Query         047974
Match_columns 497
No_of_seqs    194 out of 2172
Neff          11.2
Searched_HMMs 29240
Date          Mon Mar 25 08:23:29 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047974.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047974hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 3ld6_A Lanosterol 14-alpha dem 100.0 4.1E-76 1.4E-80  575.5  28.6  431   27-491    12-455 (461)
  2 3k9v_A 1,25-dihydroxyvitamin D 100.0 1.7E-74 5.9E-79  568.6  39.6  434   27-489    25-482 (482)
  3 3tbg_A Cytochrome P450 2D6; mo 100.0 2.8E-75 9.6E-80  573.8  31.7  440   26-491    10-477 (479)
  4 3nxu_A Cytochrome P450 3A4; al 100.0 1.8E-74 6.3E-79  568.5  34.4  445   24-493    12-478 (485)
  5 3s79_A Cytochrome P450 19A1; o 100.0 4.1E-73 1.4E-77  561.5  39.1  433   24-491    43-497 (503)
  6 2ve3_A Putative cytochrome P45 100.0 4.5E-73 1.6E-77  550.6  32.9  429   24-490    10-444 (444)
  7 3e6i_A CYPIIE1, P450-J, cytoch 100.0 8.8E-73   3E-77  555.4  31.4  439   25-491     9-473 (476)
  8 3n9y_A Cholesterol SIDE-chain  100.0 1.5E-71 5.2E-76  548.0  38.8  443   27-494    10-479 (487)
  9 1po5_A Cytochrome P450 2B4; ox 100.0 2.7E-72 9.1E-77  550.8  32.3  435   25-491     9-474 (476)
 10 2fdv_A Cytochrome P450 2A6; CY 100.0 1.9E-72 6.6E-77  551.8  30.8  437   26-491    10-474 (476)
 11 3pm0_A Cypib1, cytochrome P450 100.0 8.5E-73 2.9E-77  560.0  27.8  445   25-491     8-485 (507)
 12 3swz_A Steroid 17-alpha-hydrox 100.0 5.2E-72 1.8E-76  551.9  31.1  437   25-491     7-480 (494)
 13 1r9o_A Cytochrome P450 2C9; mo 100.0 2.7E-72 9.2E-77  551.2  28.3  437   26-491    11-475 (477)
 14 2cib_A Cytochrome P450 51; hem 100.0 1.4E-71 4.8E-76  541.9  29.1  435   26-492     4-451 (455)
 15 2ij2_A Cytochrome P450 BM3; mo 100.0 3.3E-70 1.1E-74  534.2  37.6  432   27-491     4-453 (470)
 16 2hi4_A Cytochrome P450 1A2; CY 100.0 1.2E-71 3.9E-76  548.8  27.3  441   25-491    13-489 (495)
 17 3czh_A Cytochrome P450 2R1; vi 100.0 3.4E-71 1.2E-75  543.1  30.0  440   25-490    11-476 (481)
 18 3mdm_A Cholesterol 24-hydroxyl 100.0 8.5E-69 2.9E-73  523.7  40.1  414   49-491    11-443 (456)
 19 3gw9_A Sterol 14alpha-demethyl 100.0 6.7E-70 2.3E-74  531.1  30.3  429   25-490     2-450 (450)
 20 3dbg_A Putative cytochrome P45 100.0 1.2E-70   4E-75  537.8  24.7  426   25-489    22-461 (467)
 21 3qz1_A Steroid 21-hydroxylase; 100.0   4E-71 1.4E-75  546.3  21.6  430   26-493    29-487 (496)
 22 3i3k_A Lanosterol 14-alpha dem 100.0 4.7E-70 1.6E-74  533.1  28.1  427   25-485    10-450 (461)
 23 3v8d_A Cholesterol 7-alpha-mon 100.0   5E-66 1.7E-70  508.6  23.1  439   25-488    12-484 (491)
 24 2cd8_A Cytochrome P450 monooxy 100.0 1.9E-65 6.4E-70  494.0  25.2  404   19-494    19-433 (436)
 25 3b6h_A Prostacyclin synthase;  100.0 9.7E-65 3.3E-69  500.5  30.3  439   25-491    17-491 (498)
 26 3dax_A Cytochrome P450 7A1; ch 100.0 6.6E-66 2.3E-70  508.3  21.4  438   26-489    13-485 (491)
 27 3b98_A Prostaglandin I2 syntha 100.0 1.3E-64 4.5E-69  496.9  27.8  430   25-492    17-473 (475)
 28 1izo_A P450bsbeta, cytochrome  100.0 4.5E-63 1.5E-67  476.5  31.6  404   31-490     5-416 (417)
 29 1n97_A CYP175A1; electron tran 100.0 1.2E-62 4.1E-67  468.4  23.4  375   30-491     3-388 (389)
 30 3awm_A Fatty acid alpha-hydrox 100.0 3.4E-61 1.2E-65  463.1  31.6  399   28-489     4-413 (415)
 31 1jfb_A Nitric-oxide reductase  100.0   7E-61 2.4E-65  459.2  29.4  371   27-465     2-382 (404)
 32 1ued_A P450 OXYC, P450 monooxy 100.0 3.3E-61 1.1E-65  460.6  23.2  381   25-486     9-406 (406)
 33 2zwu_A Camphor 5-monooxygenase 100.0 7.5E-61 2.6E-65  458.5  22.2  394   25-493    10-414 (415)
 34 2jjn_A Cytochrome P450 113A1;  100.0 2.1E-59 7.2E-64  449.2  30.7  372   49-491    29-408 (411)
 35 3aba_A Cytochrome P450; oxidor 100.0 2.4E-60 8.4E-65  454.1  23.8  371   50-490    21-403 (403)
 36 2zbx_A Cytochrome P450-SU1; be 100.0 9.1E-60 3.1E-64  451.5  27.2  387   27-487     6-407 (412)
 37 1cpt_A Cytochrome P450-TERP; o 100.0 4.8E-60 1.7E-64  456.1  25.2  394   24-489     4-428 (428)
 38 3a4g_A Vitamin D hydroxylase;  100.0 1.5E-59   5E-64  449.3  28.0  374   49-493    21-405 (411)
 39 3ejb_B Biotin biosynthesis cyt 100.0 1.4E-59 4.8E-64  450.2  26.5  374   49-491    14-398 (404)
 40 1s1f_A Putative cytochrome P45 100.0 7.4E-60 2.5E-64  451.3  23.8  384   26-487     8-405 (406)
 41 3dsk_A Cytochrome P450 74A, ch 100.0 1.1E-59 3.6E-64  464.2  25.0  411   25-466    27-473 (495)
 42 2uuq_A CYP130, cytochrome P450 100.0 1.5E-59 5.1E-64  449.7  24.5  374   49-490    26-414 (414)
 43 4fb2_A P450CIN; heme, monooxyg 100.0 3.9E-59 1.3E-63  445.7  27.1  371   49-491    20-395 (398)
 44 1z8o_A 6-deoxyerythronolide B  100.0 1.2E-58   4E-63  443.0  28.5  368   49-486    15-402 (404)
 45 3nc3_A Cytochrome P450 CYPX; c 100.0 3.4E-59 1.2E-63  450.6  22.9  380   50-488    55-440 (441)
 46 2xkr_A CYP142, putative cytoch 100.0 4.3E-58 1.5E-62  438.4  29.8  373   48-491    18-396 (398)
 47 1gwi_A CYP154C1, cytochrome P4 100.0 2.1E-59   7E-64  448.6  20.7  374   49-490    18-410 (411)
 48 1odo_A Putative cytochrome P45 100.0 7.3E-59 2.5E-63  445.0  24.1  373   49-488    16-407 (408)
 49 3abb_A CYP105D6, cytochrome P4 100.0 1.6E-59 5.4E-64  449.6  19.0  370   49-489    25-407 (408)
 50 2dkk_A Cytochrome P450; CYP158 100.0 2.8E-59 9.4E-64  447.0  19.9  370   49-490    28-411 (411)
 51 3dan_A Cytochrome P450 74A2; A 100.0 3.1E-57   1E-61  444.4  34.4  413   26-466     9-455 (473)
 52 2y5n_A MYCG, P-450-like protei 100.0 3.5E-58 1.2E-62  440.3  26.0  368   49-486    38-417 (417)
 53 2z3t_A Cytochrome P450; monoxy 100.0 1.9E-58 6.7E-63  443.5  24.1  373   50-491    22-418 (425)
 54 3ivy_A Cytochrome P450 CYP125; 100.0   8E-59 2.7E-63  447.7  19.9  394   27-491    19-430 (433)
 55 3buj_A CALO2; heme, iron, meta 100.0 1.9E-58 6.4E-63  440.8  22.2  367   50-489    15-396 (397)
 56 2xbk_A PIMD protein; epoxidati 100.0 7.9E-58 2.7E-62  435.6  26.4  361   50-486    28-404 (404)
 57 2wm5_A CYP124, putative cytoch 100.0 1.8E-57 6.3E-62  437.8  28.6  373   49-486    45-434 (435)
 58 3lxh_A Cytochrome P450; heme,  100.0 5.4E-58 1.8E-62  440.8  24.2  374   49-491    39-419 (421)
 59 3tkt_A Cytochrome P450; aromat 100.0 1.6E-57 5.6E-62  440.4  27.0  373   48-488    45-449 (450)
 60 3oft_A Cytochrome P450, CYP101 100.0 2.3E-57 7.9E-62  433.6  26.1  367   49-487    25-395 (396)
 61 2z36_A MOXA, cytochrome P450 t 100.0 1.2E-57 4.1E-62  436.4  22.7  369   49-487    23-408 (413)
 62 3mgx_A Putative P450 monooxyge 100.0 2.2E-57 7.4E-62  434.2  23.8  368   49-489    38-415 (415)
 63 3tyw_A Putative cytochrome P45 100.0 5.1E-57 1.8E-61  433.5  26.5  347   49-465    30-389 (417)
 64 1q5d_A P450 epoxidase; cytochr 100.0 9.4E-58 3.2E-62  438.6  20.7  371   49-491    27-418 (419)
 65 3r9b_A Cytochrome P450 164A2;  100.0 3.6E-57 1.2E-61  435.5  23.4  370   48-490    29-418 (418)
 66 3rwl_A Cytochrome P450 alkane  100.0 7.5E-56 2.6E-60  425.4  27.8  373   48-488    38-426 (426)
 67 1lfk_A OXYB, P450 monooxygenas 100.0 1.5E-56   5E-61  427.6  21.7  359   56-485    21-397 (398)
 68 3oo3_A OXY protein; cytochrome 100.0   8E-56 2.7E-60  421.2  25.7  363   48-486    12-384 (384)
 69 1n40_A P450 MT2, cytochrome P4 100.0 4.9E-57 1.7E-61  430.3  16.1  365   49-486    17-396 (396)
 70 3b4x_A 367AA long hypothetical 100.0 2.2E-55 7.4E-60  414.3  22.9  351   51-488     2-366 (367)
 71 1io7_A Cytochrome P450 CYP119; 100.0 2.9E-55 9.8E-60  414.1  22.7  353   51-490     2-368 (368)
 72 2wiy_A XPLA-heme, cytochrome P 100.0 5.1E-54 1.8E-58  408.9  29.1  367   49-486    21-393 (394)
 73 3p3o_A Cytochrome P450; monoox 100.0 2.6E-54 8.8E-59  414.0  19.8  367   49-488    34-415 (416)
 74 2rfb_A Cytochrome P450; heme,  100.0 1.1E-54 3.8E-59  406.0  16.6  320   59-466     2-325 (343)
 75 4dnj_A Putative cytochrome P45 100.0 9.3E-53 3.2E-57  402.1  26.4  384   31-488    17-411 (412)
 76 4dxy_A Cytochrome P450, CYP101 100.0 1.4E-48 4.8E-53  372.1  22.9  371   49-487    38-414 (417)
 77 2yjn_B Erycii, DTDP-4-keto-6-d 100.0 1.7E-47 5.9E-52  356.1  -1.1  333   27-485    35-380 (381)
 78 1m46_B IQ4, IQ4 motif from MYO  29.3      43  0.0015   15.9   1.9   12  312-323     8-19  (26)
 79 4fu3_A Regulation of nuclear P  23.1 1.6E+02  0.0054   21.8   5.5   71  274-356     2-72  (135)
 80 3lqv_A PRE-mRNA branch site pr  22.3      68  0.0023   22.9   3.2   60   27-91      3-65  (115)

No 1  
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A*
Probab=100.00  E-value=4.1e-76  Score=575.46  Aligned_cols=431  Identities=17%  Similarity=0.271  Sum_probs=350.4

Q ss_pred             cCCCCCc-ccchhhHHHHhhccchHHHHHHHHHHHhCCeeEEeeecccCcceEEEcChhhHHHhhhcCCccccCCccccc
Q 047974           27 INPTPWN-LPLLGMLASVILNINQLHDKVAQILEKTKGSFMIKGSWVAQYDMFLTSDPANVQHIMSTNFSKYHKGSEGRK  105 (497)
Q Consensus        27 ~ppgp~~-~P~~G~~~~~~~~~~~~~~~~~~~~~k~g~v~~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~~~~~~~~~  105 (497)
                      .||+|++ +|++||++++.++   ++.++.++++|||+||++   ++++.++|+|+||+++++++.++...+.+++.+..
T Consensus        12 ~PP~~~~~lP~iG~~~~~~~~---~~~~~~~~~~kYG~i~~~---~~~~~~~vvv~~~~~i~~il~~~~~~~~~~~~~~~   85 (461)
T 3ld6_A           12 SPPYIFSPIPFLGHAIAFGKS---PIEFLENAYEKYGPVFSF---TMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSR   85 (461)
T ss_dssp             CCCBCCCSSTTTBTHHHHHHC---HHHHHHHHHHHHCSEEEE---EETTEEEEEECSHHHHHHHHHCCTTTEESHHHHHH
T ss_pred             CCCCCCCCcCeeeeHHHhhhC---HHHHHHHHHHHhCCEEEE---EECCccEEEEeCHHHHHHHHhCCccccCCCcchhh
Confidence            5666654 9999999999766   788999999999999999   99999999999999999999887677877776655


Q ss_pred             cc-cccCCcCe-eecCCchHHHHHHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHHHHHHHHHH
Q 047974          106 RF-DIFGETGL-FNSDFDEWKHQRKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLLKRTTFDFA  183 (497)
Q Consensus       106 ~~-~~~g~~~l-~~~~~~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~v~  183 (497)
                      .. ..+|. ++ +..+++.|+++|+++.++|+...++++.+ .+++. .+.+.+.+.    ++..+|+.+.+..++++++
T Consensus        86 ~~~~~~g~-~~~~~~~~~~~~~~R~~~~~~f~~~~l~~~~~-~i~~~-~~~~~~~~~----~~~~~~~~~~~~~~~~~~i  158 (461)
T 3ld6_A           86 LTTPVFGK-GVAYDVPNPVFLEQKKMLKSGLNIAHFKQHVS-IIEKE-TKEYFESWG----ESGEKNVFEALSELIILTA  158 (461)
T ss_dssp             HHHHHHCT-TSGGGSCHHHHHHHHHHHHHHSSHHHHHHHHH-HHHHH-HHHHGGGGC----SEEEEEHHHHHHHHHHHHH
T ss_pred             hhhccCCC-ccccCCCcHHHHHHHHhccccccHHHHhhhhH-HHHHH-HHHHHHHHh----hcCCccHHHHHHHHHHHHH
Confidence            54 56777 55 45789999999999999999999988754 45444 333333332    3467899999999999999


Q ss_pred             HHhhcCCCCCCCCCCCCCCChHHHHHHHHHH----HH-H-HH----HHHHHHhHHHHHHHHHHHHHHHHHHHHHhccccc
Q 047974          184 CLIATGHNPNSLSVGFPEMGFPDAVDDACEA----IL-I-RH----LEKKLANGWRTIDQFWEKQKSMKQEEIEKGMEAK  253 (497)
Q Consensus       184 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~-~~----~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  253 (497)
                      +.++||.+++...    ...+.+.+..+...    .. . .+    ...+..++.+.+.+++.+.|++++...       
T Consensus       159 ~~~~fG~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~-------  227 (461)
T 3ld6_A          159 SHCLHGKEIRSQL----NEKVAQLYADLDGGFSHAAWLLPGWLPLPSFRRRDRAHREIKDIFYKAIQKRRQSQ-------  227 (461)
T ss_dssp             HHHHTCHHHHHTC----CHHHHHHHHHHHTTSSHHHHHSCTTSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCC-------
T ss_pred             HHHHcCcchhhhh----hhhhhhhhhhhhhhhhhHHHhhhhhccCcHHHHHHHHHHHHHHHHHHHHHHHHhcC-------
Confidence            9999998654321    11222222222111    00 0 00    144556777788888888887765321       


Q ss_pred             cccchhhHHHHHhcCCCCCCCCCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhhcccCCCCCC
Q 047974          254 EDEGIYSLLNCYLSGHEVTGPTPAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRNFSQEGFNKP  333 (497)
Q Consensus       254 ~~~~~~dll~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~  333 (497)
                        +..+|+++.+++...+++..++++++.++++.+++||+|||+.+++|++++|+.||++|+++++|++++++    ...
T Consensus       228 --~~~~d~l~~ll~~~~~~~~~ls~~ei~~~~~~~~~aG~dTt~~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~----~~~  301 (461)
T 3ld6_A          228 --EKIDDILQTLLDATYKDGRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCG----ENL  301 (461)
T ss_dssp             --CCCCSHHHHHHTCBCTTSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHC----TTC
T ss_pred             --CCCcchhhhhHHhhhcccCCCCHHHHHHHHHhhhhcccccccccchhhhcccccChHHHHHHHHHHHHHhc----ccc
Confidence              34578999999987777778999999999999999999999999999999999999999999999999996    344


Q ss_pred             CCCChhhhhcchhHHHHHHHhhcCCCCCCcccccccCCCcccCCeeeCCCcEEEEeccccccCCCCCCCCCCCCCCCCcc
Q 047974          334 PLVRLNELNKLVYLHAALCETLRLYPPVPFEIRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWGEDCREFKPERWI  413 (497)
Q Consensus       334 ~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl  413 (497)
                      ..++.+++++||||+|||+|+||++|+++...|++.+|+++ +||.|||||.|+++.+++|+||++| +||++|+||||+
T Consensus       302 ~~~~~~~l~~lpyl~avi~E~lRl~p~~~~~~r~~~~d~~~-~g~~ip~Gt~v~~~~~~~~~d~~~~-~dP~~F~PeRfl  379 (461)
T 3ld6_A          302 PPLTYDQLKDLNLLDRCIKETLRLRPPIMIMMRMARTPQTV-AGYTIPPGHQVCVSPTVNQRLKDSW-VERLDFNPDRYL  379 (461)
T ss_dssp             CCCCHHHHHTCHHHHHHHHHHHHHSCSCCCEEEEESSCEEE-TTEEECTTCEEEECHHHHTTCTTTC-TTTTSCCGGGGG
T ss_pred             cchhHHHHHHHhhhhheeeeccccCCchhccccccccceee-CCcccCCCCeeeechHhhcCCcccc-CCccccCccccC
Confidence            67899999999999999999999999999999999888776 9999999999999999999999999 999999999999


Q ss_pred             CCCCCccCCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCccceeeeeEEEeecCceEEEEEecCC
Q 047974          414 TEDGRIRHEPPHKFFSFNAGPRICIGKDIAFTLMKATAASIIHNYDVQVVKNHPVTYNLSIGFRMKHGLLARVSKRSA  491 (497)
Q Consensus       414 ~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  491 (497)
                      ++++...  .+..|+|||+|+|.|+|++||++|++++++.|+++|+|+++++.........+..+++++.|++++|+-
T Consensus       380 ~~~~~~~--~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~l~~~~~~~~~~~~~~~~p~~~~v~~~~Rss  455 (461)
T 3ld6_A          380 QDNPASG--EKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLIDGYFPTVNYTTMIHTPENPVIRYKRRST  455 (461)
T ss_dssp             SCCHHHH--SSSSSCTTCCGGGCCSCHHHHHHHHHHHHHHHHHHEEEECSTTCCCCBCCSSSSCCBSSCEEEEEECC-
T ss_pred             CCCcccC--CCCccccCCCcCcCChhHHHHHHHHHHHHHHHHHhCEEEeCCCCCCcccccceEEcCCceEEEEEECCC
Confidence            8754322  457899999999999999999999999999999999999988654434344445566789999999974


No 2  
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A*
Probab=100.00  E-value=1.7e-74  Score=568.59  Aligned_cols=434  Identities=22%  Similarity=0.341  Sum_probs=353.8

Q ss_pred             cCCCCCcccchhhHHHHhhc--cchHHHHHHHHHHHhCCeeEEeeecccCcceEEEcChhhHHHhhhcCCccccCCcccc
Q 047974           27 INPTPWNLPLLGMLASVILN--INQLHDKVAQILEKTKGSFMIKGSWVAQYDMFLTSDPANVQHIMSTNFSKYHKGSEGR  104 (497)
Q Consensus        27 ~ppgp~~~P~~G~~~~~~~~--~~~~~~~~~~~~~k~g~v~~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~~~~~~~~  104 (497)
                      .+|||+++|++||++++...  .++++.++.+++++||++|++   ++|+.++|+++||+++++|+.++ ..|.+++...
T Consensus        25 ~~PGP~~~p~iG~~~~~~~~~~~~~~~~~~~~l~~~YG~i~~~---~~g~~~~vvv~dp~~~~~il~~~-~~~~~r~~~~  100 (482)
T 3k9v_A           25 DLPGPTNWPLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQIFRM---KLGSFDSVHLGSPSLLEALYRTE-SAHPQRLEIK  100 (482)
T ss_dssp             GCCCSCCCTTTBTHHHHHHTTCGGGHHHHHHHHHHHHCSEEEE---EETTEEEEEECSHHHHHHHHHTC-CSSCCCCCCH
T ss_pred             CCCCCCCCCccccHHHHhccCCcccHHHHHHHHHHHcCCEEEE---ccCCCCEEEEcCHHHHHHHHHhc-CCCCCCCCch
Confidence            68899999999999998653  356889999999999999999   99999999999999999999875 6777765432


Q ss_pred             cc---cc--ccCCcCeeecCCchHHHHHHhhhccc-CHHHHHHHHHHHhHHHHHhhHHHHhhhhcC-CCceeeHHHHHHH
Q 047974          105 KR---FD--IFGETGLFNSDFDEWKHQRKLARAFI-NHQKFQQLMAKIVPEMIERGLIPVLDHVSE-EKMLVDFQDLLKR  177 (497)
Q Consensus       105 ~~---~~--~~g~~~l~~~~~~~w~~~R~~~~~~f-~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~vdl~~~~~~  177 (497)
                      ..   ..  ..|. +++..+|+.|+++||.+.+.| +.+.+..+. +.+.+. .+.+.+.+.+... .++++|+.+++..
T Consensus       101 ~~~~~~~~~~~~~-~l~~~~g~~w~~~Rr~~~~~f~~~~~~~~~~-~~i~~~-~~~l~~~l~~~~~~~g~~vd~~~~~~~  177 (482)
T 3k9v_A          101 PWKAYRDHRNEAY-GLMILEGQEWQRVRSAFQKKLMKPVEIMKLD-KKINEV-LADFLERMDELCDERGRIPDLYSELNK  177 (482)
T ss_dssp             HHHHHHHHHTCCC-CTTTCCHHHHHHHHHHHHHHHTCHHHHGGGH-HHHHHH-HHHHHHHHHHHCCTTSCCTTHHHHHHH
T ss_pred             HHHHHHHhcCCCC-CceeCCCchHHHHHHHhhHHhcChHHHHHHH-HHHHHH-HHHHHHHHHHHHhcCCCCCCHHHHHHH
Confidence            21   11  1345 888899999999999999986 677776654 445555 4666666665433 4568999999999


Q ss_pred             HHHHHHHHhhcCCCCCCCCCCC--CCCChHHHHHHHHHHH---------HHHHH----HHHHHhHHHHHHHHHHHHHHHH
Q 047974          178 TTFDFACLIATGHNPNSLSVGF--PEMGFPDAVDDACEAI---------LIRHL----EKKLANGWRTIDQFWEKQKSMK  242 (497)
Q Consensus       178 ~~~~v~~~~~fG~~~~~~~~~~--~~~~~~~~~~~~~~~~---------~~~~~----~~~~~~~~~~~~~~~~~~i~~~  242 (497)
                      +++++++.++||.+++..+...  ....+.+.+.......         +..++    .+...++.+.+.+++.+.++++
T Consensus       178 ~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~r  257 (482)
T 3k9v_A          178 WSFESICLVLYEKRFGLLQKETEEEALTFITAIKTMMSTFGKMMVTPVELHKRLNTKVWQAHTLAWDTIFKSVKPCIDNR  257 (482)
T ss_dssp             HHHHHHHHHHHSCCCCSSSTTSTTSSHHHHHHHHHHHTTGGGGSSSCHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcccccCCCCCCcchHHHHHHHHHHHHHHHHHHHHhhhHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999987665321  1223444444433211         11111    3445566677788888888887


Q ss_pred             HHHHHhccccccccchhhHHHHHhcCCCCCCCCCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHH
Q 047974          243 QEEIEKGMEAKEDEGIYSLLNCYLSGHEVTGPTPAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELK  322 (497)
Q Consensus       243 ~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~  322 (497)
                      ++....       ....|++..++...     .++++++.+++..+++||+|||+++++|++++|++||++|+|+++||+
T Consensus       258 ~~~~~~-------~~~~d~l~~ll~~~-----~l~~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~  325 (482)
T 3k9v_A          258 LQRYSQ-------QPGADFLCDIYQQD-----HLSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPQAQRRLLQEVQ  325 (482)
T ss_dssp             HHHTTT-------CTTSCHHHHHHHHT-----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred             HHHhcc-------CCchHHHHHHHhcc-----CCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence            754322       23467888887653     389999999999999999999999999999999999999999999999


Q ss_pred             hhcccCCCCCCCCCChhhhhcchhHHHHHHHhhcCCCCCCcccccccCCCcccCCeeeCCCcEEEEeccccccCCCCCCC
Q 047974          323 RNFSQEGFNKPPLVRLNELNKLVYLHAALCETLRLYPPVPFEIRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWGE  402 (497)
Q Consensus       323 ~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~  402 (497)
                      ++++     .+..++.+++.+||||+|||+|+||++|++|...|.+.+|.++ +||.|||||.|+++.+++||||++| +
T Consensus       326 ~v~~-----~~~~~~~~~l~~lpyl~avi~E~lRl~p~~~~~~r~~~~d~~~-~g~~ip~Gt~v~~~~~~~~~d~~~~-~  398 (482)
T 3k9v_A          326 SVLP-----DNQTPRAEDLRNMPYLKACLKESMRLTPSVPFTTRTLDKPTVL-GEYALPKGTVLTLNTQVLGSSEDNF-E  398 (482)
T ss_dssp             HHSC-----TTCCCCGGGGGGCHHHHHHHHHHHHHSCSCCEEEEECSSCEEE-TTEEECTTCEEEEECSGGGGCTTTC-S
T ss_pred             HHhC-----CCCCCCHHHHhhCHHHHHHHHHHhhcCCCCcCcccccCCceee-CCEEECCCCEEEEccccccCCCccC-C
Confidence            9994     4457899999999999999999999999999888888887666 9999999999999999999999999 9


Q ss_pred             CCCCCCCCCccCCCCCccCCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCccceeeeeEEEeecCce
Q 047974          403 DCREFKPERWITEDGRIRHEPPHKFFSFNAGPRICIGKDIAFTLMKATAASIIHNYDVQVVKNHPVTYNLSIGFRMKHGL  482 (497)
Q Consensus       403 ~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~  482 (497)
                      ||++|+||||++++++   ..+..|+|||+|+|.|+|++||++|++++++.|+++|++++.++.+......++..|+.++
T Consensus       399 ~p~~F~PeRfl~~~~~---~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~p~~~~  475 (482)
T 3k9v_A          399 DSHKFRPERWLQKEKK---INPFAHLPFGIGKRMCIGRRLAELQLHLALCWIIQKYDIVATDNEPVEMLHLGILVPSREL  475 (482)
T ss_dssp             STTSCCGGGGTCTTSC---CCGGGCCTTCCSTTSCSCHHHHHHHHHHHHHHHHHHEEEEESCCCCCCEEESSSEEESSSC
T ss_pred             CcCccCccccCCCCCC---CCCccccCCCCCCcCCccHHHHHHHHHHHHHHHHHhcEEeccCCCCcccccceeecCCCCc
Confidence            9999999999986542   3567899999999999999999999999999999999999987766666667788999999


Q ss_pred             EEEEEec
Q 047974          483 LARVSKR  489 (497)
Q Consensus       483 ~~~~~~r  489 (497)
                      +|++++|
T Consensus       476 ~~~~~~R  482 (482)
T 3k9v_A          476 PIAFRPR  482 (482)
T ss_dssp             CEEEEEC
T ss_pred             ceEEeeC
Confidence            9999997


No 3  
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Probab=100.00  E-value=2.8e-75  Score=573.75  Aligned_cols=440  Identities=16%  Similarity=0.215  Sum_probs=332.2

Q ss_pred             ccCCCCCcccchhhHHHHhhccchHHHHHHHHHHHhCCeeEEeeecccCcceEEEcChhhHHHhhhcCCccccCCccccc
Q 047974           26 KINPTPWNLPLLGMLASVILNINQLHDKVAQILEKTKGSFMIKGSWVAQYDMFLTSDPANVQHIMSTNFSKYHKGSEGRK  105 (497)
Q Consensus        26 ~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~k~g~v~~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~~~~~~~~~  105 (497)
                      |+||||++||++||++++...  +.+..+.++++|||+||++   ++|+.++|+|+||+++++|+.++...|..++....
T Consensus        10 kLPPGP~~lP~iGn~~~~~~~--~~~~~~~~~~~kYG~i~~~---~~g~~~~vvv~~p~~i~~vl~~~~~~f~~r~~~~~   84 (479)
T 3tbg_A           10 KLPPGPLPLPGLGNLLHVDFQ--NTPYCFDQLRRRFGDVFSL---QLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPI   84 (479)
T ss_dssp             CCCCCSCCBTTTBTGGGCCTT--SHHHHHHHHHHHHCSEEEE---EETTEEEEEEEHHHHHHHHHTTTGGGSCBCCCCGG
T ss_pred             CCCCCCCCcCcccchHhhcCC--CHHHHHHHHHHHhCCEEEE---EECCeeEEEECCHHHHHHHHHhCChhhcCCCchHH
Confidence            599999999999999887533  5788899999999999999   99999999999999999999887677766544322


Q ss_pred             cc----cccCCcCe-eecCCchHHHHHHhhhcccCHHHHHH-HHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHHHHHH
Q 047974          106 RF----DIFGETGL-FNSDFDEWKHQRKLARAFINHQKFQQ-LMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLLKRTT  179 (497)
Q Consensus       106 ~~----~~~g~~~l-~~~~~~~w~~~R~~~~~~f~~~~l~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~  179 (497)
                      ..    ...+. ++ +..+|+.|+++|+.+.+.|+...+.. .+...+... ...+...+..  ..+..+|+...+..++
T Consensus        85 ~~~~~~~~~~~-~~~~~~~g~~w~~~R~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~--~~~~~~~~~~~~~~~~  160 (479)
T 3tbg_A           85 TQILGFGPRSQ-GVFLARYGPAWREQRRFSVSTLRNLGLGKKSLEQWVTEE-AACLCAAFAN--HSGRPFRPNGLLDKAV  160 (479)
T ss_dssp             GGGGTCBTTBC-CSTTCCSSHHHHHHHHHHHHHHHHTTSTTCHHHHHHHHH-HHHHHHHHHT--TTTCCBCTHHHHHHHH
T ss_pred             HHHhccCCCCC-ceeeCCCCHHHHHHHHHHHHHhcchhhhHHHHHHHHHHH-HHHHHHHHHh--ccCCcccHHHHHHHHH
Confidence            21    22233 44 45669999999999999887665532 122223222 3444444443  3456799999999999


Q ss_pred             HHHHHHhhcCCCCCCCCCCCCCCChHHHHHHHHHH------HHH---------HHHHHHHHhHHHHHHHHHHHHHHHHHH
Q 047974          180 FDFACLIATGHNPNSLSVGFPEMGFPDAVDDACEA------ILI---------RHLEKKLANGWRTIDQFWEKQKSMKQE  244 (497)
Q Consensus       180 ~~v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~------~~~---------~~~~~~~~~~~~~~~~~~~~~i~~~~~  244 (497)
                      +++++.++||..++..+..  ...+.+........      ...         .....+.....+...+.+.+.++...+
T Consensus       161 ~~~~~~~~fg~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (479)
T 3tbg_A          161 SNVIASLTCGRRFEYDDPR--FLRLLDLAQEGLKEESGFLREVLNAVPVLLHIPALAGKVLRFQKAFLTQLDELLTEHRM  238 (479)
T ss_dssp             HHHHHHHHHSCCCCTTCHH--HHHHHHHHHHHHHTTSSHHHHHHHHSGGGGGSHHHHHHHTHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhhcCCcccccchh--hhhhhhhhhhhhhhhhhhhhhhhcccchhccchhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999988754321  01111111111100      000         000233444555556666666655554


Q ss_pred             HHHhccccccccchhhHHHHHh----cCCCCCCCCCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHH
Q 047974          245 EIEKGMEAKEDEGIYSLLNCYL----SGHEVTGPTPAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREE  320 (497)
Q Consensus       245 ~~~~~~~~~~~~~~~dll~~ll----~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~E  320 (497)
                      .....      ....|+++.+.    ....+.+..++++++.++++.+++||+|||+++++|++++|++||++|+||++|
T Consensus       239 ~~~~~------~~~~d~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~kl~~E  312 (479)
T 3tbg_A          239 TWDPA------QPPRDLTEAFLAEMEKAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQE  312 (479)
T ss_dssp             HCCTT------SCCCSHHHHHHHHHHHTTTCTTCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred             hhhcc------cccchhhhhhhhhhhhcccCCccchhhHHHHHHHHHHHHhhhhhhHHHHHHHHHHhccCHHHHHHHHHH
Confidence            33222      22233333332    333344567999999999999999999999999999999999999999999999


Q ss_pred             HHhhcccCCCCCCCCCChhhhhcchhHHHHHHHhhcCCCCCCcccccccCCCcccCCeeeCCCcEEEEeccccccCCCCC
Q 047974          321 LKRNFSQEGFNKPPLVRLNELNKLVYLHAALCETLRLYPPVPFEIRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVW  400 (497)
Q Consensus       321 i~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~  400 (497)
                      ++.++     +.+..++.+++.+||||+|||+||||++|++|...|+++.+++.++||.|||||.|+++.+++||||++|
T Consensus       313 i~~~~-----~~~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~~~~~~d~~~~g~~IP~Gt~V~~~~~~~h~d~~~~  387 (479)
T 3tbg_A          313 IDDVI-----GQVRRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVW  387 (479)
T ss_dssp             HHHHT-----CSSSCCCHHHHTTCHHHHHHHHHHHHHHCSSTTCCCEECSSCEEETTEEECTTCEEEEEHHHHHTCTTTS
T ss_pred             HHHHH-----hhccccchhhhccccccccceeeeccccccccccceeecCCCceECCEEecCCCeeeechhhhcCChhhC
Confidence            99998     4567789999999999999999999999999998887776566669999999999999999999999999


Q ss_pred             CCCCCCCCCCCccCCCCCccCCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCccc---eeeeeEEEe
Q 047974          401 GEDCREFKPERWITEDGRIRHEPPHKFFSFNAGPRICIGKDIAFTLMKATAASIIHNYDVQVVKNHPV---TYNLSIGFR  477 (497)
Q Consensus       401 g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~---~~~~~~~~~  477 (497)
                       +||++|+||||++++++..  .+..|+|||+|+|.|+|++||++|++++++.|+++|+|+++++.+.   ....+++..
T Consensus       388 -~dP~~F~PeRfl~~~~~~~--~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~  464 (479)
T 3tbg_A          388 -EKPFRFHPEHFLDAQGHFV--KPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVPTGQPRPSHHGVFAFLVS  464 (479)
T ss_dssp             -SSTTSCCGGGGBCTTCCBC--CCTTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHEEEECCTTSCCCCSCEEESSSEE
T ss_pred             -CCccccCccccCCCCcccC--CCCceecCCCCCcCChhHHHHHHHHHHHHHHHHHccEEEeCCCCCCccccccceeeec
Confidence             9999999999998765433  5678999999999999999999999999999999999999876432   233445666


Q ss_pred             ecCceEEEEEecCC
Q 047974          478 MKHGLLARVSKRSA  491 (497)
Q Consensus       478 ~~~~~~~~~~~r~~  491 (497)
                      | .+++|+++||+.
T Consensus       465 P-~~~~v~~~pRs~  477 (479)
T 3tbg_A          465 P-SPYELCAVPRHH  477 (479)
T ss_dssp             E-CCCCBEEEEC--
T ss_pred             C-CCeEEEEEECCC
Confidence            6 579999999985


No 4  
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A*
Probab=100.00  E-value=1.8e-74  Score=568.49  Aligned_cols=445  Identities=19%  Similarity=0.274  Sum_probs=341.1

Q ss_pred             hhccCCCCCcccchhhHHHHhhccchHHHHHHHHHHHhCCeeEEeeecccCcceEEEcChhhHHHhhhcC-CccccCCcc
Q 047974           24 FRKINPTPWNLPLLGMLASVILNINQLHDKVAQILEKTKGSFMIKGSWVAQYDMFLTSDPANVQHIMSTN-FSKYHKGSE  102 (497)
Q Consensus        24 ~~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~k~g~v~~~~~~~~~~~~~v~v~~p~~v~~il~~~-~~~~~~~~~  102 (497)
                      .++.||||+++|++||++++..+   ++.++.+++++||++|++   ++|+.++|+++||+++++|+.++ ...|..++.
T Consensus        12 k~~~~PGP~~~PliGn~~~~~~~---~~~~~~~~~~~yG~i~~~---~~g~~~~vvv~dp~~i~~il~~~~~~~f~~r~~   85 (485)
T 3nxu_A           12 KKLGIPGPTPLPFLGNILSYHKG---FCMFDMECHKKYGKVWGF---YDGQQPVLAITDPDMIKTVLVKECYSVFTNRRP   85 (485)
T ss_dssp             HHHTCCCCCCBTTTBTGGGGGGC---HHHHHHHHHHHHCSEEEE---EETTEEEEEECCHHHHHHHHTTTTTTTCCCCCC
T ss_pred             hhCCCCCCCCcCeecCcHHhhcC---hHHHHHHHHHHcCCeEEE---EeCCCCEEEECCHHHHHHHHhccchhhccCCcc
Confidence            35589999999999999988543   788899999999999999   89999999999999999999876 455665544


Q ss_pred             ccccccccCCcCeeecCCchHHHHHHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHHHHHHHHH
Q 047974          103 GRKRFDIFGETGLFNSDFDEWKHQRKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLLKRTTFDF  182 (497)
Q Consensus       103 ~~~~~~~~g~~~l~~~~~~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~v  182 (497)
                      +.. ....|. +++..+|+.|+++||+++++|+.++++.+. +.+++. .+.+.+.+.+....++++|+.+++..+++++
T Consensus        86 ~~~-~~~~~~-~l~~~~g~~w~~~R~~~~~~fs~~~l~~~~-~~i~~~-~~~l~~~l~~~~~~g~~~d~~~~~~~~~~dv  161 (485)
T 3nxu_A           86 FGP-VGFMKS-AISIAEDEEWKRLRSLLSPTFTSGKLKEMV-PIIAQY-GDVLVRNLRREAETGKPVTLKDVFGAYSMDV  161 (485)
T ss_dssp             CSC-CGGGGG-STTTCCHHHHHHHHHHHGGGGCHHHHHHHH-HHHHHH-HHHHHHHHHHHHHHTCCEEHHHHHHHHHHHH
T ss_pred             ccc-cccccc-CccccCCcHHHHHHhhcChhcCHHHHHHHH-HHHHHH-HHHHHHHHHHHhccCCcCcHHHHHHHHHHHH
Confidence            322 234555 888899999999999999999999999875 445555 5666666665444567899999999999999


Q ss_pred             HHHhhcCCCCCCCCCCCCCCChHHHHHHHH-------------HHHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHH
Q 047974          183 ACLIATGHNPNSLSVGFPEMGFPDAVDDAC-------------EAILIRHLEKKLA--NGWRTIDQFWEKQKSMKQEEIE  247 (497)
Q Consensus       183 ~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~~~~~~  247 (497)
                      ++.++||.+++..+...  ..+.+.+....             ..+++..+.....  ...+.+.+++.+.+++..+...
T Consensus       162 i~~~~fG~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (485)
T 3nxu_A          162 ITSTSFGVNIDSLNNPQ--DPFVENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRL  239 (485)
T ss_dssp             HHHHHHSCCCCGGGCTT--CHHHHHHTTSCCCCTTSHHHHHHHHCTTHHHHHHHTTCCSSCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHcCCccccccCCC--cHHHHHHHHHhchhhHHHHHHHHHHhhhhHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHH
Confidence            99999999987654321  12222221100             0000111111110  0112333344444444333222


Q ss_pred             hccccccccchhhHHHHHhcCCCC----CCCCCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHh
Q 047974          248 KGMEAKEDEGIYSLLNCYLSGHEV----TGPTPAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKR  323 (497)
Q Consensus       248 ~~~~~~~~~~~~dll~~ll~~~~~----~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~  323 (497)
                      ...    .....|+++.+++...+    .+..++++++.++++.+++||+|||+++++|++++|++||++|+++++|+++
T Consensus       240 ~~~----~~~~~d~l~~ll~~~~~~~~~~~~~l~~~ei~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~kl~~Ei~~  315 (485)
T 3nxu_A          240 EDT----QKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDA  315 (485)
T ss_dssp             HCC-------CCCHHHHHHHHHC--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred             hcc----CCCcccHHHHHHHhhhccccccccCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence            111    13456899998875321    2346899999999999999999999999999999999999999999999999


Q ss_pred             hcccCCCCCCCCCChhhhhcchhHHHHHHHhhcCCCCCCcccccccCCCcccCCeeeCCCcEEEEeccccccCCCCCCCC
Q 047974          324 NFSQEGFNKPPLVRLNELNKLVYLHAALCETLRLYPPVPFEIRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWGED  403 (497)
Q Consensus       324 ~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~  403 (497)
                      +++     .+..++.+++.+||||+|||+|+||++|+++...|.+.+|.++ +||.|||||.|+++.+++||||++| +|
T Consensus       316 ~~~-----~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~i-~g~~Ip~Gt~V~~~~~~~~~d~~~~-~d  388 (485)
T 3nxu_A          316 VLP-----NKAPPTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEI-NGMFIPKGVVVMIPSYALHRDPKYW-TE  388 (485)
T ss_dssp             HST-----TTCCCCHHHHHHCHHHHHHHHHHHHHSCSCSCEEEECCSCEEE-TTEEECTTCEEEECHHHHHTCTTTC-SS
T ss_pred             Hhc-----cCCCCCHHHHhcChHHHHHHHHHHhcCCCccCcceeeCCCeeE-CCEEECCCCEEEEchHHhcCChhhc-CC
Confidence            984     4457899999999999999999999999999877888777666 9999999999999999999999999 99


Q ss_pred             CCCCCCCCccCCCCCccCCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCc--cceeeeeEEEeecCc
Q 047974          404 CREFKPERWITEDGRIRHEPPHKFFSFNAGPRICIGKDIAFTLMKATAASIIHNYDVQVVKNH--PVTYNLSIGFRMKHG  481 (497)
Q Consensus       404 p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~--~~~~~~~~~~~~~~~  481 (497)
                      |++|+||||+++++..  ..+..|+|||+|+|.|+|++||++|++++++.|+++|++++.++.  +.....+.+..|+.+
T Consensus       389 p~~F~PeR~l~~~~~~--~~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~p~~~  466 (485)
T 3nxu_A          389 PEKFLPERFSKKNKDN--IDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIPLKLSLGGLLQPEKP  466 (485)
T ss_dssp             TTSCCGGGGSHHHHTT--SCTTTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHTTEEEECCTTCCSSCCBCSSSSCCBSSC
T ss_pred             ccCcCccccCCCcccc--CCCCCccCCCCCCcCCchHHHHHHHHHHHHHHHHHhcEEEeCCCCCCCcccCCCeeccCCCC
Confidence            9999999999754321  246789999999999999999999999999999999999998754  233344556788889


Q ss_pred             eEEEEEecCCCC
Q 047974          482 LLARVSKRSAQP  493 (497)
Q Consensus       482 ~~~~~~~r~~~~  493 (497)
                      ++|++++|+...
T Consensus       467 ~~~~~~~r~~~~  478 (485)
T 3nxu_A          467 VVLKVESRDGTV  478 (485)
T ss_dssp             CEEEEEEC----
T ss_pred             eEEEEEEccCCC
Confidence            999999998643


No 5  
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A*
Probab=100.00  E-value=4.1e-73  Score=561.50  Aligned_cols=433  Identities=19%  Similarity=0.293  Sum_probs=346.5

Q ss_pred             hhccCCCCCcccchhhHHHHhhcc-chHHHHHHHHHHHhCCeeEEeeecccCcceEEEcChhhHHHhhhcCCccccCCcc
Q 047974           24 FRKINPTPWNLPLLGMLASVILNI-NQLHDKVAQILEKTKGSFMIKGSWVAQYDMFLTSDPANVQHIMSTNFSKYHKGSE  102 (497)
Q Consensus        24 ~~~~ppgp~~~P~~G~~~~~~~~~-~~~~~~~~~~~~k~g~v~~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~~~~~~  102 (497)
                      .++.||||+++|++||++++.... ..++..+.+++++||++|++   ++|+.++|+++||+++++++++  ..|..++.
T Consensus        43 ~~~~pPGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~yG~v~~~---~~g~~~~vvv~~p~~~~~il~~--~~~~~r~~  117 (503)
T 3s79_A           43 GTSSIPGPGYCMGIGPLISHGRFLWMGIGSACNYYNRVYGEFMRV---WISGEETLIISKSSSMFHIMKH--NHYSSRFG  117 (503)
T ss_dssp             --CCCCSCCCCSSSHHHHHHHHHHHHCHHHHHHHHHHHSCSEEEE---ESSSSEEEEECCHHHHHHHHHS--GGGCCCCC
T ss_pred             ccCCCCCCCCCceeeehhccccccccchhHHHHHHHHHhCCeEEE---EeCCccEEEECCHHHHHHHHhc--CCCCCcch
Confidence            345899999999999999985432 24567888999999999999   9999999999999999999965  35655433


Q ss_pred             ccccc---cccCCcCe-eecCCchHHHHHHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHHHHH
Q 047974          103 GRKRF---DIFGETGL-FNSDFDEWKHQRKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLLKRT  178 (497)
Q Consensus       103 ~~~~~---~~~g~~~l-~~~~~~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~  178 (497)
                      .....   ...|. ++ +..+|+.|+++||++.++|+..+++++.+ .+.+. .+.+.+.+.+..+.++.+|+.+++..+
T Consensus       118 ~~~~~~~~~~~~~-~~~~~~~g~~w~~~Rr~~~~~f~~~~l~~~~~-~~~~~-~~~~l~~l~~~~~~~~~vdl~~~~~~~  194 (503)
T 3s79_A          118 SKLGLQCIGMHEK-GIIFNNNPELWKTTRPFFMKALSGPGLVRMVT-VCAES-LKTHLDRLEEVTNESGYVDVLTLLRRV  194 (503)
T ss_dssp             CHHHHHHHTCTTS-SSTTCCCHHHHHHHHHHHHHHTSTHHHHHHHH-HHHHH-HHHHHTTGGGTBCTTSCBCHHHHHHHH
T ss_pred             hhhhhhhhccCCC-ceeeCCCccHHHHHHHhhhHhhChHHHHHHHH-HHHHH-HHHHHHHHHHHhcCCCeEcHHHHHHHH
Confidence            22111   23345 55 45678999999999999999999988764 34444 344555555444456789999999999


Q ss_pred             HHHHHHHhhcCCCCCCCCCCCCCCChHHHHHHHHHHHH-----------HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Q 047974          179 TFDFACLIATGHNPNSLSVGFPEMGFPDAVDDACEAIL-----------IRHLEKKLANGWRTIDQFWEKQKSMKQEEIE  247 (497)
Q Consensus       179 ~~~v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  247 (497)
                      ++++++.++||.+++.       ..+.+.+........           ..++.++..++.+.+.+++.+.++++++..+
T Consensus       195 ~~~vi~~~~fG~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  267 (503)
T 3s79_A          195 MLDTSNTLFLRIPLDE-------SAIVVKIQGYFDAWQALLIKPDIFFKISWLYKKYEKSVKDLKDAIEVLIAEKRRRIS  267 (503)
T ss_dssp             HHHHHHHHHTCCCCCH-------HHHHHHHHHHHHHHHHHTTCCHHHHHSGGGTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCcccCc-------hhHHHHHHHHHHHHHHHhcCcHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            9999999999987741       112222222221110           1112356677888999999999999887765


Q ss_pred             hccccccccchhhHHHHHhcCCCCCCCCCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhhccc
Q 047974          248 KGMEAKEDEGIYSLLNCYLSGHEVTGPTPAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRNFSQ  327 (497)
Q Consensus       248 ~~~~~~~~~~~~dll~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~  327 (497)
                      .+...   ....|+++.+++..++  ..++++++.++++.+++||+|||+++++|++++|++||++|+|+++||+++++ 
T Consensus       268 ~~~~~---~~~~d~l~~ll~~~~~--~~l~~~~i~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~~~kl~~Ei~~v~~-  341 (503)
T 3s79_A          268 TEEKL---EECMDFATELILAEKR--GDLTRENVNQCILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIG-  341 (503)
T ss_dssp             TCTTT---TTTCCHHHHHHHHHHT--TSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTT-
T ss_pred             ccccc---chHHHHHHHHHHhccc--CCCCHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhC-
Confidence            43111   2335899999876432  35899999999999999999999999999999999999999999999999984 


Q ss_pred             CCCCCCCCCChhhhhcchhHHHHHHHhhcCCCCCCcccccccCCCcccCCeeeCCCcEEEEeccccccCCCCCCCCCCCC
Q 047974          328 EGFNKPPLVRLNELNKLVYLHAALCETLRLYPPVPFEIRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWGEDCREF  407 (497)
Q Consensus       328 ~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F  407 (497)
                           ++.++.+++++||||+|||+|+||++|+++...|++++|.++ +||.|||||.|+++.+++|+| ++| +||++|
T Consensus       342 -----~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~~r~~~~d~~~-~g~~ip~Gt~v~~~~~~~~~d-~~~-~dp~~F  413 (503)
T 3s79_A          342 -----ERDIKIDDIQKLKVMENFIYESMRYQPVVDLVMRKALEDDVI-DGYPVKKGTNIILNIGRMHRL-EFF-PKPNEF  413 (503)
T ss_dssp             -----TSCCCHHHHTTCHHHHHHHHHHHHHSCSSCCEEEECSSCEEE-TTEEECTTCEEEECHHHHTTT-SSC-SSTTSC
T ss_pred             -----CCCCCHHHHhcCHHHHHHHHhhhccCCCcccccccccCCeeE-CCEEECCCCEEEeehHHhCCC-ccC-CChhhC
Confidence                 457899999999999999999999999999988988888776 999999999999999999998 999 999999


Q ss_pred             CCCCccCCCCCccCCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCcc---ceeeeeEEEeecCc---
Q 047974          408 KPERWITEDGRIRHEPPHKFFSFNAGPRICIGKDIAFTLMKATAASIIHNYDVQVVKNHP---VTYNLSIGFRMKHG---  481 (497)
Q Consensus       408 ~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~---~~~~~~~~~~~~~~---  481 (497)
                      +||||++..      +...|+|||+|+|.|+|++||++|++++++.|+++|++++.++.+   .....+.+..|.++   
T Consensus       414 ~PeRf~~~~------~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~p~~~~~~  487 (503)
T 3s79_A          414 TLENFAKNV------PYRYFQPFGFGPRGCAGKYIAMVMMKAILVTLLRRFHVKTLQGQCVESIQKIHDLSLHPDETKNM  487 (503)
T ss_dssp             CGGGGSSCC------CTTTCCSSCCSTTSCTTHHHHHHHHHHHHHHHHTTEEEEESTTCCTTTSCEEESSSEEECTTSCC
T ss_pred             ChhhcCCCC------CcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHheEEEeCCCCCccccccccceeecCCCccce
Confidence            999999642      356799999999999999999999999999999999999987543   33445677787765   


Q ss_pred             eEEEEEecCC
Q 047974          482 LLARVSKRSA  491 (497)
Q Consensus       482 ~~~~~~~r~~  491 (497)
                      ++|+++||+.
T Consensus       488 ~~v~~~~R~~  497 (503)
T 3s79_A          488 LEMIFTPRNS  497 (503)
T ss_dssp             CCEEEEECC-
T ss_pred             eeEEeccCCc
Confidence            9999999975


No 6  
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A*
Probab=100.00  E-value=4.5e-73  Score=550.65  Aligned_cols=429  Identities=19%  Similarity=0.222  Sum_probs=344.8

Q ss_pred             hhccCCCCCcccchhhHHHHhhccchHHHHHHHHHHHhCCeeEEeeecccCcceEEEcChhhHHHhhhcCCccccCCccc
Q 047974           24 FRKINPTPWNLPLLGMLASVILNINQLHDKVAQILEKTKGSFMIKGSWVAQYDMFLTSDPANVQHIMSTNFSKYHKGSEG  103 (497)
Q Consensus        24 ~~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~k~g~v~~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~~~~~~~  103 (497)
                      ..+.||||+++|++||++++..+   ++ ++.+++++||++|++   +++|.+.++++||+.+++|+.++...|... ..
T Consensus        10 ~~~~pPgp~~~P~iG~~~~~~~~---~~-~~~~~~~~yg~v~~~---~~~g~~~vvv~~~~~~~~il~~~~~~~~~~-~~   81 (444)
T 2ve3_A           10 SLPIPPGDFGLPWLGETLNFLND---GD-FGKKRQQQFGPIFKT---RLFGKNVIFISGALANRFLFTKEQETFQAT-WP   81 (444)
T ss_dssp             CCCCCCCCCCBTTTBTHHHHHHC---TT-HHHHHHHHHCSSEEE---EETTEEEEEECSHHHHHHHTSSCTTTEEEE-CC
T ss_pred             CCCCCCCCCCCCccccHHHHhcC---cH-HHHHHHHHcCCeEEE---eeCCCCEEEEcCHHHHHHHHhCCCcccccc-hh
Confidence            34589999999999999998765   44 777899999999999   777888999999999999998764445421 11


Q ss_pred             cccccccCCcCeeecCCchHHHHHHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHHHHHHHHHH
Q 047974          104 RKRFDIFGETGLFNSDFDEWKHQRKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLLKRTTFDFA  183 (497)
Q Consensus       104 ~~~~~~~g~~~l~~~~~~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~v~  183 (497)
                      .....++|..+++..+|+.|+++|+++.++|++++++.+. +.+++. .+.+.+.+.    +++.+|+.+.+..++++++
T Consensus        82 ~~~~~~~g~~~l~~~~g~~~~~~R~~~~~~f~~~~l~~~~-~~i~~~-~~~l~~~l~----~~~~vd~~~~~~~~~~~vi  155 (444)
T 2ve3_A           82 LSTRILLGPNALATQMGEIHRSRRKILYQAFLPRTLDSYL-PKMDGI-VQGYLEQWG----KANEVIWYPQLRRMTFDVA  155 (444)
T ss_dssp             HHHHHHHCTTSGGGCCHHHHHHHHHHHHGGGCHHHHHTTH-HHHHHH-HHHHHHHHH----HSSEEEHHHHHHHHHHHHH
T ss_pred             HHHHHHhCccccccCCchHHHHHHHHHHhhcCHHHHHHHH-HHHHHH-HHHHHHHhc----CCCcEeHHHHHHHHHHHHH
Confidence            1111344544788889999999999999999999998875 445555 344444443    2468999999999999999


Q ss_pred             HHhhcCCCCCCCCCCCCCCChHHHHHHHHHHHHH-----H-HHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccccccccc
Q 047974          184 CLIATGHNPNSLSVGFPEMGFPDAVDDACEAILI-----R-HLEKKLANGWRTIDQFWEKQKSMKQEEIEKGMEAKEDEG  257 (497)
Q Consensus       184 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  257 (497)
                      +.++|| .....    . ..+.+.+..+......     . ....+..++.+.+.+++.+.|+++++.   +      ..
T Consensus       156 ~~~~fG-~~~~~----~-~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~r~~~---~------~~  220 (444)
T 2ve3_A          156 ATLFMG-EKVSQ----N-PQLFPWFETYIQGLFSLPIPLPNTLFGKSQRARALLLAELEKIIKARQQQ---P------PS  220 (444)
T ss_dssp             HHHHTC-HHHHS----C-TTHHHHHHHHHHHHSSCCCCSTTSHHHHHHHHHHHHHHHHHHHHHHHHTS---C------CC
T ss_pred             HHHHcC-CCccc----H-HHHHHHHHHHHHHHhcCCccCCCcHHHHHHHHHHHHHHHHHHHHHHHhcC---C------CC
Confidence            999999 32211    1 3455555443332110     0 013455667778888888888877643   1      24


Q ss_pred             hhhHHHHHhcCCCCCCCCCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhhcccCCCCCCCCCC
Q 047974          258 IYSLLNCYLSGHEVTGPTPAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRNFSQEGFNKPPLVR  337 (497)
Q Consensus       258 ~~dll~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~  337 (497)
                      ..|+++.+++..++++..++++++.++++.+++||+|||+++++|++++|++||++|++|++|++.+++     . ..++
T Consensus       221 ~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~-----~-~~~~  294 (444)
T 2ve3_A          221 EEDALGILLAARDDNNQPLSLPELKDQILLLLFAGHETLTSALSSFCLLLGQHSDIRERVRQEQNKLQL-----S-QELT  294 (444)
T ss_dssp             CSSHHHHHHHCBCTTSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHSSCC-----S-SCCC
T ss_pred             ccCHHHHHHhccccCCCCCCHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHCHHHHHHHHHHHHHhcc-----C-CCCC
Confidence            578999999876544566999999999999999999999999999999999999999999999999984     2 3689


Q ss_pred             hhhhhcchhHHHHHHHhhcCCCCCCcccccccCCCcccCCeeeCCCcEEEEeccccccCCCCCCCCCCCCCCCCccCCCC
Q 047974          338 LNELNKLVYLHAALCETLRLYPPVPFEIRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWGEDCREFKPERWITEDG  417 (497)
Q Consensus       338 ~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~  417 (497)
                      .+++.+||||+|||+|+||++|+++...|.+.+|.++ +||.|||||.|+++.+++||||++| +||++||||||++.+.
T Consensus       295 ~~~l~~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~l-~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~l~~~~  372 (444)
T 2ve3_A          295 AETLKKMPYLDQVLQEVLRLIPPVGGGFRELIQDCQF-QGFHFPKGWLVSYQISQTHADPDLY-PDPEKFDPERFTPDGS  372 (444)
T ss_dssp             HHHHTTCHHHHHHHHHHHHHSCSSCEEEEEESSCEEE-TTEEECTTCEEEEEHHHHTTCTTTS-SSTTSCCGGGSSTTST
T ss_pred             hhhhhcChHHHHHHHHHHhcCCCccCccceeCCCeeE-CCEEECCCCEEEechHHhcCChhhc-CCcCccCccccCCCCc
Confidence            9999999999999999999999999888888887666 9999999999999999999999999 9999999999997542


Q ss_pred             CccCCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCccceeeeeEEEeecCceEEEEEecC
Q 047974          418 RIRHEPPHKFFSFNAGPRICIGKDIAFTLMKATAASIIHNYDVQVVKNHPVTYNLSIGFRMKHGLLARVSKRS  490 (497)
Q Consensus       418 ~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  490 (497)
                      .. ...+..|+|||+|+|.|+|++||++|++++++.|+++|++++.++.+.......+..|.++++|++++|.
T Consensus       373 ~~-~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~r~  444 (444)
T 2ve3_A          373 AT-HNPPFAHVPFGGGLRECLGKEFARLEMKLFATRLIQQFDWTLLPGQNLELVVTPSPRPKDNLRVKLHSLM  444 (444)
T ss_dssp             TT-TSCTTSCCTTCCGGGCCSCHHHHHHHHHHHHHHHHHHEEEEECSSCCCCEEESSSEEETTCCEEEEEEC-
T ss_pred             cc-CCCCceeeCCCCCCccCccHHHHHHHHHHHHHHHHHhCEEEeCCCCCcceeccccccCCCCceEEEEeCC
Confidence            11 1245679999999999999999999999999999999999998765544555567788899999999983


No 7  
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Probab=100.00  E-value=8.8e-73  Score=555.36  Aligned_cols=439  Identities=16%  Similarity=0.247  Sum_probs=340.0

Q ss_pred             hccCCCCCcccchhhHHHHhhccchHHHHHHHHHHHhCCeeEEeeecccCcceEEEcChhhHHHhhhcCCccccCCcccc
Q 047974           25 RKINPTPWNLPLLGMLASVILNINQLHDKVAQILEKTKGSFMIKGSWVAQYDMFLTSDPANVQHIMSTNFSKYHKGSEGR  104 (497)
Q Consensus        25 ~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~k~g~v~~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~~~~~~~~  104 (497)
                      .++||||+++|++||++++.  ..+++.++.+++++||++|++   ++|+.++++++||+++++|+.++...|.+++...
T Consensus         9 ~~lpPgP~~~PliG~~~~~~--~~~~~~~~~~~~~~yG~v~~~---~~g~~~~vvv~~~~~v~~il~~~~~~f~~r~~~~   83 (476)
T 3e6i_A            9 GKLPPGPFPLPIIGNLFQLE--LKNIPKSFTRLAQRFGPVFTL---YVGSQRMVVMHGYKAVKEALLDYKDEFSGRGDLP   83 (476)
T ss_dssp             -CCCCCCCCBTTTBTGGGCC--TTCHHHHHHHHHHHHCSEEEE---EETTEEEEEECSHHHHHHHHHTSTTTTCEECCCG
T ss_pred             CCCCcCCCCcccccChhhhc--cccHhHHHHHHHHHhCCEEEE---EECCccEEEECCHHHHHHHHhcchHhhCCCCCCc
Confidence            45899999999999998873  235788999999999999999   9999999999999999999988766777766554


Q ss_pred             ccccccCCcCeeecCCchHHHHHHhhhcccCHHHHH-HHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHHHHHHHHHH
Q 047974          105 KRFDIFGETGLFNSDFDEWKHQRKLARAFINHQKFQ-QLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLLKRTTFDFA  183 (497)
Q Consensus       105 ~~~~~~g~~~l~~~~~~~w~~~R~~~~~~f~~~~l~-~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~v~  183 (497)
                      ....+.+. ++++++|+.|+++|+++.+.|+...+. ..+...+.+. .+.+.+.+.+  ..++++|+.+++..++++++
T Consensus        84 ~~~~~~~~-~l~~~~g~~w~~~Rr~~~~~l~~~~~~~~~~~~~i~~~-~~~l~~~l~~--~~~~~~d~~~~~~~~~~dvi  159 (476)
T 3e6i_A           84 AFHAHRDR-GIIFNNGPTWKDIRRFSLTTLRNYGMGKQGNESRIQRE-AHFLLEALRK--TQGQPFDPTFLIGCAPCNVI  159 (476)
T ss_dssp             GGGGGTTS-SSTTCCSTTHHHHHHHHHHHHHHTC-CCSHHHHHHHHH-HHHHHHHHHT--TTTSCBCTHHHHTHHHHHHH
T ss_pred             hhheecCC-CEEecCCcHHHHHHHHHHHHHHhcCCCchHHHHHHHHH-HHHHHHHHHH--hCCCCcChHHHHHHHHHHHH
Confidence            44455566 888899999999999888877653321 1122334444 4555555543  24568999999999999999


Q ss_pred             HHhhcCCCCCCCCCCCCCCChHHHHHHHHHHH-------------HHHHH---HHHHHhHHHHHHHHHHHHHHHHHHHHH
Q 047974          184 CLIATGHNPNSLSVGFPEMGFPDAVDDACEAI-------------LIRHL---EKKLANGWRTIDQFWEKQKSMKQEEIE  247 (497)
Q Consensus       184 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~---~~~~~~~~~~~~~~~~~~i~~~~~~~~  247 (497)
                      +.++||.+++..+..  ...+.+.+.......             +..++   .+...++.+.+.+++.+.++++++..+
T Consensus       160 ~~~~fG~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~lp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  237 (476)
T 3e6i_A          160 ADILFRKHFDYNDEK--FLRLMYLFNENFHLLSTPWLQLYNNFPSFLHYLPGSHRKVIKNVAEVKEYVSERVKEHHQSLD  237 (476)
T ss_dssp             HHHHHSCCCCTTCHH--HHHHHHHHHHHHHHTTSHHHHHHHHSHHHHTTSCSHHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred             HHHHcCCCCCCCCHH--HHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence            999999988643211  011222222221110             00111   345566777888888888887765432


Q ss_pred             hccccccccchhhHHHHHhcCCC----CCCCCCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHh
Q 047974          248 KGMEAKEDEGIYSLLNCYLSGHE----VTGPTPAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKR  323 (497)
Q Consensus       248 ~~~~~~~~~~~~dll~~ll~~~~----~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~  323 (497)
                      .       ....|+++.++....    ..+..++++++.++++.+++||+|||+++++|++++|++||++|+++++||++
T Consensus       238 ~-------~~~~d~~~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~Ei~~  310 (476)
T 3e6i_A          238 P-------NCPRDLTDCLLVEMEKEKHSAERLYTMDGITVTVADLFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDR  310 (476)
T ss_dssp             T-------TSCCSHHHHHHHHHHSSSSCSSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred             C-------CCCccHHHHHHHHHHhcccCCCCCcCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence            1       124578887776421    12345899999999999999999999999999999999999999999999999


Q ss_pred             hcccCCCCCCCCCChhhhhcchhHHHHHHHhhcCCCCCCc-ccccccCCCcccCCeeeCCCcEEEEeccccccCCCCCCC
Q 047974          324 NFSQEGFNKPPLVRLNELNKLVYLHAALCETLRLYPPVPF-EIRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWGE  402 (497)
Q Consensus       324 ~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~-~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~  402 (497)
                      +++     .+..++.+++.+||||+|||+|+||++|+++. ..|.+.+|.++ +||.|||||.|+++.+++||||++| +
T Consensus       311 ~~~-----~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~-~g~~ip~Gt~v~~~~~~~~~d~~~~-~  383 (476)
T 3e6i_A          311 VIG-----PSRIPAIKDRQEMPYMDAVVHEIQRFITLVPSNLPHEATRDTIF-RGYLIPKGTVVVPTLDSVLYDNQEF-P  383 (476)
T ss_dssp             HTT-----TTSCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEE-TTEEECTTCEEEECSHHHHTCTTTS-S
T ss_pred             hcC-----CCCCCChhhccCCchHHHHHHHHHHhccCCCccccccCCCCeeE-cCEEeCCCCEEEechHHhhCCcccC-C
Confidence            984     45678999999999999999999999999996 56777776555 9999999999999999999999999 9


Q ss_pred             CCCCCCCCCccCCCCCccCCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeec-Cccce--e-eeeEEEee
Q 047974          403 DCREFKPERWITEDGRIRHEPPHKFFSFNAGPRICIGKDIAFTLMKATAASIIHNYDVQVVK-NHPVT--Y-NLSIGFRM  478 (497)
Q Consensus       403 ~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~-~~~~~--~-~~~~~~~~  478 (497)
                      ||++|+||||+++++...  ....|+|||+|+|.|+|++||++|++++++.|+++|++++.. +.+..  . ..+.+.. 
T Consensus       384 ~p~~F~PeR~l~~~~~~~--~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~-  460 (476)
T 3e6i_A          384 DPEKFKPEHFLNENGKFK--YSDYFKPFSTGKRVCAGEGLARMELFLLLCAILQHFNLKPLVDPKDIDLSPIHIGFGCI-  460 (476)
T ss_dssp             STTSCCGGGGBCTTSSBC--CCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEEESSCTTTCCCSCSEESSSEE-
T ss_pred             CccccCchhhcCCCCCcc--CccceecCCCCCccCccHHHHHHHHHHHHHHHHHhcEeecCCCCCCCCCCcccCccccC-
Confidence            999999999998754432  467899999999999999999999999999999999999853 22222  2 2334444 


Q ss_pred             cCceEEEEEecCC
Q 047974          479 KHGLLARVSKRSA  491 (497)
Q Consensus       479 ~~~~~~~~~~r~~  491 (497)
                      +.+++|+++||+.
T Consensus       461 p~~~~~~~~~R~~  473 (476)
T 3e6i_A          461 PPRYKLCVIPRSH  473 (476)
T ss_dssp             CCCCCEEEEECC-
T ss_pred             CCCeEEEEEeccc
Confidence            4679999999986


No 8  
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A*
Probab=100.00  E-value=1.5e-71  Score=547.99  Aligned_cols=443  Identities=18%  Similarity=0.205  Sum_probs=348.0

Q ss_pred             cCCCCCcccchhhHHHHhhc--cchHHHHHHHHHHHhCCeeEEeeecccCcceEEEcChhhHHHhhhcCCccccCCcccc
Q 047974           27 INPTPWNLPLLGMLASVILN--INQLHDKVAQILEKTKGSFMIKGSWVAQYDMFLTSDPANVQHIMSTNFSKYHKGSEGR  104 (497)
Q Consensus        27 ~ppgp~~~P~~G~~~~~~~~--~~~~~~~~~~~~~k~g~v~~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~~~~~~~~  104 (497)
                      .+|||+++|+. +++.+...  .+.++.++.++++|||+||++   ++|+.+.|+++||+++++|+.++ ..|++++...
T Consensus        10 ~~PGP~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~kYG~i~~~---~~g~~~~vvv~dp~~~~~il~~~-~~f~~r~~~~   84 (487)
T 3n9y_A           10 EIPSPGDNGWL-NLYHFWRETGTHKVHLHHVQNFQKYGPIYRE---KLGNVESVYVIDPEDVALLFKSE-GPNPERFLIP   84 (487)
T ss_dssp             GSCCSCSCHHH-HHHHHHHHTCGGGHHHHHHHHHHHHCSEEEE---EETTEEEEEECCHHHHHHHHHTC-CSSCCCCCCH
T ss_pred             hCCCCCCCChh-hHHHHHhcCCCcchhHHHHHHHHHcCceeec---cCCCCCEEEEcCHHHHHHHHHhC-CCCCCCCCCc
Confidence            58899988876 77777543  356889999999999999999   89999999999999999999876 4676665432


Q ss_pred             cc-----ccccCCcCeeecCCchHHHHHHhhhcc-cCHHHHHHHHHHHhHHHHHhhHHHHhhhh----cCCCceeeHHHH
Q 047974          105 KR-----FDIFGETGLFNSDFDEWKHQRKLARAF-INHQKFQQLMAKIVPEMIERGLIPVLDHV----SEEKMLVDFQDL  174 (497)
Q Consensus       105 ~~-----~~~~g~~~l~~~~~~~w~~~R~~~~~~-f~~~~l~~~~~~~~~~~~~~~l~~~l~~~----~~~~~~vdl~~~  174 (497)
                      ..     ....+. +++..+|+.|+++||++.+. |+.+.++.+. +.+++. .+.+.+.+.+.    .+++.++|+.++
T Consensus        85 ~~~~~~~~~~~~~-~l~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~-~~i~~~-~~~l~~~l~~~~~~~~~~~~~vd~~~~  161 (487)
T 3n9y_A           85 PWVAYHQYYQRPI-GVLLKKSAAWKKDRVALNQEVMAPEATKNFL-PLLDAV-SRDFVSVLHRRIKKAGSGNYSGDISDD  161 (487)
T ss_dssp             HHHHHHHHTTCCC-CGGGCCHHHHHHHHHHHHHHHTSHHHHTTHH-HHHHHH-HHHHHHHHHHHHHHHTSSSEEECCHHH
T ss_pred             HHHHHHHHccccC-CCccCCcHHHHHHHHhcCcccCCchHHHHhh-hHHHHH-HHHHHHHHHHHhcccccCCCCccHHHH
Confidence            21     112344 88889999999999999995 9999998875 445555 45555555442    133568999999


Q ss_pred             HHHHHHHHHHHhhcCCCCCCCCCCCCC--CChHHHHHHHHHHH---------HHHHH----HHHHHhHHHHHHHHHHHHH
Q 047974          175 LKRTTFDFACLIATGHNPNSLSVGFPE--MGFPDAVDDACEAI---------LIRHL----EKKLANGWRTIDQFWEKQK  239 (497)
Q Consensus       175 ~~~~~~~v~~~~~fG~~~~~~~~~~~~--~~~~~~~~~~~~~~---------~~~~~----~~~~~~~~~~~~~~~~~~i  239 (497)
                      +..+++++++.++||.+++..+.....  ..+.+.+.......         +.+++    .+...+..+.+.++..+.+
T Consensus       162 ~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i  241 (487)
T 3n9y_A          162 LFRFAFESITNVIFGERQGMLEEVVNPEAQRFIDAIYQMFHTSVPMLNLPPDLFRLFRTKTWKDHVAAWDVIFSKADIYT  241 (487)
T ss_dssp             HHHHHHHHHHHHHHSSCCCTTSSSCCHHHHHHHHHHHHHHHHHGGGTTSCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcccccccCCCCChHHHHHHHHHHHHHHHHHHHHhcCHHHHhhcccHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999998876543211  12333333332221         11111    2334445566677777888


Q ss_pred             HHHHHHHHhccccccccchhhHHHHHhcCCCCCCCCCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHH
Q 047974          240 SMKQEEIEKGMEAKEDEGIYSLLNCYLSGHEVTGPTPAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIRE  319 (497)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~  319 (497)
                      +++.+....+...  .....|+++.+++..     .++++++.+++..+++||+|||+++++|++++|+.||++|+|+++
T Consensus       242 ~~~~~~~~~~~~~--~~~~~d~l~~ll~~~-----~l~~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~  314 (487)
T 3n9y_A          242 QNFYWELRQKGSV--HHDYRGILYRLLGDS-----KMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRA  314 (487)
T ss_dssp             HHHHHHHHHHCCC--CSSCCCHHHHHHHSC-----SSCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred             HHHHHHHHhcCCc--ccchHHHHHHHHhcC-----CCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhChHHHHHHHH
Confidence            7776654432111  123478999999753     389999999999999999999999999999999999999999999


Q ss_pred             HHHhhcccCCCCCCCCCChhhhhcchhHHHHHHHhhcCCCCCCcccccccCCCcccCCeeeCCCcEEEEeccccccCCCC
Q 047974          320 ELKRNFSQEGFNKPPLVRLNELNKLVYLHAALCETLRLYPPVPFEIRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSV  399 (497)
Q Consensus       320 Ei~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~  399 (497)
                      |++++++.     +..++.+++.+||||+|||+|+||++|+++...|.+.+|.++ +||.|||||.|+++.+++||||++
T Consensus       315 Ei~~~~~~-----~~~~~~~~l~~lpyl~avi~E~lRl~p~~~~~~R~~~~d~~~-~g~~ip~Gt~v~~~~~~~~~d~~~  388 (487)
T 3n9y_A          315 EVLAARHQ-----AQGDMATMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVL-RDYMIPAKTLVQVAIYALGREPTF  388 (487)
T ss_dssp             HHHHHHHH-----TTTCHHHHTTSCHHHHHHHHHHHHHSCSSSEEEEECSSCEEE-TTEEECTTCEEEEEHHHHHTCTTT
T ss_pred             HHHHhhcc-----cccchhhhhhhCHHHHHHHHHHhhhCCcccccceeecCceee-CCEEECCCCEEEeCcHHhcCCccc
Confidence            99999853     234568999999999999999999999999877888887666 999999999999999999999999


Q ss_pred             CCCCCCCCCCCCccCCCCCccCCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCccceeeeeEEEeec
Q 047974          400 WGEDCREFKPERWITEDGRIRHEPPHKFFSFNAGPRICIGKDIAFTLMKATAASIIHNYDVQVVKNHPVTYNLSIGFRMK  479 (497)
Q Consensus       400 ~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~  479 (497)
                      | +||++|+||||++.++.   .....|+|||+|+|.|+|++||++|++++++.|+++|++++.++.+.......+..|+
T Consensus       389 ~-~dp~~F~PeR~l~~~~~---~~~~~~~pFg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~p~  464 (487)
T 3n9y_A          389 F-FDPENFDPTRWLSKDKN---ITYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFRVEIQHLSDVGTTFNLILMPE  464 (487)
T ss_dssp             S-SSTTSCCGGGGTCSCTT---SSTTTCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEECTTCCCCCEEESSSEEES
T ss_pred             C-CCcccCChhhcCCCCCC---CCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCEEEecCCcccccceeeeecCC
Confidence            9 99999999999985432   2467899999999999999999999999999999999999987766666667788999


Q ss_pred             CceEEEEEecCCCCC
Q 047974          480 HGLLARVSKRSAQPR  494 (497)
Q Consensus       480 ~~~~~~~~~r~~~~~  494 (497)
                      ++++|++++|++++.
T Consensus       465 ~~~~~~~~~r~~~~~  479 (487)
T 3n9y_A          465 KPISFTFWPFNQEAT  479 (487)
T ss_dssp             SCCCEEEEEC-----
T ss_pred             CCceeEEEECCcchh
Confidence            999999999986543


