BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047978
(320 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TSY|A Chain A, 4-Coumaroyl-Coa Ligase::stilbene Synthase Fusion Protein
Length = 979
Score = 380 bits (976), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/394 (50%), Positives = 255/394 (64%), Gaps = 76/394 (19%)
Query: 1 MALLGKFQETQRPQ----------ANPANCVYQTDYPDFYFRITSSNHMTELKEKFKRMY 50
MA + +F+ QR + A P +CVYQ+DY D+YF++T S HMT LK+KF R+
Sbjct: 588 MASVEEFRNAQRAKGPATILAIGTATPDHCVYQSDYADYYFKVTKSEHMTALKKKFNRIC 647
Query: 51 ------------------------------------ILVPKVPKLGKEAVSKAIKEWGQP 74
I+ +VPKLGKEA KA+KEWGQP
Sbjct: 648 DKSMIKKRYIHLTEEMLEEHPNIGAYMAPSLNIRQEIITAEVPKLGKEAALKALKEWGQP 707
Query: 75 ISKITHLISCSVSGVDMPGADYQLTKLLGLKPSVKRVMLT-----------------AES 117
SKITHL+ C+ SGV+MPGADY+L LLGL+PSV+RVML AE+
Sbjct: 708 KSKITHLVFCTTSGVEMPGADYKLANLLGLEPSVRRVMLYHQGCYAGGTVLRTAKDLAEN 767
Query: 118 NAGARVLVVCSEITVGTFRAPSDENLSCLVNRAIVGDGTAALIVGACPDINTERPLFHIV 177
NAGARVLVVCSEITV TFR PS++ L LV +A+ GDG+AA+IVG+ PDI+ ERPLF +V
Sbjct: 768 NAGARVLVVCSEITVVTFRGPSEDALDSLVGQALFGDGSAAVIVGSDPDISIERPLFQLV 827
Query: 178 PTAQTILPDSEDAIKGHFRE-----------SPLIADNIDKFLAESFDQVSLNDHDWNSL 226
AQT +P+S AI G+ RE LI++N++K L ++FD + ++D WNSL
Sbjct: 828 SAAQTFIPNSAGAIAGNLREVGLTFHLWPNVPTLISENVEKCLTQAFDPLGISD--WNSL 885
Query: 227 FWMMHPIGPAVLDQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGK 286
FW+ HP GPA+LD +E KL L+K KL TRHVLSEYGNM+SA VLF+LDEMRK+S++ +
Sbjct: 886 FWIAHPGGPAILDAVEAKLNLDKKKLEATRHVLSEYGNMSSACVLFILDEMRKKSLKGER 945
Query: 287 ATTGEELEWGVLLGFEAGLTVEAIVLRSIPMVSN 320
ATTGE L+WGVL GF GLT+E +VL SIPMV+N
Sbjct: 946 ATTGEGLDWGVLFGFGPGLTIETVVLHSIPMVTN 979
>pdb|3A5Q|A Chain A, Benzalacetone Synthase From Rheum Palmatum
pdb|3A5Q|B Chain B, Benzalacetone Synthase From Rheum Palmatum
pdb|3A5R|A Chain A, Benzalacetone Synthase From Rheum Palmatum Complexed With
4-Coumaroyl- Primed Monoketide Intermediate
pdb|3A5R|B Chain B, Benzalacetone Synthase From Rheum Palmatum Complexed With
4-Coumaroyl- Primed Monoketide Intermediate
Length = 387
Score = 376 bits (965), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/369 (52%), Positives = 243/369 (65%), Gaps = 66/369 (17%)
Query: 15 ANPANCVYQTDYPDFYFRITSSNHMTELKEKFKRM---------YILVPK---------- 55
ANP NC YQ D+PDFYFR+T+S+H+ LK+KFKR+ Y+ V +
Sbjct: 21 ANPPNCYYQADFPDFYFRVTNSDHLINLKQKFKRLCENSRIEKRYLHVTEEILKENPNIA 80
Query: 56 -----------------VPKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQL 98
V +LGKEA KAIKEWGQP SKITHLI C ++GVDMPGADYQL
Sbjct: 81 AYEATSLNVRHKMQVKGVAELGKEAALKAIKEWGQPKSKITHLIVCCLAGVDMPGADYQL 140
Query: 99 TKLLGLKPSVKRVML-----------------TAESNAGARVLVVCSEITVGTFRAPSDE 141
TKLL L PSVKR M AE+N GARVL+VCSE+T FR PS+
Sbjct: 141 TKLLDLDPSVKRFMFYHLGCYAGGTVLRLAKDIAENNKGARVLIVCSEMTTTCFRGPSET 200
