Query 047970
Match_columns 304
No_of_seqs 119 out of 1501
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 08:19:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047970.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047970hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vte_A Tetrahydrocannabinolic 100.0 1.6E-47 5.5E-52 371.7 28.6 295 3-303 116-477 (518)
2 3fw9_A Reticuline oxidase; BI- 100.0 1.5E-45 5.1E-50 356.8 27.6 289 3-302 108-457 (495)
3 3rja_A Carbohydrate oxidase; p 100.0 3.2E-40 1.1E-44 318.5 20.1 276 3-296 100-440 (473)
4 3tsh_A Pollen allergen PHL P 4 100.0 1E-37 3.5E-42 303.5 25.1 281 3-294 117-449 (500)
5 3pop_A GILR oxidase; FAD bindi 100.0 2E-37 6.7E-42 300.6 23.5 276 3-294 96-461 (501)
6 1zr6_A Glucooligosaccharide ox 100.0 4.9E-34 1.7E-38 277.4 21.7 274 4-294 105-445 (503)
7 2y3s_A TAML; oxidoreductase; H 100.0 9.6E-33 3.3E-37 269.6 25.6 273 4-294 121-487 (530)
8 2ipi_A Aclacinomycin oxidoredu 100.0 1.9E-32 6.4E-37 267.3 27.1 270 4-294 118-479 (521)
9 2wdx_A Putative hexose oxidase 100.0 5.6E-33 1.9E-37 271.0 22.3 269 3-294 119-483 (523)
10 2bvf_A 6-hydroxy-D-nicotine ox 100.0 8E-31 2.8E-35 252.4 21.5 260 4-288 100-418 (459)
11 1w1o_A Cytokinin dehydrogenase 99.4 1.9E-12 6.4E-17 126.5 12.5 79 4-85 139-257 (534)
12 4feh_A Oxidoreductase DPRE1; a 99.3 1.1E-11 3.8E-16 119.4 10.6 93 3-100 106-239 (481)
13 2yvs_A Glycolate oxidase subun 99.1 8.7E-11 3E-15 101.7 8.7 77 3-82 6-123 (219)
14 2exr_A Cytokinin dehydrogenase 99.1 2.6E-10 8.8E-15 111.1 11.7 91 5-101 132-263 (524)
15 2uuu_A Alkyldihydroxyacetoneph 99.1 5E-10 1.7E-14 110.3 11.7 92 4-101 204-339 (584)
16 3pm9_A Putative oxidoreductase 99.1 6E-10 2.1E-14 107.2 11.9 94 3-99 114-253 (476)
17 1wvf_A 4-cresol dehydrogenase 99.0 6.9E-10 2.3E-14 108.0 10.5 96 4-101 122-268 (520)
18 4bby_A Alkyldihydroxyacetoneph 99.0 2.2E-09 7.4E-14 107.3 12.5 80 3-85 272-396 (658)
19 2vfr_A Xylitol oxidase, aldito 98.9 4.7E-09 1.6E-13 99.5 9.1 68 3-75 79-185 (422)
20 1e8g_A Vanillyl-alcohol oxidas 98.7 8.8E-08 3E-12 94.0 10.9 97 3-101 136-300 (560)
21 1f0x_A DLDH, D-lactate dehydro 98.5 1.4E-07 4.9E-12 92.3 7.5 50 47-98 246-297 (571)
22 2i0k_A Oxidoreductase; MIX alp 98.4 4.5E-07 1.6E-11 88.9 8.6 67 3-75 104-223 (561)
23 3js8_A Cholesterol oxidase; ch 98.3 7.3E-07 2.5E-11 86.5 7.2 66 4-75 99-219 (540)
24 3tx1_A UDP-N-acetylenolpyruvoy 98.2 1.2E-06 4.2E-11 79.8 6.3 70 3-74 113-216 (322)
25 3i99_A UDP-N-acetylenolpyruvoy 97.9 9.9E-06 3.4E-10 74.8 5.3 69 4-74 92-198 (357)
26 1uxy_A MURB, uridine diphospho 97.5 0.00011 3.8E-09 67.3 5.9 68 5-74 77-182 (340)
27 1hsk_A UDP-N-acetylenolpyruvoy 97.3 0.00014 4.8E-09 66.3 4.2 90 3-107 107-232 (326)
28 2gqt_A UDP-N-acetylenolpyruvyl 97.1 0.0012 4.1E-08 58.4 7.3 83 8-105 77-192 (268)
No 1
>3vte_A Tetrahydrocannabinolic acid synthase; BI-covalent flavinylation, oxidoreductase; HET: NAG FAD; 2.75A {Cannabis sativa}
Probab=100.00 E-value=1.6e-47 Score=371.71 Aligned_cols=295 Identities=42% Similarity=0.761 Sum_probs=239.4
Q ss_pred cccEEEEeCCCcHHHHHHHHHhcCCceeecCcce-------------------------------EEE-ec------CCC
Q 047970 3 RKKTAWVQAGVTIGELYHRISEKSKYLGFPAGVR-------------------------------SIL-DR------KSM 44 (304)
Q Consensus 3 ~~~~a~vg~G~~~~~v~~~l~~~~~g~~~p~G~c-------------------------------~iv-~~------~~~ 44 (304)
++++|+||+|+++++|+++|.++|+|+.+|+|.| ++| ++ +.+
T Consensus 116 ~~~~v~V~aG~~l~~l~~~l~~~g~gl~~~~G~~~~vgvgG~~~gGg~G~~s~~~G~~~D~V~~~evV~adG~iv~~~~~ 195 (518)
T 3vte_A 116 HSQTAWVEAGATLGEVYYWINEKNENLSFPGGYCPTVGVGGHFSGGGYGALMRNYGLAADNIIDAHLVNVDGKVLDRKSM 195 (518)
T ss_dssp TTTEEEEETTCBHHHHHHHHHHHCTTEECCCCSCTTCBHHHHHHTCCCCTTHHHHCCGGGGEEEEEEECTTCCEECHHHH
T ss_pred CCCEEEEeCCccHHHHHHHHHHhCCCceecCCCCCCeeeeeeeCCCCCccccCCCCchhheEEEEEEEccCCeEEEeecc
Confidence 4679999999999999999999766899999998 344 22 236
Q ss_pred CchhHHHhhcCCCCceEEEEEEEEEEEecCCeEEEEEEEecch-hhHHHHHHHHHHHhccCCCCCceEEEEEeeC-----
Q 047970 45 GEDLFWALHGGGAASFGIIVAWKVNLVPVPSNVTVNTVTRTLE-QDATKIFQKWQSAADKLPEDLTCSAIFAVRN----- 118 (304)
Q Consensus 45 ~~DLfWAlRGgG~~nfGVVT~~~~k~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~p~~l~~~~~~~~~~----- 118 (304)
|+|||||+||||+|+|||||+++||++|+|+.+..+.+.|.++ +++.+++..|++++.++|+++++.+.+...+
T Consensus 196 ~~DLf~a~rGgg~g~fGIVt~~~l~l~p~p~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~l~~~~~~~~~~~~p~~ 275 (518)
T 3vte_A 196 GEDLFWAIRGGGGENFGIIAAWKIKLVAVPSKSTIFSVKKNMEIHGLVKLFNKWQNIAYKYDKDLVLMTHFITKNITDNH 275 (518)
T ss_dssp CHHHHHHHTTSCGGGTCEEEEEEEECEECCSCEEEEEEEECCCHHHHHHHHHHHHHHGGGSCTTEEEEEEEEEESCC---
T ss_pred ccchhhheecccCCCceEEEEEEEEEEeCCCeEEEEEEEecCCHHHHHHHHHHHHHHHHcCCHhHeEEEEEcccCCCCCC
Confidence 8999999999866999999999999999988788888887764 5689999999999999999999998886521
Q ss_pred ----CceEEEEEEEEecChhhhhhhhhhhhhhccccCCCcccceEeCHHHHHHHhhcccccc-chhh---hhhhhcccC-
Q 047970 119 ----SNIVALFSSLFLGRADQQWATYSHWVESLPELGLKKEDCMELSWVESIVYFDRGFLAK-DLLK---LETLLDRNY- 189 (304)
Q Consensus 119 ----g~~~~~~~~~~~G~~~e~~~~~~~l~~~l~~~~~~~~~~~~~~y~~~~~~~~~~~~~~-~~~~---~~~~~~~~~- 189 (304)
+.+.+.+.++|+|+.+++. +.|+++++++++....+.+++|.+.+.+++ ++..+ + + ++.+.+...
T Consensus 276 ~~~~~~~~~~~~~~~~G~~~~~~---~~l~~~~~~lg~~~~~~~~~~w~~~~~~~~-~~~~~~~--~~~~~~~l~~~~~~ 349 (518)
T 3vte_A 276 GKNKTTVHGYFSSIFHGGVDSLV---DLMNKSFPELGIKKTDCKEFSWIDTTIFYS-GVVNFNT--ANFKKEILLDRSAG 349 (518)
T ss_dssp ----CEEEEEEEEEEESCHHHHH---HHHHHHCGGGCCCGGGEEEECHHHHHHHTS-SSCCC-------CGGGGGCTTCS
T ss_pred CcCCCceEEEEEEEEeCCHHHHh---hhhhhhhhhcCCCccceeecchhhhhhhhh-cCCccCC--ccchhhhhccCCcC
Confidence 2356788999999999999 888887778876667789999999988876 44322 2 2 344443322
Q ss_pred CccceeeeecccCCCCCHHHHHHHHHHHHhcCCccEEEEEEecCccccCCCCCCCccccccc-cEee-----cCCh----
Q 047970 190 SKSFWKMRADFVMKPILVKGLEGMYDFFHEQGGKNLQVVAFPYSGKLAKIPESAISFPHRAG-NIYH-----WMEP---- 259 (304)
Q Consensus 190 ~~~~~~~~s~~~~~~l~~~~i~~l~~~~~~~p~~~~~v~~~~~gGa~~~~~~~~tAf~~R~~-~~~~-----w~~~---- 259 (304)
.+.+||.||.|++++|++++|+.|++.+.+.|.+.+.+.|.++||+++++++++|||+||++ .|.+ |.++
T Consensus 350 ~~~~~k~ks~~~~~~l~~~~i~~l~~~~~~~~~~~~~v~~~~~GGa~~~v~~~~TAf~hR~~~~~~~~~~~~w~~~~~~~ 429 (518)
T 3vte_A 350 KKTAFSIKLDYVKKPIPETAMVKILEKLYEEDVGAGMYVLYPYGGIMEEISESAIPFPHRAGIMYELWYTASWEKQEDNE 429 (518)
T ss_dssp CCBEEEEEEEEESSCCCHHHHHHHHHGGGGSCTTTEEEEEEECCGGGGTSCTTSSSCCCCTTCCEEEEEEEEECCTTTHH
T ss_pred cccceeeechhcccCCCHHHHHHHHHHHHhCCCCCeEEEEeecCccccCCCCCCCcccccCcceEEEEEEEecCCcchhH
Confidence 24567889999998899999999999888765546889999999999999999999999995 6665 8643
Q ss_pred ---HHHHHHHHccccccCCCCCceeccCCCCCCC-CCCCCCcceeecc
Q 047970 260 ---NLVRKLSNYTTPYVSKNPRATYLNVRDLEIG-RNNKGYTSVKEAS 303 (304)
Q Consensus 260 ---~w~~~~~~~l~~~~~~~~~g~YvNy~d~~~~-~~~~~~~~~~~~~ 303 (304)
+|++++++.|.|+.++.++|+|+||+|.|++ .+.-..|+|++|+
T Consensus 430 ~~~~w~~~~~~~~~p~~~~~~~g~YvNy~D~dl~~~~~~~~~~~~~~~ 477 (518)
T 3vte_A 430 KHINWVRSVYNFTTPYVSQNPRLAYLNYRDLDLGKTNHASPNNYTQAR 477 (518)
T ss_dssp HHHHHHHHHHHHTGGGSCCTTCCCCTTSCCGGGCCCCTTSCCCHHHHH
T ss_pred HHHHHHHHHHHHhccccCCCCccccccCCCccccccccccccchhhhh
Confidence 9999999999998765667999999999998 5422356676653
No 2
>3fw9_A Reticuline oxidase; BI-covalent flavinylation, N-glycosylation, alakloid biosynt oxidoreductase, alkaloid metabolism; HET: FAD SLX NAG MAN; 1.49A {Eschscholzia californica} PDB: 3d2h_A* 3d2d_A* 3d2j_A* 3gsy_A* 4ec3_A* 3fw8_A* 3fw7_A* 3fwa_A*
Probab=100.00 E-value=1.5e-45 Score=356.82 Aligned_cols=289 Identities=34% Similarity=0.627 Sum_probs=236.0
Q ss_pred cccEEEEeCCCcHHHHHHHHHhcCCceeecCcce-------------------------------EEE-ec------CCC
Q 047970 3 RKKTAWVQAGVTIGELYHRISEKSKYLGFPAGVR-------------------------------SIL-DR------KSM 44 (304)
Q Consensus 3 ~~~~a~vg~G~~~~~v~~~l~~~~~g~~~p~G~c-------------------------------~iv-~~------~~~ 44 (304)
++++|+||+|+++++|+++|.+++.|+++|+|.| ++| ++ +.+
T Consensus 108 ~~~~v~V~aG~~l~~l~~~l~~~g~gl~~~~G~~~~vgigG~~~gGg~G~~~~~~G~~~D~v~~~~vV~adG~i~~~~~~ 187 (495)
T 3fw9_A 108 ESETAWVESGSTLGELYYAITESSSKLGFTAGWCPTVGTGGHISGGGFGMMSRKYGLAADNVVDAILIDANGAILDRQAM 187 (495)
T ss_dssp TTTEEEEETTCBHHHHHHHHHHHCSSEECCCCSCTTCBHHHHHHTCCCCTTHHHHCCGGGGEEEEEEECTTCCEECHHHH
T ss_pred CCCEEEEcCCCCHHHHHHHHHHhcCCceeccCCCCCCeEeeeccCCCCcccccCCCchhheEEEEEEEcCCCCEEEcCCC
Confidence 4679999999999999999999755899999998 444 22 246
Q ss_pred CchhHHHhhcCCCCceEEEEEEEEEEEecCCeEEEEEEEecch-hhHHHHHHHHHHHhccCCCCCceEEEEEeeCCceEE
Q 047970 45 GEDLFWALHGGGAASFGIIVAWKVNLVPVPSNVTVNTVTRTLE-QDATKIFQKWQSAADKLPEDLTCSAIFAVRNSNIVA 123 (304)
Q Consensus 45 ~~DLfWAlRGgG~~nfGVVT~~~~k~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~p~~l~~~~~~~~~~g~~~~ 123 (304)
++|||||+||||+|+|||||+++||++|+|+.+..+.+.|+++ +++.+++..|++++.++|+++++.+......+.+.+
T Consensus 188 ~~DLf~a~rGg~~g~~GIVt~~~l~l~p~p~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 267 (495)
T 3fw9_A 188 GEDVFWAIRGGGGGVWGAIYAWKIKLLPVPEKVTVFRVTKNVAIDEATSLLHKWQFVAEELEEDFTLSVLGGADEKQVWL 267 (495)
T ss_dssp CHHHHHHHTTSCTTSSCEEEEEEEECEECCSSEEEEEEEEEECHHHHHHHHHHHHHHHHHSCTTEEEEEEEEEETTEEEE
T ss_pred ChhhhhhhhcccCCCcEEEEEEEEEEEeCCCeEEEEEEeecCcHHHHHHHHHHHHHHHhcCChhHeEEEEEcCCCCceEE
Confidence 8999999999766999999999999999988788888888763 568999999999999999999988876543445678
Q ss_pred EEEEEEecChhhhhhhhhhhhhhccccCCCcccceEeCHHHHHHHhhccccccchhhhhhhhcccC--Cccceeeeeccc
Q 047970 124 LFSSLFLGRADQQWATYSHWVESLPELGLKKEDCMELSWVESIVYFDRGFLAKDLLKLETLLDRNY--SKSFWKMRADFV 201 (304)
Q Consensus 124 ~~~~~~~G~~~e~~~~~~~l~~~l~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~s~~~ 201 (304)