No 9  
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A*
Probab=100.00  E-value=2.7e-72  Score=550.83  Aligned_cols=435  Identities=19%  Similarity=0.279  Sum_probs=338.8

Q ss_pred             hccCCCCCcccchhhHHHHhhccchHHHHHHHHHHHhCCeeEEeeecccCcceEEEcChhhHHHhhhcCCccccCCcccc
Q 047974           25 RKINPTPWNLPLLGMLASVILNINQLHDKVAQILEKTKGSFMIKGSWVAQYDMFLTSDPANVQHIMSTNFSKYHKGSEGR  104 (497)
Q Consensus        25 ~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~k~g~v~~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~~~~~~~~  104 (497)
                      .+.||||+++|++||++++.  .++++.++.+++++||++|++   ++|+.+.++++||+.+++|+.++...|.+++...
T Consensus         9 ~~~pPgP~~~p~iG~~~~~~--~~~~~~~~~~l~~~yG~v~~~---~~g~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~   83 (476)
T 1po5_A            9 GKLPPGPSPLPVLGNLLQMD--RKGLLRSFLRLREKYGDVFTV---YLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIA   83 (476)
T ss_dssp             CCCCCCSCCBTTTBTGGGCC--TTCHHHHHHHHHHHHCSEEEE---EETTEEEEEECSHHHHHHHHTTTTTTTCEECCGG
T ss_pred             CCCCcCCCCCCccccHHhcc--CCcHHHHHHHHHHHhCCEEEE---EECCccEEEECCHHHHHHHHHhCcHhhCCCCCcH
Confidence            35899999999999998872  245788999999999999999   8888899999999999999976556777654332


Q ss_pred             ccccc-cCCcCeeecCCchHHHHHHhhhcccCHH--HHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHHHHHHHH
Q 047974          105 KRFDI-FGETGLFNSDFDEWKHQRKLARAFINHQ--KFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLLKRTTFD  181 (497)
Q Consensus       105 ~~~~~-~g~~~l~~~~~~~w~~~R~~~~~~f~~~--~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~  181 (497)
                      ..... .|. ++++++|+.|+++||++.+.|+..  .++.+ .+.+.+. .+.+.+.+.+  ..++++|+.+.+..++++
T Consensus        84 ~~~~~~~~~-~l~~~~g~~w~~~Rr~~~~~f~~~~~~~~~~-~~~i~~~-~~~l~~~l~~--~~~~~~d~~~~~~~~~~~  158 (476)
T 1po5_A           84 VVDPIFQGY-GVIFANGERWRALRRFSLATMRDFGMGKRSV-EERIQEE-ARCLVEELRK--SKGALLDNTLLFHSITSN  158 (476)
T ss_dssp             GGCSCCSSC-CCCCSSHHHHHHHHHHHHHHHHHSCCCHHHH-HHHHHHH-HHHHHHHHHH--TTTCCBCCHHHHHHHHHH
T ss_pred             HHHhhcCCC-ceEecCCcHHHHHHHHHHHHHHHhCCChhHH-HHHHHHH-HHHHHHHHHh--cCCCccCHHHHHHHHHHH
Confidence            22222 345 888889999999999999998776  34444 3445555 4555555543  234679999999999999


Q ss_pred             HHHHhhcCCCCCCCCCCCCCCChHHHHHHHHHHH------------HHHH----H---HHHHHhHHHHHHHHHHHHHHHH
Q 047974          182 FACLIATGHNPNSLSVGFPEMGFPDAVDDACEAI------------LIRH----L---EKKLANGWRTIDQFWEKQKSMK  242 (497)
Q Consensus       182 v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~----~---~~~~~~~~~~~~~~~~~~i~~~  242 (497)
                      +++.++||.+++..+     ..+.+....+....            ..++    +   .++..++.+.+.+++.+.|+++
T Consensus       159 vi~~~~fG~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~lp~~~~~~~~~~~~~~~~~~~~i~~r  233 (476)
T 1po5_A          159 IICSIVFGKRFDYKD-----PVFLRLLDLFFQSFSLISSFSSQVFELFSGFLKHFPGTHRQIYRNLQEINTFIGQSVEKH  233 (476)
T ss_dssp             HHHHHHHSSCCCTTC-----HHHHHHHHHHHHHTTTCCTTHHHHHHHTHHHHHTSSCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCCCCCCC-----HHHHHHHHHHHHHHhhhcchhhHHHHhhhHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999876322     12222221111100            1111    1   2345667778888888888887


Q ss_pred             HHHHHhccccccccchhhHHHHHhcCC----CCCCCCCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHH
Q 047974          243 QEEIEKGMEAKEDEGIYSLLNCYLSGH----EVTGPTPAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIR  318 (497)
Q Consensus       243 ~~~~~~~~~~~~~~~~~dll~~ll~~~----~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~  318 (497)
                      ++..+.       ....|+++.++...    .+.+..++++++.+++..+++||+|||+++++|++++|++||++|++|+
T Consensus       234 ~~~~~~-------~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~  306 (476)
T 1po5_A          234 RATLDP-------SNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQ  306 (476)
T ss_dssp             HTTCCT-------TSCCSHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred             HHhcCC-------CCcccHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHHhCHHHHHHHH
Confidence            653211       12468888887532    1123458999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcccCCCCCCCCCChhhhhcchhHHHHHHHhhcCCCCCCc-ccccccCCCcccCCeeeCCCcEEEEeccccccCC
Q 047974          319 EELKRNFSQEGFNKPPLVRLNELNKLVYLHAALCETLRLYPPVPF-EIRIPLQPDVLPSGHQVNQNTHVLISAYSMARMT  397 (497)
Q Consensus       319 ~Ei~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~-~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~  397 (497)
                      +||+++++     .+..++.+++.+||||+|||+|+||++|+++. ..|.+.+|.++ +||.|||||.|+++.+++||||
T Consensus       307 ~Ei~~~~~-----~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~-~g~~Ip~Gt~v~~~~~~~~rdp  380 (476)
T 1po5_A          307 KEIEQVIG-----SHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQF-RGYVIPKNTEVFPVLSSALHDP  380 (476)
T ss_dssp             HHHHHHTC-----SSSCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCCCEECSSCEEE-TTEEECTTCEEEECHHHHHTCT
T ss_pred             HHHHHHhC-----CCCCCChHHHhcCcHHHHHHHHHHHhccCCCCCCccccCCCcee-cCEecCCCCEEEeehHhHhcCc
Confidence            99999984     34568999999999999999999999999995 67888777666 9999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCccCCCCCccCCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCcc---cee-eee
Q 047974          398 SVWGEDCREFKPERWITEDGRIRHEPPHKFFSFNAGPRICIGKDIAFTLMKATAASIIHNYDVQVVKNHP---VTY-NLS  473 (497)
Q Consensus       398 ~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~---~~~-~~~  473 (497)
                      ++| +||++|+||||+++++...  .+..|+|||+|+|.|+|++||++|++++++.|+++|++++.++.+   ... ..+
T Consensus       381 ~~~-~dp~~F~PeR~l~~~~~~~--~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~  457 (476)
T 1po5_A          381 RYF-ETPNTFNPGHFLDANGALK--RNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASPVPPEDIDLTPRESG  457 (476)
T ss_dssp             TTC-SSTTSCCGGGGBCTTSCBC--CCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEECSSCGGGCCCCCCSTT
T ss_pred             ccc-CCccccCchhhCCCCCCcc--CCccccCCCCccccCcchHHHHHHHHHHHHHHHhceEEeCCCCCCCCCccCCcCc
Confidence            999 9999999999997654322  356899999999999999999999999999999999999987542   122 345


Q ss_pred             EEEeecCceEEEEEecCC
Q 047974          474 IGFRMKHGLLARVSKRSA  491 (497)
Q Consensus       474 ~~~~~~~~~~~~~~~r~~  491 (497)
                      .+..| .+++|++++|+.
T Consensus       458 ~~~~p-~~~~v~~~~R~~  474 (476)
T 1po5_A          458 VGNVP-PSYQIRFLARHH  474 (476)
T ss_dssp             SSCCC-CCCCBEEEECC-
T ss_pred             eeecC-cceEEEEEecCC
Confidence            55666 689999999965


No 10 
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A*
Probab=100.00  E-value=1.9e-72  Score=551.81  Aligned_cols=437  Identities=17%  Similarity=0.226  Sum_probs=340.2

Q ss_pred             ccCCCCCcccchhhHHHHhhccchHHHHHHHHHHHhCCeeEEeeecccCcceEEEcChhhHHHhhhcCCccccCCccccc
Q 047974           26 KINPTPWNLPLLGMLASVILNINQLHDKVAQILEKTKGSFMIKGSWVAQYDMFLTSDPANVQHIMSTNFSKYHKGSEGRK  105 (497)
Q Consensus        26 ~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~k~g~v~~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~~~~~~~~~  105 (497)
                      ++||||+++|++||++++.  .++++.++.+++++||++|++   ++++.+.++++||+.+++|+.++...|.+++....
T Consensus        10 ~~pPgP~~~p~iG~~~~~~--~~~~~~~~~~l~~~yG~v~~~---~~~~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~   84 (476)
T 2fdv_A           10 KLPPGPTPLPFIGNYLQLN--TEQMYNSLMKISERYGPVFTI---HLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQAT   84 (476)
T ss_dssp             BCCCCCCCBTTTBTGGGCC--TTBHHHHHHHHHHHHCSEEEE---EETTEEEEEECSHHHHHHHHTTTTTTTCEECCCHH
T ss_pred             CCCCCCCCCcccccHhhcC--CcchHHHHHHHHHHhCCEEEE---EECCccEEEECCHHHHHHHHhcChHhhCCCCCcHH
Confidence            5799999999999998772  235788999999999999999   88889999999999999999765566765443321


Q ss_pred             ccc-ccCCcCeeecCCchHHHHHHhhhcccCHHHH--HHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHHHHHHHHH
Q 047974          106 RFD-IFGETGLFNSDFDEWKHQRKLARAFINHQKF--QQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLLKRTTFDF  182 (497)
Q Consensus       106 ~~~-~~g~~~l~~~~~~~w~~~R~~~~~~f~~~~l--~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~v  182 (497)
                      ... ..|. +++.++|+.|+++|+++.++|+...+  +.+ .+.+.+. .+.+.+.+.+  ..++++|+.+++..+++++
T Consensus        85 ~~~~~~~~-~l~~~~g~~~~~~Rr~~~~~f~~~~~~~~~~-~~~i~~~-~~~l~~~l~~--~~~~~vd~~~~~~~~~~~v  159 (476)
T 2fdv_A           85 FDWVFKGY-GVVFSNGERAKQLRRFSIATLRDFGVGKRGI-EERIQEE-AGFLIDALRG--TGGANIDPTFFLSRTVSNV  159 (476)
T ss_dssp             HHHHHTTC-SSSSCCHHHHHHHHHHHHHHHHHTTTTSHHH-HHHHHHH-HHHHHHHHHH--TTTCCBCCHHHHHHHHHHH
T ss_pred             HhhhcCCC-CeEecCchHHHHHHHHHHHHHHHhCCChhhH-HHHHHHH-HHHHHHHHHh--cCCCccChHHHHHHHHHHH
Confidence            111 2255 88888999999999999999987655  444 3445555 4555555543  2346799999999999999


Q ss_pred             HHHhhcCCCCCCCCCCCCCCChHHHHHHHHHHH---------HHHH----H---HHHHHhHHHHHHHHHHHHHHHHHHHH
Q 047974          183 ACLIATGHNPNSLSVGFPEMGFPDAVDDACEAI---------LIRH----L---EKKLANGWRTIDQFWEKQKSMKQEEI  246 (497)
Q Consensus       183 ~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~----~---~~~~~~~~~~~~~~~~~~i~~~~~~~  246 (497)
                      ++.++||.+++..+.  ....+.+.+.......         ..++    +   .++..++.+.+.+++.+.|+++++..
T Consensus       160 i~~~~fG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~i~~r~~~~  237 (476)
T 2fdv_A          160 ISSIVFGDRFDYKDK--EFLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKVEHNQRTL  237 (476)
T ss_dssp             HHHHHHSSCCCTTCH--HHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHTTSCSHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHcCCcCCCCCH--HHHHHHHHHHHHHHhhcccccchhhhhhhHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            999999998763221  1112222222222110         1111    1   23455667778888888888776432


Q ss_pred             HhccccccccchhhHHHHHhcCCC----CCCCCCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHH
Q 047974          247 EKGMEAKEDEGIYSLLNCYLSGHE----VTGPTPAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELK  322 (497)
Q Consensus       247 ~~~~~~~~~~~~~dll~~ll~~~~----~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~  322 (497)
                      +.       ....|+++.++....    .++..++++++.++++.+++||+|||+++++|++++|++||++|++|++||+
T Consensus       238 ~~-------~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~Ei~  310 (476)
T 2fdv_A          238 DP-------NSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEID  310 (476)
T ss_dssp             CT-------TSCCSHHHHHHHHHHHTTTCTTCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred             CC-------CCCccHHHHHHHHHHhcccCccccccHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence            11       234689998886521    1235689999999999999999999999999999999999999999999999


Q ss_pred             hhcccCCCCCCCCCChhhhhcchhHHHHHHHhhcCCCCCC-cccccccCCCcccCCeeeCCCcEEEEeccccccCCCCCC
Q 047974          323 RNFSQEGFNKPPLVRLNELNKLVYLHAALCETLRLYPPVP-FEIRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWG  401 (497)
Q Consensus       323 ~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~-~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g  401 (497)
                      ++++     .+..++.+++.+||||+|||+|+||++|+++ ...|.+.+|.++ +||.|||||.|+++.+++||||++| 
T Consensus       311 ~~~~-----~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~-~g~~Ip~Gt~V~~~~~~~~rd~~~~-  383 (476)
T 2fdv_A          311 RVIG-----KNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKF-RDFFLPKGTEVYPMLGSVLRDPSFF-  383 (476)
T ss_dssp             HHTC-----SSSCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEE-TTEEECTTCEEEECHHHHHTCTTTC-
T ss_pred             Hhhc-----CCCCCChhhhhcChHHHHHHHHHHHhcCCcccCcceeccCCeeE-CCEeeCCCCEEEeehHHhhCChhhc-
Confidence            9984     3456899999999999999999999999999 567888877555 9999999999999999999999999 


Q ss_pred             CCCCCCCCCCccCCCCCccCCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCcc---cee-eeeEEEe
Q 047974          402 EDCREFKPERWITEDGRIRHEPPHKFFSFNAGPRICIGKDIAFTLMKATAASIIHNYDVQVVKNHP---VTY-NLSIGFR  477 (497)
Q Consensus       402 ~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~---~~~-~~~~~~~  477 (497)
                      +||++|+||||+++++...  .+..|+|||+|+|.|+|++||++|++++++.|+++|++++.++.+   ... ..+.+..
T Consensus       384 ~dp~~F~PeR~l~~~~~~~--~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~  461 (476)
T 2fdv_A          384 SNPQDFNPQHFLNEKGQFK--KSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDIDVSPKHVGFATI  461 (476)
T ss_dssp             SSTTSCCGGGGBCTTSCBC--CCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEEESSCGGGCCCSCSEESSSEE
T ss_pred             CCccccCchhhCCCCCCCC--CCcCcccCCCCCCCCCChHHHHHHHHHHHHHHHhhcEEEcCCCCCCCCccccccceeec
Confidence            9999999999997654322  356899999999999999999999999999999999999987542   222 4455666


Q ss_pred             ecCceEEEEEecCC
Q 047974          478 MKHGLLARVSKRSA  491 (497)
Q Consensus       478 ~~~~~~~~~~~r~~  491 (497)
                      | .++++++++|+.
T Consensus       462 p-~~~~v~~~~R~~  474 (476)
T 2fdv_A          462 P-RNYTMSFLPRHH  474 (476)
T ss_dssp             C-CCCCEEEEEC--
T ss_pred             C-CceEEEEEeccc
Confidence            6 689999999964


No 11 
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens}
Probab=100.00  E-value=8.5e-73  Score=559.97  Aligned_cols=445  Identities=18%  Similarity=0.272  Sum_probs=323.9

Q ss_pred             hccCCCCCcccchhhHHHHhhccchHHHHHHHHHHHhCCeeEEeeecccCcceEEEcChhhHHHhhhcCCccccCCcccc
Q 047974           25 RKINPTPWNLPLLGMLASVILNINQLHDKVAQILEKTKGSFMIKGSWVAQYDMFLTSDPANVQHIMSTNFSKYHKGSEGR  104 (497)
Q Consensus        25 ~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~k~g~v~~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~~~~~~~~  104 (497)
                      ++.||||+++|++||++++..   +++.++.+++++||++|++   ++|+.++++|+||+++++|+.++...|.+++...
T Consensus         8 ~~~pPgP~~~P~iG~~~~~~~---~~~~~~~~~~~~yG~i~~~---~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~   81 (507)
T 3pm0_A            8 KGKPPGPFAWPLIGNAAAVGQ---AAHLSFARLARRYGDVFQI---RLGSCPIVVLNGERAIHQALVQQGSAFADRPSFA   81 (507)
T ss_dssp             --------------------C---CHHHHHHHHHHHHCSEEEE---EETTEEEEEECSHHHHHHHHTTTTTTSCBCCCCH
T ss_pred             CCCCcCCCCCCeeCchhhcCc---cHHHHHHHHHHHhCCEEEE---EECCccEEEECCHHHHHHHHHhCcHhhCCCCcch
Confidence            458999999999999998853   4788999999999999999   9999999999999999999987767888776654


Q ss_pred             cccc-ccCCcCeee-cCCchHHHHHHhhhcccCHHHHH-----HHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHHHH
Q 047974          105 KRFD-IFGETGLFN-SDFDEWKHQRKLARAFINHQKFQ-----QLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLLKR  177 (497)
Q Consensus       105 ~~~~-~~g~~~l~~-~~~~~w~~~R~~~~~~f~~~~l~-----~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~  177 (497)
                      .... ..|. ++++ .+|+.|+++|+++.+.|+.....     ..+...+.+. .+.+.+.+.+...++..+|+.+++..
T Consensus        82 ~~~~~~~g~-~l~~~~~g~~w~~~R~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~l~~~l~~~~~~~~~vd~~~~~~~  159 (507)
T 3pm0_A           82 SFRVVSGGR-SMAFGHYSEHWKVQRRAAHSMMRNFFTRQPRSRQVLEGHVLSE-ARELVALLVRGSADGAFLDPRPLTVV  159 (507)
T ss_dssp             HHHHGGGGT-CSSSSCSSHHHHHHHHHHHHHHHHSTTSSTTHHHHHHHHHHHH-HHHHHHHHHHTTGGGCCBCCHHHHHH
T ss_pred             HHHhhcCCC-ceEECCCChHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHH-HHHHHHHHHhhcccCCCcChHHHHHH
Confidence            4332 2344 6644 56999999999999876543221     1123445555 45556666554445678999999999


Q ss_pred             HHHHHHHHhhcCCCCCCCCCCC--CCCChHHHHHHHHH------HHHHHH-------HHHHHHhHHHHHHHHHHHHHHHH
Q 047974          178 TTFDFACLIATGHNPNSLSVGF--PEMGFPDAVDDACE------AILIRH-------LEKKLANGWRTIDQFWEKQKSMK  242 (497)
Q Consensus       178 ~~~~v~~~~~fG~~~~~~~~~~--~~~~~~~~~~~~~~------~~~~~~-------~~~~~~~~~~~~~~~~~~~i~~~  242 (497)
                      +++++++.++||.+++..+...  ....+...+.....      .+++++       ..+...++.+.+.+++.+.++++
T Consensus       160 ~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~lp~~~~~~~~~~~~~~~~~~~~~~~~i~~~  239 (507)
T 3pm0_A          160 AVANVMSAVCFGCRYSHDDPEFRELLSHNEEFGRTVGAGSLVDVMPWLQYFPNPVRTVFREFEQLNRNFSNFILDKFLRH  239 (507)
T ss_dssp             HHHHHHHHHHTSCCCCTTCHHHHHHTSCHHHHHHHHSTTCCTTTCGGGGGSCSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHccccCCCCCHHHHHHHHHHHHHHHhcccchHHHHhHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999886432110  00111111111100      001111       13455667778888888888887


Q ss_pred             HHHHHhccccccccchhhHHHHHhcCCCC--------CCCCCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHH
Q 047974          243 QEEIEKGMEAKEDEGIYSLLNCYLSGHEV--------TGPTPAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAE  314 (497)
Q Consensus       243 ~~~~~~~~~~~~~~~~~dll~~ll~~~~~--------~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~  314 (497)
                      ++....+      ....|+++.++...+.        .+..++++++..++..+++||+|||+++++|++++|++||++|
T Consensus       240 ~~~~~~~------~~~~d~l~~ll~~~~~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~  313 (507)
T 3pm0_A          240 CESLRPG------AAPRDMMDAFILSAEKKAAGDSHGGGARLDLENVPATITDIFGASQDTLSTALQWLLLLFTRYPDVQ  313 (507)
T ss_dssp             HHHCCTT------CCCCSHHHHHHHHHHHHHSCC----CCCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
T ss_pred             Hhccccc------cCCccHHHHHHHHhhhhccccccCCCCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHH
Confidence            7654321      2356888888854211        1235899999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhcccCCCCCCCCCChhhhhcchhHHHHHHHhhcCCCCCCcc-cccccCCCcccCCeeeCCCcEEEEecccc
Q 047974          315 TKIREELKRNFSQEGFNKPPLVRLNELNKLVYLHAALCETLRLYPPVPFE-IRIPLQPDVLPSGHQVNQNTHVLISAYSM  393 (497)
Q Consensus       315 ~~l~~Ei~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~-~r~~~~~~~~~~g~~ip~g~~v~~~~~~~  393 (497)
                      ++|++||+++++     .++.++.+++.+||||+|||+|+||++|+++.. .|.+.+|.++ +||.|||||.|+++.+++
T Consensus       314 ~kl~~Ei~~~~~-----~~~~~~~~~l~~lpyl~avi~E~lRl~p~~~~~~~r~~~~d~~~-~g~~ip~Gt~v~~~~~~~  387 (507)
T 3pm0_A          314 TRVQAELDQVVG-----RDRLPCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSV-LGYHIPKDTVVFVNQWSV  387 (507)
T ss_dssp             HHHHHHHHHHTC-----TTSCCCGGGGGGCHHHHHHHHHHHHHHCSSCBCSCEECSSCEEE-TTEEECTTCEEEEBSHHH
T ss_pred             HHHHHHHHHhcC-----CCCCCChhhcccChHHHHHHHHHHhcCCCcccCCCccccCCceE-cCEEECCCCEEEeChHHH
Confidence            999999999984     456789999999999999999999999999975 4655555555 999999999999999999


Q ss_pred             ccCCCCCCCCCCCCCCCCccCCCCCccCCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCccce--ee
Q 047974          394 ARMTSVWGEDCREFKPERWITEDGRIRHEPPHKFFSFNAGPRICIGKDIAFTLMKATAASIIHNYDVQVVKNHPVT--YN  471 (497)
Q Consensus       394 ~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~--~~  471 (497)
                      ||||++| +||++|+||||+++++......+..|+|||+|+|.|+|++||++|++++++.|+++|++++.++.+..  ..
T Consensus       388 ~~d~~~~-~dp~~F~PeRfl~~~~~~~~~~~~~~~pFg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~  466 (507)
T 3pm0_A          388 NHDPLKW-PNPENFDPARFLDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFRANPNEPAKMNFS  466 (507)
T ss_dssp             HSCTTTC-SSSSSCCGGGGBCTTSCBCHHHHTTCCSSCCSTTCCSCHHHHHHHHHHHHHHHHHHEEEEECTTCCSCCCEE
T ss_pred             hCCcccC-CCcCccCCCcccCCCCcccCCCcccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHeEEecCCCCCCCCCCC
Confidence            9999999 99999999999987543221123589999999999999999999999999999999999998765432  23


Q ss_pred             eeEEEeecCceEEEEEecCC
Q 047974          472 LSIGFRMKHGLLARVSKRSA  491 (497)
Q Consensus       472 ~~~~~~~~~~~~~~~~~r~~  491 (497)
                      .+.+..|+ +++|++++|..
T Consensus       467 ~~~~~~p~-~~~v~~~~R~~  485 (507)
T 3pm0_A          467 YGLTIKPK-SFKVNVTLRES  485 (507)
T ss_dssp             ESSSEEEC-SCCEEEEESSC
T ss_pred             CCccccCC-CcEEEEEEccc
Confidence            34455554 68999999974


No 12 
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A*
Probab=100.00  E-value=5.2e-72  Score=551.90  Aligned_cols=437  Identities=18%  Similarity=0.260  Sum_probs=334.8

Q ss_pred             hccCCCCCcccchhhHHHHhhccchHHHHHHHHHHHhCCeeEEeeecccCcceEEEcChhhHHHhhhcCCccccCCcccc
Q 047974           25 RKINPTPWNLPLLGMLASVILNINQLHDKVAQILEKTKGSFMIKGSWVAQYDMFLTSDPANVQHIMSTNFSKYHKGSEGR  104 (497)
Q Consensus        25 ~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~k~g~v~~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~~~~~~~~  104 (497)
                      .++||||+++|++||++++... +.++..+.+++++||++|++   ++|+.++|+|+||+++++++.++...|.+++...
T Consensus         7 ~~~PPgP~~lPliGnl~~l~~~-~~~~~~~~~~~~kYG~i~~~---~~g~~~~vvv~~p~~~k~il~~~~~~f~~rp~~~   82 (494)
T 3swz_A            7 AKYPKSLLSLPLVGSLPFLPRH-GHMHNNFFKLQKKYGPIYSV---RMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQMA   82 (494)
T ss_dssp             -----CCBCCCEEEEESSCTTS-SCHHHHHHHTHHHHCSEEEE---EETTEEEEEECSHHHHHHHHTTTTTTTBBCCCCH
T ss_pred             CCCCCCCCCCCeEcchHHhCCC-CchhHHHHHHHHHcCCEEEE---EeCCCCEEEECCHHHHHHHHHhCcHhhCCCCCcH
Confidence            3489999999999999877432 35788899999999999999   9999999999999999999998878888776654


Q ss_pred             ccc--cccCCcCeeecC-CchHHHHHHhhhcccCH--HHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHHHHHH
Q 047974          105 KRF--DIFGETGLFNSD-FDEWKHQRKLARAFINH--QKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLLKRTT  179 (497)
Q Consensus       105 ~~~--~~~g~~~l~~~~-~~~w~~~R~~~~~~f~~--~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~  179 (497)
                      ...  ...|. |+++++ |+.|+.+||++.++|+.  ..+..+ ...+.+. .+.+.+.+.+  ..+..+|+...+..++
T Consensus        83 ~~~~~~~~~~-gl~~~~~g~~wr~~Rr~~~~~f~~~~~~~~~~-~~~i~~~-~~~l~~~l~~--~~~~~vd~~~~~~~~t  157 (494)
T 3swz_A           83 TLDIASNNRK-GIAFADSGAHWQLHRRLAMATFALFKDGDQKL-EKIICQE-ISTLCDMLAT--HNGQSIDISFPVFVAV  157 (494)
T ss_dssp             HHHHHTTTTC-SSSSSCSSHHHHHHHHHHHHHTTTTSSSTTCH-HHHHHHH-HHHHHHHHHH--TTTEEECCHHHHHHHH
T ss_pred             HHHHhccCCC-CeEeCCCCHHHHHHHHHHHHHHHHhcchHHHH-HHHHHHH-HHHHHHHHHH--cCCCcccHHHHHHHHH
Confidence            322  12234 676655 99999999999999863  233333 3445555 3456666654  3467899999999999


Q ss_pred             HHHHHHhhcCCCCCCCCCCCCCCChHHHHHHHHH----HH----------HHHHH----HHHHHhHHHHHHHHHHHHHHH
Q 047974          180 FDFACLIATGHNPNSLSVGFPEMGFPDAVDDACE----AI----------LIRHL----EKKLANGWRTIDQFWEKQKSM  241 (497)
Q Consensus       180 ~~v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~----~~----------~~~~~----~~~~~~~~~~~~~~~~~~i~~  241 (497)
                      +++++.++||.+++..      ....+.+..+..    ..          +++++    .+...+..+.+.++++..+++
T Consensus       158 ~dvi~~~~fG~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~p~~~~~~~~~~~~~~~~~~~~~i~~  231 (494)
T 3swz_A          158 TNVISLICFNTSYKNG------DPELNVIQNYNEGIIDNLSKDSLVDLVPWLKIFPNKTLEKLKSHVKIRNDLLNKILEN  231 (494)
T ss_dssp             HHHHHHHHHSCCCCTT------CTHHHHHHHHHHHHHHHHCSSSSCCSSCGGGTSCCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHcCCcCCCC------CHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999987532      122222222211    11          11111    344555666666777777766


Q ss_pred             HHHHHHhccccccccchhhHHHHHhcCCC----------CCCCCCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcCh
Q 047974          242 KQEEIEKGMEAKEDEGIYSLLNCYLSGHE----------VTGPTPAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNP  311 (497)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~dll~~ll~~~~----------~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p  311 (497)
                      +++....       ....|+++.+++...          .++..++++++..++..+++||+|||+++++|++++|+.||
T Consensus       232 ~~~~~~~-------~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P  304 (494)
T 3swz_A          232 YKEKFRS-------DSITNMLDTLMQAKMNSDNGNAGPDQDSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNP  304 (494)
T ss_dssp             HTTTCCT-------TCCCSHHHHHHHHHHTSCCC----CCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
T ss_pred             HHHhhcc-------cchhHHHHHHHHHHHhhhcccccccccccccCHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhCH
Confidence            5433211       235688988886421          01234889999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCChhhhhcchhHHHHHHHhhcCCCCCCcc-cccccCCCcccCCeeeCCCcEEEEec
Q 047974          312 FAETKIREELKRNFSQEGFNKPPLVRLNELNKLVYLHAALCETLRLYPPVPFE-IRIPLQPDVLPSGHQVNQNTHVLISA  390 (497)
Q Consensus       312 ~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~-~r~~~~~~~~~~g~~ip~g~~v~~~~  390 (497)
                      ++|+|+++||+++++     .++.++.+++.+||||+|||+|+||++|++|.. .|.+.+|.++ +||.|||||.|+++.
T Consensus       305 ~~q~kl~~Ei~~v~~-----~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~-~g~~ip~Gt~v~~~~  378 (494)
T 3swz_A          305 QVKKKLYEEIDQNVG-----FSRTPTISDRNRLLLLEATIREVLRLRPVAPMLIPHKANVDSSI-GEFAVDKGTEVIINL  378 (494)
T ss_dssp             HHHHHHHHHHHHHTC-----SSSCCCGGGGGTCHHHHHHHHHHHHHSCSSTTCSCEECSSSEEE-TTEEECTTCEEEECH
T ss_pred             HHHHHHHHHHHHhcC-----CCCCCCHHHHhcCHHHHHHHHHHHHhcCCcccccceecCCCceE-CCEEeCCCCEEEEeh
Confidence            999999999999994     456789999999999999999999999999985 4666666555 999999999999999


Q ss_pred             cccccCCCCCCCCCCCCCCCCccCCCCCccCCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCccc--
Q 047974          391 YSMARMTSVWGEDCREFKPERWITEDGRIRHEPPHKFFSFNAGPRICIGKDIAFTLMKATAASIIHNYDVQVVKNHPV--  468 (497)
Q Consensus       391 ~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~--  468 (497)
                      +++||||++| +||++|+||||+++++.....+...|+|||+|+|.|+|++||++|++++++.|+++|+|++.++.+.  
T Consensus       379 ~~~~~d~~~~-~dp~~F~PeRfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~  457 (494)
T 3swz_A          379 WALHHNEKEW-HQPDQFMPERFLNPAGTQLISPSVSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVPDDGQLPS  457 (494)
T ss_dssp             HHHHHCTTTS-SSTTSCCGGGGBCTTSSSBCCCCSCCCTTCCGGGSCSCHHHHHHHHHHHHHHHHHHEEEECCSSCCCCC
T ss_pred             HHhhCCcccC-CCcccCCcccccCCCCccccCCCCcccCCCCCCCCCCcHHHHHHHHHHHHHHHHHhcEEeeCCCCCCCC
Confidence            9999999999 9999999999998765433234678999999999999999999999999999999999999864322  


Q ss_pred             -eeeeeEEEeecCceEEEEEecCC
Q 047974          469 -TYNLSIGFRMKHGLLARVSKRSA  491 (497)
Q Consensus       469 -~~~~~~~~~~~~~~~~~~~~r~~  491 (497)
                       ....+.+.. +.+++|++++|+.
T Consensus       458 ~~~~~~~~~~-p~~~~v~~~~R~~  480 (494)
T 3swz_A          458 LEGIPKVVFL-IDSFKVKIKVRQA  480 (494)
T ss_dssp             CSCEESSSEE-CCCCCEEEEECHH
T ss_pred             CCCccceeec-CCCcEEEEEEcCc
Confidence             222334444 4689999999964


No 13 
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A*
Probab=100.00  E-value=2.7e-72  Score=551.19  Aligned_cols=437  Identities=16%  Similarity=0.208  Sum_probs=332.7

Q ss_pred             ccCCCCCcccchhhHHHHhhccchHHHHHHHHHHHhCCeeEEeeecccCcceEEEcChhhHHHhhhcCCccccCCccccc
Q 047974           26 KINPTPWNLPLLGMLASVILNINQLHDKVAQILEKTKGSFMIKGSWVAQYDMFLTSDPANVQHIMSTNFSKYHKGSEGRK  105 (497)
Q Consensus        26 ~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~k~g~v~~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~~~~~~~~~  105 (497)
                      +.||||+++|++||++++.  .++++.++.+++++||++|++   ++|+.+.++++||+++++|+.++...|.+++....
T Consensus        11 ~~pPgP~~~p~iG~~~~~~--~~~~~~~~~~l~~~yG~v~~~---~~g~~~~v~v~~~~~~~~il~~~~~~f~~~~~~~~   85 (477)
T 1r9o_A           11 KLPPGPTPLPVIGNILQIG--IKDISKSLTNLSKVYGPVFTL---YFGLKPIVVLHGYEAVKEALIDLGEEFSGRGIFPL   85 (477)
T ss_dssp             BCCCCSSSCC-----CCBC--HHHHHHHHHHHHHHHCSEEEE---ESSSCEEEEECSHHHHHHHHTTTTTTTCEECCCSC
T ss_pred             CCCCCCCCCceeccHhhcC--CCChHHHHHHHHHHhCCEEEE---EECCCcEEEECCHHHHHHHHhcccHhhCCCCcchh
Confidence            4799999999999987762  235788999999999999999   88989999999999999999765566766543221


Q ss_pred             ccc-ccCCcCeeecCCchHHHHHHhhhcccCHHH--HHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHHHHHHHHH
Q 047974          106 RFD-IFGETGLFNSDFDEWKHQRKLARAFINHQK--FQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLLKRTTFDF  182 (497)
Q Consensus       106 ~~~-~~g~~~l~~~~~~~w~~~R~~~~~~f~~~~--l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~v  182 (497)
                      ... ..|. ++++++|+.|+++||++.+.|+...  ++.+ .+.+.+. .+.+.+.+.+  ..++++|+.+.+..+++++
T Consensus        86 ~~~~~~~~-~l~~~~g~~w~~~Rr~~~~~~~~~~~~~~~~-~~~i~~~-~~~l~~~l~~--~~~~~vd~~~~~~~~~~~v  160 (477)
T 1r9o_A           86 AERANRGF-GIVFSNGKKWKEIRRFSLMTLRNFGMGKRSI-EDRVQEE-ARCLVEELRK--TKASPCDPTFILGCAPCNV  160 (477)
T ss_dssp             CCTTTCTT-SSTTCCHHHHHHHHHHHHHHHTTSSSCSSCH-HHHHHHH-HHHHHHHHHT--TTTSCBCTHHHHHHHHHHH
T ss_pred             hhhccCCC-ceEecCChHHHHHHHHHHHHHHHhCCChHHH-HHHHHHH-HHHHHHHHHh--cCCCccChHHHHHHHHHHH
Confidence            222 2345 8888899999999999999987752  2333 2335455 3445555543  2346799999999999999


Q ss_pred             HHHhhcCCCCCCCCCCCCCCChHHHHHHHHHHH---------HHHH----H---HHHHHhHHHHHHHHHHHHHHHHHHHH
Q 047974          183 ACLIATGHNPNSLSVGFPEMGFPDAVDDACEAI---------LIRH----L---EKKLANGWRTIDQFWEKQKSMKQEEI  246 (497)
Q Consensus       183 ~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~----~---~~~~~~~~~~~~~~~~~~i~~~~~~~  246 (497)
                      ++.++||.+++..+.  ....+.+.+.......         ...+    +   .++..++.+.+.+++.+.|+++++..
T Consensus       161 i~~~~fG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~lp~~~~~~~~~~~~~~~~~~~~i~~r~~~~  238 (477)
T 1r9o_A          161 ICSIIFHKRFDYKDQ--QFLNLMEKLNENIKILSSPWIQICNNFSPIIDYFPGTHNKLLKNVAFMKSYILEKVKEHQESM  238 (477)
T ss_dssp             HHHHHHSCCCCTTCH--HHHHHHHHHHHHHHHHTCCBC-------CCCSCCTTCHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHccCcCCCCCH--HHHHHHHHHHHHHHhhccchhHHHhhccHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            999999998763221  0111222222222110         0010    0   23456677788888888888876532


Q ss_pred             HhccccccccchhhHHHHHhcCC----CCCCCCCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHH
Q 047974          247 EKGMEAKEDEGIYSLLNCYLSGH----EVTGPTPAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELK  322 (497)
Q Consensus       247 ~~~~~~~~~~~~~dll~~ll~~~----~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~  322 (497)
                      +.       ....|+++.++...    ...+..++++++.+++..+++||+|||+++++|++++|++||++|++|++||+
T Consensus       239 ~~-------~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~  311 (477)
T 1r9o_A          239 DM-------NNPQDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIE  311 (477)
T ss_dssp             CT-------TCCCSHHHHHHHHHHHHTTSCSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred             CC-------CCchHHHHHHHHHHHhhhccCCCCCCHHHHHHHHHHHhhcccccHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence            11       22468888887531    12235689999999999999999999999999999999999999999999999


Q ss_pred             hhcccCCCCCCCCCChhhhhcchhHHHHHHHhhcCCCCCCc-ccccccCCCcccCCeeeCCCcEEEEeccccccCCCCCC
Q 047974          323 RNFSQEGFNKPPLVRLNELNKLVYLHAALCETLRLYPPVPF-EIRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWG  401 (497)
Q Consensus       323 ~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~-~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g  401 (497)
                      ++++     .+..++.+++.+||||+|||+|+||++|+++. ..|.+.+|.++ +||.|||||.|+++.+++||||++| 
T Consensus       312 ~~~~-----~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~-~g~~Ip~Gt~V~~~~~~~~rd~~~~-  384 (477)
T 1r9o_A          312 RVIG-----RNRSPCMQDRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKF-RNYLIPKGTTILISLTSVLHDNKEF-  384 (477)
T ss_dssp             HHTC-----SSSCCCGGGGGGCHHHHHHHHHHHHHHTSSTTCSCEECSSCEEE-TTEEECTTCEEEECSHHHHTCTTTS-
T ss_pred             HhcC-----CCCCCChHhhccCcHHHHHHHHHHHhcCCCCCCCceeccCCccc-cceecCCCCEEEEecHHhhCCcccC-
Confidence            9984     34568999999999999999999999999995 67888777555 9999999999999999999999999 


Q ss_pred             CCCCCCCCCCccCCCCCccCCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCcc---cee-eeeEEEe
Q 047974          402 EDCREFKPERWITEDGRIRHEPPHKFFSFNAGPRICIGKDIAFTLMKATAASIIHNYDVQVVKNHP---VTY-NLSIGFR  477 (497)
Q Consensus       402 ~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~---~~~-~~~~~~~  477 (497)
                      +||++|+||||+++++...  ....|+|||+|+|.|+|++||++|++++++.|+++|++++.++.+   ... ..+.+..
T Consensus       385 ~dP~~F~PeR~l~~~~~~~--~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~  462 (477)
T 1r9o_A          385 PNPEMFDPHHFLDEGGNFK--KSKYFMPFSAGKRICVGEALAGMELFLFLTSILQNFNLKSLVDPKNLDTTPVVNGFASV  462 (477)
T ss_dssp             SSTTSCCGGGGBCTTSCBC--CCTTCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEEESSCGGGCCCCCBCCSSSCB
T ss_pred             CCccccCccceECCCCCcC--ccccccCCCCccCCCCCHHHHHHHHHHHHHHHHHhcEEecCCCCCCCCccCCcCceeec
Confidence            9999999999997654322  356899999999999999999999999999999999999987542   122 3455556


Q ss_pred             ecCceEEEEEecCC
Q 047974          478 MKHGLLARVSKRSA  491 (497)
Q Consensus       478 ~~~~~~~~~~~r~~  491 (497)
                      | .++++++++|+.
T Consensus       463 p-~~~~~~~~~R~~  475 (477)
T 1r9o_A          463 P-PFYQLCFIPIHH  475 (477)
T ss_dssp             C-CCCCEEEEECCC
T ss_pred             C-CCeEEEEEEecc
Confidence            5 689999999974


No 14 
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A*
Probab=100.00  E-value=1.4e-71  Score=541.91  Aligned_cols=435  Identities=15%  Similarity=0.179  Sum_probs=322.4

Q ss_pred             ccCCC-CCcccchhhHHHHhhccchHHHHHHHHHHHhCCeeEEeeecccCcceEEEcChhhHHHhhhcCCccccCCcccc
Q 047974           26 KINPT-PWNLPLLGMLASVILNINQLHDKVAQILEKTKGSFMIKGSWVAQYDMFLTSDPANVQHIMSTNFSKYHKGSEGR  104 (497)
Q Consensus        26 ~~ppg-p~~~P~~G~~~~~~~~~~~~~~~~~~~~~k~g~v~~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~~~~~~~~  104 (497)
                      ++||| |+++|++||+.++..+   ++.++.+++++||++|.+   ++++.++++++||+++++++.++...|.+++.+.
T Consensus         4 ~~PPg~p~~~P~iG~~~~~~~~---~~~~~~~l~~~yG~v~~~---~~~~~~~~vv~~~~~~~~il~~~~~~~~~~~~~~   77 (455)
T 2cib_A            4 VALPRVSGGHDEHGHLEEFRTD---PIGLMQRVRDELGDVGTF---QLAGKQVVLLSGSHANEFFFRAGDDDLDQAKAYP   77 (455)
T ss_dssp             -CCCBCSCCCBTTBTHHHHTTC---HHHHHHHHHHHHCSEEEE---EETTEEEEEECSHHHHHHHHHCCTTTEECTTSCG
T ss_pred             CCCCCCCCCCCCccCHHHHhhC---hHHHHHHHHHHcCCEEEE---EeCCceEEEECCHHHHHHHHhcCccccCcccchh
Confidence            57897 8899999999998544   788999999999999998   8889899999999999999987655677766553


Q ss_pred             ccccccCCcCeeecCCchHHHHHHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHHHHHHHHHHH
Q 047974          105 KRFDIFGETGLFNSDFDEWKHQRKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLLKRTTFDFAC  184 (497)
Q Consensus       105 ~~~~~~g~~~l~~~~~~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~v~~  184 (497)
                      .....+|. +++ .+++.|+++|++++++|++++++.+.+ .+.+. .+.+.+.+.    .++.+|+.+++..+++++++
T Consensus        78 ~~~~~~g~-~~~-~~~~~~~~~R~~~~~~f~~~~l~~~~~-~i~~~-~~~l~~~~~----~~~~vd~~~~~~~~~~~vi~  149 (455)
T 2cib_A           78 FMTPIFGE-GVV-FDASPERRKEMLHNAALRGEQMKGHAA-TIEDQ-VRRMIADWG----EAGEIDLLDFFAELTIYTSS  149 (455)
T ss_dssp             GGHHHHC----------------------CCHHHHHHHHH-HHHHH-HHHHHTTCC----SEEEEEHHHHHHHHHHHHHH
T ss_pred             HHHhhcCC-ccc-cCcHHHHHHHhhhccccCHHHHHHHHH-HHHHH-HHHHHHHhC----CCCcEeHHHHHHHHHHHHHH
Confidence            22244565 654 579999999999999999999988754 45554 344444432    23579999999999999999


Q ss_pred             HhhcCCCCCCCCCCCCCCChHHHHHHHHHHHH-----HH----HHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccccccc
Q 047974          185 LIATGHNPNSLSVGFPEMGFPDAVDDACEAIL-----IR----HLEKKLANGWRTIDQFWEKQKSMKQEEIEKGMEAKED  255 (497)
Q Consensus       185 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  255 (497)
                      .++||.+++...    ...+.+.+..+.....     ..    ...++..++.+.+.+++.+.|+++++.....      
T Consensus       150 ~~~fG~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~------  219 (455)
T 2cib_A          150 ACLIGKKFRDQL----DGRFAKLYHELERGTDPLAYVDPYLPIESFRRRDEARNGLVALVADIMNGRIANPPTD------  219 (455)
T ss_dssp             HHHTCHHHHTTC----CHHHHHHHHHHHTTCCGGGGTCTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHCC---------
T ss_pred             HHHcCCCcchhh----hHHHHHHHHHHHhhhhHHHHhcccCCChhHHHHHHHHHHHHHHHHHHHHHHHhcccCC------
Confidence            999998764321    1233343333321100     00    0123455677788888888888876532110      


Q ss_pred             cchhhHHHHHhcCCCCCCCC-CchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhhcccCCCCCCC
Q 047974          256 EGIYSLLNCYLSGHEVTGPT-PAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRNFSQEGFNKPP  334 (497)
Q Consensus       256 ~~~~dll~~ll~~~~~~~~~-l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~  334 (497)
                      ....|+++.+++...+++.. ++++++.++++.+++||+|||+++++|++++|++||++|++|++|++++++     .+.
T Consensus       220 ~~~~dll~~ll~~~~~~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~-----~~~  294 (455)
T 2cib_A          220 KSDRDMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYG-----DGR  294 (455)
T ss_dssp             --CCCHHHHHHHCBCTTSSBSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHGG-----GCC
T ss_pred             CCcccHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhC-----CCC
Confidence            11239999999876544455 899999999999999999999999999999999999999999999999985     235


Q ss_pred             CCChhhhhcchhHHHHHHHhhcCCCCCCcccccccCCCcccCCeeeCCCcEEEEeccccccCCCCCCCCCCCCCCCCccC
Q 047974          335 LVRLNELNKLVYLHAALCETLRLYPPVPFEIRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWGEDCREFKPERWIT  414 (497)
Q Consensus       335 ~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~  414 (497)
                      .++.+++.+||||+|||+|+||++|+++...|.+.+|.++ +||.|||||.|+++.+++||||++| +||++|+||||++
T Consensus       295 ~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~l-~g~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~l~  372 (455)
T 2cib_A          295 SVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEV-QGHRIHEGDLVAASPAISNRIPEDF-PDPHDFVPARYEQ  372 (455)
T ss_dssp             CHHHHTTSCCHHHHHHHHHHHHHSCSCCCEEEEECSCEEE-TTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCGGGGST
T ss_pred             CCCHHHHhcCHHHHHHHHHHHhcCCcccccceeeCCCceE-CCEEECCCCEEEEChHHhcCCcccC-CCccccCcccCCC
Confidence            6889999999999999999999999999878888887776 9999999999999999999999999 9999999999997


Q ss_pred             CCCCccCCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCcc-ce-eeeeEEEeecCceEEEEEecCCC
Q 047974          415 EDGRIRHEPPHKFFSFNAGPRICIGKDIAFTLMKATAASIIHNYDVQVVKNHP-VT-YNLSIGFRMKHGLLARVSKRSAQ  492 (497)
Q Consensus       415 ~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~r~~~  492 (497)
                      .+.... ..+..|+|||+|+|.|+|++||++|++++++.|+++|++++.++.. .. .....+..|+.+++|++++|..+
T Consensus       373 ~~~~~~-~~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~R~~~  451 (455)
T 2cib_A          373 PRQEDL-LNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQPPESYRNDHSKMVVQLAQPAAVRYRRRTGV  451 (455)
T ss_dssp             TTCHHH-HCTTTCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHEEEEESSCGGGCCEECSSSSCEECSCCEEEEEEC---
T ss_pred             CCcccc-cCCccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHheEEEeCCCccccccccccccccCCCCceEEEEECccc
Confidence            532211 1256799999999999999999999999999999999999874221 11 11334566777899999999754


No 15 
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ...
Probab=100.00  E-value=3.3e-70  Score=534.19  Aligned_cols=432  Identities=19%  Similarity=0.318  Sum_probs=340.7

Q ss_pred             cCCCCCcccchhhHHHHhhccchHHHHHHHHHHHhCCeeEEeeecccCcceEEEcChhhHHHhhhcCCccccCCcc--cc
Q 047974           27 INPTPWNLPLLGMLASVILNINQLHDKVAQILEKTKGSFMIKGSWVAQYDMFLTSDPANVQHIMSTNFSKYHKGSE--GR  104 (497)
Q Consensus        27 ~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~k~g~v~~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~~~~~~--~~  104 (497)
                      .||||+++|++||++++..  ++++..+.+++++||++|++   ++++.+.++|+||+++++|+.+.  .|.+...  ..
T Consensus         4 ~~PGP~~~p~iG~l~~~~~--~~~~~~~~~~~~~yG~v~~~---~~~~~~~v~v~~~~~~~~il~~~--~f~~~~~~~~~   76 (470)
T 2ij2_A            4 EMPQPKTFGELKNLPLLNT--DKPVQALMKIADELGEIFKF---EAPGRVTRYLSSQRLIKEACDES--RFDKNLSQALK   76 (470)
T ss_dssp             CCCCCCCCGGGTTGGGGCS--SCHHHHHHHHHHHHCSEEEE---EETTEEEEEECCHHHHHHHTCTT--TEEECCCHHHH
T ss_pred             CCCCCCCCCccccHHHHhc--ccchHHHHHHHHHhCCeEEE---ecCCccEEEECCHHHHHHHHhhc--CcCcCchhHHH
Confidence            5789999999999988743  35777888999999999999   88889999999999999999653  4544322  11


Q ss_pred             ccccccCCcCeeec--CCchHHHHHHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHHHHHHHHH
Q 047974          105 KRFDIFGETGLFNS--DFDEWKHQRKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLLKRTTFDF  182 (497)
Q Consensus       105 ~~~~~~g~~~l~~~--~~~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~v  182 (497)
                      ......|. +++..  +++.|+++||++.++|++..++.+.+ .+.+. .+.+.+.+... ..++.+|+.+.+..+++++
T Consensus        77 ~~~~~~~~-~l~~~~~~g~~w~~~Rr~~~~~fs~~~l~~~~~-~i~~~-~~~l~~~l~~~-~~~~~vd~~~~~~~~~~~v  152 (470)
T 2ij2_A           77 FVRDFAGD-GLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHA-MMVDI-AVQLVQKWERL-NADEHIEVPEDMTRLTLDT  152 (470)
T ss_dssp             HHHHHHTT-SGGGSCTTSHHHHHHHHHHGGGGSTTTHHHHHH-HHHHH-HHHHHHHHHTC-CTTCCEEHHHHHHHHHHHH
T ss_pred             HHHHhcCC-ceEEcCCCchHHHHHHHHhccccCHHHHHHHHH-HHHHH-HHHHHHHHHhh-CCCCeEEHHHHHHHHHHHH
Confidence            11123355 77765  89999999999999999999988754 45555 45555555432 2346799999999999999


Q ss_pred             HHHhhcCCCCCCCCCCCCCCChHHHHHHHHHHHH--------H----HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhcc
Q 047974          183 ACLIATGHNPNSLSVGFPEMGFPDAVDDACEAIL--------I----RHLEKKLANGWRTIDQFWEKQKSMKQEEIEKGM  250 (497)
Q Consensus       183 ~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  250 (497)
                      ++.++||.+++..+.+ ....+.+.+........        .    ....+...++.+.+.+++.+.|+++++..    
T Consensus       153 i~~~~fG~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~----  227 (470)
T 2ij2_A          153 IGLCGFNYRFNSFYRD-QPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASG----  227 (470)
T ss_dssp             HHHHHHSCCCCGGGCS-SCCHHHHHHHHHHHHHHHTC---CTTSGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----
T ss_pred             HHHHHcCCcccccccC-CCCHHHHHHHHHHHHHHHHHhhhhhHhhccchHHHHHHHHHHHHHHHHHHHHHHHHhcc----
Confidence            9999999988754221 12334444443332111        0    01134455667788888888888776531    


Q ss_pred             ccccccchhhHHHHHhcCCCC-CCCCCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhhcccCC
Q 047974          251 EAKEDEGIYSLLNCYLSGHEV-TGPTPAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRNFSQEG  329 (497)
Q Consensus       251 ~~~~~~~~~dll~~ll~~~~~-~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~  329 (497)
                           ....|+++.+++..++ ++..++++++.+++..+++||+|||+++++|++++|++||++|+++++|++++++   
T Consensus       228 -----~~~~dll~~ll~~~~~~~~~~ls~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~---  299 (470)
T 2ij2_A          228 -----EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLV---  299 (470)
T ss_dssp             -----CCCSSHHHHHHHCCCTTTCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCC---
T ss_pred             -----cCchhHHHHHHhccCcccCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHcC---
Confidence                 2346899999987542 3456999999999999999999999999999999999999999999999999984   


Q ss_pred             CCCCCCCChhhhhcchhHHHHHHHhhcCCCCCCcccccccCCCcccCC-eeeCCCcEEEEeccccccCCCCCCCCCCCCC
Q 047974          330 FNKPPLVRLNELNKLVYLHAALCETLRLYPPVPFEIRIPLQPDVLPSG-HQVNQNTHVLISAYSMARMTSVWGEDCREFK  408 (497)
Q Consensus       330 ~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g-~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~  408 (497)
                        . ..++.+++.+||||+|||+|+||++|+++...|.+.+|.++ +| |.|||||.|+++.+++||||++||+||++|+
T Consensus       300 --~-~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~r~~~~d~~~-~g~~~Ip~Gt~V~~~~~~~~rdp~~~g~dP~~F~  375 (470)
T 2ij2_A          300 --D-PVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVL-GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFR  375 (470)
T ss_dssp             --S-SSCCHHHHHTCHHHHHHHHHHHHHSCSSCEEEEEESSCEEE-TTTEEECTTCEEEEEHHHHTTCHHHHCSCTTSCC
T ss_pred             --C-CCCCHHHHhCCHHHHHHHHHHHhcCCCccccceeccCCccc-CCceEeCCCCEEEechHHhcCCHhhhCCCccccC
Confidence              2 35899999999999999999999999999888888888665 88 9999999999999999999999999999999


Q ss_pred             CCCccCCCCCccCCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCccceeeeeEEEeecCceEEEEEe
Q 047974          409 PERWITEDGRIRHEPPHKFFSFNAGPRICIGKDIAFTLMKATAASIIHNYDVQVVKNHPVTYNLSIGFRMKHGLLARVSK  488 (497)
Q Consensus       409 P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  488 (497)
                      |||| ++   ....++..|+|||+|+|.|+|++||++|++++++.|+++|+++..++.+.......+..|. +++|++++
T Consensus       376 PeR~-~~---~~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~p~-~~~v~~~~  450 (470)
T 2ij2_A          376 PERF-EN---PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE-GFVVKAKS  450 (470)
T ss_dssp             GGGG-SS---GGGSCTTSCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEECTTCCCCCEEESSSEEET-TCEEEEEE
T ss_pred             cccc-CC---CCcCCCccccCCCCCCCcCCcHHHHHHHHHHHHHHHHHHeeEeeCCCCccccccceEecCC-CeEEEEEE
Confidence            9999 32   1112357899999999999999999999999999999999999222223333445567776 89999999


Q ss_pred             cCC
Q 047974          489 RSA  491 (497)
Q Consensus       489 r~~  491 (497)
                      |..
T Consensus       451 R~~  453 (470)
T 2ij2_A          451 KKI  453 (470)
T ss_dssp             CCC
T ss_pred             ccC
Confidence            975


No 16 
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens}
Probab=100.00  E-value=1.2e-71  Score=548.76  Aligned_cols=441  Identities=18%  Similarity=0.268  Sum_probs=335.3

Q ss_pred             hccC--CCCCcccchhhHHHHhhccchHHHHHHHHHHHhCCeeEEeeecccCcceEEEcChhhHHHhhhcCCccccCCcc
Q 047974           25 RKIN--PTPWNLPLLGMLASVILNINQLHDKVAQILEKTKGSFMIKGSWVAQYDMFLTSDPANVQHIMSTNFSKYHKGSE  102 (497)
Q Consensus        25 ~~~p--pgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~k~g~v~~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~~~~~~  102 (497)
                      +++|  |||+++|++||++++..   +++..+.+++++||+||.+   ++|+.++++++||+++++|+.++...|.+++.
T Consensus        13 ~~lp~~PgP~~~p~~G~~~~~~~---~~~~~~~~l~~~yG~v~~~---~~g~~~~vvv~~~~~i~~il~~~~~~f~~r~~   86 (495)
T 2hi4_A           13 KGLKSPPEPWGWPLLGHVLTLGK---NPHLALSRMSQRYGDVLQI---RIGSTPVLVLSRLDTIRQALVRQGDDFKGRPD   86 (495)
T ss_dssp             TTCBCCCCCCCBTTTBTHHHHTT---CHHHHHHHHHHHHCSEEEE---EETTEEEEEECSHHHHHHHHTTTGGGSCBCCC
T ss_pred             CCCCCCCCCCCCcceeeHHhcCc---cHHHHHHHHHHHhCCEEEE---EECCccEEEECCHHHHHHHHHhcchhhCCCCC
Confidence            4466  99999999999998854   4788999999999999998   88999999999999999999876567876654


Q ss_pred             ccccccccCCcCeeec--CCchHHHHHHhhhcccCHH---HH---H---HHHHHHhHHHHHhhHHHHhhhhcCCCceeeH
Q 047974          103 GRKRFDIFGETGLFNS--DFDEWKHQRKLARAFINHQ---KF---Q---QLMAKIVPEMIERGLIPVLDHVSEEKMLVDF  171 (497)
Q Consensus       103 ~~~~~~~~g~~~l~~~--~~~~w~~~R~~~~~~f~~~---~l---~---~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl  171 (497)
                      ........+..+++++  +|+.|+++||+++++|+..   ++   .   .+ .+.+.+. .+.+.+.+.+...+++++|+
T Consensus        87 ~~~~~~~~~~~~l~~~~~~g~~w~~~Rr~~~~~f~~~s~~~~~~~~~~~~~-~~~i~~~-~~~l~~~l~~~~~~~~~~d~  164 (495)
T 2hi4_A           87 LYTSTLITDGQSLTFSTDSGPVWAARRRLAQNALNTFSIASDPASSSSCYL-EEHVSKE-AKALISRLQELMAGPGHFDP  164 (495)
T ss_dssp             CHHHHTSTTSCCTTTSSCCSHHHHHHHHHHHHHHHHTTTSBCSSCSSCBHH-HHHHHHH-HHHHHHHHHHHHHTTSCBCH
T ss_pred             cHHHHHhcCCCCEEEcCCCChHHHHHHHHHHHHHHHhccCcccccchhhhH-HHHHHHH-HHHHHHHHHHhccCCCccch
Confidence            4322222222377776  6999999999999986532   11   0   22 3445555 45555555543334568999


Q ss_pred             HHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCChHHHHHHHHHH----------HHHH----HHHHHHHhHHHHHHHHHHH
Q 047974          172 QDLLKRTTFDFACLIATGHNPNSLSVGFPEMGFPDAVDDACEA----------ILIR----HLEKKLANGWRTIDQFWEK  237 (497)
Q Consensus       172 ~~~~~~~~~~v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~----~~~~~~~~~~~~~~~~~~~  237 (497)
                      .+.+..+++++++.++||.+++..+..  ...+.+.+..+...          ++++    ...++..++.+.+.+++.+
T Consensus       165 ~~~~~~~~~dvi~~~~fG~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~l~~lp~~~~~~~~~~~~~~~~~~~~  242 (495)
T 2hi4_A          165 YNQVVVSVANVIGAMCFGQHFPESSDE--MLSLVKNTHEFVETASSGNPLDFFPILRYLPNPALQRFKAFNQRFLWFLQK  242 (495)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGSCTTCHH--HHHHHTTTHHHHTTSSTTCGGGTCGGGGGSCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCCCCCCCCHH--HHHHHHHHHHHHHhcccchHHHHhHHHHhcCchHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999977532110  00111111111110          0011    1134556677888889999


Q ss_pred             HHHHHHHHHHhccccccccchhhHHHHHhcCC----CCCCCCCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHH
Q 047974          238 QKSMKQEEIEKGMEAKEDEGIYSLLNCYLSGH----EVTGPTPAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFA  313 (497)
Q Consensus       238 ~i~~~~~~~~~~~~~~~~~~~~dll~~ll~~~----~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~  313 (497)
                      .|+++++..+.       ....|+++.+++..    .+.+..++++++.+++..+++||+|||+++++|++++|++||++
T Consensus       243 ~i~~r~~~~~~-------~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~  315 (495)
T 2hi4_A          243 TVQEHYQDFDK-------NSVRDITGALFKHSKKGPRASGNLIPQEKIVNLVNDIFGAGFDTVTTAISWSLMYLVTKPEI  315 (495)
T ss_dssp             HHHHHHHTCCT-------TCCCSHHHHHHHHHHHCCEETTEECCTHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
T ss_pred             HHHHHHHhhcc-------cccccHHHHHHHHhhhccCccccCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhCHHH
Confidence            99888754211       23468999888541    11234589999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhcccCCCCCCCCCChhhhhcchhHHHHHHHhhcCCCCCCc-ccccccCCCcccCCeeeCCCcEEEEeccc
Q 047974          314 ETKIREELKRNFSQEGFNKPPLVRLNELNKLVYLHAALCETLRLYPPVPF-EIRIPLQPDVLPSGHQVNQNTHVLISAYS  392 (497)
Q Consensus       314 ~~~l~~Ei~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~-~~r~~~~~~~~~~g~~ip~g~~v~~~~~~  392 (497)
                      |+++++||+++++     .++.++.+++.+||||+|||+|+||++|+++. ..|.+.+|.++ +||.|||||.|.++.++
T Consensus       316 ~~kl~~Ei~~v~~-----~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~~~R~~~~d~~l-~G~~Ip~Gt~V~~~~~~  389 (495)
T 2hi4_A          316 QRKIQKELDTVIG-----RERRPRLSDRPQLPYLEAFILETFRHSSFLPFTIPHSTTRDTTL-NGFYIPKKCCVFVNQWQ  389 (495)
T ss_dssp             HHHHHHHHHHHTT-----TSSCCCGGGSTTCHHHHHHHHHHHHHHCSSCBCSCEECSSCEEE-TTEEECTTCEEEEBHHH
T ss_pred             HHHHHHHHHHhcC-----CCCCCChHHhccCHHHHHHHHHHHHccCCccCCCccccCCCeeE-eCeEECCCCEEEeChHH
Confidence            9999999999984     34568999999999999999999999999996 56777776665 99999999999999999


Q ss_pred             cccCCCCCCCCCCCCCCCCccCCCCC-ccCCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCccc--e
Q 047974          393 MARMTSVWGEDCREFKPERWITEDGR-IRHEPPHKFFSFNAGPRICIGKDIAFTLMKATAASIIHNYDVQVVKNHPV--T  469 (497)
Q Consensus       393 ~~~d~~~~g~~p~~F~P~Rfl~~~~~-~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~--~  469 (497)
                      +||||++| +||++|+||||+++++. .....+..|+|||+|+|.|+|++||++|++++++.|+++|++++.++.+.  .
T Consensus       390 ~~rdp~~~-~dP~~F~PeRfl~~~~~~~~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~  468 (495)
T 2hi4_A          390 VNHDPELW-EDPSEFRPERFLTADGTAINKPLSEKMMLFGMGKRRCIGEVLAKWEIFLFLAILLQQLEFSVPPGVKVDLT  468 (495)
T ss_dssp             HHHCTTTC-SSTTSCCGGGGBCTTSSSBCHHHHTTCCCSCCGGGCCTTHHHHHHHHHHHHHHHHHHCEEECCTTCCCCCC
T ss_pred             hhCCcccC-CCcCccCcccccCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEeCCCCCCCCcc
Confidence            99999999 99999999999976432 11113467999999999999999999999999999999999998765432  2


Q ss_pred             eeeeEEEeecCce-EEEEEecCC
Q 047974          470 YNLSIGFRMKHGL-LARVSKRSA  491 (497)
Q Consensus       470 ~~~~~~~~~~~~~-~~~~~~r~~  491 (497)
                      ...+.+..|. ++ +|+++ |..
T Consensus       469 ~~~~~~~~p~-~~~~v~~~-R~~  489 (495)
T 2hi4_A          469 PIYGLTMKHA-RCEHVQAR-RFS  489 (495)
T ss_dssp             CBCSSSCBCC-CCCCBEEE-CCC
T ss_pred             ccCCceecCC-CcceEEEE-Ecc
Confidence            3344555654 56 89999 854


No 17 
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A*
Probab=100.00  E-value=3.4e-71  Score=543.10  Aligned_cols=440  Identities=16%  Similarity=0.212  Sum_probs=337.0

Q ss_pred             hccCCCCCcccchhhHHHHhhccchHHHHHHHHHHHhCCeeEEeeecccCcceEEEcChhhHHHhhhcCCccccCCcccc
Q 047974           25 RKINPTPWNLPLLGMLASVILNINQLHDKVAQILEKTKGSFMIKGSWVAQYDMFLTSDPANVQHIMSTNFSKYHKGSEGR  104 (497)
Q Consensus        25 ~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~k~g~v~~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~~~~~~~~  104 (497)
                      +++||||+++|++||+.++......++.++.+++++||++|.+   ++++.++++++||+.+++|+.++...|.+++...
T Consensus        11 ~~lpPgP~~~p~~G~~~~~~~~~~~~~~~~~~l~~~yG~v~~~---~~g~~~~v~v~~~~~~~~vl~~~~~~f~~~~~~~   87 (481)
T 3czh_A           11 MGFPPGPPGLPFIGNIYSLAASSELPHVYMRKQSQVYGEIFSL---DLGGISTVVLNGYDVVKECLVHQSEIFADRPCLP   87 (481)
T ss_dssp             -CCCCCCCCBTTTBHHHHHHHCSSCHHHHHHHHHHHHCSEEEE---EETTEEEEEEESHHHHHHHHTTTTTTTCBCCCCH
T ss_pred             CCCCCCCCCCcccccHhhcCcccCcHHHHHHHHHHHhCCEEEE---EECCccEEEECCHHHHHHHHhhchHhhCCCCCcH
Confidence            4589999999999999988544222788999999999999998   8899999999999999999988756777665432


Q ss_pred             ccccccCCcCe-eecCCchHHHHHHhhhcccCHHHH--HHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHHHHHHHH
Q 047974          105 KRFDIFGETGL-FNSDFDEWKHQRKLARAFINHQKF--QQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLLKRTTFD  181 (497)
Q Consensus       105 ~~~~~~g~~~l-~~~~~~~w~~~R~~~~~~f~~~~l--~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~  181 (497)
                      ....+.+..++ +..+|+.|+++|+++.++|+...+  ..+ .+.+++. .+.+.+.+.+  ..++.+|+.+.+..++++
T Consensus        88 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~f~~~~~~~~~~-~~~i~~~-~~~l~~~l~~--~~~~~~d~~~~~~~~~~~  163 (481)
T 3czh_A           88 LFMKMTKMGGLLNSRYGRGWVDHRRLAVNSFRYFGYGQKSF-ESKILEE-TKFFNDAIET--YKGRPFDFKQLITNAVSN  163 (481)
T ss_dssp             HHHHHHTTCSSTTCCSSHHHHHHHHHHHHHHHHTTTTSTTH-HHHHHHH-HHHHHHHHHT--TTTCCBCCHHHHHHHHHH
T ss_pred             HHHhhcCCCCeEeCCCChHHHHHHHHHHHHHHHhcCChHHH-HHHHHHH-HHHHHHHHHH--cCCCCcCHHHHHHHHHHH
Confidence            22122222254 457899999999999999976543  232 3445555 4455555543  234579999999999999


Q ss_pred             HHHHhhcCCCCCCCCCCCCCCChHHHHHHHHHHH------H---HHH-------HHHHHHhHHHHHHHHHHHHHHHHHHH
Q 047974          182 FACLIATGHNPNSLSVGFPEMGFPDAVDDACEAI------L---IRH-------LEKKLANGWRTIDQFWEKQKSMKQEE  245 (497)
Q Consensus       182 v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~------~---~~~-------~~~~~~~~~~~~~~~~~~~i~~~~~~  245 (497)
                      +++.++||.+++..+.  ....+.+.+.......      .   ..+       ..++..++.+.+.+++.+.|+++++.
T Consensus       164 vi~~~~fG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~lp~~~~~~~~~~~~~~~~~~~~~i~~r~~~  241 (481)
T 3czh_A          164 ITNLIIFGERFTYEDT--DFQHMIELFSENVELAASASVFLYNAFPWIGILPFGKHQQLFRNAAVVYDFLSRLIEKASVN  241 (481)
T ss_dssp             HHHHHHHSSCCCTTCH--HHHHHHHHHHHHHHHTTSHHHHHHHHCGGGGGCSSSHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHcCCCCCCCCH--HHHHHHHHHHHHHhhhccchhHHhhhhHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999998753211  0111222222222110      0   000       13445566777888888888877653


Q ss_pred             HHhccccccccchhhHHHHHhcCCC----CCCCCCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHH
Q 047974          246 IEKGMEAKEDEGIYSLLNCYLSGHE----VTGPTPAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREEL  321 (497)
Q Consensus       246 ~~~~~~~~~~~~~~dll~~ll~~~~----~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei  321 (497)
                      .+.       ....|+++.+++...    +.+..++++++.+++..+++||+|||+++++|++++|++||++|++|++|+
T Consensus       242 ~~~-------~~~~d~l~~ll~~~~~~~~~~~~~l~~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei  314 (481)
T 3czh_A          242 RKP-------QLPQHFVDAYLDEMDQGKNDPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEI  314 (481)
T ss_dssp             CCT-------TCCSSHHHHHHHHHHHTTTCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred             cCC-------CchHHHHHHHHHHHHhcccCccccccHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhChHHHHHHHHHH
Confidence            211       234689998886521    123468999999999999999999999999999999999999999999999


Q ss_pred             HhhcccCCCCCCCCCChhhhhcchhHHHHHHHhhcCCCCCCc-ccccccCCCcccCCeeeCCCcEEEEeccccccCCCCC
Q 047974          322 KRNFSQEGFNKPPLVRLNELNKLVYLHAALCETLRLYPPVPF-EIRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVW  400 (497)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~-~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~  400 (497)
                      +++++     .++.++.+++.+||||+|||+|+||++|+++. ..|.+.+|.++ +||.|||||.|+++.+++||||++|
T Consensus       315 ~~~~~-----~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~l-~G~~Ip~Gt~V~~~~~~~~rdp~~~  388 (481)
T 3czh_A          315 DLIMG-----PNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVV-RGYSIPKGTTVITNLYSVHFDEKYW  388 (481)
T ss_dssp             HHHTC-----SSSCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEE-TTEEECTTCEEEEEHHHHHTCTTTC
T ss_pred             HHhcC-----CCCCCChhhhhhChHHHHHHHHHHhhccccccCcceeecCCeEE-eCEEcCCCCEEEechHHHhCCcccC
Confidence            99984     34678999999999999999999999999995 56877777666 9999999999999999999999999


Q ss_pred             CCCCCCCCCCCccCCCCCccCCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCccc--eeeeeEEEee
Q 047974          401 GEDCREFKPERWITEDGRIRHEPPHKFFSFNAGPRICIGKDIAFTLMKATAASIIHNYDVQVVKNHPV--TYNLSIGFRM  478 (497)
Q Consensus       401 g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~--~~~~~~~~~~  478 (497)
                       +||++|+||||+++++..  ..+..|+|||+|+|.|+|++||++|++++++.|+++|++++.++.+.  ....+.+..|
T Consensus       389 -~dP~~F~PeR~l~~~~~~--~~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~p  465 (481)
T 3czh_A          389 -RDPEVFHPERFLDSSGYF--AKKEALVPFSLGRRHCLGEHLARMEMFLFFTALLQRFHLHFPHELVPDLKPRLGMTLQP  465 (481)
T ss_dssp             -SSTTSCCGGGGBCTTSCB--CCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEECGGGCCCCCCCCSSSSCCC
T ss_pred             -CCccccCCCceeCCCCCC--cCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHheEEeCCCCCCCCcccCCCceecC
Confidence             999999999999764432  25678999999999999999999999999999999999998764322  2223444454


Q ss_pred             cCceEEEEEecC
Q 047974          479 KHGLLARVSKRS  490 (497)
Q Consensus       479 ~~~~~~~~~~r~  490 (497)
                       .++.++++||-
T Consensus       466 -~~~~~~~~~~~  476 (481)
T 3czh_A          466 -QPYLICAERRH  476 (481)
T ss_dssp             -CCCCBEEEECC
T ss_pred             -CceEEEEEecc
Confidence             57899999985


No 18 
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A*
Probab=100.00  E-value=8.5e-69  Score=523.74  Aligned_cols=414  Identities=22%  Similarity=0.371  Sum_probs=338.0

Q ss_pred             hHHHHHHHHHHHhCCeeEEeeecccCcceEEEcChhhHHHhhhcCCccccCCccccccc------cccCCcCeee-cCCc
Q 047974           49 QLHDKVAQILEKTKGSFMIKGSWVAQYDMFLTSDPANVQHIMSTNFSKYHKGSEGRKRF------DIFGETGLFN-SDFD  121 (497)
Q Consensus        49 ~~~~~~~~~~~k~g~v~~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~~~~~~~~~~~------~~~g~~~l~~-~~~~  121 (497)
                      .+|..+.+++++||+||++   ++++.+.|+++||+++++|+.+  ..+.+++......      .++|. ++++ .+|+
T Consensus        11 ~~~~~~~~~~~kyG~v~~~---~~~~~~~vvv~~p~~~~~il~~--~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~g~   84 (456)
T 3mdm_A           11 VLQDVFLDWAKKYGPVVRV---NVFHKTSVIVTSPESVKKFLMS--TKYNKDSKMYRALQTVFGERLFGQ-GLVSECNYE   84 (456)
T ss_dssp             CHHHHHHHHHHHHCSEEEE---EETTEEEEEECCHHHHHHHHTC--TTSCCCHHHHHHHHEETTEESSTT-STTTCCCHH
T ss_pred             hHHHHHHHHHHHhCCeEEE---EeCCCCEEEECCHHHHHHHHhh--ccccccchhHHHHHHhhcccccCC-CcccCCChH
Confidence            4688899999999999999   8899999999999999999975  3555554322111      23455 6665 4899


Q ss_pred             hHHHHHHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCC
Q 047974          122 EWKHQRKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLLKRTTFDFACLIATGHNPNSLSVGFPE  201 (497)
Q Consensus       122 ~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~v~~~~~fG~~~~~~~~~~~~  201 (497)
                      .|+++||+++++|+.+.++.+.+ .+.+. .+.+.+.+.+...++.++|+.+++..+++++++.++||.+++..+..  .
T Consensus        85 ~w~~~Rr~~~~~fs~~~l~~~~~-~i~~~-~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~--~  160 (456)
T 3mdm_A           85 RWHKQRRVIDLAFSRSSLVSLME-TFNEK-AEQLVEILEAKADGQTPVSMQDMLTYTAMDILAKAAFGMETSMLLGA--Q  160 (456)
T ss_dssp             HHHHHHHHHGGGGSHHHHHTTHH-HHHHH-HHHHHHHHHHTCSSSSCEEHHHHHHHHHHHHHHHHHHSCCCCGGGTC--C
T ss_pred             HHHHHHhhcccccCHHHHHHHHH-HHHHH-HHHHHHHHHHhcCCCCeeeHHHHHHHHHHHHHHHHHcCCChhhhccc--c
Confidence            99999999999999999988754 45555 56677777665556678999999999999999999999998765432  2


Q ss_pred             CChHHHHHHHHHHHHH------HH------HHHHHHhHHHHHHHHHHHHHHHHHHHHHhccccccccchhhHHHHHhcCC
Q 047974          202 MGFPDAVDDACEAILI------RH------LEKKLANGWRTIDQFWEKQKSMKQEEIEKGMEAKEDEGIYSLLNCYLSGH  269 (497)
Q Consensus       202 ~~~~~~~~~~~~~~~~------~~------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~dll~~ll~~~  269 (497)
                      ..+.+.+.........      .+      ..+...++.+.+.+++.+.++++++....+.     ....|+++.+++..
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~-----~~~~d~l~~ll~~~  235 (456)
T 3mdm_A          161 KPLSQAVKLMLEGITASRNTLAKFLPGKRKQLREVRESIRFLRQVGRDWVQRRREALKRGE-----EVPADILTQILKAE  235 (456)
T ss_dssp             HHHHHHHHHHHHHHHHHHHSCGGGCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-----CCCCCHHHHHHHHT
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc-----cchhhHHHHHHHhc
Confidence            2344444333322111      11      1233455667777888888888877654331     23568999999875