Query: 142 NLSCLVNRAIVGDGTAALIVGACPDINTERPLFHIVPTAQTILPDSEDAIKGHFRES--- 198
+L ++ +AI+GDG AA+IVGA PD+ ERP+F +V TAQTI+P+S AI+GH ES
Sbjct: 201 HLDSMIGQAILGDGAAAVIVGADPDLTVERPIFELVSTAQTIVPESHGAIEGHLLESGLS 260
Query: 199 --------PLIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKT 250
LI++NI L+++F LN DWNSLFW+ HP GPA+LDQ+ K+GLEK
Sbjct: 261 FHLYKTVPTLISNNIKTCLSDAF--TPLNISDWNSLFWIAHPGGPAILDQVTAKVGLEKE 318
Query: 251 KLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEAI 310
KL+ TR VL +YGNM+SATV F++DEMRK+S+E G+ATTGE LEWGVL GF G+TVE +
Sbjct: 319 KLKVTRQVLKDYGNMSSATVFFIMDEMRKKSLENGQATTGEGLEWGVLFGFGPGITVETV 378
Query: 311 VLRSIPMVS 319
VLRS+P++S
Sbjct: 379 VLRSVPVIS 387
>pdb|3A5S|A Chain A, Benzalacetone Synthase (I207lL208F)
pdb|3A5S|B Chain B, Benzalacetone Synthase (I207lL208F)
Length = 387
Score = 374 bits (961), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/369 (52%), Positives = 242/369 (65%), Gaps = 66/369 (17%)
Query: 15 ANPANCVYQTDYPDFYFRITSSNHMTELKEKFKRM---------YILVPK---------- 55
ANP NC YQ D+PDFYFR+T+S+H+ LK+KFKR+ Y+ V +
Sbjct: 21 ANPPNCYYQADFPDFYFRVTNSDHLINLKQKFKRLCENSRIEKRYLHVTEEILKENPNIA 80
Query: 56 -----------------VPKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQL 98
V +LGKEA KAIKEWGQP SKITHLI C ++GVDMPGADYQL
Sbjct: 81 AYEATSLNVRHKMQVKGVAELGKEAALKAIKEWGQPKSKITHLIVCCLAGVDMPGADYQL 140
Query: 99 TKLLGLKPSVKRVML-----------------TAESNAGARVLVVCSEITVGTFRAPSDE 141
TKLL L PSVKR M AE+N GARVL+VCSE+T FR PS+
Sbjct: 141 TKLLDLDPSVKRFMFYHLGCYAGGTVLRLAKDIAENNKGARVLIVCSEMTTTCFRGPSET 200
Query: 142 NLSCLVNRAIVGDGTAALIVGACPDINTERPLFHIVPTAQTILPDSEDAIKGHFRES--- 198
+L ++ +A+ GDG AA+IVGA PD+ ERP+F +V TAQTI+P+S AI+GH ES
Sbjct: 201 HLDSMIGQALFGDGAAAVIVGADPDLTVERPIFELVSTAQTIVPESHGAIEGHLLESGLS 260
Query: 199 --------PLIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKT 250
LI++NI L+++F LN DWNSLFW+ HP GPA+LDQ+ K+GLEK
Sbjct: 261 FHLYKTVPTLISNNIKTCLSDAF--TPLNISDWNSLFWIAHPGGPAILDQVTAKVGLEKE 318
Query: 251 KLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEAI 310
KL+ TR VL +YGNM+SATV F++DEMRK+S+E G+ATTGE LEWGVL GF G+TVE +
Sbjct: 319 KLKVTRQVLKDYGNMSSATVFFIMDEMRKKSLENGQATTGEGLEWGVLFGFGPGITVETV 378
Query: 311 VLRSIPMVS 319
VLRS+P++S
Sbjct: 379 VLRSVPVIS 387
>pdb|1BI5|A Chain A, Chalcone Synthase From Alfalfa
Length = 389
Score = 371 bits (953), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/367 (53%), Positives = 239/367 (65%), Gaps = 66/367 (17%)
Query: 15 ANPANCVYQTDYPDFYFRITSSNHMTELKEKFKRMY------------------------ 50
ANPANCV Q+ YPDFYF+IT+S H TELKEKF+RM
Sbjct: 25 ANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSMIKRRYMYLTEEILKENPNVC 84
Query: 51 ------------ILVPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQL 98
++V +VP+LGKEA KAIKEWGQP SKITHLI C+ SGVDMPGADYQL
Sbjct: 85 EYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQL 144
