQLTDKSDVYSFGVVLIELIS 479
+ D++S G + E+++
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVT 198
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 101/204 (49%), Gaps = 9/204 (4%)
Query: 280 ATNDFSREKELGDGGFGTVYYGKLK-DGREVAVKRL-YDNNYRRV-EQFMNEVEILTRLR 336
+ +F + +++G+G +G VY + K G VA+K++ D V + E+ +L L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 337 HKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASAL 396
H N+V L ++ L LV+EF++ + D + + P+ + + L
Sbjct: 62 HPNIVKLLDVIHTENK-LYLVFEFLSMDL---KKFMDASALTGIPLPLIKSYLFQLLQGL 117
Query: 397 AYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPE-Y 455
A+ H+ ++HRD+K N+L+++ +K+ADFGL+R F + V T Y PE
Sbjct: 118 AFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPV-RTYXHEVVTLWYRAPEIL 176
Query: 456 HQCYQLTDKSDVYSFGVVLIELIS 479
C + D++S G + E+++
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 100/204 (49%), Gaps = 9/204 (4%)
Query: 280 ATNDFSREKELGDGGFGTVYYGKLK-DGREVAVKRL-YDNNYRRV-EQFMNEVEILTRLR 336
+ +F + +++G+G +G VY + K G VA+K++ D V + E+ +L L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 337 HKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASAL 396
H N+V L ++ L LV+EF+ + D + + P+ + + L
Sbjct: 64 HPNIVKLLDVIHTENK-LYLVFEFLHQDL---KTFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 397 AYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPE-Y 455
A+ H+ ++HRD+K N+L+++ +K+ADFGL+R F + V T Y PE
Sbjct: 120 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHEVVTLWYRAPEIL 178
Query: 456 HQCYQLTDKSDVYSFGVVLIELIS 479
C + D++S G + E+++
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 103/204 (50%), Gaps = 9/204 (4%)
Query: 280 ATNDFSREKELGDGGFGTVYYGKLK-DGREVAVKRL-YDNNYRRV-EQFMNEVEILTRLR 336
+ +F + +++G+G +G VY + K G VA+K++ D V + E+ +L L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 337 HKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASAL 396
H N+V L ++ L LV+EF++ + D + D + + P+ + + L
Sbjct: 64 HPNIVKLLDVIHTENK-LYLVFEFLSMD-LKDFM--DASALTGIPLPLIKSYLFQLLQGL 119
Query: 397 AYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPE-Y 455
A+ H+ ++HRD+K N+L+++ +K+ADFGL+R F + V T Y PE
Sbjct: 120 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHEVVTLWYRAPEIL 178
Query: 456 HQCYQLTDKSDVYSFGVVLIELIS 479
C + D++S G + E+++
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 102/209 (48%), Gaps = 15/209 (7%)
Query: 281 TNDFSREKELGDGGFGTVYYGKLK-DGREVAVKRLYDNNYRRVEQ---FMNEVEILTRLR 336
++ + R K+LG G +G V K K G E A+K + ++ ++EV +L +L
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 79
Query: 337 HKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASAL 396
H N++ L+ + LV E G + D++ R K + + M + S
Sbjct: 80 HPNIMKLYEFFED-KRNYYLVMEVYRGGELFDEII-LRQKFSEVDAAVIMK---QVLSGT 134
Query: 397 AYLHASDIIHRDVKTNNILLDS---NFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDP 453
YLH +I+HRD+K N+LL+S + +K+ DFGLS F +V GT Y+ P
Sbjct: 135 TYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF--EVGGKMKERLGTAYYIAP 192
Query: 454 EYHQCYQLTDKSDVYSFGVVLIELISSMP 482
E + + +K DV+S GV+L L+ P
Sbjct: 193 EVLRK-KYDEKCDVWSCGVILYILLCGYP 220
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 103/204 (50%), Gaps = 9/204 (4%)
Query: 280 ATNDFSREKELGDGGFGTVYYGKLK-DGREVAVKRL-YDNNYRRV-EQFMNEVEILTRLR 336
+ +F + +++G+G +G VY + K G VA+K++ D V + E+ +L L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 337 HKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASAL 396
H N+V L ++ L LV+EF+ + + D + D + + P+ + + L
Sbjct: 61 HPNIVKLLDVIHTENK-LYLVFEFL-HQDLKDFM--DASALTGIPLPLIKSYLFQLLQGL 116
Query: 397 AYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPE-Y 455
A+ H+ ++HRD+K N+L+++ +K+ADFGL+R F + V T Y PE
Sbjct: 117 AFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPV-RTYXHEVVTLWYRAPEIL 175
Query: 456 HQCYQLTDKSDVYSFGVVLIELIS 479
C + D++S G + E+++
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 94/201 (46%), Gaps = 9/201 (4%)
Query: 284 FSREKELGDGGFGTVYYGKLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLV 341
F++ +++G G FG V+ G ++V ++ D +E E+ +L++ +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 342 SLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHA 401
+G + ++ L ++ E++ G+ D L + G L I E L YLH+
Sbjct: 69 KYYGSYLKDTK-LWIIMEYLGGGSALDLL-----EPGPLDETQIATILREILKGLDYLHS 122
Query: 402 SDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQL 461
IHRD+K N+LL + VK+ADFG++ D GTP ++ PE +
Sbjct: 123 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQL-TDTQIKRNXFVGTPFWMAPEVIKQSAY 181
Query: 462 TDKSDVYSFGVVLIELISSMP 482
K+D++S G+ IEL P
Sbjct: 182 DSKADIWSLGITAIELARGEP 202
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 102/210 (48%), Gaps = 17/210 (8%)
Query: 281 TNDFSREKELGDGGFGTVYYGKLK-DGREVAVKRLYDNNYRRV---EQFMNEVEILTRLR 336
++ + ++ LG G FG V K K G+E AVK + ++ E + EV++L +L
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 337 HKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASAL 396
H N++ L+ LV E G + D++ + + I + S +
Sbjct: 85 HPNIMKLYEFFEDKGY-FYLVGEVYTGGELFDEIISRKR----FSEVDAARIIRQVLSGI 139
Query: 397 AYLHASDIIHRDVKTNNILLDS---NFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDP 453
Y+H + I+HRD+K N+LL+S + +++ DFGLS F + + GT Y+ P
Sbjct: 140 TYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF--EASKKMKDKIGTAYYIAP 197
Query: 454 E-YHQCYQLTDKSDVYSFGVVLIELISSMP 482
E H Y +K DV+S GV+L L+S P
Sbjct: 198 EVLHGTYD--EKCDVWSTGVILYILLSGCP 225
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 100/204 (49%), Gaps = 9/204 (4%)
Query: 280 ATNDFSREKELGDGGFGTVYYGKLK-DGREVAVKRL-YDNNYRRV-EQFMNEVEILTRLR 336
+ +F + +++G+G +G VY + K G VA+K++ D V + E+ +L L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 337 HKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASAL 396
H N+V L ++ L LV+EF+ + D + + P+ + + L
Sbjct: 61 HPNIVKLLDVIHTENK-LYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 397 AYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPE-Y 455
A+ H+ ++HRD+K N+L+++ +K+ADFGL+R F + V T Y PE
Sbjct: 117 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHEVVTLWYRAPEIL 175
Query: 456 HQCYQLTDKSDVYSFGVVLIELIS 479
C + D++S G + E+++
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 112/229 (48%), Gaps = 18/229 (7%)
Query: 281 TNDFSREKELGDGGFGTVYYGKLK-DGREVAVKRL--YDNNYRRVEQFMNEVEILTRLRH 337
++DF + LG+G +G V K G VA+K++ +D + + E++IL +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT-LREIKILKHFKH 68
Query: 338 KNLVSLFGCTSRYS-QGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASAL 396
+N++++F S + VY + + LH + L I+ I +T A+
Sbjct: 69 ENIITIFNIQRPDSFENFNEVY--IIQELMQTDLHRVISTQMLSDDHIQYFI-YQTLRAV 125
Query: 397 AYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLF---PLDVTHVSTAPQGTPGYVDP 453
LH S++IHRD+K +N+L++SN +KV DFGL+R+ D + + G +V
Sbjct: 126 KVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVAT 185
Query: 454 EYHQCYQLTDKS-------DVYSFGVVLIELISSMPAVDMNRHRHEINL 495
+++ ++ S DV+S G +L EL P +RH++ L
Sbjct: 186 RWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLL 234
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 100/204 (49%), Gaps = 9/204 (4%)
Query: 280 ATNDFSREKELGDGGFGTVYYGKLK-DGREVAVKRL-YDNNYRRV-EQFMNEVEILTRLR 336
+ +F + +++G+G +G VY + K G VA+K++ D V + E+ +L L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 337 HKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASAL 396
H N+V L ++ L LV+EF+ + D + + P+ + + L
Sbjct: 64 HPNIVKLLDVIHTENK-LYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 397 AYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPE-Y 455
A+ H+ ++HRD+K N+L+++ +K+ADFGL+R F + V T Y PE
Sbjct: 120 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHEVVTLWYRAPEIL 178
Query: 456 HQCYQLTDKSDVYSFGVVLIELIS 479
C + D++S G + E+++
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 100/204 (49%), Gaps = 9/204 (4%)
Query: 280 ATNDFSREKELGDGGFGTVYYGKLK-DGREVAVKRL-YDNNYRRV-EQFMNEVEILTRLR 336
+ +F + +++G+G +G VY + K G VA+K++ D V + E+ +L L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 337 HKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASAL 396
H N+V L ++ L LV+EF+ + D + + P+ + + L
Sbjct: 63 HPNIVKLLDVIHTENK-LYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGL 118
Query: 397 AYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPE-Y 455
A+ H+ ++HRD+K N+L+++ +K+ADFGL+R F + V T Y PE
Sbjct: 119 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHEVVTLWYRAPEIL 177
Query: 456 HQCYQLTDKSDVYSFGVVLIELIS 479
C + D++S G + E+++
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 100/204 (49%), Gaps = 9/204 (4%)
Query: 280 ATNDFSREKELGDGGFGTVYYGKLK-DGREVAVKRL-YDNNYRRV-EQFMNEVEILTRLR 336
+ +F + +++G+G +G VY + K G VA+K++ D V + E+ +L L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 337 HKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASAL 396
H N+V L ++ L LV+EF+ + D + + P+ + + L
Sbjct: 61 HPNIVKLLDVIHTENK-LYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 397 AYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPE-Y 455
A+ H+ ++HRD+K N+L+++ +K+ADFGL+R F + V T Y PE
Sbjct: 117 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHEVVTLWYRAPEIL 175
Query: 456 HQCYQLTDKSDVYSFGVVLIELIS 479
C + D++S G + E+++
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 102/210 (48%), Gaps = 17/210 (8%)
Query: 281 TNDFSREKELGDGGFGTVYYGKLK-DGREVAVKRLYDNNYRRV---EQFMNEVEILTRLR 336
++ + ++ LG G FG V K K G+E AVK + ++ E + EV++L +L
Sbjct: 48 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 107
Query: 337 HKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASAL 396
H N++ L+ LV E G + D++ + + I + S +
Sbjct: 108 HPNIMKLYEFFEDKGY-FYLVGEVYTGGELFDEIISRKR----FSEVDAARIIRQVLSGI 162
Query: 397 AYLHASDIIHRDVKTNNILLDS---NFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDP 453
Y+H + I+HRD+K N+LL+S + +++ DFGLS F + + GT Y+ P
Sbjct: 163 TYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF--EASKKMKDKIGTAYYIAP 220
Query: 454 E-YHQCYQLTDKSDVYSFGVVLIELISSMP 482
E H Y +K DV+S GV+L L+S P
Sbjct: 221 EVLHGTYD--EKCDVWSTGVILYILLSGCP 248
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 100/204 (49%), Gaps = 9/204 (4%)
Query: 280 ATNDFSREKELGDGGFGTVYYGKLK-DGREVAVKRL-YDNNYRRV-EQFMNEVEILTRLR 336
+ +F + +++G+G +G VY + K G VA+K++ D V + E+ +L L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 337 HKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASAL 396
H N+V L ++ L LV+EF+ + D + + P+ + + L
Sbjct: 63 HPNIVKLLDVIHTENK-LYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGL 118
Query: 397 AYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPE-Y 455
A+ H+ ++HRD+K N+L+++ +K+ADFGL+R F + V T Y PE
Sbjct: 119 AFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPV-RTYXHEVVTLWYRAPEIL 177
Query: 456 HQCYQLTDKSDVYSFGVVLIELIS 479
C + D++S G + E+++
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 102/211 (48%), Gaps = 21/211 (9%)
Query: 279 EATNDFSREKELGDGGFGTVYYGKLK-DGREVAVKRL-YDNNYRRV-EQFMNEVEILTRL 335
E +F + +++G+G +G VY + K G VA+K++ D V + E+ +L L
Sbjct: 7 EFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 66
Query: 336 RHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKH---GLLT---WPIRMNIA 389
H N+V L ++ L LV+EF LH D K LT P+ +
Sbjct: 67 NHPNIVKLLDVIHTENK-LYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYL 116
Query: 390 IETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPG 449
+ LA+ H+ ++HRD+K N+L+++ +K+ADFGL+R F + V T T
Sbjct: 117 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVTLW 175
Query: 450 YVDPEYHQCYQLTDKS-DVYSFGVVLIELIS 479
Y PE + + D++S G + E+++
Sbjct: 176 YRAPEILLGXKYYSTAVDIWSLGCIFAEMVT 206
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 100/204 (49%), Gaps = 9/204 (4%)
Query: 280 ATNDFSREKELGDGGFGTVYYGKLK-DGREVAVKRL-YDNNYRRV-EQFMNEVEILTRLR 336
+ +F + +++G+G +G VY + K G VA+K++ D V + E+ +L L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 337 HKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASAL 396
H N+V L ++ L LV+EF+ + D + + P+ + + L
Sbjct: 63 HPNIVKLLDVIHTENK-LYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGL 118
Query: 397 AYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPE-Y 455
A+ H+ ++HRD+K N+L+++ +K+ADFGL+R F + V T Y PE
Sbjct: 119 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHEVVTLWYRAPEIL 177
Query: 456 HQCYQLTDKSDVYSFGVVLIELIS 479
C + D++S G + E+++
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 94/201 (46%), Gaps = 9/201 (4%)
Query: 284 FSREKELGDGGFGTVYYGKLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLV 341
F++ +++G G FG V+ G ++V ++ D +E E+ +L++ +
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 342 SLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHA 401
+G + ++ L ++ E++ G+ D L + G L I E L YLH+
Sbjct: 89 KYYGSYLKDTK-LWIIMEYLGGGSALDLL-----EPGPLDETQIATILREILKGLDYLHS 142
Query: 402 SDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQL 461
IHRD+K N+LL + VK+ADFG++ D GTP ++ PE +
Sbjct: 143 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQL-TDTQIKRNTFVGTPFWMAPEVIKQSAY 201
Query: 462 TDKSDVYSFGVVLIELISSMP 482
K+D++S G+ IEL P
Sbjct: 202 DSKADIWSLGITAIELARGEP 222
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 99/226 (43%), Gaps = 33/226 (14%)
Query: 281 TNDFSREKELGDGGFGTVYYGK-LKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKN 339
+DF LG G FG V + D R A+K++ + ++ ++EV +L L H+
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASLNHQY 63
Query: 340 LVSLFGC------------TSRYSQGLLLVYEFVANGTVADQLHGDRAKHGL-LTWPIRM 386
+V + + L + E+ N T+ D +H + W +
Sbjct: 64 VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFR 123
Query: 387 NIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSR-------LFPLDVTH 439
I AL+Y+H+ IIHRD+K NI +D + VK+ DFGL++ + LD +
Sbjct: 124 QIL----EALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 440 VS------TAPQGTPGYVDPE-YHQCYQLTDKSDVYSFGVVLIELI 478
+ T+ GT YV E +K D+YS G++ E+I
Sbjct: 180 LPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 100/204 (49%), Gaps = 9/204 (4%)
Query: 280 ATNDFSREKELGDGGFGTVYYGKLK-DGREVAVKRL-YDNNYRRV-EQFMNEVEILTRLR 336
+ +F + +++G+G +G VY + K G VA+K++ D V + E+ +L L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 337 HKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASAL 396
H N+V L ++ L LV+EF+ + D + + P+ + + L
Sbjct: 61 HPNIVKLLDVIHTENK-LYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 397 AYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPE-Y 455
A+ H+ ++HRD+K N+L+++ +K+ADFGL+R F + V T Y PE
Sbjct: 117 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHEVVTLWYRAPEIL 175
Query: 456 HQCYQLTDKSDVYSFGVVLIELIS 479
C + D++S G + E+++
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 21/210 (10%)
Query: 280 ATNDFSREKELGDGGFGTVYYGKLK-DGREVAVKRL-YDNNYRRV-EQFMNEVEILTRLR 336
+ +F + +++G+G +G VY + K G VA+K++ D V + E+ +L L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 337 HKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKH---GLLT---WPIRMNIAI 390
H N+V L ++ L LV+EF LH D K LT P+ +
Sbjct: 62 HPNIVKLLDVIHTENK-LYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLF 111
Query: 391 ETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGY 450
+ LA+ H+ ++HRD+K N+L+++ +K+ADFGL+R F + V T Y
Sbjct: 112 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHEVVTLWY 170
Query: 451 VDPE-YHQCYQLTDKSDVYSFGVVLIELIS 479
PE C + D++S G + E+++
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 21/210 (10%)
Query: 280 ATNDFSREKELGDGGFGTVYYGKLK-DGREVAVKRL-YDNNYRRV-EQFMNEVEILTRLR 336
+ +F + +++G+G +G VY + K G VA+K++ D V + E+ +L L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 337 HKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKH---GLLT---WPIRMNIAI 390
H N+V L ++ L LV+EF LH D K LT P+ +
Sbjct: 61 HPNIVKLLDVIHTENK-LYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 391 ETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGY 450
+ LA+ H+ ++HRD+K N+L+++ +K+ADFGL+R F + V T Y
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHEVVTLWY 169
Query: 451 VDPE-YHQCYQLTDKSDVYSFGVVLIELIS 479
PE C + D++S G + E+++
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 100/204 (49%), Gaps = 9/204 (4%)
Query: 280 ATNDFSREKELGDGGFGTVYYGKLK-DGREVAVKRL-YDNNYRRV-EQFMNEVEILTRLR 336
+ +F + +++G+G +G VY + K G VA+K++ D V + E+ +L L
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 337 HKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASAL 396
H N+V L ++ L LV+EF+ + D + + P+ + + L
Sbjct: 65 HPNIVKLLDVIHTENK-LYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGL 120
Query: 397 AYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPE-Y 455
A+ H+ ++HRD+K N+L+++ +K+ADFGL+R F + V T Y PE
Sbjct: 121 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHEVVTLWYRAPEIL 179
Query: 456 HQCYQLTDKSDVYSFGVVLIELIS 479
C + D++S G + E+++
Sbjct: 180 LGCKYYSTAVDIWSLGCIFAEMVT 203
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 102/210 (48%), Gaps = 17/210 (8%)
Query: 281 TNDFSREKELGDGGFGTVYYGKLK-DGREVAVKRLYDNNYRRV---EQFMNEVEILTRLR 336
++ + ++ LG G FG V K K G+E AVK + ++ E + EV++L +L
Sbjct: 49 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 108
Query: 337 HKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASAL 396
H N++ L+ LV E G + D++ + + I + S +
Sbjct: 109 HPNIMKLYEFFEDKGY-FYLVGEVYTGGELFDEIISRKR----FSEVDAARIIRQVLSGI 163
Query: 397 AYLHASDIIHRDVKTNNILLDS---NFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDP 453
Y+H + I+HRD+K N+LL+S + +++ DFGLS F + + GT Y+ P
Sbjct: 164 TYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF--EASKKMKDKIGTAYYIAP 221
Query: 454 E-YHQCYQLTDKSDVYSFGVVLIELISSMP 482
E H Y +K DV+S GV+L L+S P
Sbjct: 222 EVLHGTYD--EKCDVWSTGVILYILLSGCP 249
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 94/199 (47%), Gaps = 11/199 (5%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRV--EQFMNEVEILTRLRHKN 339
+DF + ELG G G V+ K V ++L + Q + E+++L
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 340 LVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYL 399
+V +G YS G + + +G DQ+ K G + I ++I L YL
Sbjct: 66 IVGFYGAF--YSDGEISICMEHMDGGSLDQV---LKKAGRIPEQILGKVSIAVIKGLTYL 120
Query: 400 HAS-DIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQC 458
I+HRDVK +NIL++S +K+ DFG+S + ++ + GT Y+ PE Q
Sbjct: 121 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL---IDSMANSFVGTRSYMSPERLQG 177
Query: 459 YQLTDKSDVYSFGVVLIEL 477
+ +SD++S G+ L+E+
Sbjct: 178 THYSVQSDIWSMGLSLVEM 196
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 100/204 (49%), Gaps = 9/204 (4%)
Query: 280 ATNDFSREKELGDGGFGTVYYGKLK-DGREVAVKRL-YDNNYRRV-EQFMNEVEILTRLR 336
+ +F + +++G+G +G VY + K G VA+K++ D V + E+ +L L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 337 HKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASAL 396
H N+V L ++ L LV+EF+ + D + + P+ + + L
Sbjct: 64 HPNIVKLLDVIHTENK-LYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 397 AYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPE-Y 455
A+ H+ ++HRD+K N+L+++ +K+ADFGL+R F + V T Y PE
Sbjct: 120 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHEVVTLWYRAPEIL 178
Query: 456 HQCYQLTDKSDVYSFGVVLIELIS 479
C + D++S G + E+++
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 101/212 (47%), Gaps = 26/212 (12%)
Query: 293 GGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQ 352
G FG V+ +L + VAVK ++ ++ Q EV L ++H+N++ G R +
Sbjct: 35 GRFGCVWKAQLLN-EYVAVK-IFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTS 92
Query: 353 ---GLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHAS------- 402
L L+ F G+++D L K +++W +IA A LAYLH
Sbjct: 93 VDVDLWLITAFHEKGSLSDFL-----KANVVSWNELCHIAETMARGLAYLHEDIPGLKDG 147
Query: 403 ---DIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQ-GTPGYVDPEYHQC 458
I HRD+K+ N+LL +N +ADFGL+ F + T Q GT Y+ PE +
Sbjct: 148 HKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEG 207
Query: 459 ---YQLTD--KSDVYSFGVVLIELISSMPAVD 485
+Q + D+Y+ G+VL EL S A D
Sbjct: 208 AINFQRDAFLRIDMYAMGLVLWELASRCTAAD 239
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 13/205 (6%)
Query: 282 NDFSREKELGDGGFGTVYYGK-LKDGREVAVKRLYDNN---YRRVEQFMNEVEILTRLRH 337
+ F R K LG G FG V K ++ G A+K L +++E +NE IL +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
LV L + + + L +V E+ G + L + G + P A +
Sbjct: 101 PFLVKL-EFSFKDNSNLYMVMEYAPGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFE 155
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQ 457
YLH+ D+I+RD+K N+++D ++V DFG ++ V + GTP Y+ PE
Sbjct: 156 YLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIL 211
Query: 458 CYQLTDKSDVYSFGVVLIELISSMP 482
D ++ GV++ E+ + P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 94/199 (47%), Gaps = 11/199 (5%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRV--EQFMNEVEILTRLRHKN 339
+DF + ELG G G V+ K V ++L + Q + E+++L
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 92
Query: 340 LVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYL 399
+V +G YS G + + +G DQ+ K G + I ++I L YL
Sbjct: 93 IVGFYGAF--YSDGEISICMEHMDGGSLDQV---LKKAGRIPEQILGKVSIAVIKGLTYL 147
Query: 400 HAS-DIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQC 458
I+HRDVK +NIL++S +K+ DFG+S + ++ + GT Y+ PE Q
Sbjct: 148 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL---IDSMANSFVGTRSYMSPERLQG 204
Query: 459 YQLTDKSDVYSFGVVLIEL 477
+ +SD++S G+ L+E+
Sbjct: 205 THYSVQSDIWSMGLSLVEM 223
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 96/197 (48%), Gaps = 19/197 (9%)
Query: 284 FSREKELGDGGFGTVYYGKLKDGRE-VAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVS 342
F E ELG G VY K K ++ A+K L +++ + E+ +L RL H N++
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVR--TEIGVLLRLSHPNIIK 112
Query: 343 L---FGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYL 399
L F + S LV E V G + D++ + G + + + A+AYL
Sbjct: 113 LKEIFETPTEIS----LVLELVTGGELFDRI----VEKGYYSERDAADAVKQILEAVAYL 164
Query: 400 HASDIIHRDVKTNNILLDS---NFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYH 456
H + I+HRD+K N+L + + +K+ADFGLS++ V + GTPGY PE
Sbjct: 165 HENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVC--GTPGYCAPEIL 222
Query: 457 QCYQLTDKSDVYSFGVV 473
+ + D++S G++
Sbjct: 223 RGCAYGPEVDMWSVGII 239
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 102/226 (45%), Gaps = 24/226 (10%)
Query: 273 SYSDLAEAT-NDFSREKELGDGGFGTVYYGKLK------DGREVAVKRLYDNNYRRVE-Q 324
S SDL E + + + LG G FG VY G++ +VAVK L + + E
Sbjct: 20 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 79
Query: 325 FMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDR---AKHGLLT 381
F+ E I+++ H+N+V G S S ++ E +A G + L R ++ L
Sbjct: 80 FLMEALIISKFNHQNIVRCIG-VSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLA 138
Query: 382 WPIRMNIAIETASALAYLHASDIIHRDVKTNNILL---DSNFCVKVADFGLSRLFPLDVT 438
+++A + A YL + IHRD+ N LL K+ DFG++R D+
Sbjct: 139 MLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIY 194
Query: 439 HVSTAPQGTPG-----YVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
S +G ++ PE T K+D +SFGV+L E+ S
Sbjct: 195 RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 94/199 (47%), Gaps = 11/199 (5%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRV--EQFMNEVEILTRLRHKN 339
+DF + ELG G G V+ K V ++L + Q + E+++L
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 340 LVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYL 399
+V +G YS G + + +G DQ+ K G + I ++I L YL
Sbjct: 66 IVGFYGAF--YSDGEISICMEHMDGGSLDQV---LKKAGRIPEQILGKVSIAVIKGLTYL 120
Query: 400 HAS-DIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQC 458
I+HRDVK +NIL++S +K+ DFG+S + ++ + GT Y+ PE Q
Sbjct: 121 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL---IDSMANSFVGTRSYMSPERLQG 177
Query: 459 YQLTDKSDVYSFGVVLIEL 477
+ +SD++S G+ L+E+
Sbjct: 178 THYSVQSDIWSMGLSLVEM 196
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 100/204 (49%), Gaps = 9/204 (4%)
Query: 280 ATNDFSREKELGDGGFGTVYYGKLK-DGREVAVKRL-YDNNYRRV-EQFMNEVEILTRLR 336
+ +F + +++G+G +G VY + K G VA+K++ D V + E+ +L L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 337 HKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASAL 396
H N+V L ++ L LV+EF+ + D + + P+ + + L
Sbjct: 62 HPNIVKLLDVIHTENK-LYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGL 117
Query: 397 AYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPE-Y 455
A+ H+ ++HRD+K N+L+++ +K+ADFGL+R F + V T Y PE
Sbjct: 118 AFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPV-RTYXHEVVTLWYRAPEIL 176
Query: 456 HQCYQLTDKSDVYSFGVVLIELIS 479
C + D++S G + E+++
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 99/201 (49%), Gaps = 9/201 (4%)
Query: 283 DFSREKELGDGGFGTVYYGKLK-DGREVAVKRL-YDNNYRRV-EQFMNEVEILTRLRHKN 339
+F + +++G+G +G VY + K G VA+ ++ D V + E+ +L L H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 340 LVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYL 399
+V L ++ L LV+EF+ + D + + P+ + + LA+
Sbjct: 64 IVKLLDVIHTENK-LYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 400 HASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPE-YHQC 458
H+ ++HRD+K N+L+++ +K+ADFGL+R F + V T T Y PE C
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVTLWYRAPEILLGC 178
Query: 459 YQLTDKSDVYSFGVVLIELIS 479
+ D++S G + E+++
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVT 199
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 99/201 (49%), Gaps = 9/201 (4%)
Query: 283 DFSREKELGDGGFGTVYYGKLK-DGREVAVKRL-YDNNYRRV-EQFMNEVEILTRLRHKN 339
+F + +++G+G +G VY + K G VA+ ++ D V + E+ +L L H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 340 LVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYL 399
+V L ++ L LV+EF+ + D + + P+ + + LA+
Sbjct: 63 IVKLLDVIHTENK-LYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 400 HASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPE-YHQC 458
H+ ++HRD+K N+L+++ +K+ADFGL+R F + V T T Y PE C
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVTLWYRAPEILLGC 177
Query: 459 YQLTDKSDVYSFGVVLIELIS 479
+ D++S G + E+++
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVT 198
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 99/202 (49%), Gaps = 9/202 (4%)
Query: 282 NDFSREKELGDGGFGTVYYGKLK-DGREVAVKRL-YDNNYRRV-EQFMNEVEILTRLRHK 338
+F + +++G+G +G VY + K G VA+K++ D V + E+ +L L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 339 NLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAY 398
N+V L ++ L LV+EF+ + D + + P+ + + LA+
Sbjct: 62 NIVKLLDVIHTENK-LYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 399 LHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPE-YHQ 457
H+ ++HRD+K N+L+++ +K+ADFGL+R F + V T Y PE
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHEVVTLWYRAPEILLG 176
Query: 458 CYQLTDKSDVYSFGVVLIELIS 479
C + D++S G + E+++
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVT 198
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 99/201 (49%), Gaps = 9/201 (4%)
Query: 283 DFSREKELGDGGFGTVYYGKLK-DGREVAVKRL-YDNNYRRV-EQFMNEVEILTRLRHKN 339
+F + +++G+G +G VY + K G VA+K++ D V + E+ +L L H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 340 LVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYL 399
+V L ++ L LV+EF+ + D + + P+ + + LA+
Sbjct: 63 IVKLLDVIHTENK-LYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 400 HASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPE-YHQC 458
H+ ++HRD+K N+L+++ +K+ADFGL+R F + V T Y PE C
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHEVVTLWYRAPEILLGC 177
Query: 459 YQLTDKSDVYSFGVVLIELIS 479
+ D++S G + E+++
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVT 198
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 94/199 (47%), Gaps = 11/199 (5%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRV--EQFMNEVEILTRLRHKN 339
+DF + ELG G G V+ K V ++L + Q + E+++L
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 340 LVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYL 399
+V +G YS G + + +G DQ+ K G + I ++I L YL
Sbjct: 66 IVGFYGAF--YSDGEISICMEHMDGGSLDQV---LKKAGRIPEQILGKVSIAVIKGLTYL 120
Query: 400 HAS-DIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQC 458
I+HRDVK +NIL++S +K+ DFG+S + ++ + GT Y+ PE Q
Sbjct: 121 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL---IDSMANSFVGTRSYMSPERLQG 177
Query: 459 YQLTDKSDVYSFGVVLIEL 477
+ +SD++S G+ L+E+
Sbjct: 178 THYSVQSDIWSMGLSLVEM 196
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 104/203 (51%), Gaps = 14/203 (6%)
Query: 284 FSREKELGDGGFGTVYYGKLKDGRE-VAVKR--LYDNNYRRVEQFMNEVEILTRLRHKNL 340
+ + +++G+G +GTV+ K ++ E VA+KR L D++ + E+ +L L+HKN+
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI 63
Query: 341 VSLFGCTSRYSQGLLLVYEFVANG--TVADQLHGDRAKHGLLTWPIRMNIAIETASALAY 398
V L + L LV+EF D +GD L I + + L +
Sbjct: 64 VRLHDVLHS-DKKLTLVFEFCDQDLKKYFDSCNGD------LDPEIVKSFLFQLLKGLGF 116
Query: 399 LHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQC 458
H+ +++HRD+K N+L++ N +K+A+FGL+R F + V +A T Y P+
Sbjct: 117 CHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPV-RCYSAEVVTLWYRPPDVLFG 175
Query: 459 YQLTDKS-DVYSFGVVLIELISS 480
+L S D++S G + EL ++
Sbjct: 176 AKLYSTSIDMWSAGCIFAELANA 198
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 102/226 (45%), Gaps = 24/226 (10%)
Query: 273 SYSDLAEAT-NDFSREKELGDGGFGTVYYGKLK------DGREVAVKRLYDNNYRRVE-Q 324
S SDL E + + + LG G FG VY G++ +VAVK L + + E
Sbjct: 20 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 79
Query: 325 FMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDR---AKHGLLT 381
F+ E I+++ H+N+V G S S ++ E +A G + L R ++ L
Sbjct: 80 FLMEALIISKFNHQNIVRCIG-VSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLA 138
Query: 382 WPIRMNIAIETASALAYLHASDIIHRDVKTNNILL---DSNFCVKVADFGLSRLFPLDVT 438
+++A + A YL + IHRD+ N LL K+ DFG++R D+
Sbjct: 139 MLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIY 194
Query: 439 HVSTAPQGTPG-----YVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
S +G ++ PE T K+D +SFGV+L E+ S
Sbjct: 195 RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 99/201 (49%), Gaps = 9/201 (4%)
Query: 283 DFSREKELGDGGFGTVYYGKLK-DGREVAVKRL-YDNNYRRV-EQFMNEVEILTRLRHKN 339
+F + +++G+G +G VY + K G VA+K++ D V + E+ +L L H N
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 340 LVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYL 399
+V L ++ L LV+EF+ + D + + P+ + + LA+
Sbjct: 65 IVKLLDVIHTENK-LYLVFEFLHQDL---KKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 400 HASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPE-YHQC 458
H+ ++HRD+K N+L+++ +K+ADFGL+R F + V T Y PE C
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHEVVTLWYRAPEILLGC 179
Query: 459 YQLTDKSDVYSFGVVLIELIS 479
+ D++S G + E+++
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVT 200
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 121/268 (45%), Gaps = 48/268 (17%)
Query: 306 GREVAVKRLYDNNYRRVEQFMNEVEILTR-----LR----HKNLVSLFGCTSRYSQGLLL 356
G E AVK + R + + EV TR LR H ++++L + S + L
Sbjct: 119 GHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLID-SYESSSFMFL 177
Query: 357 VYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDIIHRDVKTNNILL 416
V++ + G + D L A L+ +I A+++LHA++I+HRD+K NILL
Sbjct: 178 VFDLMRKGELFDYLTEKVA----LSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILL 233
Query: 417 DSNFCVKVADFGLSRLFPLDVTHVSTAPQ-----GTPGYVDPEYHQCYQ------LTDKS 465
D N ++++DFG S H+ + GTPGY+ PE +C +
Sbjct: 234 DDNMQIRLSDFGFS-------CHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEV 286
Query: 466 DVYSFGVVLIELISSMPAVDMNRHRHEINLANLAINKIQKCAFDELIDPCLGFESDEEVK 525
D+++ GV+L L++ P HR +I L + I + + F S E
Sbjct: 287 DLWACGVILFTLLAGSPPF---WHRRQI----LMLRMIMEGQYQ--------FSSPEWDD 331
Query: 526 RMTTSVAELAFLCLQQNKELRPSMEEVL 553
R +T V +L LQ + E R + E+ L
Sbjct: 332 RSST-VKDLISRLLQVDPEARLTAEQAL 358
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 94/199 (47%), Gaps = 11/199 (5%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRV--EQFMNEVEILTRLRHKN 339
+DF + ELG G G V+ K V ++L + Q + E+++L
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 340 LVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYL 399
+V +G YS G + + +G DQ+ K G + I ++I L YL
Sbjct: 66 IVGFYGAF--YSDGEISICMEHMDGGSLDQV---LKKAGRIPEQILGKVSIAVIKGLTYL 120
Query: 400 HAS-DIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQC 458
I+HRDVK +NIL++S +K+ DFG+S + ++ + GT Y+ PE Q
Sbjct: 121 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL---IDSMANSFVGTRSYMSPERLQG 177
Query: 459 YQLTDKSDVYSFGVVLIEL 477
+ +SD++S G+ L+E+
Sbjct: 178 THYSVQSDIWSMGLSLVEM 196
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 94/199 (47%), Gaps = 11/199 (5%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRV--EQFMNEVEILTRLRHKN 339
+DF + ELG G G V+ K V ++L + Q + E+++L
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 340 LVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYL 399
+V +G YS G + + +G DQ+ K G + I ++I L YL
Sbjct: 66 IVGFYGAF--YSDGEISICMEHMDGGSLDQV---LKKAGRIPEQILGKVSIAVIKGLTYL 120
Query: 400 HAS-DIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQC 458
I+HRDVK +NIL++S +K+ DFG+S + ++ + GT Y+ PE Q
Sbjct: 121 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL---IDSMANSFVGTRSYMSPERLQG 177
Query: 459 YQLTDKSDVYSFGVVLIEL 477
+ +SD++S G+ L+E+
Sbjct: 178 THYSVQSDIWSMGLSLVEM 196
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 92/205 (44%), Gaps = 13/205 (6%)
Query: 282 NDFSREKELGDGGFGTVYYGK-LKDGREVAVKRLYDNN---YRRVEQFMNEVEILTRLRH 337
+ F R K LG G FG V K ++ G A+K L +++E +NE IL +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
L L + + + L +V E+ G + L + G + P A +
Sbjct: 102 PFLTKL-EFSFKDNSNLYMVMEYAPGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFE 156
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQ 457
YLH+ D+I+RD+K N+++D +KV DFG ++ V + GTP Y+ PE
Sbjct: 157 YLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIL 212
Query: 458 CYQLTDKSDVYSFGVVLIELISSMP 482
D ++ GV++ E+ + P
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 97/216 (44%), Gaps = 15/216 (6%)
Query: 282 NDFSREKELGDGGFGTVYYGKLK-DGREVAVKRLYDN---NYRRVEQFMNEVEILTRLRH 337
NDF K LG G FG V + K GR A+K L V + E +L RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
L +L + + L V E+ G + L +R + T E SAL
Sbjct: 65 PFLTALKYAFQTHDR-LCFVMEYANGGELFFHLSRER----VFTEERARFYGAEIVSALE 119
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQ--GTPGYVDPEY 455
YLH+ D+++RD+K N++LD + +K+ DFGL + ++ +T GTP Y+ PE
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCGTPEYLAPEV 176
Query: 456 HQCYQLTDKSDVYSFGVVLIELI-SSMPAVDMNRHR 490
+ D + GVV+ E++ +P + + R
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER 212
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 92/205 (44%), Gaps = 13/205 (6%)
Query: 282 NDFSREKELGDGGFGTVYYGK-LKDGREVAVKRLYDNN---YRRVEQFMNEVEILTRLRH 337
+ F R K LG G FG V K ++ G A+K L +++E +NE IL +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
L L + + + L +V E+ G + L + G + P A +
Sbjct: 102 PFLTKL-EFSFKDNSNLYMVMEYAPGGEMFSHLR----RIGRFSEPHARFYAAQIVLTFE 156
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQ 457
YLH+ D+I+RD+K N+++D +KV DFG ++ V + GTP Y+ PE
Sbjct: 157 YLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIL 212
Query: 458 CYQLTDKSDVYSFGVVLIELISSMP 482
D ++ GV++ E+ + P
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 97/216 (44%), Gaps = 15/216 (6%)
Query: 282 NDFSREKELGDGGFGTVYYGKLK-DGREVAVKRLYDN---NYRRVEQFMNEVEILTRLRH 337
NDF K LG G FG V + K GR A+K L V + E +L RH
Sbjct: 10 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 69
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
L +L + + L V E+ G + L +R + T E SAL
Sbjct: 70 PFLTALKYAFQTHDR-LCFVMEYANGGELFFHLSRER----VFTEERARFYGAEIVSALE 124
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQ--GTPGYVDPEY 455
YLH+ D+++RD+K N++LD + +K+ DFGL + ++ +T GTP Y+ PE
Sbjct: 125 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCGTPEYLAPEV 181
Query: 456 HQCYQLTDKSDVYSFGVVLIELI-SSMPAVDMNRHR 490
+ D + GVV+ E++ +P + + R
Sbjct: 182 LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER 217
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 97/216 (44%), Gaps = 15/216 (6%)
Query: 282 NDFSREKELGDGGFGTVYYGKLK-DGREVAVKRLYDN---NYRRVEQFMNEVEILTRLRH 337
NDF K LG G FG V + K GR A+K L V + E +L RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
L +L + + L V E+ G + L +R + T E SAL
Sbjct: 65 PFLTALKYAFQTHDR-LCFVMEYANGGELFFHLSRER----VFTEERARFYGAEIVSALE 119
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQ--GTPGYVDPEY 455
YLH+ D+++RD+K N++LD + +K+ DFGL + ++ +T GTP Y+ PE
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCGTPEYLAPEV 176
Query: 456 HQCYQLTDKSDVYSFGVVLIELI-SSMPAVDMNRHR 490
+ D + GVV+ E++ +P + + R
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER 212
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 102/226 (45%), Gaps = 24/226 (10%)
Query: 273 SYSDLAEAT-NDFSREKELGDGGFGTVYYGKLK------DGREVAVKRLYDNNYRRVE-Q 324
S SDL E + + + LG G FG VY G++ +VAVK L + + E
Sbjct: 37 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 96
Query: 325 FMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDR---AKHGLLT 381
F+ E I+++ H+N+V G S S ++ E +A G + L R ++ L
Sbjct: 97 FLMEALIISKFNHQNIVRCIG-VSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLA 155
Query: 382 WPIRMNIAIETASALAYLHASDIIHRDVKTNNILL---DSNFCVKVADFGLSRLFPLDVT 438
+++A + A YL + IHRD+ N LL K+ DFG++R D+
Sbjct: 156 MLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIY 211
Query: 439 HVSTAPQGTPG-----YVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
S +G ++ PE T K+D +SFGV+L E+ S
Sbjct: 212 RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 102/226 (45%), Gaps = 24/226 (10%)
Query: 273 SYSDLAEAT-NDFSREKELGDGGFGTVYYGKLK------DGREVAVKRLYDNNYRRVE-Q 324
S SDL E + + + LG G FG VY G++ +VAVK L + + E
Sbjct: 12 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 71
Query: 325 FMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDR---AKHGLLT 381
F+ E I+++ H+N+V G S S ++ E +A G + L R ++ L
Sbjct: 72 FLMEALIISKFNHQNIVRCIG-VSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLA 130
Query: 382 WPIRMNIAIETASALAYLHASDIIHRDVKTNNILL---DSNFCVKVADFGLSRLFPLDVT 438
+++A + A YL + IHRD+ N LL K+ DFG++R D+
Sbjct: 131 MLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIY 186
Query: 439 HVSTAPQGTPG-----YVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
S +G ++ PE T K+D +SFGV+L E+ S
Sbjct: 187 RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 97/216 (44%), Gaps = 15/216 (6%)
Query: 282 NDFSREKELGDGGFGTVYYGKLK-DGREVAVKRLYDN---NYRRVEQFMNEVEILTRLRH 337
NDF K LG G FG V + K GR A+K L V + E +L RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
L +L + + L V E+ G + L +R + T E SAL
Sbjct: 65 PFLTALKYAFQTHDR-LCFVMEYANGGELFFHLSRER----VFTEERARFYGAEIVSALE 119
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQ--GTPGYVDPEY 455
YLH+ D+++RD+K N++LD + +K+ DFGL + ++ +T GTP Y+ PE
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCGTPEYLAPEV 176
Query: 456 HQCYQLTDKSDVYSFGVVLIELI-SSMPAVDMNRHR 490
+ D + GVV+ E++ +P + + R
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER 212
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 102/209 (48%), Gaps = 15/209 (7%)
Query: 281 TNDFSREKELGDGGFGTVYYGKLK-DGREVAVKRLYDNNYRRVEQ---FMNEVEILTRLR 336
++ + R K+LG G +G V K K G E A+K + ++ ++EV +L +L
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 62
Query: 337 HKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASAL 396
H N++ L+ + LV E G + D++ R K + + M + S
Sbjct: 63 HPNIMKLYEFFED-KRNYYLVMEVYRGGELFDEIIL-RQKFSEVDAAVIMK---QVLSGT 117
Query: 397 AYLHASDIIHRDVKTNNILLDS---NFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDP 453
YLH +I+HRD+K N+LL+S + +K+ DFGLS F +V GT Y+ P
Sbjct: 118 TYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF--EVGGKMKERLGTAYYIAP 175
Query: 454 EYHQCYQLTDKSDVYSFGVVLIELISSMP 482
E + + +K DV+S GV+L L+ P
Sbjct: 176 EVLR-KKYDEKCDVWSCGVILYILLCGYP 203
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 108/229 (47%), Gaps = 18/229 (7%)
Query: 281 TNDFSREKELGDGGFGTVYYGKLK-DGREVAVKRL--YDNNYRRVEQFMNEVEILTRLRH 337
++DF + LG+G +G V K G VA+K++ +D + + E++IL +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT-LREIKILKHFKH 68
Query: 338 KNLVSLFGCTSRYS-QGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASAL 396
+N++++F S + VY + + LH + L I+ I +T A+
Sbjct: 69 ENIITIFNIQRPDSFENFNEVY--IIQELMQTDLHRVISTQMLSDDHIQYFI-YQTLRAV 125
Query: 397 AYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLF---------PLDVTHVSTAPQGT 447
LH S++IHRD+K +N+L++SN +KV DFGL+R+ P T T
Sbjct: 126 KVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVAT 185
Query: 448 PGYVDPEYH-QCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHRHEINL 495
Y PE + + DV+S G +L EL P +RH++ L
Sbjct: 186 RWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLL 234
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 102/226 (45%), Gaps = 24/226 (10%)
Query: 273 SYSDLAEAT-NDFSREKELGDGGFGTVYYGKLK------DGREVAVKRLYDNNYRRVE-Q 324
S SDL E + + + LG G FG VY G++ +VAVK L + + E
Sbjct: 35 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 94
Query: 325 FMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDR---AKHGLLT 381
F+ E I+++ H+N+V G S S ++ E +A G + L R ++ L
Sbjct: 95 FLMEALIISKFNHQNIVRCIG-VSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLA 153
Query: 382 WPIRMNIAIETASALAYLHASDIIHRDVKTNNILL---DSNFCVKVADFGLSRLFPLDVT 438
+++A + A YL + IHRD+ N LL K+ DFG++R D+
Sbjct: 154 MLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIY 209
Query: 439 HVSTAPQGTPG-----YVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
S +G ++ PE T K+D +SFGV+L E+ S
Sbjct: 210 RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 102/226 (45%), Gaps = 24/226 (10%)
Query: 273 SYSDLAEAT-NDFSREKELGDGGFGTVYYGKLK------DGREVAVKRLYDNNYRRVE-Q 324
S SDL E + + + LG G FG VY G++ +VAVK L + + E
Sbjct: 35 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELD 94
Query: 325 FMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDR---AKHGLLT 381
F+ E I+++ H+N+V G S S ++ E +A G + L R ++ L
Sbjct: 95 FLMEALIISKFNHQNIVRCIG-VSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLA 153
Query: 382 WPIRMNIAIETASALAYLHASDIIHRDVKTNNILL---DSNFCVKVADFGLSRLFPLDVT 438
+++A + A YL + IHRD+ N LL K+ DFG++R D+
Sbjct: 154 MLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIY 209
Query: 439 HVSTAPQGTPG-----YVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
S +G ++ PE T K+D +SFGV+L E+ S
Sbjct: 210 RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 102/226 (45%), Gaps = 24/226 (10%)
Query: 273 SYSDLAEAT-NDFSREKELGDGGFGTVYYGKLK------DGREVAVKRLYDNNYRRVE-Q 324
S SDL E + + + LG G FG VY G++ +VAVK L + + E
Sbjct: 21 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 80
Query: 325 FMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDR---AKHGLLT 381
F+ E I+++ H+N+V G S S ++ E +A G + L R ++ L
Sbjct: 81 FLMEALIISKFNHQNIVRCIG-VSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLA 139
Query: 382 WPIRMNIAIETASALAYLHASDIIHRDVKTNNILL---DSNFCVKVADFGLSRLFPLDVT 438
+++A + A YL + IHRD+ N LL K+ DFG++R D+
Sbjct: 140 MLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIY 195
Query: 439 HVSTAPQGTPG-----YVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
S +G ++ PE T K+D +SFGV+L E+ S
Sbjct: 196 RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 101/207 (48%), Gaps = 21/207 (10%)
Query: 283 DFSREKELGDGGFGTVYYGKLK-DGREVAVKRL-YDNNYRRV-EQFMNEVEILTRLRHKN 339
+F + +++G+G +G VY + K G VA+K++ D V + E+ +L L H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 340 LVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKH---GLLT---WPIRMNIAIETA 393
+V L ++ L LV+EF LH D K LT P+ + +
Sbjct: 64 IVKLLDVIHTENK-LYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 394 SALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDP 453
LA+ H+ ++HRD+K N+L+++ +K+ADFGL+R F + V T T Y P
Sbjct: 114 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVTLWYRAP 172
Query: 454 EYHQCYQLTDKS-DVYSFGVVLIELIS 479
E + + D++S G + E+++
Sbjct: 173 EILLGXKYYSTAVDIWSLGCIFAEMVT 199
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 96/212 (45%), Gaps = 12/212 (5%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKDGR-EVAVKRLYDNNYRR--VE-QFMNEVEILTRLRH 337
+DF + LG G FG VY + K VA+K L+ + + VE Q E+EI L H
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
N++ L+ + + L+ E+ G +L+ + K I E A AL
Sbjct: 83 PNILRLYNYFYDRRR-IYLILEYAPRG----ELYKELQKSCTFDEQRTATIMEELADALM 137
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQ 457
Y H +IHRD+K N+LL +K+ADFG S P + GT Y+ PE +
Sbjct: 138 YCHGKKVIHRDIKPENLLLGLKGELKIADFGWSVHAP---SLRRKTMCGTLDYLPPEMIE 194
Query: 458 CYQLTDKSDVYSFGVVLIELISSMPAVDMNRH 489
+K D++ GV+ EL+ P + H
Sbjct: 195 GRMHNEKVDLWCIGVLCYELLVGNPPFESASH 226
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 13/200 (6%)
Query: 287 EKELGDGGFGTV---YYGKLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLV 341
+KELG G FGTV YY K + VAVK L + N+ ++ + E ++ +L + +V
Sbjct: 30 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 89
Query: 342 SLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHA 401
+ G ++ +LV E G + L +R + + + + + YL
Sbjct: 90 RMIGICE--AESWMLVMEMAELGPLNKYLQQNRHVKDKNI----IELVHQVSMGMKYLEE 143
Query: 402 SDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGT--PGYVDPEYHQCY 459
S+ +HRD+ N+LL + K++DFGLS+ D + G + PE Y
Sbjct: 144 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 203
Query: 460 QLTDKSDVYSFGVVLIELIS 479
+ + KSDV+SFGV++ E S
Sbjct: 204 KFSSKSDVWSFGVLMWEAFS 223
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 13/200 (6%)
Query: 287 EKELGDGGFGTV---YYGKLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLV 341
+KELG G FGTV YY K + VAVK L + N+ ++ + E ++ +L + +V
Sbjct: 32 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 91
Query: 342 SLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHA 401
+ G ++ +LV E G + L +R + + + + + YL
Sbjct: 92 RMIGICE--AESWMLVMEMAELGPLNKYLQQNRHVKDKNI----IELVHQVSMGMKYLEE 145
Query: 402 SDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGT--PGYVDPEYHQCY 459