Q ss_pred             CCCCCCCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhhcccCCCCCCCCCChhhhhcchhHHH
Q 047974          270 EVTGPTPAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRNFSQEGFNKPPLVRLNELNKLVYLHA  349 (497)
Q Consensus       270 ~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~l~~lp~l~a  349 (497)
                      +   ..++++++.++++.+++||+|||+++++|++++|++||++|+++++|++++++     .+..++.+++.+||||+|
T Consensus       236 ~---~~~~~~~l~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~-----~~~~~~~~~l~~lpyl~a  307 (456)
T 3mdm_A          236 E---GAQDDEGLLDNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIG-----SKRYLDFEDLGRLQYLSQ  307 (456)
T ss_dssp             S---SCSSSHHHHHHHHHHHHHTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTT-----TCSSCCHHHHHHCHHHHH
T ss_pred             C---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHcC-----CCCCCCHHHHhcCHHHHH
Confidence            3   34789999999999999999999999999999999999999999999999984     456789999999999999


Q ss_pred             HHHHhhcCCCCCCcccccccCCCcccCCeeeCCCcEEEEeccccccCCCCCCCCCCCCCCCCccCCCCCccCCCCCcccc
Q 047974          350 ALCETLRLYPPVPFEIRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWGEDCREFKPERWITEDGRIRHEPPHKFFS  429 (497)
Q Consensus       350 ~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~  429 (497)
                      ||+|+||++|+++...|++.+|.++ +||.|||||.|+++.+++||||++| +||++|+||||++.+.    .+...|+|
T Consensus       308 ~i~E~lRl~p~~~~~~r~~~~d~~i-~g~~Ip~Gt~v~~~~~~~~~d~~~~-~dp~~F~PeRfl~~~~----~~~~~~~p  381 (456)
T 3mdm_A          308 VLKESLRLYPPAWGTFRLLEEETLI-DGVRVPGNTPLLFSTYVMGRMDTYF-EDPLTFNPDRFGPGAP----KPRFTYFP  381 (456)
T ss_dssp             HHHHHHHHCCSSCCEEEEECSCEEE-TTEEECSSEEEEECHHHHHTCTTTS-SSTTSCCGGGGSTTSC----CCSSSCCT
T ss_pred             HHHHHHHhCCCccccccccCCceeE-CCEEECCCCEEEeehHHhcCCchhc-CCccccCccccCCCCC----CCCCcccC
Confidence            9999999999999888888777666 9999999999999999999999999 9999999999997632    24568999


Q ss_pred             cCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCccceeeeeEEEeecCceEEEEEecCC
Q 047974          430 FNAGPRICIGKDIAFTLMKATAASIIHNYDVQVVKNHPVTYNLSIGFRMKHGLLARVSKRSA  491 (497)
Q Consensus       430 Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  491 (497)
                      ||+|+|.|+|++||++|++++++.|+++|++++.++.+.......+..|+++++|++++|..
T Consensus       382 Fg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~r~~  443 (456)
T 3mdm_A          382 FSLGHRSCIGQQFAQMEVKVVMAKLLQRLEFRLVPGQRFGLQEQATLKPLDPVLCTLRPRGW  443 (456)
T ss_dssp             TCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEEECTTCCCCEEESSSEEESSCCEEEEEECCC
T ss_pred             CCCCCcCCCCHHHHHHHHHHHHHHHHHhCeEEeCCCCcceeecceEEecCCCeEEEEEEcCC
Confidence            99999999999999999999999999999999988766656666788899999999999974


No 19 
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A*
Probab=100.00  E-value=6.7e-70  Score=531.13  Aligned_cols=429  Identities=16%  Similarity=0.218  Sum_probs=345.3

Q ss_pred             hccCCCCCc-ccchhhHHHHhhccchHHHHHHHHHHHhC-CeeEEeeecccCcceEEEcChhhHHHhhhcCCccccCCcc
Q 047974           25 RKINPTPWN-LPLLGMLASVILNINQLHDKVAQILEKTK-GSFMIKGSWVAQYDMFLTSDPANVQHIMSTNFSKYHKGSE  102 (497)
Q Consensus        25 ~~~ppgp~~-~P~~G~~~~~~~~~~~~~~~~~~~~~k~g-~v~~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~~~~~~  102 (497)
                      .++||||++ +|++||++++..+   ++.++.+++++|| ++|++   ++++.++++++||+++++++.++...+.+++.
T Consensus         2 ~~~PPg~p~~~P~iG~~~~~~~~---~~~~~~~~~~~yG~~i~~~---~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~   75 (450)
T 3gw9_A            2 GKLPPVYPVTVPILGHIIQFGKS---PLGFMQECKRQLKSGIFTI---NIVGKRVTIVGDPHEHSRFFLPRNEVLSPREV   75 (450)
T ss_dssp             CSCCCBCCCCSTTTBTHHHHHHC---HHHHHHHHHHHHTCSEEEE---EETTEEEEEECCGGGTHHHHSSCTTTEESTGG
T ss_pred             CCCCCCCCCCcchhccHHHHccC---HHHHHHHHHHHhCCCeEEE---EECCEeEEEEeCHHHHHHHHhCChhhccchhh
Confidence            358998665 9999999999654   7888999999999 99999   89999999999999999999887677777766


Q ss_pred             ccccccccCCcCeee-cCCchHHHHHHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHHHHHHHH
Q 047974          103 GRKRFDIFGETGLFN-SDFDEWKHQRKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLLKRTTFD  181 (497)
Q Consensus       103 ~~~~~~~~g~~~l~~-~~~~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~  181 (497)
                      +.....++|. +++. .+++.|+++|+++.++|+.+.++.+.+ .+.+.+.+.+.+.+.+   .++.+|+.+++..++++
T Consensus        76 ~~~~~~~~g~-~~~~~~~~~~~~~~R~~~~~~f~~~~l~~~~~-~i~~~~~~ll~~~~~~---~~~~vd~~~~~~~~~~~  150 (450)
T 3gw9_A           76 YSFMVPVFGE-GVAYAAPYPRMREQLNFLAEELTIAKFQNFVP-AIQHEVRKFMAANWDK---DEGEINLLEDCSTMIIN  150 (450)
T ss_dssp             GGGGHHHHCT-TSGGGSCHHHHHHHHHHHHHTTSGGGCTTHHH-HHHHHHHHHHHHHSCS---SEEEEEHHHHHHHHHHH
T ss_pred             HHHHHHHhcC-CcccCCCcHHHHHHHHHHHHHHhHHHHHHHHH-HHHHHHHHHHHHHhcc---CCCcccHHHHHHHHHHH
Confidence            5544456677 6654 579999999999999999999988754 4555533333224432   34689999999999999


Q ss_pred             HHHHhhcCCCCCCCCCCCCCCChHHHHHHHHHH--------HHHHH----HHHHHHhHHHHHHHHHHHHHHHHHHHHHhc
Q 047974          182 FACLIATGHNPNSLSVGFPEMGFPDAVDDACEA--------ILIRH----LEKKLANGWRTIDQFWEKQKSMKQEEIEKG  249 (497)
Q Consensus       182 v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~----~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  249 (497)
                      +++.++||.+++...+   ...+.+.+..+...        +++++    ..++..++.+.+.+++.+.++++++.....
T Consensus       151 ~i~~~~fG~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~P~l~~lp~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~  227 (450)
T 3gw9_A          151 TACQCLFGEDLRKRLD---ARRFAQLLAKMESSLIPAAVFLPILLKLPLPQSARCHEARTELQKILSEIIIARKEEEVNK  227 (450)
T ss_dssp             HHHHHHSCHHHHHHSC---HHHHHHHHHHHHHTCCGGGGTCGGGGGSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHcCcchhhhhh---hHHHHHHHHHHHhccccchhcccchhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence            9999999987643211   12233333322111        00111    134566778889999999998887644221


Q ss_pred             cccccccchhhHHHHHhcCCCCCCCCCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHh--cChHHHHHHHHHHHhhccc
Q 047974          250 MEAKEDEGIYSLLNCYLSGHEVTGPTPAEKVMRDNITALIFATEGTTSIALTWFFWLVS--KNPFAETKIREELKRNFSQ  327 (497)
Q Consensus       250 ~~~~~~~~~~dll~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~--~~p~~~~~l~~Ei~~~~~~  327 (497)
                           +....|+++.+++...+++..++++++.++++.+++||+|||+.+++|++++|+  .||++|+++++|++++   
T Consensus       228 -----~~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~~~p~~~~~l~~Ei~~~---  299 (450)
T 3gw9_A          228 -----DSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEF---  299 (450)
T ss_dssp             -----SCCCCSHHHHHHHCBCTTSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSGGGHHHHHHHHHHHTTC---
T ss_pred             -----CCccchHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHcCCcchhHHHHHHHHHHhc---
Confidence                 134579999999987655667999999999999999999999999999999999  9999999999999987   


Q ss_pred             CCCCCCCCCChhhh-hcchhHHHHHHHhhcCCCCCCcccccccCCCcccCCeeeCCCcEEEEeccccccCCCCCCCCCCC
Q 047974          328 EGFNKPPLVRLNEL-NKLVYLHAALCETLRLYPPVPFEIRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWGEDCRE  406 (497)
Q Consensus       328 ~~~~~~~~~~~~~l-~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~  406 (497)
                           +..++.+++ .+||||+|||+|+||++|+++...|.+.+|.++ +||.|||||.|+++.+++||||++| +||++
T Consensus       300 -----~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~~-~g~~ip~Gt~v~~~~~~~~~d~~~~-~dp~~  372 (450)
T 3gw9_A          300 -----PAQLNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKV-GSYVVPKGDIIACSPLLSHHDEEAF-PEPRR  372 (450)
T ss_dssp             -----CSSCCHHHHHHHCHHHHHHHHHHHHHSCSCCCEEEEECSCEEE-TTEEECTTCEEEECHHHHTTCTTTS-SSTTS
T ss_pred             -----cCCCChHHHHHhcHHHHHHHHHHHHhCCchhcccccccccccc-CCEEECCCCEEEEChHHhhCChhhc-CCccc
Confidence                 245789999 999999999999999999999888888887777 9999999999999999999999999 99999


Q ss_pred             CCCCCccCCCCCccCCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCccce-eeeeEEEeec-CceEE
Q 047974          407 FKPERWITEDGRIRHEPPHKFFSFNAGPRICIGKDIAFTLMKATAASIIHNYDVQVVKNHPVT-YNLSIGFRMK-HGLLA  484 (497)
Q Consensus       407 F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~-~~~~~~~~~~-~~~~~  484 (497)
                      |+|||+..        .+..|+|||+|+|.|+|++||++|++++++.|+++|++++.++.... .....+..|+ .+++|
T Consensus       373 F~PeR~~~--------~~~~~~~Fg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~v  444 (450)
T 3gw9_A          373 WDPERDEK--------VEGAFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRDEVPDPDYHTMVVGPTASQCRV  444 (450)
T ss_dssp             CCTTCCCS--------STTCCCTTCCGGGCCSSHHHHHHHHHHHHHHHHHHEEEEESSSSCCCEETTSSSCEECGGGCEE
T ss_pred             cCCCcCcC--------CCCceeCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEecCCCCCCCccccceecCCCCceEe
Confidence            99999321        35689999999999999999999999999999999999998543222 2234566777 78999


Q ss_pred             EEEecC
Q 047974          485 RVSKRS  490 (497)
Q Consensus       485 ~~~~r~  490 (497)
                      ++++|+
T Consensus       445 ~~~~R~  450 (450)
T 3gw9_A          445 KYIRRK  450 (450)
T ss_dssp             EEEECC
T ss_pred             EeeecC
Confidence            999985


No 20 
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A*
Probab=100.00  E-value=1.2e-70  Score=537.84  Aligned_cols=426  Identities=17%  Similarity=0.248  Sum_probs=315.8

Q ss_pred             hccCCCCCcccchhhHHHHhhccchHHHHHHHHHHHhCCeeEEeeecccCcceEEEcChhhHHHhhhcCCccc-cCCccc
Q 047974           25 RKINPTPWNLPLLGMLASVILNINQLHDKVAQILEKTKGSFMIKGSWVAQYDMFLTSDPANVQHIMSTNFSKY-HKGSEG  103 (497)
Q Consensus        25 ~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~k~g~v~~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~-~~~~~~  103 (497)
                      +..||||+++|++||++++..+   ++.++.++++ ||+||++   ++++.++++|+||+.+++++.++  .| .+++.+
T Consensus        22 ~eppPgP~~~P~iG~~~~~~~~---p~~~~~~l~~-yGpv~~~---~~g~~~~~vv~~~~~i~~il~~~--~~~~~~~~~   92 (467)
T 3dbg_A           22 REPPVAGGGVPLLGHGWRLARD---PLAFMSQLRD-HGDVVRI---KLGPKTVYAVTNPELTGALALNP--DYHIAGPLW   92 (467)
T ss_dssp             CBCCEECCCCSTTHHHHHHHHC---HHHHHHHHGG-GCSEEEE---EETTEEEEEECSHHHHHHHHHCT--TC-------
T ss_pred             CCCCCCCCCCCcccchHHhccC---HHHHHHHHHH-hCCEEEE---EeCCccEEEECCHHHHHHHHhCc--CcccccchH
Confidence            4468899999999999999765   6778888877 9999999   88999999999999999999876  55 444444


Q ss_pred             cccccccCCcCeeecCCchHHHHHHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHHHHHHHHHH
Q 047974          104 RKRFDIFGETGLFNSDFDEWKHQRKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLLKRTTFDFA  183 (497)
Q Consensus       104 ~~~~~~~g~~~l~~~~~~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~v~  183 (497)
                      .......|..+++..+|+.|+++|++++++|+.+.++.+. +.+++. .+.+.+.+.    .++.+|+.+.+..++++++
T Consensus        93 ~~~~~~~g~~~l~~~dg~~h~~~R~~l~~~fs~~~l~~~~-~~i~~~-~~~l~~~l~----~~~~~d~~~~~~~~~~~vi  166 (467)
T 3dbg_A           93 ESLEGLLGKEGVATANGPLHRRQRRTIQPAFRLDAIPAYG-PIMEEE-AHALTERWQ----PGKTVDATSESFRVAVRVA  166 (467)
T ss_dssp             -----------------------CGGGHHHHSTTTSTTTH-HHHHHH-HHHHHHHSC----TTSCEEHHHHHHHHHHHHH
T ss_pred             HHHHHhcCCCCcccCCcHHHHHHHHHhhhhhCHHHHHHHH-HHHHHH-HHHHHHHhc----cCCcCcHHHHHHHHHHHHH
Confidence            3333556733888999999999999999999999988764 345555 344444443    2568999999999999999


Q ss_pred             HHhhcCCCCCCCCCCCCCCChHHHHHHHHHHHH---------HHHH----HHHHHhHHHHHHHHHHHHHHHHHHHHHhcc
Q 047974          184 CLIATGHNPNSLSVGFPEMGFPDAVDDACEAIL---------IRHL----EKKLANGWRTIDQFWEKQKSMKQEEIEKGM  250 (497)
Q Consensus       184 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~----~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  250 (497)
                      +.++||.+++..    ....+.+.+..+.....         ..++    .+...++.+.+.+++.+.++++++..    
T Consensus       167 ~~~~~g~~~~~~----~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~----  238 (467)
T 3dbg_A          167 ARCLLRGQYMDE----RAERLCVALATVFRGMYRRMVVPLGPLYRLPLPANRRFNDALADLHLLVDEIIAERRASG----  238 (467)
T ss_dssp             HHHHSCSSCCHH----HHHHHHHHHHHHHHC------------------------CCHHHHHHHHHHHHHHHTTCC----
T ss_pred             HHHHhCCcccch----hHHHHHHHHHHHHHHHHHHhccchhhhhhCCChHhHHHHHHHHHHHHHHHHHHHHHHhcC----
Confidence            999999877531    01122222222221110         0111    23455667788888888887775421    


Q ss_pred             ccccccchhhHHHHHhcCCCCCCCCCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhhcccCCC
Q 047974          251 EAKEDEGIYSLLNCYLSGHEVTGPTPAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRNFSQEGF  330 (497)
Q Consensus       251 ~~~~~~~~~dll~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~  330 (497)
                           ....|+++.+++..++++..++++++.++++.+++||+|||+.+++|++++|++||++|++|++|++++++    
T Consensus       239 -----~~~~dll~~ll~~~~~~~~~ls~~ei~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~----  309 (467)
T 3dbg_A          239 -----QKPDDLLTALLEAKDDNGDPIGEQEIHDQVVAILTPGSETIASTIMWLLQALADHPEHADRIRDEVEAVTG----  309 (467)
T ss_dssp             -----SSCCSHHHHHTTC--------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHT----
T ss_pred             -----CCchHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhC----
Confidence                 34579999999886655556999999999999999999999999999999999999999999999999984    


Q ss_pred             CCCCCCChhhhhcchhHHHHHHHhhcCCCCCCcccccccCCCcccCCeeeCCCcEEEEeccccccCCCCCCCCCCCCCCC
Q 047974          331 NKPPLVRLNELNKLVYLHAALCETLRLYPPVPFEIRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWGEDCREFKPE  410 (497)
Q Consensus       331 ~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~  410 (497)
                        +..++.+++++||||+|||+|+||++|+++...|.+.+|.++ +||.|||||.|+++.+++||||++| +||++|||+
T Consensus       310 --~~~~~~~~l~~l~yl~a~i~E~lRl~p~~~~~~R~~~~d~~l-~g~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~Pe  385 (467)
T 3dbg_A          310 --GRPVAFEDVRKLRHTGNVIVEAMRLRPAVWVLTRRAVAESEL-GGYRIPAGADIIYSPYAIQRDPKSY-DDNLEFDPD  385 (467)
T ss_dssp             --TSCCCHHHHTTCHHHHHHHHHHHHHSCSCCCEEEECSSCEEE-TTEEECTTCEEEECHHHHHTCTTTC-TTTTCCCGG
T ss_pred             --CCCCCHHHHhhCHHHHHHHHHHhhcCCCccccceeeCCCccC-CCEEECCCCEEEEChHHhcCCchhc-CCccccCCc
Confidence              257899999999999999999999999999888888887776 9999999999999999999999999 999999999


Q ss_pred             CccCCCCCccCCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCccceeeeeEEEeecCceEEEEEec
Q 047974          411 RWITEDGRIRHEPPHKFFSFNAGPRICIGKDIAFTLMKATAASIIHNYDVQVVKNHPVTYNLSIGFRMKHGLLARVSKR  489 (497)
Q Consensus       411 Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  489 (497)
                      ||++.++.  ......|+|||+|+|.|+|++||++|++++++.|+++|++++.++.+.....+.+++|+ +++++=..|
T Consensus       386 Rfl~~~~~--~~~~~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~p~-~l~~~~~~~  461 (467)
T 3dbg_A          386 RWLPERAA--NVPKYAMKPFSAGKRKCPSDHFSMAQLTLITAALATKYRFEQVAGSNDAVRVGITLRPH-DLLVRPVAR  461 (467)
T ss_dssp             GGSHHHHT--TSCTTSCCSSCSSSSSCTTHHHHHHHHHHHHHHHHHHEEEEECTTCEEEEEESSSEEEE-ECEEEEEEC
T ss_pred             cCCCCccc--cCCCccccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceeEeCCCCCCccceeeEecCC-CCccchhhh
Confidence            99975432  12467899999999999999999999999999999999999998776666677777775 566655444


No 21 
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus}
Probab=100.00  E-value=4e-71  Score=546.29  Aligned_cols=430  Identities=16%  Similarity=0.264  Sum_probs=325.9

Q ss_pred             ccCCCCCcccchhhHHHHhhccchHHHHHHHHHHHhCCeeEEeeecccCcceEEEcChhhHHHhhhcCCccccCCccccc
Q 047974           26 KINPTPWNLPLLGMLASVILNINQLHDKVAQILEKTKGSFMIKGSWVAQYDMFLTSDPANVQHIMSTNFSKYHKGSEGRK  105 (497)
Q Consensus        26 ~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~k~g~v~~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~~~~~~~~~  105 (497)
                      ++||||++      ++++.  .++++.++.+++++||++|++   ++|+.++++|+||+++++++.++...|.+++....
T Consensus        29 ~lPPGP~~------l~~~~--~~~~~~~~~~l~~~yG~v~~~---~~g~~~~vvv~~~~~~~~il~~~~~~f~~r~~~~~   97 (496)
T 3qz1_A           29 HLPPLVPG------FLHLL--QPNLPIHLLSLTQKLGPVYRL---RLGLQEVVVLNSKRTIEEAMIRKWVDFAGRPQIPS   97 (496)
T ss_dssp             CCCCBCSC------SCTTS--SSCHHHHHHHGGGTSCSEEEE---CSSSSCEEEECSTTHHHHTTTTSCSTTCBCCCCTT
T ss_pred             CCCcCCcc------ccccC--CCcchHHHHHHHHHhCCEEEE---EeCCcCEEEECCHHHHHHHHHhCcHhhCCCCCcch
Confidence            48899887      22221  245788999999999999999   99999999999999999999887677877765543


Q ss_pred             cccc-cCCcCeeecC-CchHHHHHHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHHHHHHHHHH
Q 047974          106 RFDI-FGETGLFNSD-FDEWKHQRKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLLKRTTFDFA  183 (497)
Q Consensus       106 ~~~~-~g~~~l~~~~-~~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~v~  183 (497)
                      .... .|..++++++ |+.|+++||++.++|+.+.++.+ .+.+.+. .+.+.+.+.+  ..++++|+.+++..++++++
T Consensus        98 ~~~~~~~~~~l~~~~~g~~w~~~Rr~~~~~f~~~~~~~~-~~~i~~~-~~~l~~~l~~--~~~~~vd~~~~~~~~~~dvi  173 (496)
T 3qz1_A           98 YKLVSQRCQDISLGDYSLLWKAHKKLTRSALLLGTRSSM-EPWVDQL-TQEFCERMRV--QAGAPVTIQKEFSLLTCSII  173 (496)
T ss_dssp             TTTSCTTCCCSSSSCCSHHHHHHHHHHHHHHHC--CCCH-HHHHHHH-HHHHHHHHHT--TCSCCCHHHHHHTHHHHHHT
T ss_pred             HHHhcCCCCceEECCCCHHHHHHHHHHHHHHhhccHhhH-HHHHHHH-HHHHHHHHHh--cCCCccCHHHHHHHHHHHHH
Confidence            3322 2333788888 99999999999999986555444 3445555 4555566654  34578999999999999999


Q ss_pred             HHhhcCCCCCCCCCCCCCCChHHHHHHHHH------H------HHHH----HHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Q 047974          184 CLIATGHNPNSLSVGFPEMGFPDAVDDACE------A------ILIR----HLEKKLANGWRTIDQFWEKQKSMKQEEIE  247 (497)
Q Consensus       184 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~------~------~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  247 (497)
                      +.++||. .+  +  .....+.+.+.....      .      ++++    ...+...++.+.+.+++.+.++++++..+
T Consensus       174 ~~~~fG~-~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~lp~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  248 (496)
T 3qz1_A          174 CYLTFGN-KE--D--TLVHAFHDCVQDLMKTWDHWSIQILDMVPFLRFFPNPGLWRLKQAIENRDHMVEKQLRRHKESMV  248 (496)
T ss_dssp             TTTSTTC-CC--H--HHHHHHHHHHHTTTTTTSSHHHHHHHHCGGGCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred             HHHhcCC-CC--C--hHHHHHHHHHHHHHHHhccchhHHHHhHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence            9999998 11  0  000111222211110      0      0000    11345667778888888888888766432


Q ss_pred             hccccccccchhhHHHHHhcCCCCC----C-CCCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHH
Q 047974          248 KGMEAKEDEGIYSLLNCYLSGHEVT----G-PTPAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELK  322 (497)
Q Consensus       248 ~~~~~~~~~~~~dll~~ll~~~~~~----~-~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~  322 (497)
                      .       ....|+++.+++...+.    + ..++++++.+++..+++||+|||+++++|++++|++||++|+|+++|++
T Consensus       249 ~-------~~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~  321 (496)
T 3qz1_A          249 A-------GQWRDMTDYMLQGVGRQRVEEGPGQLLEGHVHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEELD  321 (496)
T ss_dssp             S-------SCCSSSHHHHTTSSTTCCC-----CCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred             C-------CCccchHHHHHHHHHhccccCCcccccHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence            1       23568999999875421    1 2689999999999999999999999999999999999999999999999


Q ss_pred             hhcccCCCCCCCCCChhhhhcchhHHHHHHHhhcCCCCCCcc-cccccCCCcccCCeeeCCCcEEEEeccccccCCCCCC
Q 047974          323 RNFSQEGFNKPPLVRLNELNKLVYLHAALCETLRLYPPVPFE-IRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWG  401 (497)
Q Consensus       323 ~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~-~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g  401 (497)
                      ++++.+. ..+..+ .+++++||||+|||+|+||++|+++.. .|.+.+|.++ +||.|||||.|+++.+++||||++| 
T Consensus       322 ~~~~~~~-~~~~~~-~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~-~g~~ip~Gt~v~~~~~~~~~d~~~~-  397 (496)
T 3qz1_A          322 RELGPGA-SCSRVT-YKDRARLPLLNATIAEVLRLRPVVPLALPHRTTRPSSI-FGYDIPEGMVVIPNLQGAHLDETVW-  397 (496)
T ss_dssp             HHHCSSS-SSSCCS-TTGGGSCHHHHHHHHHHHHHSCSSSSCCCEECSSCEEC-SSSEECTTCEEEECHHHHTTCTTTS-
T ss_pred             HHhCCCc-ccCCCC-hhhhhcCcHHHHHHHHHHHhcCCcccccCccCCCCceE-CCEEeCCCCEEEechHHhhCChhhc-
Confidence            9996421 114456 899999999999999999999999974 5777776555 9999999999999999999999999 


Q ss_pred             CCCCCCCCCCccCCCCCccCCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCc---cceee--eeEEE
Q 047974          402 EDCREFKPERWITEDGRIRHEPPHKFFSFNAGPRICIGKDIAFTLMKATAASIIHNYDVQVVKNH---PVTYN--LSIGF  476 (497)
Q Consensus       402 ~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~---~~~~~--~~~~~  476 (497)
                      +||++|+||||++++      ....|+|||+|+|.|+|++||++|++++++.|+++|++++.++.   +....  .+.+.
T Consensus       398 ~dp~~F~PeR~l~~~------~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~  471 (496)
T 3qz1_A          398 EQPHEFRPDRFLEPG------ANPSALAFGCGARVCLGESLARLELFVVLARLLQAFTLLPPPVGALPSLQPDPYCGVNL  471 (496)
T ss_dssp             SSTTSCCCCCCC---------CCCCCCSSCCSSSSCSSHHHHHHHHHHHHHHHHHHCCCCCCTTCCCCCSCCSCCCSSCC
T ss_pred             CCcccCCcccccCCC------CCcCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhcEEeCCCCCCCCCCCcccCcceEe
Confidence            999999999999753      12389999999999999999999999999999999999998542   12222  34455


Q ss_pred             eecCceEEEEEecCCCC
Q 047974          477 RMKHGLLARVSKRSAQP  493 (497)
Q Consensus       477 ~~~~~~~~~~~~r~~~~  493 (497)
                      .| .+++|++++|+.++
T Consensus       472 ~~-~~~~v~~~~R~~~~  487 (496)
T 3qz1_A          472 KV-QPFQVRLQPRGVEA  487 (496)
T ss_dssp             CC-CCCCCCCCCC----
T ss_pred             cC-CceEEEEEEecccc
Confidence            55 58999999998643


No 22 
>3i3k_A Lanosterol 14-alpha demethylase; cytochrome P450, hemeprotein, alternative splicing, cholesterol biosynthesis, endoplasmic reticulum, heme, iron; HET: HEM KLN BCD; 2.80A {Homo sapiens} PDB: 3jus_A* 3juv_A* 3ld6_A*
Probab=100.00  E-value=4.7e-70  Score=533.13  Aligned_cols=427  Identities=16%  Similarity=0.242  Sum_probs=339.1

Q ss_pred             hccCCC-CCcccchhhHHHHhhccchHHHHHHHHHHHhCCeeEEeeecccCcceEEEcChhhHHHhhhcCCccccCCccc
Q 047974           25 RKINPT-PWNLPLLGMLASVILNINQLHDKVAQILEKTKGSFMIKGSWVAQYDMFLTSDPANVQHIMSTNFSKYHKGSEG  103 (497)
Q Consensus        25 ~~~ppg-p~~~P~~G~~~~~~~~~~~~~~~~~~~~~k~g~v~~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~~~~~~~  103 (497)
                      .++||| |+++|++||++++..+   ++.++.+++++||+||++   ++++.+.++|++++.+++++.++...+.+++.+
T Consensus        10 ~~~PPg~P~~lP~iG~l~~~~~~---~~~~~~~~~~~yG~v~~l---~l~g~~~vvv~~~~~~~~il~~~~~~~~~~~~~   83 (461)
T 3i3k_A           10 VKSPPYIFSPIPFLGHAIAFGKS---PIEFLENAYEKYGPVFSF---TMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVY   83 (461)
T ss_dssp             CCCCCBCCCSSTTTBTHHHHHHC---HHHHHHHHHHHHCSEEEE---EETTEEEEEECSHHHHHHHHHCCTTTEESHHHH
T ss_pred             CCCCCCCCCCCCccccHHhhccC---HHHHHHHHHHHhCCEEEE---EecCceEEEEeChHHHHHHHhccccccccchHH
Confidence            348998 8899999999999654   788999999999999999   999999999999999999998875566665444


Q ss_pred             cccc-cccCCcCeeec-CCchHHHHHHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHHHHHHHH
Q 047974          104 RKRF-DIFGETGLFNS-DFDEWKHQRKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLLKRTTFD  181 (497)
Q Consensus       104 ~~~~-~~~g~~~l~~~-~~~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~  181 (497)
                      .... .++|. +++.. +++.|+++||++.+.|+...++.+.+ .+.++ .+.+.+.+.    ++..+|+.+.+..++++
T Consensus        84 ~~~~~~~~g~-g~~~~~~g~~w~~~Rr~~~~~f~~~~l~~~~~-~~~~~-~~~ll~~l~----~~~~~dl~~~~~~~~~~  156 (461)
T 3i3k_A           84 SRLTTPVFGK-GVAYDVPNPVFLEQKKMLKSGLNIAHFKQHVS-IIEKE-TKEYFESWG----ESGEKNVFEALSELIIL  156 (461)
T ss_dssp             HHHHHHHHCT-TSGGGSCHHHHHHHHHHHHHHSSHHHHHHHHH-HHHHH-HHHHGGGGC----SEEEEEHHHHHHHHHHH
T ss_pred             HHhhhhhcCC-eeeeCCCcHHHHHHHHHHhhhhCHHHHHHHHH-HHHHH-HHHHHHHhh----hcCCcCHHHHHHHHHHH
Confidence            4333 55677 76654 68999999999999999999988754 45454 333444332    23468999999999999


Q ss_pred             HHHHhhcCCCCCCCCCCCCCCChHHHHHHHHHH----HH--HHH----HHHHHHhHHHHHHHHHHHHHHHHHHHHHhccc
Q 047974          182 FACLIATGHNPNSLSVGFPEMGFPDAVDDACEA----IL--IRH----LEKKLANGWRTIDQFWEKQKSMKQEEIEKGME  251 (497)
Q Consensus       182 v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~----~~--~~~----~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  251 (497)
                      +++.++||.++....    ...+.+.+..+...    ..  ..+    ..++..++.+.+.+++.+.++++++..     
T Consensus       157 ~~~~~~~G~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~P~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-----  227 (461)
T 3i3k_A          157 TASHCLHGKEIRSQL----NEKVAQLYADLDGGFSHAAWLLPGWLPLPSFRRRDRAHREIKDIFYKAIQKRRQSQ-----  227 (461)
T ss_dssp             HHHHHHTCHHHHHTC----CHHHHHHHHHHHTTSSHHHHHSCTTSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCC-----
T ss_pred             HHHHHHccHhhhhHH----HHHHHHHHHHHHhccccchhhcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----
Confidence            999999997653221    11222222222110    00  001    134556677788888888887765421     


Q ss_pred             cccccchhhHHHHHhcCCCCCCCCCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhhcccCCCC
Q 047974          252 AKEDEGIYSLLNCYLSGHEVTGPTPAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRNFSQEGFN  331 (497)
Q Consensus       252 ~~~~~~~~dll~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~  331 (497)
                          ....|+++.+++...+++..++++++..+++.+++||+|||+.+++|++++|++||++|+++++|++++++.    
T Consensus       228 ----~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~l~~ag~~Tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~----  299 (461)
T 3i3k_A          228 ----EKIDDILQTLLDATYKDGRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGE----  299 (461)
T ss_dssp             ----CCCCSHHHHHHTCBCTTSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCT----
T ss_pred             ----cccccHHHHHHHhhhccCCCCCHHHHHHHHHHHHhhccHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcC----
Confidence                345799999998876566679999999999999999999999999999999999999999999999999962    


Q ss_pred             CCCCCChhhhhcchhHHHHHHHhhcCCCCCCcccccccCCCcccCCeeeCCCcEEEEeccccccCCCCCCCCCCCCCCCC
Q 047974          332 KPPLVRLNELNKLVYLHAALCETLRLYPPVPFEIRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWGEDCREFKPER  411 (497)
Q Consensus       332 ~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~R  411 (497)
                      ....++.+++.+||||+|||+|+||++|+++...|.+.+|.++ +||.|||||.|+++.+++|+||++| +||++|+|||
T Consensus       300 ~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~r~~~~d~~~-~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F~P~R  377 (461)
T 3i3k_A          300 NLPPLTYDQLKDLNLLDRCIKETLRLRPPIMIMMRMARTPQTV-AGYTIPPGHQVCVSPTVNQRLKDSW-VERLDFNPDR  377 (461)
T ss_dssp             TCCCCCHHHHHTCHHHHHHHHHHHHHSCSCCCEEEEECSCEEE-TTEEECTTCEEEECHHHHTTCTTTC-TTTTCCCGGG
T ss_pred             CCCCCCHHHHhcChHHHHHHHHHHhcCCCccccccccCCCccC-CCEEECCCCEEEEChHHhcCCcccC-CCcccCCCCC
Confidence            3356799999999999999999999999998888888888777 9999999999999999999999999 9999999999


Q ss_pred             ccCCCCCccCCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCcccee-eeeEEEeecCceEEE
Q 047974          412 WITEDGRIRHEPPHKFFSFNAGPRICIGKDIAFTLMKATAASIIHNYDVQVVKNHPVTY-NLSIGFRMKHGLLAR  485 (497)
Q Consensus       412 fl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~-~~~~~~~~~~~~~~~  485 (497)
                      |++.++..  ..+..|+|||+|+|.|+|++||++|++++++.|+++|++++.++..... ....+..|.+++.++
T Consensus       378 fl~~~~~~--~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~  450 (461)
T 3i3k_A          378 YLQDNPAS--GEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLIDGYFPTVNYTTMIHTPENPVIRY  450 (461)
T ss_dssp             GGSCCHHH--HSSSSSCTTCCGGGCCSCHHHHHHHHHHHHHHHHHHEEEECSTTCCCCBCCSSSSCCBSSCEEEE
T ss_pred             CCCCCCCC--CCCcceeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeEEeCCCCCCCcccceeecCCCCceEEe
Confidence            99764321  1456899999999999999999999999999999999999987653322 233345666655554


No 23 
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A*
Probab=100.00  E-value=5e-66  Score=508.56  Aligned_cols=439  Identities=15%  Similarity=0.181  Sum_probs=329.0

Q ss_pred             hccCCCCCc-ccchhhHHHHhhccchHHHHHHHHHHHhCCeeEEeeecccCcceEEEcChhhHHHhhhcCCccccCCccc
Q 047974           25 RKINPTPWN-LPLLGMLASVILNINQLHDKVAQILEKTKGSFMIKGSWVAQYDMFLTSDPANVQHIMSTNFSKYHKGSEG  103 (497)
Q Consensus        25 ~~~ppgp~~-~P~~G~~~~~~~~~~~~~~~~~~~~~k~g~v~~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~~~~~~~  103 (497)
                      .++||||++ +|++||++++..+   ++.++.+++++||+||++   ++++.++++|+||++++++++++ ..+......
T Consensus        12 ~~~PPgp~~~lPliG~~~~~~~~---p~~~~~~l~~~yGpv~~~---~lg~~~~vvv~~p~~v~~vl~~~-~~~~~~~~~   84 (491)
T 3v8d_A           12 TGEPPLENGLIPYLGCALQFGAN---PLEFLRANQRKHGHVFTC---KLMGKYVHFITNPLSYHKVLCHG-KYFDWKKFH   84 (491)
T ss_dssp             TTSCCEEEEEESSTTTTGGGTCC---HHHHHHHHHHHHCSEEEE---EETTEEEEEECCGGGHHHHHSCC-TTEESSHHH
T ss_pred             CCCCCCCCCCcceeccHHHHhcC---HHHHHHHHHHHcCCceEE---EECCEEEEEEcCHHHHHHHHhcC-CccchHHHH
Confidence            458999999 5999999998654   889999999999999999   89999999999999999999775 334444433


Q ss_pred             cccc-cccCCcCeeecCCchHHHHHHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcC--CCceeeHHHHHHHHHH
Q 047974          104 RKRF-DIFGETGLFNSDFDEWKHQRKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSE--EKMLVDFQDLLKRTTF  180 (497)
Q Consensus       104 ~~~~-~~~g~~~l~~~~~~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~vdl~~~~~~~~~  180 (497)
                      .... .++|...+...+|+.|+++|+.+.+.|+++.+..+.+. +.+.+.+.+...+....+  .+..+++.+++..+++
T Consensus        85 ~~~~~~~~g~~~~~~~~g~~~~~~Rr~~~~~f~~~~l~~~~~~-i~~~~~~ll~~~~~~~~~~~~~~~~~l~~~~~~~~~  163 (491)
T 3v8d_A           85 FALSAKAFGHRSIDPMDGNTTENINDTFIKTLQGHALNSLTES-MMENLQRIMRPPVSSNSKTAAWVTEGMYSFCYRVMF  163 (491)
T ss_dssp             HHHHHHHHTCCCCCGGGSSBCCCHHHHHHHHHSHHHHHHHHHH-HHHHHHHHHSCCSSCGGGGCSCEEEEHHHHHHHHHH
T ss_pred             HHHHHHhcCCcccccccchhHHHHHHHHHHHcCccchHHHHHH-HHHHHHHHHHhhhhcccCCCCCcccCHHHHHHHHHH
Confidence            3322 55666344456899999999999999999999987643 444434443333332221  3467899999999999


Q ss_pred             HHHHHhhcCCCCCCCCCCCCCCChHHHHHHHHHHH--HHHHH-------HHHHHhHHHHHHHHHHHHHHHHHHHHHhccc
Q 047974          181 DFACLIATGHNPNSLSVGFPEMGFPDAVDDACEAI--LIRHL-------EKKLANGWRTIDQFWEKQKSMKQEEIEKGME  251 (497)
Q Consensus       181 ~v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-------~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  251 (497)
                      ++++..+||.+....+.  ....+.+.+..+....  +..+.       .++..++.+.+.+++.+.+++++        
T Consensus       164 ~~~~~~~fG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~a~~~l~~~~~~~~~~~~--------  233 (491)
T 3v8d_A          164 EAGYLTIFGRDLTRRDT--QKAHILNNLDNFKQFDKVFPALVAGLPIHMFRTAHNAREKLAESLRHENLQKR--------  233 (491)
T ss_dssp             HHHHHHHHCBCCSCGGG--HHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCHHHHHHHHHHHHHTSHHHHTTC--------
T ss_pred             HHHHHHHcCccccccch--hhhhhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHhcc--------
Confidence            99999999987653211  0011222222221110  00010       34455555565555554443321        


Q ss_pred             cccccchhhHHHHHhcCCCCCCCCCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhhcccCCC-
Q 047974          252 AKEDEGIYSLLNCYLSGHEVTGPTPAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRNFSQEGF-  330 (497)
Q Consensus       252 ~~~~~~~~dll~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~-  330 (497)
                          ....|+++.++...++. ..+++++++.+++.+++||++||+.+++|++++|++||++|+++++||+++++..+. 
T Consensus       234 ----~~~~d~l~~l~~~~~~~-~~~~~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~  308 (491)
T 3v8d_A          234 ----ESISELISLRMFLNDTL-STFDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQK  308 (491)
T ss_dssp             ----BSCCHHHHHHHHHHHHH-BCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTTCC
T ss_pred             ----ccccHHHHHHHHHhhcc-CCCchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHhhccccc
Confidence                23478888887654322 348999999999999999999999999999999999999999999999999865321 


Q ss_pred             ----CCCCCCChhhhhcchhHHHHHHHhhcCCCCCCcccccccCCCccc---CCeeeCCCcEEEEeccccccCCCCCCCC
Q 047974          331 ----NKPPLVRLNELNKLVYLHAALCETLRLYPPVPFEIRIPLQPDVLP---SGHQVNQNTHVLISAYSMARMTSVWGED  403 (497)
Q Consensus       331 ----~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~---~g~~ip~g~~v~~~~~~~~~d~~~~g~~  403 (497)
                          +....++.+++.++|||+|||+|+||++| ++...|.+.+|.++.   +||.||||+.|+++.+++|+||++| +|
T Consensus       309 ~~~~~~~~~~~~~~l~~~~~l~a~i~E~lRl~p-~~~~~R~~~~d~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~-~~  386 (491)
T 3v8d_A          309 VSLEGNPICLSQAELNDLPVLDSIIKESLRLSS-ASLNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIY-PD  386 (491)
T ss_dssp             CCSSSSCCCCCHHHHHCCHHHHHHHHHHHHHHE-EECEEEEESSSEEEECSSCEEEECTTCEEEECTHHHHTCTTTS-SS
T ss_pred             cccccccccCCHHHHhcChHHHHHHHHHhhcCC-CCccceeccCCeeEeecCCcEEeCCCCEEEecchhhcCCcccC-CC
Confidence                11246899999999999999999999997 456678888776653   8999999999999999999999999 99


Q ss_pred             CCCCCCCCccCCCCCcc-------CCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCcc--c--ee--
Q 047974          404 CREFKPERWITEDGRIR-------HEPPHKFFSFNAGPRICIGKDIAFTLMKATAASIIHNYDVQVVKNHP--V--TY--  470 (497)
Q Consensus       404 p~~F~P~Rfl~~~~~~~-------~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~--~--~~--  470 (497)
                      |++|+|+||++.++...       ...+..|+|||+|+|.|+|++||++|++++++.|+++|+++++++..  .  +.  
T Consensus       387 p~~F~p~R~~~~~~~~~~~~~~~~~~~~~~~~~FG~G~~~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~  466 (491)
T 3v8d_A          387 PLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIEGQAKCPPLDQSR  466 (491)
T ss_dssp             TTSCCTTTTBCTTSSBCCCCEETTEECSCCCCTTEETTEECTTHHHHHHHHHHHHHHHHHHEEEEEC---CCCCCBCGGG
T ss_pred             ccccCcccccCCCCCcccccccccccCCCcccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceEEeCCCCCCCCCCCccc
Confidence            99999999997654321       11357899999999999999999999999999999999999987531  1  11  


Q ss_pred             eeeEEEeecCceEEEEEe
Q 047974          471 NLSIGFRMKHGLLARVSK  488 (497)
Q Consensus       471 ~~~~~~~~~~~~~~~~~~  488 (497)
                      ....+..|+.++.|+++-
T Consensus       467 ~~~~~~~p~~~i~v~~~~  484 (491)
T 3v8d_A          467 AGLGILPPLNDIEFKYKF  484 (491)
T ss_dssp             TBEEECCBSSCCEEEEEE
T ss_pred             CcCcccCCCCCeEEEEEe
Confidence            223456777788888875


No 24 
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A*
Probab=100.00  E-value=1.9e-65  Score=493.96  Aligned_cols=404  Identities=15%  Similarity=0.163  Sum_probs=299.8

Q ss_pred             HHhhhhhccCCCCCcccchhhHH-HHhhccchHHHHHHHHHHHhCCeeEEeeecc-cCcceEEEcChhhHHHhhhcCCcc
Q 047974           19 LFLHHFRKINPTPWNLPLLGMLA-SVILNINQLHDKVAQILEKTKGSFMIKGSWV-AQYDMFLTSDPANVQHIMSTNFSK   96 (497)
Q Consensus        19 ~~~~~~~~~ppgp~~~P~~G~~~-~~~~~~~~~~~~~~~~~~k~g~v~~~~~~~~-~~~~~v~v~~p~~v~~il~~~~~~   96 (497)
                      .+..+.++.||||+++|++|++. .+..+   ++.++.++ ++|||||++   ++ ++.++++++||+++++|+.++  .
T Consensus        19 ~~~~~~~~~~PGP~~~p~lG~~~~~~~~~---p~~~~~~l-~~yGpv~~~---~~~~~~~~vvv~~~~~v~~vl~~~--~   89 (436)
T 2cd8_A           19 SHMRRTQQGTTASPPVLDLGALGQDFAAD---PYPTYARL-RAEGPAHRV---RTPEGDEVWLVVGYDRARAVLADP--R   89 (436)
T ss_dssp             ---------------CCBHHHHHHHHHHC---CHHHHHHH-HTTCSEEEE---ECSSCCEEEEECSHHHHHHHHHCT--T
T ss_pred             cccchhccCCCCCCccccCCCCCcccccC---hHHHHHHH-HHhCCeeee---ccCCCCeEEEEcCHHHHHHHHcCC--C
Confidence            33444556899999999999986 44333   67888888 899999999   77 778899999999999999875  5


Q ss_pred             ccCCccc--cccc---cccCCcCeeecCCchHHHHHHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeH
Q 047974           97 YHKGSEG--RKRF---DIFGETGLFNSDFDEWKHQRKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDF  171 (497)
Q Consensus        97 ~~~~~~~--~~~~---~~~g~~~l~~~~~~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl  171 (497)
                      |.+++..  ....   ...+. +++..+|+.|+++|++++++|+++.++.+. +.+++. .+.+.+.+.+  ..++.+|+
T Consensus        90 f~~~~~~~~~~~~~~~~~~~~-~l~~~dg~~h~~~R~~~~~~fs~~~l~~~~-~~i~~~-~~~l~~~l~~--~~~~~vd~  164 (436)
T 2cd8_A           90 FSKDWRNSTTPLTEAEAALNH-NMLESDPPRHTRLRKLVAREFTMRRVELLR-PRVQEI-VDGLVDAMLA--APDGRADL  164 (436)
T ss_dssp             EECCGGGCSSCCCTTGGGTCC-SGGGCCTTHHHHHHHHHGGGSSHHHHHTTH-HHHHHH-HHHHHHHHHT--CTTSCEEH
T ss_pred             Ccccccccccccccccccccc-cccccCchHHHHHHHHhHHhhCHHHHHHHH-HHHHHH-HHHHHHHHHh--ccCCCcch
Confidence            7766542  1111   22344 788899999999999999999999998864 455555 4555555543  22568999


Q ss_pred             HHHH-HHHHHHHHHHhhcCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhcc
Q 047974          172 QDLL-KRTTFDFACLIATGHNPNSLSVGFPEMGFPDAVDDACEAILIRHLEKKLANGWRTIDQFWEKQKSMKQEEIEKGM  250 (497)
Q Consensus       172 ~~~~-~~~~~~v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  250 (497)
                      .+.+ ..+++++++. +||.+.+.      ...+.+.+..+....    ..++..++.+.+.+++.+.|+++++      
T Consensus       165 ~~~~~~~~~~~vi~~-~~G~~~~~------~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~i~~r~~------  227 (436)
T 2cd8_A          165 MESLAWPLPITVISE-LLGVPEPD------RAAFRVWTDAFVFPD----DPAQAQTAMAEMSGYLSRLIDSKRG------  227 (436)
T ss_dssp             HHHTTTHHHHHHHHH-HHTCCGGG------HHHHHHHHHHHHSCS----STTHHHHHHHHHHHHHHHHHHHHTT------
T ss_pred             HHHHHHHHHHHHHHH-HhCCCHHH------HHHHHHHHHHHhccC----CHHHHHHHHHHHHHHHHHHHHHHhc------
Confidence            9977 5799999998 68986431      112222222221100    0134556777888888888887754      


Q ss_pred             ccccccchhhHHHHHhcCCCCCCCCCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhhcccCCC
Q 047974          251 EAKEDEGIYSLLNCYLSGHEVTGPTPAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRNFSQEGF  330 (497)
Q Consensus       251 ~~~~~~~~~dll~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~  330 (497)
                           ...+|+++.+++..++++..++++++.+++..+++||+|||+++++|++++|++||++|+++++|++        
T Consensus       228 -----~~~~d~l~~ll~~~~~~~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~e~~--------  294 (436)
T 2cd8_A          228 -----QDGEDLLSALVRTSDEDGSRLTSEELLGMAHILLVAGHETTVNLIANGMYALLSHPDQLAALRADMT--------  294 (436)
T ss_dssp             -----SCCCSHHHHHHHHHHHCTTTSCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG--------
T ss_pred             -----CCCCCHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHhhChh--------
Confidence                 1236899999876433345699999999999999999999999999999999999999999999743        


Q ss_pred             CCCCCCChhhhhcchhHHHHHHHhhcCCCCCC-cccccccCCCcccCCeeeCCCcEEEEeccccccCCCCCCCCCCCCCC
Q 047974          331 NKPPLVRLNELNKLVYLHAALCETLRLYPPVP-FEIRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWGEDCREFKP  409 (497)
Q Consensus       331 ~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~-~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P  409 (497)
                                     |++|||+|+||++|+++ ...|.+.+|.++ +||.|||||.|+++.+++||||++| +||++|+|
T Consensus       295 ---------------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l-~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~P  357 (436)
T 2cd8_A          295 ---------------LLDGAVEEMLRYEGPVESATYRFPVEPVDL-DGTVIPAGDTVLVVLADAHRTPERF-PDPHRFDI  357 (436)
T ss_dssp             ---------------GHHHHHHHHHHHHCSBSSCCCBEESSCEEE-TTEEECTTCCEEECHHHHTTCTTTS-SSTTSCCT
T ss_pred             ---------------hHHHHHHHHHHhcCcccCceeEEeCCCeEE-CCEEECCCCEEEeChHHhCCCcccC-CCccccCC
Confidence                           78999999999999999 677888877666 9999999999999999999999999 99999999


Q ss_pred             CCccCCCCCccCCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhc-eEEeecC-ccceeeeeEEEeecCceEEEEE
Q 047974          410 ERWITEDGRIRHEPPHKFFSFNAGPRICIGKDIAFTLMKATAASIIHNY-DVQVVKN-HPVTYNLSIGFRMKHGLLARVS  487 (497)
Q Consensus       410 ~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  487 (497)
                      |||           ...|+|||+|+|.|+|++||++|++++++.|+++| ++++..+ .+.......+++++.+++|+++
T Consensus       358 eR~-----------~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~  426 (436)
T 2cd8_A          358 RRD-----------TAGHLAFGHGIHFCIGAPLARLEARIAVRALLERCPDLALDVSPGELVWYPNPMIRGLKALPIRWR  426 (436)
T ss_dssp             TSC-----------CTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHSCTTCCBCSCGGGCCBCCCTTBCCBSCCEEC--
T ss_pred             CCC-----------CCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCceecCCCccceeccCcccCCcceeEEEEe
Confidence            995           13689999999999999999999999999999999 6998642 3333344445677789999999


Q ss_pred             ecCCCCC
Q 047974          488 KRSAQPR  494 (497)
Q Consensus       488 ~r~~~~~  494 (497)
                      +|++.-+
T Consensus       427 ~r~~~~~  433 (436)
T 2cd8_A          427 RGREAGR  433 (436)
T ss_dssp             -------
T ss_pred             cCccccc
Confidence            9986544


No 25 
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A*
Probab=100.00  E-value=9.7e-65  Score=500.53  Aligned_cols=439  Identities=16%  Similarity=0.191  Sum_probs=308.9

Q ss_pred             hccCCCCCc-ccchhhHHHHhhccchHHHHHHHHHHHhCCeeEEeeecccCcceEEEcChhhHHHhhhcCCccccCCccc
Q 047974           25 RKINPTPWN-LPLLGMLASVILNINQLHDKVAQILEKTKGSFMIKGSWVAQYDMFLTSDPANVQHIMSTNFSKYHKGSEG  103 (497)
Q Consensus        25 ~~~ppgp~~-~P~~G~~~~~~~~~~~~~~~~~~~~~k~g~v~~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~~~~~~~  103 (497)
                      .+.||||++ +|++||++++..+   ++.++.+++++||++|++   ++|+.++++++||+++++++.++...+...+..
T Consensus        17 ~~~PPgp~~~~P~iG~~~~~~~~---~~~~~~~l~~kYG~i~~v---~lg~~~~vvv~~p~~~~~il~~~~~~~~~~~~~   90 (498)
T 3b6h_A           17 PGEPPLDLGSIPWLGYALDFGKD---AASFLTRMKEKHGDIFTI---LVGGRYVTVLLDPHSYDAVVWEPRTRLDFHAYA   90 (498)
T ss_dssp             TTCCCEECCSSTTTBTHHHHHHC---HHHHHHHHHHHHCSEEEE---EETTEEEEEECCGGGHHHHHTCCTTTEECCHHH
T ss_pred             CCCCCCCCCCCcchhhHHHhccC---HHHHHHHHHHHcCCeEEE---EECCeeEEEEcCHHHHHHHHhCccccCCchhhH
Confidence            348999998 8999999998654   788999999999999999   999999999999999999998763324433333


Q ss_pred             cccc-cccCCcCeeecCCchHHHHHHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHHHHHHHHH
Q 047974          104 RKRF-DIFGETGLFNSDFDEWKHQRKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLLKRTTFDF  182 (497)
Q Consensus       104 ~~~~-~~~g~~~l~~~~~~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~v  182 (497)
                      .... ..+|. +++..+++.|   |+++.++|+.+.+..+.+.+.+ .+.+.+..........+..+++...+..+++++
T Consensus        91 ~~~~~~~~g~-~~~~~~~~~~---rr~~~~~~~~~~l~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~l~~~~~~vi~~~  165 (498)
T 3b6h_A           91 IFLMERIFDV-QLPHYSPSDE---KARMKLTLLHRELQALTEAMYT-NLHAVLLGDATEAGSGWHEMGLLDFSYSFLLRA  165 (498)
T ss_dssp             HHHHHHTSCC-CCTTCCHHHH---HHHHHTTSSHHHHHHHHHHHHH-HHHHHHHHHHHHHCSSCEEEEHHHHHHHHHHHH
T ss_pred             HHHHHHHcCC-CccccCHHHH---HHHHHHhhchHhHHHHHHHHHH-HHHHHHhhcccccCCCcceecHHHHHHHHHHHH
Confidence            2222 45666 6666666666   4566678888888877654433 324444333222123345689999999999999


Q ss_pred             HHHhhcCCCCCCCCCCCCCCChHHHHHHHHHHH-----HHHHHH---------HHHHhHHHHHHHHHHHHHHHHHHHHHh
Q 047974          183 ACLIATGHNPNSLSVGFPEMGFPDAVDDACEAI-----LIRHLE---------KKLANGWRTIDQFWEKQKSMKQEEIEK  248 (497)
Q Consensus       183 ~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~---------~~~~~~~~~~~~~~~~~i~~~~~~~~~  248 (497)
                      ++.++||..++..+... ...+.+.+.......     ...++.         +...++.+.+.+   .+++++.   ..
T Consensus       166 ~~~~~fG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~---~~  238 (498)
T 3b6h_A          166 GYLTLYGIEALPRTHES-QAQDRVHSADVFHTFRQLDRLLPKLARGSLSVGDKDHMCSVKSRLWK---LLSPARL---AR  238 (498)
T ss_dssp             HHHHHHCBSCSSCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHH---HTCHHHH---TT
T ss_pred             HHHhhcCcccccccccc-hhhHHHhhHHHHHHHHHHHhhHHHHHHHhcCchhhHHHHHHHHHHHH---HHHHHHH---hc
Confidence            99999998764221000 000111111111110     011110         011111111111   1111111   11


Q ss_pred             ccccccccchhhHHHHHhcCCCCCCCCCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhhcccC
Q 047974          249 GMEAKEDEGIYSLLNCYLSGHEVTGPTPAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRNFSQE  328 (497)
Q Consensus       249 ~~~~~~~~~~~dll~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~  328 (497)
                      .      ....|+++.+++..++. ..++++++. .++.+++||++||+++++|++++|++||++|+++++|++++++..
T Consensus       239 ~------~~~~d~l~~ll~~~~~~-~~~~~~~~~-~~~~~l~ag~~tt~~~l~~~l~~L~~~P~~~~kl~~Ei~~v~~~~  310 (498)
T 3b6h_A          239 R------AHRSKWLESYLLHLEEM-GVSEEMQAR-ALVLQLWATQGNMGPAAFWLLLFLLKNPEALAAVRGELESILWQA  310 (498)
T ss_dssp             C------BSCCHHHHHHHHHHHHT-TCCHHHHHH-HHHHHHHHHHTTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHC-
T ss_pred             c------ccHHHHHHHHHHHHHhC-CCCHHHHHH-HHHHHHHHhhhchHHHHHHHHHHHHcCHHHHHHHHHHHHHHhccc
Confidence            1      24568998888654322 236777887 888889999999999999999999999999999999999998632


Q ss_pred             CCC--CCCCCChhhhhcchhHHHHHHHhhcCCCCCCcccccccCCCccc----CCeeeCCCcEEEEeccc-cccCCCCCC
Q 047974          329 GFN--KPPLVRLNELNKLVYLHAALCETLRLYPPVPFEIRIPLQPDVLP----SGHQVNQNTHVLISAYS-MARMTSVWG  401 (497)
Q Consensus       329 ~~~--~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~----~g~~ip~g~~v~~~~~~-~~~d~~~~g  401 (497)
                      +..  ....++.+++.+||||+|||+|+||++|+ +...|.+.+|.++.    +||.|||||.|+++.++ +|+||++| 
T Consensus       311 ~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~-~~~~R~~~~d~~~~~~~g~g~~ip~Gt~v~~~~~~~~~~d~~~~-  388 (498)
T 3b6h_A          311 EQPVSQTTTLPQKVLDSTPVLDSVLSESLRLTAA-PFITREVVVDLAMPMADGREFNLRRGDRLLLFPFLSPQRDPEIY-  388 (498)
T ss_dssp             ---------CCTHHHHSCHHHHHHHHHHHHHHBC-BCEEEEECSCEEEECTTSCEEEECTTCEEEECTCCCCCTCTTTS-
T ss_pred             CCCCCcccccCHHHHhcCHHHHHHHHHHHhccCC-CcceeeecCCeeeecCCCCeEEeCCCCEEEeCchHhhcCCcccc-
Confidence            100  01136899999999999999999999975 67788888877652    68999999999999999 99999999 


Q ss_pred             CCCCCCCCCCccCCCCCcc-------CCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCcc--c--ee
Q 047974          402 EDCREFKPERWITEDGRIR-------HEPPHKFFSFNAGPRICIGKDIAFTLMKATAASIIHNYDVQVVKNHP--V--TY  470 (497)
Q Consensus       402 ~~p~~F~P~Rfl~~~~~~~-------~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~--~--~~  470 (497)
                      +||++|+||||++.++..+       ...+..|+|||+|+|.|||++||++|++++++.|+++|++++.++..  .  +.
T Consensus       389 ~~p~~F~PeRfl~~~~~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~  468 (498)
T 3b6h_A          389 TDPEVFKYNRFLNPDGSEKKDFYKDGKRLKNYNMPWGAGHNHCLGRSYAVNSIKQFVFLVLVHLDLELINADVEIPEFDL  468 (498)
T ss_dssp             SSTTSCCTTTTBCTTSSBCCCCEETTEECSCSCCTTEETTEECSSHHHHHHHHHHHHHHHHHTEEEEESSTTCCCCCBCG
T ss_pred             CChhhcCcccccCCCcccccccccccccCCcceeccCCCCCCCCcHHHHHHHHHHHHHHHHHHceeEeCCCCCCCCCCCc
Confidence            9999999999997643211       01356899999999999999999999999999999999999976531  1  11


Q ss_pred             -eeeE-EEeecCceEEEEEecCC
Q 047974          471 -NLSI-GFRMKHGLLARVSKRSA  491 (497)
Q Consensus       471 -~~~~-~~~~~~~~~~~~~~r~~  491 (497)
                       ..+. +..|+.++++++++|.-
T Consensus       469 ~~~~~~~~~p~~~~~~~~~~~~~  491 (498)
T 3b6h_A          469 SRYGFGLMQPEHDVPVRYRIRPH  491 (498)
T ss_dssp             GGTBSSBCCBSSCCEEEEEECCC
T ss_pred             cccccccCCCCCCccEEEEeccc
Confidence             1223 34666788999988864


No 26 
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A*
Probab=100.00  E-value=6.6e-66  Score=508.34  Aligned_cols=438  Identities=15%  Similarity=0.196  Sum_probs=310.1

Q ss_pred             ccCCCCCc-ccchhhHHHHhhccchHHHHHHHHHHHhCCeeEEeeecccCcceEEEcChhhHHHhhhcCCccccCCcccc
Q 047974           26 KINPTPWN-LPLLGMLASVILNINQLHDKVAQILEKTKGSFMIKGSWVAQYDMFLTSDPANVQHIMSTNFSKYHKGSEGR  104 (497)
Q Consensus        26 ~~ppgp~~-~P~~G~~~~~~~~~~~~~~~~~~~~~k~g~v~~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~~~~~~~~  104 (497)
                      +.||||++ +|++||++++..   +++.++.+++++||++|++   ++|+.++++|+||+++++++.++. .+...+...
T Consensus        13 ~~pPgp~~~~P~iG~~~~~~~---~~~~~~~~~~~kyG~i~~~---~~g~~~~vvv~dp~~~~~il~~~~-~~~~~~~~~   85 (491)
T 3dax_A           13 GEPPLENGLIPYLGCALQFGA---NPLEFLRANQRKHGHVFTC---KLMGKYVHFITNPLSYHKVLCHGK-YFDWKKFHF   85 (491)
T ss_dssp             TCCCEEEEEESCTTTTGGGTC---CHHHHHHHHHHHHCSEEEE---EETTEEEEEECCGGGTHHHHSCCT-TEESSHHHH
T ss_pred             CCCCcCCCcccchhhHHHHhh---CHHHHHHHHHHhcCCeEEE---EECCeEEEEEcChHHHHHHHcCCc-cCChHHHHH
Confidence            47899888 899999988854   3788999999999999999   999999999999999999998753 233333222


Q ss_pred             ccc-cccCCcCee-ecCCchHHHHHHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhh--cCCCceeeHHHHHHHHHH
Q 047974          105 KRF-DIFGETGLF-NSDFDEWKHQRKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHV--SEEKMLVDFQDLLKRTTF  180 (497)
Q Consensus       105 ~~~-~~~g~~~l~-~~~~~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~--~~~~~~vdl~~~~~~~~~  180 (497)
                      ... ..+|. +++ ..+++.|+++|+.+.+.|+.+.+..+.+.+. +.+.+.+.......  ...+..+++...+..+++
T Consensus        86 ~~~~~~~g~-~~~~~~~g~~w~~~r~~~~~~f~~~~l~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~i~  163 (491)
T 3dax_A           86 ATSAKAFGH-RSIDPMDGNTTENINDTFIKTLQGHALNSLTESMM-ENLQRIMRPPVSSNSKTAAWVTEGMYSFCYRVMF  163 (491)
T ss_dssp             HHHHHHHTC-CCCCGGGTSBCCCHHHHHHHHHSHHHHHHHHHHHH-HHHHHHHC----------CCEEEEHHHHHHHHHH
T ss_pred             HHHHHHcCC-CcccccchhHHHHHHHHHHHhcCcccHHHHHHHHH-HHHHHHHHhhccCCcCCCCceeccHHHHHHHHHH
Confidence            222 34566 665 6788999999999999999988888765433 23233332221110  123356899999999999


Q ss_pred             HHHHHhhcCCCCCCCCCCCCCCChHHHHHHHHHHH-HHHHH--------HHHHHhHHHHHHHHHHHHHHHHHHHHHhccc
Q 047974          181 DFACLIATGHNPNSLSVGFPEMGFPDAVDDACEAI-LIRHL--------EKKLANGWRTIDQFWEKQKSMKQEEIEKGME  251 (497)
Q Consensus       181 ~v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--------~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  251 (497)
                      ++++.++||.+....+.  ....+.+.+..+.... ....+        .+...++.+.+.+.+   ++++.   ...  
T Consensus       164 ~~~~~~~fG~~~~~~~~--~~~~~~~~~~~~~~~~~~~p~l~~~lp~~~~~~~~~~~~~~~~~~---~~~~~---~~~--  233 (491)
T 3dax_A          164 EAGYLTIFGRDLTRRDT--QKAHILNNLDNFKQFDKVFPALVAGLPIHMFRTAHNAREKLAESL---RHENL---QKR--  233 (491)
T ss_dssp             HHHHHHHHCBCSTTGGG--HHHHHHHHHHHHHHHHHHHHHHHTTCCGGGSHHHHHHHHHHHHHT---SHHHH---TTC--
T ss_pred             HHhHHHHcCcccccccc--hhhhhhHHHHHHHHHHHHhHHHHHhCCHhhhhHHHHHHHHHHHHH---HHHHh---hcc--
Confidence            99999999987643211  0000111111111100 01111        111122222222111   11111   111  


Q ss_pred             cccccchhhHHHHHhcCCCCCCCCCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhhcccCCCC
Q 047974          252 AKEDEGIYSLLNCYLSGHEVTGPTPAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRNFSQEGFN  331 (497)
Q Consensus       252 ~~~~~~~~dll~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~  331 (497)
                          ....|+++.+++..++. ..++++++.++++.+++||+|||+++++|++++|++||++|+++++||+++++..+..
T Consensus       234 ----~~~~d~l~~ll~~~~~~-~~~~~~~i~~~~~~~~~ag~~tta~tl~~~l~~L~~~P~~~~kl~~Ei~~v~~~~~~~  308 (491)
T 3dax_A          234 ----ESISELISLRMFLNDTL-STFDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQK  308 (491)
T ss_dssp             ----BSCCHHHHHHHHHHHHH-BCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHTTTCC
T ss_pred             ----cchhHHHHHHHHHHHhc-CCChHHHHHHHHHHHHHHhccchHHHHHHHHHHHHcCHHHHHHHHHHHHHHhhccccc
Confidence                23568888877643221 2378899998999999999999999999999999999999999999999998642100


Q ss_pred             -----CCCCCChhhhhcchhHHHHHHHhhcCCCCCCcccccccCCCccc---CCeeeCCCcEEEEeccccccCCCCCCCC
Q 047974          332 -----KPPLVRLNELNKLVYLHAALCETLRLYPPVPFEIRIPLQPDVLP---SGHQVNQNTHVLISAYSMARMTSVWGED  403 (497)
Q Consensus       332 -----~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~---~g~~ip~g~~v~~~~~~~~~d~~~~g~~  403 (497)
                           ....++.+++.+||||+|||+||||++|+ +...|.+.+|.++.   +||.|||||.|+++.+++|+||++| +|
T Consensus       309 ~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~-~~~~R~~~~d~~l~~~~~g~~ip~Gt~v~~~~~~~~~d~~~~-~d  386 (491)
T 3dax_A          309 VSLEGNPICLSQAELNDLPVLDSIIKESLRLSSA-SLNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIY-PD  386 (491)
T ss_dssp             CCSSSCCCCCCHHHHHCCHHHHHHHHHHHHHHEE-ECEEEEESSSEEEEETTEEEEECTTCEEEECTHHHHTCTTTS-SS
T ss_pred             cccCCCccccCHHHHhcCHHHHHHHHHHHhcCCC-ccceeEecCCeEeecCCCcEEeCCCCEEEechHhhcCCcccC-CC
Confidence                 11146999999999999999999999974 67778888776653   6899999999999999999999999 99


Q ss_pred             CCCCCCCCccCCCCCcc-------CCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCcc--c--ee-e
Q 047974          404 CREFKPERWITEDGRIR-------HEPPHKFFSFNAGPRICIGKDIAFTLMKATAASIIHNYDVQVVKNHP--V--TY-N  471 (497)
Q Consensus       404 p~~F~P~Rfl~~~~~~~-------~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~--~--~~-~  471 (497)
                      |++|+||||+++++..+       ...+..|+|||+|+|.|+|++||++|++++++.||++|++++.++..  .  +. .
T Consensus       387 p~~F~PeRfl~~~~~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~  466 (491)
T 3dax_A          387 PLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIEGQAKCPPLDQSR  466 (491)
T ss_dssp             TTSCCTTTTBCTTSSBCCCCEETTEECSCSCCTTEETTEECTTHHHHHHHHHHHHHHHHHHEEEEETTTTCCCCCBCGGG
T ss_pred             HHHcCCccccCCCccccccccccCcCCccccccCCCCCCCCCcHHHHHHHHHHHHHHHHHHeeEEEccCCCCCCCCCccc
Confidence            99999999997543221       01356899999999999999999999999999999999999976531  1  11 1


Q ss_pred             eeE-EEeecCceEEEEEec
Q 047974          472 LSI-GFRMKHGLLARVSKR  489 (497)
Q Consensus       472 ~~~-~~~~~~~~~~~~~~r  489 (497)
                      .+. +..|+.+++++++..
T Consensus       467 ~~~~~~~p~~~~~~~~r~~  485 (491)
T 3dax_A          467 AGLGILPPLNDIEFKYKFK  485 (491)
T ss_dssp             TBEEECCBSSCCEEEEEEC
T ss_pred             ccccccCCCCCceEEEEec
Confidence            233 446666777776653


No 27 
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A*
Probab=100.00  E-value=1.3e-64  Score=496.92  Aligned_cols=430  Identities=16%  Similarity=0.141  Sum_probs=296.1

Q ss_pred             hccCCCCCc-ccchhhHHHHhhccchHHHHHHHHHHHhCCeeEEeeecccCcceEEEcChhhHHHhhhcCCccccCCccc
Q 047974           25 RKINPTPWN-LPLLGMLASVILNINQLHDKVAQILEKTKGSFMIKGSWVAQYDMFLTSDPANVQHIMSTNFSKYHKGSEG  103 (497)
Q Consensus        25 ~~~ppgp~~-~P~~G~~~~~~~~~~~~~~~~~~~~~k~g~v~~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~~~~~~~  103 (497)
                      .+.||||++ +|++||++++..+   ++.++.+++++||+||++   ++++.++++++||+++++++.++. .+...+..
T Consensus        17 ~~~pPgp~~~~P~iG~~~~~~~~---~~~~~~~l~~~yG~v~~~---~~g~~~~vvv~~~~~~~~il~~~~-~~~~~~~~   89 (475)
T 3b98_A           17 RNEPPLDKGMIPWLGHALEFGKD---AAKFLTRMKEKHGDIFTV---RAAGLYITVLLDSNCYDAVLSDVA-SLDQTSYA   89 (475)
T ss_dssp             TTCCCEECCSSTTTBTHHHHHHC---HHHHHHHHHHHHCSEEEE---EETTEEEEEECCTTTHHHHHTCTT-TEESHHHH
T ss_pred             CCCCCCCCCCcchHHhHHHHhhC---HHHHHHHHHHHhCCeEEE---EECCceEEEEeCHHHHHHHHcCcc-cCCchHHH
Confidence            458999998 8999999998654   788999999999999999   899999999999999999998752 24433322


Q ss_pred             cccc-cccCCcCeeecCCchHHHHHHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhh-cCCCceeeHHHHHHHHHHH
Q 047974          104 RKRF-DIFGETGLFNSDFDEWKHQRKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHV-SEEKMLVDFQDLLKRTTFD  181 (497)
Q Consensus       104 ~~~~-~~~g~~~l~~~~~~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~vdl~~~~~~~~~~  181 (497)
                      .... ..+|. +++..+++.|   |+++.++|+.+.+..+.+. +.+.+.+.+....... ......+++...+..++++
T Consensus        90 ~~~~~~~~g~-~~~~~~~~~~---R~~~~~~f~~~~l~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (475)
T 3b98_A           90 QVLMKRIFNM-ILPSHNPESE---KKRAEMHFQGASLTQLSNS-MQNNLRLLMTPSEMGLKTSEWKKDGLFNLCYSLLFK  164 (475)
T ss_dssp             HHHHHHTTCC-CCTTCCHHHH---HHHHHHHTSHHHHHHHHHH-HHHHHHHHSSTTTTTCSSCSCEEEEHHHHHHHHHHH
T ss_pred             HHHHHHHhCC-CCCCCChHHH---HHHHHHHcChhhHHHHHHH-HHHHHHHHHhhcccccCCCCceeehHHHHHHHHHHH
Confidence            2222 45666 6666666655   6777789999898887543 3333333332222111 1223468899999999999


Q ss_pred             HHHHhhcCCCCCCCCCCCCCCChHHHHHHHHHHH-HHHHH-----HHHHHhHHHHHHHHHHHHHHHHHHHHHhccccccc
Q 047974          182 FACLIATGHNPNSLSVGFPEMGFPDAVDDACEAI-LIRHL-----EKKLANGWRTIDQFWEKQKSMKQEEIEKGMEAKED  255 (497)
Q Consensus       182 v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-----~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  255 (497)
                      +++...||.+..      ....+.+....+.... ...++     .....+......+.+.+.+.+.        .....
T Consensus       165 ~~~~~~~g~~~~------~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~  230 (475)
T 3b98_A          165 TGYLTVFGAENN------NSAALTQIYEEFRRFDKLLPKLARTTVNKEEKQIASAAREKLWKWLTPS--------GLDRK  230 (475)
T ss_dssp             HHHHHHHCCTTS------CHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHSCT--------TSCCC
T ss_pred             HhhhheeCCccc------cchhcHHHHHHHHHHHhhhHHHHHHhcChhhhHHHHHHHHHHHHHHHHH--------Hhhcc
Confidence            999988995321      1111122222111110 01111     0000011111111111111100        00011


Q ss_pred             cchhhHHHHHhcCCCCCCCCCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhhcccCCCCCCCC
Q 047974          256 EGIYSLLNCYLSGHEVTGPTPAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRNFSQEGFNKPPL  335 (497)
Q Consensus       256 ~~~~dll~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~  335 (497)
                      ....|+++.+++..++. ..++++++. +++.+++||+|||+.+++|++++|++||++|++|++|++.  +      ...
T Consensus       231 ~~~~d~l~~ll~~~~~~-~~~~~~~i~-~~~~~l~ag~~TTa~~l~~~l~~L~~~P~~~~~l~~Ei~~--~------~~~  300 (475)
T 3b98_A          231 PREQSWLGSYVKQLQDE-GIDAEMQRR-AMLLQLWVTQGNAGPAAFWVMGYLLTHPEALRAVREEIQG--G------KHL  300 (475)
T ss_dssp             CCTTSHHHHHHHHHHHT-TCCHHHHHH-HHHHHHHHHHSSHHHHHHHHHHHHHTCHHHHHHHHHHHC-------------
T ss_pred             ccccHHHHHHHHHHHHc-CCCHHHHHH-HHHHHHHHccccHHHHHHHHHHHHHcCHHHHHHHHHHHhc--C------CCC
Confidence            34578999888753322 247888888 8899999999999999999999999999999999999992  1      124


Q ss_pred             CChhhhhcchhHHHHHHHhhcCCCCCCcccccccCCCccc----CCeeeCCCcEEEEeccc-cccCCCCCCCCCCCCCCC
Q 047974          336 VRLNELNKLVYLHAALCETLRLYPPVPFEIRIPLQPDVLP----SGHQVNQNTHVLISAYS-MARMTSVWGEDCREFKPE  410 (497)
Q Consensus       336 ~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~----~g~~ip~g~~v~~~~~~-~~~d~~~~g~~p~~F~P~  410 (497)
                      ++.+++.+||||+|||+|+||++|+ +...|.+.+|.++.    +||.|||||.|+++.++ +||||++| +||++||||
T Consensus       301 ~~~~~~~~lpyl~a~i~E~lRl~p~-~~~~R~~~~d~~l~~~~g~g~~Ip~Gt~V~~~~~~~~~rdp~~~-~dP~~F~Pe  378 (475)
T 3b98_A          301 RLEERQKNTPVFDSVLWETLRLTAA-ALITRDVTQDKKICLSNGQEYHLRRGDRLCVFPFISPQMDPQIH-QQPEMFQFD  378 (475)
T ss_dssp             -------CCHHHHHHHHHHHHHHEE-ECEEEEECSCEEEECTTSCEEEECTTCEEEECTCCCCCTCTTTS-SSTTSCCTT
T ss_pred             CCHHHHhcCHHHHHHHHHHHhcCCc-cceeEEecCCeEeecCCCCeEEECCCCEEEeCcHHHhcCChhhc-CCcccCCcc
Confidence            5899999999999999999999986 67778888876652    78999999999999999 99999999 999999999