.+.++|+|+++++. +.|+++++.+++....+.++||.+++.+++ +++. ++.+.+... .+.+||.||.++
T Consensus 268 ~~~~~~~G~~~~~~---~~l~~~~~~lg~~~~~~~~~~~~~~~~~~~-~~~~-----~~~l~~~~~~~~~~~~~~ks~~~ 338 (495)
T 3fw9_A 268 TMLGFHFGLKTVAK---STFDLLFPELGLVEEDYLEMSWGESFAYLA-GLET-----VSQLNNRFLKFDERAFKTKVDLT 338 (495)
T ss_dssp EEEEEESSCHHHHH---HHHHHHCGGGCCCGGGCEEECHHHHHHHHT-TCSC-----GGGGGCTTSCSCCCEEEEEEEEC
T ss_pred EEEEEEeCCHHHHH---HHHHHhhhhcCCCccceEEcCHHHHHHHHh-cccc-----hhhhcCCCCCccCcceeEeehhh
Confidence 89999999999998 888887778877667899999999888775 3321 233333222 245678999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCCccEEEEEEecCccccCCCCCCCcccccc-ccEee-----cCC---h------HHHHHHH
Q 047970 202 MKPILVKGLEGMYDFFHEQGGKNLQVVAFPYSGKLAKIPESAISFPHRA-GNIYH-----WME---P------NLVRKLS 266 (304)
Q Consensus 202 ~~~l~~~~i~~l~~~~~~~p~~~~~v~~~~~gGa~~~~~~~~tAf~~R~-~~~~~-----w~~---~------~w~~~~~ 266 (304)
+++|++++|+.|++.+.+.+. +.+.|+++||+++++++++|||+||+ ..|.+ |.+ + +|+++++
T Consensus 339 ~~~l~~~~i~~l~~~~~~~~~--~~~~~~~~GGa~~~v~~~~TAf~hR~~~~~~~~~~~~w~~~~~~~~~~~~~w~~~~~ 416 (495)
T 3fw9_A 339 KEPLPSKAFYGLLERLSKEPN--GFIALNGFGGQMSKISSDFTPFPHRSGTRLMVEYIVAWNQSEQKKKTEFLDWLEKVY 416 (495)
T ss_dssp SSCCCHHHHHHHHHHHHHCTT--EEEEEEECCGGGGTSCTTTSSCCCCTTCCEEEEEEEEECGGGGGGHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHhhCCC--cEEEecccCCccccCCCCCCCccccCccceEEEEEEecCCCCcchhHHHHHHHHHHH
Confidence 988999999999999987764 67999999999999999999999999 45655 853 1 9999999
Q ss_pred HccccccCCCCCceeccCCCCCCCCCCC-----CCcceeec
Q 047970 267 NYTTPYVSKNPRATYLNVRDLEIGRNNK-----GYTSVKEA 302 (304)
Q Consensus 267 ~~l~~~~~~~~~g~YvNy~d~~~~~~~~-----~~~~~~~~ 302 (304)
+.|.|+.++.++++|+||+|.|++.+++ +.++|++|
T Consensus 417 ~~~~p~~~~~~~~~Y~Ny~d~dl~~~~~~~~~~~~~~~~~~ 457 (495)
T 3fw9_A 417 EFMKPFVSKNPRLGYVNHIDLDLGGIDWGNKTVVNNAIEIS 457 (495)
T ss_dssp HHHGGGSCCSSCCCCGGGCCGGGCCCCTTCHHHHHTHHHHH
T ss_pred HHHhhhccCCCcccccCccCccccccccccccccccccchh
Confidence 9999997655678999999999986554 34555554
No 3
>3rja_A Carbohydrate oxidase; protein-substrate analogue complex, FAD binding domain, BERB berberine-like domain, glucooligosaccharide oxidase; HET: FAD NAG ABL TRS; 2.10A {Microdochium nivale} PDB: 3rj8_A*
Probab=100.00 E-value=3.2e-40 Score=318.48 Aligned_cols=276 Identities=20% Similarity=0.329 Sum_probs=215.0
Q ss_pred cccEEEEeCCCcHHHHHHHHHhcCCc-eeecCcce--------------------------------------EEE-ecC
Q 047970 3 RKKTAWVQAGVTIGELYHRISEKSKY-LGFPAGVR--------------------------------------SIL-DRK 42 (304)
Q Consensus 3 ~~~~a~vg~G~~~~~v~~~l~~~~~g-~~~p~G~c--------------------------------------~iv-~~~ 42 (304)
++++|+||+|+++++|+++|.++ | +++|+|.| +++ +++
T Consensus 100 ~~~~v~v~aG~~~~~l~~~l~~~--G~~~~p~G~~~~vgvgG~~~ggg~G~~~~~~G~~~D~v~~~~vV~a~G~v~~~~~ 177 (473)
T 3rja_A 100 KTGIAHVEPGARLGHLATVLNDK--YGRAISHGTCPGVGISGHFAHGGFGFSSHMHGLAVDSVVGVTVVLADGRIVEASA 177 (473)
T ss_dssp TTTEEEECTTCBHHHHHHHHHHH--HSEECCCCSCTTCBHHHHHHTCCCCTTHHHHCCGGGGEEEEEEECTTSCEEEEET
T ss_pred CCCEEEECCCCCHHHHHHHHHHc--CCEEeccCCCCCcEeeeeccCCCCCcccccccchHhheeeEEEEecCCeEEEeCC
Confidence 46799999999999999999997 6 99999998 455 677
Q ss_pred CCCchhHHHhhcCCCCceEEEEEEEEEEEecCCeEEEEEEEecch--hhHHHHHHHHHHHhc-cCCCCCceEEEEEeeCC
Q 047970 43 SMGEDLFWALHGGGAASFGIIVAWKVNLVPVPSNVTVNTVTRTLE--QDATKIFQKWQSAAD-KLPEDLTCSAIFAVRNS 119 (304)
Q Consensus 43 ~~~~DLfWAlRGgG~~nfGVVT~~~~k~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~-~~p~~l~~~~~~~~~~g 119 (304)
++|+|||||+||+| |+|||||+++||++|+|+.+..+.+.|+++ +++.+++++|+++.. ++|++|++.+.+. + .
T Consensus 178 ~~~~dLf~a~rG~~-g~~GIVt~~~l~l~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~-~-~ 254 (473)
T 3rja_A 178 TENADLFWGIKGAG-SNFGIVAVWKLATFPAPKVLTRFGVTLNWKNKTSALKGIEAVEDYARWVAPREVNFRIGDY-G-A 254 (473)
T ss_dssp TBSHHHHHHHHHHG-GGTCEEEEEEEECEECCSCEEEEEEECCCCSHHHHHHHHHHHHHHHHHTCCTTEEEEEEES-S-S
T ss_pred CCCcchhhcccCCC-CceEEEEEEEEEEEeCCCceEEEEEEecCccHHHHHHHHHHHHHHhhhCCChhHEEEEEEc-C-C
Confidence 88999999999998 899999999999999987787888888773 248899999999987 8999999888876 2 2
Q ss_pred ceEEEEEEEEecChhhhhhhhhhhhhhccccC-CCcccce-EeCHHHHHHHhhccccccchhhhhhhhcccCCccceeee
Q 047970 120 NIVALFSSLFLGRADQQWATYSHWVESLPELG-LKKEDCM-ELSWVESIVYFDRGFLAKDLLKLETLLDRNYSKSFWKMR 197 (304)
Q Consensus 120 ~~~~~~~~~~~G~~~e~~~~~~~l~~~l~~~~-~~~~~~~-~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (304)
. .+.+.++|.|++++++ ++|+|++.... +....+. +++|.+++.+++ +. . +++... +.++..|+.|
T Consensus 255 ~-~~~~~~~~~G~~~~~~---~~l~pl~~~~p~~~~~~~~~~~~~~~~~~~~~-~~---~--~~~~~~--~~~~~~~~~k 322 (473)
T 3rja_A 255 G-NPGIEGLYYGTPEQWR---AAFQPLLDTLPAGYVVNPTTSLNWIESVLSYS-NF---D--HVDFIT--PQPVENFYAK 322 (473)
T ss_dssp S-CCEEEEEEESCHHHHH---HHHHHHHTTSCTTCEECCCEEECHHHHHHHTS-SS---S--CCCCSS--CCCCBEEEEE
T ss_pred C-cEEEEEEecCCHHHHH---HHHHHHHHhCCCCcceeeecccCHHHHHHhhh-cC---C--Cccccc--CCCCCcceEe
Confidence 2 2778899999999999 88888653332 2346778 999999887664 11 0 111110 0113446789
Q ss_pred ecccCCCCCHHHHHHHHHHHHhc-CC---ccEEEEEEecCc---cccCCCCCCCccccccccEee-----cCC-h-----
Q 047970 198 ADFVMKPILVKGLEGMYDFFHEQ-GG---KNLQVVAFPYSG---KLAKIPESAISFPHRAGNIYH-----WME-P----- 259 (304)
Q Consensus 198 s~~~~~~l~~~~i~~l~~~~~~~-p~---~~~~v~~~~~gG---a~~~~~~~~tAf~~R~~~~~~-----w~~-~----- 259 (304)
|.++.. +++++++.+++.+.+. +. ..+.++++++|| +++++++++|||+||++.|.+ |.+ +
T Consensus 323 s~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~ai~~v~~~~TAf~hR~~~~~~~~~~~w~~~~~~~~~ 401 (473)
T 3rja_A 323 SLTLKS-IKGDAVKNFVDYYFDVSNKVKDRFWFYQLDVHGGKNSQVTKVTNAETAYPHRDKLWLIQFYDRYDNNQTYPET 401 (473)
T ss_dssp EEEESC-CTTHHHHHHHHHHHHTGGGCCSSEEEEEEEECCSTTCGGGGSCTTTSSCCCTTCSEEEEEEEEECTTSCCCTT
T ss_pred ccccCC-CCHHHHHHHHHHHHhcCCCCCCcceEEEEEecCCcchhhcCCCCCCCccccCCccEEEEEEEEeCCCCccchH
Confidence 988764 9999999999988653 22 245688999998 788999999999999988766 742 1
Q ss_pred --HHHHHHHHccccccCCCCCceeccCCCCCCCCCCCCC
Q 047970 260 --NLVRKLSNYTTPYVSKNPRATYLNVRDLEIGRNNKGY 296 (304)
Q Consensus 260 --~w~~~~~~~l~~~~~~~~~g~YvNy~d~~~~~~~~~~ 296 (304)
+|++++++.+.+...+...|+|+||+|.+++.++|..
T Consensus 402 ~~~~~~~~~~~~~~~~~~~~~g~YvNy~d~~~~~~~~~~ 440 (473)
T 3rja_A 402 SFKFLDGWVNSVTKALPKSDWGMYINYADPRMDRDYATK 440 (473)
T ss_dssp THHHHHHHHHHHHTTSCGGGEECCGGGCCCSSCHHHHHH
T ss_pred HHHHHHHHHHHHHhhCCCCCCceEecCCCccccchhHHH
Confidence 8888888777654433345899999999987666643
No 4
>3tsh_A Pollen allergen PHL P 4; flavoprotein, BI-covalent flavinylation, oxidoreductase, Glu dehydrogenase, N-glycosylation, allergy, dehydrogenase; HET: FDA; 1.90A {Phleum pratense} PDB: 3tsj_A*
Probab=100.00 E-value=1e-37 Score=303.46 Aligned_cols=281 Identities=38% Similarity=0.727 Sum_probs=219.9
Q ss_pred cccEEEEeCCCcHHHHHHHHHhcCCceeecCcce-------------------------------EEE-e------cCCC
Q 047970 3 RKKTAWVQAGVTIGELYHRISEKSKYLGFPAGVR-------------------------------SIL-D------RKSM 44 (304)
Q Consensus 3 ~~~~a~vg~G~~~~~v~~~l~~~~~g~~~p~G~c-------------------------------~iv-~------~~~~ 44 (304)
++++|+||+|++++||+++|.++|+++.+++|+| ++| + +.++
T Consensus 117 ~~~~~~v~~G~~~~~~~~~l~~~g~~~~~~~g~~~~vgvgG~~~~gg~g~~~~~~G~~~d~v~~~~vV~a~G~i~~~~~~ 196 (500)
T 3tsh_A 117 KARTAWVDSGAQLGELYYAIYKASPTLAFPAGVCPTIGVGGNFAGGGFGMLLRKYGIAAENVIDVKLVDANGKLHDKKSM 196 (500)
T ss_dssp TTTEEEEETTSBHHHHHHHHHHHCTTEECCCCSSTTSBHHHHHHTCCCCTTHHHHCCGGGGEEEEEEECTTSCEECHHHH
T ss_pred CCCEEEEccCcCHHHHHHHHHHhCCCcccCCCCCCCceecCccccccCCccccccCChhhheeeEEEECCCceEEECCCC
Confidence 5789999999999999999999866689999999 444 3 3457
Q ss_pred CchhHHHhhcCCCCceEEEEEEEEEEEecCCeEEEEEEEecchhhHHHHHHHHHHHhccCCCCCceEEEEEeeCCceEEE
Q 047970 45 GEDLFWALHGGGAASFGIIVAWKVNLVPVPSNVTVNTVTRTLEQDATKIFQKWQSAADKLPEDLTCSAIFAVRNSNIVAL 124 (304)
Q Consensus 45 ~~DLfWAlRGgG~~nfGVVT~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~l~~~~~~~~~~g~~~~~ 124 (304)
|+|||||+||||||||||||++++|+||+|+.+..+.+.+...+.+.+++..|+.+.+++|+++...+.... +...
T Consensus 197 ~~dl~~a~~gg~gg~fGvvt~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----~~~~ 272 (500)
T 3tsh_A 197 GDDHFWAVRGGGGESFGIVVAWQVKLLPVPPTVTIFKISKTVSEGAVDIINKWQVVAPQLPADLMIRIIAQG----PKAT 272 (500)
T ss_dssp CHHHHHHHTTSCSSTTCEEEEEEEECEECCSCEEEEEEEEETTTTHHHHHHHHHHHGGGSCTTEEEEEEESS----SEEE
T ss_pred ChHHHHHHHhhcccceEEEEEEEEEEEeCCCeEEEEEEecCcHHHHHHHHHHHHHhhhccChhhEEEEEecC----CCcE
Confidence 899999999998899999999999999998888788887776666899999999999999999887665533 4667
Q ss_pred EEEEEecChhhhhhhhhhhhhhccccCCCcccceEeCHHHHHHHhhccccccchhhhhhhhcccC-CccceeeeecccCC
Q 047970 125 FSSLFLGRADQQWATYSHWVESLPELGLKKEDCMELSWVESIVYFDRGFLAKDLLKLETLLDRNY-SKSFWKMRADFVMK 203 (304)
Q Consensus 125 ~~~~~~G~~~e~~~~~~~l~~~l~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~ 203 (304)
+..+|.|+.+++. ..+.+.++.++.....+.+++|.+.+.++. ...... ..+....... ...+.+.++.++.+
T Consensus 273 ~~~~~~g~~~~~~---~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (500)
T 3tsh_A 273 FEAMYLGTCKTLT---PLMSSKFPELGMNPSHCNEMSWIQSIPFVH-LGHRDA--LEDDLLNRQNSFKPFAEYKSDYVYQ 346 (500)
T ss_dssp EEEEESSCHHHHH---HHHHHHCGGGCCCGGGCEEECHHHHHHHHH-HCCSSC--HHHHHHCCCCCCCCEEEEEEEEECS
T ss_pred EEEEEecchhhhh---hhhhhcchhccCCccccchhhhhccchhhh-hccccc--cccccccccccccchhhhhhhhhcc
Confidence 7889999998888 777776677776666778899998776543 111111 1122222211 13344567778887
Q ss_pred CCCHHHHHHHHHHHHhcCCccEEEEEEecCccccCCCCCCCccccccccEe-e-----cCCh-------HHHHHHHHccc
Q 047970 204 PILVKGLEGMYDFFHEQGGKNLQVVAFPYSGKLAKIPESAISFPHRAGNIY-H-----WMEP-------NLVRKLSNYTT 270 (304)
Q Consensus 204 ~l~~~~i~~l~~~~~~~p~~~~~v~~~~~gGa~~~~~~~~tAf~~R~~~~~-~-----w~~~-------~w~~~~~~~l~ 270 (304)
+++.+.++.+++.+...|.. ..+.++.+||+++++++++|||+||++.++ + |.++ +|++++++.+.