S+ +HRD+ N+LL + K++DFGLS+ D + G + PE Y
Sbjct: 146 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 205
Query: 460 QLTDKSDVYSFGVVLIELIS 479
+ + KSDV+SFGV++ E S
Sbjct: 206 KFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 13/200 (6%)
Query: 287 EKELGDGGFGTV---YYGKLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLV 341
+KELG G FGTV YY K + VAVK L + N+ ++ + E ++ +L + +V
Sbjct: 32 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 91
Query: 342 SLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHA 401
+ G ++ +LV E G + L +R + + + + + YL
Sbjct: 92 RMIGICE--AESWMLVMEMAELGPLNKYLQQNRHVKDKNI----IELVHQVSMGMKYLEE 145
Query: 402 SDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGT--PGYVDPEYHQCY 459
S+ +HRD+ N+LL + K++DFGLS+ D + G + PE Y
Sbjct: 146 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 205
Query: 460 QLTDKSDVYSFGVVLIELIS 479
+ + KSDV+SFGV++ E S
Sbjct: 206 KFSSKSDVWSFGVLMWEAFS 225
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 91/205 (44%), Gaps = 13/205 (6%)
Query: 282 NDFSREKELGDGGFGTVYYGK-LKDGREVAVKRLYDNN---YRRVEQFMNEVEILTRLRH 337
+ F R K LG G FG V K ++ G A+K L +++E +NE IL +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
L L + + + L +V E+ G + L + G P A +
Sbjct: 102 PFLTKL-EFSFKDNSNLYMVMEYAPGGEMFSHLR----RIGRFXEPHARFYAAQIVLTFE 156
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQ 457
YLH+ D+I+RD+K N+++D +KV DFG ++ V + GTP Y+ PE
Sbjct: 157 YLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIL 212
Query: 458 CYQLTDKSDVYSFGVVLIELISSMP 482
D ++ GV++ E+ + P
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 102/226 (45%), Gaps = 24/226 (10%)
Query: 273 SYSDLAEAT-NDFSREKELGDGGFGTVYYGKLK------DGREVAVKRLYDNNYRRVE-Q 324
S SDL E + + + LG G FG VY G++ +VAVK L + + E
Sbjct: 27 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 86
Query: 325 FMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDR---AKHGLLT 381
F+ E I+++ H+N+V G S S ++ E +A G + L R ++ L
Sbjct: 87 FLMEALIISKFNHQNIVRCIG-VSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLA 145
Query: 382 WPIRMNIAIETASALAYLHASDIIHRDVKTNNILL---DSNFCVKVADFGLSRLFPLDVT 438
+++A + A YL + IHRD+ N LL K+ DFG++R D+
Sbjct: 146 MLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIY 201
Query: 439 HVSTAPQGTPG-----YVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
S +G ++ PE T K+D +SFGV+L E+ S
Sbjct: 202 RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 102/226 (45%), Gaps = 24/226 (10%)
Query: 273 SYSDLAEAT-NDFSREKELGDGGFGTVYYGKLK------DGREVAVKRLYDNNYRRVE-Q 324
S SDL E + + + LG G FG VY G++ +VAVK L + + E
Sbjct: 47 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 106
Query: 325 FMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDR---AKHGLLT 381
F+ E I+++ H+N+V G S S ++ E +A G + L R ++ L
Sbjct: 107 FLMEALIISKFNHQNIVRCIG-VSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLA 165
Query: 382 WPIRMNIAIETASALAYLHASDIIHRDVKTNNILL---DSNFCVKVADFGLSRLFPLDVT 438
+++A + A YL + IHRD+ N LL K+ DFG++R D+
Sbjct: 166 MLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIY 221
Query: 439 HVSTAPQGTPG-----YVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
S +G ++ PE T K+D +SFGV+L E+ S
Sbjct: 222 RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 103/218 (47%), Gaps = 14/218 (6%)
Query: 276 DLAEATNDFSREKELGDGGFGTVYYGKLK--DGR--EVAVKRLYDNNYRR--VEQFMNEV 329
D+ F+ + LG G FG+V +LK DG +VAVK L + +E+F+ E
Sbjct: 17 DVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREA 76
Query: 330 EILTRLRHKNLVSLFGCTSR-YSQGLL----LVYEFVANGTVADQLHGDRAKHGLLTWPI 384
+ H ++ L G + R ++G L ++ F+ +G + L R P+
Sbjct: 77 ACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPL 136
Query: 385 R--MNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSR-LFPLDVTHVS 441
+ + ++ A + YL + + IHRD+ N +L + V VADFGLSR ++ D
Sbjct: 137 QTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQG 196
Query: 442 TAPQGTPGYVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
A + ++ E T SDV++FGV + E+++
Sbjct: 197 CASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMT 234
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 105/224 (46%), Gaps = 37/224 (16%)
Query: 288 KELGDGGFG-----TVYYGKLKDG-REVAVKRLYDN-NYRRVEQFMNEVEILTRLRHKNL 340
K LG+G FG T ++ K + G VAVK L +N + + ++E +L ++ H ++
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRA--------------------KHGLL 380
+ L+G S+ LLL+ E+ G++ L R L
Sbjct: 89 IKLYGACSQ-DGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERAL 147
Query: 381 TWPIRMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHV 440
T ++ A + + + YL ++HRD+ NIL+ +K++DFGLSR DV
Sbjct: 148 TMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSR----DVYEE 203
Query: 441 STAPQGTPGYVDPEYHQCYQLTD-----KSDVYSFGVVLIELIS 479
+ + + G + ++ L D +SDV+SFGV+L E+++
Sbjct: 204 DSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 93/199 (46%), Gaps = 11/199 (5%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRV--EQFMNEVEILTRLRHKN 339
+DF + ELG G G V+ K V ++L + Q + E+++L
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 68
Query: 340 LVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYL 399
+V +G YS G + + +G DQ+ K G + I ++I L YL
Sbjct: 69 IVGFYGAF--YSDGEISICMEHMDGGSLDQV---LKKAGRIPEQILGKVSIAVIKGLTYL 123
Query: 400 HAS-DIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQC 458
I+HRDVK +NIL++S +K+ DFG+S + ++ GT Y+ PE Q
Sbjct: 124 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL---IDEMANEFVGTRSYMSPERLQG 180
Query: 459 YQLTDKSDVYSFGVVLIEL 477
+ +SD++S G+ L+E+
Sbjct: 181 THYSVQSDIWSMGLSLVEM 199
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 105/224 (46%), Gaps = 37/224 (16%)
Query: 288 KELGDGGFG-----TVYYGKLKDG-REVAVKRLYDN-NYRRVEQFMNEVEILTRLRHKNL 340
K LG+G FG T ++ K + G VAVK L +N + + ++E +L ++ H ++
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRA--------------------KHGLL 380
+ L+G S+ LLL+ E+ G++ L R L
Sbjct: 89 IKLYGACSQ-DGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERAL 147
Query: 381 TWPIRMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHV 440
T ++ A + + + YL ++HRD+ NIL+ +K++DFGLSR DV
Sbjct: 148 TMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSR----DVYEE 203
Query: 441 STAPQGTPGYVDPEYHQCYQLTD-----KSDVYSFGVVLIELIS 479
+ + + G + ++ L D +SDV+SFGV+L E+++
Sbjct: 204 DSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 102/211 (48%), Gaps = 24/211 (11%)
Query: 282 NDFSREKELGDGGFGTVYYG-KLKDGREV----AVKRLYDNNYRRV-EQFMNEVEILTRL 335
+F + K LG G FGTVY G + +G +V A+K L + + ++ ++E ++ +
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 336 RHKNLVSLFG-CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHG---LLTWPIRMNIAIE 391
+ ++ L G C + Q L+ + + G + D + + G LL W ++
Sbjct: 76 DNPHVCRLLGICLTSTVQ---LIMQLMPFGXLLDYVREHKDNIGSQYLLNW------CVQ 126
Query: 392 TASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP--- 448
A + YL ++HRD+ N+L+ + VK+ DFGL++L + P
Sbjct: 127 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 186
Query: 449 GYVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
++ H+ Y T +SDV+S+GV + EL++
Sbjct: 187 MALESILHRIY--THQSDVWSYGVTVWELMT 215
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 13/200 (6%)
Query: 287 EKELGDGGFGTV---YYGKLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLV 341
+KELG G FGTV YY K + VAVK L + N+ ++ + E ++ +L + +V
Sbjct: 374 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 433
Query: 342 SLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHA 401
+ G ++ +LV E G + L +R + + + + + YL
Sbjct: 434 RMIGICE--AESWMLVMEMAELGPLNKYLQQNRHVKDKNI----IELVHQVSMGMKYLEE 487
Query: 402 SDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGT--PGYVDPEYHQCY 459
S+ +HRD+ N+LL + K++DFGLS+ D + G + PE Y
Sbjct: 488 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 547
Query: 460 QLTDKSDVYSFGVVLIELIS 479
+ + KSDV+SFGV++ E S
Sbjct: 548 KFSSKSDVWSFGVLMWEAFS 567
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 13/200 (6%)
Query: 287 EKELGDGGFGTV---YYGKLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLV 341
+KELG G FGTV YY K + VAVK L + N+ ++ + E ++ +L + +V
Sbjct: 22 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 81
Query: 342 SLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHA 401
+ G ++ +LV E G + L +R + + + + + YL
Sbjct: 82 RMIGICE--AESWMLVMEMAELGPLNKYLQQNRHVKDKNI----IELVHQVSMGMKYLEE 135
Query: 402 SDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGT--PGYVDPEYHQCY 459
S+ +HRD+ N+LL + K++DFGLS+ D + G + PE Y
Sbjct: 136 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 195
Query: 460 QLTDKSDVYSFGVVLIELIS 479
+ + KSDV+SFGV++ E S
Sbjct: 196 KFSSKSDVWSFGVLMWEAFS 215
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 107/227 (47%), Gaps = 31/227 (13%)
Query: 282 NDFSREKELGDGGFGTVY------YGKLKDGREVAVKRLYDNNYR-RVEQFMNEVEILTR 334
N+ K LG G FG V GK +VAVK L + E M+E++I++
Sbjct: 31 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 90
Query: 335 L-RHKNLVSLFG-CTSRYSQGLLLVYEFVANGTV-------ADQLHG------------D 373
L +H+N+V+L G CT + +L++ E+ G + A+ + G D
Sbjct: 91 LGQHENIVNLLGACT--HGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLD 148
Query: 374 RAKHGLLTWPIRMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLF 433
+ L ++ + + A +A+L + + IHRDV N+LL + K+ DFGL+R
Sbjct: 149 KEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI 208
Query: 434 PLDVTHVSTAPQGTP-GYVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
D ++ P ++ PE T +SDV+S+G++L E+ S
Sbjct: 209 MNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 13/200 (6%)
Query: 287 EKELGDGGFGTV---YYGKLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLV 341
+KELG G FGTV YY K + VAVK L + N+ ++ + E ++ +L + +V
Sbjct: 10 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 69
Query: 342 SLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHA 401
+ G ++ +LV E G + L +R + + + + + YL
Sbjct: 70 RMIGICE--AESWMLVMEMAELGPLNKYLQQNRHVKDKNI----IELVHQVSMGMKYLEE 123
Query: 402 SDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGT--PGYVDPEYHQCY 459
S+ +HRD+ N+LL + K++DFGLS+ D + G + PE Y
Sbjct: 124 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 183
Query: 460 QLTDKSDVYSFGVVLIELIS 479
+ + KSDV+SFGV++ E S
Sbjct: 184 KFSSKSDVWSFGVLMWEAFS 203
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 107/220 (48%), Gaps = 20/220 (9%)
Query: 281 TNDFSREKELGDGGFGTVYYGKLKD-GREVAVK-----RLYDNNYRRVEQFMNEVEILTR 334
++++ ++ELG G F V K G E A K +L +++++E+ E I +
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLER---EARICRK 61
Query: 335 LRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETAS 394
L+H N+V L S L V++ V G +L D + + +
Sbjct: 62 LQHPNIVRLHDSIQEESFHYL-VFDLVTGG----ELFEDIVAREFYSEADASHCIQQILE 116
Query: 395 ALAYLHASDIIHRDVKTNNILLDS---NFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYV 451
++AY H++ I+HR++K N+LL S VK+ADFGL+ ++ + GTPGY+
Sbjct: 117 SIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYL 174
Query: 452 DPEYHQCYQLTDKSDVYSFGVVL-IELISSMPAVDMNRHR 490
PE + + D+++ GV+L I L+ P D ++HR
Sbjct: 175 SPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR 214
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 13/200 (6%)
Query: 287 EKELGDGGFGTV---YYGKLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLV 341
+KELG G FGTV YY K + VAVK L + N+ ++ + E ++ +L + +V
Sbjct: 16 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 75
Query: 342 SLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHA 401
+ G ++ +LV E G + L +R + + + + + YL
Sbjct: 76 RMIGICE--AESWMLVMEMAELGPLNKYLQQNRHVKDKNI----IELVHQVSMGMKYLEE 129
Query: 402 SDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGT--PGYVDPEYHQCY 459
S+ +HRD+ N+LL + K++DFGLS+ D + G + PE Y
Sbjct: 130 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 189
Query: 460 QLTDKSDVYSFGVVLIELIS 479
+ + KSDV+SFGV++ E S
Sbjct: 190 KFSSKSDVWSFGVLMWEAFS 209
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 107/220 (48%), Gaps = 20/220 (9%)
Query: 281 TNDFSREKELGDGGFGTVYYGKLKD-GREVAVK-----RLYDNNYRRVEQFMNEVEILTR 334
++++ ++ELG G F V K G E A K +L +++++E+ E I +
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLER---EARICRK 60
Query: 335 LRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETAS 394
L+H N+V L S L V++ V G +L D + + +
Sbjct: 61 LQHPNIVRLHDSIQEESFHYL-VFDLVTGG----ELFEDIVAREFYSEADASHCIQQILE 115
Query: 395 ALAYLHASDIIHRDVKTNNILLDS---NFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYV 451
++AY H++ I+HR++K N+LL S VK+ADFGL+ ++ + GTPGY+
Sbjct: 116 SIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYL 173
Query: 452 DPEYHQCYQLTDKSDVYSFGVVL-IELISSMPAVDMNRHR 490
PE + + D+++ GV+L I L+ P D ++HR
Sbjct: 174 SPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR 213
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 100/210 (47%), Gaps = 17/210 (8%)
Query: 281 TNDFSREKELGDGGFGTVYYGKLK-DGREVAVKRLYDNNYRRV---EQFMNEVEILTRLR 336
++ + ++ LG G FG V K K G+E AVK + ++ E + EV++L +L
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 337 HKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASAL 396
H N+ L+ LV E G + D++ + + I + S +
Sbjct: 85 HPNIXKLYEFFEDKGY-FYLVGEVYTGGELFDEIISRKR----FSEVDAARIIRQVLSGI 139
Query: 397 AYLHASDIIHRDVKTNNILLDS---NFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDP 453
Y H + I+HRD+K N+LL+S + +++ DFGLS F + + GT Y+ P
Sbjct: 140 TYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF--EASKKXKDKIGTAYYIAP 197
Query: 454 E-YHQCYQLTDKSDVYSFGVVLIELISSMP 482
E H Y +K DV+S GV+L L+S P
Sbjct: 198 EVLHGTYD--EKCDVWSTGVILYILLSGCP 225
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 94/199 (47%), Gaps = 11/199 (5%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRV--EQFMNEVEILTRLRHKN 339
+DF + ELG G G V+ K V ++L + Q + E+++L
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 84
Query: 340 LVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYL 399
+V +G YS G + + +G DQ+ K G + I ++I L YL
Sbjct: 85 IVGFYGAF--YSDGEISICMEHMDGGSLDQV---LKKAGRIPEQILGKVSIAVIKGLTYL 139
Query: 400 HAS-DIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQC 458
I+HRDVK +NIL++S +K+ DFG+S + ++ + GT Y+ PE Q
Sbjct: 140 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL---IDSMANSFVGTRSYMSPERLQG 196
Query: 459 YQLTDKSDVYSFGVVLIEL 477
+ +SD++S G+ L+E+
Sbjct: 197 THYSVQSDIWSMGLSLVEM 215
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 107/220 (48%), Gaps = 20/220 (9%)
Query: 281 TNDFSREKELGDGGFGTVYYGKLKD-GREVAVK-----RLYDNNYRRVEQFMNEVEILTR 334
++++ ++ELG G F V K G E A K +L +++++E+ E I +
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLER---EARICRK 61
Query: 335 LRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETAS 394
L+H N+V L S L V++ V G +L D + + +
Sbjct: 62 LQHPNIVRLHDSIQEESFHYL-VFDLVTGG----ELFEDIVAREFYSEADASHCIQQILE 116
Query: 395 ALAYLHASDIIHRDVKTNNILLDS---NFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYV 451
++AY H++ I+HR++K N+LL S VK+ADFGL+ ++ + GTPGY+
Sbjct: 117 SIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYL 174
Query: 452 DPEYHQCYQLTDKSDVYSFGVVL-IELISSMPAVDMNRHR 490
PE + + D+++ GV+L I L+ P D ++HR
Sbjct: 175 SPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR 214
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 13/200 (6%)
Query: 287 EKELGDGGFGTV---YYGKLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLV 341
+KELG G FGTV YY K + VAVK L + N+ ++ + E ++ +L + +V
Sbjct: 375 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 434
Query: 342 SLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHA 401
+ G ++ +LV E G + L +R + + + + + YL
Sbjct: 435 RMIGICE--AESWMLVMEMAELGPLNKYLQQNRHVKDKNI----IELVHQVSMGMKYLEE 488
Query: 402 SDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGT--PGYVDPEYHQCY 459
S+ +HRD+ N+LL + K++DFGLS+ D + G + PE Y
Sbjct: 489 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 548
Query: 460 QLTDKSDVYSFGVVLIELIS 479
+ + KSDV+SFGV++ E S
Sbjct: 549 KFSSKSDVWSFGVLMWEAFS 568
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 13/200 (6%)
Query: 287 EKELGDGGFGTV---YYGKLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLV 341
+KELG G FGTV YY K + VAVK L + N+ ++ + E ++ +L + +V
Sbjct: 12 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 71
Query: 342 SLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHA 401
+ G ++ +LV E G + L +R + + + + + YL
Sbjct: 72 RMIGICE--AESWMLVMEMAELGPLNKYLQQNRHVKDKNI----IELVHQVSMGMKYLEE 125
Query: 402 SDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGT--PGYVDPEYHQCY 459
S+ +HRD+ N+LL + K++DFGLS+ D + G + PE Y
Sbjct: 126 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 185
Query: 460 QLTDKSDVYSFGVVLIELIS 479
+ + KSDV+SFGV++ E S
Sbjct: 186 KFSSKSDVWSFGVLMWEAFS 205
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 102/211 (48%), Gaps = 24/211 (11%)
Query: 282 NDFSREKELGDGGFGTVYYG-KLKDGREV----AVKRLYDNNYRRV-EQFMNEVEILTRL 335
+F + K LG G FGTVY G + +G +V A+K L + + ++ ++E ++ +
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 336 RHKNLVSLFG-CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHG---LLTWPIRMNIAIE 391
+ ++ L G C + Q L+ + + G + D + + G LL W ++
Sbjct: 76 DNPHVCRLLGICLTSTVQ---LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQ 126
Query: 392 TASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP--- 448
A + YL ++HRD+ N+L+ + VK+ DFGL++L + P
Sbjct: 127 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 186
Query: 449 GYVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
++ H+ Y T +SDV+S+GV + EL++
Sbjct: 187 MALESILHRIY--THQSDVWSYGVTVWELMT 215
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 102/211 (48%), Gaps = 24/211 (11%)
Query: 282 NDFSREKELGDGGFGTVYYG-KLKDGREV----AVKRLYDNNYRRV-EQFMNEVEILTRL 335
+F + K LG G FGTVY G + +G +V A+K L + + ++ ++E ++ +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 336 RHKNLVSLFG-CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHG---LLTWPIRMNIAIE 391
+ ++ L G C + Q L+ + + G + D + + G LL W ++
Sbjct: 75 DNPHVCRLLGICLTSTVQ---LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQ 125
Query: 392 TASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP--- 448
A + YL ++HRD+ N+L+ + VK+ DFGL++L + P
Sbjct: 126 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 449 GYVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
++ H+ Y T +SDV+S+GV + EL++
Sbjct: 186 MALESILHRIY--THQSDVWSYGVTVWELMT 214
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 102/211 (48%), Gaps = 24/211 (11%)
Query: 282 NDFSREKELGDGGFGTVYYG-KLKDGREV----AVKRLYDNNYRRV-EQFMNEVEILTRL 335
+F + K LG G FGTVY G + +G +V A+K L + + ++ ++E ++ +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 336 RHKNLVSLFG-CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHG---LLTWPIRMNIAIE 391
+ ++ L G C + Q L+ + + G + D + + G LL W ++
Sbjct: 75 DNPHVCRLLGICLTSTVQ---LITQLMPFGXLLDYVREHKDNIGSQYLLNW------CVQ 125
Query: 392 TASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP--- 448
A + YL ++HRD+ N+L+ + VK+ DFGL++L + P
Sbjct: 126 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 449 GYVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
++ H+ Y T +SDV+S+GV + EL++
Sbjct: 186 MALESILHRIY--THQSDVWSYGVTVWELMT 214
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 102/211 (48%), Gaps = 24/211 (11%)
Query: 282 NDFSREKELGDGGFGTVYYG-KLKDGREV----AVKRLYDNNYRRV-EQFMNEVEILTRL 335
+F + K LG G FGTVY G + +G +V A+K L + + ++ ++E ++ +
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 336 RHKNLVSLFG-CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHG---LLTWPIRMNIAIE 391
+ ++ L G C + Q L+ + + G + D + + G LL W ++
Sbjct: 79 DNPHVCRLLGICLTSTVQ---LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQ 129
Query: 392 TASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP--- 448
A + YL ++HRD+ N+L+ + VK+ DFGL++L + P
Sbjct: 130 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 189
Query: 449 GYVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
++ H+ Y T +SDV+S+GV + EL++
Sbjct: 190 MALESILHRIY--THQSDVWSYGVTVWELMT 218
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 102/211 (48%), Gaps = 24/211 (11%)
Query: 282 NDFSREKELGDGGFGTVYYG-KLKDGREV----AVKRLYDNNYRRV-EQFMNEVEILTRL 335
+F + K LG G FGTVY G + +G +V A+K L + + ++ ++E ++ +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 336 RHKNLVSLFG-CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHG---LLTWPIRMNIAIE 391
+ ++ L G C + Q L+ + + G + D + + G LL W ++
Sbjct: 77 DNPHVCRLLGICLTSTVQ---LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQ 127
Query: 392 TASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP--- 448
A + YL ++HRD+ N+L+ + VK+ DFGL++L + P
Sbjct: 128 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 187
Query: 449 GYVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
++ H+ Y T +SDV+S+GV + EL++
Sbjct: 188 MALESILHRIY--THQSDVWSYGVTVWELMT 216
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 105/224 (46%), Gaps = 37/224 (16%)
Query: 288 KELGDGGFG-----TVYYGKLKDG-REVAVKRLYDN-NYRRVEQFMNEVEILTRLRHKNL 340
K LG+G FG T ++ K + G VAVK L +N + + ++E +L ++ H ++
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRA--------------------KHGLL 380
+ L+G S+ LLL+ E+ G++ L R L
Sbjct: 89 IKLYGACSQ-DGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERAL 147
Query: 381 TWPIRMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHV 440
T ++ A + + + YL ++HRD+ NIL+ +K++DFGLSR DV
Sbjct: 148 TMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSR----DVYEE 203
Query: 441 STAPQGTPGYVDPEYHQCYQLTD-----KSDVYSFGVVLIELIS 479
+ + + G + ++ L D +SDV+SFGV+L E+++
Sbjct: 204 DSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 102/211 (48%), Gaps = 24/211 (11%)
Query: 282 NDFSREKELGDGGFGTVYYG-KLKDGREV----AVKRLYDNNYRRV-EQFMNEVEILTRL 335
+F + K LG G FGTVY G + +G +V A+K L + + ++ ++E ++ +
Sbjct: 25 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 84
Query: 336 RHKNLVSLFG-CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHG---LLTWPIRMNIAIE 391
+ ++ L G C + Q L+ + + G + D + + G LL W ++
Sbjct: 85 DNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQ 135
Query: 392 TASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP--- 448
A + YL ++HRD+ N+L+ + VK+ DFGL++L + P
Sbjct: 136 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 195
Query: 449 GYVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
++ H+ Y T +SDV+S+GV + EL++
Sbjct: 196 MALESILHRIY--THQSDVWSYGVTVWELMT 224
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 99/204 (48%), Gaps = 9/204 (4%)
Query: 280 ATNDFSREKELGDGGFGTVYYGKLK-DGREVAVKRL-YDNNYRRV-EQFMNEVEILTRLR 336
+ +F + +++G+G +G VY + K G VA+K++ D V + E+ +L L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 337 HKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASAL 396
H N+V L ++ L LV+E V + D + + P+ + + L
Sbjct: 64 HPNIVKLLDVIHTENK-LYLVFEHVDQDL---KKFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 397 AYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPE-Y 455
A+ H+ ++HRD+K N+L+++ +K+ADFGL+R F + V T Y PE
Sbjct: 120 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHEVVTLWYRAPEIL 178
Query: 456 HQCYQLTDKSDVYSFGVVLIELIS 479
C + D++S G + E+++
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 102/211 (48%), Gaps = 24/211 (11%)
Query: 282 NDFSREKELGDGGFGTVYYG-KLKDGREV----AVKRLYDNNYRRV-EQFMNEVEILTRL 335
+F + K LG G FGTVY G + +G +V A+K L + + ++ ++E ++ +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 336 RHKNLVSLFG-CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHG---LLTWPIRMNIAIE 391
+ ++ L G C + Q L+ + + G + D + + G LL W ++
Sbjct: 78 DNPHVCRLLGICLTSTVQ---LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQ 128
Query: 392 TASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP--- 448
A + YL ++HRD+ N+L+ + VK+ DFGL++L + P
Sbjct: 129 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 188
Query: 449 GYVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
++ H+ Y T +SDV+S+GV + EL++
Sbjct: 189 MALESILHRIY--THQSDVWSYGVTVWELMT 217
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 102/211 (48%), Gaps = 24/211 (11%)
Query: 282 NDFSREKELGDGGFGTVYYG-KLKDGREV----AVKRLYDNNYRRV-EQFMNEVEILTRL 335
+F + K LG G FGTVY G + +G +V A+K L + + ++ ++E ++ +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 336 RHKNLVSLFG-CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHG---LLTWPIRMNIAIE 391
+ ++ L G C + Q L+ + + G + D + + G LL W ++
Sbjct: 75 DNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQ 125
Query: 392 TASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP--- 448
A + YL ++HRD+ N+L+ + VK+ DFGL++L + P
Sbjct: 126 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 449 GYVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
++ H+ Y T +SDV+S+GV + EL++
Sbjct: 186 MALESILHRIY--THQSDVWSYGVTVWELMT 214
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 107/220 (48%), Gaps = 20/220 (9%)
Query: 281 TNDFSREKELGDGGFGTVYYGKLKD-GREVAVK-----RLYDNNYRRVEQFMNEVEILTR 334
++++ ++ELG G F V K G E A K +L +++++E+ E I +
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLER---EARICRK 84
Query: 335 LRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETAS 394
L+H N+V L S L V++ V G +L D + + +
Sbjct: 85 LQHPNIVRLHDSIQEESFHYL-VFDLVTGG----ELFEDIVAREFYSEADASHCIQQILE 139
Query: 395 ALAYLHASDIIHRDVKTNNILLDS---NFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYV 451
++AY H++ I+HR++K N+LL S VK+ADFGL+ ++ + GTPGY+
Sbjct: 140 SIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYL 197
Query: 452 DPEYHQCYQLTDKSDVYSFGVVL-IELISSMPAVDMNRHR 490
PE + + D+++ GV+L I L+ P D ++HR
Sbjct: 198 SPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR 237
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 101/226 (44%), Gaps = 24/226 (10%)
Query: 273 SYSDLAEAT-NDFSREKELGDGGFGTVYYGKLK------DGREVAVKRLYDNNYRRVE-Q 324
S SDL E + + + LG G FG VY G++ +VAVK L + + E
Sbjct: 38 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 97
Query: 325 FMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDR---AKHGLLT 381
F+ E I+++ H+N+V G S S ++ E +A G + L R ++ L
Sbjct: 98 FLMEALIISKFNHQNIVRCIG-VSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLA 156
Query: 382 WPIRMNIAIETASALAYLHASDIIHRDVKTNNILL---DSNFCVKVADFGLSRLFPLDVT 438
+++A + A YL + IHRD+ N LL K+ DFG++R D+
Sbjct: 157 MLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIY 212
Query: 439 HVSTAPQGTPG-----YVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
+G ++ PE T K+D +SFGV+L E+ S
Sbjct: 213 RAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 103/224 (45%), Gaps = 30/224 (13%)
Query: 282 NDFSREKELGDGGFGTVY----YGKLKD--GREVAVKRLYDNNY-RRVEQFMNEVEILTR 334
N S K LG G FG V YG +K VAVK L + + E M+E+++L+
Sbjct: 39 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 98
Query: 335 L-RHKNLVSLFG-CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLL---TWPIRM--- 386
L H N+V+L G CT L++ E+ G + + L R + + T P M
Sbjct: 99 LGNHMNIVNLLGACT--IGGPTLVITEYCCYGDLLNFLR--RKRDSFICSKTSPAIMEDD 154
Query: 387 ----------NIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLD 436
+ + + A +A+L + + IHRD+ NILL K+ DFGL+R D
Sbjct: 155 ELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKND 214
Query: 437 VTHVSTAPQGTP-GYVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
+V P ++ PE T +SDV+S+G+ L EL S
Sbjct: 215 SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 102/211 (48%), Gaps = 24/211 (11%)
Query: 282 NDFSREKELGDGGFGTVYYG-KLKDGREV----AVKRLYDNNYRRV-EQFMNEVEILTRL 335
+F + K LG G FGTVY G + +G +V A+K L + + ++ ++E ++ +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 336 RHKNLVSLFG-CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHG---LLTWPIRMNIAIE 391
+ ++ L G C + Q L+ + + G + D + + G LL W ++
Sbjct: 75 DNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQ 125
Query: 392 TASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP--- 448
A + YL ++HRD+ N+L+ + VK+ DFGL++L + P
Sbjct: 126 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 449 GYVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
++ H+ Y T +SDV+S+GV + EL++
Sbjct: 186 MALESILHRIY--THQSDVWSYGVTVWELMT 214
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 103/219 (47%), Gaps = 16/219 (7%)
Query: 271 IFSYSDLAEATNDFSREKELGDGGFGTVYYGKLKDG---REVAVKRLYDNNYRRVEQFMN 327
+F S + + R K+LG G +G V + K R + + R + + +
Sbjct: 26 MFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLE 85
Query: 328 EVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQL-HGDRAKHGLLTWPIRM 386
EV +L L H N++ L+ + LV E G + D++ H R K + +
Sbjct: 86 EVAVLKLLDHPNIMKLYDFFED-KRNYYLVMECYKGGELFDEIIH--RMKFNEVDAAV-- 140
Query: 387 NIAIETASALAYLHASDIIHRDVKTNNILLDS---NFCVKVADFGLSRLFPLDVTHVSTA 443
I + S + YLH +I+HRD+K N+LL+S + +K+ DFGLS +F +
Sbjct: 141 -IIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVF--ENQKKMKE 197
Query: 444 PQGTPGYVDPEYHQCYQLTDKSDVYSFGVVLIELISSMP 482
GT Y+ PE + + +K DV+S GV+L L++ P
Sbjct: 198 RLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYP 235
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 102/211 (48%), Gaps = 24/211 (11%)
Query: 282 NDFSREKELGDGGFGTVYYG-KLKDGREV----AVKRLYDNNYRRV-EQFMNEVEILTRL 335
+F + K LG G FGTVY G + +G +V A+K L + + ++ ++E ++ +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 336 RHKNLVSLFG-CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHG---LLTWPIRMNIAIE 391
+ ++ L G C + Q L+ + + G + D + + G LL W ++
Sbjct: 78 DNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQ 128
Query: 392 TASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP--- 448
A + YL ++HRD+ N+L+ + VK+ DFGL++L + P
Sbjct: 129 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 188
Query: 449 GYVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
++ H+ Y T +SDV+S+GV + EL++
Sbjct: 189 MALESILHRIY--THQSDVWSYGVTVWELMT 217
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 102/211 (48%), Gaps = 24/211 (11%)
Query: 282 NDFSREKELGDGGFGTVYYG-KLKDGREV----AVKRLYDNNYRRV-EQFMNEVEILTRL 335
+F + K LG G FGTVY G + +G +V A+K L + + ++ ++E ++ +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 336 RHKNLVSLFG-CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHG---LLTWPIRMNIAIE 391
+ ++ L G C + Q L+ + + G + D + + G LL W ++
Sbjct: 78 DNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQ 128
Query: 392 TASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP--- 448
A + YL ++HRD+ N+L+ + VK+ DFGL++L + P
Sbjct: 129 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 188
Query: 449 GYVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
++ H+ Y T +SDV+S+GV + EL++
Sbjct: 189 MALESILHRIY--THQSDVWSYGVTVWELMT 217
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 102/211 (48%), Gaps = 24/211 (11%)
Query: 282 NDFSREKELGDGGFGTVYYG-KLKDGREV----AVKRLYDNNYRRV-EQFMNEVEILTRL 335
+F + K LG G FGTVY G + +G +V A+K L + + ++ ++E ++ +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 336 RHKNLVSLFG-CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHG---LLTWPIRMNIAIE 391
+ ++ L G C + Q L+ + + G + D + + G LL W ++
Sbjct: 78 DNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQ 128
Query: 392 TASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP--- 448
A + YL ++HRD+ N+L+ + VK+ DFGL++L + P
Sbjct: 129 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 188
Query: 449 GYVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
++ H+ Y T +SDV+S+GV + EL++
Sbjct: 189 MALESILHRIY--THQSDVWSYGVTVWELMT 217
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 102/218 (46%), Gaps = 21/218 (9%)
Query: 276 DLAEATNDFSREKELGDGGFGTVYYGKLKDGRE-VAVKRLYDNNYRRVEQFMN-----EV 329
D+ + + LG+G F TVY + K+ + VA+K++ + + +N E+
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREI 63
Query: 330 EILTRLRHKNLVSL---FGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRM 386
++L L H N++ L FG S S LV++F+ L + L+ P +
Sbjct: 64 KLLQELSHPNIIGLLDAFGHKSNIS----LVFDFMET-----DLEVIIKDNSLVLTPSHI 114
Query: 387 NI-AIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQ 445
+ T L YLH I+HRD+K NN+LLD N +K+ADFGL++ F
Sbjct: 115 KAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFG-SPNRAYXHQV 173
Query: 446 GTPGYVDPEYHQCYQLTDKS-DVYSFGVVLIELISSMP 482
T Y PE ++ D+++ G +L EL+ +P
Sbjct: 174 VTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVP 211
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 102/211 (48%), Gaps = 24/211 (11%)
Query: 282 NDFSREKELGDGGFGTVYYG-KLKDGREV----AVKRLYDNNYRRV-EQFMNEVEILTRL 335
+F + K LG G FGTVY G + +G +V A+K L + + ++ ++E ++ +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 336 RHKNLVSLFG-CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHG---LLTWPIRMNIAIE 391
+ ++ L G C + Q L+ + + G + D + + G LL W ++
Sbjct: 77 DNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQ 127
Query: 392 TASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP--- 448
A + YL ++HRD+ N+L+ + VK+ DFGL++L + P
Sbjct: 128 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 187
Query: 449 GYVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
++ H+ Y T +SDV+S+GV + EL++
Sbjct: 188 MALESILHRIY--THQSDVWSYGVTVWELMT 216
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 130/311 (41%), Gaps = 47/311 (15%)
Query: 254 ENERTDLETGTVYFGVPIFSYSDLAEATNDFSREKELGDGGFGTVYYGKLKDGREVAVKR 313
E + D ET V G F D+ LG G GT+ Y + D R+VAVKR
Sbjct: 8 EQDDGDEETSVVIVGKISFCPKDV------------LGHGAEGTIVYRGMFDNRDVAVKR 55
Query: 314 LYDNNYRRVEQFMNEVEILTRL-RHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHG 372
+ + ++ EV++L H N++ F CT + Q + E A
Sbjct: 56 ILPECFSFADR---EVQLLRESDEHPNVIRYF-CTEKDRQFQYIAIELCAATLQEYVEQK 111
Query: 373 DRAKHGLLTWPIRMNIAIETASALAYLHASDIIHRDVKTNNILLD-----SNFCVKVADF 427
D A GL PI + +T S LA+LH+ +I+HRD+K +NIL+ ++DF
Sbjct: 112 DFAHLGL--EPI--TLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDF 167
Query: 428 GLSRLFPLDVTHVS--TAPQGTPGYVDPEY--HQCYQ-LTDKSDVYSFGVVLIELISSMP 482
GL + + S + GT G++ PE C + T D++S G V +IS
Sbjct: 168 GLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISE-- 225
Query: 483 AVDMNRHRHEINLANLAINKIQKCAFDELIDPCLGFESDEEVKRMTTSVAELAFLCLQQN 542
H +L A + C+ D CL E E+V EL + +
Sbjct: 226 ----GSHPFGKSLQRQANILLGACSLD-----CLHPEKHEDV-----IARELIEKMIAMD 271
Query: 543 KELRPSMEEVL 553
+ RPS + VL
Sbjct: 272 PQKRPSAKHVL 282
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 102/211 (48%), Gaps = 24/211 (11%)
Query: 282 NDFSREKELGDGGFGTVYYG-KLKDGREV----AVKRLYDNNYRRV-EQFMNEVEILTRL 335
+F + K LG G FGTVY G + +G +V A+K L + + ++ ++E ++ +
Sbjct: 21 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 80
Query: 336 RHKNLVSLFG-CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHG---LLTWPIRMNIAIE 391
+ ++ L G C + Q L+ + + G + D + + G LL W ++
Sbjct: 81 DNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQ 131
Query: 392 TASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP--- 448
A + YL ++HRD+ N+L+ + VK+ DFGL++L + P
Sbjct: 132 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 191
Query: 449 GYVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
++ H+ Y T +SDV+S+GV + EL++
Sbjct: 192 MALESILHRIY--THQSDVWSYGVTVWELMT 220
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 103/224 (45%), Gaps = 30/224 (13%)
Query: 282 NDFSREKELGDGGFGTVY----YGKLKD--GREVAVKRLYDNNY-RRVEQFMNEVEILTR 334
N S K LG G FG V YG +K VAVK L + + E M+E+++L+
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 335 L-RHKNLVSLFG-CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLL---TWPIRM--- 386
L H N+V+L G CT L++ E+ G + + L R + + T P M
Sbjct: 106 LGNHMNIVNLLGACT--IGGPTLVITEYCCYGDLLNFLR--RKRDSFICSKTSPAIMEDD 161
Query: 387 ----------NIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLD 436
+ + + A +A+L + + IHRD+ NILL K+ DFGL+R D
Sbjct: 162 ELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARHIKND 221
Query: 437 VTHVSTAPQGTP-GYVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
+V P ++ PE T +SDV+S+G+ L EL S
Sbjct: 222 SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 101/226 (44%), Gaps = 24/226 (10%)
Query: 273 SYSDLAEAT-NDFSREKELGDGGFGTVYYGKLK------DGREVAVKRLYDNNYRRVE-Q 324
S SDL E + + + LG G FG VY G++ +VAVK L + + E
Sbjct: 61 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 120
Query: 325 FMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDR---AKHGLLT 381
F+ E I+++ H+N+V G S S ++ E +A G + L R ++ L
Sbjct: 121 FLMEALIISKFNHQNIVRCIG-VSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLA 179
Query: 382 WPIRMNIAIETASALAYLHASDIIHRDVKTNNILL---DSNFCVKVADFGLSRLFPLDVT 438
+++A + A YL + IHRD+ N LL K+ DFG++R D+
Sbjct: 180 MLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIY 235
Query: 439 HVSTAPQGTPG-----YVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
+G ++ PE T K+D +SFGV+L E+ S
Sbjct: 236 RAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 103/224 (45%), Gaps = 30/224 (13%)
Query: 282 NDFSREKELGDGGFGTVY----YGKLKD--GREVAVKRLYDNNY-RRVEQFMNEVEILTR 334
N S K LG G FG V YG +K VAVK L + + E M+E+++L+
Sbjct: 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82
Query: 335 L-RHKNLVSLFG-CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLL---TWPIRM--- 386
L H N+V+L G CT L++ E+ G + + L R + + T P M
Sbjct: 83 LGNHMNIVNLLGACT--IGGPTLVITEYCCYGDLLNFLR--RKRDSFICSKTSPAIMEDD 138
Query: 387 ----------NIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLD 436
+ + + A +A+L + + IHRD+ NILL K+ DFGL+R D
Sbjct: 139 ELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKND 198
Query: 437 VTHVSTAPQGTP-GYVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
+V P ++ PE T +SDV+S+G+ L EL S
Sbjct: 199 SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 102/211 (48%), Gaps = 24/211 (11%)
Query: 282 NDFSREKELGDGGFGTVYYG-KLKDGREV----AVKRLYDNNYRRV-EQFMNEVEILTRL 335
+F + K LG G FGTVY G + +G +V A+K L + + ++ ++E ++ +
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 336 RHKNLVSLFG-CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHG---LLTWPIRMNIAIE 391
+ ++ L G C + Q L+ + + G + D + + G LL W ++
Sbjct: 82 DNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQ 132
Query: 392 TASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP--- 448
A + YL ++HRD+ N+L+ + VK+ DFGL++L + P
Sbjct: 133 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 192
Query: 449 GYVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
++ H+ Y T +SDV+S+GV + EL++
Sbjct: 193 MALESILHRIY--THQSDVWSYGVTVWELMT 221
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 103/224 (45%), Gaps = 30/224 (13%)
Query: 282 NDFSREKELGDGGFGTVY----YGKLKD--GREVAVKRLYDNNY-RRVEQFMNEVEILTR 334
N S K LG G FG V YG +K VAVK L + + E M+E+++L+
Sbjct: 41 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 100
Query: 335 L-RHKNLVSLFG-CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLL---TWPIRM--- 386
L H N+V+L G CT L++ E+ G + + L R + + T P M
Sbjct: 101 LGNHMNIVNLLGACT--IGGPTLVITEYCCYGDLLNFLR--RKRDSFICSKTSPAIMEDD 156
Query: 387 ----------NIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLD 436
+ + + A +A+L + + IHRD+ NILL K+ DFGL+R D
Sbjct: 157 ELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKND 216
Query: 437 VTHVSTAPQGTP-GYVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
+V P ++ PE T +SDV+S+G+ L EL S
Sbjct: 217 SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 102/211 (48%), Gaps = 24/211 (11%)
Query: 282 NDFSREKELGDGGFGTVYYG-KLKDGREV----AVKRLYDNNYRRV-EQFMNEVEILTRL 335
+F + K LG G FGTVY G + +G +V A+K L + + ++ ++E ++ +
Sbjct: 12 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 71
Query: 336 RHKNLVSLFG-CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHG---LLTWPIRMNIAIE 391
+ ++ L G C + Q L+ + + G + D + + G LL W ++
Sbjct: 72 DNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQ 122
Query: 392 TASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP--- 448
A + YL ++HRD+ N+L+ + VK+ DFGL++L + P
Sbjct: 123 IAEGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 182
Query: 449 GYVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
++ H+ Y T +SDV+S+GV + EL++
Sbjct: 183 MALESILHRIY--THQSDVWSYGVTVWELMT 211
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 92/205 (44%), Gaps = 11/205 (5%)
Query: 281 TNDFSREKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRV---EQFMNEVEILTRLRH 337
D+ + LG+G +G V + E ++ D R V E E+ I L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEIXINKMLNH 64
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
+N+V +G R L E+ + G + D++ D + P + + +
Sbjct: 65 ENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIG----MPEPDAQRFFHQLMAGVV 119
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPL-DVTHVSTAPQGTPGYVDPEYH 456
YLH I HRD+K N+LLD +K++DFGL+ +F + + GT YV PE
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 179
Query: 457 QCYQL-TDKSDVYSFGVVLIELISS 480
+ + + DV+S G+VL +++
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 95/217 (43%), Gaps = 21/217 (9%)
Query: 280 ATNDFSREKELGDGGFGTVYYGKLKDGREV----AVKRLYDNNYRRVEQFMNEVEILTRL 335
DF + +G G + V +LK + VK+ N+ ++ E + +
Sbjct: 50 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQA 109
Query: 336 -RHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRA---KHGLLTWPIRMNIAIE 391
H LV L C S+ L V E+V G + + R +H + E
Sbjct: 110 SNHPFLVGLHSCFQTESR-LFFVIEYVNGGDLMFHMQRQRKLPEEHARF-------YSAE 161
Query: 392 TASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSR--LFPLDVTHVSTAPQGTPG 449
+ AL YLH II+RD+K +N+LLDS +K+ D+G+ + L P D T GTP
Sbjct: 162 ISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFC---GTPN 218
Query: 450 YVDPEYHQCYQLTDKSDVYSFGVVLIELISSMPAVDM 486
Y+ PE + D ++ GV++ E+++ D+
Sbjct: 219 YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 255
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 102/211 (48%), Gaps = 24/211 (11%)
Query: 282 NDFSREKELGDGGFGTVYYG-KLKDGREV----AVKRLYDNNYRRV-EQFMNEVEILTRL 335
+F + K LG G FGTVY G + +G +V A+K L + + ++ ++E ++ +
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 68
Query: 336 RHKNLVSLFG-CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHG---LLTWPIRMNIAIE 391
+ ++ L G C + Q L+ + + G + D + + G LL W ++
Sbjct: 69 DNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQ 119
Query: 392 TASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP--- 448
A + YL ++HRD+ N+L+ + VK+ DFGL++L + P
Sbjct: 120 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 179
Query: 449 GYVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
++ H+ Y T +SDV+S+GV + EL++
Sbjct: 180 MALESILHRIY--THQSDVWSYGVTVWELMT 208
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 92/205 (44%), Gaps = 11/205 (5%)
Query: 281 TNDFSREKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRV---EQFMNEVEILTRLRH 337
D+ + LG+G +G V + E ++ D R V E E+ I L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEIXINKMLNH 63
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
+N+V +G R L E+ + G + D++ D + P + + +
Sbjct: 64 ENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIG----MPEPDAQRFFHQLMAGVV 118
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPL-DVTHVSTAPQGTPGYVDPEYH 456
YLH I HRD+K N+LLD +K++DFGL+ +F + + GT YV PE
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 178
Query: 457 QCYQL-TDKSDVYSFGVVLIELISS 480
+ + + DV+S G+VL +++
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 95/200 (47%), Gaps = 13/200 (6%)
Query: 287 EKELGDGGFGTV---YYGKLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLV 341
+KELG G FGTV YY K + VAVK L + N+ ++ + E ++ +L + +V
Sbjct: 16 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 75
Query: 342 SLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHA 401
+ G ++ +LV E G + L +R + + + + + YL
Sbjct: 76 RMIGICE--AESWMLVMEMAELGPLNKYLQQNRHVKDKNI----IELVHQVSMGMKYLEE 129
Query: 402 SDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGT--PGYVDPEYHQCY 459
S+ +HRD+ N+LL + K++DFGLS+ D G + PE Y
Sbjct: 130 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYY 189
Query: 460 QLTDKSDVYSFGVVLIELIS 479
+ + KSDV+SFGV++ E S
Sbjct: 190 KFSSKSDVWSFGVLMWEAFS 209
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 102/226 (45%), Gaps = 24/226 (10%)
Query: 273 SYSDLAEAT-NDFSREKELGDGGFGTVYYGKLK------DGREVAVKRLYDNNYRRVE-Q 324
S SDL E + + + LG G FG VY G++ +VAVK L + + E
Sbjct: 21 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 80
Query: 325 FMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDR---AKHGLLT 381
F+ E I+++ H+N+V G S S ++ E +A G + L R ++ L
Sbjct: 81 FLMEALIISKFNHQNIVRCIG-VSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLA 139
Query: 382 WPIRMNIAIETASALAYLHASDIIHRDVKTNNILL---DSNFCVKVADFGLSRLFPLDVT 438
+++A + A YL + IHRD+ N LL K+ DFG+++ D+
Sbjct: 140 MLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQ----DIY 195
Query: 439 HVSTAPQGTPG-----YVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
S +G ++ PE T K+D +SFGV+L E+ S
Sbjct: 196 RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 102/211 (48%), Gaps = 24/211 (11%)
Query: 282 NDFSREKELGDGGFGTVYYG-KLKDGREV----AVKRLYDNNYRRV-EQFMNEVEILTRL 335
+F + K LG G FGTVY G + +G +V A+K L + + ++ ++E ++ +
Sbjct: 40 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 99
Query: 336 RHKNLVSLFG-CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHG---LLTWPIRMNIAIE 391
+ ++ L G C + Q L+ + + G + D + + G LL W ++
Sbjct: 100 DNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQ 150
Query: 392 TASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP--- 448
A + YL ++HRD+ N+L+ + VK+ DFGL++L + P
Sbjct: 151 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 210
Query: 449 GYVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
++ H+ Y T +SDV+S+GV + EL++
Sbjct: 211 MALESILHRIY--THQSDVWSYGVTVWELMT 239
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 117/236 (49%), Gaps = 28/236 (11%)
Query: 279 EATNDFSREKELGDGGFGTVYYGK-LKDGREVAVKRLYDNNYRRVEQF----MNEVEILT 333
+ + + + ++G G FG V+ + K G++VA+K++ N + E F + E++IL
Sbjct: 15 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK--EGFPITALREIKILQ 72
Query: 334 RLRHKNLVSLFG-CTSRYS------QGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRM 386
L+H+N+V+L C ++ S + LV++F + +A L K L M
