Query 047972
Match_columns 273
No_of_seqs 154 out of 837
Neff 4.4
Searched_HMMs 29240
Date Mon Mar 25 08:21:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047972.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047972hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1jer_A Cucumber stellacyanin; 100.0 1.2E-41 4.1E-46 285.7 6.5 107 65-172 2-111 (138)
2 1ws8_A Mavicyanin; oxidized fo 100.0 1.3E-39 4.6E-44 263.1 6.9 106 65-171 1-106 (109)
3 1x9u_A Umecyanin; cupredoxin, 100.0 6.6E-38 2.2E-42 255.8 7.3 105 67-172 2-108 (116)
4 2cbp_A Cucumber basic protein; 100.0 6.9E-37 2.4E-41 241.9 5.7 96 67-168 1-96 (96)
5 1f56_A Plantacyanin; cupredoxi 100.0 4.4E-33 1.5E-37 218.4 7.3 91 67-168 1-91 (91)
6 1qhq_A Protein (auracyanin); e 99.3 3.4E-12 1.2E-16 103.8 8.9 97 64-168 14-139 (140)
7 1bxv_A Plastocyanin; copper pr 99.3 6.3E-12 2.2E-16 93.9 6.5 86 68-168 4-91 (91)
8 1iuz_A Plastocyanin; electron 99.1 9.7E-11 3.3E-15 89.8 6.6 92 67-168 2-98 (98)
9 1plc_A Plastocyanin; electron 99.1 3.7E-10 1.3E-14 86.2 8.5 91 68-168 2-99 (99)
10 2cal_A Rusticyanin; iron respi 99.1 2.4E-10 8.3E-15 95.9 7.3 76 92-168 62-154 (154)
11 2plt_A Plastocyanin; electron 99.0 3.3E-10 1.1E-14 85.9 5.8 92 67-168 2-98 (98)
12 2aan_A Auracyanin A; cupredoxi 99.0 2.4E-09 8.1E-14 87.0 10.8 95 64-168 16-139 (139)
13 2gim_A Plastocyanin; beta shee 99.0 5.1E-10 1.7E-14 86.0 6.1 89 68-168 5-105 (106)
14 1kdj_A Plastocyanin; electron 99.0 1.1E-09 3.6E-14 83.8 7.6 91 68-168 2-102 (102)
15 1byp_A Protein (plastocyanin); 99.0 1E-09 3.4E-14 83.6 7.0 91 68-168 2-99 (99)
16 1pmy_A Pseudoazurin; electron 99.0 1.8E-09 6.1E-14 87.8 8.6 83 72-170 11-95 (123)
17 1b3i_A PETE protein, protein ( 98.9 4.3E-09 1.5E-13 79.8 9.2 89 68-168 4-97 (97)
18 1paz_A Pseudoazurin precursor; 98.9 2.5E-09 8.6E-14 86.9 8.3 81 72-169 11-94 (123)
19 3erx_A Pseudoazurin; copper pr 98.9 2.1E-09 7.3E-14 87.6 7.3 82 73-169 11-94 (123)
20 3ef4_A Pseudoazurin, blue copp 98.9 6.3E-09 2.2E-13 85.3 8.3 84 72-170 10-96 (124)
21 3tu6_A Pseudoazurin (blue copp 98.8 5E-09 1.7E-13 85.9 6.5 86 71-171 11-98 (127)
22 1pcs_A Plastocyanin; electron 98.8 4.1E-09 1.4E-13 80.0 5.2 91 68-168 4-98 (98)
23 3c75_A Amicyanin; copper prote 98.5 1.6E-07 5.6E-12 76.4 7.2 76 78-168 55-132 (132)
24 4hci_A Cupredoxin 1; structura 98.4 2.7E-07 9.1E-12 70.9 4.6 85 63-168 10-100 (100)
25 3cvb_A Plastocyanin; cupredoxi 98.3 1.5E-06 5.1E-11 66.1 7.3 89 68-168 4-104 (105)
26 3ay2_A Lipid modified azurin p 98.3 1.7E-06 5.7E-11 74.3 8.4 93 66-168 42-166 (167)
27 1cuo_A Protein (azurin ISO-2); 98.3 5.4E-06 1.8E-10 67.9 10.7 91 68-168 4-128 (129)
28 2ov0_A Amicyanin; beta-sandwic 98.2 3E-06 1E-10 65.7 6.8 84 64-168 16-105 (105)
29 2ux6_A Pseudoazurin; type-1 co 98.2 2.2E-06 7.4E-11 69.3 6.2 80 72-169 11-92 (122)
30 1id2_A Amicyanin; beta barrel, 98.2 3.5E-06 1.2E-10 65.7 6.8 87 65-168 18-106 (106)
31 2iaa_C Azurin; quinoprotein, t 98.0 2E-05 6.7E-10 64.6 9.2 91 68-168 3-127 (128)
32 2ccw_A Azurin II, AZN-2; elect 98.0 4.6E-05 1.6E-09 62.4 9.9 92 67-168 3-128 (129)
33 1nwp_A Azurin; electron transp 97.9 2.6E-05 8.8E-10 63.9 8.1 92 67-168 3-128 (128)
34 1iko_P Ephrin-B2; greek KEY, g 97.3 4.8E-05 1.7E-09 66.2 1.0 78 94-171 25-142 (178)
35 1iby_A Nitrosocyanin; RED copp 97.2 0.00062 2.1E-08 52.7 6.5 66 92-168 39-111 (112)
36 2cua_A Protein (CUA); CUA cent 97.1 0.0019 6.6E-08 53.0 8.0 66 92-168 61-134 (135)
37 3fsa_A Azurin; copper, cupredo 96.9 0.013 4.3E-07 48.3 11.3 88 68-168 4-125 (125)
38 2x11_B Ephrin-A5; receptor-sig 96.8 0.0031 1E-07 54.9 7.7 78 93-173 52-166 (177)
39 2vsm_B Ephrin-B2; developmenta 96.0 0.0048 1.6E-07 51.7 3.8 75 94-168 24-138 (140)
40 3czu_B Ephrin-A1; ATP-binding, 96.0 0.011 3.9E-07 51.5 6.3 76 93-171 50-162 (182)
41 3d12_B Ephrin-B3; beta propell 95.8 0.0074 2.5E-07 50.7 4.0 75 94-168 23-140 (141)
42 1shx_A Ephrin-A5; ephrin signa 95.5 0.022 7.6E-07 47.6 6.1 76 93-171 23-135 (138)
43 3s8f_B Cytochrome C oxidase su 95.1 0.059 2E-06 46.1 7.3 67 91-168 93-167 (168)
44 2dv6_A Nitrite reductase; elec 94.3 0.038 1.3E-06 51.9 4.7 74 91-171 55-134 (447)
45 2wo3_B Ephrin-A2; transferase- 94.2 0.078 2.7E-06 45.2 6.0 76 93-171 32-145 (157)
46 3sbq_A Nitrous-oxide reductase 93.4 0.11 3.7E-06 52.8 6.4 67 92-169 559-637 (638)
47 1fwx_A Nitrous oxide reductase 93.3 0.15 5.2E-06 51.3 7.3 68 92-170 514-593 (595)
48 1oe1_A Dissimilatory copper-co 85.6 1.5 5.3E-05 39.5 6.6 76 93-171 67-154 (336)
49 3hei_B Ephrin-A1; EPH receptor 84.5 0.84 2.9E-05 37.8 3.9 76 93-168 22-131 (132)
50 1mzy_A Copper-containing nitri 83.5 1.2 4E-05 40.3 4.8 76 93-171 66-154 (333)
51 1kbv_A ANIA, major outer membr 82.1 2.2 7.4E-05 38.7 6.0 76 92-170 71-157 (327)
52 3gdc_A Multicopper oxidase; be 78.6 2.4 8E-05 37.8 5.0 77 92-169 196-288 (288)
53 2zoo_A Probable nitrite reduct 77.3 1.5 5E-05 41.1 3.3 77 92-171 61-148 (442)
54 2bw4_A Copper-containing nitri 71.6 3.9 0.00013 36.9 4.6 76 93-171 73-160 (340)
55 3gdc_A Multicopper oxidase; be 70.3 6.4 0.00022 35.0 5.6 78 93-171 68-156 (288)
56 3hb3_B Cytochrome C oxidase su 70.2 31 0.0011 31.7 10.3 66 93-170 191-265 (298)
57 1yel_A AT1G16640; CESG, protei 67.5 2.3 7.8E-05 32.5 1.8 26 88-115 71-96 (104)
58 3iuw_A Activating signal coint 62.1 4.9 0.00017 30.8 2.7 16 93-108 36-52 (83)
59 4i1k_A B3 domain-containing tr 60.1 4.1 0.00014 33.5 2.1 28 88-115 110-137 (146)
60 2dv6_A Nitrite reductase; elec 55.1 14 0.00047 34.4 5.1 74 92-170 196-282 (447)
61 3kw8_A Laccase, putative coppe 51.7 13 0.00045 32.7 4.1 93 78-172 157-268 (276)
62 2zwn_A Two-domain type laccase 51.5 15 0.00051 33.4 4.5 77 92-170 36-127 (339)
63 1oe1_A Dissimilatory copper-co 51.0 13 0.00046 33.3 4.1 35 138-172 286-321 (336)
64 1cyx_A CYOA; electron transpor 50.8 13 0.00046 32.6 3.9 65 92-168 42-115 (205)
65 1mzy_A Copper-containing nitri 49.3 9.1 0.00031 34.4 2.7 34 138-171 286-320 (333)
66 1fft_B Ubiquinol oxidase; elec 49.2 48 0.0016 30.7 7.6 69 92-168 152-225 (315)
67 3cg8_A Laccase; oxidoreductase 48.8 20 0.00068 32.8 5.0 31 142-172 279-309 (343)
68 3l6w_A Hemocyanin 1; cupredoxi 47.6 11 0.00038 37.3 3.2 30 139-168 461-491 (491)
69 2gsm_B Cytochrome C oxidase su 47.5 15 0.00051 33.0 3.8 31 138-170 214-247 (262)
70 1v54_B Cytochrome C oxidase po 44.9 14 0.00049 32.4 3.3 31 138-170 183-216 (227)
71 1v10_A Laccase; multicopper bl 44.6 94 0.0032 29.9 9.2 34 138-171 117-151 (521)
72 3g5w_A Multicopper oxidase typ 43.3 17 0.0006 32.8 3.6 76 93-170 36-126 (318)
73 1aoz_A Ascorbate oxidase; oxid 42.7 38 0.0013 32.8 6.1 77 93-171 36-125 (552)
74 3pxl_A Laccase; 4-copper prote 40.8 1.3E+02 0.0044 29.0 9.5 77 93-171 36-130 (499)
75 3t6v_A Laccase; beta barrel, o 40.8 1.2E+02 0.0043 29.0 9.4 77 93-171 37-131 (495)
76 1sdd_A Coagulation factor V; c 40.0 3.6 0.00012 37.0 -1.5 34 138-171 269-302 (306)
77 2z0b_A GDE5, KIAA1434, putativ 39.7 15 0.0005 29.5 2.3 41 67-107 24-75 (131)
78 2q9o_A Laccase-1; multicopper 39.5 29 0.001 33.8 4.8 77 93-171 69-159 (559)
79 3sqr_A Laccase; multicopper ox 38.5 43 0.0015 33.2 5.8 34 138-171 156-189 (580)
80 2zoo_A Probable nitrite reduct 38.2 39 0.0013 31.3 5.3 35 138-172 265-300 (442)
81 2j5w_A Ceruloplasmin, ferroxid 35.7 21 0.00073 37.7 3.3 76 92-171 633-719 (1065)
82 2xu9_A Laccase; oxidoreductase 34.5 54 0.0018 30.7 5.6 73 93-171 49-137 (439)
83 1zpu_A Iron transport multicop 33.6 46 0.0016 32.3 5.1 77 93-171 36-126 (534)
84 3g5w_A Multicopper oxidase typ 32.9 51 0.0017 29.6 5.0 32 138-169 239-276 (318)
85 1wid_A DNA-binding protein RAV 29.6 18 0.00061 28.9 1.2 21 88-108 85-105 (130)
86 2z0t_A Putative uncharacterize 29.4 17 0.00058 28.9 1.0 11 93-103 32-42 (109)
87 1sdd_A Coagulation factor V; c 28.7 90 0.0031 27.7 5.8 78 93-171 62-168 (306)
88 1hfu_A Laccase 1; oxidoreducta 28.6 1.7E+02 0.0059 27.8 8.1 34 138-171 96-130 (503)
89 2qcp_X Cation efflux system pr 27.8 28 0.00097 25.7 2.0 17 92-108 51-67 (80)
90 1kbv_A ANIA, major outer membr 27.8 33 0.0011 30.9 2.8 34 138-171 275-309 (327)
91 3abg_A Bilirubin oxidase; clea 27.7 1.2E+02 0.004 29.5 6.8 103 67-171 350-477 (534)
92 2vb2_X Copper protein, cation 27.4 29 0.00099 26.2 2.0 21 88-108 55-75 (88)
93 3iot_A Maltose-binding protein 27.4 13 0.00044 34.1 0.0 9 245-253 437-445 (449)
94 2uxt_A Protein SUFI, SUFI; oxi 27.3 32 0.0011 32.5 2.7 72 93-171 52-140 (451)
95 3tas_A Small laccase, multi-co 26.0 1.1E+02 0.0038 27.2 5.9 78 94-172 45-149 (313)
96 2bw4_A Copper-containing nitri 25.7 60 0.0021 29.0 4.1 34 138-171 292-326 (340)
97 1ac0_A Glucoamylase; hydrolase 25.5 14 0.00047 28.2 -0.1 40 67-106 22-72 (108)
98 3kw8_A Laccase, putative coppe 25.3 74 0.0025 27.8 4.6 76 93-171 38-142 (276)
99 4he6_A Peptidase family U32; u 25.2 39 0.0013 24.9 2.3 18 91-108 26-43 (89)
100 2kbn_A Conserved protein; nucl 24.8 46 0.0016 25.5 2.7 31 68-104 38-70 (109)
101 3aw5_A Multicopper oxidase; be 23.6 32 0.0011 32.5 2.0 72 93-171 40-128 (448)
102 2l55_A SILB,silver efflux prot 23.4 40 0.0014 25.1 2.1 21 89-109 42-62 (82)
103 2k75_A Uncharacterized protein 22.0 33 0.0011 26.3 1.4 29 68-104 41-69 (106)
104 1xne_A Hypothetical protein PF 21.9 23 0.00078 28.2 0.5 12 93-104 33-44 (113)
105 2r7e_A Coagulation factor VIII 21.3 91 0.0031 31.7 4.8 76 92-171 245-331 (742)
106 2r7e_B Coagulation factor VIII 20.5 12 0.0004 38.5 -1.9 73 92-168 369-455 (770)
107 2r7e_B Coagulation factor VIII 20.3 62 0.0021 33.2 3.4 76 93-171 201-299 (770)
108 1sdd_B Coagulation factor V; c 20.2 47 0.0016 32.7 2.4 32 138-169 296-327 (647)
No 1
>1jer_A Cucumber stellacyanin; electron transport, copper, glycoprotein, hydroxylation; 1.60A {Cucumis sativus} SCOP: b.6.1.1
Probab=100.00 E-value=1.2e-41 Score=285.74 Aligned_cols=107 Identities=28% Similarity=0.512 Sum_probs=101.0
Q ss_pred cceEEEEcCCCCccccCCC-CCchhhccCCeEEeCCEEEEEeeCCCCeEEEE-cccCCCccCCCCCCcccCCCCeEEEe-
Q 047972 65 EAYKFNVGGKNGLWVVKPY-ENYNHWAERMRFQVNDSLYFKYKKGSDSVLVV-TKDDYFSCNNKKPVQSLTDGESVFSF- 141 (273)
Q Consensus 65 ~A~~y~VGg~~G~W~~~P~-~~Yt~WAs~ktF~VGDtLvF~y~~~~HsVvqV-tk~dYd~C~~s~pi~~~ssG~t~V~L- 141 (273)
+|++|+|||++| |+++++ .+|++||++|+|+|||+|+|+|++++|+|+|| +|++|+.|+.++++..+++|+++|+|
T Consensus 2 ~a~~~~VGg~~G-W~~~~~~~~Y~~Wa~~~~F~vGD~LvF~y~~~~HsV~~V~~~~~y~~C~~s~p~~~~~~G~~~v~L~ 80 (138)
T 1jer_A 2 QSTVHIVGDNTG-WSVPSSPNFYSQWAAGKTFRVGDSLQFNFPANAHNVHEMETKQSFDACNFVNSDNDVERTSPVIERL 80 (138)
T ss_dssp CCCEEETTGGGC-SSCCSSTTHHHHHHHTCCEETTCEEEECCCTTTCCCEEESCHHHHHHTCCTTSCCCCCCCSCEEEEC
T ss_pred CceEEEECCcCc-CcCCCCccchhhhhcCCcCcCCCEEEEeecCCCceEEEeCchhhcCccCCCCccccccCCCeEEEec
Confidence 578999999999 998754 68999999999999999999999999999999 99999999999999999999999999
Q ss_pred cCcccEEEEeCCCCCCCCCCeEEEEEeecCC
Q 047972 142 DHSGPYFFISGNADNCNKGQKLIVVVMAVRN 172 (273)
Q Consensus 142 ~~pG~~YFICgv~gHC~~GMKlaI~V~a~~~ 172 (273)
+++|++||||++++||++||||+|+|.+.+.
T Consensus 81 ~~~G~~YFicg~~gHC~~GmKl~I~V~~~~~ 111 (138)
T 1jer_A 81 DELGMHYFVCTVGTHCSNGQKLSINVVAANA 111 (138)
T ss_dssp CSSEEEEEECCSTTTGGGTCEEEEEEECCC-
T ss_pred cCCcCEEEEcCCCCccccCCEEEEEEcCCCC
Confidence 9999999999999999999999999997653
No 2
>1ws8_A Mavicyanin; oxidized form, phytocyanin, cupredoxin, electron transport; 1.60A {Cucurbita pepo} SCOP: b.6.1.1 PDB: 1ws7_A
Probab=100.00 E-value=1.3e-39 Score=263.09 Aligned_cols=106 Identities=31% Similarity=0.614 Sum_probs=99.8
Q ss_pred cceEEEEcCCCCccccCCCCCchhhccCCeEEeCCEEEEEeeCCCCeEEEEcccCCCccCCCCCCcccCCCCeEEEecCc
Q 047972 65 EAYKFNVGGKNGLWVVKPYENYNHWAERMRFQVNDSLYFKYKKGSDSVLVVTKDDYFSCNNKKPVQSLTDGESVFSFDHS 144 (273)
Q Consensus 65 ~A~~y~VGg~~G~W~~~P~~~Yt~WAs~ktF~VGDtLvF~y~~~~HsVvqVtk~dYd~C~~s~pi~~~ssG~t~V~L~~p 144 (273)
+|++|+|||++| |++++..+|++||++++|+|||+|+|+|.++.|+|+||++++|+.|+.++++..+++|+++|+|+++
T Consensus 1 ~a~~~~VG~~~G-W~~~~~~~Y~~Wa~~~~F~vGD~LvF~y~~~~hsV~~V~~~~y~~C~~~~p~~~~~~G~~~v~L~~~ 79 (109)
T 1ws8_A 1 MATVHKVGDSTG-WTTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSSSPAASYTSGADSIPLKRP 79 (109)
T ss_dssp CCCEEETTGGGC-SCSSSCCCHHHHHHTSCBCTTCEEEEECCTTTCCEEEECHHHHHHTCCSSCSEEECSSEEEEECCSS
T ss_pred CCcEEEeCCCCC-ccCCCCcChhHhhcCCcCcCCCEEEEeecCCCceEEEEChHHCCcccCCCcccccCCCCEEEEECCC
Confidence 478999999999 9987667999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccEEEEeCCCCCCCCCCeEEEEEeecC
Q 047972 145 GPYFFISGNADNCNKGQKLIVVVMAVR 171 (273)
Q Consensus 145 G~~YFICgv~gHC~~GMKlaI~V~a~~ 171 (273)
|++||||++++||++||||+|+|.+..
T Consensus 80 G~~yFic~~~gHC~~GmKl~I~V~~~~ 106 (109)
T 1ws8_A 80 GTFYFLCGIPGHCQLGQKVEIKVDPGS 106 (109)
T ss_dssp EEEEEECCSTTTTTTTCEEEEEECC--
T ss_pred cCEEEECCCCCcccCCCEEEEEEcCCC
Confidence 999999999999999999999998654
No 3
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A
Probab=100.00 E-value=6.6e-38 Score=255.83 Aligned_cols=105 Identities=32% Similarity=0.601 Sum_probs=96.8
Q ss_pred eEEEEcCCCCccccC-CCCCchhhccCCeEEeCCEEEEEeeCCCCeEEEEcccCCCccCCCCCCcccCCCCeEEEecCcc
Q 047972 67 YKFNVGGKNGLWVVK-PYENYNHWAERMRFQVNDSLYFKYKKGSDSVLVVTKDDYFSCNNKKPVQSLTDGESVFSFDHSG 145 (273)
Q Consensus 67 ~~y~VGg~~G~W~~~-P~~~Yt~WAs~ktF~VGDtLvF~y~~~~HsVvqVtk~dYd~C~~s~pi~~~ssG~t~V~L~~pG 145 (273)
++|+|||++| |+++ ++.+|++|+++++|+|||+|+|+|.+++|+|+||+|++|+.|+..+++..+++|++.|+|+++|
T Consensus 2 ~~~~VG~~~G-W~~~~~~~~Y~~Wa~~~~f~vGD~L~F~y~~~~HsV~~V~~~~y~~C~~~~~~~~~~~G~~~v~l~~~G 80 (116)
T 1x9u_A 2 EDYDVGGDME-WKRPSDPKFYITWATGKTFRVGDELEFDFAAGMHDVAVVTKDAFDNCKKENPISHMTTPPVKIMLNTTG 80 (116)
T ss_dssp CEEETTGGGC-SSCCSSTTHHHHHHTTCCEETTCEEEECCCTTTCCEEEECHHHHHTTCCSSCSEEECSSSEEEECCSCE
T ss_pred eEEEECCcCc-CcCCCCCcchhhccccccCcCCCEEEEEecCCCCeEEEEChhhcCccCCCCCccccCCCCeEEEECCCC
Confidence 5799999999 9975 3478999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEeCCCCCCCCCCeEEE-EEeecCC
Q 047972 146 PYFFISGNADNCNKGQKLIV-VVMAVRN 172 (273)
Q Consensus 146 ~~YFICgv~gHC~~GMKlaI-~V~a~~~ 172 (273)
++||||++++||++||||+| +|.+.+.
T Consensus 81 ~~yFic~~~~HC~~Gmkl~In~V~~~~~ 108 (116)
T 1x9u_A 81 PQYYICTVGDHCRVGQKLSINVVGAGGA 108 (116)
T ss_dssp EEEEECCSTTTTTTTCEEEEEEECC---
T ss_pred CEEEECCCCCccccCCEEEEEEECCCCC
Confidence 99999999999999999999 8876553
No 4
>2cbp_A Cucumber basic protein; electron transport, phytocyanin, type 1 copper protein; 1.80A {Cucumis sativus} SCOP: b.6.1.1
Probab=100.00 E-value=6.9e-37 Score=241.91 Aligned_cols=96 Identities=28% Similarity=0.623 Sum_probs=92.0
Q ss_pred eEEEEcCCCCccccCCCCCchhhccCCeEEeCCEEEEEeeCCCCeEEEEcccCCCccCCCCCCcccCCCCeEEEecCccc
Q 047972 67 YKFNVGGKNGLWVVKPYENYNHWAERMRFQVNDSLYFKYKKGSDSVLVVTKDDYFSCNNKKPVQSLTDGESVFSFDHSGP 146 (273)
Q Consensus 67 ~~y~VGg~~G~W~~~P~~~Yt~WAs~ktF~VGDtLvF~y~~~~HsVvqVtk~dYd~C~~s~pi~~~ssG~t~V~L~~pG~ 146 (273)
++|+|||++| |++ +|++||++++|+|||+|+|+|.+++|+|+||++++|+.|+.++++..+++|++.|+| ++|+
T Consensus 1 ~~~~VG~~~G-W~~----~y~~Wa~~~~f~vGD~L~F~y~~~~hsV~~v~~~~y~~C~~~~~~~~~~~G~~~v~L-~~g~ 74 (96)
T 2cbp_A 1 AVYVVGGSGG-WTF----NTESWPKGKRFRAGDILLFNYNPSMHNVVVVNQGGFSTCNTPAGAKVYTSGRDQIKL-PKGQ 74 (96)
T ss_dssp CEEETTGGGC-SCS----SCTTTTTTCCBCTTCEEEEECCTTTCCEEEECHHHHHHTCCCTTCEEECSSEEEEEC-CSEE
T ss_pred CEEEECCcCC-Ccc----ChhhhccCceEcCCCEEEEEecCCCCEEEEECHHHCCccCCCCCcccccCCCeEEEe-cCCC
Confidence 4799999999 986 599999999999999999999999999999999999999999999999999999999 8999
Q ss_pred EEEEeCCCCCCCCCCeEEEEEe
Q 047972 147 YFFISGNADNCNKGQKLIVVVM 168 (273)
Q Consensus 147 ~YFICgv~gHC~~GMKlaI~V~ 168 (273)
+||||++++||++||||+|+|+
T Consensus 75 ~yFic~~~~HC~~Gmkl~I~Vl 96 (96)
T 2cbp_A 75 SYFICNFPGHCQSGMKIAVNAL 96 (96)
T ss_dssp EEEECCSTTTGGGTCEEEEEEC
T ss_pred EEEEcCCCCccccCCEEEEEEC
Confidence 9999999999999999999985
No 5
>1f56_A Plantacyanin; cupredoxin, copper protein, beta barrel, plant protein; 2.05A {Spinacia oleracea} SCOP: b.6.1.1
Probab=99.98 E-value=4.4e-33 Score=218.40 Aligned_cols=91 Identities=26% Similarity=0.554 Sum_probs=85.9
Q ss_pred eEEEEcCCCCccccCCCCCchhhccCCeEEeCCEEEEEeeCCCCeEEEEcccCCCccCCCCCCcccCCCCeEEEecCccc
Q 047972 67 YKFNVGGKNGLWVVKPYENYNHWAERMRFQVNDSLYFKYKKGSDSVLVVTKDDYFSCNNKKPVQSLTDGESVFSFDHSGP 146 (273)
Q Consensus 67 ~~y~VGg~~G~W~~~P~~~Yt~WAs~ktF~VGDtLvF~y~~~~HsVvqVtk~dYd~C~~s~pi~~~ssG~t~V~L~~pG~ 146 (273)
++|+| | |+.+ ++|+++++|+|||+|+|+|.+++|+|+||++++|+.|+.++++..+++|++.|+|+ +|+
T Consensus 1 ~~y~V----g-W~~~-----~~Wa~~~~f~vGD~L~F~y~~~~hsV~~v~~~~y~~C~~~~~~~~~~~G~~~v~L~-~g~ 69 (91)
T 1f56_A 1 AVYNI----G-WSFN-----VNGARGKSFRAGDVLVFKYIKGQHNVVAVNGRGYASCSAPRGARTYSSGQDRIKLT-RGQ 69 (91)
T ss_dssp CEEEE----E-CSSS-----CBSCTTCCBCTTCEEEEECCBTTBCEEEECHHHHHTTCCCTTCEEECSSEEEEECC-SEE
T ss_pred CEEEE----e-CCCC-----CcCcCCccEeCCCEEEEEccCCCCeEEEECHHHcCCcCCCCCcccccCCCcEEEeC-CCC
Confidence 46899 6 9874 89999999999999999999999999999999999999999999999999999996 899
Q ss_pred EEEEeCCCCCCCCCCeEEEEEe
Q 047972 147 YFFISGNADNCNKGQKLIVVVM 168 (273)
Q Consensus 147 ~YFICgv~gHC~~GMKlaI~V~ 168 (273)
+||||++++||++||||+|+|.