T Consensus 347 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Gga~~~~~~~ata~~~R~~~l~~i~~~~~w~~~~~~~~~~~~~~~~~~~~~ 425 (500)
T 3tsh_A 347 PFPKTVWEQILNTWLVKPGA-GIMIFDPYGATISATPESATPFPHRKGVLFNIQYVNYWFAPGAAAAPLSWSKDIYNYME 425 (500)
T ss_dssp CCCHHHHHHHHHTGGGSTTC-CEEEEEECCHHHHHSCTTSSSCCCCTTCCEEEEEEEEECSTTCCHHHHHHHHHHHHHHG
T ss_pred cCcHHHHHHHHHHhhcCCCc-eEEEEcccCccccCCCCccCcCcccCCcEEEEEEEEecCCcchhHHHHHHHHHHHHHHH
Confidence 79999999888876665553 557789999999999999999999997533 2 8654 89999999999
Q ss_pred cccCCCCCceeccCCCCCCCCCCC
Q 047970 271 PYVSKNPRATYLNVRDLEIGRNNK 294 (304)
Q Consensus 271 ~~~~~~~~g~YvNy~d~~~~~~~~ 294 (304)
++....++++|+||+|.|++.++.
T Consensus 426 ~~~~~~~~~aY~Ny~D~dlg~~~~ 449 (500)
T 3tsh_A 426 PYVSKNPRQAYANYRDIDLGRNEV 449 (500)
T ss_dssp GGSCCSSCCCCTTSCCGGGCCCCE
T ss_pred HHhcCCCCeEEecccccccccccc
Confidence 987666678999999999988764
No 5
>3pop_A GILR oxidase; FAD binding protein, gilvocarcin, gilvocarcin biosynthesis, covalently bound FAD, oxidoreductase; HET: FAD; 1.65A {Streptomyces griseoflavus} PDB: 3pqb_A*
Probab=100.00 E-value=2e-37 Score=300.57 Aligned_cols=276 Identities=16% Similarity=0.244 Sum_probs=204.1
Q ss_pred cccEEEEeCCCcHHHHHHHHHhcCCceeecCcce-------------------------------E-----------EE-
Q 047970 3 RKKTAWVQAGVTIGELYHRISEKSKYLGFPAGVR-------------------------------S-----------IL- 39 (304)
Q Consensus 3 ~~~~a~vg~G~~~~~v~~~l~~~~~g~~~p~G~c-------------------------------~-----------iv- 39 (304)
++++|+||+|++++||+++|.++ +|+++|+|.| + +|
T Consensus 96 ~~~~v~v~aG~~~~~l~~~l~~~-~Gl~~~~G~~~~vgvgG~~~gGg~G~~~~~~G~~~D~v~~~evV~~da~G~~~~v~ 174 (501)
T 3pop_A 96 DGAGVRVGSGATVDQVQKALFRR-WNAALPLGACSAVGMGGLVAGGGYGPLSRQLGLVVDHLHAVEVAVVDESRTVRLVT 174 (501)
T ss_dssp TSSSEEEETTCBHHHHHHHHHHH-HSBCCCCCSBTTCBHHHHHHHCCCCTTHHHHCCGGGGEEEEEEEEECTTSCEEEEE
T ss_pred CCCEEEEECCcCHHHHHHHHHhh-cCeEeCCCCCCCceEeeccccCCCcccccccccHHHhEEEEEEEEecCCCCEEEEE
Confidence 46789999999999999999753 3899999999 2 23
Q ss_pred e---cCCCCchhHHHhhcCCCCceEEEEEEEEEE----------Eec-CCeEEEEEEEecch----hhHHHHHHHHHHHh
Q 047970 40 D---RKSMGEDLFWALHGGGAASFGIIVAWKVNL----------VPV-PSNVTVNTVTRTLE----QDATKIFQKWQSAA 101 (304)
Q Consensus 40 ~---~~~~~~DLfWAlRGgG~~nfGVVT~~~~k~----------~~~-~~~~~~~~~~~~~~----~~~~~~l~~~~~~~ 101 (304)
+ ++++|+|||||+||||+|+|||||+++||+ +|. |..++.+.+.|++. +.+.++++.|++|.
T Consensus 175 ~~~~~~~~~~DLf~a~rG~G~g~fGIVt~~~lk~~~~~~~~~~~~p~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (501)
T 3pop_A 175 ARADDTGDLGELFWAHTGGGGGNFGVVTAYEFRSPEHLATEPVGLPRAAGRLHVQKVVFPWAMIDETSFVTVMRRFFEWH 254 (501)
T ss_dssp EETTCCHHHHHHHHHTTTSCTTSSCEEEEEEECCCTTTCBTTTTBCBCCSEEEEEEEEEEGGGCCHHHHHHHHHHHHHHH
T ss_pred eccCCCCCCccHHHHhhccCCCCcEEEEEEEEEeccccCCChhhcCCCCceEEEEEEEEchhhcCHHHHHHHHHHHHHHH
Confidence 3 345679999999999769999999999999 765 44688888888862 23568999999987
Q ss_pred c--cCCCCC--ceEEEEEeeC-CceEEEEEEEEecChhhhhhhhhhhhhhccc----cC-CCcccceEeCHHHHHHHhhc
Q 047970 102 D--KLPEDL--TCSAIFAVRN-SNIVALFSSLFLGRADQQWATYSHWVESLPE----LG-LKKEDCMELSWVESIVYFDR 171 (304)
Q Consensus 102 ~--~~p~~l--~~~~~~~~~~-g~~~~~~~~~~~G~~~e~~~~~~~l~~~l~~----~~-~~~~~~~~~~y~~~~~~~~~ 171 (304)
. ..|++. .....+.... ....+.+..+|.|+.++++ +++++++.. ++ .+...+.+++|.+++..+.
T Consensus 255 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~---~~l~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~- 330 (501)
T 3pop_A 255 ERHSEPGSPESSLFATFFVNHVSSGVLQLMVQQDADVDPEG---EILARFVASLTEGTGVVGIPRGGVMSWLTGTRYMS- 330 (501)
T ss_dssp HHSCCTTCGGGGEEEEEEEECGGGCEEEEEEEEETTTCTTC---HHHHHHHHHHHTTSSCCCEEEEEEEEHHHHHHHTC-
T ss_pred hhccCCCccccceEEEEEecCCCCCeEEEEEEEeCChHHHH---HHHHHHHHhhhhccCCCccceeEEeCHHHHHhhhc-
Confidence 5 567664 2332222211 1123566777899988888 777776432 22 1222388999999776442
Q ss_pred cccccchhhhhhhhcccCCccceeeeecccCCCCCHHHHHHHHHHHHhc-CCccEEEEEEecCccccCCCCCCCcccccc
Q 047970 172 GFLAKDLLKLETLLDRNYSKSFWKMRADFVMKPILVKGLEGMYDFFHEQ-GGKNLQVVAFPYSGKLAKIPESAISFPHRA 250 (304)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~~i~~l~~~~~~~-p~~~~~v~~~~~gGa~~~~~~~~tAf~~R~ 250 (304)
...+ .+. . ..+++.||.+++++++++.++.+++.+.+. |.+.+.++++.+||+++++++++|||+||+
T Consensus 331 -~~~~-----~~~----~-~~~~~~ks~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~GGav~~v~~~~TAf~hR~ 399 (501)
T 3pop_A 331 -QADC-----GDV----M-GARSASKSAYHRAAPTDEQLSVLHRHLHADHPGQASYVMFNSYGGEINRRGPSDAAVPQRD 399 (501)
T ss_dssp -BCSC-----GGG----T-TCEEEEEEEEESSCCCHHHHHHHHHHHTSSSCCTTEEEEEEECCGGGGGSCTTTSSCCCCS
T ss_pred -CCCC-----Ccc----c-ccccceecccccCCCCHHHHHHHHHHHHhcCCCCceEEEEEecCcccccCCCCCCCccCcC
Confidence 1100 010 0 123577999998789999999999988764 445688999999999999999999999999
Q ss_pred ccEee-----cCCh-------HHHHHHHHccccccC------CCCCceeccCCCCCCCCCCC
Q 047970 251 GNIYH-----WMEP-------NLVRKLSNYTTPYVS------KNPRATYLNVRDLEIGRNNK 294 (304)
Q Consensus 251 ~~~~~-----w~~~-------~w~~~~~~~l~~~~~------~~~~g~YvNy~d~~~~~~~~ 294 (304)
+.|.+ |.++ +|++++++.|.+.+. +..+|+|+||+|.|++.++|
T Consensus 400 ~~~~~~~~~~w~~~~~~~~~~~w~~~~~~~~~~~~~g~p~~~~~~~gaYvNy~d~dl~~~~~ 461 (501)
T 3pop_A 400 SVVKSSWFSAWQDAELDELHLGWLRGLYEEFFAGTGGVPVTGGRTDGCYINYPDADLLDPAR 461 (501)
T ss_dssp CSEEEEEEEEESCGGGHHHHHHHHHHHHHHHTGGGTTSCCTTSSBCCCCTTSCCGGGGCTTT
T ss_pred ccEEEEEEEEeCCcchHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCceeccCCCcccccccc
Confidence 87765 8653 899999999976641 23468999999999987764
No 6
>1zr6_A Glucooligosaccharide oxidase; alpha + beta, flavoenzyme, oxidoreductase; HET: NAG FAD; 1.55A {Acremonium strictum} PDB: 2axr_A* 3e0t_A* 3hsu_A*
Probab=100.00 E-value=4.9e-34 Score=277.43 Aligned_cols=274 Identities=17% Similarity=0.254 Sum_probs=203.6
Q ss_pred ccEEEEeCCCcHHHHHHHHHhcCCceeecCcce--------------------------------------EEE-ecCCC
Q 047970 4 KKTAWVQAGVTIGELYHRISEKSKYLGFPAGVR--------------------------------------SIL-DRKSM 44 (304)
Q Consensus 4 ~~~a~vg~G~~~~~v~~~l~~~~~g~~~p~G~c--------------------------------------~iv-~~~~~ 44 (304)
+++|+||+|+++++|+++|.++ +|+++|+|.| +++ +++++
T Consensus 105 ~~~v~v~aG~~~~~l~~~l~~~-~gl~~~~G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~~~vV~a~G~i~~~~~~~ 183 (503)
T 1zr6_A 105 NNVATIQGGARLGYTALELLDQ-GNRALSHGTCPAVGVGGHVLGGGYGFATHTHGLTLDWLIGATVVLADASIVHVSETE 183 (503)
T ss_dssp TSCEEEETTCBHHHHHHHHHHT-TSEECCCCSCTTSBHHHHHHHCCCSTTHHHHCCGGGGEEEEEEECTTSCEEEEBTTB
T ss_pred CCeEEEecCCCHHHHHHHHHHc-CCEEeCCCCCCcCchhhhhcCCCCCcccccccChhheEEEEEEEecCCCEEEeCCCC
Confidence 5689999999999999999776 3699999988 455 67788
Q ss_pred CchhHHHhhcCCCCceEEEEEEEEEEEecCCeEEEEEEEecc-hhhHHHHHHHHHHHhcc-CCCCCceEEEEEeeCCceE
Q 047970 45 GEDLFWALHGGGAASFGIIVAWKVNLVPVPSNVTVNTVTRTL-EQDATKIFQKWQSAADK-LPEDLTCSAIFAVRNSNIV 122 (304)
Q Consensus 45 ~~DLfWAlRGgG~~nfGVVT~~~~k~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~-~p~~l~~~~~~~~~~g~~~ 122 (304)
|+|||||+|||| |+|||||+++||++|.|+.+..+.+.|++ .+++.++++.|+++... +|++++..+.+.. ..
T Consensus 184 ~~dL~~a~rG~~-g~~GIVt~~~l~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~----~~ 258 (503)
T 1zr6_A 184 NADLFWALRGGG-GGFAIVSEFEFNTFEAPEIITTYQVTTTWNRKQHVAGLKALQDWAQNTMPRELSMRLEINA----NA 258 (503)
T ss_dssp SHHHHHHHTTCC-SSSCEEEEEEECCEECCSCEEEEEEEECCCHHHHHHHHHHHHHHHHHTCCTTBCCEEEEET----TE
T ss_pred CccHHHHHhccC-CCcEEEEEEEEEEEecCceeEEEEEEEeCCHHHHHHHHHHHHHHHhhcCChhHEEEEEEeC----Ce
Confidence 999999999999 69999999999999998766667777665 34578899999999876 8999988877654 26
Q ss_pred EEEEEEEecChhhhhhhhhhhhhhccccCCC--cccceEeCHHHHHHHhhccccccchhhhhhhhcccCCccceeeeecc
Q 047970 123 ALFSSLFLGRADQQWATYSHWVESLPELGLK--KEDCMELSWVESIVYFDRGFLAKDLLKLETLLDRNYSKSFWKMRADF 200 (304)
Q Consensus 123 ~~~~~~~~G~~~e~~~~~~~l~~~l~~~~~~--~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 200 (304)
+.+.++|.|+.++++ +.|++++..+... ...+..++|.+.+..+. + +. ..+.. .+...+..++.++.+
T Consensus 259 ~~~~~~~~g~~~~~~---~~l~pl~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~--~~~~~-~p~g~~~~~~~~s~~ 328 (503)
T 1zr6_A 259 LNWEGNFFGNAKDLK---KILQPIMKKAGGKSTISKLVETDWYGQINTYL-Y---GA--DLNIT-YNYDVHEYFYANSLT 328 (503)
T ss_dssp EEEEEEESSCHHHHH---HHHHHHHHHTTSCEEEEEEEEECHHHHHTTSC-T---TC--CSSCS-SCCCCCBCEEEEEEE
T ss_pred EEEEEEEECCHHHHH---HHHHHHHHhcCcCCCcCceeeCCHHHHHHHHc-C---CC--ccccc-CCCCccccceecccc
Confidence 677788999999998 7888865434331 24567889997543222 0 00 00111 011123346788999
Q ss_pred cCCCCCHHHHHHHHHHHH-hcCC---ccEEEEEEecCc---cccCCCCCCCccccccccEee-----c-----CC----h
Q 047970 201 VMKPILVKGLEGMYDFFH-EQGG---KNLQVVAFPYSG---KLAKIPESAISFPHRAGNIYH-----W-----ME----P 259 (304)
Q Consensus 201 ~~~~l~~~~i~~l~~~~~-~~p~---~~~~v~~~~~gG---a~~~~~~~~tAf~~R~~~~~~-----w-----~~----~ 259 (304)
+++ ++++.++.+++.+. +.+. ..+.+.++.+|| +++++++++|||+||++.+.+ | .+ .