Q ss_pred             CccCCCCCcc-------CCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCcc--ce--e-eee-EEEe
Q 047974          411 RWITEDGRIR-------HEPPHKFFSFNAGPRICIGKDIAFTLMKATAASIIHNYDVQVVKNHP--VT--Y-NLS-IGFR  477 (497)
Q Consensus       411 Rfl~~~~~~~-------~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~--~~--~-~~~-~~~~  477 (497)
                      ||++.++..+       ...+..|+|||+|+|.|+|++||++|++++++.|+++|++++.++..  ..  . ..+ .+..
T Consensus       379 Rfl~~~~~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~  458 (475)
T 3b98_A          379 RFLNADRTEKKDFFKNGARVKYPSVPWGTEDNLCPGRHFAVHAIKELVFTILTRFDVELCDKNATVPLVDPSRYGFGILQ  458 (475)
T ss_dssp             TTBCTTSCBCCCCBSSSCBCSCSCCTTCSTTSCCTTHHHHHHHHHHHHHHHHHHEEEEESSTTCCCCCBCGGGTBEEECC
T ss_pred             hhcCCCCCccccccccccccccCccCcCCCCCCCCCHHHHHHHHHHHHHHHHHhEEEEECCCCCCCCCCCcccccccccC
Confidence            9997643211       11356899999999999999999999999999999999999987531  11  1 123 3556


Q ss_pred             ecCceEEEEEecCCC
Q 047974          478 MKHGLLARVSKRSAQ  492 (497)
Q Consensus       478 ~~~~~~~~~~~r~~~  492 (497)
                      |+.++++++++|+.+
T Consensus       459 p~~~~~~~~~~R~~~  473 (475)
T 3b98_A          459 PAGDLEIRYRIRFHH  473 (475)
T ss_dssp             BSSCCEEEEEEC---
T ss_pred             CCCCceEEEEecccc
Confidence            777999999999764


No 28 
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A*
Probab=100.00  E-value=4.5e-63  Score=476.47  Aligned_cols=404  Identities=14%  Similarity=0.134  Sum_probs=313.2

Q ss_pred             CCcccchhhHHHHhhccchHHHHHHHHHHHhC-CeeEEeeecccCcceEEEcChhhHHHhhhcCCccccCCcccc-ccc-
Q 047974           31 PWNLPLLGMLASVILNINQLHDKVAQILEKTK-GSFMIKGSWVAQYDMFLTSDPANVQHIMSTNFSKYHKGSEGR-KRF-  107 (497)
Q Consensus        31 p~~~P~~G~~~~~~~~~~~~~~~~~~~~~k~g-~v~~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~~~~~~~~-~~~-  107 (497)
                      |++.|++||+.++..+   ++.++.+++++|| |||++   ++++.+.+++++|+.++.++. . ..|.+...+. ... 
T Consensus         5 ~Pg~P~lG~~~~~~~~---p~~~~~~l~~~yg~pv~~~---~~~g~~~v~v~~~~~~~~l~~-~-~~~~~~~~~~~~~~~   76 (417)
T 1izo_A            5 IPHDKSLDNSLTLLKE---GYLFIKNRTERYNSDLFQA---RLLGKNFICMTGAEAAKVFYD-T-DRFQRQNALPKRVQK   76 (417)
T ss_dssp             -CBCCCTTHHHHHHHH---GGGHHHHHHHHTTSSEEEE---EETTEEEEEECSHHHHHHHTC-T-TTEECTTCSCHHHHT
T ss_pred             CCCCCccchHHHHhhC---cHHHHHHHHHHhCCCeEEe---ecCCccEEEECCHHHHHHHhc-c-cccccccccccchhh
Confidence            4445999999999765   6779999999998 89998   777889999999999986553 3 4565543322 122 


Q ss_pred             cccCCcCeeecCCchHHHHHHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHHHHHHHHHHHHhh
Q 047974          108 DIFGETGLFNSDFDEWKHQRKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLLKRTTFDFACLIA  187 (497)
Q Consensus       108 ~~~g~~~l~~~~~~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~v~~~~~  187 (497)
                      .++|..+++..+|+.|+++|++++++|+++.++.+.+ .+++. .+.+.+.+..    ++.+|+.+.+..+++++++.+ 
T Consensus        77 ~~~g~~~l~~~dg~~h~~~R~~~~~~f~~~~l~~~~~-~i~~~-~~~l~~~l~~----~~~~dl~~~~~~~~~~vi~~~-  149 (417)
T 1izo_A           77 SLFGVNAIQGMDGSAHIHRKMLFLSLMTPPHQKRLAE-LMTEE-WKAAVTRWEK----ADEVVLFEEAKEILCRVACYW-  149 (417)
T ss_dssp             TTTCTTCGGGCCHHHHHHHHHHHHHTSSHHHHHHHHH-HHHHH-HHHHHHHHTT----SSEEEHHHHHHHHHHHHHHHH-
T ss_pred             hhccccceeecCChHHHHHHHHhhhhcCHHHHHHHHH-HHHHH-HHHHHHHHhc----CCCeeHHHHHHHHHHHHHHHH-
Confidence            4566447888999999999999999999999998754 45555 3445454432    468999999999999999998 


Q ss_pred             cCCCCCCCCCCCCCCChHHHHHHHHHHHHH-HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccccccccchhhHHHHHh
Q 047974          188 TGHNPNSLSVGFPEMGFPDAVDDACEAILI-RHLEKKLANGWRTIDQFWEKQKSMKQEEIEKGMEAKEDEGIYSLLNCYL  266 (497)
Q Consensus       188 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~dll~~ll  266 (497)
                      ||.+++..    ....+.+.+..+...... ........++.+.+.+++.++|+++++....       ...+|+++.++
T Consensus       150 ~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~-------~~~~d~l~~ll  218 (417)
T 1izo_A          150 AGVPLKET----EVKERADDFIDMVDAFGAVGPRHWKGRRARPRAEEWIEVMIEDARAGLLK-------TTSGTALHEMA  218 (417)
T ss_dssp             HTCCCCTT----THHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHHHHHHHHHHHHTTSSC-------CCTTSHHHHHH
T ss_pred             cCCCCCch----HHHHHHHHHHHHHhhcccCCccchhHHHHHHHHHHHHHHHHHHHHhhccC-------CCcCCHHHHHH
Confidence            59876521    111122222222221100 0112345567788889999999887653211       23468999999


Q ss_pred             cCCCCCCCCCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhhcccCCCCCCCCCChhhhhcchh
Q 047974          267 SGHEVTGPTPAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRNFSQEGFNKPPLVRLNELNKLVY  346 (497)
Q Consensus       267 ~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~l~~lp~  346 (497)
                      ...+.+|..++++++..++.. ++||++||+++++|++++|++||++|+++++|                      ++||
T Consensus       219 ~~~~~~g~~l~~~~~~~~~~~-~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~E----------------------~~~~  275 (417)
T 1izo_A          219 FHTQEDGSQLDSRMAAIELIN-VLRPIVAISYFLVFSALALHEHPKYKEWLRSG----------------------NSRE  275 (417)
T ss_dssp             HCBCTTSCBCCHHHHHHHHHH-HHHHHHTHHHHHHHHHHHHHHSTHHHHHHHTC----------------------CHHH
T ss_pred             HhccccCCCCCHHHHHHHHHH-HHhhhhHHHHHHHHHHHHHhhCHHHHHHHHhc----------------------CCHH
Confidence            875555566888887777665 45999999999999999999999999999986                      3689


Q ss_pred             HHHHHHHhhcCCCCCCcccccccCCCcccCCeeeCCCcEEEEeccccccCCCCCCCCCCCCCCCCccCCCCCccCCCCCc
Q 047974          347 LHAALCETLRLYPPVPFEIRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWGEDCREFKPERWITEDGRIRHEPPHK  426 (497)
Q Consensus       347 l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~  426 (497)
                      +++||+|+||++|+++...|.+.+|.++ +||.||||+.|+++.+++||||++| +||++|+|+||++.+     ..+..
T Consensus       276 l~a~i~E~lRl~p~~~~~~R~~~~d~~l-~g~~ip~G~~v~~~~~~~~rdp~~~-~dp~~F~P~R~~~~~-----~~~~~  348 (417)
T 1izo_A          276 REMFVQEVRRYYPFGPFLGALVKKDFVW-NNCEFKKGTSVLLDLYGTNHDPRLW-DHPDEFRPERFAERE-----ENLFD  348 (417)
T ss_dssp             HHHHHHHHHHHSCCCCEEEEEECSCEEE-TTEEECTTCEEEEEHHHHHTCTTTS-SSTTSCCGGGGTTCC-----CCSSS
T ss_pred             HHHHHHHHhhcCCcccccceeecCCeeE-CCEEECCCCEEEecHHHhhcCcccc-CCccccChhhcCCCC-----CCCcc
Confidence            9999999999999999988988887777 9999999999999999999999999 999999999999653     14568


Q ss_pred             ccccCCC----CCCCcchHHHHHHHHHHHHHHHhhceEEeecCccceeeeeEEEeecCceEEEEEecC
Q 047974          427 FFSFNAG----PRICIGKDIAFTLMKATAASIIHNYDVQVVKNHPVTYNLSIGFRMKHGLLARVSKRS  490 (497)
Q Consensus       427 ~~~Fg~G----~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  490 (497)
                      |+|||+|    +|.|+|++||++|++++++.|+++|++++.++.........+..|++++++++++|.
T Consensus       349 ~~~FG~G~r~~~r~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~r~  416 (417)
T 1izo_A          349 MIPQGGGHAEKGHRCPGEGITIEVMKASLDFLVHQIEYDVPEQSLHYSLARMPSLPESGFVMSGIRRK  416 (417)
T ss_dssp             CCTTCSSCTTSSSCCTTHHHHHHHHHHHHHHHHHTEEEECCSCCCCCCSSSSSCCCTTCCEEEEEEEC
T ss_pred             eeCCCCCCCCCCCcCCCHHHHHHHHHHHHHHHHHhCeEEeCCCCcCcccccCCCCCCCCceEeeeeCC
Confidence            9999999    599999999999999999999999999987643221223456678889999999985


No 29 
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Probab=100.00  E-value=1.2e-62  Score=468.44  Aligned_cols=375  Identities=19%  Similarity=0.264  Sum_probs=292.1

Q ss_pred             CCCcccchhhHHHHhhccchHHHHHHHHHHHhCCeeEEeeecccCcceEEEcChhhHHHhhhcCCccccCCc-ccccccc
Q 047974           30 TPWNLPLLGMLASVILNINQLHDKVAQILEKTKGSFMIKGSWVAQYDMFLTSDPANVQHIMSTNFSKYHKGS-EGRKRFD  108 (497)
Q Consensus        30 gp~~~P~~G~~~~~~~~~~~~~~~~~~~~~k~g~v~~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~~~~~-~~~~~~~  108 (497)
                      .++.+|++||++++..+   ++.++.+++++|||+++    ++++.+.++++||+++++++.++  .|.+++ .+.....
T Consensus         3 ~~~~~p~iGnl~~~~~~---p~~~~~~l~~~yGpv~~----~~g~~~~vvv~~~~~i~~il~~~--~f~~~~~~~~~~~~   73 (389)
T 1n97_A            3 RLSLREAWPYLKDLQQD---PLAVLLAWGRAHPRLFL----PLPRFPLALIFDPEGVEGALLAE--GTTKATFQYRALSR   73 (389)
T ss_dssp             ECCHHHHHHHHHHHHHC---HHHHHHHHHHHCSEEEE----CCTTCCEEEECSHHHHHHHHHCT--TEECCSHHHHHHHH
T ss_pred             ccccccccccHHHHhhC---hHHHHHHHHHHcCCeeE----ecCCccEEEECCHHHHHHHHhcC--CCCCChhHHHHHHH
Confidence            45678999999998644   78899999999999875    35778999999999999999876  787776 3322224


Q ss_pred             ccCCcCeeecCCchHHHHHHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHHHHHHHHHHHHhhc
Q 047974          109 IFGETGLFNSDFDEWKHQRKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLLKRTTFDFACLIAT  188 (497)
Q Consensus       109 ~~g~~~l~~~~~~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~v~~~~~f  188 (497)
                      +.|. +++..+|+.|+++|++++++|++++++.+.+ .+.+. .+.+.+.+.     ++.+|+.+.+..+++++++.++|
T Consensus        74 ~~g~-~l~~~~g~~h~~~R~~~~~~fs~~~l~~~~~-~i~~~-~~~l~~~l~-----~~~~dl~~~~~~~~~~vi~~~~f  145 (389)
T 1n97_A           74 LTGR-GLLTDWGESWKEARKALKDPFLPKNVRGYRE-AMEEE-ARAFFGEWR-----GEERDLDHEMLALSLRLLGRALF  145 (389)
T ss_dssp             HHCS-STTTCCHHHHHHHHHHHCGGGSHHHHHTTHH-HHHHH-HHHHHHTCC-----SCCEEHHHHHHHHHHHHHHHHHH
T ss_pred             HhCC-ccccCCcHHHHHHHHHhCcccCHHHHHHHHH-HHHHH-HHHHHHHcc-----CCcCcHHHHHHHHHHHHHHHHHc
Confidence            5576 8888999999999999999999999988654 45554 344444443     46899999999999999999999


Q ss_pred             CCCCCCCCCCCCCCChHHHHHHHHHHHHHHHH----------HHHHHhHHHHHHHHHHHHHHHHHHHHHhccccccccch
Q 047974          189 GHNPNSLSVGFPEMGFPDAVDDACEAILIRHL----------EKKLANGWRTIDQFWEKQKSMKQEEIEKGMEAKEDEGI  258 (497)
Q Consensus       189 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  258 (497)
                      |.+++  +      .+.+.+..+........+          .++..++.+.+.+++.+.+++                 
T Consensus       146 G~~~~--~------~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~-----------------  200 (389)
T 1n97_A          146 GKPLS--P------SLAEHALKALDRIMAQTRSPLALLDLAAEARFRKDRGALYREAEALIVH-----------------  200 (389)
T ss_dssp             SSCCC--H------HHHHHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHHHHHHHGGGTTS-----------------
T ss_pred             CCcch--H------HHHHHHHHHHHHHHHHHhhHHHhcCCchhHHHHHHHHHHHHHHHHHHHH-----------------
Confidence            99875  1      344444443332211100          011111111222211111110                 


Q ss_pred             hhHHHHHhcCCCCCCCCCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhhcccCCCCCCCCCCh
Q 047974          259 YSLLNCYLSGHEVTGPTPAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRNFSQEGFNKPPLVRL  338 (497)
Q Consensus       259 ~dll~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~  338 (497)
                      .     ++       ..++++++.+++..+++||+|||+++++|++++|++||++|+++++|++.+.             
T Consensus       201 r-----ll-------~~l~~~~l~~~~~~~~~aG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~~~~-------------  255 (389)
T 1n97_A          201 P-----PL-------SHLPRERALSEAVTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEAAL-------------  255 (389)
T ss_dssp             T-----TG-------GGSCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTCHHHHHHHHHCHHHHH-------------
T ss_pred             H-----hc-------ccCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHH-------------
Confidence            0     12       1378999999999999999999999999999999999999999999999764             


Q ss_pred             hhhhcchhHHHHHHHhhcCCCCCCcccccccCCCcccCCeeeCCCcEEEEeccccccCCCCCCCCCCCCCCCCccCCCCC
Q 047974          339 NELNKLVYLHAALCETLRLYPPVPFEIRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWGEDCREFKPERWITEDGR  418 (497)
Q Consensus       339 ~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~  418 (497)
                                |||+|+||++|+++...|.+.+|.++ +||.|||||.|.++.+++|||  +| +||++|+||||++++  
T Consensus       256 ----------a~i~E~lRl~p~~~~~~R~~~~d~~l-~g~~Ip~Gt~V~~~~~~~~rd--~~-~dp~~F~PeR~l~~~--  319 (389)
T 1n97_A          256 ----------AAFQEALRLYPPAWILTRRLERPLLL-GEDRLPPGTTLVLSPYVTQRL--HF-PDGEAFRPERFLEER--  319 (389)
T ss_dssp             ----------HHHHHHHHHSCSSCCEEEEESSCEEE-TTEEECTTCEEEECHHHHHHH--SS-TTTTSCCTTHHHHSC--
T ss_pred             ----------HHHHHHHhcCCCccccceeeCCCceE-CCEEeCCCCEEEECHHHHhhh--cC-CCccccCCccCCCCC--
Confidence                      99999999999999888888877666 999999999999999999999  99 999999999998651  


Q ss_pred             ccCCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCccceeeeeEEEeecCceEEEEEecCC
Q 047974          419 IRHEPPHKFFSFNAGPRICIGKDIAFTLMKATAASIIHNYDVQVVKNHPVTYNLSIGFRMKHGLLARVSKRSA  491 (497)
Q Consensus       419 ~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  491 (497)
                        ...+..|+|||+|+|.|+|++||++|++++++.|+++|++++.++.+.  ..+.+.+|..+++|++++|.+
T Consensus       320 --~~~~~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~--~~~~~~~p~~~~~v~~~~~~~  388 (389)
T 1n97_A          320 --GTPSGRYFPFGLGQRLCLGRDFALLEGPIVLRAFFRRFRLDPLPFPRV--LAQVTLRPEGGLPARPREEVR  388 (389)
T ss_dssp             --CCCBTTBCTTCCSTTCCTTHHHHHHHHHHHHHHHHTTCBCCCCCCCCE--EESSSEEETTCCEECCBC---
T ss_pred             --CCCCCCccCCCCCCCCCchHHHHHHHHHHHHHHHHHhceEEeCCCCcc--cceEEeeeCCCceEEEeeccc
Confidence              124568999999999999999999999999999999999998765543  456677888899999998754


No 30 
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A*
Probab=100.00  E-value=3.4e-61  Score=463.08  Aligned_cols=399  Identities=13%  Similarity=0.139  Sum_probs=309.6

Q ss_pred             CCCCCcccchhhHHHHhhccchHHHHHHHHHHHh-CCeeEEeeecccCcceEEEcChhhHHHhhhcCCccccCCccccc-
Q 047974           28 NPTPWNLPLLGMLASVILNINQLHDKVAQILEKT-KGSFMIKGSWVAQYDMFLTSDPANVQHIMSTNFSKYHKGSEGRK-  105 (497)
Q Consensus        28 ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~k~-g~v~~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~~~~~~~~~-  105 (497)
                      ||||   |++||++++..+   ++.++.+++++| ||||++   .+++.+.+++++|+.++ ++.+. ..|.+.+.+.. 
T Consensus         4 pPg~---P~iG~~~~~~~~---p~~~~~~l~~~y~gpv~~~---~~~g~~~~vv~~~~~~~-~l~~~-~~f~~~~~~~~~   72 (415)
T 3awm_A            4 TPHT---KGPDETLSLLAD---PYRFISRQCQRLGANAFES---RFLLKKTNCLKGAKAAE-IFYDT-TRFEREGAMPVA   72 (415)
T ss_dssp             --------CCCCHHHHHHS---TTTHHHHHHHHHTSSEEEE---EETTEEEEEEESHHHHH-HHTCT-TTEECTTCSCHH
T ss_pred             CCCC---CccchHHHHHhC---hHHHHHHHHHHhCCCeEEE---ecCCCcEEEEeCHHHHH-HHhcc-cccccccccchh
Confidence            5665   899999999765   677899999999 799998   77788999999999987 66654 46766543321 


Q ss_pred             cc-cccCCcCeeecCCchHHHHHHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHHHHHHHHHHH
Q 047974          106 RF-DIFGETGLFNSDFDEWKHQRKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLLKRTTFDFAC  184 (497)
Q Consensus       106 ~~-~~~g~~~l~~~~~~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~v~~  184 (497)
                      .. .++|..+++..+++.|+++|++++++|+++.++.+.+ .+.+. .+.+.+.+..    ++.+|+.+.+..+++++++
T Consensus        73 ~~~~~~g~~~l~~~dg~~h~~~R~~~~~~fs~~~l~~~~~-~i~~~-~~~ll~~~~~----~~~vdl~~~~~~~~~~vi~  146 (415)
T 3awm_A           73 IQKTLLGQGGVQGLDGETHRHRKQMFMGLMTPERVRALAQ-LFEAE-WRRAVPGWTR----KGEIVFYDELHEPLTRAVC  146 (415)
T ss_dssp             HHTTTSCSSSGGGCCHHHHHHHHHHHHTTCCHHHHHHHHH-HHHHH-HHHHHHHHHH----HSEEEHHHHHHHHHHHHHH
T ss_pred             hhhhccCCcceeecCcHHHHHHHHHHHHhcCHHHHHHHHH-HHHHH-HHHHHHhhcc----CCcEeHHHHHHHHHHHHHH
Confidence            22 4566447888999999999999999999999998754 45555 4455555543    3579999999999999999


Q ss_pred             HhhcCCCCCCCCCCCCCCChHHHHHHHHHHHH----HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccccccccchhh
Q 047974          185 LIATGHNPNSLSVGFPEMGFPDAVDDACEAIL----IRHLEKKLANGWRTIDQFWEKQKSMKQEEIEKGMEAKEDEGIYS  260 (497)
Q Consensus       185 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~d  260 (497)
                      .+ ||.+.+..       .+.+....+.....    ......+..++.+.+.+++.+.|+++++....       ...+|
T Consensus       147 ~~-~G~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~-------~~~~d  211 (415)
T 3awm_A          147 AW-AGVPLPDD-------EAGNRAGELRALFDAAGSASPRHLWSRLARRRVDAWAKRIIEGIRAGSIG-------SGSGT  211 (415)
T ss_dssp             HH-HTCCCCGG-------GHHHHHHHHHHHHHSTTCSSHHHHHHHHHHHHHHHHHHHHHHHHHHTSSC-------CCTTS
T ss_pred             HH-cCCCCCcc-------hHHHHHHHHHHHHHHhcccCchHHHHHHHHHHHHHHHHHHHHHHHHhhhc-------CCCCC
Confidence            98 79876431       12222222111110    00112445677888899999999888753211       23568


Q ss_pred             HHHHHhcCCCCCCCCCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhhcccCCCCCCCCCChhh
Q 047974          261 LLNCYLSGHEVTGPTPAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRNFSQEGFNKPPLVRLNE  340 (497)
Q Consensus       261 ll~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~  340 (497)
                      +++.++...++++..++++++..++.. ++||++||+++++|++++|++||++|+++++|                    
T Consensus       212 ~l~~ll~~~~~~g~~~~~~~~~~~~~~-~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~e--------------------  270 (415)
T 3awm_A          212 AAYAIAWHRDRHDDLLSPHVAAVELVN-VLRPTVAIAVYITFVAHALQTCSGIRAALVQQ--------------------  270 (415)
T ss_dssp             HHHHHHHCBCTTSCBCCHHHHHHHHHH-HHHHHHTHHHHHHHHHHHHHHSTTHHHHHHHC--------------------
T ss_pred             HHHHHHhhhhccCCCCCHHHHHHHHHH-HHHhhhhHHHHHHHHHHHHHhChHHHHHHHHH--------------------
Confidence            999999875555566888888877765 45999999999999999999999999999985                    


Q ss_pred             hhcchhHHHHHHHhhcCCCCCCcccccccCCCcccCCeeeCCCcEEEEeccccccCCCCCCCCCCCCCCCCccCCCCCcc
Q 047974          341 LNKLVYLHAALCETLRLYPPVPFEIRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWGEDCREFKPERWITEDGRIR  420 (497)
Q Consensus       341 l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~  420 (497)
                         +||+++||+|+||++|+++...|.+.+|.++ +||.||||+.|+++.+++||||++| +||++|||+||++.+.   
T Consensus       271 ---~~~l~a~i~E~lRl~p~~~~~~R~~~~d~~l-~G~~ip~G~~V~~~~~~~~rdp~~~-~dp~~F~P~R~~~~~~---  342 (415)
T 3awm_A          271 ---PDYAELFVQEVRRFYPFFPAVVARASQDFEW-EGMAFPEGRQVVLDLYGSNHDAATW-ADPQEFRPERFRAWDE---  342 (415)
T ss_dssp             ---TTHHHHHHHHHHHHSCCSCEEEEEESSCEEE-TTEEECTTCEEEEEHHHHHTCHHHH-SSTTSCCGGGGGGCCC---
T ss_pred             ---HHHHHHHHHHHhhcCCCccccceeecCCeEE-CCEEECCCCEEEeCchhhcCCcccc-CCccccChhhcCCCCC---
Confidence               4699999999999999999988888877777 9999999999999999999999999 9999999999997531   


Q ss_pred             CCCCCcccccCCC----CCCCcchHHHHHHHHHHHHHHHhhceEEeecCccceeeeeEEEeecCceEEEEEec
Q 047974          421 HEPPHKFFSFNAG----PRICIGKDIAFTLMKATAASIIHNYDVQVVKNHPVTYNLSIGFRMKHGLLARVSKR  489 (497)
Q Consensus       421 ~~~~~~~~~Fg~G----~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  489 (497)
                        .+..|+|||+|    +|.|+|++||++|++++++.|+++|++++.++.........+..|++++++++++.
T Consensus       343 --~~~~~~~FG~G~r~~~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  413 (415)
T 3awm_A          343 --DSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVPDQDLSIDFARLPALPKSGFVMRNVHI  413 (415)
T ss_dssp             --CSSSCCTTCCSCTTTSCCCTTHHHHHHHHHHHHHHHHHTCEEECCSCCCCBCTTSSSCCBTTCCEEEEEES
T ss_pred             --CCCCccCCCCCCCCCCCcCchHHHHHHHHHHHHHHHHHhcEEEeCCCCCCcCcCCCccccCCCceEEEEeC
Confidence              45689999999    59999999999999999999999999998764322122346678888999999853


No 31 
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A*
Probab=100.00  E-value=7e-61  Score=459.22  Aligned_cols=371  Identities=12%  Similarity=0.084  Sum_probs=286.7

Q ss_pred             cCCCCCcccchhhHHHHhhccchHHHHHHHHHHHhCCeeEEeeeccc-CcceEEEcChhhHHHhhhcCC-ccccCCcccc
Q 047974           27 INPTPWNLPLLGMLASVILNINQLHDKVAQILEKTKGSFMIKGSWVA-QYDMFLTSDPANVQHIMSTNF-SKYHKGSEGR  104 (497)
Q Consensus        27 ~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~k~g~v~~~~~~~~~-~~~~v~v~~p~~v~~il~~~~-~~~~~~~~~~  104 (497)
                      +||||+++|++|++.+      +++..+.+++ +||||+++   .++ |.+.++|++++.+++++.++. ..+..++.+.
T Consensus         2 ~pPGp~~~P~~g~~~~------~p~~~~~~l~-~~Gpv~~~---~~~~g~~~~vv~~~~~v~~vl~~~~~~~~~~r~~~~   71 (404)
T 1jfb_A            2 MASGAPSFPFSRASGP------EPPAEFAKLR-ATNPVSQV---KLFDGSLAWLVTKHKDVCFVATSEKLSKVRTRQGFP   71 (404)
T ss_dssp             ----CCBSSCCCSSTT------SCCTHHHHHH-HHCSEEEE---ECTTSCEEEEECSHHHHHHHHHCTTEECCTTSTTCC
T ss_pred             CCCCCCCCCCCCCcCC------CccHHHHHHH-HhCCeeee---ecCCCCceEEEecHHHHHHHHcCCcccccccccCCc
Confidence            5999999999999754      3566777774 69999988   543 567788999999999998752 1222222221


Q ss_pred             ccc-----cccCCcCeeecCCchHHHHHHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHHHHHH
Q 047974          105 KRF-----DIFGETGLFNSDFDEWKHQRKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLLKRTT  179 (497)
Q Consensus       105 ~~~-----~~~g~~~l~~~~~~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~  179 (497)
                      ...     ...|..+++..+|+.|+++||+++++|++++++.+. +.+++. .+.+.+.+.+...+++++|+.+.+...+
T Consensus        72 ~~~~~~~~~~~~~~~l~~~~g~~h~~~R~~~~~~fs~~~l~~~~-~~i~~~-~~~l~~~l~~~~~~~~~~d~~~~~~~~~  149 (404)
T 1jfb_A           72 ELSASGKQAAKAKPTFVDMDPPEHMHQRSMVEPTFTPEAVKNLQ-PYIQRT-VDDLLEQMKQKGCANGPVDLVKEFALPV  149 (404)
T ss_dssp             CCSHHHHHHTTSCCCGGGCCTTHHHHHHTTTGGGGSHHHHHHHH-HHHHHH-HHHHHHHHHHHCSTTSCEEHHHHTTTHH
T ss_pred             cccccccchhcccCcccccCchhHHHHHHHhhhhcCHHHHHHHH-HHHHHH-HHHHHHHHHhcCCCCCCccHHHHHHHHH
Confidence            111     123333688889999999999999999999998875 445555 4666666655433456799999999999


Q ss_pred             HHHHHHhhcCCCCCCCCCCCCCCChHHHHHHHHHHHHHH-HHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccccccccch
Q 047974          180 FDFACLIATGHNPNSLSVGFPEMGFPDAVDDACEAILIR-HLEKKLANGWRTIDQFWEKQKSMKQEEIEKGMEAKEDEGI  258 (497)
Q Consensus       180 ~~v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  258 (497)
                      .++++..+||.+.+.       ..+.+..   ....... ...+...++.+.+.+++.+.|+++++           ...
T Consensus       150 ~~~i~~~~~G~~~~~-------~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~-----------~~~  208 (404)
T 1jfb_A          150 PSYIIYTLLGVPFND-------LEYLTQQ---NAIRTNGSSTAREASAANQELLDYLAILVEQRLV-----------EPK  208 (404)
T ss_dssp             HHHHHHHHHTCCGGG-------HHHHHHH---HHHHHCTTSCHHHHHHHHHHHHHHHHHHHHHHHH-----------SCC
T ss_pred             HHHHHHHHcCCCHHH-------HHHHHHH---HHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHh-----------CCC
Confidence            999999999986531       1122221   1111100 01345566777888888888887764           224


Q ss_pred             hhHHHHHhcCCCCCCCCCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhhcccCCCCCCCCCCh
Q 047974          259 YSLLNCYLSGHEVTGPTPAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRNFSQEGFNKPPLVRL  338 (497)
Q Consensus       259 ~dll~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~  338 (497)
                      +|+++.+++...+ +..++++++.+++..+++||+|||+++++|++++|++||++|++++++                  
T Consensus       209 ~d~l~~ll~~~~~-~~~l~~~ei~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~~------------------  269 (404)
T 1jfb_A          209 DDIISKLCTEQVK-PGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKAN------------------  269 (404)
T ss_dssp             SSHHHHHHHHTTT-TTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHC------------------
T ss_pred             CcHHHHHHHhhcc-CCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHhC------------------
Confidence            6899999965432 245899999999999999999999999999999999999999999982                  


Q ss_pred             hhhhcchhHHHHHHHhhcCCCCCC-cccccccCCCcccCCeeeCCCcEEEEeccccccCCCCCCCCCCCCCCCCccCCCC
Q 047974          339 NELNKLVYLHAALCETLRLYPPVP-FEIRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWGEDCREFKPERWITEDG  417 (497)
Q Consensus       339 ~~l~~lp~l~a~i~E~lRl~p~~~-~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~  417 (497)
                           .+|++|||+|+||++|+++ ...|.+.+|.++ +||.|||||.|+++.+++||||++| +||++|+||||++.  
T Consensus       270 -----~~yl~a~i~E~lRl~p~~~~~~~R~~~~d~~~-~g~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeRf~~~--  340 (404)
T 1jfb_A          270 -----PSLAPQFVEELCRYHTASALAIKRTAKEDVMI-GDKLVRANEGIIASNQSANRDEEVF-ENPDEFNMNRKWPP--  340 (404)
T ss_dssp             -----GGGHHHHHHHHHHHSCSCCSCCEEEESSCEEE-TTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTCCCCS--
T ss_pred             -----hHhHHHHHHHHHhhCCCccccceeeeCCCeeE-CCEEECCCCEEEeCHHhhCCCchhC-CChhhcCCCCCCCC--
Confidence                 2599999999999999999 567777777666 9999999999999999999999999 99999999999753  


Q ss_pred             CccCCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhc-eEEeecC
Q 047974          418 RIRHEPPHKFFSFNAGPRICIGKDIAFTLMKATAASIIHNY-DVQVVKN  465 (497)
Q Consensus       418 ~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f-~~~~~~~  465 (497)
                             ..++|||+|+|.|+|++||++|++++++.|+++| ++++.++
T Consensus       341 -------~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~  382 (404)
T 1jfb_A          341 -------QDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKFPDLKVAVP  382 (404)
T ss_dssp             -------SCCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHCTTCEESSC
T ss_pred             -------CCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHCCCceecCC
Confidence                   2499999999999999999999999999999999 7998653


No 32 
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1
Probab=100.00  E-value=3.3e-61  Score=460.61  Aligned_cols=381  Identities=14%  Similarity=0.158  Sum_probs=298.4

Q ss_pred             hccCCCCCcccchhhHHHHhhccchHHHHHHHHHHHhCCeeEEeeec----c-cC-cceEEEcChhhHHHhh-hcCCccc
Q 047974           25 RKINPTPWNLPLLGMLASVILNINQLHDKVAQILEKTKGSFMIKGSW----V-AQ-YDMFLTSDPANVQHIM-STNFSKY   97 (497)
Q Consensus        25 ~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~k~g~v~~~~~~~----~-~~-~~~v~v~~p~~v~~il-~~~~~~~   97 (497)
                      .++||||+++|+.     +..   +++.++.++ ++||+||++   +    + ++ .++++++||+.+++|+ .++  .+
T Consensus         9 ~~lppgp~~~p~~-----~~~---~p~~~~~~l-~~yGpv~~~---~~~~~~~~~~~~~vvv~~~~~i~~vl~~~~--~~   74 (406)
T 1ued_A            9 APLLREPANFQLR-----TNC---DPHEDNFGL-RAHGPLVRI---VGESSTQLGRDFVWQAHGYEVVRRILGDHE--HF   74 (406)
T ss_dssp             CCEEECCTTTTCE-----ETT---EECHHHHHH-HTTCSEEEE---ESHHHHHTTSSCEEEECSHHHHHHHHHCCS--SE
T ss_pred             CCCcccCcccCCC-----CCC---CcHHHHHHH-HHhCCeeee---cccccCCCCCccEEEEcCHHHHHHHHhhCc--cc
Confidence            4589999999987     322   367788888 999999999   7    6 77 8999999999999999 553  35


Q ss_pred             cCCccc--c--ccc-c-ccCCcCeeecCCchHHHHHHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeH
Q 047974           98 HKGSEG--R--KRF-D-IFGETGLFNSDFDEWKHQRKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDF  171 (497)
Q Consensus        98 ~~~~~~--~--~~~-~-~~g~~~l~~~~~~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl  171 (497)
                      .+++..  .  ... . ..+. +++..+|+.|+++|++++++|+++.++.+. +.+.+. .+.+.+.+..   .++.+|+
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~-~l~~~~g~~~~~~R~~~~~~fs~~~l~~~~-~~i~~~-~~~l~~~l~~---~g~~~d~  148 (406)
T 1ued_A           75 TTRPQFTQSKSGAHVEAQFVG-QISTYDPPEHTRLRKMLTPEFTVRRIRRME-PAIQSL-IDDRLDLLEA---EGPSADL  148 (406)
T ss_dssp             ECCCCC---------CGGGTT-CGGGCCTTHHHHHHHHHGGGSSHHHHHHHH-HHHHHH-HHHHHHHHHH---HCTTEEH
T ss_pred             ccccccccccccccccccccc-ccccCCCHHHHHHHHHhhhhhCHHHHHHHH-HHHHHH-HHHHHHHHHh---cCCCeeH
Confidence            555431  1  111 1 1344 788889999999999999999999998875 445555 4555555542   2457999


Q ss_pred             HHHHHH-HHHHHHHHhhcCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhcc
Q 047974          172 QDLLKR-TTFDFACLIATGHNPNSLSVGFPEMGFPDAVDDACEAILIRHLEKKLANGWRTIDQFWEKQKSMKQEEIEKGM  250 (497)
Q Consensus       172 ~~~~~~-~~~~v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  250 (497)
                      .+.+.. ++.++++. +||.+.+.      ...+.+.+..+....   ...+...++.+.+.+++.+.|+++++.     
T Consensus       149 ~~~~~~~~~~~vi~~-~~G~~~~~------~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~~r~~~-----  213 (406)
T 1ued_A          149 QGLFADPVGAHALCE-LLGIPRDD------QREFVRRIRRNADLS---RGLKARAADSAAFNRYLDNLLARQRAD-----  213 (406)
T ss_dssp             HHHTHHHHHHHHHHH-HHTCCHHH------HHHHHHHHHHCC------CCHHHHHHHHHHHHHHHHHHHHHHHHS-----
T ss_pred             HHHHHHHhHHHHHHH-HcCCCHHH------HHHHHHHHHHHHhcc---CCHHHHHHHHHHHHHHHHHHHHHHHhC-----
Confidence            998875 99999994 78975321      112222222221100   012455667788888888888877641     


Q ss_pred             ccccccchhhHHHHHhcCCCCCCCCCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhhcccCCC
Q 047974          251 EAKEDEGIYSLLNCYLSGHEVTGPTPAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRNFSQEGF  330 (497)
Q Consensus       251 ~~~~~~~~~dll~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~  330 (497)
                            ...|+++.+++..   +..++++++.+++..+++||+|||+.+++|++++|++||++|+++++|++        
T Consensus       214 ------~~~d~l~~ll~~~---~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~~--------  276 (406)
T 1ued_A          214 ------PDDGLLGMIVRDH---GDNVTDEELKGLCTALILGGVETVAGMIGFGVLALLDNPGQIELLFESPE--------  276 (406)
T ss_dssp             ------CCSSHHHHHHHHH---GGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSGGGTTHHHHCHH--------
T ss_pred             ------CCCCHHHHHHHhc---CCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhChHHHHHHHhCHH--------
Confidence                  2368999998764   24589999999999999999999999999999999999999999999865        


Q ss_pred             CCCCCCChhhhhcchhHHHHHHHhhcCCCCCCc-ccccccCCCcccCCeeeCCCcEEEEeccccccCCCCCCCCCCCCCC
Q 047974          331 NKPPLVRLNELNKLVYLHAALCETLRLYPPVPF-EIRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWGEDCREFKP  409 (497)
Q Consensus       331 ~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~-~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P  409 (497)
                                     |++|||+|+||++|+++. ..|.+.+|.++ +||.|||||.|+++.+++||||++| +||++|+|
T Consensus       277 ---------------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~-~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dp~~F~P  339 (406)
T 1ued_A          277 ---------------KAERVVNELVRYLSPVQAPNPRLAIKDVVI-DGQLIKAGDYVLCSILMANRDEALT-PDPDVLDA  339 (406)
T ss_dssp             ---------------HHHHHHHHHHHHHCSSCSCSCEEESSCEEE-TTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCT
T ss_pred             ---------------HHHHHHHHHHhcCCCcccCcceecCCCEEE-CCEEECCCCEEEecHHHhcCCchhC-CChhhcCC
Confidence                           688999999999999996 67888877666 9999999999999999999999999 99999999


Q ss_pred             CCccCCCCCccCCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhc-eEEeecC-ccceeeeeEEEeecCceEEEE
Q 047974          410 ERWITEDGRIRHEPPHKFFSFNAGPRICIGKDIAFTLMKATAASIIHNY-DVQVVKN-HPVTYNLSIGFRMKHGLLARV  486 (497)
Q Consensus       410 ~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  486 (497)
                      |||           ...++|||+|+|.|+|++||++|++++++.|+++| ++++.++ .+.......++++ .+++|++
T Consensus       340 eR~-----------~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~-~~lpv~~  406 (406)
T 1ued_A          340 NRA-----------AVSDVGFGHGIHYCVGAALARSMLRMAYQTLWRRFPGLRLAVPIEEVKYRSAFVDCP-DQVPVTW  406 (406)
T ss_dssp             TSC-----------CCCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCBCCSSSCCB-SCCEEEC
T ss_pred             CCC-----------CCCCCCCCCCCcCCCcHHHHHHHHHHHHHHHHHhCCCceecCCcccccccccccccC-CeeeeeC
Confidence            997           23689999999999999999999999999999999 7999753 3344455566777 8888764


No 33 
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ...
Probab=100.00  E-value=7.5e-61  Score=458.46  Aligned_cols=394  Identities=12%  Similarity=0.075  Sum_probs=305.7

Q ss_pred             hccCCCCCcccch--hhHHHHhhc--cchHHHHHHHHHHHhC--CeeEEeeec-ccCcceEEEcChhhHHHhhhcCCccc
Q 047974           25 RKINPTPWNLPLL--GMLASVILN--INQLHDKVAQILEKTK--GSFMIKGSW-VAQYDMFLTSDPANVQHIMSTNFSKY   97 (497)
Q Consensus        25 ~~~ppgp~~~P~~--G~~~~~~~~--~~~~~~~~~~~~~k~g--~v~~~~~~~-~~~~~~v~v~~p~~v~~il~~~~~~~   97 (497)
                      .++||||++.|..  +.+-.+...  ..+++.++.+++ +||  +||++   + +|  +.++++|++++++++++. ..|
T Consensus        10 ~~~~~~p~~~p~~~~~~~~~~~~~~~~~~p~~~~~~l~-~~G~~pv~~~---~~~g--~~vvv~~~~~v~~vl~~~-~~f   82 (415)
T 2zwu_A           10 ANLAPLPPHVPEHLVFDFDMYNPSNLSAGVQEAWAVLQ-ESNVPDLVWT---RCNG--GHWIATRGQLIREAYEDY-RHF   82 (415)
T ss_dssp             -CCCCCCTTSCGGGBCCCCTTSCTTGGGCHHHHHHGGG-STTSCSEEEE---CGGG--CEEEECSHHHHHHHHHCT-TTE
T ss_pred             cccCCCCCCCCcccccccCcCChhhcccChHHHHHHHH-hcCCCCeEEe---cCCC--CeEEEcCHHHHHHHHcCc-ccc
Confidence            4599999999874  432111111  235788888885 899  99988   6 44  799999999999999764 568


Q ss_pred             cCCc-cccccccccCCcC-eeecCCchHHHHHHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHH
Q 047974           98 HKGS-EGRKRFDIFGETG-LFNSDFDEWKHQRKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLL  175 (497)
Q Consensus        98 ~~~~-~~~~~~~~~g~~~-l~~~~~~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~  175 (497)
                      .+++ .+......+|. + ++..+|+.|+++|+++.++|++..++.+. ..+.+. .+.+.+.+..   . +.+|+.+.+
T Consensus        83 ~~~~~~~~~~~~~~~~-~~l~~~~g~~~~~~R~~~~~~f~~~~l~~~~-~~i~~~-~~~l~~~l~~---~-~~~d~~~~~  155 (415)
T 2zwu_A           83 SSECPFIPREAGEAYD-FIPTSMDPPEQRQFRALANQVVGMPVVDKLE-NRIQEL-ACSLIESLRP---Q-GQCNFTEDY  155 (415)
T ss_dssp             ETTSCSSSHHHHHHCC-CTTTTCCTTTTHHHHHHHHHHHSHHHHHHHH-HHHHHH-HHHHHHHHGG---G-TEEEHHHHT
T ss_pred             CCCcccCCCCcccccc-ccCccCCCcHHHHHHHHHHhhhCHHHHHHHH-HHHHHH-HHHHHHHHHh---c-CCccHHHHH
Confidence            7776 22211122355 6 88889999999999999999999998875 445555 4555555543   2 379999865


Q ss_pred             -HHHHHHHHHHhhcCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhcccccc
Q 047974          176 -KRTTFDFACLIATGHNPNSLSVGFPEMGFPDAVDDACEAILIRHLEKKLANGWRTIDQFWEKQKSMKQEEIEKGMEAKE  254 (497)
Q Consensus       176 -~~~~~~v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  254 (497)
                       ..+++++++.+ ||.+.+.      ...+.+....+.... ..  . +..++.+.+.+++.+.|+++++          
T Consensus       156 ~~~~~~~vi~~~-~G~~~~~------~~~~~~~~~~~~~~~-~P--~-~~~~~~~~~~~~~~~~i~~r~~----------  214 (415)
T 2zwu_A          156 AEPFPIRIFMLL-AGLPEED------IPHLKYLTDQMTRPD-GS--M-TFAEAKEALYDYLIPIIEQRRQ----------  214 (415)
T ss_dssp             TTHHHHHHHHHH-HTCCGGG------HHHHHHHHHHHHSCC-SS--S-CHHHHHHHHHHHHHHHHHHHHH----------
T ss_pred             HHHHHHHHHHHH-cCCCHHH------HHHHHHHHHHHHhcc-CH--H-HHHHHHHHHHHHHHHHHHHHHh----------
Confidence             78999999998 9986531      112222222211100 00  0 3456677888888888888765          


Q ss_pred             ccchhhHHHHHhcCCCCCCCCCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhhcccCCCCCCC
Q 047974          255 DEGIYSLLNCYLSGHEVTGPTPAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRNFSQEGFNKPP  334 (497)
Q Consensus       255 ~~~~~dll~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~  334 (497)
                       ....|+++.+++... ++..++++++..++..+++||+|||+.+++|++++|++||++|+++++|++            
T Consensus       215 -~~~~dll~~ll~~~~-~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~------------  280 (415)
T 2zwu_A          215 -KPGTDAISIVANGQV-NGRPITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELIERPE------------  280 (415)
T ss_dssp             -SCCSSHHHHHHTCEE-TTEECCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHCHHHHHHHHHCGG------------
T ss_pred             -CCCCCHHHHHHHhhh-cCCCCCHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHhCHHHHHHHHhCHH------------
Confidence             124689999997743 234589999999999999999999999999999999999999999999854            


Q ss_pred             CCChhhhhcchhHHHHHHHhhcCCCCCCcccccccCCCcccCCeeeCCCcEEEEeccccccCCCCCCCCCCCCCCCCccC
Q 047974          335 LVRLNELNKLVYLHAALCETLRLYPPVPFEIRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWGEDCREFKPERWIT  414 (497)
Q Consensus       335 ~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~  414 (497)
                                 |++|||+|+||++|+++.. |.+.+|.++ +||.|||||.|+++.+++||||++| +||++|+||||- 
T Consensus       281 -----------~l~a~i~E~lRl~p~~~~~-R~~~~d~~~-~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~-  345 (415)
T 2zwu_A          281 -----------RIPAACEELLRRFSLVADG-RILTSDYEF-HGVQLKKGDQILLPQMLSGLDEREN-ACPMHVDFSRQK-  345 (415)
T ss_dssp             -----------GHHHHHHHHHHHTCCBCCE-EEESSCEEE-TTEEECTTCEEECCHHHHHHCTTTS-SSTTSCCTTCSS-
T ss_pred             -----------HHHHHHHHHHhhcCCcCCc-eeeCCCEEE-CCEEECCCCEEEeCchhhCCCchhC-CCccccCCCCCC-
Confidence                       7999999999999999987 888887666 9999999999999999999999999 999999999951 


Q ss_pred             CCCCccCCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhce-EEeecCccceeeeeEEEeecCceEEEEEecCCCC
Q 047974          415 EDGRIRHEPPHKFFSFNAGPRICIGKDIAFTLMKATAASIIHNYD-VQVVKNHPVTYNLSIGFRMKHGLLARVSKRSAQP  493 (497)
Q Consensus       415 ~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~  493 (497)
                                ..|+|||+|+|.|+|++||++|++++++.|+++|+ +++.++.... ....+.++..+++|+++||..++
T Consensus       346 ----------~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~-~~~~~~~~~~~lpv~~~~r~~~~  414 (415)
T 2zwu_A          346 ----------VSHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGAQIQ-HKSGIVSGVQALPLVWDPATTKA  414 (415)
T ss_dssp             ----------CCCCTTCCGGGCCSSHHHHHHHHHHHHHHHHHHCCSCEECTTCCCC-EECSSBCEESCCEEECCGGGCCC
T ss_pred             ----------CCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCCCEECCCcccc-cCCccccCcceeEEEEecCCCCC
Confidence                      35899999999999999999999999999999998 9998733221 34455667788999999998653


No 34 
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A*
Probab=100.00  E-value=2.1e-59  Score=449.19  Aligned_cols=372  Identities=16%  Similarity=0.174  Sum_probs=290.1

Q ss_pred             hHHHHHHHHHHHhCCeeEEeeecccCcceEEEcChhhHHHhhhcCCccccCCcccccccc--ccCCcCeeecCCchHHHH
Q 047974           49 QLHDKVAQILEKTKGSFMIKGSWVAQYDMFLTSDPANVQHIMSTNFSKYHKGSEGRKRFD--IFGETGLFNSDFDEWKHQ  126 (497)
Q Consensus        49 ~~~~~~~~~~~k~g~v~~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~~~~~~~~~~~~--~~g~~~l~~~~~~~w~~~  126 (497)
                      +++.++.++++ |||| .+     ++.+.++++|++.+++++.++ ..|++++... ...  ..+. +++..+|+.|+++
T Consensus        29 ~p~~~~~~l~~-~gpv-~~-----~~~~~~vv~~~~~v~~vl~~~-~~f~~~~~~~-~~~~~~~~~-~~~~~~g~~~~~~   98 (411)
T 2jjn_A           29 ALLDWLGTMRE-KQPV-WQ-----DRYGVWHVFRHADVQTVLRDT-ATFSSDPTRV-IEGASPTPG-MIHEIDPPEHRAL   98 (411)
T ss_dssp             HHHHHHHHHHH-HCSE-EE-----CTTSCEEECSHHHHHHHHHCT-TTEESCGGGG-STTCCCCTT-CGGGCCTTHHHHH
T ss_pred             ChHHHHHHHHH-hCCc-cc-----CCCCeEEECCHHHHHHHHcCc-ccccCccccc-CCccccccc-ccccCCchHHHHH
Confidence            36777888865 9998 33     445899999999999999875 5687775432 112  2344 7888999999999


Q ss_pred             HHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHH-HHHHHHHHHHHhhcCCCCCCCCCCCCCCChH
Q 047974          127 RKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDL-LKRTTFDFACLIATGHNPNSLSVGFPEMGFP  205 (497)
Q Consensus       127 R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~-~~~~~~~v~~~~~fG~~~~~~~~~~~~~~~~  205 (497)
                      |+++.++|+++.++.+. +.+++.+ +.+.+.      .++.+|+... ...+++++++.+ ||.+.+..      ..+.
T Consensus        99 R~~~~~~fs~~~l~~~~-~~i~~~~-~~ll~~------~~~~~d~~~~~~~~~~~~vi~~~-fG~~~~~~------~~~~  163 (411)
T 2jjn_A           99 RKVVSSAFTPRTISDLE-PRIRDVT-RSLLAD------AGESFDLVDVLAFPLPVTIVAEL-LGLPPMDH------EQFG  163 (411)
T ss_dssp             HHHHHHHSCHHHHHTTH-HHHHHHH-HHHHHT------SCSEEEHHHHTTTHHHHHHHHHH-HTCCSCCC------STTC
T ss_pred             HHHhhhhcCHHHHHHHH-HHHHHHH-HHHHhc------CCCceeHHHHHHHHHHHHHHHHH-cCCCHHHH------HHHH
Confidence            99999999999998764 3454443 333333      2357999955 468999999998 99876432      1222


Q ss_pred             HHHHHHHHHH---HH-HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccccccccchhhHHHHHhcCCCCCCCCCchHHH
Q 047974          206 DAVDDACEAI---LI-RHLEKKLANGWRTIDQFWEKQKSMKQEEIEKGMEAKEDEGIYSLLNCYLSGHEVTGPTPAEKVM  281 (497)
Q Consensus       206 ~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~l~~~~i  281 (497)
                      +....+....   +. ....++..++.+.+.+++.+.|+++++           ...+|+++.+++... ++..++++++
T Consensus       164 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~r~~-----------~~~~d~l~~ll~~~~-~~~~l~~~el  231 (411)
T 2jjn_A          164 DWSGALVDIQMDDPTDPALAERIADVLNPLTAYLKARCAERRA-----------DPGDDLISRLVLAEV-DGRALDDEEA  231 (411)
T ss_dssp             CHHHHHHHSCCSCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------SCCSSHHHHHHHCCB-TTBCCCHHHH
T ss_pred             HHHHHHHhccCccccchHHHHHHHHHHHHHHHHHHHHHHHHHh-----------CCCCCHHHHHHhccc-CCCCCCHHHH
Confidence            2222222110   00 112345667778888899988888765           124689999998754 3456899999


Q ss_pred             HHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhhcccCCCCCCCCCChhhhhcchhHHHHHHHhhcCCCCC
Q 047974          282 RDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRNFSQEGFNKPPLVRLNELNKLVYLHAALCETLRLYPPV  361 (497)
Q Consensus       282 ~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~  361 (497)
                      .+++..+++||+|||+++++|++++|++||++|+++++|++                       |++|||+|+||++|++
T Consensus       232 ~~~~~~~~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E~~-----------------------~l~a~i~E~lRl~p~~  288 (411)
T 2jjn_A          232 ANFSTALLLAGHITTTVLLGNIVRTLDEHPAHWDAAAEDPG-----------------------RIPAIVEEVLRYRPPF  288 (411)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHSTHHHHHHHHCGG-----------------------GHHHHHHHHHHHSCSS
T ss_pred             HHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHH-----------------------hHHHHHHHHhhhCCCc
Confidence            99999999999999999999999999999999999999864                       7999999999999999


Q ss_pred             CcccccccCCCcccCCeeeCCCcEEEEeccccccCCCCCCCCCCCCCCCCccCCCCCccCCCCCcccccCCCCCCCcchH
Q 047974          362 PFEIRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWGEDCREFKPERWITEDGRIRHEPPHKFFSFNAGPRICIGKD  441 (497)
Q Consensus       362 ~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~  441 (497)
                      +...|.+.+|.++ +||.|||||.|+++.+++||||++| +||++|+||||.+         ...++|||+|+|.|+|++
T Consensus       289 ~~~~R~~~~d~~l-~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~~---------~~~~~pFG~G~r~C~G~~  357 (411)
T 2jjn_A          289 PQMQRTTTKATEV-AGVPIPADVMVNTWVLSANRDSDAH-DDPDRFDPSRKSG---------GAAQLSFGHGVHFCLGAP  357 (411)
T ss_dssp             CEEEEEESSCEEE-TTEEECSSCEEEEEHHHHHTCTTTS-SSTTSCCTTCCCS---------SCCCGGGCSSTTCCTTHH
T ss_pred             CCcceEECCCeEE-CCEEECCCCEEEechhhhCCChhhc-CCccccCCCCCCC---------CCCccCCCCCCccCcCHH
Confidence            9877888887666 9999999999999999999999999 9999999999742         136899999999999999


Q ss_pred             HHHHHHHHHHHHHHhhce-EEeecCccceeeeeEEEeecCceEEEEEecCC
Q 047974          442 IAFTLMKATAASIIHNYD-VQVVKNHPVTYNLSIGFRMKHGLLARVSKRSA  491 (497)
Q Consensus       442 ~A~~~~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  491 (497)
                      ||++|++++++.|+++|+ +++.++.+.........+.+.+++|+++||.+
T Consensus       358 lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~lpv~~~~~~r  408 (411)
T 2jjn_A          358 LARLENRVALEEIIARFGRLTVDRDDERLRHFEQIVLGTRHLPVLAGSSPR  408 (411)
T ss_dssp             HHHHHHHHHHHHHHHHHSCCEECCSSCCCCBCCSSSSSBSCCEEECSCCTT
T ss_pred             HHHHHHHHHHHHHHHhCCcceECCCCceeccccccccCcceeEEEecCCCC
Confidence            999999999999999995 99975332211334455667889999999865


No 35 
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A*
Probab=100.00  E-value=2.4e-60  Score=454.14  Aligned_cols=371  Identities=13%  Similarity=0.120  Sum_probs=293.8

Q ss_pred             HHHHHHHHHHHhCCeeEEeeecc-cCcceEEEcChhhHHHhhhcCCccccCCcc--c-cc---cccc-cCCcCeeecCCc
Q 047974           50 LHDKVAQILEKTKGSFMIKGSWV-AQYDMFLTSDPANVQHIMSTNFSKYHKGSE--G-RK---RFDI-FGETGLFNSDFD  121 (497)
Q Consensus        50 ~~~~~~~~~~k~g~v~~~~~~~~-~~~~~v~v~~p~~v~~il~~~~~~~~~~~~--~-~~---~~~~-~g~~~l~~~~~~  121 (497)
                      ++.++.++ ++||+|+++   ++ ++.+.++++||+++++++.++  .|.+++.  + ..   .... .|. +++..+|+
T Consensus        21 p~~~~~~l-~~yGpv~~~---~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~-~l~~~~g~   93 (403)
T 3aba_A           21 PPDGIADI-RAAAPVTRA---TFTSGHEAWLVTGYEEVRALLRDS--SFSVQVPHALHTQDGVVTQKPGRG-SLLWQDEP   93 (403)
T ss_dssp             CCTTHHHH-HHHCSEEEE---ECTTSCEEEEECCHHHHHHHHHCT--TEESCCSCCTTSSSCCCCCCCCTT-CCTTCCTT
T ss_pred             hhHHHHHH-HhcCCeeee---ccCCCceEEEEcCHHHHHHHHcCC--Cccccccccccccccccccccccc-ccccCCch
Confidence            56677888 899999999   86 889999999999999999874  4766632  1 11   1122 345 78889999


Q ss_pred             hHHHHHHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHH-HHHHHHHHHHhhcCCCCCCCCCCCC
Q 047974          122 EWKHQRKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLL-KRTTFDFACLIATGHNPNSLSVGFP  200 (497)
Q Consensus       122 ~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~v~~~~~fG~~~~~~~~~~~  200 (497)
                      .|+++|++++++|+++.++.+. +.+.+. .+.+.+.+.+   .++.+|+...+ ..+++++++. +||.+.+.      
T Consensus        94 ~h~~~R~~~~~~fs~~~l~~~~-~~i~~~-~~~ll~~l~~---~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~------  161 (403)
T 3aba_A           94 EHTSDRKLLAKEFTVRRMQALR-PNIQRI-VDEHLDAIEA---RGGPVDLVKTFANAVPSMVISD-LFGVPVER------  161 (403)
T ss_dssp             HHHHHHHHHHHHSCHHHHHTTH-HHHHHH-HHHHHHHHHH---HCSCEEHHHHTTTHHHHHHHHH-HHTCCGGG------
T ss_pred             hHHHHHHHHHhhcCHHHHHHHH-HHHHHH-HHHHHHHHHh---cCCCccHHHHHHHHHHHHHHHH-HcCCCHHH------
Confidence            9999999999999999998864 445555 4555555543   24679998766 4799999997 68986431      


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccccccccchhhHHHHHhcCCCCCCCCCchHH
Q 047974          201 EMGFPDAVDDACEAILIRHLEKKLANGWRTIDQFWEKQKSMKQEEIEKGMEAKEDEGIYSLLNCYLSGHEVTGPTPAEKV  280 (497)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~l~~~~  280 (497)
                      ...+.+....+..... .  .+...++.+.+.+++.+.|+++++.           ..+|+++.+++..+ ++..+++++
T Consensus       162 ~~~~~~~~~~~~~~~~-~--p~~~~~~~~~~~~~~~~~i~~r~~~-----------~~~dll~~ll~~~~-~~~~l~~~e  226 (403)
T 3aba_A          162 RAEFQDIAEAMMRVDQ-D--AAATEAAGMRLGGLLYQLVQERRAN-----------PGDDLISALITTED-PDGVVDDMF  226 (403)
T ss_dssp             HHHHHHHHHHHSBSSS-C--HHHHHHHHHHHHHHHHHHHHHHHHS-----------CCSSHHHHHHTSCC-TTCCCSHHH
T ss_pred             HHHHHHHHHHHHhccC-c--HHHHHHHHHHHHHHHHHHHHHHHhC-----------CCCCHHHHHHhhcc-CCCCCCHHH
Confidence            1112222221111000 0  1455667788888898888887652           23689999998754 345699999


Q ss_pred             HHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhhcccCCCCCCCCCChhhhhcchhHHHHHHHhhcCCCC
Q 047974          281 MRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRNFSQEGFNKPPLVRLNELNKLVYLHAALCETLRLYPP  360 (497)
Q Consensus       281 i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~  360 (497)
                      +.+++..+++||+|||+++++|++++|++||++|+++++|++                       |++|||+|+||++|+
T Consensus       227 i~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~-----------------------~l~a~i~E~lRl~p~  283 (403)
T 3aba_A          227 LMNAAGTLLIAAHDTTACMIGLGTALLLDSPDQLALLREDPS-----------------------LVGNAVEELLRYLTI  283 (403)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG-----------------------GHHHHHHHHHHHHCS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHhCHH-----------------------HHHHHHHHHHhcCCC
Confidence            999999999999999999999999999999999999999853                       799999999999999


Q ss_pred             CC-cccccccCCCcccCCeeeCCCcEEEEeccccccCCCCCCCCCCCCCCCCccCCCCCccCCCCCcccccCCCCCCCcc
Q 047974          361 VP-FEIRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWGEDCREFKPERWITEDGRIRHEPPHKFFSFNAGPRICIG  439 (497)
Q Consensus       361 ~~-~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G  439 (497)
                      ++ ...|.+.+|.++ +||.|||||.|+++.+++||||++| +||++|+||||.           ..++|||+|+|.|+|
T Consensus       284 ~~~~~~R~~~~d~~~-~g~~Ip~Gt~V~~~~~~~~rdp~~~-~dp~~F~PeR~~-----------~~~l~FG~G~r~C~G  350 (403)
T 3aba_A          284 GQFGGERVATRDVEL-GGVRIAKGEQVVAHVLAADFDPAFV-EEPERFDITRRP-----------APHLAFGFGAHQCIG  350 (403)
T ss_dssp             CTTCEEEEESSCEEE-TTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTSCC-----------CCCSTTCCGGGSCTT
T ss_pred             cccccceEeCCCeEE-CCEEECCCCEEEechhhhCCChhhC-CCccccCCCCCC-----------CCccCCCCCCccCcC
Confidence            99 677888777666 9999999999999999999999999 999999999982           358999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhhc-eEEeecC-ccceeeeeEEEeecCceEEEEEecC
Q 047974          440 KDIAFTLMKATAASIIHNY-DVQVVKN-HPVTYNLSIGFRMKHGLLARVSKRS  490 (497)
Q Consensus       440 ~~~A~~~~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~r~  490 (497)
                      ++||++|++++++.|+++| ++++.++ .+.....+...++..+++|++++|.
T Consensus       351 ~~lA~~e~~~~la~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~~~r~  403 (403)
T 3aba_A          351 QQLARIELQIVFETLFRRLPGLRLAKPVEELRFRHDMVFYGVHELPVTWHHHH  403 (403)
T ss_dssp             HHHHHHHHHHHHHHHHHHSTTCEESSCGGGSCBCTTBSSCCBSCCEEECCCCC
T ss_pred             HHHHHHHHHHHHHHHHHhCCCceecCCccccccccCcccCCcceeEEEecCCC
Confidence            9999999999999999999 6998764 2333444556677889999998874


No 36 
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A*
Probab=100.00  E-value=9.1e-60  Score=451.54  Aligned_cols=387  Identities=12%  Similarity=0.132  Sum_probs=297.0

Q ss_pred             cCCCCCcccchhhHHHHhhccchHHHHHHHHHHHh-CCeeEEeeecc-cCcceEEEcChhhHHHhhhcCCccccCCcc--
Q 047974           27 INPTPWNLPLLGMLASVILNINQLHDKVAQILEKT-KGSFMIKGSWV-AQYDMFLTSDPANVQHIMSTNFSKYHKGSE--  102 (497)
Q Consensus        27 ~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~k~-g~v~~~~~~~~-~~~~~v~v~~p~~v~~il~~~~~~~~~~~~--  102 (497)
                      .||+|+++|.+.....+..   +++.++.++ ++| ||||++   ++ ++.+.++|+||+++++++.++  .+.+.+.  
T Consensus         6 ~~~~~~~~P~~~~~~~~~~---~p~~~~~~l-~~~yGpv~~~---~~~g~~~~vvv~~~~~v~~vl~~~--~~~~~~~~~   76 (412)
T 2zbx_A            6 TTPQTTDAPAFPSNRSCPY---QLPDGYAQL-RDTPGPLHRV---TLYDGRQAWVVTKHEAARKLLGDP--RLSSNRTDD   76 (412)
T ss_dssp             --CCCCSSCBSSCCCSSTT---SCCHHHHHH-HHSSSSEEEE---ECTTSCEEEEECSHHHHHHHHTCT--TEECCTTST
T ss_pred             CCCCCCCCCCCCCCchhcc---ChHHHHHHH-HhcCCCeEee---ccCCCCcEEEEecHHHHHHHHcCc--ccccCcccc
Confidence            6788888886633223322   467788888 788 999999   76 889999999999999999874  3444432  


Q ss_pred             -ccccc----cc--cCCcCeeecCCchHHHHHHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHH
Q 047974          103 -GRKRF----DI--FGETGLFNSDFDEWKHQRKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLL  175 (497)
Q Consensus       103 -~~~~~----~~--~g~~~l~~~~~~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~  175 (497)
                       +....    .+  .+. +++..+|+.|+++|+++++.|+.+.++.+. +.+++. .+.+.+.+..   .++.+|+.+.+
T Consensus        77 ~~~~~~~~~~~~~~~~~-~l~~~~g~~h~~~R~~~~~~fs~~~l~~~~-~~i~~~-~~~l~~~l~~---~g~~~d~~~~~  150 (412)
T 2zbx_A           77 NFPATSPRFEAVRESPQ-AFIGLDPPEHGTRRRMTISEFTVKRIKGMR-PEVEEV-VHGFLDEMLA---AGPTADLVSQF  150 (412)
T ss_dssp             TSCCCSGGGC----CCC-CGGGCCTTHHHHHHTTTGGGGSHHHHHHHH-HHHHHH-HHHHHHHHHH---HCSCEEHHHHT
T ss_pred             ccccccccccccccccc-ccccCCcHHHHHHHHHhhhhcCHHHHHHHH-HHHHHH-HHHHHHHHHh---cCCCccHHHHH
Confidence             11110    01  234 788889999999999999999999998875 455555 4555555543   24679999988


Q ss_pred             HH-HHHHHHHHhhcCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhcccccc
Q 047974          176 KR-TTFDFACLIATGHNPNSLSVGFPEMGFPDAVDDACEAILIRHLEKKLANGWRTIDQFWEKQKSMKQEEIEKGMEAKE  254 (497)
Q Consensus       176 ~~-~~~~v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  254 (497)
                      .. ++.++++. +||.+.+.      ...+.+.+..+....  .  .++..++.+.+.+++.+.|+++++.         
T Consensus       151 ~~~~~~~vi~~-~~G~~~~~------~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~i~~r~~~---------  210 (412)
T 2zbx_A          151 ALPVPSMVICR-LLGVPYAD------HEFFQDASKRLVQST--D--AQSALTARNDLAGYLDGLITQFQTE---------  210 (412)
T ss_dssp             TTHHHHHHHHH-HHTCCGGG------HHHHHHHHHHHHHCS--S--HHHHHHHHHHHHHHHHHHHHHHHHS---------
T ss_pred             HHHHHHHHHHH-HcCCCHHH------HHHHHHHHHHHhccC--c--HHHHHHHHHHHHHHHHHHHHHHHhC---------
Confidence            74 88999996 68986431      112333332222110  0  1455667778888888888877642         


Q ss_pred             ccchhhHHHHHhcCCCCCCCCCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhhcccCCCCCCC
Q 047974          255 DEGIYSLLNCYLSGHEVTGPTPAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRNFSQEGFNKPP  334 (497)
Q Consensus       255 ~~~~~dll~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~  334 (497)
                        ..+|+++.+++..+ ++..++++++.+++..+++||+|||+.+++|++++|++||++|+++++|++            
T Consensus       211 --~~~d~l~~ll~~~~-~~~~ls~~ei~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~~------------  275 (412)
T 2zbx_A          211 --PGAGLVGALVADQL-ANGEIDREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRADRS------------  275 (412)
T ss_dssp             --CCSSHHHHHHHTTT-TTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG------------
T ss_pred             --CCCCHHHHHHHhcc-cCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHhChH------------
Confidence              23689999998754 345699999999999999999999999999999999999999999999743            


Q ss_pred             CCChhhhhcchhHHHHHHHhhcCCCCCC-cccccccCCCcccCCeeeCCCcEEEEeccccccCCCCCCCCCCCCCCCCcc
Q 047974          335 LVRLNELNKLVYLHAALCETLRLYPPVP-FEIRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWGEDCREFKPERWI  413 (497)
Q Consensus       335 ~~~~~~l~~lp~l~a~i~E~lRl~p~~~-~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl  413 (497)
                                 |++|||+|+||++|+++ ...|.+.+|.++ +||.|||||.|+++.+++||||++| +||++|+|||| 
T Consensus       276 -----------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~-~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~-  341 (412)
T 2zbx_A          276 -----------LVPGAVEELLRYLAIADIAGGRVATADIEV-EGQLIRAGEGVIVVNSIANRDGTVY-EDPDALDIHRS-  341 (412)
T ss_dssp             -----------GHHHHHHHHHHHHCCCGGGCEEEESSCEEE-TTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTSC-
T ss_pred             -----------hHHHHHHHHHHhCCccccccceeeCCCeEE-CCEEECCCCEEEeChhhhcCCcccc-CCccccCCCCC-
Confidence                       79999999999999999 567888877666 9999999999999999999999999 99999999996 


Q ss_pred             CCCCCccCCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhc-eEEeecC-ccceeeeeEEEeecCceEEEEE
Q 047974          414 TEDGRIRHEPPHKFFSFNAGPRICIGKDIAFTLMKATAASIIHNY-DVQVVKN-HPVTYNLSIGFRMKHGLLARVS  487 (497)
Q Consensus       414 ~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  487 (497)
                                ...++|||+|+|.|+|++||++|++++++.|+++| ++++.++ .+.....+...+....++|++.
T Consensus       342 ----------~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~g~~~lpv~~~  407 (412)
T 2zbx_A          342 ----------ARHHLAFGFGVHQCLGQNLARLELEVILNALMDRVPTLRLAVPVEQLVLRPGTTIQGVNELPVTWH  407 (412)
T ss_dssp             ----------CTTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGSCBCCTTSCCCBSCCEEECC
T ss_pred             ----------CCCccCCCCCCCcCccHHHHHHHHHHHHHHHHHhcCcccccCCcccceeccccccCCcceeeeecc
Confidence                      23689999999999999999999999999999999 7999753 3333334444555566777654


No 37 
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1
Probab=100.00  E-value=4.8e-60  Score=456.09  Aligned_cols=394  Identities=13%  Similarity=0.114  Sum_probs=300.2

Q ss_pred             hhccCCCCCcccchhhHHHHh-hcc-chHHHHHHHHHHHhCCeeEEeeecc-cCcceEEEcChhhHHHhhhcCCccccCC
Q 047974           24 FRKINPTPWNLPLLGMLASVI-LNI-NQLHDKVAQILEKTKGSFMIKGSWV-AQYDMFLTSDPANVQHIMSTNFSKYHKG  100 (497)
Q Consensus        24 ~~~~ppgp~~~P~~G~~~~~~-~~~-~~~~~~~~~~~~k~g~v~~~~~~~~-~~~~~v~v~~p~~v~~il~~~~~~~~~~  100 (497)
                      ++++|||     ++|++.... ... .+++.++.++++ ||||+++   ++ |+.+.+++++++.++++++++ ..|+++
T Consensus         4 ~~~~pp~-----~~g~l~~~~~~~~~~~p~~~~~~l~~-~gpv~~~---~~~g~~~~vvv~~~~~v~~vl~~~-~~fs~r   73 (428)
T 1cpt_A            4 RATIPEH-----IARTVILPQGYADDEVIYPAFKWLRD-EQPLAMA---HIEGYDPMWIATKHADVMQIGKQP-GLFSNA   73 (428)
T ss_dssp             TCCSCHH-----HHHHHHSSGGGGCHHHHHHHHHHHHH-HCSEEEE---CCTTSCCEEEECSHHHHHHHHHCT-TTEESS
T ss_pred             ccccchh-----hhcccCChhhhcccCCccHHHHHHHH-hCCeeec---cccCCCCeEEEccHHHHHHHHcCc-hhccCc
Confidence            3557777     899865442 111 357888888865 7999998   77 688999999999999999865 567766


Q ss_pred             cc-cccc---c-c-c---cC-----CcCeeecCCchHHHHHHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCC
Q 047974          101 SE-GRKR---F-D-I---FG-----ETGLFNSDFDEWKHQRKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEK  166 (497)
Q Consensus       101 ~~-~~~~---~-~-~---~g-----~~~l~~~~~~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~  166 (497)
                      +. ....   . . +   .|     ..+++..+|+.|+++||+++++|++++++.+. +.+++. .+.+.+.+.+   .+
T Consensus        74 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~g~~~~~~Rr~~~~~fs~~~l~~~~-~~i~~~-~~~l~~~l~~---~~  148 (428)
T 1cpt_A           74 EGSEILYDQNNEAFMRSISGGCPHVIDSLTSMDPPTHTAYRGLTLNWFQPASIRKLE-ENIRRI-AQASVQRLLD---FD  148 (428)
T ss_dssp             SSCSSCCCHHHHHHHHHHTTTSSCSSCCGGGCCTTHHHHHHHHHHTTSSHHHHGGGH-HHHHHH-HHHHHHHHHT---SS
T ss_pred             cccccCCcccccchhccccccccccccccccCChHHHHHHHHHhhhhhCHHHHHHHH-HHHHHH-HHHHHHHHHH---hC
Confidence            54 2110   0 1 2   33     12788889999999999999999999998864 445555 4555555543   23


Q ss_pred             ceeeHHHHH-HHHHHHHHHHhhcCCCCCCCCCCCCCCChHHHHHHHHH--------HHHHHHH----HHHHHhHHHHHHH
Q 047974          167 MLVDFQDLL-KRTTFDFACLIATGHNPNSLSVGFPEMGFPDAVDDACE--------AILIRHL----EKKLANGWRTIDQ  233 (497)
Q Consensus       167 ~~vdl~~~~-~~~~~~v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~----~~~~~~~~~~~~~  233 (497)
                      +.+|+...+ ..+++++++.+ ||.+.+..      ..+.+....+..        .++++.+    .++..++.+.+.+
T Consensus       149 ~~~d~~~~~~~~~~~~vi~~~-fG~~~~~~------~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~  221 (428)
T 1cpt_A          149 GECDFMTDCALYYPLHVVMTA-LGVPEDDE------PLMLKLTQDFFGVHEPDEQAVAAPRQSADEAARRFHETIATFYD  221 (428)
T ss_dssp             SEEEHHHHTTTTHHHHHHHHH-HTCCGGGH------HHHHHHHHTTTCC----------------CHHHHHHHHHHHHHH
T ss_pred             CCeehHHHHHhhhHHHHHHHH-cCCCHhHH------HHHHHHHHHHHhcccccccccccccccchhhHHHHHHHHHHHHH
Confidence            579998554 67999999999 99865421      112221111110        0011111    1345567778888


Q ss_pred             HHHHHHHHHHHHHHhccccccccchhhHHHHHhcCCCCCCCCCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHH
Q 047974          234 FWEKQKSMKQEEIEKGMEAKEDEGIYSLLNCYLSGHEVTGPTPAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFA  313 (497)
Q Consensus       234 ~~~~~i~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~  313 (497)
                      ++.+.|+++++           ...+|+++.+++... ++..++++++.+++..+++||+|||+++++|++++|++||++
T Consensus       222 ~~~~~i~~r~~-----------~~~~dll~~ll~~~~-~~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~  289 (428)
T 1cpt_A          222 YFNGFTVDRRS-----------CPKDDVMSLLANSKL-DGNYIDDKYINAYYVAIATAGHDTTSSSSGGAIIGLSRNPEQ  289 (428)
T ss_dssp             HHHHHHHHHTT-----------SCCSSHHHHHHHCBS-SSSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
T ss_pred             HHHHHHHHHHc-----------CCCCcHHHHHHhccc-cCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHH
Confidence            88888877754           124689999998754 345689999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhcccCCCCCCCCCChhhhhcchhHHHHHHHhhcCCCCCCcccccccCCCcccCCeeeCCCcEEEEecccc
Q 047974          314 ETKIREELKRNFSQEGFNKPPLVRLNELNKLVYLHAALCETLRLYPPVPFEIRIPLQPDVLPSGHQVNQNTHVLISAYSM  393 (497)
Q Consensus       314 ~~~l~~Ei~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~  393 (497)
                      |+++++|++                       |++|||+|+||++|+++...|.+.+|.++ +||.|||||.|+++.+++
T Consensus       290 ~~~l~~E~~-----------------------~l~a~i~E~lRl~p~~~~~~R~~~~d~~l-~G~~Ip~Gt~V~~~~~~~  345 (428)
T 1cpt_A          290 LALAKSDPA-----------------------LIPRLVDEAVRWTAPVKSFMRTALADTEV-RGQNIKRGDRIMLSYPSA  345 (428)
T ss_dssp             HHHHHHCGG-----------------------GHHHHHHHHHHHHCCBCCCEEEESSCEEE-TTEEECTTCEEEECHHHH
T ss_pred             HHHHHHhHH-----------------------HHHHHHHHHHHhCCcccccceeeCCCeeE-CCEEECCCCEEEeCHHHh
Confidence            999999864                       78999999999999999877888887666 999999999999999999