T Consensus 70 ~yFic~~~~HC~~Gmkl~I~v~ 91 (91)
T 1f56_A 70 NYFICSFPGHCGGGMKIAINAK 91 (91)
T ss_dssp EEEECCSTTTTTTTCEEEEEEC
T ss_pred eEEEcCCCCccccCCEEEEEEC
Confidence 9999999999999999999984
No 6
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=99.33 E-value=3.4e-12 Score=103.78 Aligned_cols=97 Identities=15% Similarity=0.219 Sum_probs=66.9
Q ss_pred ccceEEEEcCCCCccccCCCCCchhhccCCeEEeCCEEEEEeeC-----CCCeEEEEccc-CCCcc--------------
Q 047972 64 CEAYKFNVGGKNGLWVVKPYENYNHWAERMRFQVNDSLYFKYKK-----GSDSVLVVTKD-DYFSC-------------- 123 (273)
Q Consensus 64 A~A~~y~VGg~~G~W~~~P~~~Yt~WAs~ktF~VGDtLvF~y~~-----~~HsVvqVtk~-dYd~C-------------- 123 (273)
+..+++.|+-.+|+|.+.|. ..+++.||+|+|+|.+ ..|+++..+.. ++..+
T Consensus 14 ~~~~~v~V~~~~~~~~F~P~--------~i~v~~G~tV~~~~~N~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (140)
T 1qhq_A 14 TPAQTVEVRAAPDALAFAQT--------SLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFV 85 (140)
T ss_dssp CCSEEEEEEBCSSSSSBSCS--------EEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTC
T ss_pred CCCEEEEEEEeCCCceEeCC--------eEEECCCCEEEEEEECCCCCCCceeEEEeccCcchhhhhhhhhhhccccccc
Confidence 34567888764333888764 5689999999999876 47999887421 11110
Q ss_pred ---CCCCC---CcccCCCC---eEEEecCcccEEEEeCCCCCCCCCCeEEEEEe
Q 047972 124 ---NNKKP---VQSLTDGE---SVFSFDHSGPYFFISGNADNCNKGQKLIVVVM 168 (273)
Q Consensus 124 ---~~s~p---i~~~ssG~---t~V~L~~pG~~YFICgv~gHC~~GMKlaI~V~ 168 (273)
+..+. ......|. ..|+++++|+|||+|++.+||+.|||..|+|.
T Consensus 86 ~~~~~~~~~~~t~~l~pG~~~~~~~~~~~~G~y~f~C~~~~H~~~GM~g~i~V~ 139 (140)
T 1qhq_A 86 PPPDTPNALAWTAMLNAGESGSVTFRTPAPGTYLYICTFPGHYLAGMKGTLTVT 139 (140)
T ss_dssp CCTTCTTEEEECCCBCTTEEEEEEEECCSSEEEEEECCSTTTTTTTCEEEEEEE
T ss_pred CccccccccccceeeCCCceeEEEEEeCCCeeEEEEeCCcCHhhcCCEEEEEEc
Confidence 00000 01223343 36788899999999999999999999999996
No 7
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=99.27 E-value=6.3e-12 Score=93.88 Aligned_cols=86 Identities=20% Similarity=0.340 Sum_probs=63.2
Q ss_pred EEEEcCCCCccccCCCCCchhhccCCeEEeCCEEEEEeeC-CCCeEEEEcccCCCccCCCCCCcccCCCC-eEEEecCcc
Q 047972 68 KFNVGGKNGLWVVKPYENYNHWAERMRFQVNDSLYFKYKK-GSDSVLVVTKDDYFSCNNKKPVQSLTDGE-SVFSFDHSG 145 (273)
Q Consensus 68 ~y~VGg~~G~W~~~P~~~Yt~WAs~ktF~VGDtLvF~y~~-~~HsVvqVtk~dYd~C~~s~pi~~~ssG~-t~V~L~~pG 145 (273)
+..||+++|+|.+.|+ ..++++||+|+|++.. ..|+|...+..++. . .......|. ..++++++|
T Consensus 4 ~v~~~~~~~~~~f~P~--------~i~v~~Gd~V~~~n~~~~~H~v~~~~~~~~~-~----~~~~~~~g~~~~~~f~~~G 70 (91)
T 1bxv_A 4 AIKMGADNGMLAFEPS--------TIEIQAGDTVQWVNNKLAPHNVVVEGQPELS-H----KDLAFSPGETFEATFSEPG 70 (91)
T ss_dssp EEEESCTTSCSSEESS--------EEEECTTCEEEEEECSSCCEEEEETTCGGGC-E----EEEECSTTCEEEEECCSCE
T ss_pred EEEEecCCCccEEeCC--------EEEECCCCEEEEEECCCCCcEEEEeCCCccC-c----ccceeCCCCEEEEEeCCCE
Confidence 4567775444887764 5689999999999875 57999875433221 0 011234454 478999999
Q ss_pred cEEEEeCCCCCCCCCCeEEEEEe
Q 047972 146 PYFFISGNADNCNKGQKLIVVVM 168 (273)
Q Consensus 146 ~~YFICgv~gHC~~GMKlaI~V~ 168 (273)
+|+|+|. .||..|||..|+|.
T Consensus 71 ~y~~~C~--~H~~~gM~g~i~V~ 91 (91)
T 1bxv_A 71 TYTYYCE--PHRGAGMVGKIVVQ 91 (91)
T ss_dssp EEEEECT--TTGGGTCEEEEEEC
T ss_pred EEEEEeC--CCccCCCEEEEEEC
Confidence 9999999 89999999999984
No 8
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=99.11 E-value=9.7e-11 Score=89.79 Aligned_cols=92 Identities=14% Similarity=0.190 Sum_probs=64.4
Q ss_pred eEEEEcCCCCccccCCCCCchhhccCCeEEeCCEEEEEeeC-CCCeEEEEcc---cCCCccCCCCCCcccCCCCe-EEEe
Q 047972 67 YKFNVGGKNGLWVVKPYENYNHWAERMRFQVNDSLYFKYKK-GSDSVLVVTK---DDYFSCNNKKPVQSLTDGES-VFSF 141 (273)
Q Consensus 67 ~~y~VGg~~G~W~~~P~~~Yt~WAs~ktF~VGDtLvF~y~~-~~HsVvqVtk---~dYd~C~~s~pi~~~ssG~t-~V~L 141 (273)
.+..+|++++.+.+.|. ..++++||+|+|.+.. ..|+|...+. ++++.+...........|.+ .+++
T Consensus 2 ~~V~m~~~~~~~~F~P~--------~i~v~~GdtV~~~n~~~~~H~v~~~~~~~p~g~~~~~~~~~~~~~~~g~~~~~tf 73 (98)
T 1iuz_A 2 QIVKLGGDDGSLAFVPS--------KISVAAGEAIEFVNNAGFPHNIVFDEDAVPAGVDADAISYDDYLNSKGETVVRKL 73 (98)
T ss_dssp EEEEESCTTSCCSEESS--------EEEECTTCEEEEEECSSCCEEEEECTTSSCTTCCHHHHCEEEEECSTTCEEEEEC
T ss_pred EEEEEecCCCCcEEeCC--------EEEECCCCEEEEEECCCCCEEEEEeCCCCccccccccccccccccCCCCEEEEEc
Confidence 45667766554888764 5689999999999876 4799976532 12332221110113345554 7899
Q ss_pred cCcccEEEEeCCCCCCCCCCeEEEEEe
Q 047972 142 DHSGPYFFISGNADNCNKGQKLIVVVM 168 (273)
Q Consensus 142 ~~pG~~YFICgv~gHC~~GMKlaI~V~ 168 (273)
+++|+|+|+|.. ||+.||+..|.|.
T Consensus 74 ~~~G~y~y~C~~--H~~~gM~G~I~V~ 98 (98)
T 1iuz_A 74 STPGVYGVYCEP--HAGAGMKMTITVQ 98 (98)
T ss_dssp CSCEEEEEECTT--TGGGTCEEEEEEC
T ss_pred CCCEEEEEEchh--hccCCCEEEEEEC
Confidence 999999999995 9999999999984
No 9
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=99.08 E-value=3.7e-10 Score=86.16 Aligned_cols=91 Identities=15% Similarity=0.231 Sum_probs=63.6
Q ss_pred EEEEcCCCCccccCCCCCchhhccCCeEEeCCEEEEEeeCC-CCeEEEEccc---CCCccCCC--CCCcccCCCCe-EEE
Q 047972 68 KFNVGGKNGLWVVKPYENYNHWAERMRFQVNDSLYFKYKKG-SDSVLVVTKD---DYFSCNNK--KPVQSLTDGES-VFS 140 (273)
Q Consensus 68 ~y~VGg~~G~W~~~P~~~Yt~WAs~ktF~VGDtLvF~y~~~-~HsVvqVtk~---dYd~C~~s--~pi~~~ssG~t-~V~ 140 (273)
+..||+++|++.+.|. ..++++||+|+|++..+ .|+|...+.. +.+.+... ........|.+ +++
T Consensus 2 ~v~m~~~~~~~~F~P~--------~i~v~~G~tV~~~n~~~~~H~v~~~~~~~p~~~~~~~~~~~~~~~~~~~G~~~~~t 73 (99)
T 1plc_A 2 DVLLGADDGSLAFVPS--------EFSISPGEKIVFKNNAGFPHNIVFDEDSIPSGVDASKISMSEEDLLNAKGETFEVA 73 (99)
T ss_dssp EEEESCTTCCSCEESS--------EEEECTTCEEEEEECSSCCBCCEECTTSSCTTCCHHHHCCCTTCCBCSTTCEEEEE
T ss_pred EEEEecCCCcceEeCC--------EEEECCCCEEEEEECCCCceEEEEeCCCCcccccccccccccCccccCCCCEEEEE
Confidence 4567876555777664 56899999999988864 7999875421 12222110 00012344544 889
Q ss_pred ecCcccEEEEeCCCCCCCCCCeEEEEEe
Q 047972 141 FDHSGPYFFISGNADNCNKGQKLIVVVM 168 (273)
Q Consensus 141 L~~pG~~YFICgv~gHC~~GMKlaI~V~ 168 (273)
++++|+|+|+|. .||+.||+..|+|.
T Consensus 74 f~~~G~y~~~C~--~H~~~gM~G~i~V~ 99 (99)
T 1plc_A 74 LSNKGEYSFYCS--PHQGAGMVGKVTVN 99 (99)
T ss_dssp CCSCEEEEEECG--GGTTTTCEEEEEEC
T ss_pred ECCCceEEEEcC--CCcccCCEEEEEEC
Confidence 999999999999 89999999999984
No 10
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=99.06 E-value=2.4e-10 Score=95.92 Aligned_cols=76 Identities=13% Similarity=0.236 Sum_probs=59.1
Q ss_pred CCeEEeCCEEEEEeeCC----CCeEEEEc-ccCCCccCCCCCCc-------ccCCCC---e--EEEecCcccEEEEeCCC
Q 047972 92 RMRFQVNDSLYFKYKKG----SDSVLVVT-KDDYFSCNNKKPVQ-------SLTDGE---S--VFSFDHSGPYFFISGNA 154 (273)
Q Consensus 92 ~ktF~VGDtLvF~y~~~----~HsVvqVt-k~dYd~C~~s~pi~-------~~ssG~---t--~V~L~~pG~~YFICgv~ 154 (273)
..++++||+|+|++.+. .|+++.++ .++|+.|.....+. ....|. . +|++ ++|+|||+|+..
T Consensus 62 ~i~V~~GD~V~~~~tN~~~~~~H~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~PG~sgt~t~tft~-~pGtY~y~C~~~ 140 (154)
T 2cal_A 62 TLEIPAGATVDVTFINTNKGFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFGYTDFTWHP-TAGTYYYVCQIP 140 (154)
T ss_dssp EEEECTTCEEEEEEEECCTTCCCCCEEESCCSCCCSSCCCCSEEEEBCCCCCCBTTBEEEEEEEECC-CSEEEEEECCST
T ss_pred EEEEeCCCEEEEEEEcCCCCeeeEEEEeecCcchhccccccccccccccccccCCCCceEEEEEEEE-CCceEEEECCCC
Confidence 45889999999999863 59999985 45788887654321 223343 2 5577 999999999999
Q ss_pred CCCCCCCeEEEEEe
Q 047972 155 DNCNKGQKLIVVVM 168 (273)
Q Consensus 155 gHC~~GMKlaI~V~ 168 (273)
+||+.|||..|.|.
T Consensus 141 gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 141 GMAATGMFGKIVVK 154 (154)
T ss_dssp TTGGGTCEEEEEEC
T ss_pred CHHHCCCEEEEEEC
Confidence 99999999999984
No 11
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=99.02 E-value=3.3e-10 Score=85.93 Aligned_cols=92 Identities=12% Similarity=0.194 Sum_probs=64.0
Q ss_pred eEEEEcCCCCccccCCCCCchhhccCCeEEeCCEEEEEeeCC-CCeEEEEcc---cCCCccCCCCCCcccCCCCe-EEEe
Q 047972 67 YKFNVGGKNGLWVVKPYENYNHWAERMRFQVNDSLYFKYKKG-SDSVLVVTK---DDYFSCNNKKPVQSLTDGES-VFSF 141 (273)
Q Consensus 67 ~~y~VGg~~G~W~~~P~~~Yt~WAs~ktF~VGDtLvF~y~~~-~HsVvqVtk---~dYd~C~~s~pi~~~ssG~t-~V~L 141 (273)
.+..+|+++|++.+.|. ..++++||+|+|++..+ .|+|...+. ++++.+...........|.+ ++++
T Consensus 2 ~~V~m~~~~~~~~F~P~--------~i~v~~G~~V~~~n~~~~~H~~~~~~~~~p~~~~~~~~~~~~~~~~pG~~~~~tf 73 (98)
T 2plt_A 2 ATVKLGADSGALEFVPK--------TLTIKSGETVNFVNNAGFPHNIVFDEDAIPSGVNADAISRDDYLNAPGETYSVKL 73 (98)
T ss_dssp EEEEESCTTCCSSEESS--------EEEECTTCEEEEEECSSCCEEEEECGGGSCTTCCHHHHCEEEEECSTTCEEEEEC
T ss_pred EEEEEecCCCCceEeCC--------EEEECCCCEEEEEECCCCceEEEEeCCCCCCccccccccccceecCCCCEEEEEe
Confidence 45678766554887664 46899999999988764 799976532 12222211100112344554 7899
Q ss_pred cCcccEEEEeCCCCCCCCCCeEEEEEe
Q 047972 142 DHSGPYFFISGNADNCNKGQKLIVVVM 168 (273)
Q Consensus 142 ~~pG~~YFICgv~gHC~~GMKlaI~V~ 168 (273)
+++|+|+|+|. .||+.||+..|+|.
T Consensus 74 ~~~G~y~y~C~--~H~~~gM~G~i~V~ 98 (98)
T 2plt_A 74 TAAGEYGYYCE--PHQGAGMVGKIIVQ 98 (98)
T ss_dssp CSCEEEEEECG--GGGGGTCEEEEEEC
T ss_pred CCCeEEEEEcC--CccccCCeEEEEEC
Confidence 99999999999 79999999999984
No 12
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=99.00 E-value=2.4e-09 Score=86.97 Aligned_cols=95 Identities=12% Similarity=0.241 Sum_probs=65.8
Q ss_pred ccceEEEEcCC-CCccccCCCCCchhhccCCeEEeCCEEEEEeeCC----CCeEEEEccc------------------CC
Q 047972 64 CEAYKFNVGGK-NGLWVVKPYENYNHWAERMRFQVNDSLYFKYKKG----SDSVLVVTKD------------------DY 120 (273)
Q Consensus 64 A~A~~y~VGg~-~G~W~~~P~~~Yt~WAs~ktF~VGDtLvF~y~~~----~HsVvqVtk~------------------dY 120 (273)
++..++.||.. .+ +.+.|. ..++++||+++|+|.+. .|+++..+.. +|
T Consensus 16 ~~~~~V~v~~~~~~-~~F~p~--------~i~v~~G~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~ 86 (139)
T 2aan_A 16 SGPVTIEIGSKGEE-LAFDKT--------ELTVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANY 86 (139)
T ss_dssp -CCEEEEEEBCTTS-SSBSCS--------EEEECTTCEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTT
T ss_pred CcCEEEEEEecCCc-cEEcCC--------eEEECCCCEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhcccccccc
Confidence 34456778532 34 777654 56899999999888754 6999887532 56
Q ss_pred CccCCCCC---CcccCCCCe-EE--EecCcccEEEEeCCCCCCCCCCeEEEEEe
Q 047972 121 FSCNNKKP---VQSLTDGES-VF--SFDHSGPYFFISGNADNCNKGQKLIVVVM 168 (273)
Q Consensus 121 d~C~~s~p---i~~~ssG~t-~V--~L~~pG~~YFICgv~gHC~~GMKlaI~V~ 168 (273)
..|+..+. ...+..|.+ .+ +++++|+|+|+|.+.+||+ ||+..|.|.
T Consensus 87 ~p~~~~~~~~~t~~l~pGet~~v~f~~~~pG~y~f~C~~~~H~~-GM~G~i~V~ 139 (139)
T 2aan_A 87 LPADKSNIIAESPLANGNETVEVTFTAPAAGTYLYICTVPGHYP-LMQGKLVVN 139 (139)
T ss_dssp CCSCCTTEEEECCCBCTTCEEEEEEECCSSEEEEEECCSTTTTT-TSEEEEEEC
T ss_pred cCcccccccccccccCCCCEEEEEEECCCCeEEEEEcCCCChHH-cCEEEEEEC
Confidence 66653321 122344543 44 4458999999999999999 999999984
No 13
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=98.99 E-value=5.1e-10 Score=86.00 Aligned_cols=89 Identities=19% Similarity=0.316 Sum_probs=61.5
Q ss_pred EEEEcCCCCccccCCCCCchhhccCCeEEeCCEEEEEeeC-CCCeEEEEcccCCC-----c--cCCCCCCcccCCCC-eE
Q 047972 68 KFNVGGKNGLWVVKPYENYNHWAERMRFQVNDSLYFKYKK-GSDSVLVVTKDDYF-----S--CNNKKPVQSLTDGE-SV 138 (273)
Q Consensus 68 ~y~VGg~~G~W~~~P~~~Yt~WAs~ktF~VGDtLvF~y~~-~~HsVvqVtk~dYd-----~--C~~s~pi~~~ssG~-t~ 138 (273)
+..||.++++|.+.|. ..++++||+|+|++.. ..|+|...+....+ . +... . .....|. ..
T Consensus 5 ~V~~~~~~~~~~F~P~--------~i~v~~Gd~V~~~n~~~~~H~~~~~~~~~~~~~g~~~~~~~~~-~-~~~~pG~~~~ 74 (106)
T 2gim_A 5 TVKLGSDKGLLVFEPA--------KLTIKPGDTVEFLNNKVPPHNVVFDAALNPAKSADLAKSLSHK-Q-LLMSPGQSTS 74 (106)
T ss_dssp EEEESCTTCCSSEESS--------EEEECTTCEEEEEECSSSCCCBEECSSSSTTCCHHHHHHHCBC-S-CCCSTTCEEE
T ss_pred EEEEEecCCcceEcCC--------EEEECCCCEEEEEECCCCCceEEEeCCCCcccccccchhcccc-c-eeeCCCCEEE
Confidence 5668765333888764 5689999999999775 47999864321110 0 0011 1 1233454 47
Q ss_pred EEe---cCcccEEEEeCCCCCCCCCCeEEEEEe
Q 047972 139 FSF---DHSGPYFFISGNADNCNKGQKLIVVVM 168 (273)
Q Consensus 139 V~L---~~pG~~YFICgv~gHC~~GMKlaI~V~ 168 (273)
+++ +++|.|+|+|. .||+.||+..|+|.
T Consensus 75 ~~f~~~~~~G~y~y~C~--~H~~~GM~G~i~V~ 105 (106)
T 2gim_A 75 TTFPADAPAGEYTFYCE--PHRGAGMVGKITVA 105 (106)
T ss_dssp EECCTTCCSEEEEEECT--TTGGGTCEEEEEEC
T ss_pred EEEecCCCCceEEEEeC--ChhhcCcEEEEEEc
Confidence 888 89999999999 89999999999996
No 14
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.98 E-value=1.1e-09 Score=83.83 Aligned_cols=91 Identities=14% Similarity=0.110 Sum_probs=62.9
Q ss_pred EEEEcCCCCccccCCCCCchhhccCCeEEeCCEEEEEeeC-CCCeEEEEcccCCC----ccCCCCC----CcccCCCC-e
Q 047972 68 KFNVGGKNGLWVVKPYENYNHWAERMRFQVNDSLYFKYKK-GSDSVLVVTKDDYF----SCNNKKP----VQSLTDGE-S 137 (273)
Q Consensus 68 ~y~VGg~~G~W~~~P~~~Yt~WAs~ktF~VGDtLvF~y~~-~~HsVvqVtk~dYd----~C~~s~p----i~~~ssG~-t 137 (273)
+..||++++++.+.|. ..++++||+|+|++.. ..|+|+..+.+.++ .|..... ......|. .
T Consensus 2 ~V~~g~~~~~~~F~P~--------~i~v~~G~tV~~~n~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~ 73 (102)
T 1kdj_A 2 KVEVGDEVGNFKFYPD--------SITVSAGEAVEFTLVGETGHNIVFDIPAGAPGTVASELKAASMDENDLLSEDEPSF 73 (102)
T ss_dssp EEEESCTTCCCCEESS--------EEEECTTCCEEEEECSSSCBCCEECCCTTCCHHHHHHHHHTSCCTTCCBBTTBCEE
T ss_pred EEEEecCCCccEEeCC--------EEEECCCCEEEEEECCCCCeEEEEeCcccccccccchhhcccccccceecCCCCEE
Confidence 4567875444777664 5689999999999775 47999875433321 1111001 11234454 4
Q ss_pred EEEecCcccEEEEeCCCCCCCCCCeEEEEEe
Q 047972 138 VFSFDHSGPYFFISGNADNCNKGQKLIVVVM 168 (273)
Q Consensus 138 ~V~L~~pG~~YFICgv~gHC~~GMKlaI~V~ 168 (273)
.++++++|+|+|+|. .||+.||+..|+|.
T Consensus 74 ~~tf~~~G~y~y~C~--~H~~~gM~G~i~V~ 102 (102)
T 1kdj_A 74 KAKVSTPGTYTFYCT--PHKSANMKGTLTVK 102 (102)
T ss_dssp EECCCSCEEEEEECS--TTGGGTCEEEEEEC
T ss_pred EEEeCCCeEEEEEeC--CCcccCCeEEEEEC
Confidence 788999999999999 99999999999984
No 15
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.97 E-value=1e-09 Score=83.56 Aligned_cols=91 Identities=18% Similarity=0.210 Sum_probs=63.1
Q ss_pred EEEEcCCCCccccCCCCCchhhccCCeEEeCCEEEEEeeCC-CCeEEEEcc---cCCCccCCC--CCCcccCCCCe-EEE
Q 047972 68 KFNVGGKNGLWVVKPYENYNHWAERMRFQVNDSLYFKYKKG-SDSVLVVTK---DDYFSCNNK--KPVQSLTDGES-VFS 140 (273)
Q Consensus 68 ~y~VGg~~G~W~~~P~~~Yt~WAs~ktF~VGDtLvF~y~~~-~HsVvqVtk---~dYd~C~~s--~pi~~~ssG~t-~V~ 140 (273)
++.||+++|++.+.|. ..++++||+|+|++... .|+|...+. +.++.+... ........|.+ +++
T Consensus 2 ~V~~~~~~~~~~F~P~--------~i~v~~G~tV~~~n~~~~~H~~~~~~~~~p~g~~~~~~~~~~~~~~~~~G~~~~~~ 73 (99)
T 1byp_A 2 EVLLGSSDGGLAFVPS--------DLSIASGEKITFKNNAGFPHNDLFDKKEVPAGVDVTKISMPEEDLLNAPGEEYSVT 73 (99)
T ss_dssp EEEESCTTSCCSEESS--------EEEECTTEEEEEEECSSCCBCCEECTTSSCTTCCHHHHSCCTTCCBCSTTCEEEEE
T ss_pred EEEEecCCCcceEeCC--------EEEECCCCEEEEEECCCCcceEEEeCCCCccccccccccccccceeeCCCCEEEEE
Confidence 4567765554777664 46899999999988764 799876542 122222110 00012344544 789
Q ss_pred ecCcccEEEEeCCCCCCCCCCeEEEEEe
Q 047972 141 FDHSGPYFFISGNADNCNKGQKLIVVVM 168 (273)
Q Consensus 141 L~~pG~~YFICgv~gHC~~GMKlaI~V~ 168 (273)
++++|+|+|+|. .||+.||+..|+|.
T Consensus 74 f~~~G~y~~~C~--~H~~~gM~G~i~V~ 99 (99)
T 1byp_A 74 LTEKGTYKFYCA--PHAGAGMVGKVTVN 99 (99)
T ss_dssp ECSCEEEEEECG--GGTTTTCEEEEEEC
T ss_pred eCCCcEEEEEcC--CccccCCEEEEEEC
Confidence 999999999999 89999999999984
No 16
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=98.96 E-value=1.8e-09 Score=87.78 Aligned_cols=83 Identities=24% Similarity=0.266 Sum_probs=60.1
Q ss_pred cCCCCccccCCCCCchhhccCCeEEeCCEEEEEeeCCCCeEEEEcccCCCccCCCCCC-cccCCCCe-EEEecCcccEEE
Q 047972 72 GGKNGLWVVKPYENYNHWAERMRFQVNDSLYFKYKKGSDSVLVVTKDDYFSCNNKKPV-QSLTDGES-VFSFDHSGPYFF 149 (273)
Q Consensus 72 Gg~~G~W~~~P~~~Yt~WAs~ktF~VGDtLvF~y~~~~HsVvqVtk~dYd~C~~s~pi-~~~ssG~t-~V~L~~pG~~YF 149 (273)
|++++ +.+.|. ..++++||+|+|.+....|+|+... .|...+.. .....|.+ +++++++|.|+|
T Consensus 11 g~~g~-~~F~P~--------~i~V~~GdtV~f~n~~~~H~v~~~~-----~~~p~~~~~~~~~pG~t~~~tF~~~G~y~y 76 (123)
T 1pmy_A 11 GPGGM-MVFDPA--------LVRLKPGDSIKFLPTDKGHNVETIK-----GMAPDGADYVKTTVGQEAVVKFDKEGVYGF 76 (123)
T ss_dssp ETTEE-EEEESS--------EEEECTTCEEEEECSSSSCCCEECT-----TSSCTTCCCCBCCTTSCEEEECCSCEEEEE
T ss_pred cCCCC-ceEeCC--------EEEECCCCEEEEEECCCCcEEEEec-----ccCCCCccceecCCCCEEEEEeCCCeEEEE
Confidence 54434 888765 5689999999999988789998742 12211111 01123443 799999999999
Q ss_pred EeCCCCCCCCCCeEEEEEeec
Q 047972 150 ISGNADNCNKGQKLIVVVMAV 170 (273)
Q Consensus 150 ICgv~gHC~~GMKlaI~V~a~ 170 (273)
+|. .||..||+..|+|...
T Consensus 77 ~C~--~H~~~gM~G~I~V~~~ 95 (123)
T 1pmy_A 77 KCA--PHYMMGMVALVVVGDK 95 (123)
T ss_dssp ECS--TTTTTTCEEEEEESSC
T ss_pred EeC--CccccCCEEEEEEcCC
Confidence 999 6999999999999853
No 17
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.93 E-value=4.3e-09 Score=79.75 Aligned_cols=89 Identities=17% Similarity=0.250 Sum_probs=61.9
Q ss_pred EEEEcCCCCccccCCCCCchhhccCCeEEeCCEEEEEeeC-CCCeEEEEcccC---CCccCCCCCCcccCCCC-eEEEec
Q 047972 68 KFNVGGKNGLWVVKPYENYNHWAERMRFQVNDSLYFKYKK-GSDSVLVVTKDD---YFSCNNKKPVQSLTDGE-SVFSFD 142 (273)
Q Consensus 68 ~y~VGg~~G~W~~~P~~~Yt~WAs~ktF~VGDtLvF~y~~-~~HsVvqVtk~d---Yd~C~~s~pi~~~ssG~-t~V~L~ 142 (273)
+..||++++.+.+.|. ..++++||+|+|.+.. ..|++...+... .+.+.... .....|. ..++++
T Consensus 4 ~V~~~~~~~~~~F~P~--------~i~v~~G~~V~~~n~~~~~H~~~~~~~~~~~~~~~~~~~~--~~~~~g~~~~~tf~ 73 (97)
T 1b3i_A 4 QIKMGTDKYAPLYEPK--------ALSISAGDTVEFVMNKVGPHNVIFDKVPAGESAPALSNTK--LAIAPGSFYSVTLG 73 (97)
T ss_dssp EEEEEETTTEEEEESS--------EEEECTTCEEEEEECSSCCCCBEEEECCTTSCHHHHCBCC--CCCSCSCCEEEECC
T ss_pred EEEEeccCCccEEeCC--------EEEECCCCEEEEEECCCCCeEEEEeCCCCccccccccccc--eecCCCCEEEEEeC
Confidence 4567765343777664 5689999999999876 379998764321 11111111 1233343 478999
Q ss_pred CcccEEEEeCCCCCCCCCCeEEEEEe
Q 047972 143 HSGPYFFISGNADNCNKGQKLIVVVM 168 (273)
Q Consensus 143 ~pG~~YFICgv~gHC~~GMKlaI~V~ 168 (273)
++|+|+|+|. +||+.||+..|+|.