Sbjct: 73 LLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVM 131
Query: 387 NIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQG 446
+ + + L Y+H + I+HRD+K N+L+ + +K+ADFGL+R F L ++ P
Sbjct: 132 QMLL---NGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSL---AKNSQPNR 185
Query: 447 TPGYVDPEYHQCYQLTDKS-------DVYSFGVVLIELISSMPAVDMNRHRHEINL 495
V +++ +L D++ G ++ E+ + P + N +H++ L
Sbjct: 186 YXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLAL 241
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 95/217 (43%), Gaps = 21/217 (9%)
Query: 280 ATNDFSREKELGDGGFGTVYYGKLKDGREV----AVKRLYDNNYRRVEQFMNEVEILTRL 335
DF + +G G + V +LK + VK+ N+ ++ E + +
Sbjct: 18 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQA 77
Query: 336 -RHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRA---KHGLLTWPIRMNIAIE 391
H LV L C S+ L V E+V G + + R +H + E
Sbjct: 78 SNHPFLVGLHSCFQTESR-LFFVIEYVNGGDLMFHMQRQRKLPEEHARF-------YSAE 129
Query: 392 TASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSR--LFPLDVTHVSTAPQGTPG 449
+ AL YLH II+RD+K +N+LLDS +K+ D+G+ + L P D T GTP
Sbjct: 130 ISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFC---GTPN 186
Query: 450 YVDPEYHQCYQLTDKSDVYSFGVVLIELISSMPAVDM 486
Y+ PE + D ++ GV++ E+++ D+
Sbjct: 187 YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 223
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 103/209 (49%), Gaps = 20/209 (9%)
Query: 282 NDFSREKELGDGGFGTVYYGKL---KDGREV-AVKRLYDNNYR---RVEQFMNEVEILTR 334
+ F K LG G FG V+ K D R++ A+K L + RV M E +IL
Sbjct: 25 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKM-ERDILVE 83
Query: 335 LRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWP-IRMNIAIETA 393
+ H +V L + L L+ +F+ G + +L +K + T ++ +A E A
Sbjct: 84 VNHPFIVKLHYAFQTEGK-LYLILDFLRGGDLFTRL----SKEVMFTEEDVKFYLA-ELA 137
Query: 394 SALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQ--GTPGYV 451
AL +LH+ II+RD+K NILLD +K+ DFGLS+ + H A GT Y+
Sbjct: 138 LALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFCGTVEYM 194
Query: 452 DPEYHQCYQLTDKSDVYSFGVVLIELISS 480
PE T +D +SFGV++ E+++
Sbjct: 195 APEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 103/209 (49%), Gaps = 20/209 (9%)
Query: 282 NDFSREKELGDGGFGTVYYGKL---KDGREV-AVKRLYDNNYR---RVEQFMNEVEILTR 334
+ F K LG G FG V+ K D R++ A+K L + RV M E +IL
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKM-ERDILVE 82
Query: 335 LRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWP-IRMNIAIETA 393
+ H +V L + L L+ +F+ G + +L +K + T ++ +A E A
Sbjct: 83 VNHPFIVKLHYAFQTEGK-LYLILDFLRGGDLFTRL----SKEVMFTEEDVKFYLA-ELA 136
Query: 394 SALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQ--GTPGYV 451
AL +LH+ II+RD+K NILLD +K+ DFGLS+ + H A GT Y+
Sbjct: 137 LALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFCGTVEYM 193
Query: 452 DPEYHQCYQLTDKSDVYSFGVVLIELISS 480
PE T +D +SFGV++ E+++
Sbjct: 194 APEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 95/199 (47%), Gaps = 11/199 (5%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRV--EQFMNEVEILTRLRHKN 339
+DF R ELG G G V + + + ++L + Q + E+++L
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 75
Query: 340 LVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYL 399
+V +G YS G + + +G DQ+ + + + I ++I LAYL
Sbjct: 76 IVGFYGAF--YSDGEISICMEHMDGGSLDQVLKEAKR---IPEEILGKVSIAVLRGLAYL 130
Query: 400 HAS-DIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQC 458
I+HRDVK +NIL++S +K+ DFG+S + ++ + GT Y+ PE Q
Sbjct: 131 REKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQL---IDSMANSFVGTRSYMAPERLQG 187
Query: 459 YQLTDKSDVYSFGVVLIEL 477
+ +SD++S G+ L+EL
Sbjct: 188 THYSVQSDIWSMGLSLVEL 206
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 103/224 (45%), Gaps = 30/224 (13%)
Query: 282 NDFSREKELGDGGFGTVY----YGKLKD--GREVAVKRLYDNNY-RRVEQFMNEVEILTR 334
N S K LG G FG V YG +K VAVK L + + E M+E+++L+
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 335 L-RHKNLVSLFG-CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLL---TWPIRM--- 386
L H N+V+L G CT L++ E+ G + + L R + + T P M
Sbjct: 106 LGNHMNIVNLLGACT--IGGPTLVITEYCCYGDLLNFLR--RKRDSFICSKTSPAIMEDD 161
Query: 387 ----------NIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLD 436
+ + + A +A+L + + IHRD+ NILL K+ DFGL+R D
Sbjct: 162 ELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKND 221
Query: 437 VTHVSTAPQGTP-GYVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
+V P ++ PE T +SDV+S+G+ L EL S
Sbjct: 222 SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 117/236 (49%), Gaps = 28/236 (11%)
Query: 279 EATNDFSREKELGDGGFGTVYYGK-LKDGREVAVKRLYDNNYRRVEQF----MNEVEILT 333
+ + + + ++G G FG V+ + K G++VA+K++ N + E F + E++IL
Sbjct: 15 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK--EGFPITALREIKILQ 72
Query: 334 RLRHKNLVSLFG-CTSRYSQ------GLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRM 386
L+H+N+V+L C ++ S + LV++F + +A L K L M
Sbjct: 73 LLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHD-LAGLLSNVLVKFTLSEIKRVM 131
Query: 387 NIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQG 446
+ + + L Y+H + I+HRD+K N+L+ + +K+ADFGL+R F L ++ P
Sbjct: 132 QMLL---NGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSL---AKNSQPNR 185
Query: 447 TPGYVDPEYHQCYQLTDKS-------DVYSFGVVLIELISSMPAVDMNRHRHEINL 495
V +++ +L D++ G ++ E+ + P + N +H++ L
Sbjct: 186 YXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLAL 241
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 103/209 (49%), Gaps = 20/209 (9%)
Query: 282 NDFSREKELGDGGFGTVYYGKL---KDGREV-AVKRLYDNNYR---RVEQFMNEVEILTR 334
+ F K LG G FG V+ K D R++ A+K L + RV M E +IL
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKM-ERDILVE 82
Query: 335 LRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWP-IRMNIAIETA 393
+ H +V L + L L+ +F+ G + +L +K + T ++ +A E A
Sbjct: 83 VNHPFIVKLHYAFQTEGK-LYLILDFLRGGDLFTRL----SKEVMFTEEDVKFYLA-ELA 136
Query: 394 SALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQ--GTPGYV 451
AL +LH+ II+RD+K NILLD +K+ DFGLS+ + H A GT Y+
Sbjct: 137 LALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFCGTVEYM 193
Query: 452 DPEYHQCYQLTDKSDVYSFGVVLIELISS 480
PE T +D +SFGV++ E+++
Sbjct: 194 APEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 95/217 (43%), Gaps = 21/217 (9%)
Query: 280 ATNDFSREKELGDGGFGTVYYGKLKDGREV----AVKRLYDNNYRRVEQFMNEVEILTRL 335
DF + +G G + V +LK + VK+ N+ ++ E + +
Sbjct: 7 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQA 66
Query: 336 -RHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRA---KHGLLTWPIRMNIAIE 391
H LV L C S+ L V E+V G + + R +H + E
Sbjct: 67 SNHPFLVGLHSCFQTESR-LFFVIEYVNGGDLMFHMQRQRKLPEEHARF-------YSAE 118
Query: 392 TASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSR--LFPLDVTHVSTAPQGTPG 449
+ AL YLH II+RD+K +N+LLDS +K+ D+G+ + L P D T GTP
Sbjct: 119 ISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFC---GTPN 175
Query: 450 YVDPEYHQCYQLTDKSDVYSFGVVLIELISSMPAVDM 486
Y+ PE + D ++ GV++ E+++ D+
Sbjct: 176 YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 212
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 97/226 (42%), Gaps = 33/226 (14%)
Query: 281 TNDFSREKELGDGGFGTVYYGK-LKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKN 339
+DF LG G FG V + D R A+K++ + ++ ++EV +L L H+
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVXLLASLNHQY 63
Query: 340 LVSLFGC------------TSRYSQGLLLVYEFVANGTVADQLHGDRAKHGL-LTWPIRM 386
+V + + L + E+ N T+ D +H + W +
Sbjct: 64 VVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFR 123
Query: 387 NIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSR-------LFPLDVTH 439
I AL+Y+H+ IIHR++K NI +D + VK+ DFGL++ + LD +
Sbjct: 124 QIL----EALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 440 VS------TAPQGTPGYVDPE-YHQCYQLTDKSDVYSFGVVLIELI 478
+ T+ GT YV E +K D YS G++ E I
Sbjct: 180 LPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 117/236 (49%), Gaps = 28/236 (11%)
Query: 279 EATNDFSREKELGDGGFGTVYYGK-LKDGREVAVKRLYDNNYRRVEQF----MNEVEILT 333
+ + + + ++G G FG V+ + K G++VA+K++ N + E F + E++IL
Sbjct: 15 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK--EGFPITALREIKILQ 72
Query: 334 RLRHKNLVSLFG-CTSRYS------QGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRM 386
L+H+N+V+L C ++ S + LV++F + +A L K L M
Sbjct: 73 LLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVM 131
Query: 387 NIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQG 446
+ + + L Y+H + I+HRD+K N+L+ + +K+ADFGL+R F L ++ P
Sbjct: 132 QMLL---NGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSL---AKNSQPNR 185
Query: 447 TPGYVDPEYHQCYQLTDKS-------DVYSFGVVLIELISSMPAVDMNRHRHEINL 495
V +++ +L D++ G ++ E+ + P + N +H++ L
Sbjct: 186 YXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLAL 241
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 95/217 (43%), Gaps = 21/217 (9%)
Query: 280 ATNDFSREKELGDGGFGTVYYGKLKDGREV----AVKRLYDNNYRRVEQFMNEVEILTRL 335
DF + +G G + V +LK + VK+ N+ ++ E + +
Sbjct: 3 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQA 62
Query: 336 -RHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRA---KHGLLTWPIRMNIAIE 391
H LV L C S+ L V E+V G + + R +H + E
Sbjct: 63 SNHPFLVGLHSCFQTESR-LFFVIEYVNGGDLMFHMQRQRKLPEEHARF-------YSAE 114
Query: 392 TASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSR--LFPLDVTHVSTAPQGTPG 449
+ AL YLH II+RD+K +N+LLDS +K+ D+G+ + L P D T GTP
Sbjct: 115 ISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFC---GTPN 171
Query: 450 YVDPEYHQCYQLTDKSDVYSFGVVLIELISSMPAVDM 486
Y+ PE + D ++ GV++ E+++ D+
Sbjct: 172 YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 208
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 117/236 (49%), Gaps = 28/236 (11%)
Query: 279 EATNDFSREKELGDGGFGTVYYGK-LKDGREVAVKRLYDNNYRRVEQF----MNEVEILT 333
+ + + + ++G G FG V+ + K G++VA+K++ N + E F + E++IL
Sbjct: 14 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK--EGFPITALREIKILQ 71
Query: 334 RLRHKNLVSLFG-CTSRYS------QGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRM 386
L+H+N+V+L C ++ S + LV++F + +A L K L M
Sbjct: 72 LLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVM 130
Query: 387 NIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQG 446
+ + + L Y+H + I+HRD+K N+L+ + +K+ADFGL+R F L ++ P
Sbjct: 131 QMLL---NGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSL---AKNSQPNR 184
Query: 447 TPGYVDPEYHQCYQLTDKS-------DVYSFGVVLIELISSMPAVDMNRHRHEINL 495
V +++ +L D++ G ++ E+ + P + N +H++ L
Sbjct: 185 YXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLAL 240
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 31/210 (14%)
Query: 290 LGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTR--LRHKNLVSLFGC- 346
+G G +G V+ G L G VAVK + R + + E EI LRH N++
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIF---SSRDEQSWFRETEIYNTVLLRHDNILGFIASD 71
Query: 347 -TSRYSQG-LLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHAS-- 402
TSR S L L+ + +G++ D L + L + +A+ A LA+LH
Sbjct: 72 MTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLA-----LRLAVSAACGLAHLHVEIF 126
Query: 403 ------DIIHRDVKTNNILLDSNFCVKVADFGLSRLFPL--DVTHVSTAPQ-GTPGYVDP 453
I HRD K+ N+L+ SN +AD GL+ + D + P+ GT Y+ P
Sbjct: 127 GTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAP 186
Query: 454 EY------HQCYQLTDKSDVYSFGVVLIEL 477
E C++ +D+++FG+VL E+
Sbjct: 187 EVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 105/210 (50%), Gaps = 26/210 (12%)
Query: 289 ELGDGGFGTVYYGK-LKDG-REVAVKRLYDNNYRRVEQFM-----NEVEILTRLR---HK 338
E+G+G +G V+ + LK+G R VA+KR+ + E+ M EV +L L H
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRV---RVQTGEEGMPLSTIREVAVLRHLETFEHP 74
Query: 339 NLVSLFG-CT-SRYSQ--GLLLVYEFVANG--TVADQLHGDRAKHGLLTWPIRMNIAIET 392
N+V LF CT SR + L LV+E V T D++ + G+ T I+ ++ +
Sbjct: 75 NVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKV----PEPGVPTETIK-DMMFQL 129
Query: 393 ASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVD 452
L +LH+ ++HRD+K NIL+ S+ +K+ADFGL+R++ + S T Y
Sbjct: 130 LRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV--TLWYRA 187
Query: 453 PEYHQCYQLTDKSDVYSFGVVLIELISSMP 482
PE D++S G + E+ P
Sbjct: 188 PEVLLQSSYATPVDLWSVGCIFAEMFRRKP 217
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 92/205 (44%), Gaps = 11/205 (5%)
Query: 281 TNDFSREKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRV---EQFMNEVEILTRLRH 337
D+ + LG+G +G V + E ++ D R V E E+ I L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEIXINKMLNH 63
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
+N+V +G R L E+ + G + D++ D + P + + +
Sbjct: 64 ENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIG----MPEPDAQRFFHQLMAGVV 118
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPL-DVTHVSTAPQGTPGYVDPEYH 456
YLH I HRD+K N+LLD +K++DFGL+ +F + + GT YV PE
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 457 QCYQL-TDKSDVYSFGVVLIELISS 480
+ + + DV+S G+VL +++
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 95/204 (46%), Gaps = 11/204 (5%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKDGREV-AVKRLYDNNYRR---VEQFMNEVEILTRLRH 337
DF+ LG G FG V + K E+ AVK L + + VE M E +L
Sbjct: 341 TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGK 400
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
++ + L V E+V G + + + G P + A E A L
Sbjct: 401 PPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQ----QVGRFKEPHAVFYAAEIAIGLF 456
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQ 457
+L + II+RD+K +N++LDS +K+ADFG+ + D + GTP Y+ PE
Sbjct: 457 FLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV-TTKXFCGTPDYIAPEI-I 514
Query: 458 CYQLTDKS-DVYSFGVVLIELISS 480
YQ KS D ++FGV+L E+++
Sbjct: 515 AYQPYGKSVDWWAFGVLLYEMLAG 538
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 99/219 (45%), Gaps = 39/219 (17%)
Query: 293 GGFGTVYYGKL-KDGREVAVKRLYDNNYRRVEQFMNEVEILTR--LRHKNLVSLFGCTSR 349
G FG V+ +L D V + L D + + +E EI + ++H+NL+ R
Sbjct: 26 GRFGCVWKAQLMNDFVAVKIFPLQDK-----QSWQSEREIFSTPGMKHENLLQFIAAEKR 80
Query: 350 YSQ---GLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHAS---- 402
S L L+ F G++ D L G+ ++TW ++A + L+YLH
Sbjct: 81 GSNLEVELWLITAFHDKGSLTDYLKGN-----IITWNELCHVAETMSRGLSYLHEDVPWC 135
Query: 403 -------DIIHRDVKTNNILLDSNFCVKVADFGLSRLF----PLDVTHVSTAPQGTPGYV 451
I HRD K+ N+LL S+ +ADFGL+ F P TH GT Y+
Sbjct: 136 RGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQV---GTRRYM 192
Query: 452 DPEYHQC---YQLTD--KSDVYSFGVVLIELISSMPAVD 485
PE + +Q + D+Y+ G+VL EL+S A D
Sbjct: 193 APEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAAD 231
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 126/282 (44%), Gaps = 32/282 (11%)
Query: 280 ATNDF---SREKELGDGGFGTVYY-GKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRL 335
A N F S+ + LG G FG V+ + G ++A K + + E+ NE+ ++ +L
Sbjct: 84 AVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQL 143
Query: 336 RHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASA 395
H NL+ L+ + ++LV E+V G + D++ + L + M +
Sbjct: 144 DHANLIQLYDAFESKND-IVLVMEYVDGGELFDRIIDESYNLTELDTILFMK---QICEG 199
Query: 396 LAYLHASDIIHRDVKTNNILLDSNFC--VKVADFGLSRLF-PLDVTHVSTAPQGTPGYVD 452
+ ++H I+H D+K NIL + +K+ DFGL+R + P + V+ GTP ++
Sbjct: 200 IRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNF---GTPEFLA 256
Query: 453 PEYHQCYQLTDKSDVYSFGVVLIELISSM-PAVDMNRHRHEINLANLAINKIQKCAFDEL 511
PE ++ +D++S GV+ L+S + P + N +N I C +D
Sbjct: 257 PEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAE--------TLNNILACRWD-- 306
Query: 512 IDPCLGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVL 553
DEE + ++ E L + K R S E L
Sbjct: 307 -------LEDEEFQDISEEAKEFISKLLIKEKSWRISASEAL 341
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 101/203 (49%), Gaps = 16/203 (7%)
Query: 290 LGDGGFGTVYYGK-LKDGREVAVKRLYDNNYRRVEQFMN---EVEILTRLRHKNLVSLFG 345
LG+G FG V K ++VA+K + ++ + M E+ L LRH +++ L+
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 346 CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDII 405
+ + +++V E+ A G + D + + +T + A+ Y H I+
Sbjct: 77 VITTPTD-IVMVIEY-AGGELFDYI----VEKKRMTEDEGRRFFQQIICAIEYCHRHKIV 130
Query: 406 HRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEY--HQCYQLTD 463
HRD+K N+LLD N VK+ADFGLS + D + T+ G+P Y PE + Y
Sbjct: 131 HRDLKPENLLLDDNLNVKIADFGLSNIMT-DGNFLKTSC-GSPNYAAPEVINGKLYA-GP 187
Query: 464 KSDVYSFGVVL-IELISSMPAVD 485
+ DV+S G+VL + L+ +P D
Sbjct: 188 EVDVWSCGIVLYVMLVGRLPFDD 210
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 108/222 (48%), Gaps = 26/222 (11%)
Query: 277 LAEATNDFSREKELGDGGFGTVYYGK-LKDG-REVAVKRLYDNNYRRVEQFM-----NEV 329
L A + E+G+G +G V+ + LK+G R VA+KR+ + E+ M EV
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRV---RVQTGEEGMPLSTIREV 62
Query: 330 EILTRLR---HKNLVSLFG-CT-SRYSQ--GLLLVYEFVANG--TVADQLHGDRAKHGLL 380
+L L H N+V LF CT SR + L LV+E V T D++ + G+
Sbjct: 63 AVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKV----PEPGVP 118
Query: 381 TWPIRMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHV 440
T I+ ++ + L +LH+ ++HRD+K NIL+ S+ +K+ADFGL+R++ +
Sbjct: 119 TETIK-DMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALT 177
Query: 441 STAPQGTPGYVDPEYHQCYQLTDKSDVYSFGVVLIELISSMP 482
S T Y PE D++S G + E+ P
Sbjct: 178 SVVV--TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKP 217
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 92/205 (44%), Gaps = 11/205 (5%)
Query: 281 TNDFSREKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRV---EQFMNEVEILTRLRH 337
D+ + LG+G +G V + E ++ D R V E E+ I L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLNH 63
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
+N+V +G R L E+ + G + D++ D + P + + +
Sbjct: 64 ENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIG----MPEPDAQRFFHQLMAGVV 118
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPL-DVTHVSTAPQGTPGYVDPEYH 456
YLH I HRD+K N+LLD +K++DFGL+ +F + + GT YV PE
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 178
Query: 457 QCYQL-TDKSDVYSFGVVLIELISS 480
+ + + DV+S G+VL +++
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 92/205 (44%), Gaps = 11/205 (5%)
Query: 281 TNDFSREKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRV---EQFMNEVEILTRLRH 337
D+ + LG+G +G V + E ++ D R V E E+ I L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLNH 63
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
+N+V +G R L E+ + G + D++ D + P + + +
Sbjct: 64 ENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIG----MPEPDAQRFFHQLMAGVV 118
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPL-DVTHVSTAPQGTPGYVDPEYH 456
YLH I HRD+K N+LLD +K++DFGL+ +F + + GT YV PE
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 178
Query: 457 QCYQL-TDKSDVYSFGVVLIELISS 480
+ + + DV+S G+VL +++
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 101/211 (47%), Gaps = 24/211 (11%)
Query: 282 NDFSREKELGDGGFGTVYYG-KLKDGREV----AVKRLYDNNYRRV-EQFMNEVEILTRL 335
+F + K LG G FGTVY G + +G +V A+K L + + ++ ++E ++ +
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 336 RHKNLVSLFG-CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHG---LLTWPIRMNIAIE 391
+ ++ L G C + Q L+ + + G + D + + G LL W ++
Sbjct: 79 DNPHVCRLLGICLTSTVQ---LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQ 129
Query: 392 TASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP--- 448
A + YL ++HRD+ N+L+ + VK+ DFG ++L + P
Sbjct: 130 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 189
Query: 449 GYVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
++ H+ Y T +SDV+S+GV + EL++
Sbjct: 190 MALESILHRIY--THQSDVWSYGVTVWELMT 218
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 101/211 (47%), Gaps = 24/211 (11%)
Query: 282 NDFSREKELGDGGFGTVYYG-KLKDGREV----AVKRLYDNNYRRV-EQFMNEVEILTRL 335
+F + K LG G FGTVY G + +G +V A+ L + + ++ ++E ++ +
Sbjct: 49 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASV 108
Query: 336 RHKNLVSLFG-CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHG---LLTWPIRMNIAIE 391
+ ++ L G C + Q L+ + + G + D + + G LL W ++
Sbjct: 109 DNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQ 159
Query: 392 TASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP--- 448
A + YL ++HRD+ N+L+ + VK+ DFGL++L + P
Sbjct: 160 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 219
Query: 449 GYVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
++ H+ Y T +SDV+S+GV + EL++
Sbjct: 220 MALESILHRIY--THQSDVWSYGVTVWELMT 248
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 92/205 (44%), Gaps = 11/205 (5%)
Query: 281 TNDFSREKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRV---EQFMNEVEILTRLRH 337
D+ + LG+G +G V + E ++ D R V E E+ I L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLNH 63
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
+N+V +G R L E+ + G + D++ D + P + + +
Sbjct: 64 ENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIG----MPEPDAQRFFHQLMAGVV 118
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPL-DVTHVSTAPQGTPGYVDPEYH 456
YLH I HRD+K N+LLD +K++DFGL+ +F + + GT YV PE
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 178
Query: 457 QCYQL-TDKSDVYSFGVVLIELISS 480
+ + + DV+S G+VL +++
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 101/211 (47%), Gaps = 24/211 (11%)
Query: 282 NDFSREKELGDGGFGTVYYG-KLKDGREV----AVKRLYDNNYRRV-EQFMNEVEILTRL 335
+F + K L G FGTVY G + +G +V A+K L + + ++ ++E ++ +
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 336 RHKNLVSLFG-CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHG---LLTWPIRMNIAIE 391
+ ++ L G C + Q L+ + + G + D + + G LL W ++
Sbjct: 82 DNPHVCRLLGICLTSTVQ---LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQ 132
Query: 392 TASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP--- 448
A + YL ++HRD+ N+L+ + VK+ DFGL++L + P
Sbjct: 133 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 192
Query: 449 GYVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
++ H+ Y T +SDV+S+GV + EL++
Sbjct: 193 MALESILHRIY--THQSDVWSYGVTVWELMT 221
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 108/222 (48%), Gaps = 26/222 (11%)
Query: 277 LAEATNDFSREKELGDGGFGTVYYGK-LKDG-REVAVKRLYDNNYRRVEQFM-----NEV 329
L A + E+G+G +G V+ + LK+G R VA+KR+ + E+ M EV
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRV---RVQTGEEGMPLSTIREV 62
Query: 330 EILTRLR---HKNLVSLFG-CT-SRYSQ--GLLLVYEFVANG--TVADQLHGDRAKHGLL 380
+L L H N+V LF CT SR + L LV+E V T D++ + G+
Sbjct: 63 AVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKV----PEPGVP 118
Query: 381 TWPIRMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHV 440
T I+ ++ + L +LH+ ++HRD+K NIL+ S+ +K+ADFGL+R++ +
Sbjct: 119 TETIK-DMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALT 177
Query: 441 STAPQGTPGYVDPEYHQCYQLTDKSDVYSFGVVLIELISSMP 482
S T Y PE D++S G + E+ P
Sbjct: 178 SVVV--TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKP 217
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 101/211 (47%), Gaps = 24/211 (11%)
Query: 282 NDFSREKELGDGGFGTVYYG-KLKDGREV----AVKRLYDNNYRRV-EQFMNEVEILTRL 335
+F + K LG G FGTVY G + +G +V A+K L + + ++ ++E ++ +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 336 RHKNLVSLFG-CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHG---LLTWPIRMNIAIE 391
+ ++ L G C + Q L+ + + G + D + + G LL W ++
Sbjct: 77 DNPHVCRLLGICLTSTVQ---LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQ 127
Query: 392 TASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP--- 448
A + YL ++HRD+ N+L+ + VK+ DFG ++L + P
Sbjct: 128 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 187
Query: 449 GYVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
++ H+ Y T +SDV+S+GV + EL++
Sbjct: 188 MALESILHRIY--THQSDVWSYGVTVWELMT 216
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 101/211 (47%), Gaps = 24/211 (11%)
Query: 282 NDFSREKELGDGGFGTVYYG-KLKDGREV----AVKRLYDNNYRRV-EQFMNEVEILTRL 335
+F + K LG G FGTVY G + +G +V A+K L + + ++ ++E ++ +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 336 RHKNLVSLFG-CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHG---LLTWPIRMNIAIE 391
+ ++ L G C + Q L+ + + G + D + + G LL W ++
Sbjct: 77 DNPHVCRLLGICLTSTVQ---LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQ 127
Query: 392 TASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP--- 448
A + YL ++HRD+ N+L+ + VK+ DFG ++L + P
Sbjct: 128 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 187
Query: 449 GYVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
++ H+ Y T +SDV+S+GV + EL++
Sbjct: 188 MALESILHRIY--THQSDVWSYGVTVWELMT 216
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 93/208 (44%), Gaps = 11/208 (5%)
Query: 278 AEATNDFSREKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRV---EQFMNEVEILTR 334
A D+ + LG+G +G V + E ++ D R V E E+ I
Sbjct: 1 APFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKM 59
Query: 335 LRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETAS 394
L H+N+V +G R L E+ + G + D++ D + P + +
Sbjct: 60 LNHENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIG----MPEPDAQRFFHQLMA 114
Query: 395 ALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPL-DVTHVSTAPQGTPGYVDP 453
+ YLH I HRD+K N+LLD +K++DFGL+ +F + + GT YV P
Sbjct: 115 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 174
Query: 454 EYHQCYQL-TDKSDVYSFGVVLIELISS 480
E + + + DV+S G+VL +++
Sbjct: 175 ELLKRREFHAEPVDVWSCGIVLTAMLAG 202
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 92/205 (44%), Gaps = 11/205 (5%)
Query: 281 TNDFSREKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRV---EQFMNEVEILTRLRH 337
D+ + LG+G +G V + E ++ D R V E E+ I L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLNH 63
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
+N+V +G R L E+ + G + D++ D + P + + +
Sbjct: 64 ENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIG----MPEPDAQRFFHQLMAGVV 118
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPL-DVTHVSTAPQGTPGYVDPEYH 456
YLH I HRD+K N+LLD +K++DFGL+ +F + + GT YV PE
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 457 QCYQL-TDKSDVYSFGVVLIELISS 480
+ + + DV+S G+VL +++
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 92/205 (44%), Gaps = 11/205 (5%)
Query: 281 TNDFSREKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRV---EQFMNEVEILTRLRH 337
D+ + LG+G +G V + E ++ D R V E E+ I L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLNH 64
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
+N+V +G R L E+ + G + D++ D + P + + +
Sbjct: 65 ENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIG----MPEPDAQRFFHQLMAGVV 119
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPL-DVTHVSTAPQGTPGYVDPEYH 456
YLH I HRD+K N+LLD +K++DFGL+ +F + + GT YV PE
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 457 QCYQL-TDKSDVYSFGVVLIELISS 480
+ + + DV+S G+VL +++
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 92/205 (44%), Gaps = 11/205 (5%)
Query: 281 TNDFSREKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRV---EQFMNEVEILTRLRH 337
D+ + LG+G +G V + E ++ D R V E E+ I L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLNH 64
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
+N+V +G R L E+ + G + D++ D + P + + +
Sbjct: 65 ENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIG----MPEPDAQRFFHQLMAGVV 119
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPL-DVTHVSTAPQGTPGYVDPEYH 456
YLH I HRD+K N+LLD +K++DFGL+ +F + + GT YV PE
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 457 QCYQL-TDKSDVYSFGVVLIELISS 480
+ + + DV+S G+VL +++
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 113/252 (44%), Gaps = 41/252 (16%)
Query: 258 TDLETGTVYFGVPIFSYSDLAEATNDFSREKELGDGGFGTV-----------YYGKLKDG 306
DL T +YF + T+D+ +ELG G F V Y K+
Sbjct: 11 VDLGTENLYFQ----XMATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKI--- 63
Query: 307 REVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGL-LLVYEFVANGT 365
+ K+L +++++E+ E I L+H N+V L S +G LV++ V G
Sbjct: 64 --INTKKLSARDHQKLER---EARICRLLKHPNIVRLHDSIS--EEGFHYLVFDLVTGG- 115
Query: 366 VADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDIIHRDVKTNNILLDS---NFCV 422
+L D + + + ++ ++H DI+HRD+K N+LL S V
Sbjct: 116 ---ELFEDIVAREYYSEADASHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAV 172
Query: 423 KVADFGLSRLFPLDVTHVSTAP---QGTPGYVDPEYHQCYQLTDKSDVYSFGVVL-IELI 478
K+ADFGL+ ++V A GTPGY+ PE + D+++ GV+L I L+
Sbjct: 173 KLADFGLA----IEVQGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLV 228
Query: 479 SSMPAVDMNRHR 490
P D ++H+
Sbjct: 229 GYPPFWDEDQHK 240
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 92/205 (44%), Gaps = 11/205 (5%)
Query: 281 TNDFSREKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRV---EQFMNEVEILTRLRH 337
D+ + LG+G +G V + E ++ D R V E E+ I L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLNH 64
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
+N+V +G R L E+ + G + D++ D + P + + +
Sbjct: 65 ENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIG----MPEPDAQRFFHQLMAGVV 119
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPL-DVTHVSTAPQGTPGYVDPEYH 456
YLH I HRD+K N+LLD +K++DFGL+ +F + + GT YV PE
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 457 QCYQL-TDKSDVYSFGVVLIELISS 480
+ + + DV+S G+VL +++
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 92/205 (44%), Gaps = 11/205 (5%)
Query: 281 TNDFSREKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRV---EQFMNEVEILTRLRH 337
D+ + LG+G +G V + E ++ D R V E E+ I L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLNH 64
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
+N+V +G R L E+ + G + D++ D + P + + +
Sbjct: 65 ENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIG----MPEPDAQRFFHQLMAGVV 119
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPL-DVTHVSTAPQGTPGYVDPEYH 456
YLH I HRD+K N+LLD +K++DFGL+ +F + + GT YV PE
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 457 QCYQL-TDKSDVYSFGVVLIELISS 480
+ + + DV+S G+VL +++
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 92/205 (44%), Gaps = 11/205 (5%)
Query: 281 TNDFSREKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRV---EQFMNEVEILTRLRH 337
D+ + LG+G +G V + E ++ D R V E E+ I L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLNH 63
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
+N+V +G R L E+ + G + D++ D + P + + +
Sbjct: 64 ENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIG----MPEPDAQRFFHQLMAGVV 118
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPL-DVTHVSTAPQGTPGYVDPEYH 456
YLH I HRD+K N+LLD +K++DFGL+ +F + + GT YV PE
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 457 QCYQL-TDKSDVYSFGVVLIELISS 480
+ + + DV+S G+VL +++
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 92/205 (44%), Gaps = 11/205 (5%)
Query: 281 TNDFSREKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRV---EQFMNEVEILTRLRH 337
D+ + LG+G +G V + E ++ D R V E E+ I L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLNH 64
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
+N+V +G R L E+ + G + D++ D + P + + +
Sbjct: 65 ENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIG----MPEPDAQRFFHQLMAGVV 119
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPL-DVTHVSTAPQGTPGYVDPEYH 456
YLH I HRD+K N+LLD +K++DFGL+ +F + + GT YV PE
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 457 QCYQL-TDKSDVYSFGVVLIELISS 480
+ + + DV+S G+VL +++
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 92/205 (44%), Gaps = 11/205 (5%)
Query: 281 TNDFSREKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRV---EQFMNEVEILTRLRH 337
D+ + LG+G +G V + E ++ D R V E E+ I L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLNH 63
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
+N+V +G R L E+ + G + D++ D + P + + +
Sbjct: 64 ENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIG----MPEPDAQRFFHQLMAGVV 118
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPL-DVTHVSTAPQGTPGYVDPEYH 456
YLH I HRD+K N+LLD +K++DFGL+ +F + + GT YV PE
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 457 QCYQL-TDKSDVYSFGVVLIELISS 480
+ + + DV+S G+VL +++
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 101/211 (47%), Gaps = 24/211 (11%)
Query: 282 NDFSREKELGDGGFGTVYYG-KLKDGREV----AVKRLYDNNYRRV-EQFMNEVEILTRL 335
+F + K LG G FGTVY G + +G +V A+K L + + ++ ++E ++ +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 336 RHKNLVSLFG-CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHG---LLTWPIRMNIAIE 391
+ ++ L G C + Q L+ + + G + D + + G LL W ++
Sbjct: 77 DNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQ 127
Query: 392 TASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP--- 448
A + YL ++HRD+ N+L+ + VK+ DFG ++L + P
Sbjct: 128 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 187
Query: 449 GYVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
++ H+ Y T +SDV+S+GV + EL++
Sbjct: 188 MALESILHRIY--THQSDVWSYGVTVWELMT 216
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 92/205 (44%), Gaps = 11/205 (5%)
Query: 281 TNDFSREKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRV---EQFMNEVEILTRLRH 337
D+ + LG+G +G V + E ++ D R V E E+ I L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLNH 63
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
+N+V +G R L E+ + G + D++ D + P + + +
Sbjct: 64 ENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIG----MPEPDAQRFFHQLMAGVV 118
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPL-DVTHVSTAPQGTPGYVDPEYH 456
YLH I HRD+K N+LLD +K++DFGL+ +F + + GT YV PE
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 457 QCYQL-TDKSDVYSFGVVLIELISS 480
+ + + DV+S G+VL +++
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 92/205 (44%), Gaps = 11/205 (5%)
Query: 281 TNDFSREKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRV---EQFMNEVEILTRLRH 337
D+ + LG+G +G V + E ++ D R V E E+ I L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLNH 63
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
+N+V +G R L E+ + G + D++ D + P + + +
Sbjct: 64 ENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIG----MPEPDAQRFFHQLMAGVV 118
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPL-DVTHVSTAPQGTPGYVDPEYH 456
YLH I HRD+K N+LLD +K++DFGL+ +F + + GT YV PE
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 457 QCYQL-TDKSDVYSFGVVLIELISS 480
+ + + DV+S G+VL +++
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 101/211 (47%), Gaps = 24/211 (11%)
Query: 282 NDFSREKELGDGGFGTVYYG-KLKDGREV----AVKRLYDNNYRRV-EQFMNEVEILTRL 335
+F + K L G FGTVY G + +G +V A+K L + + ++ ++E ++ +
Sbjct: 15 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 336 RHKNLVSLFG-CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHG---LLTWPIRMNIAIE 391
+ ++ L G C + Q L+ + + G + D + + G LL W ++
Sbjct: 75 DNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQ 125
Query: 392 TASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP--- 448
A + YL ++HRD+ N+L+ + VK+ DFGL++L + P
Sbjct: 126 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 449 GYVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
++ H+ Y T +SDV+S+GV + EL++
Sbjct: 186 MALESILHRIY--THQSDVWSYGVTVWELMT 214
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 92/205 (44%), Gaps = 11/205 (5%)
Query: 281 TNDFSREKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRV---EQFMNEVEILTRLRH 337
D+ + LG+G +G V + E ++ D R V E E+ I L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINAMLNH 64
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
+N+V +G R L E+ + G + D++ D + P + + +
Sbjct: 65 ENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIG----MPEPDAQRFFHQLMAGVV 119
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPL-DVTHVSTAPQGTPGYVDPEYH 456
YLH I HRD+K N+LLD +K++DFGL+ +F + + GT YV PE
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 457 QCYQL-TDKSDVYSFGVVLIELISS 480
+ + + DV+S G+VL +++
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 97/205 (47%), Gaps = 13/205 (6%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKDGREV-AVKRLYDNNYRR---VEQFMNEVEILTRLRH 337
DF+ LG G FG V + K E+ AVK L + + VE M E +L
Sbjct: 20 TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGK 79
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
++ + L V E+V G + + + G P + A E A L
Sbjct: 80 PPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQ----QVGRFKEPHAVFYAAEIAIGLF 135
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQ-GTPGYVDPEYH 456
+L + II+RD+K +N++LDS +K+ADFG+ + D V+T GTP Y+ PE
Sbjct: 136 FLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD--GVTTKXFCGTPDYIAPEI- 192
Query: 457 QCYQLTDKS-DVYSFGVVLIELISS 480
YQ KS D ++FGV+L E+++
Sbjct: 193 IAYQPYGKSVDWWAFGVLLYEMLAG 217
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 101/211 (47%), Gaps = 24/211 (11%)
Query: 282 NDFSREKELGDGGFGTVYYG-KLKDGREV----AVKRLYDNNYRRV-EQFMNEVEILTRL 335
+F + K LG G FGTVY G + +G +V A+K L + + ++ ++E ++ +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 336 RHKNLVSLFG-CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHG---LLTWPIRMNIAIE 391
+ ++ L G C + Q L+ + + G + D + + G LL W ++
Sbjct: 75 DNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQ 125
Query: 392 TASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP--- 448
A + YL ++HRD+ N+L+ + VK+ DFG ++L + P
Sbjct: 126 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 185
Query: 449 GYVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
++ H+ Y T +SDV+S+GV + EL++
Sbjct: 186 MALESILHRIY--THQSDVWSYGVTVWELMT 214
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 95/212 (44%), Gaps = 27/212 (12%)
Query: 283 DFSREKELGDGGFGTVYYGKLKDGREVAVKRLYDN--NYRRVEQ--FMNEVEILTRLRHK 338
DF K +G G FG V KLK+ +V ++ + +R E F E ++L K
Sbjct: 75 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSK 134
Query: 339 NLVSLFGCTSRYSQGLLLVYEFVANGTV-------ADQLHGDRAKHGLLTWPIRMNIAIE 391
+ +L L LV ++ G + D+L + A+ L M IAI+
Sbjct: 135 WITTLHYAFQD-DNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYL----AEMVIAID 189
Query: 392 TASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYV 451
+ L Y +HRD+K +NIL+D N +++ADFG D T S+ GTP Y+
Sbjct: 190 SVHQLHY------VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYI 243
Query: 452 DPEYHQCYQ-----LTDKSDVYSFGVVLIELI 478
PE Q + + D +S GV + E++
Sbjct: 244 SPEILQAMEGGKGRYGPECDWWSLGVCMYEML 275
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 107/217 (49%), Gaps = 24/217 (11%)
Query: 271 IFSYSDLAEATNDFSREKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFM--NE 328
++ Y D+ E ELG G FG V+ K V V + + Y ++++ NE
Sbjct: 49 VYDYYDILE---------ELGSGAFGVVHRCVEKATGRVFVAKFINTPYP-LDKYTVKNE 98
Query: 329 VEILTRLRHKNLVSLFGC-TSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMN 387
+ I+ +L H L++L +Y ++L+ EF++ G + D++ + K ++ +N
Sbjct: 99 ISIMNQLHHPKLINLHDAFEDKYE--MVLILEFLSGGELFDRIAAEDYK---MSEAEVIN 153
Query: 388 IAIETASALAYLHASDIIHRDVKTNNILLDSNFC--VKVADFGLS-RLFPLDVTHVSTAP 444
+ L ++H I+H D+K NI+ ++ VK+ DFGL+ +L P ++ V+TA
Sbjct: 154 YMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTA- 212
Query: 445 QGTPGYVDPEYHQCYQLTDKSDVYSFGVVLIELISSM 481
T + PE + +D+++ GV+ L+S +
Sbjct: 213 --TAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGL 247
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 101/211 (47%), Gaps = 24/211 (11%)
Query: 282 NDFSREKELGDGGFGTVYYG-KLKDGREV----AVKRLYDNNYRRV-EQFMNEVEILTRL 335
+F + K LG G FGTVY G + +G +V A+K L + + ++ ++E ++ +
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 336 RHKNLVSLFG-CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHG---LLTWPIRMNIAIE 391
+ ++ L G C + Q L+ + + G + D + + G LL W ++
Sbjct: 82 DNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQ 132
Query: 392 TASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP--- 448
A + YL ++HRD+ N+L+ + VK+ DFG ++L + P
Sbjct: 133 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 192
Query: 449 GYVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
++ H+ Y T +SDV+S+GV + EL++
Sbjct: 193 MALESILHRIY--THQSDVWSYGVTVWELMT 221
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 101/211 (47%), Gaps = 24/211 (11%)
Query: 282 NDFSREKELGDGGFGTVYYG-KLKDGREV----AVKRLYDNNYRRV-EQFMNEVEILTRL 335
+F + K L G FGTVY G + +G +V A+K L + + ++ ++E ++ +
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 336 RHKNLVSLFG-CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHG---LLTWPIRMNIAIE 391
+ ++ L G C + Q L+ + + G + D + + G LL W ++
Sbjct: 82 DNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQ 132
Query: 392 TASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP--- 448
A + YL ++HRD+ N+L+ + VK+ DFGL++L + P
Sbjct: 133 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 192
Query: 449 GYVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
++ H+ Y T +SDV+S+GV + EL++
Sbjct: 193 MALESILHRIY--THQSDVWSYGVTVWELMT 221
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 11/203 (5%)
Query: 283 DFSREKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRV---EQFMNEVEILTRLRHKN 339
D+ + LG+G +G V + E ++ D R V E E+ I L H+N
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLNHEN 65
Query: 340 LVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYL 399
+V +G R L E+ + G + D++ D + P + + + YL
Sbjct: 66 VVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIG----MPEPDAQRFFHQLMAGVVYL 120
Query: 400 HASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPL-DVTHVSTAPQGTPGYVDPEYHQC 458
H I HRD+K N+LLD +K++DFGL+ +F + + GT YV PE +
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 459 YQL-TDKSDVYSFGVVLIELISS 480
+ + DV+S G+VL +++
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 11/203 (5%)
Query: 283 DFSREKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRV---EQFMNEVEILTRLRHKN 339
D+ + LG+G +G V + E ++ D R V E E+ I L H+N
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLNHEN 66
Query: 340 LVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYL 399
+V +G R L E+ + G + D++ D + P + + + YL
Sbjct: 67 VVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIG----MPEPDAQRFFHQLMAGVVYL 121
Query: 400 HASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPL-DVTHVSTAPQGTPGYVDPEYHQC 458
H I HRD+K N+LLD +K++DFGL+ +F + + GT YV PE +
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 459 YQL-TDKSDVYSFGVVLIELISS 480
+ + DV+S G+VL +++
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAG 204
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 111/225 (49%), Gaps = 25/225 (11%)
Query: 284 FSREKELGDGGFGTV--YYGKLKDGREVAVKRLYDNNYRRV-EQFMNEVEILTRLRHKNL 340
+++ + +G+G +G V Y ++ R VA+K++ ++ ++ + E++IL R RH+N+
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTR-VAIKKISPFEHQTYCQRTLREIQILLRFRHENV 103
Query: 341 VS----LFGCTSRYSQGLLLVYEFVANGTV----ADQLHGDRAKHGLLTWPIRMNIAIET 392
+ L T + + +V + + + QL D + L +
Sbjct: 104 IGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLY----------QI 153
Query: 393 ASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVS--TAPQGTPGY 450
L Y+H+++++HRD+K +N+L+++ +K+ DFGL+R+ + H T T Y
Sbjct: 154 LRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWY 213
Query: 451 VDPEYHQCYQLTDKS-DVYSFGVVLIELISSMPAVDMNRHRHEIN 494
PE + KS D++S G +L E++S+ P + ++N
Sbjct: 214 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 258
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 16/211 (7%)
Query: 270 PIFSYSDLAEATNDFSREKELGDGGFGTVYYG-KLKDGREVAVKRLYDNNYRRVE---QF 325
P S +D A N + K LG+G FG V G++VA+K + + + +
Sbjct: 3 PKSSLADGAHIGN-YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRI 61
Query: 326 MNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIR 385
E+ L LRH +++ L+ + +++V E+ N + D+ ++
Sbjct: 62 EREISYLRLLRHPHIIKLYDVIKSKDE-IIMVIEYAGNELFDYIVQRDK-----MSEQEA 115
Query: 386 MNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQ 445
+ SA+ Y H I+HRD+K N+LLD + VK+ADFGLS + D + T+
Sbjct: 116 RRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT-DGNFLKTSC- 173
Query: 446 GTPGYVDPEY--HQCYQLTDKSDVYSFGVVL 474
G+P Y PE + Y + DV+S GV+L
Sbjct: 174 GSPNYAAPEVISGKLYA-GPEVDVWSCGVIL 203
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 110/253 (43%), Gaps = 25/253 (9%)
Query: 284 FSREKELGDGGFGTVYYGKLKDG--------REVAVKRLYDNNYRRVEQFMNEVEILTRL 335
F + LG GG+G V+ + G +V K + N + E IL +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 336 RHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASA 395
+H +V L + L L+ E+++ G + QL + G+ E + A
Sbjct: 79 KHPFIVDLIYAFQTGGK-LYLILEYLSGGELFMQLE----REGIFMEDTACFYLAEISMA 133
Query: 396 LAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEY 455
L +LH II+RD+K NI+L+ VK+ DFGL + D T V+ GT Y+ PE
Sbjct: 134 LGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT-VTHTFCGTIEYMAPEI 192
Query: 456 HQCYQLTDKSDVYSFGVVLIELISSMPA-VDMNRHRHEINLANLAINKIQKCAFDELIDP 514
D +S G ++ ++++ P NR + I+KI KC + + P
Sbjct: 193 LMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKK--------TIDKILKCKLN--LPP 242
Query: 515 CLGFESDEEVKRM 527
L E+ + +K++
Sbjct: 243 YLTQEARDLLKKL 255
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 16/211 (7%)
Query: 270 PIFSYSDLAEATNDFSREKELGDGGFGTVYYG-KLKDGREVAVKRLYDNNYRRVE---QF 325
P S +D A N + K LG+G FG V G++VA+K + + + +
Sbjct: 2 PKSSLADGAHIGN-YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRI 60
Query: 326 MNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIR 385
E+ L LRH +++ L+ + +++V E+ N + D+ ++
Sbjct: 61 EREISYLRLLRHPHIIKLYDVIKSKDE-IIMVIEYAGNELFDYIVQRDK-----MSEQEA 114
Query: 386 MNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQ 445
+ SA+ Y H I+HRD+K N+LLD + VK+ADFGLS + D + T+
Sbjct: 115 RRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT-DGNFLKTSC- 172
Query: 446 GTPGYVDPEY--HQCYQLTDKSDVYSFGVVL 474
G+P Y PE + Y + DV+S GV+L
Sbjct: 173 GSPNYAAPEVISGKLYA-GPEVDVWSCGVIL 202
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 99/220 (45%), Gaps = 29/220 (13%)
Query: 280 ATNDFSREKELGDGGFGTVYYGK-LKDGREVAVK--RLYDNNYRRVEQFMNEVEILTRLR 336
AT+ + E+G G +GTVY + G VA+K R+ + + EV +L RL
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 337 ---HKNLVSLFG--CTSRYSQGL--LLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIA 389