T Consensus 329 ~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~av~~~~~~~ta~~~R~~~~~~~~~~~~~~~~~~~~~~~~ 407 (503)
T 1zr6_A 329 APR-LSDEAIQAFVDYKFDNSSVRPGRGWWIQWDFHGGKNSALAAVSNDETAYAHRDQLWLWQFYDSIYDYENNTSPYPE 407 (503)
T ss_dssp ESS-CCHHHHHHHHHHHHHSCCCCTTEEEEEEEEECCSTTCSGGGSCTTTSSCCCTTCSEEEEEEEEETTTTTCCTTTTT
T ss_pred hhh-CCHHHHHHHHHHHHhhCCCCCCcceEEEEEEcCCchhhhcCCCcccCCcccccceeEEEEEeeeccccCCCccchH
Confidence 888 99999999999988 5432 235688999999 899999999999999987654 5 22 1
Q ss_pred ---HHHHHHHHccccccCCCCCceeccCCCCCCCCCCC
Q 047970 260 ---NLVRKLSNYTTPYVSKNPRATYLNVRDLEIGRNNK 294 (304)
Q Consensus 260 ---~w~~~~~~~l~~~~~~~~~g~YvNy~d~~~~~~~~ 294 (304)
+|++++++.+.........|+|+||+|.+++.++|
T Consensus 408 ~~~~~~~~~~~~l~~~~~~~~~g~Y~Nyad~~~~~~~~ 445 (503)
T 1zr6_A 408 SGFEFMQGFVATIEDTLPEDRKGKYFNYADTTLTKEEA 445 (503)
T ss_dssp SCHHHHHHHHHHHHTTSCGGGCBCCGGGCCTTCCHHHH
T ss_pred HHHHHHHHHHHHHHhhCCCCCCceeccCCCcccccchH
Confidence 78888777666543211237999999988773344
No 7
>2y3s_A TAML; oxidoreductase; HET: FAD TIR; 1.67A {Streptomyces SP} PDB: 2y3r_A* 2y08_A* 2y4g_A*
Probab=100.00 E-value=9.6e-33 Score=269.61 Aligned_cols=273 Identities=17% Similarity=0.327 Sum_probs=195.3
Q ss_pred ccEEEEeCCCcHHHHHHHHHh-cCCceeecCcce-------------------------------EEE------------
Q 047970 4 KKTAWVQAGVTIGELYHRISE-KSKYLGFPAGVR-------------------------------SIL------------ 39 (304)
Q Consensus 4 ~~~a~vg~G~~~~~v~~~l~~-~~~g~~~p~G~c-------------------------------~iv------------ 39 (304)
+++|+||+|++++||+++|.+ + |+.+++|+| ++|
T Consensus 121 ~~~v~v~aG~~~~~l~~~l~~~~--Gl~~~~G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~~evV~~d~~G~i~~v~ 198 (530)
T 2y3s_A 121 RGAFAVEAGATLGAVYKTLFRVW--GVTLPGGACPDVGAGGHILGGGYGPLSRMHGSIVDYLHAVEVVVVDASGDARTVI 198 (530)
T ss_dssp TTEEEEETTCBHHHHHHHHHHHH--SCCCCCCSCTTCBHHHHHHTTCCCTTHHHHCCGGGGEEEEEEEEECTTSCEEEEE
T ss_pred CCEEEEeCCCCHHHHHHHHHhhc--CeEEeCCCCCCCCcCCCcCCCCCCcccccccchhhheeeEEEEEecCCCcEEEEe
Confidence 579999999999999999985 5 899999988 333
Q ss_pred ecCC-CCch--hHHHhhcCCCCceEEEEEEEEEE------------EecCC-eEEEEEEEecch----hhHHHHHHHHHH
Q 047970 40 DRKS-MGED--LFWALHGGGAASFGIIVAWKVNL------------VPVPS-NVTVNTVTRTLE----QDATKIFQKWQS 99 (304)
Q Consensus 40 ~~~~-~~~D--LfWAlRGgG~~nfGVVT~~~~k~------------~~~~~-~~~~~~~~~~~~----~~~~~~l~~~~~ 99 (304)
++.+ +|+| ||||+||||+|+|||||+++||+ +|.|+ .++.+.+.|+.+ +.+.++++.|++
T Consensus 199 ~~~~~~~~d~DLf~a~rG~g~g~fGIVt~~~l~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 278 (530)
T 2y3s_A 199 ATREPSDPNHDLWWAHTGGGGGNFGVVVRYWLRTAEADVPPEPGRLLPRPPAEVLLNTTVWPWEGLDEAAFARLVRNHGR 278 (530)
T ss_dssp EESCTTCTTHHHHHHTTTSCTTSSCEEEEEEECCCCSSCCSCGGGSSCCCCSEEEEEEEEEESTTCCHHHHHHHHHHHHH
T ss_pred ccccccCCChHHHHHHhcCCCCCcEEEEEEEEEeecccCccccccccCCCCceEEEEEEEecccccCHHHHHHHHHHHHH
Confidence 2333 5565 99999998778999999999999 99864 577888888762 235789999999
Q ss_pred Hhcc--CCCCCc--eEEEEEee-CCceEEEEEEEEecChhhhhhhhhhhhhhccc----cC-CCcccceEeCHHHHHHHh
Q 047970 100 AADK--LPEDLT--CSAIFAVR-NSNIVALFSSLFLGRADQQWATYSHWVESLPE----LG-LKKEDCMELSWVESIVYF 169 (304)
Q Consensus 100 ~~~~--~p~~l~--~~~~~~~~-~g~~~~~~~~~~~G~~~e~~~~~~~l~~~l~~----~~-~~~~~~~~~~y~~~~~~~ 169 (304)
|... .|++.. ....+... .....+.+...|.|+.++++ +.|++++.. ++ +....+..++|.+.+..+
T Consensus 279 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~---~~l~p~~~~l~~~~g~~~~~~~~~~~~~~~~~~~ 355 (530)
T 2y3s_A 279 WFEQNSGPDSPWCDLYSVLALTRSQSGALAMTTQLDATGPDAE---KRLETYLAAVSEGVGVQPHSDTRRLPWLHSTRWP 355 (530)
T ss_dssp HHHHSCSTTCGGGGEEEEEEEECGGGSEEEEEEEEECCSTTHH---HHHHHHHHHHHTTCSSCCEEEEEEEEHHHHTTCH
T ss_pred HhhhcCCCCcccceeEEEEEeccCCCCcEEEEEEEeCCHHHHH---HHHHHHHHHHHhhcCCCccceeeeccHHHHHHhh
Confidence 8754 566532 22222222 11124556667889988888 666664321 33 223557788999854322
Q ss_pred hccccccchhhhhhhhcccCCccceeeeecccCCCCCHHHHHHHHHHHHhcC--CccEEEEEEecCccccCCCCCCCccc
Q 047970 170 DRGFLAKDLLKLETLLDRNYSKSFWKMRADFVMKPILVKGLEGMYDFFHEQG--GKNLQVVAFPYSGKLAKIPESAISFP 247 (304)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~~i~~l~~~~~~~p--~~~~~v~~~~~gGa~~~~~~~~tAf~ 247 (304)
. .. ........++.++.++.++++++.++.+++.+.+.+ .+.+.+.++.+||++++++.++|||+
T Consensus 356 ~------------~~-~~~~~~~r~~~~s~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~GGav~~~~~~~ta~~ 422 (530)
T 2y3s_A 356 G------------IA-GDGDMTGRAKIKAAYARRSFDDRQIGTLYTRLTSTDYDNPAGVVALIAYGGKVNAVPADRTAVA 422 (530)
T ss_dssp H------------HH-CCCCCCSEEEEEEEEESSCCCHHHHHHHHHHHHCSSSCCTTCEEEEEECCGGGGGSCTTSSSCC
T ss_pred c------------CC-CCCcccccceeeccccccCCCHHHHHHHHHHHHhcCCCCCceEEEEEecCCccccCCCCcCccc
Confidence 1 11 000001234668888886799999999999987643 34578899999999999999999999
Q ss_pred cccccEee-----cCCh-------HHHHHHHHccccccC------CCCCceeccCCCCCCCCCCC
Q 047970 248 HRAGNIYH-----WMEP-------NLVRKLSNYTTPYVS------KNPRATYLNVRDLEIGRNNK 294 (304)
Q Consensus 248 ~R~~~~~~-----w~~~-------~w~~~~~~~l~~~~~------~~~~g~YvNy~d~~~~~~~~ 294 (304)
||++.+.+ |.++ +|++++++.+.+... ....|+|+||+|.+++..+|
T Consensus 423 ~R~~~~~~~~~~~w~~~~~~~~~~~w~~~~~~~l~~~~~g~p~~~~~~~g~Y~Ny~d~~~~~~~~ 487 (530)
T 2y3s_A 423 QRDSILKIVYVTTWEDPAQDPVHVRWIRELYRDVYADTGGVPVPGGAADGAYVNYPDVDLADEEW 487 (530)
T ss_dssp CCSCSEEEEEEEEECCTTCHHHHHHHHHHHHHHHTGGGTTSCCTTTTBCCCCTTSCCGGGGCTTT
T ss_pred ccccceeEEEEEecCCCcchHHHHHHHHHHHHHHHhhhcCCCcccCCCCceEeCCcCcccccccc
Confidence 99987665 8653 999999999873211 11358999999999887654
No 8
>2ipi_A Aclacinomycin oxidoreductase (aknox); anthracycline, flavoenzyme, twinning, MAD; HET: AKY FAD; 1.65A {Streptomyces galilaeus}
Probab=100.00 E-value=1.9e-32 Score=267.29 Aligned_cols=270 Identities=19% Similarity=0.293 Sum_probs=195.8
Q ss_pred ccEEEEeCCCcHHHHHHHHH-hcCCceeecCcce-------------------------------EEE-e----------
Q 047970 4 KKTAWVQAGVTIGELYHRIS-EKSKYLGFPAGVR-------------------------------SIL-D---------- 40 (304)
Q Consensus 4 ~~~a~vg~G~~~~~v~~~l~-~~~~g~~~p~G~c-------------------------------~iv-~---------- 40 (304)
.++|+||+|++++||+++|. ++ |+++|+|.| ++| +
T Consensus 118 ~~~v~v~aG~~~~~l~~~l~~~~--Gl~~~~G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~~evV~~d~~G~i~~~~ 195 (521)
T 2ipi_A 118 KRAFAVEPGATLGETYRALYLDW--GVTIPAGVCPQVGVGGHVLGGGYGPLSRRDGVVADHLYAVEVVVVDASGRARKVV 195 (521)
T ss_dssp TTEEEECTTSBHHHHHHHHHHHH--SBCCCCCSCTTCBHHHHTTTTCCCTTHHHHCCGGGGEEEEEEEEECTTSCEEEEE
T ss_pred CCEEEEeCCcCHHHHHHHHHHhc--CceeCCCCCCCcccCCcccCCCCCccccccccHhhcEEEEEEEEecCCccEEEEe
Confidence 67999999999999999998 65 999999998 444 3
Q ss_pred -cCC-CCch--hHHHhhcCCCCceEEEEEEEEEE-----------EecCC-eEEEEEEEecch----hhHHHHHHHHHHH
Q 047970 41 -RKS-MGED--LFWALHGGGAASFGIIVAWKVNL-----------VPVPS-NVTVNTVTRTLE----QDATKIFQKWQSA 100 (304)
Q Consensus 41 -~~~-~~~D--LfWAlRGgG~~nfGVVT~~~~k~-----------~~~~~-~~~~~~~~~~~~----~~~~~~l~~~~~~ 100 (304)
+.+ +||| ||||+||||+|||||||+++||+ +|.|+ .++.+.+.|+++ +.+.++++.|++|
T Consensus 196 ~~~~~~~~~~DLf~a~rGgg~g~fGIVt~~~l~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 275 (521)
T 2ipi_A 196 ATSAADDPNRELWWAHTGGGGGNFGIVTRYWFRTPGATGTDPSQLLPKAPTSTLRHIVTWDWSALTEEAFTRIIDNHGAW 275 (521)
T ss_dssp EECCTTCTTHHHHHHTTTSCSSSSCEEEEEEECCSSCCSSCGGGSSCBCCSCEEEEEEEEESTTCCHHHHHHHHHHHHHH
T ss_pred cccccCCCCHHHHHHHhcCCCCceEEEEEEEEEeecccCCCcccccCCCCceEEEEEEEecccccCHHHHHHHHHHHHHH
Confidence 222 5564 99999998769999999999999 99864 577788888762 2347899999998
Q ss_pred hcc--CCCC----CceEEEEEeeCCceEEEEEEEEecChhhhhhhhhhhhhhccc----cC-CCcccceEeCHHHHHHHh
Q 047970 101 ADK--LPED----LTCSAIFAVRNSNIVALFSSLFLGRADQQWATYSHWVESLPE----LG-LKKEDCMELSWVESIVYF 169 (304)
Q Consensus 101 ~~~--~p~~----l~~~~~~~~~~g~~~~~~~~~~~G~~~e~~~~~~~l~~~l~~----~~-~~~~~~~~~~y~~~~~~~ 169 (304)
... .|++ +...+.+... ....+.+...|.|+.++++ +.+++++.. ++ +....+..++|.+....+
T Consensus 276 ~~~~~~p~~~~~~l~~~~~~~~~-~~~~~~~~~~~~g~~~~~~---~~l~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~ 351 (521)
T 2ipi_A 276 HQSNSAAGTPYASMHSVFYLNSR-AAGQILLDIQIDGGLDGAE---ALLNDFVAAVNEGTGVEPAVQRSTEPWLRATLAN 351 (521)
T ss_dssp HHHSCSSSSGGGGCEEEEEEECT-TSCEEEEEEEEETTSTTHH---HHHHHHHHHHTTTCSSCCEEEEEEECHHHHHTCC
T ss_pred HHhccCCCccccceEEEEEeccC-CCCceEEEEEeccCHHHHH---HHHHHHHHHHHhhcCCCccceeeecCHHHHHHhh
Confidence 754 5665 3333333221 1124556667889988887 666664322 33 223556788999864322
Q ss_pred hccccccchhhhhhhhcccCCccceeeeecccCCCCCHHHHHHHHHHHHhcCCccEEEEEEecCccccCCCCCCCccccc
Q 047970 170 DRGFLAKDLLKLETLLDRNYSKSFWKMRADFVMKPILVKGLEGMYDFFHEQGGKNLQVVAFPYSGKLAKIPESAISFPHR 249 (304)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~~i~~l~~~~~~~p~~~~~v~~~~~gGa~~~~~~~~tAf~~R 249 (304)
. .. . .+..+++.++.++.++++++.++.+++.+.+.+.+.+.+.++.+||++++++.++|||+||
T Consensus 352 ~------------~~--~-~~~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~GG~v~~~~~~~ta~~~R 416 (521)
T 2ipi_A 352 K------------FD--T-GGFDRTKSKGAYLRKPWTAAQAATLYRHLSADSQVWGEVSLYSYGGKVNSVPETATATAQR 416 (521)
T ss_dssp C------------CC--C-TTCCEEEEEEEEESSCCCHHHHHHHHHHHHSCCSSEEEEEEEECCGGGGGSCTTTSSCCCC
T ss_pred c------------CC--C-CCCccceeeccccccCCCHHHHHHHHHHHHhCCCCceEEEEEecCCcccCCCCcccccccc
Confidence 1 10 0 1112345678888767999999999999887666667899999999999999999999999
Q ss_pred cccEee-----cCCh-------HHHHHHHHccccccC------CCCCceeccCCCCCCCCCCC
Q 047970 250 AGNIYH-----WMEP-------NLVRKLSNYTTPYVS------KNPRATYLNVRDLEIGRNNK 294 (304)
Q Consensus 250 ~~~~~~-----w~~~-------~w~~~~~~~l~~~~~------~~~~g~YvNy~d~~~~~~~~ 294 (304)
++.+.+ |.++ +|++++++.+.+... ....|+|+||+|.+++..+|
T Consensus 417 ~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~g~Y~Ny~d~~~~~~~~ 479 (521)
T 2ipi_A 417 DSIIKVWMSATWMDPAHDDANLAWIREIYREIFATTGGVPVPDDRTEGTFINYPDVDLVDERW 479 (521)
T ss_dssp SCSEEEEEEEEESCGGGHHHHHHHHHHHHHHHTTTTTSSCCSSSSBCCCCTTSCCGGGGCTTT
T ss_pred chhhhcceeEecCCCCchHHHHHHHHHHHHHHHhhhcCCCcccCCCCceEeCCCCcccccccc
Confidence 987665 8653 999999999873211 01358999999998876543
No 9
>2wdx_A Putative hexose oxidase; oxidoreductase-antibiotic complex, glycopeptide; HET: FAD GHP 3MY 3FG OMY BMA NAG N1L T55; 2.30A {Nonomuraea SP} PDB: 2wdw_A*
Probab=100.00 E-value=5.6e-33 Score=271.01 Aligned_cols=269 Identities=17% Similarity=0.295 Sum_probs=194.9
Q ss_pred cccEEEEeCCCcHHHHHHHHHh-cCCceeecCcce-------------------------------EEE-e---------
Q 047970 3 RKKTAWVQAGVTIGELYHRISE-KSKYLGFPAGVR-------------------------------SIL-D--------- 40 (304)
Q Consensus 3 ~~~~a~vg~G~~~~~v~~~l~~-~~~g~~~p~G~c-------------------------------~iv-~--------- 40 (304)
++++|+||+|++++||+++|.+ + |+.+|+|+| ++| +
T Consensus 119 ~~~~v~v~aG~~~~~l~~~l~~~~--Gl~~~~G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~~evV~~d~~G~v~~~ 196 (523)
T 2wdx_A 119 SMNAFLIEPGNTLSEVYEKLYLGW--NVTIPGGVCGGVGVGGHICGGGYGPLSRQFGSVVDYLYAVEVVVVNKQGKARVI 196 (523)
T ss_dssp TTTEEEECTTCBHHHHHHHHHHHH--SCCCCCCCCTTCBHHHHHHHTCCCTTHHHHCCGGGGEEEEEEEEECTTSCEEEE
T ss_pred CCCEEEEcCCCCHHHHHHHHHHhc--CeEEccCCCCCCeeCccccCCCCCcccccccChhheEEEEEEEEecCCccEEEE
Confidence 3679999999999999999984 5 899999988 343 2
Q ss_pred --cCC-CCch--hHHHhhcCCCCceEEEEEEEEEE-----------EecCC-eEEEEEEEecch----hhHHHHHHHHHH
Q 047970 41 --RKS-MGED--LFWALHGGGAASFGIIVAWKVNL-----------VPVPS-NVTVNTVTRTLE----QDATKIFQKWQS 99 (304)
Q Consensus 41 --~~~-~~~D--LfWAlRGgG~~nfGVVT~~~~k~-----------~~~~~-~~~~~~~~~~~~----~~~~~~l~~~~~ 99 (304)
+.. +|+| ||||+||||+|||||||+++||+ ||.|+ .++.+.+.|+.+ +.+.++++.|++
T Consensus 197 ~~~~~~~~~~~DLf~a~rGgg~g~~GIVt~~~l~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 276 (523)
T 2wdx_A 197 VATRERDDPHHDLWWAHTGGGGGNFGVVTKYWMRVPEDVGRNPERLLPKPPATLLTSTVTFDWAGMTEAAFSRLLRNHGE 276 (523)
T ss_dssp EEESCTTCTTHHHHHHTTTSCSSSSSEEEEEEECCSSCCCSCGGGSSCCCCSEEEEEEEECCGGGCCHHHHHHHHHHHHH
T ss_pred ecccccCCCChHHHHHhhccCCCCcEEEEEEEEEeecccCCCcccccCCCcccEEEEEEEecccccCHHHHHHHHHHHHH
Confidence 332 5566 99999998779999999999999 99874 577888888762 235789999999
Q ss_pred Hhcc--CCCCC----ceEEEEEee-CC--ceEEEEEEEEecChhhhhhhhhhhhhhccc----cC-CCcccceEeCHHHH
Q 047970 100 AADK--LPEDL----TCSAIFAVR-NS--NIVALFSSLFLGRADQQWATYSHWVESLPE----LG-LKKEDCMELSWVES 165 (304)
Q Consensus 100 ~~~~--~p~~l----~~~~~~~~~-~g--~~~~~~~~~~~G~~~e~~~~~~~l~~~l~~----~~-~~~~~~~~~~y~~~ 165 (304)
|... .|++. ...+.+... .+ .+.+.+..+|.|+.++++ +.+++++.. ++ +....+..++|.+.
