Query         047974
Match_columns 497
No_of_seqs    194 out of 2172
Neff          11.2
Searched_HMMs 46136
Date          Fri Mar 29 05:04:23 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047974.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/047974hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0156 Cytochrome P450 CYP2 s 100.0 1.1E-79 2.4E-84  581.9  40.4  440   25-490    25-488 (489)
  2 PLN02169 fatty acid (omega-1)- 100.0 3.6E-77 7.8E-82  581.5  47.2  449   26-489    31-499 (500)
  3 KOG0158 Cytochrome P450 CYP3/C 100.0 1.9E-77 4.1E-82  557.1  39.5  444   25-490    30-499 (499)
  4 KOG0157 Cytochrome P450 CYP4/C 100.0 2.9E-76 6.3E-81  571.2  42.2  447   26-490    35-496 (497)
  5 PLN03195 fatty acid omega-hydr 100.0 2.3E-75 4.9E-80  574.8  45.9  458   25-490    29-516 (516)
  6 PLN02971 tryptophan N-hydroxyl 100.0 2.8E-74   6E-79  567.7  42.4  446   26-489    57-533 (543)
  7 PLN02290 cytokinin trans-hydro 100.0   1E-73 2.2E-78  563.6  43.8  438   26-490    42-515 (516)
  8 PLN02500 cytochrome P450 90B1  100.0 2.6E-73 5.6E-78  556.6  39.8  438   26-488    38-488 (490)
  9 PLN03234 cytochrome P450 83B1; 100.0 1.4E-72   3E-77  553.7  42.0  442   26-489    28-498 (499)
 10 PTZ00404 cytochrome P450; Prov 100.0   7E-73 1.5E-77  553.4  39.8  433   27-489    30-482 (482)
 11 KOG0159 Cytochrome P450 CYP11/ 100.0 5.8E-72 1.3E-76  507.6  41.6  442   29-491    53-519 (519)
 12 PLN02183 ferulate 5-hydroxylas 100.0 1.8E-72 3.8E-77  553.2  41.4  441   26-489    36-511 (516)
 13 PLN02687 flavonoid 3'-monooxyg 100.0 4.4E-72 9.6E-77  550.5  43.0  443   27-490    35-509 (517)
 14 PLN03112 cytochrome P450 famil 100.0 5.3E-72 1.1E-76  551.1  42.9  471    3-491     3-509 (514)
 15 PLN00110 flavonoid 3',5'-hydro 100.0 5.2E-72 1.1E-76  546.5  42.3  444   25-490    30-497 (504)
 16 PLN00168 Cytochrome P450; Prov 100.0 3.3E-71 7.3E-76  544.5  45.5  450   26-491    35-518 (519)
 17 PLN02774 brassinosteroid-6-oxi 100.0 3.7E-72 8.1E-77  543.9  38.0  426   26-488    31-462 (463)
 18 PLN02394 trans-cinnamate 4-mon 100.0 4.7E-71   1E-75  543.4  44.3  446   26-490    30-502 (503)
 19 PLN02966 cytochrome P450 83A1  100.0 7.7E-71 1.7E-75  540.2  42.3  444   25-490    28-498 (502)
 20 PLN02936 epsilon-ring hydroxyl 100.0 1.1E-69 2.3E-74  529.4  46.8  448   26-492    12-484 (489)
 21 PLN02426 cytochrome P450, fami 100.0 9.4E-70   2E-74  528.5  46.0  431   33-491    48-501 (502)
 22 PLN03141 3-epi-6-deoxocathaste 100.0 1.5E-70 3.2E-75  531.6  39.6  439   24-491     5-451 (452)
 23 PLN02655 ent-kaurene oxidase   100.0 1.5E-69 3.2E-74  526.2  43.2  437   28-491     1-465 (466)
 24 PLN02196 abscisic acid 8'-hydr 100.0 2.1E-70 4.6E-75  531.1  37.1  421   27-489    36-462 (463)
 25 PLN02738 carotene beta-ring hy 100.0 3.8E-69 8.2E-74  532.1  44.8  423   48-491   151-596 (633)
 26 PF00067 p450:  Cytochrome P450 100.0   7E-71 1.5E-75  542.0  31.8  437   28-486     1-463 (463)
 27 PLN03018 homomethionine N-hydr 100.0 1.5E-68 3.2E-73  522.8  47.8  447   27-490    41-524 (534)
 28 PLN02987 Cytochrome P450, fami 100.0 1.4E-69 2.9E-74  523.3  39.8  432   27-491    31-470 (472)
 29 PLN02302 ent-kaurenoic acid ox 100.0 9.6E-69 2.1E-73  527.0  39.4  437   26-491    42-489 (490)
 30 KOG0684 Cytochrome P450 [Secon 100.0 2.2E-69 4.8E-74  478.1  30.7  438   27-490    32-485 (486)
 31 PLN02648 allene oxide synthase 100.0 2.2E-59 4.8E-64  448.4  30.4  412   26-466    17-463 (480)
 32 COG2124 CypX Cytochrome P450 [ 100.0 7.9E-54 1.7E-58  405.7  28.4  374   53-489    27-410 (411)
 33 PF12554 MOZART1:  Mitotic-spin  66.2      23  0.0005   21.8   4.6   42  280-321     6-47  (48)
 34 PF08492 SRP72:  SRP72 RNA-bind  53.3      10 0.00022   24.6   1.6    8  408-415    44-51  (59)
 35 PF09201 SRX:  SRX;  InterPro:   52.1      13 0.00028   28.7   2.2   24  435-458    18-41  (148)
 36 PF07886 BA14K:  BA14K-like pro  48.4      16 0.00035   20.1   1.7   16  423-438    16-31  (31)
 37 PF05952 ComX:  Bacillus compet  47.8      17 0.00038   23.3   2.0   24  302-325     4-27  (57)
 38 PF12508 DUF3714:  Protein of u  44.4     6.2 0.00014   33.2  -0.4   43  344-388    52-94  (200)
 39 COG2101 SPT15 TATA-box binding  42.6      19  0.0004   29.2   1.9   36  405-441    35-70  (185)
 40 KOG3506 40S ribosomal protein   34.4      18  0.0004   22.7   0.6   11  428-438    12-22  (56)
 41 cd04518 TBP_archaea archaeal T  26.8      42 0.00091   27.7   1.7   35  405-440    29-63  (174)
 42 TIGR03779 Bac_Flav_CT_M Bacter  24.2      17 0.00037   34.4  -1.1   43  344-389   255-298 (410)
 43 PF08285 DPM3:  Dolichol-phosph  23.4 1.1E+02  0.0025   22.0   3.2   29  297-325    53-81  (91)
 44 PF07849 DUF1641:  Protein of u  21.5 1.1E+02  0.0024   18.2   2.4   20  300-319    12-31  (42)
 45 PRK00394 transcription factor;  21.3      65  0.0014   26.8   1.8   34  405-439    28-61  (179)
 46 COG0851 MinE Septum formation   21.0 2.5E+02  0.0055   20.0   4.3   18  310-327    35-52  (88)
 47 cd00418 GlxRS_core catalytic c  20.7 1.9E+02  0.0042   25.2   4.6   55   26-92      5-59  (230)
 48 KOG3302 TATA-box binding prote  20.7      54  0.0012   27.2   1.2   57  405-462    50-117 (200)
 49 PF15396 FAM60A:  Protein Famil  20.3      67  0.0014   27.1   1.7   18   16-33     54-71  (213)
 50 TIGR03838 queuosine_YadB gluta  20.0 1.9E+02  0.0041   26.0   4.6   55   26-92      4-58  (272)

No 1  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.1e-79  Score=581.86  Aligned_cols=440  Identities=23%  Similarity=0.354  Sum_probs=352.7

Q ss_pred             hccCCCCCcccchhhHHHHhhccchHHHHHHHHHHHhCCeeEEeeecccCcceEEEcChhhHHHhhhcCCccccCCcccc
Q 047974           25 RKINPTPWNLPLLGMLASVILNINQLHDKVAQILEKTKGSFMIKGSWVAQYDMFLTSDPANVQHIMSTNFSKYHKGSEGR  104 (497)
Q Consensus        25 ~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~k~g~v~~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~~~~~~~~  104 (497)
                      +++||||++||++||++++...  .+|..+.++.++|||+|++   |+|..++|||+|++.++|++++++..|+.++...
T Consensus        25 ~~lPPGP~~lPiIGnl~~l~~~--~~h~~~~~ls~~yGpi~tl---~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~   99 (489)
T KOG0156|consen   25 RNLPPGPPPLPIIGNLHQLGSL--PPHRSFRKLSKKYGPVFTL---RLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPT   99 (489)
T ss_pred             CCCCcCCCCCCccccHHHcCCC--chhHHHHHHHHHhCCeEEE---EecCceEEEECCHHHHHHHHHhCCccccCCCCch
Confidence            5699999999999999999655  5899999999999999999   9999999999999999999999989999888621


Q ss_pred             -cccccc-CCcCeeec-CCchHHHHHHhhhcc-cCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHHHHHHH
Q 047974          105 -KRFDIF-GETGLFNS-DFDEWKHQRKLARAF-INHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLLKRTTF  180 (497)
Q Consensus       105 -~~~~~~-g~~~l~~~-~~~~w~~~R~~~~~~-f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~  180 (497)
                       ....+. |..++.++ +|+.|+.+||+.... ++...++..+... .++ .+.+++.+.+ ...+++||+.+.+..++.
T Consensus       100 ~~~~~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R-~~E-~~~l~~~l~~-~~~~~~vdl~~~l~~~~~  176 (489)
T KOG0156|consen  100 ATLKYLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIR-EEE-VDELVKKLSK-SKKGEPVDLSELLDLLVG  176 (489)
T ss_pred             hhHHHhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHH-HHH-HHHHHHHHHh-cCCCceeeHHHHHHHHHH
Confidence             222222 44488877 799999999999886 5666666665432 333 4566666665 222379999999999999


Q ss_pred             HHHHHhhcCCCCCCCCCCCCCCChHHHHHHHHHH----------H-HHHHH------HHHHHhHHHHHHHHHHHHHHHHH
Q 047974          181 DFACLIATGHNPNSLSVGFPEMGFPDAVDDACEA----------I-LIRHL------EKKLANGWRTIDQFWEKQKSMKQ  243 (497)
Q Consensus       181 ~v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~----------~-~~~~~------~~~~~~~~~~~~~~~~~~i~~~~  243 (497)
                      +++++++||.++...+.+ ....+.+.+......          + +++++      .+.......++.+++++.|++++
T Consensus       177 nvI~~~~fG~rf~~~~~~-~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh~  255 (489)
T KOG0156|consen  177 NVICRMLFGRRFEEEDEE-EFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIIDEHR  255 (489)
T ss_pred             HHHHHHHhCCccccCCch-HHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999998764211 112233333332211          1 12222      34445555568999999999998


Q ss_pred             HHHHhccccccccchhhHHHHHhcCCCCCCCC-CchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHH
Q 047974          244 EEIEKGMEAKEDEGIYSLLNCYLSGHEVTGPT-PAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELK  322 (497)
Q Consensus       244 ~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~-l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~  322 (497)
                      +.. ..     ++. .|+++.+++..+++... +++++|...+.++++||+|||++|+.|++.+|++||++|+|+++||+
T Consensus       256 ~~~-~~-----~~~-~D~vD~lL~~~~~~~~~~~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qeEId  328 (489)
T KOG0156|consen  256 EKI-GD-----EEG-RDFVDALLKLMKEEKAEGLTDDHLKALILDLFLAGTDTTATTLEWAMAELLNNPEVQKKLQEEID  328 (489)
T ss_pred             hhh-cc-----CCC-CcHHHHHHHhhcccccCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence            876 11     122 89999999986533222 89999999999999999999999999999999999999999999999


Q ss_pred             hhcccCCCCCCCCCChhhhhcchhHHHHHHHhhcCCCCCCccc-ccccCCCcccCCeeeCCCcEEEEeccccccCCCCCC
Q 047974          323 RNFSQEGFNKPPLVRLNELNKLVYLHAALCETLRLYPPVPFEI-RIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWG  401 (497)
Q Consensus       323 ~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~-r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g  401 (497)
                      +++|     .++.++.+|+.+||||+|+|+|++|++|++|+.. |.+++|+.+ +||.|||||.|+++.+++|+||++| 
T Consensus       329 ~vvG-----~~r~v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i-~Gy~IPkgT~v~vn~~ai~rDp~vw-  401 (489)
T KOG0156|consen  329 EVVG-----KGRLVSESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKI-GGYDIPKGTTVLVNLWAIHRDPKVW-  401 (489)
T ss_pred             HHhC-----CCCCCChhhhccCHHHHHHHHHHHhcCCCccccccccccCCeeE-cCEEcCCCCEEEEeehhhhcCCccC-
Confidence            9995     4555999999999999999999999999999875 555555555 9999999999999999999999999 


Q ss_pred             CCCCCCCCCCccCCCCCccCCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCc-cceeeeeEEEeecC
Q 047974          402 EDCREFKPERWITEDGRIRHEPPHKFFSFNAGPRICIGKDIAFTLMKATAASIIHNYDVQVVKNH-PVTYNLSIGFRMKH  480 (497)
Q Consensus       402 ~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~-~~~~~~~~~~~~~~  480 (497)
                      +||++|+||||++++ ..+. ....++|||.|+|+|||..+|++++.++++.|+++|+|++.++. +.... +.+...+.
T Consensus       402 ~dP~eF~PERFl~~~-d~~~-~~~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w~~~~~~~d~~e~-~~~~~~~~  478 (489)
T KOG0156|consen  402 EDPEEFKPERFLDSN-DGKG-LDFKLIPFGSGRRICPGEGLARAELFLFLANLLQRFDWKLPGGKVDMEEA-GLTLKKKK  478 (489)
T ss_pred             CCccccChhhhcCCc-cccC-CceEecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeeeecCCCCCCCccc-ccceecCC
Confidence            999999999999974 1122 56889999999999999999999999999999999999998762 22333 36667777


Q ss_pred             ceEEEEEecC
Q 047974          481 GLLARVSKRS  490 (497)
Q Consensus       481 ~~~~~~~~r~  490 (497)
                      ++.+..++|.
T Consensus       479 pl~~~~~~r~  488 (489)
T KOG0156|consen  479 PLKAVPVPRL  488 (489)
T ss_pred             cceeeeecCC
Confidence            7888777764


No 2  
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=3.6e-77  Score=581.53  Aligned_cols=449  Identities=41%  Similarity=0.746  Sum_probs=360.1

Q ss_pred             ccCCCCCcccchhhHHHHhhccchHHHHHHHHHHHhCCeeEEeeecccCcceEEEcChhhHHHhhhcCCccccCCccccc
Q 047974           26 KINPTPWNLPLLGMLASVILNINQLHDKVAQILEKTKGSFMIKGSWVAQYDMFLTSDPANVQHIMSTNFSKYHKGSEGRK  105 (497)
Q Consensus        26 ~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~k~g~v~~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~~~~~~~~~  105 (497)
                      +.-|||+++|++||+..+..+...+++++.+...+||..+.+.|+|+|+.++++|+||+.+++|+.++...|++++.+..
T Consensus        31 ~~~p~p~~~pl~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~~k~~~~~~  110 (500)
T PLN02169         31 HGQPILKNWPFLGMLPGMLHQIPRIYDWTVEVLEASNLTFYFKGPWLSGTDMLFTADPKNIHHILSSNFGNYPKGPEFKK  110 (500)
T ss_pred             CCCCCCCCCCcccchHHHHHccCcHHHHHHHHHHhCCCcEEEEeeccCCCCeEEEcCHHHHHHHHhhCcccCCCcHHHHH
Confidence            35579999999999988876655677888888788998888777799999999999999999999987777888765544


Q ss_pred             cccccCCcCeeecCCchHHHHHHhhhcccCHHHHHHHHH-HHhHHHHHhhHHHHhhhhcCCCceeeHHHHHHHHHHHHHH
Q 047974          106 RFDIFGETGLFNSDFDEWKHQRKLARAFINHQKFQQLMA-KIVPEMIERGLIPVLDHVSEEKMLVDFQDLLKRTTFDFAC  184 (497)
Q Consensus       106 ~~~~~g~~~l~~~~~~~w~~~R~~~~~~f~~~~l~~~~~-~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~v~~  184 (497)
                      ...+.|. |+++++|+.|+++||+++++|+..++..... ..+. ...+.+.+.+++...++..+|+.+.+.++++++++
T Consensus       111 ~~~~~g~-gl~~~~g~~Wr~~Rk~l~p~F~~~~~~~~~~~~~~~-~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~dvi~  188 (500)
T PLN02169        111 IFDVLGE-GILTVDFELWEDLRKSNHALFHNQDFIELSLSSNKS-KLKEGLVPFLDNAAHENIIIDLQDVFMRFMFDTSS  188 (500)
T ss_pred             HHHhhcC-cccccCcHHHHHHHHHHHHHhhhHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcCCeEeHHHHHHHHHHHHHH
Confidence            4456787 9999999999999999999999987765321 2232 33566667776554556789999999999999999


Q ss_pred             HhhcCCCCCCCCCCCCCCChHHHHHHHHHH-------HHH-----HHH----HHHHHhHHHHHHHHHHHHHHHHHHHHHh
Q 047974          185 LIATGHNPNSLSVGFPEMGFPDAVDDACEA-------ILI-----RHL----EKKLANGWRTIDQFWEKQKSMKQEEIEK  248 (497)
Q Consensus       185 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~-----~~~----~~~~~~~~~~~~~~~~~~i~~~~~~~~~  248 (497)
                      .++||.+.+..+.......+.+.+......       ++.     .++    .++..++.+.+.+++.+.|+++++....
T Consensus       189 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~~~  268 (500)
T PLN02169        189 ILMTGYDPMSLSIEMLEVEFGEAADIGEEAIYYRHFKPVILWRLQNWIGIGLERKMRTALATVNRMFAKIISSRRKEEIS  268 (500)
T ss_pred             hheeCCCccccCCCCCCCHHHHHHHHHHHHHHhHHhccHHHHHHHHHhCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            999999776443222223444444332211       110     111    2445678888999999999888764221


Q ss_pred             ccccccccchhhHHHHHhcCCCCC---CCCCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhhc
Q 047974          249 GMEAKEDEGIYSLLNCYLSGHEVT---GPTPAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRNF  325 (497)
Q Consensus       249 ~~~~~~~~~~~dll~~ll~~~~~~---~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~  325 (497)
                      ...  .+....|+++.+++....+   +..++++++.+++..+++||+|||+++++|++++|+.||++|+|+++||++++
T Consensus       269 ~~~--~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~l~AG~dTTa~tl~w~l~~La~~Pevq~kl~~Ei~~v~  346 (500)
T PLN02169        269 RAE--TEPYSKDALTYYMNVDTSKYKLLKPKKDKFIRDVIFSLVLAGRDTTSSALTWFFWLLSKHPQVMAKIRHEINTKF  346 (500)
T ss_pred             ccc--ccCCCcCHHHHHHhccccccccccCCChHHHHHHHHHHHHhchhHHHHHHHHHHHHHHCCHHHHHHHHHHHHhhC
Confidence            100  0012368999998764321   23478889999999999999999999999999999999999999999999764


Q ss_pred             ccCCCCCCCCCChhhhhcchhHHHHHHHhhcCCCCCCcccccccCCCcccCCeeeCCCcEEEEeccccccCCCCCCCCCC
Q 047974          326 SQEGFNKPPLVRLNELNKLVYLHAALCETLRLYPPVPFEIRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWGEDCR  405 (497)
Q Consensus       326 ~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~  405 (497)
                                 +.+++.+||||+|||+||||++|++|...|++.+|+++++||.|||||.|+++++++||||++||+||+
T Consensus       347 -----------~~~dl~~L~Yl~avi~EtLRl~P~vp~~~r~~~~d~~~~~G~~IpkGt~v~i~~~~ihrd~~~w~~dP~  415 (500)
T PLN02169        347 -----------DNEDLEKLVYLHAALSESMRLYPPLPFNHKAPAKPDVLPSGHKVDAESKIVICIYALGRMRSVWGEDAL  415 (500)
T ss_pred             -----------CHHHHhcCHHHHHHHHHHHhcCCCCCcCceecCCCCCccCCEEECCCCEEEEcHHHhhCCccccCCChh
Confidence                       578999999999999999999999999999998888887999999999999999999999999988999


Q ss_pred             CCCCCCccCCCCCccCCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCccceeeeeEEEeecCceEEE
Q 047974          406 EFKPERWITEDGRIRHEPPHKFFSFNAGPRICIGKDIAFTLMKATAASIIHNYDVQVVKNHPVTYNLSIGFRMKHGLLAR  485 (497)
Q Consensus       406 ~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~  485 (497)
                      +|+||||++++++....++..|+|||+|+|+|+|++||++|++++++.|+++|++++.++.+.....+.+++|+++++++
T Consensus       416 ~F~PeRfl~~~~~~~~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la~ll~~f~~~~~~~~~~~~~~~~~l~~~~gl~l~  495 (500)
T PLN02169        416 DFKPERWISDNGGLRHEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNYDFKVIEGHKIEAIPSILLRMKHGLKVT  495 (500)
T ss_pred             hcCccccCCCCCCccCCCCccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCEEEEcCCCCcccccceEEecCCCEEEE
Confidence            99999999765433323468899999999999999999999999999999999999987655545566788999999999


Q ss_pred             EEec
Q 047974          486 VSKR  489 (497)
Q Consensus       486 ~~~r  489 (497)
                      +++|
T Consensus       496 l~~~  499 (500)
T PLN02169        496 VTKK  499 (500)
T ss_pred             EEeC
Confidence            9987


No 3  
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.9e-77  Score=557.14  Aligned_cols=444  Identities=23%  Similarity=0.360  Sum_probs=352.5

Q ss_pred             hccCCCCCcccchhhHHHHhhccchHHHHHHHHHHHhCCeeEEeeecccCcceEEEcChhhHHHhhhcCCccccC--Ccc
Q 047974           25 RKINPTPWNLPLLGMLASVILNINQLHDKVAQILEKTKGSFMIKGSWVAQYDMFLTSDPANVQHIMSTNFSKYHK--GSE  102 (497)
Q Consensus        25 ~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~k~g~v~~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~~~--~~~  102 (497)
                      |+.-|+|+++|++||+..+...... ..+......++|+++-+   ..+.+|.++|+||+.|++|+.+++++|..  ++.
T Consensus        30 rrGi~~~~p~p~~Gn~~~~~~~~~~-~~~~~~~~~~~~~~~G~---y~~~~p~l~v~D~elik~I~ik~F~~F~~r~~~~  105 (499)
T KOG0158|consen   30 RRGIPGPKPLPFLGNLPGMLKRERP-GDLLLDIYTKYRPVVGI---YEGRQPALLVSDPELIKEILIKDFDNFYNRKRPI  105 (499)
T ss_pred             cCCCCCCCCCCcEecHHHHHhccCc-HHHHHHHHhcCCCEEEE---EecCCcceEecCHHHHHHHHHHhCccCcCCCCCC
Confidence            4467799999999999999765433 45555555566899888   99999999999999999999999999988  443


Q ss_pred             ccccc-cccCCcCeeecCCchHHHHHHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHHHHHHHH
Q 047974          103 GRKRF-DIFGETGLFNSDFDEWKHQRKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLLKRTTFD  181 (497)
Q Consensus       103 ~~~~~-~~~g~~~l~~~~~~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~  181 (497)
                      +..-. .+... +++..+|++|+++|..++++|++.+++++.+ .+++ +.+.+.+.+++....+..+++.+.+.+++.|
T Consensus       106 ~~d~~~~l~~~-~Lf~~~g~~WK~lR~~lsP~Fts~kmk~m~~-t~~~-~~~~l~~~l~~~~~~~~~~~~~dl~~~yT~D  182 (499)
T KOG0158|consen  106 YGDPEDPLSAL-NLFFLRGERWKRLRTKLSPTFTSGKLKKMFP-TMEE-VGDELVRHLRRKSEGGQEGEIKDLCARYTTD  182 (499)
T ss_pred             cCCCCCccccc-CchhccCchHHHHHHhhccccchhhHHHHHH-HHHH-HHHHHHHHHHHhhcccCCccHHHHHHHHHHH
Confidence            33332 22224 8999999999999999999999999999875 4444 4788888888755433678999999999999


Q ss_pred             HHHHhhcCCCCCCCCCCCCCCChHHHHHHHHHH----------HHHHHH--HH--HHHhHHHHHHHHHHHHHHHHHHHHH
Q 047974          182 FACLIATGHNPNSLSVGFPEMGFPDAVDDACEA----------ILIRHL--EK--KLANGWRTIDQFWEKQKSMKQEEIE  247 (497)
Q Consensus       182 v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~--~~--~~~~~~~~~~~~~~~~i~~~~~~~~  247 (497)
                      ||+.++||.+.++..+  ....|..........          ....+.  ..  ..........+++.+.+..+.+...
T Consensus       183 VI~~~AfG~~~~s~~d--~~~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~l~~~~~~~~~~~~~~~~v~~~v~~R~  260 (499)
T KOG0158|consen  183 VIGSCAFGLDANSLRD--PKAEFRRMGRRAFFLSRGLFPLKFMLIFLFPKLALPLRVKLFPEDVTDFFRKLVNSRVEQRE  260 (499)
T ss_pred             HHhHhhcccchhhhcC--chHHHHHhhHHHHHHhhccchHhHhHHHHhHHHHHhhhcccChHHHHHHHHHHHHHHHHHHH
Confidence            9999999998876653  222333222111111          011111  11  1233344555666666666655442


Q ss_pred             hccccccccchhhHHHHHhcCCCC--CC---C-CCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHH
Q 047974          248 KGMEAKEDEGIYSLLNCYLSGHEV--TG---P-TPAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREEL  321 (497)
Q Consensus       248 ~~~~~~~~~~~~dll~~ll~~~~~--~~---~-~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei  321 (497)
                      .+     .....|+++.+++...+  .+   . .+|.+||+++++.+++||.||||+++++++|+||.||++|+|||+||
T Consensus       261 ~~-----~~~r~Dfi~lll~~~~~~~~~~~~~~~lt~dei~aQafvFl~AGfeTts~tlsf~lYeLA~~PdvQ~kLreEI  335 (499)
T KOG0158|consen  261 KE-----NIERNDFIDLLLDARASDFAKSKSHKALTDDEIAAQAFVFLLAGFETTASTLSFALYELAKNPDVQDKLREEI  335 (499)
T ss_pred             hc-----CCCCchHHHHHHHhhcccccccccccccCHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhcChHHHHHHHHHH
Confidence            22     14678999999988642  11   1 59999999999999999999999999999999999999999999999


Q ss_pred             HhhcccCCCCCCCCCChhhhhcchhHHHHHHHhhcCCCCCCcccccccCCCcccCCeeeCCCcEEEEeccccccCCCCCC
Q 047974          322 KRNFSQEGFNKPPLVRLNELNKLVYLHAALCETLRLYPPVPFEIRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWG  401 (497)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g  401 (497)
                      +++...     ...+|++.+.+|+||++||+||||+||+++...|+|+++.++.+++.||||+.|.++.+++||||++| 
T Consensus       336 ~~~~~~-----~~~ltyd~l~~L~YLd~Vi~ETLR~yP~~~~~~R~C~k~~~i~~~~~i~kG~~V~Ip~~alH~Dp~~~-  409 (499)
T KOG0158|consen  336 DEVLEE-----KEGLTYDSLSKLKYLDMVIKETLRLYPPAPFLNRECTKDYEIPGGFVIPKGTPVMIPTYALHHDPEYW-  409 (499)
T ss_pred             HHHhcc-----cCCCCHHHHhCCcHHHHHHHHHHhhCCCcccccceecCceecCCCeEeCCCCEEEeecccccCCcccC-
Confidence            999642     22299999999999999999999999999999999999998844999999999999999999999999 


Q ss_pred             CCCCCCCCCCccCCCCCccCCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCccceee---eeEEEee
Q 047974          402 EDCREFKPERWITEDGRIRHEPPHKFFSFNAGPRICIGKDIAFTLMKATAASIIHNYDVQVVKNHPVTYN---LSIGFRM  478 (497)
Q Consensus       402 ~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~---~~~~~~~  478 (497)
                      |||++|+||||.+++.+  ..++.+|+|||.|||+|+|++||.+|+|+.|++||++|+++..+.......   .++++.|
T Consensus       410 p~Pe~F~PERF~~~~~~--~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL~~f~~~~~~~t~~~~~~~~~~~~l~p  487 (499)
T KOG0158|consen  410 PEPEKFKPERFEEENNK--SRHPGAYLPFGVGPRNCIGMRFALMEAKLALAHLLRNFSFEVCPTTIIPLEGDPKGFTLSP  487 (499)
T ss_pred             CCcccCCCccCCCCccc--ccCCccccCCCCCccccHHHHHHHHHHHHHHHHHHhhCEEecCCcccCcccCCccceeeec
Confidence            99999999999987644  336889999999999999999999999999999999999999872211122   3678899


Q ss_pred             cCceEEEEEecC
Q 047974          479 KHGLLARVSKRS  490 (497)
Q Consensus       479 ~~~~~~~~~~r~  490 (497)
                      ++++++++++|.
T Consensus       488 k~gi~Lkl~~r~  499 (499)
T KOG0158|consen  488 KGGIWLKLEPRD  499 (499)
T ss_pred             CCceEEEEEeCC
Confidence            999999999984


No 4  
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=2.9e-76  Score=571.15  Aligned_cols=447  Identities=31%  Similarity=0.539  Sum_probs=366.7

Q ss_pred             ccCCCCCcccchhhHHHHhhccchHHHHHHHHHHHhCCeeEEeeecccCcceEEEcChhhHHHhhhcCCccccCCccccc
Q 047974           26 KINPTPWNLPLLGMLASVILNINQLHDKVAQILEKTKGSFMIKGSWVAQYDMFLTSDPANVQHIMSTNFSKYHKGSEGRK  105 (497)
Q Consensus        26 ~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~k~g~v~~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~~~~~~~~~  105 (497)
                      +.||||+++|++|++.++......+..++.++..+||++|+.   |+|+.+.++++||+.+++|+.++.....+.+.+..
T Consensus        35 ~~~~gp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~~  111 (497)
T KOG0157|consen   35 KLPPGPPGWPLIGNLLEFLKPLEEILDFVTELLSRYGPIFKT---WLGGKPTVVTTDPELIEEILKSSNENYPKGPDYPE  111 (497)
T ss_pred             ccCCCCCCCCcccchHHhhcchhHHHHHHHHHHHHcCchhhh---hhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHHH
Confidence            478999999999999999644356788999999999999999   99999999999999999999766677888888885


Q ss_pred             cc-cccCCcCeeecCCchHHHHHHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHHHHHHHHHHH
Q 047974          106 RF-DIFGETGLFNSDFDEWKHQRKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLLKRTTFDFAC  184 (497)
Q Consensus       106 ~~-~~~g~~~l~~~~~~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~v~~  184 (497)
                      .. .++|+ |+++++|+.|+++||++.++|+.+.++.++...++..  ..+...+... ..+..+|+.+.++++++|+++
T Consensus       112 ~~~~~lG~-gll~~~g~~W~~~Rk~~~~~f~~~~L~~~~~~~~~~~--~~~~~~~~~~-~~~~~vd~~~~~~~~tld~i~  187 (497)
T KOG0157|consen  112 SLKPWLGD-GLLFSDGEKWHKHRKLLTPAFHFEILKSFVPVFIESS--LILLLLLELA-ASGEEVDLQDLLKRLTLDIIC  187 (497)
T ss_pred             HHHHHhcC-ccccCCchHHHHHHhhccHhhhHHHHHHHHHHHHHHH--HHHHHHHHHh-hcCCeEcHHHHHHHHHHHHHH
Confidence            55 89999 9999999999999999999999999999887655443  2223333332 222339999999999999999