Query: 99 TKLLGLKPSVKRVMLT-----------------AESNAGARVLVVCSEITVGTFRAPSDE 141
TKLLGL+P VKR M+ AE+N GARVLVVCSE+T TFR PSD
Sbjct: 145 TKLLGLRPYVKRYMMYQQGXFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDT 204
Query: 142 NLSCLVNRAIVGDGTAALIVGACPDINTERPLFHIVPTAQTILPDSEDAIKGHFRESPL- 200
+L LV +A+ GDG AALIVG+ P E+P+F +V TAQTI PDSE AI GH RE+ L
Sbjct: 205 HLDSLVGQALFGDGAAALIVGSDPVPEIEKPIFEMVWTAQTIAPDSEGAIDGHLREAGLT 264
Query: 201 ----------IADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKT 250
++ NI K L E+F+ + ++D +NS+FW+ HP GPA+LDQ+E KL L+
Sbjct: 265 FHLLKDVPGIVSKNITKALVEAFEPLGISD--YNSIFWIAHPGGPAILDQVEQKLALKPE 322
Query: 251 KLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEAI 310
K+ TR VLSEYGNM+SA VLF+LDEMRK+S + G TTGE LEWGVL GF GLT+E +
Sbjct: 323 KMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKTTGEGLEWGVLFGFGPGLTIETV 382
Query: 311 VLRSIPM 317
VLRS+ +
Sbjct: 383 VLRSVAI 389
>pdb|1CML|A Chain A, Chalcone Synthase From Alfalfa Complexed With Malonyl-Coa
pdb|1D6F|A Chain A, Chalcone Synthase C164a Mutant
Length = 389
Score = 371 bits (953), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/367 (53%), Positives = 239/367 (65%), Gaps = 66/367 (17%)
Query: 15 ANPANCVYQTDYPDFYFRITSSNHMTELKEKFKRMY------------------------ 50
ANPANCV Q+ YPDFYF+IT+S H TELKEKF+RM
Sbjct: 25 ANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSMIKRRYMYLTEEILKENPNVC 84
Query: 51 ------------ILVPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQL 98
++V +VP+LGKEA KAIKEWGQP SKITHLI C+ SGVDMPGADYQL
Sbjct: 85 EYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQL 144
Query: 99 TKLLGLKPSVKRVMLT-----------------AESNAGARVLVVCSEITVGTFRAPSDE 141
TKLLGL+P VKR M+ AE+N GARVLVVCSE+T TFR PSD
Sbjct: 145 TKLLGLRPYVKRYMMYQQGAFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDT 204
Query: 142 NLSCLVNRAIVGDGTAALIVGACPDINTERPLFHIVPTAQTILPDSEDAIKGHFRESPL- 200
+L LV +A+ GDG AALIVG+ P E+P+F +V TAQTI PDSE AI GH RE+ L
Sbjct: 205 HLDSLVGQALFGDGAAALIVGSDPVPEIEKPIFEMVWTAQTIAPDSEGAIDGHLREAGLT 264
Query: 201 ----------IADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKT 250
++ NI K L E+F+ + ++D +NS+FW+ HP GPA+LDQ+E KL L+
Sbjct: 265 FHLLKDVPGIVSKNITKALVEAFEPLGISD--YNSIFWIAHPGGPAILDQVEQKLALKPE 322
Query: 251 KLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEAI 310
K+ TR VLSEYGNM+SA VLF+LDEMRK+S + G TTGE LEWGVL GF GLT+E +
Sbjct: 323 KMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKTTGEGLEWGVLFGFGPGLTIETV 382
Query: 311 VLRSIPM 317
VLRS+ +
Sbjct: 383 VLRSVAI 389
>pdb|1BQ6|A Chain A, Chalcone Synthase From Alfalfa With Coenzyme A
Length = 388
Score = 371 bits (952), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/367 (53%), Positives = 239/367 (65%), Gaps = 66/367 (17%)
Query: 15 ANPANCVYQTDYPDFYFRITSSNHMTELKEKFKRMY------------------------ 50
ANPANCV Q+ YPDFYF+IT+S H TELKEKF+RM