T Consensus 277 ~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~---~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~ 353 (523)
T 2wdx_A 277 WYERNSGPDSPYTGLWSQLMIGNEVPGMGESGFMMPIQVDATRPDAR---RLLDAHIEAVIDGVPPAEVPEPIEQRWLAS 353 (523)
T ss_dssp HHHHSCSTTCGGGGEEEEEEEECCCTTCTTCSEEEEEEEETTSTTHH---HHHHHHHHHHHTTCTTCBCCCCEEEETTSS
T ss_pred HHhhcCCCCccccceEEEEEeccCCCCCcceeEEEEEEEeCCHHHHH---HHHHHHHHHHHhhcCCCccccceeccHHHH
Confidence 9754 57763 332323221 22 346777888999988888 666664322 23 22345667787663
Q ss_pred HHHhhccccccchhhhhhhhcccCCccceeeeecccCCCCCHHHHHHHHHHHHhc-CCccEEEEEEecCccccCCCCCCC
Q 047970 166 IVYFDRGFLAKDLLKLETLLDRNYSKSFWKMRADFVMKPILVKGLEGMYDFFHEQ-GGKNLQVVAFPYSGKLAKIPESAI 244 (304)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~~i~~l~~~~~~~-p~~~~~v~~~~~gGa~~~~~~~~t 244 (304)
...+ ... . . +++.++.++.++++++.++.+++.+.+. +.+.+.+.++.+||++++++.++|
T Consensus 354 ~~~~------------~~~----~-~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~v~~~~~~~t 415 (523)
T 2wdx_A 354 TPGR------------GGR----G-P-ASKTKAGYLRKRLTDRQIQAVYENMTHMDGIDYGAVWLIGYGGKVNTVDPAAT 415 (523)
T ss_dssp CCCC------------CSS----C-C-EEEEEEEEESSCCCHHHHHHHHHHHTCCTTCSEEEEEEEECCGGGGGSCTTTS
T ss_pred HHhh------------cCC----C-C-ceeeecccccCCCCHHHHHHHHHHHHhcCCCCceEEEEEecCCccccCCCccc
Confidence 2111 110 1 1 3456888887669999999999988653 335677899999999999999999
Q ss_pred ccccccccEee-----cCCh-------HHHHHHHHccc------cccCCCCCceeccCCCCCCCCCCC
Q 047970 245 SFPHRAGNIYH-----WMEP-------NLVRKLSNYTT------PYVSKNPRATYLNVRDLEIGRNNK 294 (304)
Q Consensus 245 Af~~R~~~~~~-----w~~~-------~w~~~~~~~l~------~~~~~~~~g~YvNy~d~~~~~~~~ 294 (304)
||+||++.+.+ |.++ +|++++++.+. |+..+...|+|+||+|.+++..+|
T Consensus 416 a~~~R~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~l~~~~~g~p~~~~~~~g~Y~Ny~d~~~~~~~~ 483 (523)
T 2wdx_A 416 ALPQRDAILKVNYITGWANPGNEAKHLTWVRKLYADVYAETGGVPVPNDVSDGAYINYPDSDLADPGL 483 (523)
T ss_dssp SCCCCSCSEEEEEEEEESSGGGHHHHHHHHHHHHHHHTGGGTTSCCSCSSBCCCCTTSCCGGGGCTTT
T ss_pred cccccCceEEEEEEEEcCCCccHHHHHHHHHHHHHHHHhhhcCCCccCCCCCcceecCCccccccccc
Confidence 99999987665 8653 99999999987 321111358999999999876655
No 10
>2bvf_A 6-hydroxy-D-nicotine oxidase; autoflavinylation, enantiomeric substrates, flavoenzymes, NI degradation; HET: FAD; 1.92A {Arthrobacter nicotinovorans} PDB: 2bvg_A* 2bvh_A*
Probab=99.97 E-value=8e-31 Score=252.38 Aligned_cols=260 Identities=17% Similarity=0.196 Sum_probs=191.8
Q ss_pred ccEEEEeCCCcHHHHHHHHHhcCCceeecCcce--------------------------------------EEE-ecCCC
Q 047970 4 KKTAWVQAGVTIGELYHRISEKSKYLGFPAGVR--------------------------------------SIL-DRKSM 44 (304)
Q Consensus 4 ~~~a~vg~G~~~~~v~~~l~~~~~g~~~p~G~c--------------------------------------~iv-~~~~~ 44 (304)
+++|+||+|++++||+++|.++ |+++|+|.| +++ +++++
T Consensus 100 ~~~v~v~aG~~~~~l~~~l~~~--Gl~~~~g~~~~~gi~G~~~gGg~g~~~~~~G~~~d~v~~~~vV~~~G~i~~~~~~~ 177 (459)
T 2bvf_A 100 GSRARIGGGVISGDLVKEAAKF--GLAAVTGMHPKVGFCGLALNGGVGFLTPKYGLASDNILGATLVTATGDVIYCSDDE 177 (459)
T ss_dssp TTEEEEETTCBHHHHHHHHHTT--TEEECCCSCTTSBHHHHHTTCCCCTTHHHHCCGGGGEEEEEEECTTSCEEEEESSS
T ss_pred CCEEEECCCCCHHHHHHHHHHc--CCEecCCCCCCcccceeecCCCCccccccccCHhHhEEEEEEEcCCCeEEEeCCCC
Confidence 6799999999999999999995 999999888 455 67788
Q ss_pred CchhHHHhhcCCCCceEEEEEEEEEEEecCCeEEEEEEEecchhhHH--HHHHHHHHHhccCCCCCceEEEEEee-CCce
Q 047970 45 GEDLFWALHGGGAASFGIIVAWKVNLVPVPSNVTVNTVTRTLEQDAT--KIFQKWQSAADKLPEDLTCSAIFAVR-NSNI 121 (304)
Q Consensus 45 ~~DLfWAlRGgG~~nfGVVT~~~~k~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~~~~~~p~~l~~~~~~~~~-~g~~ 121 (304)
|+|||||+|||| |+|||||+++||++|.|..+..+.+.|+. ++.. ++++.++++...+|+.+...+.+... .+.+
T Consensus 178 ~~dLf~a~rg~~-g~~GiVt~~~l~l~p~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (459)
T 2bvf_A 178 RPELFWAVRGAG-PNFGVVTEVEVQLYELPRKMLAGFITWAP-SVSELAGLLTSLLDALNEMADHIYPSVFVGVDENRAP 255 (459)
T ss_dssp SHHHHHHHHHHG-GGTCEEEEEEEEEEECCCCEEEEEEEECC-CHHHHHHHHHHHHHHHHHTTTTCCCEEEEEECTTCCE
T ss_pred ChhhHhHhhccC-CccEEEEEEEEEEEECCCcEEEEEEEech-HHhhHHHHHHHHHHHHHhCcHhhccccccCcccCCCc
Confidence 999999999998 89999999999999997677788888876 3356 89999999988788887554422221 2456
Q ss_pred EEEEEEEEecChhhhhhhhhhhhhhccccCC-CcccceEeCHHHHHHHhhccccccchhhhhhhhcccCCccceee-eec
Q 047970 122 VALFSSLFLGRADQQWATYSHWVESLPELGL-KKEDCMELSWVESIVYFDRGFLAKDLLKLETLLDRNYSKSFWKM-RAD 199 (304)
Q Consensus 122 ~~~~~~~~~G~~~e~~~~~~~l~~~l~~~~~-~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~s~ 199 (304)
.+.+.+.|.|+.++++ +.++++ ..+++ ....+..++|.+.... . ...+..+.+...+.. ++.
T Consensus 256 ~~~~~~~~~g~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~-----------~~~~~~~~~~~~~~~~~s~ 319 (459)
T 2bvf_A 256 SVTVCVGHLGGLDIAE---RDIARL-RGLGRTVSDSIAVRSYDEVVAL-N-----------AEVGSFEDGMSNLWIDREI 319 (459)
T ss_dssp EEEEEEECCSCHHHHH---HHHHHH-HTTSCCSEECCEEECHHHHHHH-H-----------HHHSCCCCSCEEEEEEEEE
T ss_pred eEEEEEEEeCCHHHHH---HHHHHH-HHhCcchhcceeecCHHHHHhc-c-----------cccccCCCCCcceEecccc
Confidence 6677788999998888 777775 34432 3356788999985432 1 101011122233333 788
Q ss_pred ccCCCCCHHHHHHHHHHHHhcC-Cc-cEEEEEEecCccccCCCCCCCccccccccEee-----cCCh--------HHHHH
Q 047970 200 FVMKPILVKGLEGMYDFFHEQG-GK-NLQVVAFPYSGKLAKIPESAISFPHRAGNIYH-----WMEP--------NLVRK 264 (304)
Q Consensus 200 ~~~~~l~~~~i~~l~~~~~~~p-~~-~~~v~~~~~gGa~~~~~~~~tAf~~R~~~~~~-----w~~~--------~w~~~ 264 (304)
+++++++.+.++.+++.+.+.+ .+ .+.+.+ +||++.+ .+.|||+||++.+ + |.++ +|+++
T Consensus 320 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~gg~~~~--~~~ta~~~R~~~~-~~~~~~w~~~~~~~~~~~~~~~~ 394 (459)
T 2bvf_A 320 AMPNARFAEAIAGNLDKFVSEPASGGSVKLEI--EGMPFGN--PKRTPARHRDAMG-VLALAEWSGAAPGSEKYPELARE 394 (459)
T ss_dssp CSCHHHHHHHHHTTGGGCEEETTTTEEEEEEE--ECCCCCC--TTCCSSCCCSSCE-EEEEEEECTTSTTTTHHHHHHHH
T ss_pred ccCCCCCHHHHHHHHHHHhhCCCCCceeEEEE--eCCccCC--CCCCCcccCCcce-EEEEEEeCCCccchHHHHHHHHH
Confidence 8874478888988888887666 43 333444 4888776 6789999999876 4 7431 89999
Q ss_pred HHHccccccCCCCCceeccCCCCC
Q 047970 265 LSNYTTPYVSKNPRATYLNVRDLE 288 (304)
Q Consensus 265 ~~~~l~~~~~~~~~g~YvNy~d~~ 288 (304)
+++.+.++..+...|.|+||+|.+
T Consensus 395 ~~~~l~~~~~~p~~g~Y~N~~d~~ 418 (459)
T 2bvf_A 395 LDAALLRAGVTTSGFGLLNNNSEV 418 (459)
T ss_dssp HHHHHHHTTCEEEEECCGGGCSSC
T ss_pred HHHHhcccccCCCCCeeeCCCCCc
Confidence 999999985211247899999986
No 11
>1w1o_A Cytokinin dehydrogenase 1; flavin, oxidoreductase, flavoprotein, FAD; HET: NAG FAD; 1.7A {Zea mays} SCOP: d.58.32.4 d.145.1.1 PDB: 1w1q_A* 1w1r_A* 1w1s_A* 3dq0_A* 2qkn_A* 3c0p_A* 3bw7_A* 2qpm_A* 3kjm_A*
Probab=99.39 E-value=1.9e-12 Score=126.53 Aligned_cols=79 Identities=16% Similarity=0.186 Sum_probs=65.6
Q ss_pred ccEEEEeCCCcHHHHHHHHHhcCCceeecCcce---------------------------------------EEE-ecCC
Q 047970 4 KKTAWVQAGVTIGELYHRISEKSKYLGFPAGVR---------------------------------------SIL-DRKS 43 (304)
Q Consensus 4 ~~~a~vg~G~~~~~v~~~l~~~~~g~~~p~G~c---------------------------------------~iv-~~~~ 43 (304)
.++|+||+|+++.+|++++.++ |+..+.+.| +++ ++.+
T Consensus 139 ~~~v~v~aGv~~~~l~~~~~~~--Gl~~~~~~~~~~~tvGG~v~~~g~g~~~~~yG~~~d~v~~~evV~~dG~v~~~~~~ 216 (534)
T 1w1o_A 139 GRYVDAGGEQVWIDVLRASLAR--GVAPRSWTDYLYLTVGGTLSNAGISGQAFRHGPQISNVLEMDVITGHGEMVTCSKQ 216 (534)
T ss_dssp SSEEEEETTCBHHHHHHHHHTT--TEEESCCCSSCCSBHHHHHTTCCCSTTHHHHCCGGGSEEEEEEEETTSCEEEEESS
T ss_pred CCEEEECCCcCHHHHHHHHHHC--CCcccCCCCCCCEEeceeccCCCccccccccccHhhhEEEEEEEeCCccEEEECCC
Confidence 5689999999999999999985 887654321 455 6777
Q ss_pred CCchhHHHhhcCCCCceEEEEEEEEEEEecCCeEEEEEEEec
Q 047970 44 MGEDLFWALHGGGAASFGIIVAWKVNLVPVPSNVTVNTVTRT 85 (304)
Q Consensus 44 ~~~DLfWAlRGgG~~nfGVVT~~~~k~~~~~~~~~~~~~~~~ 85 (304)
+|+||||++||++ |+|||||+++||++|.|+....+.+.|.