Q ss_pred             ccCCCCCCCCCCCCCCCCccCCCCCccCCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhce-EEeecCccceeee
Q 047974          394 ARMTSVWGEDCREFKPERWITEDGRIRHEPPHKFFSFNAGPRICIGKDIAFTLMKATAASIIHNYD-VQVVKNHPVTYNL  472 (497)
Q Consensus       394 ~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~-~~~~~~~~~~~~~  472 (497)
                      ||||++| +||++|+||||..           .++|||+|+|.|+|++||++|++++++.|+++|+ +++.++.  ....
T Consensus       346 ~rdp~~~-~dP~~F~PeR~~~-----------~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~--~~~~  411 (428)
T 1cpt_A          346 NRDEEVF-SNPDEFDITRFPN-----------RHLGFGWGAHMCLGQHLAKLEMKIFFEELLPKLKSVELSGPP--RLVA  411 (428)
T ss_dssp             TTCTTTC-SSTTSCCTTCCSC-----------CCCTTCCSTTCCTTHHHHHHHHHHHHHHHGGGEEEEEESSCC--EECC
T ss_pred             CCChhhC-CChhhcCCCCCCC-----------CCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCceeCCCc--cccc
Confidence            9999999 9999999999841           3899999999999999999999999999999997 8886432  2223


Q ss_pred             eEEEeecCceEEEEEec
Q 047974          473 SIGFRMKHGLLARVSKR  489 (497)
Q Consensus       473 ~~~~~~~~~~~~~~~~r  489 (497)
                      ....+.+.+++|+++||
T Consensus       412 ~~~~~~~~~lpv~~~p~  428 (428)
T 1cpt_A          412 TNFVGGPKNVPIRFTKA  428 (428)
T ss_dssp             CSSBCSEEECEEEEEEC
T ss_pred             CccccCcceeeEEeeCC
Confidence            33445556799999886


No 38 
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A*
Probab=100.00  E-value=1.5e-59  Score=449.29  Aligned_cols=374  Identities=15%  Similarity=0.134  Sum_probs=295.7

Q ss_pred             hHHHHHHHHHHHhCCeeEEeeecccCcceEEEcChhhHHHhhhcCCccccCCcccc-c------cccccCCcCeeecCCc
Q 047974           49 QLHDKVAQILEKTKGSFMIKGSWVAQYDMFLTSDPANVQHIMSTNFSKYHKGSEGR-K------RFDIFGETGLFNSDFD  121 (497)
Q Consensus        49 ~~~~~~~~~~~k~g~v~~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~~~~~~~~-~------~~~~~g~~~l~~~~~~  121 (497)
                      +++.++.++ ++|||||++   ++++.+.++++||+.+++++.++  .|++++... .      .....|. +++..+|+
T Consensus        21 ~p~~~~~~l-~~yGpv~~~---~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~-~l~~~~g~   93 (411)
T 3a4g_A           21 NPHPAYAAL-RAEDPVRKL---ALPDGPVWLLTRYADVREAFVDP--RLSKDWRHTLPEDQRADMPATPTP-MMILMDPP   93 (411)
T ss_dssp             CCHHHHHHH-HHHCSEEEE---EETTEEEEEECSHHHHHHHHTCT--TEESCGGGGSCGGGCTTCCSCSSC-CGGGCCTT
T ss_pred             CchHHHHHH-HhcCCeeec---cCCCCCEEEEecHHHHHHHHhCC--CcccccccccccccccccCccccc-ccccCCch
Confidence            367788888 899999999   77888999999999999999876  387765432 1      1122455 78889999


Q ss_pred             hHHHHHHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHH-HHHHHHHHHHHhhcCCCCCCCCCCCC
Q 047974          122 EWKHQRKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDL-LKRTTFDFACLIATGHNPNSLSVGFP  200 (497)
Q Consensus       122 ~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~-~~~~~~~v~~~~~fG~~~~~~~~~~~  200 (497)
                      .|+++||+++++|+++.++.+. +.+.+. .+.+.+.+.+    ++.+|+... ...++.++++.+ ||.+.+.      
T Consensus        94 ~h~~~R~~~~~~fs~~~l~~~~-~~i~~~-~~~l~~~l~~----~~~vd~~~~~~~~~~~~vi~~~-~G~~~~~------  160 (411)
T 3a4g_A           94 DHTRLRKLVGRSFTVRRMNELE-PRITEI-ADGLLAGLPT----DGPVDLMREYAFQIPVQVICEL-LGVPAED------  160 (411)
T ss_dssp             HHHHHHHHHHTTCCHHHHHHHH-HHHHHH-HHHHHHHSCS----SSCEEHHHHTTTTHHHHHHHHH-HTCCGGG------
T ss_pred             HHHHHHHHhhhhhCHHHHHHHH-HHHHHH-HHHHHHHHHh----cCCccHHHHHHHHhHHHHHHHH-hCCCHHH------
Confidence            9999999999999999998875 445555 4555555432    257999755 468999999975 8986531      


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccccccccchhhHHHHHhcCCCCCCCCCchHH
Q 047974          201 EMGFPDAVDDACEAILIRHLEKKLANGWRTIDQFWEKQKSMKQEEIEKGMEAKEDEGIYSLLNCYLSGHEVTGPTPAEKV  280 (497)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~l~~~~  280 (497)
                      ...+.+....+...  ..  ..+..++.+.+.+++.+.|+++++.           ..+|+++.+++..++++..+++++
T Consensus       161 ~~~~~~~~~~~~~~--~p--~~~~~~~~~~~~~~~~~~i~~r~~~-----------~~~d~l~~ll~~~~~~~~~ls~~e  225 (411)
T 3a4g_A          161 RDDFSAWSSVLVDD--SP--ADDKNAAMGKLHGYLSDLLERKRTE-----------PDDALLSSLLAVSDEDGDRLSQEE  225 (411)
T ss_dssp             HHHHHHHHHHHTTS--SC--TTTHHHHHHHHHHHHHHHHHHHHHS-----------CCSSHHHHHHHCCCTTCCCCCHHH
T ss_pred             HHHHHHHHHHHhcc--CC--HHHHHHHHHHHHHHHHHHHHHHHhC-----------CCCCHHHHHHHhhccCCCCCCHHH
Confidence            11222222211110  00  1234566778888888888877652           236899999987543455699999


Q ss_pred             HHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhhcccCCCCCCCCCChhhhhcchhHHHHHHHhhcCCCC
Q 047974          281 MRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRNFSQEGFNKPPLVRLNELNKLVYLHAALCETLRLYPP  360 (497)
Q Consensus       281 i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~  360 (497)
                      +..++..+++||+|||+++++|++++|++||++|+++++|++                       |++|||+|+||++|+
T Consensus       226 i~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~-----------------------~l~a~i~E~lRl~p~  282 (411)
T 3a4g_A          226 LVAMAMLLLIAGHETTVNLIGNGVLALLTHPDQRKLLAEDPS-----------------------LISSAVEEFLRFDSP  282 (411)
T ss_dssp             HHHHHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCGG-----------------------GHHHHHHHHHHHTCS
T ss_pred             HHHHHHHHHHhchhhHHHHHHHHHHHHHhCHHHHHHHhcCHH-----------------------HHHHHHHHHHHhccc
Confidence            999999999999999999999999999999999999999853                       799999999999999


Q ss_pred             CC-cccccccCCCcccCCeeeCCCcEEEEeccccccCCCCCCCCCCCCCCCCccCCCCCccCCCCCcccccCCCCCCCcc
Q 047974          361 VP-FEIRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWGEDCREFKPERWITEDGRIRHEPPHKFFSFNAGPRICIG  439 (497)
Q Consensus       361 ~~-~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G  439 (497)
                      ++ ...|.+.+|.++ +||.|||||.|+++.+++||||++| +||++|+||||.           ..++|||+|+|.|+|
T Consensus       283 ~~~~~~R~~~~d~~l-~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~-----------~~~l~FG~G~r~C~G  349 (411)
T 3a4g_A          283 VSQAPIRFTAEDVTY-SGVTIPAGEMVMLGLAAANRDADWM-PEPDRLDITRDA-----------SGGVFFGHGIHFCLG  349 (411)
T ss_dssp             BCBCCCEEESSCEEE-TTEEECTTCEEEEBHHHHTTCTTTS-SSTTSCCTTSCC-----------TTCCTTCCSTTCCTT
T ss_pred             ccCCceeEeCCCEEE-CCEEECCCCEEEeChhhhCCChhhc-CCccccCCCCCC-----------CCCCCCCCCCccCCC
Confidence            99 667888777666 9999999999999999999999999 999999999973           358999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhhc-eEEeecC-ccceeeeeEEEeecCceEEEEEecCCCC
Q 047974          440 KDIAFTLMKATAASIIHNY-DVQVVKN-HPVTYNLSIGFRMKHGLLARVSKRSAQP  493 (497)
Q Consensus       440 ~~~A~~~~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~r~~~~  493 (497)
                      ++||++|++++++.|+++| ++++.++ .+.......+.++..+++|++++|++-+
T Consensus       350 ~~lA~~e~~~~la~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~~~r~~~~  405 (411)
T 3a4g_A          350 AQLARLEGRVAIGRLFADRPELALAVGLDELVYRESTLVRGLSRMPVTMGPRSALE  405 (411)
T ss_dssp             HHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCBCCCTTBCCBSCCEEECCCCCC--
T ss_pred             HHHHHHHHHHHHHHHHHhCCCcEECCCccccccccCccccCcceeEEEecCcchhh
Confidence            9999999999999999999 6999753 2333444455677889999999997643


No 39 
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} SCOP: a.104.1.0 PDB: 3ejd_B* 3eje_B*
Probab=100.00  E-value=1.4e-59  Score=450.18  Aligned_cols=374  Identities=12%  Similarity=0.110  Sum_probs=290.6

Q ss_pred             hHHHHHHHHHHHhCCeeEEeeecccCcceEEEcChhhHHHhhhcCCccccCCcccc------ccccccCCcCeeecCCch
Q 047974           49 QLHDKVAQILEKTKGSFMIKGSWVAQYDMFLTSDPANVQHIMSTNFSKYHKGSEGR------KRFDIFGETGLFNSDFDE  122 (497)
Q Consensus        49 ~~~~~~~~~~~k~g~v~~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~~~~~~~~------~~~~~~g~~~l~~~~~~~  122 (497)
                      +++.++..+ ++||||+++   ++++.+.++++|++.++++++++ ..|.+++...      ......|. +++..+|+.
T Consensus        14 ~p~~~~~~~-r~yGpv~~~---~~~~~~~vvv~~~~~v~~vl~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~g~~   87 (404)
T 3ejb_B           14 NPYSFYDTL-RAVHPIYKG---SFLKYPGWYVTGYEETAAILKDA-RFKVRTPLPESSTKYQDLSHVQNQ-MMLFQNQPD   87 (404)
T ss_dssp             CHHHHHHHH-HHHCSEEEE---EETTEEEEEECCHHHHHHHHHCT-TEECCCSSCTTCCTTHHHHHHHHT-SGGGCCTTH
T ss_pred             CchHHHHHH-HhhCCEeec---cCCCCCEEEEecHHHHHHHHhCc-ccccCcccccccccccchhhhhhc-chhhcCCch
Confidence            367777777 689999999   88899999999999999999986 5666654311      11133455 888999999


Q ss_pred             HHHHHHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHHH-HHHHHHHHHhhcCCCCCCCCCCCCC
Q 047974          123 WKHQRKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLLK-RTTFDFACLIATGHNPNSLSVGFPE  201 (497)
Q Consensus       123 w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~-~~~~~v~~~~~fG~~~~~~~~~~~~  201 (497)
                      |+++||+++++|+++.++.+. +.+++. .+.+.+.+.    +++.+|+...+. .++.++++.+ ||.+.+.      .
T Consensus        88 h~~~Rr~~~~~fs~~~l~~~~-~~i~~~-~~~ll~~l~----~~~~~d~~~~~~~~~~~~vi~~~-~G~~~~~------~  154 (404)
T 3ejb_B           88 HRRLRTLASGAFTPRTTESYQ-PYIIET-VHHLLDQVQ----GKKKMEVISDFAFPLASFVIANI-IGVPEED------R  154 (404)
T ss_dssp             HHHHHHHHHGGGSHHHHHTTH-HHHHHH-HHHHHHTTT----TTSEEEHHHHTHHHHHHHHHHHH-HTCCGGG------H
T ss_pred             HHHHHHHHHhhcCHHHHHHHH-HHHHHH-HHHHHHHhh----hcCCcchHHHHHHHHHHHHHHHH-cCCCHHH------H
Confidence            999999999999999998865 445555 344444443    246789866554 5889999884 7875431      1


Q ss_pred             CChHHHHHHHHHHH---HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccccccccchhhHHHHHhcCCCCCCCCCch
Q 047974          202 MGFPDAVDDACEAI---LIRHLEKKLANGWRTIDQFWEKQKSMKQEEIEKGMEAKEDEGIYSLLNCYLSGHEVTGPTPAE  278 (497)
Q Consensus       202 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~l~~  278 (497)
                      ..+.+....+....   ......+...++.+.+.+++.+.++++++           ...+|+++.++ ... ++..+++
T Consensus       155 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~i~~r~~-----------~~~~d~l~~ll-~~~-~~~~ls~  221 (404)
T 3ejb_B          155 EQLKEWAASLIQTIDFTRSRKALTEGNIMAVQAMAYFKELIQKRKR-----------HPQQDMISMLL-KGR-EKDKLTE  221 (404)
T ss_dssp             HHHHHHHHHHHGGGSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------SCCSSHHHHHH-HC-----CCCH
T ss_pred             HHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh-----------CCcchHHHHHH-hcc-cCCCCCH
Confidence            12222222221110   01111345567778888888888887763           34578999999 332 3456999


Q ss_pred             HHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhhcccCCCCCCCCCChhhhhcchhHHHHHHHhhcCC
Q 047974          279 KVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRNFSQEGFNKPPLVRLNELNKLVYLHAALCETLRLY  358 (497)
Q Consensus       279 ~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~  358 (497)
                      +++..++..+++||+|||+++++|++++|++||++|+++++|++                       |+++||+|+||++
T Consensus       222 ~el~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~-----------------------~l~a~i~E~lRl~  278 (404)
T 3ejb_B          222 EEAASTCILLAIAGHETTVNLISNSVLCLLQHPEQLLKLRENPD-----------------------LIGTAVEECLRYE  278 (404)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG-----------------------GHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHcchHHHHHHHHHHHHHHHHCHHHHHHHHhCHH-----------------------HHHHHHHHHHHhC
Confidence            99999999999999999999999999999999999999999865                       7899999999999


Q ss_pred             CCCCcccccccCCCcccCCeeeCCCcEEEEeccccccCCCCCCCCCCCCCCCCccCCCCCccCCCCCcccccCCCCCCCc
Q 047974          359 PPVPFEIRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWGEDCREFKPERWITEDGRIRHEPPHKFFSFNAGPRICI  438 (497)
Q Consensus       359 p~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~  438 (497)
                      |+++...|.+.+|.++ +||.|||||.|+++.+++||||++| +||++|+||||-           ..++|||+|+|.|+
T Consensus       279 p~~~~~~R~~~~d~~~-~g~~ip~Gt~v~~~~~~~~rdp~~~-~dp~~F~p~R~~-----------~~~~~Fg~G~r~C~  345 (404)
T 3ejb_B          279 SPTQMTARVASEDIDI-CGVTIRQGEQVYLLLGAANRDPSIF-TNPDVFDITRSP-----------NPHLSFGHGHHVCL  345 (404)
T ss_dssp             CSBCEEEEEESSCEEE-TTEEECTTCEEEEEHHHHTTCTTTS-SSTTSCCTTCSS-----------CCCCTTCCSTTCCT
T ss_pred             CcccccceEeCCCeEE-CCEEECCCCEEEecHHHhCCChhhC-CCcceeCCCCCC-----------CCCCCCCCcCccCc
Confidence            9999778888887666 9999999999999999999999999 999999999982           35899999999999


Q ss_pred             chHHHHHHHHHHHHHHHhhc-eEEeecCccceeeeeEEEeecCceEEEEEecCC
Q 047974          439 GKDIAFTLMKATAASIIHNY-DVQVVKNHPVTYNLSIGFRMKHGLLARVSKRSA  491 (497)
Q Consensus       439 G~~~A~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  491 (497)
                      |++||++|++++++.|+++| ++++.++ +.....+...+....++|+++||.+
T Consensus       346 G~~lA~~e~~~~l~~ll~~f~~~~l~~~-~~~~~~~~~~~~~~~lpv~~~~~~~  398 (404)
T 3ejb_B          346 GSSLARLEAQIAINTLLQRMPSLNLADF-EWRYRPLFGFRALEELPVTFEASWS  398 (404)
T ss_dssp             THHHHHHHHHHHHHHHHHHCTTCEEC---CCCBCSCSSBCCBSCCEEECC----
T ss_pred             CHHHHHHHHHHHHHHHHHhCcccccCCC-CceeccCcccCCcceeEEEEecccc
Confidence            99999999999999999999 9999853 3345556667788899999999865


No 40 
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A*
Probab=100.00  E-value=7.4e-60  Score=451.27  Aligned_cols=384  Identities=12%  Similarity=0.112  Sum_probs=296.9

Q ss_pred             ccCCCCCcccchhhHHHHhhccchHHHHHHHHHHHhCCeeEEeeecc-cCcc-eEEEcChhhHHHhhhcCCccccCCccc
Q 047974           26 KINPTPWNLPLLGMLASVILNINQLHDKVAQILEKTKGSFMIKGSWV-AQYD-MFLTSDPANVQHIMSTNFSKYHKGSEG  103 (497)
Q Consensus        26 ~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~k~g~v~~~~~~~~-~~~~-~v~v~~p~~v~~il~~~~~~~~~~~~~  103 (497)
                      +.+|+|+++|+.++   +.   .+++.++.+++ +||||+++   ++ ++.+ .++|+||+.+++|+.+  ..|.+++.+
T Consensus         8 ~~~~~~~~~p~~~~---~~---~~p~~~~~~l~-~~Gpv~~~---~~~~g~~p~~vv~~~~~v~~vl~~--~~f~~~~~~   75 (406)
T 1s1f_A            8 QAVPPVRDWPAVDL---PG---SDFDPVLTELM-REGPVTRI---SLPNGEGWAWLVTRHDDVRLVTND--PRFGREAVM   75 (406)
T ss_dssp             CCSCCEEECCCCCC---CT---TCCCHHHHHHH-HHCSEEEE---ECSBSBSCEEEECSHHHHHHHHTC--TTEESTTTT
T ss_pred             hhccCCCCCCCCcc---cc---cCchHHHHHHH-hcCCeeee---ccCCCcccEEEEcCHHHHHHHHcC--CCccCCcCC
Confidence            47888888999877   22   24667777774 79999998   64 5666 9999999999999986  367776543


Q ss_pred             ccc---c-c-c--cCCcCeeecCCchHHHHHHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHH-
Q 047974          104 RKR---F-D-I--FGETGLFNSDFDEWKHQRKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLL-  175 (497)
Q Consensus       104 ~~~---~-~-~--~g~~~l~~~~~~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~-  175 (497)
                      ...   . . .  .+. ++++.+|+.|+++||+++++|+++.++.+. +.+.+. .+.+.+.+.+   .++++|+...+ 
T Consensus        76 ~~~~~~~~~~~~~~~~-~l~~~dg~~h~~~R~~~~~~fs~~~l~~~~-~~i~~~-~~~l~~~l~~---~~~~~d~~~~~~  149 (406)
T 1s1f_A           76 DRQVTRLAPHFIPARG-AVGFLDPPDHTRLRRSVAAAFTARGVERVR-ERSRGM-LDELVDAMLR---AGPPADLTEAVL  149 (406)
T ss_dssp             TTTBCBSSSSCSSCTT-SGGGCCTTHHHHHHHHHHHHHSHHHHHHHH-HHHHHH-HHHHHHHHHH---HCSSEEHHHHTT
T ss_pred             CCCccccccccccccc-ccccCCchHHHHHHHHHHHhhCHHHHHHHH-HHHHHH-HHHHHHHHHh---cCCCccHHHHHh
Confidence            211   1 2 2  255 888899999999999999999999998875 445555 4555555543   24579998776 


Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccccccc
Q 047974          176 KRTTFDFACLIATGHNPNSLSVGFPEMGFPDAVDDACEAILIRHLEKKLANGWRTIDQFWEKQKSMKQEEIEKGMEAKED  255 (497)
Q Consensus       176 ~~~~~~v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  255 (497)
                      ..+++++++. +||.+.+.      ...+.+....+......   .++..++.+.+.+++.+.|+++++           
T Consensus       150 ~~~~~~vi~~-~~G~~~~~------~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~r~~-----------  208 (406)
T 1s1f_A          150 SPFPIAVICE-LMGVPATD------RHSMHTWTQLILSSSHG---AEVSERAKNEMNAYFSDLIGLRSD-----------  208 (406)
T ss_dssp             THHHHHHHHH-HHTCCGGG------HHHHHHHHHHHHHHHTT---CCCCHHHHTHHHHHHHHHHHTSCC-----------
T ss_pred             hHhHHHHHHH-HhCCCHHH------HHHHHHHHHHHHhccCC---HHHHHHHHHHHHHHHHHHHHHHHh-----------
Confidence            4799999998 58986531      11222222222211000   113345666778888887776643           


Q ss_pred             cchhhHHHHHhcCCCCCCCCCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhhcccCCCCCCCC
Q 047974          256 EGIYSLLNCYLSGHEVTGPTPAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRNFSQEGFNKPPL  335 (497)
Q Consensus       256 ~~~~dll~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~  335 (497)
                      ...+|+++.+++..++  ..++++++.+++..+++|| |||+.+++|++++|++||++|+++++|++             
T Consensus       209 ~~~~d~l~~ll~~~~~--~~ls~~el~~~~~~l~~AG-eTt~~~l~~~l~~L~~~P~~~~~l~~E~~-------------  272 (406)
T 1s1f_A          209 SAGEDVTSLLGAAVGR--DEITLSEAVGLAVLLQIGG-EAVTNNSGQMFHLLLSRPELAERLRSEPE-------------  272 (406)
T ss_dssp             SCCCSHHHHHHHHHHT--TSSCHHHHHHHHHHHHHHT-THHHHHHHHHHHHHHHSHHHHHHHHHCGG-------------
T ss_pred             CCCCCHHHHHHHhhcc--cCCCHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHHCHHHHHHHHhCHH-------------
Confidence            1246899999876432  4589999999999999999 99999999999999999999999999854             


Q ss_pred             CChhhhhcchhHHHHHHHhhcCCCCCC--cccccccCCCcccCCeeeCCCcEEEEeccccccCCCCCCCCCCCCCCCCcc
Q 047974          336 VRLNELNKLVYLHAALCETLRLYPPVP--FEIRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWGEDCREFKPERWI  413 (497)
Q Consensus       336 ~~~~~l~~lp~l~a~i~E~lRl~p~~~--~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl  413 (497)
                                |++|||+|+||++|+++  ...|.+.+|.++ +||.|||||.|+++.+++||||++| +||++|+||||.
T Consensus       273 ----------~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~i-~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~  340 (406)
T 1s1f_A          273 ----------IRPRAIDELLRWIPHRNAVGLSRIALEDVEI-KGVRIRAGDAVYVSYLAANRDPEVF-PDPDRIDFERSP  340 (406)
T ss_dssp             ----------GHHHHHHHHHHHSCCBSSCCCCEEESSCEEE-TTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTC--
T ss_pred             ----------HHHHHHHHHHhhCCCccccCcceEeCCCEEE-CCEEECCCCEEEeCcHHhcCCcccC-CCcceeCCCCCC
Confidence                      78999999999999999  777888877666 9999999999999999999999999 999999999985


Q ss_pred             CCCCCccCCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhc-eEEeecC-ccceeeeeEEEeecCceEEEEE
Q 047974          414 TEDGRIRHEPPHKFFSFNAGPRICIGKDIAFTLMKATAASIIHNY-DVQVVKN-HPVTYNLSIGFRMKHGLLARVS  487 (497)
Q Consensus       414 ~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  487 (497)
                                 ..++|||+|+|.|+|++||++|++++++.|+++| ++++.++ .+.....+...+...+++|++.
T Consensus       341 -----------~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~~  405 (406)
T 1s1f_A          341 -----------NPHVSFGFGPHYCPGGMLARLESELLVDAVLDRVPGLKLAVAPEDVPFKKGALIRGPEALPVTWH  405 (406)
T ss_dssp             -----------CCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHSTTCEESSCGGGSCBCSSCSBCCBSCCEEECC
T ss_pred             -----------CCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCcEeCCCCccceeccCcccCCcceeEEeeC
Confidence                       2589999999999999999999999999999999 7999875 2333444555677788888863


No 41 
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A*
Probab=100.00  E-value=1.1e-59  Score=464.20  Aligned_cols=411  Identities=14%  Similarity=0.163  Sum_probs=289.2

Q ss_pred             hccCCCCCcccchhhHHHHhhc--cchHHHHHHHHHHHhCC-eeEEeeecccCcce-------EEEcChhhHHHhhhcCC
Q 047974           25 RKINPTPWNLPLLGMLASVILN--INQLHDKVAQILEKTKG-SFMIKGSWVAQYDM-------FLTSDPANVQHIMSTNF   94 (497)
Q Consensus        25 ~~~ppgp~~~P~~G~~~~~~~~--~~~~~~~~~~~~~k~g~-v~~~~~~~~~~~~~-------v~v~~p~~v~~il~~~~   94 (497)
                      .+.||||++||++|++.++...  ..+++.++.++++|||+ ||++   ++++.++       +++.+++..+.++... 
T Consensus        27 ~~~pPGp~g~P~iG~~~~~~~~~~~~~~~~f~~~~~~kyG~~Vf~~---~l~~~~~vv~~p~~v~~~~~~~~~~l~~~~-  102 (495)
T 3dsk_A           27 IRNIPGNYGLPIVGPIKDRWDYFYDQGAEEFFKSRIRKYNSTVYRV---NMPPGAFIAENPQVVALLDGKSFPVLFDVD-  102 (495)
T ss_dssp             BCCCCCCCCSTTHHHHHHHHHHHTTSCHHHHHHHHHHHHTCSEEEE---ECSCCTTTCSCCEEEEECSTTTGGGGGCTT-
T ss_pred             CCCCCCCCCCCccchHHHHHHHHHhcCcHHHHHHHHHHhCCceEee---cCCCCCCccCCCCEEEEeCCcceeeecccc-
Confidence            3479999999999999888621  23578999999999999 9999   8888888       6667777666666432 


Q ss_pred             ccccCC-----ccccccccccC---CcCeeecCCchHHHHHHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCC
Q 047974           95 SKYHKG-----SEGRKRFDIFG---ETGLFNSDFDEWKHQRKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEK  166 (497)
Q Consensus        95 ~~~~~~-----~~~~~~~~~~g---~~~l~~~~~~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~  166 (497)
                       ...|.     .+.... .++|   ..+++..+|+.|+++|+++.+.|+... ..+. +.+++. .+.+.+.+.+...++
T Consensus       103 -~v~k~~~~~~~~~~~~-~l~g~~~~~~~~~~~g~~h~~~R~~~~~~f~~~~-~~~~-~~i~~~-~~~ll~~~~~~~~~~  177 (495)
T 3dsk_A          103 -KVEKKDLLTGTYMPST-ELTGGYRILSYLDPSEPKHEKLKNLLFFLLKSSR-NRIF-PEFQAT-YSELFDSLEKELSLK  177 (495)
T ss_dssp             -TEECSSCTTSSSCCCG-GGGTTCCCGGGCCTTSHHHHHHHHHHHHHHHHTT-TTHH-HHHHHH-HHHHHHHHHHHHHHH
T ss_pred             -cccccccccccCCCCc-cccCCCcceeeeCCCchHHHHHHHHHHHHHHHHH-HHHH-HHHHHH-HHHHHHHHHHHhccC
Confidence             11111     111111 4455   224556789999999999999998754 5543 445555 344445554322334


Q ss_pred             ceeeHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH--
Q 047974          167 MLVDFQDLLKRTTFDFACLIATGHNPNSLSVGFPEMGFPDAVDDACEAILIRHLEKKLANGWRTIDQFWEKQKSMKQE--  244 (497)
Q Consensus       167 ~~vdl~~~~~~~~~~v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--  244 (497)
                      +.+|+.+++..+++++++.++||.++...+   ....+.+.+..+...........       .+-+++.+.+.++++  
T Consensus       178 ~~vdl~~~~~~~~~~~i~~~~~G~~~~~~~---~~~~~~~~~~~~~~~~~~p~~~~-------~~p~~~~~~~~~~~~~~  247 (495)
T 3dsk_A          178 GKADFGGSSDGTAFNFLARAFYGTNPADTK---LKADAPGLITKWVLFNLHPLLSI-------GLPRVIEEPLIHTFSLP  247 (495)
T ss_dssp             SSEESHHHHHHHHHHHHHHHHHSCCGGGST---TTTCHHHHHHHHHHHHHGGGCCC-------SSCHHHHHHHHSSSCCC
T ss_pred             CCccHHHHHHHHHHHHHHHHHcCCCcchhh---hhhhHHHHHHHHHHHhhhhHhHh-------ccHHHHHHHHHHhhccc
Confidence            689999999999999999999998776441   22334444433332211111000       000122222221110  


Q ss_pred             ------HHHhccccccccchhhHHHHHhcCCCCCCCCCchHHHHHHHHHHH-HhcCcchHHHHHHHHHHHhc-ChHHHHH
Q 047974          245 ------EIEKGMEAKEDEGIYSLLNCYLSGHEVTGPTPAEKVMRDNITALI-FATEGTTSIALTWFFWLVSK-NPFAETK  316 (497)
Q Consensus       245 ------~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~l~~~~i~~~~~~~~-~ag~~tt~~~l~~~l~~l~~-~p~~~~~  316 (497)
                            .....     .+...+.++.+++..++  ..++++++..+++.++ +||++||+.+++|++++|+. ||++|++
T Consensus       248 ~~~~~~~~~~~-----~~~~~~~~~~ll~~~~~--~~l~~~ei~~~~~~~l~~ag~~tt~~~l~~~l~~L~~~~P~~~~~  320 (495)
T 3dsk_A          248 PALVKSDYQRL-----YEFFLESAGEILVEADK--LGISREEATHNLLFATCFNTWGGMKILFPNMVKRIGRAGHQVHNR  320 (495)
T ss_dssp             GGGGHHHHHHH-----HHHHHHHCHHHHHHHHH--TTCCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred             chhhhhhHHHH-----HHHHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCHHHHHH
Confidence                  00000     00011222233332211  3488999998766665 99999999999999999996 9999999


Q ss_pred             HHHHHHhhcccCCCCCCCCCChhhhhcchhHHHHHHHhhcCCCCCCcccccccCCCccc---CCeeeCCCcEEEEecccc
Q 047974          317 IREELKRNFSQEGFNKPPLVRLNELNKLVYLHAALCETLRLYPPVPFEIRIPLQPDVLP---SGHQVNQNTHVLISAYSM  393 (497)
Q Consensus       317 l~~Ei~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~---~g~~ip~g~~v~~~~~~~  393 (497)
                      |++|++++++.    .+..++.+++.+||||+|||+|+||++|+++...|++.+|.++.   +||.||||+.|+++.+++
T Consensus       321 lr~Ei~~~~~~----~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~r~a~~d~~l~~~~~g~~IpkG~~v~~~~~~~  396 (495)
T 3dsk_A          321 LAEEIRSVIKS----NGGELTMGAIEKMELTKSVVYECLRFEPPVTAQYGRAKKDLVIESHDAAFKVKAGEMLYGYQPLA  396 (495)
T ss_dssp             HHHHHHHHHHH----TTTCCCHHHHHTCHHHHHHHHHHHHHSCSSCEEEEEESSCEEEECSSCEEEECTTCEEEEEHHHH
T ss_pred             HHHHHHHHhcc----CCCCCCHHHHhcCHHHHHHHHHHHhcCCCccccceeecCCeEeccCCCceEECCCCEEEeccHHh
Confidence            99999999863    34678999999999999999999999999999989988887774   599999999999999999


Q ss_pred             ccCCCCCCCCCCCCCCCCccCCCCCcc-----CCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCc
Q 047974          394 ARMTSVWGEDCREFKPERWITEDGRIR-----HEPPHKFFSFNAGPRICIGKDIAFTLMKATAASIIHNYDVQVVKNH  466 (497)
Q Consensus       394 ~~d~~~~g~~p~~F~P~Rfl~~~~~~~-----~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~  466 (497)
                      |+||++| +||++|+|+||+++++...     -+....++|||+|+|.|+|++||++|++++++.|+++|++...++.
T Consensus       397 ~~dp~~~-~dp~~F~P~Rfl~~~~~~~~~~~~fg~G~~~~~fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~  473 (495)
T 3dsk_A          397 TRDPKIF-DRADEFVPERFVGEEGEKLLRHVLWSNGPETETPTVGNKQCAGKDFVVLVARLFVIEIFRRYDSFDIEVG  473 (495)
T ss_dssp             HTCTTTS-TTTTSCCTTTTCHHHHHHGGGGCCTTSSCTTSCCCTTSCSCTTHHHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred             hCCcccC-CCccccCCcccCCCCccchhhcccccCCcCcCCCCCCCCcCchHHHHHHHHHHHHHHHHHHCceEeCCCC
Confidence            9999999 9999999999997532110     0112235566666699999999999999999999999998877643


No 42 
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A*
Probab=100.00  E-value=1.5e-59  Score=449.69  Aligned_cols=374  Identities=13%  Similarity=0.102  Sum_probs=291.5

Q ss_pred             hHHHHHHHHHHHhCCee-----EEeeecccCcceEEEcChhhHHHhhhcCCccccCCcccc-cc----c-c-ccCCcCee
Q 047974           49 QLHDKVAQILEKTKGSF-----MIKGSWVAQYDMFLTSDPANVQHIMSTNFSKYHKGSEGR-KR----F-D-IFGETGLF  116 (497)
Q Consensus        49 ~~~~~~~~~~~k~g~v~-----~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~~~~~~~~-~~----~-~-~~g~~~l~  116 (497)
                      +++.++.++ ++||||+     ++   ++  .+.++++||+.+++++.++ ..|++++... ..    . . ..|. +++
T Consensus        26 ~p~~~~~~l-~~~Gpv~~~~~~~~---~~--~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~-~l~   97 (414)
T 2uuq_A           26 NPWPMYRAL-RDHDPVHHVVPPQR---PE--YDYYVLSRHADVWSAARDH-QTFSSAQGLTVNYGELEMIGLHDTP-PMV   97 (414)
T ss_dssp             CCHHHHHHH-HHHCSEEEECCTTC---GG--GCEEEECSHHHHHHHHHCT-TTEESTTCSSSCTTHHHHHTCSSSC-CGG
T ss_pred             CchHHHHHH-HhcCCEEccccccc---CC--CCEEEEcCHHHHHHHHcCc-hhccCCCCcccccCccccccccccc-ccc
Confidence            467778777 5799998     77   54  5899999999999999986 6687775432 11    1 1 2355 888


Q ss_pred             ecCCchHHHHHHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHH-HHHHHHHHHHHHHhhcCCCCCCC
Q 047974          117 NSDFDEWKHQRKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQ-DLLKRTTFDFACLIATGHNPNSL  195 (497)
Q Consensus       117 ~~~~~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~-~~~~~~~~~v~~~~~fG~~~~~~  195 (497)
                      ..+|+.|+++|++++++|+++.++.+. +.+++. .+.+.+.+.+   . +.+|+. +++..+++++++. +||.+.+. 
T Consensus        98 ~~~g~~h~~~R~~~~~~fs~~~l~~~~-~~i~~~-~~~ll~~l~~---~-~~vdl~~~~~~~~~~~vi~~-~~G~~~~~-  169 (414)
T 2uuq_A           98 MQDPPVHTEFRKLVSRGFTPRQVETVE-PTVRKF-VVERLEKLRA---N-GGGDIVTELFKPLPSMVVAH-YLGVPEED-  169 (414)
T ss_dssp             GCCTTHHHHHHHHHHTTSSHHHHHHHH-HHHHHH-HHHHHHHHHH---T-TEEEHHHHTTTHHHHHHHHH-HTTCCGGG-
T ss_pred             cCCchhHHHHHHHhhhhcCHHHHHHHH-HHHHHH-HHHHHHHHHh---c-CCccHHHHHHHHhHHHHHHH-HhCCCHHH-
Confidence            899999999999999999999998875 445555 4555555543   1 369997 5567999999998 68986541 


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccccccccchhhHHHHHhcCCCC-CCC
Q 047974          196 SVGFPEMGFPDAVDDACEAILIRHLEKKLANGWRTIDQFWEKQKSMKQEEIEKGMEAKEDEGIYSLLNCYLSGHEV-TGP  274 (497)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~-~~~  274 (497)
                           ...+.+....+..............++.+.+.+++.+.|+++++           ...+|+++.+++...+ ++.
T Consensus       170 -----~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~r~~-----------~~~~dll~~ll~~~~~~~~~  233 (414)
T 2uuq_A          170 -----WTQFDGWTQAIVAANAVDGATTGALDAVGSMMAYFTGLIERRRT-----------EPADDAISHLVAAGVGADGD  233 (414)
T ss_dssp             -----HHHHHHHHHHHHHHHHC-----CCHHHHHHHHHHHHHHHHHHTT-----------SCCSSHHHHHHHTTTTCTTC
T ss_pred             -----HHHHHHHHHHHHhhcccCCchhHHHHHHHHHHHHHHHHHHHHHh-----------CCCCCHHHHHHhcccccCCC
Confidence                 11233333333221111000123445667788888888877654           1246899999987532 344


Q ss_pred             CCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhhcccCCCCCCCCCChhhhhcchhHHHHHHHh
Q 047974          275 TPAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRNFSQEGFNKPPLVRLNELNKLVYLHAALCET  354 (497)
Q Consensus       275 ~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~  354 (497)
                      .++++++..++..+++||+|||+++++|++++|++||++|+++++|++                       |++|||+|+
T Consensus       234 ~ls~~ei~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E~~-----------------------~l~a~i~E~  290 (414)
T 2uuq_A          234 TAGTLSILAFTFTMVTGGNDTVTGMLGGSMPLLHRRPDQRRLLLDDPE-----------------------GIPDAVEEL  290 (414)
T ss_dssp             HHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCGG-----------------------GHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHhCHH-----------------------HHHHHHHHH
Confidence            589999999999999999999999999999999999999999999853                       899999999


Q ss_pred             hcCCCCCCcccccccCCCcccCCeeeCCCcEEEEeccccccCCCCCCCCCCCCCCCCccCCCCCccCCCCCcccccCCCC
Q 047974          355 LRLYPPVPFEIRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWGEDCREFKPERWITEDGRIRHEPPHKFFSFNAGP  434 (497)
Q Consensus       355 lRl~p~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~  434 (497)
                      ||++|+++...|.+.+|.++ +||.|||||.|+++.+++||||++||+||++|+||||.           ..++|||+|+
T Consensus       291 lRl~p~~~~~~R~~~~d~~l-~G~~Ip~Gt~V~~~~~~~~rdp~~~G~dP~~F~PeR~~-----------~~~~~FG~G~  358 (414)
T 2uuq_A          291 LRLTSPVQGLARTTTRDVTI-GDTTIPAGRRVLLLYGSANRDERQYGPDAAELDVTRCP-----------RNILTFSHGA  358 (414)
T ss_dssp             HHHHCSBCCEEEEESSCEEE-TTEEECTTCEEEECHHHHTTCHHHHCTTTTSCCTTCCC-----------CSCCTTCSST
T ss_pred             HHhCCCcCCcceEECCCEEE-CCEEECCCCEEEeChhhhCCCHHHhCCCchhcCCCCCC-----------CCCcCCCCCC
Confidence            99999999777888877666 99999999999999999999999999999999999984           2589999999


Q ss_pred             CCCcchHHHHHHHHHHHHHHHhhc-eEEeecCccceeeeeEEEeecCceEEEEEecC
Q 047974          435 RICIGKDIAFTLMKATAASIIHNY-DVQVVKNHPVTYNLSIGFRMKHGLLARVSKRS  490 (497)
Q Consensus       435 r~C~G~~~A~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  490 (497)
                      |.|+|++||++|++++++.|+++| ++++.+ .+.......+.+++.+++|+++||.
T Consensus       359 r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~-~~~~~~~~~~~~~~~~lpv~~~~r~  414 (414)
T 2uuq_A          359 HHCLGAAAARMQCRVALTELLARCPDFEVAE-SRIVWSGGSYVRRPLSVPFRVTSSR  414 (414)
T ss_dssp             TCCTTHHHHHHHHHHHHHHHHHHCCSEEECG-GGCEECCCSSBCCEEECEEEEC---
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHhCcccEECC-CCccccccccccCcceeEEEecCCC
Confidence            999999999999999999999999 699974 3344445556677889999999874


No 43 
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A*
Probab=100.00  E-value=3.9e-59  Score=445.68  Aligned_cols=371  Identities=12%  Similarity=0.087  Sum_probs=294.8

Q ss_pred             hHHHHHHHHHHHh--CCeeEEeeecccCcceEEEcChhhHHHhhhcCCccccCCccccccc-cccCCcCeeecCCchHHH
Q 047974           49 QLHDKVAQILEKT--KGSFMIKGSWVAQYDMFLTSDPANVQHIMSTNFSKYHKGSEGRKRF-DIFGETGLFNSDFDEWKH  125 (497)
Q Consensus        49 ~~~~~~~~~~~k~--g~v~~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~~~~~~~~~~~-~~~g~~~l~~~~~~~w~~  125 (497)
                      +++.++.+++++|  ||||++   ++++ +.++|+||+.+++++++. ..|.+++...... ...+..+++..+|+.|++
T Consensus        20 ~p~~~~~~l~~~Y~~Gpv~~~---~~~~-~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   94 (398)
T 4fb2_A           20 TPHAFFEALRDEAETTPIGWS---EAYG-GHWVVAGYKEIQAVIQNT-KAFSNKGVTFPRYETGEFELMMAGQDDPVHKK   94 (398)
T ss_dssp             SSHHHHHHHHHHHTTCSEEEE---CGGG-CEEEECSHHHHHHHHTCC-SSEEGGGCSSSCC----CCCTTTTCCTTHHHH
T ss_pred             ChhHHHHHHHhcCCCCCeEEe---cCCC-CEEEEccHHHHHHHHhCh-hhccCCcccccCCCCcccccCcccCCchHHHH
Confidence            4788999999999  999999   7775 699999999999999654 6777766544322 222332567889999999


Q ss_pred             HHHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHH-HHHHHHHHHHhhcCCCCCCCCCCCCCCCh
Q 047974          126 QRKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLL-KRTTFDFACLIATGHNPNSLSVGFPEMGF  204 (497)
Q Consensus       126 ~R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~v~~~~~fG~~~~~~~~~~~~~~~  204 (497)
                      +|+++.+.|+++.++.+. +.+.+. .+.+.+.+.+    ++.+|+...+ ..++.++++. +||.+...      ...+
T Consensus        95 ~R~~~~~~f~~~~l~~~~-~~i~~~-~~~l~~~l~~----~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~------~~~~  161 (398)
T 4fb2_A           95 YRQLVAKPFSPEATDLFT-EQLRQS-TNDLIDARIE----LGEGDAATWLANEIPARLTAI-LLGLPPED------GDTY  161 (398)
T ss_dssp             HHHHHHTTTCHHHHHTTH-HHHHHH-HHHHHHTTTT----TTEEEHCCCCCTTHHHHHHHH-HTTSCGGG------HHHH
T ss_pred             HHHHHHHhhCHHHHHHHH-HHHHHH-HHHHHHHHhh----cCCccHHHHHHHHHHHHHHHH-HcCCCHHH------HHHH
Confidence            999999999999998865 445555 3444444432    2468876555 6899999998 68875421      1122


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccccccccchhhHHHHHhcCCCCCCCCCchHHHHHH
Q 047974          205 PDAVDDACEAILIRHLEKKLANGWRTIDQFWEKQKSMKQEEIEKGMEAKEDEGIYSLLNCYLSGHEVTGPTPAEKVMRDN  284 (497)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~l~~~~i~~~  284 (497)
                      .+.+..+..    ........++.+.+.+++.+.++++++           ...+|+++.+++... ++..++++++..+
T Consensus       162 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~r~~-----------~~~~d~l~~ll~~~~-~~~~l~~~~i~~~  225 (398)
T 4fb2_A          162 RRWVWAITH----VENPEEGAEIFAELVAHARTLIAERRT-----------NPGNDIMSRVIMSKI-DGESLSEDDLIGF  225 (398)
T ss_dssp             HHHHHHHHH----CCCHHHHHHHHHHHHHHHHHHHHHHHH-----------SCCSSHHHHHHHCCB-TTBCCCHHHHHHH
T ss_pred             HHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHHHHh-----------CCCCCHHHHHHHccc-CCCCCCHHHHHHH
Confidence            222222221    111335667788889999999988875           234789999998765 3456999999999


Q ss_pred             HHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhhcccCCCCCCCCCChhhhhcchhHHHHHHHhhcCCCCCCcc
Q 047974          285 ITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRNFSQEGFNKPPLVRLNELNKLVYLHAALCETLRLYPPVPFE  364 (497)
Q Consensus       285 ~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~  364 (497)
                      +..+++||+|||+++++|++++|++||++|+++++|++                       |++|||+|+||++|+++ .
T Consensus       226 ~~~l~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~-----------------------~l~a~i~E~lRl~p~~~-~  281 (398)
T 4fb2_A          226 FTILLLGGIDNTARFLSSVFWRLAWDIELRRRLIAHPE-----------------------LIPNAVDELLRFYGPAM-V  281 (398)
T ss_dssp             HHHCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHCGG-----------------------GHHHHHHHHHHHHCCBC-E
T ss_pred             HHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHH-----------------------HHHHHHHHHHHhCCCcC-C
Confidence            99999999999999999999999999999999999965                       67899999999999999 8


Q ss_pred             cccccCCCcccCCeeeCCCcEEEEeccccccCCCCCCCCCCCCCCCCccCCCCCccCCCCCcccccCCCCCCCcchHHHH
Q 047974          365 IRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWGEDCREFKPERWITEDGRIRHEPPHKFFSFNAGPRICIGKDIAF  444 (497)
Q Consensus       365 ~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~  444 (497)
                      .|.+.+|.++ +||.|||||.|+++.+++||||++| +||++|+||||           ...|+|||+|+|.|+|++||+
T Consensus       282 ~R~~~~d~~l-~g~~Ip~Gt~V~~~~~~~~rdp~~~-~dp~~F~PeR~-----------~~~~~~FG~G~r~C~G~~lA~  348 (398)
T 4fb2_A          282 GRLVTQEVTV-GDITMKPGQTAMLWFPIASRDRSAF-DSPDNIVIERT-----------PNRHLSLGHGIHRCLGAHLIR  348 (398)
T ss_dssp             EEEECSCEEE-TTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTCC-----------SCCCCTTCCSTTCCTTHHHHH
T ss_pred             CeeeCCCEEE-CCEEECCCCEEEechHhhcCChhhC-CCcCeeCCCCC-----------CCCCCCCCCCCcCCCCHHHHH
Confidence            8888887666 9999999999999999999999999 99999999997           246899999999999999999


Q ss_pred             HHHHHHHHHHHhhc-eEEeecCccceeeeeEEEeecCceEEEEEecCC
Q 047974          445 TLMKATAASIIHNY-DVQVVKNHPVTYNLSIGFRMKHGLLARVSKRSA  491 (497)
Q Consensus       445 ~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  491 (497)
                      +|++++++.|+++| ++++.++.+...... ..+.+..++|+++||..
T Consensus       349 ~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~-~~~~~~~lpv~~~~~~~  395 (398)
T 4fb2_A          349 VEARVAITEFLKRIPEFSLDPNKECEWLMG-QVAGMLHVPIIFPKGKR  395 (398)
T ss_dssp             HHHHHHHHHHHHHCCSCEECTTSCCEEECS-SBCEEEECEEECCCCCC
T ss_pred             HHHHHHHHHHHHhCCCcEECCCCCceeccc-cccccceeEEEEcCCCC
Confidence            99999999999999 999987665444333 33444579999999864


No 44 
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A*
Probab=100.00  E-value=1.2e-58  Score=442.95  Aligned_cols=368  Identities=15%  Similarity=0.161  Sum_probs=293.9

Q ss_pred             hHHHHHHHHHHHhCCeeEEeeecccCcceEEEcChhhHHHhhhcCCccccCCccc--c----------cc-cc---ccCC
Q 047974           49 QLHDKVAQILEKTKGSFMIKGSWVAQYDMFLTSDPANVQHIMSTNFSKYHKGSEG--R----------KR-FD---IFGE  112 (497)
Q Consensus        49 ~~~~~~~~~~~k~g~v~~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~~~~~~~--~----------~~-~~---~~g~  112 (497)
                      +++.++.++ ++||||+++   ++++.+.++++||+.+++++.++  .|++++..  .          .. ..   ..|.
T Consensus        15 ~p~~~~~~l-~~yGpv~~~---~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (404)
T 1z8o_A           15 DWYRTYAEL-RETAPVTPV---RFLGQDAWLVTGYDEAKAALSDL--RLSSDPKKKYPGVEVEFPAYLGFPEDVRNYFAT   88 (404)
T ss_dssp             SHHHHHHHH-HHHCSEEEE---EETTEEEEEECSHHHHHHHHHCT--TEECCTTCCCTTCCCCCGGGTTCCHHHHHHHSS
T ss_pred             CcHHHHHHH-HhcCCeeee---cCCCceEEEEcCHHHHHHHHcCC--Cccccccccccccccccccccccccchhhhccc
Confidence            478888888 999999999   88888999999999999999875  57766543  2          11 11   1355


Q ss_pred             cCeeecCCchHHHHHHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHH-HHHHHHHHHHhhcCCC
Q 047974          113 TGLFNSDFDEWKHQRKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLL-KRTTFDFACLIATGHN  191 (497)
Q Consensus       113 ~~l~~~~~~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~v~~~~~fG~~  191 (497)
                       +++..+|+.|+++|++++++|+++.++.+. +.+.+. .+.+.+.+..    ++++|+...+ ..+++++++. +||.+
T Consensus        89 -~l~~~~g~~h~~~R~~~~~~fs~~~l~~~~-~~i~~~-~~~l~~~l~~----~~~~d~~~~~~~~~~~~vi~~-~~G~~  160 (404)
T 1z8o_A           89 -NMGTSDPPTHTRLRKLVSQEFTVRRVEAMR-PRVEQI-TAELLDEVGD----SGVVDIVDRFAHPLPIKVICE-LLGVD  160 (404)
T ss_dssp             -SGGGCCTTHHHHHHHHHHTTSCHHHHHHTH-HHHHHH-HHHHHHTSCS----SSEEEHHHHTTTHHHHHHHHH-HTTCC
T ss_pred             -ccccCCCcHHHHHHHHHHHhhCHHHHHHHH-HHHHHH-HHHHHHhhhh----cCCcchHHHHhHHHHHHHHHH-HhCCC
Confidence             788899999999999999999999998864 445555 3444444432    4689998765 6899999998 48986


Q ss_pred             CCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccccccccchhhHHHHHhcC-CC
Q 047974          192 PNSLSVGFPEMGFPDAVDDACEAILIRHLEKKLANGWRTIDQFWEKQKSMKQEEIEKGMEAKEDEGIYSLLNCYLSG-HE  270 (497)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~dll~~ll~~-~~  270 (497)
                      .+.      ...+.+.+..+.. ..... .++..++.+.+.+++.+.|+++++.           ..+|+++.+++. .+
T Consensus       161 ~~~------~~~~~~~~~~~~~-~~~p~-~~~~~~~~~~~~~~~~~~i~~r~~~-----------~~~dll~~ll~~~~~  221 (404)
T 1z8o_A          161 EKY------RGEFGRWSSEILV-MDPER-AEQRGQAAREVVNFILDLVERRRTE-----------PGDDLLSALIRVQDD  221 (404)
T ss_dssp             GGG------TTTHHHHHHHHHC-CCGGG-HHHHHHHHHHHHHHHHHHHHHHHHS-----------CCSSHHHHHHHCEET
T ss_pred             HHH------HHHHHHHHHHHhc-cCChh-HHHHHHHHHHHHHHHHHHHHHHHhC-----------CCCCHHHHHHhhhcc
Confidence            531      2345554443332 10001 3455667778888888888887641           246899999986 43


Q ss_pred             CCCCCCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhhcccCCCCCCCCCChhhhhcchhHHHH
Q 047974          271 VTGPTPAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRNFSQEGFNKPPLVRLNELNKLVYLHAA  350 (497)
Q Consensus       271 ~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~l~~lp~l~a~  350 (497)
                       ++..++++++..++..+++||+|||+++++|++++|++||++|+++++|++                       |++||
T Consensus       222 -~~~~l~~~ei~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~-----------------------~l~a~  277 (404)
T 1z8o_A          222 -DDGRLSADELTSIALVLLLAGFEASVSLIGIGTYLLLTHPDQLALVRRDPS-----------------------ALPNA  277 (404)
T ss_dssp             -TTEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG-----------------------GHHHH
T ss_pred             -cCCCCCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHCHHHHHHHHhCHH-----------------------hHHHH
Confidence             344589999999999999999999999999999999999999999999853                       78999


Q ss_pred             HHHhhcCCCCCCcccccccCCCcccCCeeeCCCcEEEEeccccccCCCCCCCCCCCCCCCCccCCCCCccCCCCCccccc
Q 047974          351 LCETLRLYPPVPFEIRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWGEDCREFKPERWITEDGRIRHEPPHKFFSF  430 (497)
Q Consensus       351 i~E~lRl~p~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~F  430 (497)
                      |+|+||++|+++...|.+.+|.++ +||.|||||.|+++.+++||||++| +||++|+||||.           ..++||
T Consensus       278 i~E~lRl~p~~~~~~R~~~~d~~l-~g~~Ip~Gt~V~~~~~~~~rd~~~~-~dP~~F~PeR~~-----------~~~~~F  344 (404)
T 1z8o_A          278 VEEILRYIAPPETTTRFAAEEVEI-GGVAIPQYSTVLVANGAANRDPKQF-PDPHRFDVTRDT-----------RGHLSF  344 (404)
T ss_dssp             HHHHHHHTCSSCCEEEEESSCEEE-TTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTSCC-----------TTCCTT
T ss_pred             HHHHHHhcCCccCcceEECCCEEE-CCEEECCCCEEEecchhhcCCcccC-CChhhcCCCCCC-----------CCccCC
Confidence            999999999999778888877666 9999999999999999999999999 999999999983           358999


Q ss_pred             CCCCCCCcchHHHHHHHHHHHHHHHhhc-eEEeecC-ccceeeeeEEEeecCceEEEE
Q 047974          431 NAGPRICIGKDIAFTLMKATAASIIHNY-DVQVVKN-HPVTYNLSIGFRMKHGLLARV  486 (497)
Q Consensus       431 g~G~r~C~G~~~A~~~~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  486 (497)
                      |+|+|.|+|++||++|++++++.|+++| ++++.++ .+.....+.++++..+++|++
T Consensus       345 G~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~l~v~~  402 (404)
T 1z8o_A          345 GQGIHFCMGRPLAKLEGEVALRALFGRFPALSLGIDADDVVWRRSLLLRGIDHLPVRL  402 (404)
T ss_dssp             CSSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCCCCCSSSCCCSCCEEET
T ss_pred             CCCCccCCcHHHHHHHHHHHHHHHHHhCCCcEecCCCCcceeccccccCCcceeEEEe
Confidence            9999999999999999999999999999 5999764 233344455667778888875


No 45 
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A*
Probab=100.00  E-value=3.4e-59  Score=450.63  Aligned_cols=380  Identities=13%  Similarity=0.120  Sum_probs=281.6

Q ss_pred             HHHHHHHHHHHhCCeeEEeeecccCcceEEEcChhhHHHhhhcCCccccCCccccccccccCCcCeeecCCchHHHHHHh
Q 047974           50 LHDKVAQILEKTKGSFMIKGSWVAQYDMFLTSDPANVQHIMSTNFSKYHKGSEGRKRFDIFGETGLFNSDFDEWKHQRKL  129 (497)
Q Consensus        50 ~~~~~~~~~~k~g~v~~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~w~~~R~~  129 (497)
                      ++.++..+ ++||||+++   ..++  .++|++|+.+++|++++ ..|.+++........+|..+++..+|+.|+++|++
T Consensus        55 p~~~~~~l-r~~gpv~~~---~~~~--~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~l~~~dg~~h~~~Rr~  127 (441)
T 3nc3_A           55 PYAYFSQL-REEDPVHYE---ESID--SYFISRYHDVRYILQHP-DIFTTKSLVERAEPVMRGPVLAQMHGKEHSAKRRI  127 (441)
T ss_dssp             GGGTHHHH-HHHCSEEEE---TTTT--EEEECCHHHHHHHHHCT-TTEECCCTTSCCCCSCC-------------CCHHH
T ss_pred             hHHHHHHH-HhcCCEEEe---CCCC--EEEEcCHHHHHHHhcCc-ccccccccccccccccCCCccccCCcHHHHHHHHH
Confidence            55566665 689999988   5444  89999999999999886 45877665443334455535888999999999999


Q ss_pred             hhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHH-HHHHHHHHHHHhhcCCCCCCCCCCCCCCChHHHH
Q 047974          130 ARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDL-LKRTTFDFACLIATGHNPNSLSVGFPEMGFPDAV  208 (497)
Q Consensus       130 ~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~-~~~~~~~v~~~~~fG~~~~~~~~~~~~~~~~~~~  208 (497)
                      +.++|+++.++.+. +.+++. .+.+.+.+.    .++.+|+... ...++.++++. +||.+...      ...+.+..
T Consensus       128 ~~~~fs~~~l~~~~-~~i~~~-~~~ll~~l~----~~~~~dl~~~~~~~~~~~vi~~-l~G~~~~~------~~~~~~~~  194 (441)
T 3nc3_A          128 VVRSFIGDALDHLS-PLIKQN-AENLLAPYL----ERGKSDLVNDFGKTFAVCVTMD-MLGLDKRD------HEKISEWH  194 (441)
T ss_dssp             HHHHHHHTHHHHHH-HHHHHH-HHHHHTTTT----TTTEEECCCCCHHHHHHHHHHH-HTTCCGGG------HHHHHHHH
T ss_pred             HHhhcCHHHHHHHH-HHHHHH-HHHHHHHHH----hcCCCcHHHHHHHHHHHHHHHH-HcCCCHHH------HHHHHHHH
Confidence            99999999999865 445555 344444443    2356887544 45688999998 57875421      12233333


Q ss_pred             HHHHHHHH----HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccccccccchhhHHHHHhcCCCCCCCCCchHHHHHH
Q 047974          209 DDACEAIL----IRHLEKKLANGWRTIDQFWEKQKSMKQEEIEKGMEAKEDEGIYSLLNCYLSGHEVTGPTPAEKVMRDN  284 (497)
Q Consensus       209 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~l~~~~i~~~  284 (497)
                      ..+.....    .........++.+.+.+++.+.|+++++           ...+|+++.+++... ++..++++++.++
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~rr~-----------~~~~Dll~~Ll~~~~-~~~~ls~~el~~~  262 (441)
T 3nc3_A          195 SGVADFITSISQSPEARAHSLWCSEQLSQYLMPVIKERRV-----------NPGSDLISILCTSEY-EGMALSDKDILAL  262 (441)
T ss_dssp             HHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTT-----------SCCSSHHHHHCC-------CCCHHHHHHH
T ss_pred             HHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHHHh-----------CCCCCHHHHHHHhhc-cCCCCCHHHHHHH
Confidence            33332211    1112345667778888888888887754           235689999998754 3456999999999


Q ss_pred             HHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhhcccCCCCCCCCCChhhhhcchhHHHHHHHhhcCCCCCCcc
Q 047974          285 ITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRNFSQEGFNKPPLVRLNELNKLVYLHAALCETLRLYPPVPFE  364 (497)
Q Consensus       285 ~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~  364 (497)
                      ++.+++||+|||+.+++|++++|++||++|+++++|+                       +|+++||+|+||++|+++..
T Consensus       263 ~~~ll~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E~-----------------------~~l~a~i~E~LRl~pp~~~~  319 (441)
T 3nc3_A          263 ILNVLLAATEPADKTLALMIYHLLNNPEQMNDVLADR-----------------------SLVPRAIAETLRYKPPVQLI  319 (441)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHHHCG-----------------------GGHHHHHHHHHHHSCSBCEE
T ss_pred             HHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhCH-----------------------HHHHHHHHHhhhcCCcccCc
Confidence            9999999999999999999999999999999999975                       38999999999999999997


Q ss_pred             cccccCCCcccCCeeeCCCcEEEEeccccccCCCCCCCCCCCCCCCCccCCCCCccCCCCCcccccCCCCCCCcchHHHH
Q 047974          365 IRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWGEDCREFKPERWITEDGRIRHEPPHKFFSFNAGPRICIGKDIAF  444 (497)
Q Consensus       365 ~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~  444 (497)
                      .|.+.+|.++ +||.||||+.|+++.+++||||++| +||++|||+||+..+... ......|+|||+|+|.|+|++||+
T Consensus       320 ~R~~~~d~~l-~G~~Ip~Gt~V~~~~~~~~rdp~~f-~dP~~F~PeR~~~~~~~~-~~~~~~~l~FG~G~r~C~G~~lA~  396 (441)
T 3nc3_A          320 PRQLSQDTVV-GGMEIKKDTIVFCMIGAANRDPEAF-EQPDVFNIHREDLGIKSA-FSGAARHLAFGSGIHNCVGTAFAK  396 (441)
T ss_dssp             EEEESSCEES-SSCEECTTCEEEEEHHHHHTCTTTS-SSTTSCCTTCTTSCGGGT-TSSSCSSCTTCCGGGCCTTHHHHH
T ss_pred             cEEECCCEEE-CCEEECCCCEEEechHHhcCChhhC-CCcccCCCCCCCcccccc-cCCCCCcccCCCCCccCCCHHHHH
Confidence            7888877666 9999999999999999999999999 999999999997653221 112578999999999999999999


Q ss_pred             HHHHHHHHHHHhhc-eEEeecCccceeeeeEEEeecCceEEEEEe
Q 047974          445 TLMKATAASIIHNY-DVQVVKNHPVTYNLSIGFRMKHGLLARVSK  488 (497)
Q Consensus       445 ~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  488 (497)
                      +|++++++.|+++| ++++.++. .....+.+.+....++|+++|
T Consensus       397 ~e~~~~l~~ll~~f~~~~l~~~~-~~~~~~~~~~~~~~lpv~~~~  440 (441)
T 3nc3_A          397 NEIEIVANIVLDKMRNIRLEEDF-CYAESGLYTRGPVSLLVAFDG  440 (441)
T ss_dssp             HHHHHHHHHHHHHSTTCEECTTC-CCCEECSSBCEESCCEEECC-
T ss_pred             HHHHHHHHHHHHhCcccEECCCC-cccccCccccCcceeEEEEec
Confidence            99999999999999 99998653 334455566777889998875


No 46 
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis}
Probab=100.00  E-value=4.3e-58  Score=438.44  Aligned_cols=373  Identities=13%  Similarity=0.106  Sum_probs=294.3

Q ss_pred             chHHHHHHHHHHHhCCeeEEeeecccCcceEEEcChhhHHHhhhcCCccccCCccccccccccCCcCeeecCCchHHHHH
Q 047974           48 NQLHDKVAQILEKTKGSFMIKGSWVAQYDMFLTSDPANVQHIMSTNFSKYHKGSEGRKRFDIFGETGLFNSDFDEWKHQR  127 (497)
Q Consensus        48 ~~~~~~~~~~~~k~g~v~~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~w~~~R  127 (497)
                      .+++.++.++++ |||||++   .  . +.++++||+++++++.++ ..|++++... .....+. +++..+|+.|+++|
T Consensus        18 ~~p~~~~~~l~~-~Gpv~~~---~--~-~~vvv~~~~~v~~vl~~~-~~f~~~~~~~-~~~~~~~-~l~~~~g~~h~~~R   87 (398)
T 2xkr_A           18 REARAAYRWMRA-NQPVFRD---R--N-GLAAASTYQAVIDAERQP-ELFSNAGGIR-PDQPALP-MMIDMDDPAHLLRR   87 (398)
T ss_dssp             TTHHHHHHHHHH-HCSEEEC---T--T-CCEEECSHHHHHHHHTCT-TTEESTTCSS-TTSCCCS-SGGGCCTTHHHHHH
T ss_pred             cChhHHHHHHHh-cCCeeec---C--C-CeEEEecHHHHHHHHhCc-ccccCccccC-Ccccccc-cccccCchHHHHHH
Confidence            357888888876 9999866   3  2 899999999999999875 4687765433 2233455 88889999999999


Q ss_pred             HhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHH-HHHHHHHHHHHHhhcCCCCCCCCCCCCCCChHH
Q 047974          128 KLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQD-LLKRTTFDFACLIATGHNPNSLSVGFPEMGFPD  206 (497)
Q Consensus       128 ~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~-~~~~~~~~v~~~~~fG~~~~~~~~~~~~~~~~~  206 (497)
                      ++++++|+++.++.+. +.+.+. .+.+.+.+.+    ++.+|+.. +...+++++++.+ ||.+.+.      ...+.+
T Consensus        88 ~~~~~~fs~~~l~~~~-~~i~~~-~~~l~~~l~~----~~~~d~~~~~~~~~~~~vi~~~-fG~~~~~------~~~~~~  154 (398)
T 2xkr_A           88 KLVNAGFTRKRVKDKE-ASIAAL-CDTLIDAVCE----RGECDFVRDLAAPLPMAVIGDM-LGVRPEQ------RDMFLR  154 (398)
T ss_dssp             HHHGGGSCHHHHHTTH-HHHHHH-HHHHHHTTTT----TSEEEHHHHTTTHHHHHHHHHH-HTCCGGG------HHHHHH
T ss_pred             HHhhhhhCHHHHHHHH-HHHHHH-HHHHHHhhhh----cCCccHHHHHHHHHHHHHHHHH-hCCCHHH------HHHHHH
Confidence            9999999999998865 445555 4445454432    24799994 4568999999998 9987531      122333


Q ss_pred             HHHHHHHHHHH---HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccccccccchhhHHHHHhcCCCCCCCCCchHHHHH
Q 047974          207 AVDDACEAILI---RHLEKKLANGWRTIDQFWEKQKSMKQEEIEKGMEAKEDEGIYSLLNCYLSGHEVTGPTPAEKVMRD  283 (497)
Q Consensus       207 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~l~~~~i~~  283 (497)
                      ....+......   ....++..++.+.+.+++.+.|+++++           ....|+++.+++... ++..++++++..
T Consensus       155 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~r~~-----------~~~~dll~~ll~~~~-~~~~ls~~ei~~  222 (398)
T 2xkr_A          155 WSDDLVTFLSSHVSQEDFQITMDAFAAYNDFTRATIAARRA-----------DPTDDLVSVLVSSEV-DGERLSDDELVM  222 (398)
T ss_dssp             HHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------SCCSSHHHHHHHCCB-TTBCCCHHHHHH
T ss_pred             HHHHHHhccCcccchhhHHHHHHHHHHHHHHHHHHHHHHHh-----------CCCCCHHHHHHHhhc-cCCCCCHHHHHH
Confidence            33333222110   011345566777888888888888765           124789999998754 345699999999


Q ss_pred             HHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhhcccCCCCCCCCCChhhhhcchhHHHHHHHhhcCCCCCCc
Q 047974          284 NITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRNFSQEGFNKPPLVRLNELNKLVYLHAALCETLRLYPPVPF  363 (497)
Q Consensus       284 ~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~  363 (497)
                      ++..+++||+|||+.+++|++++|++||++|+++++|++                       |++|||+|+||++|+++.
T Consensus       223 ~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E~~-----------------------~l~a~i~E~lRl~p~~~~  279 (398)
T 2xkr_A          223 ETLLILIGGDETTRHTLSGGTEQLLRNRDQWDLLQRDPS-----------------------LLPGAIEEMLRWTAPVKN  279 (398)
T ss_dssp             HHHHHHHHHSHHHHHHHHHHHHHHHHSHHHHHHHHHCGG-----------------------GHHHHHHHHHHHHCSBCE
T ss_pred             HHHHHHHHhhHHHHHHHHHHHHHHHHCHHHHHHHHhCHH-----------------------HHHHHHHHHHhhcccccC
Confidence            999999999999999999999999999999999999865                       789999999999999998


Q ss_pred             ccccccCCCcccCCeeeCCCcEEEEeccccccCCCCCCCCCCCCCCCCccCCCCCccCCCCCcccccCCCCCCCcchHHH
Q 047974          364 EIRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWGEDCREFKPERWITEDGRIRHEPPHKFFSFNAGPRICIGKDIA  443 (497)
Q Consensus       364 ~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A  443 (497)
                      ..|.+.+|.++ +||.|||||.|+++.+++||||++| +||++|+||||.           ..++|||+|+|.|+|++||
T Consensus       280 ~~R~~~~d~~l-~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~-----------~~~l~FG~G~r~C~G~~lA  346 (398)
T 2xkr_A          280 MCRVLTADTEF-HGTALCAGEKMMLLFESANFDEAVF-CEPEKFDVQRNP-----------NSHLAFGFGTHFCLGNQLA  346 (398)
T ss_dssp             EEEEESSCEEE-TTEEECTTCEEEEEHHHHHTCTTTS-SSTTSCCTTCSS-----------CCCCTTCCSTTCCTTHHHH
T ss_pred             cceEECCCeeE-CCEEECCCCEEEeChhhhcCChhhC-CCCCeeCCCCCC-----------CCCCcCCCCCcCCcCHHHH
Confidence            77888887666 9999999999999999999999999 999999999974           1489999999999999999


Q ss_pred             HHHHHHHHHHHHhhc-eEEeecCccce-eeeeEEEeecCceEEEEEecCC
Q 047974          444 FTLMKATAASIIHNY-DVQVVKNHPVT-YNLSIGFRMKHGLLARVSKRSA  491 (497)
Q Consensus       444 ~~~~~~~l~~ll~~f-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~r~~  491 (497)
                      ++|++++++.|+++| ++++.++.+.. .......+.+.+++|+++||++
T Consensus       347 ~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~lpv~~~p~~r  396 (398)
T 2xkr_A          347 RLELSLMTERVLRRLPDLRLVADDSVLPLRPANFVSGLESMPVVFTPSPP  396 (398)
T ss_dssp             HHHHHHHHHHHHHHSTTCEESCTTCCCCBCCCSSBCCBSCCEEECCCCCC
T ss_pred             HHHHHHHHHHHHHhCCCceECCCcceecccCcccccCccceeEEecCCCC
Confidence            999999999999999 59997533221 0234455667789999998864


No 47 
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=100.00  E-value=2.1e-59  Score=448.62  Aligned_cols=374  Identities=12%  Similarity=0.145  Sum_probs=293.5

Q ss_pred             hHHHHHHHHHHHhCCeeEEeeecc-cCcceEEEcChhhHHHhhhcCCccccCCc-cccc-----ccc---c----c-CCc
Q 047974           49 QLHDKVAQILEKTKGSFMIKGSWV-AQYDMFLTSDPANVQHIMSTNFSKYHKGS-EGRK-----RFD---I----F-GET  113 (497)
Q Consensus        49 ~~~~~~~~~~~k~g~v~~~~~~~~-~~~~~v~v~~p~~v~~il~~~~~~~~~~~-~~~~-----~~~---~----~-g~~  113 (497)
                      +++.++.++ ++||||+++   ++ ++.+.++++||+++++++.++  .+.+++ .+..     ...   +    . +. 
T Consensus        18 ~p~~~~~~l-~~yGpv~~~---~~~g~~~~vvv~~~~~v~~vl~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-   90 (411)
T 1gwi_A           18 DLDGESARL-RAAGPLAAV---ELPGGVPVWAVTHHAEAKALLTDP--RLVKDINVWGAWRRGEIPADWPLIGLANPGR-   90 (411)
T ss_dssp             CHHHHHHHH-HHTCSEEEE---EETTTEEEEEECSHHHHHHHHTCT--TEECCGGGCHHHHTTCSCTTCTTHHHHSCCS-
T ss_pred             ChHHHHHHH-HHhCCeeee---ecCCCccEEEEeCHHHHHHHHcCC--ccccCcccccccccccCCcccchhhhhcccc-
Confidence            467788888 999999999   76 788999999999999999875  244443 1111     000   1    2 44 


Q ss_pred             CeeecCCchHHHHHHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHHH-HHHHHHHHHhhcCCCC
Q 047974          114 GLFNSDFDEWKHQRKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLLK-RTTFDFACLIATGHNP  192 (497)
Q Consensus       114 ~l~~~~~~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~-~~~~~v~~~~~fG~~~  192 (497)
                      ++++.+|+.|+++|+++.++|+++.++.+. +.+++. .+.+.+.+.+   .++++|+.+.+. .+++++++. +||.+.
T Consensus        91 ~l~~~~g~~h~~~R~~~~~~fs~~~l~~~~-~~i~~~-~~~l~~~l~~---~~~~~d~~~~~~~~~~~~vi~~-~~G~~~  164 (411)
T 1gwi_A           91 SMLTVDGAEHRRLRTLVAQALTVRRVEHMR-GRITEL-TDRLLDELPA---DGGVVDLKAAFAYPLPMYVVAD-LMGIEE  164 (411)
T ss_dssp             SGGGCCHHHHHHHHHHHTTTSCHHHHHTTH-HHHHHH-HHHHHHTSCC---SCCCEEHHHHTTTHHHHHHHHH-HHTCCG
T ss_pred             ccccCCcHHHHHHHHHHHHhcCHHHHHHHH-HHHHHH-HHHHHHHHHH---cCCCcchHHHHhhHHHHHHHHH-HhCCCH
Confidence            788899999999999999999999998864 445555 4555555442   356899998886 599999996 689864


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccccccccchhhHHHHHhcCCCCC
Q 047974          193 NSLSVGFPEMGFPDAVDDACEAILIRHLEKKLANGWRTIDQFWEKQKSMKQEEIEKGMEAKEDEGIYSLLNCYLSGHEVT  272 (497)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~  272 (497)
                      +.      ...+.+.+..+....   ...++..++.+.+.+++.+.|+++++           ....|+++.+++..+ +
T Consensus       165 ~~------~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~~r~~-----------~~~~d~l~~ll~~~~-~  223 (411)
T 1gwi_A          165 AR------LPRLKVLFEKFFSTQ---TPPEEVVATLTELASIMTDTVAAKRA-----------APGDDLTSALIQASE-N  223 (411)
T ss_dssp             GG------HHHHHHHHHHHHCTT---SCHHHHHHHHHHHHHHHHHHHHHHHH-----------SCCSSHHHHHHHCCB-T
T ss_pred             HH------HHHHHHHHHHHhccC---CChHHHHHHHHHHHHHHHHHHHHHHh-----------CCCCCHHHHHHHhcc-c
Confidence            31      112333322222100   01245566778888889888887764           124689999998754 2


Q ss_pred             CCCCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhhcccCCCCCCCCCChhhhhcchhHHHHHH
Q 047974          273 GPTPAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRNFSQEGFNKPPLVRLNELNKLVYLHAALC  352 (497)
Q Consensus       273 ~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~  352 (497)
                      +..++++++.+++..+++||+|||+++++|++++|++||++|+++++|+                       +|++|||+
T Consensus       224 ~~~l~~~~i~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~-----------------------~~l~a~i~  280 (411)
T 1gwi_A          224 GDHLTDAEIVSTLQLMVAAGHETTISLIVNAVVNLSTHPEQRALVLSGE-----------------------AEWSAVVE  280 (411)
T ss_dssp             TBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTTS-----------------------SCHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhChHHHHHHHcCh-----------------------HHHHHHHH
Confidence            4568999999999999999999999999999999999999999999863                       26899999


Q ss_pred             HhhcCCCCCCc-ccccccCCCcccCCeeeCCCcEEEEeccccccCCCCCCCCCCCCCCCCccCCCCCccCCCCCcccccC
Q 047974          353 ETLRLYPPVPF-EIRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWGEDCREFKPERWITEDGRIRHEPPHKFFSFN  431 (497)
Q Consensus       353 E~lRl~p~~~~-~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg  431 (497)
                      |+||++|+++. ..|.+.+|.++ +||.|||||.|+++.+++||||++||+||++|+||||.+          ..++|||
T Consensus       281 E~lRl~p~~~~~~~R~~~~d~~~-~G~~Ip~Gt~V~~~~~~~~rdp~~~G~dP~~F~PeRf~~----------~~~lpFG  349 (411)
T 1gwi_A          281 ETLRFSTPTSHVLIRFAAEDVPV-GDRVIPAGDALIVSYGALGRDERAHGPTADRFDLTRTSG----------NRHISFG  349 (411)
T ss_dssp             HHHHHSCSBCCEEEEEESSCEEE-TTEEECTTCEEEECHHHHTTCHHHHCGGGGSCCTTCCCS----------SCCCTTC
T ss_pred             HHHHhCCcccCCceeeeCCCeEE-CCEEECCCCEEEecHHHhcCChhhcCCChhhcCCCCCCC----------CCcccCC
Confidence            99999999995 67887777666 999999999999999999999999999999999999942          3689999