T Consensus 74 ~~G~y~y~C~--~H~~~gM~G~i~V~ 97 (97)
T 1b3i_A 74 TPGTYSFYCT--PHRGAGMVGTITVE 97 (97)
T ss_dssp SCSEEEEECS--STTTTTCEEEEEEC
T ss_pred CCeEEEEEcc--ChhhcCCEEEEEEC
Confidence 9999999999 99999999999984
No 18
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=98.93 E-value=2.5e-09 Score=86.89 Aligned_cols=81 Identities=16% Similarity=0.228 Sum_probs=59.4
Q ss_pred cCCCCccccCCCCCchhhccCCeEEeCCEEEEEeeCCCCeEEEEcccCCCccCCCC--CCcccCCCC-eEEEecCcccEE
Q 047972 72 GGKNGLWVVKPYENYNHWAERMRFQVNDSLYFKYKKGSDSVLVVTKDDYFSCNNKK--PVQSLTDGE-SVFSFDHSGPYF 148 (273)
Q Consensus 72 Gg~~G~W~~~P~~~Yt~WAs~ktF~VGDtLvF~y~~~~HsVvqVtk~dYd~C~~s~--pi~~~ssG~-t~V~L~~pG~~Y 148 (273)
|++ |.+.+.|. ..++++||+|+|.+....|+|+... .|...+ ... ...|. .+++++++|.|+
T Consensus 11 g~~-g~~~F~P~--------~i~V~~GdtV~f~~~~~~H~v~~~~-----~~~p~~~~~~~-~~pG~t~~~tF~~~G~y~ 75 (123)
T 1paz_A 11 GAE-GAMVFEPA--------YIKANPGDTVTFIPVDKGHNVESIK-----DMIPEGAEKFK-SKINENYVLTVTQPGAYL 75 (123)
T ss_dssp ETT-EEEEEESS--------EEEECTTCEEEEEESSSSCCCEECT-----TCSCTTCCCCB-CCTTCCEEEECCSCEEEE
T ss_pred cCC-CCceEeCC--------EEEECCCCEEEEEECCCCeEEEEec-----ccCCCCcccee-cCCCCEEEEEeCCCEEEE
Confidence 544 44888765 5689999999999998789997631 122111 111 12243 378999999999
Q ss_pred EEeCCCCCCCCCCeEEEEEee
Q 047972 149 FISGNADNCNKGQKLIVVVMA 169 (273)
Q Consensus 149 FICgv~gHC~~GMKlaI~V~a 169 (273)
|+|. .||..||+..|+|..
T Consensus 76 y~C~--~H~~~gM~G~I~V~~ 94 (123)
T 1paz_A 76 VKCT--PHYAMGMIALIAVGD 94 (123)
T ss_dssp EECT--TTGGGTCEEEEEESS
T ss_pred EEeC--CcccCCCEEEEEEcC
Confidence 9998 699999999999985
No 19
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=98.91 E-value=2.1e-09 Score=87.60 Aligned_cols=82 Identities=18% Similarity=0.158 Sum_probs=60.3
Q ss_pred CCCCccccCCCCCchhhccCCeEEeCCEEEEEeeCCCCeEEEEcccCCCccCCCCCCc-ccCCCC-eEEEecCcccEEEE
Q 047972 73 GKNGLWVVKPYENYNHWAERMRFQVNDSLYFKYKKGSDSVLVVTKDDYFSCNNKKPVQ-SLTDGE-SVFSFDHSGPYFFI 150 (273)
Q Consensus 73 g~~G~W~~~P~~~Yt~WAs~ktF~VGDtLvF~y~~~~HsVvqVtk~dYd~C~~s~pi~-~~ssG~-t~V~L~~pG~~YFI 150 (273)
|++|.+.+.|+ ..++++||+|+|.+....|+|...+. |...+... ....|. .+++++++|.|+|+
T Consensus 11 g~~G~~~F~P~--------~i~V~~GdtV~f~~~~~~H~v~~~~~-----~~P~g~~~f~~~pg~t~s~TF~~pG~y~y~ 77 (123)
T 3erx_A 11 GESGAMVFEPA--------FVRAEPGDVINFVPTDKSHNVEAIKE-----ILPEGVESFKSKINESYTLTVTEPGLYGVK 77 (123)
T ss_dssp ETTEEEEEESS--------EEEECTTEEEEEEESSTTCCCEECTT-----SSCTTCCCCBCCTTCCEEEEECSCEEEEEE
T ss_pred CCCCcEeEeCC--------EEEECCCCEEEEEECCCCceEEEcCC-----cCCCCccceecCCCCEEEEEeCCCeEEEEE
Confidence 34555888765 56899999999999987899976421 22111110 112233 48999999999999
Q ss_pred eCCCCCCCCCCeEEEEEee
Q 047972 151 SGNADNCNKGQKLIVVVMA 169 (273)
Q Consensus 151 Cgv~gHC~~GMKlaI~V~a 169 (273)
|. .||..||+..|+|..
T Consensus 78 C~--~H~~~GM~G~I~V~~ 94 (123)
T 3erx_A 78 CT--PHFGMGMVGLVQVGD 94 (123)
T ss_dssp CG--GGTTTTCEEEEEESS
T ss_pred eC--CCCcCCcEEEEEECC
Confidence 99 899999999999985
No 20
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=98.86 E-value=6.3e-09 Score=85.29 Aligned_cols=84 Identities=17% Similarity=0.171 Sum_probs=62.1
Q ss_pred cCCCC-ccccCCCCCchhhccCCeEEeCCEEEEEeeCCCCeEEEEcccCCCccCCCCCC-cccCCCC-eEEEecCcccEE
Q 047972 72 GGKNG-LWVVKPYENYNHWAERMRFQVNDSLYFKYKKGSDSVLVVTKDDYFSCNNKKPV-QSLTDGE-SVFSFDHSGPYF 148 (273)
Q Consensus 72 Gg~~G-~W~~~P~~~Yt~WAs~ktF~VGDtLvF~y~~~~HsVvqVtk~dYd~C~~s~pi-~~~ssG~-t~V~L~~pG~~Y 148 (273)
+|++| .+.|.|. ..++++||+|+|.++...|+|...+. +...+.. .....|. .+++++++|.|.
T Consensus 10 ~g~~G~~~~F~P~--------~i~V~~GDTV~f~n~~~~Hnv~~~~~-----~~p~g~~~~~~~pg~t~s~TF~~~G~y~ 76 (124)
T 3ef4_A 10 KDDAGNTMVFQPG--------FVKVEAGDTVKFVPTDKSHNAESVRE-----VWPEGVAPVKGGFSKEVVFNAEKEGLYV 76 (124)
T ss_dssp ECTTSCEEEEESS--------EEEECTTCEEEEECSSSSCCCEECTT-----TSCTTSCCCBCCTTCCEEEECCSSEEEE
T ss_pred cCCCCceeEEeCC--------EEEECCCCEEEEEECCCCccEEEeCC-----cCCCCccccccCCCCEEEEEeCCCeEEE
Confidence 44455 4888775 56899999999999988899986421 2222111 1112344 489999999999
Q ss_pred EEeCCCCCCCCCCeEEEEEeec
Q 047972 149 FISGNADNCNKGQKLIVVVMAV 170 (273)
Q Consensus 149 FICgv~gHC~~GMKlaI~V~a~ 170 (273)
|+|. .||..||+..|+|...
T Consensus 77 Y~C~--~H~~~GM~G~I~V~~p 96 (124)
T 3ef4_A 77 LKCA--PHYGMGMVVLVQVGKP 96 (124)
T ss_dssp EECT--TTGGGTCEEEEEESSC
T ss_pred EEcC--CCCcCCCEEEEEECCC
Confidence 9998 8999999999999864
No 21
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=98.82 E-value=5e-09 Score=85.95 Aligned_cols=86 Identities=14% Similarity=0.154 Sum_probs=61.5
Q ss_pred EcCCCCccccCCCCCchhhccCCeEEeCCEEEEEeeCCCCeEEEEcccCCCccCCCCCCc-ccCCCC-eEEEecCcccEE
Q 047972 71 VGGKNGLWVVKPYENYNHWAERMRFQVNDSLYFKYKKGSDSVLVVTKDDYFSCNNKKPVQ-SLTDGE-SVFSFDHSGPYF 148 (273)
Q Consensus 71 VGg~~G~W~~~P~~~Yt~WAs~ktF~VGDtLvF~y~~~~HsVvqVtk~dYd~C~~s~pi~-~~ssG~-t~V~L~~pG~~Y 148 (273)
+|.+.+...+.|. ..++++||+|+|.+....|+|...+. +...+... ...-|. .+++++++|.|+
T Consensus 11 ~g~~g~~~~F~P~--------~i~V~~GDtVtf~n~~~~H~v~~~~~-----~~P~g~~~f~s~pGet~s~TF~~pG~y~ 77 (127)
T 3tu6_A 11 KAADGRVMAFEPA--------VIRAQPGDTVTFVAKDKGHNSALMKG-----GAPEGAETWKGKINEEITVTLSKPGVYM 77 (127)
T ss_dssp ECTTSCEEEEESS--------EEEECTTCEEEEECSSSSCCCEECTT-----CSCTTCCCCBCCTTCCCEEECCSCEEEE
T ss_pred cCCCCcccEEeCC--------EEEECCCCEEEEEECCCCceEEEccC-----cCCCCccceecCCCCEEEEEeCCCeEEE
Confidence 4654413777764 56899999999999987899976432 11111110 111233 489999999999
Q ss_pred EEeCCCCCCCCCCeEEEEEeecC
Q 047972 149 FISGNADNCNKGQKLIVVVMAVR 171 (273)
Q Consensus 149 FICgv~gHC~~GMKlaI~V~a~~ 171 (273)
|+|. .||..||+..|+|....
T Consensus 78 y~C~--~H~~~GM~G~I~V~~~~ 98 (127)
T 3tu6_A 78 YQCA--PHVGMGMIGAIVVGEPA 98 (127)
T ss_dssp EECT--TTGGGTCEEEEEESSCT
T ss_pred EEeC--CCCcCCcEEEEEECcCC
Confidence 9999 79999999999998643
No 22
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.81 E-value=4.1e-09 Score=80.01 Aligned_cols=91 Identities=16% Similarity=0.253 Sum_probs=60.7
Q ss_pred EEEEcCCCCccccCCCCCchhhccCCeEEeCCEEEEEeeC-CCCeEEEEcccC--CCccCCCCCCcccCCCCe-EEEecC
Q 047972 68 KFNVGGKNGLWVVKPYENYNHWAERMRFQVNDSLYFKYKK-GSDSVLVVTKDD--YFSCNNKKPVQSLTDGES-VFSFDH 143 (273)
Q Consensus 68 ~y~VGg~~G~W~~~P~~~Yt~WAs~ktF~VGDtLvF~y~~-~~HsVvqVtk~d--Yd~C~~s~pi~~~ssG~t-~V~L~~ 143 (273)
+..+|++++++.+.|. ..++++||+|+|.+.. ..|+|...+... .+.............|.+ .+++++
T Consensus 4 ~V~~~~~~~~~~F~P~--------~i~v~~G~~V~~~n~~~~~H~~~~~~~~~pg~~~~~~~~~~~~~~pG~~~~~tf~~ 75 (98)
T 1pcs_A 4 TVKMGSDSGALVFEPS--------TVTIKAGEEVKWVNNKLSPHNIVFDADGVPADTAAKLSHKGLLFAAGESFTSTFTE 75 (98)
T ss_dssp EEEESCTTSCSSEESS--------EEEECTTCEEEEEECSSCCEEEEECCSSSCHHHHHHHCEEEEECSTTCEEEEECCS
T ss_pred EEEEecCCCccEEeCC--------EEEECCCCEEEEEECCCCCcEEEEeCCCCCccccccccccccccCCCCEEEEEcCC
Confidence 5667765333777664 4689999999999775 479987643210 000000000112344544 788999
Q ss_pred cccEEEEeCCCCCCCCCCeEEEEEe
Q 047972 144 SGPYFFISGNADNCNKGQKLIVVVM 168 (273)
Q Consensus 144 pG~~YFICgv~gHC~~GMKlaI~V~ 168 (273)
+|+|+|+|. .||..||+..|.|.
T Consensus 76 ~G~y~~~C~--~H~~~gM~G~i~V~ 98 (98)
T 1pcs_A 76 PGTYTYYCE--PHRGAGMVGKVVVE 98 (98)
T ss_dssp CEEEEEECG--GGTTTTCEEEEEEC
T ss_pred CeEEEEEcC--CccccCCeEEEEEC
Confidence 999999999 89999999999984
No 23
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.53 E-value=1.6e-07 Score=76.44 Aligned_cols=76 Identities=11% Similarity=0.100 Sum_probs=51.6
Q ss_pred cccCCCCCchhhccCCeEEeCCEEEEEeeCC-CCeEEEEcccCCCccCCCCCCcccCCCCe-EEEecCcccEEEEeCCCC
Q 047972 78 WVVKPYENYNHWAERMRFQVNDSLYFKYKKG-SDSVLVVTKDDYFSCNNKKPVQSLTDGES-VFSFDHSGPYFFISGNAD 155 (273)
Q Consensus 78 W~~~P~~~Yt~WAs~ktF~VGDtLvF~y~~~-~HsVvqVtk~dYd~C~~s~pi~~~ssG~t-~V~L~~pG~~YFICgv~g 155 (273)
|.+.|. ..++++||+|.|.+... .|+|...+..+ ..=... ...+..|.+ .++++++|+|+|+|..
T Consensus 55 ~~F~P~--------~i~V~~GdtV~~~N~d~~~H~v~~~~~~~-g~~~~~--s~~l~pG~t~~~tF~~~G~y~y~C~~-- 121 (132)
T 3c75_A 55 MKYLTP--------EVTIKAGETVYWVNGEVMPHNVAFKKGIV-GEDAFR--GEMMTKDQAYAITFNEAGSYDYFCTP-- 121 (132)
T ss_dssp TEESSS--------EEEECTTCEEEEEECSSSCBCCEECTTTS-SSSCEE--CCCBCTTEEEEEEECSCEEEEEECSS--
T ss_pred eEEeCC--------EEEECCCCEEEEEECCCCceEEEEeCCCC-Cccccc--ccccCCCCEEEEEcCCCEEEEEEeCC--
Confidence 676654 56899999999997654 69987643221 000000 012334544 7889999999999996
Q ss_pred CCCCCCeEEEEEe
Q 047972 156 NCNKGQKLIVVVM 168 (273)
Q Consensus 156 HC~~GMKlaI~V~ 168 (273)
|. ||+..|.|.
T Consensus 122 H~--gM~G~I~V~ 132 (132)
T 3c75_A 122 HP--FMRGKVIVE 132 (132)
T ss_dssp CT--TCEEEEEEC
T ss_pred Cc--CCEEEEEEC
Confidence 66 999999984
No 24
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.38 E-value=2.7e-07 Score=70.86 Aligned_cols=85 Identities=18% Similarity=0.156 Sum_probs=53.6
Q ss_pred cccceEEEEcCCCCccccCCCCCchhhccCCeEEeCCEEEEEeeCC---CCeEEEEcccCCCccCCCCCCcccCCCCe--
Q 047972 63 SCEAYKFNVGGKNGLWVVKPYENYNHWAERMRFQVNDSLYFKYKKG---SDSVLVVTKDDYFSCNNKKPVQSLTDGES-- 137 (273)
Q Consensus 63 ~A~A~~y~VGg~~G~W~~~P~~~Yt~WAs~ktF~VGDtLvF~y~~~---~HsVvqVtk~dYd~C~~s~pi~~~ssG~t-- 137 (273)
.+.++++.|--.+ +.+.|+ ..++++||++.|.+.+. .|++.. .+...+ .....|.+
T Consensus 10 ~a~~~~v~V~~~~--~~F~P~--------~i~v~~G~tV~~~~~n~d~~~H~~~~-~~~~~~--------~~~~pg~~~~ 70 (100)
T 4hci_A 10 IASAKVIEVELND--DYFNPN--------VITIPINESTTLLLKNKGKSEHTFTI-KKLGID--------VVVESGKEKN 70 (100)
T ss_dssp ----CCEEEEEET--TEEESS--------EEEECTTSCEEEEEEECSSSCEEEEE-GGGTEE--------EEECTTCEEE
T ss_pred CCCCcEEEEEEEC--CEEeCC--------EEEECCCCEEEEEEEcCCCceEEEEE-ecCCcc--------eeecCCccee
Confidence 3445555554333 456554 56899999999988643 366643 211110 12233332
Q ss_pred -EEEecCcccEEEEeCCCCCCCCCCeEEEEEe
Q 047972 138 -VFSFDHSGPYFFISGNADNCNKGQKLIVVVM 168 (273)
Q Consensus 138 -~V~L~~pG~~YFICgv~gHC~~GMKlaI~V~ 168 (273)
.++.+++|+|.|+|. .||..||+..|.|.
T Consensus 71 ~~~t~~~~G~Y~y~C~--~H~~~gM~G~i~Ve 100 (100)
T 4hci_A 71 ITVKPKSAGTYELICR--YHLLKGMEGKVIVK 100 (100)
T ss_dssp EEECCCSCEEEEEECT--TTGGGTCEEEEEEC
T ss_pred EEEecccCceEEEECc--cccCCCCEEEEEEC
Confidence 566789999999997 79999999999984
No 25
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=98.31 E-value=1.5e-06 Score=66.06 Aligned_cols=89 Identities=18% Similarity=0.310 Sum_probs=58.8
Q ss_pred EEEEcCCCCccccCCCCCchhhccCCeEEeCCEEEEEeeC-CCCeEEEEcccCCCccCC-------CCCCcccCCCCe-E
Q 047972 68 KFNVGGKNGLWVVKPYENYNHWAERMRFQVNDSLYFKYKK-GSDSVLVVTKDDYFSCNN-------KKPVQSLTDGES-V 138 (273)
Q Consensus 68 ~y~VGg~~G~W~~~P~~~Yt~WAs~ktF~VGDtLvF~y~~-~~HsVvqVtk~dYd~C~~-------s~pi~~~ssG~t-~ 138 (273)
+..||++++++.+.|. ..++++||+|+|++.. ..|+|..-... ..+.. .........|.+ .
T Consensus 4 ~V~~~~~~~~~~f~p~--------~i~v~~Gd~V~~~N~~~~~H~v~~~~~~--~~~~~g~~~~~~~~~~~~i~pG~~~~ 73 (105)
T 3cvb_A 4 TVKMGADSGLFQFEPA--------NVTVHPGDTVKWVNNKLPPHNILFDDKQ--VPGASKELADKLSHSQLMFSPGESYE 73 (105)
T ss_dssp EEEESCTTCCSCEESS--------EEEECTTEEEEEEECSSCCEEEEECTTS--SGGGCHHHHHHHCEEEEECSTTCEEE
T ss_pred EEEEeecCCccEEeCC--------EEEEcCCCEEEEEECCCCCCeEEEeCCC--CCcccccccccccccccccCCCCeEE
Confidence 4667765333777653 4589999999998764 46888764211 11100 000012234444 6
Q ss_pred EEe---cCcccEEEEeCCCCCCCCCCeEEEEEe
Q 047972 139 FSF---DHSGPYFFISGNADNCNKGQKLIVVVM 168 (273)
Q Consensus 139 V~L---~~pG~~YFICgv~gHC~~GMKlaI~V~ 168 (273)
+++ +++|+|+|.|. .|+..||+..|.|.
T Consensus 74 ~~f~~~~~~G~y~y~C~--~H~~~GM~G~i~V~ 104 (105)
T 3cvb_A 74 ITFSSDFPAGTYTYYCA--PHRGAGMVGKITVE 104 (105)
T ss_dssp EEECTTSCSEEEEEECT--TTGGGTCEEEEEEC
T ss_pred EEEecCCCCeeEEEEeC--CchhcCCEEEEEEc
Confidence 777 79999999999 89999999999986
No 26
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=98.31 E-value=1.7e-06 Score=74.34 Aligned_cols=93 Identities=12% Similarity=0.222 Sum_probs=61.3
Q ss_pred ceEEEEcCCCCccccCCCCCchhhccCCeE-EeCCEEEEEeeC--C------CCeEEEEcccC---------------CC
Q 047972 66 AYKFNVGGKNGLWVVKPYENYNHWAERMRF-QVNDSLYFKYKK--G------SDSVLVVTKDD---------------YF 121 (273)
Q Consensus 66 A~~y~VGg~~G~W~~~P~~~Yt~WAs~ktF-~VGDtLvF~y~~--~------~HsVvqVtk~d---------------Yd 121 (273)
..++.|+.+++ +.|.|. ..++ +.||++.|.+.+ + .|+++..+..+ |.
T Consensus 42 ~~~V~I~~~d~-m~F~P~--------~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~v~~~~m~~~~~~~v 112 (167)
T 3ay2_A 42 NCAATVESNDN-MQFNTK--------DIQVSKACKEFTITLKHTGTQPKASMGHNLVIAKAEDMDGVFKDGVGAADTDYV 112 (167)
T ss_dssp CCEEEEEECTT-SCBSCS--------EEEEETTCSSEEEEEEECSCSCHHHHCBCCEEEEGGGHHHHHHHHGGGGGGTTS
T ss_pred ceEEEEEeCCC-ceEecc--------eEEEecCCCEEEEEEEECCCCccccccceEEeccCcchhhhHHHhhhccccccc
Confidence 34677887777 888764 3466 679987766654 2 39998765432 21
Q ss_pred ccCCCCC---CcccCCCCe-EEEec----CcccEEEEeCCCCCCCCCCeEEEEEe
Q 047972 122 SCNNKKP---VQSLTDGES-VFSFD----HSGPYFFISGNADNCNKGQKLIVVVM 168 (273)
Q Consensus 122 ~C~~s~p---i~~~ssG~t-~V~L~----~pG~~YFICgv~gHC~~GMKlaI~V~ 168 (273)
.=+..+- ......|.+ .|+++ ++|+|+|+|.+++|=+ |||..|+|.
T Consensus 113 ~~~d~~vl~~t~~l~pGet~svtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~ 166 (167)
T 3ay2_A 113 KPDDARVVAHTKLIGGGEESSLTLDPAKLADGDYKFACTFPGHGA-LMNGKVTLV 166 (167)
T ss_dssp CTTCTTEEEECCCBCTTCEEEEEECGGGGTTSCEEEECCSTTGGG-TSEEEEEEE
T ss_pred cccccchhccceeeCCCCEEEEEEecCCCCCcEEEEEcCCCCchh-cCEEEEEEe
Confidence 1011110 112344544 66665 7899999999999988 999999996
No 27
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=98.29 E-value=5.4e-06 Score=67.92 Aligned_cols=91 Identities=7% Similarity=0.172 Sum_probs=60.1
Q ss_pred EEEEcCCCCccccCCCCCchhhccCCeEEeC-CEEEEEeeCC--------CCeEEEEccc----------------CCCc
Q 047972 68 KFNVGGKNGLWVVKPYENYNHWAERMRFQVN-DSLYFKYKKG--------SDSVLVVTKD----------------DYFS 122 (273)
Q Consensus 68 ~y~VGg~~G~W~~~P~~~Yt~WAs~ktF~VG-DtLvF~y~~~--------~HsVvqVtk~----------------dYd~ 122 (273)
++.|+.+++ +.+.|. ..+++.| |.+.|.+.+. .|+++..+.. +|..
T Consensus 4 ~v~i~~~d~-m~F~p~--------~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v~ 74 (129)
T 1cuo_A 4 ETTVTSGDT-MTYSTR--------SISVPASCAEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVT 74 (129)
T ss_dssp EEEEEECSS-SCCSCS--------EEEEETTCSEEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSC
T ss_pred EEEEEeCCC-ceEccC--------eEEEcCCCeEEEEEEEECCCCcccccccceEEecCcchhhhHHHhhhccccccccc
Confidence 556766666 888764 5688999 9777776542 3999877543 2211
Q ss_pred cCCCCC---CcccCCCCe-EEEec-----CcccEEEEeCCCCCCCCCCeEEEEEe
Q 047972 123 CNNKKP---VQSLTDGES-VFSFD-----HSGPYFFISGNADNCNKGQKLIVVVM 168 (273)
Q Consensus 123 C~~s~p---i~~~ssG~t-~V~L~-----~pG~~YFICgv~gHC~~GMKlaI~V~ 168 (273)
=+..+- ......|.+ +++++ ++|+|+|+|.+++|=+ |||..|+|.
T Consensus 75 ~~~~~~~~~t~~l~pGet~svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~ 128 (129)
T 1cuo_A 75 PGDKRVIAFTPIIGGGEKTSVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLE 128 (129)
T ss_dssp TTCTTCSEECCCBCTTCEEEEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEE
T ss_pred cccccceeeeeEECCCCEEEEEEeccccCCCceEEEEeCCCCchH-cCEEEEEEe
Confidence 011111 123345544 45554 8999999999999999 999999996
No 28
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=98.19 E-value=3e-06 Score=65.70 Aligned_cols=84 Identities=13% Similarity=0.099 Sum_probs=57.0
Q ss_pred ccceEEEEcCCCCccccCCCCCchhhccCCeEEeCCEEEEEeeCC-CCeEEEEcccC----CCccCCCCCCcccCCCCe-
Q 047972 64 CEAYKFNVGGKNGLWVVKPYENYNHWAERMRFQVNDSLYFKYKKG-SDSVLVVTKDD----YFSCNNKKPVQSLTDGES- 137 (273)
Q Consensus 64 A~A~~y~VGg~~G~W~~~P~~~Yt~WAs~ktF~VGDtLvF~y~~~-~HsVvqVtk~d----Yd~C~~s~pi~~~ssG~t- 137 (273)
+.+.+|.|.- ++ |.+.|. ..++++||+|+|++... .|+|...+..+ ++. ..+..|.+
T Consensus 16 ~~a~~~~V~~-~~-~~F~P~--------~i~v~~Gd~V~~~N~d~~~H~v~~~~~~~g~~~~~~-------~~~~pG~~~ 78 (105)
T 2ov0_A 16 VADGAIVVDI-AK-MKYETP--------ELHVKVGDTVTWINREAMPHNVHFVAGVLGEAALKG-------PMMKKEQAY 78 (105)
T ss_dssp CCTTCEEEEE-ET-TEESSS--------EEEECTTCEEEEEECSSSCBCCEECTTTSSSSCEEC-------CCBCTTEEE
T ss_pred CCCcCEEEEE-ee-cEEcCC--------EEEECCCCEEEEEECCCCCEEEEEcCCCCCcccccc-------cccCCCCEE
Confidence 3455565543 34 777664 56899999999987754 69987643211 111 11334544
Q ss_pred EEEecCcccEEEEeCCCCCCCCCCeEEEEEe
Q 047972 138 VFSFDHSGPYFFISGNADNCNKGQKLIVVVM 168 (273)
Q Consensus 138 ~V~L~~pG~~YFICgv~gHC~~GMKlaI~V~ 168 (273)
.++++++|+|+|+|.. |. ||+..|.|.
T Consensus 79 ~~tf~~~G~y~y~C~~--H~--gM~G~i~V~ 105 (105)
T 2ov0_A 79 SLTFTEAGTYDYHCTP--HP--FMRGKVVVE 105 (105)
T ss_dssp EEEECSCEEEEEECSS--CT--TCEEEEEEC
T ss_pred EEEeCCCEEEEEEeCC--CC--CCEEEEEEC
Confidence 7889999999999997 54 999999884
No 29
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=98.19 E-value=2.2e-06 Score=69.33 Aligned_cols=80 Identities=16% Similarity=0.119 Sum_probs=56.1
Q ss_pred cCCCCccccCCCCCchhhccCCeEEeCCEEEEEeeCCCCeEEEEcccCCCccCCCCCCc-ccCCCC-eEEEecCcccEEE
Q 047972 72 GGKNGLWVVKPYENYNHWAERMRFQVNDSLYFKYKKGSDSVLVVTKDDYFSCNNKKPVQ-SLTDGE-SVFSFDHSGPYFF 149 (273)
Q Consensus 72 Gg~~G~W~~~P~~~Yt~WAs~ktF~VGDtLvF~y~~~~HsVvqVtk~dYd~C~~s~pi~-~~ssG~-t~V~L~~pG~~YF 149 (273)
|++ |.+.+.|. ..++++||+|.|.+....|+|+..+. +-..+... ....|. .+++++++|.|+|
T Consensus 11 g~~-g~~~F~P~--------~i~V~~GdtV~f~n~d~~H~v~~~~~-----~~p~~~~~~~~~~g~t~~~tF~~~G~y~y 76 (122)
T 2ux6_A 11 GKD-GAMVFEPA--------SLKVAPGDTVTFIPTDKGHNVETIKG-----MIPDGAEAFKSKINENYKVTFTAPGVYGV 76 (122)
T ss_dssp ETT-EEEEEESS--------EEEECTTEEEEEEESSSSCCCEECTT-----CSCTTCCCCBCCTTCCEEEEECSCEEEEE
T ss_pred CCC-CCceEeCC--------EEEECCCCEEEEEECCCCcEEEEccc-----ccCCCcceeecCCCCEEEEEeCCCEEEEE
Confidence 544 33777664 46899999999999877899976431 11111110 111233 4889999999999
Q ss_pred EeCCCCCCCCCCeEEEEEee
Q 047972 150 ISGNADNCNKGQKLIVVVMA 169 (273)
Q Consensus 150 ICgv~gHC~~GMKlaI~V~a 169 (273)
+|.. |+. |+..|+|..