T Consensus 217 ~~~dL~~~~rGs~-G~~GIVt~~~l~l~p~~~~~~~~~~~~~ 257 (534)
T 1w1o_A 217 LNADLFDAVLGGL-GQFGVITRARIAVEPAPARARWVRFVYT 257 (534)
T ss_dssp SSHHHHHHHTTCT-TCSEEEEEEEEEEEECCSEEEEEEEEES
T ss_pred CChhhHhhhcCCC-CCcEEEEEEEEEEEECCcceEEEEEEeC
Confidence 8999999999999 7999999999999999875555566664
No 12
>4feh_A Oxidoreductase DPRE1; alpha+beta, decaprenylphosphoryl-beta-D-RIBO; HET: FAD; 2.04A {Mycobacterium tuberculosis} PDB: 4fdo_A* 4fdn_A* 4fdp_A* 4ff6_A* 4aut_A* 4f4q_A* 4g3t_A 4g3u_A
Probab=99.28 E-value=1.1e-11 Score=119.38 Aligned_cols=93 Identities=22% Similarity=0.295 Sum_probs=72.0
Q ss_pred cccEEEEeCCCcHHHHHHHHHhcCCceeecC--cce-------------------------------------EEE-ecC
Q 047970 3 RKKTAWVQAGVTIGELYHRISEKSKYLGFPA--GVR-------------------------------------SIL-DRK 42 (304)
Q Consensus 3 ~~~~a~vg~G~~~~~v~~~l~~~~~g~~~p~--G~c-------------------------------------~iv-~~~ 42 (304)
++++|+||+|+++.+|+++|.++ |+++|. |.. +++ ++.
T Consensus 106 ~~~~v~v~aGv~l~~L~~~l~~~--Gl~l~~~~g~~~~tvGGaia~~a~G~~~~~~G~~~d~V~~~evV~~dG~v~~~s~ 183 (481)
T 4feh_A 106 DTKLVDIDAGVNLDQLMKAALPF--GLWVPVLPGTRQVTVGGAIACDIHGKNHHSAGSFGNHVRSMDLLTADGEIRHLTP 183 (481)
T ss_dssp TTTEEEEETTCBHHHHHHHHGGG--TEECSCCCSCSCCBHHHHHHTTCCCTTHHHHCCGGGGEEEEEEECTTSCEEEECS
T ss_pred CCCEEEEcCCccHHHHHHHHHHc--CCEEEEeCCcCccccCCccccccCCCCcccCCCccceEeEEEEEeCCCCEEEeCC
Confidence 46799999999999999999996 887752 221 455 677
Q ss_pred C-CCchhHHHhhcCCCCceEEEEEEEEEEEecCCeEEEEEEEecchhhHHHHHHHHHHH
Q 047970 43 S-MGEDLFWALHGGGAASFGIIVAWKVNLVPVPSNVTVNTVTRTLEQDATKIFQKWQSA 100 (304)
Q Consensus 43 ~-~~~DLfWAlRGgG~~nfGVVT~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 100 (304)
+ +|+|||||+|||+ |+|||||+++||++|.++.. .....+.. .+..++++.+++.
T Consensus 184 ~~~~~dLf~a~rgs~-G~~GIIt~~tl~l~p~~~~~-~~~~~~~~-~~l~~~~~~~~~~ 239 (481)
T 4feh_A 184 TGEDAELFWATVGGN-GLTGIIMRATIEMTPTSTAY-FIADGDVT-ASLDETIALHSDG 239 (481)
T ss_dssp SSTTHHHHHHHTTCT-TTTCEEEEEEEECEECSCSE-EEEEEEEC-SSHHHHHHHHSSS
T ss_pred CCCChHHHHHhhccC-CCceEEEEEEEEEEeCCccE-EEEEEEeC-CCHHHHHHHHHHH
Confidence 7 8999999999998 89999999999999997533 22223333 4478888877654
No 13
>2yvs_A Glycolate oxidase subunit GLCE; oxidoreductase; 2.00A {Thermus thermophilus}
Probab=99.15 E-value=8.7e-11 Score=101.67 Aligned_cols=77 Identities=14% Similarity=0.022 Sum_probs=60.4
Q ss_pred cccEEEEeCCCcHHHHHHHHHhcCCceeecC--cce---------------------------------EEE-ecCC---
Q 047970 3 RKKTAWVQAGVTIGELYHRISEKSKYLGFPA--GVR---------------------------------SIL-DRKS--- 43 (304)
Q Consensus 3 ~~~~a~vg~G~~~~~v~~~l~~~~~g~~~p~--G~c---------------------------------~iv-~~~~--- 43 (304)
+.++|+||+|+++.+|+++|.++ |+.+|+ |+| +++ ++.+
T Consensus 6 ~~~~v~V~aGv~l~~L~~~l~~~--Gl~~~~~Pg~~~~tVGG~v~~nagG~~yG~~D~V~~vevV~~dG~i~~~~~~~~k 83 (219)
T 2yvs_A 6 ADQYLVAPGEADLLEVHARLAGT--GLFPPFPPVELPGGVGGLVARGGFAQTFFFPAEVLGLTFRTPKGRRVRAGGVVVK 83 (219)
T ss_dssp TTTEEEEETTCCHHHHHHHHTTT--TEECSSCSEECTTHHHHHHHTTCSSBSSCGGGGEEEEEEECTTSCEEEEECSSCS
T ss_pred CCCEEEEcCCCcHHHHHHHHHHc--CCEEeccCCCCCCchhheeccCcccccCCCccEEEEEEEEeCCCCEEEECCcccc
Confidence 46789999999999999999985 888776 311 333 3332
Q ss_pred --CCchhHHHhhcCCCCceEEEEEEEEEEEecCCeEEEEEE
Q 047970 44 --MGEDLFWALHGGGAASFGIIVAWKVNLVPVPSNVTVNTV 82 (304)
Q Consensus 44 --~~~DLfWAlRGgG~~nfGVVT~~~~k~~~~~~~~~~~~~ 82 (304)
.++||||+++|++ |+|||||+++||++|.++....+.+
T Consensus 84 n~~gydl~~~~~Gs~-G~lGIVt~~tlrl~p~~~~~~~~~~ 123 (219)
T 2yvs_A 84 NVQGYDLVRLFVGSF-GLLGRAEEVVLRLRPGRAQAFLRRP 123 (219)
T ss_dssp SSSCSCHHHHHTTCT-TTTCEEEEEEEECEECSEEEEEEEE
T ss_pred CCCCcchHHHhccCC-CceEEEEEEEEEEEECCcccEEEEE
Confidence 3489999999998 8999999999999999865444433
No 14
>2exr_A Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin oxidase/dehydrogenase, CKX, structura genomics, protein structure initiative; HET: MSE FAD; 1.70A {Arabidopsis thaliana} PDB: 2q4w_A*
Probab=99.12 E-value=2.6e-10 Score=111.08 Aligned_cols=91 Identities=23% Similarity=0.211 Sum_probs=67.3
Q ss_pred cEEEEeCCCcHHHHHHHHH-hcCCceeecCcc----e-----------------------------------EEE-ecCC
Q 047970 5 KTAWVQAGVTIGELYHRIS-EKSKYLGFPAGV----R-----------------------------------SIL-DRKS 43 (304)
Q Consensus 5 ~~a~vg~G~~~~~v~~~l~-~~~~g~~~p~G~----c-----------------------------------~iv-~~~~ 43 (304)
++|+||+|+++.++++++. ++ |+..+... | +++ ++..
T Consensus 132 ~~v~v~aGv~~~~l~~~~l~~~--Gl~~~~~~s~~~~tiGG~va~ng~G~~~~~yG~~~d~V~~l~vV~~dG~v~~~~~~ 209 (524)
T 2exr_A 132 AFVDVSGGALWEDVLKRCVSEY--GLAPRSWTDYLGLTVGGTLSNAGVSGQAFRYGPQTSNVTELDVVTGNGDVVTCSEI 209 (524)
T ss_dssp EEEEEETTCBHHHHHHHHHHHH--SEECSCCCSCCSSBHHHHHTTCCCCTTHHHHCCGGGSEEEEEEEETTSCEEEEESS
T ss_pred eEEEEeCCcCHHHHHHHHHHHc--CCCCCCCCcCCceeecccCCCCCCcccccccCcHhhhEEEEEEEecCCeEEEECCC
Confidence 7899999999999876655 75 88743311 2 444 5666
Q ss_pred CCchhHHHhhcCCCCceEEEEEEEEEEEecCCeEEEEEEEecchhhHHHHHHHHHHHh
Q 047970 44 MGEDLFWALHGGGAASFGIIVAWKVNLVPVPSNVTVNTVTRTLEQDATKIFQKWQSAA 101 (304)
Q Consensus 44 ~~~DLfWAlRGgG~~nfGVVT~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 101 (304)
+|+||||++||+. |+|||||+++||++|.|+......+.|+. ..+..+....+.
T Consensus 210 ~~~dL~~~~~Gs~-GtlGiIt~~tl~l~p~p~~~~~~~~~f~~---~~~~~~~~~~l~ 263 (524)
T 2exr_A 210 ENSELFFSVLGGL-GQFGIITRARVLLQPAPDMVRWIRVVYTE---FDEFTQDAEWLV 263 (524)
T ss_dssp SSHHHHHHHTTCT-TSSEEEEEEEEEEEECCSEEEEEEEEESC---HHHHHHHHHHHH
T ss_pred CChhHHhHhhcCC-CccEEEEEEEEEEEEcCCeeEEEEEEeCC---HHHHHHHHHHHH
Confidence 8899999999999 89999999999999998755555566643 344444444443
No 15
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=99.08 E-value=5e-10 Score=110.28 Aligned_cols=92 Identities=17% Similarity=0.203 Sum_probs=68.6
Q ss_pred ccEEEEeCCCcHHHHHHHHHhcCCceeecCc-----ce----------------------------EEE-e---------
Q 047970 4 KKTAWVQAGVTIGELYHRISEKSKYLGFPAG-----VR----------------------------SIL-D--------- 40 (304)
Q Consensus 4 ~~~a~vg~G~~~~~v~~~l~~~~~g~~~p~G-----~c----------------------------~iv-~--------- 40 (304)
.++|+||+|+++.+|.++|.++ |+.++.. .| ++| .
T Consensus 204 ~~~v~v~aGv~~~~l~~~l~~~--Gl~~~~~p~s~~~~tvGG~ia~na~G~~~~~yG~~~d~V~~levVl~dG~i~~~~~ 281 (584)
T 2uuu_A 204 EMTACIQVGIMGPELEKQLHKQ--GVSLGHDPDSFEFSTLGGWLATCSSGHQSDKYGDIEDMAVSFRTVTPTGTLELRNG 281 (584)
T ss_dssp TTEEEEETTCBHHHHHHHHHHT--TEECCCCCTTGGGCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEEETTEEECCC--
T ss_pred CCEEEECCCCcHHHHHHHHHHc--CCeeCcCCCccCCeeEeeeccCCCCcccccCcCcHHHheeeEEEEeCCCCEEECCc
Confidence 5789999999999999999995 8887432 12 232 1
Q ss_pred -cCCCCchhHHHhhcCCCCceEEEEEEEEEEEecCCeEEEEEEEecchhhHHHHHHHHHHHh
Q 047970 41 -RKSMGEDLFWALHGGGAASFGIIVAWKVNLVPVPSNVTVNTVTRTLEQDATKIFQKWQSAA 101 (304)
Q Consensus 41 -~~~~~~DLfWAlRGgG~~nfGVVT~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 101 (304)
+.+.++||+|+++|++ |+|||||+++||++|.|+....+.+.|+- ..+.++.++++.
T Consensus 282 ~~~~~g~dl~~~~~Gse-GtlGIIT~~tlrl~p~p~~~~~~~~~f~~---~~~a~~~~~~~~ 339 (584)
T 2uuu_A 282 ARSGAGINYKHIILGSE-GTLGIITEAVMKVHAVPQAVEYYGFLFPT---FAHAVSALQQIR 339 (584)
T ss_dssp -----CCCTHHHHTTCT-TSSCEEEEEEEECEECCSEEEEEEEEESS---HHHHHHHHHHHH
T ss_pred cccCCCcchhhhhccCC-CCcEEEEEEEEEEEecccceEEEEEEcCC---HHHHHHHHHHHH
Confidence 2347899999999999 89999999999999998766666777753 445555555553
No 16
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris}
Probab=99.08 E-value=6e-10 Score=107.19 Aligned_cols=94 Identities=27% Similarity=0.298 Sum_probs=69.0
Q ss_pred cccEEEEeCCCcHHHHHHHHHhcCCceeecC--c---ce-----------------------------------EEE-ec
Q 047970 3 RKKTAWVQAGVTIGELYHRISEKSKYLGFPA--G---VR-----------------------------------SIL-DR 41 (304)
Q Consensus 3 ~~~~a~vg~G~~~~~v~~~l~~~~~g~~~p~--G---~c-----------------------------------~iv-~~ 41 (304)
+.++|+||+|+++.+|+++|.++ |+.+|. | .| +++ ++
T Consensus 114 ~~~~v~V~aGv~~~~l~~~l~~~--Gl~~~~~~~s~~~~tvGG~ia~nagG~~~~~yG~~~d~V~~levV~~dG~v~~~~ 191 (476)
T 3pm9_A 114 SSNTITVEAGAILQRVQEKAAEV--DRLFPLSLGAQGSCTIGGNLSTNAGGTAALAYGLARDMALGVEVVLADGRVMNLL 191 (476)
T ss_dssp TTTEEEEETTCBHHHHHHHHHHT--TEECCCCCTTTTTCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEECTTSCEEECC
T ss_pred CCCeEEECCCcCHHHHHHHHHHh--CCccCCCCCCCCcEEEccccCCCCCCCcccccCcHHHheeEEEEEccCCeEEEcC
Confidence 46789999999999999999995 888653 2 22 333 22
Q ss_pred -----CCCCchhHHHhhcCCCCceEEEEEEEEEEEecCCeEEEEEEEecchhhHHHHHHHHHH
Q 047970 42 -----KSMGEDLFWALHGGGAASFGIIVAWKVNLVPVPSNVTVNTVTRTLEQDATKIFQKWQS 99 (304)
Q Consensus 42 -----~~~~~DLfWAlRGgG~~nfGVVT~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 99 (304)
.+.++||+|+++|++ |+|||||+++||++|.|+......+.|+-.+++.+.+..+++
T Consensus 192 ~~~~k~~~g~dl~~l~~Gs~-GtlGIIt~~tl~l~p~p~~~~~~~~~~~~~~~a~~~~~~~~~ 253 (476)
T 3pm9_A 192 SKLKKDNTGYDLRDLFIGAE-GTLGIITAATLKLFPKPRAVETAFVGLQSPDDALKLLGIAQG 253 (476)
T ss_dssp CCCSCCCSSCCCHHHHTTST-TSSCEEEEEEEECEECCSEEEEEEEEESCHHHHHHHHHHHHH
T ss_pred CcccCCCCCcCHHHHhccCC-CCcEEEEEEEEEEeecCceeEEEEEEcCCHHHHHHHHHHHHH
Confidence 234679999999999 899999999999999987655566666532334444444443
No 17
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=99.04 E-value=6.9e-10 Score=108.04 Aligned_cols=96 Identities=23% Similarity=0.282 Sum_probs=71.9
Q ss_pred ccEEEEeCCCcHHHHHHHHHhcCCceeecCc------ce---------------------------------EEE-ecC-
Q 047970 4 KKTAWVQAGVTIGELYHRISEKSKYLGFPAG------VR---------------------------------SIL-DRK- 42 (304)
Q Consensus 4 ~~~a~vg~G~~~~~v~~~l~~~~~g~~~p~G------~c---------------------------------~iv-~~~- 42 (304)
.++|+||+|+++.+|+++|.++ |+.++.+ .| +++ ++.