H N+V L TSR + + LV+E V + + D+A L ++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDL---RTYLDKAPPPGLPAETIKDLM 118
Query: 390 IETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSR-------LFPLDVTHVST 442
+ L +LHA+ I+HRD+K NIL+ S VK+ADFGL+R LFP+ VT
Sbjct: 119 RQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVVTL--- 175
Query: 443 APQGTPGYVDPEYHQCYQLTDKSDVYSFGVVLIELISSMP 482
Y PE D++S G + E+ P
Sbjct: 176 ------WYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKP 209
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 100/214 (46%), Gaps = 17/214 (7%)
Query: 280 ATNDFSREKELGDGGFGTVYYGK-LKDGREVAVK--RLYDNNYRRVEQFMNEVEILTRLR 336
AT+ + E+G G +GTVY + G VA+K R+ + + EV +L RL
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 337 ---HKNLVSLFG--CTSRYSQGL--LLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIA 389
H N+V L TSR + + LV+E V + + D+A L ++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDL---RTYLDKAPPPGLPAETIKDLM 118
Query: 390 IETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAP-QGTP 448
+ L +LHA+ I+HRD+K NIL+ S VK+ADFGL+R++ ++ AP T
Sbjct: 119 RQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALAPVVVTL 175
Query: 449 GYVDPEYHQCYQLTDKSDVYSFGVVLIELISSMP 482
Y PE D++S G + E+ P
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKP 209
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 96/216 (44%), Gaps = 18/216 (8%)
Query: 280 ATNDFSREKELGDGGFGTVYYGK-LKDGREVAVKRLYDNNYRRVEQFM-----NEVEILT 333
AT+ + E+G G +GTVY + G VA+K + N + EV +L
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 334 RLR---HKNLVSLFG--CTSRYSQGL--LLVYEFVANGTVADQLHGDRAKHGLLTWPIRM 386
RL H N+V L TSR + + LV+E V + + D+A L
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDL---RTYLDKAPPPGLPAETIK 123
Query: 387 NIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQG 446
++ + L +LHA+ I+HRD+K NIL+ S VK+ADFGL+R++ +
Sbjct: 124 DLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVV--V 181
Query: 447 TPGYVDPEYHQCYQLTDKSDVYSFGVVLIELISSMP 482
T Y PE D++S G + E+ P
Sbjct: 182 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKP 217
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 107/234 (45%), Gaps = 27/234 (11%)
Query: 258 TDLETGTVYFGVPIFSYSDLAEATNDFSREKELGDGGFGTVYYGKLKD-GREVAVK---- 312
DL T +YF + + ++ E ELG G F V + K G+E A K
Sbjct: 11 VDLGTENLYFQSMVEDHYEMGE---------ELGSGQFAIVRKCRQKGTGKEYAAKFIKK 61
Query: 313 RLYDNNYRRV--EQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQL 370
R ++ R V E+ EV IL +RH N+++L + ++L+ E V+ G + D L
Sbjct: 62 RRLXSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTD-VVLILELVSGGELFDFL 120
Query: 371 HGDRAKHGLLTWPIRMNIAIETASALAYLHASDIIHRDVKTNNI-LLDSNF---CVKVAD 426
A+ LT + + YLH+ I H D+K NI LLD N +K+ D
Sbjct: 121 ----AEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLID 176
Query: 427 FGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQLTDKSDVYSFGVVLIELISS 480
FG++ ++ + GTP +V PE L ++D++S GV+ L+S
Sbjct: 177 FGIAH--KIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 228
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 104/221 (47%), Gaps = 21/221 (9%)
Query: 281 TNDFSREKELGDGGFGTVYY-GKLKDGREVAVK-----RLYDNNYRRVEQFMNEVEILTR 334
T+++ +ELG G F V K+ G+E A K +L +++++E+ E I
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLER---EARICRL 59
Query: 335 LRHKNLVSLFGCTSRYSQGL-LLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETA 393
L+H N+V L S +G LV++ V G +L D + + +
Sbjct: 60 LKHPNIVRLHDSIS--EEGFHYLVFDLVTGG----ELFEDIVAREYYSEADASHCIQQIL 113
Query: 394 SALAYLHASDIIHRDVKTNNILLDS---NFCVKVADFGLSRLFPLDVTHVSTAPQGTPGY 450
++ + H + I+HRD+K N+LL S VK+ADFGL+ D GTPGY
Sbjct: 114 ESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGD-QQAWFGFAGTPGY 172
Query: 451 VDPEYHQCYQLTDKSDVYSFGVVL-IELISSMPAVDMNRHR 490
+ PE + D+++ GV+L I L+ P D ++HR
Sbjct: 173 LSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHR 213
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 110/253 (43%), Gaps = 25/253 (9%)
Query: 284 FSREKELGDGGFGTVYYGKLKDG--------REVAVKRLYDNNYRRVEQFMNEVEILTRL 335
F + LG GG+G V+ + G +V K + N + E IL +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 336 RHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASA 395
+H +V L + L L+ E+++ G + QL + G+ E + A
Sbjct: 79 KHPFIVDLIYAFQTGGK-LYLILEYLSGGELFMQLE----REGIFMEDTACFYLAEISMA 133
Query: 396 LAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEY 455
L +LH II+RD+K NI+L+ VK+ DFGL + D T V+ GT Y+ PE
Sbjct: 134 LGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT-VTHXFCGTIEYMAPEI 192
Query: 456 HQCYQLTDKSDVYSFGVVLIELISSMPA-VDMNRHRHEINLANLAINKIQKCAFDELIDP 514
D +S G ++ ++++ P NR + I+KI KC + + P
Sbjct: 193 LMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKK--------TIDKILKCKLN--LPP 242
Query: 515 CLGFESDEEVKRM 527
L E+ + +K++
Sbjct: 243 YLTQEARDLLKKL 255
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 111/236 (47%), Gaps = 35/236 (14%)
Query: 282 NDFSREKELGDGGFGTVYYG-KLKDGREVAVKRLYDNNY-----RRVEQFMN---EVEIL 332
+++ K LG G G V + K ++VA+K + + R + +N E+EIL
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 333 TRLRHKNLVSL---FGCTSRYSQGLLLVYEFVANGTVADQLHGD-RAKHGLLT-WPIRMN 387
+L H ++ + F Y +V E + G + D++ G+ R K + +M
Sbjct: 70 KKLNHPCIIKIKNFFDAEDYY-----IVLELMEGGELFDKVVGNKRLKEATCKLYFYQML 124
Query: 388 IAIETASALAYLHASDIIHRDVKTNNILLDS---NFCVKVADFGLSRLFPLDVTHVSTAP 444
+A++ YLH + IIHRD+K N+LL S + +K+ DFG S++ L T +
Sbjct: 125 LAVQ------YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRTL 176
Query: 445 QGTPGYVDPEYHQCYQLTDKS---DVYSFGVVLIELISSMPAVDMNRHRHEINLAN 497
GTP Y+ PE + D +S GV+L +S P + HR +++L +
Sbjct: 177 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP--FSEHRTQVSLKD 230
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 111/236 (47%), Gaps = 35/236 (14%)
Query: 282 NDFSREKELGDGGFGTVYYG-KLKDGREVAVKRLYDNNY-----RRVEQFMN---EVEIL 332
+++ K LG G G V + K ++VA+K + + R + +N E+EIL
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 333 TRLRHKNLVSL---FGCTSRYSQGLLLVYEFVANGTVADQLHGD-RAKHGLLT-WPIRMN 387
+L H ++ + F Y +V E + G + D++ G+ R K + +M
Sbjct: 70 KKLNHPCIIKIKNFFDAEDYY-----IVLELMEGGELFDKVVGNKRLKEATCKLYFYQML 124
Query: 388 IAIETASALAYLHASDIIHRDVKTNNILLDS---NFCVKVADFGLSRLFPLDVTHVSTAP 444
+A++ YLH + IIHRD+K N+LL S + +K+ DFG S++ L T +
Sbjct: 125 LAVQ------YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRTL 176
Query: 445 QGTPGYVDPEYHQCYQLTDKS---DVYSFGVVLIELISSMPAVDMNRHRHEINLAN 497
GTP Y+ PE + D +S GV+L +S P + HR +++L +
Sbjct: 177 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP--FSEHRTQVSLKD 230
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 111/236 (47%), Gaps = 35/236 (14%)
Query: 282 NDFSREKELGDGGFGTVYYG-KLKDGREVAVKRLYDNNY-----RRVEQFMN---EVEIL 332
+++ K LG G G V + K ++VA+K + + R + +N E+EIL
Sbjct: 9 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 68
Query: 333 TRLRHKNLVSL---FGCTSRYSQGLLLVYEFVANGTVADQLHGD-RAKHGLLT-WPIRMN 387
+L H ++ + F Y +V E + G + D++ G+ R K + +M
Sbjct: 69 KKLNHPCIIKIKNFFDAEDYY-----IVLELMEGGELFDKVVGNKRLKEATCKLYFYQML 123
Query: 388 IAIETASALAYLHASDIIHRDVKTNNILLDS---NFCVKVADFGLSRLFPLDVTHVSTAP 444
+A++ YLH + IIHRD+K N+LL S + +K+ DFG S++ L T +
Sbjct: 124 LAVQ------YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRTL 175
Query: 445 QGTPGYVDPEYHQCYQLTDKS---DVYSFGVVLIELISSMPAVDMNRHRHEINLAN 497
GTP Y+ PE + D +S GV+L +S P + HR +++L +
Sbjct: 176 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP--FSEHRTQVSLKD 229
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 104/221 (47%), Gaps = 21/221 (9%)
Query: 281 TNDFSREKELGDGGFGTVYY-GKLKDGREVAVK-----RLYDNNYRRVEQFMNEVEILTR 334
T+++ +ELG G F V K+ G+E A K +L +++++E+ E I
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLER---EARICRL 59
Query: 335 LRHKNLVSLFGCTSRYSQGL-LLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETA 393
L+H N+V L S +G LV++ V G +L D + + +
Sbjct: 60 LKHPNIVRLHDSIS--EEGFHYLVFDLVTGG----ELFEDIVAREYYSEADASHCIQQIL 113
Query: 394 SALAYLHASDIIHRDVKTNNILLDS---NFCVKVADFGLSRLFPLDVTHVSTAPQGTPGY 450
++ + H + I+HRD+K N+LL S VK+ADFGL+ D GTPGY
Sbjct: 114 ESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGD-QQAWFGFAGTPGY 172
Query: 451 VDPEYHQCYQLTDKSDVYSFGVVL-IELISSMPAVDMNRHR 490
+ PE + D+++ GV+L I L+ P D ++HR
Sbjct: 173 LSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHR 213
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 111/236 (47%), Gaps = 35/236 (14%)
Query: 282 NDFSREKELGDGGFGTVYYG-KLKDGREVAVKRLYDNNY-----RRVEQFMN---EVEIL 332
+++ K LG G G V + K ++VA+K + + R + +N E+EIL
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 333 TRLRHKNLVSL---FGCTSRYSQGLLLVYEFVANGTVADQLHGD-RAKHGLLT-WPIRMN 387
+L H ++ + F Y +V E + G + D++ G+ R K + +M
Sbjct: 70 KKLNHPCIIKIKNFFDAEDYY-----IVLELMEGGELFDKVVGNKRLKEATCKLYFYQML 124
Query: 388 IAIETASALAYLHASDIIHRDVKTNNILLDS---NFCVKVADFGLSRLFPLDVTHVSTAP 444
+A++ YLH + IIHRD+K N+LL S + +K+ DFG S++ L T +
Sbjct: 125 LAVQ------YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRTL 176
Query: 445 QGTPGYVDPEYHQCYQLTDKS---DVYSFGVVLIELISSMPAVDMNRHRHEINLAN 497
GTP Y+ PE + D +S GV+L +S P + HR +++L +
Sbjct: 177 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP--FSEHRTQVSLKD 230
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 90/200 (45%), Gaps = 16/200 (8%)
Query: 290 LGDGGFGTVYYGKLKDGREVAVKRLY---------DNNYRRVEQFMNEVEILTRLRHKNL 340
LG GGFG V+ ++K A +LY + + M E +IL ++ + +
Sbjct: 193 LGRGGFGEVFACQMK-----ATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFI 247
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
VSL L LV + G + ++ + P + + S L +LH
Sbjct: 248 VSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH 306
Query: 401 ASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQ 460
+II+RD+K N+LLD + V+++D GL+ T + GTPG++ PE +
Sbjct: 307 QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMAPELLLGEE 365
Query: 461 LTDKSDVYSFGVVLIELISS 480
D ++ GV L E+I++
Sbjct: 366 YDFSVDYFALGVTLYEMIAA 385
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 111/236 (47%), Gaps = 35/236 (14%)
Query: 282 NDFSREKELGDGGFGTVYYG-KLKDGREVAVKRLYDNNY-----RRVEQFMN---EVEIL 332
+++ K LG G G V + K ++VA+K + + R + +N E+EIL
Sbjct: 16 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 75
Query: 333 TRLRHKNLVSL---FGCTSRYSQGLLLVYEFVANGTVADQLHGD-RAKHGLLT-WPIRMN 387
+L H ++ + F Y +V E + G + D++ G+ R K + +M
Sbjct: 76 KKLNHPCIIKIKNFFDAEDYY-----IVLELMEGGELFDKVVGNKRLKEATCKLYFYQML 130
Query: 388 IAIETASALAYLHASDIIHRDVKTNNILLDS---NFCVKVADFGLSRLFPLDVTHVSTAP 444
+A++ YLH + IIHRD+K N+LL S + +K+ DFG S++ L T +
Sbjct: 131 LAVQ------YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRTL 182
Query: 445 QGTPGYVDPEYHQCYQLTDKS---DVYSFGVVLIELISSMPAVDMNRHRHEINLAN 497
GTP Y+ PE + D +S GV+L +S P + HR +++L +
Sbjct: 183 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP--FSEHRTQVSLKD 236
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 94/203 (46%), Gaps = 19/203 (9%)
Query: 288 KELGDGGFGTVYYGKLKDGREVAVK--RLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFG 345
+++G+G +G VY + G A+K RL + + E+ IL L+H N+V L+
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 346 CTSRYSQGLLLVYEFVANGTVADQLHGDRAK-----HGLLTWPIRMNIAIETASALAYLH 400
+ L+LV+E L D K G L + ++ + +AY H
Sbjct: 68 VIHT-KKRLVLVFE---------HLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH 117
Query: 401 ASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPE-YHQCY 459
++HRD+K N+L++ +K+ADFGL+R F + V T T Y P+
Sbjct: 118 DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY-THEVVTLWYRAPDVLMGSK 176
Query: 460 QLTDKSDVYSFGVVLIELISSMP 482
+ + D++S G + E+++ P
Sbjct: 177 KYSTTIDIWSVGCIFAEMVNGAP 199
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 91/205 (44%), Gaps = 11/205 (5%)
Query: 281 TNDFSREKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRV---EQFMNEVEILTRLRH 337
D+ + LG+G G V + E ++ D R V E E+ I L H
Sbjct: 5 VEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLNH 63
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
+N+V +G R L E+ + G + D++ D + P + + +
Sbjct: 64 ENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIG----MPEPDAQRFFHQLMAGVV 118
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPL-DVTHVSTAPQGTPGYVDPEYH 456
YLH I HRD+K N+LLD +K++DFGL+ +F + + GT YV PE
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 457 QCYQL-TDKSDVYSFGVVLIELISS 480
+ + + DV+S G+VL +++
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 94/203 (46%), Gaps = 19/203 (9%)
Query: 288 KELGDGGFGTVYYGKLKDGREVAVK--RLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFG 345
+++G+G +G VY + G A+K RL + + E+ IL L+H N+V L+
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 346 CTSRYSQGLLLVYEFVANGTVADQLHGDRAK-----HGLLTWPIRMNIAIETASALAYLH 400
+ L+LV+E L D K G L + ++ + +AY H
Sbjct: 68 VIHT-KKRLVLVFE---------HLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH 117
Query: 401 ASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPE-YHQCY 459
++HRD+K N+L++ +K+ADFGL+R F + V T T Y P+
Sbjct: 118 DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY-THEVVTLWYRAPDVLMGSK 176
Query: 460 QLTDKSDVYSFGVVLIELISSMP 482
+ + D++S G + E+++ P
Sbjct: 177 KYSTTIDIWSVGCIFAEMVNGTP 199
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 90/200 (45%), Gaps = 16/200 (8%)
Query: 290 LGDGGFGTVYYGKLKDGREVAVKRLY---------DNNYRRVEQFMNEVEILTRLRHKNL 340
LG GGFG V+ ++K A +LY + + M E +IL ++ + +
Sbjct: 193 LGRGGFGEVFACQMK-----ATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFI 247
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
VSL L LV + G + ++ + P + + S L +LH
Sbjct: 248 VSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH 306
Query: 401 ASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQ 460
+II+RD+K N+LLD + V+++D GL+ T + GTPG++ PE +
Sbjct: 307 QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMAPELLLGEE 365
Query: 461 LTDKSDVYSFGVVLIELISS 480
D ++ GV L E+I++
Sbjct: 366 YDFSVDYFALGVTLYEMIAA 385
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 90/200 (45%), Gaps = 16/200 (8%)
Query: 290 LGDGGFGTVYYGKLKDGREVAVKRLY---------DNNYRRVEQFMNEVEILTRLRHKNL 340
LG GGFG V+ ++K A +LY + + M E +IL ++ + +
Sbjct: 193 LGRGGFGEVFACQMK-----ATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFI 247
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
VSL L LV + G + ++ + P + + S L +LH
Sbjct: 248 VSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH 306
Query: 401 ASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQ 460
+II+RD+K N+LLD + V+++D GL+ T + GTPG++ PE +
Sbjct: 307 QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMAPELLLGEE 365
Query: 461 LTDKSDVYSFGVVLIELISS 480
D ++ GV L E+I++
Sbjct: 366 YDFSVDYFALGVTLYEMIAA 385
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 90/200 (45%), Gaps = 16/200 (8%)
Query: 290 LGDGGFGTVYYGKLKDGREVAVKRLY---------DNNYRRVEQFMNEVEILTRLRHKNL 340
LG GGFG V+ ++K A +LY + + M E +IL ++ + +
Sbjct: 193 LGRGGFGEVFACQMK-----ATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFI 247
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
VSL L LV + G + ++ + P + + S L +LH
Sbjct: 248 VSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH 306
Query: 401 ASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQ 460
+II+RD+K N+LLD + V+++D GL+ T + GTPG++ PE +
Sbjct: 307 QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMAPELLLGEE 365
Query: 461 LTDKSDVYSFGVVLIELISS 480
D ++ GV L E+I++
Sbjct: 366 YDFSVDYFALGVTLYEMIAA 385
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 94/203 (46%), Gaps = 19/203 (9%)
Query: 288 KELGDGGFGTVYYGKLKDGREVAVK--RLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFG 345
+++G+G +G VY + G A+K RL + + E+ IL L+H N+V L+
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 346 CTSRYSQGLLLVYEFVANGTVADQLHGDRAK-----HGLLTWPIRMNIAIETASALAYLH 400
+ L+LV+E L D K G L + ++ + +AY H
Sbjct: 68 VIHT-KKRLVLVFE---------HLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH 117
Query: 401 ASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPE-YHQCY 459
++HRD+K N+L++ +K+ADFGL+R F + V T T Y P+
Sbjct: 118 DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY-THEIVTLWYRAPDVLMGSK 176
Query: 460 QLTDKSDVYSFGVVLIELISSMP 482
+ + D++S G + E+++ P
Sbjct: 177 KYSTTIDIWSVGCIFAEMVNGTP 199
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 107/229 (46%), Gaps = 27/229 (11%)
Query: 290 LGDGGFGTVYYGKLK-DGREVAVKRLYD-----NNYRRVEQFMNEVEILTRLRHKNLVSL 343
+G+G +G V + + G++VA+K++ + N +R + E++IL +H N++++
Sbjct: 63 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRT---LRELKILKHFKHDNIIAI 119
Query: 344 ---FGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMN----IAIETASAL 396
T Y EF + V D + D + + P+ + + L
Sbjct: 120 KDILRPTVPYG-------EFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGL 172
Query: 397 AYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLF---PLDVTHVSTAPQGTPGYVDP 453
Y+H++ +IHRD+K +N+L++ N +K+ DFG++R P + + T T Y P
Sbjct: 173 KYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAP 232
Query: 454 EYH-QCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHRHEINLANLAIN 501
E ++ T D++S G + E+++ + H++ L + +
Sbjct: 233 ELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLG 281
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 104/216 (48%), Gaps = 19/216 (8%)
Query: 290 LGDGGFGTV--YYGKLKDGREVAVKRLYDNNYRRVEQ-FMNEVEILTRLRHKNLVSLFGC 346
+G+G +G V Y L R VA+K++ ++ Q + E++IL R RH+N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVR-VAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDI 93
Query: 347 TSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAI-----ETASALAYLHA 401
+ + + V D + D K LL N I + L Y+H+
Sbjct: 94 IRAPT-----IEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIHS 146
Query: 402 SDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVS--TAPQGTPGYVDPEYHQCY 459
++++HRD+K +N+LL++ +K+ DFGL+R+ D H T T Y PE
Sbjct: 147 ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 460 QLTDKS-DVYSFGVVLIELISSMPAVDMNRHRHEIN 494
+ KS D++S G +L E++S+ P + ++N
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 242
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 93/193 (48%), Gaps = 15/193 (7%)
Query: 288 KELGDGGFGTVYYG-KLKDGREVAVKRLYDNNYRRVE---QFMNEVEILTRLRHKNLVSL 343
K LG+G FG V G++VA+K + + + + E+ L LRH +++ L
Sbjct: 10 KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 69
Query: 344 FGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASD 403
+ + +++V E+ N + D+ ++ + SA+ Y H
Sbjct: 70 YDVIKSKDE-IIMVIEYAGNELFDYIVQRDK-----MSEQEARRFFQQIISAVEYCHRHK 123
Query: 404 IIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEY--HQCYQL 461
I+HRD+K N+LLD + VK+ADFGLS + D + T+ G+P Y PE + Y
Sbjct: 124 IVHRDLKPENLLLDEHLNVKIADFGLSNIMT-DGNFLKTS-CGSPNYAAPEVISGKLYA- 180
Query: 462 TDKSDVYSFGVVL 474
+ DV+S GV+L
Sbjct: 181 GPEVDVWSCGVIL 193
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 99/217 (45%), Gaps = 23/217 (10%)
Query: 280 ATNDFSREKELGDGGFGTVYYGK-LKDGREVAVK--RLYDNNYRRVEQFMNEVEILTRLR 336
AT+ + E+G G +GTVY + G VA+K R+ + + EV +L RL
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 337 ---HKNLVSLFG--CTSRYSQGL--LLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIA 389
H N+V L TSR + + LV+E V + + D+A L ++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDL---RTYLDKAPPPGLPAETIKDLM 118
Query: 390 IETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLF----PLDVTHVSTAPQ 445
+ L +LHA+ I+HRD+K NIL+ S VK+ADFGL+R++ LD V
Sbjct: 119 RQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVV----- 173
Query: 446 GTPGYVDPEYHQCYQLTDKSDVYSFGVVLIELISSMP 482
T Y PE D++S G + E+ P
Sbjct: 174 -TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKP 209
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 93/193 (48%), Gaps = 15/193 (7%)
Query: 288 KELGDGGFGTVYYG-KLKDGREVAVKRLYDNNYRRVE---QFMNEVEILTRLRHKNLVSL 343
K LG+G FG V G++VA+K + + + + E+ L LRH +++ L
Sbjct: 14 KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 73
Query: 344 FGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASD 403
+ + +++V E+ N + D+ ++ + SA+ Y H
Sbjct: 74 YDVIKSKDE-IIMVIEYAGNELFDYIVQRDK-----MSEQEARRFFQQIISAVEYCHRHK 127
Query: 404 IIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEY--HQCYQL 461
I+HRD+K N+LLD + VK+ADFGLS + D + T+ G+P Y PE + Y
Sbjct: 128 IVHRDLKPENLLLDEHLNVKIADFGLSNIMT-DGNFLKTS-CGSPNYAAPEVISGKLYA- 184
Query: 462 TDKSDVYSFGVVL 474
+ DV+S GV+L
Sbjct: 185 GPEVDVWSCGVIL 197
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 105/216 (48%), Gaps = 19/216 (8%)
Query: 290 LGDGGFGTV--YYGKLKDGREVAVKRLYDNNYRRV-EQFMNEVEILTRLRHKNLVSLFGC 346
+G+G +G V Y L R VA+K++ ++ ++ + E++IL R RH+N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVR-VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 93
Query: 347 TSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAI-----ETASALAYLHA 401
+ + + V D + D K LL N I + L Y+H+
Sbjct: 94 IRAPT-----IEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIHS 146
Query: 402 SDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVS--TAPQGTPGYVDPEYHQCY 459
++++HRD+K +N+LL++ +K+ DFGL+R+ D H T T Y PE
Sbjct: 147 ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 460 QLTDKS-DVYSFGVVLIELISSMPAVDMNRHRHEIN 494
+ KS D++S G +L E++S+ P + ++N
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 242
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 104/211 (49%), Gaps = 9/211 (4%)
Query: 290 LGDGGFGTV--YYGKLKDGREVAVKRLYDNNYRRV-EQFMNEVEILTRLRHKNLVSLFGC 346
+G+G +G V Y + R VA+K++ ++ ++ + E++IL R RH+N++ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVR-VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 109
Query: 347 TSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDIIH 406
+ + V + AD + +H L+ + L Y+H+++++H
Sbjct: 110 IRAPTIEQMKDVYLVTHLMGADLYKLLKTQH--LSNDHICYFLYQILRGLKYIHSANVLH 167
Query: 407 RDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVS--TAPQGTPGYVDPEYHQCYQLTDK 464
RD+K +N+LL++ +K+ DFGL+R+ D H T T Y PE + K
Sbjct: 168 RDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 227
Query: 465 S-DVYSFGVVLIELISSMPAVDMNRHRHEIN 494
S D++S G +L E++S+ P + ++N
Sbjct: 228 SIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 258
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 118/254 (46%), Gaps = 36/254 (14%)
Query: 265 VYFGVPIFSYSDLAEATND-FSREKELGDGGFGTVYYG-KLKDGREVAVKRLYDNNY--- 319
V+F + + S +A D + K LG G G V + K ++VA++ + +
Sbjct: 117 VFFDLTVDDQSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIG 176
Query: 320 --RRVEQFMN---EVEILTRLRHKNLVSL---FGCTSRYSQGLLLVYEFVANGTVADQLH 371
R + +N E+EIL +L H ++ + F Y +V E + G + D++
Sbjct: 177 SAREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDYY-----IVLELMEGGELFDKVV 231
Query: 372 GD-RAKHGLLT-WPIRMNIAIETASALAYLHASDIIHRDVKTNNILLDS---NFCVKVAD 426
G+ R K + +M +A++ YLH + IIHRD+K N+LL S + +K+ D
Sbjct: 232 GNKRLKEATCKLYFYQMLLAVQ------YLHENGIIHRDLKPENVLLSSQEEDCLIKITD 285
Query: 427 FGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQLTDKS---DVYSFGVVLIELISSMPA 483
FG S++ L T + GTP Y+ PE + D +S GV+L +S P
Sbjct: 286 FGHSKI--LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 343
Query: 484 VDMNRHRHEINLAN 497
+ HR +++L +
Sbjct: 344 --FSEHRTQVSLKD 355
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 62/124 (50%), Gaps = 12/124 (9%)
Query: 386 MNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGL-----------SRLFP 434
++I I+ A A+ +LH+ ++HRD+K +NI + VKV DFGL + L P
Sbjct: 167 LHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTP 226
Query: 435 LDVTHVSTAPQGTPGYVDPEYHQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHRHEIN 494
+ GT Y+ PE + K D++S G++L EL+ S + M R R +
Sbjct: 227 MPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSF-STQMERVRIITD 285
Query: 495 LANL 498
+ NL
Sbjct: 286 VRNL 289
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Query: 282 NDFSREKELGDGGFGTVYYGKLK-DGREVAVKRL-YDNNYRRVEQFMNEVEILTRLRHKN 339
DF + +G GGFG V+ K K D A+KR+ N E+ M EV+ L +L H
Sbjct: 6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 65
Query: 340 LVSLFGC 346
+V F
Sbjct: 66 IVRYFNA 72
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 108/229 (47%), Gaps = 27/229 (11%)
Query: 290 LGDGGFGTVYYGKLK-DGREVAVKRL---YD--NNYRRVEQFMNEVEILTRLRHKNLVSL 343
+G+G +G V + + G++VA+K++ +D N +R + E++IL +H N++++
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRT---LRELKILKHFKHDNIIAI 118
Query: 344 ---FGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMN----IAIETASAL 396
T Y EF + V D + D + + P+ + + L
Sbjct: 119 KDILRPTVPYG-------EFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGL 171
Query: 397 AYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLF---PLDVTHVSTAPQGTPGYVDP 453
Y+H++ +IHRD+K +N+L++ N +K+ DFG++R P + + T T Y P
Sbjct: 172 KYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAP 231
Query: 454 EYH-QCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHRHEINLANLAIN 501
E ++ T D++S G + E+++ + H++ L + +
Sbjct: 232 ELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLG 280
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 107/266 (40%), Gaps = 51/266 (19%)
Query: 272 FSYSDLAEATNDFSREKELGDGGFGTVYYGKLKDGREV-AVKRLYDNNYRR-----VEQF 325
F L E + + +G G +G V R + A+K + N R+ VE+
Sbjct: 16 FQGGSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERI 75
Query: 326 MNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQL--------------- 370
EV ++ +L H N+ L+ Q + LV E G + D+L
Sbjct: 76 KTEVRLMKKLHHPNIARLYEVYED-EQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDV 134
Query: 371 --------------------HGDRAKHGLLTW-PIRMNIAIETASALAYLHASDIIHRDV 409
HG R + + NI + SAL YLH I HRD+
Sbjct: 135 VKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDI 194
Query: 410 KTNNILLDSN--FCVKVADFGLSR-LFPLD--VTHVSTAPQGTPGYVDPEYHQCYQLT-- 462
K N L +N F +K+ DFGLS+ + L+ + T GTP +V PE +
Sbjct: 195 KPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYG 254
Query: 463 DKSDVYSFGVVL-IELISSMPAVDMN 487
K D +S GV+L + L+ ++P +N
Sbjct: 255 PKCDAWSAGVLLHLLLMGAVPFPGVN 280
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 118/254 (46%), Gaps = 36/254 (14%)
Query: 265 VYFGVPIFSYSDLAEATND-FSREKELGDGGFGTVYYG-KLKDGREVAVKRLYDNNY--- 319
V+F + + S +A D + K LG G G V + K ++VA++ + +
Sbjct: 131 VFFDLTVDDQSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIG 190
Query: 320 --RRVEQFMN---EVEILTRLRHKNLVSL---FGCTSRYSQGLLLVYEFVANGTVADQLH 371
R + +N E+EIL +L H ++ + F Y +V E + G + D++
Sbjct: 191 SAREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDYY-----IVLELMEGGELFDKVV 245
Query: 372 GD-RAKHGLLT-WPIRMNIAIETASALAYLHASDIIHRDVKTNNILLDS---NFCVKVAD 426
G+ R K + +M +A++ YLH + IIHRD+K N+LL S + +K+ D
Sbjct: 246 GNKRLKEATCKLYFYQMLLAVQ------YLHENGIIHRDLKPENVLLSSQEEDCLIKITD 299
Query: 427 FGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQLTDKS---DVYSFGVVLIELISSMPA 483
FG S++ L T + GTP Y+ PE + D +S GV+L +S P
Sbjct: 300 FGHSKI--LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 357
Query: 484 VDMNRHRHEINLAN 497
+ HR +++L +
Sbjct: 358 --FSEHRTQVSLKD 369
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 104/224 (46%), Gaps = 21/224 (9%)
Query: 268 GVPIFSYSDLAEATNDFSREKELGDGGFGTVYYGKLKD-GREVAVK----RLYDNNYRRV 322
G+ F D+ + + +ELG G F V + K G+E A K R ++ R V
Sbjct: 1 GMSTFRQEDVE---DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGV 57
Query: 323 --EQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLL 380
E+ EV IL +RH N+++L + ++L+ E V+ G + D L A+ L
Sbjct: 58 SREEIEREVNILREIRHPNIITLHDIFENKTD-VVLILELVSGGELFDFL----AEKESL 112
Query: 381 TWPIRMNIAIETASALAYLHASDIIHRDVKTNNI-LLDSNF---CVKVADFGLSRLFPLD 436
T + + YLH+ I H D+K NI LLD N +K+ DFG++ ++
Sbjct: 113 TEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH--KIE 170
Query: 437 VTHVSTAPQGTPGYVDPEYHQCYQLTDKSDVYSFGVVLIELISS 480
+ GTP +V PE L ++D++S GV+ L+S
Sbjct: 171 AGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 105/216 (48%), Gaps = 19/216 (8%)
Query: 290 LGDGGFGTV--YYGKLKDGREVAVKRLYDNNYRRV-EQFMNEVEILTRLRHKNLVSLFGC 346
+G+G +G V Y L R VA+K++ ++ ++ + E++IL R RH+N++ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVR-VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 87
Query: 347 TSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAI-----ETASALAYLHA 401
+ + + V D + D K LL N I + L Y+H+
Sbjct: 88 IRAPT-----IEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIHS 140
Query: 402 SDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVS--TAPQGTPGYVDPEYHQCY 459
++++HRD+K +N+LL++ +K+ DFGL+R+ D H T T Y PE
Sbjct: 141 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 200
Query: 460 QLTDKS-DVYSFGVVLIELISSMPAVDMNRHRHEIN 494
+ KS D++S G +L E++S+ P + ++N
Sbjct: 201 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 236
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 105/216 (48%), Gaps = 19/216 (8%)
Query: 290 LGDGGFGTV--YYGKLKDGREVAVKRLYDNNYRRV-EQFMNEVEILTRLRHKNLVSLFGC 346
+G+G +G V Y L R VA+K++ ++ ++ + E++IL R RH+N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVR-VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 93
Query: 347 TSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAI-----ETASALAYLHA 401
+ + + V D + D K LL N I + L Y+H+
Sbjct: 94 IRAPT-----IEQMKDVYIVQDLMETDLYK--LLKCQHLSNDHICYFLYQILRGLKYIHS 146
Query: 402 SDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVS--TAPQGTPGYVDPEYHQCY 459
++++HRD+K +N+LL++ +K+ DFGL+R+ D H T T Y PE
Sbjct: 147 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 460 QLTDKS-DVYSFGVVLIELISSMPAVDMNRHRHEIN 494
+ KS D++S G +L E++S+ P + ++N
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 242
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 105/216 (48%), Gaps = 19/216 (8%)
Query: 290 LGDGGFGTV--YYGKLKDGREVAVKRLYDNNYRRV-EQFMNEVEILTRLRHKNLVSLFGC 346
+G+G +G V Y L R VA+K++ ++ ++ + E++IL R RH+N++ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVR-VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 94
Query: 347 TSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAI-----ETASALAYLHA 401
+ + + V D + D K LL N I + L Y+H+
Sbjct: 95 IRAPT-----IEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIHS 147
Query: 402 SDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVS--TAPQGTPGYVDPEYHQCY 459
++++HRD+K +N+LL++ +K+ DFGL+R+ D H T T Y PE
Sbjct: 148 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 207
Query: 460 QLTDKS-DVYSFGVVLIELISSMPAVDMNRHRHEIN 494
+ KS D++S G +L E++S+ P + ++N
Sbjct: 208 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 243
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 105/216 (48%), Gaps = 19/216 (8%)
Query: 290 LGDGGFGTV--YYGKLKDGREVAVKRLYDNNYRRV-EQFMNEVEILTRLRHKNLVSLFGC 346
+G+G +G V Y L R VA+K++ ++ ++ + E++IL R RH+N++ +
Sbjct: 37 IGEGAYGMVCSAYDNLNKVR-VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 95
Query: 347 TSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAI-----ETASALAYLHA 401
+ + + V D + D K LL N I + L Y+H+
Sbjct: 96 IRAPT-----IEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIHS 148
Query: 402 SDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVS--TAPQGTPGYVDPEYHQCY 459
++++HRD+K +N+LL++ +K+ DFGL+R+ D H T T Y PE
Sbjct: 149 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 208
Query: 460 QLTDKS-DVYSFGVVLIELISSMPAVDMNRHRHEIN 494
+ KS D++S G +L E++S+ P + ++N
Sbjct: 209 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 244
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 105/216 (48%), Gaps = 19/216 (8%)
Query: 290 LGDGGFGTV--YYGKLKDGREVAVKRLYDNNYRRV-EQFMNEVEILTRLRHKNLVSLFGC 346
+G+G +G V Y L R VA+K++ ++ ++ + E++IL R RH+N++ +
Sbjct: 28 IGEGAYGMVCSAYDNLNKVR-VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 86
Query: 347 TSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAI-----ETASALAYLHA 401
+ + + V D + D K LL N I + L Y+H+
Sbjct: 87 IRAPT-----IEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIHS 139
Query: 402 SDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVS--TAPQGTPGYVDPEYHQCY 459
++++HRD+K +N+LL++ +K+ DFGL+R+ D H T T Y PE
Sbjct: 140 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 199
Query: 460 QLTDKS-DVYSFGVVLIELISSMPAVDMNRHRHEIN 494
+ KS D++S G +L E++S+ P + ++N
Sbjct: 200 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 235
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 105/216 (48%), Gaps = 19/216 (8%)
Query: 290 LGDGGFGTV--YYGKLKDGREVAVKRLYDNNYRRV-EQFMNEVEILTRLRHKNLVSLFGC 346
+G+G +G V Y L R VA+K++ ++ ++ + E++IL R RH+N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVR-VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 93
Query: 347 TSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAI-----ETASALAYLHA 401
+ + + V D + D K LL N I + L Y+H+
Sbjct: 94 IRAPT-----IEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIHS 146
Query: 402 SDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVS--TAPQGTPGYVDPEYHQCY 459
++++HRD+K +N+LL++ +K+ DFGL+R+ D H T T Y PE
Sbjct: 147 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 460 QLTDKS-DVYSFGVVLIELISSMPAVDMNRHRHEIN 494
+ KS D++S G +L E++S+ P + ++N
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 242
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 102/221 (46%), Gaps = 21/221 (9%)
Query: 281 TNDFSREKELGDGGFGTVYY-GKLKDGREVAVK-----RLYDNNYRRVEQFMNEVEILTR 334
T+++ +++G G F V KL G E A K +L +++++E+ E I
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLER---EARICRL 59
Query: 335 LRHKNLVSLFGCTSRYSQGL-LLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETA 393
L+H N+V L S +G LV++ V G +L D + + +
Sbjct: 60 LKHSNIVRLHDSIS--EEGFHYLVFDLVTGG----ELFEDIVAREYYSEADASHCIQQIL 113
Query: 394 SALAYLHASDIIHRDVKTNNILLDS---NFCVKVADFGLSRLFPLDVTHVSTAPQGTPGY 450
A+ + H ++HRD+K N+LL S VK+ADFGL+ D GTPGY
Sbjct: 114 EAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGD-QQAWFGFAGTPGY 172
Query: 451 VDPEYHQCYQLTDKSDVYSFGVVL-IELISSMPAVDMNRHR 490
+ PE + D+++ GV+L I L+ P D ++H+
Sbjct: 173 LSPEVLRKEAYGKPVDIWACGVILYILLVGYPPFWDEDQHK 213
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 105/216 (48%), Gaps = 19/216 (8%)
Query: 290 LGDGGFGTV--YYGKLKDGREVAVKRLYDNNYRRV-EQFMNEVEILTRLRHKNLVSLFGC 346
+G+G +G V Y L R VA+K++ ++ ++ + E++IL R RH+N++ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVR-VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 87
Query: 347 TSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAI-----ETASALAYLHA 401
+ + + V D + D K LL N I + L Y+H+
Sbjct: 88 IRAPT-----IEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIHS 140
Query: 402 SDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVS--TAPQGTPGYVDPEYHQCY 459
++++HRD+K +N+LL++ +K+ DFGL+R+ D H T T Y PE
Sbjct: 141 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 200
Query: 460 QLTDKS-DVYSFGVVLIELISSMPAVDMNRHRHEIN 494
+ KS D++S G +L E++S+ P + ++N
Sbjct: 201 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 236
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 88/202 (43%), Gaps = 10/202 (4%)
Query: 290 LGDGGFGTVYYGKLKDGREVAVKRLYDNNY----RRVEQFMNEVEILTRLRHKNLVSLFG 345
LG GGF + D +EV ++ + + E+ E+ I L H+++V G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 346 CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDII 405
+ + +V E ++ +LH R LT P + YLH + +I
Sbjct: 85 FFED-NDFVFVVLELCRRRSLL-ELHKRRKA---LTEPEARYYLRQIVLGCQYLHRNRVI 139
Query: 406 HRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQLTDKS 465
HRD+K N+ L+ + VK+ DFGL+ D T GTP Y+ PE + +
Sbjct: 140 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTL-CGTPNYIAPEVLSKKGHSFEV 198
Query: 466 DVYSFGVVLIELISSMPAVDMN 487
DV+S G ++ L+ P + +
Sbjct: 199 DVWSIGCIMYTLLVGKPPFETS 220
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 97/208 (46%), Gaps = 35/208 (16%)
Query: 288 KELGDGGFGTV--YYGKLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVSL 343
K +G G G V Y + D R VA+K+L N ++ E+ ++ + HKN++SL
Sbjct: 30 KPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISL 88
Query: 344 FGC-----TSRYSQGLLLVYEFV-ANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
T Q + LV E + AN Q+ D + L + + +
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLY--------QMLXGIK 140
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSR-------LFPLDVTHVSTAPQGTPGY 450
+LH++ IIHRD+K +NI++ S+ +K+ DFGL+R + P VT AP+ G
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG- 199
Query: 451 VDPEYHQCYQLTDKSDVYSFGVVLIELI 478
Y+ + D++S G ++ E++
Sbjct: 200 ------MGYK--ENVDIWSVGCIMGEMV 219
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 97/204 (47%), Gaps = 18/204 (8%)
Query: 288 KELGDGGFGTVYYGKLKD-GREVAVK----RLYDNNYRRV--EQFMNEVEILTRLRHKNL 340
+ELG G F V + K G+E A K R ++ R V E+ EV IL +RH N+
Sbjct: 11 EELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNI 70
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
++L + ++L+ E V+ G + D L A+ LT + + YLH
Sbjct: 71 ITLHDIFENKTD-VVLILELVSGGELFDFL----AEKESLTEDEATQFLKQILDGVHYLH 125
Query: 401 ASDIIHRDVKTNNI-LLDSNF---CVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYH 456
+ I H D+K NI LLD N +K+ DFG++ ++ + GTP +V PE
Sbjct: 126 SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH--KIEAGNEFKNIFGTPEFVAPEIV 183
Query: 457 QCYQLTDKSDVYSFGVVLIELISS 480
L ++D++S GV+ L+S
Sbjct: 184 NYEPLGLEADMWSIGVITYILLSG 207
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 88/202 (43%), Gaps = 10/202 (4%)
Query: 290 LGDGGFGTVYYGKLKDGREVAVKRLYDNNY----RRVEQFMNEVEILTRLRHKNLVSLFG 345
LG GGF + D +EV ++ + + E+ E+ I L H+++V G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 346 CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDII 405
+ + +V E ++ +LH R LT P + YLH + +I
Sbjct: 85 FFED-NDFVFVVLELCRRRSLL-ELHKRRKA---LTEPEARYYLRQIVLGCQYLHRNRVI 139
Query: 406 HRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQLTDKS 465
HRD+K N+ L+ + VK+ DFGL+ D T GTP Y+ PE + +
Sbjct: 140 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTL-CGTPNYIAPEVLSKKGHSFEV 198
Query: 466 DVYSFGVVLIELISSMPAVDMN 487
DV+S G ++ L+ P + +
Sbjct: 199 DVWSIGCIMYTLLVGKPPFETS 220
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 75/161 (46%), Gaps = 15/161 (9%)
Query: 278 AEATNDFSREKELGDGGFGTVYYGKLKD-GREVAVKRLYDNNYR--------RVEQFMNE 328
E + +S LG G FG V+ K+ +EV VK + ++ + E
Sbjct: 20 GEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLE 79
Query: 329 VEILTRLRHKNLVSLFGCTSRYSQGLL-LVYEFVANGTVADQLHGDRAKHGLLTWPIRMN 387
+ IL+R+ H N++ + +QG LV E +G L +H L P+
Sbjct: 80 IAILSRVEHANIIKVLDIFE--NQGFFQLVMEKHGSGL---DLFAFIDRHPRLDEPLASY 134
Query: 388 IAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFG 428
I + SA+ YL DIIHRD+K NI++ +F +K+ DFG
Sbjct: 135 IFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFG 175
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 88/202 (43%), Gaps = 10/202 (4%)
Query: 290 LGDGGFGTVYYGKLKDGREVAVKRLYDNNY----RRVEQFMNEVEILTRLRHKNLVSLFG 345
LG GGF + D +EV ++ + + E+ E+ I L H+++V G
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 346 CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDII 405
+ + +V E ++ +LH R LT P + YLH + +I
Sbjct: 89 FFED-NDFVFVVLELCRRRSLL-ELHKRRKA---LTEPEARYYLRQIVLGCQYLHRNRVI 143
Query: 406 HRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQLTDKS 465
HRD+K N+ L+ + VK+ DFGL+ D T GTP Y+ PE + +
Sbjct: 144 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTL-CGTPNYIAPEVLSKKGHSFEV 202
Query: 466 DVYSFGVVLIELISSMPAVDMN 487
DV+S G ++ L+ P + +
Sbjct: 203 DVWSIGCIMYTLLVGKPPFETS 224
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 90/206 (43%), Gaps = 10/206 (4%)
Query: 284 FSREKELGDGGFGTVYYGKLKDGREVAVKRLYDNNY----RRVEQFMNEVEILTRLRHKN 339
+ R + LG GGF Y D +EV ++ + + E+ E+ I L + +
Sbjct: 44 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPH 103
Query: 340 LVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYL 399
+V G + +V E ++ +LH R +T P +T + YL
Sbjct: 104 VVGFHGFFED-DDFVYVVLEICRRRSLL-ELHKRRKA---VTEPEARYFMRQTIQGVQYL 158
Query: 400 HASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCY 459
H + +IHRD+K N+ L+ + VK+ DFGL+ D T GTP Y+ PE
Sbjct: 159 HNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTL-CGTPNYIAPEVLCKK 217
Query: 460 QLTDKSDVYSFGVVLIELISSMPAVD 485
+ + D++S G +L L+ P +
Sbjct: 218 GHSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 96/203 (47%), Gaps = 18/203 (8%)
Query: 288 KELGDGGFGTVYYGKLKD-GREVAVK----RLYDNNYRRV--EQFMNEVEILTRLRHKNL 340
+ELG G F V + K G + A K R ++ R V E EV IL ++H N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
++L + ++L+ E VA G + D L A+ LT + + + YLH
Sbjct: 77 ITLHEVYENKTD-VILILELVAGGELFDFL----AEKESLTEEEATEFLKQILNGVYYLH 131
Query: 401 ASDIIHRDVKTNNI-LLDSNF---CVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYH 456
+ I H D+K NI LLD N +K+ DFGL+ +D + GTP +V PE
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIFGTPAFVAPEIV 189
Query: 457 QCYQLTDKSDVYSFGVVLIELIS 479
L ++D++S GV+ L+S
Sbjct: 190 NYEPLGLEADMWSIGVITYILLS 212
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 97/216 (44%), Gaps = 35/216 (16%)
Query: 290 LGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEIL--TRLRHKNLVSLFGC- 346
+G G +G V+ G + G VAVK + R + + E E+ LRH+N++
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIF---SSRDEKSWFRETELYNTVMLRHENILGFIASD 71
Query: 347 -TSRYSQG-LLLVYEFVANGTVADQLHGDRAKHGLLTWPIR--MNIAIETASALAYLHAS 402
TSR+S L L+ + G++ D L L T + I + AS LA+LH
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQ-------LTTLDTVSCLRIVLSIASGLAHLHIE 124
Query: 403 --------DIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTH--VSTAPQ-GTPGYV 451
I HRD+K+ NIL+ N +AD GL+ + V P+ GT Y+
Sbjct: 125 IFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYM 184
Query: 452 DPEYH------QCYQLTDKSDVYSFGVVLIELISSM 481
PE C+ + D+++FG+VL E+ M
Sbjct: 185 APEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRM 220
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 105/216 (48%), Gaps = 19/216 (8%)
Query: 290 LGDGGFGTV--YYGKLKDGREVAVKRLYDNNYRRV-EQFMNEVEILTRLRHKNLVSLFGC 346
+G+G +G V Y + R VA+K++ ++ ++ + E++IL R RH+N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVR-VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 89
Query: 347 TSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAI-----ETASALAYLHA 401
+ + + V D + D K LL N I + L Y+H+
Sbjct: 90 IRAPT-----IEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIHS 142
Query: 402 SDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVS--TAPQGTPGYVDPEYHQCY 459
++++HRD+K +N+LL++ +K+ DFGL+R+ D H T T Y PE
Sbjct: 143 ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 460 QLTDKS-DVYSFGVVLIELISSMPAVDMNRHRHEIN 494
+ KS D++S G +L E++S+ P + ++N
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 238
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 97/214 (45%), Gaps = 31/214 (14%)
Query: 290 LGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEIL--TRLRHKNLVSLFGC- 346
+G G +G V+ G + G VAVK + R + + E E+ LRH+N++
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIF---SSRDEKSWFRETELYNTVMLRHENILGFIASD 71
Query: 347 -TSRYSQG-LLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHAS-- 402
TSR+S L L+ + G++ D L + L + I + AS LA+LH
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYL-----QLTTLDTVSCLRIVLSIASGLAHLHIEIF 126
Query: 403 ------DIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTH--VSTAPQ-GTPGYVDP 453
I HRD+K+ NIL+ N +AD GL+ + V P+ GT Y+ P
Sbjct: 127 GTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAP 186
Query: 454 EYH------QCYQLTDKSDVYSFGVVLIELISSM 481
E C+ + D+++FG+VL E+ M
Sbjct: 187 EVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRM 220
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 101/206 (49%), Gaps = 14/206 (6%)
Query: 281 TNDFSREKELGDGGFGTVYYGK-LKDGREVAVKRLYDN-NYRRVEQFMNEVEILTRLRH- 337
+D ELG G +G V + + G+ +AVKR+ N + ++ + +++I R
Sbjct: 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDC 65
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWP--IRMNIAIETASA 395
V+ +G R + + E + T D+ + G T P I IA+ A
Sbjct: 66 PFTVTFYGALFREGD-VWICMELM--DTSLDKFYKQVIDKGQ-TIPEDILGKIAVSIVKA 121
Query: 396 LAYLHAS-DIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTA---PQGTPGYV 451
L +LH+ +IHRDVK +N+L+++ VK+ DFG+S DV A P P +
Sbjct: 122 LEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERI 181
Query: 452 DPEYHQCYQLTDKSDVYSFGVVLIEL 477
+PE +Q + KSD++S G+ +IEL
Sbjct: 182 NPELNQ-KGYSVKSDIWSLGITMIEL 206
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 100/206 (48%), Gaps = 14/206 (6%)
Query: 281 TNDFSREKELGDGGFGTVYYGK-LKDGREVAVKRLYDN-NYRRVEQFMNEVEILTRLRH- 337
+D ELG G +G V + + G+ +AVKR+ N + ++ + +++I R
Sbjct: 50 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDC 109
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWP--IRMNIAIETASA 395
V+ +G R + + E + T D+ + G T P I IA+ A
Sbjct: 110 PFTVTFYGALFREGD-VWICMELM--DTSLDKFYKQVIDKGQ-TIPEDILGKIAVSIVKA 165
Query: 396 LAYLHAS-DIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTA---PQGTPGYV 451
L +LH+ +IHRDVK +N+L+++ VK+ DFG+S V A P P +
Sbjct: 166 LEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERI 225
Query: 452 DPEYHQCYQLTDKSDVYSFGVVLIEL 477
+PE +Q + KSD++S G+ +IEL
Sbjct: 226 NPELNQ-KGYSVKSDIWSLGITMIEL 250
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 105/216 (48%), Gaps = 19/216 (8%)
Query: 290 LGDGGFGTV--YYGKLKDGREVAVKRLYDNNYRRV-EQFMNEVEILTRLRHKNLVSLFGC 346
+G+G +G V Y L R VA+K++ ++ ++ + E++IL R RH+N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVR-VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 93
Query: 347 TSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAI-----ETASALAYLHA 401
+ + + V D + D K LL N I + L Y+H+
Sbjct: 94 IRAPT-----IEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIHS 146
Query: 402 SDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQ--GTPGYVDPEYHQCY 459
++++HRD+K +N+LL++ +K+ DFGL+R+ D H + T Y PE
Sbjct: 147 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNS 206
Query: 460 QLTDKS-DVYSFGVVLIELISSMPAVDMNRHRHEIN 494
+ KS D++S G +L E++S+ P + ++N
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 242
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 97/216 (44%), Gaps = 35/216 (16%)