Sbjct: 24 ANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSMIKRRYMYLTEEILKENPNVC 83
Query: 51 ------------ILVPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQL 98
++V +VP+LGKEA KAIKEWGQP SKITHLI C+ SGVDMPGADYQL
Sbjct: 84 EYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQL 143
Query: 99 TKLLGLKPSVKRVMLT-----------------AESNAGARVLVVCSEITVGTFRAPSDE 141
TKLLGL+P VKR M+ AE+N GARVLVVCSE+T TFR PSD
Sbjct: 144 TKLLGLRPYVKRYMMYQQGXFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDT 203
Query: 142 NLSCLVNRAIVGDGTAALIVGACPDINTERPLFHIVPTAQTILPDSEDAIKGHFRESPL- 200
+L LV +A+ GDG AALIVG+ P E+P+F +V TAQTI PDSE AI GH RE+ L
Sbjct: 204 HLDSLVGQALFGDGAAALIVGSDPVPEIEKPIFEMVWTAQTIAPDSEGAIDGHLREAGLT 263
Query: 201 ----------IADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKT 250
++ NI K L E+F+ + ++D +NS+FW+ HP GPA+LDQ+E KL L+
Sbjct: 264 FHLLKDVPGIVSKNITKALVEAFEPLGISD--YNSIFWIAHPGGPAILDQVEQKLALKPE 321
Query: 251 KLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEAI 310
K+ TR VLSEYGNM+SA VLF+LDEMRK+S + G TTGE LEWGVL GF GLT+E +
Sbjct: 322 KMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKTTGEGLEWGVLFGFGPGLTIETV 381
Query: 311 VLRSIPM 317
VLRS+ +
Sbjct: 382 VLRSVAI 388
>pdb|1CHW|A Chain A, Chalcone Synthase From Alfalfa Complexed With Hexanoyl-Coa
pdb|1CHW|B Chain B, Chalcone Synthase From Alfalfa Complexed With Hexanoyl-Coa
Length = 389
Score = 371 bits (952), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/367 (53%), Positives = 239/367 (65%), Gaps = 66/367 (17%)
Query: 15 ANPANCVYQTDYPDFYFRITSSNHMTELKEKFKRMY------------------------ 50
ANPANCV Q+ YPDFYF+IT+S H TELKEKF+RM
Sbjct: 25 ANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSMIKRRYMYLTEEILKENPNVC 84
Query: 51 ------------ILVPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQL 98
++V +VP+LGKEA KAIKEWGQP SKITHLI C+ SGVDMPGADYQL
Sbjct: 85 EYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQL 144
Query: 99 TKLLGLKPSVKRVMLT-----------------AESNAGARVLVVCSEITVGTFRAPSDE 141
TKLLGL+P VKR M+ AE+N GARVLVVCSE+T TFR PSD
Sbjct: 145 TKLLGLRPYVKRYMMYQQGSFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDT 204
Query: 142 NLSCLVNRAIVGDGTAALIVGACPDINTERPLFHIVPTAQTILPDSEDAIKGHFRESPL- 200
+L LV +A+ GDG AALIVG+ P E+P+F +V TAQTI PDSE AI GH RE+ L
Sbjct: 205 HLDSLVGQALFGDGAAALIVGSDPVPEIEKPIFEMVWTAQTIAPDSEGAIDGHLREAGLT 264
Query: 201 ----------IADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKT 250
++ NI K L E+F+ + ++D +NS+FW+ HP GPA+LDQ+E KL L+
Sbjct: 265 FHLLKDVPGIVSKNITKALVEAFEPLGISD--YNSIFWIAHPGGPAILDQVEQKLALKPE 322
Query: 251 KLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEAI 310
K+ TR VLSEYGNM+SA VLF+LDEMRK+S + G TTGE LEWGVL GF GLT+E +
Sbjct: 323 KMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKTTGEGLEWGVLFGFGPGLTIETV 382
Query: 311 VLRSIPM 317
VLRS+ +
Sbjct: 383 VLRSVAI 389