T Consensus 77 ~C~~--H~~--M~G~I~V~~ 92 (122)
T 2ux6_A 77 KCTP--HPF--MVGVVQVGD 92 (122)
T ss_dssp EETT--EEE--EEEEEEESS
T ss_pred EeCC--Ccc--CEEEEEEeC
Confidence 9996 877 999999985
No 30
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=98.17 E-value=3.5e-06 Score=65.71 Aligned_cols=87 Identities=13% Similarity=0.096 Sum_probs=56.5
Q ss_pred cceEEEEcCCCCccccCCCCCchhhccCCeEEeCCEEEEEeeCC-CCeEEEEcccCCCccCCCCCCcccCCCCe-EEEec
Q 047972 65 EAYKFNVGGKNGLWVVKPYENYNHWAERMRFQVNDSLYFKYKKG-SDSVLVVTKDDYFSCNNKKPVQSLTDGES-VFSFD 142 (273)
Q Consensus 65 ~A~~y~VGg~~G~W~~~P~~~Yt~WAs~ktF~VGDtLvF~y~~~-~HsVvqVtk~dYd~C~~s~pi~~~ssG~t-~V~L~ 142 (273)
.++++.|.-. + +.+.|. ..++++||+|.|..... .|+|...+... ..-... ...+..|.+ .++++
T Consensus 18 ~~~~~~V~~~-~-~~F~P~--------~i~V~~G~tV~~~N~d~~~H~v~~~~~~~-~~~~~~--s~~l~~g~~~~~tf~ 84 (106)
T 1id2_A 18 PADAVVVGIE-K-MKYLTP--------EVTIKAGETVYWVNGEVMPHNVAFKKGIV-GEDAFR--GEMMTKDQAYAITFN 84 (106)
T ss_dssp CTTCEEEEEE-T-TEESSS--------EEEECTTCEEEEEECSSSCBCCEECTTTS-SSSCEE--CCCBCTTEEEEEEEC
T ss_pred CCccEEEEEE-e-cEEeCC--------EEEECCCCEEEEEECCCCcEEEEEeCCCC-Cccccc--ccccCCCCEEEEEeC
Confidence 3445555432 3 677664 56899999999997654 69987643210 000000 012334544 78899
Q ss_pred CcccEEEEeCCCCCCCCCCeEEEEEe
Q 047972 143 HSGPYFFISGNADNCNKGQKLIVVVM 168 (273)
Q Consensus 143 ~pG~~YFICgv~gHC~~GMKlaI~V~ 168 (273)
++|.|.|+|.. |. ||+..|.|.
T Consensus 85 ~~G~y~~~C~~--H~--~M~G~I~V~ 106 (106)
T 1id2_A 85 EAGSYDYFCTP--HP--FMRGKVIVE 106 (106)
T ss_dssp SCEEEEEECSS--CT--TCEEEEEEC
T ss_pred CCEEEEEEeCC--CC--CCEEEEEEC
Confidence 99999999997 76 999999984
No 31
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=98.05 E-value=2e-05 Score=64.56 Aligned_cols=91 Identities=16% Similarity=0.305 Sum_probs=57.2
Q ss_pred EEEEcCCCCccccCCCCCchhhccCCeE-EeCCEEEEEeeCC--------CCeEEEEccc----------------CCCc
Q 047972 68 KFNVGGKNGLWVVKPYENYNHWAERMRF-QVNDSLYFKYKKG--------SDSVLVVTKD----------------DYFS 122 (273)
Q Consensus 68 ~y~VGg~~G~W~~~P~~~Yt~WAs~ktF-~VGDtLvF~y~~~--------~HsVvqVtk~----------------dYd~ 122 (273)
++.|+.+++ +.+.|. ..++ +.||++.|.|.+. .|+++..+.+ +|..
T Consensus 3 ~v~v~~~d~-m~F~p~--------~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~ 73 (128)
T 2iaa_C 3 DVSIEGNDS-MQFNTK--------SIVVDKTCKEFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVK 73 (128)
T ss_dssp EEEEEECTT-SCBSCS--------EEEECTTCSEEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSC
T ss_pred EEEEEeCCC-ceEecC--------EEEEecCCcEEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhccccccccc
Confidence 455666667 888754 2344 5599777777542 3999876533 2321
Q ss_pred cCCCCC---CcccCCCCe-EEEec----Ccc-cEEEEeCCCCCCCCCCeEEEEEe
Q 047972 123 CNNKKP---VQSLTDGES-VFSFD----HSG-PYFFISGNADNCNKGQKLIVVVM 168 (273)
Q Consensus 123 C~~s~p---i~~~ssG~t-~V~L~----~pG-~~YFICgv~gHC~~GMKlaI~V~ 168 (273)
=+..+- ......|.+ .++++ ++| +|.|+|++++|=+ |||..|+|.
T Consensus 74 ~~~~~~~~~t~~l~pGes~~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 127 (128)
T 2iaa_C 74 AGDERVIAHTSVIGGGETDSVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELG 127 (128)
T ss_dssp TTCTTEEEECCCBCTTCEEEEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEEC
T ss_pred cccchhhccceeeCCCCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEe
Confidence 111110 112345544 55554 678 5999999999999 999999996
No 32
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=97.96 E-value=4.6e-05 Score=62.38 Aligned_cols=92 Identities=13% Similarity=0.222 Sum_probs=56.9
Q ss_pred eEEEEcCCCCccccCCCCCchhhccCCeE-EeCCEEEEEeeCC--------CCeEEEEccc----------------CCC
Q 047972 67 YKFNVGGKNGLWVVKPYENYNHWAERMRF-QVNDSLYFKYKKG--------SDSVLVVTKD----------------DYF 121 (273)
Q Consensus 67 ~~y~VGg~~G~W~~~P~~~Yt~WAs~ktF-~VGDtLvF~y~~~--------~HsVvqVtk~----------------dYd 121 (273)
-++.|+.+++ +.+.|. ..++ +.||++.|.+.+. .|+++..+.+ +|.
T Consensus 3 ~~v~v~~~d~-m~F~p~--------~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~~ 73 (129)
T 2ccw_A 3 CEATVESNDA-MQYNVK--------EIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYV 73 (129)
T ss_dssp SEEEEEECTT-SCBSCS--------EEEECTTCSEEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTS
T ss_pred EEEEEEeCCC-ccEecc--------eEEEecCCCEEEEEEEECCCcccccCcceEEEcCccchhhhHHHhhhhccccccc
Confidence 3566776666 888654 2344 4499777766542 3999876543 232
Q ss_pred ccCCCCC---CcccCCCCe-EEEec----Cccc-EEEEeCCCCCCCCCCeEEEEEe
Q 047972 122 SCNNKKP---VQSLTDGES-VFSFD----HSGP-YFFISGNADNCNKGQKLIVVVM 168 (273)
Q Consensus 122 ~C~~s~p---i~~~ssG~t-~V~L~----~pG~-~YFICgv~gHC~~GMKlaI~V~ 168 (273)
.=+..+- ......|.+ +++++ ++|. |+|+|.+++|=+ |||..|+|.
T Consensus 74 ~~~~~~~~~~t~~l~pGet~svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~ 128 (129)
T 2ccw_A 74 KAGDTRVIAHTKVIGGGESDSVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLG 128 (129)
T ss_dssp CTTCTTEEEECCCBCTTCEEEEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEEC
T ss_pred ccccccceeeeeEECCCCEEEEEEeccccCCCceEEEEeCCCChhH-cCEEEEEEe
Confidence 1111110 112344544 55554 5665 999999999988 999999995
No 33
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=97.94 E-value=2.6e-05 Score=63.85 Aligned_cols=92 Identities=14% Similarity=0.262 Sum_probs=58.4
Q ss_pred eEEEEcCCCCccccCCCCCchhhccCCeE-EeCCEEEEEeeCC--------CCeEEEEcccC----------------CC
Q 047972 67 YKFNVGGKNGLWVVKPYENYNHWAERMRF-QVNDSLYFKYKKG--------SDSVLVVTKDD----------------YF 121 (273)
Q Consensus 67 ~~y~VGg~~G~W~~~P~~~Yt~WAs~ktF-~VGDtLvF~y~~~--------~HsVvqVtk~d----------------Yd 121 (273)
-++.|+.+++ +.+.|. ..++ +.||++.|.+.+. .|+++..+.++ |.
T Consensus 3 ~~v~v~~~d~-m~F~p~--------~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~ 73 (128)
T 1nwp_A 3 CKVTVDSTDQ-MSFNTK--------DIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYL 73 (128)
T ss_dssp CEEEEEECTT-SCBSCS--------EEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTS
T ss_pred EEEEEEeCCC-ccEecC--------EEEEecCCCEEEEEEEECCCCcccCCCceEEEccccchhhHHHHHhhcccccccc
Confidence 3566776667 888764 3466 6799877777642 39998765332 21
Q ss_pred ccCCCCC---CcccCCCCe-EEEec----Cccc-EEEEeCCCCCCCCCCeEEEEEe
Q 047972 122 SCNNKKP---VQSLTDGES-VFSFD----HSGP-YFFISGNADNCNKGQKLIVVVM 168 (273)
Q Consensus 122 ~C~~s~p---i~~~ssG~t-~V~L~----~pG~-~YFICgv~gHC~~GMKlaI~V~ 168 (273)
.=+..+- ......|.+ .++++ ++|. |.|+|++++|=+ |||..|+|.
T Consensus 74 ~~~~~~~~~~t~~l~pGet~svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 128 (128)
T 1nwp_A 74 KDGDARVIAHTKVIGAGEKDSVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTLK 128 (128)
T ss_dssp CTTCTTEEEECCCBCTTCEEEEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEEC
T ss_pred ccccchhheeeeeeCCCCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEC
Confidence 1010110 113345554 56554 5676 999999999999 999999984
No 34
>1iko_P Ephrin-B2; greek KEY, glycosylation, signaling protein; HET: NAG MAN; 1.92A {Mus musculus} SCOP: b.6.1.5
Probab=97.31 E-value=4.8e-05 Score=66.22 Aligned_cols=78 Identities=23% Similarity=0.304 Sum_probs=51.8
Q ss_pred eEEeCCEEEEE---eeC------CCCeEEEEcccCCCccCCCC-CCccc--CC--CCeEEEec-------------Ccc-
Q 047972 94 RFQVNDSLYFK---YKK------GSDSVLVVTKDDYFSCNNKK-PVQSL--TD--GESVFSFD-------------HSG- 145 (273)
Q Consensus 94 tF~VGDtLvF~---y~~------~~HsVvqVtk~dYd~C~~s~-pi~~~--ss--G~t~V~L~-------------~pG- 145 (273)
.+++||.|-+. |+. .++.|+.|++++|+.|+... ....+ +. +...+++. ++|
T Consensus 25 ~v~igD~LdIiCP~~~~~~~~~~E~~~LY~Vs~~~y~~C~~~~~~~~l~~C~~P~~~~kftikFq~fsP~p~GlEF~pg~ 104 (178)
T 1iko_P 25 YPQIGDKLDIICPKVDSKTVGQYEYYKVYMVDKDQADRCTIKKENTPLLNCARPDQDVKFTIKFQEFSPNLWGLEFQKNK 104 (178)
T ss_dssp CCCTTCEEEEECCCCCSSSCSCCCBEEEEEECHHHHHHTBCCTTCCCSEEECCTTSCCEEEEECCSSCSSTTCCCCCTTE
T ss_pred EecCCCEEEEECCCCCCCCCCCceEEEEEEECHHHhhhcccCCCCcEEEEecCCCCCEEEEEEEEecCCCCCcccccCCC
Confidence 34569999875 332 23788999999999998863 22122 22 22334331 356
Q ss_pred cEEEEeCCC-----------CCCCC-CCeEEEEEeecC
Q 047972 146 PYFFISGNA-----------DNCNK-GQKLIVVVMAVR 171 (273)
Q Consensus 146 ~~YFICgv~-----------gHC~~-GMKlaI~V~a~~ 171 (273)
.|||||.-. |+|.. +|||.|.|....
T Consensus 105 ~YY~IstS~G~~~gl~~~~gG~C~t~~Mkl~ikV~~~~ 142 (178)
T 1iko_P 105 DYYIISTSNGSLEGLDNQEGGVCQTRAMKILMKVGQDA 142 (178)
T ss_dssp EEEEECCCCBSGGGTTCCBSHHHHHSCCEEEEEETCC-
T ss_pred ceEEEecCCcccccccccCCCccccceeEEEEEeecCC
Confidence 899999864 78966 999999996543
No 35
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=97.23 E-value=0.00062 Score=52.65 Aligned_cols=66 Identities=14% Similarity=0.184 Sum_probs=44.2
Q ss_pred CCeEEeCCEEEEEeeCC---CCeEEEEcccCCCccCCCCCCcccCCCCe-EEEe--cCcccEEEEeCCCCCCCC-CCeEE
Q 047972 92 RMRFQVNDSLYFKYKKG---SDSVLVVTKDDYFSCNNKKPVQSLTDGES-VFSF--DHSGPYFFISGNADNCNK-GQKLI 164 (273)
Q Consensus 92 ~ktF~VGDtLvF~y~~~---~HsVvqVtk~dYd~C~~s~pi~~~ssG~t-~V~L--~~pG~~YFICgv~gHC~~-GMKla 164 (273)
..+++.||.+.|++.+. .|++.. ...+. ......|.+ .+++ +++|+|+|.|.. ||.. +|+..
T Consensus 39 ~i~v~~G~~V~~~~~n~d~~~H~~~i-~~~~~--------~~~i~pG~~~~~~f~~~~~G~y~~~C~~--~~~~~~M~g~ 107 (112)
T 1iby_A 39 TLVVKKGDAVKVVVENKSPISEGFSI-DAFGV--------QEVIKAGETKTISFTADKAGAFTIWCQL--HPKNIHLPGT 107 (112)
T ss_dssp EEEEETTCEEEEEEEECSSSCEEEEE-GGGTE--------EEEECTTCEEEEEEECCSCEEEEEBCSS--SCTTTBCCEE
T ss_pred EEEEeCCCEEEEEEEECCCCeEEEEE-cCCCc--------eeEeCCCCEEEEEEECCCCEEEEEECCC--CCchHHCEEE
Confidence 46899999999987643 477653 22110 112233443 4444 999999999995 7753 49999
Q ss_pred EEEe
Q 047972 165 VVVM 168 (273)
Q Consensus 165 I~V~ 168 (273)
|.|.
T Consensus 108 i~V~ 111 (112)
T 1iby_A 108 LNVV 111 (112)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9986
No 36
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=97.05 E-value=0.0019 Score=52.96 Aligned_cols=66 Identities=18% Similarity=0.292 Sum_probs=45.3
Q ss_pred CCeEEeCCEEEEEeeCC--CCeEEEEcccCCCccCCCCCCcccCCCC---eEEEecCcccEEEEeCCCCCCC---CCCeE
Q 047972 92 RMRFQVNDSLYFKYKKG--SDSVLVVTKDDYFSCNNKKPVQSLTDGE---SVFSFDHSGPYFFISGNADNCN---KGQKL 163 (273)
Q Consensus 92 ~ktF~VGDtLvF~y~~~--~HsVvqVtk~dYd~C~~s~pi~~~ssG~---t~V~L~~pG~~YFICgv~gHC~---~GMKl 163 (273)
..++.+||.+.|..++. .|++.. ...+.+ ....-|. -.++.+++|.|+|+|.. +|. .+|+.
T Consensus 61 ~l~Vp~G~~V~~~vts~DV~Hsf~i-p~~~~k--------~d~~PG~~~~~~~~~~~~G~y~~~C~e--~CG~~H~~M~g 129 (135)
T 2cua_A 61 PIEVPQGAEIVFKITSPDVIHGFHV-EGTNIN--------VEVLPGEVSTVRYTFKRPGEYRIICNQ--YCGLGHQNMFG 129 (135)
T ss_dssp SEEEETTSEEEEEEEBSSSCEEEEE-TTSSCE--------EEECBTBCEEEEEECCSCEEEEEECCS--CCSTTSTTCEE
T ss_pred EEEEcCCCEEEEEEEeCCccceEEe-cCCCce--------eEeCCCCcEEEEEEcCCCEEEEEECcc--cCCCCcCCCEE
Confidence 56899999999999763 366543 111110 1112242 37889999999999985 454 68999
Q ss_pred EEEEe
Q 047972 164 IVVVM 168 (273)
Q Consensus 164 aI~V~ 168 (273)
.|.|.
T Consensus 130 ~v~V~ 134 (135)
T 2cua_A 130 TIVVK 134 (135)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99986
No 37
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=96.87 E-value=0.013 Score=48.26 Aligned_cols=88 Identities=13% Similarity=0.293 Sum_probs=52.8
Q ss_pred EEEEcCCCCccccCCCCCchhhccCCeEEe-CCEEEEEeeCC--------CCeEEEEccc----------------CCCc
Q 047972 68 KFNVGGKNGLWVVKPYENYNHWAERMRFQV-NDSLYFKYKKG--------SDSVLVVTKD----------------DYFS 122 (273)
Q Consensus 68 ~y~VGg~~G~W~~~P~~~Yt~WAs~ktF~V-GDtLvF~y~~~--------~HsVvqVtk~----------------dYd~ 122 (273)
++.|-.+++ ..|.++ ..++.. |+++.|.+.+. .||++..+.+ +|-.
T Consensus 4 ~v~i~~~d~-M~F~p~--------~i~V~~~Ge~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~ 74 (125)
T 3fsa_A 4 SVDIQGNDQ-MQFNTN--------AITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLK 74 (125)
T ss_dssp EEEEEBCTT-SCBSCS--------EEEECTTCSEEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSC
T ss_pred EEEEEccCC-cEEecC--------EEEEecCCCEEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcChhhccCC
Confidence 345555666 777654 334433 99998877753 3999886422 2321
Q ss_pred cCCCCCC---cccCCCCe-EEEec-----CcccEEEEeCCCCCCCCCCeEEEEEe
Q 047972 123 CNNKKPV---QSLTDGES-VFSFD-----HSGPYFFISGNADNCNKGQKLIVVVM 168 (273)
Q Consensus 123 C~~s~pi---~~~ssG~t-~V~L~-----~pG~~YFICgv~gHC~~GMKlaI~V~ 168 (273)
=+..+-+ ..+..|.+ +++++ ++|+|-|+|+ +|= |||..|+|.
T Consensus 75 ~~d~~via~t~~l~pGes~~vtf~~~~l~~~G~y~f~C~--gH~--~M~G~v~V~ 125 (125)
T 3fsa_A 75 PDDSRVIAHTKLIGSGEKDSVTFDVSKLKEGEQYMFFCA--AHA--AMKGTLTLK 125 (125)
T ss_dssp TTCTTCCEECCCBCTTCEEEEEEEGGGC---CCEEEECS--SST--TCEEEEEEC
T ss_pred CCCccceeccceeCCCcEEEEEEeCcCcCCCccEEEEcC--CCC--CcEEEEEEC
Confidence 1111111 12345654 55555 5699999999 887 999999884
No 38
>2x11_B Ephrin-A5; receptor-signaling protein complex, developmental protein, signaling platform, kinase, transferase, neurogenesis, receptor, cataract; 4.83A {Homo sapiens}
Probab=96.83 E-value=0.0031 Score=54.92 Aligned_cols=78 Identities=27% Similarity=0.415 Sum_probs=50.5
Q ss_pred CeEEeCCEEEEE---eeC-------CCCeEEEEcccCCCccCCCCCC-ccc--C-----CCCeEEEe-------------
Q 047972 93 MRFQVNDSLYFK---YKK-------GSDSVLVVTKDDYFSCNNKKPV-QSL--T-----DGESVFSF------------- 141 (273)
Q Consensus 93 ktF~VGDtLvF~---y~~-------~~HsVvqVtk~dYd~C~~s~pi-~~~--s-----sG~t~V~L------------- 141 (273)
..+++||.|-+. |+. .+..++.|++++|++|+..... ..+ + .|..++++
T Consensus 52 i~V~i~D~LDIiCP~y~~~~~~~~~E~y~LY~Vs~e~y~~C~~~~~~~~~~~C~~P~~p~~~~kftikFQ~FSP~p~G~E 131 (177)
T 2x11_B 52 IDVCINDYLDVFCPHYEDSVPEDKTERYVLYMVNFDGYSACDHTSKGFKRWECNRPHSPNGPLKFSEKFQLFTPFSLGFE 131 (177)
T ss_dssp EEECTTCEEEEECCCCCSSSCSSSCCCEEEEEECHHHHHHTCCTTTEEEEEEECCTTCSSSSCEEEEECCSSCSSTTCCC
T ss_pred EEecCCCEEEEECCCCCCCCCCCCceEEEEEEECHHHhccccCCCCCcEEEEeCCCCCCCCCeEEEEEEEEcCCCCCCcc
Confidence 468889999764 432 2457789999999999875432 112 1 13333332
Q ss_pred cCcc-cEEEEeCCC-----CCCCCCCeEEEEEeecCCC
Q 047972 142 DHSG-PYFFISGNA-----DNCNKGQKLIVVVMAVRNK 173 (273)
Q Consensus 142 ~~pG-~~YFICgv~-----gHC~~GMKlaI~V~a~~~~ 173 (273)
=++| .||||++-. +-| |||.|.|...+..
T Consensus 132 F~pG~~YYyISTS~~~~~g~~C---lrLkV~V~p~~~~ 166 (177)
T 2x11_B 132 FRPGREYFYISSAIPDNGRRSC---LKLKVFVRPTNSC 166 (177)
T ss_dssp CCTTEEEEEEEEESSCCCSSSC---CEEEEEECCTTTC
T ss_pred ccCCCeEEEEecCCCCCCCCcc---eEEEEEEEcCCCC
Confidence 1456 688887532 345 9999999877654
No 39
>2vsm_B Ephrin-B2; developmental protein, henipavirus, neurogenesis, glycoprotein, paramyxovirus, envelope protein, cell surface receptor, hendra, virion; HET: NAG; 1.80A {Homo sapiens} PDB: 2wo2_B* 2i85_A 3gxu_B 2vsk_B 2hle_B 1kgy_E
Probab=96.00 E-value=0.0048 Score=51.73 Aligned_cols=75 Identities=25% Similarity=0.351 Sum_probs=48.2
Q ss_pred eEEeCCEEEEE---eeC------CCCeEEEEcccCCCccCCCC-CCccc--C--CCCeEEEec-------------Ccc-
Q 047972 94 RFQVNDSLYFK---YKK------GSDSVLVVTKDDYFSCNNKK-PVQSL--T--DGESVFSFD-------------HSG- 145 (273)
Q Consensus 94 tF~VGDtLvF~---y~~------~~HsVvqVtk~dYd~C~~s~-pi~~~--s--sG~t~V~L~-------------~pG- 145 (273)
.+++||.|-+- |+. ....++.|++++|+.|+... ....+ + .+...+++. ++|
T Consensus 24 ~v~i~D~ldIiCP~~~~~~~~~~E~~~lY~Vs~~~y~~C~~~~~~~~~~~C~~P~~~~kft~kFq~fsP~~~G~eF~~g~ 103 (140)
T 2vsm_B 24 YPQIGDKLDIICPKVDSKTVGQYEYYKVYMVDKDQADRCTIKKENTPLLNCAKPDQDIKFTIKFQEFSPNLWGLEFQKNK 103 (140)
T ss_dssp CCCTTCEEEEEECCCC---CCCCCBEEEEEECHHHHHHTBCCTTCCCSEEECCTTSCEEEEEESSSCCSCSSCCCCCTTE
T ss_pred EecCCCEEEEECCCCCCCCCCCceEEEEEEECHHHhhhcccCCCCcEEEEecCCCCCEEEEEEEEecCCCCCcccccCCC
Confidence 34679999775 321 13578899999999998863 22222 1 233333332 456
Q ss_pred cEEEEeCCC-----------CCCCC-CCeEEEEEe
Q 047972 146 PYFFISGNA-----------DNCNK-GQKLIVVVM 168 (273)
Q Consensus 146 ~~YFICgv~-----------gHC~~-GMKlaI~V~ 168 (273)
.||||+.-. |-|.. .|||.|.|.
T Consensus 104 ~YY~Ists~g~~~gl~~~~gG~C~t~~mkl~i~V~ 138 (140)
T 2vsm_B 104 DYYIISTSNGSLEGLDNQEGGVCQTRAMKILMKVG 138 (140)
T ss_dssp EEEEECCCCBSGGGTTCCBSHHHHHSCCEEEEEET
T ss_pred ceEEEecCCCCccccccccCCccccceEEEEEEec
Confidence 688888643 47855 899999985
No 40
>3czu_B Ephrin-A1; ATP-binding, kinase, nucleotide-binding, receptor, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG MAN; 2.65A {Homo sapiens} PDB: 3mbw_B*
Probab=95.98 E-value=0.011 Score=51.52 Aligned_cols=76 Identities=24% Similarity=0.411 Sum_probs=47.7
Q ss_pred CeEEeCCEEEEE---eeC--------CCCeEEEEcccCCCccCCCC-CCccc------C-CCCeEEEe------------
Q 047972 93 MRFQVNDSLYFK---YKK--------GSDSVLVVTKDDYFSCNNKK-PVQSL------T-DGESVFSF------------ 141 (273)
Q Consensus 93 ktF~VGDtLvF~---y~~--------~~HsVvqVtk~dYd~C~~s~-pi~~~------s-sG~t~V~L------------ 141 (273)
..+++||.|-+- |+. ....++.|++++|++|+... ....+ . .|..++++
T Consensus 50 i~V~i~D~LDIiCP~y~~~~~~~~~~E~y~LY~Vs~e~y~sC~~~~~~~~~~~C~~P~~~~~p~kftikFQ~FSP~p~Gl 129 (182)
T 3czu_B 50 IHVQLNDYVDIICPHYEDHSVADAAMEQYILYLVEHEEYQLCQPQSKDQVRWQCNRPSAKHGPEKLSEKFQRFTPFTLGK 129 (182)
T ss_dssp EEECTTCEEEEECCCCC--CCCGGGSCCEEEEEECHHHHHHTCCCCGGGEEEEECCTTCTTSCCEEEEECCSCCSCTTSC
T ss_pred EEeccCCEEEEECCCCCCCCCCCCCceEEEEEEECHHHhhhccCCCCCcEEEEeCCCCCCCCCcEEEEEEEEcCCCCCCe
Confidence 477899999764 332 23577899999999998763 22121 1 12233322
Q ss_pred -cCcc-cEEEEeCC----CCCCCCCCeEEEEEeecC
Q 047972 142 -DHSG-PYFFISGN----ADNCNKGQKLIVVVMAVR 171 (273)
Q Consensus 142 -~~pG-~~YFICgv----~gHC~~GMKlaI~V~a~~ 171 (273)
=++| .||||+.- +|.| ||+.|.|....
T Consensus 130 EF~pG~dYY~ISts~~~~gg~C---mrL~v~V~~k~ 162 (182)
T 3czu_B 130 EFKEGHSYYYISKPIHQHEDRC---LRLKVTVSGKI 162 (182)
T ss_dssp CCCTTCEEEEEEEESSSCCCSC---CEEEEEECC--
T ss_pred eEeCCCeEEEEEccCCCCCCcc---eEEEEEEecCC
Confidence 1456 68888852 4556 99999998554
No 41
>3d12_B Ephrin-B3; beta propeller, protein-receptor complex, envelope protein, glycoprotein, hemagglutinin, hydrolase, membrane, signal-AN transmembrane; HET: NAG BMA MAN BGC LXZ NGA GL0 GLC LXB NGZ GXL; 3.00A {Mus musculus}
Probab=95.76 E-value=0.0074 Score=50.67 Aligned_cols=75 Identities=23% Similarity=0.272 Sum_probs=48.5
Q ss_pred eEEeCCEEEEE---eeC---------CCCeEEEEcccCCCccCCC-CCCcccC----CCCeEEEe-------------cC
Q 047972 94 RFQVNDSLYFK---YKK---------GSDSVLVVTKDDYFSCNNK-KPVQSLT----DGESVFSF-------------DH 143 (273)
Q Consensus 94 tF~VGDtLvF~---y~~---------~~HsVvqVtk~dYd~C~~s-~pi~~~s----sG~t~V~L-------------~~ 143 (273)
.+++||.|-+. |+. ....++.|++++|++|+.. .+...+. .+...+++ =+
T Consensus 23 ~V~i~D~ldIiCP~~~~~~~~~~~~~E~~~lY~Vs~~~y~~C~~~~~~~~~~~C~~P~~~~kft~kFq~fsP~p~G~EF~ 102 (141)
T 3d12_B 23 YPQIGDRLDLLCPRARPPGPHSSPSYEFYKLYLVEGAQGRRCEAPPAPNLLLTCDRPDLDLRFTIKFQEYSPNLWGHEFR 102 (141)
T ss_dssp CCCTTCEEEEEECCCSSCCTTCCSSCCCCEEEEECSHHHHTTBCCSSCEEEEECCCSSSCEEEEEESSSCCSCCSCCCCC
T ss_pred EecCCCEEEEECCCCCCCCCCCCCCceEEEEEEECHHHhccccCCCCCeEEEEeCCCCCCeEEEEEEEEcCCCCCceeee
Confidence 56788999765 332 3457889999999999876 2322221 12222222 13
Q ss_pred cc-cEEEEeCCC-----------CCCCC-CCeEEEEEe
Q 047972 144 SG-PYFFISGNA-----------DNCNK-GQKLIVVVM 168 (273)
Q Consensus 144 pG-~~YFICgv~-----------gHC~~-GMKlaI~V~ 168 (273)
+| .||||+.-. |-|.. .|||.|.|.