Query: 290 LGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEIL--TRLRHKNLVSLFGC- 346
+G G +G V+ G + G VAVK + R + + E E+ LRH+N++
Sbjct: 45 VGKGRYGEVWRGSWQ-GENVAVKIF---SSRDEKSWFRETELYNTVMLRHENILGFIASD 100
Query: 347 -TSRYSQG-LLLVYEFVANGTVADQLHGDRAKHGLLTWPIR--MNIAIETASALAYLHAS 402
TSR+S L L+ + G++ D L L T + I + AS LA+LH
Sbjct: 101 MTSRHSSTQLWLITHYHEMGSLYDYLQ-------LTTLDTVSCLRIVLSIASGLAHLHIE 153
Query: 403 --------DIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTH--VSTAPQ-GTPGYV 451
I HRD+K+ NIL+ N +AD GL+ + V P+ GT Y+
Sbjct: 154 IFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYM 213
Query: 452 DPEYH------QCYQLTDKSDVYSFGVVLIELISSM 481
PE C+ + D+++FG+VL E+ M
Sbjct: 214 APEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRM 249
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 105/216 (48%), Gaps = 19/216 (8%)
Query: 290 LGDGGFGTV--YYGKLKDGREVAVKRLYDNNYRRV-EQFMNEVEILTRLRHKNLVSLFGC 346
+G+G +G V Y L R VA+K++ ++ ++ + E++IL R RH+N++ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVR-VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 94
Query: 347 TSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAI-----ETASALAYLHA 401
+ + + V D + D K LL N I + L Y+H+
Sbjct: 95 IRAPT-----IEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIHS 147
Query: 402 SDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQ--GTPGYVDPEYHQCY 459
++++HRD+K +N+LL++ +K+ DFGL+R+ D H + T Y PE
Sbjct: 148 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNS 207
Query: 460 QLTDKS-DVYSFGVVLIELISSMPAVDMNRHRHEIN 494
+ KS D++S G +L E++S+ P + ++N
Sbjct: 208 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 243
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 91/202 (45%), Gaps = 11/202 (5%)
Query: 282 NDFSREKELGDGGFGTVYYGKLK-DGREVAVKRLYDN---NYRRVEQFMNEVEILTRLRH 337
N+F K LG G FG V K K GR A+K L V + E +L RH
Sbjct: 148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 207
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
L +L + + L V E+ G + L +R + + E SAL
Sbjct: 208 PFLTALKYSFQTHDR-LCFVMEYANGGELFFHLSRER----VFSEDRARFYGAEIVSALD 262
Query: 398 YLHAS-DIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYH 456
YLH+ ++++RD+K N++LD + +K+ DFGL + D + T GTP Y+ PE
Sbjct: 263 YLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFC-GTPEYLAPEVL 321
Query: 457 QCYQLTDKSDVYSFGVVLIELI 478
+ D + GVV+ E++
Sbjct: 322 EDNDYGRAVDWWGLGVVMYEMM 343
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 91/202 (45%), Gaps = 11/202 (5%)
Query: 282 NDFSREKELGDGGFGTVYYGKLK-DGREVAVKRLYDN---NYRRVEQFMNEVEILTRLRH 337
N+F K LG G FG V K K GR A+K L V + E +L RH
Sbjct: 151 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 210
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
L +L + + L V E+ G + L +R + + E SAL
Sbjct: 211 PFLTALKYSFQTHDR-LCFVMEYANGGELFFHLSRER----VFSEDRARFYGAEIVSALD 265
Query: 398 YLHAS-DIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYH 456
YLH+ ++++RD+K N++LD + +K+ DFGL + D + T GTP Y+ PE
Sbjct: 266 YLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFC-GTPEYLAPEVL 324
Query: 457 QCYQLTDKSDVYSFGVVLIELI 478
+ D + GVV+ E++
Sbjct: 325 EDNDYGRAVDWWGLGVVMYEMM 346
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 107/217 (49%), Gaps = 21/217 (9%)
Query: 290 LGDGGFGTV--YYGKLKDGREVAVKRLYDNNYRRV-EQFMNEVEILTRLRHKNLVSLFGC 346
+G+G +G V Y + R VA+K++ ++ ++ + E++IL R RH+N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVR-VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 89
Query: 347 TSRYS-QGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAI-----ETASALAYLH 400
+ + + VY V D + D K LL N I + L Y+H
Sbjct: 90 IRAPTIEQMKDVY------IVQDLMETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIH 141
Query: 401 ASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVS--TAPQGTPGYVDPEYHQC 458
+++++HRD+K +N+LL++ +K+ DFGL+R+ D H T T Y PE
Sbjct: 142 SANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 459 YQLTDKS-DVYSFGVVLIELISSMPAVDMNRHRHEIN 494
+ KS D++S G +L E++S+ P + ++N
Sbjct: 202 SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 238
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 107/217 (49%), Gaps = 21/217 (9%)
Query: 290 LGDGGFGTV--YYGKLKDGREVAVKRLYDNNYRRV-EQFMNEVEILTRLRHKNLVSLFGC 346
+G+G +G V Y + R VA+K++ ++ ++ + E++IL R RH+N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVR-VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 89
Query: 347 TSRYS-QGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAI-----ETASALAYLH 400
+ + + VY V D + D K LL N I + L Y+H
Sbjct: 90 IRAPTIEQMKDVY------IVQDLMETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIH 141
Query: 401 ASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVS--TAPQGTPGYVDPEYHQC 458
+++++HRD+K +N+LL++ +K+ DFGL+R+ D H T T Y PE
Sbjct: 142 SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 459 YQLTDKS-DVYSFGVVLIELISSMPAVDMNRHRHEIN 494
+ KS D++S G +L E++S+ P + ++N
Sbjct: 202 SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 238
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 103/229 (44%), Gaps = 27/229 (11%)
Query: 263 GTVYFGVPIFSYSDLAEATNDFSREKELGDGGFGTVYYGKLKD-GREVAVK----RLYDN 317
GTV+ + Y D E ELG G F V + K G + A K R +
Sbjct: 1 GTVFRQENVDDYYDTGE---------ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKS 51
Query: 318 NYRRV--EQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRA 375
+ R V E EV IL ++H N+++L + ++L+ E VA G + D L A
Sbjct: 52 SRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTD-VILILELVAGGELFDFL----A 106
Query: 376 KHGLLTWPIRMNIAIETASALAYLHASDIIHRDVKTNNI-LLDSNFC---VKVADFGLSR 431
+ LT + + + YLH+ I H D+K NI LLD N +K+ DFGL+
Sbjct: 107 EKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166
Query: 432 LFPLDVTHVSTAPQGTPGYVDPEYHQCYQLTDKSDVYSFGVVLIELISS 480
+D + GTP +V PE L ++D++S GV+ L+S
Sbjct: 167 --KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 124/302 (41%), Gaps = 53/302 (17%)
Query: 290 LGDGGFGTVYYGK-LKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLR-HKNLV------ 341
L +GGF VY + + GRE A+KRL N + + EV + +L H N+V
Sbjct: 36 LAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAA 95
Query: 342 SLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHA 401
S+ S Q L+ + G + + L ++ G L+ + I +T A+ ++H
Sbjct: 96 SIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESR-GPLSCDTVLKIFYQTCRAVQHMHR 154
Query: 402 SD--IIHRDVKTNNILLDSNFCVKVADFGLS----------------RLFPLDVTHVSTA 443
IIHRD+K N+LL + +K+ DFG + L ++T +T
Sbjct: 155 QKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTP 214
Query: 444 PQGTPGYVDPEYHQCYQLTDKSDVYSFGVVLIEL-ISSMPAVDMNRHRHEINLANLAINK 502
TP +D + + + +K D+++ G +L L P D + R ++ +
Sbjct: 215 MYRTPEIID--LYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIVNGKYSIPPHD 272
Query: 503 IQKCAFDELIDPCLGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVLAELQRIKSG 562
Q F LI LQ N E R S+ EV+ +LQ I +
Sbjct: 273 TQYTVFHSLIRA-----------------------MLQVNPEERLSIAEVVHQLQEIAAA 309
Query: 563 KS 564
++
Sbjct: 310 RN 311
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 105/216 (48%), Gaps = 19/216 (8%)
Query: 290 LGDGGFGTV--YYGKLKDGREVAVKRLYDNNYRRV-EQFMNEVEILTRLRHKNLVSLFGC 346
+G+G +G V Y L R VA++++ ++ ++ + E++IL R RH+N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVR-VAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 93
Query: 347 TSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAI-----ETASALAYLHA 401
+ + + V D + D K LL N I + L Y+H+
Sbjct: 94 IRAPT-----IEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIHS 146
Query: 402 SDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVS--TAPQGTPGYVDPEYHQCY 459
++++HRD+K +N+LL++ +K+ DFGL+R+ D H T T Y PE
Sbjct: 147 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 460 QLTDKS-DVYSFGVVLIELISSMPAVDMNRHRHEIN 494
+ KS D++S G +L E++S+ P + ++N
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 242
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 21/201 (10%)
Query: 288 KELGDGGFGTV--YYGKLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVSL 343
K +G G G V Y + D R VA+K+L N ++ E+ ++ + HKN++SL
Sbjct: 30 KPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISL 88
Query: 344 FGC-----TSRYSQGLLLVYEFV-ANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
T Q + LV E + AN Q+ D + L + + +
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLY--------QMLCGIK 140
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQ 457
+LH++ IIHRD+K +NI++ S+ +K+ DFGL+R + + T T Y PE
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 458 CYQLTDKSDVYSFGVVLIELI 478
+ D++S G ++ E++
Sbjct: 199 GMGYKENVDIWSVGCIMGEMV 219
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 105/216 (48%), Gaps = 19/216 (8%)
Query: 290 LGDGGFGTV--YYGKLKDGREVAVKRLYDNNYRRV-EQFMNEVEILTRLRHKNLVSLFGC 346
+G+G +G V Y + R VA+K++ ++ ++ + E++IL R RH+N++ +
Sbjct: 39 IGEGAYGMVCSAYDNVNKVR-VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 97
Query: 347 TSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAI-----ETASALAYLHA 401
+ + + V D + D K LL N I + L Y+H+
Sbjct: 98 IRAPT-----IEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIHS 150
Query: 402 SDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVS--TAPQGTPGYVDPEYHQCY 459
++++HRD+K +N+LL++ +K+ DFGL+R+ D H T T Y PE
Sbjct: 151 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 210
Query: 460 QLTDKS-DVYSFGVVLIELISSMPAVDMNRHRHEIN 494
+ KS D++S G +L E++S+ P + ++N
Sbjct: 211 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 246
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 105/216 (48%), Gaps = 19/216 (8%)
Query: 290 LGDGGFGTV--YYGKLKDGREVAVKRLYDNNYRRV-EQFMNEVEILTRLRHKNLVSLFGC 346
+G+G +G V Y + R VA+K++ ++ ++ + E++IL R RH+N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVR-VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 89
Query: 347 TSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAI-----ETASALAYLHA 401
+ + + V D + D K LL N I + L Y+H+
Sbjct: 90 IRAPT-----IEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIHS 142
Query: 402 SDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVS--TAPQGTPGYVDPEYHQCY 459
++++HRD+K +N+LL++ +K+ DFGL+R+ D H T T Y PE
Sbjct: 143 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 460 QLTDKS-DVYSFGVVLIELISSMPAVDMNRHRHEIN 494
+ KS D++S G +L E++S+ P + ++N
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 238
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 105/216 (48%), Gaps = 19/216 (8%)
Query: 290 LGDGGFGTV--YYGKLKDGREVAVKRLYDNNYRRV-EQFMNEVEILTRLRHKNLVSLFGC 346
+G+G +G V Y + R VA+K++ ++ ++ + E++IL R RH+N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVR-VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 89
Query: 347 TSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAI-----ETASALAYLHA 401
+ + + V D + D K LL N I + L Y+H+
Sbjct: 90 IRAPT-----IEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIHS 142
Query: 402 SDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVS--TAPQGTPGYVDPEYHQCY 459
++++HRD+K +N+LL++ +K+ DFGL+R+ D H T T Y PE
Sbjct: 143 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 460 QLTDKS-DVYSFGVVLIELISSMPAVDMNRHRHEIN 494
+ KS D++S G +L E++S+ P + ++N
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 238
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 103/211 (48%), Gaps = 9/211 (4%)
Query: 290 LGDGGFGTV--YYGKLKDGREVAVKRLYDNNYRRV-EQFMNEVEILTRLRHKNLVSLFGC 346
+G+G +G V Y + R VA+K++ ++ ++ + E++IL R RH+N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVR-VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 91
Query: 347 TSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDIIH 406
+ + V + D + +H L+ + L Y+H+++++H
Sbjct: 92 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIHSANVLH 149
Query: 407 RDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVS--TAPQGTPGYVDPEYHQCYQLTDK 464
RD+K +N+LL++ +K+ DFGL+R+ D H T T Y PE + K
Sbjct: 150 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 209
Query: 465 S-DVYSFGVVLIELISSMPAVDMNRHRHEIN 494
S D++S G +L E++S+ P + ++N
Sbjct: 210 SIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 240
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 103/228 (45%), Gaps = 27/228 (11%)
Query: 263 GTVYFGVPIFSYSDLAEATNDFSREKELGDGGFGTVYYGKLKD-GREVAVK----RLYDN 317
GTV+ + Y D E ELG G F V + K G + A K R +
Sbjct: 1 GTVFRQENVDDYYDTGE---------ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKS 51
Query: 318 NYRRV--EQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRA 375
+ R V E EV IL ++H N+++L + ++L+ E VA G + D L A
Sbjct: 52 SRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTD-VILILELVAGGELFDFL----A 106
Query: 376 KHGLLTWPIRMNIAIETASALAYLHASDIIHRDVKTNNI-LLDSNFC---VKVADFGLSR 431
+ LT + + + YLH+ I H D+K NI LLD N +K+ DFGL+
Sbjct: 107 EKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166
Query: 432 LFPLDVTHVSTAPQGTPGYVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
+D + GTP +V PE L ++D++S GV+ L+S
Sbjct: 167 --KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 212
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 96/203 (47%), Gaps = 18/203 (8%)
Query: 288 KELGDGGFGTVYYGKLKD-GREVAVK----RLYDNNYRRV--EQFMNEVEILTRLRHKNL 340
+ELG G F V + K G + A K R ++ R V E EV IL ++H N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
++L + ++L+ E VA G + D L A+ LT + + + YLH
Sbjct: 77 ITLHEVYENKTD-VILILELVAGGELFDFL----AEKESLTEEEATEFLKQILNGVYYLH 131
Query: 401 ASDIIHRDVKTNNI-LLDSNF---CVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYH 456
+ I H D+K NI LLD N +K+ DFGL+ +D + GTP +V PE
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIFGTPEFVAPEIV 189
Query: 457 QCYQLTDKSDVYSFGVVLIELIS 479
L ++D++S GV+ L+S
Sbjct: 190 NYEPLGLEADMWSIGVITYILLS 212
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 99/214 (46%), Gaps = 31/214 (14%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLR-HKN---LVSLF 344
LG+G + V L++G+E AVK + + EVE L + + +KN L+ F
Sbjct: 21 LGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIEFF 80
Query: 345 GCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDI 404
+R+ LV+E + G++ H + KH + + A+AL +LH I
Sbjct: 81 EDDTRF----YLVFEKLQGGSIL--AHIQKQKH--FNEREASRVVRDVAAALDFLHTKGI 132
Query: 405 IHRDVKTNNILLDSN---FCVKVADFGLSRLFPLD------VTHVSTAPQGTPGYVDPEY 455
HRD+K NIL +S VK+ DF L L+ T T P G+ Y+ PE
Sbjct: 133 AHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEV 192
Query: 456 HQCYQLTDKS-------DVYSFGVVLIELISSMP 482
+ + TD++ D++S GVVL ++S P
Sbjct: 193 VEVF--TDQATFYDKRCDLWSLGVVLYIMLSGYP 224
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 96/203 (47%), Gaps = 18/203 (8%)
Query: 288 KELGDGGFGTVYYGKLKD-GREVAVK----RLYDNNYRRV--EQFMNEVEILTRLRHKNL 340
+ELG G F V + K G + A K R ++ R V E EV IL ++H N+
Sbjct: 17 EELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
++L + ++L+ E VA G + D L A+ LT + + + YLH
Sbjct: 77 ITLHEVYENKTD-VILILELVAGGELFDFL----AEKESLTEEEATEFLKQILNGVYYLH 131
Query: 401 ASDIIHRDVKTNNI-LLDSNFC---VKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYH 456
+ I H D+K NI LLD N +K+ DFGL+ +D + GTP +V PE
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIFGTPEFVAPEIV 189
Query: 457 QCYQLTDKSDVYSFGVVLIELIS 479
L ++D++S GV+ L+S
Sbjct: 190 NYEPLGLEADMWSIGVITYILLS 212
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 98/213 (46%), Gaps = 20/213 (9%)
Query: 277 LAEATNDFSREKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQ-----FMNEVEI 331
L D+ K +G G FG V + K ++V +L + + +++ F E +I
Sbjct: 70 LQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLL-SKFEMIKRSDSAFFWEERDI 128
Query: 332 LTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIE 391
+ +V LF C + + L +V E++ G + + + + E
Sbjct: 129 MAFANSPWVVQLF-CAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKF-----YTAE 182
Query: 392 TASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGL-SRLFPLDVTHVSTAPQGTPGY 450
AL +H+ +IHRDVK +N+LLD + +K+ADFG ++ + H TA GTP Y
Sbjct: 183 VVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTA-VGTPDY 241
Query: 451 VDPEYHQCYQLTD-----KSDVYSFGVVLIELI 478
+ PE + Q D + D +S GV L E++
Sbjct: 242 ISPEVLKS-QGGDGYYGRECDWWSVGVFLFEML 273
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 105/216 (48%), Gaps = 19/216 (8%)
Query: 290 LGDGGFGTV--YYGKLKDGREVAVKRLYDNNYRRV-EQFMNEVEILTRLRHKNLVSLFGC 346
+G+G +G V Y + R VA+K++ ++ ++ + E++IL R RH+N++ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVR-VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 109
Query: 347 TSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAI-----ETASALAYLHA 401
+ + + V D + D K LL N I + L Y+H+
Sbjct: 110 IRAPT-----IEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIHS 162
Query: 402 SDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVS--TAPQGTPGYVDPEYHQCY 459
++++HRD+K +N+LL++ +K+ DFGL+R+ D H T T Y PE
Sbjct: 163 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 222
Query: 460 QLTDKS-DVYSFGVVLIELISSMPAVDMNRHRHEIN 494
+ KS D++S G +L E++S+ P + ++N
Sbjct: 223 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 258
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 103/223 (46%), Gaps = 25/223 (11%)
Query: 281 TNDFSREKELGDGGFGTVYY-GKLKDGREVAV-----KRLYDNNYRRVEQFMNEVEILTR 334
T ++ +ELG G F V K+ G+E A K+L +++++E+ E I
Sbjct: 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLER---EARICRL 66
Query: 335 LRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETAS 394
L+H N+V L S L +++ V G +L D + + +
Sbjct: 67 LKHPNIVRLHDSISEEGHHYL-IFDLVTGG----ELFEDIVAREYYSEADASHCIQQILE 121
Query: 395 ALAYLHASDIIHRDVKTNNILLDSNF---CVKVADFGLSRLFPLDVTHVSTAP---QGTP 448
A+ + H ++HR++K N+LL S VK+ADFGL+ ++V A GTP
Sbjct: 122 AVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLA----IEVEGEQQAWFGFAGTP 177
Query: 449 GYVDPEYHQCYQLTDKSDVYSFGVVL-IELISSMPAVDMNRHR 490
GY+ PE + D+++ GV+L I L+ P D ++HR
Sbjct: 178 GYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHR 220
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 96/203 (47%), Gaps = 18/203 (8%)
Query: 288 KELGDGGFGTVYYGKLKD-GREVAVK----RLYDNNYRRV--EQFMNEVEILTRLRHKNL 340
+ELG G F V + K G + A K R ++ R V E EV IL ++H N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
++L + ++L+ E VA G + D L A+ LT + + + YLH
Sbjct: 77 ITLHEVYENKTD-VILILELVAGGELFDFL----AEKESLTEEEATEFLKQILNGVYYLH 131
Query: 401 ASDIIHRDVKTNNI-LLDSNFC---VKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYH 456
+ I H D+K NI LLD N +K+ DFGL+ +D + GTP +V PE
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIFGTPEFVAPEIV 189
Query: 457 QCYQLTDKSDVYSFGVVLIELIS 479
L ++D++S GV+ L+S
Sbjct: 190 NYEPLGLEADMWSIGVITYILLS 212
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 101/209 (48%), Gaps = 37/209 (17%)
Query: 288 KELGDGGFGTV---YYGKLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVS 342
K +G G G V Y L+ R VA+K+L N ++ E+ ++ + HKN++
Sbjct: 30 KPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIG 87
Query: 343 LFGC-TSRYS----QGLLLVYEFV-ANGTVADQLHGDRAKHGLLTWPIRMNIAIETASAL 396
L T + S Q + +V E + AN + Q+ D + L + + + I
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIK------- 140
Query: 397 AYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSR-------LFPLDVTHVSTAPQGTPG 449
+LH++ IIHRD+K +NI++ S+ +K+ DFGL+R + P VT AP+ G
Sbjct: 141 -HLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 450 YVDPEYHQCYQLTDKSDVYSFGVVLIELI 478
Y+ + D++S GV++ E+I
Sbjct: 200 -------MGYK--ENVDIWSVGVIMGEMI 219
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 96/203 (47%), Gaps = 18/203 (8%)
Query: 288 KELGDGGFGTVYYGKLKD-GREVAVK----RLYDNNYRRV--EQFMNEVEILTRLRHKNL 340
+ELG G F V + K G + A K R ++ R V E EV IL ++H N+
Sbjct: 16 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 75
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
++L + ++L+ E VA G + D L A+ LT + + + YLH
Sbjct: 76 ITLHEVYENKTD-VILILELVAGGELFDFL----AEKESLTEEEATEFLKQILNGVYYLH 130
Query: 401 ASDIIHRDVKTNNI-LLDSNFC---VKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYH 456
+ I H D+K NI LLD N +K+ DFGL+ +D + GTP +V PE
Sbjct: 131 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIFGTPEFVAPEIV 188
Query: 457 QCYQLTDKSDVYSFGVVLIELIS 479
L ++D++S GV+ L+S
Sbjct: 189 NYEPLGLEADMWSIGVITYILLS 211
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 21/201 (10%)
Query: 288 KELGDGGFGTV--YYGKLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVSL 343
K +G G G V Y + D R VA+K+L N ++ E+ ++ + HKN++SL
Sbjct: 30 KPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISL 88
Query: 344 FGC-----TSRYSQGLLLVYEFV-ANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
T Q + LV E + AN Q+ D + L + + +
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLY--------QMLCGIK 140
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQ 457
+LH++ IIHRD+K +NI++ S+ +K+ DFGL+R + + T T Y PE
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 458 CYQLTDKSDVYSFGVVLIELI 478
+ D++S G ++ E++
Sbjct: 199 GMGYKENVDIWSVGCIMGEMV 219
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 25/216 (11%)
Query: 288 KELGDGGFGTVYY-GKLKDGREVAVK-----RLYDNNYRRVEQFMNEVEILTRLRHKNLV 341
+ELG G F V K+ G+E A K +L +++++E+ E I L+H N+V
Sbjct: 28 EELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLER---EARICRLLKHPNIV 84
Query: 342 SLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHA 401
L S L +++ V G +L D + + + A+ + H
Sbjct: 85 RLHDSISEEGHHYL-IFDLVTGG----ELFEDIVAREYYSEADASHCIQQILEAVLHCHQ 139
Query: 402 SDIIHRDVKTNNILLDSNF---CVKVADFGLSRLFPLDVTHVSTAP---QGTPGYVDPEY 455
++HRD+K N+LL S VK+ADFGL+ ++V A GTPGY+ PE
Sbjct: 140 MGVVHRDLKPENLLLASKLKGAAVKLADFGLA----IEVEGEQQAWFGFAGTPGYLSPEV 195
Query: 456 HQCYQLTDKSDVYSFGVVL-IELISSMPAVDMNRHR 490
+ D+++ GV+L I L+ P D ++HR
Sbjct: 196 LRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHR 231
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 101/208 (48%), Gaps = 35/208 (16%)
Query: 288 KELGDGGFGTVY--YGKLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVSL 343
K +G G G V Y + + R VA+K+L N ++ E+ ++ + HKN++ L
Sbjct: 30 KPIGSGAQGIVVAAYDAILE-RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGL 88
Query: 344 FGC-TSRYS----QGLLLVYEFV-ANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
T + S Q + +V E + AN + Q+ D + L + + + I
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIK-------- 140
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSR-------LFPLDVTHVSTAPQGTPGY 450
+LH++ IIHRD+K +NI++ S+ +K+ DFGL+R + P VT AP+ G
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG- 199
Query: 451 VDPEYHQCYQLTDKSDVYSFGVVLIELI 478
Y+ + D++S GV++ E+I
Sbjct: 200 ------MGYK--ENVDIWSVGVIMGEMI 219
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 96/203 (47%), Gaps = 18/203 (8%)
Query: 288 KELGDGGFGTVYYGKLKD-GREVAVK----RLYDNNYRRV--EQFMNEVEILTRLRHKNL 340
+ELG G F V + K G + A K R ++ R V E EV IL ++H N+
Sbjct: 16 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 75
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
++L + ++L+ E VA G + D L A+ LT + + + YLH
Sbjct: 76 ITLHEVYENKTD-VILILELVAGGELFDFL----AEKESLTEEEATEFLKQILNGVYYLH 130
Query: 401 ASDIIHRDVKTNNI-LLDSNFC---VKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYH 456
+ I H D+K NI LLD N +K+ DFGL+ +D + GTP +V PE
Sbjct: 131 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIFGTPEFVAPEIV 188
Query: 457 QCYQLTDKSDVYSFGVVLIELIS 479
L ++D++S GV+ L+S
Sbjct: 189 NYEPLGLEADMWSIGVITYILLS 211
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 96/203 (47%), Gaps = 18/203 (8%)
Query: 288 KELGDGGFGTVYYGKLKD-GREVAVK----RLYDNNYRRV--EQFMNEVEILTRLRHKNL 340
+ELG G F V + K G + A K R ++ R V E EV IL ++H N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
++L + ++L+ E VA G + D L A+ LT + + + YLH
Sbjct: 77 ITLHEVYENKTD-VILILELVAGGELFDFL----AEKESLTEEEATEFLKQILNGVYYLH 131
Query: 401 ASDIIHRDVKTNNI-LLDSNFC---VKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYH 456
+ I H D+K NI LLD N +K+ DFGL+ +D + GTP +V PE
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIFGTPEFVAPEIV 189
Query: 457 QCYQLTDKSDVYSFGVVLIELIS 479
L ++D++S GV+ L+S
Sbjct: 190 NYEPLGLEADMWSIGVITYILLS 212
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 97/208 (46%), Gaps = 35/208 (16%)
Query: 288 KELGDGGFGTV--YYGKLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVSL 343
K +G G G V Y + D R VA+K+L N ++ E+ ++ + HKN++SL
Sbjct: 30 KPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL 88
Query: 344 FGC-----TSRYSQGLLLVYEFV-ANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
T Q + LV E + AN Q+ D + L + + +
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLY--------QMLXGIK 140
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSR-------LFPLDVTHVSTAPQGTPGY 450
+LH++ IIHRD+K +NI++ S+ +K+ DFGL+R + P VT AP+ G
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG- 199
Query: 451 VDPEYHQCYQLTDKSDVYSFGVVLIELI 478
Y+ + D++S G ++ E++
Sbjct: 200 ------MGYK--ENVDIWSVGCIMGEMV 219
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 97/208 (46%), Gaps = 35/208 (16%)
Query: 288 KELGDGGFGTV--YYGKLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVSL 343
K +G G G V Y + D R VA+K+L N ++ E+ ++ + HKN++SL
Sbjct: 23 KPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL 81
Query: 344 FGC-----TSRYSQGLLLVYEFV-ANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
T Q + LV E + AN Q+ D + L + + +
Sbjct: 82 LNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLY--------QMLXGIK 133
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSR-------LFPLDVTHVSTAPQGTPGY 450
+LH++ IIHRD+K +NI++ S+ +K+ DFGL+R + P VT AP+ G
Sbjct: 134 HLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG- 192
Query: 451 VDPEYHQCYQLTDKSDVYSFGVVLIELI 478
Y+ + D++S G ++ E++
Sbjct: 193 ------MGYK--ENVDIWSVGCIMGEMV 212
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 96/204 (47%), Gaps = 18/204 (8%)
Query: 288 KELGDGGFGTVYYGKLKD-GREVAVK----RLYDNNYRRV--EQFMNEVEILTRLRHKNL 340
+ELG G F V + K G + A K R ++ R V E EV IL ++H N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
++L + ++L+ E VA G + D L A+ LT + + + YLH
Sbjct: 77 ITLHEVYENKTD-VILILELVAGGELFDFL----AEKESLTEEEATEFLKQILNGVYYLH 131
Query: 401 ASDIIHRDVKTNNI-LLDSNFC---VKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYH 456
+ I H D+K NI LLD N +K+ DFGL+ +D + GTP +V PE
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIFGTPEFVAPEIV 189
Query: 457 QCYQLTDKSDVYSFGVVLIELISS 480
L ++D++S GV+ L+S
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSG 213
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 96/204 (47%), Gaps = 18/204 (8%)
Query: 288 KELGDGGFGTVYYGKLKD-GREVAVK----RLYDNNYRRV--EQFMNEVEILTRLRHKNL 340
+ELG G F V + K G + A K R ++ R V E EV IL ++H N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
++L + ++L+ E VA G + D L A+ LT + + + YLH
Sbjct: 77 ITLHEVYENKTD-VILILELVAGGELFDFL----AEKESLTEEEATEFLKQILNGVYYLH 131
Query: 401 ASDIIHRDVKTNNI-LLDSNFC---VKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYH 456
+ I H D+K NI LLD N +K+ DFGL+ +D + GTP +V PE
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIFGTPEFVAPEIV 189
Query: 457 QCYQLTDKSDVYSFGVVLIELISS 480
L ++D++S GV+ L+S
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSG 213
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 91/207 (43%), Gaps = 10/207 (4%)
Query: 276 DLAEATNDFSREKELGDGGFGTVYYG-KLKDGREVAVKRLYDNNY-RRVEQFMNEVEILT 333
D E + + +G GGF V + G VA+K + N + + E+E L
Sbjct: 4 DYDELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALK 63
Query: 334 RLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQL-HGDRAKHGLLTWPIRMNIAIET 392
LRH+++ L+ + + +V E+ G + D + DR R +
Sbjct: 64 NLRHQHICQLYHVLET-ANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFR-----QI 117
Query: 393 ASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVD 452
SA+AY+H+ HRD+K N+L D +K+ DFGL + + G+ Y
Sbjct: 118 VSAVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAA 177
Query: 453 PEYHQCYQ-LTDKSDVYSFGVVLIELI 478
PE Q L ++DV+S G++L L+
Sbjct: 178 PELIQGKSYLGSEADVWSMGILLYVLM 204
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 87/202 (43%), Gaps = 10/202 (4%)
Query: 290 LGDGGFGTVYYGKLKDGREVAVKRLYDNNY----RRVEQFMNEVEILTRLRHKNLVSLFG 345
LG GGF + D +EV ++ + + E+ E+ I L H+++V G
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 346 CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDII 405
+ + +V E ++ +LH R LT P + YLH + +I
Sbjct: 109 FFED-NDFVFVVLELCRRRSLL-ELHKRRKA---LTEPEARYYLRQIVLGCQYLHRNRVI 163
Query: 406 HRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQLTDKS 465
HRD+K N+ L+ + VK+ DFGL+ D GTP Y+ PE + +
Sbjct: 164 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVL-CGTPNYIAPEVLSKKGHSFEV 222
Query: 466 DVYSFGVVLIELISSMPAVDMN 487
DV+S G ++ L+ P + +
Sbjct: 223 DVWSIGCIMYTLLVGKPPFETS 244
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 96/204 (47%), Gaps = 18/204 (8%)
Query: 288 KELGDGGFGTVYYGKLKD-GREVAVK----RLYDNNYRRV--EQFMNEVEILTRLRHKNL 340
+ELG G F V + K G + A K R ++ R V E EV IL ++H N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
++L + ++L+ E VA G + D L A+ LT + + + YLH
Sbjct: 77 ITLHEVYENKTD-VILILELVAGGELFDFL----AEKESLTEEEATEFLKQILNGVYYLH 131
Query: 401 ASDIIHRDVKTNNI-LLDSNFC---VKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYH 456
+ I H D+K NI LLD N +K+ DFGL+ +D + GTP +V PE
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIFGTPEFVAPEIV 189
Query: 457 QCYQLTDKSDVYSFGVVLIELISS 480
L ++D++S GV+ L+S
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSG 213
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 95/227 (41%), Gaps = 29/227 (12%)
Query: 269 VPIFSYSDLAEATNDFSREKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNE 328
+PI SD E K++G G FG + K E+ + + + E E
Sbjct: 12 LPIMHDSDRYELV------KDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKRE 65
Query: 329 VEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTV------ADQLHGDRAKHGLLTW 382
+ LRH N+V F L +V E+ + G + A + D A+
Sbjct: 66 IINHRSLRHPNIVR-FKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQ-- 122
Query: 383 PIRMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFC--VKVADFGLSRLFPLDVTHV 440
+ S ++Y HA + HRD+K N LLD + +K+ADFG S+ L
Sbjct: 123 --------QLISGVSYAHAMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPK 174
Query: 441 STAPQGTPGYVDPEYHQCYQLTDK-SDVYSFGVVL-IELISSMPAVD 485
S GTP Y+ PE + K +DV+S GV L + L+ + P D
Sbjct: 175 SAV--GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFED 219
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 87/202 (43%), Gaps = 10/202 (4%)
Query: 290 LGDGGFGTVYYGKLKDGREVAVKRLYDNNY----RRVEQFMNEVEILTRLRHKNLVSLFG 345
LG GGF + D +EV ++ + + E+ E+ I L H+++V G
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 346 CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDII 405
+ + +V E ++ +LH R LT P + YLH + +I
Sbjct: 107 FFED-NDFVFVVLELCRRRSLL-ELHKRRKA---LTEPEARYYLRQIVLGCQYLHRNRVI 161
Query: 406 HRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQLTDKS 465
HRD+K N+ L+ + VK+ DFGL+ D GTP Y+ PE + +
Sbjct: 162 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVL-CGTPNYIAPEVLSKKGHSFEV 220
Query: 466 DVYSFGVVLIELISSMPAVDMN 487
DV+S G ++ L+ P + +
Sbjct: 221 DVWSIGCIMYTLLVGKPPFETS 242
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 96/203 (47%), Gaps = 18/203 (8%)
Query: 288 KELGDGGFGTVYYGKLKD-GREVAVK----RLYDNNYRRV--EQFMNEVEILTRLRHKNL 340
+ELG G F V + K G + A K R ++ R V E EV IL ++H N+
Sbjct: 17 EELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
++L + ++L+ E VA G + D L A+ LT + + + YLH
Sbjct: 77 ITLHEVYENKTD-VILILELVAGGELFDFL----AEKESLTEEEATEFLKQILNGVYYLH 131
Query: 401 ASDIIHRDVKTNNI-LLDSNFC---VKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYH 456
+ I H D+K NI LLD N +K+ DFGL+ +D + GTP +V PE
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIFGTPEFVAPEIV 189
Query: 457 QCYQLTDKSDVYSFGVVLIELIS 479
L ++D++S GV+ L+S
Sbjct: 190 NYEPLGLEADMWSIGVITYILLS 212
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 89/206 (43%), Gaps = 10/206 (4%)
Query: 284 FSREKELGDGGFGTVYYGKLKDGREVAVKRLYDNNY----RRVEQFMNEVEILTRLRHKN 339
+ R + LG GGF Y D +EV ++ + + E+ E+ I L + +
Sbjct: 28 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPH 87
Query: 340 LVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYL 399
+V G + +V E ++ +LH R +T P +T + YL
Sbjct: 88 VVGFHGFFED-DDFVYVVLEICRRRSLL-ELHKRRKA---VTEPEARYFMRQTIQGVQYL 142
Query: 400 HASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCY 459
H + +IHRD+K N+ L+ + VK+ DFGL+ D GTP Y+ PE
Sbjct: 143 HNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDL-CGTPNYIAPEVLCKK 201
Query: 460 QLTDKSDVYSFGVVLIELISSMPAVD 485
+ + D++S G +L L+ P +
Sbjct: 202 GHSFEVDIWSLGCILYTLLVGKPPFE 227
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 97/199 (48%), Gaps = 16/199 (8%)
Query: 288 KELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQ-----FMNEVEILTRLRHKNLVS 342
+ +G G FG V + D +++ + Y N + VE+ E++I+ L H LV+
Sbjct: 21 RAIGKGSFGKVCIVQKNDTKKMYAMK-YMNKQKCVERNEVRNVFKELQIMQGLEHPFLVN 79
Query: 343 LFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHAS 402
L+ + + + + +V + + G + + H + H +++ I E AL YL
Sbjct: 80 LW-YSFQDEEDMFMVVDLLLGGDL--RYHLQQNVH-FKEETVKLFIC-ELVMALDYLQNQ 134
Query: 403 DIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQLT 462
IIHRD+K +NILLD + V + DF ++ + P + T ++T GT Y+ PE +
Sbjct: 135 RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE-TQITTMA-GTKPYMAPEMFSSRKGA 192
Query: 463 DKS---DVYSFGVVLIELI 478
S D +S GV EL+
Sbjct: 193 GYSFAVDWWSLGVTAYELL 211
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 78/162 (48%), Gaps = 20/162 (12%)
Query: 322 VEQFMNEVEILTRLRHKNLVSLFGCTSRYSQG-LLLVYEFVANGTVAD-----QLHGDRA 375
+EQ E+ IL +L H N+V L ++ L +V+E V G V + L D+A
Sbjct: 80 IEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQA 139
Query: 376 KHGLLTWPIRMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPL 435
+ + + YLH IIHRD+K +N+L+ + +K+ADFG+S F
Sbjct: 140 RFYFQ----------DLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKG 189
Query: 436 DVTHVSTAPQGTPGYVDPEYHQCYQ--LTDKS-DVYSFGVVL 474
+S GTP ++ PE + + K+ DV++ GV L
Sbjct: 190 SDALLSNT-VGTPAFMAPESLSETRKIFSGKALDVWAMGVTL 230
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 87/202 (43%), Gaps = 10/202 (4%)
Query: 290 LGDGGFGTVYYGKLKDGREVAVKRLYDNNY----RRVEQFMNEVEILTRLRHKNLVSLFG 345
LG GGF + D +EV ++ + + E+ E+ I L H+++V G
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 346 CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDII 405
+ + +V E ++ +LH R LT P + YLH + +I
Sbjct: 83 FFED-NDFVFVVLELCRRRSLL-ELHKRRKA---LTEPEARYYLRQIVLGCQYLHRNRVI 137
Query: 406 HRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQLTDKS 465
HRD+K N+ L+ + VK+ DFGL+ D GTP Y+ PE + +
Sbjct: 138 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVL-CGTPNYIAPEVLSKKGHSFEV 196
Query: 466 DVYSFGVVLIELISSMPAVDMN 487
DV+S G ++ L+ P + +
Sbjct: 197 DVWSIGCIMYTLLVGKPPFETS 218
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 89/206 (43%), Gaps = 10/206 (4%)
Query: 284 FSREKELGDGGFGTVYYGKLKDGREVAVKRLYDNNY----RRVEQFMNEVEILTRLRHKN 339
+ R + LG GGF Y D +EV ++ + + E+ E+ I L + +
Sbjct: 44 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPH 103
Query: 340 LVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYL 399
+V G + +V E ++ +LH R +T P +T + YL
Sbjct: 104 VVGFHGFFED-DDFVYVVLEICRRRSLL-ELHKRRKA---VTEPEARYFMRQTIQGVQYL 158
Query: 400 HASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCY 459
H + +IHRD+K N+ L+ + VK+ DFGL+ D GTP Y+ PE
Sbjct: 159 HNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXL-CGTPNYIAPEVLCKK 217
Query: 460 QLTDKSDVYSFGVVLIELISSMPAVD 485
+ + D++S G +L L+ P +
Sbjct: 218 GHSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 96/204 (47%), Gaps = 18/204 (8%)
Query: 288 KELGDGGFGTVYYGKLKD-GREVAVK----RLYDNNYRRV--EQFMNEVEILTRLRHKNL 340
+ELG G F V + K G + A K R ++ R V E EV IL ++H N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
++L + ++L+ E VA G + D L A+ LT + + + YLH
Sbjct: 77 ITLHEVYENKTD-VILIGELVAGGELFDFL----AEKESLTEEEATEFLKQILNGVYYLH 131
Query: 401 ASDIIHRDVKTNNI-LLDSNFC---VKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYH 456
+ I H D+K NI LLD N +K+ DFGL+ +D + GTP +V PE
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIFGTPEFVAPEIV 189
Query: 457 QCYQLTDKSDVYSFGVVLIELISS 480
L ++D++S GV+ L+S
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSG 213
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 89/206 (43%), Gaps = 10/206 (4%)
Query: 284 FSREKELGDGGFGTVYYGKLKDGREVAVKRLYDNNY----RRVEQFMNEVEILTRLRHKN 339
+ R + LG GGF Y D +EV ++ + + E+ E+ I L + +
Sbjct: 44 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPH 103
Query: 340 LVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYL 399
+V G + +V E ++ +LH R +T P +T + YL
Sbjct: 104 VVGFHGFFED-DDFVYVVLEICRRRSLL-ELHKRRKA---VTEPEARYFMRQTIQGVQYL 158
Query: 400 HASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCY 459
H + +IHRD+K N+ L+ + VK+ DFGL+ D GTP Y+ PE
Sbjct: 159 HNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDL-CGTPNYIAPEVLCKK 217
Query: 460 QLTDKSDVYSFGVVLIELISSMPAVD 485
+ + D++S G +L L+ P +
Sbjct: 218 GHSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 100/206 (48%), Gaps = 14/206 (6%)
Query: 281 TNDFSREKELGDGGFGTVYYGK-LKDGREVAVKRLYDN-NYRRVEQFMNEVEILTRLRH- 337
+D ELG G +G V + + G+ AVKR+ N + ++ + +++I R
Sbjct: 33 ADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDC 92
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHG-LLTWPIRMNIAIETASAL 396
V+ +G R +G + + + + T D+ + G + I IA+ AL
Sbjct: 93 PFTVTFYGALFR--EGDVWICXELXD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKAL 149
Query: 397 AYLHAS-DIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTA---PQGTPGYVD 452
+LH+ +IHRDVK +N+L+++ VK DFG+S DV A P P ++
Sbjct: 150 EHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGCKPYXAPERIN 209
Query: 453 PEYHQ-CYQLTDKSDVYSFGVVLIEL 477
PE +Q Y + KSD++S G+ IEL
Sbjct: 210 PELNQKGYSV--KSDIWSLGITXIEL 233
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 100/213 (46%), Gaps = 15/213 (7%)
Query: 284 FSREKELGDGGFGTVYY----GKLKDGREVAVKRLYDNNYR---RVEQFMNEVEILTRLR 336
F K LG G FG V+ + G A+K L + RV M E +IL +
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKM-ERDILADVN 88
Query: 337 HKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASAL 396
H +V L + L L+ +F+ G + +L +K + T E A L
Sbjct: 89 HPFVVKLHYAFQTEGK-LYLILDFLRGGDLFTRL----SKEVMFTEEDVKFYLAELALGL 143
Query: 397 AYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYH 456
+LH+ II+RD+K NILLD +K+ DFGLS+ +D + + GT Y+ PE
Sbjct: 144 DHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKE-AIDHEKKAYSFCGTVEYMAPEVV 202
Query: 457 QCYQLTDKSDVYSFGVVLIELIS-SMPAVDMNR 488
+ +D +S+GV++ E+++ S+P +R
Sbjct: 203 NRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDR 235
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 97/198 (48%), Gaps = 11/198 (5%)
Query: 288 KELGDGGFGTVY-YGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
+ELG G FG V+ + G A K + + E E++ ++ LRH LV+L
Sbjct: 163 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDA 222
Query: 347 TSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDIIH 406
++ ++++YEF++ G + +++ + H ++ + + L ++H ++ +H
Sbjct: 223 FEDDNE-MVMIYEFMSGGELFEKVADE---HNKMSEDEAVEYMRQVCKGLCHMHENNYVH 278
Query: 407 RDVKTNNILLDSNFC--VKVADFGLS-RLFPLDVTHVSTAPQGTPGYVDPEYHQCYQLTD 463
D+K NI+ + +K+ DFGL+ L P V+T GT + PE + +
Sbjct: 279 LDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEGKPVGY 335
Query: 464 KSDVYSFGVVLIELISSM 481
+D++S GV+ L+S +
Sbjct: 336 YTDMWSVGVLSYILLSGL 353
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 97/198 (48%), Gaps = 11/198 (5%)
Query: 288 KELGDGGFGTVY-YGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
+ELG G FG V+ + G A K + + E E++ ++ LRH LV+L
Sbjct: 57 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDA 116
Query: 347 TSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDIIH 406
++ ++++YEF++ G + +++ + H ++ + + L ++H ++ +H
Sbjct: 117 FEDDNE-MVMIYEFMSGGELFEKVADE---HNKMSEDEAVEYMRQVCKGLCHMHENNYVH 172
Query: 407 RDVKTNNILLDSNFC--VKVADFGLS-RLFPLDVTHVSTAPQGTPGYVDPEYHQCYQLTD 463
D+K NI+ + +K+ DFGL+ L P V+T GT + PE + +
Sbjct: 173 LDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEGKPVGY 229
Query: 464 KSDVYSFGVVLIELISSM 481
+D++S GV+ L+S +
Sbjct: 230 YTDMWSVGVLSYILLSGL 247
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 21/201 (10%)
Query: 288 KELGDGGFGTV--YYGKLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVSL 343
K +G G G V Y + D R VA+K+L N ++ E+ ++ + HKN++SL
Sbjct: 68 KPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL 126
Query: 344 FGC-----TSRYSQGLLLVYEFV-ANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
T Q + LV E + AN Q+ D + L + + +
Sbjct: 127 LNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLY--------QMLCGIK 178
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQ 457
+LH++ IIHRD+K +NI++ S+ +K+ DFGL+R + + T T Y PE
Sbjct: 179 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVIL 236
Query: 458 CYQLTDKSDVYSFGVVLIELI 478
+ D++S G ++ E++
Sbjct: 237 GMGYKENVDIWSVGCIMGEMV 257
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 35/208 (16%)
Query: 288 KELGDGGFGTV--YYGKLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVSL 343
K +G G G V Y + D R VA+K+L N ++ E+ ++ + HKN++SL
Sbjct: 68 KPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL 126
Query: 344 FGC-----TSRYSQGLLLVYEFV-ANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
T Q + LV E + AN Q+ D + L + + +
Sbjct: 127 LNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLY--------QMLCGIK 178
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSR-------LFPLDVTHVSTAPQGTPGY 450
+LH++ IIHRD+K +NI++ S+ +K+ DFGL+R + P VT AP+ G
Sbjct: 179 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG- 237
Query: 451 VDPEYHQCYQLTDKSDVYSFGVVLIELI 478
+ D++S G ++ E++
Sbjct: 238 --------MGYKENVDIWSVGCIMGEMV 257
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 35/208 (16%)
Query: 288 KELGDGGFGTV--YYGKLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVSL 343
K +G G G V Y + D R VA+K+L N ++ E+ ++ + HKN++SL
Sbjct: 30 KPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL 88
Query: 344 FGC-----TSRYSQGLLLVYEFV-ANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
T Q + LV E + AN Q+ D + L + + +
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLY--------QMLCGIK 140
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSR-------LFPLDVTHVSTAPQGTPGY 450
+LH++ IIHRD+K +NI++ S+ +K+ DFGL+R + P VT AP+ G
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG- 199
Query: 451 VDPEYHQCYQLTDKSDVYSFGVVLIELI 478
+ D++S G ++ E++
Sbjct: 200 --------MGYKENVDIWSVGCIMGEMV 219
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 35/208 (16%)
Query: 288 KELGDGGFGTV--YYGKLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVSL 343
K +G G G V Y + D R VA+K+L N ++ E+ ++ + HKN++SL
Sbjct: 29 KPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL 87
Query: 344 FGC-----TSRYSQGLLLVYEFV-ANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
T Q + LV E + AN Q+ D + L + + +
Sbjct: 88 LNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLY--------QMLCGIK 139
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSR-------LFPLDVTHVSTAPQGTPGY 450
+LH++ IIHRD+K +NI++ S+ +K+ DFGL+R + P VT AP+ G
Sbjct: 140 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG- 198
Query: 451 VDPEYHQCYQLTDKSDVYSFGVVLIELI 478
+ D++S G ++ E++
Sbjct: 199 --------MGYKENVDIWSVGCIMGEMV 218
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 90/202 (44%), Gaps = 11/202 (5%)
Query: 282 NDFSREKELGDGGFGTVYYGKLK-DGREVAVKRLYDN---NYRRVEQFMNEVEILTRLRH 337
N+F K LG G FG V K K GR A+K L V + E +L RH
Sbjct: 8 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 67
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
L +L + + L V E+ G + L +R + + E SAL
Sbjct: 68 PFLTALKYSFQTHDR-LCFVMEYANGGELFFHLSRER----VFSEDRARFYGAEIVSALD 122
Query: 398 YLHAS-DIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYH 456
YLH+ ++++RD+K N++LD + +K+ DFGL + D + GTP Y+ PE
Sbjct: 123 YLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFC-GTPEYLAPEVL 181
Query: 457 QCYQLTDKSDVYSFGVVLIELI 478
+ D + GVV+ E++
Sbjct: 182 EDNDYGRAVDWWGLGVVMYEMM 203
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 122/296 (41%), Gaps = 53/296 (17%)
Query: 280 ATNDFSREKELGDGGFGTVYYGKLK-DGREVAVKRLYDN-NYRRVEQFMNEVEILTRLRH 337
D E+G G +G+V K G+ +AVKR+ + + +Q + +++++ R
Sbjct: 20 TAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSD 79
Query: 338 -KNLVSLFG----------CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRM 386
+V +G C S Y++V +V D + + I
Sbjct: 80 CPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVY--SVLDDVIPEE---------ILG 128
Query: 387 NIAIETASALAYLHAS-DIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTA-- 443
I + T AL +L + IIHRD+K +NILLD + +K+ DFG+S + A
Sbjct: 129 KITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGC 188
Query: 444 -PQGTPGYVDPEY-HQCYQLTDKSDVYSFGVVLIELISS-MPAVDMNRHRHEINLANLAI 500
P P +DP Q Y + +SDV+S G+ L EL + P N
Sbjct: 189 RPYMAPERIDPSASRQGYDV--RSDVWSLGITLYELATGRFPYPKWN------------- 233
Query: 501 NKIQKCAFDELIDPCLGFE---SDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVL 553
FD+L G S+ E + + S LCL +++ RP +E+L
Sbjct: 234 -----SVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELL 284
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 35/208 (16%)
Query: 288 KELGDGGFGTV--YYGKLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVSL 343
K +G G G V Y + D R VA+K+L N ++ E+ ++ + HKN++SL
Sbjct: 31 KPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL 89
Query: 344 FGC-----TSRYSQGLLLVYEFV-ANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
T Q + LV E + AN Q+ D + L + + +
Sbjct: 90 LNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLY--------QMLCGIK 141
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSR-------LFPLDVTHVSTAPQGTPGY 450
+LH++ IIHRD+K +NI++ S+ +K+ DFGL+R + P VT AP+ G
Sbjct: 142 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG- 200