Q ss_pred             HhhcCCCCCCCC-CCCCCCChHHHHHHHHHHHHHH--------HH-----HHHHHhHHHHHHHHHHHHHHHHHHHHHhcc
Q 047974          185 LIATGHNPNSLS-VGFPEMGFPDAVDDACEAILIR--------HL-----EKKLANGWRTIDQFWEKQKSMKQEEIEKGM  250 (497)
Q Consensus       185 ~~~fG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--------~~-----~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  250 (497)
                      .++||.  ...+ .......+.+++.........+        ++     .++..++.+.+++++++.|+++++......
T Consensus       188 ~~~~G~--~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~iI~~rr~~~~~~~  265 (497)
T KOG0157|consen  188 KTAMGP--ESLDAEGPELFEYVQAFDDLTELISKRINLPLGTKFLYGLKSERKLKKARKILHDFLEKIIRERREELEKEG  265 (497)
T ss_pred             HHhcCC--ccccccCCcccHHHHHHHHHHHHHHHHHcCchhhhHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            999992  2211 1223346777776544332211        11     456678999999999999999998765432


Q ss_pred             ccccccchhhHHHHHhcCCCCCCCCCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhhcccCCC
Q 047974          251 EAKEDEGIYSLLNCYLSGHEVTGPTPAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRNFSQEGF  330 (497)
Q Consensus       251 ~~~~~~~~~dll~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~  330 (497)
                      ... .....|+++.+....+   ..+++++|.+++..+++||+|||+++++|++++|+.||++|+|+++|+.++++..  
T Consensus       266 ~~~-~~~~~d~L~~~~~~~~---~~l~~~~i~d~v~tf~faG~DTTss~ltw~l~~La~hP~vq~k~~eEi~~i~~~~--  339 (497)
T KOG0157|consen  266 SGE-EKKRLDFLDTLLLEED---KPLTDEDIRDEVDTFMFAGHDTTSSALTWTLWLLAKHPEVQEKLREEVDEILGNR--  339 (497)
T ss_pred             Ccc-cchhhhHHHHHHHhcc---CCCCHHHHHHHHHHheeeccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCC--
Confidence            211 1346788886443333   4589999999999999999999999999999999999999999999999999632  


Q ss_pred             CCCCCCChhhhhcchhHHHHHHHhhcCCCCCCcccccccCCCcccCCeeeCCCcEEEEeccccccCCCCCCCCCCCCCCC
Q 047974          331 NKPPLVRLNELNKLVYLHAALCETLRLYPPVPFEIRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWGEDCREFKPE  410 (497)
Q Consensus       331 ~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~  410 (497)
                        +...+....++|+||++||+|||||+||+|+..|.+.+|+++.+||.||||+.|+++++++|||+++||+||++||||
T Consensus       340 --~~~~~~~~~~~m~yl~~vi~EsLRLyppvp~~~R~~~~d~~l~~g~~IPkG~~V~i~~~~~~r~~~~~~~dp~~F~Pe  417 (497)
T KOG0157|consen  340 --DDKWEVEKLDQMKYLEMVIKESLRLYPPVPLVARKATKDVKLPGGYTIPKGTNVLISIYALHRDPRVWGEDPEEFDPE  417 (497)
T ss_pred             --CCCCChhhhhhhHHHHHHHHHHhccCCCCchhhcccCCCeEcCCCcEeCCCCEEEEehHHhccCccccCCChhhcCcc
Confidence              122233333369999999999999999999999999999999779999999999999999999999997799999999


Q ss_pred             CccCCCCCccCCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCccceeeeeEEEeecCceEEEEEecC
Q 047974          411 RWITEDGRIRHEPPHKFFSFNAGPRICIGKDIAFTLMKATAASIIHNYDVQVVKNHPVTYNLSIGFRMKHGLLARVSKRS  490 (497)
Q Consensus       411 Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  490 (497)
                      ||+++.... ..++++|+|||+|+|.|+|+.||++|+|+++++++++|+|++..+....+....+++|..+++|++++|.
T Consensus       418 Rf~~~~~~~-~~~~~~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~f~~~~~~~~~~~~~~~~~l~~~~gl~v~~~~r~  496 (497)
T KOG0157|consen  418 RFLDGEEKA-KRHPFAFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRRFRIEPVGGDKPKPVPELTLRPKNGLKVKLRPRG  496 (497)
T ss_pred             ccCCCCCcC-CCCCccccCCCCCcccchhHHHHHHHHHHHHHHHHHheEEEecCCCCceeeeEEEEEecCCeEEEEEeCC
Confidence            999754322 3357999999999999999999999999999999999999998765467788899999999999999986


No 5  
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=2.3e-75  Score=574.78  Aligned_cols=458  Identities=31%  Similarity=0.530  Sum_probs=354.0

Q ss_pred             hccCCCCCcccchhhHHHHhhccchHHHHHHHHHHHhCCeeEEeeecccCcceEEEcChhhHHHhhhcCCccccCCcccc
Q 047974           25 RKINPTPWNLPLLGMLASVILNINQLHDKVAQILEKTKGSFMIKGSWVAQYDMFLTSDPANVQHIMSTNFSKYHKGSEGR  104 (497)
Q Consensus        25 ~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~k~g~v~~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~~~~~~~~  104 (497)
                      ++.+|||+++|++||+.++..+...++++.....+ +|++|.+   ++|+.+.++++||+.+++|+.++...|.+.+.+.
T Consensus        29 ~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~  104 (516)
T PLN03195         29 QRNRKGPKSWPIIGAALEQLKNYDRMHDWLVEYLS-KDRTVVV---KMPFTTYTYIADPVNVEHVLKTNFANYPKGEVYH  104 (516)
T ss_pred             ccccCCCCCCCeecchHHHHhccchHHHHHHHHhc-cCCcEEE---eeCCCCceEecCHHHHHHHHhhCccccCCcHhHH
Confidence            44678999999999998765443233333333322 2789999   9999999999999999999987655677765543


Q ss_pred             ccc-cccCCcCeeecCCchHHHHHHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHHHHHHHHHH
Q 047974          105 KRF-DIFGETGLFNSDFDEWKHQRKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLLKRTTFDFA  183 (497)
Q Consensus       105 ~~~-~~~g~~~l~~~~~~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~v~  183 (497)
                      ... .+.|. ++++.+|+.|+++||++++.|+.++++.+.+.+..+. .+.+.+.+++....++.+|+.+++..++++++
T Consensus       105 ~~~~~~~g~-~l~~~~g~~w~~~Rr~l~~~fs~~~l~~~~~~~~~~~-~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi  182 (516)
T PLN03195        105 SYMEVLLGD-GIFNVDGELWRKQRKTASFEFASKNLRDFSTVVFREY-SLKLSSILSQASFANQVVDMQDLFMRMTLDSI  182 (516)
T ss_pred             HHHHHHhcC-eeeccCcHHHHHHHHhcchhhhHHHHHHHHHHHHHHH-HHHHHHHHHHHHhcCCeEcHHHHHHHHHHHHH
Confidence            333 34677 8888999999999999999999999988765433433 46666666554344568999999999999999


Q ss_pred             HHhhcCCCCCCCCCCCCCCChHHHHHHHHHHHHHHH----------H----HHHHHhHHHHHHHHHHHHHHHHHHHHHhc
Q 047974          184 CLIATGHNPNSLSVGFPEMGFPDAVDDACEAILIRH----------L----EKKLANGWRTIDQFWEKQKSMKQEEIEKG  249 (497)
Q Consensus       184 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~----~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  249 (497)
                      +.++||.+++..+.+.....+.+.+.........+.          +    .+...++.+.+.+++.+.++++++.....
T Consensus       183 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  262 (516)
T PLN03195        183 CKVGFGVEIGTLSPSLPENPFAQAFDTANIIVTLRFIDPLWKLKKFLNIGSEALLSKSIKVVDDFTYSVIRRRKAEMDEA  262 (516)
T ss_pred             HHHHhCCCccccccCCCccHHHHHHHHHHHHHHHHHhcchhhHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            999999988765533222345544443322111100          0    12234567778888888888887654321


Q ss_pred             cccccccchhhHHHHHhcCCCCCCCCCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhhcccC-
Q 047974          250 MEAKEDEGIYSLLNCYLSGHEVTGPTPAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRNFSQE-  328 (497)
Q Consensus       250 ~~~~~~~~~~dll~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~-  328 (497)
                      ... .+....|+++.+++..++++..++++++.++++.+++||+|||+++++|++++|++||++|+|+++|++++++.. 
T Consensus       263 ~~~-~~~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~  341 (516)
T PLN03195        263 RKS-GKKVKHDILSRFIELGEDPDSNFTDKSLRDIVLNFVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSELKALEKERA  341 (516)
T ss_pred             ccc-cccccccHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhccc
Confidence            100 112356899999976544345699999999999999999999999999999999999999999999999987421 


Q ss_pred             ---CC-----------CCCCCCChhhhhcchhHHHHHHHhhcCCCCCCcccccccCCCcccCCeeeCCCcEEEEeccccc
Q 047974          329 ---GF-----------NKPPLVRLNELNKLVYLHAALCETLRLYPPVPFEIRIPLQPDVLPSGHQVNQNTHVLISAYSMA  394 (497)
Q Consensus       329 ---~~-----------~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~  394 (497)
                         ++           +.+..++.+++.+||||+|||+||||++|++|...|++.+++++++||.|||||.|+++.+++|
T Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~~r~~~~d~~~~~G~~IpkGt~V~~~~~~~h  421 (516)
T PLN03195        342 KEEDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMG  421 (516)
T ss_pred             ccccccccchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcchhhhhccCcCcCCCcEECCCCEEEEehHhhc
Confidence               00           0134589999999999999999999999999999998888888779999999999999999999


Q ss_pred             cCCCCCCCCCCCCCCCCccCCCCCccCCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCccceeeeeE
Q 047974          395 RMTSVWGEDCREFKPERWITEDGRIRHEPPHKFFSFNAGPRICIGKDIAFTLMKATAASIIHNYDVQVVKNHPVTYNLSI  474 (497)
Q Consensus       395 ~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~  474 (497)
                      |||++||+||++|+||||++.+. .....+..|+|||+|+|.|+|++||++|++++++.|+++|++++.++.+.......
T Consensus       422 ~dp~~~g~dP~~F~PeRwl~~~~-~~~~~~~~~~pFG~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~  500 (516)
T PLN03195        422 RMEYNWGPDAASFKPERWIKDGV-FQNASPFKFTAFQAGPRICLGKDSAYLQMKMALALLCRFFKFQLVPGHPVKYRMMT  500 (516)
T ss_pred             cChhhhccChhhcCCcccCCCCC-cCCCCCceEeccCCCCCcCcCHHHHHHHHHHHHHHHHHhceeEecCCCcceeeeee
Confidence            99999999999999999996422 11224567999999999999999999999999999999999999765554444556


Q ss_pred             EEeecCceEEEEEecC
Q 047974          475 GFRMKHGLLARVSKRS  490 (497)
Q Consensus       475 ~~~~~~~~~~~~~~r~  490 (497)
                      +..|+.+++|++++|.
T Consensus       501 ~~~~~~~~~v~~~~r~  516 (516)
T PLN03195        501 ILSMANGLKVTVSRRS  516 (516)
T ss_pred             EEecCCCEEEEEEeCC
Confidence            7788899999999984


No 6  
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=2.8e-74  Score=567.67  Aligned_cols=446  Identities=18%  Similarity=0.288  Sum_probs=340.1

Q ss_pred             ccCCCCCcccchhhHHHHhhccchHHHHHHHHHHHhC-CeeEEeeecccCcceEEEcChhhHHHhhhcCCccccCCcccc
Q 047974           26 KINPTPWNLPLLGMLASVILNINQLHDKVAQILEKTK-GSFMIKGSWVAQYDMFLTSDPANVQHIMSTNFSKYHKGSEGR  104 (497)
Q Consensus        26 ~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~k~g-~v~~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~~~~~~~~  104 (497)
                      ++||||+++|++||++++..+. ..+.++.++.++|| +++.+   ++|++++|+++||+.+++++.++...|.+++...
T Consensus        57 ~lPPGP~~lPiiGnl~~l~~~~-~~~~~l~~~~~~yg~~i~~~---~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp~~~  132 (543)
T PLN02971         57 PLPPGPTGFPIVGMIPAMLKNR-PVFRWLHSLMKELNTEIACV---RLGNTHVIPVTCPKIAREIFKQQDALFASRPLTY  132 (543)
T ss_pred             CCCcCCCCCCcccchHHhccCC-cHhHHHHHHHHHhCCceEEE---EcCCcceEEECCHHHHHHHHHhcchhhcCCCccc
Confidence            3899999999999999885431 24678899999999 79998   9999999999999999999998777788776432


Q ss_pred             ccccccCC---cCeeecCCchHHHHHHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHHHHHHHH
Q 047974          105 KRFDIFGE---TGLFNSDFDEWKHQRKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLLKRTTFD  181 (497)
Q Consensus       105 ~~~~~~g~---~~l~~~~~~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~  181 (497)
                       ....+|.   .+++..+|+.|+++||++.+.+........+..++++. .+.+.+++.+...+++++|+.+.+.+++++
T Consensus       133 -~~~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~-~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~  210 (543)
T PLN02971        133 -AQKILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEE-TDHLTAWLYNMVKNSEPVDLRFVTRHYCGN  210 (543)
T ss_pred             -chhhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHH-HHHHHHHHHHhccCCCceehHHHHHHHHHH
Confidence             2233444   13677889999999999986644333333334445444 566777766544445679999999999999


Q ss_pred             HHHHhhcCCCCCCCCC---CCCCCChHHHHHHHHHHH-------H------HHHH-----HHHHHhHHHHHHHHHHHHHH
Q 047974          182 FACLIATGHNPNSLSV---GFPEMGFPDAVDDACEAI-------L------IRHL-----EKKLANGWRTIDQFWEKQKS  240 (497)
Q Consensus       182 v~~~~~fG~~~~~~~~---~~~~~~~~~~~~~~~~~~-------~------~~~~-----~~~~~~~~~~~~~~~~~~i~  240 (497)
                      ++++++||.++.....   +.....+.+.+.......       .      ++.+     .+...+..+.+.+++...|+
T Consensus       211 vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~  290 (543)
T PLN02971        211 AIKRLMFGTRTFSEKTEPDGGPTLEDIEHMDAMFEGLGFTFAFCISDYLPMLTGLDLNGHEKIMRESSAIMDKYHDPIID  290 (543)
T ss_pred             HHHHHHhCCcccccccccccchhHHHHHHHHHHHHHHHhccCCcHHHhCCchhhhcccchHHHHHHHHHHHHHHHHHHHH
Confidence            9999999987643210   011112222232222110       0      1110     12234456677888888888


Q ss_pred             HHHHHHHhccccccccchhhHHHHHhcCCCCCCC-CCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHH
Q 047974          241 MKQEEIEKGMEAKEDEGIYSLLNCYLSGHEVTGP-TPAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIRE  319 (497)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~-~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~  319 (497)
                      ++++....+..    ....|+++.+++..++++. .++++++.+++..+++||+|||+++++|++++|+.||++|+|+++
T Consensus       291 ~~~~~~~~~~~----~~~~d~l~~ll~~~~~~~~~~ls~~~i~~~~~~l~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~  366 (543)
T PLN02971        291 ERIKMWREGKR----TQIEDFLDIFISIKDEAGQPLLTADEIKPTIKELVMAAPDNPSNAVEWAMAEMINKPEILHKAME  366 (543)
T ss_pred             HHHHHHhccCC----CCCcCHHHHHHhhhcccCCCCCCHHHHHHhHHHHheeccchHHHHHHHHHHHHHhCHHHHHHHHH
Confidence            87654432210    1246899999986543333 489999999999999999999999999999999999999999999


Q ss_pred             HHHhhcccCCCCCCCCCChhhhhcchhHHHHHHHhhcCCCCCCccc-ccccCCCcccCCeeeCCCcEEEEeccccccCCC
Q 047974          320 ELKRNFSQEGFNKPPLVRLNELNKLVYLHAALCETLRLYPPVPFEI-RIPLQPDVLPSGHQVNQNTHVLISAYSMARMTS  398 (497)
Q Consensus       320 Ei~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~-r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~  398 (497)
                      ||+++++     .++.++.+++.+|||++|||+|+||++|++|... |.+.+|.++ +||.|||||.|+++.+++||||+
T Consensus       367 EI~~v~g-----~~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~-~G~~IpkGt~v~~~~~~~~~d~~  440 (543)
T PLN02971        367 EIDRVVG-----KERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTV-AGYHIPKGSQVLLSRYGLGRNPK  440 (543)
T ss_pred             HHHHHhC-----CCCCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCCCeeE-CCEEECCCCEEEECcHHhcCChh
Confidence            9999984     3567899999999999999999999999999854 556666555 99999999999999999999999


Q ss_pred             CCCCCCCCCCCCCccCCCCCc-cCCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCc-c--ceeeeeE
Q 047974          399 VWGEDCREFKPERWITEDGRI-RHEPPHKFFSFNAGPRICIGKDIAFTLMKATAASIIHNYDVQVVKNH-P--VTYNLSI  474 (497)
Q Consensus       399 ~~g~~p~~F~P~Rfl~~~~~~-~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~-~--~~~~~~~  474 (497)
                      +| +||++|+||||++++++. ....+..|+|||+|+|.|+|++||+.|++++++.|+++|+|++.++. .  .....+ 
T Consensus       441 ~~-~dP~~F~PeRfl~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~-  518 (543)
T PLN02971        441 VW-SDPLSFKPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAGSETRVELMESSH-  518 (543)
T ss_pred             hC-CCccccCcccCCCCCccccccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEEeCCCCCCcchhhhcC-
Confidence            99 999999999999754321 12245689999999999999999999999999999999999987643 2  222334 


Q ss_pred             EEeecCceEEEEEec
Q 047974          475 GFRMKHGLLARVSKR  489 (497)
Q Consensus       475 ~~~~~~~~~~~~~~r  489 (497)
                      ++..++++.+.+++|
T Consensus       519 ~~~~~~~~~~~~~~~  533 (543)
T PLN02971        519 DMFLSKPLVMVGELR  533 (543)
T ss_pred             cccccccceeeeeec
Confidence            554567899999999


No 7  
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=1e-73  Score=563.56  Aligned_cols=438  Identities=19%  Similarity=0.300  Sum_probs=345.8

Q ss_pred             ccCCCCCcccchhhHHHHhhc----------------cchHHHHHHHHHHHhCCeeEEeeecccCcceEEEcChhhHHHh
Q 047974           26 KINPTPWNLPLLGMLASVILN----------------INQLHDKVAQILEKTKGSFMIKGSWVAQYDMFLTSDPANVQHI   89 (497)
Q Consensus        26 ~~ppgp~~~P~~G~~~~~~~~----------------~~~~~~~~~~~~~k~g~v~~~~~~~~~~~~~v~v~~p~~v~~i   89 (497)
                      +.||||+++|++||++++...                ..+....+.+++++||++|.+   |+|+.++|+++||+.++++
T Consensus        42 ~~~PGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~---~~g~~~~vvv~dp~~v~~i  118 (516)
T PLN02290         42 QGVRGPKPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGKRFIY---WNGTEPRLCLTETELIKEL  118 (516)
T ss_pred             cCCCCCCCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCCeEEE---ccCCccEEEECCHHHHHHH
Confidence            379999999999999888531                012233567889999999999   9999999999999999999


Q ss_pred             hhcCCccccCCccccc--cccccCCcCeeecCCchHHHHHHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCC-C
Q 047974           90 MSTNFSKYHKGSEGRK--RFDIFGETGLFNSDFDEWKHQRKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEE-K  166 (497)
Q Consensus        90 l~~~~~~~~~~~~~~~--~~~~~g~~~l~~~~~~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~-~  166 (497)
                      +.++ ..+..++....  .....|. +++.++|+.|+++||++.+.|+.++++.+.+ .+.+. .+.+.+.+.+.... +
T Consensus       119 l~~~-~~~~~r~~~~~~~~~~~~g~-~l~~~~g~~Wk~~Rk~~~~~f~~~~l~~~~~-~i~~~-~~~l~~~l~~~~~~~~  194 (516)
T PLN02290        119 LTKY-NTVTGKSWLQQQGTKHFIGR-GLLMANGADWYHQRHIAAPAFMGDRLKGYAG-HMVEC-TKQMLQSLQKAVESGQ  194 (516)
T ss_pred             HhcC-CCCCCCcchhhhHHHHHhcC-CccccCchHHHHHHhhcccccCHHHHHHHHH-HHHHH-HHHHHHHHHHHHhcCC
Confidence            9876 34444443221  1234576 8999999999999999999999999988764 45555 46666666654333 3


Q ss_pred             ceeeHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCChHHHHHHHHHH----------HHHHHH----HHHHHhHHHHHH
Q 047974          167 MLVDFQDLLKRTTFDFACLIATGHNPNSLSVGFPEMGFPDAVDDACEA----------ILIRHL----EKKLANGWRTID  232 (497)
Q Consensus       167 ~~vdl~~~~~~~~~~v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~----~~~~~~~~~~~~  232 (497)
                      ..+|+.+.+..++++++++++||.++...      ..+.+.+..+...          +..+++    .+...+..+.+.
T Consensus       195 ~~vd~~~~~~~~~~~vi~~~~fG~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~p~~~~~p~~~~~~~~~~~~~~~  268 (516)
T PLN02290        195 TEVEIGEYMTRLTADIISRTEFDSSYEKG------KQIFHLLTVLQRLCAQATRHLCFPGSRFFPSKYNREIKSLKGEVE  268 (516)
T ss_pred             ceEEhHHHHHHHHHHHHHHHHcCCccccc------hHHHHHHHHHHHHHHHhhhhhcCchhhhCCChhHHHHHHHHHHHH
Confidence            57999999999999999999999876421      1222222221111          001111    233455677888


Q ss_pred             HHHHHHHHHHHHHHHhccccccccchhhHHHHHhcCCC---CCCCCCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhc
Q 047974          233 QFWEKQKSMKQEEIEKGMEAKEDEGIYSLLNCYLSGHE---VTGPTPAEKVMRDNITALIFATEGTTSIALTWFFWLVSK  309 (497)
Q Consensus       233 ~~~~~~i~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~---~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~  309 (497)
                      +++.+.|+++++..+.+..   +....|+++.+++...   .++..++++++.+++..+++||+|||+++++|++++|++
T Consensus       269 ~~~~~~i~~~~~~~~~~~~---~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~tl~~~l~~L~~  345 (516)
T PLN02290        269 RLLMEIIQSRRDCVEIGRS---SSYGDDLLGMLLNEMEKKRSNGFNLNLQLIMDECKTFFFAGHETTALLLTWTLMLLAS  345 (516)
T ss_pred             HHHHHHHHHHHHHhhcccC---CCCCCCHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Confidence            8999999888765543211   1234689999987533   123348899999999999999999999999999999999


Q ss_pred             ChHHHHHHHHHHHhhcccCCCCCCCCCChhhhhcchhHHHHHHHhhcCCCCCCcccccccCCCcccCCeeeCCCcEEEEe
Q 047974          310 NPFAETKIREELKRNFSQEGFNKPPLVRLNELNKLVYLHAALCETLRLYPPVPFEIRIPLQPDVLPSGHQVNQNTHVLIS  389 (497)
Q Consensus       310 ~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~  389 (497)
                      ||++|+|+++|++++++     . ..++.+++++||||+|||+||||++|+++...|.+.+|.++ +||.|||||.|+++
T Consensus       346 ~P~vq~kl~~Ei~~v~~-----~-~~~~~~~l~~lpYl~avi~EtlRl~p~~~~~~R~~~~d~~i-~g~~IP~Gt~V~~~  418 (516)
T PLN02290        346 NPTWQDKVRAEVAEVCG-----G-ETPSVDHLSKLTLLNMVINESLRLYPPATLLPRMAFEDIKL-GDLHIPKGLSIWIP  418 (516)
T ss_pred             CHHHHHHHHHHHHHHhC-----C-CCCCHHHHhcChHHHHHHHHHHHcCCCccccceeecCCeeE-CCEEECCCCEEEec
Confidence            99999999999999984     2 36899999999999999999999999999888888877666 99999999999999


Q ss_pred             ccccccCCCCCCCCCCCCCCCCccCCCCCccCCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCccce
Q 047974          390 AYSMARMTSVWGEDCREFKPERWITEDGRIRHEPPHKFFSFNAGPRICIGKDIAFTLMKATAASIIHNYDVQVVKNHPVT  469 (497)
Q Consensus       390 ~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~  469 (497)
                      .+++||||++||+||++|+||||++.+.    .....|+|||+|+|.|+|++||++|++++++.|+++|++++.++....
T Consensus       419 ~~~~~rdp~~~~~dP~~F~PeRfl~~~~----~~~~~~~pFG~G~R~C~G~~lA~~el~l~la~ll~~f~~~~~~~~~~~  494 (516)
T PLN02290        419 VLAIHHSEELWGKDANEFNPDRFAGRPF----APGRHFIPFAAGPRNCIGQAFAMMEAKIILAMLISKFSFTISDNYRHA  494 (516)
T ss_pred             HHHhcCChhhhCCChhhcCccccCCCCC----CCCCeEecCCCCCCCCccHHHHHHHHHHHHHHHHHhceEeeCCCcccC
Confidence            9999999999977999999999995421    134579999999999999999999999999999999999998764334


Q ss_pred             eeeeEEEeecCceEEEEEecC
Q 047974          470 YNLSIGFRMKHGLLARVSKRS  490 (497)
Q Consensus       470 ~~~~~~~~~~~~~~~~~~~r~  490 (497)
                      ...+.+..|++++++++++|+
T Consensus       495 ~~~~~~~~p~~~~~~~~~~~~  515 (516)
T PLN02290        495 PVVVLTIKPKYGVQVCLKPLN  515 (516)
T ss_pred             ccceeeecCCCCCeEEEEeCC
Confidence            445678899999999999985


No 8  
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=2.6e-73  Score=556.59  Aligned_cols=438  Identities=18%  Similarity=0.237  Sum_probs=335.9

Q ss_pred             ccCCCCCcccchhhHHHHhhc--cchHHHHHHHHHHHhCCeeEEeeecccCcceEEEcChhhHHHhhhcCCccccCCccc
Q 047974           26 KINPTPWNLPLLGMLASVILN--INQLHDKVAQILEKTKGSFMIKGSWVAQYDMFLTSDPANVQHIMSTNFSKYHKGSEG  103 (497)
Q Consensus        26 ~~ppgp~~~P~~G~~~~~~~~--~~~~~~~~~~~~~k~g~v~~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~~~~~~~  103 (497)
                      ++||||+++|++||+..+...  ...++.++.+++++||++|.+   ++|++++|+++||+++++++.++...|.++.. 
T Consensus        38 ~~PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~---~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~~~-  113 (490)
T PLN02500         38 NLPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRYGKIYRS---NLFGEPTIVSADAGLNRFILQNEGRLFECSYP-  113 (490)
T ss_pred             CCCCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhcccccc---cccCCCeEEecCHHHHHHHHhCCCCeEEeeCc-
Confidence            389999999999998766432  235778899999999999998   99999999999999999999887555643311 


Q ss_pred             cccccccCCcCeeecCCchHHHHHHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHHHHHHHHHH
Q 047974          104 RKRFDIFGETGLFNSDFDEWKHQRKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLLKRTTFDFA  183 (497)
Q Consensus       104 ~~~~~~~g~~~l~~~~~~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~v~  183 (497)
                      .....++|..++++.+|+.|+++|+++.+.|+..+++.++.+.+++. ...+.+.+.    .++.+|+.+.+..++++++
T Consensus       114 ~~~~~~~g~~~~~~~~g~~wr~~Rk~~~~~f~~~~l~~~~~~~~~~~-~~~~~~~~~----~~~~vd~~~~~~~~~~~vi  188 (490)
T PLN02500        114 RSIGGILGKWSMLVLVGDMHRDMRSISLNFLSHARLRTHLLKEVERH-TLLVLDSWK----ENSTFSAQDEAKKFTFNLM  188 (490)
T ss_pred             hHHHHHhCcccccccCCHHHHHHHHHHHHhcChHHHHHHHHHHHHHH-HHHHHHHhC----CCCCEEehHHHHHHHHHHH
Confidence            11123345336888899999999999999999998887433334333 222333332    2356899999999999999


Q ss_pred             HHhhcCCCCCCCCCCCCCCChHHHHHHHHHHHHH-----H-HHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccccccccc
Q 047974          184 CLIATGHNPNSLSVGFPEMGFPDAVDDACEAILI-----R-HLEKKLANGWRTIDQFWEKQKSMKQEEIEKGMEAKEDEG  257 (497)
Q Consensus       184 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  257 (497)
                      ++++||.+.+..+    ...+.+.+.........     . ...++..++.+.+.+++.+.++++++....+..   ...
T Consensus       189 ~~~~fg~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~---~~~  261 (490)
T PLN02500        189 AKHIMSMDPGEEE----TEQLKKEYVTFMKGVVSAPLNFPGTAYRKALKSRATILKFIERKMEERIEKLKEEDE---SVE  261 (490)
T ss_pred             HHHHhCCCCCchH----HHHHHHHHHHHHhhhhcchhcCCCcccHHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CCC
Confidence            9999998653211    11222222222221100     0 013455567788999999999888765432210   013


Q ss_pred             hhhHHHHHhcCCCCCCCCCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhhcccCCCCCCCCCC
Q 047974          258 IYSLLNCYLSGHEVTGPTPAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRNFSQEGFNKPPLVR  337 (497)
Q Consensus       258 ~~dll~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~  337 (497)
                      ..|+++.+++..     .++++++.+++..+++||+|||+++++|++++|++||++|+|+++|++++.+.....++..++
T Consensus       262 ~~d~l~~ll~~~-----~ls~~~i~~~~~~ll~AG~dTta~tl~~~l~~L~~~Pevq~kl~~Ei~~v~~~~~~~~~~~~~  336 (490)
T PLN02500        262 EDDLLGWVLKHS-----NLSTEQILDLILSLLFAGHETSSVAIALAIFFLQGCPKAVQELREEHLEIARAKKQSGESELN  336 (490)
T ss_pred             cchHHHHHHhcc-----CCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccccCCCCCCC
Confidence            468999999753     389999999999999999999999999999999999999999999999987421101234589


Q ss_pred             hhhhhcchhHHHHHHHhhcCCCCCCcccccccCCCcccCCeeeCCCcEEEEeccccccCCCCCCCCCCCCCCCCccCCCC
Q 047974          338 LNELNKLVYLHAALCETLRLYPPVPFEIRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWGEDCREFKPERWITEDG  417 (497)
Q Consensus       338 ~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~  417 (497)
                      .+++++|||++|||+|+||++|+++...|.+.+|.++ +||.|||||.|+++.+++||||++| +||++|+||||+++++
T Consensus       337 ~~d~~~lpyl~avikEtlRl~P~~~~~~R~~~~d~~~-~G~~IPkGt~V~~~~~~~hrdp~~~-~dP~~F~PeRfl~~~~  414 (490)
T PLN02500        337 WEDYKKMEFTQCVINETLRLGNVVRFLHRKALKDVRY-KGYDIPSGWKVLPVIAAVHLDSSLY-DQPQLFNPWRWQQNNN  414 (490)
T ss_pred             HHHhccCHHHHHHHHHHHhcCCCccCeeeEeCCCcee-CCEEECCCCEEEechhhcccCcccC-CCccccChhhccCCCc
Confidence            9999999999999999999999999988888887776 9999999999999999999999999 9999999999997543