T Consensus 103 pG~~YY~ISts~G~~~gl~~~~gG~C~t~~Mkl~i~V~ 140 (141)
T 3d12_B 103 SHHDYYIIATSDGTREGLESLQGGVCLTRGMKVLLRVG 140 (141)
T ss_dssp TTCEEEEEECSCSSTTTTTCCBCSHHHHTCCEEEEECC
T ss_pred CCCeEEEEecCCCCcccccccCCCccccceEEEEEEec
Confidence 46 789998643 56855 899999985
No 42
>1shx_A Ephrin-A5; ephrin signaling, hormone-growth factor complex; HET: NAG; 2.10A {Mus musculus} SCOP: b.6.1.5 PDB: 1shw_A* 3mx0_B*
Probab=95.55 E-value=0.022 Score=47.65 Aligned_cols=76 Identities=28% Similarity=0.434 Sum_probs=48.6
Q ss_pred CeEEeCCEEEEE---eeC-------CCCeEEEEcccCCCccCCCCCC-ccc--C-----CCCeEEEe-------------
Q 047972 93 MRFQVNDSLYFK---YKK-------GSDSVLVVTKDDYFSCNNKKPV-QSL--T-----DGESVFSF------------- 141 (273)
Q Consensus 93 ktF~VGDtLvF~---y~~-------~~HsVvqVtk~dYd~C~~s~pi-~~~--s-----sG~t~V~L------------- 141 (273)
..+++||.|-+- |+. ....++.|++++|++|+..... ..+ + .|..++++
T Consensus 23 i~V~i~D~lDIiCP~~~~~~~~~~~E~~~lY~Vs~~~y~~C~~~~~~~~~~~C~~P~~p~~~~kftikFq~fsP~p~G~E 102 (138)
T 1shx_A 23 IDVCINDYLDVFCPHYEDSVPEDKTERYVLYMVNFDGYSACDHTSKGFKRWECNRPHSPNGPLKFSEKFQLFTPFSLGFE 102 (138)
T ss_dssp EEECTTCEEEEECCCCCTTCCSTTCCCEEEEEECHHHHHTTCSSSSEEEEEEECCTTCTTSSCEEEEECCSCCSSTTCCC
T ss_pred EEecCCCEEEEECCCCCCCCCCCCceEEEEEEECHHHhccccCCCCCCEEEEeCCCCCCCCCeEEEEEEEEcCCCCCcee
Confidence 467889999764 432 2457789999999999875422 122 1 13333332
Q ss_pred cCcc-cEEEEeCCC-----CCCCCCCeEEEEEeecC
Q 047972 142 DHSG-PYFFISGNA-----DNCNKGQKLIVVVMAVR 171 (273)
Q Consensus 142 ~~pG-~~YFICgv~-----gHC~~GMKlaI~V~a~~ 171 (273)
=++| .||||++-. +-| |||.|.|....
T Consensus 103 F~pG~~YY~ISts~~~~~g~~C---lrL~V~V~p~~ 135 (138)
T 1shx_A 103 FRPGREYFYISSAIPDNGRRSC---LKLKVFVRPTN 135 (138)
T ss_dssp CCTTEEEEEEEEESSCCSCSCC---CEEEEEECCTT
T ss_pred ecCCCeEEEEEcCCCCCCCCce---eEEEEEEEccc
Confidence 1356 688887532 346 99999998644
No 43
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=95.05 E-value=0.059 Score=46.07 Aligned_cols=67 Identities=18% Similarity=0.258 Sum_probs=43.3
Q ss_pred cCCeEEeCCEEEEEeeCC--CCeEEEEcccCCCccCCCCCCcccCCCC---eEEEecCcccEEEEeCCCCCCC---CCCe
Q 047972 91 ERMRFQVNDSLYFKYKKG--SDSVLVVTKDDYFSCNNKKPVQSLTDGE---SVFSFDHSGPYFFISGNADNCN---KGQK 162 (273)
Q Consensus 91 s~ktF~VGDtLvF~y~~~--~HsVvqVtk~dYd~C~~s~pi~~~ssG~---t~V~L~~pG~~YFICgv~gHC~---~GMK 162 (273)
++..+.+|+.+.|..++. .|+... . ++. -.....-|. ..++.+++|.||++|.. .|. .+|+
T Consensus 93 n~l~VP~G~~Vr~~vTS~DViHsf~I-P--~lg------ik~da~PG~~n~~~~~~~kpG~y~g~Cse--~CG~~Hs~M~ 161 (168)
T 3s8f_B 93 NPIEVPQGAEIVFKITSPDVIHGFHV-E--GTN------INVEVLPGEVSTVRYTFKRPGEYRIICNQ--YCGLGHQNMF 161 (168)
T ss_dssp SSEEEETTSEEEEEEECSSSCEEEEE-T--TSS------CEEEECTTBCEEEEEECCSCEEEEEECCS--CCSTTGGGCE
T ss_pred CEEEEeCCCeEEEEEecCCceEEEEE-C--CCC------eEEEecCCceeEEEEEeCCCEEEEEECCc--CCCCCcCCCE
Confidence 356788899999987753 244433 1 111 000111232 37889999999999994 555 4699
Q ss_pred EEEEEe
Q 047972 163 LIVVVM 168 (273)
Q Consensus 163 laI~V~ 168 (273)
..|.|.
T Consensus 162 g~V~V~ 167 (168)
T 3s8f_B 162 GTIVVK 167 (168)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 999986
No 44
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=94.29 E-value=0.038 Score=51.86 Aligned_cols=74 Identities=12% Similarity=0.122 Sum_probs=51.4
Q ss_pred cCCeEEeCCEEEEEeeCC---CCeEEEEcccCCCccCCCCCCcccCCCCe---EEEecCcccEEEEeCCCCCCCCCCeEE
Q 047972 91 ERMRFQVNDSLYFKYKKG---SDSVLVVTKDDYFSCNNKKPVQSLTDGES---VFSFDHSGPYFFISGNADNCNKGQKLI 164 (273)
Q Consensus 91 s~ktF~VGDtLvF~y~~~---~HsVvqVtk~dYd~C~~s~pi~~~ssG~t---~V~L~~pG~~YFICgv~gHC~~GMKla 164 (273)
...+++.||+|+|++.+. .|++..-.......|. ..-|.+ .|+++++|+|||.|...+|=..||+..
T Consensus 55 p~i~v~~Gd~v~~~~~N~~~~~h~~~~~g~~~~~~~~-------i~pG~~~~~~f~~~~~Gt~~y~~~~~~h~~~Gm~G~ 127 (447)
T 2dv6_A 55 PTLVVHEGETVQVNLVNGEGAQHDVVVDQYAARSAIV-------NGKNASSTFSFVASKVGEFNYYCSIAGHRQAGMEGN 127 (447)
T ss_dssp CCEEEETTCEEEEEEECSSSSCBCCEETTTTEECCCB-------CSTTBEEEEEEECCSCEEEEEECCSTTHHHHTCEEE
T ss_pred CeEEEcCCCEEEEEEEcCCCCceEEEEccCCccccee-------cCCCCeEEEEEEcCCCEEEEEEeCCCChhhCCCEEE
Confidence 346899999999988753 3776432221112232 223433 566789999999999988888899999
Q ss_pred EEEeecC
Q 047972 165 VVVMAVR 171 (273)
Q Consensus 165 I~V~a~~ 171 (273)
|.|....
T Consensus 128 i~V~~~~ 134 (447)
T 2dv6_A 128 IQVLPGN 134 (447)
T ss_dssp EEEESSC
T ss_pred EEEeCCc
Confidence 9998644
No 45
>2wo3_B Ephrin-A2; transferase-signaling protein complex, EFN, EPHA4, KINA ephrin, complex, membrane, cell surface receptor, tyrosine- kinase, glycoprotein; HET: NAG; 2.35A {Homo sapiens}
Probab=94.19 E-value=0.078 Score=45.24 Aligned_cols=76 Identities=24% Similarity=0.401 Sum_probs=46.4
Q ss_pred CeEEeCCEEEEE---eeC--------CCCeEEEEcccCCCccCCCCCC-ccc--C-----CCCeEEEe------------
Q 047972 93 MRFQVNDSLYFK---YKK--------GSDSVLVVTKDDYFSCNNKKPV-QSL--T-----DGESVFSF------------ 141 (273)
Q Consensus 93 ktF~VGDtLvF~---y~~--------~~HsVvqVtk~dYd~C~~s~pi-~~~--s-----sG~t~V~L------------ 141 (273)
..+++||.|-+. |+. .+..++.|++++|++|+..... ..+ + .|...+++
T Consensus 32 i~V~i~D~LDIiCP~y~~~~~~~~~~E~y~LY~Vs~~~y~~C~~~~~~~~~~~C~~P~~p~~~~kftikFQ~fSP~p~G~ 111 (157)
T 2wo3_B 32 VEVSINDYLDIYCPHYGAPLPPAERMEHYVLYMVNGEGHASCDHRQRGFKRWECNRPAAPGGPLKFSEKFQLFTPFSLGF 111 (157)
T ss_dssp EEECTTCEEEEECCCCCSSCCCGGGSCCEEEEEECHHHHHHTCCTTSEEEEEEECCTTCTTSSCEEEEECCSSCSSTTSC
T ss_pred EEeccCCEEEEECCCCCCCCCCCCCceEEEEEEECHHHhccccCCCCCCEEEEeCCCCCCCCCeEEEEEEEECCCCCCCe
Confidence 468889999775 331 2245789999999999876421 112 1 12333322
Q ss_pred -cCcc-cEEEEeCCC-----CCCCCCCeEEEEEeecC
Q 047972 142 -DHSG-PYFFISGNA-----DNCNKGQKLIVVVMAVR 171 (273)
Q Consensus 142 -~~pG-~~YFICgv~-----gHC~~GMKlaI~V~a~~ 171 (273)
=++| .||||+.-. |-| |||.|.|....
T Consensus 112 EF~pG~~YY~ISTS~g~~~gg~C---~rlkV~V~~~~ 145 (157)
T 2wo3_B 112 EFRPGHEYYYISATPPNAVDRPC---LRLKVYVRPTQ 145 (157)
T ss_dssp CCCTTCEEEEEEECTTCSCCTTC---CEEEEEECCCC
T ss_pred eeeCCCeEEEEEecCCCCCCCcc---eeEEEEEEcCC
Confidence 1346 799998642 456 57777776544
No 46
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=93.44 E-value=0.11 Score=52.82 Aligned_cols=67 Identities=13% Similarity=0.118 Sum_probs=45.8
Q ss_pred CCeEEeCCEEEEEeeCC------CCeEEEEcccCCCccCCCCCCcccCCCC---eEEEecCcccEEEEeCCCCCCCCC--
Q 047972 92 RMRFQVNDSLYFKYKKG------SDSVLVVTKDDYFSCNNKKPVQSLTDGE---SVFSFDHSGPYFFISGNADNCNKG-- 160 (273)
Q Consensus 92 ~ktF~VGDtLvF~y~~~------~HsVvqVtk~dYd~C~~s~pi~~~ssG~---t~V~L~~pG~~YFICgv~gHC~~G-- 160 (273)
..++.+||.+.|..++. .|++..-+ +. -.....-|. ..++.+++|.|||+|.. +|..+
T Consensus 559 eI~VP~GdtVrfiLTN~D~veDViHSF~IPs---lG------IK~DaiPGrtnsvtFtadkPGvY~y~CSE--~CGa~Hs 627 (638)
T 3sbq_A 559 EFTVKQGDEVTVTITNIDQIEDVSHGFVVVN---HG------VSMEISPQQTSSITFVADKPGLHWYYCSW--FCHALHM 627 (638)
T ss_dssp EEEEETTCEEEEEEEECCCSTTCCEEEEETT---TT------EEEEECTTCEEEEEEECCSCEEEEEECCS--CCSTTCT
T ss_pred EEEEecCceeEEEEecCCcCCCceeeeEecC---CC------ceeeeCCCCeEEEEEEcCCCEEEEEECCC--cCCCCcc
Confidence 56899999999988762 46665421 11 001122343 26788999999999995 66554
Q ss_pred -CeEEEEEee
Q 047972 161 -QKLIVVVMA 169 (273)
Q Consensus 161 -MKlaI~V~a 169 (273)
|+..|.|..
T Consensus 628 ~M~G~ViVEP 637 (638)
T 3sbq_A 628 EMVGRMMVEP 637 (638)
T ss_dssp TCEEEEEEEC
T ss_pred cceEEEEEec
Confidence 999999974
No 47
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=93.30 E-value=0.15 Score=51.26 Aligned_cols=68 Identities=9% Similarity=0.063 Sum_probs=45.8
Q ss_pred CCeEEeCCEEEEEeeCC------CCeEEEEcccCCCccCCCCCCcccCCCCe---EEEecCcccEEEEeCC---CCCCCC
Q 047972 92 RMRFQVNDSLYFKYKKG------SDSVLVVTKDDYFSCNNKKPVQSLTDGES---VFSFDHSGPYFFISGN---ADNCNK 159 (273)
Q Consensus 92 ~ktF~VGDtLvF~y~~~------~HsVvqVtk~dYd~C~~s~pi~~~ssG~t---~V~L~~pG~~YFICgv---~gHC~~ 159 (273)
..++++||++.|...+. .|++..-+ ... .+ ...-|.+ .++.+++|+|||.|.. ..| .
T Consensus 514 ~I~V~~Gd~V~~~ltN~d~~~Dv~Hgf~ip~-~gv-~~-------~i~PG~t~t~~Fta~~pGtY~yhC~e~Cg~~H--~ 582 (595)
T 1fwx_A 514 SFTVKEGDEVTVIVTNLDEIDDLTHGFTMGN-YGV-AM-------EIGPQMTSSVTFVAANPGVYWYYCQWFCHALH--M 582 (595)
T ss_dssp EEEEETTCEEEEEEEECCCSTTCCEEEEETT-TTE-EE-------EECTTCEEEEEEECCSCEEEEEECCSCCSTTC--T
T ss_pred EEEEECCCEEEEEEEeCCCCCCceeeEEecC-CCc-ce-------eeCCCCeEEEEEECCCCEEEEEECCCCCCCCc--c
Confidence 45789999999998762 46665421 110 01 1223432 6788999999999983 245 4
Q ss_pred CCeEEEEEeec
Q 047972 160 GQKLIVVVMAV 170 (273)
Q Consensus 160 GMKlaI~V~a~ 170 (273)
||+..|.|...
T Consensus 583 gM~G~IiV~p~ 593 (595)
T 1fwx_A 583 EMRGRMLVEPK 593 (595)
T ss_dssp TCEEEEEEECC
T ss_pred CCEEEEEEEcC
Confidence 99999999854
No 48
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=85.58 E-value=1.5 Score=39.52 Aligned_cols=76 Identities=13% Similarity=0.204 Sum_probs=48.5
Q ss_pred CeEEeCCEEEEEeeCC-----CCeEEEEcccCCCccCCCCCCcccCCCCe---EEEecCcccEEEEeCCCC----CCCCC
Q 047972 93 MRFQVNDSLYFKYKKG-----SDSVLVVTKDDYFSCNNKKPVQSLTDGES---VFSFDHSGPYFFISGNAD----NCNKG 160 (273)
Q Consensus 93 ktF~VGDtLvF~y~~~-----~HsVvqVtk~dYd~C~~s~pi~~~ssG~t---~V~L~~pG~~YFICgv~g----HC~~G 160 (273)
.+++.||+|++++.+. .|++..=.....+ ....+.....|.+ .++++++|++||-|...+ |=..|
T Consensus 67 i~v~~Gd~v~v~~~N~~~~~~~h~~~~h~~~~~~---~~~~~~~i~pG~~~~y~f~~~~~Gt~~yH~h~~~~~~~~~~~G 143 (336)
T 1oe1_A 67 LVVHEGDYVQLTLVNPATNAMPHNVDFHGATGAL---GGAKLTNVNPGEQATLRFKADRSGTFVYHCAPEGMVPWHVVSG 143 (336)
T ss_dssp EEEETTCEEEEEEEECTTCCSCBCCEETTSCSGG---GGGGGCCBCTTEEEEEEEECCSCEEEEEECCCTTCHHHHHHTT
T ss_pred EEEcCCCEEEEEEEcCCCCCccccceECCCCCCC---CCcceEEeCCCCEEEEEEECCCCeEEEEecCCCCchhHHHhCC
Confidence 4789999999888763 3665442110000 0111222344544 677789999999999754 44679
Q ss_pred CeEEEEEeecC
Q 047972 161 QKLIVVVMAVR 171 (273)
Q Consensus 161 MKlaI~V~a~~ 171 (273)
|...+.|....
T Consensus 144 l~G~liV~~~~ 154 (336)
T 1oe1_A 144 MSGTLMVLPRD 154 (336)
T ss_dssp CEEEEEEECTT
T ss_pred CeEEEEEecCc
Confidence 99999998543
No 49
>3hei_B Ephrin-A1; EPH receptor tyrosine kinase, cell membrane, disulfi glycoprotein, GPI-anchor, lipoprotein, membrane, ATP-bindin kinase; 2.00A {Homo sapiens} SCOP: b.6.1.0
Probab=84.53 E-value=0.84 Score=37.83 Aligned_cols=76 Identities=21% Similarity=0.357 Sum_probs=45.0
Q ss_pred CeEEeCCEEEEE---eeC--------CCCeEEEEcccCCCccCCCC-CCccc------C-CCCeEEEe------------
Q 047972 93 MRFQVNDSLYFK---YKK--------GSDSVLVVTKDDYFSCNNKK-PVQSL------T-DGESVFSF------------ 141 (273)
Q Consensus 93 ktF~VGDtLvF~---y~~--------~~HsVvqVtk~dYd~C~~s~-pi~~~------s-sG~t~V~L------------ 141 (273)
..+++||.|-+- |+. .+..++.|++++|++|+... +...+ . .|...+++
T Consensus 22 v~V~i~D~LDIiCP~y~~~~~~~~~~E~y~LY~Vs~~~y~~C~~~~~~~~~~~C~~P~~~~~~~kft~kFQ~FSP~p~G~ 101 (132)
T 3hei_B 22 IHVQLNDYVDIICPHYEDHSVADAAMEQYILYLVEHEEYQLCQPQSKDQVRWQCNRPSAKHGPEKLSEKFQRFTPFTLGK 101 (132)
T ss_dssp EEECTTCEEEEECCCCCTTSSCGGGCCCEEEEEECHHHHHHTCCSCGGGEEEEECCTTCTTSCCEEEEECCSCCSCTTSC
T ss_pred EEeCCCCeEEEECCCCCCCCCCCCCccEEEEEEeCHHHhccccCCCCCcEEEEeCCCCCCCCceEEEEEEEEcCCCCCCe
Confidence 467889999763 322 23567899999999999764 22222 1 23333332
Q ss_pred -cCcc-cEEEEeCCCCCCC-CCCeEEEEEe
Q 047972 142 -DHSG-PYFFISGNADNCN-KGQKLIVVVM 168 (273)
Q Consensus 142 -~~pG-~~YFICgv~gHC~-~GMKlaI~V~ 168 (273)
=++| .||||+.-..|=. .=+||.|.|.
T Consensus 102 EF~pG~~YY~ISt~~~~~~~~cl~l~v~v~ 131 (132)
T 3hei_B 102 EFKEGHSYYYISKPIHQHEDRCLRLKVTVK 131 (132)
T ss_dssp CCCTTCEEEEEEEESSCCCCSCCEEEEEEC
T ss_pred eecCCCcEEEEEccCCCCCCcceEEEEEEE
Confidence 1346 6888886322221 1268888774
No 50
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=83.49 E-value=1.2 Score=40.33 Aligned_cols=76 Identities=11% Similarity=0.167 Sum_probs=49.0
Q ss_pred CeEEeCCEEEEEeeCC-----CCeEEEEcccCCCccCCCCCCcccCCCCe---EEEecCcccEEEEeCCCC-----CCCC
Q 047972 93 MRFQVNDSLYFKYKKG-----SDSVLVVTKDDYFSCNNKKPVQSLTDGES---VFSFDHSGPYFFISGNAD-----NCNK 159 (273)
Q Consensus 93 ktF~VGDtLvF~y~~~-----~HsVvqVtk~dYd~C~~s~pi~~~ssG~t---~V~L~~pG~~YFICgv~g-----HC~~ 159 (273)
.+++.||+|++++.+. -|.+..-...+.+.- ..+....-|.+ .|+++++|++||-|-..+ |=..
T Consensus 66 i~~~~Gd~v~v~~~N~~~~~h~Hg~~~~~~~~~~~~---~~~~~i~PG~~~~y~f~~~~~Gt~~yH~h~~~~~~~~~~~~ 142 (333)
T 1mzy_A 66 MIVHEGDYVELTLINPPENTMPHNIDFHAATGALGG---GGLTLINPGEKVVLRFKATRAGAFVYHCAPGGPMIPWHVVS 142 (333)
T ss_dssp EEEETTCEEEEEEEECTTCCSCBCCEETTSCSGGGG---GGGCCBCTTEEEEEEEECCSCEEEEEECCCSTTHHHHHHHT
T ss_pred EEecCCCEEEEEEEECCCCcccccceecCCCCCCCC---CceeEeCCCCEEEEEEECCCCEEEEEeecCCcccchhhhhC
Confidence 4789999999988764 256543211111100 11112344543 677789999999999864 6678
Q ss_pred CCeEEEEEeecC
Q 047972 160 GQKLIVVVMAVR 171 (273)
Q Consensus 160 GMKlaI~V~a~~ 171 (273)
||...+.|....
T Consensus 143 Gl~G~~iV~~~~ 154 (333)
T 1mzy_A 143 GMAGCIMVLPRD 154 (333)
T ss_dssp TCEEEEEEECTT
T ss_pred CCEEEEEEccCc
Confidence 999999997543
No 51
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=82.07 E-value=2.2 Score=38.74 Aligned_cols=76 Identities=13% Similarity=0.173 Sum_probs=46.5
Q ss_pred CCeEEeCCEEEEEeeCC-----CCeEEEEcccCCCccCCCCCCcccCCCCe---EEEecCcccEEEEeCCC---CCCCCC
Q 047972 92 RMRFQVNDSLYFKYKKG-----SDSVLVVTKDDYFSCNNKKPVQSLTDGES---VFSFDHSGPYFFISGNA---DNCNKG 160 (273)
Q Consensus 92 ~ktF~VGDtLvF~y~~~-----~HsVvqVtk~dYd~C~~s~pi~~~ssG~t---~V~L~~pG~~YFICgv~---gHC~~G 160 (273)
..+++.||++++++.+. .|++..=--...|. .. .......|.+ .++.+++|++||-|... .|-..|
T Consensus 71 ~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~~~dG--~~-~~~~i~PG~~~~y~f~~~~~Gt~wyH~h~~~~~~~~~~G 147 (327)
T 1kbv_A 71 MIRVREGDTVEVEFSNNPSSTVPHNVDFHAATGQGG--GA-AATFTAPGRTSTFSFKALQPGLYIYHCAVAPVGMHIANG 147 (327)
T ss_dssp BEEEETTCEEEEEEEECTTCSSCBCCEETTCCSGGG--GT-TTTCBCTTEEEEEEEECCSCEEEEEECCCSSHHHHHHTT
T ss_pred eEEEeCCCEEEEEEEECCCCCCceeeEeCccccCCC--CC-cceeecCCCEEEEEEECCCCeEEEEEeCCCChhhhhhcc
Confidence 35789999999988754 35553200000110 00 0111334543 56778999999999763 355679
Q ss_pred CeEEEEEeec
Q 047972 161 QKLIVVVMAV 170 (273)
Q Consensus 161 MKlaI~V~a~ 170 (273)
|...|.|...
T Consensus 148 l~G~~iV~~~ 157 (327)
T 1kbv_A 148 MYGLILVEPK 157 (327)
T ss_dssp CEEEEEEECT
T ss_pred eEEEEEEecC
Confidence 9999999864
No 52
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=78.61 E-value=2.4 Score=37.82 Aligned_cols=77 Identities=12% Similarity=0.120 Sum_probs=47.5
Q ss_pred CCeEEeCCEEEEEeeCCC-----CeEE------EEcccCCCccC--CCCCCcccCCCC---eEEEecCcccEEEEeCCCC
Q 047972 92 RMRFQVNDSLYFKYKKGS-----DSVL------VVTKDDYFSCN--NKKPVQSLTDGE---SVFSFDHSGPYFFISGNAD 155 (273)
Q Consensus 92 ~ktF~VGDtLvF~y~~~~-----HsVv------qVtk~dYd~C~--~s~pi~~~ssG~---t~V~L~~pG~~YFICgv~g 155 (273)
..+++.||+++|...+.. |.+. +|-+++...-. ..+.+ ....|. -.++.+.+|.|.|.|-+..
T Consensus 196 ~l~v~~Ge~vr~~l~N~g~~~~~H~fHlhG~~f~v~~~g~~~~~~~~~Dtv-~v~pg~~~~v~~~~~~pG~~~~hCH~~~ 274 (288)
T 3gdc_A 196 PVKVKQHELVRIHLINVLEYDPINSFHIHGNFFHYYPTGTMLTPSEYTDTI-SQVQGQRGILELRFPYPGKFMFHAHKTE 274 (288)
T ss_dssp CEEEETTCCEEEEEEECCCSSSEEEEEETTCCEEEEETTCCSSCSEEESEE-EEETTCEEEEEECCCSCEEEEEECSSHH
T ss_pred ccccCCCCEEEEEEEeCCCCCcceeEEEcCCEEEEEcCCCccCCCceeeEE-EeCCCceEEEEEECCCCEEEEEEecChH
Confidence 468999999998887521 4442 22111110000 00001 111232 2556689999999999999
Q ss_pred CCCCCCeEEEEEee
Q 047972 156 NCNKGQKLIVVVMA 169 (273)
Q Consensus 156 HC~~GMKlaI~V~a 169 (273)
|=+.||...++|.+
T Consensus 275 H~~~GM~~~~~V~~ 288 (288)
T 3gdc_A 275 FAELGWMGFFEVSA 288 (288)
T ss_dssp HHTTTCEEEEEEEC
T ss_pred HHhcCCCEEEEEeC
Confidence 99999999999864
No 53
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=77.31 E-value=1.5 Score=41.13 Aligned_cols=77 Identities=12% Similarity=0.130 Sum_probs=46.8
Q ss_pred CCeEEeCCEEEEEeeCC-----CCeEEEEcccCCCccCCCCCCcccCCCCe---EEEecCcccEEEEeC---CCCCCCCC
Q 047972 92 RMRFQVNDSLYFKYKKG-----SDSVLVVTKDDYFSCNNKKPVQSLTDGES---VFSFDHSGPYFFISG---NADNCNKG 160 (273)
Q Consensus 92 ~ktF~VGDtLvF~y~~~-----~HsVvqVtk~dYd~C~~s~pi~~~ssG~t---~V~L~~pG~~YFICg---v~gHC~~G 160 (273)
..+++.||+|++++.+. .|++..=--...|. ........-|.+ .|+.+.+|++||-|- ...|=..|
T Consensus 61 ~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~~~dG---~~~~~~i~pg~~~~y~f~~~~~Gt~~yH~H~~~~~~~~~~G 137 (442)
T 2zoo_A 61 FIRVREGDEIEFNLSNHPSSKMPHNIDLHAVTGPGG---GAESSFTAPGHTSTFNFKALNPGLYIYHCATAPVGMHIANG 137 (442)
T ss_dssp BEEEETTCEEEEEEEECTTCSSCBCCEETTCCSGGG---GGGGCCBCTTCEEEEEEECCSCEEEEEECCCSSHHHHHHTT
T ss_pred cEEEeCCCEEEEEEEECCCCCCCCCEEecCCcCCCC---CCccEEECCCCEEEEEEEcCCCeEEEEecCCCChHHHHhCc
Confidence 34789999999988764 35554210000010 000011233443 677789999999994 34566789
Q ss_pred CeEEEEEeecC
Q 047972 161 QKLIVVVMAVR 171 (273)
Q Consensus 161 MKlaI~V~a~~ 171 (273)
|...+.|....