Query: 451 VDPEYHQCYQLTDKSDVYSFGVVLIELI 478
+ D++S G ++ E++
Sbjct: 201 --------MGYKENVDIWSVGCIMGEMV 220
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 90/202 (44%), Gaps = 11/202 (5%)
Query: 282 NDFSREKELGDGGFGTVYYGKLK-DGREVAVKRLYDN---NYRRVEQFMNEVEILTRLRH 337
N+F K LG G FG V K K GR A+K L V + E +L RH
Sbjct: 10 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 69
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
L +L + + L V E+ G + L +R + + E SAL
Sbjct: 70 PFLTALKYSFQTHDR-LCFVMEYANGGELFFHLSRER----VFSEDRARFYGAEIVSALD 124
Query: 398 YLHAS-DIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYH 456
YLH+ ++++RD+K N++LD + +K+ DFGL + D + GTP Y+ PE
Sbjct: 125 YLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFC-GTPEYLAPEVL 183
Query: 457 QCYQLTDKSDVYSFGVVLIELI 478
+ D + GVV+ E++
Sbjct: 184 EDNDYGRAVDWWGLGVVMYEMM 205
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 93/212 (43%), Gaps = 19/212 (8%)
Query: 286 REKELGDGGFGTVYYG-KLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLF 344
+E LG+G V L +E AVK + + EVE+L + + V
Sbjct: 17 QEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLEL 76
Query: 345 GCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDI 404
LV+E + G++ +H R + L + ++A SAL +LH I
Sbjct: 77 IEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVA----SALDFLHNKGI 132
Query: 405 IHRDVKTNNILLD---SNFCVKVADFGLSRLFPL--DVTHVST----APQGTPGYVDPEY 455
HRD+K NIL + VK+ DFGL L D + +ST P G+ Y+ PE
Sbjct: 133 AHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEV 192
Query: 456 HQCY----QLTDKS-DVYSFGVVLIELISSMP 482
+ + + DK D++S GV+L L+S P
Sbjct: 193 VEAFSEEASIYDKRCDLWSLGVILYILLSGYP 224
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 13/205 (6%)
Query: 282 NDFSREKELGDGGFGTVYYGKLK-DGREVAVKRLYDNNYRRVE---QFMNEVEILTRLRH 337
N F + + LG GGFG V +++ G+ A K+L ++ + +NE +IL ++
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS 243
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNI--AIETASA 395
+ +VSL L LV + G + ++ G +P + A E
Sbjct: 244 RFVVSL-AYAYETKDALCLVLTLMNGGDLKFHIY----HMGQAGFPEARAVFYAAEICCG 298
Query: 396 LAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEY 455
L LH I++RD+K NILLD + ++++D GL+ P T GT GY+ PE
Sbjct: 299 LEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRV--GTVGYMAPEV 356
Query: 456 HQCYQLTDKSDVYSFGVVLIELISS 480
+ + T D ++ G +L E+I+
Sbjct: 357 VKNERYTFSPDWWALGCLLYEMIAG 381
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 35/208 (16%)
Query: 288 KELGDGGFGTV--YYGKLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVSL 343
K +G G G V Y + D R VA+K+L N ++ E+ ++ + HKN++SL
Sbjct: 30 KPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL 88
Query: 344 FGC-----TSRYSQGLLLVYEFV-ANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
T Q + LV E + AN Q+ D + L + + +
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLY--------QMLCGIK 140
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSR-------LFPLDVTHVSTAPQGTPGY 450
+LH++ IIHRD+K +NI++ S+ +K+ DFGL+R + P VT AP+ G
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG- 199
Query: 451 VDPEYHQCYQLTDKSDVYSFGVVLIELI 478
+ D++S G ++ E++
Sbjct: 200 --------MGYKENVDIWSVGCIMGEMV 219
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 21/201 (10%)
Query: 288 KELGDGGFGTV--YYGKLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVSL 343
K +G G G V Y + D R VA+K+L N ++ E+ ++ + HKN++SL
Sbjct: 31 KPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL 89
Query: 344 FGC-----TSRYSQGLLLVYEFV-ANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
T Q + LV E + AN Q+ D + L + + +
Sbjct: 90 LNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLY--------QMLCGIK 141
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQ 457
+LH++ IIHRD+K +NI++ S+ +K+ DFGL+R + + T T Y PE
Sbjct: 142 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVIL 199
Query: 458 CYQLTDKSDVYSFGVVLIELI 478
+ D++S G ++ E++
Sbjct: 200 GMGYKENVDIWSVGCIMGEMV 220
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 90/202 (44%), Gaps = 11/202 (5%)
Query: 282 NDFSREKELGDGGFGTVYYGKLK-DGREVAVKRLYDN---NYRRVEQFMNEVEILTRLRH 337
N+F K LG G FG V K K GR A+K L V + E +L RH
Sbjct: 9 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 68
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
L +L + + L V E+ G + L +R + + E SAL
Sbjct: 69 PFLTALKYSFQTHDR-LCFVMEYANGGELFFHLSRER----VFSEDRARFYGAEIVSALD 123
Query: 398 YLHAS-DIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYH 456
YLH+ ++++RD+K N++LD + +K+ DFGL + D + GTP Y+ PE
Sbjct: 124 YLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFC-GTPEYLAPEVL 182
Query: 457 QCYQLTDKSDVYSFGVVLIELI 478
+ D + GVV+ E++
Sbjct: 183 EDNDYGRAVDWWGLGVVMYEMM 204
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 35/208 (16%)
Query: 288 KELGDGGFGTV--YYGKLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVSL 343
K +G G G V Y + D R VA+K+L N ++ E+ ++ + HKN++SL
Sbjct: 24 KPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL 82
Query: 344 FGC-----TSRYSQGLLLVYEFV-ANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
T Q + LV E + AN Q+ D + L + + +
Sbjct: 83 LNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLY--------QMLCGIK 134
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSR-------LFPLDVTHVSTAPQGTPGY 450
+LH++ IIHRD+K +NI++ S+ +K+ DFGL+R + P VT AP+ G
Sbjct: 135 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG- 193
Query: 451 VDPEYHQCYQLTDKSDVYSFGVVLIELI 478
+ D++S G ++ E++
Sbjct: 194 --------MGYKENVDIWSVGCIMGEMV 213
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 35/208 (16%)
Query: 288 KELGDGGFGTV--YYGKLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVSL 343
K +G G G V Y + D R VA+K+L N ++ E+ ++ + HKN++SL
Sbjct: 23 KPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL 81
Query: 344 FGC-----TSRYSQGLLLVYEFV-ANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
T Q + LV E + AN Q+ D + L + + +
Sbjct: 82 LNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLY--------QMLCGIK 133
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSR-------LFPLDVTHVSTAPQGTPGY 450
+LH++ IIHRD+K +NI++ S+ +K+ DFGL+R + P VT AP+ G
Sbjct: 134 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG- 192
Query: 451 VDPEYHQCYQLTDKSDVYSFGVVLIELI 478
+ D++S G ++ E++
Sbjct: 193 --------MGYKENVDIWSVGCIMGEMV 212
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 14/211 (6%)
Query: 280 ATNDFSREKELGDGGFGTVYYGKLKDGREV----AVKRLYD----NNYRRVEQFMNEVEI 331
+F K LG G +G V+ + G + A+K L + E E ++
Sbjct: 52 GIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQV 111
Query: 332 LTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIE 391
L +R + + L L+ +++ G + L + +++ + E
Sbjct: 112 LEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHL---SQRERFTEHEVQIYVG-E 167
Query: 392 TASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYV 451
AL +LH II+RD+K NILLDSN V + DFGLS+ F D T + GT Y+
Sbjct: 168 IVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYM 227
Query: 452 DPEYHQCYQLT-DKS-DVYSFGVVLIELISS 480
P+ + DK+ D +S GV++ EL++
Sbjct: 228 APDIVRGGDSGHDKAVDWWSLGVLMYELLTG 258
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 98/205 (47%), Gaps = 12/205 (5%)
Query: 288 KELGDGGFGTVYYGKLKD-GREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
K LG GG G V+ D + VA+K++ + + V+ + E++I+ RL H N+V +F
Sbjct: 17 KPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEI 76
Query: 347 T----SRYSQGLLLVYEFVANGTVADQLHGDRA---KHGLLTWPIRMNIAIETASALAYL 399
S+ + + + E + V + + D A + G L + L Y+
Sbjct: 77 LGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARLFMYQLLRGLKYI 136
Query: 400 HASDIIHRDVKTNNILLDS-NFCVKVADFGLSRLFPLDVTHVSTAPQG--TPGYVDPEYH 456
H+++++HRD+K N+ +++ + +K+ DFGL+R+ +H +G T Y P
Sbjct: 137 HSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLL 196
Query: 457 QC-YQLTDKSDVYSFGVVLIELISS 480
T D+++ G + E+++
Sbjct: 197 LSPNNYTKAIDMWAAGCIFAEMLTG 221
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 35/208 (16%)
Query: 288 KELGDGGFGTV--YYGKLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVSL 343
K +G G G V Y + D R VA+K+L N ++ E+ ++ + HKN++SL
Sbjct: 24 KPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL 82
Query: 344 FGC-----TSRYSQGLLLVYEFV-ANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALA 397
T Q + LV E + AN Q+ D + L + + +
Sbjct: 83 LNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLY--------QMLCGIK 134
Query: 398 YLHASDIIHRDVKTNNILLDSNFCVKVADFGLSR-------LFPLDVTHVSTAPQGTPGY 450
+LH++ IIHRD+K +NI++ S+ +K+ DFGL+R + P VT AP+ G
Sbjct: 135 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG- 193
Query: 451 VDPEYHQCYQLTDKSDVYSFGVVLIELI 478
+ D++S G ++ E++
Sbjct: 194 --------MGYKENVDIWSVGCIMGEMV 213
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 13/205 (6%)
Query: 282 NDFSREKELGDGGFGTVYYGKLK-DGREVAVKRLYDNNYRRVE---QFMNEVEILTRLRH 337
N F + + LG GGFG V +++ G+ A K+L ++ + +NE +IL ++
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS 243
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNI--AIETASA 395
+ +VSL L LV + G + ++ G +P + A E
Sbjct: 244 RFVVSL-AYAYETKDALCLVLTLMNGGDLKFHIY----HMGQAGFPEARAVFYAAEICCG 298
Query: 396 LAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEY 455
L LH I++RD+K NILLD + ++++D GL+ P T GT GY+ PE
Sbjct: 299 LEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRV--GTVGYMAPEV 356
Query: 456 HQCYQLTDKSDVYSFGVVLIELISS 480
+ + T D ++ G +L E+I+
Sbjct: 357 VKNERYTFSPDWWALGCLLYEMIAG 381
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 95/221 (42%), Gaps = 17/221 (7%)
Query: 269 VPIFSYSDLAEATNDFSREKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNE 328
+PI SD E K++G G FG + K E+ + + + E E
Sbjct: 11 LPIMHDSDRYELV------KDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKRE 64
Query: 329 VEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNI 388
+ LRH N+V F L +V E+ + G + +++ G +
Sbjct: 65 IINHRSLRHPNIVR-FKEVILTPTHLAIVMEYASGGELFERI----CNAGRFSEDEARFF 119
Query: 389 AIETASALAYLHASDIIHRDVKTNNILLDSNFC--VKVADFGLSRLFPLDVTHVSTAPQG 446
+ S ++Y HA + HRD+K N LLD + +K+ DFG S+ L ST G
Sbjct: 120 FQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV--G 177
Query: 447 TPGYVDPEYHQCYQLTDK-SDVYSFGVVL-IELISSMPAVD 485
TP Y+ PE + K +DV+S GV L + L+ + P D
Sbjct: 178 TPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFED 218
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 110/229 (48%), Gaps = 27/229 (11%)
Query: 288 KELGDGGFGTVYYGKLKD-GREVAVKRLYDNNYRRVE----QFMNEVEILTRL----RHK 338
KELG G F V K G+E A K L RR + + ++E+ +L R
Sbjct: 35 KELGRGKFAVVRQCISKSTGQEYAAKFL--KKRRRGQDCRAEILHEIAVLELAKSCPRVI 92
Query: 339 NLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAY 398
NL ++ TS ++L+ E+ A G + + A+ +++ + + + + Y
Sbjct: 93 NLHEVYENTSE----IILILEYAAGGEIFSLCLPELAE--MVSENDVIRLIKQILEGVYY 146
Query: 399 LHASDIIHRDVKTNNILLDSNFC---VKVADFGLSRLFPLDVTHVSTAPQ--GTPGYVDP 453
LH ++I+H D+K NILL S + +K+ DFG+SR + H + GTP Y+ P
Sbjct: 147 LHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSR----KIGHACELREIMGTPEYLAP 202
Query: 454 EYHQCYQLTDKSDVYSFGVVLIELIS-SMPAVDMNRHRHEINLANLAIN 501
E +T +D+++ G++ L++ + P V + +N++ + ++
Sbjct: 203 EILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVD 251
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 106/217 (48%), Gaps = 21/217 (9%)
Query: 290 LGDGGFGTV--YYGKLKDGREVAVKRLYDNNYRRV-EQFMNEVEILTRLRHKNLVSLFGC 346
+G+G +G V Y + R VA+K++ ++ ++ + E++IL RH+N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVR-VAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDI 91
Query: 347 TSRYS-QGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAI-----ETASALAYLH 400
+ + + VY V D + D K LL N I + L Y+H
Sbjct: 92 IRAPTIEQMKDVY------IVQDLMETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIH 143
Query: 401 ASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVS--TAPQGTPGYVDPEYHQC 458
+++++HRD+K +N+LL++ +K+ DFGL+R+ D H T T Y PE
Sbjct: 144 SANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 203
Query: 459 YQLTDKS-DVYSFGVVLIELISSMPAVDMNRHRHEIN 494
+ KS D++S G +L E++S+ P + ++N
Sbjct: 204 SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 240
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 73/165 (44%), Gaps = 19/165 (11%)
Query: 327 NEVEILTRLRHKNLVSLFGCT-SRYSQGLLLVYEFVANGT--VADQLHGDR----AKHGL 379
E+++L RLRHKN++ L + Q + +V E+ G + D + R HG
Sbjct: 55 KEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGY 114
Query: 380 LTWPIRMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSR-LFPLDVT 438
+ L YLH+ I+H+D+K N+LL + +K++ G++ L P
Sbjct: 115 FC---------QLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAAD 165
Query: 439 HVSTAPQGTPGYVDPEYHQCYQLTD--KSDVYSFGVVLIELISSM 481
QG+P + PE K D++S GV L + + +
Sbjct: 166 DTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGL 210
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 104/216 (48%), Gaps = 19/216 (8%)
Query: 290 LGDGGFGTV--YYGKLKDGREVAVKRLYDNNYRRV-EQFMNEVEILTRLRHKNLVSLFGC 346
+G+G +G V Y + R VA+K++ ++ ++ + E++IL RH+N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVR-VAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDI 91
Query: 347 TSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAI-----ETASALAYLHA 401
+ + + V D + D K LL N I + L Y+H+
Sbjct: 92 IRAPT-----IEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIHS 144
Query: 402 SDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVS--TAPQGTPGYVDPEYHQCY 459
++++HRD+K +N+LL++ +K+ DFGL+R+ D H T T Y PE
Sbjct: 145 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 204
Query: 460 QLTDKS-DVYSFGVVLIELISSMPAVDMNRHRHEIN 494
+ KS D++S G +L E++S+ P + ++N
Sbjct: 205 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 240
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 95/212 (44%), Gaps = 27/212 (12%)
Query: 283 DFSREKELGDGGFGTVYYGKLKDGREVAVKRLYDN--NYRRVEQ--FMNEVEILTRLRHK 338
DF K +G G FG V K+K+ + ++ + +R E F E ++L +
Sbjct: 75 DFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQ 134
Query: 339 NLVSLFGCTSRYSQGLLLVYEFVANGTV-------ADQLHGDRAKHGLLTWPIRMNIAIE 391
+ +L + L LV ++ G + D+L D A+ + M +AI+
Sbjct: 135 WITALHYAFQDENH-LYLVMDYYVGGDLLTLLSKFEDKLPEDMARF----YIGEMVLAID 189
Query: 392 TASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYV 451
+ L Y +HRD+K +N+LLD N +++ADFG D T S+ GTP Y+
Sbjct: 190 SIHQLHY------VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYI 243
Query: 452 DPEYHQCYQ-----LTDKSDVYSFGVVLIELI 478
PE Q + + D +S GV + E++
Sbjct: 244 SPEILQAMEDGMGKYGPECDWWSLGVCMYEML 275
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 100/209 (47%), Gaps = 37/209 (17%)
Query: 288 KELGDGGFGTV---YYGKLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVS 342
K +G G G V Y L+ R VA+K+L N ++ E+ ++ + HKN++
Sbjct: 30 KPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIG 87
Query: 343 LFGC-TSRYS----QGLLLVYEFV-ANGTVADQLHGDRAKHGLLTWPIRMNIAIETASAL 396
L T + S Q + +V E + AN + Q+ D + L + + + I
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIK------- 140
Query: 397 AYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSR-------LFPLDVTHVSTAPQGTPG 449
+LH++ IIHRD+K +NI++ S+ +K+ DFGL+R + P VT AP+ G
Sbjct: 141 -HLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 450 YVDPEYHQCYQLTDKSDVYSFGVVLIELI 478
Y+ + D++S G ++ E+I
Sbjct: 200 -------MGYK--ENVDIWSVGCIMGEMI 219
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 79/167 (47%), Gaps = 14/167 (8%)
Query: 323 EQFMNEVEILTRLR-HKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLT 381
E + EV+IL ++ H N++ L T + LV++ + G + D L T
Sbjct: 68 EATLKEVDILRKVSGHPNIIQL-KDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKET 126
Query: 382 WPIRMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVS 441
I M +E AL H +I+HRD+K NILLD + +K+ DFG S LD
Sbjct: 127 RKI-MRALLEVICAL---HKLNIVHRDLKPENILLDDDMNIKLTDFGFS--CQLDPGEKL 180
Query: 442 TAPQGTPGYVDPEYHQCYQ------LTDKSDVYSFGVVLIELISSMP 482
+ GTP Y+ PE +C + D++S GV++ L++ P
Sbjct: 181 RSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSP 227
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 92/203 (45%), Gaps = 18/203 (8%)
Query: 288 KELGDGGFGTVYYGKLKD-GREVAVKRLYDNNYRRV------EQFMNEVEILTRLRHKNL 340
+ELG G F V + K G E A K + R E+ EV IL ++ H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNI 77
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
++L + ++L+ E V+ G + D L A+ L+ + + + YLH
Sbjct: 78 ITLHDVYENRTD-VVLILELVSGGELFDFL----AQKESLSEEEATSFIKQILDGVNYLH 132
Query: 401 ASDIIHRDVKTNNI-LLDSNF---CVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYH 456
I H D+K NI LLD N +K+ DFGL+ V + GTP +V PE
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF--GTPEFVAPEIV 190
Query: 457 QCYQLTDKSDVYSFGVVLIELIS 479
L ++D++S GV+ L+S
Sbjct: 191 NYEPLGLEADMWSIGVITYILLS 213
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 97/216 (44%), Gaps = 14/216 (6%)
Query: 272 FSYSDLAEATNDFSREKELGDGGFGTVYYGKLKDGR-EVAVKRLYDNNYRRVEQFMNEVE 330
F S + ++ E +G G +G V K R A K++ V++F E+E
Sbjct: 16 FQGSTKGDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIE 75
Query: 331 ILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAI 390
I+ L H N++ L+ T + + LV E G + +++ R + I
Sbjct: 76 IMKSLDHPNIIRLYE-TFEDNTDIYLVMELCTGGELFERVVHKR----VFRESDAARIMK 130
Query: 391 ETASALAYLHASDIIHRDVKTNNILL--DS-NFCVKVADFGL-SRLFPLDVTHVSTAPQG 446
+ SA+AY H ++ HRD+K N L DS + +K+ DFGL +R P + G
Sbjct: 131 DVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKV---G 187
Query: 447 TPGYVDPEYHQCYQLTDKSDVYSFGVVLIELISSMP 482
TP YV P+ + + D +S GV++ L+ P
Sbjct: 188 TPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYP 222
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 93/207 (44%), Gaps = 14/207 (6%)
Query: 282 NDFSREKELGDGGFGTVYYGKL-KDGREVAVKRLY-DNNYRRVEQFMNEVEILTRLRHKN 339
ND E+G G G V+ + K G +AVK++ N ++ + +++++ L+ +
Sbjct: 25 NDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVV--LKSHD 82
Query: 340 LVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYL 399
+ C + + GT A++L + G + I + + AL YL
Sbjct: 83 CPYIVQCFGTFITNTDVFIAMELMGTCAEKLK--KRMQGPIPERILGKMTVAIVKALYYL 140
Query: 400 HAS-DIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQC 458
+IHRDVK +NILLD +K+ DFG+S D +A G Y+ PE
Sbjct: 141 KEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSA--GCAAYMAPERIDP 198
Query: 459 YQLTD-----KSDVYSFGVVLIELISS 480
T ++DV+S G+ L+EL +
Sbjct: 199 PDPTKPDYDIRADVWSLGISLVELATG 225
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 86/186 (46%), Gaps = 17/186 (9%)
Query: 323 EQFMNEVEILTRLR-HKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLT 381
E + EV+IL ++ H N++ L T + LV++ + G + D L T
Sbjct: 55 EATLKEVDILRKVSGHPNIIQL-KDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKET 113
Query: 382 WPIRMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVS 441
I M +E AL H +I+HRD+K NILLD + +K+ DFG S LD
Sbjct: 114 RKI-MRALLEVICAL---HKLNIVHRDLKPENILLDDDMNIKLTDFGFS--CQLDPGEKL 167
Query: 442 TAPQGTPGYVDPEYHQCYQ------LTDKSDVYSFGVVLIELISSMPAVDMNRHRHEINL 495
GTP Y+ PE +C + D++S GV++ L++ P HR ++ +
Sbjct: 168 REVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF---WHRKQMLM 224
Query: 496 ANLAIN 501
+ ++
Sbjct: 225 LRMIMS 230
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 94/221 (42%), Gaps = 17/221 (7%)
Query: 269 VPIFSYSDLAEATNDFSREKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNE 328
+PI SD E K++G G FG + K E+ + + + E
Sbjct: 12 LPIMHDSDRYELV------KDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKRE 65
Query: 329 VEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNI 388
+ LRH N+V F L +V E+ + G + +++ G +
Sbjct: 66 IINHRSLRHPNIVR-FKEVILTPTHLAIVMEYASGGELFERI----CNAGRFSEDEARFF 120
Query: 389 AIETASALAYLHASDIIHRDVKTNNILLDSNFC--VKVADFGLSRLFPLDVTHVSTAPQG 446
+ S ++Y HA + HRD+K N LLD + +K+ DFG S+ L ST G
Sbjct: 121 FQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV--G 178
Query: 447 TPGYVDPEYHQCYQLTDK-SDVYSFGVVL-IELISSMPAVD 485
TP Y+ PE + K +DV+S GV L + L+ + P D
Sbjct: 179 TPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFED 219
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 95/212 (44%), Gaps = 27/212 (12%)
Query: 283 DFSREKELGDGGFGTVYYGKLKDGREVAVKRLYDN--NYRRVEQ--FMNEVEILTRLRHK 338
DF K +G G FG V K+K+ + ++ + +R E F E ++L +
Sbjct: 91 DFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQ 150
Query: 339 NLVSLFGCTSRYSQGLLLVYEFVANGTV-------ADQLHGDRAKHGLLTWPIRMNIAIE 391
+ +L + L LV ++ G + D+L D A+ + M +AI+
Sbjct: 151 WITALHYAFQDENH-LYLVMDYYVGGDLLTLLSKFEDKLPEDMARF----YIGEMVLAID 205
Query: 392 TASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYV 451
+ L Y +HRD+K +N+LLD N +++ADFG D T S+ GTP Y+
Sbjct: 206 SIHQLHY------VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYI 259
Query: 452 DPEYHQCYQ-----LTDKSDVYSFGVVLIELI 478
PE Q + + D +S GV + E++
Sbjct: 260 SPEILQAMEDGMGKYGPECDWWSLGVCMYEML 291
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 14/204 (6%)
Query: 284 FSREKELGDGGFGTVYYGKLKDGR-EVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVS 342
++ E +G G +G V K R A K++ V++F E+EI+ L H N++
Sbjct: 11 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIR 70
Query: 343 LFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHAS 402
L+ T + + LV E G + +++ R + I + SA+AY H
Sbjct: 71 LYE-TFEDNTDIYLVMELCTGGELFERVVHKR----VFRESDAARIMKDVLSAVAYCHKL 125
Query: 403 DIIHRDVKTNNILL--DS-NFCVKVADFGL-SRLFPLDVTHVSTAPQGTPGYVDPEYHQC 458
++ HRD+K N L DS + +K+ DFGL +R P + GTP YV P+ +
Sbjct: 126 NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKV---GTPYYVSPQVLEG 182
Query: 459 YQLTDKSDVYSFGVVLIELISSMP 482
+ D +S GV++ L+ P
Sbjct: 183 L-YGPECDEWSAGVMMYVLLCGYP 205
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 92/174 (52%), Gaps = 18/174 (10%)
Query: 308 EVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVA 367
++++K YD+ F NE++I+T ++++ ++ G + Y + + ++YE++ N ++
Sbjct: 80 KISIKSKYDD-------FKNELQIITDIKNEYCLTCEGIITNYDE-VYIIYEYMENDSIL 131
Query: 368 --DQLHGDRAKHGLLTWPIRMN--IAIETASALAYLH-ASDIIHRDVKTNNILLDSNFCV 422
D+ K+ PI++ I ++ +Y+H +I HRDVK +NIL+D N V
Sbjct: 132 KFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRV 191
Query: 423 KVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEY--HQCYQLTDKSDVYSFGVVL 474
K++DFG S V +GT ++ PE+ ++ K D++S G+ L
Sbjct: 192 KLSDFGESEYM---VDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICL 242
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 87/207 (42%), Gaps = 18/207 (8%)
Query: 282 NDFSREKELGDGGFGTVYYGKLK-DGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNL 340
F R LG G +G V+ + K DGR AVKR + +R + + L +
Sbjct: 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSM-SPFRGPK---DRARKLAEVGSHEK 112
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAI------ETAS 394
V C R Q +E + +L G + W + A +T
Sbjct: 113 VGQHPCCVRLEQ----AWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLL 168
Query: 395 ALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPE 454
ALA+LH+ ++H DVK NI L K+ DFGL L L +G P Y+ PE
Sbjct: 169 ALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGL--LVELGTAGAGEVQEGDPRYMAPE 226
Query: 455 YHQCYQLTDKSDVYSFGVVLIELISSM 481
Q T +DV+S G+ ++E+ +M
Sbjct: 227 LLQGSYGT-AADVFSLGLTILEVACNM 252
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 92/203 (45%), Gaps = 18/203 (8%)
Query: 288 KELGDGGFGTVYYGKLKD-GREVAVKRLYDNNYRRV------EQFMNEVEILTRLRHKNL 340
+ELG G F V + K G E A K + R E+ EV IL ++ H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
++L + ++L+ E V+ G + D L A+ L+ + + + YLH
Sbjct: 78 ITLHDVYENRTD-VVLILELVSGGELFDFL----AQKESLSEEEATSFIKQILDGVNYLH 132
Query: 401 ASDIIHRDVKTNNI-LLDSNF---CVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYH 456
I H D+K NI LLD N +K+ DFGL+ V + GTP +V PE
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF--GTPEFVAPEIV 190
Query: 457 QCYQLTDKSDVYSFGVVLIELIS 479
L ++D++S GV+ L+S
Sbjct: 191 NYEPLGLEADMWSIGVITYILLS 213
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 92/203 (45%), Gaps = 18/203 (8%)
Query: 288 KELGDGGFGTVYYGKLKD-GREVAVKRLYDNNYRRV------EQFMNEVEILTRLRHKNL 340
+ELG G F V + K G E A K + R E+ EV IL ++ H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
++L + ++L+ E V+ G + D L A+ L+ + + + YLH
Sbjct: 78 ITLHDVYENRTD-VVLILELVSGGELFDFL----AQKESLSEEEATSFIKQILDGVNYLH 132
Query: 401 ASDIIHRDVKTNNI-LLDSNF---CVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYH 456
I H D+K NI LLD N +K+ DFGL+ V + GTP +V PE
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF--GTPEFVAPEIV 190
Query: 457 QCYQLTDKSDVYSFGVVLIELIS 479
L ++D++S GV+ L+S
Sbjct: 191 NYEPLGLEADMWSIGVITYILLS 213
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 92/203 (45%), Gaps = 18/203 (8%)
Query: 288 KELGDGGFGTVYYGKLKD-GREVAVKRLYDNNYRRV------EQFMNEVEILTRLRHKNL 340
+ELG G F V + K G E A K + R E+ EV IL ++ H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
++L + ++L+ E V+ G + D L A+ L+ + + + YLH
Sbjct: 78 ITLHDVYENRTD-VVLILELVSGGELFDFL----AQKESLSEEEATSFIKQILDGVNYLH 132
Query: 401 ASDIIHRDVKTNNI-LLDSNF---CVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYH 456
I H D+K NI LLD N +K+ DFGL+ V + GTP +V PE
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF--GTPEFVAPEIV 190
Query: 457 QCYQLTDKSDVYSFGVVLIELIS 479
L ++D++S GV+ L+S
Sbjct: 191 NYEPLGLEADMWSIGVITYILLS 213
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 92/203 (45%), Gaps = 18/203 (8%)
Query: 288 KELGDGGFGTVYYGKLKD-GREVAVKRLYDNNYRRV------EQFMNEVEILTRLRHKNL 340
+ELG G F V + K G E A K + R E+ EV IL ++ H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
++L + ++L+ E V+ G + D L A+ L+ + + + YLH
Sbjct: 78 ITLHDVYENRTD-VVLILELVSGGELFDFL----AQKESLSEEEATSFIKQILDGVNYLH 132
Query: 401 ASDIIHRDVKTNNI-LLDSNF---CVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYH 456
I H D+K NI LLD N +K+ DFGL+ V + GTP +V PE
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF--GTPEFVAPEIV 190
Query: 457 QCYQLTDKSDVYSFGVVLIELIS 479
L ++D++S GV+ L+S
Sbjct: 191 NYEPLGLEADMWSIGVITYILLS 213
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 78/167 (46%), Gaps = 14/167 (8%)
Query: 323 EQFMNEVEILTRLR-HKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLT 381
E + EV+IL ++ H N++ L T + LV++ + G + D L T
Sbjct: 68 EATLKEVDILRKVSGHPNIIQL-KDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKET 126
Query: 382 WPIRMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVS 441
I M +E AL H +I+HRD+K NILLD + +K+ DFG S LD
Sbjct: 127 RKI-MRALLEVICAL---HKLNIVHRDLKPENILLDDDMNIKLTDFGFS--CQLDPGEKL 180
Query: 442 TAPQGTPGYVDPEYHQCYQ------LTDKSDVYSFGVVLIELISSMP 482
GTP Y+ PE +C + D++S GV++ L++ P
Sbjct: 181 REVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSP 227
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 99/209 (47%), Gaps = 37/209 (17%)
Query: 288 KELGDGGFGTV---YYGKLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVS 342
K +G G G V Y L+ R VA+K+L N ++ E+ ++ + HKN++
Sbjct: 30 KPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIG 87
Query: 343 LFGC-TSRYS----QGLLLVYEFV-ANGTVADQLHGDRAKHGLLTWPIRMNIAIETASAL 396
L T + S Q + +V E + AN + Q+ D + L + + +
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLY--------QMLCGI 139
Query: 397 AYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSR-------LFPLDVTHVSTAPQGTPG 449
+LH++ IIHRD+K +NI++ S+ +K+ DFGL+R + P VT AP+ G
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 450 YVDPEYHQCYQLTDKSDVYSFGVVLIELI 478
Y+ + D++S G ++ E+I
Sbjct: 200 -------MGYK--ENVDIWSVGCIMGEMI 219
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 71/151 (47%), Gaps = 27/151 (17%)
Query: 290 LGDGGFGTVYYGKLKDGREVAVKRLYD---NNYRRVEQFMNEVEILTRLRHKNLVSLFG- 345
+G G FG VY+G+ EVA+ RL D +N +++ F EV + RH+N+V G
Sbjct: 41 IGKGRFGQVYHGRWHG--EVAI-RLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGA 97
Query: 346 CTSRYSQGLLL-------VYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAY 398
C S ++ +Y V + + ++ R IA E + Y
Sbjct: 98 CMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTR------------QIAQEIVKGMGY 145
Query: 399 LHASDIIHRDVKTNNILLDSNFCVKVADFGL 429
LHA I+H+D+K+ N+ D N V + DFGL
Sbjct: 146 LHAKGILHKDLKSKNVFYD-NGKVVITDFGL 175
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 92/204 (45%), Gaps = 18/204 (8%)
Query: 288 KELGDGGFGTVYYGKLKD-GREVAVKRLYDNNYRRV------EQFMNEVEILTRLRHKNL 340
+ELG G F V + K G E A K + R E+ EV IL ++ H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
++L + ++L+ E V+ G + D L A+ L+ + + + YLH
Sbjct: 78 ITLHDVYENRTD-VVLILELVSGGELFDFL----AQKESLSEEEATSFIKQILDGVNYLH 132
Query: 401 ASDIIHRDVKTNNI-LLDSNF---CVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYH 456
I H D+K NI LLD N +K+ DFGL+ V + GTP +V PE
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF--GTPEFVAPEIV 190
Query: 457 QCYQLTDKSDVYSFGVVLIELISS 480
L ++D++S GV+ L+S
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSG 214
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 103/239 (43%), Gaps = 19/239 (7%)
Query: 256 ERTDLETGTVYFGVPIFSYSDLAEATNDFSREKELGDGGFGTVYYGKLKDGREVAVKRLY 315
+R + TG + +PI SD DF K++G G FG + K +E+ +
Sbjct: 2 DRAPVTTGPL--DMPIMHDSD----RYDFV--KDIGSGNFGVARLMRDKLTKELVAVKYI 53
Query: 316 DNNYRRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRA 375
+ E E+ LRH N+V F L ++ E+ + G + +++
Sbjct: 54 ERGAAIDENVQREIINHRSLRHPNIVR-FKEVILTPTHLAIIMEYASGGELYERI----C 108
Query: 376 KHGLLTWPIRMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFC--VKVADFGLSRLF 433
G + + S ++Y H+ I HRD+K N LLD + +K+ DFG S+
Sbjct: 109 NAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSS 168
Query: 434 PLDVTHVSTAPQGTPGYVDPEYHQCYQLTDK-SDVYSFGVVL-IELISSMPAVDMNRHR 490
L ST GTP Y+ PE + K +DV+S GV L + L+ + P D R
Sbjct: 169 VLHSQPKSTV--GTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPR 225
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 91/203 (44%), Gaps = 24/203 (11%)
Query: 290 LGDGGFGTVYYGKLKDGREVAVKRLYDNN--YRRVEQFMNEVEILTRLRHKNLVSLFG-- 345
LG G V+ G+ K ++ ++++N R V+ M E E+L +L HKN+V LF
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIE 76
Query: 346 --CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASD 403
T+R+ +L+ EF G++ L +GL + + + + +L +
Sbjct: 77 EETTTRHK---VLIMEFCPCGSLYTVLEEPSNAYGLPESEFLI-VLRDVVGGMNHLRENG 132
Query: 404 IIHRDVKTNNILL----DSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCY 459
I+HR++K NI+ D K+ DFG +R D VS GT Y+ P+ ++
Sbjct: 133 IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSL--YGTEEYLHPDMYERA 190
Query: 460 QLTDKS--------DVYSFGVVL 474
L D++S GV
Sbjct: 191 VLRKDHQKKYGATVDLWSIGVTF 213
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 118/278 (42%), Gaps = 38/278 (13%)
Query: 276 DLAEATNDFSREKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQ-----FMNEVE 330
DL D+ K +G G FG V + K R+V +L + + +++ F E +
Sbjct: 63 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLL-SKFEMIKRSDSAFFWEERD 121
Query: 331 ILTRLRHKNLVSLFGC--TSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNI 388
I+ +V LF RY L +V E++ G + + + W R
Sbjct: 122 IMAFANSPWVVQLFYAFQDDRY---LYMVMEYMPGGDLVNLMSNYDVPE---KWA-RFYT 174
Query: 389 AIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGL-SRLFPLDVTHVSTAPQGT 447
A E AL +H+ IHRDVK +N+LLD + +K+ADFG ++ + TA GT
Sbjct: 175 A-EVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTA-VGT 232
Query: 448 PGYVDPEYHQCYQLTD-----KSDVYSFGVVLIELI--------SSMPAVDMNRHRHEIN 494
P Y+ PE + Q D + D +S GV L E++ S+ H+ +
Sbjct: 233 PDYISPEVLKS-QGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNS 291
Query: 495 LANLAINKIQK------CAFDELIDPCLGFESDEEVKR 526
L N I K CAF + LG EE+KR
Sbjct: 292 LTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKR 329
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 98/216 (45%), Gaps = 24/216 (11%)
Query: 276 DLAEATNDFSREKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQ-----FMNEVE 330
DL D+ K +G G FG V + K R+V +L + + +++ F E +
Sbjct: 68 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLL-SKFEMIKRSDSAFFWEERD 126
Query: 331 ILTRLRHKNLVSLFGC--TSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNI 388
I+ +V LF RY L +V E++ G + + + W R
Sbjct: 127 IMAFANSPWVVQLFYAFQDDRY---LYMVMEYMPGGDLVNLMSNYDVPE---KWA-RFYT 179
Query: 389 AIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGL-SRLFPLDVTHVSTAPQGT 447
A E AL +H+ IHRDVK +N+LLD + +K+ADFG ++ + TA GT
Sbjct: 180 A-EVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTA-VGT 237
Query: 448 PGYVDPEYHQCYQLTD-----KSDVYSFGVVLIELI 478
P Y+ PE + Q D + D +S GV L E++
Sbjct: 238 PDYISPEVLKS-QGGDGYYGRECDWWSVGVFLYEML 272
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 118/278 (42%), Gaps = 38/278 (13%)
Query: 276 DLAEATNDFSREKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQ-----FMNEVE 330
DL D+ K +G G FG V + K R+V +L + + +++ F E +
Sbjct: 68 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLL-SKFEMIKRSDSAFFWEERD 126
Query: 331 ILTRLRHKNLVSLFGC--TSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNI 388
I+ +V LF RY L +V E++ G + + + W R
Sbjct: 127 IMAFANSPWVVQLFYAFQDDRY---LYMVMEYMPGGDLVNLMSNYDVPE---KWA-RFYT 179
Query: 389 AIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGL-SRLFPLDVTHVSTAPQGT 447
A E AL +H+ IHRDVK +N+LLD + +K+ADFG ++ + TA GT
Sbjct: 180 A-EVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTA-VGT 237
Query: 448 PGYVDPEYHQCYQLTD-----KSDVYSFGVVLIELI--------SSMPAVDMNRHRHEIN 494
P Y+ PE + Q D + D +S GV L E++ S+ H+ +
Sbjct: 238 PDYISPEVLKS-QGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNS 296
Query: 495 LANLAINKIQK------CAFDELIDPCLGFESDEEVKR 526
L N I K CAF + LG EE+KR
Sbjct: 297 LTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKR 334
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 99/209 (47%), Gaps = 37/209 (17%)
Query: 288 KELGDGGFGTV---YYGKLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVS 342
K +G G G V Y L+ R VA+K+L N ++ E+ ++ + HKN++
Sbjct: 30 KPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 87
Query: 343 LFGC-TSRYS----QGLLLVYEFV-ANGTVADQLHGDRAKHGLLTWPIRMNIAIETASAL 396
L T + S Q + +V E + AN + Q+ D + L + + +
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLY--------QMLCGI 139
Query: 397 AYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSR-------LFPLDVTHVSTAPQGTPG 449
+LH++ IIHRD+K +NI++ S+ +K+ DFGL+R + P VT AP+ G
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 450 YVDPEYHQCYQLTDKSDVYSFGVVLIELI 478
Y+ + D++S G ++ E+I
Sbjct: 200 -------MGYK--ENVDIWSVGCIMGEMI 219
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 96/211 (45%), Gaps = 37/211 (17%)
Query: 288 KELGDGGFGTV---YYGKLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVS 342
K +G G G V Y L+ R VA+K+L N ++ E+ ++ + HKN++
Sbjct: 32 KPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 89
Query: 343 LFGC-TSRYS----QGLLLVYEFV-ANGTVADQLHGDRAKHGLLTWPIRMNIAIETASAL 396
L T + S Q + +V E + AN Q+ D + L + + +
Sbjct: 90 LLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLY--------QMLCGI 141
Query: 397 AYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSR-------LFPLDVTHVSTAPQGTPG 449
+LH++ IIHRD+K +NI++ S+ +K+ DFGL+R + P VT AP+ G
Sbjct: 142 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVVTRYYRAPEVILG 201
Query: 450 YVDPEYHQCYQLTDKSDVYSFGVVLIELISS 480
+ D++S G ++ E+I
Sbjct: 202 ---------MGYKENVDIWSVGCIMGEMIKG 223
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 95/202 (47%), Gaps = 23/202 (11%)
Query: 288 KELGDGGFGTV---YYGKLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVS 342
K +G G G V Y L+ R VA+K+L N ++ E+ ++ + HKN++
Sbjct: 30 KPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 87
Query: 343 LFGC-TSRYS----QGLLLVYEFV-ANGTVADQLHGDRAKHGLLTWPIRMNIAIETASAL 396
L T + S Q + +V E + AN Q+ D + L + + +
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLY--------QMLCGI 139
Query: 397 AYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYH 456
+LH++ IIHRD+K +NI++ S+ +K+ DFGL+R + + T T Y PE
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPEVVTRYYRAPEVI 197
Query: 457 QCYQLTDKSDVYSFGVVLIELI 478
+ D++S G ++ E+I
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMI 219
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 92/212 (43%), Gaps = 19/212 (8%)
Query: 286 REKELGDGGFGTVYYG-KLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLF 344
+E LG+G V L +E AVK + + EVE+L + + V
Sbjct: 17 QEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLEL 76
Query: 345 GCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDI 404
LV+E + G++ +H R + L + ++A SAL +LH I
Sbjct: 77 IEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVA----SALDFLHNKGI 132
Query: 405 IHRDVKTNNILLD---SNFCVKVADFGLSRLFPL--DVTHVST----APQGTPGYVDPEY 455
HRD+K NIL + VK+ DF L L D + +ST P G+ Y+ PE
Sbjct: 133 AHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEV 192
Query: 456 HQCY----QLTDKS-DVYSFGVVLIELISSMP 482
+ + + DK D++S GV+L L+S P
Sbjct: 193 VEAFSEEASIYDKRCDLWSLGVILYILLSGYP 224
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 61/121 (50%), Gaps = 13/121 (10%)
Query: 378 GLLTWPIRM----NIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLF 433
G PI M + + + A + +L + IHRD+ NILL N VK+ DFGL+R
Sbjct: 190 GFYKEPITMEDLISYSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDI 249
Query: 434 PLDVTHVSTAPQGTP-GYVDPE--YHQCYQLTDKSDVYSFGVVLIELI----SSMPAVDM 486
+ +V P ++ PE + + Y + KSDV+S+GV+L E+ S P V M
Sbjct: 250 YKNPDYVRKGDTRLPLKWMAPESIFDKIY--STKSDVWSYGVLLWEIFSLGGSPYPGVQM 307
Query: 487 N 487
+
Sbjct: 308 D 308
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 96/202 (47%), Gaps = 23/202 (11%)
Query: 288 KELGDGGFGTV---YYGKLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVS 342
K +G G G V Y L+ R VA+K+L N ++ E+ ++ + HKN++
Sbjct: 30 KPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 87
Query: 343 LFGC-TSRYS----QGLLLVYEFV-ANGTVADQLHGDRAKHGLLTWPIRMNIAIETASAL 396
L T + S Q + +V E + AN + Q+ D + L + + +
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLY--------QMLCGI 139
Query: 397 AYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYH 456
+LH++ IIHRD+K +NI++ S+ +K+ DFGL+R + + T T Y PE
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVI 197
Query: 457 QCYQLTDKSDVYSFGVVLIELI 478
+ D++S G ++ E+I
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMI 219
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 94/221 (42%), Gaps = 17/221 (7%)
Query: 269 VPIFSYSDLAEATNDFSREKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNE 328
+PI SD E K++G G FG + K E+ + + + E E
Sbjct: 12 LPIMHDSDRYELV------KDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKRE 65
Query: 329 VEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNI 388
+ LRH N+V F L +V E+ + G + +++ G +
Sbjct: 66 IINHRSLRHPNIVR-FKEVILTPTHLAIVMEYASGGELFERI----CNAGRFSEDEARFF 120
Query: 389 AIETASALAYLHASDIIHRDVKTNNILLDSNFC--VKVADFGLSRLFPLDVTHVSTAPQG 446
+ S ++Y HA + HRD+K N LLD + +K+ FG S+ L ST G
Sbjct: 121 FQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTV--G 178
Query: 447 TPGYVDPEYHQCYQLTDK-SDVYSFGVVL-IELISSMPAVD 485
TP Y+ PE + K +DV+S GV L + L+ + P D
Sbjct: 179 TPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFED 219
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 80/163 (49%), Gaps = 9/163 (5%)
Query: 323 EQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLL-LVYEFVANGTVADQLHGDRAKHGLL- 380
E E I L+H ++V L S S G+L +V+EF+ + ++ RA G +
Sbjct: 71 EDLKREASICHMLKHPHIVELLETYS--SDGMLYMVFEFMDGADLCFEI-VKRADAGFVY 127
Query: 381 TWPIRMNIAIETASALAYLHASDIIHRDVKTNNILLDS---NFCVKVADFGLSRLFPLDV 437
+ + + + AL Y H ++IIHRDVK N+LL S + VK+ DFG++ +
Sbjct: 128 SEAVASHYMRQILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLG-ES 186
Query: 438 THVSTAPQGTPGYVDPEYHQCYQLTDKSDVYSFGVVLIELISS 480
V+ GTP ++ PE + DV+ GV+L L+S
Sbjct: 187 GLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 90/204 (44%), Gaps = 27/204 (13%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
+G G +G V + G +VA+K+LY + ++ E+ +L +RH+N++ L
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDV 92
Query: 347 -----TSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHA 401
T LV F+ G KH L + + L Y+HA
Sbjct: 93 FTPDETLDDFTDFYLVMPFMGTDL------GKLMKHEKLGEDRIQFLVYQMLKGLRYIHA 146
Query: 402 SDIIHRDVKTNNILLDSNFCVKVADFGLSR-----LFPLDVTHVSTAPQGTPGYVDPEYH 456
+ IIHRD+K N+ ++ + +K+ DFGL+R + VT AP+ ++
Sbjct: 147 AGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVVTRWYRAPEVILNWM----- 201
Query: 457 QCYQLTDKSDVYSFGVVLIELISS 480
+ T D++S G ++ E+I+
Sbjct: 202 ---RYTQTVDIWSVGCIMAEMITG 222
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 90/203 (44%), Gaps = 24/203 (11%)
Query: 290 LGDGGFGTVYYGKLKDGREVAVKRLYDNN--YRRVEQFMNEVEILTRLRHKNLVSLFG-- 345
LG G V+ G+ K ++ ++++N R V+ M E E+L +L HKN+V LF
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIE 76
Query: 346 --CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASD 403
T+R+ +L+ EF G++ L +GL + + + + +L +
Sbjct: 77 EETTTRHK---VLIMEFCPCGSLYTVLEEPSNAYGLPESEFLI-VLRDVVGGMNHLRENG 132
Query: 404 IIHRDVKTNNILL----DSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCY 459
I+HR++K NI+ D K+ DFG +R D V GT Y+ P+ ++
Sbjct: 133 IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXL--YGTEEYLHPDMYERA 190
Query: 460 QLTDKS--------DVYSFGVVL 474
L D++S GV
Sbjct: 191 VLRKDHQKKYGATVDLWSIGVTF 213
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 288 KELGDGGFGTV---YYGKLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVS 342
K +G G G V Y L+ R VA+K+L N ++ E+ ++ + HKN++
Sbjct: 31 KPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 88
Query: 343 LFGC-TSRYS----QGLLLVYEFV-ANGTVADQLHGDRAKHGLLTWPIRMNIAIETASAL 396
L T + S Q + +V E + AN Q+ D + L + + +
Sbjct: 89 LLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLY--------QMLCGI 140
Query: 397 AYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYH 456
+LH++ IIHRD+K +NI++ S+ +K+ DFGL+R + + T T Y PE
Sbjct: 141 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVI 198
Query: 457 QCYQLTDKSDVYSFGVVLIELISS 480
+ D++S G ++ E+I
Sbjct: 199 LGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 95/202 (47%), Gaps = 23/202 (11%)
Query: 288 KELGDGGFGTV---YYGKLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVS 342
K +G G G V Y L+ R VA+K+L N ++ E+ ++ + HKN++
Sbjct: 30 KPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 87
Query: 343 LFGC-TSRYS----QGLLLVYEFV-ANGTVADQLHGDRAKHGLLTWPIRMNIAIETASAL 396
L T + S Q + +V E + AN Q+ D + L + + +
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLY--------QMLCGI 139
Query: 397 AYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYH 456
+LH++ IIHRD+K +NI++ S+ +K+ DFGL+R + + T T Y PE
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVI 197
Query: 457 QCYQLTDKSDVYSFGVVLIELI 478
+ D++S G ++ E+I
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMI 219
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 92/211 (43%), Gaps = 33/211 (15%)
Query: 284 FSREKELGDGGFGTVYYG-KLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNL 340
+ + K +G G G V G VAVK+L N ++ E+ +L + HKN+
Sbjct: 26 YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNI 85
Query: 341 VSLFGC-----TSRYSQGLLLVYEFV-ANGTVADQLHGDRAKHGLLTWPIRMNIAIETAS 394
+SL T Q + LV E + AN + D + L + +
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLY--------QMLC 137
Query: 395 ALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSR-------LFPLDVTHVSTAPQGT 447
+ +LH++ IIHRD+K +NI++ S+ +K+ DFGL+R + P VT AP+
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVI 197
Query: 448 PGYVDPEYHQCYQLTDKSDVYSFGVVLIELI 478
G D++S G ++ EL+
Sbjct: 198 LG---------MGYAANVDIWSVGCIMGELV 219
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 93/211 (44%), Gaps = 33/211 (15%)
Query: 284 FSREKELGDGGFGTVYYG-KLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNL 340
+ + K +G G G V G VAVK+L N ++ E+ +L + HKN+
Sbjct: 24 YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNI 83
Query: 341 VSLFGC-----TSRYSQGLLLVYEFV-ANGTVADQLHGDRAKHGLLTWPIRMNIAIETAS 394
+SL T Q + LV E + AN + D + L + +
Sbjct: 84 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLY--------QMLC 135
Query: 395 ALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSR-------LFPLDVTHVSTAPQGT 447
+ +LH++ IIHRD+K +NI++ S+ +K+ DFGL+R + P VT AP+
Sbjct: 136 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPYVVTRYYRAPEVI 195
Query: 448 PGYVDPEYHQCYQLTDKSDVYSFGVVLIELI 478
G + D++S G ++ EL+
Sbjct: 196 LG---------MGYKENVDIWSVGCIMGELV 217
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 95/202 (47%), Gaps = 23/202 (11%)
Query: 288 KELGDGGFGTV---YYGKLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVS 342
K +G G G V Y L+ R VA+K+L N ++ E+ ++ + HKN++
Sbjct: 30 KPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 87
Query: 343 LFGC-TSRYS----QGLLLVYEFV-ANGTVADQLHGDRAKHGLLTWPIRMNIAIETASAL 396
L T + S Q + +V E + AN Q+ D + L + + +
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLY--------QMLCGI 139
Query: 397 AYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYH 456
+LH++ IIHRD+K +NI++ S+ +K+ DFGL+R + + T T Y PE
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVI 197
Query: 457 QCYQLTDKSDVYSFGVVLIELI 478
+ D++S G ++ E+I
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMI 219
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 97/222 (43%), Gaps = 36/222 (16%)
Query: 287 EKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLR-HKNLVSLFG 345
EK LG G GTV + GR VAVKR+ + + + E+++LT H N++ +
Sbjct: 20 EKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYY- 75
Query: 346 CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMN---IAIETASALAYLHAS 402
C+ + L + E + N + D + L N + + AS +A+LH+
Sbjct: 76 CSETTDRFLYIALE-LCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL 134
Query: 403 DIIHRDVKTNNILLDS-------------NFCVKVADFGLSRLFPLDVTHVS-----TAP 444
IIHRD+K NIL+ + N + ++DFGL + LD S P
Sbjct: 135 KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK--KLDSGQSSFRTNLNNP 192
Query: 445 QGTPGYVDPE-------YHQCYQLTDKSDVYSFGVVLIELIS 479
GT G+ PE +LT D++S G V ++S
Sbjct: 193 SGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 97/218 (44%), Gaps = 32/218 (14%)