Q ss_pred             Ccc-----CCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCccceeeeeEEEeecCceEEEEEe
Q 047974          418 RIR-----HEPPHKFFSFNAGPRICIGKDIAFTLMKATAASIIHNYDVQVVKNHPVTYNLSIGFRMKHGLLARVSK  488 (497)
Q Consensus       418 ~~~-----~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  488 (497)
                      +..     ...+..|+|||+|+|.|+|++||++|+++++++|+++|+|++.++..... .. ...++++++|++++
T Consensus       415 ~~~~~~~~~~~~~~~lpFG~G~R~CiG~~~A~~el~~~la~ll~~f~~~~~~~~~~~~-~~-~~~~~~~l~~~~~~  488 (490)
T PLN02500        415 RGGSSGSSSATTNNFMPFGGGPRLCAGSELAKLEMAVFIHHLVLNFNWELAEADQAFA-FP-FVDFPKGLPIRVRR  488 (490)
T ss_pred             ccccccccCCCCCCCcCCCCCCCCCCcHHHHHHHHHHHHHHHHhccEEEEcCCCccee-cc-cccCCCCceEEEEe
Confidence            211     12457899999999999999999999999999999999999987554322 22 33556799999876


No 9  
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=1.4e-72  Score=553.75  Aligned_cols=442  Identities=17%  Similarity=0.282  Sum_probs=342.8

Q ss_pred             ccCCCCCcccchhhHHHHhhccchHHHHHHHHHHHhCCeeEEeeecccCcceEEEcChhhHHHhhhcCCccccCCccccc
Q 047974           26 KINPTPWNLPLLGMLASVILNINQLHDKVAQILEKTKGSFMIKGSWVAQYDMFLTSDPANVQHIMSTNFSKYHKGSEGRK  105 (497)
Q Consensus        26 ~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~k~g~v~~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~~~~~~~~~  105 (497)
                      +.||||+++|++||+.++...  +++.++.+++++||++|++   ++|+.++|+++||+++++++.++...|.+++.+..
T Consensus        28 ~~pPgp~~~P~iG~~~~~~~~--~~~~~~~~~~~~yG~~~~~---~lg~~~~vvv~dpe~~~~il~~~~~~f~~r~~~~~  102 (499)
T PLN03234         28 RLPPGPKGLPIIGNLHQMEKF--NPQHFLFRLSKLYGPIFTM---KIGGRRLAVISSAELAKELLKTQDLNFTARPLLKG  102 (499)
T ss_pred             CCCcCCCCCCeeccHHhcCCC--CccHHHHHHHHHcCCeEEE---EecCcCEEEECCHHHHHHHHHhCCccccCCCCchh
Confidence            378999999999999887432  3567889999999999999   99999999999999999999987667887775432


Q ss_pred             cc--cccCCcCe-eecCCchHHHHHHhh-hcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHHHHHHHH
Q 047974          106 RF--DIFGETGL-FNSDFDEWKHQRKLA-RAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLLKRTTFD  181 (497)
Q Consensus       106 ~~--~~~g~~~l-~~~~~~~w~~~R~~~-~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~  181 (497)
                      ..  ...|. ++ +...++.|+++||.+ .+.|+++++..+.+ .+++. .+.+.+.+.+....++++|+.+.+..++++
T Consensus       103 ~~~~~~~~~-~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~~-~i~~~-~~~ll~~l~~~~~~~~~vd~~~~~~~~t~d  179 (499)
T PLN03234        103 QQTMSYQGR-ELGFGQYTAYYREMRKMCMVNLFSPNRVASFRP-VREEE-CQRMMDKIYKAADQSGTVDLSELLLSFTNC  179 (499)
T ss_pred             hhhhccCCC-ccccCCCcHHHHHHHHHHHHHhcCHHHHHHhHH-HHHHH-HHHHHHHHHHhccCCCeEEHHHHHHHHHHH
Confidence            21  22233 32 335578999999985 68899999988754 45555 566666666544556789999999999999


Q ss_pred             HHHHhhcCCCCCCCCCCCCCCChHHHHHHHHHH----------HHHHHH------HHHHHhHHHHHHHHHHHHHHHHHHH
Q 047974          182 FACLIATGHNPNSLSVGFPEMGFPDAVDDACEA----------ILIRHL------EKKLANGWRTIDQFWEKQKSMKQEE  245 (497)
Q Consensus       182 v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~------~~~~~~~~~~~~~~~~~~i~~~~~~  245 (497)
                      ++++++||.+++..+.  ....+.+.+......          ++..++      .++..++.+.+.+++.++|+++++.
T Consensus       180 vi~~~~fG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~  257 (499)
T PLN03234        180 VVCRQAFGKRYNEYGT--EMKRFIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARLKKAFKELDTYLQELLDETLDP  257 (499)
T ss_pred             HHHHHHhCCcccccch--hHHHHHHHHHHHHHHcCCCcHHHHhhHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            9999999998764321  112233333222110          111111      2456678888899999999887643


Q ss_pred             HHhccccccccchhhHHHHHhcCCCCC--CCCCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHh
Q 047974          246 IEKGMEAKEDEGIYSLLNCYLSGHEVT--GPTPAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKR  323 (497)
Q Consensus       246 ~~~~~~~~~~~~~~dll~~ll~~~~~~--~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~  323 (497)
                      ....      ....|+++.+++..+++  +..++++++.+++..+++||+|||+++++|++++|++||++|+|+++|+++
T Consensus       258 ~~~~------~~~~d~l~~l~~~~~~~~~~~~~~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~v~~kl~~Ei~~  331 (499)
T PLN03234        258 NRPK------QETESFIDLLMQIYKDQPFSIKFTHENVKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEVRN  331 (499)
T ss_pred             cccC------CCcccHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence            2211      23468888888654322  235899999999999999999999999999999999999999999999999


Q ss_pred             hcccCCCCCCCCCChhhhhcchhHHHHHHHhhcCCCCCCcc-cccccCCCcccCCeeeCCCcEEEEeccccccCCCCCCC
Q 047974          324 NFSQEGFNKPPLVRLNELNKLVYLHAALCETLRLYPPVPFE-IRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWGE  402 (497)
Q Consensus       324 ~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~-~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~  402 (497)
                      +++     +.+.++.+++.+|||++|||+|+||++|++++. .|.+.+|.++ +||.|||||.|+++.+++||||++||+
T Consensus       332 ~~~-----~~~~~~~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~-~g~~IP~Gt~v~~~~~~~~rd~~~~~~  405 (499)
T PLN03234        332 VIG-----DKGYVSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKI-GGYDIPAKTIIQVNAWAVSRDTAAWGD  405 (499)
T ss_pred             HhC-----CCCCCCHHHHhcChHHHHHHHHHhccCCCccccCCcccCCCeeE-CCEEECCCCEEEEehHhhhCCcccccC
Confidence            984     345689999999999999999999999999986 4666666555 999999999999999999999999988


Q ss_pred             CCCCCCCCCccCCCCCcc-CCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCc---cc--eeeeeEEE
Q 047974          403 DCREFKPERWITEDGRIR-HEPPHKFFSFNAGPRICIGKDIAFTLMKATAASIIHNYDVQVVKNH---PV--TYNLSIGF  476 (497)
Q Consensus       403 ~p~~F~P~Rfl~~~~~~~-~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~---~~--~~~~~~~~  476 (497)
                      ||++||||||+++.+... ......|+|||+|+|.|+|+++|++|++++++.|+++|++++.++.   +.  ....+.+.
T Consensus       406 ~P~~F~PeR~l~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~  485 (499)
T PLN03234        406 NPNEFIPERFMKEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIKPEDIKMDVMTGLAM  485 (499)
T ss_pred             ChhhcCchhhcCCCCCcCcCCCcceEeCCCCCCCCCCChHHHHHHHHHHHHHHHHheeeeCCCCCCCCCCCccccccccc
Confidence            999999999997643211 2246689999999999999999999999999999999999998752   12  22445566


Q ss_pred             eecCceEEEEEec
Q 047974          477 RMKHGLLARVSKR  489 (497)
Q Consensus       477 ~~~~~~~~~~~~r  489 (497)
                      .|++.+.+..++|
T Consensus       486 ~~~~~~~~~~~~~  498 (499)
T PLN03234        486 HKKEHLVLAPTKH  498 (499)
T ss_pred             ccCCCeEEEeecC
Confidence            6777666666654


No 10 
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=7e-73  Score=553.36  Aligned_cols=433  Identities=19%  Similarity=0.314  Sum_probs=337.1

Q ss_pred             cCCCCCcccchhhHHHHhhccchHHHHHHHHHHHhCCeeEEeeecccCcceEEEcChhhHHHhhhcCCccccCCcccccc
Q 047974           27 INPTPWNLPLLGMLASVILNINQLHDKVAQILEKTKGSFMIKGSWVAQYDMFLTSDPANVQHIMSTNFSKYHKGSEGRKR  106 (497)
Q Consensus        27 ~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~k~g~v~~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~~~~~~~~~~  106 (497)
                      .+|||+++|++||+.++..   +++.++.+++++||++|++   ++|+.++|+++||+.+++++.++...|.+++.....
T Consensus        30 ~~pgp~~~p~~G~~~~~~~---~~~~~~~~~~~~yG~i~~~---~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~~~  103 (482)
T PTZ00404         30 ELKGPIPIPILGNLHQLGN---LPHRDLTKMSKKYGGIFRI---WFADLYTVVLSDPILIREMFVDNFDNFSDRPKIPSI  103 (482)
T ss_pred             CCCCCCCCCeeccHhhhcc---cHHHHHHHHHHHhCCeeEE---EecCCCEEEECCHHHHHHHHHhcchhhcCCCCccee
Confidence            6789999999999988854   4788999999999999999   999999999999999999998765667666544332


Q ss_pred             c-cccCCcCeeecCCchHHHHHHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHHHHHHHHHHHH
Q 047974          107 F-DIFGETGLFNSDFDEWKHQRKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLLKRTTFDFACL  185 (497)
Q Consensus       107 ~-~~~g~~~l~~~~~~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~v~~~  185 (497)
                      . ..+|. |++.++|+.|+++|+++.++|+.+.+..+.+ .+.+. .+.+.+.+.+..+.+..+|+.+.+..+++++++.
T Consensus       104 ~~~~~~~-~l~~~~g~~w~~~Rk~~~~~f~~~~l~~~~~-~i~~~-~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~  180 (482)
T PTZ00404        104 KHGTFYH-GIVTSSGEYWKRNREIVGKAMRKTNLKHIYD-LLDDQ-VDVLIESMKKIESSGETFEPRYYLTKFTMSAMFK  180 (482)
T ss_pred             eeeccCC-ceeccChHHHHHHHHHHHHHHhhhccccHHH-HHHHH-HHHHHHHHHHHHhcCCccCHHHHHHHHHHHHHHH
Confidence            2 33466 8999999999999999999999999988754 45555 4556666655444556799999999999999999


Q ss_pred             hhcCCCCCCCCCC--CCCCChHHHHHHHHHHH----------HHHHH----HHHHHhHHHHHHHHHHHHHHHHHHHHHhc
Q 047974          186 IATGHNPNSLSVG--FPEMGFPDAVDDACEAI----------LIRHL----EKKLANGWRTIDQFWEKQKSMKQEEIEKG  249 (497)
Q Consensus       186 ~~fG~~~~~~~~~--~~~~~~~~~~~~~~~~~----------~~~~~----~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  249 (497)
                      ++||.+++..++.  .....+.+.+.......          .....    .....++.+.+.+++.+.++++++..+. 
T Consensus       181 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-  259 (482)
T PTZ00404        181 YIFNEDISFDEDIHNGKLAELMGPMEQVFKDLGSGSLFDVIEITQPLYYQYLEHTDKNFKKIKKFIKEKYHEHLKTIDP-  259 (482)
T ss_pred             HHhccccccccccchhHHHHHHHHHHHHHHHhCCCchhhhhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC-
Confidence            9999987643210  01123344333332210          00111    1122344555666666665554432110 


Q ss_pred             cccccccchhhHHHHHhcCCCCCCCCCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhhcccCC
Q 047974          250 MEAKEDEGIYSLLNCYLSGHEVTGPTPAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRNFSQEG  329 (497)
Q Consensus       250 ~~~~~~~~~~dll~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~  329 (497)
                            ....|+++.+++..++. ...+.++++++++.+++||+|||+.+++|++++|++||++|+|+++|++++++   
T Consensus       260 ------~~~~dll~~ll~~~~~~-~~~~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~v~~---  329 (482)
T PTZ00404        260 ------EVPRDLLDLLIKEYGTN-TDDDILSILATILDFFLAGVDTSATSLEWMVLMLCNYPEIQEKAYNEIKSTVN---  329 (482)
T ss_pred             ------CCcccHHHHHHHHhccC-CcccHHHHHHHHHHHHHhccchHHHHHHHHHHHHHcCcHHHHHHHHHHHHHhc---
Confidence                  23468999999874321 11233458899999999999999999999999999999999999999999984   


Q ss_pred             CCCCCCCChhhhhcchhHHHHHHHhhcCCCCCCc-ccccccCCCcccCCeeeCCCcEEEEeccccccCCCCCCCCCCCCC
Q 047974          330 FNKPPLVRLNELNKLVYLHAALCETLRLYPPVPF-EIRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWGEDCREFK  408 (497)
Q Consensus       330 ~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~-~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~  408 (497)
                        ++..++.+++++||||+|||+||||++|+++. ..|.+.+|.++.+||.|||||.|+++.+++||||++| +||++|+
T Consensus       330 --~~~~~~~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~~g~~Ip~Gt~V~~~~~a~hrdp~~~-~dP~~F~  406 (482)
T PTZ00404        330 --GRNKVLLSDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIPKDAQILINYYSLGRNEKYF-ENPEQFD  406 (482)
T ss_pred             --CCCCCCccccccChHHHHHHHHHHHhcCCcccccceeccCCEEecCCeEECCCCEEEeeHHHhhCCcccc-CCccccC
Confidence              33467999999999999999999999999997 4687877655548999999999999999999999999 9999999


Q ss_pred             CCCccCCCCCccCCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCccc--eeeeeEEEeecCceEEEE
Q 047974          409 PERWITEDGRIRHEPPHKFFSFNAGPRICIGKDIAFTLMKATAASIIHNYDVQVVKNHPV--TYNLSIGFRMKHGLLARV  486 (497)
Q Consensus       409 P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~--~~~~~~~~~~~~~~~~~~  486 (497)
                      ||||++..      .+..|+|||+|+|.|+|++||++|++++++.|+++|++++.++.+.  ....+.+.. +.++++++
T Consensus       407 PeRwl~~~------~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~  479 (482)
T PTZ00404        407 PSRFLNPD------SNDAFMPFSIGPRNCVGQQFAQDELYLAFSNIILNFKLKSIDGKKIDETEEYGLTLK-PNKFKVLL  479 (482)
T ss_pred             ccccCCCC------CCCceeccCCCCCCCccHHHHHHHHHHHHHHHHHhcEEecCCCCCCCcccccceeec-CCCceeee
Confidence            99998642      4568999999999999999999999999999999999998765433  223456666 57899999


Q ss_pred             Eec
Q 047974          487 SKR  489 (497)
Q Consensus       487 ~~r  489 (497)
                      ++|
T Consensus       480 ~~R  482 (482)
T PTZ00404        480 EKR  482 (482)
T ss_pred             ecC
Confidence            987


No 11 
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=5.8e-72  Score=507.59  Aligned_cols=442  Identities=26%  Similarity=0.389  Sum_probs=371.6

Q ss_pred             CCCCcccchhhHHHHhh-ccchHHHHHHHHHHHhCCeeEEeeec-ccCcceEEEcChhhHHHhhhcCCccccCCc-cccc
Q 047974           29 PTPWNLPLLGMLASVIL-NINQLHDKVAQILEKTKGSFMIKGSW-VAQYDMFLTSDPANVQHIMSTNFSKYHKGS-EGRK  105 (497)
Q Consensus        29 pgp~~~P~~G~~~~~~~-~~~~~~~~~~~~~~k~g~v~~~~~~~-~~~~~~v~v~~p~~v~~il~~~~~~~~~~~-~~~~  105 (497)
                      |+|+++|++|.+..+.. ...++|+....++++||+||..   . +|+.+.|++.+|++++.+++++ ..++-++ .+..
T Consensus        53 P~p~~~~~l~~l~~~~~~~~~~lh~~~~~~~~~YG~I~~~---~~~G~~~~V~v~~p~d~E~v~r~E-G~~P~Rp~~~~~  128 (519)
T KOG0159|consen   53 PGPKGLPFLGLLWIWRAGGATKLHQHIVQLHQKYGPIFRE---GMLGRVDLVHVYNPDDVEKVFRNE-GKYPFRPLLIEP  128 (519)
T ss_pred             CCCCCccHHHHHHHHHhhhhhHHHHHHHHHHHHcCceeee---ccCCCCCeEEeeCHHHHHHHHhcC-CCCCCcccccch
Confidence            68999999999885422 2356899999999999999999   5 7999999999999999999987 5566664 2211


Q ss_pred             ---cccccC-CcCeeecCCchHHHHHHhhhcc-cCHHHHHHHHHHHhHHHHHhhHHHHhhhhcC---CCceeeHHHHHHH
Q 047974          106 ---RFDIFG-ETGLFNSDFDEWKHQRKLARAF-INHQKFQQLMAKIVPEMIERGLIPVLDHVSE---EKMLVDFQDLLKR  177 (497)
Q Consensus       106 ---~~~~~g-~~~l~~~~~~~w~~~R~~~~~~-f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~---~~~~vdl~~~~~~  177 (497)
                         ....++ ..|++..+|++|.+.|..+++. ++++.++.+++. + +.+.+.+++.++...+   ...+.|+.+.+.+
T Consensus       129 w~~~rd~~~~~~Gl~~~~G~~W~~~Rs~ln~~ll~P~~v~~yl~~-l-~~V~~DF~~~l~~~r~~~~~~~~~D~~~~l~~  206 (519)
T KOG0159|consen  129 WVAYRDFRGGVCGLFLLEGPEWQRLRSALNPLLLQPQAVRRYLPQ-L-NAVSDDFVERLRAQRDPERGELVPDFAQELYR  206 (519)
T ss_pred             hhhhHHhhccCCCcccCCCHHHHHHHHHhchhhcCHHHHHHHhhH-H-HHHHHHHHHHHHHHhcccccccchhHHHHHHH
Confidence               113343 3599999999999999999996 789999998875 3 4456777777776543   3457899999999


Q ss_pred             HHHHHHHHhhcCCCCCCCCCCC--CCCChHHHHHHHHHHH--------HHHHH----HHHHHhHHHHHHHHHHHHHHHHH
Q 047974          178 TTFDFACLIATGHNPNSLSVGF--PEMGFPDAVDDACEAI--------LIRHL----EKKLANGWRTIDQFWEKQKSMKQ  243 (497)
Q Consensus       178 ~~~~v~~~~~fG~~~~~~~~~~--~~~~~~~~~~~~~~~~--------~~~~~----~~~~~~~~~~~~~~~~~~i~~~~  243 (497)
                      ++++.+|.++||.+++++....  ..+.|.+++..++...        +++++    +++..++++.+.++..++|+...
T Consensus       207 wslEsi~~V~l~~rlG~L~~~~~~~a~~fi~ai~~~F~~s~~l~~~p~l~r~~~t~~wk~~~~~~D~i~~~~~~~Id~~l  286 (519)
T KOG0159|consen  207 WSLESICLVLLGTRLGLLGESPPSEAQQFIDAIKKMFESSAQLMLMPSLWRYFPTKVWKDFVRAWDQIFDVGDKYIDNAL  286 (519)
T ss_pred             HHHHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHHhHHHHHhcchHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999987642  2345666666665443        22333    88999999999999999999999


Q ss_pred             HHHHhccccccccchhhHHHHHhcCCCCCCCCCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHh
Q 047974          244 EEIEKGMEAKEDEGIYSLLNCYLSGHEVTGPTPAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKR  323 (497)
Q Consensus       244 ~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~  323 (497)
                      +..+...+..  .+..+.+..++...+     ++.+++..++++++.||.|||+.++.|+||+|++||++|++|++|+.+
T Consensus       287 ~~l~~~~~~~--~~~~~~l~~~L~~~~-----l~~k~~~~~~~dll~aGvDTTs~tl~~~Ly~LarnP~~Q~~L~~Ei~~  359 (519)
T KOG0159|consen  287 EELEKQDSAG--SEYTGSLLELLLRKE-----LSRKDAKANVMDLLAAGVDTTSNTLLWALYELARNPEVQQRLREEILA  359 (519)
T ss_pred             HHHHhccccc--cchhHHHHHHHHHcc-----CCHHHHHHHHHHHHHHhccchHHHHHHHHHHHhcChHHHHHHHHHHHh
Confidence            8876542110  133455555555544     789999999999999999999999999999999999999999999999


Q ss_pred             hcccCCCCCCCCCChhhhhcchhHHHHHHHhhcCCCCCCcccccccCCCcccCCeeeCCCcEEEEeccccccCCCCCCCC
Q 047974          324 NFSQEGFNKPPLVRLNELNKLVYLHAALCETLRLYPPVPFEIRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWGED  403 (497)
Q Consensus       324 ~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~  403 (497)
                      +..    .++..++.+++.+||||+||||||+||||.+|++.|...+|.++ +||.|||||.|.++.+.+.+||++| ++
T Consensus       360 ~~p----~~~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~~~R~l~~D~vL-~gY~vPagT~V~l~~~~~~r~~~~F-~~  433 (519)
T KOG0159|consen  360 VLP----SGNSELTQKALTNMPYLRACIKETLRLYPVVPGNGRVLPKDLVL-SGYHVPAGTLVVLFLYVLGRNPAYF-PD  433 (519)
T ss_pred             hCC----CcccccchHHHhhCHHHHHHHHhhhceeccccccccccchhcee-ccceecCCCeEEEeehhhccChhhC-CC
Confidence            985    33578899999999999999999999999999999998888777 9999999999999999999999999 99


Q ss_pred             CCCCCCCCccCCCCCccCCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCccceeeeeEEEeecCceE
Q 047974          404 CREFKPERWITEDGRIRHEPPHKFFSFNAGPRICIGKDIAFTLMKATAASIIHNYDVQVVKNHPVTYNLSIGFRMKHGLL  483 (497)
Q Consensus       404 p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~  483 (497)
                      |++|+||||++++.  +..+++.++|||.|+|+|+|+++|++|+.+.|+.++++|+++..++.+++....+++.|..++.
T Consensus       434 p~~F~PeRWL~~~~--~~~~pF~~LPFGfG~R~C~GRRiAElEl~llLarllr~f~V~~~~~~pv~~~~~~il~P~~~l~  511 (519)
T KOG0159|consen  434 PEEFLPERWLKPST--KTIHPFASLPFGFGPRMCLGRRIAELELHLLLARLLRNFKVEFLHEEPVEYVYRFILVPNRPLR  511 (519)
T ss_pred             ccccChhhhccccc--CCCCCceecCCCCCccccchHHHHHHHHHHHHHHHHHhcceeecCCCCccceeEEEEcCCCCcc
Confidence            99999999998763  3347899999999999999999999999999999999999999988888888999999999999


Q ss_pred             EEEEecCC
Q 047974          484 ARVSKRSA  491 (497)
Q Consensus       484 ~~~~~r~~  491 (497)
                      ++|++|..
T Consensus       512 f~f~~r~~  519 (519)
T KOG0159|consen  512 FKFRPRNE  519 (519)
T ss_pred             eeeeeCCC
Confidence            99999863


No 12 
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=1.8e-72  Score=553.18  Aligned_cols=441  Identities=18%  Similarity=0.281  Sum_probs=338.2

Q ss_pred             ccCCCCCcccchhhHHHHhhccchHHHHHHHHHHHhCCeeEEeeecccCcceEEEcChhhHHHhhhcCCccccCCccccc
Q 047974           26 KINPTPWNLPLLGMLASVILNINQLHDKVAQILEKTKGSFMIKGSWVAQYDMFLTSDPANVQHIMSTNFSKYHKGSEGRK  105 (497)
Q Consensus        26 ~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~k~g~v~~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~~~~~~~~~  105 (497)
                      ++||||+++|++|++.++..   ..+.++.+++++||++|++   ++|+.++|+++||+.+++++.++...|.+++....
T Consensus        36 ~~ppgp~~~Pl~G~l~~~~~---~~~~~~~~~~~~yG~i~~~---~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~  109 (516)
T PLN02183         36 PYPPGPKGLPIIGNMLMMDQ---LTHRGLANLAKQYGGLFHM---RMGYLHMVAVSSPEVARQVLQVQDSVFSNRPANIA  109 (516)
T ss_pred             CCCcCCCCCCeeccHHhcCC---cchHHHHHHHHHhCCeeEE---EeCCcceEEeCCHHHHHHHHHhhhhhhcCCCcccc
Confidence            38999999999999987632   2466889999999999999   99999999999999999999987666776654322


Q ss_pred             cccccC--CcCeeecCCchHHHHHHh-hhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHHHHHHHHH
Q 047974          106 RFDIFG--ETGLFNSDFDEWKHQRKL-ARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLLKRTTFDF  182 (497)
Q Consensus       106 ~~~~~g--~~~l~~~~~~~w~~~R~~-~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~v  182 (497)
                      .....+  ..+++..+|+.|+++|++ +.++|+.+.++.+. .+. ++ .+.+.+.+..  ..++++|+.+.+..++.++
T Consensus       110 ~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~-~~~-~~-~~~~~~~l~~--~~~~~v~~~~~~~~~~~~v  184 (516)
T PLN02183        110 ISYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWA-SVR-DE-VDSMVRSVSS--NIGKPVNIGELIFTLTRNI  184 (516)
T ss_pred             hhccccCCCceEeCCCChHHHHHHHHHHHHhcCHHHHHHHH-HHH-HH-HHHHHHHHHh--cCCCcEeHHHHHHHHHHHH
Confidence            222221  226778899999999998 57889998888764 333 44 3445555543  2356899999999999999


Q ss_pred             HHHhhcCCCCCCCCCCCCCCChHHHHHHHHHH----------HHHHH-----HHHHHHhHHHHHHHHHHHHHHHHHHHHH
Q 047974          183 ACLIATGHNPNSLSVGFPEMGFPDAVDDACEA----------ILIRH-----LEKKLANGWRTIDQFWEKQKSMKQEEIE  247 (497)
Q Consensus       183 ~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~~  247 (497)
                      ++.++||...+..     ...+.+.+..+...          ++..+     ..++..++.+.+.+++.+.|+++++...
T Consensus       185 i~~~~fG~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  259 (516)
T PLN02183        185 TYRAAFGSSSNEG-----QDEFIKILQEFSKLFGAFNVADFIPWLGWIDPQGLNKRLVKARKSLDGFIDDIIDDHIQKRK  259 (516)
T ss_pred             HHhHhhcCcccch-----HHHHHHHHHHHHHHhCCccHHHhcchhHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            9999999876421     12244444332211          11111     1345556777888888888888766443


Q ss_pred             hcccc-ccccchhhHHHHHhcCCCC-----------CCCCCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHH
Q 047974          248 KGMEA-KEDEGIYSLLNCYLSGHEV-----------TGPTPAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAET  315 (497)
Q Consensus       248 ~~~~~-~~~~~~~dll~~ll~~~~~-----------~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~  315 (497)
                      .+... .......|+++.++....+           .+..++++++.+++..+++||+|||+.+++|++++|++||++|+
T Consensus       260 ~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~La~~Pevq~  339 (516)
T PLN02183        260 NQNADNDSEEAETDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEWAMAELMKSPEDLK  339 (516)
T ss_pred             ccccccccccccccHHHHHHHhhhccccccccccccccCCCCHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHhCHHHHH
Confidence            22110 0011346899999874321           12358999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhcccCCCCCCCCCChhhhhcchhHHHHHHHhhcCCCCCCcccccccCCCcccCCeeeCCCcEEEEecccccc
Q 047974          316 KIREELKRNFSQEGFNKPPLVRLNELNKLVYLHAALCETLRLYPPVPFEIRIPLQPDVLPSGHQVNQNTHVLISAYSMAR  395 (497)
Q Consensus       316 ~l~~Ei~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~  395 (497)
                      |+++|++++++     .++.++.+++++||||+|||+||||++|++|+..|++.+|+++ +||.|||||.|+++.+++||
T Consensus       340 kl~~Ei~~v~~-----~~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~~r~~~~d~~l-~g~~IPkGt~V~~~~~~~hr  413 (516)
T PLN02183        340 RVQQELADVVG-----LNRRVEESDLEKLTYLKCTLKETLRLHPPIPLLLHETAEDAEV-AGYFIPKRSRVMINAWAIGR  413 (516)
T ss_pred             HHHHHHHHHcC-----CCCCCCHHHhccChHHHHHHHHHhccCCCccceeeeccCceeE-CCEEECCCCEEEEehhhhcC
Confidence            99999999984     2356899999999999999999999999999988888877666 99999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCccCCCCCccCCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCcc---ce--e
Q 047974          396 MTSVWGEDCREFKPERWITEDGRIRHEPPHKFFSFNAGPRICIGKDIAFTLMKATAASIIHNYDVQVVKNHP---VT--Y  470 (497)
Q Consensus       396 d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~---~~--~  470 (497)
                      ||++| +||++|+||||++++.+........|+|||+|+|+|+|++||++|+++++|+|+++|++++.++..   ..  .
T Consensus       414 d~~~~-~dP~~F~PeRfl~~~~~~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ll~~f~~~~~~~~~~~~~~~~~  492 (516)
T PLN02183        414 DKNSW-EDPDTFKPSRFLKPGVPDFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPDGMKPSELDMND  492 (516)
T ss_pred             Ccccc-CCccccCchhhCCCCCccccCCcceecCCCCCCCCCCChHHHHHHHHHHHHHHHheeEEEcCCCCCCCCCChhh
Confidence            99999 999999999999754322122456899999999999999999999999999999999999877532   21  1


Q ss_pred             eeeEEEeecCceEEEEEec
Q 047974          471 NLSIGFRMKHGLLARVSKR  489 (497)
Q Consensus       471 ~~~~~~~~~~~~~~~~~~r  489 (497)
                      ..+.+..++.++.+.+++|
T Consensus       493 ~~~~~~~~~~~~~~~~~~r  511 (516)
T PLN02183        493 VFGLTAPRATRLVAVPTYR  511 (516)
T ss_pred             ccccccccCCCcEEEeecC
Confidence            2233333444666777766


No 13 
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=4.4e-72  Score=550.48  Aligned_cols=443  Identities=19%  Similarity=0.280  Sum_probs=346.7