Q ss_pred             CCCCCCcchHHHHHHHHHHHHHHHhhc-eEEeecC-ccceeeeeEEEeecCceEEEEEecC
Q 047974          432 AGPRICIGKDIAFTLMKATAASIIHNY-DVQVVKN-HPVTYNLSIGFRMKHGLLARVSKRS  490 (497)
Q Consensus       432 ~G~r~C~G~~~A~~~~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~r~  490 (497)
                      +|+|.|+|++||++|++++++.|+++| ++++..+ .+.......+.++..+++|++++|.
T Consensus       350 ~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~lpv~~~~r~  410 (411)
T 1gwi_A          350 HGPHVCPGAALSRMEAGVALPALYARFPHLDLAVPAAELRNKPVVTQNDLFELPVRLAHHH  410 (411)
T ss_dssp             CSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCBCSCTTBCCBSCCEEESSCC-
T ss_pred             CCcccCCCHHHHHHHHHHHHHHHHHhCccceeCCCcccccccccccccCcceeEEEecCCC
Confidence            999999999999999999999999999 7999743 3333444455677889999999884


No 48 
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=100.00  E-value=7.3e-59  Score=444.97  Aligned_cols=373  Identities=16%  Similarity=0.184  Sum_probs=291.3

Q ss_pred             hHHHHHHHHHHHhCCeeEEeeecccCcceEEEcChhhHHHhhhcCCccccCCcc--ccc---cc---cc----cCCcCee
Q 047974           49 QLHDKVAQILEKTKGSFMIKGSWVAQYDMFLTSDPANVQHIMSTNFSKYHKGSE--GRK---RF---DI----FGETGLF  116 (497)
Q Consensus        49 ~~~~~~~~~~~k~g~v~~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~~~~~~--~~~---~~---~~----~g~~~l~  116 (497)
                      +++..+.++ ++||||+++   ++++.+.++++||+.+++++.++  .+++++.  +..   ..   .+    .+. +++
T Consensus        16 ~p~~~~~~l-~~yGpv~~~---~~~~~~~vvv~~~~~v~~vl~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~   88 (408)
T 1odo_A           16 DHHTEHRTL-REGGPATWV---DVLGVQAWSVSDPVLLKQLLTSS--DVSKDARAHWPAFGEVVGTWPLALWVAVE-NMF   88 (408)
T ss_dssp             THHHHHHHH-HTTCSEEEE---EETTEEEEEECCHHHHHHHTTCT--TEESCHHHHCTTHHHHTTTCTTTHHHHCC-SGG
T ss_pred             ChHHHHHHH-HHhCCeEEe---ccCCCCEEEECCHHHHHHHHcCC--Ccccccccccccccccccccccccccccc-ccc
Confidence            478888889 999999999   77788999999999999999875  3444432  111   10   01    234 788


Q ss_pred             ecCCchHHHHHHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHHH-HHHHHHHHHhhcCCCCCCC
Q 047974          117 NSDFDEWKHQRKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLLK-RTTFDFACLIATGHNPNSL  195 (497)
Q Consensus       117 ~~~~~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~-~~~~~v~~~~~fG~~~~~~  195 (497)
                      ..+|+.|+++|+++.++|++.+++.+. +.+.+. .+.+.+.+.+. .+++++|+.+.+. .+++++++. +||.+.+. 
T Consensus        89 ~~~g~~h~~~R~~~~~~fs~~~l~~~~-~~i~~~-~~~l~~~l~~~-~~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~-  163 (408)
T 1odo_A           89 TAYGPNHRKLRRLVAPAFSARRVDAMR-PAVEAM-VTGLVDRLAEL-PAGEPVDLRQELAYPLPIAVIGH-LMGVPQDR-  163 (408)
T ss_dssp             GCCHHHHHHHHHTTGGGGSHHHHHHHH-HHHHHH-HHHHHHHHHHS-CTTSCEEHHHHTTTHHHHHHHHH-HHTCCHHH-
T ss_pred             ccCChHHHHHHHHhhhhcCHHHHHHHH-HHHHHH-HHHHHHHHHhh-cCCCCcchHHHHhhhhHHHHHHH-HhCCCHHH-
Confidence            899999999999999999999998875 445555 45566666542 2256899999887 599999996 68975421 


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccccccccchhhHHHHHhcCCCCC--C
Q 047974          196 SVGFPEMGFPDAVDDACEAILIRHLEKKLANGWRTIDQFWEKQKSMKQEEIEKGMEAKEDEGIYSLLNCYLSGHEVT--G  273 (497)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~--~  273 (497)
                           ...+.+.+..+....   ....+..++.+.+.+++.+.|+++++.           ..+|+++.+++...++  +
T Consensus       164 -----~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~~r~~~-----------~~~d~l~~ll~~~~~~~~~  224 (408)
T 1odo_A          164 -----RDGFRALVDGVFDTT---LDQAEAQANTARLYEVLDQLIAAKRAT-----------PGDDMTSLLIAARDDEGDG  224 (408)
T ss_dssp             -----HHHHHHHHHHHHCTT---CCHHHHHHHHHHHHHHHHHHHHHHHHS-----------CCSSHHHHHHHHHCC----
T ss_pred             -----HHHHHHHHHHHhccc---CCHHHHHHHHHHHHHHHHHHHHHHhhC-----------CCCCHHHHHHHhccccccc
Confidence                 112222222221100   002455667788888899888877641           2368999999764321  4


Q ss_pred             CCCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhhcccCCCCCCCCCChhhhhcchhHHHHHHH
Q 047974          274 PTPAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRNFSQEGFNKPPLVRLNELNKLVYLHAALCE  353 (497)
Q Consensus       274 ~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E  353 (497)
                      ..++++++.+++..+++||+|||+++++|++++|++||++|+++++|+.                       |++|||+|
T Consensus       225 ~~l~~~ei~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~~-----------------------~l~a~i~E  281 (408)
T 1odo_A          225 DRLSPEELRDTLLLMISAGYETTVNVIDQAVHTLLTRPDQLALVRKGEV-----------------------TWADVVEE  281 (408)
T ss_dssp             -CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHCHHHHHHHHHTSS-----------------------CHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHCHHHHHHHHhCHH-----------------------HHHHHHHH
Confidence            5689999999999999999999999999999999999999999999731                       68999999


Q ss_pred             hhcCCCCCCc-ccccccCCCcccC-CeeeCCCcEEEEeccccccCCCCCCCCCCCCCCCCccCCCCCccCCCCCcccccC
Q 047974          354 TLRLYPPVPF-EIRIPLQPDVLPS-GHQVNQNTHVLISAYSMARMTSVWGEDCREFKPERWITEDGRIRHEPPHKFFSFN  431 (497)
Q Consensus       354 ~lRl~p~~~~-~~r~~~~~~~~~~-g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg  431 (497)
                      +||++|+++. ..|.+.+|.++ + ||.|||||.|+++.+++||||++| +||++|+|||+           ...|+|||
T Consensus       282 ~lRl~p~~~~~~~R~~~~d~~l-~~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dp~~F~PeR~-----------~~~~~pFG  348 (408)
T 1odo_A          282 TLRHEPAVKHLPLRYAVTDIAL-PDGRTIARGEPILASYAAANRHPDWH-EDADTFDATRT-----------VKEHLAFG  348 (408)
T ss_dssp             HHHHSCSBSCEEEEEESSCEEC-TTSCEECTTCEEEECHHHHTTCTTTS-TTTTSCCTTCS-----------CCCCCTTC
T ss_pred             HHhhCCCccCCcceEeCCCeEc-CCCcEECCCCEEEeChhhhcCChhhc-CCccccCCCCC-----------CCCCCCCC
Confidence            9999999995 67888777666 8 999999999999999999999999 99999999993           24689999


Q ss_pred             CCCCCCcchHHHHHHHHHHHHHHHhhc-eEEeecC-ccceeeeeEEEeecCceEEEEEe
Q 047974          432 AGPRICIGKDIAFTLMKATAASIIHNY-DVQVVKN-HPVTYNLSIGFRMKHGLLARVSK  488 (497)
Q Consensus       432 ~G~r~C~G~~~A~~~~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  488 (497)
                      +|+|.|+|++||++|++++++.|+++| ++++.++ .+.....+.+.++..+++|+++|
T Consensus       349 ~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~  407 (408)
T 1odo_A          349 HGVHFCLGAPLARMEVTLALESLFGRFPDLRLADPAEELPPVPSLISNGHQRLPVLLHA  407 (408)
T ss_dssp             SSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESCTTSCCCBCSCSSBCCBSCCEEECC-
T ss_pred             CCCccCCCHHHHHHHHHHHHHHHHHhCCcceecCCccccccccCccccCcccceEEecC
Confidence            999999999999999999999999999 7999743 34444555667778899999875


No 49 
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis}
Probab=100.00  E-value=1.6e-59  Score=449.58  Aligned_cols=370  Identities=12%  Similarity=0.081  Sum_probs=288.8

Q ss_pred             hHHHHHHHHHHHhCCeeEEeeecc-cCcceEEEcChhhHHHhhhcCCccccCCcc---ccc---ccc---ccCCcCeeec
Q 047974           49 QLHDKVAQILEKTKGSFMIKGSWV-AQYDMFLTSDPANVQHIMSTNFSKYHKGSE---GRK---RFD---IFGETGLFNS  118 (497)
Q Consensus        49 ~~~~~~~~~~~k~g~v~~~~~~~~-~~~~~v~v~~p~~v~~il~~~~~~~~~~~~---~~~---~~~---~~g~~~l~~~  118 (497)
                      +++..+.++ ++||+|+++   ++ ++.++++++||+.+++++.++  .+.+.+.   +..   ...   ..+. ++++.
T Consensus        25 ~p~~~~~~l-~~yGpv~~~---~~~g~~~~vvv~~~~~v~~vl~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~   97 (408)
T 3abb_A           25 QPPKAYEER-RGESPLTQV---TLFDGRPAWLITGHAEGRALLVDP--RLSSDWGHPDFPVVVRRTEDRGGLAF-PLIGV   97 (408)
T ss_dssp             SCCHHHHHH-CCSSSEEEE---ECTTSCEEEEECCHHHHHHHHTCT--TEECCTTSTTCCCCC---------CC-TTTTC
T ss_pred             CchHHHHHH-HhcCCeeee---ecCCCCcEEEEeCHHHHHHHHcCC--CcccccccccccccccCCcccccccc-ccccC
Confidence            367788888 899999999   87 889999999999999999874  3444432   111   111   1234 67788


Q ss_pred             CCchHHHHHHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHHH-HHHHHHHHHhhcCCCCCCCCC
Q 047974          119 DFDEWKHQRKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLLK-RTTFDFACLIATGHNPNSLSV  197 (497)
Q Consensus       119 ~~~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~-~~~~~v~~~~~fG~~~~~~~~  197 (497)
                      +|+.|+++|+++++.|+++.++.+. +.+++. .+.+.+.+..   .++.+|+.+.+. .++.++++. +||.+.+.   
T Consensus        98 ~g~~h~~~R~~~~~~fs~~~l~~~~-~~i~~~-~~~l~~~l~~---~g~~~d~~~~~~~~~~~~vi~~-~~G~~~~~---  168 (408)
T 3abb_A           98 DDPVHARQRRMLIPSFGVKRMNAIR-PRLQSL-VDRLLDDMLA---KGPGADLVSAFALPVPSVAICE-LLGVPYGD---  168 (408)
T ss_dssp             CTTHHHHHHHHHGGGGCHHHHHHHH-HHHHHH-HHHHHHHHHH---TCSCEEHHHHTTTHHHHHHHHH-HHTCCGGG---
T ss_pred             CchHHHHHHHHhhhhcCHHHHHHHH-HHHHHH-HHHHHHHHHh---cCCCeehHHHHHHHHHHHHHHH-HhCCCHHH---
Confidence            9999999999999999999998874 455555 4555555542   346799999886 488999997 68986431   


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccccccccchhhHHHHHhcCCCCCCCCCc
Q 047974          198 GFPEMGFPDAVDDACEAILIRHLEKKLANGWRTIDQFWEKQKSMKQEEIEKGMEAKEDEGIYSLLNCYLSGHEVTGPTPA  277 (497)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~l~  277 (497)
                         ...+.+.+..+....   . .+...++.+.+.+++.+.|+++++.           ..+|+++.+++..+ ++..++
T Consensus       169 ---~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~i~~r~~~-----------~~~d~l~~ll~~~~-~~~~ls  229 (408)
T 3abb_A          169 ---HDFFEECSRNFVGAA---T-SAEADAAFGELYTYLHGLVGRKQAE-----------PEDGLLDELIARQL-EEGDLD  229 (408)
T ss_dssp             ---HHHHHHHHHHHC----------CCSSHHHHHHHHHHHHHHHHHHS-----------CCSSHHHHHHHHHH-TSSSCC
T ss_pred             ---HHHHHHHHHHHhccc---c-hHHHHHHHHHHHHHHHHHHHHHHhC-----------CCCCHHHHHHhccc-CCCCCC
Confidence               112333332222110   0 1334566778888888888877642           23689999987643 234589


Q ss_pred             hHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhhcccCCCCCCCCCChhhhhcchhHHHHHHHhhcC
Q 047974          278 EKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRNFSQEGFNKPPLVRLNELNKLVYLHAALCETLRL  357 (497)
Q Consensus       278 ~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl  357 (497)
                      ++++.+++..+++||+|||+++++|++++|++||++|+++++|++                       |++|||+|+||+
T Consensus       230 ~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~~-----------------------~l~a~i~E~lRl  286 (408)
T 3abb_A          230 HDEVVMIALVLLVAGHETTVNAIALGALTLIQHPEQIDVLLRDPG-----------------------AVSGVVEELLRF  286 (408)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCGGGGGGGGSCHH-----------------------HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHhCHH-----------------------hHHHHHHHHHHh
Confidence            999999999999999999999999999999999999999998754                       789999999999


Q ss_pred             CCCCCcccccccCCCcccCCeeeCCCcEEEEeccccccCCCCCCCCCCCCCCCCccCCCCCccCCCCCcccccCCCCCCC
Q 047974          358 YPPVPFEIRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWGEDCREFKPERWITEDGRIRHEPPHKFFSFNAGPRIC  437 (497)
Q Consensus       358 ~p~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C  437 (497)
                      +|+++...|.+.+|.++ +||.|||||.|+++.+++||||++| +||++|+||||           ...++|||+|+|.|
T Consensus       287 ~p~~~~~~R~~~~d~~~-~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dp~~F~PeR~-----------~~~~~~FG~G~r~C  353 (408)
T 3abb_A          287 TSVSDHIVRMAKEDIEV-GGATIKAGDAVLVSITLMNRDAKAY-ENPDIFDARRN-----------ARHHVGFGHGIHQC  353 (408)
T ss_dssp             HCSSCEEEEEESSCEEE-TTEEECTTCEEEEEHHHHHTCTTTS-SSTTSCCTTSC-----------CTTCCTTCCGGGCC
T ss_pred             cCcccccceEeCCCeEE-CCEEECCCCEEEeChHHhcCCcccC-CCcccCCCCCC-----------CCCCCCCCCCCcCC
Confidence            99999777888777666 9999999999999999999999999 99999999996           23689999999999


Q ss_pred             cchHHHHHHHHHHHHHHHhhc-eEEeecC-ccceeeeeEEEeecCceEEEEEec
Q 047974          438 IGKDIAFTLMKATAASIIHNY-DVQVVKN-HPVTYNLSIGFRMKHGLLARVSKR  489 (497)
Q Consensus       438 ~G~~~A~~~~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~r  489 (497)
                      +|++||++|++++++.|+++| ++++.++ .+.......+.++..+++|++++|
T Consensus       354 ~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~lpv~~~~~  407 (408)
T 3abb_A          354 LGQNLARAELEIALGGLFARIPGLRLAVPLDEVPIKAGHDAQGPIELPVVWHHH  407 (408)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGSCBCCTTSCCSBSCCEEECSCC
T ss_pred             cCHHHHHHHHHHHHHHHHHhCccceecCCccccccccCcccCCcceeEEEeCCC
Confidence            999999999999999999999 8999753 233334445567778999999887


No 50 
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A*
Probab=100.00  E-value=2.8e-59  Score=447.04  Aligned_cols=370  Identities=12%  Similarity=0.096  Sum_probs=290.8

Q ss_pred             hHHHHHHHHHHHhCCeeEEeeecccC--cceEEEcChhhHHHhhhcCCccccCCccccc----ccccc---CCcCeeecC
Q 047974           49 QLHDKVAQILEKTKGSFMIKGSWVAQ--YDMFLTSDPANVQHIMSTNFSKYHKGSEGRK----RFDIF---GETGLFNSD  119 (497)
Q Consensus        49 ~~~~~~~~~~~k~g~v~~~~~~~~~~--~~~v~v~~p~~v~~il~~~~~~~~~~~~~~~----~~~~~---g~~~l~~~~  119 (497)
                      .+|.++..++ +||||+++   ++++  .+.+++++|+.+++|+.+  ..|.+++.+..    ...+.   +. +++..+
T Consensus        28 ~p~~~~~~l~-~~Gpv~~~---~~~~g~~~~~vv~~~~~v~~vl~~--~~f~~~~~~~~~~~~~~~~~~~~~~-~l~~~d  100 (411)
T 2dkk_A           28 EFDPVLAELM-REGPLTRV---RLPHGEGWAWLATRYDDVKAITND--PRFGRAEVTQRQITRLAPHFKPRPG-SLAFAD  100 (411)
T ss_dssp             CCCHHHHHHH-TTCSEEEE---ECSBSBSCEEEECSHHHHHHHTTC--TTEESGGGGGSCBCBSSSCCCCCTT-CSTTCC
T ss_pred             cccHHHHHHH-hcCCeEee---ecCCCceeEEEEcCHHHHHHHHcC--CCcccCCCCCCCccccccchhcccc-ccccCC
Confidence            3457777776 89999998   6544  789999999999999986  36777654421    11232   44 788899


Q ss_pred             CchHHHHHHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHHH-HHHHHHHHHhhcCCCCCCCCCC
Q 047974          120 FDEWKHQRKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLLK-RTTFDFACLIATGHNPNSLSVG  198 (497)
Q Consensus       120 ~~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~-~~~~~v~~~~~fG~~~~~~~~~  198 (497)
                      ++.|+++|++++++|++++++.+.+ .+.+. .+.+.+.+..   .+..+|+...+. .+++++++. +||.+.+..   
T Consensus       101 g~~h~~~R~~~~~~fs~~~l~~~~~-~i~~~-~~~l~~~l~~---~g~~~dl~~~~~~~~~~~vi~~-l~G~~~~~~---  171 (411)
T 2dkk_A          101 QPDHNRLRRAVAGAFTVGATKRLRP-RAQEI-LDGLVDGILA---EGPPADLVERVLEPFPIAVVSE-VMGVPAADR---  171 (411)
T ss_dssp             TTHHHHHHHHHGGGSSHHHHHHHHH-HHHHH-HHHHHHHHHH---HCSCEEHHHHTTTHHHHHHHHH-HHTCCSSHH---
T ss_pred             chHHHHHHHHhhHhhCHHHHHHHHH-HHHHH-HHHHHHHHHh---cCCCeehHHHHHHHHHHHHHHH-HhCCCHHHH---
Confidence            9999999999999999999998754 45555 4555555543   245799998776 699999998 589865310   


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccccccccchhhHHHHHhcCCCCCCCCCch
Q 047974          199 FPEMGFPDAVDDACEAILIRHLEKKLANGWRTIDQFWEKQKSMKQEEIEKGMEAKEDEGIYSLLNCYLSGHEVTGPTPAE  278 (497)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~l~~  278 (497)
                         ..+.+....+.....   ..++..++.+.+.+++.+.|+++++           ...+|+++.+++.  +++..+++
T Consensus       172 ---~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~~~i~~r~~-----------~~~~dll~~ll~~--~~~~~ls~  232 (411)
T 2dkk_A          172 ---ERVHSWTRQIISTSG---GAEAAERAKRGLYGWITETVRARAG-----------SEGGDVYSMLGAA--VGRGEVGE  232 (411)
T ss_dssp             ---HHHHHHHGGGCSSCS---CSHHHHHHHHHHHHHHHHHHHTTTT-----------CCSSCHHHHHHHH--HHTTSSCT
T ss_pred             ---HHHHHHHHHHHhccc---hHHHHHHHHHHHHHHHHHHHHHHHh-----------CCCCCHHHHHHHh--cCCCCCCH
Confidence               111111111100000   0234556777888888888877653           2246899999876  23456899


Q ss_pred             HHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhhcccCCCCCCCCCChhhhhcchhHHHHHHHhhcCC
Q 047974          279 KVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRNFSQEGFNKPPLVRLNELNKLVYLHAALCETLRLY  358 (497)
Q Consensus       279 ~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~  358 (497)
                      +++.+++..+++|| |||+.+++|++++|++||++|++|++|++                       |++|||+|+||++
T Consensus       233 ~el~~~~~~l~~AG-eTta~~l~~~l~~L~~~P~~~~~l~~E~~-----------------------~l~a~i~E~lRl~  288 (411)
T 2dkk_A          233 TEAVGLAGPLQIGG-EAVTHNVGQMLYLLLTRRELMARMRERPG-----------------------ARGTALDELLRWI  288 (411)
T ss_dssp             TSHHHHHHHHHHTH-HHHHHHHHHHHHHHHHSHHHHHHHHHCTT-----------------------CCHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHhh-HHHHHHHHHHHHHHHhCHHHHHHHHhCHH-----------------------HHHHHHHHHHhhC
Confidence            99999999999999 99999999999999999999999999864                       6889999999999


Q ss_pred             CCCC-c-ccccccCCCcccCCeeeCCCcEEEEeccccccCCCCCCCCCCCCCCCCccCCCCCccCCCCCcccccCCCCCC
Q 047974          359 PPVP-F-EIRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWGEDCREFKPERWITEDGRIRHEPPHKFFSFNAGPRI  436 (497)
Q Consensus       359 p~~~-~-~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~  436 (497)
                      |+++ . ..|.+.+|.++ +||.||||+.|+++.+++||||++| +||++|+|+||.           ..++|||+|+|.
T Consensus       289 p~~~~~~~~R~~~~d~~l-~G~~Ip~Gt~V~~~~~~~~rdp~~f-~dp~~F~PeR~~-----------~~~l~FG~G~r~  355 (411)
T 2dkk_A          289 SHRTSVGLARIALEDVEV-HGTRIAAGEPVYVSYLAANRDPDVF-PDPDRIDLDRDP-----------NPHLAYGNGHHF  355 (411)
T ss_dssp             CCBSSCCCCEEESSCEEE-TTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCCSCSS-----------CCCCTTCCSTTS
T ss_pred             CccccCccceEECCCEEE-CCEEECCCCEEEeChhhhcCChhhC-CCCCCCCCCCCC-----------CCCCCCCCCCCC
Confidence            9999 6 77888887666 9999999999999999999999999 999999999984           358999999999


Q ss_pred             CcchHHHHHHHHHHHHHHHhhc-eEEeecC-ccceeeeeEEEeecCceEEEEEecC
Q 047974          437 CIGKDIAFTLMKATAASIIHNY-DVQVVKN-HPVTYNLSIGFRMKHGLLARVSKRS  490 (497)
Q Consensus       437 C~G~~~A~~~~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~r~  490 (497)
                      |+|++||++|++++++.|+++| ++++.++ .+.....+...+++.+++|++++|.
T Consensus       356 C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~~~R~  411 (411)
T 2dkk_A          356 CTGAVLARMQTELLVDTLLERLPGLRLAVPAEQVAWRRKTMIRGPRTLPCTWHHHH  411 (411)
T ss_dssp             CTTHHHHHHHHHHHHHHHHHHSTTCEESSCGGGCCBCCSSSBCCBSCCEEECCCCC
T ss_pred             CcCHHHHHHHHHHHHHHHHHHCCCcEECCCccccccccCcccCCcceeEEEeccCC
Confidence            9999999999999999999999 8999865 2333444456677889999999873


No 51 
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A*
Probab=100.00  E-value=3.1e-57  Score=444.36  Aligned_cols=413  Identities=13%  Similarity=0.135  Sum_probs=284.0

Q ss_pred             ccCCCCCcccchhhHHHHhhc--cc-hHHHHHHHHHHHhCC-eeEEeeecccCc-------ceEEEcChhhHHHhhhcCC
Q 047974           26 KINPTPWNLPLLGMLASVILN--IN-QLHDKVAQILEKTKG-SFMIKGSWVAQY-------DMFLTSDPANVQHIMSTNF   94 (497)
Q Consensus        26 ~~ppgp~~~P~~G~~~~~~~~--~~-~~~~~~~~~~~k~g~-v~~~~~~~~~~~-------~~v~v~~p~~v~~il~~~~   94 (497)
                      +.+|||++||++|++.++...  .. +++.++.++++|||+ ||++   ++++.       ..+++.+....+.++..  
T Consensus         9 ~~iPGp~g~P~iG~~~~~~~~~~~~g~~~~~~~~~~~kyG~~vf~~---~~~~~~~v~~~~~~v~~~~~~~~~~~~~~--   83 (473)
T 3dan_A            9 REIPGSYGIPFFQPIKDRLEYFYGTGGRDEYFRSRMQKYQSTVFRA---NMPPGPFVSSNPKVIVLLDAKSFPILFDV--   83 (473)
T ss_dssp             CCCCCCCCSTTHHHHHHHHHHHHSTTHHHHHHHHHHHHHTCSEEEE---ECTTCTTTCSCCEEEEECSTTTGGGGGCT--
T ss_pred             CCCCCCCCCcchhhHHHHHHHHHhhcCchHHHHhHHHHhCCeEEEe---cCCCCCccccCCceEEeecccccceecCC--
Confidence            357899999999999987532  23 678999999999999 9999   66543       34444555544444431  


Q ss_pred             ccccCCcccc----ccccccC---CcCeeecCCchHHHHHHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCc
Q 047974           95 SKYHKGSEGR----KRFDIFG---ETGLFNSDFDEWKHQRKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKM  167 (497)
Q Consensus        95 ~~~~~~~~~~----~~~~~~g---~~~l~~~~~~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~  167 (497)
                      ....+...+.    ....+.|   ..+++..+++.|+++|+++.+.|++ .+..+. +.+++. .+.+.+.+.....+++
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~h~~~R~~~~~~f~~-~~~~~~-~~i~~~-~~~ll~~~~~~~~~~~  160 (473)
T 3dan_A           84 SKVEKKDLFTGTYMPSTKLTGGYRVLSYLDPSEPRHAQLKNLLFFMLKN-SSNRVI-PQFETT-YTELFEGLEAELAKNG  160 (473)
T ss_dssp             TTEECSSCTTSSSCCCGGGGTTSCCGGGCCTTSHHHHHHHHHHHHHHHH-HHHHHH-HHHHHH-HHHHHHHHHHHHHHHS
T ss_pred             cceeccccccccccCCccccCCCcceeeeCCCcHHHHHHHHHHHHHHHH-HHHHHH-HHHHHH-HHHHHHHHHHHhccCC
Confidence            1111111111    1112333   2256678899999999999999998 477665 445555 3445555544323346


Q ss_pred             eeeHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH----
Q 047974          168 LVDFQDLLKRTTFDFACLIATGHNPNSLSVGFPEMGFPDAVDDACEAILIRHLEKKLANGWRTIDQFWEKQKSMKQ----  243 (497)
Q Consensus       168 ~vdl~~~~~~~~~~v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~----  243 (497)
                      .+|+.+++..+++++++.++||.++...   .....+...+..+........+.       ..+..++...+.+++    
T Consensus       161 ~vdl~~~~~~~~~~~i~~~~~G~~~~~~---~~~~~~~~~~~~~~~~~~~p~~~-------~~lp~~~~~~~~~~~~~~~  230 (473)
T 3dan_A          161 KAAFNDVGEQAAFRFLGRAYFNSNPEET---KLGTSAPTLISSWVLFNLAPTLD-------LGLPWFLQEPLLHTFRLPA  230 (473)
T ss_dssp             CEECHHHHHHHHHHHHHHHHHSCCGGGS---TTTTCHHHHHHHHHHHHHGGGCC-------CSCCHHHHHHHHSSSCCCG
T ss_pred             cccHHHHHHHHHHHHHHHHHcCCCCCch---hhhhhHHHHHHHHHHHhccchhh-------hcchHHHHHHHhhhccchH
Confidence            8999999999999999999999987652   12233333333222111101000       000112222221111    


Q ss_pred             ---HHHHhccccccccchhhHHHHHhcCCCCCCCCCchHHHHHHHHHHH-HhcCcchHHHHHHHHHHHhc-ChHHHHHHH
Q 047974          244 ---EEIEKGMEAKEDEGIYSLLNCYLSGHEVTGPTPAEKVMRDNITALI-FATEGTTSIALTWFFWLVSK-NPFAETKIR  318 (497)
Q Consensus       244 ---~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~l~~~~i~~~~~~~~-~ag~~tt~~~l~~~l~~l~~-~p~~~~~l~  318 (497)
                         +.....    ..+...++++.+++..++  ..++++++..+++.++ ++|++||+.+++|++++|++ ||++|++|+
T Consensus       231 ~~~~~~~~~----~~~~~~~~~~~ll~~~~~--~~l~~~ei~~~~l~~~g~~~~~tta~~l~~~l~~L~~~~P~~~~~lr  304 (473)
T 3dan_A          231 FLIKSTYNK----LYDYFQSVATPVMEQAEK--LGVPKDEAVHNILFAVCFNTFGGVKILFPNTLKWIGLAGENLHTQLA  304 (473)
T ss_dssp             GGTHHHHHH----HHHHHHHHCHHHHHHHHH--HTCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred             hhhhhchhh----hHHHHHHHHHHHHHhHhh--cCCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhcCHHHHHHHH
Confidence               000000    001123445555554322  3489999998886666 78888899999999999999 899999999


Q ss_pred             HHHHhhcccCCCCCCCCCChhhhhcchhHHHHHHHhhcCCCCCCcccccccCCCccc---CCeeeCCCcEEEEecccccc
Q 047974          319 EELKRNFSQEGFNKPPLVRLNELNKLVYLHAALCETLRLYPPVPFEIRIPLQPDVLP---SGHQVNQNTHVLISAYSMAR  395 (497)
Q Consensus       319 ~Ei~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~---~g~~ip~g~~v~~~~~~~~~  395 (497)
                      +|++++++..   .+..++.+++.+||||+|||+|+||++|+++...|++.+|.++.   +||.||||+.|+++.+++||
T Consensus       305 ~Ei~~~~~~~---~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~~~~~g~~Ip~G~~v~~~~~~~~~  381 (473)
T 3dan_A          305 EEIRGAIKSY---GDGNVTLEAIEQMPLTKSVVYESLRIEPPVPPQYGKAKSNFTIESHDATFEVKKGEMLFGYQPFATK  381 (473)
T ss_dssp             HHHHHHHHHH---STTSCCHHHHHTCHHHHHHHHHHHHHSCSSCEEEEEESSCEEEECSSCEEEECTTCEEEEEHHHHTT
T ss_pred             HHHHHHhhcc---cCCCCCHHHHhcCchHHHHHHHHHhcCCCcccccccccCCcEeecCCCceEeCCCCEEEechHHhhC
Confidence            9999998530   34678999999999999999999999999999888887766554   89999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCccCCCCCcc----CCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhceEEeecCc
Q 047974          396 MTSVWGEDCREFKPERWITEDGRIR----HEPPHKFFSFNAGPRICIGKDIAFTLMKATAASIIHNYDVQVVKNH  466 (497)
Q Consensus       396 d~~~~g~~p~~F~P~Rfl~~~~~~~----~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~  466 (497)
                      ||++| +||++|||+||++.+.+..    -+....+++||+|+|.|+|++||++|++++++.|+++|++...++.
T Consensus       382 dp~~~-~dp~~F~p~R~~~~~~~~~~~~~fg~G~~~~~Fg~G~~~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~  455 (473)
T 3dan_A          382 DPKVF-DRPEEYVPDRFVGDGEALLKYVWWSNGPETESPTVENKQCAGKDFVVLITRLFVIELFRRYDSFEIELG  455 (473)
T ss_dssp             CTTTS-SSTTSCCTTTTSGGGGGGGGGCCTTSSCTTSCCCTTSCSCTTHHHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred             Cchhc-CCcccCCccccCCCcccccccceecCCcCcCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCeEEccCC
Confidence            99999 9999999999997621100    0111234455555599999999999999999999999997776543


No 52 
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A*
Probab=100.00  E-value=3.5e-58  Score=440.28  Aligned_cols=368  Identities=13%  Similarity=0.181  Sum_probs=289.2

Q ss_pred             hHHHHHHHHHHHhCCeeEEeeecc-cCcceEEEcChhhHHHhhhcCCccccCCccc-cc---cccc-cCCcCeeecCCch
Q 047974           49 QLHDKVAQILEKTKGSFMIKGSWV-AQYDMFLTSDPANVQHIMSTNFSKYHKGSEG-RK---RFDI-FGETGLFNSDFDE  122 (497)
Q Consensus        49 ~~~~~~~~~~~k~g~v~~~~~~~~-~~~~~v~v~~p~~v~~il~~~~~~~~~~~~~-~~---~~~~-~g~~~l~~~~~~~  122 (497)
                      +++.++.++ ++||||+++   ++ ++.+.++++||+.+++++.++  .|.+++.+ ..   .... .+. +++..+|+.
T Consensus        38 ~p~~~~~~l-~~yGpv~~~---~~~g~~~~vvv~~~~~i~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~-~l~~~dg~~  110 (417)
T 2y5n_A           38 TLAGRYGEL-QETEPVSRV---RPPYGEEAWLVTRYEDVRAVLGDG--RFVRGPSMTRDEPRTRPEMVKG-GLLSMDPPE  110 (417)
T ss_dssp             CCCHHHHHH-HHHCSEEEE---ECSBSCCEEEECSHHHHHHHHTCT--TEESGGGGTSCCCBSSSSCCCC-SGGGCCTTH
T ss_pred             CchHHHHHH-HhcCCeEee---ccCCCceEEEECCHHHHHHHHcCC--CcccCccccccccccCcccccc-cCccCCchH
Confidence            467788888 899999999   76 789999999999999999874  46666543 21   1122 344 788899999


Q ss_pred             HHHHHHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCc-eeeHHHHHH-HHHHHHHHHhhcCCCCCCCCCCCC
Q 047974          123 WKHQRKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKM-LVDFQDLLK-RTTFDFACLIATGHNPNSLSVGFP  200 (497)
Q Consensus       123 w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~vdl~~~~~-~~~~~v~~~~~fG~~~~~~~~~~~  200 (497)
                      |+++|+++.++|+++.++.+. +.+++. .+.+.+.+..    ++ .+|+...+. .+++++++. +||.+.+.      
T Consensus       111 h~~~R~~l~~~fs~~~l~~~~-~~i~~~-~~~ll~~l~~----~~~~vdl~~~~~~~~~~~vi~~-~~G~~~~~------  177 (417)
T 2y5n_A          111 HSRLRRLVVKAFTARRAESLR-PRAREI-AHELVDQMAA----TGQPADLVAMFARQLPVRVICE-LLGVPSAD------  177 (417)
T ss_dssp             HHHHHHHHHHHSCHHHHHHTH-HHHHHH-HHHHHHHHHH----HCSSEEHHHHTTTTHHHHHHHH-HHTCCGGG------
T ss_pred             HHHHHHHHhhhcCHHHHHHHH-HHHHHH-HHHHHHHHHh----CCCCeeHHHHHHHHhHHHHHHH-HcCCCHHH------
Confidence            999999999999999998864 445555 4555555542    23 799997764 699999997 68986531      


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccccccccchhhHHHHHhcCCCCCCCCCchHH
Q 047974          201 EMGFPDAVDDACEAILIRHLEKKLANGWRTIDQFWEKQKSMKQEEIEKGMEAKEDEGIYSLLNCYLSGHEVTGPTPAEKV  280 (497)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~l~~~~  280 (497)
                      ...+.+....+....  ....++..++.+.+.+++.+.|+++++.           ..+|+++.+++..+ ++..+++++
T Consensus       178 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~i~~r~~~-----------~~~dll~~ll~~~~-~~~~ls~~e  243 (417)
T 2y5n_A          178 HDRFTRWSGAFLSTA--EVTAEEMQEAAEQAYAYMGDLIDRRRKE-----------PTDDLVSALVQARD-QQDSLSEQE  243 (417)
T ss_dssp             HHHHHHHHHTTSTTC--CCCHHHHHHHHHHHHHHHHHHHHHHHHS-----------CCSSHHHHHHHCCB-TTBCCCHHH
T ss_pred             HHHHHHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHHHHHhC-----------CCCCHHHHHHhhhc-cCCCCCHHH
Confidence            111222221111100  0002355677788888898888887652           24689999998754 345699999


Q ss_pred             HHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhhcccCCCCCCCCCChhhhhcchhHHHHHHHhhcCCCC
Q 047974          281 MRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRNFSQEGFNKPPLVRLNELNKLVYLHAALCETLRLYPP  360 (497)
Q Consensus       281 i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~  360 (497)
                      +..++..+++||+|||+++++|++++|++||++|+++++|++                       |++|||+|+||++|+
T Consensus       244 i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~-----------------------~l~a~i~E~lRl~p~  300 (417)
T 2y5n_A          244 LLDLAIGLLVAGYESTTTQIADFVYLLMTRPELRRQLLDRPE-----------------------LIPSAVEELTRWVPL  300 (417)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG-----------------------GHHHHHHHHHHHCCC
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHHHCHHHHHHHHhCHH-----------------------HHHHHHHHHHHhcCC
Confidence            999999999999999999999999999999999999999853                       799999999999999


Q ss_pred             CC--cccccccCCCcccCCeeeCCCcEEEEeccccccCCCCCCCCCCCCCCCCccCCCCCccCCCCCcccccCCCCCCCc
Q 047974          361 VP--FEIRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWGEDCREFKPERWITEDGRIRHEPPHKFFSFNAGPRICI  438 (497)
Q Consensus       361 ~~--~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~  438 (497)
                      ++  ...|.+.+|.++ +||.|||||.|+++.+++||||++| +||++|+||||.           ..++|||+|+|.|+
T Consensus       301 ~~~~~~~R~~~~d~~l-~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~-----------~~~lpFG~G~r~C~  367 (417)
T 2y5n_A          301 GVGTAFPRYAVEDVTL-RGVTIRAGEPVLASTGAANRDQAQF-PDADRIDVDRTP-----------NQHLGFGHGVHHCL  367 (417)
T ss_dssp             BSSCCSCEEESSCEEE-TTEEECTTCEEEECHHHHTTCTTTS-TTTTSCCTTCSS-----------CCCCTTCCSTTSCT
T ss_pred             ccccccceEeCCCEEE-CCEEECCCCEEEeChhhhCCCcccC-CCccccCCCCCC-----------CCcCCCCCCCcCCc
Confidence            99  677888877666 9999999999999999999999999 999999999982           35899999999999


Q ss_pred             chHHHHHHHHHHHHHHHhhc-eEEeecC-ccceeeeeEEEeecCceEEEE
Q 047974          439 GKDIAFTLMKATAASIIHNY-DVQVVKN-HPVTYNLSIGFRMKHGLLARV  486 (497)
Q Consensus       439 G~~~A~~~~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  486 (497)
                      |++||++|++++++.|+++| ++++.++ .+.....+...+....++|++
T Consensus       368 G~~lA~~e~~~~la~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~  417 (417)
T 2y5n_A          368 GAPLARVELQVALEVLLQRLPGIRLGIPETQLRWSEGMLLRGPLELPVVW  417 (417)
T ss_dssp             THHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCBCCCSSBCCBSCCEEEC
T ss_pred             CHHHHHHHHHHHHHHHHHhCCCcEeCCCCccceeccCcccCCcceeEEeC
Confidence            99999999999999999999 6999764 333344455566677787763


No 53 
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A*
Probab=100.00  E-value=1.9e-58  Score=443.52  Aligned_cols=373  Identities=13%  Similarity=0.108  Sum_probs=286.1

Q ss_pred             HHHHHHHHHHHhCCeeEEeeeccc--CcceEEEcChhhHHHhhhcCCccccCCccc--------ccc-------c-cccC
Q 047974           50 LHDKVAQILEKTKGSFMIKGSWVA--QYDMFLTSDPANVQHIMSTNFSKYHKGSEG--------RKR-------F-DIFG  111 (497)
Q Consensus        50 ~~~~~~~~~~k~g~v~~~~~~~~~--~~~~v~v~~p~~v~~il~~~~~~~~~~~~~--------~~~-------~-~~~g  111 (497)
                      ++.++.+++ +||||+++   ++|  +.+.++++||+.+++++.++  .|++++..        ...       . .+.|
T Consensus        22 p~~~~~~l~-~~Gpv~~~---~~g~~~~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (425)
T 2z3t_A           22 PYPVYRRYR-EAAPVHRT---ASGPGKPDTYYVFTYDDVVRVLSNR--RLGRNARVASGDTDTAPVPIPTEHRALRTVVE   95 (425)
T ss_dssp             CHHHHHHHH-HHCSEEEE---CCCSSCCCEEEECSHHHHHHHHHCT--TEESSCCCC---------------CHHHHHHT
T ss_pred             hHHHHHHHH-hcCCeEec---cccCCCCCeEEEcCHHHHHHHHcCC--Cccccccccccccccccccccccccccccccc
Confidence            677788875 59999998   877  78899999999999999874  67776531        111       1 2223


Q ss_pred             CcCeeecCCchHHHHHHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHH-HHHHHHHHHHhhcCC
Q 047974          112 ETGLFNSDFDEWKHQRKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLL-KRTTFDFACLIATGH  190 (497)
Q Consensus       112 ~~~l~~~~~~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~v~~~~~fG~  190 (497)
                      . +++..+|+.|+++||+++++|+++.++.+. +.+++. .+.+.+.+.+   . +.+|+...+ ..+++++++.+ ||.
T Consensus        96 ~-~l~~~dg~~h~~~R~~~~~~fs~~~l~~~~-~~i~~~-~~~ll~~l~~---~-g~~dl~~~~~~~~~~~vi~~~-~G~  167 (425)
T 2z3t_A           96 N-WLVFLDPPHHTELRSLLTTEFSPSIVTGLR-PRIAEL-ASALLDRLRA---Q-RRPDLVEGFAAPLPILVISAL-LGI  167 (425)
T ss_dssp             T-CGGGCCHHHHHHHHHHHHGGGSHHHHHHHH-HHHHHH-HHHHHHHHTT---S-SSCBHHHHTTTHHHHHHHHHH-HTC
T ss_pred             c-ccccCCchHHHHHHHHHHHhhCHHHHHHHH-HHHHHH-HHHHHHHHHh---c-CCccHHHHHHHHHHHHHHHHH-hCC
Confidence            5 788899999999999999999999998875 445555 4555555543   2 378998755 78999999998 998


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHHHHH---HHH-HHHHHHhHHHHHHHHHHHHHHHHHHHHHhccccccccchhhHHHHHh
Q 047974          191 NPNSLSVGFPEMGFPDAVDDACEAIL---IRH-LEKKLANGWRTIDQFWEKQKSMKQEEIEKGMEAKEDEGIYSLLNCYL  266 (497)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~dll~~ll  266 (497)
                      +.+.      ...+.+....+.....   ..+ ..++..++.+.+.+++.+.|+++++.           ..+|+++.++
T Consensus       168 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~-----------~~~dll~~ll  230 (425)
T 2z3t_A          168 PEED------HTWLRANAVALQEASTTRARDGRGYARAEAASQEFTRYFRREVDRRGGD-----------DRDDLLTLLV  230 (425)
T ss_dssp             CGGG------HHHHHHHHHHHHTTCTTCCC---HHHHHHHHHHHHHHHHHHHHCC------------------CHHHHHH
T ss_pred             CHHH------HHHHHHHHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----------CCCCHHHHHH
Confidence            6531      1123333322221100   001 13445667778888888888877652           2468999998


Q ss_pred             cCCCCCCCCCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhhcccCCCCCCCCCChhhhhcchh
Q 047974          267 SGHEVTGPTPAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRNFSQEGFNKPPLVRLNELNKLVY  346 (497)
Q Consensus       267 ~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~l~~lp~  346 (497)
                      +...+ +..++++++.+++..+++||+|||+.+++|++++|++||++|+++++|++                       |
T Consensus       231 ~~~~~-~~~ls~~el~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~-----------------------~  286 (425)
T 2z3t_A          231 RARDT-GSPLSVDGIVGTCVHLLTAGHETTTNFLAKAVLTLRAHRDVLDELRTTPE-----------------------S  286 (425)
T ss_dssp             HHHHT-TCCCCHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHCHHHHHHHHHCGG-----------------------G
T ss_pred             Hhhcc-CCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhChH-----------------------h
Confidence            76432 45689999999999999999999999999999999999999999999854                       8


Q ss_pred             HHHHHHHhhcCCCCCCcccccccCCCcccCCeeeCCCcEEEEeccccccCCCCCCCCCCCCCCCCccCCCCCccCCCCCc
Q 047974          347 LHAALCETLRLYPPVPFEIRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWGEDCREFKPERWITEDGRIRHEPPHK  426 (497)
Q Consensus       347 l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~  426 (497)
                      ++|||+|+||++|+++...|.+.+|.++ +||.|||||.|+++.+++||||++| +||++|+||||.           ..
T Consensus       287 l~a~i~E~lRl~p~~~~~~R~~~~d~~l-~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~-----------~~  353 (425)
T 2z3t_A          287 TPAAVEELMRYDPPVQAVTRWAYEDIRL-GDHDIPRGSRVVALLGSANRDPARF-PDPDVLDVHRAA-----------ER  353 (425)
T ss_dssp             HHHHHHHHHHHSCSBCEEEEEESSCEEE-TTEEECTTCEEEEEHHHHTTCTTTS-SSTTSCCTTSCS-----------SC
T ss_pred             HHHHHHHHHHhCCcccCcceEeCCCeeE-CCEEECCCCEEEeChhhhCCCcccc-CCcccCCCCCCC-----------CC
Confidence            9999999999999999777888877666 9999999999999999999999999 999999999994           25


Q ss_pred             ccccCCCCCCCcchHHHHHHHHHHHHHHHhhc-eEEeecCccceeeeeEEEeecCceEEEEEecCC
Q 047974          427 FFSFNAGPRICIGKDIAFTLMKATAASIIHNY-DVQVVKNHPVTYNLSIGFRMKHGLLARVSKRSA  491 (497)
Q Consensus       427 ~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  491 (497)
                      ++|||+|+|.|+|++||++|++++++.|+++| +++ .++.+.......+.++..+++|++++...
T Consensus       354 ~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~-~~~~~~~~~~~~~~~~~~~lpv~~~~~~~  418 (425)
T 2z3t_A          354 QVGFGLGIHYCLGATLARAEAEIGLRALLDGIPALG-RGAHEVEYADDMVFHGPTRLLLDLPDAAL  418 (425)
T ss_dssp             CCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCGGGG-SSCEEEEECSCSSBCCEEEEEECCC----
T ss_pred             CCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCcCc-cCCCccccccccccCCcceeeEEecchhh
Confidence            89999999999999999999999999999999 899 65432233344556777889999887654


No 54 
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A*
Probab=100.00  E-value=8e-59  Score=447.67  Aligned_cols=394  Identities=12%  Similarity=0.053  Sum_probs=294.1

Q ss_pred             cCCCCCcccchhhHHHHhhccchHHHHHHHHHHHhCCeeEEeeec-----ccCcceEEEcChhhHHHhhhcCCccccCCc
Q 047974           27 INPTPWNLPLLGMLASVILNINQLHDKVAQILEKTKGSFMIKGSW-----VAQYDMFLTSDPANVQHIMSTNFSKYHKGS  101 (497)
Q Consensus        27 ~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~k~g~v~~~~~~~-----~~~~~~v~v~~p~~v~~il~~~~~~~~~~~  101 (497)
                      .||+|.++++++....-  + .+++.++.++ ++||||+++..+.     +|+.++++|++++.+++++++. ..|++++
T Consensus        19 ~p~~~~~~~~~~~~~~~--~-~~p~~~~~~l-r~~gPv~~~~~~~g~~~~lG~~~~~vv~~~~~v~~vl~~~-~~fs~~~   93 (433)
T 3ivy_A           19 SPNLPPGFDFTDPAIYA--E-RLPVAEFAEL-RSAAPIWWNGQDPGKGGGFHDGGFWAITKLNDVKEISRHS-DVFSSYE   93 (433)
T ss_dssp             -CCCCTTCCTTCHHHHT--T-CCCHHHHHHH-HHHCSEEEEECCTTCSTTCCSSEEEEECSHHHHHHHHHCT-TTEESTT
T ss_pred             CCCCCCCCCCCCHHHhh--c-CCccHHHHHH-HhcCCEEecccccccccccCCCCEEEEecHHHHHHHHcCh-hhccCCc
Confidence            67777778877654322  1 2478888888 7899999983210     4557999999999999999765 5677665


Q ss_pred             ccccc----------ccccCCcCeeecCCchHHHHHHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeH
Q 047974          102 EGRKR----------FDIFGETGLFNSDFDEWKHQRKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDF  171 (497)
Q Consensus       102 ~~~~~----------~~~~g~~~l~~~~~~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl  171 (497)
                      .....          ....+. +++..+|+.|+++|+++++.|+++.++.+. +.+++. .+.+.+.+..    ++.+|+
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~-~l~~~dg~~h~~~R~~~~~~fs~~~l~~~~-~~i~~~-~~~ll~~l~~----~~~~d~  166 (433)
T 3ivy_A           94 NGVIPRFKNDIAREDIEVQRF-VMLNMDAPHHTRLRKIISRGFTPRAVGRLH-DELQER-AQKIAAEAAA----AGSGDF  166 (433)
T ss_dssp             TCSCCCCCTTCCHHHHHGGGG-SGGGCCTTHHHHHHHHHGGGSCHHHHHTTH-HHHHHH-HHHHHHHHHH----HCEEEH
T ss_pred             ccccccccccccccccccccC-CccccChHHHHHHHHHHHHhhCHHHHHHHH-HHHHHH-HHHHHHHHhh----CCCeeH
Confidence            43211          122344 888999999999999999999999998865 445555 4445555542    357899


Q ss_pred             HHHH-HHHHHHHHHHhhcCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhcc
Q 047974          172 QDLL-KRTTFDFACLIATGHNPNSLSVGFPEMGFPDAVDDACEAILIRHLEKKLANGWRTIDQFWEKQKSMKQEEIEKGM  250 (497)
Q Consensus       172 ~~~~-~~~~~~v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  250 (497)
                      ...+ ..+++++++.+ ||.+...      ...+.+....+.......+...+..++.+.+.+++.++++++++.     
T Consensus       167 ~~~~~~~~~~~vi~~l-~G~~~~~------~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~r~~~-----  234 (433)
T 3ivy_A          167 VEQVSCELPLQAIAGL-LGVPQED------RGKLFHWSNEMTGNEDPEYAHIDPKASSAELIGYAMKMAEEKAKN-----  234 (433)
T ss_dssp             HHHTTSHHHHHHHHHH-HTCCHHH------HHHHHHHHTTCSCCCCGGGTTCCHHHHHHHHHHHHHHHHHHC--------
T ss_pred             HHHHHHHHHHHHHHHH-cCCCHHH------HHHHHHHHHHHhccCCchhhhHHHHHHHHHHHHHHHHHHHHHhcC-----
Confidence            9998 99999999996 8864210      001111111000000000001134567778888888888887642     


Q ss_pred             ccccccchhhHHHHHhcCCCCCCCCCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhhcccCCC
Q 047974          251 EAKEDEGIYSLLNCYLSGHEVTGPTPAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRNFSQEGF  330 (497)
Q Consensus       251 ~~~~~~~~~dll~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~  330 (497)
                            ..+|+++.+++... ++..++++++..++..+++||+|||+++++|++++|++||++|+++++|++        
T Consensus       235 ------~~~dll~~ll~~~~-~~~~ls~~ei~~~~~~ll~AG~dTTa~~l~~~l~~L~~~P~~~~~l~~E~~--------  299 (433)
T 3ivy_A          235 ------PADDIVTQLIQADI-DGEKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPDQWELYKKVRP--------  299 (433)
T ss_dssp             ----------CHHHHHSCC---CCCCCHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHCHHHHHHHHHHCC--------
T ss_pred             ------CCCcHHHHHHhhhc-CCCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCHHHHHHHHhCcc--------
Confidence                  34689999998754 345699999999999999999999999999999999999999999999964        


Q ss_pred             CCCCCCChhhhhcchhHHHHHHHhhcCCCCCCcccccccCCCcccCCeeeCCCcEEEEeccccccCCCCCCCCCCCCCCC
Q 047974          331 NKPPLVRLNELNKLVYLHAALCETLRLYPPVPFEIRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWGEDCREFKPE  410 (497)
Q Consensus       331 ~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~  410 (497)
                                       ++||+|+||++|+++...|.+.+|.++ +||.||||+.|+++.+++||||++| +||++|+|+
T Consensus       300 -----------------~a~i~E~LRl~p~~~~~~R~~~~d~~l-~G~~Ip~G~~V~~~~~~~~rdp~~f-~dp~~F~p~  360 (433)
T 3ivy_A          300 -----------------ETAADEIVRWATPVTAFQRTALRDYEL-SGVQIKKGQRVVMFYRSANFDEEVF-QDPFTFNIL  360 (433)
T ss_dssp             -----------------TTHHHHHHHHHCSBCEEEEEESSCEEE-TTEEECTTCEEEEEHHHHTTCTTTS-SSTTSCCTT
T ss_pred             -----------------cchhHHHhhhCcchhceeeEECCCEEE-CCEEECCCCEEEEChhhhcCCchhC-CCcCccCCC
Confidence                             389999999999999888888887776 9999999999999999999999999 999999999


Q ss_pred             CccCCCCCccCCCCCcccccC-CCCCCCcchHHHHHHHHHHHHHHHhhce-EEeecCccceeeeeEEEeecCceEEEEEe
Q 047974          411 RWITEDGRIRHEPPHKFFSFN-AGPRICIGKDIAFTLMKATAASIIHNYD-VQVVKNHPVTYNLSIGFRMKHGLLARVSK  488 (497)
Q Consensus       411 Rfl~~~~~~~~~~~~~~~~Fg-~G~r~C~G~~~A~~~~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  488 (497)
                      ||.           ..++||| +|+|.|+|++||++|++++++.|+++|+ +++.++..  .......+....++|++++
T Consensus       361 R~~-----------~~~l~FGg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~--~~~~~~~~g~~~lpv~~~~  427 (433)
T 3ivy_A          361 RNP-----------NPHVGFGGTGAHYCIGANLARMTINLIFNAVADHMPDLKPISAPE--RLRSGWLNGIKHWQVDYTG  427 (433)
T ss_dssp             CCS-----------CCCCTTCSSSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCCE--ECCCSSBCCEEECEEESCC
T ss_pred             CCC-----------CCCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCccEECCCCc--eeccCcccCcceeEEEEec
Confidence            983           3589999 9999999999999999999999999999 99975432  2223334445579999999


Q ss_pred             cCC
Q 047974          489 RSA  491 (497)
Q Consensus       489 r~~  491 (497)
                      |..
T Consensus       428 R~~  430 (433)
T 3ivy_A          428 RCP  430 (433)
T ss_dssp             ---
T ss_pred             ccc
Confidence            865


No 55 
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora}
Probab=100.00  E-value=1.9e-58  Score=440.82  Aligned_cols=367  Identities=16%  Similarity=0.155  Sum_probs=287.6

Q ss_pred             HHHHHHHHHHHhCCeeEEeeecccCcceEEEcChhhHHHhhhcCCccccCCccccc---------cccccCCcCeeecCC
Q 047974           50 LHDKVAQILEKTKGSFMIKGSWVAQYDMFLTSDPANVQHIMSTNFSKYHKGSEGRK---------RFDIFGETGLFNSDF  120 (497)
Q Consensus        50 ~~~~~~~~~~k~g~v~~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~~~~~~~~~---------~~~~~g~~~l~~~~~  120 (497)
                      ++.++..+ ++||||++ .     |.+.++|+||+.+++++.+  ..|.+++....         ...+.|. ++++.+|
T Consensus        15 p~~~~~~l-~~yGpv~~-~-----g~~~~vv~~~~~v~~vl~~--~~f~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~g   84 (397)
T 3buj_A           15 PYPSYHWL-LRHDPVHR-G-----AHRVWYVSRFADVRAVLGD--ERFARTGIRRFWTDLVGPGLLAEIVGD-IILFQDE   84 (397)
T ss_dssp             CHHHHHHH-HHHCSEEE-C-----GGGCEEECSHHHHHHHHTC--TTEESHHHHHHHHHHHCSSHHHHHHTT-CGGGCCT
T ss_pred             chHHHHHH-HhcCCeee-C-----CCCeEEEcCHHHHHHHHcC--CCcccCccccccccccccccccccccc-ccccCCc
Confidence            56677766 68999985 3     3589999999999999986  35666533211         1122255 8888999


Q ss_pred             chHHHHHHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHH-HHHHHHHHHHHhhcCCCCCCCCCCC
Q 047974          121 DEWKHQRKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDL-LKRTTFDFACLIATGHNPNSLSVGF  199 (497)
Q Consensus       121 ~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~-~~~~~~~v~~~~~fG~~~~~~~~~~  199 (497)
                      +.|+++|++++++|+++.++.+. +.+.+. .+.+.+.+..    ++.+|+... ...+++++++.+ ||.+.+..    
T Consensus        85 ~~h~~~R~~~~~~fs~~~l~~~~-~~i~~~-~~~l~~~l~~----~~~~dl~~~~~~~~~~~vi~~~-~G~~~~~~----  153 (397)
T 3buj_A           85 PDHGRLRGVVGPAFSPSALRRLE-PVIAGT-VDDLLRPALA----RGAMDVVDELAYPLALRAVLGL-LGLPAADW----  153 (397)
T ss_dssp             THHHHHHHHHGGGSSTTTTGGGH-HHHHHH-HHHHHHHHHT----TTEEEHHHHTHHHHHHHHHHHH-HTCCGGGH----
T ss_pred             hhHHHHHHHHHHhcCHHHHHHHH-HHHHHH-HHHHHHHHhh----cCCeehHHHHHHHhHHHHHHHH-hCCCHHHH----
Confidence            99999999999999999888764 445555 4445555542    357998755 578999999998 99865321    


Q ss_pred             CCCChHHHHHHHHHHHHH---HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccccccccchhhHHHHHhcCCCCCCCCC
Q 047974          200 PEMGFPDAVDDACEAILI---RHLEKKLANGWRTIDQFWEKQKSMKQEEIEKGMEAKEDEGIYSLLNCYLSGHEVTGPTP  276 (497)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~l  276 (497)
                        ..+.+....+......   ....++..++.+.+.+++.+.|+++++.           ..+|+++.+++..+ ++. +
T Consensus       154 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~-----------~~~dll~~ll~~~~-~~~-l  218 (397)
T 3buj_A          154 --GAVGRWSRDVGRTLDRGASAEDMRRGHAAIAEFADYVERALARRRRE-----------GGEDLLALMLDAHD-RGL-M  218 (397)
T ss_dssp             --HHHHHHHHHHHGGGCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------CCCSHHHHHHHHHH-TTS-S
T ss_pred             --HHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHcC-----------CCCCHHHHHHHhhh-cCC-C
Confidence              1233332222211000   0113455677788888999998887653           23689999987643 234 8


Q ss_pred             chHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhhcccCCCCCCCCCChhhhhcchhHHHHHHHhhc
Q 047974          277 AEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRNFSQEGFNKPPLVRLNELNKLVYLHAALCETLR  356 (497)
Q Consensus       277 ~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lR  356 (497)
                      +++++.+++..+++||+|||+++++|++++|++||++|+++++|++                       |++|||+|+||
T Consensus       219 s~~ei~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~-----------------------~l~a~i~E~lR  275 (397)
T 3buj_A          219 SRNEIVSTVVTFIFTGHETVASQVGNAVLSLLAHPDQLDLLRRRPD-----------------------LLAQAVEECLR  275 (397)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHCGG-----------------------GHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHhCHHHHHHHhhCHH-----------------------HHHHHHHHHHh
Confidence            9999999999999999999999999999999999999999999853                       89999999999


Q ss_pred             CCCCCCcccccccCCCcccCCeeeCCCcEEEEeccccccCCCCCCCCCCCCCCCCccCCCCCccCCCCCcccccCCCCCC
Q 047974          357 LYPPVPFEIRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWGEDCREFKPERWITEDGRIRHEPPHKFFSFNAGPRI  436 (497)
Q Consensus       357 l~p~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~  436 (497)
                      ++|+++...|.+.+|.++ +||.|||||.|+++.+++||||++| +||++|+||||.           ..++|||+|+|.
T Consensus       276 l~p~~~~~~R~~~~d~~~-~g~~Ip~Gt~V~~~~~~~~rdp~~~-~dp~~F~PeR~~-----------~~~~~FG~G~r~  342 (397)
T 3buj_A          276 YDPSVQSNTRQLDVDVEL-RGRRLRRDDVVVVLAGAANRDPRRY-DRPDDFDIERDP-----------VPSMSFGAGMRY  342 (397)
T ss_dssp             HSCSCCEEEEEESSCEEE-TTEEECTTCEEEEEHHHHTTCTTTC-SSTTSCCTTSCC-----------CCCSTTCCGGGC
T ss_pred             hcCcccCcceEECCCEEE-CCEEECCCCEEEEChhhhCCCcccc-CCccccCCCCCC-----------CCCCCCCCCCcc
Confidence            999999777888877666 9999999999999999999999999 999999999994           247999999999


Q ss_pred             CcchHHHHHHHHHHHHHHHhhc-eEEeecC-ccceeeeeEEEeecCceEEEEEec
Q 047974          437 CIGKDIAFTLMKATAASIIHNY-DVQVVKN-HPVTYNLSIGFRMKHGLLARVSKR  489 (497)
Q Consensus       437 C~G~~~A~~~~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~r  489 (497)
                      |+|++||++|++++++.| ++| ++++.++ .+.....+.+.+++.+++|+++||
T Consensus       343 C~G~~lA~~e~~~~l~~l-~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~r  396 (397)
T 3buj_A          343 CLGSYLARTQLRAAVAAL-ARLPGLRLGCASDALAYQPRTMFRGLASLPIAFTPG  396 (397)
T ss_dssp             CTTHHHHHHHHHHHHHHH-HTSTTCEESSCSTTCCBCSCSSCCCBSCCEEECCTT
T ss_pred             CCCHHHHHHHHHHHHHHH-hcCCCceeCCCCcccccccccccCCCcceeEEecCC
Confidence            999999999999999999 999 8999875 333444456677888999999886


No 56 
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A*
Probab=100.00  E-value=7.9e-58  Score=435.61  Aligned_cols=361  Identities=12%  Similarity=0.100  Sum_probs=285.0

Q ss_pred             HHHHHHHHHHHhCCeeEEeeecc-cCcceEEEcChhhHHHhhhcCCccccCCccccc-ccc-ccCCcC--eeecCC----
Q 047974           50 LHDKVAQILEKTKGSFMIKGSWV-AQYDMFLTSDPANVQHIMSTNFSKYHKGSEGRK-RFD-IFGETG--LFNSDF----  120 (497)
Q Consensus        50 ~~~~~~~~~~k~g~v~~~~~~~~-~~~~~v~v~~p~~v~~il~~~~~~~~~~~~~~~-~~~-~~g~~~--l~~~~~----  120 (497)
                      ++.++.++ ++||||+++   ++ ++.+.++|+||+.+++|+.++  .|.+++.+.. ... ..+. +  +++.+|    
T Consensus        28 p~~~~~~l-~~yGpv~~~---~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~-~~~l~~~~g~~~~  100 (404)
T 2xbk_A           28 LSPLLRAL-QDRGPIHRV---RTPAGDEAWLVTRHAELKQLLHDE--RIGRTHPDPPSAAQYVRSP-FLDLLISDADAES  100 (404)
T ss_dssp             CCHHHHHH-HHHCSEEEE---ECTTSCEEEEECSHHHHHHHTTCT--TEESBCSSGGGSCCSSCCH-HHHTTCBCSCHHH
T ss_pred             ccHHHHHH-HhhCCEeee---ccCCCceEEEEcCHHHHHHHHcCC--CCCCCccccccCCcccccc-cccceeeCCCCCC
Confidence            56678888 899999999   76 789999999999999999874  4766654432 112 2344 5  788899    


Q ss_pred             --chHHHHHHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHH-HHHHHHHHHHhhcCCCCCCCCC
Q 047974          121 --DEWKHQRKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLL-KRTTFDFACLIATGHNPNSLSV  197 (497)
Q Consensus       121 --~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~v~~~~~fG~~~~~~~~  197 (497)
                        +.|+++|+++.++|+++.++.+. +.+++. .+.+.+.+..   .++++|+...+ ..+++++++. +||.+.+.   
T Consensus       101 ~~~~h~~~R~~~~~~fs~~~l~~~~-~~i~~~-~~~ll~~l~~---~g~~~d~~~~~~~~~~~~vi~~-~~G~~~~~---  171 (404)
T 2xbk_A          101 GRRQHAETRRLLTPLFSARRVLEMQ-PKVEEA-ADTLLDAFIA---QGPPGDLHGELTVPFALTVLCE-VIGVPPQR---  171 (404)
T ss_dssp             HHHHHHHHHHHHGGGGCHHHHHHHH-HHHHHH-HHHHHHHHHH---TCSSEEHHHHTHHHHHHHHHHH-HHTCCGGG---
T ss_pred             CCchHHHHHHHhhhhcCHHHHHHHH-HHHHHH-HHHHHHHHHh---cCCCeeHHHHHHHHHHHHHHHH-HhCCCHHH---
Confidence              99999999999999999998875 445555 4555555542   34579998766 5689999997 78986431   


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccccccccchhhHHHHHhcCCCCCCCCCc
Q 047974          198 GFPEMGFPDAVDDACEAILIRHLEKKLANGWRTIDQFWEKQKSMKQEEIEKGMEAKEDEGIYSLLNCYLSGHEVTGPTPA  277 (497)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~l~  277 (497)
                         ...+.+.+..+.....    ..+..++.+.+.+++.+.|+++++.           ..+|+++.+ +    ++ .++
T Consensus       172 ---~~~~~~~~~~~~~~~~----~p~~~~~~~~~~~~~~~~i~~r~~~-----------~~~dll~~l-~----~~-~ls  227 (404)
T 2xbk_A          172 ---RAELTTLLAGIAKLDD----REGAVRAQDDLFGYVAGLVEHKRAE-----------PGPDIISRL-N----DG-ELT  227 (404)
T ss_dssp             ---HHHHHHHHHHHTBSSC----HHHHHHHHHHHHHHHHHHHHHHHHS-----------CCSSHHHHH-H----SS-SCC
T ss_pred             ---HHHHHHHHHHHHhccC----cHHHHHHHHHHHHHHHHHHHHHHhC-----------CCCCHHHHh-h----cC-CCC
Confidence               1122222222211000    0145567778888888888877642           235888888 2    23 689


Q ss_pred             hHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhhcccCCCCCCCCCChhhhhcchhHHHHHHHhhcC
Q 047974          278 EKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRNFSQEGFNKPPLVRLNELNKLVYLHAALCETLRL  357 (497)
Q Consensus       278 ~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl  357 (497)
                      ++++..++..+++||+|||+.+++|++++|++||++|+++++|++                       |++|||+|+||+
T Consensus       228 ~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~-----------------------~l~a~i~E~lRl  284 (404)
T 2xbk_A          228 EDRVAHLAMGLLFAGLDSVASIMDNGVVLLAAHPDQRAAALADPD-----------------------VMARAVEEVLRT  284 (404)
T ss_dssp             HHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHCHHHHHHHHHCHH-----------------------HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHhCHH-----------------------HHHHHHHHHHHh
Confidence            999999999999999999999999999999999999999999865                       789999999999


Q ss_pred             CCCCC--cccccccCCCcccCCeeeCCCcEEEEeccccccCCCCCCCCCCCCCCCCccCCCCCccCCCCCcccccCCCCC
Q 047974          358 YPPVP--FEIRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWGEDCREFKPERWITEDGRIRHEPPHKFFSFNAGPR  435 (497)
Q Consensus       358 ~p~~~--~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r  435 (497)
                      +|+++  ...|.+.+|.++ +||.|||||.|+++.+++||||++| +||++|+||||.           ..++|||+|+|
T Consensus       285 ~p~~~~~~~~R~~~~d~~l-~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~-----------~~~lpFG~G~r  351 (404)
T 2xbk_A          285 ARAGGSVLPPRYASEDMEF-GGVTIRAGDLVLFDLGLPNFDERAF-TGPEEFDAARTP-----------NPHLTFGHGIW  351 (404)
T ss_dssp             SCSSCCBCSCEEESSCEEE-TTEEECTTCEEECBTHHHHTCTTTS-SSTTSCCTTCSS-----------CCCCTTEETTE
T ss_pred             CCCccccccceeECCCeeE-CCEEECCCCEEEeChHHhcCChhhC-CCccccCCCCCC-----------CCCCCCCCCCc
Confidence            99999  677888877666 9999999999999999999999999 999999999983           35899999999


Q ss_pred             CCcchHHHHHHHHHHHHHHHhhc-eEEeecC-ccceeeeeEEEeecCceEEEE
Q 047974          436 ICIGKDIAFTLMKATAASIIHNY-DVQVVKN-HPVTYNLSIGFRMKHGLLARV  486 (497)
Q Consensus       436 ~C~G~~~A~~~~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  486 (497)
                      .|+|++||++|++++++.|+++| ++++.++ .+.....+.+++....++|++
T Consensus       352 ~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~  404 (404)
T 2xbk_A          352 HCIGAPLARLELRTMFTKLFTRLPELRPELPVEQLRLKEGQLSGGFAELRVVW  404 (404)
T ss_dssp             ECTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCBCSSBTTCCBSCCEEEC
T ss_pred             CCCcHHHHHHHHHHHHHHHHHhCCcceecCCCCcceeccCcccCCcceeeeeC
Confidence            99999999999999999999999 7999764 233344455566677788763


No 57 
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A*
Probab=100.00  E-value=1.8e-57  Score=437.77  Aligned_cols=373  Identities=13%  Similarity=0.079  Sum_probs=293.4

Q ss_pred             hHHHHHHHHHHHhCCeeEEeeeccc-------CcceEEEcChhhHHHhhhcCCccccCCccc--cccc-cc--cCCcCee
Q 047974           49 QLHDKVAQILEKTKGSFMIKGSWVA-------QYDMFLTSDPANVQHIMSTNFSKYHKGSEG--RKRF-DI--FGETGLF  116 (497)
Q Consensus        49 ~~~~~~~~~~~k~g~v~~~~~~~~~-------~~~~v~v~~p~~v~~il~~~~~~~~~~~~~--~~~~-~~--~g~~~l~  116 (497)
                      +++.++.+++ +|||||++   +++       +.+.++|+||+.+++++.++ ..|++++..  .... .+  .|. +++
T Consensus        45 ~p~~~~~~l~-~~Gpv~~~---~~~~~~~~~~g~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~-~l~  118 (435)
T 2wm5_A           45 VRDGAFATLR-REAPISFW---PTIELPGFVAGNGHWALTKYDDVFYASRHP-DIFSSYPNITINDQTPELAEYFG-SMI  118 (435)
T ss_dssp             HHHHHHHHHH-HHCSEEEE---CCCCC---CCCCCEEEECSHHHHHHHHHCT-TTEECSSCCSSSCCCHHHHHHHH-GGG
T ss_pred             ChhHHHHHHH-hcCCeEec---ccccccccCCCCCeEEEcCHHHHHHHHcCc-ccccCccccccCccccchhhhcc-ccc
Confidence            4778888885 79999998   775       67899999999999999986 568777532  1111 11  244 788


Q ss_pred             ecCCchHHHHHHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHH-HHHHHHHHHHhhcCCCCCCC
Q 047974          117 NSDFDEWKHQRKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLL-KRTTFDFACLIATGHNPNSL  195 (497)
Q Consensus       117 ~~~~~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~v~~~~~fG~~~~~~  195 (497)
                      ..+|+.|+++|+++.++|+++.++.+. +.+.+. .+.+.+.+.+. +++..+|+.+.+ ..+++++++.+ ||.+.+. 
T Consensus       119 ~~dg~~h~~~R~~l~~~fs~~~l~~~~-~~i~~~-~~~ll~~l~~~-~~~~~vd~~~~~~~~~~~~vi~~~-~G~~~~~-  193 (435)
T 2wm5_A          119 VLDDPRHQRLRSIVSRAFTPKVVARIE-AAVRDR-AHRLVSSMIAN-NPDRQADLVSELAGPLPLQIICDM-MGIPKAD-  193 (435)
T ss_dssp             GCCTTHHHHHHHHHHHTCCHHHHHHHH-HHHHHH-HHHHHHHHHHH-CTTSEEEHHHHTTTHHHHHHHHHH-HTCCGGG-
T ss_pred             cCCcHHHHHHHHHhHHhhCHHHHHHHH-HHHHHH-HHHHHHHHHhc-CCCCcEehHHHHHHHHHHHHHHHH-cCCCHHH-
Confidence            889999999999999999999998875 445555 45555555542 224589999866 78999999998 9987542 


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHH--HHHHHHhHHHHHHHHHHHHHHHHHHHHHhccccccccchhhHHHHHhcCCCCCC
Q 047974          196 SVGFPEMGFPDAVDDACEAILIRH--LEKKLANGWRTIDQFWEKQKSMKQEEIEKGMEAKEDEGIYSLLNCYLSGHEVTG  273 (497)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~  273 (497)
                           ...+.+....+.......+  ..++..++.+.+.+++.+.|+++++           ...+|+++.+++... ++
T Consensus       194 -----~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~i~~r~~-----------~~~~dll~~ll~~~~-~~  256 (435)
T 2wm5_A          194 -----HQRIFHWTNVILGFGDPDLATDFDEFMQVSADIGAYATALAEDRRV-----------NHHDDLTSSLVEAEV-DG  256 (435)
T ss_dssp             -----HHHHHHHHHHHHHTTCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHH-----------SCCSSHHHHHHHCCB-TT
T ss_pred             -----HHHHHHHHHHHhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHhc-----------CCCCCHHHHHHhhhc-cC
Confidence                 1123333333222100000  1245667788888999999888765           124689999998754 24


Q ss_pred             CCCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhhcccCCCCCCCCCChhhhhcchhHHHHHHH
Q 047974          274 PTPAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRNFSQEGFNKPPLVRLNELNKLVYLHAALCE  353 (497)
Q Consensus       274 ~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E  353 (497)
                      ..++++++..++..+++||+|||+.+++|++++|++||++|+++++|++.                      |++|||+|
T Consensus       257 ~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~~----------------------~l~a~i~E  314 (435)
T 2wm5_A          257 ERLSSREIASFFILLVVAGNETTRNAITHGVLALSRYPEQRDRWWSDFDG----------------------LAPTAVEE  314 (435)
T ss_dssp             BCCCHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHCHHHHHHHHHSHHH----------------------HHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCHHHHHHHhChHh----------------------HHHHHHHH
Confidence            56899999999999999999999999999999999999999999999762                      78999999


Q ss_pred             hhcCCCCCCcccccccCCCcccCCeeeCCCcEEEEeccccccCCCCCCCCCCCCCCCCccCCCCCccCCCCCcccccCC-
Q 047974          354 TLRLYPPVPFEIRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWGEDCREFKPERWITEDGRIRHEPPHKFFSFNA-  432 (497)
Q Consensus       354 ~lRl~p~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~-  432 (497)
                      +||++|+++...|.+.+|.++ +||.|||||.|+++.+++||||++| +||++|+|||+           +..++|||+ 
T Consensus       315 ~lRl~p~~~~~~R~~~~d~~l-~G~~Ip~Gt~V~~~~~~~~rdp~~f-~dP~~F~PeR~-----------~~~~lpFG~~  381 (435)
T 2wm5_A          315 IVRWASPVVYMRRTLTQDIEL-RGTKMAAGDKVSLWYCSANRDESKF-ADPWTFDLARN-----------PNPHLGFGGG  381 (435)
T ss_dssp             HHHHHCSBCCEEEEESSCEEE-TTEEECTTCEEEECHHHHTTCTTTS-SSTTCCCTTCC-----------SCCCCTTCSS
T ss_pred             HHhhcCcccCcceEeCCCeeE-CCEEECCCCEEEeCHHHhcCCcccC-cCCCccCCCCC-----------CCCCCCCCCC
Confidence            999999999777888887666 9999999999999999999999999 99999999993           135899999 


Q ss_pred             CCCCCcchHHHHHHHHHHHHHHHhhce-EEeecCccceeeeeEEEeecCceEEEE
Q 047974          433 GPRICIGKDIAFTLMKATAASIIHNYD-VQVVKNHPVTYNLSIGFRMKHGLLARV  486 (497)
Q Consensus       433 G~r~C~G~~~A~~~~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  486 (497)
                      |+|.|+|++||++|++++++.|+++|+ +++.++.  ........+....++|++
T Consensus       382 G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~--~~~~~~~~~~~~~lpv~~  434 (435)
T 2wm5_A          382 GAHFCLGANLARREIRVAFDELRRQMPDVVATEEP--ARLLSQFIHGIKTLPVTW  434 (435)
T ss_dssp             STTCCTTHHHHHHHHHHHHHHHHHHCTTCEECSCC--EECCCSSBCCEEECEEEC
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHhCCccEECCCc--cccccccccCccceeEEe
Confidence            999999999999999999999999997 9997632  233334445556677765


No 58 
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} SCOP: a.104.1.0 PDB: 3lxi_A*
Probab=100.00  E-value=5.4e-58  Score=440.84  Aligned_cols=374  Identities=11%  Similarity=0.095  Sum_probs=291.0