Query: 287 EKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLR-HKNLVSLFG 345
EK LG G GTV + GR VAVKR+ + + + E+++LT H N++ +
Sbjct: 38 EKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF---CDIALMEIKLLTESDDHPNVIRYY- 93
Query: 346 CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMN---IAIETASALAYLHAS 402
C+ + L + E + N + D + L N + + AS +A+LH+
Sbjct: 94 CSETTDRFLYIALE-LCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL 152
Query: 403 DIIHRDVKTNNILLDS-------------NFCVKVADFGLSRLFPLDVTHVS-----TAP 444
IIHRD+K NIL+ + N + ++DFGL + LD P
Sbjct: 153 KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK--KLDSGQXXFRXNLNNP 210
Query: 445 QGTPGYVDPEYHQ---CYQLTDKSDVYSFGVVLIELIS 479
GT G+ PE + +LT D++S G V ++S
Sbjct: 211 SGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILS 248
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 97/218 (44%), Gaps = 32/218 (14%)
Query: 287 EKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLR-HKNLVSLFG 345
EK LG G GTV + GR VAVKR+ + + + E+++LT H N++ +
Sbjct: 38 EKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF---CDIALMEIKLLTESDDHPNVIRYY- 93
Query: 346 CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMN---IAIETASALAYLHAS 402
C+ + L + E + N + D + L N + + AS +A+LH+
Sbjct: 94 CSETTDRFLYIALE-LCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL 152
Query: 403 DIIHRDVKTNNILLDS-------------NFCVKVADFGLSRLFPLDVTHVS-----TAP 444
IIHRD+K NIL+ + N + ++DFGL + LD P
Sbjct: 153 KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK--KLDSGQXXFRXNLNNP 210
Query: 445 QGTPGYVDPEYHQ---CYQLTDKSDVYSFGVVLIELIS 479
GT G+ PE + +LT D++S G V ++S
Sbjct: 211 SGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILS 248
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 94/217 (43%), Gaps = 38/217 (17%)
Query: 290 LGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEI--LTRLRHKNLVSLFGCT 347
+G G +G VY G L D R VAVK ++ + F+NE I + + H N+
Sbjct: 21 IGRGRYGAVYKGSL-DERPVAVKVF---SFANRQNFINEKNIYRVPLMEHDNIARFIVGD 76
Query: 348 SRYSQG----LLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHAS- 402
R + LLV E+ NG++ L + W +A LAYLH
Sbjct: 77 ERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSD-----WVSSCRLAHSVTRGLAYLHTEL 131
Query: 403 --------DIIHRDVKTNNILLDSNFCVKVADFGLS------RLF-PLDVTHVSTAPQGT 447
I HRD+ + N+L+ ++ ++DFGLS RL P + + + + GT
Sbjct: 132 PRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGT 191
Query: 448 PGYVDPEYHQ-CYQLTD------KSDVYSFGVVLIEL 477
Y+ PE + L D + D+Y+ G++ E+
Sbjct: 192 IRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEI 228
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 93/221 (42%), Gaps = 17/221 (7%)
Query: 269 VPIFSYSDLAEATNDFSREKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNE 328
+PI SD E K++G G FG + K E+ + + + E E
Sbjct: 12 LPIMHDSDRYELV------KDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKRE 65
Query: 329 VEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNI 388
+ LRH N+V F L +V E+ + G + +++ G +
Sbjct: 66 IINHRSLRHPNIVR-FKEVILTPTHLAIVMEYASGGELFERI----CNAGRFSEDEARFF 120
Query: 389 AIETASALAYLHASDIIHRDVKTNNILLDSNFC--VKVADFGLSRLFPLDVTHVSTAPQG 446
+ S ++Y HA + HRD+K N LLD + +K+ FG S+ L T G
Sbjct: 121 FQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTV--G 178
Query: 447 TPGYVDPEYHQCYQLTDK-SDVYSFGVVL-IELISSMPAVD 485
TP Y+ PE + K +DV+S GV L + L+ + P D
Sbjct: 179 TPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFED 219
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 94/202 (46%), Gaps = 25/202 (12%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
+G G +G+V K G VAVK+L + ++ E+ +L ++H+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 347 TS------RYSQGLLLVYEFVA--NGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAY 398
+ ++ L+ + A N V Q D L+ +R L Y
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILR---------GLKY 140
Query: 399 LHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQC 458
+H++DIIHRD+K +N+ ++ + +K+ DFGL+R T T Y PE
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDXELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 196
Query: 459 YQLTDKS-DVYSFGVVLIELIS 479
+ +++ D++S G ++ EL++
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLT 218
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 117/268 (43%), Gaps = 47/268 (17%)
Query: 283 DFSREKELGDGGFGTVY---------YGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILT 333
D + LG G F ++ YG+L + EV +K L + E F +++
Sbjct: 9 DLIFNESLGQGTFTKIFKGVRREVGDYGQLHE-TEVLLKVLDKAHRNYSESFFEAASMMS 67
Query: 334 RLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETA 393
+L HK+LV +G + +L V EFV G++ L ++ +L W ++ +A + A
Sbjct: 68 KLSHKHLVLNYGVCVCGDENIL-VQEFVKFGSLDTYLKKNKNCINIL-W--KLEVAKQLA 123
Query: 394 SALAYLHASDIIHRDVKTNNILL--------DSNFCVKVADFGLS-RLFPLDVTHVSTAP 444
+A+ +L + +IH +V NILL + +K++D G+S + P D+
Sbjct: 124 AAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDIL------ 177
Query: 445 QGTPGYVDPE-YHQCYQLTDKSDVYSFGVVLIELISS----MPAVDMNRH------RHEI 493
Q +V PE L +D +SFG L E+ S + A+D R RH++
Sbjct: 178 QERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRHQL 237
Query: 494 NLANLAINKIQKCAFDELIDPCLGFESD 521
A LI+ C+ +E D
Sbjct: 238 PAPKAA-------ELANLINNCMDYEPD 258
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 95/202 (47%), Gaps = 23/202 (11%)
Query: 288 KELGDGGFGTV---YYGKLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVS 342
K +G G G V Y L+ R VA+K+L N ++ E+ ++ + HKN++
Sbjct: 35 KPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 92
Query: 343 LFGC-TSRYS----QGLLLVYEFV-ANGTVADQLHGDRAKHGLLTWPIRMNIAIETASAL 396
L T + S Q + +V E + AN Q+ D + L + + +
Sbjct: 93 LLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLY--------QMLCGI 144
Query: 397 AYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYH 456
+LH++ IIHRD+K +NI++ S+ +K+ DFGL+R + + T T Y PE
Sbjct: 145 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVI 202
Query: 457 QCYQLTDKSDVYSFGVVLIELI 478
+ D++S G ++ E++
Sbjct: 203 LGMGYKENVDLWSVGCIMGEMV 224
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 101/220 (45%), Gaps = 17/220 (7%)
Query: 270 PIFSYSDLA----EATNDFSREKELGDGGFGTVYYG-KLKDGREVAVKRLYD--NNYRRV 322
P F +LA E + +G G +G+V K G VAVK+L +
Sbjct: 2 PTFYRQELAKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA 61
Query: 323 EQFMNEVEILTRLRHKNLVSLFGC--TSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLL 380
++ E+ +L ++H+N++ L +R + VY V + AD + K L
Sbjct: 62 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY-LVTHLMGADL--NNIVKCAKL 118
Query: 381 TWPIRMNIAIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHV 440
T + + L Y+H++DIIHRD+K +N+ ++ + +K+ DFGL+R
Sbjct: 119 TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDE 174
Query: 441 STAPQGTPGYVDPEYHQCYQLTDKS-DVYSFGVVLIELIS 479
T T Y PE + +++ D++S G ++ EL++
Sbjct: 175 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 214
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 96/209 (45%), Gaps = 37/209 (17%)
Query: 288 KELGDGGFGTV---YYGKLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVS 342
K +G G G V Y L+ R VA+K+L N ++ E+ ++ + HKN++
Sbjct: 24 KPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 81
Query: 343 LFGC-TSRYS----QGLLLVYEFV-ANGTVADQLHGDRAKHGLLTWPIRMNIAIETASAL 396
L T + S Q + +V E + AN Q+ D + L + + +
Sbjct: 82 LLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLY--------QMLCGI 133
Query: 397 AYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSR-------LFPLDVTHVSTAPQGTPG 449
+LH++ IIHRD+K +NI++ S+ +K+ DFGL+R + P VT AP+ G
Sbjct: 134 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 193
Query: 450 YVDPEYHQCYQLTDKSDVYSFGVVLIELI 478
+ D++S G ++ E++
Sbjct: 194 ---------MGYKENVDLWSVGCIMGEMV 213
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 99/202 (49%), Gaps = 25/202 (12%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
+G G +G+V +K G ++AVK+L + ++ E+ +L ++H+N++ L
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 118
Query: 347 TSRYSQ-----GLLLVYEFVA---NGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAY 398
+ + + LV + N V Q D L+ +R L Y
Sbjct: 119 FTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 169
Query: 399 LHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVT-HVSTAPQGTPGYVDPEYHQ 457
+H++DIIHRD+K +N+ ++ + +K+ DFGL+R ++T +V+T P + H
Sbjct: 170 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMH- 228
Query: 458 CYQLTDKSDVYSFGVVLIELIS 479
Y +T D++S G ++ EL++
Sbjct: 229 -YNMT--VDIWSVGCIMAELLT 247
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 114/279 (40%), Gaps = 50/279 (17%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYDNNYRRVEQFMN------EVEILTRLR----HK 338
LG GGFGTV+ G +L D +VA+K + N + EV +L ++ H
Sbjct: 39 LGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHP 98
Query: 339 NLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAY 398
++ L +G +LV E A L + G L + +A+ +
Sbjct: 99 GVIRLLDWFET-QEGFMLVLE---RPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQH 154
Query: 399 LHASDIIHRDVKTNNILLD-SNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEY-- 455
H+ ++HRD+K NIL+D C K+ DFG L T GT Y PE+
Sbjct: 155 CHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALL---HDEPYTDFDGTRVYSPPEWIS 211
Query: 456 -HQCYQLTDKSDVYSFGVVLIELISSMPAVDMNRHRHEINLANLAINKIQKCAFDELIDP 514
HQ + L + V+S G++L +++ D+ R + E+++
Sbjct: 212 RHQYHAL--PATVWSLGILLYDMVCG----DIPFERDQ-----------------EILEA 248
Query: 515 CLGFESDEEVKRMTTSVAELAFLCLQQNKELRPSMEEVL 553
L F + ++ L CL RPS+EE+L
Sbjct: 249 ELHFPA-----HVSPDCCALIRRCLAPKPSSRPSLEEIL 282
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 389 AIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP 448
+ + A + +L + IHRD+ NILL VK+ DFGL+R D +V P
Sbjct: 199 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 258
Query: 449 -GYVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
++ PE T +SDV+SFGV+L E+ S
Sbjct: 259 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 389 AIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP 448
+ + A + +L + IHRD+ NILL VK+ DFGL+R D +V P
Sbjct: 197 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 256
Query: 449 -GYVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
++ PE T +SDV+SFGV+L E+ S
Sbjct: 257 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 96/209 (45%), Gaps = 37/209 (17%)
Query: 288 KELGDGGFGTV---YYGKLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVS 342
K +G G G V Y L+ R VA+K+L N ++ E+ ++ + HKN++
Sbjct: 30 KPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 87
Query: 343 LFGC-TSRYS----QGLLLVYEFV-ANGTVADQLHGDRAKHGLLTWPIRMNIAIETASAL 396
L T + S Q + +V E + AN Q+ D + L + + +
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLY--------QMLCGI 139
Query: 397 AYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSR-------LFPLDVTHVSTAPQGTPG 449
+LH++ IIHRD+K +NI++ S+ +K+ DFGL+R + P VT AP+ G
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILG 199
Query: 450 YVDPEYHQCYQLTDKSDVYSFGVVLIELI 478
+ D++S G ++ E++
Sbjct: 200 ---------MGYKENVDIWSVGCIMGEMV 219
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 389 AIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP 448
+ + A + +L + IHRD+ NILL VK+ DFGL+R D +V P
Sbjct: 204 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 263
Query: 449 -GYVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
++ PE T +SDV+SFGV+L E+ S
Sbjct: 264 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 389 AIETASALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTP 448
+ + A + +L + IHRD+ NILL VK+ DFGL+R D +V P
Sbjct: 206 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 265
Query: 449 -GYVDPEYHQCYQLTDKSDVYSFGVVLIELIS 479
++ PE T +SDV+SFGV+L E+ S
Sbjct: 266 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 97/208 (46%), Gaps = 37/208 (17%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
+G G +G+V K G VAVK+L + ++ E+ +L ++H+N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 347 TS------RYSQGLLLVYEFVA--NGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAY 398
+ ++ L+ + A N V Q D L+ +R L Y
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 147
Query: 399 LHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQC 458
+H++DIIHRD+K +N+ ++ + +K+ DFGL+R TA + T GYV +++
Sbjct: 148 IHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---------HTADEMT-GYVATRWYRA 197
Query: 459 YQLT-------DKSDVYSFGVVLIELIS 479
++ D++S G ++ EL++
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLT 225
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 94/202 (46%), Gaps = 25/202 (12%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
+G G +G+V K G VAVK+L + ++ E+ +L ++H+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 347 TS------RYSQGLLLVYEFVA--NGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAY 398
+ ++ L+ + A N V Q D L+ +R L Y
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILR---------GLKY 140
Query: 399 LHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQC 458
+H++DIIHRD+K +N+ ++ + +K+ DFGL+R T T Y PE
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 196
Query: 459 YQLTDKS-DVYSFGVVLIELIS 479
+ +++ D++S G ++ EL++
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLT 218
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 97/208 (46%), Gaps = 37/208 (17%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
+G G +G+V K G VAVK+L + ++ E+ +L ++H+N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 347 TS------RYSQGLLLVYEFVA--NGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAY 398
+ ++ L+ + A N V Q D L+ +R L Y
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 147
Query: 399 LHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQC 458
+H++DIIHRD+K +N+ ++ + +K+ DFGL+R TA + T GYV +++
Sbjct: 148 IHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---------HTADEMT-GYVATRWYRA 197
Query: 459 YQLT-------DKSDVYSFGVVLIELIS 479
++ D++S G ++ EL++
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLT 225
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 97/208 (46%), Gaps = 37/208 (17%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
+G G +G+V K G VAVK+L + ++ E+ +L ++H+N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 347 TS------RYSQGLLLVYEFVA--NGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAY 398
+ ++ L+ + A N V Q D L+ +R L Y
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 147
Query: 399 LHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQC 458
+H++DIIHRD+K +N+ ++ + +K+ DFGL+R TA + T GYV +++
Sbjct: 148 IHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---------HTADEMT-GYVATRWYRA 197
Query: 459 YQLT-------DKSDVYSFGVVLIELIS 479
++ D++S G ++ EL++
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLT 225
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 96/222 (43%), Gaps = 36/222 (16%)
Query: 287 EKELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLR-HKNLVSLFG 345
EK LG G GTV + GR VAVKR+ + + + E+++LT H N++ +
Sbjct: 20 EKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYY- 75
Query: 346 CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMN---IAIETASALAYLHAS 402
C+ + L + E + N + D + L N + + AS +A+LH+
Sbjct: 76 CSETTDRFLYIALE-LCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL 134
Query: 403 DIIHRDVKTNNILLDS-------------NFCVKVADFGLSRLFPLDVTHVS-----TAP 444
IIHRD+K NIL+ + N + ++DFGL + LD P
Sbjct: 135 KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK--KLDSGQXXFRXNLNNP 192
Query: 445 QGTPGYVDPE-------YHQCYQLTDKSDVYSFGVVLIELIS 479
GT G+ PE +LT D++S G V ++S
Sbjct: 193 SGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 94/202 (46%), Gaps = 25/202 (12%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
+G G +G+V K G VAVK+L + ++ E+ +L ++H+N++ L
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 347 TS------RYSQGLLLVYEFVA--NGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAY 398
+ ++ L+ + A N V Q D L+ +R L Y
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 145
Query: 399 LHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQC 458
+H++DIIHRD+K +N+ ++ + +K+ DFGL+R T T Y PE
Sbjct: 146 IHSADIIHRDLKPSNLAVNEDXELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 201
Query: 459 YQLTDKS-DVYSFGVVLIELIS 479
+ +++ D++S G ++ EL++
Sbjct: 202 WMHYNQTVDIWSVGCIMAELLT 223
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 96/211 (45%), Gaps = 41/211 (19%)
Query: 288 KELGDGGFGTV---YYGKLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVS 342
+ +G G +G+V Y +L+ ++VAVK+L + + E+ +L L+H+N++
Sbjct: 34 RPVGSGAYGSVCSAYDARLR--QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIG 91
Query: 343 LFGC------TSRYSQGLLLVYEFVA--NGTVADQLHGDRAKHGLLTWPIRMNIAIETAS 394
L +S+ L+ A N V Q D L+ +R
Sbjct: 92 LLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLR--------- 142
Query: 395 ALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPE 454
L Y+H++ IIHRD+K +N+ ++ + +++ DFGL+R A + GYV
Sbjct: 143 GLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLAR----------QADEEMTGYVATR 192
Query: 455 YHQCYQLT-------DKSDVYSFGVVLIELI 478
+++ ++ D++S G ++ EL+
Sbjct: 193 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 223
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 96/209 (45%), Gaps = 37/209 (17%)
Query: 288 KELGDGGFGTV---YYGKLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVS 342
K +G G G V Y L+ R VA+K+L N ++ E+ ++ + HKN++
Sbjct: 30 KPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 87
Query: 343 LFGC-TSRYS----QGLLLVYEFV-ANGTVADQLHGDRAKHGLLTWPIRMNIAIETASAL 396
L T + S Q + +V E + AN Q+ D + L + + +
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLY--------QMLCGI 139
Query: 397 AYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSR-------LFPLDVTHVSTAPQGTPG 449
+LH++ IIHRD+K +NI++ S+ +K+ DFGL+R + P VT AP+ G
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILG 199
Query: 450 YVDPEYHQCYQLTDKSDVYSFGVVLIELI 478
+ D++S G ++ E++
Sbjct: 200 ---------MGYKENVDLWSVGCIMGEMV 219
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 65/135 (48%), Gaps = 13/135 (9%)
Query: 354 LLLVYEFVANGTVADQLH--GDRAKHGLLTWPIRMNIAIETASALAYLHASDIIHRDVKT 411
LL+V E + G + ++ GD+A T I A+ YLH+ +I HRDVK
Sbjct: 96 LLIVMECLDGGELFSRIQDRGDQA----FTEREASEIMKSIGEAIQYLHSINIAHRDVKP 151
Query: 412 NNILLDS---NFCVKVADFGLSRLFPLDVTHVS-TAPQGTPGYVDPEYHQCYQLTDKSDV 467
N+L S N +K+ DFG ++ +H S T P TP YV PE + D+
Sbjct: 152 ENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDM 208
Query: 468 YSFGVVLIELISSMP 482
+S GV++ L+ P
Sbjct: 209 WSLGVIMYILLCGYP 223
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 94/202 (46%), Gaps = 25/202 (12%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
+G G +G+V K G VAVK+L + ++ E+ +L ++H+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 347 TS------RYSQGLLLVYEFVA--NGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAY 398
+ ++ L+ + A N V Q D L+ +R L Y
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 140
Query: 399 LHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQC 458
+H++DIIHRD+K +N+ ++ + +K+ DFGL+R T T Y PE
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 196
Query: 459 YQLTDKS-DVYSFGVVLIELIS 479
+ +++ D++S G ++ EL++
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLT 218
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 65/135 (48%), Gaps = 13/135 (9%)
Query: 354 LLLVYEFVANGTVADQLH--GDRAKHGLLTWPIRMNIAIETASALAYLHASDIIHRDVKT 411
LL+V E + G + ++ GD+A T I A+ YLH+ +I HRDVK
Sbjct: 134 LLIVMECLDGGELFSRIQDRGDQA----FTEREASEIMKSIGEAIQYLHSINIAHRDVKP 189
Query: 412 NNILLDS---NFCVKVADFGLSRLFPLDVTHVS-TAPQGTPGYVDPEYHQCYQLTDKSDV 467
N+L S N +K+ DFG ++ +H S T P TP YV PE + D+
Sbjct: 190 ENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDM 246
Query: 468 YSFGVVLIELISSMP 482
+S GV++ L+ P
Sbjct: 247 WSLGVIMYILLCGYP 261
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 65/135 (48%), Gaps = 13/135 (9%)
Query: 354 LLLVYEFVANGTVADQLH--GDRAKHGLLTWPIRMNIAIETASALAYLHASDIIHRDVKT 411
LL+V E + G + ++ GD+A T I A+ YLH+ +I HRDVK
Sbjct: 104 LLIVMECLDGGELFSRIQDRGDQA----FTEREASEIMKSIGEAIQYLHSINIAHRDVKP 159
Query: 412 NNILLDS---NFCVKVADFGLSRLFPLDVTHVS-TAPQGTPGYVDPEYHQCYQLTDKSDV 467
N+L S N +K+ DFG ++ +H S T P TP YV PE + D+
Sbjct: 160 ENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDM 216
Query: 468 YSFGVVLIELISSMP 482
+S GV++ L+ P
Sbjct: 217 WSLGVIMYILLCGYP 231
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 65/135 (48%), Gaps = 13/135 (9%)
Query: 354 LLLVYEFVANGTVADQLH--GDRAKHGLLTWPIRMNIAIETASALAYLHASDIIHRDVKT 411
LL+V E + G + ++ GD+A T I A+ YLH+ +I HRDVK
Sbjct: 94 LLIVMECLDGGELFSRIQDRGDQA----FTEREASEIMKSIGEAIQYLHSINIAHRDVKP 149
Query: 412 NNILLDS---NFCVKVADFGLSRLFPLDVTHVS-TAPQGTPGYVDPEYHQCYQLTDKSDV 467
N+L S N +K+ DFG ++ +H S T P TP YV PE + D+
Sbjct: 150 ENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDM 206
Query: 468 YSFGVVLIELISSMP 482
+S GV++ L+ P
Sbjct: 207 WSLGVIMYILLCGYP 221
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 65/135 (48%), Gaps = 13/135 (9%)
Query: 354 LLLVYEFVANGTVADQLH--GDRAKHGLLTWPIRMNIAIETASALAYLHASDIIHRDVKT 411
LL+V E + G + ++ GD+A T I A+ YLH+ +I HRDVK
Sbjct: 95 LLIVMECLDGGELFSRIQDRGDQA----FTEREASEIMKSIGEAIQYLHSINIAHRDVKP 150
Query: 412 NNILLDS---NFCVKVADFGLSRLFPLDVTHVS-TAPQGTPGYVDPEYHQCYQLTDKSDV 467
N+L S N +K+ DFG ++ +H S T P TP YV PE + D+
Sbjct: 151 ENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDM 207
Query: 468 YSFGVVLIELISSMP 482
+S GV++ L+ P
Sbjct: 208 WSLGVIMYILLCGYP 222
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 94/202 (46%), Gaps = 25/202 (12%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
+G G +G+V K G VAVK+L + ++ E+ +L ++H+N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 347 TS------RYSQGLLLVYEFVA--NGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAY 398
+ ++ L+ + A N V Q D L+ +R L Y
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 145
Query: 399 LHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQC 458
+H++DIIHRD+K +N+ ++ + +K+ DFGL+R T T Y PE
Sbjct: 146 IHSADIIHRDLKPSNLAVNEDXELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 201
Query: 459 YQLTDKS-DVYSFGVVLIELIS 479
+ +++ D++S G ++ EL++
Sbjct: 202 WMHYNQTVDIWSVGCIMAELLT 223
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 116/268 (43%), Gaps = 47/268 (17%)
Query: 283 DFSREKELGDGGFGTVY---------YGKLKDGREVAVKRLYDNNYRRVEQFMNEVEILT 333
D + LG G F ++ YG+L + EV +K L + E F +++
Sbjct: 9 DLIFNESLGQGTFTKIFKGVRREVGDYGQLHE-TEVLLKVLDKAHRNYSESFFEAASMMS 67
Query: 334 RLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETA 393
+L HK+LV +G + +L V EFV G++ L ++ +L W ++ +A + A
Sbjct: 68 KLSHKHLVLNYGVCFCGDENIL-VQEFVKFGSLDTYLKKNKNCINIL-W--KLEVAKQLA 123
Query: 394 SALAYLHASDIIHRDVKTNNILL--------DSNFCVKVADFGLS-RLFPLDVTHVSTAP 444
A+ +L + +IH +V NILL + +K++D G+S + P D+
Sbjct: 124 WAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDIL------ 177
Query: 445 QGTPGYVDPE-YHQCYQLTDKSDVYSFGVVLIELISS----MPAVDMNRH------RHEI 493
Q +V PE L +D +SFG L E+ S + A+D R RH++
Sbjct: 178 QERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRHQL 237
Query: 494 NLANLAINKIQKCAFDELIDPCLGFESD 521
A LI+ C+ +E D
Sbjct: 238 PAPKAA-------ELANLINNCMDYEPD 258
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 65/135 (48%), Gaps = 13/135 (9%)
Query: 354 LLLVYEFVANGTVADQLH--GDRAKHGLLTWPIRMNIAIETASALAYLHASDIIHRDVKT 411
LL+V E + G + ++ GD+A T I A+ YLH+ +I HRDVK
Sbjct: 90 LLIVMECLDGGELFSRIQDRGDQA----FTEREASEIMKSIGEAIQYLHSINIAHRDVKP 145
Query: 412 NNILLDS---NFCVKVADFGLSRLFPLDVTHVS-TAPQGTPGYVDPEYHQCYQLTDKSDV 467
N+L S N +K+ DFG ++ +H S T P TP YV PE + D+
Sbjct: 146 ENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDM 202
Query: 468 YSFGVVLIELISSMP 482
+S GV++ L+ P
Sbjct: 203 WSLGVIMYILLCGYP 217
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 65/135 (48%), Gaps = 13/135 (9%)
Query: 354 LLLVYEFVANGTVADQLH--GDRAKHGLLTWPIRMNIAIETASALAYLHASDIIHRDVKT 411
LL+V E + G + ++ GD+A T I A+ YLH+ +I HRDVK
Sbjct: 89 LLIVMECLDGGELFSRIQDRGDQA----FTEREASEIMKSIGEAIQYLHSINIAHRDVKP 144
Query: 412 NNILLDS---NFCVKVADFGLSRLFPLDVTHVS-TAPQGTPGYVDPEYHQCYQLTDKSDV 467
N+L S N +K+ DFG ++ +H S T P TP YV PE + D+
Sbjct: 145 ENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDM 201
Query: 468 YSFGVVLIELISSMP 482
+S GV++ L+ P
Sbjct: 202 WSLGVIMYILLCGYP 216
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 94/202 (46%), Gaps = 25/202 (12%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
+G G +G+V K G VAVK+L + ++ E+ +L ++H+N++ L
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 99
Query: 347 TS------RYSQGLLLVYEFVA--NGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAY 398
+ ++ L+ + A N V Q D L+ +R L Y
Sbjct: 100 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 150
Query: 399 LHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQC 458
+H++DIIHRD+K +N+ ++ + +K+ DFGL+R T T Y PE
Sbjct: 151 IHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 206
Query: 459 YQLTDKS-DVYSFGVVLIELIS 479
+ +++ D++S G ++ EL++
Sbjct: 207 WMHYNQTVDIWSVGCIMAELLT 228
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 94/202 (46%), Gaps = 25/202 (12%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
+G G +G+V K G VAVK+L + ++ E+ +L ++H+N++ L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 347 TS------RYSQGLLLVYEFVA--NGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAY 398
+ ++ L+ + A N V Q D L+ +R L Y
Sbjct: 101 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 151
Query: 399 LHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQC 458
+H++DIIHRD+K +N+ ++ + +K+ DFGL+R T T Y PE
Sbjct: 152 IHSADIIHRDLKPSNLAVNEDXELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 207
Query: 459 YQLTDKS-DVYSFGVVLIELIS 479
+ +++ D++S G ++ EL++
Sbjct: 208 WMHYNQTVDIWSVGCIMAELLT 229
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 65/135 (48%), Gaps = 13/135 (9%)
Query: 354 LLLVYEFVANGTVADQLH--GDRAKHGLLTWPIRMNIAIETASALAYLHASDIIHRDVKT 411
LL+V E + G + ++ GD+A T I A+ YLH+ +I HRDVK
Sbjct: 90 LLIVMECLDGGELFSRIQDRGDQA----FTEREASEIMKSIGEAIQYLHSINIAHRDVKP 145
Query: 412 NNILLDS---NFCVKVADFGLSRLFPLDVTHVS-TAPQGTPGYVDPEYHQCYQLTDKSDV 467
N+L S N +K+ DFG ++ +H S T P TP YV PE + D+
Sbjct: 146 ENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDM 202
Query: 468 YSFGVVLIELISSMP 482
+S GV++ L+ P
Sbjct: 203 WSLGVIMYILLCGYP 217
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 65/135 (48%), Gaps = 13/135 (9%)
Query: 354 LLLVYEFVANGTVADQLH--GDRAKHGLLTWPIRMNIAIETASALAYLHASDIIHRDVKT 411
LL+V E + G + ++ GD+A T I A+ YLH+ +I HRDVK
Sbjct: 88 LLIVMECLDGGELFSRIQDRGDQA----FTEREASEIMKSIGEAIQYLHSINIAHRDVKP 143
Query: 412 NNILLDS---NFCVKVADFGLSRLFPLDVTHVS-TAPQGTPGYVDPEYHQCYQLTDKSDV 467
N+L S N +K+ DFG ++ +H S T P TP YV PE + D+
Sbjct: 144 ENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDM 200
Query: 468 YSFGVVLIELISSMP 482
+S GV++ L+ P
Sbjct: 201 WSLGVIMYILLCGYP 215
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 65/135 (48%), Gaps = 13/135 (9%)
Query: 354 LLLVYEFVANGTVADQLH--GDRAKHGLLTWPIRMNIAIETASALAYLHASDIIHRDVKT 411
LL+V E + G + ++ GD+A T I A+ YLH+ +I HRDVK
Sbjct: 140 LLIVMECLDGGELFSRIQDRGDQA----FTEREASEIMKSIGEAIQYLHSINIAHRDVKP 195
Query: 412 NNILLDS---NFCVKVADFGLSRLFPLDVTHVS-TAPQGTPGYVDPEYHQCYQLTDKSDV 467
N+L S N +K+ DFG ++ +H S T P TP YV PE + D+
Sbjct: 196 ENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDM 252
Query: 468 YSFGVVLIELISSMP 482
+S GV++ L+ P
Sbjct: 253 WSLGVIMYILLCGYP 267
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 94/202 (46%), Gaps = 25/202 (12%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
+G G +G+V K G VAVK+L + ++ E+ +L ++H+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 347 TS------RYSQGLLLVYEFVA--NGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAY 398
+ ++ L+ + A N V Q D L+ +R L Y
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 140
Query: 399 LHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQC 458
+H++DIIHRD+K +N+ ++ + +K+ DFGL+R T T Y PE
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGXVATRWYRAPEIMLN 196
Query: 459 YQLTDKS-DVYSFGVVLIELIS 479
+ +++ D++S G ++ EL++
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLT 218
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 93/202 (46%), Gaps = 25/202 (12%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
+G G +G+V K G VAVK+L + ++ E+ +L ++H+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 347 TS------RYSQGLLLVYEFVA--NGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAY 398
+ ++ L+ + A N V Q D L+ +R L Y
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILR---------GLKY 140
Query: 399 LHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQC 458
+H++DIIHRD+K +N+ ++ + +K+ DFGL R T T Y PE
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDSELKILDFGLCR----HTDDEMTGYVATRWYRAPEIMLN 196
Query: 459 YQLTDKS-DVYSFGVVLIELIS 479
+ +++ D++S G ++ EL++
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLT 218
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 95/205 (46%), Gaps = 31/205 (15%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
+G G +G+V K G VAVK+L + ++ E+ +L ++H+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 347 TS------RYSQGLLLVYEFVA--NGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAY 398
+ ++ L+ + A N V Q D L+ +R L Y
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 140
Query: 399 LHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQG---TPGYVDPEY 455
+H++DIIHRD+K +N+ ++ + +K+ DFGL+R H G T Y PE
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMAGFVATRWYRAPEI 193
Query: 456 HQCYQLTDKS-DVYSFGVVLIELIS 479
+ +++ D++S G ++ EL++
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 94/202 (46%), Gaps = 25/202 (12%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
+G G +G+V K G VAVK+L + ++ E+ +L ++H+N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 347 TS------RYSQGLLLVYEFVA--NGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAY 398
+ ++ L+ + A N V Q D L+ +R L Y
Sbjct: 102 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 152
Query: 399 LHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQC 458
+H++DIIHRD+K +N+ ++ + +K+ DFGL+R T T Y PE
Sbjct: 153 IHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 208
Query: 459 YQLTDKS-DVYSFGVVLIELIS 479
+ +++ D++S G ++ EL++
Sbjct: 209 WMHYNQTVDIWSVGCIMAELLT 230
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 94/202 (46%), Gaps = 25/202 (12%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
+G G +G+V K G VAVK+L + ++ E+ +L ++H+N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 347 TS------RYSQGLLLVYEFVA--NGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAY 398
+ ++ L+ + A N V Q D L+ +R L Y
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 146
Query: 399 LHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQC 458
+H++DIIHRD+K +N+ ++ + +K+ DFGL+R T T Y PE
Sbjct: 147 IHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 202
Query: 459 YQLTDKS-DVYSFGVVLIELIS 479
+ +++ D++S G ++ EL++
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLT 224
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 94/203 (46%), Gaps = 25/203 (12%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
+G G +G+V K G VAVK+L + ++ E+ +L ++H+N++ L
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 347 TS------RYSQGLLLVYEFVA--NGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAY 398
+ ++ L+ + A N V Q D L+ +R L Y
Sbjct: 109 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 159
Query: 399 LHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQC 458
+H++DIIHRD+K +N+ ++ + +K+ DFGL+R T T Y PE
Sbjct: 160 IHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 215
Query: 459 YQLTDKS-DVYSFGVVLIELISS 480
+ +++ D++S G ++ EL++
Sbjct: 216 WMHYNQTVDIWSVGCIMAELLTG 238
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 94/203 (46%), Gaps = 25/203 (12%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
+G G +G+V K G VAVK+L + ++ E+ +L ++H+N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 347 TS------RYSQGLLLVYEFVA--NGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAY 398
+ ++ L+ + A N V Q D L+ +R L Y
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 160
Query: 399 LHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQC 458
+H++DIIHRD+K +N+ ++ + +K+ DFGL+R T T Y PE
Sbjct: 161 IHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 216
Query: 459 YQLTDKS-DVYSFGVVLIELISS 480
+ +++ D++S G ++ EL++
Sbjct: 217 WMHYNQTVDIWSVGCIMAELLTG 239
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 95/205 (46%), Gaps = 31/205 (15%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
+G G +G+V K G VAVK+L + ++ E+ +L ++H+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 347 TS------RYSQGLLLVYEFVA--NGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAY 398
+ ++ L+ + A N V Q D L+ +R L Y
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 140
Query: 399 LHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQG---TPGYVDPEY 455
+H++DIIHRD+K +N+ ++ + +K+ DFGL+R H G T Y PE
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMAGFVATRWYRAPEI 193
Query: 456 HQCYQLTDKS-DVYSFGVVLIELIS 479
+ +++ D++S G ++ EL++
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 94/202 (46%), Gaps = 25/202 (12%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
+G G +G+V K G VAVK+L + ++ E+ +L ++H+N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 347 TS------RYSQGLLLVYEFVA--NGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAY 398
+ ++ L+ + A N V Q D L+ +R L Y
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 136
Query: 399 LHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQC 458
+H++DIIHRD+K +N+ ++ + +K+ DFGL+R T T Y PE
Sbjct: 137 IHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 192
Query: 459 YQLTDKS-DVYSFGVVLIELIS 479
+ +++ D++S G ++ EL++
Sbjct: 193 WMHYNQTVDIWSVGCIMAELLT 214
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 94/202 (46%), Gaps = 25/202 (12%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
+G G +G+V K G VAVK+L + ++ E+ +L ++H+N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 347 TS------RYSQGLLLVYEFVA--NGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAY 398
+ ++ L+ + A N V Q D L+ +R L Y
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 142
Query: 399 LHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQC 458
+H++DIIHRD+K +N+ ++ + +K+ DFGL+R T T Y PE
Sbjct: 143 IHSADIIHRDLKPSNLAVNEDSELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 198
Query: 459 YQLTDKS-DVYSFGVVLIELIS 479
+ +++ D++S G ++ EL++
Sbjct: 199 WMHYNQTVDIWSVGCIMAELLT 220
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 31/206 (15%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
+G G +G+V K G VAVK+L + ++ E+ +L ++H+N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 347 TS------RYSQGLLLVYEFVA--NGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAY 398
+ ++ L+ + A N V Q D L+ +R L Y
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 160
Query: 399 LHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQG---TPGYVDPEY 455
+H++DIIHRD+K +N+ ++ + +K+ DFGL+R H G T Y PE
Sbjct: 161 IHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMXGXVATRWYRAPEI 213
Query: 456 HQCYQLTDKS-DVYSFGVVLIELISS 480
+ +++ D++S G ++ EL++
Sbjct: 214 MLNWMHYNQTVDIWSVGCIMAELLTG 239
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 65/135 (48%), Gaps = 13/135 (9%)
Query: 354 LLLVYEFVANGTVADQLH--GDRAKHGLLTWPIRMNIAIETASALAYLHASDIIHRDVKT 411
LL+V E + G + ++ GD+A T I A+ YLH+ +I HRDVK
Sbjct: 88 LLIVMECLDGGELFSRIQDRGDQA----FTEREASEIMKSIGEAIQYLHSINIAHRDVKP 143
Query: 412 NNILLDS---NFCVKVADFGLSRLFPLDVTHVS-TAPQGTPGYVDPEYHQCYQLTDKSDV 467
N+L S N +K+ DFG ++ +H S T P TP YV PE + D+
Sbjct: 144 ENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTEPCYTPYYVAPEVLGPEKYDKSCDM 200
Query: 468 YSFGVVLIELISSMP 482
+S GV++ L+ P
Sbjct: 201 WSLGVIMYILLCGYP 215
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 94/202 (46%), Gaps = 25/202 (12%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
+G G +G+V K G VAVK+L + ++ E+ +L ++H+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 347 TS------RYSQGLLLVYEFVA--NGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAY 398
+ ++ L+ + A N V Q D L+ +R L Y
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 140
Query: 399 LHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQC 458
+H++DIIHRD+K +N+ ++ + +K+ DFGL+R T T Y PE
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 196
Query: 459 YQLTDKS-DVYSFGVVLIELIS 479
+ +++ D++S G ++ EL++
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLT 218
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 94/202 (46%), Gaps = 25/202 (12%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
+G G +G+V K G VAVK+L + ++ E+ +L ++H+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 347 TS------RYSQGLLLVYEFVA--NGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAY 398
+ ++ L+ + A N V Q D L+ +R L Y
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 140
Query: 399 LHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQC 458
+H++DIIHRD+K +N+ ++ + +K+ DFGL+R T T Y PE
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 196
Query: 459 YQLTDKS-DVYSFGVVLIELIS 479
+ +++ D++S G ++ EL++
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLT 218
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 94/202 (46%), Gaps = 25/202 (12%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
+G G +G+V K G VAVK+L + ++ E+ +L ++H+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 347 TS------RYSQGLLLVYEFVA--NGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAY 398
+ ++ L+ + A N V Q D L+ +R L Y
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 140
Query: 399 LHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQC 458
+H++DIIHRD+K +N+ ++ + +K+ DFGL+R T T Y PE
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 196
Query: 459 YQLTDKS-DVYSFGVVLIELIS 479
+ +++ D++S G ++ EL++
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLT 218
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 94/202 (46%), Gaps = 25/202 (12%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
+G G +G+V K G VAVK+L + ++ E+ +L ++H+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 347 TS------RYSQGLLLVYEFVA--NGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAY 398
+ ++ L+ + A N V Q D L+ +R L Y
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 140
Query: 399 LHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQC 458
+H++DIIHRD+K +N+ ++ + +K+ DFGL+R T T Y PE
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 196
Query: 459 YQLTDKS-DVYSFGVVLIELIS 479
+ +++ D++S G ++ EL++
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLT 218
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 94/202 (46%), Gaps = 25/202 (12%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
+G G +G+V K G VAVK+L + ++ E+ +L ++H+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 347 TS------RYSQGLLLVYEFVA--NGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAY 398
+ ++ L+ + A N V Q D L+ +R L Y
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 140
Query: 399 LHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQC 458
+H++DIIHRD+K +N+ ++ + +K+ DFGL+R T T Y PE
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 196
Query: 459 YQLTDKS-DVYSFGVVLIELIS 479
+ +++ D++S G ++ EL++
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLT 218
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 94/202 (46%), Gaps = 25/202 (12%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
+G G +G+V K G VAVK+L + ++ E+ +L ++H+N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 347 TS------RYSQGLLLVYEFVA--NGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAY 398
+ ++ L+ + A N V Q D L+ +R L Y
Sbjct: 102 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 152
Query: 399 LHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQC 458
+H++DIIHRD+K +N+ ++ + +K+ DFGL+R T T Y PE
Sbjct: 153 IHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 208
Query: 459 YQLTDKS-DVYSFGVVLIELIS 479
+ +++ D++S G ++ EL++
Sbjct: 209 WMHYNQTVDIWSVGCIMAELLT 230
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 94/202 (46%), Gaps = 25/202 (12%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
+G G +G+V K G VAVK+L + ++ E+ +L ++H+N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 347 TS------RYSQGLLLVYEFVA--NGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAY 398
+ ++ L+ + A N V Q D L+ +R L Y
Sbjct: 102 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 152
Query: 399 LHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQC 458
+H++DIIHRD+K +N+ ++ + +K+ DFGL+R T T Y PE
Sbjct: 153 IHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 208
Query: 459 YQLTDKS-DVYSFGVVLIELIS 479
+ +++ D++S G ++ EL++
Sbjct: 209 WMHYNQTVDIWSVGCIMAELLT 230
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 94/202 (46%), Gaps = 25/202 (12%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
+G G +G+V K G VAVK+L + ++ E+ +L ++H+N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 347 TS------RYSQGLLLVYEFVA--NGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAY 398
+ ++ L+ + A N V Q D L+ +R L Y
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 142
Query: 399 LHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQC 458
+H++DIIHRD+K +N+ ++ + +K+ DFGL+R T T Y PE
Sbjct: 143 IHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 198
Query: 459 YQLTDKS-DVYSFGVVLIELIS 479
+ +++ D++S G ++ EL++
Sbjct: 199 WMHYNQTVDIWSVGCIMAELLT 220
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 94/202 (46%), Gaps = 25/202 (12%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
+G G +G+V K G VAVK+L + ++ E+ +L ++H+N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 347 TS------RYSQGLLLVYEFVA--NGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAY 398
+ ++ L+ + A N V Q D L+ +R L Y
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 147
Query: 399 LHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQC 458
+H++DIIHRD+K +N+ ++ + +K+ DFGL+R T T Y PE
Sbjct: 148 IHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 203
Query: 459 YQLTDKS-DVYSFGVVLIELIS 479
+ +++ D++S G ++ EL++
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLT 225
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 31/206 (15%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
+G G +G+V K G VAVK+L + ++ E+ +L ++H+N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 347 TS------RYSQGLLLVYEFVA--NGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAY 398
+ ++ L+ + A N V Q D L+ +R L Y
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 136
Query: 399 LHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQG---TPGYVDPEY 455
+H++DIIHRD+K +N+ ++ + +K+ DFGL+R H G T Y PE
Sbjct: 137 IHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMAGFVATRWYRAPEI 189
Query: 456 HQCYQLTDKS-DVYSFGVVLIELISS 480
+ +++ D++S G ++ EL++
Sbjct: 190 MLNWMHYNQTVDIWSVGCIMAELLTG 215
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 94/202 (46%), Gaps = 25/202 (12%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
+G G +G+V K G VAVK+L + ++ E+ +L ++H+N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 347 TS------RYSQGLLLVYEFVA--NGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAY 398
+ ++ L+ + A N V Q D L+ +R L Y
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 146
Query: 399 LHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQC 458
+H++DIIHRD+K +N+ ++ + +K+ DFGL+R T T Y PE
Sbjct: 147 IHSADIIHRDLKPSNLAVNEDSELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 202
Query: 459 YQLTDKS-DVYSFGVVLIELIS 479
+ +++ D++S G ++ EL++
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLT 224
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 94/202 (46%), Gaps = 25/202 (12%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
+G G +G+V K G VAVK+L + ++ E+ +L ++H+N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 347 TS------RYSQGLLLVYEFVA--NGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAY 398
+ ++ L+ + A N V Q D L+ +R L Y
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 142
Query: 399 LHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQC 458
+H++DIIHRD+K +N+ ++ + +K+ DFGL+R T T Y PE
Sbjct: 143 IHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 198
Query: 459 YQLTDKS-DVYSFGVVLIELIS 479
+ +++ D++S G ++ EL++
Sbjct: 199 WMHYNQTVDIWSVGCIMAELLT 220
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 94/202 (46%), Gaps = 25/202 (12%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
+G G +G+V K G VAVK+L + ++ E+ +L ++H+N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 347 TS------RYSQGLLLVYEFVA--NGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAY 398
+ ++ L+ + A N V Q D L+ +R L Y
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 142
Query: 399 LHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQC 458
+H++DIIHRD+K +N+ ++ + +K+ DFGL+R T T Y PE
Sbjct: 143 IHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 198
Query: 459 YQLTDKS-DVYSFGVVLIELIS 479
+ +++ D++S G ++ EL++
Sbjct: 199 WMHYNQTVDIWSVGCIMAELLT 220
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 94/202 (46%), Gaps = 25/202 (12%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
+G G +G+V K G VAVK+L + ++ E+ +L ++H+N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 347 TS------RYSQGLLLVYEFVA--NGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAY 398
+ ++ L+ + A N V Q D L+ +R L Y
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 145
Query: 399 LHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQC 458
+H++DIIHRD+K +N+ ++ + +K+ DFGL+R T T Y PE
Sbjct: 146 IHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 201
Query: 459 YQLTDKS-DVYSFGVVLIELIS 479
+ +++ D++S G ++ EL++
Sbjct: 202 WMHYNQTVDIWSVGCIMAELLT 223