Q ss_pred             cCCCCCcccchhhHHHHhhccchHHHHHHHHHHHhCCeeEEeeecccCcceEEEcChhhHHHhhhcCCccccCCcccccc
Q 047974           27 INPTPWNLPLLGMLASVILNINQLHDKVAQILEKTKGSFMIKGSWVAQYDMFLTSDPANVQHIMSTNFSKYHKGSEGRKR  106 (497)
Q Consensus        27 ~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~k~g~v~~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~~~~~~~~~~  106 (497)
                      +||||+++|++||+.++..+   ++.++.+++++||++|++   ++|+.++++++||+++++++.++...|.+++.....
T Consensus        35 ~pPgp~~~P~iG~~~~~~~~---~~~~~~~~~~~yG~i~~~---~~g~~~~vvv~~p~~~~~il~~~~~~f~~r~~~~~~  108 (517)
T PLN02687         35 LPPGPRGWPVLGNLPQLGPK---PHHTMAALAKTYGPLFRL---RFGFVDVVVAASASVAAQFLRTHDANFSNRPPNSGA  108 (517)
T ss_pred             CCccCCCCCccccHHhcCCc---hhHHHHHHHHHhCCeeEE---ecCCceEEEeCCHHHHHHHHHhcchhhhcCCCccch
Confidence            78999999999999888543   788999999999999999   999999999999999999998876778776544322


Q ss_pred             cc--ccCCcCeeecCCchHHHHHHhhh-cccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHHHHHHHHHH
Q 047974          107 FD--IFGETGLFNSDFDEWKHQRKLAR-AFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLLKRTTFDFA  183 (497)
Q Consensus       107 ~~--~~g~~~l~~~~~~~w~~~R~~~~-~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~v~  183 (497)
                      ..  ..+..+++..+|+.|+++||++. +.|+.++++.+.+ .+.+. .+.+...+.+.. +++++|+.+.+..++++++
T Consensus       109 ~~~~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~-~i~~~-~~~l~~~l~~~~-~~~~vd~~~~~~~~t~dvi  185 (517)
T PLN02687        109 EHMAYNYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFRH-VREEE-VALLVRELARQH-GTAPVNLGQLVNVCTTNAL  185 (517)
T ss_pred             hhhccCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhHH-HHHHH-HHHHHHHHHHhc-CCCceeHHHHHHHHHHHHH
Confidence            11  12332566677999999999998 7899999988754 45555 455556665432 3468999999999999999


Q ss_pred             HHhhcCCCCCCCCCCCCCCChHHHHHHHHHH----------HHHHHH-----HHHHHhHHHHHHHHHHHHHHHHHHHHHh
Q 047974          184 CLIATGHNPNSLSVGFPEMGFPDAVDDACEA----------ILIRHL-----EKKLANGWRTIDQFWEKQKSMKQEEIEK  248 (497)
Q Consensus       184 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~-----~~~~~~~~~~~~~~~~~~i~~~~~~~~~  248 (497)
                      +.++||.++...+.+.....+.+.+..+...          +..+++     .++..++.+.+.+++.+.++++++....
T Consensus       186 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~  265 (517)
T PLN02687        186 GRAMVGRRVFAGDGDEKAREFKEMVVELMQLAGVFNVGDFVPALRWLDLQGVVGKMKRLHRRFDAMMNGIIEEHKAAGQT  265 (517)
T ss_pred             HHHHhCccccccCCcchHHHHHHHHHHHHHHhccCcHHHHhhhHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence            9999999875443222223344444443321          111111     2345566777888888888887765321


Q ss_pred             ccccccccchhhHHHHHhcCCCC-----CCCCCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHh
Q 047974          249 GMEAKEDEGIYSLLNCYLSGHEV-----TGPTPAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKR  323 (497)
Q Consensus       249 ~~~~~~~~~~~dll~~ll~~~~~-----~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~  323 (497)
                      +     +....|+++.+++..++     ++..++++++.+++..+++||+|||+++++|++++|++||++|+|+++|+++
T Consensus       266 ~-----~~~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~eTta~~l~~~l~~L~~~P~~~~kl~~Ei~~  340 (517)
T PLN02687        266 G-----SEEHKDLLSTLLALKREQQADGEGGRITDTEIKALLLNLFTAGTDTTSSTVEWAIAELIRHPDILKKAQEELDA  340 (517)
T ss_pred             c-----CcccccHHHHHHHhhccccccccccCCCHHHHHHHHHHHhccccCchHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence            1     12346899999986432     2346999999999999999999999999999999999999999999999999


Q ss_pred             hcccCCCCCCCCCChhhhhcchhHHHHHHHhhcCCCCCCcc-cccccCCCcccCCeeeCCCcEEEEeccccccCCCCCCC
Q 047974          324 NFSQEGFNKPPLVRLNELNKLVYLHAALCETLRLYPPVPFE-IRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWGE  402 (497)
Q Consensus       324 ~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~-~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~  402 (497)
                      +.+     .++.++.+++++||||+|||+|+||++|+++.. .|.+.+|.++ +||.|||||.|.++.+++||||++| +
T Consensus       341 ~~~-----~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d~~~-~g~~ip~Gt~v~~~~~~~h~d~~~~-~  413 (517)
T PLN02687        341 VVG-----RDRLVSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECEI-NGYHIPKGATLLVNVWAIARDPEQW-P  413 (517)
T ss_pred             HcC-----CCCCCCHHHhhhCHHHHHHHHHHHccCCCccccccccCCCCeeE-CCEEECCCCEEEEecHHhcCCcccC-C
Confidence            984     345689999999999999999999999999974 6777666555 9999999999999999999999999 9


Q ss_pred             CCCCCCCCCccCCCCCc---cCCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCcc---ce--eeeeE
Q 047974          403 DCREFKPERWITEDGRI---RHEPPHKFFSFNAGPRICIGKDIAFTLMKATAASIIHNYDVQVVKNHP---VT--YNLSI  474 (497)
Q Consensus       403 ~p~~F~P~Rfl~~~~~~---~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~---~~--~~~~~  474 (497)
                      ||++|+||||++++...   ....+..|+|||+|+|.|+|++||++|+++++++|+++|++++.++..   ..  .....
T Consensus       414 dp~~F~PeRfl~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~  493 (517)
T PLN02687        414 DPLEFRPDRFLPGGEHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLLTATLVHAFDWELADGQTPDKLNMEEAYGL  493 (517)
T ss_pred             CcccCCchhcCCCCCccccccCCCceeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcceecCCCCCcccCCcccccce
Confidence            99999999999753211   112356899999999999999999999999999999999999986532   21  12344


Q ss_pred             EEeecCceEEEEEecC
Q 047974          475 GFRMKHGLLARVSKRS  490 (497)
Q Consensus       475 ~~~~~~~~~~~~~~r~  490 (497)
                      +..+..++.+++++|.
T Consensus       494 ~~~~~~~~~~~~~~R~  509 (517)
T PLN02687        494 TLQRAVPLMVHPRPRL  509 (517)
T ss_pred             eeecCCCeEEeeccCC
Confidence            5555667888888885


No 14 
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=5.3e-72  Score=551.14  Aligned_cols=471  Identities=20%  Similarity=0.296  Sum_probs=355.8

Q ss_pred             CcCCCChhhHHHHHHHHHhhhhh------ccCCCCCcccchhhHHHHhhccchHHHHHHHHHHHhCCeeEEeeecccCcc
Q 047974            3 DSLAFPQYFIFPIIFFLFLHHFR------KINPTPWNLPLLGMLASVILNINQLHDKVAQILEKTKGSFMIKGSWVAQYD   76 (497)
Q Consensus         3 ~~l~~~~~~~~~~~~~~~~~~~~------~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~k~g~v~~~~~~~~~~~~   76 (497)
                      .+++.+++++.+++++++++..+      +.||||+++|++||+.++..   .++.++.++++|||++|++   ++++.+
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ppgp~~~pl~G~~~~~~~---~~~~~~~~~~~kyG~v~~~---~~g~~~   76 (514)
T PLN03112          3 SFLLSLLFSVLIFNVLIWRWLNASMRKSLRLPPGPPRWPIVGNLLQLGP---LPHRDLASLCKKYGPLVYL---RLGSVD   76 (514)
T ss_pred             hhHHHHHHHHHHHHHHHHHHccccccCCCCCccCCCCCCeeeeHHhcCC---chHHHHHHHHHHhCCeEEE---EecCcc
Confidence            34444444444444444433221      27899999999999988743   3678899999999999998   889999


Q ss_pred             eEEEcChhhHHHhhhcCCccccCCccccccc-cccCCc-CeeecCCchHHHHHHhhh-cccCHHHHHHHHHHHhHHHHHh
Q 047974           77 MFLTSDPANVQHIMSTNFSKYHKGSEGRKRF-DIFGET-GLFNSDFDEWKHQRKLAR-AFINHQKFQQLMAKIVPEMIER  153 (497)
Q Consensus        77 ~v~v~~p~~v~~il~~~~~~~~~~~~~~~~~-~~~g~~-~l~~~~~~~w~~~R~~~~-~~f~~~~l~~~~~~~~~~~~~~  153 (497)
                      +++++||+.+++++.++...|.+++...... ..+|.. +++..+|+.|+++||.+. +.|+.++++.+.+. +.+. .+
T Consensus        77 ~v~v~dpe~~~~vl~~~~~~f~~~~~~~~~~~~~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~~-~~~~-~~  154 (514)
T PLN03112         77 AITTDDPELIREILLRQDDVFASRPRTLAAVHLAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLESFAKH-RAEE-AR  154 (514)
T ss_pred             EEEECCHHHHHHHHHhCCcccccCCCcccceeeccCCCceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhhHH-HHHH-HH
Confidence            9999999999999987767788776553332 334431 456678999999999965 57999999887754 4444 34


Q ss_pred             hHHHHhhhhcCCCceeeHHHHHHHHHHHHHHHhhcCCCCCCCCCC--CCCCChHHHHHHHHHH----------HHHHHH-
Q 047974          154 GLIPVLDHVSEEKMLVDFQDLLKRTTFDFACLIATGHNPNSLSVG--FPEMGFPDAVDDACEA----------ILIRHL-  220 (497)
Q Consensus       154 ~l~~~l~~~~~~~~~vdl~~~~~~~~~~v~~~~~fG~~~~~~~~~--~~~~~~~~~~~~~~~~----------~~~~~~-  220 (497)
                      .+.+.+.+....++.+|+.+.+..+++++++.++||.++......  .....+.+.+..+...          +.++++ 
T Consensus       155 ~lv~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~  234 (514)
T PLN03112        155 HLIQDVWEAAQTGKPVNLREVLGAFSMNNVTRMLLGKQYFGAESAGPKEAMEFMHITHELFRLLGVIYLGDYLPAWRWLD  234 (514)
T ss_pred             HHHHHHHHhhccCCeeeHHHHHHHHHHHHHHHHHcCCccccccccchHHHHHHHHHHHHHHHHcCCCcHHHhChHHHhcC
Confidence            444444333334568999999999999999999999986432210  1112233433333211          111111 


Q ss_pred             ----HHHHHhHHHHHHHHHHHHHHHHHHHHHhccccccccchhhHHHHHhcCCCCCC-CCCchHHHHHHHHHHHHhcCcc
Q 047974          221 ----EKKLANGWRTIDQFWEKQKSMKQEEIEKGMEAKEDEGIYSLLNCYLSGHEVTG-PTPAEKVMRDNITALIFATEGT  295 (497)
Q Consensus       221 ----~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~-~~l~~~~i~~~~~~~~~ag~~t  295 (497)
                          .++..++.+.+.+++++.++++++..+....   .....|+++.+++..++++ ..++++++.+++..+++||+||
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~---~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~AG~dT  311 (514)
T PLN03112        235 PYGCEKKMREVEKRVDEFHDKIIDEHRRARSGKLP---GGKDMDFVDVLLSLPGENGKEHMDDVEIKALMQDMIAAATDT  311 (514)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc---CCccchHHHHHHHhhccccccCCCHHHHHHHHHHHhcccccc
Confidence                2445667778888888888887664322100   0234689999998643332 3489999999999999999999


Q ss_pred             hHHHHHHHHHHHhcChHHHHHHHHHHHhhcccCCCCCCCCCChhhhhcchhHHHHHHHhhcCCCCCCcc-cccccCCCcc
Q 047974          296 TSIALTWFFWLVSKNPFAETKIREELKRNFSQEGFNKPPLVRLNELNKLVYLHAALCETLRLYPPVPFE-IRIPLQPDVL  374 (497)
Q Consensus       296 t~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~-~r~~~~~~~~  374 (497)
                      |+++++|++++|++||++|+|+++||+++++     .++.++.+++++|||++|||+|++|++|++++. .|.+.+|.++
T Consensus       312 Ta~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~-----~~~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~i  386 (514)
T PLN03112        312 SAVTNEWAMAEVIKNPRVLRKIQEELDSVVG-----RNRMVQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRATTI  386 (514)
T ss_pred             HHHHHHHHHHHHHhChHHHHHHHHHHHHhcC-----CCCcCChhhhccCcHHHHHHHHHhccCCCcccccccccCCCeeE
Confidence            9999999999999999999999999999984     345689999999999999999999999999975 5777776665


Q ss_pred             cCCeeeCCCcEEEEeccccccCCCCCCCCCCCCCCCCccCCCCC---ccCCCCCcccccCCCCCCCcchHHHHHHHHHHH
Q 047974          375 PSGHQVNQNTHVLISAYSMARMTSVWGEDCREFKPERWITEDGR---IRHEPPHKFFSFNAGPRICIGKDIAFTLMKATA  451 (497)
Q Consensus       375 ~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~---~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l  451 (497)
                       +||.|||||.|.++.+++||||++| +||++|+||||.++++.   ........|+|||+|+|.|+|++||++|+++++
T Consensus       387 -~g~~IPkGt~v~~~~~~~h~d~~~~-~dP~~F~PeRf~~~~~~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~l  464 (514)
T PLN03112        387 -NGYYIPAKTRVFINTHGLGRNTKIW-DDVEEFRPERHWPAEGSRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLMAL  464 (514)
T ss_pred             -cCEEeCCCCEEEEehHHhhCCcccC-CChhhcCCcccCCCCCCccccccCCCcceeCCCCCCCCCCcHHHHHHHHHHHH
Confidence             9999999999999999999999999 99999999998764321   111235689999999999999999999999999


Q ss_pred             HHHHhhceEEeecCc---cc--eeeeeEEEeecCceEEEEEecCC
Q 047974          452 ASIIHNYDVQVVKNH---PV--TYNLSIGFRMKHGLLARVSKRSA  491 (497)
Q Consensus       452 ~~ll~~f~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~~~r~~  491 (497)
                      +.|+++|++++.++.   +.  ....++++.+++++.+++.||..
T Consensus       465 a~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  509 (514)
T PLN03112        465 ARLFHCFDWSPPDGLRPEDIDTQEVYGMTMPKAKPLRAVATPRLA  509 (514)
T ss_pred             HHHHHheeeecCCCCCcccCCCccccCcccccCCCeEEEeecCCc
Confidence            999999999987543   11  12234555667799999999974


No 15 
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=5.2e-72  Score=546.46  Aligned_cols=444  Identities=19%  Similarity=0.309  Sum_probs=346.9

Q ss_pred             hccCCCCCcccchhhHHHHhhccchHHHHHHHHHHHhCCeeEEeeecccCcceEEEcChhhHHHhhhcCCccccCCcccc
Q 047974           25 RKINPTPWNLPLLGMLASVILNINQLHDKVAQILEKTKGSFMIKGSWVAQYDMFLTSDPANVQHIMSTNFSKYHKGSEGR  104 (497)
Q Consensus        25 ~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~k~g~v~~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~~~~~~~~  104 (497)
                      .++||||+++|++||++.+..   .++.++.+++++||++|++   ++|+.++|+++||+++++++.++...|.+++...
T Consensus        30 ~~~pPgp~~~Pl~G~l~~~~~---~~~~~~~~~~~~yG~i~~~---~~g~~~~vvv~dpe~~~~vl~~~~~~f~~r~~~~  103 (504)
T PLN00110         30 RKLPPGPRGWPLLGALPLLGN---MPHVALAKMAKRYGPVMFL---KMGTNSMVVASTPEAARAFLKTLDINFSNRPPNA  103 (504)
T ss_pred             CCCcccCCCCCeeechhhcCC---chHHHHHHHHHHhCCeEEE---EcCCccEEEECCHHHHHHHHHhcchhhcCCCCcc
Confidence            348999999999999887743   3688999999999999999   9999999999999999999998766787776543


Q ss_pred             ccc-cccC-CcCeeecCCchHHHHHHhhhc-ccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHHHHHHHH
Q 047974          105 KRF-DIFG-ETGLFNSDFDEWKHQRKLARA-FINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLLKRTTFD  181 (497)
Q Consensus       105 ~~~-~~~g-~~~l~~~~~~~w~~~R~~~~~-~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~  181 (497)
                      ... ...| ..+++..+|+.|+++|+.+.+ .|+.++++.+.+. +.+.+ +.+.+.+.+...+++++|+.+.+..++.+
T Consensus       104 ~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~-i~~~~-~~~~~~l~~~~~~g~~~~~~~~~~~~~~~  181 (504)
T PLN00110        104 GATHLAYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWSQV-RTVEL-GHMLRAMLELSQRGEPVVVPEMLTFSMAN  181 (504)
T ss_pred             chhhhccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhhHH-HHHHH-HHHHHHHHHhccCCCcEeHHHHHHHHHHH
Confidence            222 2233 226777889999999999985 7999899887653 44443 33444554444456789999999999999


Q ss_pred             HHHHhhcCCCCCCCCCCCCCCChHHHHHHHHHHH----------HHHHH-----HHHHHhHHHHHHHHHHHHHHHHHHHH
Q 047974          182 FACLIATGHNPNSLSVGFPEMGFPDAVDDACEAI----------LIRHL-----EKKLANGWRTIDQFWEKQKSMKQEEI  246 (497)
Q Consensus       182 v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~-----~~~~~~~~~~~~~~~~~~i~~~~~~~  246 (497)
                      +++.++||.++.... ......+.+.+.......          ...++     .+...+..+.+.+++.+.++++++..
T Consensus       182 vi~~~~fg~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  260 (504)
T PLN00110        182 MIGQVILSRRVFETK-GSESNEFKDMVVELMTTAGYFNIGDFIPSIAWMDIQGIERGMKHLHKKFDKLLTRMIEEHTASA  260 (504)
T ss_pred             HHHHHHhCCcccccC-chhHHHHHHHHHHHHHHhccccHHHHcchHhhhCcchHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            999999999762111 111233444444332211          01111     13344556777778888887766533


Q ss_pred             HhccccccccchhhHHHHHhcCCC-CCCCCCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhhc
Q 047974          247 EKGMEAKEDEGIYSLLNCYLSGHE-VTGPTPAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRNF  325 (497)
Q Consensus       247 ~~~~~~~~~~~~~dll~~ll~~~~-~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~  325 (497)
                      ...      ....|+++.+++..+ +++..++++++.++++.+++||+|||+++++|++++|++||++|+|+++|+++++
T Consensus       261 ~~~------~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~  334 (504)
T PLN00110        261 HER------KGNPDFLDVVMANQENSTGEKLTLTNIKALLLNLFTAGTDTSSSVIEWSLAEMLKNPSILKRAHEEMDQVI  334 (504)
T ss_pred             ccc------ccCCChhhHHhhcccccCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHh
Confidence            211      234689999997643 2345699999999999999999999999999999999999999999999999998


Q ss_pred             ccCCCCCCCCCChhhhhcchhHHHHHHHhhcCCCCCCcc-cccccCCCcccCCeeeCCCcEEEEeccccccCCCCCCCCC
Q 047974          326 SQEGFNKPPLVRLNELNKLVYLHAALCETLRLYPPVPFE-IRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWGEDC  404 (497)
Q Consensus       326 ~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~-~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p  404 (497)
                      +     .+..++.+++++|||++|||+||||++|++++. .|.+.+|.++ +||.|||||.|+++.+++|+||++| +||
T Consensus       335 ~-----~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~-~g~~Ip~Gt~V~~~~~~~h~d~~~~-~dP  407 (504)
T PLN00110        335 G-----RNRRLVESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEV-NGYYIPKNTRLSVNIWAIGRDPDVW-ENP  407 (504)
T ss_pred             C-----CCCCCCHHHhhcChHHHHHHHHHhcCCCCcccccccccCCCeee-CCEEECCCCEEEEeHHHhcCChhhc-CCc
Confidence            4     345689999999999999999999999999984 5777666555 9999999999999999999999999 999


Q ss_pred             CCCCCCCccCCCCCccC--CCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCccce--eeeeEEEeecC
Q 047974          405 REFKPERWITEDGRIRH--EPPHKFFSFNAGPRICIGKDIAFTLMKATAASIIHNYDVQVVKNHPVT--YNLSIGFRMKH  480 (497)
Q Consensus       405 ~~F~P~Rfl~~~~~~~~--~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~--~~~~~~~~~~~  480 (497)
                      ++|+||||++++.....  .....|+|||+|+|.|+|++||++|++++++.|+++|++++.++.+..  ...+.++.|+.
T Consensus       408 ~~F~PeRfl~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~  487 (504)
T PLN00110        408 EEFRPERFLSEKNAKIDPRGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVHSFDWKLPDGVELNMDEAFGLALQKAV  487 (504)
T ss_pred             ccCCcccccCCCCcccccCCCeeeEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhceeecCCCCccCcccccccccccCC
Confidence            99999999965322111  123579999999999999999999999999999999999998764432  23556778888


Q ss_pred             ceEEEEEecC
Q 047974          481 GLLARVSKRS  490 (497)
Q Consensus       481 ~~~~~~~~r~  490 (497)
                      ++++++++|.
T Consensus       488 ~~~~~~~~r~  497 (504)
T PLN00110        488 PLSAMVTPRL  497 (504)
T ss_pred             CceEeeccCC
Confidence            9999999996


No 16 
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=3.3e-71  Score=544.52  Aligned_cols=450  Identities=19%  Similarity=0.245  Sum_probs=345.5

Q ss_pred             ccCCCCCcccchhhHHHHhhccchHHHHHHHHHHHhCCeeEEeeecccCcceEEEcChhhHHHhhhcCCccccCCccccc
Q 047974           26 KINPTPWNLPLLGMLASVILNINQLHDKVAQILEKTKGSFMIKGSWVAQYDMFLTSDPANVQHIMSTNFSKYHKGSEGRK  105 (497)
Q Consensus        26 ~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~k~g~v~~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~~~~~~~~~  105 (497)
                      ++||||+++|++||+..+......++.++.+++++||++|.+   ++|+.+.++++||+++++++.++...|.+++... 
T Consensus        35 ~lpPgp~~~pl~G~l~~~~~~~~~~~~~~~~~~~~yG~i~~~---~~g~~~~vvv~dpe~~~~il~~~~~~f~~rp~~~-  110 (519)
T PLN00168         35 RLPPGPPAVPLLGSLVWLTNSSADVEPLLRRLIARYGPVVSL---RVGSRLSVFVADRRLAHAALVERGAALADRPAVA-  110 (519)
T ss_pred             CCCcCCCCCcccccHHhhccccccHHHHHHHHHHHhCCeEEE---EcCCccEEEECCHHHHHHHHHhcCCccccCCccc-
Confidence            489999999999999876433335788899999999999999   9999999999999999999988767777765532 


Q ss_pred             cccccCC-cCeee--cCCchHHHHHH-hhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHHHHHHHH
Q 047974          106 RFDIFGE-TGLFN--SDFDEWKHQRK-LARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLLKRTTFD  181 (497)
Q Consensus       106 ~~~~~g~-~~l~~--~~~~~w~~~R~-~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~  181 (497)
                      ...++|. .+++.  .+|+.|+++|| +++++|+.++++.+.+ .+.+. .+.+.+.+.+....++.+|+.+.+..++.+
T Consensus       111 ~~~~~~~~~~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~~~~-~~~~~-~~~l~~~l~~~~~~~~~v~~~~~~~~~~~~  188 (519)
T PLN00168        111 SSRLLGESDNTITRSSYGPVWRLLRRNLVAETLHPSRVRLFAP-ARAWV-RRVLVDKLRREAEDAAAPRVVETFQYAMFC  188 (519)
T ss_pred             chhhhccCCCceeCCCCCHHHHHHHHHHHHhccCHHHHHHHHH-HHHHH-HHHHHHHHHHhcCCCCCcCHHHHHHHHHHH
Confidence            1123343 13443  67999999986 7899999999999865 34444 566666776544444568999999999999


Q ss_pred             HHHHhhcCCCCCCCCCCCCCCChHHHHHHHHH---------H--H-HHHHH----HHHHHhHHHHHHHHHHHHHHHHHHH
Q 047974          182 FACLIATGHNPNSLSVGFPEMGFPDAVDDACE---------A--I-LIRHL----EKKLANGWRTIDQFWEKQKSMKQEE  245 (497)
Q Consensus       182 v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~---------~--~-~~~~~----~~~~~~~~~~~~~~~~~~i~~~~~~  245 (497)
                      +++.++||.+++...    ...+.........         .  + +...+    ..+..++.+.+.+++...++++++.
T Consensus       189 ii~~~~fG~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  264 (519)
T PLN00168        189 LLVLMCFGERLDEPA----VRAIAAAQRDWLLYVSKKMSVFAFFPAVTKHLFRGRLQKALALRRRQKELFVPLIDARREY  264 (519)
T ss_pred             HHHHHHcCCCcChhh----HHHHHHHHHHHHHHhcCCCCHHHhCcchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999998875211    1111122111100         0  0 00011    2234467788899999999988764


Q ss_pred             HHhc---c-cc-ccccchhhHHHHHhcCCC--CCCCCCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHH
Q 047974          246 IEKG---M-EA-KEDEGIYSLLNCYLSGHE--VTGPTPAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIR  318 (497)
Q Consensus       246 ~~~~---~-~~-~~~~~~~dll~~ll~~~~--~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~  318 (497)
                      ....   . .. .......|+++.+++...  +.+..++++++.++++.+++||+|||+++++|++++|++||++|+|++
T Consensus       265 ~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~lt~~~i~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~q~kl~  344 (519)
T PLN00168        265 KNHLGQGGEPPKKETTFEHSYVDTLLDIRLPEDGDRALTDDEIVNLCSEFLNAGTDTTSTALQWIMAELVKNPSIQSKLH  344 (519)
T ss_pred             hhhccccCccccccccccccHHHHHHhhhccccccCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhCHHHHHHHH
Confidence            3211   0 00 000124589999987532  223469999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcccCCCCCCCCCChhhhhcchhHHHHHHHhhcCCCCCCcc-cccccCCCcccCCeeeCCCcEEEEeccccccCC
Q 047974          319 EELKRNFSQEGFNKPPLVRLNELNKLVYLHAALCETLRLYPPVPFE-IRIPLQPDVLPSGHQVNQNTHVLISAYSMARMT  397 (497)
Q Consensus       319 ~Ei~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~-~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~  397 (497)
                      +||+++++    +..+.++.+++.+||||+|||+|+||++|+++.. .|.+.+|.++ +||.|||||.|+++++++||||
T Consensus       345 ~Ei~~v~~----~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~-~g~~IpkGt~v~~~~~~~~~d~  419 (519)
T PLN00168        345 DEIKAKTG----DDQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEV-GGYLIPKGATVNFMVAEMGRDE  419 (519)
T ss_pred             HHHHHHhC----CCCCCCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCCCccC-CCEEECCCCEEEEChHHHhcCc
Confidence            99999984    2235689999999999999999999999999886 5777677666 9999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCccCCCCC----ccCCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCcccee--e
Q 047974          398 SVWGEDCREFKPERWITEDGR----IRHEPPHKFFSFNAGPRICIGKDIAFTLMKATAASIIHNYDVQVVKNHPVTY--N  471 (497)
Q Consensus       398 ~~~g~~p~~F~P~Rfl~~~~~----~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~--~  471 (497)
                      ++| +||++|+||||++++..    .....+..|+|||+|+|+|+|++||++|++++++.|+++|+|++.++.+...  .
T Consensus       420 ~~~-~~p~~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~  498 (519)
T PLN00168        420 REW-ERPMEFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLEYFVANMVREFEWKEVPGDEVDFAEK  498 (519)
T ss_pred             ccc-CCccccCcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHHccceeCCCCcCChhhh
Confidence            999 99999999999974321    1112346899999999999999999999999999999999999976543322  2


Q ss_pred             eeEEEeecCceEEEEEecCC
Q 047974          472 LSIGFRMKHGLLARVSKRSA  491 (497)
Q Consensus       472 ~~~~~~~~~~~~~~~~~r~~  491 (497)
                      .+++..+++++++++++|+.
T Consensus       499 ~~~~~~~~~~~~~~~~~R~~  518 (519)
T PLN00168        499 REFTTVMAKPLRARLVPRRT  518 (519)
T ss_pred             ceeEEeecCCcEEEEEeccC
Confidence            34677778899999999874


No 17 
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=3.7e-72  Score=543.91  Aligned_cols=426  Identities=16%  Similarity=0.180  Sum_probs=332.7

Q ss_pred             ccCCCCCcccchhhHHHHhhccchHHHHHHHHHHHhCCeeEEeeecccCcceEEEcChhhHHHhhhcCCccccCCccccc
Q 047974           26 KINPTPWNLPLLGMLASVILNINQLHDKVAQILEKTKGSFMIKGSWVAQYDMFLTSDPANVQHIMSTNFSKYHKGSEGRK  105 (497)
Q Consensus        26 ~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~k~g~v~~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~~~~~~~~~  105 (497)
                      ++||||+++|++||+..+..+   .+.++.+++++||++|++   ++|++++++++||+.+++++.++...+.++.. ..
T Consensus        31 ~~ppgp~~~P~~G~~~~~~~~---~~~~~~~~~~~yG~i~~~---~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~-~~  103 (463)
T PLN02774         31 GLPPGTMGWPLFGETTEFLKQ---GPDFMKNQRLRYGSFFKS---HILGCPTIVSMDPELNRYILMNEGKGLVPGYP-QS  103 (463)
T ss_pred             CCCCCCCCCCchhhHHHHHHh---hHHHHHHHHHHhccCccc---eecCCCeEEEeCHHHHHHHHcCCCCeEEecCC-HH
Confidence            478999999999999888654   466889999999999999   99999999999999999999876555544322 22


Q ss_pred             cccccCCcCeeecCCchHHHHHHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHHHHHHHHHHHH
Q 047974          106 RFDIFGETGLFNSDFDEWKHQRKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLLKRTTFDFACL  185 (497)
Q Consensus       106 ~~~~~g~~~l~~~~~~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~v~~~  185 (497)
                      ...++|..+++..+|+.|+.+|+.+.+.|++..++..+.+.+.+. .+.+.+.+.    .++++|+.+.+..+++++++.
T Consensus       104 ~~~~lg~~~~~~~~g~~w~~~R~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----~~~~v~~~~~~~~~~~~~~~~  178 (463)
T PLN02774        104 MLDILGTCNIAAVHGSTHRYMRGSLLSLISPTMIRDHLLPKIDEF-MRSHLSGWD----GLKTIDIQEKTKEMALLSALK  178 (463)
T ss_pred             HHHHhCccchhhcCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH-HHHHHHhhC----CCCCEEeeHHHHHHHHHHHHH
Confidence            224455547888899999999999999999988876333444444 233333332    235689999999999999999