T Consensus 138 l~G~~iv~~~~ 148 (442)
T 2zoo_A 138 MYGLILVEPKE 148 (442)
T ss_dssp CEEEEEEECTT
T ss_pred cEEEEEEeCCC
Confidence 99999998543
No 54
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=71.63 E-value=3.9 Score=36.88 Aligned_cols=76 Identities=12% Similarity=0.206 Sum_probs=48.2
Q ss_pred CeEEeCCEEEEEeeCC-----CCeEEEEcccCCCccCCCCCCcccCCCCe---EEEecCcccEEEEeCCCC----CCCCC
Q 047972 93 MRFQVNDSLYFKYKKG-----SDSVLVVTKDDYFSCNNKKPVQSLTDGES---VFSFDHSGPYFFISGNAD----NCNKG 160 (273)
Q Consensus 93 ktF~VGDtLvF~y~~~-----~HsVvqVtk~dYd~C~~s~pi~~~ssG~t---~V~L~~pG~~YFICgv~g----HC~~G 160 (273)
.+++.||+|++++.+. .|.+..-.....+ + ..+.....-|.+ .++++++|++||-|...+ |=..|
T Consensus 73 i~v~~Gd~v~v~~~N~~~~~~~hg~~~~~~~~~~--~-~~~~~~i~PG~~~~y~~~~~~~Gt~wyH~h~~~~~~~~~~~G 149 (340)
T 2bw4_A 73 MVVHENDYVELRLINPDTNTLLHNIDFHAATGAL--G-GGALTQVNPGEETTLRFKATKPGVFVYHCAPEGMVPWHVTSG 149 (340)
T ss_dssp EEEETTCEEEEEEEECTTCCSCBCCEETTSCSGG--G-GGGGCCBCTTEEEEEEEECCSCEEEEEECCCTTCHHHHHHTT
T ss_pred EEEcCCCEEEEEEEeCCCCCccCcceeCCcCCCC--C-CccceEeCCCCEEEEEEECCCCeEEEEEcCCCCchhhHHhCc
Confidence 4779999999988864 2555431111000 0 011122344543 677789999999999764 55689
Q ss_pred CeEEEEEeecC
Q 047972 161 QKLIVVVMAVR 171 (273)
Q Consensus 161 MKlaI~V~a~~ 171 (273)
|...+.|....
T Consensus 150 l~G~~iV~~~~ 160 (340)
T 2bw4_A 150 MNGAIMVLPRD 160 (340)
T ss_dssp CEEEEEEECTB
T ss_pred CEEEEEEccCc
Confidence 99999997543
No 55
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=70.25 E-value=6.4 Score=34.97 Aligned_cols=78 Identities=13% Similarity=0.145 Sum_probs=46.5
Q ss_pred CeEEeCCEEEEEeeCC---CCeEEEE--cccCCCccCCCCCCcccCCCCe---EEEecCcccEEEEeCCC---CCCCCCC
Q 047972 93 MRFQVNDSLYFKYKKG---SDSVLVV--TKDDYFSCNNKKPVQSLTDGES---VFSFDHSGPYFFISGNA---DNCNKGQ 161 (273)
Q Consensus 93 ktF~VGDtLvF~y~~~---~HsVvqV--tk~dYd~C~~s~pi~~~ssG~t---~V~L~~pG~~YFICgv~---gHC~~GM 161 (273)
.+++.||+|++++.+. .|++..= .....|.=... ......-|.+ .++.+.+|++||-|-.. .|=..||
T Consensus 68 i~~~~Gd~v~v~~~N~~~~~~~iH~HG~~~~~~DG~p~~-~~~~i~PG~~~~y~f~~~~~Gt~~yH~H~~~~~~~~~~Gl 146 (288)
T 3gdc_A 68 LWAREGDALRIHFTNAGAHPHTIHFHGVHRATMDGTPGI-GAGSIAPGQSFTYEFDATPFGTHLYHCHQSPLAPHIAKGL 146 (288)
T ss_dssp EEEETTCEEEEEEEECSSSCBCCEESSCCCGGGSCCTTS-TTCSBCTTCEEEEEEECCSCEEEEEECCCSSHHHHHHTTC
T ss_pred EEEeCCCEEEEEEEeCCCCcccEEeccccccccCCCCCc-cceeECCCCEEEEEEEcCCCccEEEEecCcchHHHHhCcC
Confidence 4789999999988753 2333220 00111100000 0011223443 67788999999999876 3556899
Q ss_pred eEEEEEeecC
Q 047972 162 KLIVVVMAVR 171 (273)
Q Consensus 162 KlaI~V~a~~ 171 (273)
...+.|....
T Consensus 147 ~G~liV~~~~ 156 (288)
T 3gdc_A 147 YGGFIVEPKE 156 (288)
T ss_dssp EEEEEEECSS
T ss_pred eEEEEEeCCc
Confidence 9999997544
No 56
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=70.19 E-value=31 Score=31.73 Aligned_cols=66 Identities=17% Similarity=0.263 Sum_probs=40.9
Q ss_pred CeEEeCCEEEEEeeCC--CCeEEEEcccCCCccCCCCCCccc-CCCC---eEEEecCcccEEEEeCCCCCCCC---CCeE
Q 047972 93 MRFQVNDSLYFKYKKG--SDSVLVVTKDDYFSCNNKKPVQSL-TDGE---SVFSFDHSGPYFFISGNADNCNK---GQKL 163 (273)
Q Consensus 93 ktF~VGDtLvF~y~~~--~HsVvqVtk~dYd~C~~s~pi~~~-ssG~---t~V~L~~pG~~YFICgv~gHC~~---GMKl 163 (273)
..+.+|+.+.|.-++. .|+...-+ + .++.. --|. ..++.+++|.||..|. .-|.. .|++
T Consensus 191 lvlP~g~~V~~~ltS~DViHsf~iP~---l-------g~k~daiPG~~n~~~~~~~~~G~y~g~Cs--E~CG~~Hs~M~~ 258 (298)
T 3hb3_B 191 VVVPVGKKVLVQVTATDVIHAWTIPA---F-------AVKQDAVPGRIAQLWFSVDQEGVYFGQCS--ELCGINHAYMPI 258 (298)
T ss_dssp EEEESSSEEEEEEEESSSCEEEEEGG---G-------TEEEEECTTCCEEEEEECSSSEEEEECCC--SCCSTTTTSCCE
T ss_pred EEEEcCCEEEEEEEeCCccceeeEcc---c-------CceEEecCCceEEEEEEeCCCEEEEEEcc--cccCcCccCCee
Confidence 3566788888877752 24433211 0 01110 1132 3688999999999999 46755 4999
Q ss_pred EEEEeec
Q 047972 164 IVVVMAV 170 (273)
Q Consensus 164 aI~V~a~ 170 (273)
.|.|.+.
T Consensus 259 ~v~vvs~ 265 (298)
T 3hb3_B 259 VVKAVSQ 265 (298)
T ss_dssp EEEEECH
T ss_pred EEEEEcH
Confidence 9998754
No 57
>1yel_A AT1G16640; CESG, protein structure initiative, structural genomics, center for eukaryotic structural genomics, unknown function; NMR {Arabidopsis thaliana} SCOP: b.142.1.2
Probab=67.52 E-value=2.3 Score=32.54 Aligned_cols=26 Identities=15% Similarity=0.336 Sum_probs=19.3
Q ss_pred hhccCCeEEeCCEEEEEeeCCCCeEEEE
Q 047972 88 HWAERMRFQVNDSLYFKYKKGSDSVLVV 115 (273)
Q Consensus 88 ~WAs~ktF~VGDtLvF~y~~~~HsVvqV 115 (273)
+.+..+..++||.|+|+|..+ ..++|
T Consensus 71 ~Fv~~~~L~~GD~lvF~~~~~--~~f~V 96 (104)
T 1yel_A 71 NFVKDNNLEDGKYLQFIYDRD--RTFYV 96 (104)
T ss_dssp HHHHHHTCCTTCEEEEEECSS--SEEEE
T ss_pred HHHHHcCCCCCCEEEEEEcCC--CeEEE
Confidence 345677899999999999864 33444
No 58
>3iuw_A Activating signal cointegrator; NP_814290.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative; HET: MSE; 1.58A {Enterococcus faecalis V583}
Probab=62.08 E-value=4.9 Score=30.80 Aligned_cols=16 Identities=44% Similarity=0.735 Sum_probs=12.3
Q ss_pred CeEEeCCEEEEE-eeCC
Q 047972 93 MRFQVNDSLYFK-YKKG 108 (273)
Q Consensus 93 ktF~VGDtLvF~-y~~~ 108 (273)
+.|++||.|+|. |+.+
T Consensus 36 r~~~vGD~l~l~E~~~g 52 (83)
T 3iuw_A 36 RNFQVGDILILEEYMNG 52 (83)
T ss_dssp SCCCTTCEEEEEEEETT
T ss_pred cCCCCCCEEEEEEccCC
Confidence 459999999995 6533
No 59
>4i1k_A B3 domain-containing transcription factor VRN1; B3 domain beta-barrel, DNA binding protein; 1.60A {Arabidopsis thaliana}
Probab=60.12 E-value=4.1 Score=33.53 Aligned_cols=28 Identities=21% Similarity=0.233 Sum_probs=20.9
Q ss_pred hhccCCeEEeCCEEEEEeeCCCCeEEEE
Q 047972 88 HWAERMRFQVNDSLYFKYKKGSDSVLVV 115 (273)
Q Consensus 88 ~WAs~ktF~VGDtLvF~y~~~~HsVvqV 115 (273)
..+..+.+++||.++|++.....-+++|
T Consensus 110 ~Fv~dn~L~~GD~cvFeli~~~~~~f~V 137 (146)
T 4i1k_A 110 EFTLENNLGEGDVCVFELLRTRDFVLKV 137 (146)
T ss_dssp HHHHHTTCCTTCEEEEEECSSSSCEEEE
T ss_pred HHHHHcCCCCCCEEEEEEecCCceEEEE
Confidence 4456789999999999998753335555
No 60
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=55.12 E-value=14 Score=34.35 Aligned_cols=74 Identities=19% Similarity=0.240 Sum_probs=43.7
Q ss_pred CCeEEeCCEEEEEeeCC-----CCeEEE--EcccCCCccCCCCCCcccCCCCe---EEEecCcccEEEEeCCC---CCCC
Q 047972 92 RMRFQVNDSLYFKYKKG-----SDSVLV--VTKDDYFSCNNKKPVQSLTDGES---VFSFDHSGPYFFISGNA---DNCN 158 (273)
Q Consensus 92 ~ktF~VGDtLvF~y~~~-----~HsVvq--Vtk~dYd~C~~s~pi~~~ssG~t---~V~L~~pG~~YFICgv~---gHC~ 158 (273)
..+++.||++++++.+. .|++.. +...| .- .. .....-|.. .|+.+.+|+|||-|... .|=.
T Consensus 196 ~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~~~~D--G~--~~-~~~i~pG~~~~~~~~~~~~G~~~yh~h~~~~~~~~~ 270 (447)
T 2dv6_A 196 FLRVRVGDTVELHLKNHKDSLMVHSVDFHGATGPG--GA--AA-FTQTDPGEETVVTFKALIPGIYVYHCATPSVPTHIT 270 (447)
T ss_dssp CEEEETTCEEEEEEEECTTCSSCBCCEETTCCSGG--GG--GG-GCCBCTTCEEEEEEECCSCEEEEEECCSSSHHHHHH
T ss_pred eEEecCCCEEEEEEEeCCCCceeEEEeeccccCCC--CC--Cc-cEEeCCCCEEEEEEECCCCeEEEEEeCCCChHHHHh
Confidence 35788899999988764 133321 11111 00 00 011334543 56678899999999762 2335
Q ss_pred CCCeEEEEEeec
Q 047972 159 KGQKLIVVVMAV 170 (273)
Q Consensus 159 ~GMKlaI~V~a~ 170 (273)
.||...|.|...
T Consensus 271 ~Gl~g~l~v~~~ 282 (447)
T 2dv6_A 271 NGMYGLLLVEPE 282 (447)
T ss_dssp TTCEEEEEEECT
T ss_pred CCCEEEEEEeCC
Confidence 799999988743
No 61
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=51.70 E-value=13 Score=32.69 Aligned_cols=93 Identities=6% Similarity=0.042 Sum_probs=52.9
Q ss_pred cccCCCCCchhhccCCeEEeCCEEEEEeeC---CCCeEE------EEcccC-CCccCCCCC-C--cccCCCCe---EEEe
Q 047972 78 WVVKPYENYNHWAERMRFQVNDSLYFKYKK---GSDSVL------VVTKDD-YFSCNNKKP-V--QSLTDGES---VFSF 141 (273)
Q Consensus 78 W~~~P~~~Yt~WAs~ktF~VGDtLvF~y~~---~~HsVv------qVtk~d-Yd~C~~s~p-i--~~~ssG~t---~V~L 141 (273)
|.+|.. .|. =....+++.||++++.+.+ ..|.+. +|..++ ++.-..... . .....|.. .+..
T Consensus 157 ~~iNG~-~~~-~~p~i~v~~G~~vri~l~N~~~~~Hp~HlHG~~f~v~~~G~~~~p~~~~~~~Dtv~v~pg~~~~~~~~~ 234 (276)
T 3kw8_A 157 MTINNR-KPH-TGPDFEATVGDRVEIVMITHGEYYHTFHMHGHRWADNRTGILTGPDDPSRVIDNKITGPADSFGFQIIA 234 (276)
T ss_dssp TEETTC-CTT-CCCCEEEETTCEEEEEEEEESSCCEEEEETTCCEESSSSSSCCSTTCCCCEESEEEECTTCEEEEEEET
T ss_pred ccccee-ccc-CCCCEEEecCCEEEEEEecCCCcceeEEEccceeEEeccCccCCCcccccCCccEEeCCCceEEEEEEe
Confidence 877632 121 1123588999999887764 235543 221111 110000000 0 01122332 3444
Q ss_pred c---CcccEEEEeCCCCCCCCCCeEEEEEeecCC
Q 047972 142 D---HSGPYFFISGNADNCNKGQKLIVVVMAVRN 172 (273)
Q Consensus 142 ~---~pG~~YFICgv~gHC~~GMKlaI~V~a~~~ 172 (273)
+ .+|+++|-|-+..|=+.||...+.|.....
T Consensus 235 ~~~~npG~w~~HCH~~~H~~~GM~g~~~V~~~~~ 268 (276)
T 3kw8_A 235 GEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDG 268 (276)
T ss_dssp TTTTCSEEEEEEECSHHHHHTTCEEEEEEECTTS
T ss_pred ccCCCCCeEEEECCCchHhhCCCeEEEEEeCCCC
Confidence 4 589999999999999999999999997653
No 62
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=51.46 E-value=15 Score=33.35 Aligned_cols=77 Identities=13% Similarity=0.158 Sum_probs=44.4
Q ss_pred CCeEEeCCEEEEEeeCCC---CeEEE----Eccc-CCCcc-CCCCCCcccCCCCe---EEEecCcccEEEEeCCCC--CC
Q 047972 92 RMRFQVNDSLYFKYKKGS---DSVLV----VTKD-DYFSC-NNKKPVQSLTDGES---VFSFDHSGPYFFISGNAD--NC 157 (273)
Q Consensus 92 ~ktF~VGDtLvF~y~~~~---HsVvq----Vtk~-dYd~C-~~s~pi~~~ssG~t---~V~L~~pG~~YFICgv~g--HC 157 (273)
..+++.||++++++.+.. ++|.. +... ..|.= ..+. ....-|.+ .|+++++|+|||-|.... |=
T Consensus 36 ~I~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGvp~vtq--~~I~PG~~~~y~f~~~~~Gt~wyH~H~~~~~q~ 113 (339)
T 2zwn_A 36 LIHVQEGDDVIVNVTNNTSLPHTIHWHGVHQKGTWRSDGVPGVTQ--QPIEAGDSYTYKFKADRIGTLWYHCHVNVNEHV 113 (339)
T ss_dssp EEEEETTCEEEEEEEEESSSCBCCEEETCCCTTCGGGSCCBTTTB--CCBCTTCEEEEEEECCSCEEEEEECCSSHHHHT
T ss_pred eEEEECCCEEEEEEEECCCCCccEEeCCCCcCCCcccCCCCcccc--CccCCCCeEEEEEECCCCEEEEEEecCCchhhh
Confidence 357899999999887532 23221 1111 01110 0000 01223443 678889999999998654 44
Q ss_pred C-CCCeEEEEEeec
Q 047972 158 N-KGQKLIVVVMAV 170 (273)
Q Consensus 158 ~-~GMKlaI~V~a~ 170 (273)
. .||...+.|...
T Consensus 114 ~~~Gl~G~liV~p~ 127 (339)
T 2zwn_A 114 GVRGMWGPLIVDPK 127 (339)
T ss_dssp TTSCCEEEEEEECS
T ss_pred hcCCceEeEEecCC
Confidence 4 899988888643
No 63
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=50.96 E-value=13 Score=33.27 Aligned_cols=35 Identities=20% Similarity=0.358 Sum_probs=30.3
Q ss_pred EEEecCcccEEEEeCCCCCC-CCCCeEEEEEeecCC
Q 047972 138 VFSFDHSGPYFFISGNADNC-NKGQKLIVVVMAVRN 172 (273)
Q Consensus 138 ~V~L~~pG~~YFICgv~gHC-~~GMKlaI~V~a~~~ 172 (273)
.|+.+++|.|+|.|....|+ +.||...++|.....
T Consensus 286 lv~~~~pG~y~~~~h~~~~~~~~G~~~~~~V~~~~~ 321 (336)
T 1oe1_A 286 LYTFKQPGVYAYLNHNLIEAFELGAAGHIKVEGKWN 321 (336)
T ss_dssp EEECCSCEEEEEEESSHHHHHTTSCEEEEEEESCCC
T ss_pred EEEcCCCceEEEEechhhccccCCCeEEEEECCCCC
Confidence 67888999999999988888 899999999986543
No 64
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=50.81 E-value=13 Score=32.60 Aligned_cols=65 Identities=22% Similarity=0.331 Sum_probs=41.3
Q ss_pred CCeEEeCCEEEEEeeCC--CCeEEEEcccCCCccCCCCCCccc-CCCC---eEEEecCcccEEEEeCCCCCCCC---CCe
Q 047972 92 RMRFQVNDSLYFKYKKG--SDSVLVVTKDDYFSCNNKKPVQSL-TDGE---SVFSFDHSGPYFFISGNADNCNK---GQK 162 (273)
Q Consensus 92 ~ktF~VGDtLvF~y~~~--~HsVvqVtk~dYd~C~~s~pi~~~-ssG~---t~V~L~~pG~~YFICgv~gHC~~---GMK 162 (273)
...+.+|+.|.|.-++. .|+...-. +. ++.. --|. ..++.+++|.||..|. ..|.. .|+
T Consensus 42 ~l~lP~g~~V~~~lTS~DViHSF~IP~---lg-------vK~daiPGr~n~l~~~~~~pG~y~g~Cs--E~CG~~Hs~M~ 109 (205)
T 1cyx_A 42 EIAFPANTPVYFKVTSNSVMHSFFIPR---LG-------SQIYAMAGMQTRLHLIANEPGTYDGICA--EICGPGHSGMK 109 (205)
T ss_dssp EEEEETTSCEEEEEEESSSCEEEEEGG---GT-------EEEEECTTCCEEEEECCSSSEEEEEEEC--SCCSTTSTTCC
T ss_pred eEEEeCCCEEEEEEecCCceeeEEecc---cC-------cEEEecCCceEEEEEEeCCCeEEEEEcc--cccccchhhce
Confidence 34677888888888753 24433211 10 1110 1122 3677899999999999 56765 499
Q ss_pred EEEEEe
Q 047972 163 LIVVVM 168 (273)
Q Consensus 163 laI~V~ 168 (273)
+.|.|.
T Consensus 110 ~~v~vv 115 (205)
T 1cyx_A 110 FKAIAT 115 (205)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999988
No 65
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=49.34 E-value=9.1 Score=34.42 Aligned_cols=34 Identities=24% Similarity=0.402 Sum_probs=29.9
Q ss_pred EEEecCcccEEEEeCCCCCC-CCCCeEEEEEeecC
Q 047972 138 VFSFDHSGPYFFISGNADNC-NKGQKLIVVVMAVR 171 (273)
Q Consensus 138 ~V~L~~pG~~YFICgv~gHC-~~GMKlaI~V~a~~ 171 (273)
.|+.+.+|.|+|.|-...|+ +.||.-.++|....
T Consensus 286 ~v~a~~pG~y~~~ch~~~h~~~~Gm~~~~~v~~~~ 320 (333)
T 1mzy_A 286 LYKFLQPGVYAYVNHNLIEAVHKGATAHVLVEGEW 320 (333)
T ss_dssp EEECCSCEEEEEEESSHHHHHTTCCEEEEEEESCC
T ss_pred EEEcCCCEEEEEecChhhhHhhCCCEEEEEEcCCC
Confidence 67788999999999999999 99999999998643
No 66
>1fft_B Ubiquinol oxidase; electron transport, cytochrome oxidase, membrane protein, oxidoreductase; HET: HEM HEO; 3.50A {Escherichia coli} SCOP: b.6.1.2 f.17.2.1
Probab=49.23 E-value=48 Score=30.69 Aligned_cols=69 Identities=17% Similarity=0.211 Sum_probs=42.4
Q ss_pred CCeEEeCCEEEEEeeCC--CCeEEEEcccCCCccCCCCCCcccCCCCeEEEecCcccEEEEeCCCCCCCC---CCeEEEE
Q 047972 92 RMRFQVNDSLYFKYKKG--SDSVLVVTKDDYFSCNNKKPVQSLTDGESVFSFDHSGPYFFISGNADNCNK---GQKLIVV 166 (273)
Q Consensus 92 ~ktF~VGDtLvF~y~~~--~HsVvqVtk~dYd~C~~s~pi~~~ssG~t~V~L~~pG~~YFICgv~gHC~~---GMKlaI~ 166 (273)
...+.+|..+.|+-++. .|+...-+ -.. ..|.- | .......++.+++|.||..|. ..|.. .|++.|.
T Consensus 152 ~l~lP~g~~V~~~lTS~DViHsf~IP~-lg~-k~Dai-P---Gr~n~~~~~~~~~G~y~g~Cs--E~CG~~Hs~M~~~v~ 223 (315)
T 1fft_B 152 EIAFPANTPVYFKVTSNSVMNSFFIPR-LGS-QIYAM-A---GMQTRLHLIANEPGTYDGISA--SYSGPGFSGMKFKAI 223 (315)
T ss_dssp BCCCCSSSEEEEEECBSSSCEEEEEGG-GTE-EEEEC-B---TSCEEEEEECCSCBCCEEBCC--SCCSTTTTTCCEECC
T ss_pred eEEEeCCCEEEEEEEeCCccceeeecc-cCc-EEeec-C---CcceeeEEecCCCeEEEEecc--ccchhhHHhccceEE
Confidence 45788999999998863 24443211 000 00100 0 011123688899999999999 57765 4999988
Q ss_pred Ee
Q 047972 167 VM 168 (273)
Q Consensus 167 V~ 168 (273)
|.
T Consensus 224 vv 225 (315)
T 1fft_B 224 AT 225 (315)
T ss_dssp BC
T ss_pred Ee
Confidence 87
No 67
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=48.75 E-value=20 Score=32.79 Aligned_cols=31 Identities=10% Similarity=0.166 Sum_probs=27.5
Q ss_pred cCcccEEEEeCCCCCCCCCCeEEEEEeecCC
Q 047972 142 DHSGPYFFISGNADNCNKGQKLIVVVMAVRN 172 (273)
Q Consensus 142 ~~pG~~YFICgv~gHC~~GMKlaI~V~a~~~ 172 (273)
+.+|.++|-|-+..|=+.||...+.|.....
T Consensus 279 ~~pG~w~~HCHi~~H~~~GM~g~~~V~~~~~ 309 (343)
T 3cg8_A 279 VGAGAWMYHCHVQSHSDMGMVGLFLVKKPDG 309 (343)
T ss_dssp TCSEEEEEEECSHHHHHTTCEEEEEEECTTS
T ss_pred CCCeeEEEeCCCHHHHhccCcEEEEEecCCC
Confidence 5799999999999999999999999986553
No 68
>3l6w_A Hemocyanin 1; cupredoxin domain, copper-binding protein, metal-binding, oxygen binding; 4.00A {Megathura crenulata} PDB: 3qjo_A
Probab=47.60 E-value=11 Score=37.25 Aligned_cols=30 Identities=27% Similarity=0.474 Sum_probs=25.2
Q ss_pred EEecCcccEEEEeCCCCCCCCCC-eEEEEEe
Q 047972 139 FSFDHSGPYFFISGNADNCNKGQ-KLIVVVM 168 (273)
Q Consensus 139 V~L~~pG~~YFICgv~gHC~~GM-KlaI~V~ 168 (273)
|.--++|.|||..+...-|++|- |+.|.|.
T Consensus 461 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 491 (491)
T 3l6w_A 461 MYSVESGDYFMTASTTELCNDNNLRIHVHVD 491 (491)
T ss_pred eEecCCCceEecCChHHHHhCCceeEEEEeC
Confidence 33445799999999999999998 9999884
No 69
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=47.52 E-value=15 Score=33.04 Aligned_cols=31 Identities=19% Similarity=0.338 Sum_probs=26.1
Q ss_pred EEEecCcccEEEEeCCCCCCCCC---CeEEEEEeec
Q 047972 138 VFSFDHSGPYFFISGNADNCNKG---QKLIVVVMAV 170 (273)
Q Consensus 138 ~V~L~~pG~~YFICgv~gHC~~G---MKlaI~V~a~ 170 (273)
.++.+++|.||..|+ .-|..| |++.|.|.+.
T Consensus 214 ~~~~~~~G~y~g~Cs--e~CG~~H~~M~~~v~vv~~ 247 (262)
T 2gsm_B 214 WFRAEREGIFFGQCS--ELCGISHAYMPITVKVVSE 247 (262)
T ss_dssp EEECCSCEEEEECCC--SCCSTTGGGCCEEEEEECH
T ss_pred EEecCCcEEEEEECh--HhcccCcccCeEEEEEEcH
Confidence 688999999999999 578765 9999988753
No 70
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=44.93 E-value=14 Score=32.44 Aligned_cols=31 Identities=10% Similarity=0.344 Sum_probs=25.7
Q ss_pred EEEecCcccEEEEeCCCCCCCCC---CeEEEEEeec
Q 047972 138 VFSFDHSGPYFFISGNADNCNKG---QKLIVVVMAV 170 (273)
Q Consensus 138 ~V~L~~pG~~YFICgv~gHC~~G---MKlaI~V~a~ 170 (273)
.++.+++|.||..|. .-|..| |++.|.|.+.
T Consensus 183 ~~~~~~~G~y~g~Cs--e~CG~~Hs~M~~~v~vv~~ 216 (227)
T 1v54_B 183 TLMSSRPGLYYGQCS--EICGSNHSFMPIVLELVPL 216 (227)
T ss_dssp EECCSSCEEEEECCC--SCCSTTGGGCCEEEEEECH
T ss_pred EEecCCcEEEEEEeh--hhcccccccCeEEEEEEcH
Confidence 678899999999998 578775 8998888753
No 71
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=44.63 E-value=94 Score=29.86 Aligned_cols=34 Identities=21% Similarity=0.313 Sum_probs=28.5
Q ss_pred EEEe-cCcccEEEEeCCCCCCCCCCeEEEEEeecC
Q 047972 138 VFSF-DHSGPYFFISGNADNCNKGQKLIVVVMAVR 171 (273)
Q Consensus 138 ~V~L-~~pG~~YFICgv~gHC~~GMKlaI~V~a~~ 171 (273)
.+++ ++.|+|||=|-...|=..||-..+.|....
T Consensus 117 ~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~ 151 (521)
T 1v10_A 117 DFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDPN 151 (521)
T ss_dssp EEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTT
T ss_pred EEecCCCCccEEEEeccCCchhcCceEEEEEcCCc
Confidence 5664 579999999999888888999999998654
No 72
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=43.33 E-value=17 Score=32.75 Aligned_cols=76 Identities=9% Similarity=0.118 Sum_probs=44.0
Q ss_pred CeEEeCCEEEEEeeCC---CCeEEEE--ccc---CCCcc-CCCCCCcccCCCCe---EEEecCcccEEEEeCCCCC-C--
Q 047972 93 MRFQVNDSLYFKYKKG---SDSVLVV--TKD---DYFSC-NNKKPVQSLTDGES---VFSFDHSGPYFFISGNADN-C-- 157 (273)
Q Consensus 93 ktF~VGDtLvF~y~~~---~HsVvqV--tk~---dYd~C-~~s~pi~~~ssG~t---~V~L~~pG~~YFICgv~gH-C-- 157 (273)
.+++.||+|++++.+. .|++..- ... ..|.= ..+ .....-|.+ .++.+++|++||-|..... .