Q ss_pred             hHHHHHHHHHHHhC-CeeEEeeecccCcceEEEcChhhHHHhhhcCCccccCCccccccc--cccCCcCeeecCCchHHH
Q 047974           49 QLHDKVAQILEKTK-GSFMIKGSWVAQYDMFLTSDPANVQHIMSTNFSKYHKGSEGRKRF--DIFGETGLFNSDFDEWKH  125 (497)
Q Consensus        49 ~~~~~~~~~~~k~g-~v~~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~~~~~~~~~~~--~~~g~~~l~~~~~~~w~~  125 (497)
                      +++.++.++++++| ||+++   ..++ +.++|+||+.+++|+++. ..|.+++......  ...+. +++..+|+.|++
T Consensus        39 dp~~~~~~lr~~~G~pv~~~---~~~~-~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~-~~~~~dg~~h~~  112 (421)
T 3lxh_A           39 GFHEAWKRVQQPDTPPLVWT---PFTG-GHWIATRGTLIDEIYRSP-ERFSSRVIWVPREAGEAYDM-VPTKLDPPEHTP  112 (421)
T ss_dssp             CHHHHHHHHCCTTCCSEEEE---SSTT-SEEEECSHHHHHHHHTCT-TTEETTCCSSSHHHHHHCCC-TTTTCCTTTHHH
T ss_pred             ChhHHHHHHHhcCCCCeEec---cCCC-CeEEEcCHHHHHHHHcCh-hhccCCcccCCccccccccc-CCccCCcHHHHH
Confidence            47888888876655 79988   6665 599999999999999654 6787766332111  22234 778899999999


Q ss_pred             HHHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHH-HHHHHHHHHHhhcCCCCCCCCCCCCCCCh
Q 047974          126 QRKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLL-KRTTFDFACLIATGHNPNSLSVGFPEMGF  204 (497)
Q Consensus       126 ~R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~v~~~~~fG~~~~~~~~~~~~~~~  204 (497)
                      +|++++++|+++.++.+.+ .+.+. .+.+.+.+..    ++.+|+...+ ..++.++++. +||.+.+.      ...+
T Consensus       113 ~R~~~~~~fs~~~l~~~~~-~i~~~-~~~l~~~l~~----~~~~d~~~~~~~~~~~~v~~~-~~G~~~~~------~~~~  179 (421)
T 3lxh_A          113 YRKAIDKGLNLAEIRKLED-QIRTI-AVEIIEGFAD----RGHCEFGSEFSTVFPVRVFLA-LAGLPVED------ATKL  179 (421)
T ss_dssp             HHHHHHHHHSHHHHHTTHH-HHHHH-HHHHHHTTTT----TSEEEHHHHTTTTHHHHHHHH-HHTCCGGG------HHHH
T ss_pred             HHHHHhhhcCHHHHHHHHH-HHHHH-HHHHHHHHhh----cCCeehHHHHHHHHHHHHHHH-HcCCCHHH------HHHH
Confidence            9999999999999988653 45554 3444444432    3478986666 5577777776 57875431      1123


Q ss_pred             HHHHHHHHHHHH--HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccccccccchhhHHHHHhcCCCCCCCCCchHHHH
Q 047974          205 PDAVDDACEAIL--IRHLEKKLANGWRTIDQFWEKQKSMKQEEIEKGMEAKEDEGIYSLLNCYLSGHEVTGPTPAEKVMR  282 (497)
Q Consensus       205 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~l~~~~i~  282 (497)
                      .+....+.....  .....+...++.+.+.+++.+.++++++.           ..+|+++.+++... ++..++++++.
T Consensus       180 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~r~~~-----------~~~dll~~ll~~~~-~~~~l~~~ei~  247 (421)
T 3lxh_A          180 GLLANEMTRPSGNTPEEQGRSLEAANKGFFEYVAPIIAARRGG-----------SGTDLITRILNVEI-DGKPMPDDRAL  247 (421)
T ss_dssp             HHHHHHHHSCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-----------CCCSHHHHHHTSCB-TTBCCCHHHHH
T ss_pred             HHHHHHHhccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhC-----------CCCCHHHHHHhhhc-cCCCCCHHHHH
Confidence            333322221100  00114566778888888998888877642           35789999998755 34569999999


Q ss_pred             HHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhhcccCCCCCCCCCChhhhhcchhHHHHHHHhhcCCCCCC
Q 047974          283 DNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRNFSQEGFNKPPLVRLNELNKLVYLHAALCETLRLYPPVP  362 (497)
Q Consensus       283 ~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~  362 (497)
                      .+++.+++||+|||+.+++|++++|++||++|+++++|++                       |++|||+|+||++|++ 
T Consensus       248 ~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~-----------------------~l~a~i~E~lRl~p~~-  303 (421)
T 3lxh_A          248 GLVSLLLLGGLDTVVNFLGFMMIYLSRHPETVAEMRREPL-----------------------KLQRGVEELFRRFAVV-  303 (421)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHCHH-----------------------HHHHHHHHHHHHCCCB-
T ss_pred             HHHHHHHHHhHHHHHHHHHHHHHHHHhCHHHHHHHHhCHH-----------------------HHHHHHHHHHHhcCcc-
Confidence            9999999999999999999999999999999999999987                       7889999999999999 


Q ss_pred             cccccccCCCcccCCeeeCCCcEEEEeccccccCCCCCCCCCCCCCCCCccCCCCCccCCCCCcccccCCCCCCCcchHH
Q 047974          363 FEIRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWGEDCREFKPERWITEDGRIRHEPPHKFFSFNAGPRICIGKDI  442 (497)
Q Consensus       363 ~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~  442 (497)
                      ...|.+.+|.++ +||.||||+.|+++.+++||||++| +||++|+||||           +..|+|||+|+|.|+|++|
T Consensus       304 ~~~R~~~~d~~l-~G~~Ip~G~~V~~~~~~~~rdp~~~-~dP~~F~PeR~-----------~~~~l~FG~G~r~C~G~~l  370 (421)
T 3lxh_A          304 SDARYVVSDMEF-HGTMLKEGDLILLPTALHGLDDRHH-DDPMTVDLSRR-----------DVTHSTFAQGPHRCAGMHL  370 (421)
T ss_dssp             EEEEEECSCEEE-TTEEECTTCEEEEETHHHHTCTTTS-SSTTSCCTTCS-----------CCCCCTTCCGGGSCTTHHH
T ss_pred             CCceeeCCCeeE-CCEEECCCCEEEEchhhhCCChhhC-CCcCeeCCCCC-----------CCCCCCCCCcCccCcCHHH
Confidence            888888887676 9999999999999999999999999 99999999994           3579999999999999999


Q ss_pred             HHHHHHHHHHHHHhhc-eEEeecCccceeeeeEEEeecCceEEEEEecCC
Q 047974          443 AFTLMKATAASIIHNY-DVQVVKNHPVTYNLSIGFRMKHGLLARVSKRSA  491 (497)
Q Consensus       443 A~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  491 (497)
                      |++|++++++.|+++| ++++.++.+....... .+....++|+++||..
T Consensus       371 A~~e~~~~l~~ll~~fp~~~l~~~~~~~~~~~~-~~~~~~lpv~~~p~~~  419 (421)
T 3lxh_A          371 ARLEVTVMLQEWLARIPEFRLKDRAVPIYHSGI-VAAVENIPLEWEPQRV  419 (421)
T ss_dssp             HHHHHHHHHHHHHHHCCCCEECTTCCCEEECSS-BCEEECCEEECCCC--
T ss_pred             HHHHHHHHHHHHHHhCCCcEECCCCCceecccc-ccCceeeeEEEecccc
Confidence            9999999999999999 9999876655444443 3444579999999864


No 59 
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans}
Probab=100.00  E-value=1.6e-57  Score=440.42  Aligned_cols=373  Identities=13%  Similarity=0.152  Sum_probs=291.0

Q ss_pred             chHHHHHHHHHHHhCCee--EEeeec-ccCcceEEEcChhhHHHhhhcCCccccCCccccccc---------------cc
Q 047974           48 NQLHDKVAQILEKTKGSF--MIKGSW-VAQYDMFLTSDPANVQHIMSTNFSKYHKGSEGRKRF---------------DI  109 (497)
Q Consensus        48 ~~~~~~~~~~~~k~g~v~--~~~~~~-~~~~~~v~v~~p~~v~~il~~~~~~~~~~~~~~~~~---------------~~  109 (497)
                      ++++.++.++ ++||||+  ++   + +++.+.++|+++++|+++++++ ..|++++......               ..
T Consensus        45 ~~p~~~~~~l-r~~gPV~~~~~---~~~g~~~~~vvt~~~~v~~vl~~~-~~fs~~~~~~~~~~~~~~~~~~~~~gg~~~  119 (450)
T 3tkt_A           45 EPLLDRFDAL-RAEAPVAKVVA---PDDEHEPFWLVSSFDGVMKASKDN-ATFLNNPKSTVFTLRVGEMMAKAITGGSPH  119 (450)
T ss_dssp             HHHHHHHHHH-HHHCSEEEECC---TTCSSCCEEEECSHHHHHHHHHCT-TTEESSSSCSSCCCHHHHHHHHHHHTSCSC
T ss_pred             CCchHHHHHH-HhcCCeecccc---cCCCCCCEEEEecHHHHHHHHhCc-ccccCCCccccccccccccccccccccccc
Confidence            3478888888 6899999  88   6 6788999999999999999876 6777765432211               11


Q ss_pred             cCCcCeeecCCchHHHHHHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHH-HHHHHHHHHHhhc
Q 047974          110 FGETGLFNSDFDEWKHQRKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLL-KRTTFDFACLIAT  188 (497)
Q Consensus       110 ~g~~~l~~~~~~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~v~~~~~f  188 (497)
                      .+. +++..+|+.|+++|++++++|++++++.+. +.+++. .+.+++.+.+   .++.+|+...+ ..+++++++.+ |
T Consensus       120 ~~~-~l~~~dg~~h~~~R~~~~~~fs~~~l~~~~-~~i~~~-~~~ll~~l~~---~~~~~dl~~~~~~~~~~~vi~~l-~  192 (450)
T 3tkt_A          120 LVE-SLVQMDAPKHPKLRRLTQDWFMPKNLARLD-GEIRKI-ANEAIDRMLG---AGEEGDFMALVAAPYPLHVVMQI-L  192 (450)
T ss_dssp             SSC-CGGGCCTTHHHHHHHHHHTTTSHHHHGGGH-HHHHHH-HHHHHHHHHH---TCSEEEHHHHTTTHHHHHHHHHH-T
T ss_pred             ccc-CcccCCCHHHHHHHHHhhhhhCHHHHHHHH-HHHHHH-HHHHHHHHHh---cCCCEeeHHHHHHHHHHHHHHHH-c
Confidence            334 788899999999999999999999998864 445555 4555555543   25789998888 68999999985 8


Q ss_pred             CCCCCCCCCCCCCCChHHHHHHHHH---H---HHH------HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhcccccccc
Q 047974          189 GHNPNSLSVGFPEMGFPDAVDDACE---A---ILI------RHLEKKLANGWRTIDQFWEKQKSMKQEEIEKGMEAKEDE  256 (497)
Q Consensus       189 G~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~------~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  256 (497)
                      |.+...      ...+.+....+..   .   ...      ....+...++.+.+.+++.+.++++++           .
T Consensus       193 G~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~-----------~  255 (450)
T 3tkt_A          193 GVPPED------EPKMLFLTQQMFGGQDEDMNKSGLKDLPPEQISQIVAGAVAEFERYFAGLAAERRR-----------N  255 (450)
T ss_dssp             TCCGGG------HHHHHHHHHTTSCCC----------------HHHHHHHHHHHHHHHHHHHHHHHHH-----------S
T ss_pred             CCChhH------HHHHHHHHHHHhccccchhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHh-----------C
Confidence            975421      1112222111110   0   000      011355667778888899998888765           2


Q ss_pred             chhhHHHHHhcCCCCCCCCCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhhcccCCCCCCCCC
Q 047974          257 GIYSLLNCYLSGHEVTGPTPAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRNFSQEGFNKPPLV  336 (497)
Q Consensus       257 ~~~dll~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~  336 (497)
                      ..+|+++.|++... ++..++++++..+++.+++||+|||+++++|++++|++||++|+++++|++              
T Consensus       256 ~~~dll~~ll~~~~-~~~~ls~~ei~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~~l~~E~~--------------  320 (450)
T 3tkt_A          256 PTDDVATVIANAVV-DGEPMSDRDTAGYYIITASAGHDTTSASSAGAALALARDPDLFARVKADRN--------------  320 (450)
T ss_dssp             CCSSHHHHHHTCEE-TTEECCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHCHHHHHHHHHCGG--------------
T ss_pred             CCCCHHHHHHhccc-cCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHCHH--------------
Confidence            34689999998754 345699999999999999999999999999999999999999999999864              


Q ss_pred             ChhhhhcchhHHHHHHHhhcCCCCCCcccccccCCCcccCCeeeCCCcEEEEeccccccCCCCCCCCCCCCCCCCccCCC
Q 047974          337 RLNELNKLVYLHAALCETLRLYPPVPFEIRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWGEDCREFKPERWITED  416 (497)
Q Consensus       337 ~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~  416 (497)
                               |+++||+|+||++|+++...|.+.+|.++ +||.||||+.|+++.+++||||++| +||++|+||||    
T Consensus       321 ---------~l~a~i~E~LRl~pp~~~~~R~~~~d~~l-~G~~Ip~G~~V~~~~~~~~rDp~~~-~dP~~F~PeR~----  385 (450)
T 3tkt_A          321 ---------LLPGIVEEAIRWTTPVQHFMRTAATDTEL-CGQKIAAGDWLMLNYVAANHDPAQF-PEPRKFDPTRP----  385 (450)
T ss_dssp             ---------GHHHHHHHHHHHHCSBCEEEEEESSSEEE-TTEEECTTCEEEEEHHHHHTCTTTS-SSTTSCCTTSC----
T ss_pred             ---------HHHHHHHHHHHhCCCccCcceeeCCCeeE-CCEEECCCCEEEEChHHhcCChhhC-CCcCeeCCCCC----
Confidence                     78999999999999999777888887666 9999999999999999999999999 99999999994    


Q ss_pred             CCccCCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhce-EEeecCccceeeeeEEEeecCceEEEEEe
Q 047974          417 GRIRHEPPHKFFSFNAGPRICIGKDIAFTLMKATAASIIHNYD-VQVVKNHPVTYNLSIGFRMKHGLLARVSK  488 (497)
Q Consensus       417 ~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  488 (497)
                             ...++|||+|+|.|+|++||++|++++++.|+++|+ +++.++.  ........+....++|++++
T Consensus       386 -------~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~--~~~~~~~~~g~~~lpv~~~~  449 (450)
T 3tkt_A          386 -------ANRHLAFGAGSHQCLGLHLARLEMRVLLDVLLDRVDSLELAGEP--KRVNSTFVGGFKSLPMRWKA  449 (450)
T ss_dssp             -------TTCSSTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEEEESSCC--EECCCSSBCCEEECEEEEEE
T ss_pred             -------CCCCCCCCCcCccCccHHHHHHHHHHHHHHHHHhCCCceeCCCc--ccccCcccCCcccceEEEec
Confidence                   235899999999999999999999999999999998 6765422  22233344555678898876


No 60 
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A*
Probab=100.00  E-value=2.3e-57  Score=433.61  Aligned_cols=367  Identities=13%  Similarity=0.074  Sum_probs=286.6

Q ss_pred             hHHHHHHHHHHHhCCeeEEeeecccCcceEEEcChhhHHHhhhcCCccccCCccccccc--cccCCcCeeecCCchHHHH
Q 047974           49 QLHDKVAQILEKTKGSFMIKGSWVAQYDMFLTSDPANVQHIMSTNFSKYHKGSEGRKRF--DIFGETGLFNSDFDEWKHQ  126 (497)
Q Consensus        49 ~~~~~~~~~~~k~g~v~~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~~~~~~~~~~~--~~~g~~~l~~~~~~~w~~~  126 (497)
                      +++.++.+++++ |||+++   ..++ +.++|+||+.+++++++. ..|.+++......  ...+. +++..+|+.|+++
T Consensus        25 ~p~~~~~~l~~~-Gpv~~~---~~~~-~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~-~~~~~~g~~h~~~   97 (396)
T 3oft_A           25 DYFAAWKTLLDG-PGLVWS---TANG-GHWIAARGDVVRELWGDA-ERLSSQCLAVTPGLGKVMQF-IPLQQDGAEHKAF   97 (396)
T ss_dssp             CHHHHHHGGGGS-CSEEEE---CSTT-SEEEECSHHHHHHHHHCT-TTEESTTCCSSTTHHHHHCC-TTTTCCHHHHHHH
T ss_pred             ChHHHHHHHHhc-CCeeee---cCCC-CEEEEcCHHHHHHHHcCc-ccccCCcccCCCcccccccc-CccccCCcHHHHH
Confidence            578899999888 999998   6664 589999999999999765 6787766332111  22233 6778899999999


Q ss_pred             HHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHH-HHHHHHHHHHhhcCCCCCCCCCCCCCCChH
Q 047974          127 RKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLL-KRTTFDFACLIATGHNPNSLSVGFPEMGFP  205 (497)
Q Consensus       127 R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~v~~~~~fG~~~~~~~~~~~~~~~~  205 (497)
                      ||++.++|+++.++.+. +.+.+. .+.+.+.+.+    ++.+|+...+ ..++.++++. +||.+...      ...+.
T Consensus        98 R~~~~~~f~~~~l~~~~-~~i~~~-~~~l~~~l~~----~~~~d~~~~~~~~~~~~v~~~-~~G~~~~~------~~~~~  164 (396)
T 3oft_A           98 RTPVMKGLASRFVVALE-PKVQAV-ARKLMESLRP----RGSCDFVSDFAEILPLNIFLT-LIDVPLED------RPRLR  164 (396)
T ss_dssp             HHHHHHHTCHHHHHHHH-HHHHHH-HHHHHHHHGG----GSEEEHHHHTTTTHHHHHHHH-HTTCCGGG------HHHHH
T ss_pred             HHHhhhhhCHHHHHHHH-HHHHHH-HHHHHHHhhh----cCCccHHHHHHHHHHHHHHHH-HcCCCHHH------HHHHH
Confidence            99999999999998875 445555 4555555543    2468887666 4566666665 67864321      11122


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccccccccchhhHHHHHhcCCCCCCCCCchHHHHHHH
Q 047974          206 DAVDDACEAILIRHLEKKLANGWRTIDQFWEKQKSMKQEEIEKGMEAKEDEGIYSLLNCYLSGHEVTGPTPAEKVMRDNI  285 (497)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~l~~~~i~~~~  285 (497)
                      +....+.    .........++.+.+.+++.+.|+++++.           ..+|+++.+++... ++..++++++..++
T Consensus       165 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~i~~r~~~-----------~~~d~l~~ll~~~~-~~~~l~~~el~~~~  228 (396)
T 3oft_A          165 QLGVQLT----RPDGSMTVEQLKQAADDYLWPFIEKRMAQ-----------PGDDLFSRILSEPV-GGRPWTVDEARRMC  228 (396)
T ss_dssp             HHHHHHH----SCCSSCCHHHHHHHHHHHHHHHHHHHHHS-----------CCSSHHHHHHTSCB-TTBCCCHHHHHHHH
T ss_pred             HHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHHHHhC-----------CCCCHHHHHHHhhc-cCCCCCHHHHHHHH
Confidence            2211111    00002345567788889999999888753           35799999998755 34569999999999


Q ss_pred             HHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhhcccCCCCCCCCCChhhhhcchhHHHHHHHhhcCCCCCCccc
Q 047974          286 TALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRNFSQEGFNKPPLVRLNELNKLVYLHAALCETLRLYPPVPFEI  365 (497)
Q Consensus       286 ~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~  365 (497)
                      +.+++||+|||+.+++|++++|++||++|+++++|++                       |++|||+|+||++|++ ...
T Consensus       229 ~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~-----------------------~l~a~i~E~lRl~p~~-~~~  284 (396)
T 3oft_A          229 RNLLFGGLDTVAAMIGMVALHLARHPEDQRLLRERPD-----------------------LIPAAADELMRRYPTV-AVS  284 (396)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG-----------------------GHHHHHHHHHHHCCCB-EEE
T ss_pred             HHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHH-----------------------hHHHHHHHHHHhcCcc-cCc
Confidence            9999999999999999999999999999999999865                       7899999999999999 778


Q ss_pred             ccccCCCcccCCeeeCCCcEEEEeccccccCCCCCCCCCCCCCCCCccCCCCCccCCCCCcccccCCCCCCCcchHHHHH
Q 047974          366 RIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWGEDCREFKPERWITEDGRIRHEPPHKFFSFNAGPRICIGKDIAFT  445 (497)
Q Consensus       366 r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~  445 (497)
                      |.+.+|.++ +||.|||||.|+++.+++||||++| +||++|+|+||+.         +..|+|||+|+|.|+|++||++
T Consensus       285 R~~~~d~~~-~g~~Ip~G~~V~~~~~~~~rdp~~~-~dp~~F~PeR~~~---------~~~~~~FG~G~r~C~G~~lA~~  353 (396)
T 3oft_A          285 RNAVADVDA-DGVTIRKGDLVYLPSVLHNLDPASF-EAPEEVRFDRGLA---------PIRHTTMGVGAHRCVGAGLARM  353 (396)
T ss_dssp             EEESSCEEE-TTEEECTTCEEEEETHHHHTCTTTS-SSTTSCCSCCCCC---------GGGSSTTCCGGGCCTTHHHHHH
T ss_pred             eecCCCEEE-CCEEECCCCEEEeChHHhCCCcccC-CCcCccCCCCCCC---------CCCcccCCCCCccCcCHHHHHH
Confidence            888887666 9999999999999999999999999 9999999999973         3579999999999999999999


Q ss_pred             HHHHHHHHHHhhc-eEEeecCccceeeeeEEEeecCceEEEEE
Q 047974          446 LMKATAASIIHNY-DVQVVKNHPVTYNLSIGFRMKHGLLARVS  487 (497)
Q Consensus       446 ~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  487 (497)
                      |++++++.|+++| ++++.++.+....... .+....++|++.
T Consensus       354 e~~~~l~~ll~~~~~~~l~~~~~~~~~~~~-~~~~~~lpv~~~  395 (396)
T 3oft_A          354 EVIVFLREWLGGMPEFALAPDKAVTMKGGN-VGACTALPLVWR  395 (396)
T ss_dssp             HHHHHHHHHHHHSCCEEECSSSCCEEECSS-BCEEEECEEEEC
T ss_pred             HHHHHHHHHHHhCCCceECCCCCceecccc-ccCcccceEEeC
Confidence            9999999999999 9999876554433332 333456777764


No 61 
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena}
Probab=100.00  E-value=1.2e-57  Score=436.38  Aligned_cols=369  Identities=12%  Similarity=0.116  Sum_probs=285.3

Q ss_pred             hHHHHHHHHHHHhCCeeEEeeecc-cCcceEEEcChhhHHHhhhcCCccccCCccccc------ccccc-----CCcC-e
Q 047974           49 QLHDKVAQILEKTKGSFMIKGSWV-AQYDMFLTSDPANVQHIMSTNFSKYHKGSEGRK------RFDIF-----GETG-L  115 (497)
Q Consensus        49 ~~~~~~~~~~~k~g~v~~~~~~~~-~~~~~v~v~~p~~v~~il~~~~~~~~~~~~~~~------~~~~~-----g~~~-l  115 (497)
                      +++.++.+++ +||||+++   ++ |+.++++++||+.+++++.++  .|.+++....      .....     |. + +
T Consensus        23 ~p~~~~~~l~-~~Gpv~~~---~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l   95 (413)
T 2z36_A           23 APPAAYERLR-ERAPINKV---RLTSGGQAWWVSGHEEARAVLADG--RFSSDKRKDGFPLFTLDAATLQQLRSQP-PLM   95 (413)
T ss_dssp             BCCHHHHHHH-HHCSEEEE---EETTSCEEEEECSHHHHHHHHHCT--TEECCTTSTTCCCSSCCHHHHHHHTTSC-CCG
T ss_pred             CchHHHHHHH-HcCCeeEe---ecCCCceEEEEecHHHHHHHHcCC--CcccCccccCcccccccccccccccccc-ccc
Confidence            3666778876 78999999   76 789999999999999999873  5766543211      11222     55 7 8


Q ss_pred             eecCCchHHHHHHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHHH-HHHHHHHHHhhcCCCCCC
Q 047974          116 FNSDFDEWKHQRKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLLK-RTTFDFACLIATGHNPNS  194 (497)
Q Consensus       116 ~~~~~~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~-~~~~~v~~~~~fG~~~~~  194 (497)
                      ++.+|+.|+++|+++.++|+++.++.+. +.+++. .+.+.+.+.+  ..++.+|+.+.+. .++.++++.+ ||.+.+.
T Consensus        96 ~~~~g~~h~~~R~~~~~~fs~~~l~~~~-~~i~~~-~~~ll~~l~~--~~~~~~d~~~~~~~~~~~~vi~~~-~G~~~~~  170 (413)
T 2z36_A           96 LGMDGAEHSAARRPVIGEFTVKRLAALR-PRIQDI-VDHFIDDMLA--TDQRPVDLVQALSLPVPSLVICEL-LGVPYTD  170 (413)
T ss_dssp             GGCCHHHHHHHHHHHHGGGSHHHHHHHH-HHHHHH-HHHHHHHHTT--CSCSSEEHHHHTTTHHHHHHHHHH-HTCCGGG
T ss_pred             cccCchHHHHHHHHHHHhhCHHHHHHHH-HHHHHH-HHHHHHHHHH--hcCCCccHHHHHhhhhHHHHHHHH-hCCCHHH
Confidence            8889999999999999999999998875 455555 4555555543  2256799987665 6899999984 8976431


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccccccccchhhHHHHHhcCCCCCCC
Q 047974          195 LSVGFPEMGFPDAVDDACEAILIRHLEKKLANGWRTIDQFWEKQKSMKQEEIEKGMEAKEDEGIYSLLNCYLSGHEVTGP  274 (497)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~  274 (497)
                      .      ..+.+....+....  .  .++..++.+.+.+++.+.++++++.           ..+|+++.+++..+ ++.
T Consensus       171 ~------~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~i~~r~~~-----------~~~dll~~ll~~~~-~~~  228 (413)
T 2z36_A          171 H------DFFQSRTTMMVSRT--S--MEDRRRAFAELRAYIDDLITRKESE-----------PGDDLFSRQIARQR-QEG  228 (413)
T ss_dssp             H------HHHHHHHHHTTCSS--C--HHHHHHHHHHHHHHHHHHHHHHHSS-----------CCSSHHHHHHHHHH-HHS
T ss_pred             H------HHHHHHHHHHhccc--C--cHHHHHHHHHHHHHHHHHHHHHHhC-----------CCCCHHHHHHHhhc-CCC
Confidence            0      11222111111000  0  1455667778888888888877541           23589999987632 234


Q ss_pred             CCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhhcccCCCCCCCCCChhhhhcchhHHHHHHHh
Q 047974          275 TPAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRNFSQEGFNKPPLVRLNELNKLVYLHAALCET  354 (497)
Q Consensus       275 ~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~  354 (497)
                      .++++++..++..+++||+|||+++++|++++|++||++|+++++|++                       |++|||+|+
T Consensus       229 ~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~-----------------------~l~a~i~E~  285 (413)
T 2z36_A          229 TLDHAGLVSLAFLLLTAGHETTANMISLGVVGLLSHPEQLTVVKANPG-----------------------RTPMAVEEL  285 (413)
T ss_dssp             CCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCGG-----------------------GHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHhCHHHHHHHHhChH-----------------------HHHHHHHHH
Confidence            589999999999999999999999999999999999999999999853                       789999999


Q ss_pred             hcCCCCCC-cccccccCCCcccCCeeeCCCcEEEEeccccccCCCCCCCCCCCCCCCCccCCCCCccCCCCCcccccCCC
Q 047974          355 LRLYPPVP-FEIRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWGEDCREFKPERWITEDGRIRHEPPHKFFSFNAG  433 (497)
Q Consensus       355 lRl~p~~~-~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G  433 (497)
                      ||++|+++ ...|.+.+|.++ +||.|||||.|+++.+++||||++| +||++|+||||.           ..++|||+|
T Consensus       286 lRl~p~~~~~~~R~~~~d~~~-~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~-----------~~~l~FG~G  352 (413)
T 2z36_A          286 LRYFTIADGVTSRLATEDVEI-GGVSIKAGEGVIVSMLSANWDPAVF-KDPAVLDVERGA-----------RHHLAFGFG  352 (413)
T ss_dssp             HHHHCTTTTCEEEEECSCEEE-TTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTCCC-----------CCCCTTCCS
T ss_pred             HHhCCCcccceeeeeCCCEEE-CCEEECCCCEEEEChHhhcCChhhC-CCccccCCCCCC-----------CCCCCCCCC
Confidence            99999999 667888777666 9999999999999999999999999 999999999983           248999999


Q ss_pred             CCCCcchHHHHHHHHHHHHHHHhhc-eEEeecC-ccceeeeeEEEeecCceEEEEE
Q 047974          434 PRICIGKDIAFTLMKATAASIIHNY-DVQVVKN-HPVTYNLSIGFRMKHGLLARVS  487 (497)
Q Consensus       434 ~r~C~G~~~A~~~~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  487 (497)
                      +|.|+|++||++|++++++.|+++| ++++.++ .++....+...+....++|++.
T Consensus       353 ~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~~~~~~~~~~~~~g~~~lpv~~~  408 (413)
T 2z36_A          353 PHQCLGQNLARMELQIVFDTLFRRIPSLRLAVPMEDVPFKGDSVIYGVHELPVTWH  408 (413)
T ss_dssp             TTSCTTHHHHHHHHHHHHHHHHHHSTTCEESSCGGGSCBCTTSSSCCBSCCEEECC
T ss_pred             CccCccHHHHHHHHHHHHHHHHHhCCCccccCCcccceecccccccCcceeeEEee
Confidence            9999999999999999999999999 5999765 3333333444455566777654


No 62 
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina}
Probab=100.00  E-value=2.2e-57  Score=434.15  Aligned_cols=368  Identities=14%  Similarity=0.135  Sum_probs=286.1

Q ss_pred             hHHHHHHHHHHHhCCeeEEeeecccC--cceEEEcChhhHHHhhhcCCccccCCccccccc---cc--c-CCcCeeecCC
Q 047974           49 QLHDKVAQILEKTKGSFMIKGSWVAQ--YDMFLTSDPANVQHIMSTNFSKYHKGSEGRKRF---DI--F-GETGLFNSDF  120 (497)
Q Consensus        49 ~~~~~~~~~~~k~g~v~~~~~~~~~~--~~~v~v~~p~~v~~il~~~~~~~~~~~~~~~~~---~~--~-g~~~l~~~~~  120 (497)
                      +++.++.++++ ||||+++   ...|  .+.++|++++.+++++++. ..|++++......   ..  . +. +++..+|
T Consensus        38 dp~~~~~~lr~-~gpV~~~---~~~g~~~~~~vv~~~~~v~~vl~~~-~~fs~~~~~~~~~~~~~~~~~~~~-~l~~~dg  111 (415)
T 3mgx_A           38 ERHARWRELAA-EDAMVWS---DPGSSPSGFWSVFSHRACAAVLAPS-APLTSEYGMMIGFDRDHPDNSGGR-MMVVSEH  111 (415)
T ss_dssp             THHHHHHHHHH-HTCCEEE---CSSSSSSCEEEECSHHHHHHHSCTT-SSEECTTCSSTTCCSSSCCTTTTT-SGGGCCH
T ss_pred             ChhHHHHHHHh-cCCEeec---cCCCCcCCEEEEecHHHHHHHHhCh-hhhcCCccccccccccccccccCC-CccccCc
Confidence            57888888865 9999988   4345  7999999999999999765 5677654332111   11  1 44 7888999


Q ss_pred             chHHHHHHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHH-HHHHHHHHHHhhcCCCCCCCCCCC
Q 047974          121 DEWKHQRKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLL-KRTTFDFACLIATGHNPNSLSVGF  199 (497)
Q Consensus       121 ~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~v~~~~~fG~~~~~~~~~~  199 (497)
                      +.|+++|++++++|+++.++.+. +.+++. .+.+++.+.   + ++.+|+...+ ..+++++++. +||.+..      
T Consensus       112 ~~h~~~R~~~~~~fs~~~l~~~~-~~i~~~-~~~ll~~l~---~-~~~~dl~~~~~~~~~~~vi~~-l~G~~~~------  178 (415)
T 3mgx_A          112 EQHRKLRKLVGPLLSRAAARKLA-ERVRIE-VGDVLGRVL---D-GEVCDAATAIGPRIPAAVVCE-ILGVPAE------  178 (415)
T ss_dssp             HHHHHHHHHHGGGSSHHHHHHSH-HHHHHH-HHHHTTTSS---S-SSCEESTTTTTTHHHHHHHHH-HHTCCGG------
T ss_pred             HHHHHHHHHhHhhhCHHHHHHHH-HHHHHH-HHHHHHHHH---h-cCCcchHHHHHHHHHHHHHHH-HcCCCHH------
Confidence            99999999999999999998865 345544 344444433   2 2478999887 6799999998 5786432      


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccccccccchhhHHHHHhcCCCCCCCCCchH
Q 047974          200 PEMGFPDAVDDACEAILIRHLEKKLANGWRTIDQFWEKQKSMKQEEIEKGMEAKEDEGIYSLLNCYLSGHEVTGPTPAEK  279 (497)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~l~~~  279 (497)
                      ....+.+....+.......+......++.+.+.+++.+.|+++++           ...+|+++.+++..     .++++
T Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~rr~-----------~~~~dll~~ll~~~-----~ls~~  242 (415)
T 3mgx_A          179 DEDMLIDLTNHAFGGEDELFDGMTPRQAHTEILVYFDELITARRK-----------EPGDDLVSTLVTDD-----DLTID  242 (415)
T ss_dssp             GHHHHHHHHHHHTSCCC----CCCHHHHHHHHHHHHHHHHHHHHH-----------SCCSSHHHHHHHCT-----TSCHH
T ss_pred             HHHHHHHHHHHHHcccCcccchHHHHHHHHHHHHHHHHHHHHHHh-----------CCCCCHHHHHHhCC-----CCCHH
Confidence            111222222222111000011112236678888899998888765           23578999999875     48999


Q ss_pred             HHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhhcccCCCCCCCCCChhhhhcchhHHHHHHHhhcCCC
Q 047974          280 VMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRNFSQEGFNKPPLVRLNELNKLVYLHAALCETLRLYP  359 (497)
Q Consensus       280 ~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p  359 (497)
                      ++..++..+++||+|||+++++|++++|++||++|+++++|+                       ||++|||+|+||++|
T Consensus       243 el~~~~~~ll~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E~-----------------------~~l~a~i~E~LRl~p  299 (415)
T 3mgx_A          243 DVLLNCDNVLIGGNETTRHAITGAVHALATVPGLLTALRDGS-----------------------ADVDTVVEEVLRWTS  299 (415)
T ss_dssp             HHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSTTHHHHHHHTS-----------------------SCHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCHHHHHHHHhCh-----------------------HhHHHHHHHHHHhcC
Confidence            999999999999999999999999999999999999999985                       489999999999999


Q ss_pred             CCCcccccccCCCcccCCeeeCCCcEEEEeccccccCCCCCCCCCCCCCCCCccCCCCCccCCCCCcccccCCCCCCCcc
Q 047974          360 PVPFEIRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWGEDCREFKPERWITEDGRIRHEPPHKFFSFNAGPRICIG  439 (497)
Q Consensus       360 ~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G  439 (497)
                      +++...|.+.+|.++ +||.||||+.|+++.+++||||++| +||++|||+||.           ..++|||+|+|.|+|
T Consensus       300 p~~~~~R~~~~d~~l-~G~~Ip~G~~V~~~~~a~~rDp~~~-~dP~~F~P~R~~-----------~~~l~FG~G~r~C~G  366 (415)
T 3mgx_A          300 PAMHVLRVTTADVTI-NGRDLPSGTPVVAWLPAANRDPAEF-DDPDTFLPGRKP-----------NRHITFGHGMHHCLG  366 (415)
T ss_dssp             CBCEEEEEESSCEEE-TTEEECTTCEEEEEHHHHTTCTTTS-SSTTSCCTTCCS-----------CCCCTTCCGGGCCTT
T ss_pred             cccccceecCCCeeE-CCEEECCCCEEEechHHhCCChhhc-CCccccCCCCCC-----------CCCCCCCCCCccCcC
Confidence            999888888888666 9999999999999999999999999 999999999972           358999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhhc-eEEeecCccceeeeeEEEeecCceEEEEEec
Q 047974          440 KDIAFTLMKATAASIIHNY-DVQVVKNHPVTYNLSIGFRMKHGLLARVSKR  489 (497)
Q Consensus       440 ~~~A~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  489 (497)
                      ++||++|++++++.|+++| ++++.++.  ....+...+....++|++++|
T Consensus       367 ~~lA~~e~~~~l~~ll~~f~~~~l~~~~--~~~~~~~~~~~~~lpv~~~~R  415 (415)
T 3mgx_A          367 SALARIELSVVLRVLAERVSRVDLEREP--AWLRAIVVQGYRELPVRFTGR  415 (415)
T ss_dssp             HHHHHHHHHHHHHHHHHHEEEEEECSCC--EECSCSSBCCEEECEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCccCCCc--ccccCCcccCceeeeEEEecC
Confidence            9999999999999999999 89997532  223334455567899999987


No 63 
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} PDB: 4fxb_A*
Probab=100.00  E-value=5.1e-57  Score=433.47  Aligned_cols=347  Identities=12%  Similarity=0.130  Sum_probs=279.0

Q ss_pred             hHHHHHHHHHHHhCCeeEEeeeccc-CcceEEEcChhhHHHhhhcCCccccCCcc---cccccc------ccCCcCeeec
Q 047974           49 QLHDKVAQILEKTKGSFMIKGSWVA-QYDMFLTSDPANVQHIMSTNFSKYHKGSE---GRKRFD------IFGETGLFNS  118 (497)
Q Consensus        49 ~~~~~~~~~~~k~g~v~~~~~~~~~-~~~~v~v~~p~~v~~il~~~~~~~~~~~~---~~~~~~------~~g~~~l~~~  118 (497)
                      +++.++.+++++ |||+++   +++ |.++++++||+.+++++.++  .|++++.   +.....      ..+. +++..
T Consensus        30 dp~~~~~~l~~~-Gpv~~~---~~~~g~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~  102 (417)
T 3tyw_A           30 AAPAEYAALRTD-DPVARV---TLPTRREAWVVTRYDDVRELLSDP--RVSADIRRPGFPALGEGEQEAGARFR-PFIRT  102 (417)
T ss_dssp             SCCTHHHHHHHT-CTEEEE---ECTTSCEEEEECCHHHHHHHHHCT--TEECCSSSTTCCCSSTTTSTTSSSCC-CGGGC
T ss_pred             CchHHHHHHHhh-CCeeee---ecCCCCCeEEEcCHHHHHHHHcCC--CcccCCcccccccccccccccccccc-chhhc
Confidence            467788888877 999999   776 58999999999999999875  5665421   222222      2344 88889


Q ss_pred             CCchHHHHHHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHH-HHHHHHHHHHhhcCCCCCCCCC
Q 047974          119 DFDEWKHQRKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLL-KRTTFDFACLIATGHNPNSLSV  197 (497)
Q Consensus       119 ~~~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~v~~~~~fG~~~~~~~~  197 (497)
                      +|+.|+++|+++++.|++++++.+. +.+++. .+.+.+.+.+   .++++|+...+ ..++.++++.+ ||.+.+.   
T Consensus       103 dg~~h~~~R~~~~~~fs~~~l~~~~-~~i~~~-~~~l~~~l~~---~g~~~d~~~~~~~~~~~~vi~~~-~G~~~~~---  173 (417)
T 3tyw_A          103 DAPEHTRYRRMLLPAFTVRRVRAMR-PAVQAR-VDEILDGMLA---AGGPVDLVSAYANAVSTSVICEL-LGIPRHD---  173 (417)
T ss_dssp             CHHHHHHHHHHHGGGGCHHHHHHTH-HHHHHH-HHHHHHHHHH---HCSSEEHHHHTHHHHHHHHHHHH-HTCCTTT---
T ss_pred             CCcHHHHHHHHHHhhhCHHHHHHHH-HHHHHH-HHHHHHHHHh---hCCCcchHHHHHHHHHHHHHHHH-hCCCHHH---
Confidence            9999999999999999999998875 445555 4555555543   34579999988 57889999987 8987642   


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccccccccchhhHHHHHhcCCCCCCCCCc
Q 047974          198 GFPEMGFPDAVDDACEAILIRHLEKKLANGWRTIDQFWEKQKSMKQEEIEKGMEAKEDEGIYSLLNCYLSGHEVTGPTPA  277 (497)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~l~  277 (497)
                         ...+.+....+....   .......++.+.+.+++.+.++++++           ...+|+++.++....++ ..++
T Consensus       174 ---~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~~~i~~r~~-----------~~~~d~l~~ll~~~~~~-~~ls  235 (417)
T 3tyw_A          174 ---LEFFRDVTRISGSRN---STAEQVSEALGGLFGLLGGLVAERRE-----------EPRDDLISKLVTDHLVP-GNVT  235 (417)
T ss_dssp             ---TTHHHHHHHHHHSSS---SCTTHHHHHHHHHHHHHHHHHHHHHS-----------SCCSSHHHHHHHHTTTT-TSSC
T ss_pred             ---HHHHHHHHHHHhccc---CCHHHHHHHHHHHHHHHHHHHHHHhh-----------CCCCCHHHHHHHhcccC-CCCC
Confidence               122333322221110   01235567778888888888887764           23479999999876543 3599


Q ss_pred             hHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhhcccCCCCCCCCCChhhhhcchhHHHHHHHhhcC
Q 047974          278 EKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRNFSQEGFNKPPLVRLNELNKLVYLHAALCETLRL  357 (497)
Q Consensus       278 ~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl  357 (497)
                      ++++..++..+++||+|||+.+++|++++|++||++|+++++|++                       ||+|||+|+||+
T Consensus       236 ~~el~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~-----------------------~l~a~i~E~lRl  292 (417)
T 3tyw_A          236 TEQLLSTLGITINAGRETTTSMIALSTLLLLDRPELPAELRKDPD-----------------------LMPAAVDELLRV  292 (417)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTHHHHHHHHCGG-----------------------GHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCHHHHHHHHhChH-----------------------HHHHHHHHHHHh
Confidence            999999999999999999999999999999999999999999865                       789999999999


Q ss_pred             CCCCCc-ccccccCCCcccCCeeeCCCcEEEEeccccccCCCCCCCCCCCCCCCCccCCCCCccCCCCCcccccCCCCCC
Q 047974          358 YPPVPF-EIRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWGEDCREFKPERWITEDGRIRHEPPHKFFSFNAGPRI  436 (497)
Q Consensus       358 ~p~~~~-~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~  436 (497)
                      +|+++. ..|.+.+|.++ +||.||||+.|+++.+++||||++| +||++|+|+||.           ..|+|||+|+|.
T Consensus       293 ~p~~~~~~~R~~~~d~~l-~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~-----------~~~l~FG~G~r~  359 (417)
T 3tyw_A          293 LSVADSIPLRVAAEDIEL-SGRTVPADDGVIALLAGANHDPEQF-DDPERVDFHRTD-----------NHHVAFGYGVHQ  359 (417)
T ss_dssp             HCSCTTCCEEEESSCEEC-SSCEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTCSC-----------CCCCTTCCSTTC
T ss_pred             ccccccCceeEeCCCeEE-CCEEECCCCEEEEehhhhcCChhhc-CCccccCCCCCC-----------CCCCCCCCCCcc
Confidence            999997 46877777666 9999999999999999999999999 999999999983           358999999999


Q ss_pred             CcchHHHHHHHHHHHHHHHhhc-eEEeecC
Q 047974          437 CIGKDIAFTLMKATAASIIHNY-DVQVVKN  465 (497)
Q Consensus       437 C~G~~~A~~~~~~~l~~ll~~f-~~~~~~~  465 (497)
                      |+|++||++|++++++.|+++| ++++.++
T Consensus       360 C~G~~lA~~e~~~~l~~ll~~fp~~~l~~~  389 (417)
T 3tyw_A          360 CVGQHLARLELEVALETLLRRVPTLRLAGE  389 (417)
T ss_dssp             CSCHHHHHHHHHHHHHHHHHHCTTCEECSC
T ss_pred             CcCHHHHHHHHHHHHHHHHHhCCcccccCC
Confidence            9999999999999999999999 9999753


No 64 
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A*
Probab=100.00  E-value=9.4e-58  Score=438.58  Aligned_cols=371  Identities=14%  Similarity=0.176  Sum_probs=290.0

Q ss_pred             hHHHHHHHHHHHhCCeeEEeeecccCcceEEEcChhhHHHhhhcCCccccCCcc-----cc-c-ccccc----CCcCeee
Q 047974           49 QLHDKVAQILEKTKGSFMIKGSWVAQYDMFLTSDPANVQHIMSTNFSKYHKGSE-----GR-K-RFDIF----GETGLFN  117 (497)
Q Consensus        49 ~~~~~~~~~~~k~g~v~~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~~~~~~-----~~-~-~~~~~----g~~~l~~  117 (497)
                      +++.++.++ ++||||++    + ++.+.++++||+.+++++.++ . |++++.     +. . ....+    +. +++.
T Consensus        27 ~p~~~~~~l-~~~Gpv~~----~-~~~~~vvv~~~~~v~~vl~~~-~-f~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~   97 (419)
T 1q5d_A           27 DPFPAIERL-REATPIFY----W-DEGRSWVLTRYHDVSAVFRDE-R-FAVSREEWESSAEYSSAIPELSDMKKY-GLFG   97 (419)
T ss_dssp             CCHHHHHHH-HHHCSEEE----E-TTTTEEEECSHHHHHHHHTCT-T-EECCGGGSTTHHHHHHSSGGGHHHHHH-STTT
T ss_pred             ChHHHHHHH-HhhCCccc----c-CCCCEEEEecHHHHHHHHcCC-C-ccccccccccccccccccchhhhhccc-cccc
Confidence            467788888 78999986    2 567899999999999999886 3 887761     21 1 11122    44 7888


Q ss_pred             cCCchHHHHHHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHH-HHHHHHHHHHHhhcCCCCCCCC
Q 047974          118 SDFDEWKHQRKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDL-LKRTTFDFACLIATGHNPNSLS  196 (497)
Q Consensus       118 ~~~~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~-~~~~~~~v~~~~~fG~~~~~~~  196 (497)
                      .+|+.|+++|+++.++|+++.++.+. +.+++. .+.+.+.+..   . +.+|+... ...+++++++.+ ||.+.+.  
T Consensus        98 ~~g~~h~~~R~~~~~~fs~~~l~~~~-~~i~~~-~~~ll~~l~~---~-~~~d~~~~~~~~~~~~vi~~~-fG~~~~~--  168 (419)
T 1q5d_A           98 LPPEDHARVRKLVNPSFTSRAIDLLR-AEIQRT-VDQLLDARSG---Q-EEFDVVRDYAEGIPMRAISAL-LKVPAEC--  168 (419)
T ss_dssp             SCHHHHHHHHHHHGGGGSHHHHGGGH-HHHHHH-HHHHHHHHTT---S-SCEETTTTTGGGSHHHHHHHH-TTCCGGG--
T ss_pred             CCchHHHHHHHHHHHhcCHHHHHHHH-HHHHHH-HHHHHHHHHh---c-CCCCHHHHHHHHHHHHHHHHH-hCCCHHH--
Confidence            89999999999999999999998764 445555 4555555543   2 37998864 488999999998 9986531  


Q ss_pred             CCCCCCChHHHHHHHHHHHHHH------HHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccccccccchh-hHHHHHhcCC
Q 047974          197 VGFPEMGFPDAVDDACEAILIR------HLEKKLANGWRTIDQFWEKQKSMKQEEIEKGMEAKEDEGIY-SLLNCYLSGH  269 (497)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-dll~~ll~~~  269 (497)
                          ...+.+....+.......      ...++..++.+.+.+++.+.|+++++.           ..+ |+++.+++..
T Consensus       169 ----~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~-----------~~~~dll~~ll~~~  233 (419)
T 1q5d_A          169 ----DEKFRRFGSATARALGVGLVPRVDEETKTLVASVTEGLALLHGVLDERRRN-----------PLENDVLTMLLQAE  233 (419)
T ss_dssp             ----HHHHHHHHHHHHHHTTTTTSSCCCSCHHHHHHHHHHHHHHHHHHHHHHHHS-----------CCSSCHHHHHHHHH
T ss_pred             ----HHHHHHHHHHHHHhcccccccCChHHHHHHHHHHHHHHHHHHHHHHHHHhC-----------CCCCCHHHHHHhhh
Confidence                112333333332211100      002455677788888888888887641           234 8999998764


Q ss_pred             CCCCCCCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhhcccCCCCCCCCCChhhhhcchhHHH
Q 047974          270 EVTGPTPAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRNFSQEGFNKPPLVRLNELNKLVYLHA  349 (497)
Q Consensus       270 ~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~l~~lp~l~a  349 (497)
                      + ++..++++++..++..+++||+|||+++++|++++|++||++|+++++|++                       |++|
T Consensus       234 ~-~~~~l~~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~-----------------------~l~a  289 (419)
T 1q5d_A          234 A-DGSRLSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSPEALELVKAEPG-----------------------LMRN  289 (419)
T ss_dssp             H-SSTTCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHCHHHHHHHHHCGG-----------------------GHHH
T ss_pred             c-cCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHH-----------------------HHHH
Confidence            3 235689999999999999999999999999999999999999999999842                       7999


Q ss_pred             HHHHhhcCCCCCC-cccccccCCCcccCCeeeCCCcEEEEeccccccCCCCCCCCCCCCCCCCccCCCCCccCCCCCccc
Q 047974          350 ALCETLRLYPPVP-FEIRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWGEDCREFKPERWITEDGRIRHEPPHKFF  428 (497)
Q Consensus       350 ~i~E~lRl~p~~~-~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~  428 (497)
                      ||+|+||++|+++ ...|.+.+|.++ +||.|||||.|+++.+++||||++| +||++|+||||           +..++
T Consensus       290 ~i~E~lRl~p~~~~~~~R~~~~d~~l-~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~-----------~~~~l  356 (419)
T 1q5d_A          290 ALDEVLRFDNILRIGTVRFARQDLEY-CGASIKKGEMVFLLIPSALRDGTVF-SRPDVFDVRRD-----------TSASL  356 (419)
T ss_dssp             HHHHHHHHSCSBSSEEEEEESSCEEE-TTEEECTTCEEEEEHHHHTTCTTTS-SSTTSCCTTSC-----------CTTCC
T ss_pred             HHHHHHHhCCccccccceeeCCCeEE-CCEEECCCCEEEecHHHhcCChhhC-CChhhcCCCCC-----------CCCCC
Confidence            9999999999999 667888777666 9999999999999999999999999 99999999994           13589


Q ss_pred             ccCCCCCCCcchHHHHHHHHHHHHHHHhhc-eEEeecCccceeeeeEEEeecCceEEEEEecCC
Q 047974          429 SFNAGPRICIGKDIAFTLMKATAASIIHNY-DVQVVKNHPVTYNLSIGFRMKHGLLARVSKRSA  491 (497)
Q Consensus       429 ~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  491 (497)
                      |||+|+|.|+|++||++|++++++.|+++| ++++.++.  ......+.+++.+++|+++||..
T Consensus       357 ~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~--~~~~~~~~~~~~~l~v~~~~r~~  418 (419)
T 1q5d_A          357 AYGRGPHVCPGVSLARLEAEIAVGTIFRRFPEMKLKETP--VFGYHPAFRNIESLNVILKPSKA  418 (419)
T ss_dssp             TTCCGGGCCTTHHHHHHHHHHHHHHHHHHCTTCEECSCC--EECCCSSBCCEEECEEESSCC--
T ss_pred             CCCCCCCcCccHHHHHHHHHHHHHHHHHhCCCeEECCCc--ccccccccCCCceeEEEEecCCC
Confidence            999999999999999999999999999999 89998752  23344556677899999999874


No 65 
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A*
Probab=100.00  E-value=3.6e-57  Score=435.46  Aligned_cols=370  Identities=14%  Similarity=0.130  Sum_probs=285.5

Q ss_pred             chHHHHHHHHHHHhCCeeEEeeecccCcceEEEcChhhHHHhhhcCCccccCCccccccc----------cccCCcCeee
Q 047974           48 NQLHDKVAQILEKTKGSFMIKGSWVAQYDMFLTSDPANVQHIMSTNFSKYHKGSEGRKRF----------DIFGETGLFN  117 (497)
Q Consensus        48 ~~~~~~~~~~~~k~g~v~~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~~~~~~~~~~~----------~~~g~~~l~~  117 (497)
                      .+++.++.++ ++||||+++   ++|   .++|++|+.+++++++. ..+...+......          ...+. +++.
T Consensus        29 ~~p~~~~~~l-r~~gpv~~~---~~g---~~vv~~~~~v~~vl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~   99 (418)
T 3r9b_A           29 ADPYPIYDRI-RRGGPLALP---EAN---LAVFSSFSDCDDVLRHP-SSCSDRTKSTIFQRQLAAETQPRPQGPA-SFLF   99 (418)
T ss_dssp             TCCHHHHHHH-HHHCCEEEG---GGT---EEEECSHHHHHHHHHCT-TEECCGGGCHHHHHHHC---------CC-CGGG
T ss_pred             cCchHHHHHH-HhcCCEEEC---CCC---eEEEecHHHHHHHHcCc-ccccCccccccccccccccccccccccc-chhh
Confidence            3577888877 688999987   664   99999999999999774 3333333221111          12344 7888


Q ss_pred             cCCchHHHHHHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHH-HHHHHHHHHHhhcCCCCCCCC
Q 047974          118 SDFDEWKHQRKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLL-KRTTFDFACLIATGHNPNSLS  196 (497)
Q Consensus       118 ~~~~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~v~~~~~fG~~~~~~~  196 (497)
                      .+|+.|+++||++++.|+++.++.+. +.+++. .+.+.+ +.    .++.+|+...+ ..+++++++. +||.+...  
T Consensus       100 ~dg~~h~~~R~~~~~~fs~~~l~~~~-~~i~~~-~~~ll~-l~----~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~--  169 (418)
T 3r9b_A          100 LDPPDHTRLRGLVSKAFAPRVIKRLE-PEITAL-VDQLLD-AV----DGPEFNLIDNLAYPLPVAVICR-LLGVPIED--  169 (418)
T ss_dssp             CCTTHHHHHHHHHHGGGSHHHHGGGH-HHHHHH-HHHHHH-TC----CSSEEEHHHHTTTHHHHHHHHH-HHTCCGGG--
T ss_pred             cCCchHHHHHHHhhhhhCHHHHHHHH-HHHHHH-HHHHHh-hh----ccCCeehHHHHhCcCCHHHHHH-HcCCCHHH--
Confidence            99999999999999999999998865 445555 344444 43    23588987665 5899999999 88976531  


Q ss_pred             CCCCCCChHHHHHHHHHHH--HHH------HHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccccccccchhhHHHHHhcC
Q 047974          197 VGFPEMGFPDAVDDACEAI--LIR------HLEKKLANGWRTIDQFWEKQKSMKQEEIEKGMEAKEDEGIYSLLNCYLSG  268 (497)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~--~~~------~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~dll~~ll~~  268 (497)
                          ...+.+....+....  ...      ...+...++.+.+.+++.+.++++++           ...+|+++.+++.
T Consensus       170 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~-----------~~~~d~l~~ll~~  234 (418)
T 3r9b_A          170 ----EPKFSRASALLAAALDPFLALTGETSDLFDEQMKAGMWLRDYLRALIDERRR-----------TPGEDLMSGLVAV  234 (418)
T ss_dssp             ----HHHHHHHHHHHHHTTSCHHHHHSSCCTTHHHHHHHHHHHHHHHHHHHHHTTT-----------SCCSSHHHHHHHH
T ss_pred             ----HHHHHHHHHHHHhhcCccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHh-----------CCCccHHHHHHHh
Confidence                112333222222110  000      01356667788888888888877654           2357899999976


Q ss_pred             CCCCCCCCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhhcccCCCCCCCCCChhhhhcchhHH
Q 047974          269 HEVTGPTPAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRNFSQEGFNKPPLVRLNELNKLVYLH  348 (497)
Q Consensus       269 ~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~l~~lp~l~  348 (497)
                      .. ++..++++++..++..+++||+|||+++++|++++|++||++|+++++|++                       |++
T Consensus       235 ~~-~~~~ls~~ei~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E~~-----------------------~l~  290 (418)
T 3r9b_A          235 EE-SGDQLTEDEIIATCNLLLIAGHETTVNLIANAALAMLRTPGQWAALAADGS-----------------------RAS  290 (418)
T ss_dssp             HH-HSSSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHSTTHHHHHHHCGG-----------------------GHH
T ss_pred             hh-ccCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCHHHHHHHHhChH-----------------------hHH
Confidence            32 234589999999999999999999999999999999999999999999865                       788


Q ss_pred             HHHHHhhcCCCCCCcccccccCCCcccCCeeeCCCcEEEEeccccccCCCCCCCCCCCCCCCCccCCCCCccCCCCCccc
Q 047974          349 AALCETLRLYPPVPFEIRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWGEDCREFKPERWITEDGRIRHEPPHKFF  428 (497)
Q Consensus       349 a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~  428 (497)
                      |||+|+||++|+++...|.+.+|.++ +||.||||+.|+++.+++||||++| +||++|+|+|.           ...++
T Consensus       291 a~i~E~lRl~p~~~~~~R~~~~d~~l-~g~~Ip~G~~V~~~~~~~~rdp~~~-~dp~~F~p~R~-----------~~~~~  357 (418)
T 3r9b_A          291 AVIEETMRYDPPVQLVSRYAGDDLTI-GTHTVPKGDTMLLLLAAAHRDPTIV-GAPDRFDPDRA-----------QIRHL  357 (418)
T ss_dssp             HHHHHHHHHSCSBCCEEEEESSCEEE-TTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTCS-----------CCCCC
T ss_pred             HHHHHHHHhCCccccceeEeCCCeEE-CCEEECCCCEEEEChHHhcCCcccC-CCcCcCCCCCC-----------CCCCc
Confidence            99999999999999988888887776 9999999999999999999999999 99999999992           34689


Q ss_pred             ccCCCCCCCcchHHHHHHHHHHHHHHHhhc-eEEeecCccceeeeeEEEeecCceEEEEEecC
Q 047974          429 SFNAGPRICIGKDIAFTLMKATAASIIHNY-DVQVVKNHPVTYNLSIGFRMKHGLLARVSKRS  490 (497)
Q Consensus       429 ~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  490 (497)
                      |||+|+|.|+|++||++|++++++.|+++| ++++.++  .....+.++++...++|++++|.
T Consensus       358 ~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~--~~~~~~~~~~~~~~lpv~~~~r~  418 (418)
T 3r9b_A          358 GFGKGAHFCLGAPLARLEATVALPALAARFPEARLSGE--PEYKRNLTLRGMSTLSIAVHHHH  418 (418)
T ss_dssp             TTCCGGGCCTTHHHHHHHHHHHHHHHHHHCTTCEECSC--CEECSCSSBCCEEECEEEC----
T ss_pred             CCCCcCccCccHHHHHHHHHHHHHHHHHhCccceeCCC--CccccCCcccCcceeEEEecCCC
Confidence            999999999999999999999999999999 8999764  34455566777888999999874


No 66 
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida}
Probab=100.00  E-value=7.5e-56  Score=425.36  Aligned_cols=373  Identities=14%  Similarity=0.104  Sum_probs=286.5

Q ss_pred             chHHHHHHHHHHHhCCeeEEeeecc-cCcceEEEcChhhHHHhhhcCCccccCCccc-----cc-----cc-cccCCcCe
Q 047974           48 NQLHDKVAQILEKTKGSFMIKGSWV-AQYDMFLTSDPANVQHIMSTNFSKYHKGSEG-----RK-----RF-DIFGETGL  115 (497)
Q Consensus        48 ~~~~~~~~~~~~k~g~v~~~~~~~~-~~~~~v~v~~p~~v~~il~~~~~~~~~~~~~-----~~-----~~-~~~g~~~l  115 (497)
                      .+++.++..++++ |||+.+   .. ++.+.++|++++.|++++++. ..|++.+..     ..     .. ...+. ++
T Consensus        38 ~~p~~~~~~lr~~-gpv~~~---~~~~~~~~~vvt~~~~v~~vl~d~-~~fs~~~~~~~~~~~~~~~~~~~~~~~~~-~l  111 (426)
T 3rwl_A           38 DSVGEYFKRLRKD-DPVHYC---ADSAFGPYWSITKYNDIMHVDTNH-DIFSSDAGYGGIIIDDGIQKGGDGGLDLP-NF  111 (426)
T ss_dssp             TCHHHHHHHHHHH-CSEEEE---SCCTTCSEEEECSHHHHHHHHHCT-TTEECCGGGTCSSSSCCC-------CCCC-CG
T ss_pred             CCccHHHHHHHhc-CCeeec---cCCCCCCEEEEcCHHHHHHHHcCC-cccccccccCCCCcccccccccccccccC-cc
Confidence            3478888888765 999988   55 566799999999999999876 567665421     11     11 22333 78


Q ss_pred             eecCCchHHHHHHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHH-HHHHHHHHHHhhcCCCCCC
Q 047974          116 FNSDFDEWKHQRKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLL-KRTTFDFACLIATGHNPNS  194 (497)
Q Consensus       116 ~~~~~~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~v~~~~~fG~~~~~  194 (497)
                      +..+|+.|+++|+++++.|+++.++.+. +.+++. .+.+.+.+    ..++.+|+...+ ..++.++++. +||.+...
T Consensus       112 ~~~dg~~h~~~R~~~~~~fs~~~l~~~~-~~i~~~-~~~ll~~l----~~~~~~dl~~~~~~~~~~~vi~~-l~G~~~~~  184 (426)
T 3rwl_A          112 IAMDRPRHDEQRKAVSPIVAPANLAALE-GTIRER-VSKTLDGL----PVGEEFDWVDRVSIEITTQMLAT-LFDFPFEE  184 (426)
T ss_dssp             GGCCTTHHHHHHHHHGGGGCHHHHHHHH-HHHHHH-HHHHHHTS----CSSSCEEHHHHTHHHHHHHHHHH-HHTCCGGG
T ss_pred             cccCchHHHHHHHHhhhhhCHHHHHHHH-HHHHHH-HHHHHHHh----hcCCCcchHHHHHHHHHHHHHHH-HcCCCHHH
Confidence            8899999999999999999999998865 445555 34444443    235689988877 5777887776 78975321


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHH--HHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccccccccchhhHHHHHhcCCCCC
Q 047974          195 LSVGFPEMGFPDAVDDACEAILIR--HLEKKLANGWRTIDQFWEKQKSMKQEEIEKGMEAKEDEGIYSLLNCYLSGHEVT  272 (497)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~  272 (497)
                            ...+.+............  .......++.+.+.+++.+++++++.    .      ...+|+++.+++...+ 
T Consensus       185 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~----~------~~~~dll~~ll~~~~~-  247 (426)
T 3rwl_A          185 ------RRKLTRWSDVTTAAPGGGVVESWDQRKTELLECAAYFQVLWNERVN----K------DPGNDLISMLAHSPAT-  247 (426)
T ss_dssp             ------THHHHHHHHHHTCCTTSSSCSSHHHHHHHHHHHHHHHHHHHHHHHT----S------CCCSSHHHHHHHCGGG-
T ss_pred             ------HHHHHHHHHHHHhccCccccccHHHHHHHHHHHHHHHHHHHHHHhh----c------CCCCCHHHHHHhcccC-
Confidence                  111222211111000000  00334556678888888888887631    1      3457999999987543 


Q ss_pred             CCCCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhhcccCCCCCCCCCChhhhhcchhHHHHHH
Q 047974          273 GPTPAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRNFSQEGFNKPPLVRLNELNKLVYLHAALC  352 (497)
Q Consensus       273 ~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~  352 (497)
                       ..++++++..+++.+++||+|||+++++|++++|++||++|+++++|++                       |+++||+
T Consensus       248 -~~ls~~el~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~lr~E~~-----------------------~l~a~i~  303 (426)
T 3rwl_A          248 -RNMTPEEYLGNVLLLIVGGNDTTRNSMTGGVLALHKNPDQFAKLKANPA-----------------------LVETMVP  303 (426)
T ss_dssp             -GGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG-----------------------GHHHHHH
T ss_pred             -CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHhChH-----------------------hHHHHHH
Confidence             2489999999999999999999999999999999999999999999843                       8999999


Q ss_pred             HhhcCCCCCCcccccccCCCcccCCeeeCCCcEEEEeccccccCCCCCCCCCCCCCCCCccCCCCCccCCCCCcccccCC
Q 047974          353 ETLRLYPPVPFEIRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWGEDCREFKPERWITEDGRIRHEPPHKFFSFNA  432 (497)
Q Consensus       353 E~lRl~p~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~  432 (497)
                      |+||++|+++...|.+.+|.++ +||.||||+.|+++.+++||||++| +||++|||+||..          ..|+|||+
T Consensus       304 E~LRl~p~~~~~~R~~~~d~~l-~G~~Ip~G~~V~~~~~~~~rDp~~f-~dP~~F~p~R~~~----------~~~l~FG~  371 (426)
T 3rwl_A          304 EIIRWQTPLAHMRRTAIADSEL-GGKTIRKGDKVVMWYYSGNRDDEVI-DRPEEFIIDRPRP----------RQHLSFGF  371 (426)
T ss_dssp             HHHHHHCSBCCEEEEESSCEEE-TTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTCSCT----------TCCSTTCC
T ss_pred             HHHHhcCccccCceecCCCeEE-CCEEECCCCEEEechHHhCCCcccc-CCcCccCCCCCCC----------CCccCCCC
Confidence            9999999999988888887777 9999999999999999999999999 9999999999942          46899999


Q ss_pred             CCCCCcchHHHHHHHHHHHHHHHhhc-eEEeecCccceeeeeEEEeecCceEEEEEe
Q 047974          433 GPRICIGKDIAFTLMKATAASIIHNY-DVQVVKNHPVTYNLSIGFRMKHGLLARVSK  488 (497)
Q Consensus       433 G~r~C~G~~~A~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  488 (497)
                      |+|.|+|++||++|++++++.|+++| ++++.++..  ...+...+....++|+++|
T Consensus       372 G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~--~~~~~~~~g~~~lpv~~~P  426 (426)
T 3rwl_A          372 GIHRCVGNRLAEMQLRILWEEILTRFSRIEVMAEPE--RVRSNFVRGYAKMMVRVHA  426 (426)
T ss_dssp             STTSCSSHHHHHHHHHHHHHHHHTTCSEEEECSCCE--ECCCSSBCCEEECEEEEEC
T ss_pred             CCcCCccHHHHHHHHHHHHHHHHHhCccCeeCCCCc--ccccccccCcceeeEEEeC
Confidence            99999999999999999999999999 999976432  2333445556678898876


No 67 
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A*
Probab=100.00  E-value=1.5e-56  Score=427.58  Aligned_cols=359  Identities=12%  Similarity=0.136  Sum_probs=273.6

Q ss_pred             HHHHHhCCeeEEeeeccc-Cc---ceEEEcChhhHHHhhhcCCccccCCccc---------cccc-cccCCcCeeecCCc
Q 047974           56 QILEKTKGSFMIKGSWVA-QY---DMFLTSDPANVQHIMSTNFSKYHKGSEG---------RKRF-DIFGETGLFNSDFD  121 (497)
Q Consensus        56 ~~~~k~g~v~~~~~~~~~-~~---~~v~v~~p~~v~~il~~~~~~~~~~~~~---------~~~~-~~~g~~~l~~~~~~  121 (497)
                      .++++ |||+++   +++ |.   ++++|+||+.+++++.++ ..|.+++.+         .... ...|. +++..+|+
T Consensus        21 ~l~~~-Gpv~~~---~~~~g~~~~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~g~   94 (398)
T 1lfk_A           21 ELLAA-GALTRV---TIGSGADAETHWMATAHAVVRQVMGDH-QQFSTRRRWDPRDEIGGKGIFRPRELVG-NLMDYDPP   94 (398)
T ss_dssp             HHHTS-CSEEEE---C------CCCEEEECSHHHHHHHHHCT-TTEEECTTCCC-------------CCTT-CGGGCCTT
T ss_pred             HHHhc-CCcccc---ccCCCCcccceEEEecHHHHHHHHhhC-cccccccccccccccCCccccccccccc-CccccCCH
Confidence            35554 999998   654 45   899999999999999333 356655431         1111 12344 78888999


Q ss_pred             hHHHHHHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHHHH-HHHHHHHHhhcCCCCCCCCCCCC
Q 047974          122 EWKHQRKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLLKR-TTFDFACLIATGHNPNSLSVGFP  200 (497)
Q Consensus       122 ~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~-~~~~v~~~~~fG~~~~~~~~~~~  200 (497)
                      .|+++|++++++|++++++.+. +.+.+. .+.+.+.+.+   .++++|+.+.+.. ++.++++. +||.+.+.      
T Consensus        95 ~~~~~R~~~~~~fs~~~l~~~~-~~i~~~-~~~l~~~l~~---~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~------  162 (398)
T 1lfk_A           95 EHTRLRRKLTPGFTLRKMQRMA-PYIEQI-VNDRLDEMER---AGSPADLIAFVADKVPGAVLCE-LVGVPRDD------  162 (398)
T ss_dssp             HHHHHHHHHGGGGCHHHHHHHH-HHHHHH-HHHHHHHHHH---HCSSEEHHHHTTTTHHHHHHHH-HHTCCGGG------
T ss_pred             HHHHHHHHHHhhhCHHHHHHHH-HHHHHH-HHHHHHHHHh---cCCCccHHHHHHHHHHHHHHHH-HcCCCHHH------
Confidence            9999999999999999998875 445555 4555555542   2457999999987 88999987 58986531      


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccccccccchhhHHHHHhcCCCCCCCCCchHH
Q 047974          201 EMGFPDAVDDACEAILIRHLEKKLANGWRTIDQFWEKQKSMKQEEIEKGMEAKEDEGIYSLLNCYLSGHEVTGPTPAEKV  280 (497)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~l~~~~  280 (497)
                      ...+.+....+...   ....++..++.+.+.+++.+.|+++++.           ..+|+++.+++..   +..+++++
T Consensus       163 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~r~~~-----------~~~dll~~ll~~~---~~~l~~~e  225 (398)
T 1lfk_A          163 RDMFMKLCHGHLDA---SLSQKRRAALGDKFSRYLLAMIARERKE-----------PGEGMIGAVVAEY---GDDATDEE  225 (398)
T ss_dssp             HHHHHHHHHHTTCT---TSCHHHHHHHHHHHHHHHHHHHHHHHHS-----------CCSSHHHHHHHHH---GGGSCHHH
T ss_pred             HHHHHHHHHHHHhc---ccchHHHHHHHHHHHHHHHHHHHHHHhC-----------CCCCHHHHHHHhc---CCCCCHHH
Confidence            11222222221110   0012456677788888999888887652           2468999998764   13589999


Q ss_pred             HHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhhcccCCCCCCCCCChhhhhcchhHHHHHHHhhcCCCC
Q 047974          281 MRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRNFSQEGFNKPPLVRLNELNKLVYLHAALCETLRLYPP  360 (497)
Q Consensus       281 i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~  360 (497)
                      +.+++..+++||+|||+.+++|++++|++||++|+++++|++                       |++|||+|+||++|+
T Consensus       226 l~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~-----------------------~l~a~i~E~lRl~p~  282 (398)
T 1lfk_A          226 LRGFCVQVMLAGDDNISGMIGLGVLAMLRHPEQIDAFRGDEQ-----------------------SAQRAVDELIRYLTV  282 (398)
T ss_dssp             HHHHHHHHHHHTSHHHHHHHHHHHHHHHHSGGGGGGGSSCHH-----------------------HHHHHHHHHHHHHCC
T ss_pred             HHHHHHHHHHHhccHHHHHHHHHHHHHHHCHHHHHHHHhCHH-----------------------HHHHHHHHHHHhCcc
Confidence            999999999999999999999999999999999999999865                       789999999999999


Q ss_pred             CC-cccccccCCCcccCCeeeCCCcEEEEeccccccCCCCCCCCCCCCCCCCccCCCCCccCCCCCcccccCCCCCCCcc
Q 047974          361 VP-FEIRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWGEDCREFKPERWITEDGRIRHEPPHKFFSFNAGPRICIG  439 (497)
Q Consensus       361 ~~-~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G  439 (497)
                      ++ ...|.+.+|.++ +||.|||||.|+++.+++||||++| +||++|+||||.           ..++|||+|+|.|+|
T Consensus       283 ~~~~~~R~~~~d~~l-~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~-----------~~~l~FG~G~r~C~G  349 (398)
T 1lfk_A          283 PYSPTPRIAREDLTL-AGQEIKKGDSVICSLPAANRDPALA-PDVDRLDVTREP-----------IPHVAFGHGVHHCLG  349 (398)
T ss_dssp             BSCCSCEEESSCEEE-TTEEECTTCEEEECHHHHTTCTTTC-TTTTSCCTTSCC-----------CCCCTTCCSTTSCTT
T ss_pred             cccccceecCCCeeE-CCEEECCCCEEEeChHHhCCCchhc-CCccccCCCCCC-----------CCCCCCCCCCCcCCC
Confidence            99 567888777666 9999999999999999999999999 999999999973           358999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhhc-eEEeecC-ccceeeeeEEEeecCceEEE
Q 047974          440 KDIAFTLMKATAASIIHNY-DVQVVKN-HPVTYNLSIGFRMKHGLLAR  485 (497)
Q Consensus       440 ~~~A~~~~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~~~  485 (497)
                      ++||++|++++++.|+++| ++++.++ .+.....+...+....++|+
T Consensus       350 ~~lA~~e~~~~l~~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~  397 (398)
T 1lfk_A          350 AALARLELRTVFTELWRRFPALRLADPAQDTEFRLTTPAYGLTELMVA  397 (398)
T ss_dssp             HHHHHHHHHHHHHHHHHHCTTCEESSTTCCCEEECSSSBCEEEECEEE
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCEeCCCCCccccccCcCcCCcccceee
Confidence            9999999999999999999 8999743 33333344444445556654


No 68 
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} SCOP: a.104.1.0 PDB: 3o1a_A*
Probab=100.00  E-value=8e-56  Score=421.18  Aligned_cols=363  Identities=12%  Similarity=0.137  Sum_probs=286.1

Q ss_pred             chHHHHHHHHHHHhCCeeEEeeecccC----cceEEEcChhhHHHhhhcCCccccCCccccccc--cccCCcCeeecCCc
Q 047974           48 NQLHDKVAQILEKTKGSFMIKGSWVAQ----YDMFLTSDPANVQHIMSTNFSKYHKGSEGRKRF--DIFGETGLFNSDFD  121 (497)
Q Consensus        48 ~~~~~~~~~~~~k~g~v~~~~~~~~~~----~~~v~v~~p~~v~~il~~~~~~~~~~~~~~~~~--~~~g~~~l~~~~~~  121 (497)
                      .+++.++.++ ++||||+++   ++++    .++++++||+++++++++. ..|++++.+....  ...+. +++..+|+
T Consensus        12 ~~p~~~~~~l-r~yGpv~~~---~~~~~~~g~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~-~~~~~~g~   85 (384)
T 3oo3_A           12 LDPVPEFEEL-QKAGPLHEY---DTEPGMDGRKQWLVTGHDEVRAILADH-ERFSSMRPVDDEADRALLPG-ILQAYDPP   85 (384)
T ss_dssp             TEECHHHHHH-HHTCSEECC---CCC------CEEEECCHHHHHHHHHCT-TTEECSCCCC-----CCCTT-CGGGCCTT
T ss_pred             cChhHHHHHH-HhcCCeeec---ccccccCCCCEEEEcCHHHHHHHHhCc-hhccCCcccccccccccccc-ccccCCCh
Confidence            3467788888 599999998   7765    8999999999999999654 6888877654322  22334 67788999


Q ss_pred             hHHHHHHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCC
Q 047974          122 EWKHQRKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLLKRTTFDFACLIATGHNPNSLSVGFPE  201 (497)
Q Consensus       122 ~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~v~~~~~fG~~~~~~~~~~~~  201 (497)
                      .|+++|+++++.|++++++.+.+ .+.+. .+.+.+.+.+   .++++|+.+.+...+.+.+...+||.+.+.      .
T Consensus        86 ~~~~~R~~~~~~fs~~~l~~~~~-~i~~~-~~~l~~~l~~---~~~~~d~~~~~~~~~~~~v~~~~~G~~~~~------~  154 (384)
T 3oo3_A           86 DHTRLRRTVAPAYSARRMERLRP-RIEEI-VEECLDDFES---VGAPVDFVRHAAWPIPAYIACEFLGVPRDD------Q  154 (384)
T ss_dssp             HHHHHHHHHGGGGCHHHHHHHHH-HHHHH-HHHHHHHHHH---SCSSEEHHHHTTTHHHHHHHHHHHTCCGGG------H
T ss_pred             hHHHHHHHHHHhhCHHHHHHHHH-HHHHH-HHHHHHHHHh---cCCCccHHHHHHHHHHHHHHHHHcCCCHHH------H
Confidence            99999999999999999998754 45555 4555555543   356899999999888777777789976531      1