Q ss_pred             hhcCCCCCCCCCCCCCCChHHHHHHHHHHHH-----HH-HHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccccccccchh
Q 047974          186 IATGHNPNSLSVGFPEMGFPDAVDDACEAIL-----IR-HLEKKLANGWRTIDQFWEKQKSMKQEEIEKGMEAKEDEGIY  259 (497)
Q Consensus       186 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  259 (497)
                      ++||......     ...+.+.+........     .+ ...++..++.+.+.+++.+.++++++..         ...+
T Consensus       179 ~~~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~i~~r~~~~---------~~~~  244 (463)
T PLN02774        179 QIAGTLSKPI-----SEEFKTEFFKLVLGTLSLPIDLPGTNYRSGVQARKNIVRMLRQLIQERRASG---------ETHT  244 (463)
T ss_pred             HHcCCCChHH-----HHHHHHHHHHHhcccccCCcCCCChhhhHHHHHHHHHHHHHHHHHHHHHhcC---------CCcc
Confidence            9999754211     1112222222211110     00 1134556678888888888888765421         2346


Q ss_pred             hHHHHHhcCCCCCCCCCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhhcccCCCCCCCCCChh
Q 047974          260 SLLNCYLSGHEVTGPTPAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRNFSQEGFNKPPLVRLN  339 (497)
Q Consensus       260 dll~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~  339 (497)
                      |+++.++.... ++..++++++.+++..+++||+|||+++++|++++|++||++|+|+++|++++.+..  +.+..++.+
T Consensus       245 d~l~~ll~~~~-~~~~~s~~ei~~~~~~ll~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~~~~~~~--~~~~~~~~~  321 (463)
T PLN02774        245 DMLGYLMRKEG-NRYKLTDEEIIDQIITILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLAIRERK--RPEDPIDWN  321 (463)
T ss_pred             cHHHHHHhCcc-CCCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhcc--CCCCCCCHH
Confidence            89999987433 223589999999999999999999999999999999999999999999999997531  123568999


Q ss_pred             hhhcchhHHHHHHHhhcCCCCCCcccccccCCCcccCCeeeCCCcEEEEeccccccCCCCCCCCCCCCCCCCccCCCCCc
Q 047974          340 ELNKLVYLHAALCETLRLYPPVPFEIRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWGEDCREFKPERWITEDGRI  419 (497)
Q Consensus       340 ~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~  419 (497)
                      ++++||||+|||+|+||++|+++...|.+.+|.++ +||.||||+.|+++.+++|+||++| +||++|+||||++++.+ 
T Consensus       322 ~l~~lpyl~a~ikE~lRl~P~v~~~~R~~~~d~~l-~g~~IpkGt~v~~~~~~~~rdp~~~-~dP~~F~PeRfl~~~~~-  398 (463)
T PLN02774        322 DYKSMRFTRAVIFETSRLATIVNGVLRKTTQDMEL-NGYVIPKGWRIYVYTREINYDPFLY-PDPMTFNPWRWLDKSLE-  398 (463)
T ss_pred             HHhcCcHHHHHHHHHHhcCCCCCCcccccCCCeeE-CCEEECCCCEEEEehHHhcCCcccC-CChhccCchhcCCCCcC-
Confidence            99999999999999999999999888888887766 9999999999999999999999999 99999999999965321 


Q ss_pred             cCCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCccceeeeeEEEeecCceEEEEEe
Q 047974          420 RHEPPHKFFSFNAGPRICIGKDIAFTLMKATAASIIHNYDVQVVKNHPVTYNLSIGFRMKHGLLARVSK  488 (497)
Q Consensus       420 ~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  488 (497)
                         ....|+|||+|+|.|+|++||++|++++++.|+++|++++.++.+...  ..+..|+++++|+++|
T Consensus       399 ---~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~Ll~~f~~~~~~~~~~~~--~~~~~p~~g~~~~~~~  462 (463)
T PLN02774        399 ---SHNYFFLFGGGTRLCPGKELGIVEISTFLHYFVTRYRWEEVGGDKLMK--FPRVEAPNGLHIRVSP  462 (463)
T ss_pred             ---CCccccCcCCCCCcCCcHHHHHHHHHHHHHHHHHhceEEECCCCcccc--CCCCCCCCCceEEeee
Confidence               123699999999999999999999999999999999999987654322  2244578899999875


No 18 
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=4.7e-71  Score=543.44  Aligned_cols=446  Identities=17%  Similarity=0.256  Sum_probs=329.3

Q ss_pred             ccCCCCCcccchhhHHHHhhccchHHHHHHHHHHHhCCeeEEeeecccCcceEEEcChhhHHHhhhcCCccccCCccccc
Q 047974           26 KINPTPWNLPLLGMLASVILNINQLHDKVAQILEKTKGSFMIKGSWVAQYDMFLTSDPANVQHIMSTNFSKYHKGSEGRK  105 (497)
Q Consensus        26 ~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~k~g~v~~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~~~~~~~~~  105 (497)
                      +.||||+++|++|++.++..+  ..+..+.+++++||++|++   ++|+.++|+++||+.+++++.++...|.+++....
T Consensus        30 ~~pPgp~~~p~~g~l~~~~~~--~~~~~~~~~~~~yG~v~~i---~~g~~~~v~v~dpe~i~~il~~~~~~~~~r~~~~~  104 (503)
T PLN02394         30 KLPPGPAAVPIFGNWLQVGDD--LNHRNLAEMAKKYGDVFLL---RMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVV  104 (503)
T ss_pred             CCCcCCCCCCeeeeHHhcCCC--chhHHHHHHHHHhCCeEEE---EcCCeeEEEeCCHHHHHHHHHhCCccccCCCCcch
Confidence            389999999999999887433  2577899999999999999   99999999999999999999876566665542211


Q ss_pred             cccccCC--cCeeecCCchHHHHHHhhh-cccCHHHHHHHHHHHhHHHHHhhHHHHhhhhc-CCCceeeHHHHHHHHHHH
Q 047974          106 RFDIFGE--TGLFNSDFDEWKHQRKLAR-AFINHQKFQQLMAKIVPEMIERGLIPVLDHVS-EEKMLVDFQDLLKRTTFD  181 (497)
Q Consensus       106 ~~~~~g~--~~l~~~~~~~w~~~R~~~~-~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~vdl~~~~~~~~~~  181 (497)
                      ...+.|.  .+++..+|+.|+++||.+. +.|+.+.+..+.+ .+++. .+.+.+.+.+.. ..++.+++.+.+..++++
T Consensus       105 ~~~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~-~i~~~-v~~lv~~l~~~~~~~~~~v~~~~~~~~~~~d  182 (503)
T PLN02394        105 FDIFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRY-GWEEE-ADLVVEDVRANPEAATEGVVIRRRLQLMMYN  182 (503)
T ss_pred             HhHhccCCCceeecCCCHHHHHHHHHHHHHhcChHHHHHhhH-HHHHH-HHHHHHHHHHhhhccCCcEecHHHHHHHHHH
Confidence            1122232  2577788999999999996 8899888887654 45555 344455554322 224568999999999999


Q ss_pred             HHHHhhcCCCCCCCCCCCCCCChHHHHHHHHHH------------HHHHHHHHH----HHhHHHHHHH-HHHHHHHHHHH
Q 047974          182 FACLIATGHNPNSLSVGFPEMGFPDAVDDACEA------------ILIRHLEKK----LANGWRTIDQ-FWEKQKSMKQE  244 (497)
Q Consensus       182 v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~----~~~~~~~~~~-~~~~~i~~~~~  244 (497)
                      +++.++||.+++..+.. ....+..........            +........    .......... +.+..++++++
T Consensus       183 vi~~~~fG~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  261 (503)
T PLN02394        183 IMYRMMFDRRFESEDDP-LFLKLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKICQDVKERRLALFKDYFVDERKK  261 (503)
T ss_pred             HHHHHHhCCCcccccch-hHHHHHHHHHHHHHHhcccccchhhhchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999988643221 111111111111100            000000011    1111111122 23334555544


Q ss_pred             HHHhccccccccchhhHHHHHhcCCCCCCCCCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhh
Q 047974          245 EIEKGMEAKEDEGIYSLLNCYLSGHEVTGPTPAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRN  324 (497)
Q Consensus       245 ~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~  324 (497)
                      ..+....  ......|+++.+++..++  ..++++++..++..+++||+|||+.+++|++++|++||++|+||++||+++
T Consensus       262 ~~~~~~~--~~~~~~d~l~~ll~~~~~--~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~v  337 (503)
T PLN02394        262 LMSAKGM--DKEGLKCAIDHILEAQKK--GEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRDELDTV  337 (503)
T ss_pred             HhhhccC--CcchhhhHHHHHHhcccc--CCCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence            3221100  012347899999987543  348999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCCCCCCCChhhhhcchhHHHHHHHhhcCCCCCCccc-ccccCCCcccCCeeeCCCcEEEEeccccccCCCCCCCC
Q 047974          325 FSQEGFNKPPLVRLNELNKLVYLHAALCETLRLYPPVPFEI-RIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWGED  403 (497)
Q Consensus       325 ~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~-r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~  403 (497)
                      .+     .+..++.+++++||||+|||+|+||++|++|... |.+.+|.+ ++||.|||||.|.++++++||||++| +|
T Consensus       338 ~~-----~~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~-i~g~~IP~Gt~V~~~~~~~~rd~~~~-~~  410 (503)
T PLN02394        338 LG-----PGNQVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLEDAK-LGGYDIPAESKILVNAWWLANNPELW-KN  410 (503)
T ss_pred             hC-----CCCCCCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCCcc-cCCEEeCCCCEEEEchHHHhCCcccC-CC
Confidence            84     2345789999999999999999999999999875 55565655 49999999999999999999999999 99


Q ss_pred             CCCCCCCCccCCCCCc-cCCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCcc-cee--ee-eEEEee
Q 047974          404 CREFKPERWITEDGRI-RHEPPHKFFSFNAGPRICIGKDIAFTLMKATAASIIHNYDVQVVKNHP-VTY--NL-SIGFRM  478 (497)
Q Consensus       404 p~~F~P~Rfl~~~~~~-~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~-~~~--~~-~~~~~~  478 (497)
                      |++|+||||++++++. ......+|+|||+|+|+|+|++||++|+++++|.|+++|++++.++.+ ...  .. ++++..
T Consensus       411 P~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~  490 (503)
T PLN02394        411 PEEFRPERFLEEEAKVEANGNDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNFELLPPPGQSKIDVSEKGGQFSLHI  490 (503)
T ss_pred             ccccCccccCCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceeEeCCCCCcCccccccCceeecc
Confidence            9999999999754321 122456899999999999999999999999999999999999877652 322  23 356656


Q ss_pred             cCceEEEEEecC
Q 047974          479 KHGLLARVSKRS  490 (497)
Q Consensus       479 ~~~~~~~~~~r~  490 (497)
                      +.++.+++.||+
T Consensus       491 ~~~~~~~~~~r~  502 (503)
T PLN02394        491 AKHSTVVFKPRS  502 (503)
T ss_pred             CCCceEEeecCC
Confidence            779999999996


No 19 
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=7.7e-71  Score=540.23  Aligned_cols=444  Identities=16%  Similarity=0.270  Sum_probs=333.3

Q ss_pred             hccCCCCCcccchhhHHHHhhccchHHHHHHHHHHHhCCeeEEeeecccCcceEEEcChhhHHHhhhcCCccccCCcccc
Q 047974           25 RKINPTPWNLPLLGMLASVILNINQLHDKVAQILEKTKGSFMIKGSWVAQYDMFLTSDPANVQHIMSTNFSKYHKGSEGR  104 (497)
Q Consensus        25 ~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~k~g~v~~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~~~~~~~~  104 (497)
                      .++||||+++|++||++++..  .+++.++.+++++||++|.+   ++++.++|+++||+.+++++.++...|.+++.+.
T Consensus        28 ~~~ppgp~~~p~~G~l~~l~~--~~~~~~~~~~~~~yG~v~~~---~~g~~~~vvi~~p~~i~~vl~~~~~~~~~~~~~~  102 (502)
T PLN02966         28 YKLPPGPSPLPVIGNLLQLQK--LNPQRFFAGWAKKYGPILSY---RIGSRTMVVISSAELAKELLKTQDVNFADRPPHR  102 (502)
T ss_pred             CCCCcCCCCCCeeccHHhcCC--CChhHHHHHHHHHhCCeEEE---ecCCCcEEEECCHHHHHHHHHhCcccccCCCCCc
Confidence            347999999999999988743  24788999999999999998   9999999999999999999988766777665433


Q ss_pred             ccc-cccCCcCe-eecCCchHHHHHHh-hhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHHHHHHHH
Q 047974          105 KRF-DIFGETGL-FNSDFDEWKHQRKL-ARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLLKRTTFD  181 (497)
Q Consensus       105 ~~~-~~~g~~~l-~~~~~~~w~~~R~~-~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~  181 (497)
                      ... ...|..++ +..+|+.|+.+|+. +++.|+.+++..+. +.+.+. .+.+.+.+.+....++.+|+.+.+..++++
T Consensus       103 ~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~-~~i~~~-~~~l~~~l~~~~~~~~~vdl~~~~~~~t~d  180 (502)
T PLN02966        103 GHEFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFK-HVREEE-ARRMMDKINKAADKSEVVDISELMLTFTNS  180 (502)
T ss_pred             cceeeccCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHHHHH-HHHHHH-HHHHHHHHHHhccCCCceeHHHHHHHHHHH
Confidence            221 11233223 45678999999999 78899999998765 455555 455666666544556689999999999999


Q ss_pred             HHHHhhcCCCCCCCCCCCCCCChHHHHHHHHHH-------HHHHH---H------HHHHHhHHHHHHHHHHHHHHHHHHH
Q 047974          182 FACLIATGHNPNSLSVGFPEMGFPDAVDDACEA-------ILIRH---L------EKKLANGWRTIDQFWEKQKSMKQEE  245 (497)
Q Consensus       182 v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~---~------~~~~~~~~~~~~~~~~~~i~~~~~~  245 (497)
                      +++.++||.+++..+.  ....+.+.+......       .+.++   +      ......+.+...+++.+.+++..+.
T Consensus       181 vi~~~~fG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  258 (502)
T PLN02966        181 VVCRQAFGKKYNEDGE--EMKRFIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYIQEVVNETLDP  258 (502)
T ss_pred             HHHHHHhCCccCccch--HHHHHHHHHHHHHHHhCcccHHHhhchhhhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            9999999998764321  112233333221111       00110   1      1122334555666666666655432


Q ss_pred             HHhccccccccchhhHHHHHhcCCCCC--CCCCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHh
Q 047974          246 IEKGMEAKEDEGIYSLLNCYLSGHEVT--GPTPAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKR  323 (497)
Q Consensus       246 ~~~~~~~~~~~~~~dll~~ll~~~~~~--~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~  323 (497)
                      ....      ....++++.+++..+++  +..++++++.++++.+++||+|||+.+++|++++|++||++|+|+++|+++
T Consensus       259 ~~~~------~~~~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~~Ei~~  332 (502)
T PLN02966        259 KRVK------PETESMIDLLMEIYKEQPFASEFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQAEVRE  332 (502)
T ss_pred             cccc------cccccHHHHHHHHHhccCcCCCCCHHHHHHHHHHHHhccccchHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence            1111      23467888888654322  345899999999999999999999999999999999999999999999999


Q ss_pred             hcccCCCCCCCCCChhhhhcchhHHHHHHHhhcCCCCCCcc-cccccCCCcccCCeeeCCCcEEEEeccccccCCCCCCC
Q 047974          324 NFSQEGFNKPPLVRLNELNKLVYLHAALCETLRLYPPVPFE-IRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWGE  402 (497)
Q Consensus       324 ~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~-~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~  402 (497)
                      +.+.+   ++..++.+++++||||+|||+|+||++|++++. .|.+.+|.++ +||.|||||.|+++++++||||++||+
T Consensus       333 v~~~~---~~~~~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~l-~g~~IP~Gt~V~~~~~~~~rdp~~~g~  408 (502)
T PLN02966        333 YMKEK---GSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKI-AGYDIPAGTTVNVNAWAVSRDEKEWGP  408 (502)
T ss_pred             Hhccc---CCCcCCHhhccCCcHHHHHHHHHhccCCCcccccCcccCCCeeE-ccEEECCCCEEEEecccccCCcccccC
Confidence            98531   234579999999999999999999999999985 5776666555 999999999999999999999999999


Q ss_pred             CCCCCCCCCccCCCCCccCCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCccc-----eeeeeEEEe
Q 047974          403 DCREFKPERWITEDGRIRHEPPHKFFSFNAGPRICIGKDIAFTLMKATAASIIHNYDVQVVKNHPV-----TYNLSIGFR  477 (497)
Q Consensus       403 ~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~-----~~~~~~~~~  477 (497)
                      ||++|+||||++++.+. ...+..|+|||+|+|+|+|++||++|++++++.|+++|+|++.++...     ++..+.+..
T Consensus       409 dP~~F~PeRwl~~~~~~-~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ll~~f~i~~~~~~~~~~~~~~~~~~~~~~  487 (502)
T PLN02966        409 NPDEFRPERFLEKEVDF-KGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLNFNFKLPNGMKPDDINMDVMTGLAMH  487 (502)
T ss_pred             ChhhCChhhhcCCCCCc-CCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHhceeeCCCCCCcccCCcccccCeeec
Confidence            99999999999754321 124578999999999999999999999999999999999999875422     123344443


Q ss_pred             ecCceEEEEEecC
Q 047974          478 MKHGLLARVSKRS  490 (497)
Q Consensus       478 ~~~~~~~~~~~r~  490 (497)
                      +++  .+++++|.
T Consensus       488 ~~~--~~~~~~~~  498 (502)
T PLN02966        488 KSQ--HLKLVPEK  498 (502)
T ss_pred             cCC--CeEEEEEe
Confidence            443  45566554


No 20 
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=1.1e-69  Score=529.36  Aligned_cols=448  Identities=23%  Similarity=0.360  Sum_probs=359.4

Q ss_pred             ccCCCCCcccchhhHHHHhhcc--chHHHHHHHHHHHhCCeeEEeeecccCcceEEEcChhhHHHhhhcCCccccCCccc
Q 047974           26 KINPTPWNLPLLGMLASVILNI--NQLHDKVAQILEKTKGSFMIKGSWVAQYDMFLTSDPANVQHIMSTNFSKYHKGSEG  103 (497)
Q Consensus        26 ~~ppgp~~~P~~G~~~~~~~~~--~~~~~~~~~~~~k~g~v~~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~~~~~~~  103 (497)
                      ++=.|..|||++|+.++++.+.  +.++..+.+++++||++|++   ++|+.++++++||+++++|+.+....|.+++.+
T Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~---~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~   88 (489)
T PLN02936         12 RLWGDDSGIPVADAKLEDVTDLLGGALFLPLFKWMNEYGPVYRL---AAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVA   88 (489)
T ss_pred             ccCCCCCCCccHHhHHhhHHHHhccHHHHHHHHHHHHcCCEEEE---ccCCccEEEEcCHHHHHHHHHhccccccCcchh
Confidence            3556889999999999997765  67889999999999999999   999999999999999999998765778776543


Q ss_pred             cccccccCCcCeeecCCchHHHHHHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHHHHHHHHHH
Q 047974          104 RKRFDIFGETGLFNSDFDEWKHQRKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLLKRTTFDFA  183 (497)
Q Consensus       104 ~~~~~~~g~~~l~~~~~~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~v~  183 (497)
                      .....++|. +++.++|+.|+++||++++.|+..++..+.+.++.+. .+.+.+.+.+....++++|+.+.++.++++++
T Consensus        89 ~~~~~~~~~-~i~~~~g~~wk~~Rk~l~~~f~~~~l~~~~~~~~~~~-~~~l~~~l~~~~~~g~~vd~~~~~~~~~~dvi  166 (489)
T PLN02936         89 EVSEFLFGS-GFAIAEGELWTARRRAVVPSLHRRYLSVMVDRVFCKC-AERLVEKLEPVALSGEAVNMEAKFSQLTLDVI  166 (489)
T ss_pred             hhhHHHhcC-ccccCCchHHHHHHHhhcCccCHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCCCceeHHHHHHHHHHHHH
Confidence            322234566 8888999999999999999999888887665555554 56677777665455678999999999999999


Q ss_pred             HHhhcCCCCCCCCCCCCCCChHHHHHHHHHH---------HHH-----HHH---HHHHHhHHHHHHHHHHHHHHHHHHHH
Q 047974          184 CLIATGHNPNSLSVGFPEMGFPDAVDDACEA---------ILI-----RHL---EKKLANGWRTIDQFWEKQKSMKQEEI  246 (497)
Q Consensus       184 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~-----~~~---~~~~~~~~~~~~~~~~~~i~~~~~~~  246 (497)
                      +.++||.+++..+.+   ..+.+.+......         +.+     ..+   .+...++.+.+.+++.+.++++++..
T Consensus       167 ~~~~fG~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~p~~~~~~~~~~~i~~~~~~~i~~~~~~~  243 (489)
T PLN02936        167 GLSVFNYNFDSLTTD---SPVIQAVYTALKEAETRSTDLLPYWKVDFLCKISPRQIKAEKAVTVIRETVEDLVDKCKEIV  243 (489)
T ss_pred             HHHHcCCCccccccC---cHHHHHHHHHHHHHHHhhhccchHHhhHHHhccChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999998754321   2233333221111         000     000   23455677788888888888877654


Q ss_pred             Hhccccc-----cccchhhHHHHHhcCCCCCCCCCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHH
Q 047974          247 EKGMEAK-----EDEGIYSLLNCYLSGHEVTGPTPAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREEL  321 (497)
Q Consensus       247 ~~~~~~~-----~~~~~~dll~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei  321 (497)
                      +......     ......++++.++...+    .++++++.++++.+++||+|||+.+++|++++|++||++|+++++|+
T Consensus       244 ~~~~~~~~~~~~~~~~~~d~l~~ll~~~~----~~~~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~p~~~~kl~~Ei  319 (489)
T PLN02936        244 EAEGEVIEGEEYVNDSDPSVLRFLLASRE----EVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKNPEALRKAQEEL  319 (489)
T ss_pred             hhcccccccccccccCchHHHHHHHhccc----cCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence            3221110     01234689999987643    37899999999999999999999999999999999999999999999


Q ss_pred             HhhcccCCCCCCCCCChhhhhcchhHHHHHHHhhcCCCCCCcccccccCCCcccCCeeeCCCcEEEEeccccccCCCCCC
Q 047974          322 KRNFSQEGFNKPPLVRLNELNKLVYLHAALCETLRLYPPVPFEIRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWG  401 (497)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g  401 (497)
                      +++++     . ..++.+++++||||+|||+||||++|+++...|++..++++++||.|||||.|+++.+++||||++| 
T Consensus       320 ~~~~~-----~-~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~-  392 (489)
T PLN02936        320 DRVLQ-----G-RPPTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKVNAGQDIMISVYNIHRSPEVW-  392 (489)
T ss_pred             HHHhc-----C-CCCCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccCccccCCeEECCCCEEEecHHhccCChhhC-
Confidence            99984     2 3478999999999999999999999999988888877777779999999999999999999999999 


Q ss_pred             CCCCCCCCCCccCCCCCcc-CCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCccceeeeeEEEeecC
Q 047974          402 EDCREFKPERWITEDGRIR-HEPPHKFFSFNAGPRICIGKDIAFTLMKATAASIIHNYDVQVVKNHPVTYNLSIGFRMKH  480 (497)
Q Consensus       402 ~~p~~F~P~Rfl~~~~~~~-~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~  480 (497)
                      +||++|+||||+.++.... ...+..|+|||.|+|.|+|++||++|++++++.|+++|+++++++.+.....+++..|++
T Consensus       393 ~dP~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~  472 (489)
T PLN02936        393 ERAEEFVPERFDLDGPVPNETNTDFRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDLELVPDQDIVMTTGATIHTTN  472 (489)
T ss_pred             CCccccCccccCCCCCCccccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCeEEecCCCccceecceEEeeCC
Confidence            9999999999996532111 113468999999999999999999999999999999999999876554444557778889


Q ss_pred             ceEEEEEecCCC
Q 047974          481 GLLARVSKRSAQ  492 (497)
Q Consensus       481 ~~~~~~~~r~~~  492 (497)
                      +++|++++|...
T Consensus       473 ~~~v~~~~R~~~  484 (489)
T PLN02936        473 GLYMTVSRRRVP  484 (489)
T ss_pred             CeEEEEEeeeCC
Confidence            999999999764


No 21 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00  E-value=9.4e-70  Score=528.47  Aligned_cols=431  Identities=32%  Similarity=0.576  Sum_probs=342.9

Q ss_pred             cccchhhHHHHhhccchHHHHHHHHHHHhCC-eeEEeeecccCcceEEEcChhhHHHhhhcCCccccCCccccccc-ccc
Q 047974           33 NLPLLGMLASVILNINQLHDKVAQILEKTKG-SFMIKGSWVAQYDMFLTSDPANVQHIMSTNFSKYHKGSEGRKRF-DIF  110 (497)
Q Consensus        33 ~~P~~G~~~~~~~~~~~~~~~~~~~~~k~g~-v~~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~~~~~~~~~~~-~~~  110 (497)
                      ..++.|+......+   +++++..+.+++++ ++.+   +..+.  ++++||+.+++|+.++...|.++..+.... .++
T Consensus        48 ~~~~~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~---~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~~~~  119 (502)
T PLN02426         48 RAYLTASWAKDFDN---LCDWYAHLLRRSPTGTIHV---HVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAILGDLL  119 (502)
T ss_pred             CCCccHHHHHhccc---HHHHHHHHHHhCCCcEEEE---ecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHHHHhc
Confidence            45688888664333   56777778888873 6666   44443  899999999999988767888876654433 567


Q ss_pred             CCcCeeecCCchHHHHHHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcC--CCceeeHHHHHHHHHHHHHHHhhc
Q 047974          111 GETGLFNSDFDEWKHQRKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSE--EKMLVDFQDLLKRTTFDFACLIAT  188 (497)
Q Consensus       111 g~~~l~~~~~~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~vdl~~~~~~~~~~v~~~~~f  188 (497)
                      |. |+++++|+.|+++||.+++.|+.++++.+....+.+++.+.+.+.+.+.++  .+.++|+.++++.+++|+++.++|
T Consensus       120 g~-gi~~~~g~~wk~~Rk~l~~~fs~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~f  198 (502)
T PLN02426        120 GR-GIFNVDGDSWRFQRKMASLELGSVSIRSYAFEIVASEIESRLLPLLSSAADDGEGAVLDLQDVFRRFSFDNICKFSF  198 (502)
T ss_pred             CC-ceeecCcHHHHHHHHHhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEcHHHHHHHHHHHHHHHHHh
Confidence            88 999999999999999999999999988765333334445667777765432  246799999999999999999999


Q ss_pred             CCCCCCCCCCCCCCChHHHHHHHHHHHH---------HH----HH----HHHHHhHHHHHHHHHHHHHHHHHHHHHhccc
Q 047974          189 GHNPNSLSVGFPEMGFPDAVDDACEAIL---------IR----HL----EKKLANGWRTIDQFWEKQKSMKQEEIEKGME  251 (497)
Q Consensus       189 G~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~----~~----~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  251 (497)
                      |.+++..+.+.....+.+.+........         ..    ++    .++..++.+.+.+++.+.|+++++...    
T Consensus       199 G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~~----  274 (502)
T PLN02426        199 GLDPGCLELSLPISEFADAFDTASKLSAERAMAASPLLWKIKRLLNIGSERKLKEAIKLVDELAAEVIRQRRKLGF----  274 (502)
T ss_pred             CCCCcccCCCCCccHHHHHHHHHHHHHHHHHhcchhHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHhccc----
Confidence            9998766543333445555544322110         00    10    234566778888888888888765321    


Q ss_pred             cccccchhhHHHHHhcCCCCCCCCCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhhcccCCCC
Q 047974          252 AKEDEGIYSLLNCYLSGHEVTGPTPAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRNFSQEGFN  331 (497)
Q Consensus       252 ~~~~~~~~dll~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~  331 (497)
                          ....|+++.+++...      +++++.++++.+++||+|||+.+++|++++|++||++|+|+++|++++.+.    
T Consensus       275 ----~~~~dll~~ll~~~~------~~~~l~~~~~~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~----  340 (502)
T PLN02426        275 ----SASKDLLSRFMASIN------DDKYLRDIVVSFLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMGP----  340 (502)
T ss_pred             ----CCcchHHHHHHhcCC------CHHHHHHHHHHHHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCC----
Confidence                234689999997643      678899999999999999999999999999999999999999999998852    


Q ss_pred             CCCCCChhhhhcchhHHHHHHHhhcCCCCCCcccccccCCCcccCCeeeCCCcEEEEeccccccCCCCCCCCCCCCCCCC
Q 047974          332 KPPLVRLNELNKLVYLHAALCETLRLYPPVPFEIRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWGEDCREFKPER  411 (497)
Q Consensus       332 ~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~R  411 (497)
                      ....++.+++++||||+|||+|+||++||+|...|++.+|+++++||.|||||.|.++.+++||||++||+||++|+|||
T Consensus       341 ~~~~~t~~~l~~LpYl~avi~EtLRl~p~v~~~~r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp~~F~PeR  420 (502)
T PLN02426        341 NQEAASFEEMKEMHYLHAALYESMRLFPPVQFDSKFAAEDDVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFKPER  420 (502)
T ss_pred             CCCCCCHHHHhcChHHHHHHHHHHhCCCCCCCcceeeccCCCcCCCcEECCCCEEEEchHHhcCCccccCcChhhcCccc
Confidence            23468999999999999999999999999999889998888888999999999999999999999999999999999999


Q ss_pred             ccCCCCCccCCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCcc--ceeeeeEEEeecCceEEEEEec
Q 047974          412 WITEDGRIRHEPPHKFFSFNAGPRICIGKDIAFTLMKATAASIIHNYDVQVVKNHP--VTYNLSIGFRMKHGLLARVSKR  489 (497)
Q Consensus       412 fl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~r  489 (497)
                      |++++ +.....+..|+|||+|+|.|+|++||++|++++++.|+++|++++.++..  .....+.+..|+++++|++++|
T Consensus       421 wl~~~-~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~gl~v~~~~r  499 (502)
T PLN02426        421 WLKNG-VFVPENPFKYPVFQAGLRVCLGKEMALMEMKSVAVAVVRRFDIEVVGRSNRAPRFAPGLTATVRGGLPVRVRER  499 (502)
T ss_pred             cCCCC-CcCCCCCcccCCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEEecCCCCCCcccceeEEecCCCEEEEEEEc
Confidence            99742 22222456899999999999999999999999999999999999975322  2344567889999999999998


Q ss_pred             CC
Q 047974          490 SA  491 (497)
Q Consensus       490 ~~  491 (497)
                      ..
T Consensus       500 ~~  501 (502)
T PLN02426        500 VR  501 (502)
T ss_pred             cC
Confidence            53


No 22 
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=1.5e-70  Score=531.58  Aligned_cols=439  Identities=14%  Similarity=0.162  Sum_probs=342.5

Q ss_pred             hhccCCCCCcccchhhHHHHhhc--cchHHHHHHHHHHHhCCeeEEeeecccCcceEEEcChhhHHHhhhcCCccccCCc
Q 047974           24 FRKINPTPWNLPLLGMLASVILN--INQLHDKVAQILEKTKGSFMIKGSWVAQYDMFLTSDPANVQHIMSTNFSKYHKGS  101 (497)
Q Consensus        24 ~~~~ppgp~~~P~~G~~~~~~~~--~~~~~~~~~~~~~k~g~v~~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~~~~~  101 (497)
                      .+++||||.++|++||++++..+  ...++.++..++++||++|++   ++|+++.|+++||+++++++.++...|..+.
T Consensus         5 ~~~~Ppg~~~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~i~~~---~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~   81 (452)
T PLN03141          5 KSRLPKGSLGWPVIGETLDFISCAYSSRPESFMDKRRSLYGKVFKS---HIFGTPTIVSTDAEVNKVVLQSDGNAFVPAY   81 (452)
T ss_pred             CCCCCCCCCCCCchhhHHHHHhhcccCChHHHHHHHHHHhhheeee---ccCCCCEEEEeCHHHhhHHHhCCCCeeeccC
Confidence            34589999999999999988542  234788999999999999999   9999999999999999999988755554331