T Consensus 122 ~~~v~v~aGv~~~~l~~~l~~~--Gl~~~~~~~p~~~~~~igG~~~~~g~g~~~yG~~~d~v~~~evV~~dG~v~~~~~~ 199 (520)
T 1wvf_A 122 MCYALVEPGVTFGQMYDYIQEN--NLPVMLSFSAPSAIAGPVGNTMDRGVGYTPYGEHFMMQCGMEVVLANGDVYRTGMG 199 (520)
T ss_dssp TTEEEECTTCCHHHHHHHHHHT--TCSEECCCCSSCTTCCHHHHHHTTCBCSSTTCBGGGGEEEEEEECTTSCEEECGGG
T ss_pred CCEEEECCCCCHHHHHHHHHHc--CCcccCCCCCCCCeeeeeecccCCCcCCccccchhhcEeeeEEEcCCCcEEEeCCC
Confidence 6799999999999999999995 8875433 12 344 332
Q ss_pred -CCCchhHHHhhcCCC---------CceEEEEEEEEEEEecCCeEEEEEEEecchhhHHHHHHHHHHHh
Q 047970 43 -SMGEDLFWALHGGGA---------ASFGIIVAWKVNLVPVPSNVTVNTVTRTLEQDATKIFQKWQSAA 101 (304)
Q Consensus 43 -~~~~DLfWAlRGgG~---------~nfGVVT~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 101 (304)
.+|+|||++.||+.| ++|||||+++||++|.|+....+.+.|+..+++.+++..++++.
T Consensus 200 ~~~~~~l~~~~~~~~Gy~l~~l~~g~~lGiVt~~~l~l~p~p~~~~~~~~~f~~~~~~~~~~~~~~~~~ 268 (520)
T 1wvf_A 200 GVPGSNTWQIFKWGYGPTLDGMFTQANYGICTKMGFWLMPKPPVFKPFEVIFEDEADIVEIVDALRPLR 268 (520)
T ss_dssp GSTTCSCTTTCSCCSSCCCHHHHTTSSSCEEEEEEEECEECCSEEEEEEEEECCGGGHHHHHHHHHHHH
T ss_pred cCCCchhHhhhcCCCCcchhhhccCCceEEEEEEEEEEEecCCeEEEEEEEeCCHHHHHHHHHHHHHHH
Confidence 468998777777642 59999999999999998766667777864345666666766664
No 18
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=99.00 E-value=2.2e-09 Score=107.30 Aligned_cols=80 Identities=24% Similarity=0.291 Sum_probs=64.2
Q ss_pred cccEEEEeCCCcHHHHHHHHHhcCCceeecC-----cce-----------------------------------EEE-ec
Q 047970 3 RKKTAWVQAGVTIGELYHRISEKSKYLGFPA-----GVR-----------------------------------SIL-DR 41 (304)
Q Consensus 3 ~~~~a~vg~G~~~~~v~~~l~~~~~g~~~p~-----G~c-----------------------------------~iv-~~ 41 (304)
+.++|+||+|+++.||.++|.++ |+.+|. +.| +|+ ..
T Consensus 272 ~~~~atVeaGv~~~~L~~~L~~~--Gl~lp~dP~S~~~aTIGG~iAtna~G~~s~rYG~~~d~VlgleVVlpdG~i~~~~ 349 (658)
T 4bby_A 272 NNLTAHVEAGITGQELERQLKES--GYCTGHEPDSLEFSTVGGWISTRASGMKKNIYGNIEDLVVHMKVVTPRGVIEKSC 349 (658)
T ss_dssp TTTEEEEETTCBHHHHHHHHHHH--TEECCCCCTTTTTCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEEETTEEEECSC
T ss_pred CCCEEEEecCchHHHHHHHHHHc--CCccCCCCCCccccEEeehhhcCCCCCCccCcCCHHHheeeEEEEeCCCcccccc
Confidence 46799999999999999999996 888753 333 333 21
Q ss_pred ----CCCCchhHHHhhcCCCCceEEEEEEEEEEEecCCeEEEEEEEec
Q 047970 42 ----KSMGEDLFWALHGGGAASFGIIVAWKVNLVPVPSNVTVNTVTRT 85 (304)
Q Consensus 42 ----~~~~~DLfWAlRGgG~~nfGVVT~~~~k~~~~~~~~~~~~~~~~ 85 (304)
....|||+|.++|+. |+|||||+++||++|+|+......+.|+
T Consensus 350 ~~~k~~aGyDL~~L~iGSE-GTLGIITeatLrL~P~P~~~~~~~~~f~ 396 (658)
T 4bby_A 350 QGPRMSTGPDIHHFIMGSE-GTLGVITEATIKIRPTPEYQKYGSVAFP 396 (658)
T ss_dssp CCSSCCSSSCTHHHHTTCT-TSSCEEEEEEEECEECCSEEEEEEEEES
T ss_pred cccccCCCcCHHHHhccCC-CcCcceeeeeeeeccCCccccccccccC
Confidence 234589999999999 8999999999999999976666666665
No 19
>2vfr_A Xylitol oxidase, alditol oxidase; FAD, sugar, polyol, flavin, flavoprotein, oxidoreductase; HET: FAD; 1.1A {Streptomyces coelicolor} PDB: 2vfs_A* 2vft_A* 2vfu_A* 2vfv_A*
Probab=98.87 E-value=4.7e-09 Score=99.53 Aligned_cols=68 Identities=19% Similarity=0.264 Sum_probs=57.0
Q ss_pred cccEEEEeCCCcHHHHHHHHHhcCCceeecC-cce-------------------------------------EEE-ecCC
Q 047970 3 RKKTAWVQAGVTIGELYHRISEKSKYLGFPA-GVR-------------------------------------SIL-DRKS 43 (304)
Q Consensus 3 ~~~~a~vg~G~~~~~v~~~l~~~~~g~~~p~-G~c-------------------------------------~iv-~~~~ 43 (304)
++++|+||+|+++.+|.++|.++ |+.+|. |.+ +++ ++.+
T Consensus 79 ~~~~v~v~aG~~l~~l~~~l~~~--Gl~l~~~~~~~~~tvGG~i~~~~~G~~~~~G~~~d~v~~~~vv~~~G~~~~~~~~ 156 (422)
T 2vfr_A 79 AARTVRVGGGVRYAELARVVHAR--GLALPNMASLPHISVAGSVATGTHGSGVGNGSLASVVREVELVTADGSTVVIARG 156 (422)
T ss_dssp TTTEEEEETTCBHHHHHHHHHHT--TEECSCCCSSSCSBHHHHHHHTCCCCCTTCCCGGGGEEEEEEECTTSCEEEEETT
T ss_pred CCCEEEEcCCCCHHHHHHHHHHc--CCcccCCCCCCCeeHHHHHhcCCCCCCcccCcHHHheEEEEEEeCCCCEEEeCCC
Confidence 36799999999999999999995 888764 332 344 5666
Q ss_pred CCchhHHHhhcCCCCceEEEEEEEEEEEecCC
Q 047970 44 MGEDLFWALHGGGAASFGIIVAWKVNLVPVPS 75 (304)
Q Consensus 44 ~~~DLfWAlRGgG~~nfGVVT~~~~k~~~~~~ 75 (304)
+|+ ||+++|++ |+|||||+++||++|.++
T Consensus 157 ~~~--f~~~~g~~-G~lGvit~~~l~l~p~~~ 185 (422)
T 2vfr_A 157 DER--FGGAVTSL-GALGVVTSLTLDLEPAYE 185 (422)
T ss_dssp STT--GGGTSSCT-TTTCEEEEEEEECEECCE
T ss_pred CCC--cceEEecC-CCCEEEEEEEEEEEecCc
Confidence 777 99999998 899999999999999985
No 20
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=98.66 E-value=8.8e-08 Score=93.95 Aligned_cols=97 Identities=18% Similarity=0.188 Sum_probs=70.0
Q ss_pred cccEEEEeCCCcHHHHHHHHHhcCCcee--ec---C--cce---------------------------------EEE-ec
Q 047970 3 RKKTAWVQAGVTIGELYHRISEKSKYLG--FP---A--GVR---------------------------------SIL-DR 41 (304)
Q Consensus 3 ~~~~a~vg~G~~~~~v~~~l~~~~~g~~--~p---~--G~c---------------------------------~iv-~~ 41 (304)
+.++|+||||+++.+|.++|.++ |+. ++ . |.| +++ ++
T Consensus 136 ~~~~v~v~aGv~~~~l~~~l~~~--Gl~~~~~~~p~~~~~~tigG~~~~~g~g~~~yG~~~d~v~~l~vVl~dG~v~~~~ 213 (560)
T 1e8g_A 136 EGAYCVVEPGVTYHDLHNYLEAN--NLRDKLWLDVPDLGGGSVLGNAVERGVGYTPYGDHWMMHSGMEVVLANGELLRTG 213 (560)
T ss_dssp TTTEEEECTTCBHHHHHHHHHHT--TCTTTEECCCCSSTTSBHHHHHHTTCBCSSTTCBTGGGEEEEEEEETTSCEEECG
T ss_pred CCCEEEEeCCCCHHHHHHHHHHc--CCccccCCCCCCCCccchhhhccCCCCCcccceeHHHheeeeEEEeCCCCEEEec
Confidence 36789999999999999999996 777 52 1 122 333 23
Q ss_pred CC--CCc---------------hhHHHhhcCC----------CCceEEEEEEEEEEEecCCeEEEEEEEecchhhHHHHH
Q 047970 42 KS--MGE---------------DLFWALHGGG----------AASFGIIVAWKVNLVPVPSNVTVNTVTRTLEQDATKIF 94 (304)
Q Consensus 42 ~~--~~~---------------DLfWAlRGgG----------~~nfGVVT~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l 94 (304)
.. .++ +++|+++++| +|+|||||+++||++|.|+....+.+.|+-.+++.+.+
T Consensus 214 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~Gy~l~~L~~~GtlGiIt~~tl~l~p~p~~~~~~~~~f~~~~~a~~~~ 293 (560)
T 1e8g_A 214 MGALPDPKRPETMGLKPEDQPWSKIAHLFPYGFGPYIDGLFSQSNMGIVTKIGIWLMPNPGGYQSYLITLPKDGDLKQAV 293 (560)
T ss_dssp GGGSCCCCCGGGTTCCGGGSCCCTTTTTCSCCSSCCCGGGGSSSSSEEEEEEEEECEECCSCEEEEEEEECSTTHHHHHH
T ss_pred CcccCcccccccccchhhhhhhhcccccccccCCcchhcccccCcEEEEEEEEEEEEeCCCceEEEEEEcCCHHHHHHHH
Confidence 21 232 7888887652 37999999999999999876667777786434566677
Q ss_pred HHHHHHh
Q 047970 95 QKWQSAA 101 (304)
Q Consensus 95 ~~~~~~~ 101 (304)
..++++.
T Consensus 294 ~~~~~~~ 300 (560)
T 1e8g_A 294 DIIRPLR 300 (560)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7777664
No 21
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=98.51 E-value=1.4e-07 Score=92.34 Aligned_cols=50 Identities=14% Similarity=0.099 Sum_probs=36.0
Q ss_pred hhHHHh--hcCCCCceEEEEEEEEEEEecCCeEEEEEEEecchhhHHHHHHHHH
Q 047970 47 DLFWAL--HGGGAASFGIIVAWKVNLVPVPSNVTVNTVTRTLEQDATKIFQKWQ 98 (304)
Q Consensus 47 DLfWAl--RGgG~~nfGVVT~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 98 (304)
||+|++ +|+. |+||| |++++|++|.|+....+.+.|+-.+++.+++..+.
T Consensus 246 Dl~~l~~a~Gse-GtlGV-t~~tl~l~p~p~~~~~~~~~~~~~~~a~~~~~~~~ 297 (571)
T 1f0x_A 246 DPDRLFESSGCA-GKLAV-FAVRLDTFEAEKNQQVFYIGTNQPEVLTEIRRHIL 297 (571)
T ss_dssp CGGGCCSSTTCT-TSSEE-EEEEEECEECCSSCEEEEEEESCHHHHHHHHHHHH
T ss_pred cHHHHHHhcCCC-CceeE-EEEEEEEEecCCeEEEEEEEeCCHHHHHHHHHHHH
Confidence 888877 9998 89999 99999999998766566666653233344444443
No 22
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=98.42 E-value=4.5e-07 Score=88.87 Aligned_cols=67 Identities=15% Similarity=0.168 Sum_probs=53.7
Q ss_pred cccEEEEeCCCcHHHHHHHHHhcCCceeecC------------------cc-----------e-------------EEE-
Q 047970 3 RKKTAWVQAGVTIGELYHRISEKSKYLGFPA------------------GV-----------R-------------SIL- 39 (304)
Q Consensus 3 ~~~~a~vg~G~~~~~v~~~l~~~~~g~~~p~------------------G~-----------c-------------~iv- 39 (304)
++++|+||+|+++.+|+++|.++ |+.+|. |. . ++|
T Consensus 104 ~~~~v~v~aGv~l~~L~~~l~~~--Gl~l~~~~~~~~~TvGG~i~~~~~G~~l~~gG~~~~s~~~~G~~~d~V~~~evV~ 181 (561)
T 2i0k_A 104 PVATVTAGAGASIEAIVTELQKH--DLGWANLPAPGVLSIGGALAVNAHGAALPAVGQTTLPGHTYGSLSNLVTELTAVV 181 (561)
T ss_dssp SSCEEEEETTSBHHHHHHHHHHT--TEECSSCCSCTTCBHHHHHHTTCCCSCCCCTTCCCCTTCCSSCGGGGEEEEEEEE
T ss_pred CccEEEEcCCCCHHHHHHHHHHc--CCcccccCCCCCcccCCCcccCCcccccccCCcccccccccccHhheEEEEEEEe
Confidence 46899999999999999999995 887652 21 1 333
Q ss_pred ----------ecCCCCchhHHHhhcCCCCceEEEEEEEEEEEecCC
Q 047970 40 ----------DRKSMGEDLFWALHGGGAASFGIIVAWKVNLVPVPS 75 (304)
Q Consensus 40 ----------~~~~~~~DLfWAlRGgG~~nfGVVT~~~~k~~~~~~ 75 (304)
+++ +|+||+|+++|.| + ||||+++||++|.+.