T Consensus 36 i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~p~~t--~~~i~PG~~~~y~f~~~~~Gt~wYH~H~~~~~~~~ 113 (318)
T 3g5w_A 36 IHVMEGDDVTVNVTNMTTLPHTIHWHGMLQRGTWQSDGVPHAT--QHAIEPGDTFTYKFKAEPAGTMWYHCHVNVNEHVT 113 (318)
T ss_dssp EEEETTCEEEEEEEECSSSCBCCEEETCCCTTCGGGSCCBTTT--BCCBCTTCEEEEEEECCSCEEEEEECCSSHHHHHH
T ss_pred EEEeCCCEEEEEEEeCCCCceeEEecCcCCCCCcccCCCcccc--cccCCCCCEEEEEEEcCCCEEEEEEccCChhhhhc
Confidence 4789999999998863 2344321 000 11110 000 011123443 6788899999999987421 1
Q ss_pred CCCCeEEEEEeec
Q 047972 158 NKGQKLIVVVMAV 170 (273)
Q Consensus 158 ~~GMKlaI~V~a~ 170 (273)
..||...+.|...
T Consensus 114 ~~Gl~G~lIV~~~ 126 (318)
T 3g5w_A 114 MRGMWGPLIVEPK 126 (318)
T ss_dssp HSCCEEEEEEECS
T ss_pred cCCCEEEEEEcCC
Confidence 2699999988754
No 73
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=42.70 E-value=38 Score=32.77 Aligned_cols=77 Identities=14% Similarity=0.169 Sum_probs=48.8
Q ss_pred CeEEeCCEEEEEeeCCC----CeEEE----EcccC-CCcc-CCCCCCcccCCCCe---EEEecCcccEEEEeCCCCCCCC
Q 047972 93 MRFQVNDSLYFKYKKGS----DSVLV----VTKDD-YFSC-NNKKPVQSLTDGES---VFSFDHSGPYFFISGNADNCNK 159 (273)
Q Consensus 93 ktF~VGDtLvF~y~~~~----HsVvq----Vtk~d-Yd~C-~~s~pi~~~ssG~t---~V~L~~pG~~YFICgv~gHC~~ 159 (273)
.+++.||+|+.++.+.- ++|.. +..+. .|.= ..+. ....-|.+ .++++.+|+|||=|-...+=..
T Consensus 36 I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~~vtq--~~I~PG~s~tY~f~~~~~GT~wYHsH~~~q~~~ 113 (552)
T 1aoz_A 36 IRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQ--CAINPGETFFYNFTVDNPGTFFYHGHLGMQRSA 113 (552)
T ss_dssp EEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBTTTB--CCBCTTCEEEEEEECCSCEEEEEEECSTTTGGG
T ss_pred EEEeCCCEEEEEEEeCCCCCCeeEEeCCCccCCCcccCCCccccc--CCcCCCCeEEEEEECCCCEEEEEEECchhHHhc
Confidence 57899999999888642 33321 11110 1110 0000 01123443 6788899999999998888788
Q ss_pred CCeEEEEEeecC
Q 047972 160 GQKLIVVVMAVR 171 (273)
Q Consensus 160 GMKlaI~V~a~~ 171 (273)
||-..+.|....
T Consensus 114 Gl~G~liV~~~~ 125 (552)
T 1aoz_A 114 GLYGSLIVDPPQ 125 (552)
T ss_dssp TCEEEEEEECCT
T ss_pred cCeeeEEEeCCc
Confidence 999999998764
No 74
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=40.85 E-value=1.3e+02 Score=29.01 Aligned_cols=77 Identities=16% Similarity=0.189 Sum_probs=47.7
Q ss_pred CeEEeCCEEEEEeeCCC--------CeEEEE--cccCCCccCCCCCC----cccCCCCe---EEEe-cCcccEEEEeCCC
Q 047972 93 MRFQVNDSLYFKYKKGS--------DSVLVV--TKDDYFSCNNKKPV----QSLTDGES---VFSF-DHSGPYFFISGNA 154 (273)
Q Consensus 93 ktF~VGDtLvF~y~~~~--------HsVvqV--tk~dYd~C~~s~pi----~~~ssG~t---~V~L-~~pG~~YFICgv~ 154 (273)
.+++.||+|+.++.++- ++|..= .+. ......+.- ....-|.+ .+++ ++.|+|||-|-..
T Consensus 36 I~~~~GD~v~V~v~N~l~~~~~~~~tsiHwHGl~~~--~~~~~DGv~~vtq~pI~PG~s~tY~f~~~~~~GT~wYHsH~~ 113 (499)
T 3pxl_A 36 VAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQH--GTNWADGPAFINQCPISPGHSFLYDFQVPDQAGTFWYHSHLS 113 (499)
T ss_dssp EEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCT--TCGGGSCCBTTTBCCBCTTCEEEEEEECSSCCEEEEEEECST
T ss_pred EEEeCCCEEEEEEEECCCCccCCCceEEEeCCcccC--CCccccCCCccccCCCCCCCeEEEEEEcCCCCceeeeeccch
Confidence 48899999999887642 234321 000 001111110 01133443 6777 6799999999988
Q ss_pred CCCCCCCeEEEEEeecC
Q 047972 155 DNCNKGQKLIVVVMAVR 171 (273)
Q Consensus 155 gHC~~GMKlaI~V~a~~ 171 (273)
.|=..||...+.|....
T Consensus 114 ~q~~~GL~G~lIV~~~~ 130 (499)
T 3pxl_A 114 TQYCDGLRGPFVVYDPN 130 (499)
T ss_dssp TGGGGTCEEEEEEECTT
T ss_pred hHHhccceeEEEEcCCc
Confidence 77778999999998654
No 75
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=40.83 E-value=1.2e+02 Score=29.01 Aligned_cols=77 Identities=17% Similarity=0.140 Sum_probs=47.7
Q ss_pred CeEEeCCEEEEEeeCCC--------CeEEEE--cccCCCccCCCCCC----cccCCCCe---EEEe-cCcccEEEEeCCC
Q 047972 93 MRFQVNDSLYFKYKKGS--------DSVLVV--TKDDYFSCNNKKPV----QSLTDGES---VFSF-DHSGPYFFISGNA 154 (273)
Q Consensus 93 ktF~VGDtLvF~y~~~~--------HsVvqV--tk~dYd~C~~s~pi----~~~ssG~t---~V~L-~~pG~~YFICgv~ 154 (273)
.+++.||+|+.++.++- ++|..= .+. ......+.- ....-|.+ .+++ ++.|+|||-|-..
T Consensus 37 I~~~~GD~v~v~v~N~l~~~~~~~~tsiHwHGl~~~--~~~~~DGv~~vtq~pI~PG~sftY~f~~~~~~GT~wYHsH~~ 114 (495)
T 3t6v_A 37 IAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQK--GTNWADGPAFITQCPIIVGNSFSYNFNVPGMAGTYWYHSHLT 114 (495)
T ss_dssp EEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCT--TCGGGSCCBTTTBCCBCTTCEEEEEEECTTCCEEEEEEECST
T ss_pred EEEECCcEEEEEEEECCCCccCCCceEEEeCCcccC--CCccccCCCccccCCCCCCCeEEEEEEeCCCCceeeeeccch
Confidence 47899999999987642 233221 000 001111110 01123443 6777 6799999999988
Q ss_pred CCCCCCCeEEEEEeecC
Q 047972 155 DNCNKGQKLIVVVMAVR 171 (273)
Q Consensus 155 gHC~~GMKlaI~V~a~~ 171 (273)
.|=..||...+.|....
T Consensus 115 ~q~~~GL~G~lIV~~~~ 131 (495)
T 3t6v_A 115 TQYCDGLRGPFVVYDPN 131 (495)
T ss_dssp TGGGGTCEEEEEEECTT
T ss_pred hHHhcCceEEEEEcCcc
Confidence 87778999999998654
No 76
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=40.00 E-value=3.6 Score=36.96 Aligned_cols=34 Identities=9% Similarity=0.103 Sum_probs=20.5
Q ss_pred EEEecCcccEEEEeCCCCCCCCCCeEEEEEeecC
Q 047972 138 VFSFDHSGPYFFISGNADNCNKGQKLIVVVMAVR 171 (273)
Q Consensus 138 ~V~L~~pG~~YFICgv~gHC~~GMKlaI~V~a~~ 171 (273)
.++.+.+|.++|.|-+..|-..||...++|....
T Consensus 269 ~~~~~~pG~~~~hch~~~H~~~GM~~~~~V~~~~ 302 (306)
T 1sdd_A 269 NMTVSPEGRWTIASLIPRHFQAGMQAYIDIKNCA 302 (306)
T ss_dssp -------CCCCCBCCSTTTGGGTCBCCC------
T ss_pred EEEcCCCeEEEEEeCChHHHhcCCeEEEEEecCC
Confidence 5677889999999999999999999999998653
No 77
>2z0b_A GDE5, KIAA1434, putative glycerophosphodiester phosphodiesterase; CBM20 domain, starch-binding, hydrolase, STR genomics, NPPSFA; 2.00A {Homo sapiens}
Probab=39.72 E-value=15 Score=29.45 Aligned_cols=41 Identities=20% Similarity=0.262 Sum_probs=31.0
Q ss_pred eEEEEcCC--CCccccCCC-----C----CchhhccCCeEEeCCEEEEEeeC
Q 047972 67 YKFNVGGK--NGLWVVKPY-----E----NYNHWAERMRFQVNDSLYFKYKK 107 (273)
Q Consensus 67 ~~y~VGg~--~G~W~~~P~-----~----~Yt~WAs~ktF~VGDtLvF~y~~ 107 (273)
..|+||+. .|.|+.... . +|..|.....+..|..++|||-.
T Consensus 24 ~v~vvGs~~~LG~W~p~~av~L~~~~~~~~~~~W~~~v~lp~~~~~eYKyvi 75 (131)
T 2z0b_A 24 VFAICGSCDALGNWNPQNAVALLPENDTGESMLWKATIVLSRGVSVQYRYFK 75 (131)
T ss_dssp EEEEEESSGGGTTTCGGGCEECEECCTTCCSSEEEEEEEECTTCCEEEEEEE
T ss_pred EEEEEeCCCcCCCCCccccccccccccCCCCCeEEEEEEcCCCCcEEEEEEE
Confidence 46889983 567975311 2 68899998888889999999953
No 78
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=39.51 E-value=29 Score=33.77 Aligned_cols=77 Identities=8% Similarity=0.028 Sum_probs=48.2
Q ss_pred CeEEeCCEEEEEeeCCC----CeEEE--EcccCCCccCCCCCC----cccCC-CCe---EEEecCcccEEEEeCCCCCCC
Q 047972 93 MRFQVNDSLYFKYKKGS----DSVLV--VTKDDYFSCNNKKPV----QSLTD-GES---VFSFDHSGPYFFISGNADNCN 158 (273)
Q Consensus 93 ktF~VGDtLvF~y~~~~----HsVvq--Vtk~dYd~C~~s~pi----~~~ss-G~t---~V~L~~pG~~YFICgv~gHC~ 158 (273)
.+++.||+|+.++.++- ++|.. +... ......+.- ....- |.+ .++++++|+|||=|-...|=.
T Consensus 69 i~~~~GD~v~v~v~N~l~~~~tsiHwHG~~~~--~~~~~DG~~~~tq~~I~P~G~~~~Y~f~~~q~GT~wYH~H~~~q~~ 146 (559)
T 2q9o_A 69 IVANWGDTVEVTVINNLVTNGTSIHWHGIXQK--DTNLHDGANGVTECPIPPKGGQRTYRWRARQYGTSWYHSHFSAQYG 146 (559)
T ss_dssp EEEETTCEEEEEEEEECSSCCBCEEEETCCCT--TCGGGSCCBTTTBCCBCTTTEEEEEEEECCSCEEEEEEECSTTGGG
T ss_pred EEEeCCCEEEEEEEeCCCCCCceEEcCCCccC--CCCCcCCCCccccCccCCCCCeEEEEEECCCCEEEEEEEcccchhc
Confidence 47889999999887532 34432 1000 001111100 01123 543 688899999999999988878
Q ss_pred CCCeEEEEEeecC
Q 047972 159 KGQKLIVVVMAVR 171 (273)
Q Consensus 159 ~GMKlaI~V~a~~ 171 (273)
.||...+.|....
T Consensus 147 ~Gl~G~liV~~~~ 159 (559)
T 2q9o_A 147 NGVVGTIQINGPA 159 (559)
T ss_dssp GTCEEEEEEECCC
T ss_pred CCceEEEEecCCC
Confidence 8999999888543
No 79
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=38.54 E-value=43 Score=33.23 Aligned_cols=34 Identities=12% Similarity=0.107 Sum_probs=29.2
Q ss_pred EEEecCcccEEEEeCCCCCCCCCCeEEEEEeecC
Q 047972 138 VFSFDHSGPYFFISGNADNCNKGQKLIVVVMAVR 171 (273)
Q Consensus 138 ~V~L~~pG~~YFICgv~gHC~~GMKlaI~V~a~~ 171 (273)
.+++++.|+|||=|-...+=..||...+.|....
T Consensus 156 ~f~~~q~GT~WYHsH~~~q~~~GL~G~lIV~~p~ 189 (580)
T 3sqr_A 156 KFQVTQYGTTWYHSHFSLQYGDGLFGPLIINGPA 189 (580)
T ss_dssp EEECCCCEEEEEEECSTTGGGGTCEEEEEEECCC
T ss_pred EEECCCCcceEEeecccccccCcCEEEEEeeCcc
Confidence 6888999999999998877788999999998543
No 80
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=38.21 E-value=39 Score=31.33 Aligned_cols=35 Identities=17% Similarity=0.330 Sum_probs=29.3
Q ss_pred EEEecCcccEEEEeCCCCCC-CCCCeEEEEEeecCC
Q 047972 138 VFSFDHSGPYFFISGNADNC-NKGQKLIVVVMAVRN 172 (273)
Q Consensus 138 ~V~L~~pG~~YFICgv~gHC-~~GMKlaI~V~a~~~ 172 (273)
.|+.+++|.|+|.|....|+ ..||...+.|.....
T Consensus 265 ~v~~~~~G~y~~~~~~~~~~~~~g~~a~l~v~~~~~ 300 (442)
T 2zoo_A 265 EFKVEVPGTFILVDHSIFRAFNKGALAMLKVEGPDD 300 (442)
T ss_dssp EEECCSCEEEEEEESSTHHHHTTSCEEEEEEESCCC
T ss_pred EEEcCCCCeEEEEecccccccccCceEEEEecCCCC
Confidence 57888999999999988887 789988888876543
No 81
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=35.75 E-value=21 Score=37.72 Aligned_cols=76 Identities=14% Similarity=0.051 Sum_probs=52.1
Q ss_pred CCeEEeCCEEEEEeeCC-----CCeEEEEc------ccCCCccCCCCCCcccCCCCeEEEecCcccEEEEeCCCCCCCCC
Q 047972 92 RMRFQVNDSLYFKYKKG-----SDSVLVVT------KDDYFSCNNKKPVQSLTDGESVFSFDHSGPYFFISGNADNCNKG 160 (273)
Q Consensus 92 ~ktF~VGDtLvF~y~~~-----~HsVvqVt------k~dYd~C~~s~pi~~~ssG~t~V~L~~pG~~YFICgv~gHC~~G 160 (273)
..++..||+|+.+.... .|++.+-. ...+++|... ....-...++.+.+|++|+-|-+..|=..|
T Consensus 633 ~l~~~~gd~v~~~v~~~g~~~~~Hgl~~~g~t~~~dG~~~~t~~i~----pg~~~t~~~~~~~~Gt~~~h~h~~~~~~~G 708 (1065)
T 2j5w_A 633 GLTMCKGDSVVWYLFSAGNEADVHGIYFSGNTYLWRGERRDTANLF----PQTSLTLHMWPDTEGTFNVECLTTDHYTGG 708 (1065)
T ss_dssp CCEEETTCCEEEEEECCCSTTCCEEEEETTCCEEETTEEESEEEEC----TTCEEEEEECCCSCEEEEEEECSHHHHHTT
T ss_pred ceEEeCCCEEEEEEEcCCCcceEEeeEEeCCceeecCeecceEeec----CCceEEEEEecCCCeEEEEecCCCcccCCC
Confidence 46899999999887742 36665421 2223445432 111112367778899999999999999999
Q ss_pred CeEEEEEeecC
Q 047972 161 QKLIVVVMAVR 171 (273)
Q Consensus 161 MKlaI~V~a~~ 171 (273)
|+..+.|....
T Consensus 709 m~g~~~V~~~~ 719 (1065)
T 2j5w_A 709 MKQKYTVNQCR 719 (1065)
T ss_dssp CEEEEEEECCS
T ss_pred cEEEEEEcCCc
Confidence 99999997654
No 82
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=34.54 E-value=54 Score=30.65 Aligned_cols=73 Identities=15% Similarity=0.246 Sum_probs=44.6
Q ss_pred CeEEeCCEEEEEeeCCC---CeEEE----EcccCCCccCCCCCCcccCCCCe---EEEe--cCcccEEEEeCCCC----C
Q 047972 93 MRFQVNDSLYFKYKKGS---DSVLV----VTKDDYFSCNNKKPVQSLTDGES---VFSF--DHSGPYFFISGNAD----N 156 (273)
Q Consensus 93 ktF~VGDtLvF~y~~~~---HsVvq----Vtk~dYd~C~~s~pi~~~ssG~t---~V~L--~~pG~~YFICgv~g----H 156 (273)
.+++.||+|+.++.++- ++|.. ++. ..| +......-|.+ .+++ +.+|+|||-|-..+ |
T Consensus 49 i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~-~~D-----G~~~~I~PG~~~~Y~f~~~~~~~GT~wYH~H~~~~t~~q 122 (439)
T 2xu9_A 49 LRVRPRDTVRLTLENRLPEPTNLHWHGLPISP-KVD-----DPFLEIPPGESWTYEFTVPKELAGTFWYHPHLHGRVAPQ 122 (439)
T ss_dssp EEECTTCEEEEEEEECSSSCBCCEEETCCCCT-TTS-----CTTCCBCTTCEEEEEEECCSSCCEEEEEECCCTTSHHHH
T ss_pred EEEeCCCEEEEEEEECCCCCcceEeCCCCCCc-ccc-----CCcccCCCCCeEEEEEecCCCCCcceEeccCCCCchHHH
Confidence 47899999998887642 33322 111 111 11112334544 5565 36899999998643 5
Q ss_pred CCCCCeEEEEEeecC
Q 047972 157 CNKGQKLIVVVMAVR 171 (273)
Q Consensus 157 C~~GMKlaI~V~a~~ 171 (273)
=..||...+.|....
T Consensus 123 ~~~Gl~G~liV~~~~ 137 (439)
T 2xu9_A 123 LFAGLLGALVVESSL 137 (439)
T ss_dssp HHTTCCEEEEECCGG
T ss_pred HHhhCeEEEEEcCcc
Confidence 567999999997643
No 83
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=33.64 E-value=46 Score=32.27 Aligned_cols=77 Identities=14% Similarity=0.239 Sum_probs=48.1
Q ss_pred CeEEeCCEEEEEeeCCCC----eEEE----Eccc-CCCc-cCCCCCCcccCCCCe---EEEec-CcccEEEEeCCCCCCC
Q 047972 93 MRFQVNDSLYFKYKKGSD----SVLV----VTKD-DYFS-CNNKKPVQSLTDGES---VFSFD-HSGPYFFISGNADNCN 158 (273)
Q Consensus 93 ktF~VGDtLvF~y~~~~H----sVvq----Vtk~-dYd~-C~~s~pi~~~ssG~t---~V~L~-~pG~~YFICgv~gHC~ 158 (273)
.+++.||+|+.++.++-. +|.. +... ..|. -..+. ....-|.+ .++++ +.|+|||-|-...|=.
T Consensus 36 i~~~~Gd~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~vtq--~pI~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~ 113 (534)
T 1zpu_A 36 ITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPFLTQ--CPIAPGSTMLYNFTVDYNVGTYWYHSHTDGQYE 113 (534)
T ss_dssp EEEETTCEEEEEEECCCSSCCBCCEEETCCCTTCGGGSCCBTTTB--CCBCTTCEEEEEEECSSCCEEEEEECCSSSGGG
T ss_pred EEEECCCEEEEEEEeCCCCCCeeEEcCCcccCCCCcccCCCcccc--CCcCCCCeEEEEEEeCccceeEEEEEcCccccc
Confidence 588999999999986432 2211 1100 1111 00000 01123443 67787 8999999999988888
Q ss_pred CCCeEEEEEeecC
Q 047972 159 KGQKLIVVVMAVR 171 (273)
Q Consensus 159 ~GMKlaI~V~a~~ 171 (273)
.||...+.|....
T Consensus 114 ~Gl~G~liV~~~~ 126 (534)
T 1zpu_A 114 DGMKGLFIIKDDS 126 (534)
T ss_dssp GTCEEEEEEECTT
T ss_pred CcceeeEEeCCCC
Confidence 8999999998654
No 84
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=32.88 E-value=51 Score=29.64 Aligned_cols=32 Identities=9% Similarity=0.218 Sum_probs=25.7
Q ss_pred EEEecCcccEEEEeCCCCCCCC------CCeEEEEEee
Q 047972 138 VFSFDHSGPYFFISGNADNCNK------GQKLIVVVMA 169 (273)
Q Consensus 138 ~V~L~~pG~~YFICgv~gHC~~------GMKlaI~V~a 169 (273)
.+..+.+|.+.|-|-+..|-.+ ||...|.+..
T Consensus 239 ~~~a~~pG~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g 276 (318)
T 3g5w_A 239 ILNMDNPGLWMIHDHVDTHTTNGDKPDGGIMTTIEYEE 276 (318)
T ss_dssp EEECCSCSEEEEEESSGGGSCBTTBSSCBSEEEEEETT
T ss_pred EEECCCCeeEEEEeccHHHhhccCcCCCCCEEEEEECC
Confidence 5677899999999999999984 6666666654
No 85
>1wid_A DNA-binding protein RAV1; DNA-binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: b.142.1.2
Probab=29.62 E-value=18 Score=28.88 Aligned_cols=21 Identities=14% Similarity=0.401 Sum_probs=16.5
Q ss_pred hhccCCeEEeCCEEEEEeeCC
Q 047972 88 HWAERMRFQVNDSLYFKYKKG 108 (273)
Q Consensus 88 ~WAs~ktF~VGDtLvF~y~~~ 108 (273)
+.+..+..++||.|+|....+
T Consensus 85 ~FV~~~~L~~GD~~~F~~~~~ 105 (130)
T 1wid_A 85 RFVKEKNLRAGDVVSFSRSNG 105 (130)
T ss_dssp HHHHHTTCCTTCEEEEEECCS
T ss_pred HHHHHcCCCCCCEEEEEEecC
Confidence 345667889999999998753
No 86
>2z0t_A Putative uncharacterized protein PH0355; alpha/beta protein, RNA binding protein, structural genomics, NPPSFA; 1.80A {Pyrococcus horikoshii} PDB: 1s04_A
Probab=29.40 E-value=17 Score=28.87 Aligned_cols=11 Identities=18% Similarity=0.392 Sum_probs=10.0
Q ss_pred CeEEeCCEEEE
Q 047972 93 MRFQVNDSLYF 103 (273)
Q Consensus 93 ktF~VGDtLvF 103 (273)
+.+++||+|+|
T Consensus 32 ~~ikvGD~I~f 42 (109)
T 2z0t_A 32 RQIKPGDIIIF 42 (109)
T ss_dssp GGCCTTCEEEE
T ss_pred hcCCCCCEEEE
Confidence 47899999999
No 87
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=28.69 E-value=90 Score=27.66 Aligned_cols=78 Identities=12% Similarity=0.075 Sum_probs=44.5
Q ss_pred CeEEeCCEEEEEeeCCC---CeEEE----EcccCCCc-cCCCCC------CcccCCCCe---EEEecCc----------c
Q 047972 93 MRFQVNDSLYFKYKKGS---DSVLV----VTKDDYFS-CNNKKP------VQSLTDGES---VFSFDHS----------G 145 (273)
Q Consensus 93 ktF~VGDtLvF~y~~~~---HsVvq----Vtk~dYd~-C~~s~p------i~~~ssG~t---~V~L~~p----------G 145 (273)
.+++.||+|++++.+.. +++.. +..+ .|. ...++. .....-|.+ .+++++. |
T Consensus 62 I~v~~Gd~v~v~~~N~l~~~~siH~HGl~~~~~-~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~~~~~~gp~~~d~~~G 140 (306)
T 1sdd_A 62 LYAEVGDIMKVHFKNKAHKPLSIHAQGIKYSKF-SEGASYSDHTLPMEKMDDAVAPGQEYTYEWIISEHSGPTHDDPPCL 140 (306)
T ss_dssp EEEETTCEEEEEEEECSSSCBCCEEESSCCCTT-TSCCCSCCCCCHHHHTTTCBCTTCEEEEEEECCGGGSCCSSSCSEE
T ss_pred EEEeCCCEEEEEEEECCCCcccEeecceecccc-cCCCccCCCCcccccCCCccCCCCeEEEEEEeCCccCCCCCCCCce
Confidence 47899999999988642 23321 2111 111 111110 011233443 5666654 7
Q ss_pred cEEEEeCCCC--CCCCCCeEEEEEeecC
Q 047972 146 PYFFISGNAD--NCNKGQKLIVVVMAVR 171 (273)
Q Consensus 146 ~~YFICgv~g--HC~~GMKlaI~V~a~~ 171 (273)
++||-|-... |-..||...+.|....
T Consensus 141 T~wYHsH~~~~~q~~~GL~G~liV~~~~ 168 (306)
T 1sdd_A 141 THIYYSYVNLVEDFNSGLIGPLLICKKG 168 (306)
T ss_dssp EEEEECCSSSHHHHHTTCCEEEEEECTT
T ss_pred EEEEeccCCchhhhccCceEEEEEccCC
Confidence 9999998654 4467999999887653
No 88
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=28.59 E-value=1.7e+02 Score=27.79 Aligned_cols=34 Identities=18% Similarity=0.308 Sum_probs=27.9
Q ss_pred EEEe-cCcccEEEEeCCCCCCCCCCeEEEEEeecC
Q 047972 138 VFSF-DHSGPYFFISGNADNCNKGQKLIVVVMAVR 171 (273)
Q Consensus 138 ~V~L-~~pG~~YFICgv~gHC~~GMKlaI~V~a~~ 171 (273)
.+++ +++|+|||=|-...|=..||-..+.|....
T Consensus 96 ~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~ 130 (503)
T 1hfu_A 96 KFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDN 130 (503)
T ss_dssp EECCTTCCEEEEEEECSTTGGGGTCEEEEEEECTT
T ss_pred EEEeCCCCccEEEEecchhhhhCcceeeEEEcCCC
Confidence 5553 568999999999887788999999998654
No 89
>2qcp_X Cation efflux system protein CUSF; silver-binding, copper-binding, beta barrel, OB-fold, metall metal resistance, metal-binding; 1.00A {Escherichia coli str} PDB: 1zeq_X 3e6z_X
Probab=27.85 E-value=28 Score=25.73 Aligned_cols=17 Identities=12% Similarity=0.321 Sum_probs=14.2
Q ss_pred CCeEEeCCEEEEEeeCC
Q 047972 92 RMRFQVNDSLYFKYKKG 108 (273)
Q Consensus 92 ~ktF~VGDtLvF~y~~~ 108 (273)
-..+++||.|.|.+...
T Consensus 51 l~~lk~Gd~V~F~~~~~ 67 (80)
T 2qcp_X 51 MSEIKTGDKVAFNFVQQ 67 (80)
T ss_dssp ECCCCTTCEEEEEEEEE
T ss_pred hhcCCCCCEEEEEEEEe
Confidence 35799999999999853
No 90
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=27.82 E-value=33 Score=30.86 Aligned_cols=34 Identities=24% Similarity=0.272 Sum_probs=28.5
Q ss_pred EEEecCcccEEEEeCCCCCC-CCCCeEEEEEeecC
Q 047972 138 VFSFDHSGPYFFISGNADNC-NKGQKLIVVVMAVR 171 (273)
Q Consensus 138 ~V~L~~pG~~YFICgv~gHC-~~GMKlaI~V~a~~ 171 (273)
.|+.+.+|.|+|.|....|| ..||...+.|....