Q ss_pred             cccccccccCCcCeeecCCchHHHHHHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHHHHHHHH
Q 047974          102 EGRKRFDIFGETGLFNSDFDEWKHQRKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLLKRTTFD  181 (497)
Q Consensus       102 ~~~~~~~~~g~~~l~~~~~~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~  181 (497)
                       ......++|..+++..+|+.|+++|+++++.|+..++...+...+.+.+    .+.+++. ..+..+++.+.+..++++
T Consensus        82 -~~~~~~l~g~~~~~~~~g~~wr~~r~~~~~~~~~~~l~~~~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~~  155 (452)
T PLN03141         82 -PKSLTELMGKSSILLINGSLQRRVHGLIGAFLKSPHLKAQITRDMERYV----SESLDSW-RDDPPVLVQDETKKIAFE  155 (452)
T ss_pred             -chhHHHHhCcccccccCcHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHH----HHHHHhc-cCCCCEEhHHHHHHHHHH
Confidence             1112245665468889999999999999999988877664333333332    2223322 234678999999999999


Q ss_pred             HHHHhhcCCCCCCCCCCCCCCChHHHHHHHHHHHHH------HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccccccc
Q 047974          182 FACLIATGHNPNSLSVGFPEMGFPDAVDDACEAILI------RHLEKKLANGWRTIDQFWEKQKSMKQEEIEKGMEAKED  255 (497)
Q Consensus       182 v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  255 (497)
                      +++.++||.+.+..     ...+.+.+..+......      .....+..++.+.+.+++.+.|+++++....+... ..
T Consensus       156 vi~~~~~G~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~-~~  229 (452)
T PLN03141        156 VLVKALISLEPGEE-----MEFLKKEFQEFIKGLMSLPIKLPGTRLYRSLQAKKRMVKLVKKIIEEKRRAMKNKEED-ET  229 (452)
T ss_pred             HHHHHHcCCCchHH-----HHHHHHHHHHHhhhHHhCccCCCchHhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcc-cc
Confidence            99999999765311     11222222222221110      00123445678899999999999887654322100 00


Q ss_pred             cchhhHHHHHhcCCCCCCCCCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhhcccCCCCCCCC
Q 047974          256 EGIYSLLNCYLSGHEVTGPTPAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRNFSQEGFNKPPL  335 (497)
Q Consensus       256 ~~~~dll~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~  335 (497)
                      ....|+++.+++..+   ..+++++++.+++.+++||+|||+.+++|++++|+.||++|+++++|++++.+... ..+..
T Consensus       230 ~~~~d~l~~ll~~~~---~~l~~~~i~~~~~~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl~~Ei~~~~~~~~-~~~~~  305 (452)
T PLN03141        230 GIPKDVVDVLLRDGS---DELTDDLISDNMIDMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTEENMKLKRLKA-DTGEP  305 (452)
T ss_pred             CChhhHHHHHHhcCC---CCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHHhccC-CCCCC
Confidence            124689999987653   45899999999999999999999999999999999999999999999998864211 22346


Q ss_pred             CChhhhhcchhHHHHHHHhhcCCCCCCcccccccCCCcccCCeeeCCCcEEEEeccccccCCCCCCCCCCCCCCCCccCC
Q 047974          336 VRLNELNKLVYLHAALCETLRLYPPVPFEIRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWGEDCREFKPERWITE  415 (497)
Q Consensus       336 ~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~  415 (497)
                      ++.+++.+||||+|||+|++|++|+++...|.+.+|.++ +||.||||+.|+++.+++|+||++| +||++|+||||+++
T Consensus       306 ~~~~~~~~lpyl~avi~E~lRl~p~~~~~~R~~~~d~~l-~g~~IPkG~~V~~~~~~~~~d~~~~-~dP~~F~PeRfl~~  383 (452)
T PLN03141        306 LYWTDYMSLPFTQNVITETLRMGNIINGVMRKAMKDVEI-KGYLIPKGWCVLAYFRSVHLDEENY-DNPYQFNPWRWQEK  383 (452)
T ss_pred             CCHHHHhccHHHHHHHHHHHhccCCcCCcceeecCCeeE-CCEEECCCCEEEEehHhccCCchhc-CCccccCcccccCC
Confidence            799999999999999999999999998888888877666 9999999999999999999999999 99999999999975


Q ss_pred             CCCccCCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCccceeeeeEEEeecCceEEEEEecCC
Q 047974          416 DGRIRHEPPHKFFSFNAGPRICIGKDIAFTLMKATAASIIHNYDVQVVKNHPVTYNLSIGFRMKHGLLARVSKRSA  491 (497)
Q Consensus       416 ~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  491 (497)
                      +.     .+..|+|||+|+|.|+|++||++|++++++.|+++|++++.++...   ...++.|..++.|++++|+.
T Consensus       384 ~~-----~~~~~~pFG~G~R~C~G~~lA~~el~~~la~ll~~f~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~  451 (452)
T PLN03141        384 DM-----NNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTRFRWVAEEDTIV---NFPTVRMKRKLPIWVTRIDD  451 (452)
T ss_pred             CC-----CCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcCeeecCCCCee---ecccccCCCCceEEEEeCCC
Confidence            32     3568999999999999999999999999999999999998765422   23578888999999999964


No 23 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=1.5e-69  Score=526.15  Aligned_cols=437  Identities=19%  Similarity=0.271  Sum_probs=334.1

Q ss_pred             CCCCCcccchhhHHHHhhccchHHHHHHHHHHHhCCeeEEeeecccCcceEEEcChhhHHHhhhcCCccccCCccccccc
Q 047974           28 NPTPWNLPLLGMLASVILNINQLHDKVAQILEKTKGSFMIKGSWVAQYDMFLTSDPANVQHIMSTNFSKYHKGSEGRKRF  107 (497)
Q Consensus        28 ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~k~g~v~~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~~~~~~~~~~~  107 (497)
                      ||||+++|++||++++..+  +++.++.+++++||++|++   ++|++++++|+||+.+++++.++...|.+++......
T Consensus         1 ppgp~~lP~iG~l~~~~~~--~~~~~~~~~~~~yG~i~~~---~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~~   75 (466)
T PLN02655          1 VPAVPGLPVIGNLLQLKEK--KPHRTFTKWSEIYGPIYTI---RTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKALT   75 (466)
T ss_pred             CcCCCCCCccccHHHcCCC--chhHHHHHHHHHhCCeEEE---EECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHHH
Confidence            7899999999999998543  4788999999999999999   9999999999999999999998777887766443332


Q ss_pred             cccCCc-CeeecC-CchHHHHHHhhhc-ccCHHHHHHHHHHHhHHHHHhhHHHHhhhhc--CCCceeeHHHHHHHHHHHH
Q 047974          108 DIFGET-GLFNSD-FDEWKHQRKLARA-FINHQKFQQLMAKIVPEMIERGLIPVLDHVS--EEKMLVDFQDLLKRTTFDF  182 (497)
Q Consensus       108 ~~~g~~-~l~~~~-~~~w~~~R~~~~~-~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~--~~~~~vdl~~~~~~~~~~v  182 (497)
                      .+.|.. ++++.+ |+.|+++||.+.+ .|+...++.+. ..+++. .+.+.+.+.+..  ..++.+|+.+.+..+++++
T Consensus        76 ~~~~~~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~-~~~~~~-~~~~~~~l~~~~~~~~~~~vd~~~~~~~~t~dv  153 (466)
T PLN02655         76 VLTRDKSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFR-DTRDML-IENMLSGLHALVKDDPHSPVNFRDVFENELFGL  153 (466)
T ss_pred             HHhcCCCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhH-HHHHHH-HHHHHHHHHhhccccCCCceeHHHHHHHHHHHH
Confidence            334431 355554 8999999987765 46655555443 334433 344444443321  2356799999999999999


Q ss_pred             HHHhhcCCCCCCCCCCCCCCC------hHHHHHHHHHHH----------HHHHH-----HHHHHhHHHHHHHHHHHHHHH
Q 047974          183 ACLIATGHNPNSLSVGFPEMG------FPDAVDDACEAI----------LIRHL-----EKKLANGWRTIDQFWEKQKSM  241 (497)
Q Consensus       183 ~~~~~fG~~~~~~~~~~~~~~------~~~~~~~~~~~~----------~~~~~-----~~~~~~~~~~~~~~~~~~i~~  241 (497)
                      ++.++||.+++..........      +...+.......          .++++     .+...+....+.++++.++++
T Consensus       154 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  233 (466)
T PLN02655        154 SLIQALGEDVESVYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLSWIPNKSFETRVQTTEFRRTAVMKALIKQ  233 (466)
T ss_pred             HHHHHhccccccccccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999998765432211111      122222221110          01111     111222233445677777777


Q ss_pred             HHHHHHhccccccccchhhHHHHHhcCCCCCCCCCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHH
Q 047974          242 KQEEIEKGMEAKEDEGIYSLLNCYLSGHEVTGPTPAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREEL  321 (497)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei  321 (497)
                      +++....+      ....|+++.+++...    .++++++.++++.+++||+|||+++++|++++|++||++|+++++||
T Consensus       234 ~~~~~~~~------~~~~d~l~~ll~~~~----~ls~~~i~~~~~~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~~Ei  303 (466)
T PLN02655        234 QKKRIARG------EERDCYLDFLLSEAT----HLTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNPDKQERLYREI  303 (466)
T ss_pred             HHHhhcCC------CCcccHHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence            76543322      234589999997753    48999999999999999999999999999999999999999999999


Q ss_pred             HhhcccCCCCCCCCCChhhhhcchhHHHHHHHhhcCCCCCCccc-ccccCCCcccCCeeeCCCcEEEEeccccccCCCCC
Q 047974          322 KRNFSQEGFNKPPLVRLNELNKLVYLHAALCETLRLYPPVPFEI-RIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVW  400 (497)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~-r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~  400 (497)
                      +++.+     .+ .++.+++.++|||+|||+||||++|+++... |.+.+|.++ +||.|||||.|+++.+++||||++|
T Consensus       304 ~~~~~-----~~-~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~-~g~~ip~gt~v~~~~~~~~~d~~~~  376 (466)
T PLN02655        304 REVCG-----DE-RVTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTL-GGYDIPAGTQIAINIYGCNMDKKRW  376 (466)
T ss_pred             HHHhC-----CC-CCCHHHHhcChHHHHHHHHHhccCCCcCCCCCcccCCCccc-CCEEECCCCEEEecHHHhcCCcccC
Confidence            99984     22 3899999999999999999999999999874 777777665 9999999999999999999999999


Q ss_pred             CCCCCCCCCCCccCCCCCccCCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCcc-ceeeeeEEEeec
Q 047974          401 GEDCREFKPERWITEDGRIRHEPPHKFFSFNAGPRICIGKDIAFTLMKATAASIIHNYDVQVVKNHP-VTYNLSIGFRMK  479 (497)
Q Consensus       401 g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~-~~~~~~~~~~~~  479 (497)
                       +||++|+||||++.++..  .....++|||+|+|.|+|++||+.|++++++.|+++|++++.++.. .....+++.+++
T Consensus       377 -~~p~~F~PeR~~~~~~~~--~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~  453 (466)
T PLN02655        377 -ENPEEWDPERFLGEKYES--ADMYKTMAFGAGKRVCAGSLQAMLIACMAIARLVQEFEWRLREGDEEKEDTVQLTTQKL  453 (466)
T ss_pred             -CChhccCccccCCCCccc--CCcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHeEEEeCCCCccccchhheeEeec
Confidence             999999999999754321  1347899999999999999999999999999999999999976532 334456778888


Q ss_pred             CceEEEEEecCC
Q 047974          480 HGLLARVSKRSA  491 (497)
Q Consensus       480 ~~~~~~~~~r~~  491 (497)
                      +++.|++.+|.+
T Consensus       454 ~~~~~~~~~r~~  465 (466)
T PLN02655        454 HPLHAHLKPRGS  465 (466)
T ss_pred             CCcEEEEeecCC
Confidence            999999999864


No 24 
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=2.1e-70  Score=531.15  Aligned_cols=421  Identities=17%  Similarity=0.228  Sum_probs=334.5

Q ss_pred             cCCCCCcccchhhHHHHhhccchHHHHHHHHHHHhCCeeEEeeecccCcceEEEcChhhHHHhhhcCCccccCCcccccc
Q 047974           27 INPTPWNLPLLGMLASVILNINQLHDKVAQILEKTKGSFMIKGSWVAQYDMFLTSDPANVQHIMSTNFSKYHKGSEGRKR  106 (497)
Q Consensus        27 ~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~k~g~v~~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~~~~~~~~~~  106 (497)
                      .||||+++|++||+.++..+  +++.++.+++++||++|++   ++++.++|+++||+++++++.++...+ +.......
T Consensus        36 ~Ppgp~~~P~iG~~~~~~~~--~~~~~~~~~~~~yG~i~~~---~~~~~~~v~v~~p~~~~~vl~~~~~~~-~~~~~~~~  109 (463)
T PLN02196         36 LPPGTMGWPYVGETFQLYSQ--DPNVFFASKQKRYGSVFKT---HVLGCPCVMISSPEAAKFVLVTKSHLF-KPTFPASK  109 (463)
T ss_pred             CCCCCCCCCccchHHHHHhc--CHHHHHHHHHHHhhhhhee---eecCCceEEEcCHHHHHHHHhCCCCcc-cccCchHH
Confidence            78899999999999876433  5788999999999999999   999999999999999999998765555 22222111


Q ss_pred             ccccCCcCeeecCCchHHHHHHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHHHHHHHHHHHHh
Q 047974          107 FDIFGETGLFNSDFDEWKHQRKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLLKRTTFDFACLI  186 (497)
Q Consensus       107 ~~~~g~~~l~~~~~~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~v~~~~  186 (497)
                      ...+|..+++..+|+.|+++||++.+.|++++++.+.+. +.+. .+.+.+.+.     ++.+|+.+.++.+++++++.+
T Consensus       110 ~~~~g~~~l~~~~g~~w~~~Rk~l~~~f~~~~l~~~~~~-i~~~-~~~~~~~~~-----~~~v~~~~~~~~~~~~v~~~~  182 (463)
T PLN02196        110 ERMLGKQAIFFHQGDYHAKLRKLVLRAFMPDAIRNMVPD-IESI-AQESLNSWE-----GTQINTYQEMKTYTFNVALLS  182 (463)
T ss_pred             HHHcCcccccccCcHHHHHHHHHHHHhcChHHHHHHHHH-HHHH-HHHHHHcCC-----CCeEEeHHHHHHHHHHHHHHH
Confidence            134565478889999999999999999999999887653 4444 333433332     357899999999999999999


Q ss_pred             hcCCCCCCCCCCCCCCChHHHHHHHHHH----HH--HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccccccccchhh
Q 047974          187 ATGHNPNSLSVGFPEMGFPDAVDDACEA----IL--IRHLEKKLANGWRTIDQFWEKQKSMKQEEIEKGMEAKEDEGIYS  260 (497)
Q Consensus       187 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~----~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~d  260 (497)
                      +||.+....     ...+.+.+......    +.  .....++..++.+.+.+++.+.++++++..         ....|
T Consensus       183 ~fG~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~~~~i~~~~~~~---------~~~~d  248 (463)
T PLN02196        183 IFGKDEVLY-----REDLKRCYYILEKGYNSMPINLPGTLFHKSMKARKELAQILAKILSKRRQNG---------SSHND  248 (463)
T ss_pred             HcCCCCchH-----HHHHHHHHHHHhcchhcccccCCCccchHHHHHHHHHHHHHHHHHHHHhhcC---------CCccc
Confidence            999864211     01111111111100    00  001134566778888888888888775431         23468


Q ss_pred             HHHHHhcCCCCCCCCCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhhcccCCCCCCCCCChhh
Q 047974          261 LLNCYLSGHEVTGPTPAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRNFSQEGFNKPPLVRLNE  340 (497)
Q Consensus       261 ll~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~  340 (497)
                      +++.++++.    ..++++++.++++.+++||+|||+++++|++++|++||++|+++++|++++.+..  +.+..++.++
T Consensus       249 ~l~~ll~~~----~~l~~~ei~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~--~~~~~~~~~~  322 (463)
T PLN02196        249 LLGSFMGDK----EGLTDEQIADNIIGVIFAARDTTASVLTWILKYLAENPSVLEAVTEEQMAIRKDK--EEGESLTWED  322 (463)
T ss_pred             HHHHHHhcC----CCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhccc--ccCCCCCHHH
Confidence            999888642    3489999999999999999999999999999999999999999999999988532  2245689999


Q ss_pred             hhcchhHHHHHHHhhcCCCCCCcccccccCCCcccCCeeeCCCcEEEEeccccccCCCCCCCCCCCCCCCCccCCCCCcc
Q 047974          341 LNKLVYLHAALCETLRLYPPVPFEIRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWGEDCREFKPERWITEDGRIR  420 (497)
Q Consensus       341 l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~  420 (497)
                      ++++|||+|||+|+||++|++++..|.+.+|.++ +||.|||||.|+++.+++|+||++| +||++|+||||++..    
T Consensus       323 ~~~l~yl~avi~EtlRl~p~~~~~~R~~~~d~~i-~g~~IpkGt~v~~~~~~~~rd~~~~-~dP~~F~PeRfl~~~----  396 (463)
T PLN02196        323 TKKMPLTSRVIQETLRVASILSFTFREAVEDVEY-EGYLIPKGWKVLPLFRNIHHSADIF-SDPGKFDPSRFEVAP----  396 (463)
T ss_pred             HhcChHHHHHHHHHHhcCCCccccceeecccccc-CCEEeCCCCEEEeeHHHhcCCchhc-CCcCccChhhhcCCC----
Confidence            9999999999999999999999988988887666 9999999999999999999999999 999999999999632    


Q ss_pred             CCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCccceeeeeEEEeecCceEEEEEec
Q 047974          421 HEPPHKFFSFNAGPRICIGKDIAFTLMKATAASIIHNYDVQVVKNHPVTYNLSIGFRMKHGLLARVSKR  489 (497)
Q Consensus       421 ~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  489 (497)
                        .+..|+|||+|+|.|+|+++|++|++++++.|+++|++++.+++. ......+..|+++++|+++..
T Consensus       397 --~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~-~~~~~~~~~p~~~~~~~~~~~  462 (463)
T PLN02196        397 --KPNTFMPFGNGTHSCPGNELAKLEISVLIHHLTTKYRWSIVGTSN-GIQYGPFALPQNGLPIALSRK  462 (463)
T ss_pred             --CCCcccCcCCCCCCCchHHHHHHHHHHHHHHHHHhcEEEEcCCCC-ceEEcccccCCCCceEEEecC
Confidence              356899999999999999999999999999999999999987532 233444567889999998764


No 25 
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=3.8e-69  Score=532.15  Aligned_cols=423  Identities=23%  Similarity=0.412  Sum_probs=333.1

Q ss_pred             chHHHHHHHHHHHhCCeeEEeeecccCcceEEEcChhhHHHhhhcCCccccCCccccccccccCCcCeeecCCchHHHHH
Q 047974           48 NQLHDKVAQILEKTKGSFMIKGSWVAQYDMFLTSDPANVQHIMSTNFSKYHKGSEGRKRFDIFGETGLFNSDFDEWKHQR  127 (497)
Q Consensus        48 ~~~~~~~~~~~~k~g~v~~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~w~~~R  127 (497)
                      +.++..+.++|++|||||++   ++|+.++++|+||+.+++|+.++...|.+++.+.......|. ++++.+++.|+.+|
T Consensus       151 g~~~~~l~~lh~kYGpI~ri---~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~~~~~~~g~-~l~~~dge~wr~rR  226 (633)
T PLN02738        151 EAFFIPLYELFLTYGGIFRL---TFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEILEFVMGK-GLIPADGEIWRVRR  226 (633)
T ss_pred             chHHHHHHHHHHHhCCEEEE---EeCCCCEEEECCHHHHHHHHhhCcccCCCcchHHHHhhccCC-ceecCCcHHHHHHH
Confidence            56888999999999999999   889999999999999999998765667776543222233466 88889999999999


Q ss_pred             HhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCChHHH
Q 047974          128 KLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLLKRTTFDFACLIATGHNPNSLSVGFPEMGFPDA  207 (497)
Q Consensus       128 ~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~v~~~~~fG~~~~~~~~~~~~~~~~~~  207 (497)
                      +.+++.|+..++..+. ..+.+. .+.+.+.+++....++++|+.+.+..+++|+++.++||.+++....+   ..+.+.
T Consensus       227 r~l~p~Fs~~~v~~l~-~~i~~~-v~~L~~~L~~~~~~g~~vdl~~~~~~lt~DVI~~~~FG~~~~~~~~~---~~~~~~  301 (633)
T PLN02738        227 RAIVPALHQKYVAAMI-SLFGQA-SDRLCQKLDAAASDGEDVEMESLFSRLTLDIIGKAVFNYDFDSLSND---TGIVEA  301 (633)
T ss_pred             HhccHhhhHHHHHHHH-HHHHHH-HHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHHHHhCCCccccccc---hHHHHH
Confidence            9999999999988765 455555 56666777665556778999999999999999999999988754322   123333


Q ss_pred             HHHHHHHH----------H----HHHH---HHHHHhHHHHHHHHHHHHHHHHHHHHHhcccc----ccccchhhHHHHHh
Q 047974          208 VDDACEAI----------L----IRHL---EKKLANGWRTIDQFWEKQKSMKQEEIEKGMEA----KEDEGIYSLLNCYL  266 (497)
Q Consensus       208 ~~~~~~~~----------~----~~~~---~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~----~~~~~~~dll~~ll  266 (497)
                      +.......          +    ++.+   .++..++.+.+.++..++++.++...+.....    .......|+++.++
T Consensus       302 ~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~l~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~dil~~Ll  381 (633)
T PLN02738        302 VYTVLREAEDRSVSPIPVWEIPIWKDISPRQRKVAEALKLINDTLDDLIAICKRMVEEEELQFHEEYMNERDPSILHFLL  381 (633)
T ss_pred             HHHHHHHHHHHhhcchhhhhhhHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhcccccccchHHHHHH
Confidence            32222110          0    0001   12333455566666666666554432221110    00123458999998


Q ss_pred             cCCCCCCCCCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhhcccCCCCCCCCCChhhhhcchh
Q 047974          267 SGHEVTGPTPAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRNFSQEGFNKPPLVRLNELNKLVY  346 (497)
Q Consensus       267 ~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~l~~lp~  346 (497)
                      +..    ..++++++.++++.+++||+|||+.+++|++++|++||++|+||++|++++++      +..++++++++|||
T Consensus       382 ~~~----~~ls~~~L~~e~~~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~------~~~~t~edL~kLPY  451 (633)
T PLN02738        382 ASG----DDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLG------DRFPTIEDMKKLKY  451 (633)
T ss_pred             HcC----CCCCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcC------CCCCCHHHHccCHH
Confidence            764    24899999999999999999999999999999999999999999999999984      25679999999999


Q ss_pred             HHHHHHHhhcCCCCCCcccccccCCCcccCCeeeCCCcEEEEeccccccCCCCCCCCCCCCCCCCccCCCCC-ccCCCCC
Q 047974          347 LHAALCETLRLYPPVPFEIRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWGEDCREFKPERWITEDGR-IRHEPPH  425 (497)
Q Consensus       347 l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~-~~~~~~~  425 (497)
                      |+|||+|+||++|+++...|++.+|+++ +||.|||||.|+++.+.+||||++| +||++|+||||+..+.. .......
T Consensus       452 L~AVIkEtLRL~p~~p~~~R~a~~d~~i-~gy~IPkGT~V~~s~~~ihrdp~if-pdP~~F~PERWl~~~~~~~~~~~~~  529 (633)
T PLN02738        452 TTRVINESLRLYPQPPVLIRRSLENDML-GGYPIKRGEDIFISVWNLHRSPKHW-DDAEKFNPERWPLDGPNPNETNQNF  529 (633)
T ss_pred             HHHHHHHHHhcCCCccccceeeccCceE-CCEEECCCCEEEecHHHHhCCcccc-CCccccCcccCCCCCCCccccCCCC
Confidence            9999999999999999988998887775 9999999999999999999999999 99999999999853211 1122456


Q ss_pred             cccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCcc-ceeeeeEEEeecCceEEEEEecCC
Q 047974          426 KFFSFNAGPRICIGKDIAFTLMKATAASIIHNYDVQVVKNHP-VTYNLSIGFRMKHGLLARVSKRSA  491 (497)
Q Consensus       426 ~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~r~~  491 (497)
                      .|+|||.|+|.|+|++||++|++++++.|+++|+|++.++.+ .....+.+..+++++++++++|..
T Consensus       530 ~~vpFG~G~R~CiG~~lA~~El~l~LA~Llr~F~~el~~~~~~~~~~~~~~~~p~~~l~v~l~~R~~  596 (633)
T PLN02738        530 SYLPFGGGPRKCVGDMFASFENVVATAMLVRRFDFQLAPGAPPVKMTTGATIHTTEGLKMTVTRRTK  596 (633)
T ss_pred             ceeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeeEeCCCCCCcccccceEEeeCCCcEEEEEECCC
Confidence            899999999999999999999999999999999999986542 333446788889999999999964


No 26 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=7e-71  Score=542.03  Aligned_cols=437  Identities=27%  Similarity=0.432  Sum_probs=348.0

Q ss_pred             CCCCCcccchhhHHHHhhccchHHHHHHHHHHHhCCeeEEeeecccCcceEEEcChhhHHHhhhcCCccccCCcccccc-
Q 047974           28 NPTPWNLPLLGMLASVILNINQLHDKVAQILEKTKGSFMIKGSWVAQYDMFLTSDPANVQHIMSTNFSKYHKGSEGRKR-  106 (497)
Q Consensus        28 ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~k~g~v~~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~~~~~~~~~~-  106 (497)
                      ||||+++|++||+.++.. .++++.++.+++++||++|++   +++++++++|+||+.+++|+.++...+...+..... 
T Consensus         1 Ppgp~~~p~~G~~~~~~~-~~~~~~~~~~~~~kyG~i~~~---~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~   76 (463)
T PF00067_consen    1 PPGPPPLPILGNLLQFRR-KGNPHEFFRELHKKYGPIFRI---WPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFE   76 (463)
T ss_dssp             SSCSSSBTTTBTHHHHHT-THHHHHHHHHHHHHHTSEEEE---EETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHH
T ss_pred             CcCCCCcCceeEHHHhcC-CCcHHHHHHHHHHHhCCEEEE---eEecccccccccchhhccccccccccccccccccccc
Confidence            899999999999999975 356889999999999999999   999999999999999999999875455543221111 


Q ss_pred             --c-cccCCcCeeecCCchHHHHHHhhhcccCHH-HHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHHHHHHHHH
Q 047974          107 --F-DIFGETGLFNSDFDEWKHQRKLARAFINHQ-KFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLLKRTTFDF  182 (497)
Q Consensus       107 --~-~~~g~~~l~~~~~~~w~~~R~~~~~~f~~~-~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~v  182 (497)
                        . ...|. +++..+++.|+.+|+.+.+.|+.. .+ .+. +.+++. .+.+.+.+.+....+..+|+.++++.+++++
T Consensus        77 ~~~~~~~~~-~l~~~~~~~~~~~R~~~~~~~~~~~~~-~~~-~~i~~~-~~~l~~~l~~~~~~~~~vd~~~~~~~~~~d~  152 (463)
T PF00067_consen   77 IFRGPFGGK-GLFFSDGERWRRQRRLLAPAFSSKKIL-KLE-PLIDEE-AEELIDQLRKKAGSSGPVDLFDWLRRFALDV  152 (463)
T ss_dssp             HHHHHHTTT-SSTTSSHHHHHHHHHHHHHHHSHHHHH-HHH-HHHHHH-HHHHHHHHHHTTTSESEEEHHHHHHHHHHHH
T ss_pred             ccccccccc-ccccccccccccccccccccccccccc-ccc-cccccc-cccccccccccccccceeeeecccccccccc
Confidence              1 34455 899999999999999999999988 44 443 445555 5677777777655555899999999999999


Q ss_pred             HHHhhcCCCCCCCCCCCCCCChHHHHHHHHHHH---------HHHHH-------HHHHHhHHHHHHHHHHHHHHHHHHHH
Q 047974          183 ACLIATGHNPNSLSVGFPEMGFPDAVDDACEAI---------LIRHL-------EKKLANGWRTIDQFWEKQKSMKQEEI  246 (497)
Q Consensus       183 ~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~-------~~~~~~~~~~~~~~~~~~i~~~~~~~  246 (497)
                      ++.++||.+++..+... ...+.+.+..+....         ..+++       .+...++.+.+.+++.+.++++++..
T Consensus       153 i~~~~fG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  231 (463)
T PF00067_consen  153 IGRVLFGKDFGSLDDED-FEEFLEAFDELFELLSNFFWNLPFFFPWLKYLPTPLFRRFKRARDRLRKYIKEIIEERREEL  231 (463)
T ss_dssp             HHHHHHSSHHHGTTHHH-HHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHSH
T ss_pred             cccccccceeeeccccc-cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            99999999866433211 112333333332111         11111       45556677888889999998888877


Q ss_pred             HhccccccccchhhHHHHHhcCC-CCCC-CCCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhh
Q 047974          247 EKGMEAKEDEGIYSLLNCYLSGH-EVTG-PTPAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRN  324 (497)
Q Consensus       247 ~~~~~~~~~~~~~dll~~ll~~~-~~~~-~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~  324 (497)
                      ..+     .....|+++.++... +.++ ..++++++.++++.+++||+|||+.+++|++++|++||++|+++++||+++
T Consensus       232 ~~~-----~~~~~d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~  306 (463)
T PF00067_consen  232 DDG-----DESRRDLLDSLLQASSDSDGPSGLSDEEIAAELLTLLFAGHDTTASTLSWTLYELAKNPEVQEKLREEIDSV  306 (463)
T ss_dssp             HSS-----SSSCSSHHHHHHHHHHTTTTTSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHH
T ss_pred             ccc-----cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            643     124688999999886 3333 379999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCCCCCCCChhhhhcchhHHHHHHHhhcCCCCCC-cccccccCCCcccCCeeeCCCcEEEEeccccccCCCCCCCC
Q 047974          325 FSQEGFNKPPLVRLNELNKLVYLHAALCETLRLYPPVP-FEIRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWGED  403 (497)
Q Consensus       325 ~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~-~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~  403 (497)
                      .+     .+..++.+++++||||+|||+||||++|+++ ...|.+.+|.++ +||.|||||.|+++.+++|+||++| +|
T Consensus       307 ~~-----~~~~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l-~g~~ip~gt~v~~~~~~~~~d~~~~-~d  379 (463)
T PF00067_consen  307 LG-----DGREITFEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTL-GGYFIPKGTIVIVSIYALHRDPEYF-PD  379 (463)
T ss_dssp             TT-----TSSSHHHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEE-TTEEEETTSEEEEEHHHHTTSTTTS-SS
T ss_pred             cc-----cccccccccccccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccc-cc
Confidence            83     3457899999999999999999999999999 667888887776 8899999999999999999999999 99