T Consensus 182 ~dG~~~~~~~~~~-~~~dl~~a~~g~G-~--giIt~~tl~l~p~~~ 223 (561)
T 2i0k_A 182 WNGTTYALETYQR-NDPRITPLLTNLG-R--CFLTSVTMQAGPNFR 223 (561)
T ss_dssp ECSSSEEEEEEET-TSGGGHHHHSCTT-S--SCEEEEEEECEECCE
T ss_pred CCCCEEEeeeccC-CCccHHHHHhcCC-C--EEEEEEEEEEEECCc
Confidence 333 4899999999877 4 899999999999984
No 23
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=98.32 E-value=7.3e-07 Score=86.46 Aligned_cols=66 Identities=21% Similarity=0.235 Sum_probs=49.9
Q ss_pred ccEEEEeCCCcHHHHHHHHHhcCCceeecC------------------cc------------e------------E----
Q 047970 4 KKTAWVQAGVTIGELYHRISEKSKYLGFPA------------------GV------------R------------S---- 37 (304)
Q Consensus 4 ~~~a~vg~G~~~~~v~~~l~~~~~g~~~p~------------------G~------------c------------~---- 37 (304)
+++|+||+|+++.+|+++|.++ |++++. |. . +
T Consensus 99 ~~tVtV~AGv~l~~L~~~L~~~--GL~l~~~~gi~~~TVGGaia~gagG~~~~~~G~~~~~g~~~G~~~D~V~~levV~a 176 (540)
T 3js8_A 99 VAKVTAQAGITMEALLTGLEKA--GLGVTAAPAPGDLTLGGVLAINGHGTAIPAKGERRLAGASYGSISNLVLSLTAVVY 176 (540)
T ss_dssp SEEEEEETTSBHHHHHHHHHHT--TEECSCCCSCSCSBHHHHHHTTCCCCBCCCTTCCCCTTCCSSCGGGGEEEEEEEEE
T ss_pred ccEEEEccCCCHHHHHHHHHHc--CCEEEecCCCCCeEEcccccCCCCcccccccccccccccccccHHHhEEEEEEEcC
Confidence 4799999999999999999995 887761 11 0 2
Q ss_pred --------EE-ecCCCCchhHHHhhcCCCCceEEEEEEEEEEEecCC
Q 047970 38 --------IL-DRKSMGEDLFWALHGGGAASFGIIVAWKVNLVPVPS 75 (304)
Q Consensus 38 --------iv-~~~~~~~DLfWAlRGgG~~nfGVVT~~~~k~~~~~~ 75 (304)
++ ++. +|+||||+++|+| + ||||+++||++|.+.
T Consensus 177 dG~~~~~~i~~~s~-~~~DL~a~r~G~G--~-gIVTevtlrl~P~~~ 219 (540)
T 3js8_A 177 DKASGAYALRKFAR-NDPQIAPLLAHVG--R-SLIVEATLQAAPNQR 219 (540)
T ss_dssp ETTTTEEEEEEEET-TSGGGHHHHTCTT--S-SCEEEEEEEEEECCE
T ss_pred CCCCceeeEEEeCC-CChhHHHHHhcCC--C-eEEEEEEEEEEECCc
Confidence 33 343 6899966655544 4 699999999999973
No 24
>3tx1_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: FAD; 2.69A {Listeria monocytogenes}
Probab=98.23 E-value=1.2e-06 Score=79.84 Aligned_cols=70 Identities=13% Similarity=0.092 Sum_probs=51.3
Q ss_pred cccEEEEeCCCcHHHHHHHHHhcCCcee---ecCcce-------------------------EEE-ecCC----CCchhH
Q 047970 3 RKKTAWVQAGVTIGELYHRISEKSKYLG---FPAGVR-------------------------SIL-DRKS----MGEDLF 49 (304)
Q Consensus 3 ~~~~a~vg~G~~~~~v~~~l~~~~~g~~---~p~G~c-------------------------~iv-~~~~----~~~DLf 49 (304)
+..+++||+|+++.+|++++.++ |+. ++.|.+ ++| .+-+ .++||+
T Consensus 113 d~~~v~v~aG~~~~~l~~~l~~~--Gl~Gle~~~giPgTVGGav~~NaGgyGg~~~d~v~~vevV~~~G~i~~~~~~~~~ 190 (322)
T 3tx1_A 113 NNTQIVAMSGAKLIDTAKFALNE--SLSGLEFACGIPGSIGGALHMNAGAYGGEISDVLEAATVLTQTGELKKLKRSELK 190 (322)
T ss_dssp ETTEEEEETTSBHHHHHHHHHHT--TEESCGGGTTCCSBHHHHHHHTCEETTEEHHHHEEEEEEECTTSCEEEEEGGGCC
T ss_pred CCCEEEEecCcCHHHHHHHHHHc--CCcccccCCCCcchhHHHHHhCccCcccchHhhEEEEEEEcCCCCEEEechHHcC
Confidence 45689999999999999999996 775 444433 344 2211 357999
Q ss_pred HHhhcCCC-CceEEEEEEEEEEEecC
Q 047970 50 WALHGGGA-ASFGIIVAWKVNLVPVP 74 (304)
Q Consensus 50 WAlRGgG~-~nfGVVT~~~~k~~~~~ 74 (304)
|++|++.- +++||||+++||++|.|
T Consensus 191 ~~yR~s~~g~~~~IIt~~tl~L~p~~ 216 (322)
T 3tx1_A 191 AAYRFSTIAEKNYIVLDATFSLALEE 216 (322)
T ss_dssp --CC-CTTTGGGCEEEEEEEECEECC
T ss_pred cchhhcccCCCCEEEEEEEEEEEeCC
Confidence 99999853 47899999999999987
No 25
>3i99_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural of infectious diseases, csgid; HET: FAD; 2.20A {Vibrio cholerae}
Probab=97.89 E-value=9.9e-06 Score=74.75 Aligned_cols=69 Identities=14% Similarity=0.031 Sum_probs=51.9
Q ss_pred ccEEEEeCCCcHHHHHHHHHhcCCcee---ecC---cce----------------------EEE-e-cC----CCCchhH
Q 047970 4 KKTAWVQAGVTIGELYHRISEKSKYLG---FPA---GVR----------------------SIL-D-RK----SMGEDLF 49 (304)
Q Consensus 4 ~~~a~vg~G~~~~~v~~~l~~~~~g~~---~p~---G~c----------------------~iv-~-~~----~~~~DLf 49 (304)
..+++||+|+.|.+|.+++.++ |+. ... |+. ++| . +- -.+.||+
T Consensus 92 ~~~v~v~AG~~~~~l~~~a~~~--Gl~GlE~l~gIPGtVGGav~~NaGaYG~e~~d~v~~vevv~~~~G~i~~~~~~dl~ 169 (357)
T 3i99_A 92 YHRLHVAGGEDWPSLVSWCVEQ--GIGGLENLALIPGCAGSAPIQNIGAYGVEFKDVCDYVEYLCLETGTVKRLTMEECQ 169 (357)
T ss_dssp EEEEEEETTSBHHHHHHHHHHT--TCTTCGGGTTCCSBGGGTTTTTCEETTEEGGGTEEEEEEEETTTTEEEEEETGGGC
T ss_pred ceEEEEeCCCcHHHHHHHHHHc--CCcCccccCCCCchhHHHHHhchhhhhhhHHhhEeEEEEEECCCCcEEEEeHHHcC
Confidence 4589999999999999999996 663 111 222 344 2 11 1467999
Q ss_pred HHhhcCCC----CceEEEEEEEEEEEecC
Q 047970 50 WALHGGGA----ASFGIIVAWKVNLVPVP 74 (304)
Q Consensus 50 WAlRGgG~----~nfGVVT~~~~k~~~~~ 74 (304)
|+.|+++. +++||||+++||++|.+
T Consensus 170 f~YR~s~~~~~~g~~gIIt~v~f~L~p~~ 198 (357)
T 3i99_A 170 FGYRDSIFKHQLYQKAVVTAVGLKFAKAW 198 (357)
T ss_dssp CBTTBCGGGTTTTTTEEEEEEEEEEESSC
T ss_pred cccccccCCCccCCCEEEEEEEEEEEeCC
Confidence 99999863 37999999999999985
No 26
>1uxy_A MURB, uridine diphospho-N-acetylenolpyruvylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP; HET: FAD EPU; 1.80A {Escherichia coli} SCOP: d.145.1.2 d.146.1.1 PDB: 1mbb_A* 1mbt_A* 2q85_A* 2mbr_A*
Probab=97.49 E-value=0.00011 Score=67.33 Aligned_cols=68 Identities=15% Similarity=-0.059 Sum_probs=50.9
Q ss_pred cEEEEeCCCcHHHHHHHHHhcCCcee---ecC---cce----------------------EEE-e-cCC----CCchhHH
Q 047970 5 KTAWVQAGVTIGELYHRISEKSKYLG---FPA---GVR----------------------SIL-D-RKS----MGEDLFW 50 (304)
Q Consensus 5 ~~a~vg~G~~~~~v~~~l~~~~~g~~---~p~---G~c----------------------~iv-~-~~~----~~~DLfW 50 (304)
.+++||+|++|.+|.+.+.++ |+. ... |+. ++| . +-+ .++||+|
T Consensus 77 ~~v~vgAG~~~~~l~~~~~~~--Gl~Gle~~~gIPGtVGGa~~~NaGayG~ei~d~v~~v~vv~~~~G~v~~~~~~d~~~ 154 (340)
T 1uxy_A 77 WYLHVGAGENWHRLVKYTLQE--GMPGLENLALIPGCVGSSPIQNIGAYGVELQRVCAYVDSVELATGKQVRLTAKECRF 154 (340)
T ss_dssp EEEEEETTSBHHHHHHHHHHT--TCCSCGGGTTCCSBGGGTTTTTCEETTEEGGGTEEEEEEEETTTTEEEEEETGGGTC
T ss_pred eEEEEecCCCHHHHHHHHHHC--CCCccccccCCccchhHHHHhccccchhhHHhheeEEEEEECCCCcEEEEeHHHhcc
Confidence 489999999999999999996 652 211 222 334 2 111 4679999
Q ss_pred HhhcCCC----CceEEEEEEEEEEEecC
Q 047970 51 ALHGGGA----ASFGIIVAWKVNLVPVP 74 (304)
Q Consensus 51 AlRGgG~----~nfGVVT~~~~k~~~~~ 74 (304)
+.|++.- +++||||+++||++|.+
T Consensus 155 gYR~s~~~~~~~~~gIVt~v~~~L~~~~ 182 (340)
T 1uxy_A 155 GYRDSIFKHEYQDRFAIVAVGLRLPKEW 182 (340)
T ss_dssp BTTBCGGGTTTTTTEEEEEEEEEEESSC
T ss_pred ccCcCccCCcCCCCEEEEEEEEEEEcCC
Confidence 9999741 36999999999999985
No 27
>1hsk_A UDP-N-acetylenolpyruvoylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP, flavoprotein, FAD; HET: FAD; 2.30A {Staphylococcus aureus} SCOP: d.145.1.2 d.146.1.1
Probab=97.32 E-value=0.00014 Score=66.33 Aligned_cols=90 Identities=11% Similarity=0.076 Sum_probs=58.2
Q ss_pred cccEEEEeCCCcHHHHHHHHHhcCCce----eecC--cce----------------------EEE-ecCC----CCchhH
Q 047970 3 RKKTAWVQAGVTIGELYHRISEKSKYL----GFPA--GVR----------------------SIL-DRKS----MGEDLF 49 (304)
Q Consensus 3 ~~~~a~vg~G~~~~~v~~~l~~~~~g~----~~p~--G~c----------------------~iv-~~~~----~~~DLf 49 (304)
+.++++||+|+++.+|.+++.++ |+ .+++ |+. ++| .+-+ ...|++
T Consensus 107 d~~~v~v~aGv~~~~l~~~l~~~--Gl~gLe~~~~~PgtvGG~i~~naggyG~~~~d~v~~v~vv~~~G~i~~~~~~~~~ 184 (326)
T 1hsk_A 107 SDDAIIAGSGAAIIDVSRVARDY--ALTGLEFACGIPGSIGGAVYMNAGAYGGEVKDCIDYALCVNEQGSLIKLTTKELE 184 (326)
T ss_dssp ETTEEEEETTSBHHHHHHHHHHT--TEESCGGGTTCCSBHHHHHHHTCEETTEEHHHHEEEEEEECTTSCEEEEETTTTT
T ss_pred cCCEEEEeCCCcHHHHHHHHHHC--CCccccccCCCcchhhHHHhcccccCchhhhhhEEEEEEEeCCCCEEEEChHHcC
Confidence 35689999999999999999995 77 3321 221 344 2221 234899
Q ss_pred HHhhcCC--CCceEEEEEEEEEEEecCCeEEEEEEEecchhhHHHHHHHHHHHh-ccCCCC
Q 047970 50 WALHGGG--AASFGIIVAWKVNLVPVPSNVTVNTVTRTLEQDATKIFQKWQSAA-DKLPED 107 (304)
Q Consensus 50 WAlRGgG--~~nfGVVT~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~p~~ 107 (304)
|+.|+.. +.. ||||+++||++|.++ +....++..+.++. ...|.+
T Consensus 185 ~gyr~~~l~s~g-gIIt~~~l~l~p~~p------------~~~~~~~~~~~~~~~a~~p~~ 232 (326)
T 1hsk_A 185 LDYRNSIIQKEH-LVVLEAAFTLAPGKM------------TEIQAKMDDLTERRESKQPLE 232 (326)
T ss_dssp CBTTBCHHHHTT-CEEEEEEEECEECCH------------HHHHHHHHHHHHHHHHHSCTT
T ss_pred CCccccccCCCC-EEEEEEEEEEEcCCH------------HHHHHHHHHHHHHHHhcCCCC
Confidence 9999742 112 999999999999821 22455666665553 234544
No 28
>2gqt_A UDP-N-acetylenolpyruvylglucosamine reductase; peptidoglycan biosynthesis, enolpyruvyl-UDP-N- acetylglucosamine, flavin adenine dinucleotide; HET: FAD; 1.30A {Thermus caldophilus} PDB: 2gqu_A*
Probab=97.05 E-value=0.0012 Score=58.44 Aligned_cols=83 Identities=18% Similarity=0.280 Sum_probs=56.1
Q ss_pred EEeCCCcHHHHHHHHHhcCCcee-------ecCcce----------------------EEEecC----CCCchhHHHhhc
Q 047970 8 WVQAGVTIGELYHRISEKSKYLG-------FPAGVR----------------------SILDRK----SMGEDLFWALHG 54 (304)
Q Consensus 8 ~vg~G~~~~~v~~~l~~~~~g~~-------~p~G~c----------------------~iv~~~----~~~~DLfWAlRG 54 (304)
+||+|+++.+|.+++.++ |+. +| |+. ++|.+- -.++||+|+.|+
T Consensus 77 ~v~aG~~~~~l~~~~~~~--Gl~Gle~~~giP-GtvGGav~~NaGayG~e~~d~v~~v~vv~~G~v~~~~~~~l~~~YR~ 153 (268)
T 2gqt_A 77 WVGAGTLLPLLVQEAARA--GLSGLEGLLGIP-AQVGGAVKMNAGTRFGEMADALEAVEVFHDGAFHVYCPEELGFGYRK 153 (268)
T ss_dssp EEETTSBHHHHHHHHHHT--TEESCGGGTTCC-CBHHHHHHTTCEETTEEGGGGEEEEEEEETTEEEEECGGGSCCBTTB
T ss_pred EEECCCCHHHHHHHHHHc--CCcCCccccCcc-chhHHHHHhccccCchhHHhheeEEEEECCCcEEEEchHHcccccCC
Confidence 899999999999999996 774 22 222 333111 145799999999
Q ss_pred CCCCceEEEEEEEEEEEecCCeEEEEEEEecchhhHHHHHHHHHHHhccCC
Q 047970 55 GGAASFGIIVAWKVNLVPVPSNVTVNTVTRTLEQDATKIFQKWQSAADKLP 105 (304)
Q Consensus 55 gG~~nfGVVT~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p 105 (304)
++-..=||||+++||++|.+. ++..+.++.+.+.-...|
T Consensus 154 s~~~~~gIVt~~~~~L~~~~~------------~~i~~~~~~v~~~R~~~P 192 (268)
T 2gqt_A 154 SHLPPGGIVTRVRLKLKERPK------------EEILRRMAEVDRARKGQP 192 (268)
T ss_dssp CCCSTTCEEEEEEECCEECCH------------HHHHHHHHHHHHHTTTSC
T ss_pred CCcCCCceEEEEEEEEEeCCH------------HHHHHHHHHHHHHHHhCC
Confidence 872111499999999999841 335555666655543356
Done!