Q ss_pred             CChHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccccccccchhhHHHHHhcCCCCCCCCCchHHH
Q 047974          202 MGFPDAVDDACEAILIRHLEKKLANGWRTIDQFWEKQKSMKQEEIEKGMEAKEDEGIYSLLNCYLSGHEVTGPTPAEKVM  281 (497)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~l~~~~i  281 (497)
                      ..+.+.+..+..    ....+...++.+.+.+++.+.++++++           ...+|+++.+++..   +..++++++
T Consensus       155 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~-----------~~~~d~l~~ll~~~---~~~l~~~~l  216 (384)
T 3oo3_A          155 AELSRMIRESRE----SRLPRQRTLSGLGIVNYTKRLTSGKRR-----------DPGDGMIGVIVREH---GAEISDEEL  216 (384)
T ss_dssp             HHHHHHHHHHHH----CSCHHHHHHHHHHHHHHHHHHHHHHHH-----------SCCSSHHHHHHHHH---GGGSCHHHH
T ss_pred             HHHHHHHHHHhc----cCChHHHHHHHHHHHHHHHHHHHHHHh-----------CCCCCHHHHHHHhc---CCCCCHHHH
Confidence            223333332222    111445667788888999988887654           23468999999862   245899999


Q ss_pred             HHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhhcccCCCCCCCCCChhhhhcchhHHHHHHHhhcCCCCC
Q 047974          282 RDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRNFSQEGFNKPPLVRLNELNKLVYLHAALCETLRLYPPV  361 (497)
Q Consensus       282 ~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~  361 (497)
                      ..++..+++||+|||+++++|++++|++||++|+++++|++.                       ++|||+|+||++|++
T Consensus       217 ~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~~~~l~~E~~~-----------------------l~a~i~E~lRl~p~~  273 (384)
T 3oo3_A          217 AGLAEGNLIMAAEQMAAQLAVAVLLLVTHPDQMALLREKPEL-----------------------IDSATEEVLRHASIV  273 (384)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHHHCGGG-----------------------HHHHHHHHHHHHCSC
T ss_pred             HHHHHHHHHhhHHHHHHHHHHHHHHHHHCHHHHHHHHhCHHH-----------------------HHHHHHHHHHhCCcc
Confidence            999999999999999999999999999999999999999773                       789999999999999


Q ss_pred             Cc-ccccccCCCcccCCeeeCCCcEEEEeccccccCCCCCCCCCCCCCCCCccCCCCCccCCCCCcccccCCCCCCCcch
Q 047974          362 PF-EIRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWGEDCREFKPERWITEDGRIRHEPPHKFFSFNAGPRICIGK  440 (497)
Q Consensus       362 ~~-~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~  440 (497)
                      +. ..|.+.+|.++ +||.|||||.|+++.+++||      +||++|+||||           ...|+|||+|+|.|+|+
T Consensus       274 ~~~~~R~~~~d~~~-~g~~Ip~Gt~V~~~~~~~~r------~dp~~F~PeR~-----------~~~~~~FG~G~r~C~G~  335 (384)
T 3oo3_A          274 EAPAPRVALADVRM-AGRDIHAGDVLTCSMLATNR------APGDRFDITRE-----------KATHMAFGHGIHHCIGA  335 (384)
T ss_dssp             SCCSCEEESSCEEE-TTEEECTTCEEEECHHHHHC------CTTCCCCTTCS-----------CCCCCTTCCSTTSCTTH
T ss_pred             cCCcceeeCCCEEE-CCEEECCCCEEEEehhhcCC------CCcceeCCCCC-----------CCCcCCCCCCCcCCCCH
Confidence            86 56888877666 99999999999999999999      89999999995           34699999999999999


Q ss_pred             HHHHHHHHHHHHHHHhhc-eEEeecCc-cceeee-eEEEeecCceEEEE
Q 047974          441 DIAFTLMKATAASIIHNY-DVQVVKNH-PVTYNL-SIGFRMKHGLLARV  486 (497)
Q Consensus       441 ~~A~~~~~~~l~~ll~~f-~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~  486 (497)
                      +||++|++++++.|+++| ++++.++. +..... +...+....++|++
T Consensus       336 ~lA~~e~~~~l~~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~~lpv~~  384 (384)
T 3oo3_A          336 PLARLQLRVALPAVVGRFPSLRLAVPEEDLRFKPGRPAPFAVEELPLEW  384 (384)
T ss_dssp             HHHHHHHHHHHHHHHHHCTTCEESSCGGGCCEECSSSSCCEESCCEEEC
T ss_pred             HHHHHHHHHHHHHHHHhCCCCeeCCCCccceeecccccccCcceeeeeC
Confidence            999999999999999999 99998643 333343 45556666777763


No 69 
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A*
Probab=100.00  E-value=4.9e-57  Score=430.31  Aligned_cols=365  Identities=12%  Similarity=0.081  Sum_probs=278.0

Q ss_pred             hHHHHHHHHHHHhCCeeEEeeecc-cCcceEEEcChhhHHHhhhcCCcccc-C-Cccc--ccc-----ccccCCcCeeec
Q 047974           49 QLHDKVAQILEKTKGSFMIKGSWV-AQYDMFLTSDPANVQHIMSTNFSKYH-K-GSEG--RKR-----FDIFGETGLFNS  118 (497)
Q Consensus        49 ~~~~~~~~~~~k~g~v~~~~~~~~-~~~~~v~v~~p~~v~~il~~~~~~~~-~-~~~~--~~~-----~~~~g~~~l~~~  118 (497)
                      +++.++.++ ++||||+++   ++ ++.+.++++||+++++++.++  .|. + ++..  ...     ....|. ++++.
T Consensus        17 ~p~~~~~~l-~~yGpv~~~---~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~   89 (396)
T 1n40_A           17 RIPDAVAEL-RTREPIRKV---RTITGAEAWLVSSYALCTQVLEDR--RFSMKETAAAGAPRLNALTVPPEVVN-NMGNI   89 (396)
T ss_dssp             SCCHHHHHH-HHHCSEEEE---ECTTSCEEEEECSHHHHHHHHTCT--TEESGGGGSTTCCCSSCCSSCGGGGG-HHHHH
T ss_pred             CccHHHHHH-HHhCCeeEe---ecCCCceEEEEecHHHHHHHHhCC--CcccccCccccccccccccCCchhhh-hhhhH
Confidence            467788888 999999999   76 788999999999999999875  465 4 4321  111     122344 66655


Q ss_pred             CCchHHHHHHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHH-HHHHHHHHHHhhcCCCCCCCCC
Q 047974          119 DFDEWKHQRKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLL-KRTTFDFACLIATGHNPNSLSV  197 (497)
Q Consensus       119 ~~~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~v~~~~~fG~~~~~~~~  197 (497)
                         .|+++||++.+.|+++ ++.+. +.+.+. .+.+.+.+.+   +++++|+...+ ..++.++++. +||.+.+.   
T Consensus        90 ---~h~~~R~~~~~~fs~~-~~~~~-~~i~~~-~~~l~~~l~~---~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~---  156 (396)
T 1n40_A           90 ---ADAGLRKAVMKAITPK-APGLE-QFLRDT-ANSLLDNLIT---EGAPADLRNDFADPLATALHCK-VLGIPQED---  156 (396)
T ss_dssp             ---HHTTCHHHHHHHTSSC-STTHH-HHHHHH-HHHHHHHHHH---HCSCEETTTTTHHHHHHHHHHH-HHTCCGGG---
T ss_pred             ---HHHHHHHHHHHhhChH-HHHhH-HHHHHH-HHHHHHHHHh---cCCCccHHHHHHHHhHHHHHHH-HhCCChhh---
Confidence               9999999999999998 87764 445555 4555555543   14679998665 4799999998 78986531   


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccccccccchhhHHHHHhcCC-CCCCCCC
Q 047974          198 GFPEMGFPDAVDDACEAILIRHLEKKLANGWRTIDQFWEKQKSMKQEEIEKGMEAKEDEGIYSLLNCYLSGH-EVTGPTP  276 (497)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~dll~~ll~~~-~~~~~~l  276 (497)
                         ...+.+....+..... ....++..++.+.+ +++.+.++       ..      ...+|+++.+++.. ++++..+
T Consensus       157 ---~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~-~~~~~~i~-------~~------~~~~dll~~ll~~~~~~~~~~l  218 (396)
T 1n40_A          157 ---GPKLFRSLSIAFMSSA-DPIPAAKINWDRDI-EYMAGILE-------NP------NITTGLMGELSRLRKDPAYSHV  218 (396)
T ss_dssp             ---HHHHHHTHHHHTBCCS-SCCHHHHHHHHHHH-HHHHHHHH-------CT------TCCSHHHHHHHHHHTSGGGTTS
T ss_pred             ---HHHHHHHHHHHhcccc-CCCHHHHHHHHHHH-HHHHHHHh-------CC------CCCCCHHHHHHHhhcccccCCC
Confidence               1122222222211000 00013444555666 66666665       11      12468999998764 2134568


Q ss_pred             chHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhhcccCCCCCCCCCChhhhhcchhHHHHHHHhhc
Q 047974          277 AEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRNFSQEGFNKPPLVRLNELNKLVYLHAALCETLR  356 (497)
Q Consensus       277 ~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lR  356 (497)
                      +++++..++..+++||+|||+.+++|++++|++||++|+++++|++                       |++|||+|+||
T Consensus       219 ~~~~i~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~-----------------------~l~a~i~E~lR  275 (396)
T 1n40_A          219 SDELFATIGVTFFGAGVISTGSFLTTALISLIQRPQLRNLLHEKPE-----------------------LIPAGVEELLR  275 (396)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG-----------------------GHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcChHHHHHHHhCHH-----------------------HHHHHHHHHHh
Confidence            9999999999999999999999999999999999999999999853                       79999999999


Q ss_pred             CCCCCC-cccccccCCCcccCCeeeCCCcEEEEeccccccCCCCCCCCCCCCCCCCccCCCCCccCCCCCcccccCCCCC
Q 047974          357 LYPPVP-FEIRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWGEDCREFKPERWITEDGRIRHEPPHKFFSFNAGPR  435 (497)
Q Consensus       357 l~p~~~-~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r  435 (497)
                      ++|+++ ...|.+.+|.++ +||.|||||.|+++.+++||||++| +||++|+||||.+          ..++|||+|+|
T Consensus       276 l~p~~~~~~~R~~~~d~~~-~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~~----------~~~~~FG~G~r  343 (396)
T 1n40_A          276 INLSFADGLPRLATADIQV-GDVLVRKGELVLVLLEGANFDPEHF-PNPGSIELDRPNP----------TSHLAFGRGQH  343 (396)
T ss_dssp             TCCCBCSCEEEEESSCEEE-TTEEECTTCEEEECHHHHHTCTTTS-SSTTSCCTTCSST----------TCSSTTCCGGG
T ss_pred             hCCCcccccceecCCCeeE-CCEEECCCCEEEechHHhhCChhhC-CChhhCCCCCCCC----------CCCCCCCCCCc
Confidence            999999 677888877666 9999999999999999999999999 9999999999963          36899999999


Q ss_pred             CCcchHHHHHHHHHHHHHHHhhc-eEEeecC-ccceeeeeEEEeecCceEEEE
Q 047974          436 ICIGKDIAFTLMKATAASIIHNY-DVQVVKN-HPVTYNLSIGFRMKHGLLARV  486 (497)
Q Consensus       436 ~C~G~~~A~~~~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  486 (497)
                      .|+|++||++|++++++.|+++| ++++.++ .+.....+.+.+...+++|++
T Consensus       344 ~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~  396 (396)
T 1n40_A          344 FCPGSALGRRHAQIGIEALLKKMPGVDLAVPIDQLVWRTRFQRRIPERLPVLW  396 (396)
T ss_dssp             CCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCBCCSBSBCCBSCCEEEC
T ss_pred             CCCCHHHHHHHHHHHHHHHHHhCccccccCCccccccccccccCCcceeeeeC
Confidence            99999999999999999999999 5999764 333444555667777888764


No 70 
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A*
Probab=100.00  E-value=2.2e-55  Score=414.26  Aligned_cols=351  Identities=17%  Similarity=0.144  Sum_probs=273.4

Q ss_pred             HHHHHHHHHHhCCeeEEeeecccCcceEEEcChhhHHHhhhcCCccccCCcc-cc-cc-----c-cccC---CcCeeecC
Q 047974           51 HDKVAQILEKTKGSFMIKGSWVAQYDMFLTSDPANVQHIMSTNFSKYHKGSE-GR-KR-----F-DIFG---ETGLFNSD  119 (497)
Q Consensus        51 ~~~~~~~~~k~g~v~~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~~~~~~-~~-~~-----~-~~~g---~~~l~~~~  119 (497)
                      +..+.++ ++||||+++   +  |  .+++++|+.+++++.++ ..|++++. +. ..     . .+.|   ..++++.+
T Consensus         2 ~~~~~~l-r~~gpv~~~---~--g--~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d   72 (367)
T 3b4x_A            2 YDWFKQM-RKESPVYYD---G--K--VWNLFKYEDCKMVLNDH-KRFSSNLTGYNDKLEMLRSGKVFFDIPTRYTMLTSD   72 (367)
T ss_dssp             HHHHHHH-HHHCSEEEC---S--S--SEEECSHHHHHHHHHCT-TTEECCCSSTTTTHHHHHHTCCCCCCGGGSSGGGCC
T ss_pred             CHHHHHH-HHcCCceee---C--C--EEEEecHHHHHHHHcCc-hhhccCcccccccccccccccchhhcccccccccCC
Confidence            3455555 589999987   5  2  89999999999999876 57877642 21 12     2 3445   23888899


Q ss_pred             CchHHHHHHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHH-HHHHHHHHHHhhcCCCCCCCCCC
Q 047974          120 FDEWKHQRKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLL-KRTTFDFACLIATGHNPNSLSVG  198 (497)
Q Consensus       120 ~~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~v~~~~~fG~~~~~~~~~  198 (497)
                      |+.|+++||+++++|+++.++.   +.+++. .+.+.+.+.     + .+|+...+ ..+++++++. +||.+ +.    
T Consensus        73 g~~h~~~R~~~~~~fs~~~l~~---~~i~~~-~~~l~~~l~-----g-~~d~~~~~~~~~~~~vi~~-~~G~~-~~----  136 (367)
T 3b4x_A           73 PPLHDELRNLTADAFNPSNLPV---DFVREV-TVKLLSELD-----E-EFDVIESFAIPLPILVISK-MLGIN-PD----  136 (367)
T ss_dssp             TTHHHHHHHTTGGGGSGGGSCH---HHHHHH-HHHHHHTCC-----S-EEEHHHHTTTHHHHHHHHH-HHTCC-CC----
T ss_pred             chhHHHHHHHHHHhcCHhhhcc---hHHHHH-HHHHHHhcc-----C-CcchHHHHHHhhHHHHHHH-HcCCC-Cc----
Confidence            9999999999999999998876   345554 444444443     3 49999765 7999999999 78986 31    


Q ss_pred             CCCCChHHHHHHHHHHHH-HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccccccccchhhHHHHHhcCCCCCCCCCc
Q 047974          199 FPEMGFPDAVDDACEAIL-IRHLEKKLANGWRTIDQFWEKQKSMKQEEIEKGMEAKEDEGIYSLLNCYLSGHEVTGPTPA  277 (497)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~l~  277 (497)
                        ...+.+....+..... .....+.. ++.+.+.+++.+.++++++           ...+|+++.+++.      .++
T Consensus       137 --~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~~i~~r~~-----------~~~~dll~~ll~~------~ls  196 (367)
T 3b4x_A          137 --VKKVKDWSDLVALRLGRADEIFSIG-RKYLELISFSKKELDSRKG-----------KEIVDLTGKIANS------NLS  196 (367)
T ss_dssp             --HHHHHHHHHHHHTTTTSTTGGGCCC-HHHHHHHHHHHHHHHHHTT-----------TCCSSHHHHHHTS------SSC
T ss_pred             --HHHHHHHHHHHHhccCCChhhHHHH-HHHHHHHHHHHHHHHHHhc-----------CCCCCHHHHHHhc------cCC
Confidence              1223333332221100 00001112 5667788888888877654           1246899999976      389


Q ss_pred             hHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhhcccCCCCCCCCCChhhhhcchhHHHHHHHhhcC
Q 047974          278 EKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRNFSQEGFNKPPLVRLNELNKLVYLHAALCETLRL  357 (497)
Q Consensus       278 ~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl  357 (497)
                      ++++.+++..+++||+|||+++++|++++|++ |++|+++++|++                         +|||+|+||+
T Consensus       197 ~~el~~~~~~l~~AG~eTt~~~l~~~l~~L~~-P~~~~~l~~e~~-------------------------~a~i~E~lRl  250 (367)
T 3b4x_A          197 ELEKEGYFILLMIAGNETTTNLIGNAIEDFTL-YNSWDYVREKGA-------------------------LKAVEEALRF  250 (367)
T ss_dssp             HHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHH-TTCHHHHHHHCS-------------------------HHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhC-HHHHHHHHhCCc-------------------------hHHHHHHHHh
Confidence            99999999999999999999999999999999 999999999843                         5999999999


Q ss_pred             CCCCCcccccccCCCcccCCeeeCCCcEEEEeccccccCCCCCCCCCCCCCCCCccCCCCCccCCCCCcccccCCCCCCC
Q 047974          358 YPPVPFEIRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWGEDCREFKPERWITEDGRIRHEPPHKFFSFNAGPRIC  437 (497)
Q Consensus       358 ~p~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C  437 (497)
                      +|+++...|.+.+|.++ +||.|||||.|+++.+++||||++| +||++|+||||.           ..++|||+|+|.|
T Consensus       251 ~p~~~~~~R~~~~d~~l-~g~~Ip~Gt~V~~~~~~~~rdp~~~-~dp~~F~PeR~~-----------~~~l~FG~G~r~C  317 (367)
T 3b4x_A          251 SPPVMRTIRVTKEKVKI-RDQVIDEGELVRVWIASANRDEEVF-KDPDSFIPDRTP-----------NPHLSFGSGIHLC  317 (367)
T ss_dssp             SCSBCCEEEEESSCEEE-TTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTCSS-----------CCCCTTCCSTTSC
T ss_pred             cCcccCeeEEeCCCeEE-CCEEECCCCEEEEChhhhcCCcccC-CCccccCCCCCC-----------CCCcCCCCCCccC
Confidence            99999777888877666 9999999999999999999999999 999999999983           3589999999999


Q ss_pred             cchHHHHHHHHHHHHHHHhhc-eEEeecCccceeeeeEEEeecCceEEEEEe
Q 047974          438 IGKDIAFTLMKATAASIIHNY-DVQVVKNHPVTYNLSIGFRMKHGLLARVSK  488 (497)
Q Consensus       438 ~G~~~A~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  488 (497)
                      +|++||++|++++++.|+++| ++++.++   ....+...+....++|++++
T Consensus       318 ~G~~lA~~e~~~~l~~ll~~f~~~~l~~~---~~~~~~~~~~~~~lpv~~~~  366 (367)
T 3b4x_A          318 LGAPLARLEARIALEEFAKKFRVKEIVKK---EKIDNEVLNGYRKLVVRVER  366 (367)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHEEEEEEEEE---EECCCSSBCSEEEEEEEEEE
T ss_pred             ccHHHHHHHHHHHHHHHHHhCCCceeCCc---cccccccccCcceEEEEecC
Confidence            999999999999999999999 7999874   23334455666788988864


No 71 
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A*
Probab=100.00  E-value=2.9e-55  Score=414.14  Aligned_cols=353  Identities=16%  Similarity=0.172  Sum_probs=269.4

Q ss_pred             HHHHHHHHHHhCCeeEEeeecccCcceEEEcChhhHHHhhhcCCccccCCcc-----cccc------cc-ccCCcCeeec
Q 047974           51 HDKVAQILEKTKGSFMIKGSWVAQYDMFLTSDPANVQHIMSTNFSKYHKGSE-----GRKR------FD-IFGETGLFNS  118 (497)
Q Consensus        51 ~~~~~~~~~k~g~v~~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~~~~~~-----~~~~------~~-~~g~~~l~~~  118 (497)
                      +.++.++ ++||||+++      + +.+++++++.+++++.++ ..|++++.     +...      .. ..|. +++..
T Consensus         2 ~~~~~~l-r~~Gpv~~~------g-~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~   71 (368)
T 1io7_A            2 YDWFSEM-RKKDPVYYD------G-NIWQVFSYRYTKEVLNNF-SKFSSDLTGYHERLEDLRNGKIRFDIPTRY-TMLTS   71 (368)
T ss_dssp             HHHHHHH-HHHCSEEEC------S-SCEEECSHHHHHHHHHCT-TTEECCCSSHHHHHHHHTTTCCCCSCGGGS-SGGGC
T ss_pred             CHHHHHH-HhcCCeEeE------C-CEEEEecHHHHHHHHcCc-cccccccccccccccccccccccccccccc-ccccC
Confidence            4456666 589999854      2 589999999999999875 56877763     2211      11 1224 78889


Q ss_pred             CCchHHHHHHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHH-HHHHHHHHHHhhcCCCCCCCCC
Q 047974          119 DFDEWKHQRKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLL-KRTTFDFACLIATGHNPNSLSV  197 (497)
Q Consensus       119 ~~~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~v~~~~~fG~~~~~~~~  197 (497)
                      +|+.|+++|++++++|+++.++.+. +.+++. .+.+.+.+ +   . +.+|+.+.+ ..+++++++.+ ||.+.+..  
T Consensus        72 ~g~~h~~~R~~~~~~f~~~~~~~~~-~~i~~~-~~~l~~~l-~---~-g~~d~~~~~~~~~~~~vi~~~-~G~~~~~~--  141 (368)
T 1io7_A           72 DPPLHDELRSMSADIFSPQKLQTLE-TFIRET-TRSLLDSI-D---P-REDDIVKKLAVPLPIIVISKI-LGLPIEDK--  141 (368)
T ss_dssp             CTTHHHHHHGGGTTTTCHHHHHHHH-HHHHHH-HHHHHHTC-C---T-TSEEHHHHTTTHHHHHHHHHH-HTCCGGGH--
T ss_pred             CChHHHHHHHHHHhhcCHHHHHHHH-HHHHHH-HHHHHHHh-h---c-CCccHHHHHHHHHHHHHHHHH-hCCCHHHH--
Confidence            9999999999999999999998865 445555 44455554 2   2 369999876 78999999998 99865321  


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccccccccchhhHHHHHhcCCCCCCCCCc
Q 047974          198 GFPEMGFPDAVDDACEAILIRHLEKKLANGWRTIDQFWEKQKSMKQEEIEKGMEAKEDEGIYSLLNCYLSGHEVTGPTPA  277 (497)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~l~  277 (497)
                          ..+.+....+..........++..++.+.+.+++.+.+        .        ..+|+++.+++.      .++
T Consensus       142 ----~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~i--------~--------~~~d~l~~ll~~------~l~  195 (368)
T 1io7_A          142 ----EKFKEWSDLVAFRLGKPGEIFELGKKYLELIGYVKDHL--------N--------SGTEVVSRVVNS------NLS  195 (368)
T ss_dssp             ----HHHHHHGGGCTTSCCCTTCHHHHHHHHHHHHHHHHHHT--------T--------SSCHHHHHHHTS------SCC
T ss_pred             ----HHHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHHHHh--------C--------CCCCHHHHHHhc------cCC
Confidence                11111111111000000001234445556666666655        1        136899999976      389


Q ss_pred             hHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhhcccCCCCCCCCCChhhhhcchhHHHHHHHhhcC
Q 047974          278 EKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRNFSQEGFNKPPLVRLNELNKLVYLHAALCETLRL  357 (497)
Q Consensus       278 ~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl  357 (497)
                      ++++.+++..+++||+|||+++++|++++|++|| +|+++++| +                       |++|||+|+||+
T Consensus       196 ~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P-~~~~l~~E-~-----------------------~l~a~i~E~lRl  250 (368)
T 1io7_A          196 DIEKLGYIILLLIAGNETTTNLISNSVIDFTRFN-LWQRIREE-N-----------------------LYLKAIEEALRY  250 (368)
T ss_dssp             HHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTT-CHHHHHHH-T-----------------------CHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCh-HHHHHHhc-c-----------------------hHHHHHHHHHHh
Confidence            9999999999999999999999999999999999 99999998 2                       688999999999


Q ss_pred             CCCCCcccccccCCCcccCCeeeCCCcEEEEeccccccCCCCCCCCCCCCCCCCccCCCCCccCCCCCcccccCCCCCCC
Q 047974          358 YPPVPFEIRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWGEDCREFKPERWITEDGRIRHEPPHKFFSFNAGPRIC  437 (497)
Q Consensus       358 ~p~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C  437 (497)
                      +|+++...|.+.+|.++ +||.|||||.|+++.+++||||++| +||++|+|||+           +..++|||+|+|.|
T Consensus       251 ~p~~~~~~R~~~~d~~l-~g~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~-----------~~~~~~FG~G~r~C  317 (368)
T 1io7_A          251 SPPVMRTVRKTKERVKL-GDQTIEEGEYVRVWIASANRDEEVF-HDGEKFIPDRN-----------PNPHLSFGSGIHLC  317 (368)
T ss_dssp             SCSBCCEEEEESSCEEE-TTEEECTTCEEEECHHHHTTCTTTS-TTTTSCCTTCC-----------SCCCCTTCCGGGSC
T ss_pred             CcccccCceeeCCCeeE-CCEEECCCCEEEecHhhhCCChhhC-CCcceeCCCCC-----------CCCCcCCCCCccCC
Confidence            99999777888887666 9999999999999999999999999 99999999993           13589999999999


Q ss_pred             cchHHHHHHHHHHHHHHHhhce-EEeecCccceeeeeEEEeecCceEEEEEecC
Q 047974          438 IGKDIAFTLMKATAASIIHNYD-VQVVKNHPVTYNLSIGFRMKHGLLARVSKRS  490 (497)
Q Consensus       438 ~G~~~A~~~~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  490 (497)
                      +|++||++|++++++.|+++|+ +++.+ .  ........+...+++|++++|+
T Consensus       318 ~G~~lA~~e~~~~l~~ll~~f~~~~~~~-~--~~~~~~~~~~~~~lpv~~~~r~  368 (368)
T 1io7_A          318 LGAPLARLEARIAIEEFSKRFRHIEILD-T--EKVPNEVLNGYKRLVVRLKSNE  368 (368)
T ss_dssp             TTHHHHHHHHHHHHHHHHTTCSEEEEEE-E--EECCCSSBCCEEEEEEEEEC--
T ss_pred             CCHHHHHHHHHHHHHHHHHhCCCCEecC-c--eeccCCcccCCceeEEEeccCC
Confidence            9999999999999999999996 99976 2  2233445566678999999984


No 72 
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A*
Probab=100.00  E-value=5.1e-54  Score=408.88  Aligned_cols=367  Identities=13%  Similarity=0.079  Sum_probs=279.2

Q ss_pred             hHHHHHHHHHHHhCCeeEEeeecccCcceEEEcChhhHHHhhhcCCccccCCcccccccc--ccCCcCeeecCCchHHHH
Q 047974           49 QLHDKVAQILEKTKGSFMIKGSWVAQYDMFLTSDPANVQHIMSTNFSKYHKGSEGRKRFD--IFGETGLFNSDFDEWKHQ  126 (497)
Q Consensus        49 ~~~~~~~~~~~k~g~v~~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~~~~~~~~~~~~--~~g~~~l~~~~~~~w~~~  126 (497)
                      +++.++..++ ++|||+++   ..   +.+++++++.+++++++.  .|+.++.+.....  ..+. +++..+|+.|+++
T Consensus        21 dp~~~~~~lr-~~~pv~~~---~~---g~~~v~~~~~v~~~l~d~--~fs~~~~~~~~~~~~~~~~-~l~~~dg~~h~~~   90 (394)
T 2wiy_A           21 NPYPWYRRLQ-QDHPVHKL---ED---GTYLVSRYADVSHFAKLP--IMSVEPGWADAGPWAVASD-TALGSDPPHHTVL   90 (394)
T ss_dssp             CCHHHHHHHH-HHCSEEEC---TT---SCEEECCHHHHHHHTTST--TEECHHHHHTCGGGGGGGG-SGGGCCTTHHHHH
T ss_pred             CccHHHHHHH-hcCCeEEe---cC---CeEEEcCHHHHHHHHcCC--Cccccccccccccchhccc-ccccCCchHHHHH
Confidence            3677777775 45899876   43   379999999999999764  4544332211111  1234 7888999999999


Q ss_pred             HHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCChHH
Q 047974          127 RKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLLKRTTFDFACLIATGHNPNSLSVGFPEMGFPD  206 (497)
Q Consensus       127 R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~~v~~~~~fG~~~~~~~~~~~~~~~~~  206 (497)
                      |+++++.|+++.++.+. +.+++. .+.+.+.+.    .++.+|+...+..++.++++..+||.+.+      ....+.+
T Consensus        91 R~~~~~~fs~~~~~~~~-~~i~~~-~~~l~~~~~----~~~~~d~~~~~~~~~~~vi~~~~~G~~~~------~~~~~~~  158 (394)
T 2wiy_A           91 RRQTNKWFTPKLVDGWV-RTTREL-VGDLLDGVE----AGQVIEARRDLAVVPTHVTMARVLQLPED------DADAVME  158 (394)
T ss_dssp             HHHHHTTCSHHHHHHHT-HHHHHH-HHHHHHTCC----TTCCEEHHHHHTHHHHHHHHHHHHTCCCC------CHHHHHH
T ss_pred             HHHHHhccCHHHHHHHH-HHHHHH-HHHHHHHHh----ccCCeeHHHHHHhhhHHHHHHHHcCCCHh------HHHHHHH
Confidence            99999999999998864 345544 344444433    34679999999999999999999997542      1112222


Q ss_pred             HHHHHHHHH-HHH--HHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccccccccchhhHHHHHhcCCCCCCCCCchHHHHH
Q 047974          207 AVDDACEAI-LIR--HLEKKLANGWRTIDQFWEKQKSMKQEEIEKGMEAKEDEGIYSLLNCYLSGHEVTGPTPAEKVMRD  283 (497)
Q Consensus       207 ~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~l~~~~i~~  283 (497)
                      .+....... ...  ....+..++...+.+++.+.|+++++           ...+|+++.+++...+  ..++++++.+
T Consensus       159 ~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~i~~rr~-----------~~~~dll~~Ll~~~~~--~~ls~~el~~  225 (394)
T 2wiy_A          159 AMFEAMLMQSAEPADGDVDRAAVAFGYLSARVAEMLEDKRV-----------NPGDGLADSLLDAARA--GEITESEAIA  225 (394)
T ss_dssp             HHHHHHGGGSSSCCTTHHHHHHHHHHHHHHHHHHHHHHHHH-----------SCCSSHHHHHHHHHHT--TSSCHHHHHH
T ss_pred             HHHHHHHhccCCccchHHHHHHHHHHHHHHHHHHHHHHhhc-----------CCCCcHHHHHHHhhhc--CCCCHHHHHH
Confidence            221111000 000  00233445667778888888877754           2235799988876432  2489999999


Q ss_pred             HHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhhcccCCCCCCCCCChhhhhcchhHHHHHHHhhcCCCCCCc
Q 047974          284 NITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRNFSQEGFNKPPLVRLNELNKLVYLHAALCETLRLYPPVPF  363 (497)
Q Consensus       284 ~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~  363 (497)
                      +++.+++||+|||+++++|++++|++||++|+++++|++                       |+++||+|+||++|+++.
T Consensus       226 ~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~e~~-----------------------~l~a~i~E~LRl~pp~~~  282 (394)
T 2wiy_A          226 TILVFYAVGHMAIGYLIASGIELFARRPEVFTAFRNDES-----------------------ARAAIINEMVRMDPPQLS  282 (394)
T ss_dssp             HHHHHHHHTTTHHHHHHHHHHHHHHHCHHHHHHHHHCGG-----------------------GHHHHHHHHHHHSCSBCE
T ss_pred             HHHHHHHhhhhhHHHHHHHHHHHHHHCHHHHHHHHhChH-----------------------hHHHHHHHHHhhCCCccC
Confidence            999999999999999999999999999999999999753                       789999999999999998


Q ss_pred             ccccccCCCcccCCeeeCCCcEEEEeccccccCCCCCCCCCCCCCCCCccCCCCCccCCCCCcccccCCCCCCCcchHHH
Q 047974          364 EIRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWGEDCREFKPERWITEDGRIRHEPPHKFFSFNAGPRICIGKDIA  443 (497)
Q Consensus       364 ~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A  443 (497)
                      ..|.+.+|.++ +||.||||+.|+++.+++||||++| +||++|||+||++.         ..++|||+|+|.|+|++||
T Consensus       283 ~~R~~~~d~~l-~G~~Ip~G~~V~~~~~~~~rdp~~~-~dP~~F~p~R~~~~---------~~~l~FG~G~r~C~G~~lA  351 (394)
T 2wiy_A          283 FLRFPTEDVEI-GGVLIEAGSPIRFMIGAANRDPEVF-DDPDVFDHTRPPAA---------SRNLSFGLGPHSCAGQIIS  351 (394)
T ss_dssp             EEEEESSCEEE-TTEEECTTCCEEEEHHHHTTCTTTS-SSTTSCCTTCCGGG---------SCCSTTCCGGGSCTTHHHH
T ss_pred             eeEEECCCEEE-cCeecCCCCEEEeChHhhcCCcccC-CCccccCCCCCCCC---------CCccCCCCCCCcCCcHHHH
Confidence            78888888777 9999999999999999999999999 99999999999742         3589999999999999999


Q ss_pred             HHHHHHHHHHHHhhce-EEeecCccceeeeeEEEeecCceEEEE
Q 047974          444 FTLMKATAASIIHNYD-VQVVKNHPVTYNLSIGFRMKHGLLARV  486 (497)
Q Consensus       444 ~~~~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  486 (497)
                      ++|++++++.|+++|+ +++.++.  ....+...+....++|++
T Consensus       352 ~~e~~~~l~~ll~~~~~~~l~~~~--~~~~~~~~~g~~~lpv~~  393 (394)
T 2wiy_A          352 RAEATTVFAVLAERYERIELAEEP--TVAHNDFARRYRKLPIVL  393 (394)
T ss_dssp             HHHHHHHHHHHHHHCSCEEESSCC--EECCCSSBCCEEECEEEE
T ss_pred             HHHHHHHHHHHHHhCCCceECCCC--cccccccccCcceeeEEe
Confidence            9999999999999998 9997632  233333445556777775


No 73 
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A*
Probab=100.00  E-value=2.6e-54  Score=413.99  Aligned_cols=367  Identities=16%  Similarity=0.162  Sum_probs=278.6

Q ss_pred             hHHHHHHHHHHHhCCeeEEeeecccCcceEEEcChhhHHHhhhcCCccccCCcccc---------ccccccCCcCeeecC
Q 047974           49 QLHDKVAQILEKTKGSFMIKGSWVAQYDMFLTSDPANVQHIMSTNFSKYHKGSEGR---------KRFDIFGETGLFNSD  119 (497)
Q Consensus        49 ~~~~~~~~~~~k~g~v~~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~~~~~~~~---------~~~~~~g~~~l~~~~  119 (497)
                      +++.+  ...++|||++.+   .+++.. ++|++++.|+++++++  .+.......         ......+. +++..+
T Consensus        34 ~P~~~--~~lr~~gpv~~~---~~g~~~-~vv~~~~~v~~vL~d~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~d  104 (416)
T 3p3o_A           34 FSWDS--PEVAEAREKSWI---ARTPLA-LLVLRYAEADQLARDK--RLISGFRGLVDMVGTPEGPVRDFMVD-FLQSLD  104 (416)
T ss_dssp             CCTTS--HHHHHHHHHCSE---EECSSS-EEECSHHHHHHHHHCT--TEECSHHHHHHHHTCCSSHHHHHHHH-SGGGCC
T ss_pred             CCchH--HHHHHhCCcccc---ccCCCc-eEEeCHHHHHHHHcCc--ccccCCccccccccccccchhhhhcC-ccccCC
Confidence            35556  455689999988   666666 9999999999999875  343322100         01122344 788899


Q ss_pred             CchHHHHHHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHH-HHHHHHHHHHhhcCCCCCCCCCC
Q 047974          120 FDEWKHQRKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLL-KRTTFDFACLIATGHNPNSLSVG  198 (497)
Q Consensus       120 ~~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~v~~~~~fG~~~~~~~~~  198 (497)
                      |+.|+++||+++++|+++.++.+. +.+++. .+.+.+.+ .   . +.+|+...+ ..++.++++. +||.+....   
T Consensus       105 g~~h~~~Rr~~~~~fs~~~l~~~~-~~i~~~-~~~ll~~l-~---~-g~~d~~~~~~~~~~~~vi~~-l~G~~~~~~---  173 (416)
T 3p3o_A          105 GADHRRLRGLATHPFTPRRITAVQ-PFVRST-VEQLIDKL-P---Q-GDFDFVQHFPHPLPALVMCQ-LLGFPLEDY---  173 (416)
T ss_dssp             HHHHHHHHHTTCGGGSHHHHHHHH-HHHHHH-HHHHHHTC-C---S-SSEEHHHHTTTHHHHHHHHH-HHTCCGGGH---
T ss_pred             chHHHHHHHHHHHhhCHHHHHHHH-HHHHHH-HHHHHHhh-c---c-CCccHHHHHHHHHHHHHHHH-HhCCCHHHH---
Confidence            999999999999999999999875 445555 44454444 2   2 348976655 5699999998 578754311   


Q ss_pred             CCCCChHHHHHHHHHHHH---HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccccccccchhhHHHHHhcCCCCCCCC
Q 047974          199 FPEMGFPDAVDDACEAIL---IRHLEKKLANGWRTIDQFWEKQKSMKQEEIEKGMEAKEDEGIYSLLNCYLSGHEVTGPT  275 (497)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~  275 (497)
                         ..+.+....+.....   .........++.+.+.+++.+.|+++++           ...+|+++.+++...++  .
T Consensus       174 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~rr~-----------~~~~dll~~ll~~~~~~--~  237 (416)
T 3p3o_A          174 ---DTVGRLSIETNLGLALSNDQDILVKVEQGLGRMFDYLVAAIEKRKV-----------EPGDDLTSDIVRAFHDG--V  237 (416)
T ss_dssp             ---HHHHHHHHTTCGGGTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------SCCSSHHHHHHHHHHTT--S
T ss_pred             ---HHHHHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHHHHHHHh-----------CCCccHHHHHHHhhccC--C
Confidence               112222111111000   0111455667888899999999988865           23578999999875432  6


Q ss_pred             CchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhhcccCCCCCCCCCChhhhhcchhHHHHHHHhh
Q 047974          276 PAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRNFSQEGFNKPPLVRLNELNKLVYLHAALCETL  355 (497)
Q Consensus       276 l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~l  355 (497)
                      ++++++..+++.+++||+|||+++++|++++|++||++|+++++|++                       |+++||+|+|
T Consensus       238 ls~~el~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~e~~-----------------------~l~a~i~E~l  294 (416)
T 3p3o_A          238 LDDYELRTLVATVLVAGYETTNHQLALAMYDFAQHPDQWMKIKENPE-----------------------LAPQAVEEVL  294 (416)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG-----------------------GHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHCHHHHHHHHhCHH-----------------------HHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999864                       7899999999


Q ss_pred             cCCCCC-CcccccccCCCcccCCeeeCCCcEEEEeccccccCCCCCCCCCCCCCCCCccCCCCCccCCCCCcccccCCCC
Q 047974          356 RLYPPV-PFEIRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWGEDCREFKPERWITEDGRIRHEPPHKFFSFNAGP  434 (497)
Q Consensus       356 Rl~p~~-~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~  434 (497)
                      |++|++ ....|.+.+|.++ +||.||||+.|+++.+++||||++| +||++|||+||.          ...++|||+|+
T Consensus       295 Rl~p~~~~~~~R~~~~d~~l-~G~~Ip~G~~V~~~~~~~~rdp~~~-~dp~~F~p~R~~----------~~~~l~FG~G~  362 (416)
T 3p3o_A          295 RWSPTLPVTATRVAAEDFEV-NGVRIPTGTPVFMCAHVAHRDPRVF-ADADRFDITVKR----------EAPSIAFGGGP  362 (416)
T ss_dssp             HHSCSCSSCCEEEESSCEEE-TTEEECTTCEEEECHHHHTTCTTTC-TTTTSCCTTCCC----------SSCCCTTCCST
T ss_pred             hhccccccCcceEeCCCeEE-CCEEECCCCEEEEChHHhcCChhcc-CCccccCCCCCC----------CCCeecCCCCC
Confidence            999999 4566777777666 9999999999999999999999999 999999999973          23589999999


Q ss_pred             CCCcchHHHHHHHHHHHHHHHhhce-EEeecCccceeeeeEEEeecCceEEEEEe
Q 047974          435 RICIGKDIAFTLMKATAASIIHNYD-VQVVKNHPVTYNLSIGFRMKHGLLARVSK  488 (497)
Q Consensus       435 r~C~G~~~A~~~~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  488 (497)
                      |.|+|++||++|++++++.|+++|+ +++.++.  ........+....++|++.|
T Consensus       363 r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~--~~~~~~~~~g~~~lpv~~~p  415 (416)
T 3p3o_A          363 HFCLGTALARLELTEAVAALATRLDPPQIAGEI--TWRHELGVAGPDALPLRFGA  415 (416)
T ss_dssp             TSCTTHHHHHHHHHHHHHHHHHHSCCEEECSCC--EECCCTTCCCEEECEEEESC
T ss_pred             ccCcCHHHHHHHHHHHHHHHHHhCCccccCCCC--ceecCCCccCcceeeEEEec
Confidence            9999999999999999999999994 8887543  33333444555678888864


No 74 
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A*
Probab=100.00  E-value=1.1e-54  Score=406.02  Aligned_cols=320  Identities=14%  Similarity=0.159  Sum_probs=244.9

Q ss_pred             HHhCCeeEEeeecccCcceEEEcChhhHHHhhhcCCccccCCccccccccccCCcCeeecCCchHHHHHHhhhcccCHHH
Q 047974           59 EKTKGSFMIKGSWVAQYDMFLTSDPANVQHIMSTNFSKYHKGSEGRKRFDIFGETGLFNSDFDEWKHQRKLARAFINHQK  138 (497)
Q Consensus        59 ~k~g~v~~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~w~~~R~~~~~~f~~~~  138 (497)
                      ++||||+++        +.++++||+.+++++.++ ..|.+++....... .|. +++..+|+.|+++|++++++|++++
T Consensus         2 r~~gpv~~~--------g~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~-~~~-~l~~~~g~~~~~~R~~~~~~fs~~~   70 (343)
T 2rfb_A            2 RLNDPVHYD--------GAWHVYKYSDVKHVLMND-KIFSSNPGNRYSNA-GGI-SFITMDNPEHKEFRDISAPYFLPSK   70 (343)
T ss_dssp             -CCCCEEET--------TEEEECSHHHHHHHHHCT-TTEESSCSSCCC----CC-GGGGCCHHHHHHHHHHHHHHHSHHH
T ss_pred             CCcCCeeee--------CeEEEcCHHHHHHHHhCh-hhcccCCcCCCCCc-ccc-ccccCCchHHHHHHHHhhhhcCHHH
Confidence            689998743        389999999999999876 46877652111112 244 7888899999999999999999999


Q ss_pred             HHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHH-HHHHHHHHHHhhcCCCCCCCCCCCCCCChHHHHHHHHHHHHH
Q 047974          139 FQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLL-KRTTFDFACLIATGHNPNSLSVGFPEMGFPDAVDDACEAILI  217 (497)
Q Consensus       139 l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~-~~~~~~v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (497)
                      ++.+. +.+++. .+.+.+.+.       .+|+.+.+ ..+++++++.+ ||.+.+.      ...+.+....+......
T Consensus        71 l~~~~-~~i~~~-~~~l~~~l~-------~~d~~~~~~~~~~~~vi~~~-~G~~~~~------~~~~~~~~~~~~~~~~p  134 (343)
T 2rfb_A           71 INDYK-DFIEET-SNDLIKNID-------NKDIISEYAVRLPVNIISKI-LGIPDSD------MPLFKLWSDYIIGNKRD  134 (343)
T ss_dssp             HGGGH-HHHHHH-HHHHHTTCT-------TSCHHHHTTTHHHHHHHHHH-HTCCGGG------HHHHHHHHHHHHTSCCS
T ss_pred             HHHHH-HHHHHH-HHHHHHhcc-------ccCHHHHHhhhhhHHHHHHH-cCCCHHH------HHHHHHHHHHHhhccCc
Confidence            98764 345444 344444332       68998865 89999999998 9976531      11232322222110000


Q ss_pred             HH-HHHHHHhHHHHHHHHHHHHHHHHHHHHHhccccccccchhhHHHHHhcCCCCCCCCCchHHHHHHHHHHHHhcCcch
Q 047974          218 RH-LEKKLANGWRTIDQFWEKQKSMKQEEIEKGMEAKEDEGIYSLLNCYLSGHEVTGPTPAEKVMRDNITALIFATEGTT  296 (497)
Q Consensus       218 ~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt  296 (497)
                      .+ ..++. ++.+.+.+++.+.+                  .+| ++.+++...+ +..++++++..++..+++||+|||
T Consensus       135 ~~~~~~~~-~~~~~~~~~~~~~i------------------~~d-l~~ll~~~~~-~~~l~~~ei~~~~~~~~~AG~dTt  193 (343)
T 2rfb_A          135 ENFNYVNN-RMVSRLLEIFKSDS------------------HGI-INVLAGSSLK-NRKLTMDEKIKYIMLLIIGGNETT  193 (343)
T ss_dssp             SHHHHHHH-HHHHHHHHHHHSCC------------------SSH-HHHHHTCBCS-SSBCCHHHHHHHHHHHHHHHHHHH
T ss_pred             chhhHHHH-HHHHHHHHHHHHHH------------------hcc-HHHHHhhhcC-CCCCCHHHHHHHHHHHHHHhhHHH
Confidence            00 01122 33334444433332                  246 8888876432 456899999999999999999999


Q ss_pred             HHHHHHHHHHHhcChHHHHHHHHHHHhhcccCCCCCCCCCChhhhhcchhHHHHHHHhhcCCCCC-CcccccccCCCccc
Q 047974          297 SIALTWFFWLVSKNPFAETKIREELKRNFSQEGFNKPPLVRLNELNKLVYLHAALCETLRLYPPV-PFEIRIPLQPDVLP  375 (497)
Q Consensus       297 ~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~-~~~~r~~~~~~~~~  375 (497)
                      +++++|++++|++||++|+++++|+                          +|||+|+||++|++ +...|.+.+|.++ 
T Consensus       194 ~~~l~~~l~~L~~~P~~~~~l~~E~--------------------------~a~i~E~lRl~p~~~~~~~R~~~~d~~~-  246 (343)
T 2rfb_A          194 TNLIGNMIRVIDENPDIIDDALKNR--------------------------SGFVEETLRYYSPIQFLPHRFAAEDSYI-  246 (343)
T ss_dssp             HHHHHHHHHHHHHCGGGHHHHHHCH--------------------------HHHHHHHHHHSCSBCCBCCCEESSCEEE-
T ss_pred             HHHHHHHHHHHHhCHHHHHHHHcCc--------------------------HHHHHHHHhhCcccccccceEECCCeEE-
Confidence            9999999999999999999999985                          59999999999999 9778888877666 


Q ss_pred             CCeeeCCCcEEEEeccccccCCCCCCCCCCCCCCCCccCCCCCccCCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHH
Q 047974          376 SGHQVNQNTHVLISAYSMARMTSVWGEDCREFKPERWITEDGRIRHEPPHKFFSFNAGPRICIGKDIAFTLMKATAASII  455 (497)
Q Consensus       376 ~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll  455 (497)
                      +||.||||+.|+++.+++||||++| +||++|+|||+            ..++|||+|+|.|+|++||++|++++++.|+
T Consensus       247 ~g~~Ip~Gt~V~~~~~~~~rd~~~~-~dp~~F~PeR~------------~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll  313 (343)
T 2rfb_A          247 NNKKIKKGDQVIVYLGSANRDETFF-DEPDLFKIGRR------------EMHLAFGIGIHMCLGAPLARLEASIALNDIL  313 (343)
T ss_dssp             TTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTCS------------SCCCTTCCSTTSCTTHHHHHHHHHHHHHHHH
T ss_pred             CCEEECCCCEEEEChhhhCCCcccC-CCccccCCCCC------------CCCccCCCCCccCCChHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999 99999999994            2589999999999999999999999999999


Q ss_pred             hhce-EEeecCc
Q 047974          456 HNYD-VQVVKNH  466 (497)
Q Consensus       456 ~~f~-~~~~~~~  466 (497)
                      ++|+ +++.++.
T Consensus       314 ~~f~~~~~~~~~  325 (343)
T 2rfb_A          314 NHFKRIKIDYKK  325 (343)
T ss_dssp             HHCSCCCBCTTT
T ss_pred             HhCCCceeCCCc
Confidence            9996 9998743


No 75 
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A*
Probab=100.00  E-value=9.3e-53  Score=402.06  Aligned_cols=384  Identities=12%  Similarity=0.105  Sum_probs=273.0

Q ss_pred             CCcccchh---hHHHHhhccchHHHHHHHHHHHhCCeeEEeeecccCcceEEEcChhhHHHhhhcCCccccCCcccc--c
Q 047974           31 PWNLPLLG---MLASVILNINQLHDKVAQILEKTKGSFMIKGSWVAQYDMFLTSDPANVQHIMSTNFSKYHKGSEGR--K  105 (497)
Q Consensus        31 p~~~P~~G---~~~~~~~~~~~~~~~~~~~~~k~g~v~~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~~~~~~~~--~  105 (497)
                      +.++|.+|   ....+..+   ++.++.++ +++|||+.+     ++.+.++|++++.|++++++. ..|+......  .
T Consensus        17 ~~~~P~~~~dp~~~~~~~d---P~~~~~~l-R~~gPV~~~-----~~~~~~~vt~~~~v~~vl~d~-~~fs~~~~~~~~~   86 (412)
T 4dnj_A           17 GAGVPHLGIDPFALDYFAD---PYPEQETL-REAGPVVYL-----DKWNVYGVARYAEVYAVLNDP-LTFCSSRGVGLSD   86 (412)
T ss_dssp             STTSCEECCCTTSHHHHHS---CHHHHHHH-HHHCSSEEE-----TTTTEEEECSHHHHHHHHTCT-TTEESTTCSSSSC
T ss_pred             CCCCCccCCCCCCHHHHhC---cHHHHHHH-HhcCCEEEE-----CCCCEEEECCHHHHHHHHcCC-ccccCCCcccccc
Confidence            34678887   34566555   67777776 467999755     556899999999999999875 4554432211  1


Q ss_pred             c---ccccCCcCeeecCCchHHHHHHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHH-HHHHHHHHH
Q 047974          106 R---FDIFGETGLFNSDFDEWKHQRKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQ-DLLKRTTFD  181 (497)
Q Consensus       106 ~---~~~~g~~~l~~~~~~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~-~~~~~~~~~  181 (497)
                      .   ....+...++.+||+.|+++||+++++|++++++++.+ .+++. .+.+.+.+..   .++.+|+. ++...+..+
T Consensus        87 ~~~~~~~~~~~~~~~~Dg~~H~r~R~~~~~~Fs~~~l~~~~~-~i~~~-~~~l~~~~~~---~~~~~D~v~~~~~~~~~~  161 (412)
T 4dnj_A           87 FKKEKPWRPPSLILEADPPAHTRTRAVLSKVLSPATMKRLRD-GFAAA-ADAKIDELLA---RGGNIDAIADLAEAYPLS  161 (412)
T ss_dssp             TTTSCCSSCCCTTTTCCTTHHHHHHHHHHHHTCHHHHHHHHH-HHHHH-HHHHHHHHHH---TTSEEETCCCCCCHHHHH
T ss_pred             ccccccccCCCccccCChHHHHHHHhhcccccCHHHHHHhhH-HHHHH-HHHHHHhhhc---cCCCceeHHHHHhhhhHh
Confidence            1   11222225778999999999999999999999998754 45555 3444444332   34566653 455667777


Q ss_pred             HHHHhhcCCCCCCCCCCCCCCChHHHHHHHHHHHHH-HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccccccccchhh
Q 047974          182 FACLIATGHNPNSLSVGFPEMGFPDAVDDACEAILI-RHLEKKLANGWRTIDQFWEKQKSMKQEEIEKGMEAKEDEGIYS  260 (497)
Q Consensus       182 v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~d  260 (497)
                      +++.++ |....      ....+......+...... .............+..+..+    ..+..         ....+
T Consensus       162 ~i~~l~-g~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~---------~~~~~  221 (412)
T 4dnj_A          162 VFPDAM-GLKQE------GRENLLPYAGLVFNAFGPPNELRQSAIERSAPHQAYVAE----QCQRP---------NLAPG  221 (412)
T ss_dssp             HHHHHH-TCCST------TGGGHHHHHHHHHHHTSCSSHHHHHHHHTCHHHHHHHHH----HTSGG---------GSCTT
T ss_pred             HHHHHc-CCchh------hhhhhhhhhhcccccccccHHHHHHHHHHHHHHHHHHHH----HHHhh---------ccccc
Confidence            887755 54332      112232222222211100 00011111112222222222    11111         12234


Q ss_pred             HHHHHhcCCCCCCCCCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhhcccCCCCCCCCCChhh
Q 047974          261 LLNCYLSGHEVTGPTPAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRNFSQEGFNKPPLVRLNE  340 (497)
Q Consensus       261 ll~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~  340 (497)
                      .+..++.... ++..++++++..++..+++||+|||+++++|++++|++||++|++|++|..                  
T Consensus       222 ~~~~l~~~~~-~~~~l~~~e~~~~~~~l~~AG~eTTa~~l~~~~~~L~~~P~~~~~Lr~~~~------------------  282 (412)
T 4dnj_A          222 GFGACIHAFS-DTGEITPEEAPLLVRSLLSAGLDTTVNGIAAAVYCLARFPDEFARLRADPS------------------  282 (412)
T ss_dssp             SHHHHHHHTT-TTTSSCTTHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHCHHHHHHHHHCGG------------------
T ss_pred             cchhhhHhhh-hccchhHHHHHHHHHHHHhccchhHHHHHHHHHHHHhhCHHHHHHHHhCcc------------------
Confidence            4444544433 235689999999999999999999999999999999999999999998633                  


Q ss_pred             hhcchhHHHHHHHhhcCCCCCCcccccccCCCcccCCeeeCCCcEEEEeccccccCCCCCCCCCCCCCCCCccCCCCCcc
Q 047974          341 LNKLVYLHAALCETLRLYPPVPFEIRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWGEDCREFKPERWITEDGRIR  420 (497)
Q Consensus       341 l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~  420 (497)
                           |+.++++|++|++|+++...|.+.+|.++ +||.||||+.|+++.+++||||++| +||++|+||||.       
T Consensus       283 -----~~~~~~eE~lR~~pp~~~~~R~a~~d~~l-~G~~Ip~G~~V~~~~~a~~rDp~~f-~dP~~F~PeR~~-------  348 (412)
T 4dnj_A          283 -----LARNAFEEAVRFESPVQTFFRTTTRDVEL-AGATIGEGEKVLMFLGSANRDPRRW-DDPDRYDITRKT-------  348 (412)
T ss_dssp             -----GHHHHHHHHHHHHCSBCEEEEEESSCEEE-TTEEECTTCEEEEEHHHHTTCTTTS-SSTTSCCTTSCC-------
T ss_pred             -----ccccccceeeeecCCcccccccCCCCeEE-CCccCCCCCeEEeehhhccCChhhC-CCccccCCCCCC-------
Confidence                 67899999999999999999999988777 9999999999999999999999999 999999999963       


Q ss_pred             CCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhc-eEEeecCccceeeeeEEEeecCceEEEEEe
Q 047974          421 HEPPHKFFSFNAGPRICIGKDIAFTLMKATAASIIHNY-DVQVVKNHPVTYNLSIGFRMKHGLLARVSK  488 (497)
Q Consensus       421 ~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  488 (497)
                          ..|+|||+|+|.|+|++||++|++++++.|+++| ++++.++  .....+.++++...++|+++|
T Consensus       349 ----~~~lpFG~G~r~CiG~~lA~~E~~~~l~~Ll~rf~~~~l~~~--~~~~~~~~~rg~~~LpV~~tP  411 (412)
T 4dnj_A          349 ----SGHVGFGSGVHMCVGQLVARLEGEVVLAALARKVAAIEIAGP--LKRRFNNTLRGLESLPIQLTP  411 (412)
T ss_dssp             ----TTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHEEEEEECSC--CEEEECSSBEEEEECEEEEEE
T ss_pred             ----CCCCCcCCCCcCChhHHHHHHHHHHHHHHHHHHCCCCeECCC--CeeecCCCccCCcceeEEEEe
Confidence                3589999999999999999999999999999999 8999764  334455566777889999987


No 76 
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A*
Probab=100.00  E-value=1.4e-48  Score=372.10  Aligned_cols=371  Identities=12%  Similarity=0.067  Sum_probs=264.5

Q ss_pred             hHHHHHHHHHHHhCC-eeEEeeecccCcceEEEcChhhHHHhhhcCCccccCCccccccc-cccCCcCeeecCCchHHHH
Q 047974           49 QLHDKVAQILEKTKG-SFMIKGSWVAQYDMFLTSDPANVQHIMSTNFSKYHKGSEGRKRF-DIFGETGLFNSDFDEWKHQ  126 (497)
Q Consensus        49 ~~~~~~~~~~~k~g~-v~~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~~~~~~~~~~~-~~~g~~~l~~~~~~~w~~~  126 (497)
                      +++..+..++++.++ ++..   ..+ -+.++|++++.|++|+++. ..|++........ ...+...+..+|+++|+++
T Consensus        38 ~~~~~~~~lr~~~~~~~~~~---~~~-gg~W~vtr~~dv~~vl~d~-~~fs~~~~~~~~~~~~~~~~~~~~~D~p~H~r~  112 (417)
T 4dxy_A           38 GYHEAWKKVQHPGIPDLIWT---PFT-GGHWIATNGDTVKEVYSDP-TRFSSEVIFLPKEAGEKAQMVPTKMDPPEHTPY  112 (417)
T ss_dssp             CHHHHHHHHSCTTCCSEEEE---SST-TSEEEECSHHHHHHHHTCT-TTEESSCCSSSTTSSCSSCTTTTTCCTTTHHHH
T ss_pred             ChHHHHHHHHhhCCCCEEec---CCC-CCEEEECCHHHHHHHHcCc-hhccCCCcccccccccccccCcccCCcHHHHHH
Confidence            466677776554333 4443   222 2678999999999999875 5676654332221 2222224556899999999


Q ss_pred             HHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHHHH-HHHHHHHHhhcCCCCCCCCCCCCCCChH
Q 047974          127 RKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLLKR-TTFDFACLIATGHNPNSLSVGFPEMGFP  205 (497)
Q Consensus       127 R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~~~-~~~~v~~~~~fG~~~~~~~~~~~~~~~~  205 (497)
                      ||+++++|++++++++. +.+++. .+.+++.+..    ++.+|+...+.. +...+++. ++|.....      ...+.
T Consensus       113 Rrll~~~Fs~~~l~~~~-~~i~~~-~~~lld~l~~----~g~~D~v~~~a~~l~~~vi~~-llg~~~~d------~~~~~  179 (417)
T 4dxy_A          113 RKALDKGLNLAKIRKVE-DKVREV-ASSLIDSFAA----RGECDFAAEYAELFPVHVFMA-LADLPLED------IPVLS  179 (417)
T ss_dssp             HHHHHHHHCHHHHHTTH-HHHHHH-HHHHHHHHHT----TSEEEHHHHTTTTHHHHHHHH-HTTCCGGG------HHHHH
T ss_pred             HHHhhhhcCHHHHHHHH-HHHHHH-HHHHHHHhhh----cCCeeeHHHHHhhhHHHHHHH-HcCCCHHH------HHHHH
Confidence            99999999999999875 445555 4444444432    356787666644 55555554 56764321      11122


Q ss_pred             HHHHHHHHHHH--HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccccccccchhhHHHHHhcCCCCCCCCCchHHHHH
Q 047974          206 DAVDDACEAIL--IRHLEKKLANGWRTIDQFWEKQKSMKQEEIEKGMEAKEDEGIYSLLNCYLSGHEVTGPTPAEKVMRD  283 (497)
Q Consensus       206 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~l~~~~i~~  283 (497)
                      +....+.....  .........++...+..++.++++++++           ...+|+++.|+.... ++..++++++.+
T Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~rr~-----------~~~ddl~s~L~~~~~-~~~~~~~~e~~~  247 (417)
T 4dxy_A          180 EYARQMTRPEGNTPEEMATDLEAGNNGFYAYVDPIIRARVG-----------GDGDDLITLMVNSEI-NGERIAHDKAQG  247 (417)
T ss_dssp             HHHHHHHSCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----------CCCCSHHHHHHTCEE-TTEECCHHHHHH
T ss_pred             hhhhhhccccccChHHHHHHHHHHHHHHHHHHHHHHHHHhc-----------CCccchhhhhccccc-cCCccchhHHHH
Confidence            22221111000  0011344556677788888888877653           345789998887654 345689999999


Q ss_pred             HHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhhcccCCCCCCCCCChhhhhcchhHHHHHHHhhcCCCCCCc
Q 047974          284 NITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRNFSQEGFNKPPLVRLNELNKLVYLHAALCETLRLYPPVPF  363 (497)
Q Consensus       284 ~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~  363 (497)
                      ++..+++||+|||+++++|++++|++||++++++++|...+.                       .++ |.+|++++.+.
T Consensus       248 ~~~~ll~AG~eTTa~~l~~~~~~L~~~P~~~~~l~~e~~~~~-----------------------~av-ee~~~~~~~~~  303 (417)
T 4dxy_A          248 LISLLLLGGLDTVVNFLSFFMIHLARHPELVAELRSDPLKLM-----------------------RGA-EEMFRRFPVVS  303 (417)
T ss_dssp             HHHHHHHHTTHHHHHHHHHHHHHHHTCHHHHHHHHHCHHHHH-----------------------HTH-HHHHHHSCCBE
T ss_pred             HHHHHHhhcccchhhHHHHHHHHHHhCchhhhhhccCccccc-----------------------cce-eeeeccccccc
Confidence            999999999999999999999999999999999999877542                       233 44444556666


Q ss_pred             ccccccCCCcccCCeeeCCCcEEEEeccccccCCCCCCCCCCCCCCCCccCCCCCccCCCCCcccccCCCCCCCcchHHH
Q 047974          364 EIRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWGEDCREFKPERWITEDGRIRHEPPHKFFSFNAGPRICIGKDIA  443 (497)
Q Consensus       364 ~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A  443 (497)
                      ..|.+++|.++ +|+.||+|+.|+++.+++||||++| +||++|||+|+           +..|+|||+|+|.|+|++||
T Consensus       304 ~~R~a~~d~~l-~G~~Ip~G~~V~~~~~a~~rDp~~f-~dP~~FdpeR~-----------~~~~l~FG~G~r~ClG~~LA  370 (417)
T 4dxy_A          304 EARMVAKDQEY-KGVFLKRGDMILLPTALHGLDDAAN-PEPWKLDFSRR-----------SISHSTFGGGPHRCAGMHLA  370 (417)
T ss_dssp             EEEEECSCEEE-TTEEECTTCEEEEETHHHHTCTTTS-SSTTSCCTTCS-----------CCCCCTTCCGGGSCTTHHHH
T ss_pred             cccccccceEe-cCccccCCCEEEEeehhhcCChhhC-CCccccCCCCC-----------CCCCCCcCCCcccCccHHHH
Confidence            77888887776 9999999999999999999999999 99999999992           45689999999999999999


Q ss_pred             HHHHHHHHHHHHhhc-eEEeecCccceeeeeEEEeecCceEEEEE
Q 047974          444 FTLMKATAASIIHNY-DVQVVKNHPVTYNLSIGFRMKHGLLARVS  487 (497)
Q Consensus       444 ~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  487 (497)
                      ++|++++++.|+++| ++++.+++.. ...+...+....++|++-
T Consensus       371 ~~E~~i~l~~Ll~rfp~~~l~~~~~~-~~~~~~~~g~~~LPv~~~  414 (417)
T 4dxy_A          371 RMEVIVTLEEWLKRIPEFSFKEGETP-IYHSGIVAAVENVPLVWP  414 (417)
T ss_dssp             HHHHHHHHHHHHHHCSSCEECTTCCC-EEECSSBCEEECCEEECC
T ss_pred             HHHHHHHHHHHHHhCCCceeCCCCCe-eecCCcccCceeeeEEee
Confidence            999999999999999 9999865433 233333444557888873


No 77 
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00  E-value=1.7e-47  Score=356.05  Aligned_cols=333  Identities=14%  Similarity=0.133  Sum_probs=219.6

Q ss_pred             cCCC-CCcccchhhHHHHhh--ccchHHHHHHHHHHHhCCeeEEeeecccCcceEEEcChhhHHHhhhcCCccccCCccc
Q 047974           27 INPT-PWNLPLLGMLASVIL--NINQLHDKVAQILEKTKGSFMIKGSWVAQYDMFLTSDPANVQHIMSTNFSKYHKGSEG  103 (497)
Q Consensus        27 ~ppg-p~~~P~~G~~~~~~~--~~~~~~~~~~~~~~k~g~v~~~~~~~~~~~~~v~v~~p~~v~~il~~~~~~~~~~~~~  103 (497)
                      +||| +++||++|+..++..  ...+++.++.+++++  ||++.   .   .+.+++++++.+++|+.+.  .|.+++..
T Consensus        35 ~ppG~~~~~P~~G~~~~~~~~~~~~dp~~~~~~lr~~--pV~~~---~---~~~~vv~~~~~v~~vl~d~--~f~~~~~~  104 (381)
T 2yjn_B           35 MIRGLHWGYGSNGDPYPMLLCGHDDDPQRRYRSMRES--GVRRS---R---TETWVVADHATARQVLDDP--AFTRATGR  104 (381)
T ss_dssp             HHHHHHHHHHHHTCHHHHHHHTCCSCCHHHHHHHHHH--CEEEC---S---SSCEEECSHHHHHHHHHCS--SEESSCCC
T ss_pred             CCCcccccccccCCchhhcCchhccCchHHHHHHHhC--CceeC---C---CCEEEEcCHHHHHHHHcCC--CcCCCccc
Confidence            6777 457899998766532  123578888888765  88865   3   3789999999999999863  57665431


Q ss_pred             c--c------cccccCCcCeeecCCchHHHHHHhhhcccCHHHHHHHHHHHhHHHHHhhHHHHhhhhcCCCceeeHHHHH
Q 047974          104 R--K------RFDIFGETGLFNSDFDEWKHQRKLARAFINHQKFQQLMAKIVPEMIERGLIPVLDHVSEEKMLVDFQDLL  175 (497)
Q Consensus       104 ~--~------~~~~~g~~~l~~~~~~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vdl~~~~  175 (497)
                      .  .      ....++. +++..|++.|       +++|+  .     .+.+++. .+.+++.+.      +.+|+...+
T Consensus       105 ~~~~~~~~~~~~~~~~~-~l~~~dg~~H-------~~~Ft--~-----~~~i~~~-~~~ll~~~~------g~~Dl~~~~  162 (381)
T 2yjn_B          105 TPEWMRAAGAPPAEWAQ-PFRDVHAASW-------EGEVP--D-----VGELAES-FAGLLPGAG------ARLDLVGDF  162 (381)
T ss_dssp             CCHHHHHHTCCHHHHTH-HHHHHHHCCC-------CSCCC--C-----CSCHHHH-TSTTSCC------------CCCCC
T ss_pred             ccccccccccccchhhh-hhhhCCchhh-------hhccC--C-----hHHHHHH-HHHHHHhcc------CcchHHHHH
Confidence            1  0      0111244 6777899999       67787  1     2334444 344444432      357888665


Q ss_pred             -HHHHHHHHHHhhcCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhcccccc
Q 047974          176 -KRTTFDFACLIATGHNPNSLSVGFPEMGFPDAVDDACEAILIRHLEKKLANGWRTIDQFWEKQKSMKQEEIEKGMEAKE  254 (497)
Q Consensus       176 -~~~~~~v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  254 (497)
                       ..+++++++.+ ||.+.+..          +....+...     +....          .....+              
T Consensus       163 a~~l~~~vi~~l-~G~~~~~~----------~~~~~~~~~-----~~~~~----------~~~~~~--------------  202 (381)
T 2yjn_B          163 AWQVPVQGMTAV-LGAAGVLR----------GAAWDARVS-----LDAQL----------SPQQLA--------------  202 (381)
T ss_dssp             CTHHHHHHHHTC------CCH----------HHHHHHTTH-----HHHTT----------SCCCHH--------------
T ss_pred             HHHHHHHHHHHH-cCCCHHHH----------HHHHHHHHh-----ccCCC----------CHHHHH--------------
Confidence             69999999995 99865311          111111000     00000          000000              


Q ss_pred             ccchhhHHHHHhcCCCCCCCCCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhhcccCCCCCCC
Q 047974          255 DEGIYSLLNCYLSGHEVTGPTPAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRNFSQEGFNKPP  334 (497)
Q Consensus       255 ~~~~~dll~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~  334 (497)
                        ...+.+..++.               ++++.+++||+|||+.+++|++++|++||++++++++|++            
T Consensus       203 --~~~~~~~~l~~---------------~~~~~ll~aG~eTt~~~l~~~l~~L~~~P~~~~~l~~e~~------------  253 (381)
T 2yjn_B          203 --VTEAAVAALPA---------------DPALRALFAGAEMTANTVVDAVLAVSAEPGLAERIADDPA------------  253 (381)
T ss_dssp             --HHHHHHHHCC-----------------CHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCC------------
T ss_pred             --HHHHHHHHHHH---------------HHHHHHHHHhhhHHHHHHHHHHHHHHHCHHHHHHHhhCHH------------
Confidence              00111111111               5678899999999999999999999999999999999743            


Q ss_pred             CCChhhhhcchhHHHHHHHhhcCCCCCCcccccccCCCcccCCeeeCCCcEEEEeccccccCCCCCCCCCCCCCCCCccC
Q 047974          335 LVRLNELNKLVYLHAALCETLRLYPPVPFEIRIPLQPDVLPSGHQVNQNTHVLISAYSMARMTSVWGEDCREFKPERWIT  414 (497)
Q Consensus       335 ~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~  414 (497)
                                 |++++|+|+||++|+++...|.+.+|.++ +|+.||||+.|+++.+++|+||++| +||++|||+||++
T Consensus       254 -----------~l~~~i~E~LR~~pp~~~~~R~a~~d~~l-~G~~Ip~G~~V~~~~~~~~rDp~~~-~dp~~F~p~R~~~  320 (381)
T 2yjn_B          254 -----------AAQRTVAEVLRLHPALHLERRTATAEVRL-GEHVIGEGEEVVVVVAAANRDPEVF-AEPDRLDVDRPDA  320 (381)
T ss_dssp             -------------HHHHHHHHHHSCSCSEEEEEESSCEES-SSCEECTTCEEEEEHHHHTTCTTTS-SSTTSCCSSCSCC
T ss_pred             -----------HHHHHhCeeeeecCCCcceeEEECCCeEE-CCEEECCCCEEEeCHHHHcCCcccC-CCccccCCCCCCC
Confidence                       88999999999999999877888877666 9999999999999999999999999 9999999999963


Q ss_pred             CCCCccCCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhc-eEEeecCccceeeeeEEEeecCceEEE
Q 047974          415 EDGRIRHEPPHKFFSFNAGPRICIGKDIAFTLMKATAASIIHNY-DVQVVKNHPVTYNLSIGFRMKHGLLAR  485 (497)
Q Consensus       415 ~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~  485 (497)
                                ..++|||+| |.|+|++||++|++++++.|+++| ++++.++. .....+.+.+....++|+
T Consensus       321 ----------~~~l~FG~G-h~C~G~~lA~~e~~~~l~~ll~~~p~~~l~~~~-~~~~~~~~~r~~~~LpV~  380 (381)
T 2yjn_B          321 ----------DRALSAHRG-HPGRLEELVTALATAALRAAAKALPGLTPSGPV-VRRRRSPVLRGTNRCPVE  380 (381)
T ss_dssp             ----------CCCCC-----CCSSHHHHHHHHHHHHHHHTTTTCCC-----CC-EECTTCSSSCCEEECCCC
T ss_pred             ----------CCccCCCCC-CCCchHHHHHHHHHHHHHHHHHhCCCcEECCCC-cccccCcccCCCccceee
Confidence                      368999999 999999999999999999999999 99997654 333333344444445543


No 78 
>1m46_B IQ4, IQ4 motif from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle protein; 2.10A {Saccharomyces cerevisiae}
Probab=29.30  E-value=43  Score=15.86  Aligned_cols=12  Identities=50%  Similarity=0.637  Sum_probs=9.7

Q ss_pred             HHHHHHHHHHHh
Q 047974          312 FAETKIREELKR  323 (497)
Q Consensus       312 ~~~~~l~~Ei~~  323 (497)
                      .+|.++|.|+..
T Consensus         8 nlqkkirkelkq   19 (26)
T 1m46_B            8 NLQKKIRKELKQ   19 (26)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            478899999875


No 79 
>4fu3_A Regulation of nuclear PRE-mRNA domain-containing 1B; structural genomics consortium, SGC, domain swapping, transc; HET: MSE; 1.90A {Homo sapiens} PDB: 4fld_A*
Probab=23.12  E-value=1.6e+02  Score=21.83  Aligned_cols=71  Identities=11%  Similarity=0.153  Sum_probs=43.6

Q ss_pred             CCCchHHHHHHHHHHHHhcCcchHHHHHHHHHHHhcChHHHHHHHHHHHhhcccCCCCCCCCCChhhhhcchhHHHHHHH
Q 047974          274 PTPAEKVMRDNITALIFATEGTTSIALTWFFWLVSKNPFAETKIREELKRNFSQEGFNKPPLVRLNELNKLVYLHAALCE  353 (497)
Q Consensus       274 ~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~l~~lp~l~a~i~E  353 (497)
                      ..++++.+...+-.+ -...+....+..|++.+.-...++.+-+.+++...-           ....+.-+=+++.+++.
T Consensus         2 ssf~~~~l~~~L~~L-~~s~~sI~~~s~w~l~~~~~a~~iv~~i~~~l~~~~-----------~~~KL~~LYLindIl~n   69 (135)
T 4fu3_A            2 SSFSESALEKKLSEL-SNSQQSVQTLSLWLIHHRKHAGPIVSVWHRELRKAK-----------SNRKLTFLYLANDVIQN   69 (135)
T ss_dssp             -CCCHHHHHHHHHHC-CSSTTHHHHHHHHHHHTGGGHHHHHHHHHHHHHHSC-----------TTTHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHc-cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----------cchhHHHHHHHHHHHHH
Confidence            346666666655543 356667777778888887777777777777766432           12234445557777776


Q ss_pred             hhc
Q 047974          354 TLR  356 (497)
Q Consensus       354 ~lR  356 (497)
                      +-|
T Consensus        70 s~~   72 (135)
T 4fu3_A           70 SKR   72 (135)
T ss_dssp             HTT
T ss_pred             HHh
Confidence            644


No 80 
>3lqv_A PRE-mRNA branch site protein P14; cysless mutant, PRE-mRNA splicing, adenine, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: ADE; 2.38A {Homo sapiens} SCOP: d.58.7.1 PDB: 2f9d_A 2f9j_A 2fho_B
Probab=22.32  E-value=68  Score=22.86  Aligned_cols=60  Identities=12%  Similarity=0.066  Sum_probs=39.0

Q ss_pred             cCCCCCcccchhhHHHHhhccchHHHHHHHHHHHhCCeeEEeeecc---cCcceEEEcChhhHHHhhh
Q 047974           27 INPTPWNLPLLGMLASVILNINQLHDKVAQILEKTKGSFMIKGSWV---AQYDMFLTSDPANVQHIMS   91 (497)
Q Consensus        27 ~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~~~k~g~v~~~~~~~~---~~~~~v~v~~p~~v~~il~   91 (497)
                      .||.|..--++||++.-.     -.+.+.++..+||+|..+..+.-   -|.-.|-..+++.+...+.
T Consensus         3 ~~~~~~~~l~V~nlp~~~-----t~~~l~~~F~~~G~v~~v~i~~~~~~~g~afV~f~~~~~A~~A~~   65 (115)
T 3lqv_A            3 LPPEVNRILYIRNLPYKI-----TAEEMYDIFGKYGPIRQIRVGNTPETRGTAYVVYEDIFDAKNAVD   65 (115)
T ss_dssp             CCTTCCSEEEEESCCTTC-----CHHHHHHHHHTTSCEEEEEEECSTTTTTCEEEEESSHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCCC-----CHHHHHHHHHhcCCeEEEEEeeCCCCCcEEEEEECCHHHHHHHHH
Confidence            466565556888874321     23457778889999877733211   2356778888888888775


Done!