Q ss_pred             CCCCCCCCccCCCCCccCCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCccceeeee--EEEeecCc
Q 047974          404 CREFKPERWITEDGRIRHEPPHKFFSFNAGPRICIGKDIAFTLMKATAASIIHNYDVQVVKNHPVTYNLS--IGFRMKHG  481 (497)
Q Consensus       404 p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~--~~~~~~~~  481 (497)
                      |++|+||||++.++ ........|+|||.|+|.|+|++||++|+++++++||++||+++.++.+......  ....|+.+
T Consensus       380 p~~F~P~R~~~~~~-~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~  458 (463)
T PF00067_consen  380 PDEFDPERFLDERG-ISNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFDFELVPGSEPEPQEQQNGFLLPPKP  458 (463)
T ss_dssp             TTS--TTGGBTTTS-TBCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEEEEESTTSSGGEEECSCSSSEEESS
T ss_pred             cccccccccccccc-ccccccccccccccccccchHHHHHHHHHHHHHHHHHHhCEEEECCCCCCCCccccCceEeeCCC
Confidence            99999999998865 1223678999999999999999999999999999999999999976544322222  34556677


Q ss_pred             eEEEE
Q 047974          482 LLARV  486 (497)
Q Consensus       482 ~~~~~  486 (497)
                      +.|.|
T Consensus       459 ~~~~~  463 (463)
T PF00067_consen  459 LKVKF  463 (463)
T ss_dssp             SEEEE
T ss_pred             cEEeC
Confidence            87765


No 27 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=1.5e-68  Score=522.77  Aligned_cols=447  Identities=16%  Similarity=0.245  Sum_probs=332.9

Q ss_pred             cCCCCCcccchhhHHHHhhccchHHHHHHHHHHHh-CCeeEEeeecccCcceEEEcChhhHHHhhhcCCccccCCccccc
Q 047974           27 INPTPWNLPLLGMLASVILNINQLHDKVAQILEKT-KGSFMIKGSWVAQYDMFLTSDPANVQHIMSTNFSKYHKGSEGRK  105 (497)
Q Consensus        27 ~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~k~-g~v~~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~~~~~~~~~  105 (497)
                      +||||+++|++||++++..+... ..++....++| |++|++   ++|++++|+|+||+.+++++.++...|.+++....
T Consensus        41 ~PPgp~~~P~iGnl~~l~~~~~~-~~~~~~~~~~~~g~i~~~---~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~~~~  116 (534)
T PLN03018         41 LPPGPPGWPILGNLPELIMTRPR-SKYFHLAMKELKTDIACF---NFAGTHTITINSDEIAREAFRERDADLADRPQLSI  116 (534)
T ss_pred             CCcCCCCCCeeccHHHhccCCCc-chhHHHHHHHhCCCeEEE---EeCCccEEEECCHHHHHHHHHhCcHhhcCCCCchh
Confidence            79999999999999987532111 12455555565 799999   99999999999999999999987677887764432


Q ss_pred             cccccCC--cCeeec-CCchHHHHHHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHHHHHHHHH
Q 047974          106 RFDIFGE--TGLFNS-DFDEWKHQRKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLLKRTTFDF  182 (497)
Q Consensus       106 ~~~~~g~--~~l~~~-~~~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~v  182 (497)
                      . ..++.  .+++++ +|+.|+++|+++++.|...+....+..+.+.+ .+.+.+.+.+..+.+.++|+.+.+..+++++
T Consensus       117 ~-~~l~~~~~~i~~~~~G~~Wk~~Rk~l~~~~~~~~~~~~~~~~~~~~-~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~v  194 (534)
T PLN03018        117 M-ETIGDNYKSMGTSPYGEQFMKMKKVITTEIMSVKTLNMLEAARTIE-ADNLIAYIHSMYQRSETVDVRELSRVYGYAV  194 (534)
T ss_pred             h-hhhccCCCceEecCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH-HHHHHHHHHHhcccCCceeHHHHHHHHHHHH
Confidence            2 22333  146665 49999999999999876655555555444333 4556666665334455799999999999999


Q ss_pred             HHHhhcCCCCCCCCCCCC-CCC----hHHHHHHHHHHH-----------HHHHH--------HHHHHhHHHHHHHHHHHH
Q 047974          183 ACLIATGHNPNSLSVGFP-EMG----FPDAVDDACEAI-----------LIRHL--------EKKLANGWRTIDQFWEKQ  238 (497)
Q Consensus       183 ~~~~~fG~~~~~~~~~~~-~~~----~~~~~~~~~~~~-----------~~~~~--------~~~~~~~~~~~~~~~~~~  238 (497)
                      ++.++||.+++..+.... ...    +...+.......           +.+++        ..+.......+.+++.+.
T Consensus       195 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (534)
T PLN03018        195 TMRMLFGRRHVTKENVFSDDGRLGKAEKHHLEVIFNTLNCLPGFSPVDYVERWLRGWNIDGQEERAKVNVNLVRSYNNPI  274 (534)
T ss_pred             HHHHHhCCccccccccccccccchhHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhhcccchHHHHHHHHHHHHHHHHHH
Confidence            999999998754322110 111    111111111100           00111        112233445677888888


Q ss_pred             HHHHHHHHHhccccccccchhhHHHHHhcCCCCCCC-CCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHH
Q 047974          239 KSMKQEEIEKGMEAKEDEGIYSLLNCYLSGHEVTGP-TPAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKI  317 (497)
Q Consensus       239 i~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~-~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l  317 (497)
                      ++++++.......   .....|+++.+++..++++. .+++++++.++..+++||+|||+.+++|++++|+.||++|+++
T Consensus       275 i~~~~~~~~~~~~---~~~~~d~l~~ll~~~~~~~~~~ls~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~P~~q~kl  351 (534)
T PLN03018        275 IDERVELWREKGG---KAAVEDWLDTFITLKDQNGKYLVTPDEIKAQCVEFCIAAIDNPANNMEWTLGEMLKNPEILRKA  351 (534)
T ss_pred             HHHHHHHhhhccC---CCCcccHHHHHHHhhcccCCCCCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHH
Confidence            8887764322110   01246899999976543333 4899999999999999999999999999999999999999999


Q ss_pred             HHHHHhhcccCCCCCCCCCChhhhhcchhHHHHHHHhhcCCCCCCccc-ccccCCCcccCCeeeCCCcEEEEeccccccC
Q 047974          318 REELKRNFSQEGFNKPPLVRLNELNKLVYLHAALCETLRLYPPVPFEI-RIPLQPDVLPSGHQVNQNTHVLISAYSMARM  396 (497)
Q Consensus       318 ~~Ei~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~-r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d  396 (497)
                      ++||+++++     .++.++.+++.+||||+|||+|+||++|+++... |.+.+|.++ +||.|||||.|+++.+++|||
T Consensus       352 ~~Ei~~v~~-----~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d~~i-~G~~IpkGt~V~~~~~~~~~d  425 (534)
T PLN03018        352 LKELDEVVG-----KDRLVQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTL-GGYFIPKGSHIHVCRPGLGRN  425 (534)
T ss_pred             HHHHHHHhC-----CCCCCCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccCCCeeE-CCEEECCCCEEEEChHHhcCC
Confidence            999999984     3457899999999999999999999999999875 556666555 999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCccCCCCCcc----CCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCc-cce--
Q 047974          397 TSVWGEDCREFKPERWITEDGRIR----HEPPHKFFSFNAGPRICIGKDIAFTLMKATAASIIHNYDVQVVKNH-PVT--  469 (497)
Q Consensus       397 ~~~~g~~p~~F~P~Rfl~~~~~~~----~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~-~~~--  469 (497)
                      |++| +||++|+||||+++++...    ...+..|+|||+|+|.|+|++||++|+++++++|+++|++++.++. +..  
T Consensus       426 p~~~-~~p~~F~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~  504 (534)
T PLN03018        426 PKIW-KDPLVYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLARFLQGFNWKLHQDFGPLSLE  504 (534)
T ss_pred             cccC-CCccccCCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceEEeCCCCCCCCcc
Confidence            9999 9999999999997543211    1245789999999999999999999999999999999999987653 221  


Q ss_pred             eeeeEEEeecCceEEEEEecC
Q 047974          470 YNLSIGFRMKHGLLARVSKRS  490 (497)
Q Consensus       470 ~~~~~~~~~~~~~~~~~~~r~  490 (497)
                      ...+ +...+.+++|++++|.
T Consensus       505 ~~~~-~~~~p~~~~v~~~~R~  524 (534)
T PLN03018        505 EDDA-SLLMAKPLLLSVEPRL  524 (534)
T ss_pred             cccc-ceecCCCeEEEEEecc
Confidence            2223 3345679999999994


No 28 
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=1.4e-69  Score=523.26  Aligned_cols=432  Identities=16%  Similarity=0.240  Sum_probs=337.7

Q ss_pred             cCCCCCcccchhhHHHHhhcc--chHHHHHHHHHHHhCCeeEEeeecccCcceEEEcChhhHHHhhhcCCccccCCcccc
Q 047974           27 INPTPWNLPLLGMLASVILNI--NQLHDKVAQILEKTKGSFMIKGSWVAQYDMFLTSDPANVQHIMSTNFSKYHKGSEGR  104 (497)
Q Consensus        27 ~ppgp~~~P~~G~~~~~~~~~--~~~~~~~~~~~~k~g~v~~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~~~~~~~~  104 (497)
                      +||||.++|++||++++....  .+++.++.+++++||++|++   +++++++++++||+.+++++.++...|.++.. .
T Consensus        31 lppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~---~l~~~~~vvv~~pe~~~~il~~~~~~f~~~~~-~  106 (472)
T PLN02987         31 LPPGSLGLPLVGETLQLISAYKTENPEPFIDERVARYGSLFMT---HLFGEPTVFSADPETNRFILQNEGKLFECSYP-G  106 (472)
T ss_pred             CcCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhchhhhh---hhcCCCeEEEeCHHHHHHHHhCCCceEEecCc-H
Confidence            788999999999999875321  34778889999999999999   99999999999999999999987666755432 2


Q ss_pred             ccccccCCcCeeecCCchHHHHHHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHHHHHHHHHHH
Q 047974          105 KRFDIFGETGLFNSDFDEWKHQRKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLLKRTTFDFAC  184 (497)
Q Consensus       105 ~~~~~~g~~~l~~~~~~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~v~~  184 (497)
                      ....++|..|+++++|+.|+++|+++...++.+.+..+....+    .+.+...+++.   .+.+++.+.+.++++++++
T Consensus       107 ~~~~~lg~~~l~~~~g~~wr~~R~~~~~f~~~~~~~~~~~~~~----~~~~~~~~~~~---~~~v~~~~~~~~~t~~vi~  179 (472)
T PLN02987        107 SISNLLGKHSLLLMKGNLHKKMHSLTMSFANSSIIKDHLLLDI----DRLIRFNLDSW---SSRVLLMEEAKKITFELTV  179 (472)
T ss_pred             HHHHHhCcccccccCcHHHHHHHHHHHHhcChHHHHHHHHHHH----HHHHHHHHHhh---ccceehHHHHHHHHHHHHH
Confidence            2225556448888999999999999876445455554332111    22222222221   2468999999999999999


Q ss_pred             HhhcCCCCCCCCCCCCCCChHHHHHHHHHHHH---HH---HHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccccccccch
Q 047974          185 LIATGHNPNSLSVGFPEMGFPDAVDDACEAIL---IR---HLEKKLANGWRTIDQFWEKQKSMKQEEIEKGMEAKEDEGI  258 (497)
Q Consensus       185 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  258 (497)
                      +++||.+.....     ..+.+.+........   ..   ...++..++.+++.+++.+.++++++....+     ....
T Consensus       180 ~~~fg~~~~~~~-----~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~-----~~~~  249 (472)
T PLN02987        180 KQLMSFDPGEWT-----ESLRKEYVLVIEGFFSVPLPLFSTTYRRAIQARTKVAEALTLVVMKRRKEEEEG-----AEKK  249 (472)
T ss_pred             HHHcCCCChHHH-----HHHHHHHHHHHhhhhcCCCcCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhcc-----Cccc
Confidence            999997653211     122222222211111   01   1145667788999999999999987654322     0134


Q ss_pred             hhHHHHHhcCCCCCCCCCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhhcccCCCCCCCCCCh
Q 047974          259 YSLLNCYLSGHEVTGPTPAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRNFSQEGFNKPPLVRL  338 (497)
Q Consensus       259 ~dll~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~  338 (497)
                      .|+++.+++..+    .++++++.++++.+++||+|||+.+++|++++|++||++|+++++|++++.+..  +.+..++.
T Consensus       250 ~d~l~~ll~~~~----~~~~~ei~~~~~~l~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~E~~~~~~~~--~~~~~~~~  323 (472)
T PLN02987        250 KDMLAALLASDD----GFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHEKIRAMK--SDSYSLEW  323 (472)
T ss_pred             ccHHHHHHhcCC----CCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHHhChHHHHHHHHHHHHHHccc--CCCCCCCH
Confidence            689999997642    489999999999999999999999999999999999999999999999987432  12345789


Q ss_pred             hhhhcchhHHHHHHHhhcCCCCCCcccccccCCCcccCCeeeCCCcEEEEeccccccCCCCCCCCCCCCCCCCccCCCCC
Q 047974          339 NELNKLVYLHAALCETLRLYPPVPFEIRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWGEDCREFKPERWITEDGR  418 (497)
Q Consensus       339 ~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~  418 (497)
                      +++.+|||++||++|+||++|+++...|++.+|.++ +||.|||||.|+++.+.+|+||++| +||++|+||||+++++.
T Consensus       324 ~~l~~lpyl~a~i~EtLRl~p~~~~~~R~~~~d~~~-~G~~ip~Gt~v~~~~~~~~~d~~~~-~~p~~F~PeRfl~~~~~  401 (472)
T PLN02987        324 SDYKSMPFTQCVVNETLRVANIIGGIFRRAMTDIEV-KGYTIPKGWKVFASFRAVHLDHEYF-KDARTFNPWRWQSNSGT  401 (472)
T ss_pred             HHHhcChHHHHHHHHHHHccCCcCCccccCCCCeeE-CCEEECCCCEEEEehHHhhCCcccC-CCccccCcccCCCCCCC
Confidence            999999999999999999999999878888887666 9999999999999999999999999 99999999999975332


Q ss_pred             ccCCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCccceeeeeEEEeecCceEEEEEecCC
Q 047974          419 IRHEPPHKFFSFNAGPRICIGKDIAFTLMKATAASIIHNYDVQVVKNHPVTYNLSIGFRMKHGLLARVSKRSA  491 (497)
Q Consensus       419 ~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  491 (497)
                      .  .....++|||+|+|.|+|++||++|++++++.|+++|++++.++.+..+  ..+.+|.+++++++++|+-
T Consensus       402 ~--~~~~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~--~~~~~p~~~~~~~~~~r~~  470 (472)
T PLN02987        402 T--VPSNVFTPFGGGPRLCPGYELARVALSVFLHRLVTRFSWVPAEQDKLVF--FPTTRTQKRYPINVKRRDV  470 (472)
T ss_pred             C--CCCcceECCCCCCcCCCcHHHHHHHHHHHHHHHHhceEEEECCCCceee--cccccCCCCceEEEEeccc
Confidence            1  1346899999999999999999999999999999999999987665433  4588888899999999864


No 29 
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=9.6e-69  Score=526.98  Aligned_cols=437  Identities=15%  Similarity=0.224  Sum_probs=339.3

Q ss_pred             ccCCCCCcccchhhHHHHhhc--cchHHHHHHHHHHHhCC--eeEEeeecccCcceEEEcChhhHHHhhhcCCccccCCc
Q 047974           26 KINPTPWNLPLLGMLASVILN--INQLHDKVAQILEKTKG--SFMIKGSWVAQYDMFLTSDPANVQHIMSTNFSKYHKGS  101 (497)
Q Consensus        26 ~~ppgp~~~P~~G~~~~~~~~--~~~~~~~~~~~~~k~g~--v~~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~~~~~  101 (497)
                      ++||||+++|++|+++++...  .++++.++.+++++||+  +|++   ++++.+.++++||+.+++++.++ ..|.++.
T Consensus        42 ~lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~---~~~~~~~vvv~~pe~~~~vl~~~-~~f~~~~  117 (490)
T PLN02302         42 PLPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKA---FMFGQPTVLVTTPEACKRVLTDD-DAFEPGW  117 (490)
T ss_pred             CCcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceee---ecCCCCeEEEcCHHHHHHHHcCC-CccccCC
Confidence            389999999999999988653  24578899999999997  6887   89999999999999999999876 5565442


Q ss_pred             cccccccccCCcCeeecCCchHHHHHHhhhcccC-HHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHHHHHHH
Q 047974          102 EGRKRFDIFGETGLFNSDFDEWKHQRKLARAFIN-HQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLLKRTTF  180 (497)
Q Consensus       102 ~~~~~~~~~g~~~l~~~~~~~w~~~R~~~~~~f~-~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~  180 (497)
                      ... ....+|..++...+|+.|+++|+.+.+.|+ .+.++.+.+ .+++.+. .+.+.+.   . ++.+|+.+.+..+++
T Consensus       118 ~~~-~~~~~g~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~~~~-~i~~~v~-~~~~~~~---~-~~~v~~~~~~~~~~~  190 (490)
T PLN02302        118 PES-TVELIGRKSFVGITGEEHKRLRRLTAAPVNGPEALSTYIP-YIEENVK-SCLEKWS---K-MGEIEFLTELRKLTF  190 (490)
T ss_pred             chh-HHHHhccccccccCcHHHHHHHHHHHhccCCHHHHHHHHH-HHHHHHH-HHHHHhc---C-CCCEehHHHHHHHHH
Confidence            211 113456535666889999999999999995 677877654 4555533 3333332   2 245999999999999


Q ss_pred             HHHHHhhcCCCCCCCCCCCCCCChHHHHHHHHHHHH------HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhcccccc
Q 047974          181 DFACLIATGHNPNSLSVGFPEMGFPDAVDDACEAIL------IRHLEKKLANGWRTIDQFWEKQKSMKQEEIEKGMEAKE  254 (497)
Q Consensus       181 ~v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  254 (497)
                      +++++++||.+.+..     ...+.+.+........      ......+..++.+.+.+++.+.++++++....+.    
T Consensus       191 ~vi~~~~~G~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~----  261 (490)
T PLN02302        191 KIIMYIFLSSESELV-----MEALEREYTTLNYGVRAMAINLPGFAYHRALKARKKLVALFQSIVDERRNSRKQNI----  261 (490)
T ss_pred             HHHHHHHcCCCChHH-----HHHHHHHHHHHHHHhhhCCcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhccC----
Confidence            999999999865321     1112121211111100      0011234456678888999999988876543221    


Q ss_pred             ccchhhHHHHHhcCCCCCCCCCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhhcccCCCCCCC
Q 047974          255 DEGIYSLLNCYLSGHEVTGPTPAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRNFSQEGFNKPP  334 (497)
Q Consensus       255 ~~~~~dll~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~  334 (497)
                      .....|+++.+++..++++..++++++.++++.+++||+|||+.+++|++++|++||++|+|+++|++++.+... ....
T Consensus       262 ~~~~~d~l~~ll~~~~~~~~~~~~~~i~~~~~~~~~Ag~dtta~~l~~~l~~L~~~P~~~~kl~~E~~~v~~~~~-~~~~  340 (490)
T PLN02302        262 SPRKKDMLDLLLDAEDENGRKLDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVLQKAKAEQEEIAKKRP-PGQK  340 (490)
T ss_pred             CCCcCCHHHHHHhhhccCCCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCC-CCCC
Confidence            123578999999875545556899999999999999999999999999999999999999999999999985321 1122


Q ss_pred             CCChhhhhcchhHHHHHHHhhcCCCCCCcccccccCCCcccCCeeeCCCcEEEEeccccccCCCCCCCCCCCCCCCCccC
Q 047974          335 LVRLNELNKLVYLHAALCETLRLYPPVPFEIRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWGEDCREFKPERWIT  414 (497)
Q Consensus       335 ~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~  414 (497)
                      .++.+++++||||+|||+|++|++|+++...|++.+|.++ +||.||||+.|+++.+++||||++| +||++|+||||++
T Consensus       341 ~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~~-~g~~Ip~Gt~v~~~~~~~~rd~~~~-~dP~~F~PeR~~~  418 (490)
T PLN02302        341 GLTLKDVRKMEYLSQVIDETLRLINISLTVFREAKTDVEV-NGYTIPKGWKVLAWFRQVHMDPEVY-PNPKEFDPSRWDN  418 (490)
T ss_pred             CCCHHHHhcChHHHHHHHHHHHhCCCcccchhcccCCEeE-CCEEECCCCEEEeeHHHhcCCcccC-CCccccChhhcCC
Confidence            3789999999999999999999999999888888877655 9999999999999999999999999 9999999999996


Q ss_pred             CCCCccCCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCccceeeeeEEEeecCceEEEEEecCC
Q 047974          415 EDGRIRHEPPHKFFSFNAGPRICIGKDIAFTLMKATAASIIHNYDVQVVKNHPVTYNLSIGFRMKHGLLARVSKRSA  491 (497)
Q Consensus       415 ~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  491 (497)
                      ..     ..+..++|||+|+|.|+|++||.+|++++++.|+++|++++.++.. ......+..|.+++++++++|..
T Consensus       419 ~~-----~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~-~~~~~~~~~p~~~~~~~~~~~~~  489 (490)
T PLN02302        419 YT-----PKAGTFLPFGLGSRLCPGNDLAKLEISIFLHHFLLGYRLERLNPGC-KVMYLPHPRPKDNCLARITKVAS  489 (490)
T ss_pred             CC-----CCCCCccCCCCCCcCCCcHHHHHHHHHHHHHHHHhcCeeEEcCCCC-cceeCCCCCCCCCceEEEEeccC
Confidence            42     1456899999999999999999999999999999999999986431 22223347788899999999864


No 30 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=2.2e-69  Score=478.13  Aligned_cols=438  Identities=17%  Similarity=0.260  Sum_probs=350.6

Q ss_pred             cCCCCCc-ccchhhHHHHhhccchHHHHHHHHHHHhCCeeEEeeecccCcceEEEcChhhHHHhhhcCCccccCCccccc
Q 047974           27 INPTPWN-LPLLGMLASVILNINQLHDKVAQILEKTKGSFMIKGSWVAQYDMFLTSDPANVQHIMSTNFSKYHKGSEGRK  105 (497)
Q Consensus        27 ~ppgp~~-~P~~G~~~~~~~~~~~~~~~~~~~~~k~g~v~~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~~~~~~~~~  105 (497)
                      .||.-.+ +||+|++.+|.++   +.+++++..+|||+||++   .++|+.+.++.+|+....+++.....++-...+..
T Consensus        32 ~PPli~gwiP~lG~a~~fgk~---P~eFl~~~~~K~GdVFTv---~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~~~~~  105 (486)
T KOG0684|consen   32 EPPLIKGWIPWLGSALAFGKD---PLEFLRECRKKYGDVFTV---LLMGKYMTFLLGPEGYDFVFKAKLADLDFEEAYSK  105 (486)
T ss_pred             CCcccccCcchhhHHHHhccC---HHHHHHHHHHhcCCeEEE---EEcCcEEEEEeCchhhHHHHcCcccccCHHHHHHH
Confidence            7887776 5999999999877   899999999999999999   89999999999999999999876445554444544


Q ss_pred             cc-cccCCcCee-ecCCchHHHHHHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHHHHHHHHHH
Q 047974          106 RF-DIFGETGLF-NSDFDEWKHQRKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLLKRTTFDFA  183 (497)
Q Consensus       106 ~~-~~~g~~~l~-~~~~~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~v~  183 (497)
                      .. ..+|+ |+. ..+.....++.+.+..++...+++++.+.++++. .+.+...+.   ++|.+-.+..++..+.+.+.
T Consensus       106 l~~~vFg~-~v~~d~~~~~~~e~~~~~k~~L~~~~lk~~~e~m~~el-~~~f~~~~~---~s~~~d~l~~~~~~ii~tAs  180 (486)
T KOG0684|consen  106 LTTPVFGK-GVVYDVPNHVMMEQKKFFKSALGGVALKSLVELMLEEL-HAYFETSLG---ESGETDGLYTFCRLIIFTAS  180 (486)
T ss_pred             hhhhhcCC-CccccCCCchHHHHHHHHHHHhchhhHHHHHHHHHHHH-HHHHhcccc---cccchhHhhhhhHHHhhhhH
Confidence            44 78888 655 4678899999999999999999999876554433 454444222   35566677788888888888


Q ss_pred             HHhhcCCCCCCCCCCCCCCChHHHHHHHHHHH--H---HH-HHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccccccccc
Q 047974          184 CLIATGHNPNSLSVGFPEMGFPDAVDDACEAI--L---IR-HLEKKLANGWRTIDQFWEKQKSMKQEEIEKGMEAKEDEG  257 (497)
Q Consensus       184 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  257 (497)
                      -.+++|+.....+++. ...+.+..+.+....  +   ++ ...+...++++.+.+.+...|.++++..+        ..
T Consensus       181 ~~ll~~e~r~~~d~~~-a~l~~dLd~~F~~~d~~FP~~LP~~~~r~~~ra~~~i~k~f~~~i~~rr~s~s--------~~  251 (486)
T KOG0684|consen  181 RLLLGGEVRDQLDADV-AKLYHDLDQGFQPFDFLFPYNLPIPLLRRRDRARKKISKIFSKIILDRRASIS--------KW  251 (486)
T ss_pred             HHhhhhhhhhhhcchH-HHHHHHHhccccchHhhcccCCCcchhhhHHHHHHHHHHHHHHHHHHHHhccc--------cc
Confidence            8788777655433210 011111111111111  1   11 11556668889999999999988887664        34


Q ss_pred             hhhHHHHHhcCCCCCCCCCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhhcccCCCCCCCCCC
Q 047974          258 IYSLLNCYLSGHEVTGPTPAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRNFSQEGFNKPPLVR  337 (497)
Q Consensus       258 ~~dll~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~  337 (497)
                      ..|+++.+++ ..++|.+.+++|++..++.++|||+.||++|.+|++++|++|||+++.+++|+++++|+    ....++
T Consensus       252 ~~dmlq~l~~-~y~dg~~~te~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~vlG~----~~~~l~  326 (486)
T KOG0684|consen  252 DNDMLQSLME-KYKDGRPTTEEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRVLGE----KKEKLT  326 (486)
T ss_pred             cHHHHHHHHH-HhhcCCcCcHHHHHHHHHHHHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhhc----cCCCCC
Confidence            5788888888 44556789999999999999999999999999999999999999999999999999974    334599


Q ss_pred             hhhhhcchhHHHHHHHhhcCCCCCCcccccccCCCcccC---CeeeCCCcEEEEeccccccCCCCCCCCCCCCCCCCccC
Q 047974          338 LNELNKLVYLHAALCETLRLYPPVPFEIRIPLQPDVLPS---GHQVNQNTHVLISAYSMARMTSVWGEDCREFKPERWIT  414 (497)
Q Consensus       338 ~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~---g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~  414 (497)
                      .+.+++||+|++||+|||||+||.+...|.+.+|.++.+   .|.||+|..|.+++..+|+||++| +||+.|+|+||++
T Consensus       327 ~d~L~~lplL~~~IkEtLRL~~p~~~~~R~v~~D~tv~~~~~~Y~Ip~G~~valsP~~~hr~peif-~dp~~Fk~dRf~~  405 (486)
T KOG0684|consen  327 YDQLKDLPLLDSCIKETLRLHPPAHSLMRKVHEDLTVPGSDGEYVIPKGDIVALSPFLLHRDPEIF-PDPEDFKPDRFLK  405 (486)
T ss_pred             HHHHhcchHHHHHHHHHHhcCCchhhHHHhhccceeeccCCcceecCCCCEEEeccccccCCcccc-CChhhCChhhccC
Confidence            999999999999999999999999999999999998855   399999999999999999999999 9999999999998


Q ss_pred             CCCCc-cCCC--CCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCccc-eeeeeEEEeecCceEEEEEecC
Q 047974          415 EDGRI-RHEP--PHKFFSFNAGPRICIGKDIAFTLMKATAASIIHNYDVQVVKNHPV-TYNLSIGFRMKHGLLARVSKRS  490 (497)
Q Consensus       415 ~~~~~-~~~~--~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~r~  490 (497)
                      ++++. +.+.  .+.|||||+|+|.|||++||.+|+++++..+|+.||+|+.++.-. -....++..|..+++++++.|+
T Consensus       406 ~~~~~~k~g~kl~yy~mpfGaGr~~CpGr~FA~~eIk~~~~l~L~~fdleLid~~~P~~d~s~~v~~P~g~v~irYK~R~  485 (486)
T KOG0684|consen  406 DNGESKKNGEKLDYYYMPFGAGRHRCPGRSFAYLEIKQFISLLLRHFDLELIDGPFPEVDYSRMVMQPEGDVRIRYKRRP  485 (486)
T ss_pred             CCcccccccccccccccccCCCcCCCCchHHHHHHHHHHHHHHHHHcceeecCCCCCCCCHHHhhcCCCCCceEEEeecC
Confidence            77654 2222  445699999999999999999999999999999999999995322 2234447788899999999986


No 31 
>PLN02648 allene oxide synthase
Probab=100.00  E-value=2.2e-59  Score=448.37  Aligned_cols=412  Identities=16%  Similarity=0.209  Sum_probs=291.6

Q ss_pred             ccCCCCCcccchhhHHHHhhc--cchHHHHHHHHHHHhCC-eeEEeeecccCcce-------EEEcChhhHHHhhhc---
Q 047974           26 KINPTPWNLPLLGMLASVILN--INQLHDKVAQILEKTKG-SFMIKGSWVAQYDM-------FLTSDPANVQHIMST---   92 (497)
Q Consensus        26 ~~ppgp~~~P~~G~~~~~~~~--~~~~~~~~~~~~~k~g~-v~~~~~~~~~~~~~-------v~v~~p~~v~~il~~---   92 (497)
                      +.|||+.+||++|++.+|...  ..++..|+.+.++|||+ ||++   .++|.|+       |+++||++++.++.+   
T Consensus        17 ~~PPg~~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~---~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~~   93 (480)
T PLN02648         17 REIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRV---NMPPGPFIAPDPRVIALLDQKSFPVLFDVSKV   93 (480)
T ss_pred             CCCCCCCCCcCcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEe---cCCCCCCCCCCCCEEEEEcCCceeeeecchhc
Confidence            469999999999999987653  24457899999999999 9999   8888666       999999999999975   


Q ss_pred             -CCccccCCccccccccccCCc---CeeecCCchHHHHHHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCce
Q 047974           93 -NFSKYHKGSEGRKRFDIFGET---GLFNSDFDEWKHQRKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKML  168 (497)
Q Consensus        93 -~~~~~~~~~~~~~~~~~~g~~---~l~~~~~~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~  168 (497)
                       +...+..  .+.....++|.+   +++..+|+.|+++|+++.+.|+ ..++.+.+ .+.+.+.+.+ +.|......+..
T Consensus        94 ~~~~~~~~--~~~~~~~l~G~~~~~s~~~~~g~~H~r~Rrll~~~f~-~~~~~~~~-~m~~~~~~~~-~~w~~~~~~~~~  168 (480)
T PLN02648         94 DKRDVFTG--TYMPSTAFTGGYRVLSYLDPSEPKHAKLKSFLFELLK-SRHRRFIP-EFRAAFAELF-DTWEAELAKKGK  168 (480)
T ss_pred             ccccccee--eeccCccccCCceeeeecCCCCchHHHHHHHHHHHHH-Hhhhhhhh-HHHHHHHHHH-HHHHHHHhhCCC
Confidence             3222332  222222477864   5667889999999999999999 57777654 4555544444 445443233456