T Consensus 275 ~v~~~~pG~y~l~~h~~~~~~~~g~~a~l~~~g~~ 309 (327)
T 1kbv_A 275 EFKVDIPGNYTLVDHSIFRAFNKGALGQLKVEGAE 309 (327)
T ss_dssp EEEECSCEEEEEEESSTHHHHHSSCEEEEEEESCC
T ss_pred EEEeCCCeEEEEEeccccccccCCcEEEEEECCCC
Confidence 67778899999999999998 78998888887543
No 91
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=27.74 E-value=1.2e+02 Score=29.48 Aligned_cols=103 Identities=14% Similarity=0.160 Sum_probs=60.4
Q ss_pred eEEEEcCCCCccccCCCCCchhhccC--CeEEeCCEEEEEeeCC----CCeE-------EEEcc--cCC-------CccC
Q 047972 67 YKFNVGGKNGLWVVKPYENYNHWAER--MRFQVNDSLYFKYKKG----SDSV-------LVVTK--DDY-------FSCN 124 (273)
Q Consensus 67 ~~y~VGg~~G~W~~~P~~~Yt~WAs~--ktF~VGDtLvF~y~~~----~HsV-------vqVtk--~dY-------d~C~ 124 (273)
.++..+...+.|.++ +..|..|... .+++.|++.++.+.+. .|.+ ..+.+ ..+ +. .
T Consensus 350 ~~~~~~~~~~~w~iN-G~~f~~~~~p~l~~v~~G~~~~w~i~N~~~~~~HP~HLHG~~F~Vl~~~~g~~~~~~~~~~~-~ 427 (534)
T 3abg_A 350 RQFRFGRTGPTWTIN-GVAFADVQNRLLANVPVGTVERWELINAGNGWTHPIHIHLVDFKVISRTSGNNARTVMPYES-G 427 (534)
T ss_dssp EEEECSCCCSTTCCC-CBTTBCTTSCCCCEECTTCEEEEEEEECSSSCCCCEEESSCCEEEEEESSCCSSSCCCSGGG-S
T ss_pred eEEEEeccCceeEEC-CcccCCCCCcceeeccCCCEEEEEEEcCCCCCCcCEEECCeeEEEEEEcCCCCcCcCCcccc-C
Confidence 455555444459886 3456666433 4678899888766541 3433 23333 111 11 1
Q ss_pred CCCCCcccCCCCeEEE---ecCcccEEEEeCCCCCCCCCCeEEEEEeecC
Q 047972 125 NKKPVQSLTDGESVFS---FDHSGPYFFISGNADNCNKGQKLIVVVMAVR 171 (273)
Q Consensus 125 ~s~pi~~~ssG~t~V~---L~~pG~~YFICgv~gHC~~GMKlaI~V~a~~ 171 (273)
..+.+.....+...|. -+.+|.+.|=|-+..|=..||-..+.|....
T Consensus 428 ~rDTV~v~pg~~v~I~~~~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 477 (534)
T 3abg_A 428 LKDVVWLGRRETVVVEAHYAPFPGVYMFHCHNLIHEDHDMMAAFNATVLP 477 (534)
T ss_dssp CBSEECCCSSEEEEEEEECCSCCEEEEEEESCHHHHHTTCEEEEEECSSC
T ss_pred CcCeEEcCCCCEEEEEEEECCCCccEEEecChHHHHhcCCceEEEEEecc
Confidence 1111112122333333 3579999999999999999999999998655
No 92
>2vb2_X Copper protein, cation efflux system protein CUSF; cation PI, metal-binding, metal transport, copper tolerance, transport; 1.70A {Escherichia coli} PDB: 2vb3_X
Probab=27.42 E-value=29 Score=26.19 Aligned_cols=21 Identities=10% Similarity=0.229 Sum_probs=16.2
Q ss_pred hhccCCeEEeCCEEEEEeeCC
Q 047972 88 HWAERMRFQVNDSLYFKYKKG 108 (273)
Q Consensus 88 ~WAs~ktF~VGDtLvF~y~~~ 108 (273)
+.+.-..+++||.|.|.|...
T Consensus 55 ~~~~l~~lk~Gd~V~F~~~~~ 75 (88)
T 2vb2_X 55 PQTKMSEIKTGDKVAFNFVQQ 75 (88)
T ss_dssp TTCEECCCCTTCEEEEEEEEE
T ss_pred ChhhhhcCCCCCEEEEEEEEe
Confidence 344446899999999999863
No 93
>3iot_A Maltose-binding protein, huntingtin fusion protei; HTT-EX1, HD, sugar transport, transport, apoptos disease mutation, nucleus; 3.50A {Escherichia coli k-12} PDB: 3io6_A 3io4_A 3ior_A 3iou_A 3iov_A 3iow_A
Probab=27.41 E-value=13 Score=34.06 Aligned_cols=9 Identities=33% Similarity=0.582 Sum_probs=0.0
Q ss_pred CCCCCcccc
Q 047972 245 SGSSGLGCN 253 (273)
Q Consensus 245 ~~a~g~~~~ 253 (273)
+|..|..+.
T Consensus 437 ~~~~~~~~~ 445 (449)
T 3iot_A 437 AGKLGTGRR 445 (449)
T ss_dssp ---------
T ss_pred CCccccCcc
Confidence 555555543
No 94
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=27.34 E-value=32 Score=32.48 Aligned_cols=72 Identities=13% Similarity=0.145 Sum_probs=46.9
Q ss_pred CeEEeCCEEEEEeeCC---CCeEEE----Ecc--cCCCccCCCCCCcccCCCCe---EEEecC-cccEEEEeCCC----C
Q 047972 93 MRFQVNDSLYFKYKKG---SDSVLV----VTK--DDYFSCNNKKPVQSLTDGES---VFSFDH-SGPYFFISGNA----D 155 (273)
Q Consensus 93 ktF~VGDtLvF~y~~~---~HsVvq----Vtk--~dYd~C~~s~pi~~~ssG~t---~V~L~~-pG~~YFICgv~----g 155 (273)
.+++.||+|+.++.++ .++|.. +.. ++...|- ..-|.+ .+++++ +|+|||=|-.. .
T Consensus 52 i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~~~DG~~~~~-------i~PG~~~~Y~f~~~~~~GT~wYH~H~~~~t~~ 124 (451)
T 2uxt_A 52 IRVWKGDDVKLIYSNRLTENVSMTVAGLQVPGPLMGGPARM-------MSPNADWAPVLPIRQNAATLWYHANTPNRTAQ 124 (451)
T ss_dssp EEEETTCEEEEEEEECSSSCBCEEEETCCCCGGGSCSGGGC-------BCTTCEECCEEECCSCSEEEEEEECCTTTHHH
T ss_pred EEEeCCCEEEEEEEECCCCCccEEECCccCCCCCCCCCcCc-------CCCCCeEEEEEEcCCCCcceEEecCCCCchhh
Confidence 3789999999999864 244422 111 1111232 223443 788886 99999999873 3
Q ss_pred CCCCCCeEEEEEeecC
Q 047972 156 NCNKGQKLIVVVMAVR 171 (273)
Q Consensus 156 HC~~GMKlaI~V~a~~ 171 (273)
|=..||-..+.|....
T Consensus 125 q~~~Gl~G~liV~~~~ 140 (451)
T 2uxt_A 125 QVYNGLAGMWLVEDEV 140 (451)
T ss_dssp HHHTTCEEEEEEECHH
T ss_pred hHhhcceEEEEEecCc
Confidence 5568999999998654
No 95
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=25.97 E-value=1.1e+02 Score=27.19 Aligned_cols=78 Identities=10% Similarity=0.093 Sum_probs=0.0
Q ss_pred eEEeCCEEEEEeeCCC--------CeEEEEcccCCCccCCCCCCcccCCCCeEEEecCc-------------ccEEEEeC
Q 047972 94 RFQVNDSLYFKYKKGS--------DSVLVVTKDDYFSCNNKKPVQSLTDGESVFSFDHS-------------GPYFFISG 152 (273)
Q Consensus 94 tF~VGDtLvF~y~~~~--------HsVvqVtk~dYd~C~~s~pi~~~ssG~t~V~L~~p-------------G~~YFICg 152 (273)
++++||+|+.++.+.. |.+.+-...|=.. ....++.--.+=.-.++++.| |+|||-|-
T Consensus 45 ~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~dG~~-~~~~~i~PG~~~~Y~~~~~~P~~~~~~~~~~~~~gt~~YH~h 123 (313)
T 3tas_A 45 ELNEGDTLHIEFENTMDVPVSLHVHGLDYEISSDGTK-QSRSDVEPGGTRTYTWRTHVPGRRADGTWRAGSAGYWHYHDH 123 (313)
T ss_dssp EEETTCEEEEEEEECSSSCBCCEESSSBCCGGGSCST-TTTCCBCTTCEEEEEEBCCCCEECTTSCEECCSCEEEEEECS
T ss_pred EEECCCEEEEEEEECCCCCccEeecCCcCCccCCCCc-cccCCcCCCCEEEEEEEeccCCccccccccCCCceEEEEeec
Q ss_pred CCCCCC------CCCeEEEEEeecCC
Q 047972 153 NADNCN------KGQKLIVVVMAVRN 172 (273)
Q Consensus 153 v~gHC~------~GMKlaI~V~a~~~ 172 (273)
+.+.=+ .||-..+.|.....
T Consensus 124 ~~~~~~~~~~~~~Gl~G~liV~~~~~ 149 (313)
T 3tas_A 124 VVGTEHGTGGIRNGLYGPVIVRRKGD 149 (313)
T ss_dssp SSSSTTCHHHHHHTCEEEEEEECTTC
T ss_pred CcccccchhhhhccccCceEeecccc
No 96
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=25.69 E-value=60 Score=28.98 Aligned_cols=34 Identities=18% Similarity=0.267 Sum_probs=28.0
Q ss_pred EEEecCcccEEEEeCCCC-CCCCCCeEEEEEeecC
Q 047972 138 VFSFDHSGPYFFISGNAD-NCNKGQKLIVVVMAVR 171 (273)
Q Consensus 138 ~V~L~~pG~~YFICgv~g-HC~~GMKlaI~V~a~~ 171 (273)
.|..+.+|.|+|.|.... |=..||...+.|....
T Consensus 292 ~v~~~~pG~y~~~~h~~~~h~~~Gm~~~~~V~~~~ 326 (340)
T 2bw4_A 292 FYTFRQPGVYAYVNHNLIEAFELGAAGHFKVTGEW 326 (340)
T ss_dssp EEECCSCEEEEEEESSHHHHHTTSCEEEEEEESCC
T ss_pred EEECCCCeeeEEEcCchHHHHhCCCEEEEEECCCC
Confidence 577788999999999873 6588999999998644
No 97
>1ac0_A Glucoamylase; hydrolase, starch binding domain; HET: GLC BGC GLO; NMR {Aspergillus niger} SCOP: b.3.1.1 PDB: 1acz_A* 1kul_A 1kum_A
Probab=25.53 E-value=14 Score=28.18 Aligned_cols=40 Identities=20% Similarity=0.448 Sum_probs=28.2
Q ss_pred eEEEEcCC--CCccccCC-----CCCc----hhhccCCeEEeCCEEEEEee
Q 047972 67 YKFNVGGK--NGLWVVKP-----YENY----NHWAERMRFQVNDSLYFKYK 106 (273)
Q Consensus 67 ~~y~VGg~--~G~W~~~P-----~~~Y----t~WAs~ktF~VGDtLvF~y~ 106 (273)
..|+||+. .|.|+... ..+| ..|.....+..|..++|||-
T Consensus 22 ~v~vvGs~~~LG~W~~~~a~~l~~~~~~~~~~~W~~~v~lp~~~~~eYKy~ 72 (108)
T 1ac0_A 22 NIYLVGSISQLGDWETSDGIALSADKYTSSDPLWYVTVTLPAGESFEYKFI 72 (108)
T ss_dssp CEECCCSSSTTCSSSGGGSCCBBCSSSSSSCSSCEEEECCCSSSCEECCCE
T ss_pred EEEEEeCcHHHCCCCHHHCccccccccCCcCCeEEEEEEeCCCCeEEEEEE
Confidence 45788873 46697431 1333 78988888888888999985
No 98
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=25.34 E-value=74 Score=27.77 Aligned_cols=76 Identities=12% Similarity=0.131 Sum_probs=43.7
Q ss_pred CeEEeCCEEEEEeeCCC---CeEEE----EcccCCCccCCCCCCcccCCCCe---EEEecC-------------cccEEE
Q 047972 93 MRFQVNDSLYFKYKKGS---DSVLV----VTKDDYFSCNNKKPVQSLTDGES---VFSFDH-------------SGPYFF 149 (273)
Q Consensus 93 ktF~VGDtLvF~y~~~~---HsVvq----Vtk~dYd~C~~s~pi~~~ssG~t---~V~L~~-------------pG~~YF 149 (273)
.+++.||+|+.++.+.. ++|.. +.. ..|.-..+ .....-|.+ .+++++ .|++||
T Consensus 38 i~~~~Gd~v~v~~~N~~~~~~siH~HG~~~~~-~~DG~~~t--~~~i~pG~~~~Y~f~~~~~~~~~~g~~~~~~~gt~~Y 114 (276)
T 3kw8_A 38 IEVNEGDTLHIEFTNTMDVRASLHVHGLDYEI-SSDGTAMN--KSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHY 114 (276)
T ss_dssp EEEETTCEEEEEEEECSSSCBCCEESSSBCCG-GGSCCTTT--TCSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEE
T ss_pred EEEECCCEEEEEEEECCCCCccEeecCcccCC-ccCCCcCC--cCCCCCCCEEEEEEEcCCccccccCccCCCCCEEEEE
Confidence 37899999999988642 23321 111 11110000 011223443 566654 488989
Q ss_pred EeCCCC------CCCCCCeEEEEEeecC
Q 047972 150 ISGNAD------NCNKGQKLIVVVMAVR 171 (273)
Q Consensus 150 ICgv~g------HC~~GMKlaI~V~a~~ 171 (273)
-|-..+ |=..||-..+.|....
T Consensus 115 H~h~~~~~~~~~~~~~Gl~G~liV~~~~ 142 (276)
T 3kw8_A 115 HDHVVGTEHGTGGIRNGLYGPVIVRRKG 142 (276)
T ss_dssp ECSSSSSTTCHHHHHHTCEEEEEEECTT
T ss_pred ecCccccccchhhhhCccEEEEEEecCC
Confidence 998754 3456999999998654
No 99
>4he6_A Peptidase family U32; ultra-tight crystal packing, unknown function; 1.10A {Geobacillus thermoleovorans} PDB: 4he5_A
Probab=25.16 E-value=39 Score=24.88 Aligned_cols=18 Identities=22% Similarity=0.218 Sum_probs=14.4
Q ss_pred cCCeEEeCCEEEEEeeCC
Q 047972 91 ERMRFQVNDSLYFKYKKG 108 (273)
Q Consensus 91 s~ktF~VGDtLvF~y~~~ 108 (273)
.+++|.+||.|+|--..+
T Consensus 26 ~rN~f~~GD~iEi~~P~g 43 (89)
T 4he6_A 26 QRNHFRPGDEVEFFGPEI 43 (89)
T ss_dssp ESSCBCTTCEEEEESTTS
T ss_pred EcCCcCCCCEEEEEcCCC
Confidence 477999999999875544
No 100
>2kbn_A Conserved protein; nucleic acid binding protein, beta barrel, structural genomics, PSI-2, protein structure initiative; NMR {Methanosarcina mazei} PDB: 2ken_A
Probab=24.77 E-value=46 Score=25.55 Aligned_cols=31 Identities=16% Similarity=0.370 Sum_probs=24.2
Q ss_pred EEEEcCCCCccccCCCCCchhhc--cCCeEEeCCEEEEE
Q 047972 68 KFNVGGKNGLWVVKPYENYNHWA--ERMRFQVNDSLYFK 104 (273)
Q Consensus 68 ~y~VGg~~G~W~~~P~~~Yt~WA--s~ktF~VGDtLvF~ 104 (273)
..++||..| + ..++.|. ....|+.||+|.++
T Consensus 38 ~~~l~DeTG--~----I~~t~W~~~~~~~~~~G~~V~i~ 70 (109)
T 2kbn_A 38 VGLLGDETG--I----IKFTIWKNAELPLLEQGESYLLR 70 (109)
T ss_dssp EEEEECTTC--C----EEEEEEGGGCCCCCCTTCEEEEE
T ss_pred EEEEECCCC--e----EEEEEECcccccccCCCCEEEEE
Confidence 467999888 3 4578898 33589999999988
No 101
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=23.64 E-value=32 Score=32.50 Aligned_cols=72 Identities=24% Similarity=0.275 Sum_probs=45.9
Q ss_pred CeEEeCCEEEEEeeCC---CCeEEE----Ec--ccCCCccCCCCCCcccCCCCe---EEEec-CcccEEEEeCC----CC
Q 047972 93 MRFQVNDSLYFKYKKG---SDSVLV----VT--KDDYFSCNNKKPVQSLTDGES---VFSFD-HSGPYFFISGN----AD 155 (273)
Q Consensus 93 ktF~VGDtLvF~y~~~---~HsVvq----Vt--k~dYd~C~~s~pi~~~ssG~t---~V~L~-~pG~~YFICgv----~g 155 (273)
.+++.||+|+.++.++ .++|.. +. .++...|- ..-|.+ .++++ .+|+|||=|-. ..
T Consensus 40 i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~~~DG~~~~~-------i~PG~~~~Y~f~~~~~~GT~wYH~H~~~~~~~ 112 (448)
T 3aw5_A 40 IILRRGQRVDMTLKNKLTEPTIVHWHGFDVNWHNDAHPSFA-------ITPGESYNYSFDVVNRAGTYLYHPHPHGLTAK 112 (448)
T ss_dssp EEEETTCEEEEEEEECSSSCBCEEEETCCCCHHHHTCGGGC-------BCTTCEEEEEEECCSCSEEEEEEECCTTTHHH
T ss_pred EEEeCCCEEEEEEEECCCCceeEEeCCccCCCccCCCCCcc-------CCCCCEEEEEEEcCCCCCceEeccCCCCchHH
Confidence 4689999999999864 233322 11 11111132 223443 67777 79999999983 34
Q ss_pred CCCCCCeEEEEEeecC
Q 047972 156 NCNKGQKLIVVVMAVR 171 (273)
Q Consensus 156 HC~~GMKlaI~V~a~~ 171 (273)
|-..||-..+.|....
T Consensus 113 q~~~Gl~G~liV~~~~ 128 (448)
T 3aw5_A 113 QFYMGQLGLVIVEDSG 128 (448)
T ss_dssp HHHTTCCEEEEEECTT
T ss_pred HHhccceEEEEEeCCc
Confidence 4558999999998654
No 102
>2l55_A SILB,silver efflux protein, MFP component of the components proton antiporter metal...; APO form, AG(I)-binding site; NMR {Cupriavidus metallidurans}
Probab=23.45 E-value=40 Score=25.11 Aligned_cols=21 Identities=10% Similarity=0.202 Sum_probs=16.2
Q ss_pred hccCCeEEeCCEEEEEeeCCC
Q 047972 89 WAERMRFQVNDSLYFKYKKGS 109 (273)
Q Consensus 89 WAs~ktF~VGDtLvF~y~~~~ 109 (273)
.+.-..+++||.|.|.+....
T Consensus 42 ~~~l~~lk~Gd~V~F~~~~~~ 62 (82)
T 2l55_A 42 AGLPQGLKAGDRVAFSFRLDP 62 (82)
T ss_dssp TCCCSSCSTTCEEEEEEEEET
T ss_pred hhHhhcCCCCCEEEEEEEECC
Confidence 334457999999999998643
No 103
>2k75_A Uncharacterized protein TA0387; closed beta barrel, OB fold, structural genomics, PSI-2, protein structure initiative; NMR {Thermoplasma acidophilum}
Probab=21.98 E-value=33 Score=26.33 Aligned_cols=29 Identities=7% Similarity=0.107 Sum_probs=23.9
Q ss_pred EEEEcCCCCccccCCCCCchhhccCCeEEeCCEEEEE
Q 047972 68 KFNVGGKNGLWVVKPYENYNHWAERMRFQVNDSLYFK 104 (273)
Q Consensus 68 ~y~VGg~~G~W~~~P~~~Yt~WAs~ktF~VGDtLvF~ 104 (273)
+.+|||..| . ..++.|-.. |+.||.|.++
T Consensus 41 ~~~l~DeTG--~----I~~tlW~~~--l~~Gdvv~i~ 69 (106)
T 2k75_A 41 QGYIEDDTA--R----IRISSFGKQ--LQDSDVVRID 69 (106)
T ss_dssp EEEEECSSC--E----EEEEEESSC--CCTTEEEEEE
T ss_pred EEEEEcCCC--e----EEEEEEcCc--cCCCCEEEEE
Confidence 467999888 3 457899887 9999999988
No 104
>1xne_A Hypothetical protein PF0469; GFT structural genomics, protein structure initiative, NESG, PFR14, alpha and beta protein; NMR {Pyrococcus furiosus} SCOP: b.122.1.6
Probab=21.88 E-value=23 Score=28.25 Aligned_cols=12 Identities=17% Similarity=0.387 Sum_probs=10.3
Q ss_pred CeEEeCCEEEEE
Q 047972 93 MRFQVNDSLYFK 104 (273)
Q Consensus 93 ktF~VGDtLvF~ 104 (273)
+.+++||+|+|+
T Consensus 33 ~~i~vGD~I~f~ 44 (113)
T 1xne_A 33 KDIKRGDKIIFN 44 (113)
T ss_dssp TTCCTTCEEEET
T ss_pred hccCCCCEEEEc
Confidence 468999999995
No 105
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=21.25 E-value=91 Score=31.69 Aligned_cols=76 Identities=13% Similarity=0.104 Sum_probs=48.0
Q ss_pred CCeEEeCCEEEEEeeCC-----CCeE------EEEcccCCCccCCCCCCcccCCCCeEEEecCcccEEEEeCCCCCCCCC
Q 047972 92 RMRFQVNDSLYFKYKKG-----SDSV------LVVTKDDYFSCNNKKPVQSLTDGESVFSFDHSGPYFFISGNADNCNKG 160 (273)
Q Consensus 92 ~ktF~VGDtLvF~y~~~-----~HsV------vqVtk~dYd~C~~s~pi~~~ssG~t~V~L~~pG~~YFICgv~gHC~~G 160 (273)
..+++.||++.+..-+. .|.+ ++|....-|.+. +.-...-...++.+.+|.++|-|-+..|=..|
T Consensus 245 ~l~v~~Ge~vrlrliN~g~~~~~h~~hlhGh~f~Vvg~~~Dtv~----v~Pg~~~~v~~~~~~pG~w~~hCH~~~H~~~G 320 (742)
T 2r7e_A 245 GLIGCHRKSVYWHVIGMGTTPEVHSIFLEGHTFLVRNHRQASLE----ISPITFLTAQTLLMDLGQFLLFCHISSHQHDG 320 (742)
T ss_dssp CCEECSSSCEEEECCCCCSSSCCCCCCCTTCCCEETTEECCSCC----CCTTCCCEEEECCCSCSEECCCCCSSSSSTTS
T ss_pred ceEEcCCCEEEEEEEeCCCCCcceEEEECCCEEEEEeEecceEE----eCCCcEEEEEEEeCCCeeEEEEeCChhHHhCC
Confidence 35789999999987642 2444 223211111111 11111112356678899999999999999999
Q ss_pred CeEEEEEeecC
Q 047972 161 QKLIVVVMAVR 171 (273)
Q Consensus 161 MKlaI~V~a~~ 171 (273)
|.-.+.|....
T Consensus 321 M~~~~~V~~~~ 331 (742)
T 2r7e_A 321 MEAYVKVDSCP 331 (742)
T ss_dssp CCBCEEECCCC
T ss_pred CeEEEEEecCC
Confidence 99888887654
No 106
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=20.45 E-value=12 Score=38.47 Aligned_cols=73 Identities=10% Similarity=0.076 Sum_probs=46.6
Q ss_pred CCeEEeCCEEEEEeeCC-----CCeEE------EE-cccCCCccCCCCCCcccCCCCe--EEEecCcccEEEEeCCCCCC
Q 047972 92 RMRFQVNDSLYFKYKKG-----SDSVL------VV-TKDDYFSCNNKKPVQSLTDGES--VFSFDHSGPYFFISGNADNC 157 (273)
Q Consensus 92 ~ktF~VGDtLvF~y~~~-----~HsVv------qV-tk~dYd~C~~s~pi~~~ssG~t--~V~L~~pG~~YFICgv~gHC 157 (273)
..+++.||++.+.+.+. .|.+. +| ..+.+ ..+.+...-.+.. .++.+.+|.+.|.|-+..|-
T Consensus 369 ~l~v~~Ge~vr~rliN~g~~~~~H~fHlhGh~f~Vv~~dg~----~~Dtv~l~Pg~~~~v~~~ad~pG~w~~hcH~~~H~ 444 (770)
T 2r7e_B 369 GLVMAQDQRIRWYLLSMGSNENIHSIHFSGHVFTVRKKEEY----KMALYNLYPGVFETVEMLPSKAGIWRVECLIGEHL 444 (770)
T ss_dssp CCCCCSSSCEEEECCCCCSSSCCCEEEBSSCCEECCSSSCC----EESEEECCTTCCCEEEECCSSCBCCCBCCCSHHHH
T ss_pred CeEEeCCCEEEEEEEeCCCCcceEEEEEcCCEEEEEecCCc----eeeEEEECCCeEEEEEEEeCCCCceEEEecccccc
Confidence 35789999999988752 35442 22 11111 0111112222222 55667899999999999999
Q ss_pred CCCCeEEEEEe
Q 047972 158 NKGQKLIVVVM 168 (273)
Q Consensus 158 ~~GMKlaI~V~ 168 (273)
..||...+.|.
T Consensus 445 ~~GM~~~~~V~ 455 (770)
T 2r7e_B 445 HAGMSTLFLVY 455 (770)
T ss_dssp TTBCCCCCCBC
T ss_pred ccccccccccc
Confidence 99999988885
No 107
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=20.32 E-value=62 Score=33.16 Aligned_cols=76 Identities=11% Similarity=0.188 Sum_probs=45.3
Q ss_pred CeEEeCCEEEEEeeCCC--------CeEEEEcccCCCccCCCCCCcccCCCCe---EEEec----------CcccEEEEe
Q 047972 93 MRFQVNDSLYFKYKKGS--------DSVLVVTKDDYFSCNNKKPVQSLTDGES---VFSFD----------HSGPYFFIS 151 (273)
Q Consensus 93 ktF~VGDtLvF~y~~~~--------HsVvqVtk~dYd~C~~s~pi~~~ssG~t---~V~L~----------~pG~~YFIC 151 (273)
.++++||+|+.++.+.. |.+.+ .....|.= .+......-|.+ .+++. ..|++||-|
T Consensus 201 Ir~~~GD~v~v~~~N~l~~~~siH~HG~~~-~~~~~dG~--~~~~~~I~PG~~~tY~f~~~~~~gp~~~d~~~Gt~wYHs 277 (770)
T 2r7e_B 201 IRAEVEDNIMVTFRNQASRPYSFYSSLISY-EEDQRQGA--EPRKNFVKPNETKTYFWKVQHHMAPTKDEFDCKAWAYSS 277 (770)
T ss_dssp CCCCSSSCEEEEEECCSSSCCCCCBTTCCC-CCCSSSCT--TTTSSCCCSSCEEEEECCCCSSSSCCSSCCSEEEEEECC
T ss_pred EEEEcCCEEEEEEEECCCCCcceeeccccc-ccccCCCC--cCccCccCCCCeEEEEEEecCccCCccCCCCCeeEEeec
Confidence 46789999999888642 22222 11111100 001111223443 45555 679999999
Q ss_pred CCCC--CCCCCCeEEEEEeecC
Q 047972 152 GNAD--NCNKGQKLIVVVMAVR 171 (273)
Q Consensus 152 gv~g--HC~~GMKlaI~V~a~~ 171 (273)
.+.. |...||...+.|....
T Consensus 278 h~~~~~q~~~GL~G~liV~~~~ 299 (770)
T 2r7e_B 278 DVDLEKDVHSGLIGPLLVCHTN 299 (770)
T ss_dssp CSSSSHHHHTSCCEEEEEECST
T ss_pred cCCcHHHHhCCceeeEEECCCc
Confidence 8865 6778999999998654
No 108
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=20.22 E-value=47 Score=32.69 Aligned_cols=32 Identities=6% Similarity=0.115 Sum_probs=28.8
Q ss_pred EEEecCcccEEEEeCCCCCCCCCCeEEEEEee
Q 047972 138 VFSFDHSGPYFFISGNADNCNKGQKLIVVVMA 169 (273)
Q Consensus 138 ~V~L~~pG~~YFICgv~gHC~~GMKlaI~V~a 169 (273)
.|..+.+|.+.|-|-+..|-..||...+.|..
T Consensus 296 ~~~~~~pG~w~~hch~~~h~~~Gm~~~~~V~~ 327 (647)
T 1sdd_B 296 EMKASKPGWWLLDTEVGEIQRAGMQTPFLIVD 327 (647)
T ss_dssp EEECCSSEEEEEECCCHHHHTTTCEEEEEEEC
T ss_pred EEEeccceEeecccCcccccccccccceeeec
Confidence 56778899999999999999999999999974
Done!