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 94/202 (46%), Gaps = 25/202 (12%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
+G G +G+V K G VAVK+L + ++ E+ +L ++H+N++ L
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 88
Query: 347 TS------RYSQGLLLVYEFVA--NGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAY 398
+ ++ L+ + A N V Q D L+ +R L Y
Sbjct: 89 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 139
Query: 399 LHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQC 458
+H++DIIHRD+K +N+ ++ + +K+ DFGL+R T T Y PE
Sbjct: 140 IHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 195
Query: 459 YQLTDKS-DVYSFGVVLIELIS 479
+ +++ D++S G ++ EL++
Sbjct: 196 WMHYNQTVDIWSVGCIMAELLT 217
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 94/202 (46%), Gaps = 25/202 (12%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
+G G +G+V K G VAVK+L + ++ E+ +L ++H+N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 347 TS------RYSQGLLLVYEFVA--NGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAY 398
+ ++ L+ + A N V Q D L+ +R L Y
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 146
Query: 399 LHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQC 458
+H++DIIHRD+K +N+ ++ + +K+ DFGL+R T T Y PE
Sbjct: 147 IHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 202
Query: 459 YQLTDKS-DVYSFGVVLIELIS 479
+ +++ D++S G ++ EL++
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLT 224
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 77/151 (50%), Gaps = 19/151 (12%)
Query: 289 ELGDGGFGTVYYGKLK-DGREVAVKRLYDNNYRRVEQ-------FMNEVEILTRLRHKNL 340
+LG+G + TVY GK K VA+K + R+E + EV +L L+H N+
Sbjct: 9 KLGEGTYATVYKGKSKLTDNLVALKEI------RLEHEEGAPCTAIREVSLLKDLKHANI 62
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
V+L + L LV+E++ + + D + + +++ + + LAY H
Sbjct: 63 VTLHDIIHT-EKSLTLVFEYLDKDL---KQYLDDCGNIINMHNVKLFL-FQLLRGLAYCH 117
Query: 401 ASDIIHRDVKTNNILLDSNFCVKVADFGLSR 431
++HRD+K N+L++ +K+ADFGL+R
Sbjct: 118 RQKVLHRDLKPQNLLINERGELKLADFGLAR 148
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 94/203 (46%), Gaps = 25/203 (12%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
+G G +G+V K G VAVK+L + ++ E+ +L ++H+N++ L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 347 TS------RYSQGLLLVYEFVA--NGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAY 398
+ ++ L+ + A N V Q D L+ +R L Y
Sbjct: 101 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 151
Query: 399 LHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQC 458
+H++DIIHRD+K +N+ ++ + +K+ DFGL+R T T Y PE
Sbjct: 152 IHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 207
Query: 459 YQLTDKS-DVYSFGVVLIELISS 480
+ +++ D++S G ++ EL++
Sbjct: 208 WMHYNQTVDIWSVGCIMAELLTG 230
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 94/202 (46%), Gaps = 25/202 (12%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
+G G +G+V K G VAVK+L + ++ E+ +L ++H+N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 347 TS------RYSQGLLLVYEFVA--NGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAY 398
+ ++ L+ + A N V Q D L+ +R L Y
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 145
Query: 399 LHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQC 458
+H++DIIHRD+K +N+ ++ + +K+ DFGL+R T T Y PE
Sbjct: 146 IHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 201
Query: 459 YQLTDKS-DVYSFGVVLIELIS 479
+ +++ D++S G ++ EL++
Sbjct: 202 WMHYNQTVDIWSVGCIMAELLT 223
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 94/202 (46%), Gaps = 25/202 (12%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
+G G +G+V K G VAVK+L + ++ E+ +L ++H+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 347 TS------RYSQGLLLVYEFVA--NGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAY 398
+ ++ L+ + A N V Q D L+ +R L Y
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 140
Query: 399 LHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQC 458
+H++DIIHRD+K +N+ ++ + +K+ DFGL+R T T Y PE
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 196
Query: 459 YQLTDKS-DVYSFGVVLIELIS 479
+ +++ D++S G ++ EL++
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLT 218
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 107/247 (43%), Gaps = 41/247 (16%)
Query: 258 TDLETGTVYFGV------PIFSYSDL----AEATNDFSREKELGDGGFGTVYYG-KLKDG 306
DL T +YF P F +L E + +G G +G+V K G
Sbjct: 11 VDLGTENLYFQSNASQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTG 70
Query: 307 REVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVSLFGCTS------RYSQGLLLVY 358
VAVK+L + ++ E+ +L ++H+N++ L + ++ L+ +
Sbjct: 71 LRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTH 130
Query: 359 EFVA--NGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDIIHRDVKTNNILL 416
A N V Q D L+ +R L Y+H++DIIHRD+K +N+ +
Sbjct: 131 LMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKYIHSADIIHRDLKPSNLAV 181
Query: 417 DSNFCVKVADFGLSRLFPLDVTHVSTAPQG---TPGYVDPEYHQCYQLTDKS-DVYSFGV 472
+ + +K+ DFGL+R H G T Y PE + +++ D++S G
Sbjct: 182 NEDCELKILDFGLAR-------HTDDEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 234
Query: 473 VLIELIS 479
++ EL++
Sbjct: 235 IMAELLT 241
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 94/202 (46%), Gaps = 25/202 (12%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
+G G +G+V K G VAVK+L + ++ E+ +L ++H+N++ L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 347 TS------RYSQGLLLVYEFVA--NGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAY 398
+ ++ L+ + A N V Q D L+ +R L Y
Sbjct: 87 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 137
Query: 399 LHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQC 458
+H++DIIHRD+K +N+ ++ + +K+ DFGL+R T T Y PE
Sbjct: 138 IHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 193
Query: 459 YQLTDKS-DVYSFGVVLIELIS 479
+ +++ D++S G ++ EL++
Sbjct: 194 WMHYNQTVDIWSVGCIMAELLT 215
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 94/202 (46%), Gaps = 25/202 (12%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
+G G +G+V K G VAVK+L + ++ E+ +L ++H+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 347 TS------RYSQGLLLVYEFVA--NGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAY 398
+ ++ L+ + A N V Q D L+ +R L Y
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 140
Query: 399 LHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQC 458
+H++DIIHRD+K +N+ ++ + +K+ DFGL+R T T Y PE
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 196
Query: 459 YQLTDKS-DVYSFGVVLIELIS 479
+ +++ D++S G ++ EL++
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLT 218
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 94/203 (46%), Gaps = 25/203 (12%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
+G G +G+V K G VAVK+L + ++ E+ +L ++H+N++ L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 347 TS------RYSQGLLLVYEFVA--NGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAY 398
+ ++ L+ + A N V Q D L+ +R L Y
Sbjct: 113 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 163
Query: 399 LHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQC 458
+H++DIIHRD+K +N+ ++ + +K+ DFGL+R T T Y PE
Sbjct: 164 IHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 219
Query: 459 YQLTDKS-DVYSFGVVLIELISS 480
+ +++ D++S G ++ EL++
Sbjct: 220 WMHYNQTVDIWSVGCIMAELLTG 242
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 94/202 (46%), Gaps = 25/202 (12%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
+G G +G+V K G VAVK+L + ++ E+ +L ++H+N++ L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 347 TS------RYSQGLLLVYEFVA--NGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAY 398
+ ++ L+ + A N V Q D L+ +R L Y
Sbjct: 87 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 137
Query: 399 LHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQC 458
+H++DIIHRD+K +N+ ++ + +K+ DFGL+R T T Y PE
Sbjct: 138 IHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 193
Query: 459 YQLTDKS-DVYSFGVVLIELIS 479
+ +++ D++S G ++ EL++
Sbjct: 194 WMHYNQTVDIWSVGCIMAELLT 215
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 94/202 (46%), Gaps = 25/202 (12%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
+G G +G+V K G VAVK+L + ++ E+ +L ++H+N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 347 TS------RYSQGLLLVYEFVA--NGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAY 398
+ ++ L+ + A N V Q D L+ +R L Y
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 146
Query: 399 LHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQC 458
+H++DIIHRD+K +N+ ++ + +K+ DFGL+R T T Y PE
Sbjct: 147 IHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 202
Query: 459 YQLTDKS-DVYSFGVVLIELIS 479
+ +++ D++S G ++ EL++
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLT 224
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 94/203 (46%), Gaps = 25/203 (12%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
+G G +G+V K G VAVK+L + ++ E+ +L ++H+N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 347 TS------RYSQGLLLVYEFVA--NGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAY 398
+ ++ L+ + A N V Q D L+ +R L Y
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 160
Query: 399 LHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQC 458
+H++DIIHRD+K +N+ ++ + +K+ DFGL+R T T Y PE
Sbjct: 161 IHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 216
Query: 459 YQLTDKS-DVYSFGVVLIELISS 480
+ +++ D++S G ++ EL++
Sbjct: 217 WMHYNQTVDIWSVGCIMAELLTG 239
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 94/203 (46%), Gaps = 25/203 (12%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
+G G +G+V K G VAVK+L + ++ E+ +L ++H+N++ L
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 347 TS------RYSQGLLLVYEFVA--NGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAY 398
+ ++ L+ + A N V Q D L+ +R L Y
Sbjct: 109 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 159
Query: 399 LHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQC 458
+H++DIIHRD+K +N+ ++ + +K+ DFGL+R T T Y PE
Sbjct: 160 IHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 215
Query: 459 YQLTDKS-DVYSFGVVLIELISS 480
+ +++ D++S G ++ EL++
Sbjct: 216 WMHYNQTVDIWSVGCIMAELLTG 238
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 94/202 (46%), Gaps = 25/202 (12%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
+G G +G+V K G VAVK+L + ++ E+ +L ++H+N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 347 TS------RYSQGLLLVYEFVA--NGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAY 398
+ ++ L+ + A N V Q D L+ +R L Y
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 136
Query: 399 LHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQC 458
+H++DIIHRD+K +N+ ++ + +K+ DFGL+R T T Y PE
Sbjct: 137 IHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 192
Query: 459 YQLTDKS-DVYSFGVVLIELIS 479
+ +++ D++S G ++ EL++
Sbjct: 193 WMHYNQTVDIWSVGCIMAELLT 214
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 94/203 (46%), Gaps = 25/203 (12%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
+G G +G+V K G VAVK+L + ++ E+ +L ++H+N++ L
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 87
Query: 347 TS------RYSQGLLLVYEFVA--NGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAY 398
+ ++ L+ + A N V Q D L+ +R L Y
Sbjct: 88 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 138
Query: 399 LHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQC 458
+H++DIIHRD+K +N+ ++ + +K+ DFGL+R T T Y PE
Sbjct: 139 IHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIMLN 194
Query: 459 YQLTDKS-DVYSFGVVLIELISS 480
+ +++ D++S G ++ EL++
Sbjct: 195 WMHYNQTVDIWSVGCIMAELLTG 217
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 96/208 (46%), Gaps = 37/208 (17%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
+G G +G+V K G VAVK+L + ++ E+ +L ++H+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 347 TS------RYSQGLLLVYEFVA--NGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAY 398
+ ++ L+ + A N V Q D L+ +R L Y
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 140
Query: 399 LHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQC 458
+H++DIIHRD+K +N+ ++ + +K+ DFGL+R ++T GYV +++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYVATRWYRA 190
Query: 459 YQLT-------DKSDVYSFGVVLIELIS 479
++ D++S G ++ EL++
Sbjct: 191 PEIMLNAMHYNQTVDIWSVGCIMAELLT 218
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 4/96 (4%)
Query: 388 IAIETASALAYLHASDIIHRDVKTNNILL---DSNFCVKVADFGLSRLFPLDVTHVSTAP 444
I + SA++++H ++HRD+K N+L + N +K+ DFG +RL P D + T P
Sbjct: 111 IMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKT-P 169
Query: 445 QGTPGYVDPEYHQCYQLTDKSDVYSFGVVLIELISS 480
T Y PE + D++S GV+L ++S
Sbjct: 170 CFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSG 205
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 96/211 (45%), Gaps = 41/211 (19%)
Query: 288 KELGDGGFGTV---YYGKLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVS 342
+ +G G +G+V Y +L+ ++VAVK+L + + E+ +L L+H+N++
Sbjct: 26 RPVGSGAYGSVCSAYDARLR--QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIG 83
Query: 343 LFGC------TSRYSQGLLLVYEFVA--NGTVADQLHGDRAKHGLLTWPIRMNIAIETAS 394
L +S+ L+ A N V Q D L+ +R
Sbjct: 84 LLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLR--------- 134
Query: 395 ALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPE 454
L Y+H++ IIHRD+K +N+ ++ + +++ DFGL+R A + GYV
Sbjct: 135 GLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLAR----------QADEEMTGYVATR 184
Query: 455 YHQCYQLT-------DKSDVYSFGVVLIELI 478
+++ ++ D++S G ++ EL+
Sbjct: 185 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 215
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 96/211 (45%), Gaps = 41/211 (19%)
Query: 288 KELGDGGFGTV---YYGKLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVS 342
+ +G G +G+V Y +L+ ++VAVK+L + + E+ +L L+H+N++
Sbjct: 34 RPVGSGAYGSVCSAYDARLR--QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIG 91
Query: 343 LFGC------TSRYSQGLLLVYEFVA--NGTVADQLHGDRAKHGLLTWPIRMNIAIETAS 394
L +S+ L+ A N V Q D L+ +R
Sbjct: 92 LLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLR--------- 142
Query: 395 ALAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPE 454
L Y+H++ IIHRD+K +N+ ++ + +++ DFGL+R A + GYV
Sbjct: 143 GLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLAR----------QADEEMTGYVATR 192
Query: 455 YHQCYQLT-------DKSDVYSFGVVLIELI 478
+++ ++ D++S G ++ EL+
Sbjct: 193 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 223
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 101/203 (49%), Gaps = 19/203 (9%)
Query: 282 NDFSREKELGDGGFGTVYYG-KLKDGREVAVKRLYDNNYRRVEQFMNEVEILTRLRHK-N 339
+D+ ++LG G + V+ + + +V VK L ++++ E++IL LR N
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKNKIKR---EIKILENLRGGPN 93
Query: 340 LVSLFGCTSR-YSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAY 398
+++L S+ LV+E V N T QL+ L + IR + E AL Y
Sbjct: 94 IITLADIVKDPVSRTPALVFEHV-NNTDFKQLY-----QTLTDYDIRFYMY-EILKALDY 146
Query: 399 LHASDIIHRDVKTNNILLDSNF-CVKVADFGLSRLF-PLDVTHVSTAPQGTPGYVDPEYH 456
H+ I+HRDVK +N+++D +++ D+GL+ + P +V A + G PE
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG---PELL 203
Query: 457 QCYQLTDKS-DVYSFGVVLIELI 478
YQ+ D S D++S G +L +I
Sbjct: 204 VDYQMYDYSLDMWSLGCMLASMI 226
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 103/203 (50%), Gaps = 22/203 (10%)
Query: 288 KELGDGGFGTVYYGKLKDGREVAVKRLYDNNYRRV---EQFM--NEVEILTRLRHKNLVS 342
++LG G FG V+ E + K+ Y + +V +Q + E+ IL RH+N++
Sbjct: 11 EDLGRGEFGIVH-----RCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILH 65
Query: 343 LFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHAS 402
L + L++++EF++ + ++++ + L ++ + AL +LH+
Sbjct: 66 LHESFESMEE-LVMIFEFISGLDIFERINTSAFE---LNEREIVSYVHQVCEALQFLHSH 121
Query: 403 DIIHRDVKTNNILLDS--NFCVKVADFGLSR-LFPLD-VTHVSTAPQGTPGYVDPEYHQC 458
+I H D++ NI+ + + +K+ +FG +R L P D + TAP+ Y PE HQ
Sbjct: 122 NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPE----YYAPEVHQH 177
Query: 459 YQLTDKSDVYSFGVVLIELISSM 481
++ +D++S G ++ L+S +
Sbjct: 178 DVVSTATDMWSLGTLVYVLLSGI 200
>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2
pdb|2V62|B Chain B, Structure Of Vaccinia-Related Kinase 2
Length = 345
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 93/244 (38%), Gaps = 23/244 (9%)
Query: 258 TDLETGTVYFGVPIFSYSDLAE--ATNDFSREKELGDGGFGTVYYGKLKDGREVAVKRLY 315
DL T +YF F + + N + K++G GGFG +Y + E + +
Sbjct: 11 VDLGTENLYFQSMPFPEGKVLDDMEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVV 70
Query: 316 DNNYRRVEQFMNEVEILTRLRHKNLVS---------LFGCTSRYSQGLLLV----YEFVA 362
Y+ +E++ R+ K+ + G Y GL Y F+
Sbjct: 71 KVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMV 130
Query: 363 NGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASDIIHRDVKTNNILLDSNF-- 420
+ L ++G + + I L Y+H ++ +H D+K N+LL
Sbjct: 131 MERLGIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPD 190
Query: 421 CVKVADFGLSRLFPLDVTHVS------TAPQGTPGYVDPEYHQCYQLTDKSDVYSFGVVL 474
V +AD+GLS + + H GT + + H+ L+ +SDV G +
Sbjct: 191 QVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCM 250
Query: 475 IELI 478
+ +
Sbjct: 251 LRWL 254
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 63/135 (46%), Gaps = 13/135 (9%)
Query: 354 LLLVYEFVANGTVADQLH--GDRAKHGLLTWPIRMNIAIETASALAYLHASDIIHRDVKT 411
LL+V E + G + ++ GD+A T I A+ YLH+ +I HRDVK
Sbjct: 134 LLIVXECLDGGELFSRIQDRGDQA----FTEREASEIXKSIGEAIQYLHSINIAHRDVKP 189
Query: 412 NNILLDS---NFCVKVADFGLSRLFPLDVTHVS-TAPQGTPGYVDPEYHQCYQLTDKSDV 467
N+L S N +K+ DFG ++ +H S T P TP YV PE + D
Sbjct: 190 ENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDX 246
Query: 468 YSFGVVLIELISSMP 482
+S GV+ L+ P
Sbjct: 247 WSLGVIXYILLCGYP 261
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 18/200 (9%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYDNNYRRVEQFMN------EVEILTRLRH--KNL 340
LG GGFG+VY G ++ D VA+K + + + N EV +L ++ +
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 75
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
+ L R +L++ + D + + G L + + + A+ + H
Sbjct: 76 IRLLDWFERPDSFVLILERMEPVQDLFDFI----TERGALQEELARSFFWQVLEAVRHCH 131
Query: 401 ASDIIHRDVKTNNILLDSNFC-VKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCY 459
++HRD+K NIL+D N +K+ DFG L V T GT Y PE+ + +
Sbjct: 132 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEWIRYH 188
Query: 460 QLTDKS-DVYSFGVVLIELI 478
+ +S V+S G++L +++
Sbjct: 189 RYHGRSAAVWSLGILLYDMV 208
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 94/202 (46%), Gaps = 25/202 (12%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
+G G +G+V K G VAVK+L + ++ E+ +L ++H+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 347 TS------RYSQGLLLVYEFVA--NGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAY 398
+ ++ L+ + A N V Q D L+ +R L Y
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 140
Query: 399 LHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQC 458
+H++DIIHRD+K +N+ ++ + +K+ D+GL+R T T Y PE
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDYGLAR----HTDDEMTGYVATRWYRAPEIMLN 196
Query: 459 YQLTDKS-DVYSFGVVLIELIS 479
+ +++ D++S G ++ EL++
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLT 218
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 79/163 (48%), Gaps = 9/163 (5%)
Query: 323 EQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLL-LVYEFVANGTVADQLHGDRAKHGLL- 380
E E I L+H ++V L S S G+L +V+EF+ + ++ RA G +
Sbjct: 73 EDLKREASICHMLKHPHIVELLETYS--SDGMLYMVFEFMDGADLCFEIV-KRADAGFVY 129
Query: 381 TWPIRMNIAIETASALAYLHASDIIHRDVKTNNILLDS---NFCVKVADFGLSRLFPLDV 437
+ + + + AL Y H ++IIHRDVK + +LL S + VK+ FG++ +
Sbjct: 130 SEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLG-ES 188
Query: 438 THVSTAPQGTPGYVDPEYHQCYQLTDKSDVYSFGVVLIELISS 480
V+ GTP ++ PE + DV+ GV+L L+S
Sbjct: 189 GLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 231
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 79/163 (48%), Gaps = 9/163 (5%)
Query: 323 EQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLL-LVYEFVANGTVADQLHGDRAKHGLL- 380
E E I L+H ++V L S S G+L +V+EF+ + ++ RA G +
Sbjct: 71 EDLKREASICHMLKHPHIVELLETYS--SDGMLYMVFEFMDGADLCFEI-VKRADAGFVY 127
Query: 381 TWPIRMNIAIETASALAYLHASDIIHRDVKTNNILLDS---NFCVKVADFGLSRLFPLDV 437
+ + + + AL Y H ++IIHRDVK + +LL S + VK+ FG++ +
Sbjct: 128 SEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLG-ES 186
Query: 438 THVSTAPQGTPGYVDPEYHQCYQLTDKSDVYSFGVVLIELISS 480
V+ GTP ++ PE + DV+ GV+L L+S
Sbjct: 187 GLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 78/175 (44%), Gaps = 28/175 (16%)
Query: 328 EVEILTRLRHKNLVSLFGC-TSRYSQGLLLVYEFVANGT--VADQLHGDRAKHGLLTWPI 384
E+ +L L+H N++SL S + + L++++ + + +A + P
Sbjct: 68 EIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPR 127
Query: 385 RM--NIAIETASALAYLHASDIIHRDVKTNNILL----DSNFCVKVADFGLSRLF----- 433
M ++ + + YLHA+ ++HRD+K NIL+ VK+AD G +RLF
Sbjct: 128 GMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLK 187
Query: 434 ------PLDVTHVSTAPQGTPGYVDPEYHQCYQLTDKSDVYSFGVVLIELISSMP 482
P+ VT AP+ G T D+++ G + EL++S P
Sbjct: 188 PLADLDPVVVTFWYRAPELLLG--------ARHYTKAIDIWAIGCIFAELLTSEP 234
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 96/215 (44%), Gaps = 25/215 (11%)
Query: 280 ATNDFSREKE-LGDGGFGTVYY-GKLKDGREVAVKRLYDNNYRRVE-----QFMNEVEIL 332
T+D+ K+ LG G G V + G++ A+K LYD+ R E Q I+
Sbjct: 7 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGGPHIV 66
Query: 333 TRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLH--GDRAKHGLLTWPIRMNIAI 390
++ ++ + LL++ E + G + ++ GD+A T I
Sbjct: 67 C------ILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQA----FTEREAAEIMR 116
Query: 391 ETASALAYLHASDIIHRDVKTNNILLDS---NFCVKVADFGLSRLFPLDVTHVSTAPQGT 447
+ +A+ +LH+ +I HRDVK N+L S + +K+ DFG ++ + P T
Sbjct: 117 DIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK---ETTQNALQTPCYT 173
Query: 448 PGYVDPEYHQCYQLTDKSDVYSFGVVLIELISSMP 482
P YV PE + D++S GV++ L+ P
Sbjct: 174 PYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFP 208
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 96/215 (44%), Gaps = 25/215 (11%)
Query: 280 ATNDFSREKE-LGDGGFGTVYY-GKLKDGREVAVKRLYDNNYRRVE-----QFMNEVEIL 332
T+D+ K+ LG G G V + G++ A+K LYD+ R E Q I+
Sbjct: 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGGPHIV 85
Query: 333 TRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLH--GDRAKHGLLTWPIRMNIAI 390
++ ++ + LL++ E + G + ++ GD+A T I
Sbjct: 86 C------ILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQA----FTEREAAEIMR 135
Query: 391 ETASALAYLHASDIIHRDVKTNNILLDS---NFCVKVADFGLSRLFPLDVTHVSTAPQGT 447
+ +A+ +LH+ +I HRDVK N+L S + +K+ DFG ++ + P T
Sbjct: 136 DIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK---ETTQNALQTPCYT 192
Query: 448 PGYVDPEYHQCYQLTDKSDVYSFGVVLIELISSMP 482
P YV PE + D++S GV++ L+ P
Sbjct: 193 PYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFP 227
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 103/222 (46%), Gaps = 39/222 (17%)
Query: 284 FSREKELGDGGFGTVYYGKLKD-GREVAVKR-LYDNNYRRVE-QFMNEVEILTRLRHKNL 340
F E+ G G FGTV GK K G VA+K+ + D +R E Q M ++ + L H N+
Sbjct: 25 FQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAV---LHHPNI 81
Query: 341 VSL------FGCTSRYSQGLLLVYEFVANGTVADQLH---GDRAKHGLLTWPIRMNIAI- 390
V L G R L +V E+ V D LH + + + PI + + +
Sbjct: 82 VQLQSYFYTLGERDRRDIYLNVVMEY-----VPDTLHRCCRNYYRRQVAPPPILIKVFLF 136
Query: 391 ETASALAYLH--ASDIIHRDVKTNNILL-DSNFCVKVADFGLSRLFPLDVTHVSTAPQGT 447
+ ++ LH + ++ HRD+K +N+L+ +++ +K+ DFG ++ +V+
Sbjct: 137 QLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVA------ 190
Query: 448 PGYVDPEYHQCYQL-------TDKSDVYSFGVVLIELISSMP 482
Y+ Y++ +L T D++S G + E++ P
Sbjct: 191 --YICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEP 230
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 18/200 (9%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYDNNYRRVEQFMN------EVEILTRLRH--KNL 340
LG GGFG+VY G ++ D VA+K + + + N EV +L ++ +
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 90
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
+ L R +L++ + D + + G L + + + A+ + H
Sbjct: 91 IRLLDWFERPDSFVLILERPEPVQDLFDFI----TERGALQEELARSFFWQVLEAVRHCH 146
Query: 401 ASDIIHRDVKTNNILLDSNFC-VKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCY 459
++HRD+K NIL+D N +K+ DFG L V T GT Y PE+ + +
Sbjct: 147 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEWIRYH 203
Query: 460 QLTDKS-DVYSFGVVLIELI 478
+ +S V+S G++L +++
Sbjct: 204 RYHGRSAAVWSLGILLYDMV 223
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 18/200 (9%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYDNNYRRVEQFMN------EVEILTRLRH--KNL 340
LG GGFG+VY G ++ D VA+K + + + N EV +L ++ +
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 90
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
+ L R +L++ + D + + G L + + + A+ + H
Sbjct: 91 IRLLDWFERPDSFVLILERPEPVQDLFDFI----TERGALQEELARSFFWQVLEAVRHCH 146
Query: 401 ASDIIHRDVKTNNILLDSNFC-VKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCY 459
++HRD+K NIL+D N +K+ DFG L V T GT Y PE+ + +
Sbjct: 147 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEWIRYH 203
Query: 460 QLTDKS-DVYSFGVVLIELI 478
+ +S V+S G++L +++
Sbjct: 204 RYHGRSAAVWSLGILLYDMV 223
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 18/200 (9%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYDNNYRRVEQFMN------EVEILTRLRH--KNL 340
LG GGFG+VY G ++ D VA+K + + + N EV +L ++ +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
+ L R +L++ + D + + G L + + + A+ + H
Sbjct: 105 IRLLDWFERPDSFVLILERPEPVQDLFDFI----TERGALQEELARSFFWQVLEAVRHCH 160
Query: 401 ASDIIHRDVKTNNILLDSNFC-VKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCY 459
++HRD+K NIL+D N +K+ DFG L V T GT Y PE+ + +
Sbjct: 161 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEWIRYH 217
Query: 460 QLTDKS-DVYSFGVVLIELI 478
+ +S V+S G++L +++
Sbjct: 218 RYHGRSAAVWSLGILLYDMV 237
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 79/183 (43%), Gaps = 12/183 (6%)
Query: 282 NDFSREKELGDGGFGTVYYGKLKDGREVAVKRL---YDNNYR-RVEQFMNEVEILTRLRH 337
+DF K +G G F V K+K +V ++ +D R V F E ++L
Sbjct: 61 DDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDR 120
Query: 338 KNLVSLFGCTSRYSQGLLLVYEFVANGTVADQL--HGDRAKHGLLTWPIRMNIAIETASA 395
+ + L + L LV E+ G + L G+R + R +A E A
Sbjct: 121 RWITQLH-FAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEM----ARFYLA-EIVMA 174
Query: 396 LAYLHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEY 455
+ +H +HRD+K +NILLD +++ADFG D T S GTP Y+ PE
Sbjct: 175 IDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEI 234
Query: 456 HQC 458
Q
Sbjct: 235 LQA 237
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 93/202 (46%), Gaps = 25/202 (12%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
+G G +G+V K G VAVK+L + ++ E+ +L ++H+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 347 TS------RYSQGLLLVYEFVA--NGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAY 398
+ ++ L+ + A N V Q D L+ +R L Y
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 140
Query: 399 LHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQC 458
+H++DIIHRD+K +N+ ++ + +K+ FGL+R T T Y PE
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILGFGLAR----HTDDEMTGYVATRWYRAPEIMLN 196
Query: 459 YQLTDKS-DVYSFGVVLIELIS 479
+ +++ D++S G ++ EL++
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLT 218
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 18/200 (9%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYDNNYRRVEQFMN------EVEILTRLRH--KNL 340
LG GGFG+VY G ++ D VA+K + + + N EV +L ++ +
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
+ L R +L++ + D + + G L + + + A+ + H
Sbjct: 92 IRLLDWFERPDSFVLILERPEPVQDLFDFI----TERGALQEELARSFFWQVLEAVRHCH 147
Query: 401 ASDIIHRDVKTNNILLDSNFC-VKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCY 459
++HRD+K NIL+D N +K+ DFG L V T GT Y PE+ + +
Sbjct: 148 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEWIRYH 204
Query: 460 QLTDKS-DVYSFGVVLIELI 478
+ +S V+S G++L +++
Sbjct: 205 RYHGRSAAVWSLGILLYDMV 224
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 18/200 (9%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYDNNYRRVEQFMN------EVEILTRLRH--KNL 340
LG GGFG+VY G ++ D VA+K + + + N EV +L ++ +
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 75
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
+ L R +L++ + D + + G L + + + A+ + H
Sbjct: 76 IRLLDWFERPDSFVLILERPEPVQDLFDFI----TERGALQEELARSFFWQVLEAVRHCH 131
Query: 401 ASDIIHRDVKTNNILLDSNFC-VKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCY 459
++HRD+K NIL+D N +K+ DFG L V T GT Y PE+ + +
Sbjct: 132 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEWIRYH 188
Query: 460 QLTDKS-DVYSFGVVLIELI 478
+ +S V+S G++L +++
Sbjct: 189 RYHGRSAAVWSLGILLYDMV 208
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 18/200 (9%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYDNNYRRVEQFMN------EVEILTRLRH--KNL 340
LG GGFG+VY G ++ D VA+K + + + N EV +L ++ +
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
+ L R +L++ + D + + G L + + + A+ + H
Sbjct: 92 IRLLDWFERPDSFVLILERPEPVQDLFDFI----TERGALQEELARSFFWQVLEAVRHCH 147
Query: 401 ASDIIHRDVKTNNILLDSNFC-VKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCY 459
++HRD+K NIL+D N +K+ DFG L V T GT Y PE+ + +
Sbjct: 148 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEWIRYH 204
Query: 460 QLTDKS-DVYSFGVVLIELI 478
+ +S V+S G++L +++
Sbjct: 205 RYHGRSAAVWSLGILLYDMV 224
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 18/200 (9%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYDNNYRRVEQFMN------EVEILTRLRH--KNL 340
LG GGFG+VY G ++ D VA+K + + + N EV +L ++ +
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
+ L R +L++ + D + + G L + + + A+ + H
Sbjct: 92 IRLLDWFERPDSFVLILERPEPVQDLFDFI----TERGALQEELARSFFWQVLEAVRHCH 147
Query: 401 ASDIIHRDVKTNNILLDSNFC-VKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCY 459
++HRD+K NIL+D N +K+ DFG L V T GT Y PE+ + +
Sbjct: 148 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEWIRYH 204
Query: 460 QLTDKS-DVYSFGVVLIELI 478
+ +S V+S G++L +++
Sbjct: 205 RYHGRSAAVWSLGILLYDMV 224
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 18/200 (9%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYDNNYRRVEQFMN------EVEILTRLRH--KNL 340
LG GGFG+VY G ++ D VA+K + + + N EV +L ++ +
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 118
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
+ L R +L++ + D + + G L + + + A+ + H
Sbjct: 119 IRLLDWFERPDSFVLILERPEPVQDLFDFI----TERGALQEELARSFFWQVLEAVRHCH 174
Query: 401 ASDIIHRDVKTNNILLDSNFC-VKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCY 459
++HRD+K NIL+D N +K+ DFG L V T GT Y PE+ + +
Sbjct: 175 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEWIRYH 231
Query: 460 QLTDKS-DVYSFGVVLIELI 478
+ +S V+S G++L +++
Sbjct: 232 RYHGRSAAVWSLGILLYDMV 251
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 18/200 (9%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYDNNYRRVEQFMN------EVEILTRLRH--KNL 340
LG GGFG+VY G ++ D VA+K + + + N EV +L ++ +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
+ L R +L++ + D + + G L + + + A+ + H
Sbjct: 77 IRLLDWFERPDSFVLILERPEPVQDLFDFI----TERGALQEELARSFFWQVLEAVRHCH 132
Query: 401 ASDIIHRDVKTNNILLDSNFC-VKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCY 459
++HRD+K NIL+D N +K+ DFG L V T GT Y PE+ + +
Sbjct: 133 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEWIRYH 189
Query: 460 QLTDKS-DVYSFGVVLIELI 478
+ +S V+S G++L +++
Sbjct: 190 RYHGRSAAVWSLGILLYDMV 209
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 18/200 (9%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYDNNYRRVEQFMN------EVEILTRLRH--KNL 340
LG GGFG+VY G ++ D VA+K + + + N EV +L ++ +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
+ L R +L++ + D + + G L + + + A+ + H
Sbjct: 77 IRLLDWFERPDSFVLILERPEPVQDLFDFI----TERGALQEELARSFFWQVLEAVRHCH 132
Query: 401 ASDIIHRDVKTNNILLDSNFC-VKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCY 459
++HRD+K NIL+D N +K+ DFG L V T GT Y PE+ + +
Sbjct: 133 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEWIRYH 189
Query: 460 QLTDKS-DVYSFGVVLIELI 478
+ +S V+S G++L +++
Sbjct: 190 RYHGRSAAVWSLGILLYDMV 209
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 18/200 (9%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYDNNYRRVEQFMN------EVEILTRLRH--KNL 340
LG GGFG+VY G ++ D VA+K + + + N EV +L ++ +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
+ L R +L++ + D + + G L + + + A+ + H
Sbjct: 105 IRLLDWFERPDSFVLILERPEPVQDLFDFI----TERGALQEELARSFFWQVLEAVRHCH 160
Query: 401 ASDIIHRDVKTNNILLDSNFC-VKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCY 459
++HRD+K NIL+D N +K+ DFG L V T GT Y PE+ + +
Sbjct: 161 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEWIRYH 217
Query: 460 QLTDKS-DVYSFGVVLIELI 478
+ +S V+S G++L +++
Sbjct: 218 RYHGRSAAVWSLGILLYDMV 237
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 93/202 (46%), Gaps = 25/202 (12%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
+G G +G+V K G VAVK+L + ++ E+ +L ++H+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 347 TS------RYSQGLLLVYEFVA--NGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAY 398
+ ++ L+ + A N V Q D L+ +R L Y
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 140
Query: 399 LHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQC 458
+H++DIIHRD+K +N+ ++ + +K+ DF L+R T T Y PE
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFYLAR----HTDDEMTGYVATRWYRAPEIMLN 196
Query: 459 YQLTDKS-DVYSFGVVLIELIS 479
+ +++ D++S G ++ EL++
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLT 218
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 18/200 (9%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYDNNYRRVEQFMN------EVEILTRLRH--KNL 340
LG GGFG+VY G ++ D VA+K + + + N EV +L ++ +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
+ L R +L++ + D + + G L + + + A+ + H
Sbjct: 104 IRLLDWFERPDSFVLILERPEPVQDLFDFI----TERGALQEELARSFFWQVLEAVRHCH 159
Query: 401 ASDIIHRDVKTNNILLDSNFC-VKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCY 459
++HRD+K NIL+D N +K+ DFG L V T GT Y PE+ + +
Sbjct: 160 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEWIRYH 216
Query: 460 QLTDKS-DVYSFGVVLIELI 478
+ +S V+S G++L +++
Sbjct: 217 RYHGRSAAVWSLGILLYDMV 236
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 18/200 (9%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYDNNYRRVEQFMN------EVEILTRLRH--KNL 340
LG GGFG+VY G ++ D VA+K + + + N EV +L ++ +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
+ L R +L++ + D + + G L + + + A+ + H
Sbjct: 77 IRLLDWFERPDSFVLILERPEPVQDLFDFI----TERGALQEELARSFFWQVLEAVRHCH 132
Query: 401 ASDIIHRDVKTNNILLDSNFC-VKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCY 459
++HRD+K NIL+D N +K+ DFG L V T GT Y PE+ + +
Sbjct: 133 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEWIRYH 189
Query: 460 QLTDKS-DVYSFGVVLIELI 478
+ +S V+S G++L +++
Sbjct: 190 RYHGRSAAVWSLGILLYDMV 209
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 18/200 (9%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYDNNYRRVEQFMN------EVEILTRLRH--KNL 340
LG GGFG+VY G ++ D VA+K + + + N EV +L ++ +
Sbjct: 51 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 110
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
+ L R +L++ + D + + G L + + + A+ + H
Sbjct: 111 IRLLDWFERPDSFVLILERPEPVQDLFDFI----TERGALQEELARSFFWQVLEAVRHCH 166
Query: 401 ASDIIHRDVKTNNILLDSNFC-VKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCY 459
++HRD+K NIL+D N +K+ DFG L V T GT Y PE+ + +
Sbjct: 167 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEWIRYH 223
Query: 460 QLTDKS-DVYSFGVVLIELI 478
+ +S V+S G++L +++
Sbjct: 224 RYHGRSAAVWSLGILLYDMV 243
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 101/238 (42%), Gaps = 28/238 (11%)
Query: 260 LETGTVYFGVPIFSYSDLAEATNDFSREKELGDGGFGTVYYG-KLKDGREVAVKRLYDNN 318
LE T G S + A + + + R +LG+G +G VY VA+KR+
Sbjct: 12 LEAQTQGPGSMSVSAAPSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRI---- 67
Query: 319 YRRVEQ--------FMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQL 370
R+E + EV +L L+H+N++ L ++ L L++E+ N L
Sbjct: 68 --RLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVI-HHNHRLHLIFEYAEN-----DL 119
Query: 371 HGDRAKHGLLTWPIRMNIAIETASALAYLHASDIIHRDVKTNNILL-----DSNFCVKVA 425
K+ ++ + + + + + + H+ +HRD+K N+LL +K+
Sbjct: 120 KKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIG 179
Query: 426 DFGLSRLFPLDVTHVSTAPQGTPGYVDPE-YHQCYQLTDKSDVYSFGVVLIELISSMP 482
DFGL+R F + + T T Y PE + D++S + E++ P
Sbjct: 180 DFGLARAFGIPIRQF-THEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTP 236
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 18/200 (9%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYDNNYRRVEQFMN------EVEILTRLRH--KNL 340
LG GGFG+VY G ++ D VA+K + + + N EV +L ++ +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
+ L R +L++ + D + + G L + + + A+ + H
Sbjct: 105 IRLLDWFERPDSFVLILERPEPVQDLFDFI----TERGALQEELARSFFWQVLEAVRHCH 160
Query: 401 ASDIIHRDVKTNNILLDSNFC-VKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCY 459
++HRD+K NIL+D N +K+ DFG L V T GT Y PE+ + +
Sbjct: 161 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEWIRYH 217
Query: 460 QLTDKS-DVYSFGVVLIELI 478
+ +S V+S G++L +++
Sbjct: 218 RYHGRSAAVWSLGILLYDMV 237
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 18/200 (9%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYDNNYRRVEQFMN------EVEILTRLRH--KNL 340
LG GGFG+VY G ++ D VA+K + + + N EV +L ++ +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
+ L R +L++ + D + + G L + + + A+ + H
Sbjct: 104 IRLLDWFERPDSFVLILERPEPVQDLFDFI----TERGALQEELARSFFWQVLEAVRHCH 159
Query: 401 ASDIIHRDVKTNNILLDSNFC-VKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCY 459
++HRD+K NIL+D N +K+ DFG L V T GT Y PE+ + +
Sbjct: 160 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEWIRYH 216
Query: 460 QLTDKS-DVYSFGVVLIELI 478
+ +S V+S G++L +++
Sbjct: 217 RYHGRSAAVWSLGILLYDMV 236
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 18/200 (9%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYDNNYRRVEQFMN------EVEILTRLRH--KNL 340
LG GGFG+VY G ++ D VA+K + + + N EV +L ++ +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
+ L R +L++ + D + + G L + + + A+ + H
Sbjct: 104 IRLLDWFERPDSFVLILERPEPVQDLFDFI----TERGALQEELARSFFWQVLEAVRHCH 159
Query: 401 ASDIIHRDVKTNNILLDSNFC-VKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCY 459
++HRD+K NIL+D N +K+ DFG L V T GT Y PE+ + +
Sbjct: 160 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEWIRYH 216
Query: 460 QLTDKS-DVYSFGVVLIELI 478
+ +S V+S G++L +++
Sbjct: 217 RYHGRSAAVWSLGILLYDMV 236
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 18/200 (9%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYDNNYRRVEQFMN------EVEILTRLRH--KNL 340
LG GGFG+VY G ++ D VA+K + + + N EV +L ++ +
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 118
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
+ L R +L++ + D + + G L + + + A+ + H
Sbjct: 119 IRLLDWFERPDSFVLILERPEPVQDLFDFI----TERGALQEELARSFFWQVLEAVRHCH 174
Query: 401 ASDIIHRDVKTNNILLDSNFC-VKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCY 459
++HRD+K NIL+D N +K+ DFG L V T GT Y PE+ + +
Sbjct: 175 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEWIRYH 231
Query: 460 QLTDKS-DVYSFGVVLIELI 478
+ +S V+S G++L +++
Sbjct: 232 RYHGRSAAVWSLGILLYDMV 251
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 18/200 (9%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYDNNYRRVEQFMN------EVEILTRLRH--KNL 340
LG GGFG+VY G ++ D VA+K + + + N EV +L ++ +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
+ L R +L++ + D + + G L + + + A+ + H
Sbjct: 104 IRLLDWFERPDSFVLILERPEPVQDLFDFI----TERGALQEELARSFFWQVLEAVRHCH 159
Query: 401 ASDIIHRDVKTNNILLDSNFC-VKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCY 459
++HRD+K NIL+D N +K+ DFG L V T GT Y PE+ + +
Sbjct: 160 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEWIRYH 216
Query: 460 QLTDKS-DVYSFGVVLIELI 478
+ +S V+S G++L +++
Sbjct: 217 RYHGRSAAVWSLGILLYDMV 236
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 18/200 (9%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYDNNYRRVEQFMN------EVEILTRLRH--KNL 340
LG GGFG+VY G ++ D VA+K + + + N EV +L ++ +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
+ L R +L++ + D + + G L + + + A+ + H
Sbjct: 105 IRLLDWFERPDSFVLILERPEPVQDLFDFI----TERGALQEELARSFFWQVLEAVRHCH 160
Query: 401 ASDIIHRDVKTNNILLDSNFC-VKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCY 459
++HRD+K NIL+D N +K+ DFG L V T GT Y PE+ + +
Sbjct: 161 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEWIRYH 217
Query: 460 QLTDKS-DVYSFGVVLIELI 478
+ +S V+S G++L +++
Sbjct: 218 RYHGRSAAVWSLGILLYDMV 237
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 18/200 (9%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYDNNYRRVEQFMN------EVEILTRLR--HKNL 340
LG GGFG+VY G ++ D VA+K + + + N EV +L ++ +
Sbjct: 15 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 74
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
+ L R +L++ + D + + G L + + + A+ + H
Sbjct: 75 IRLLDWFERPDSFVLILERPEPVQDLFDFI----TERGALQEELARSFFWQVLEAVRHCH 130
Query: 401 ASDIIHRDVKTNNILLDSNFC-VKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCY 459
++HRD+K NIL+D N +K+ DFG L V T GT Y PE+ + +
Sbjct: 131 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEWIRYH 187
Query: 460 QLTDKS-DVYSFGVVLIELI 478
+ +S V+S G++L +++
Sbjct: 188 RYHGRSAAVWSLGILLYDMV 207
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 18/200 (9%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYDNNYRRVEQFMN------EVEILTRLR--HKNL 340
LG GGFG+VY G ++ D VA+K + + + N EV +L ++ +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
+ L R +L++ + D + + G L + + + A+ + H
Sbjct: 72 IRLLDWFERPDSFVLILERPEPVQDLFDFI----TERGALQEELARSFFWQVLEAVRHCH 127
Query: 401 ASDIIHRDVKTNNILLDSNFC-VKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCY 459
++HRD+K NIL+D N +K+ DFG L V T GT Y PE+ + +
Sbjct: 128 NXGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEWIRYH 184
Query: 460 QLTDKS-DVYSFGVVLIELI 478
+ +S V+S G++L +++
Sbjct: 185 RYHGRSAAVWSLGILLYDMV 204
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 18/200 (9%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYDNNYRRVEQFMN------EVEILTRLRH--KNL 340
LG GGFG+VY G ++ D VA+K + + + N EV +L ++ +
Sbjct: 64 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 123
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
+ L R +L++ + D + + G L + + + A+ + H
Sbjct: 124 IRLLDWFERPDSFVLILERPEPVQDLFDFI----TERGALQEELARSFFWQVLEAVRHCH 179
Query: 401 ASDIIHRDVKTNNILLDSNFC-VKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCY 459
++HRD+K NIL+D N +K+ DFG L V T GT Y PE+ + +
Sbjct: 180 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEWIRYH 236
Query: 460 QLTDKS-DVYSFGVVLIELI 478
+ +S V+S G++L +++
Sbjct: 237 RYHGRSAAVWSLGILLYDMV 256
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 93/202 (46%), Gaps = 25/202 (12%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYD--NNYRRVEQFMNEVEILTRLRHKNLVSLFGC 346
+G G +G+V K G VAVK+L + ++ E+ +L ++H+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 347 TS------RYSQGLLLVYEFVA--NGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAY 398
+ ++ L+ + A N V Q D L+ +R L Y
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 140
Query: 399 LHASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQC 458
+H++DIIHRD+K +N+ ++ + +K+ D GL+R T T Y PE
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDAGLAR----HTDDEMTGYVATRWYRAPEIMLN 196
Query: 459 YQLTDKS-DVYSFGVVLIELIS 479
+ +++ D++S G ++ EL++
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLT 218
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 18/200 (9%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYDNNYRRVEQFMN------EVEILTRLRH--KNL 340
LG GGFG+VY G ++ D VA+K + + + N EV +L ++ +
Sbjct: 39 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 98
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
+ L R +L++ + D + + G L + + + A+ + H
Sbjct: 99 IRLLDWFERPDSFVLILERPEPVQDLFDFI----TERGALQEELARSFFWQVLEAVRHCH 154
Query: 401 ASDIIHRDVKTNNILLDSNFC-VKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCY 459
++HRD+K NIL+D N +K+ DFG L V T GT Y PE+ + +
Sbjct: 155 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEWIRYH 211
Query: 460 QLTDKS-DVYSFGVVLIELI 478
+ +S V+S G++L +++
Sbjct: 212 RYHGRSAAVWSLGILLYDMV 231
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 18/200 (9%)
Query: 290 LGDGGFGTVYYG-KLKDGREVAVKRLYDNNYRRVEQFMN------EVEILTRLR--HKNL 340
LG GGFG+VY G ++ D VA+K + + + N EV +L ++ +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 341 VSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH 400
+ L R +L++ + D + + G L + + + A+ + H
Sbjct: 72 IRLLDWFERPDSFVLILERPEPVQDLFDFI----TERGALQEELARSFFWQVLEAVRHCH 127
Query: 401 ASDIIHRDVKTNNILLDSNFC-VKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCY 459
++HRD+K NIL+D N +K+ DFG L V T GT Y PE+ + +
Sbjct: 128 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSPPEWIRYH 184
Query: 460 QLTDKS-DVYSFGVVLIELI 478
+ +S V+S G++L +++
Sbjct: 185 RYHGRSAAVWSLGILLYDMV 204
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.136 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,235,292
Number of Sequences: 62578
Number of extensions: 757309
Number of successful extensions: 4502
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1012
Number of HSP's successfully gapped in prelim test: 86
Number of HSP's that attempted gapping in prelim test: 1928
Number of HSP's gapped (non-prelim): 1184
length of query: 625
length of database: 14,973,337
effective HSP length: 105
effective length of query: 520
effective length of database: 8,402,647
effective search space: 4369376440
effective search space used: 4369376440
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)