Q ss_pred             eeHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH-H--
Q 047974          169 VDFQDLLKRTTFDFACLIATGHNPNSLSVGFPEMGFPDAVDDACEAILIRHLEKKLANGWRTIDQFWEKQKSMKQE-E--  245 (497)
Q Consensus       169 vdl~~~~~~~~~~v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~--  245 (497)
                      +|+.+.++.++++++++++||.+.+..   .....+...+..+.........       ...+..++++.+.++.. .  
T Consensus       169 vdv~~~~~~lt~~vi~~~lfG~~~~~~---~l~~~~~~~~~~~~~~~~~p~~-------~~~l~~~~~~~i~~~~~~~~~  238 (480)
T PLN02648        169 AEFNDPLDQMAFNFLCKALTGKDPSET---ALGSDGPALIQKWLALQLAPLA-------STGLPHVLEELLLHTFPLPFF  238 (480)
T ss_pred             ccccchHHHHHHHHHHHHHcCCCcchh---hhccchhHHHHHHHHHHhhHHH-------HcCchHHHHHHhhcccCCchh
Confidence            999999999999999999999866531   0112222222222110001000       01111111111111100 0  


Q ss_pred             HHhccccccccchhhHHHHHhcCCCCCCCCCchHHHHHHHHH-HHHhcCcchHHHHHHHHHHHhcChH-HHHHHHHHHHh
Q 047974          246 IEKGMEAKEDEGIYSLLNCYLSGHEVTGPTPAEKVMRDNITA-LIFATEGTTSIALTWFFWLVSKNPF-AETKIREELKR  323 (497)
Q Consensus       246 ~~~~~~~~~~~~~~dll~~ll~~~~~~~~~l~~~~i~~~~~~-~~~ag~~tt~~~l~~~l~~l~~~p~-~~~~l~~Ei~~  323 (497)
                      .......+......+.+..++....+.  .++++++.++++. +.+++++|++++++|++++|++||+ +|+++++|+++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~ll~~~~~~--~l~~~ei~~~~l~~~~~~t~~~~~~~l~~~l~~L~~~p~~v~~klr~Ei~~  316 (480)
T PLN02648        239 LVKSDYDKLYDFFRASATEALDLAEKF--GISREEALHNLLFVLGFNAFGGFKIFFPALLKWVGRAGEELQARLAEEVRS  316 (480)
T ss_pred             hhhccHHHHHHHHHHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence            000000000001112223444433222  3899999998875 4467788888899999999999995 99999999999


Q ss_pred             hcccCCCCCCCCCChhhhhcchhHHHHHHHhhcCCCCCCcccccccCCCccc---CCeeeCCCcEEEEeccccccCCCCC
Q 047974          324 NFSQEGFNKPPLVRLNELNKLVYLHAALCETLRLYPPVPFEIRIPLQPDVLP---SGHQVNQNTHVLISAYSMARMTSVW  400 (497)
Q Consensus       324 ~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~---~g~~ip~g~~v~~~~~~~~~d~~~~  400 (497)
                      +.+.    .+..++.+++++||||++||+|+||++|++++..|++.+|.++.   +||.||||+.|+++.+.+||||++|
T Consensus       317 ~~~~----~~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~~~r~a~~d~~l~~~~~g~~IpkG~~V~~~~~~~hrdp~~~  392 (480)
T PLN02648        317 AVKA----GGGGVTFAALEKMPLVKSVVYEALRIEPPVPFQYGRAREDFVIESHDAAFEIKKGEMLFGYQPLVTRDPKVF  392 (480)
T ss_pred             Hhcc----CCCCCCHHHHhcCHHHHHHHHHHHhhcCCcccccceecCCEEEecCCceEEECCCCEEEEChHHHhCCcccC
Confidence            9842    23568999999999999999999999999999999988887763   3799999999999999999999999


Q ss_pred             CCCCCCCCCCCccCCCCCccCCCCCccccc---------CCCCCCCcchHHHHHHHHHHHHHHHhhce-EEeecCc
Q 047974          401 GEDCREFKPERWITEDGRIRHEPPHKFFSF---------NAGPRICIGKDIAFTLMKATAASIIHNYD-VQVVKNH  466 (497)
Q Consensus       401 g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~F---------g~G~r~C~G~~~A~~~~~~~l~~ll~~f~-~~~~~~~  466 (497)
                       +||++|||+||+++++.    ....+++|         |+|+|.|+|++||++|++++++.|+++|+ +++.++.
T Consensus       393 -~dP~~F~PeRf~~~~~~----~~~~~~~f~~g~~~~~~G~G~R~C~G~~~A~~e~~~~la~Ll~~f~~~~l~~~~  463 (480)
T PLN02648        393 -DRPEEFVPDRFMGEEGE----KLLKYVFWSNGRETESPTVGNKQCAGKDFVVLVARLFVAELFLRYDSFEIEVDT  463 (480)
T ss_pred             -CCcceeCCCCCCCCCcc----ccccccccCCCcccCCCCCCCccCccHHHHHHHHHHHHHHHHHHhCEEeecCCc
Confidence             99999999999875322    11234444         67789999999999999999999999998 9987654


No 32 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00  E-value=7.9e-54  Score=405.71  Aligned_cols=374  Identities=21%  Similarity=0.290  Sum_probs=289.4

Q ss_pred             HHHHHHHHhCCeeEEeeecccCc--ceEEEcChhhHHHhhhcCCccccCCc---cccc-cccccCCcCeeecCCchHHHH
Q 047974           53 KVAQILEKTKGSFMIKGSWVAQY--DMFLTSDPANVQHIMSTNFSKYHKGS---EGRK-RFDIFGETGLFNSDFDEWKHQ  126 (497)
Q Consensus        53 ~~~~~~~k~g~v~~~~~~~~~~~--~~v~v~~p~~v~~il~~~~~~~~~~~---~~~~-~~~~~g~~~l~~~~~~~w~~~  126 (497)
                      ......+.||..+..   +..+.  ..+++++++++++++++.. .+++..   .... ....+|...++..||+.|.++
T Consensus        27 ~~~~~~~p~~~~~~~---~~~~~~~~~~~~s~~~~v~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~dg~~H~r~  102 (411)
T COG2124          27 FLERAEDPYGDYFTL---RLPGPGDGFWVVSRPADVREVLRDPR-FFSSALGAGLRPRLLRPVLGDGSLLTLDGPEHTRL  102 (411)
T ss_pred             hHHHHhCCCchhhhh---hccCccceEEEEcCHHHHHHHHcCcc-cccccccccccccchhhhccccceeecCCHHHHHH
Confidence            444556677777766   33333  3899999999999998862 222211   1111 235667633788999999999


Q ss_pred             HHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCChHH
Q 047974          127 RKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLLKRTTFDFACLIATGHNPNSLSVGFPEMGFPD  206 (497)
Q Consensus       127 R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~v~~~~~fG~~~~~~~~~~~~~~~~~  206 (497)
                      ||+++++|+++.++.+.+ .+++. .+.+.+.+ .  .. ..+++.+....++.++++ .+||.+.+..      ..+..
T Consensus       103 Rkl~~~~F~~~~~~~~~~-~i~~~-~~~~~~~~-~--~~-~~~~v~~~a~~l~~~vi~-~l~Gv~~~~~------~~~~~  169 (411)
T COG2124         103 RKLLAPAFTPRALRGYRP-LIREI-ADRLLDDL-W--QG-GADLVLDFAAELTLRVIA-ELLGVPLEDR------PQLLR  169 (411)
T ss_pred             HHHhccccCHHHHHHHHH-HHHHH-HHHHHHhc-c--cC-CchhHHHHhhhhhHHHHH-HHhCCCHHHH------HHHHH
Confidence            999999999999999865 45554 34333333 2  22 678899999999999999 8999876421      11222


Q ss_pred             HHHHHHHHH----HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccccccccchhhHHHHHhcCCCCCCCCCchHHHH
Q 047974          207 AVDDACEAI----LIRHLEKKLANGWRTIDQFWEKQKSMKQEEIEKGMEAKEDEGIYSLLNCYLSGHEVTGPTPAEKVMR  282 (497)
Q Consensus       207 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~l~~~~i~  282 (497)
                      .........    .......+..++...+.+++.++|++++.           ...+|+++.++...++++..++++||.
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~li~~rR~-----------~~~~dlls~l~~a~~~~~~~lsd~Ei~  238 (411)
T COG2124         170 WSDALLLRLDPDLGPEEPWRRARAARRELDAYLRALIAERRA-----------APRDDLLSLLLSAEDDGGGRLSDDEIR  238 (411)
T ss_pred             HHHHHHhccCcccCCcccHHHHHHHHHHHHHHHHHHHHHhcc-----------CCcccHHHHHHHHhhCCCCcCCHHHHH
Confidence            222221110    00111567788999999999999999982           567899999998877654479999999


Q ss_pred             HHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhhcccCCCCCCCCCChhhhhcchhHHHHHHHhhcCCCCCC
Q 047974          283 DNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRNFSQEGFNKPPLVRLNELNKLVYLHAALCETLRLYPPVP  362 (497)
Q Consensus       283 ~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~  362 (497)
                      ++++.+++||+|||+++++|+++.|++||++++++++|.+.                     ||++++++|+||++||++
T Consensus       239 ~~~~~ll~AGheTTa~~l~~a~~~L~~~P~~~~~l~~e~~~---------------------~~~~~~v~E~LR~~ppv~  297 (411)
T COG2124         239 DELITLLVAGHETTANALAWALYALLRHPDQLAKLRAEPDR---------------------PLLEAVVEETLRLYPPVP  297 (411)
T ss_pred             HHHHHHHHhhhHHHHHHHHHHHHHHHHCchHHHHHHhCcch---------------------HHHHHHHHHHHHhCCchh
Confidence            99999999999999999999999999999999999998662                     789999999999999999


Q ss_pred             cccccccCCCcccCCeeeCCCcEEEEeccccccCCCCCCCCCCCCCCCCccCCCCCccCCCCCcccccCCCCCCCcchHH
Q 047974          363 FEIRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWGEDCREFKPERWITEDGRIRHEPPHKFFSFNAGPRICIGKDI  442 (497)
Q Consensus       363 ~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~  442 (497)
                      . .++++.+++.++|+.||||+.|+++++++||||++| +||++|||+||.           ..|+|||+|+|.|+|.+|
T Consensus       298 ~-~~R~~~~d~~igg~~Ip~G~~V~~~~~~anrDp~~f-~~P~~F~p~R~~-----------~~~l~FG~G~H~ClG~~l  364 (411)
T COG2124         298 L-ARRVATEDVELGGYRIPAGTVVLLSIGAANRDPEVF-PDPDEFDPERFN-----------NAHLPFGGGPHRCLGAAL  364 (411)
T ss_pred             c-cceeccCCEeeCCEEeCCCCEEEecHhhhcCChhhC-CChhhcCCCCCC-----------CCCcCCCCCCccccCHHH
Confidence            9 554555555559999999999999999999999999 999999999986           579999999999999999


Q ss_pred             HHHHHHHHHHHHHhhceEEeecCccceeeeeEEEeecCceEEEEEec
Q 047974          443 AFTLMKATAASIIHNYDVQVVKNHPVTYNLSIGFRMKHGLLARVSKR  489 (497)
Q Consensus       443 A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  489 (497)
                      |++|++++++.++++|++....+ ........+..+..+..+.++.|
T Consensus       365 A~~E~~~~l~~ll~r~~~~~~~~-~~~~~~~~~~~~~g~~~l~v~~~  410 (411)
T COG2124         365 ARLELKVALAELLRRFPLLLLAE-PPPLVRRPTLVPRGGERLPVRRR  410 (411)
T ss_pred             HHHHHHHHHHHHHHhCchhhcCC-CCCccccccccCCCcceeeeecC
Confidence            99999999999999999888766 22233444555566666666654


No 33 
>PF12554 MOZART1:  Mitotic-spindle organizing gamma-tubulin ring associated;  InterPro: IPR022214  This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important. 
Probab=66.16  E-value=23  Score=21.85  Aligned_cols=42  Identities=17%  Similarity=0.135  Sum_probs=34.3

Q ss_pred             HHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHH
Q 047974          280 VMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREEL  321 (497)
Q Consensus       280 ~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei  321 (497)
                      ++...+..++-.|-|..+..+.-.|.+..-||+....+-.|+
T Consensus         6 d~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~el   47 (48)
T PF12554_consen    6 DVLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIKEL   47 (48)
T ss_pred             HHHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHh
Confidence            456667777888888888888888888889999988887776


No 34 
>PF08492 SRP72:  SRP72 RNA-binding domain;  InterPro: IPR013699  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=53.28  E-value=10  Score=24.57  Aligned_cols=8  Identities=50%  Similarity=1.444  Sum_probs=6.4

Q ss_pred             CCCCccCC
Q 047974          408 KPERWITE  415 (497)
Q Consensus       408 ~P~Rfl~~  415 (497)
                      ||||||.-
T Consensus        44 DPERWLP~   51 (59)
T PF08492_consen   44 DPERWLPK   51 (59)
T ss_pred             CccccCch
Confidence            78999864


No 35 
>PF09201 SRX:  SRX;  InterPro: IPR015284  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel.  This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=52.14  E-value=13  Score=28.69  Aligned_cols=24  Identities=25%  Similarity=0.376  Sum_probs=17.1

Q ss_pred             CCCcchHHHHHHHHHHHHHHHhhc
Q 047974          435 RICIGKDIAFTLMKATAASIIHNY  458 (497)
Q Consensus       435 r~C~G~~~A~~~~~~~l~~ll~~f  458 (497)
                      -.|.|+.||+.++-.++..++..-
T Consensus        18 yN~~gKKFsE~QiN~FIs~lItsP   41 (148)
T PF09201_consen   18 YNCLGKKFSETQINAFISHLITSP   41 (148)
T ss_dssp             EETTS----HHHHHHHHHHHHHS-
T ss_pred             ecccchHHHHHHHHHHHHHHhcCC
Confidence            469999999999999999999753


No 36 
>PF07886 BA14K:  BA14K-like protein;  InterPro: IPR012413 The sequences found in this family are similar to the BA14K proteins expressed by Brucella abortus (Q44701 from SWISSPROT) and by Brucella suis (Q8FVU0 from SWISSPROT). BA14K was found to be strongly immunoreactive; it induces both humoral and cellular responses in hosts throughout the infective process []. 
Probab=48.38  E-value=16  Score=20.08  Aligned_cols=16  Identities=13%  Similarity=0.474  Sum_probs=13.4

Q ss_pred             CCCcccccCCCCCCCc
Q 047974          423 PPHKFFSFNAGPRICI  438 (497)
Q Consensus       423 ~~~~~~~Fg~G~r~C~  438 (497)
                      ....|+|+.+..|.|.
T Consensus        16 ~~~Ty~~~~G~r~~C~   31 (31)
T PF07886_consen   16 RDNTYQPYDGPRRFCR   31 (31)
T ss_pred             CCCcEeCCCCccccCc
Confidence            4678999998889994


No 37 
>PF05952 ComX:  Bacillus competence pheromone ComX;  InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible.  DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=47.80  E-value=17  Score=23.29  Aligned_cols=24  Identities=17%  Similarity=0.090  Sum_probs=18.5

Q ss_pred             HHHHHHhcChHHHHHHHHHHHhhc
Q 047974          302 WFFWLVSKNPFAETKIREELKRNF  325 (497)
Q Consensus       302 ~~l~~l~~~p~~~~~l~~Ei~~~~  325 (497)
                      -++.||.+||++.+++.+.=...+
T Consensus         4 ~iV~YLv~nPevl~kl~~g~asLI   27 (57)
T PF05952_consen    4 EIVNYLVQNPEVLEKLKEGEASLI   27 (57)
T ss_pred             HHHHHHHHChHHHHHHHcCCeeEe
Confidence            357899999999999988544443


No 38 
>PF12508 DUF3714:  Protein of unknown function (DUF3714) ;  InterPro: IPR022187  Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage. 
Probab=44.38  E-value=6.2  Score=33.21  Aligned_cols=43  Identities=16%  Similarity=0.117  Sum_probs=28.3

Q ss_pred             chhHHHHHHHhhcCCCCCCcccccccCCCcccCCeeeCCCcEEEE
Q 047974          344 LVYLHAALCETLRLYPPVPFEIRIPLQPDVLPSGHQVNQNTHVLI  388 (497)
Q Consensus       344 lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~ip~g~~v~~  388 (497)
                      -..+.|||.|+.-+..-..  +|-...++..++|..|||||.++.
T Consensus        52 ~n~I~A~V~~~qtv~~Gs~--vrlRLle~i~i~g~~IPkgt~l~G   94 (200)
T PF12508_consen   52 KNTIRAVVDGTQTVVDGSR--VRLRLLEDIQIGGILIPKGTYLYG   94 (200)
T ss_pred             CCeEEEEEecceEEeCCCE--EEEEEcCceEECCEEeCCCCEEEE
Confidence            3456699999987653332  333333444449999999998875


No 39 
>COG2101 SPT15 TATA-box binding protein (TBP), component of TFIID and TFIIIB [Transcription]
Probab=42.61  E-value=19  Score=29.22  Aligned_cols=36  Identities=28%  Similarity=0.562  Sum_probs=25.1

Q ss_pred             CCCCCCCccCCCCCccCCCCCcccccCCCCCCCcchH
Q 047974          405 REFKPERWITEDGRIRHEPPHKFFSFNAGPRICIGKD  441 (497)
Q Consensus       405 ~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~  441 (497)
                      .+|+|++|-.---+. ..+..+.+-|..|+-.|-|..
T Consensus        35 aeYnP~qFpGlv~Rl-~ePk~a~LIF~SGK~VcTGaK   70 (185)
T COG2101          35 AEYNPEQFPGLVYRL-EEPKTAALIFRSGKVVCTGAK   70 (185)
T ss_pred             CccCHhHCCeeEEEe-cCCcceEEEEecCcEEEeccC
Confidence            578999983110011 125678999999999999965


No 40 
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=34.43  E-value=18  Score=22.68  Aligned_cols=11  Identities=36%  Similarity=0.700  Sum_probs=8.5

Q ss_pred             cccCCCCCCCc
Q 047974          428 FSFNAGPRICI  438 (497)
Q Consensus       428 ~~Fg~G~r~C~  438 (497)
                      .+||-|.|.|-
T Consensus        12 ~kfg~GsrsC~   22 (56)
T KOG3506|consen   12 RKFGQGSRSCR   22 (56)
T ss_pred             cccCCCCccee
Confidence            47999998763


No 41 
>cd04518 TBP_archaea archaeal TATA box binding protein (TBP): TBPs are transcription factors present in archaea and eukaryotes, that recognize promoters and initiate transcription. TBP has been shown to be an essential component of three different transcription initiation complexes: SL1, TFIID and TFIIIB, directing transcription by RNA polymerases I, II and III, respectively. TBP binds directly to the TATA box promoter element, where it nucleates polymerase assembly, thus defining the transcription start site. TBP's binding in the minor groove induces a dramatic DNA bending while its own structure barely changes. The conserved core domain of TBP, which binds to the TATA box, has a bipartite structure, with intramolecular symmetry generating a saddle-shaped structure that sits astride the DNA.
Probab=26.80  E-value=42  Score=27.73  Aligned_cols=35  Identities=23%  Similarity=0.541  Sum_probs=24.4

Q ss_pred             CCCCCCCccCCCCCccCCCCCcccccCCCCCCCcch
Q 047974          405 REFKPERWITEDGRIRHEPPHKFFSFNAGPRICIGK  440 (497)
Q Consensus       405 ~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~  440 (497)
                      .+|+|+||-.---+. ..+..+.+-|+.|+=.|.|-
T Consensus        29 ~eY~P~~fpgli~Rl-~~Pk~t~lIF~SGKiv~tGa   63 (174)
T cd04518          29 AEYNPDQFPGLVYRL-EDPKIAALIFRSGKMVCTGA   63 (174)
T ss_pred             cEECCCcCcEEEEEc-cCCcEEEEEECCCeEEEEcc
Confidence            588999983210011 12567889999999999986


No 42 
>TIGR03779 Bac_Flav_CT_M Bacteroides conjugative transposon TraM protein. Members of this protein family are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=24.21  E-value=17  Score=34.44  Aligned_cols=43  Identities=14%  Similarity=0.087  Sum_probs=28.9

Q ss_pred             chhHHHHHHHhhcCCCCCCcccc-cccCCCcccCCeeeCCCcEEEEe
Q 047974          344 LVYLHAALCETLRLYPPVPFEIR-IPLQPDVLPSGHQVNQNTHVLIS  389 (497)
Q Consensus       344 lp~l~a~i~E~lRl~p~~~~~~r-~~~~~~~~~~g~~ip~g~~v~~~  389 (497)
                      -..+.|||.|+.-+.--..  +| +..++..+ +|..|||||.|+..
T Consensus       255 ~n~I~A~V~~~qtv~~G~~--vrlRLle~~~v-~~~~ipkgt~l~g~  298 (410)
T TIGR03779       255 RNTIRACVHETQTVVDGSA--VKLRLLEPIQA-GDLVIPKGTVLYGT  298 (410)
T ss_pred             CCceEEEEcCceEEecCCE--EEEEEcCceee-CCEEecCCCEEEEE
Confidence            4567799999887653322  33 33444445 99999999988743


No 43 
>PF08285 DPM3:  Dolichol-phosphate mannosyltransferase subunit 3 (DPM3);  InterPro: IPR013174 This family corresponds to subunit 3 of dolichol-phosphate mannosyltransferase, an enzyme which generates mannosyl donors for glycosylphosphatidylinositols, N-glycan and protein O- and C-mannosylation. DPM3 is an integral membrane protein and plays a role in stabilising the dolichol-phosphate mannosyl transferase complex [].
Probab=23.43  E-value=1.1e+02  Score=21.99  Aligned_cols=29  Identities=17%  Similarity=0.180  Sum_probs=23.8

Q ss_pred             HHHHHHHHHHHhcChHHHHHHHHHHHhhc
Q 047974          297 SIALTWFFWLVSKNPFAETKIREELKRNF  325 (497)
Q Consensus       297 ~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~  325 (497)
                      ..++.|-++..-..||..+.|.+||+++-
T Consensus        53 l~~lgy~v~tFnDcpeA~~eL~~eI~eAK   81 (91)
T PF08285_consen   53 LFTLGYGVATFNDCPEAAKELQKEIKEAK   81 (91)
T ss_pred             HHHHHHhhhccCCCHHHHHHHHHHHHHHH
Confidence            45567777777789999999999999874


No 44 
>PF07849 DUF1641:  Protein of unknown function (DUF1641);  InterPro: IPR012440 Archaeal and bacterial hypothetical proteins are found in this family, with the region in question being approximately 40 residues long. 
Probab=21.50  E-value=1.1e+02  Score=18.19  Aligned_cols=20  Identities=5%  Similarity=-0.061  Sum_probs=15.4

Q ss_pred             HHHHHHHHhcChHHHHHHHH
Q 047974          300 LTWFFWLVSKNPFAETKIRE  319 (497)
Q Consensus       300 l~~~l~~l~~~p~~~~~l~~  319 (497)
                      -.|-+.-++++||+|.-|.-
T Consensus        12 gl~gl~~~l~DpdvqrgL~~   31 (42)
T PF07849_consen   12 GLFGLLRALRDPDVQRGLGF   31 (42)
T ss_pred             CHHHHHHHHcCHHHHHHHHH
Confidence            34677888999999987754


No 45 
>PRK00394 transcription factor; Reviewed
Probab=21.32  E-value=65  Score=26.81  Aligned_cols=34  Identities=26%  Similarity=0.566  Sum_probs=24.0

Q ss_pred             CCCCCCCccCCCCCccCCCCCcccccCCCCCCCcc
Q 047974          405 REFKPERWITEDGRIRHEPPHKFFSFNAGPRICIG  439 (497)
Q Consensus       405 ~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G  439 (497)
                      .+|+|+||-.---+. ..+..+.+-|..|+=.|.|
T Consensus        28 ~eYePe~fpgli~Rl-~~Pk~t~lIf~sGKiv~tG   61 (179)
T PRK00394         28 AEYNPEQFPGLVYRL-EDPKIAALIFRSGKVVCTG   61 (179)
T ss_pred             ceeCcccCceEEEEe-cCCceEEEEEcCCcEEEEc
Confidence            588999984211111 1256789999999999999


No 46 
>COG0851 MinE Septum formation topological specificity factor [Cell division and chromosome partitioning]
Probab=20.98  E-value=2.5e+02  Score=20.02  Aligned_cols=18  Identities=22%  Similarity=0.300  Sum_probs=15.3

Q ss_pred             ChHHHHHHHHHHHhhccc
Q 047974          310 NPFAETKIREELKRNFSQ  327 (497)
Q Consensus       310 ~p~~~~~l~~Ei~~~~~~  327 (497)
                      .|++...+|+||-+|+.+
T Consensus        35 ~pd~l~~Lr~eIl~VI~K   52 (88)
T COG0851          35 QPDYLEQLRKEILEVISK   52 (88)
T ss_pred             CcchHHHHHHHHHHHHHH
Confidence            488999999999999843


No 47 
>cd00418 GlxRS_core catalytic core domain of glutamyl-tRNA and glutaminyl-tRNA synthetase. Glutamyl-tRNA synthetase(GluRS)/Glutaminyl-tRNA synthetase (GlnRS) cataytic core domain. These enzymes attach Glu or Gln, respectively, to the appropriate tRNA. Like other class I tRNA synthetases, they aminoacylate the 2'-OH of the nucleotide at the 3' end of the tRNA. The core domain is based on the Rossman fold and is responsible for the ATP-dependent formation of the enzyme bound aminoacyl-adenylate. It contains the characteristic class I HIGH and KMSKS motifs, which are involved in ATP binding. These enzymes function as monomers.  Archaea, cellular organelles, and some bacteria lack GlnRS.  In these cases, the "non-discriminating" form of GluRS aminoacylates both tRNA(Glu) and tRNA(Gln) with Glu, which is converted to Gln when appropriate by a transamidation enzyme. The discriminating form of GluRS differs from GlnRS and the non-discriminating form of GluRS in their C-terminal anti-codon bind
Probab=20.72  E-value=1.9e+02  Score=25.23  Aligned_cols=55  Identities=22%  Similarity=0.397  Sum_probs=36.3

Q ss_pred             ccCCCCCcccchhhHHHHhhccchHHHHHHHHHHHhCCeeEEeeecccCcceEEEcChhhHHHhhhc
Q 047974           26 KINPTPWNLPLLGMLASVILNINQLHDKVAQILEKTKGSFMIKGSWVAQYDMFLTSDPANVQHIMST   92 (497)
Q Consensus        26 ~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~k~g~v~~~~~~~~~~~~~v~v~~p~~v~~il~~   92 (497)
                      |.+|.|.|..=+||+.....+      |+  ..+++|..|.+   ++--.+. -=+.++.++.|+..
T Consensus         5 RFAPsPtG~lHlG~~r~al~n------~l--~Ar~~~G~~iL---RieDtD~-~R~~~~~~~~I~~d   59 (230)
T cd00418           5 RFAPSPTGYLHIGHARTALFN------FA--FARKYGGKFIL---RIEDTDP-ERSRPEYVESILED   59 (230)
T ss_pred             EeCCCCCCcccHHHHHHHHHH------HH--HHHHcCCeEEE---EeCcCCC-CCCChHHHHHHHHH
Confidence            578999999999999877555      22  35678886666   4433332 23556677777643


No 48 
>KOG3302 consensus TATA-box binding protein (TBP), component of TFIID and TFIIIB [Transcription]
Probab=20.69  E-value=54  Score=27.22  Aligned_cols=57  Identities=21%  Similarity=0.382  Sum_probs=34.3

Q ss_pred             CCCCCCCccCCCCCccCCCCCcccccCCCCCCCcch-----------HHHHHHHHHHHHHHHhhceEEe
Q 047974          405 REFKPERWITEDGRIRHEPPHKFFSFNAGPRICIGK-----------DIAFTLMKATAASIIHNYDVQV  462 (497)
Q Consensus       405 ~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~-----------~~A~~~~~~~l~~ll~~f~~~~  462 (497)
                      .+|+|.||..-=-+ .+.+...-.-|..|+=.|.|.           .+|+..-++-...-+++|.+..
T Consensus        50 ~ey~Pk~~~aVimr-ir~P~~ta~I~ssGKi~ctgA~se~~ar~aark~aRilqkLgf~~~f~~fki~n  117 (200)
T KOG3302|consen   50 AEYNPKRFAAVIMR-IRSPRTTALIFSSGKIVCTGAKSEDSARLAARKYARILQKLGFPVKFRDFKINN  117 (200)
T ss_pred             cccCcccccEEEEE-EcCCceEEEEecCCcEEEeccCCHHHHHHHHHHHHHHHHHcCCCceehheeeEE
Confidence            67899998521001 123567788999999999973           3444444444444445555443


No 49 
>PF15396 FAM60A:  Protein Family FAM60A
Probab=20.32  E-value=67  Score=27.11  Aligned_cols=18  Identities=17%  Similarity=0.420  Sum_probs=15.2

Q ss_pred             HHHHHhhhhhccCCCCCc
Q 047974           16 IFFLFLHHFRKINPTPWN   33 (497)
Q Consensus        16 ~~~~~~~~~~~~ppgp~~   33 (497)
                      .|++++.+|+++|+|-..
T Consensus        54 ACVLLVKRwKKLP~Gs~r   71 (213)
T PF15396_consen   54 ACVLLVKRWKKLPPGSKR   71 (213)
T ss_pred             HHHHHHHHHhhCCCCccc
Confidence            478999999999998753


No 50 
>TIGR03838 queuosine_YadB glutamyl-queuosine tRNA(Asp) synthetase. This protein resembles a shortened glutamyl-tRNA ligase, but its purpose is to modify tRNA(Asp) at a queuosine position in the anticodon rather than to charge a tRNA with its cognate amino acid.
Probab=20.03  E-value=1.9e+02  Score=26.05  Aligned_cols=55  Identities=16%  Similarity=0.302  Sum_probs=35.6

Q ss_pred             ccCCCCCcccchhhHHHHhhccchHHHHHHHHHHHhCCeeEEeeecccCcceEEEcChhhHHHhhhc
Q 047974           26 KINPTPWNLPLLGMLASVILNINQLHDKVAQILEKTKGSFMIKGSWVAQYDMFLTSDPANVQHIMST   92 (497)
Q Consensus        26 ~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~k~g~v~~~~~~~~~~~~~v~v~~p~~v~~il~~   92 (497)
                      +.+|.|.|..=+||+...+.|      |+  +.++||..|.+   ++--.+. -=+.++.+..|+..
T Consensus         4 RFAPSPtG~lHiG~~rtAL~n------~l--~Ar~~gG~~iL---RiEDtD~-~R~~~~~~~~I~~d   58 (272)
T TIGR03838         4 RFAPSPSGPLHFGSLVAALGS------YL--DARAHGGRWLV---RIEDLDP-PREVPGAADDILRT   58 (272)
T ss_pred             eeCCCCCCcccHHHHHHHHHH------HH--HHHHhCCEEEE---EeCcCCC-CCCChHHHHHHHHH
Confidence            578999999999999887655      33  35678887766   4433222 12455666666543


Done!