>pdb|1CGZ|A Chain A, Chalcone Synthase From Alfalfa Complexed With Resveratrol
pdb|1CGK|A Chain A, Chalcone Synthase From Alfalfa Complexed With Naringenin
Length = 389
Score = 371 bits (952), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/367 (53%), Positives = 239/367 (65%), Gaps = 66/367 (17%)
Query: 15 ANPANCVYQTDYPDFYFRITSSNHMTELKEKFKRMY------------------------ 50
ANPANCV Q+ YPDFYF+IT+S H TELKEKF+RM
Sbjct: 25 ANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSMIKRRYMYLTEEILKENPNVC 84
Query: 51 ------------ILVPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQL 98
++V +VP+LGKEA KAIKEWGQP SKITHLI C+ SGVDMPGADYQL
Sbjct: 85 EYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQL 144
Query: 99 TKLLGLKPSVKRVMLT-----------------AESNAGARVLVVCSEITVGTFRAPSDE 141
TKLLGL+P VKR M+ AE+N GARVLVVCSE+T TFR PSD
Sbjct: 145 TKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDT 204
Query: 142 NLSCLVNRAIVGDGTAALIVGACPDINTERPLFHIVPTAQTILPDSEDAIKGHFRESPL- 200
+L LV +A+ GDG AALIVG+ P E+P+F +V TAQTI PDSE AI GH RE+ L
Sbjct: 205 HLDSLVGQALFGDGAAALIVGSDPVPEIEKPIFEMVWTAQTIAPDSEGAIDGHLREAGLT 264
Query: 201 ----------IADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKT 250
++ NI K L E+F+ + ++D +NS+FW+ HP GPA+LDQ+E KL L+
Sbjct: 265 FHLLKDVPGIVSKNITKALVEAFEPLGISD--YNSIFWIAHPGGPAILDQVEQKLALKPE 322
Query: 251 KLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEAI 310
K+ TR VLSEYGNM+SA VLF+LDEMRK+S + G TTGE LEWGVL GF GLT+E +
Sbjct: 323 KMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKTTGEGLEWGVLFGFGPGLTIETV 382
Query: 311 VLRSIPM 317
VLRS+ +
Sbjct: 383 VLRSVAI 389
>pdb|1JWX|A Chain A, Chalcone Synthase--F215s Mutant
Length = 389
Score = 371 bits (952), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/367 (53%), Positives = 239/367 (65%), Gaps = 66/367 (17%)
Query: 15 ANPANCVYQTDYPDFYFRITSSNHMTELKEKFKRMY------------------------ 50
ANPANCV Q+ YPDFYF+IT+S H TELKEKF+RM
Sbjct: 25 ANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSMIKRRYMYLTEEILKENPNVC 84
Query: 51 ------------ILVPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQL 98
++V +VP+LGKEA KAIKEWGQP SKITHLI C+ SGVDMPGADYQL
Sbjct: 85 EYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQL 144
Query: 99 TKLLGLKPSVKRVMLT-----------------AESNAGARVLVVCSEITVGTFRAPSDE 141
TKLLGL+P VKR M+ AE+N GARVLVVCSE+T TFR PSD
Sbjct: 145 TKLLGLRPYVKRYMMYQQGXFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDT 204
Query: 142 NLSCLVNRAIVGDGTAALIVGACPDINTERPLFHIVPTAQTILPDSEDAIKGHFRESPL- 200
+L LV +A+ GDG AALIVG+ P E+P+F +V TAQTI PDSE AI GH RE+ L
Sbjct: 205 HLDSLVGQALSGDGAAALIVGSDPVPEIEKPIFEMVWTAQTIAPDSEGAIDGHLREAGLT 264
Query: 201 ----------IADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKT 250
++ NI K L E+F+ + ++D +NS+FW+ HP GPA+LDQ+E KL L+
Sbjct: 265 FHLLKDVPGIVSKNITKALVEAFEPLGISD--YNSIFWIAHPGGPAILDQVEQKLALKPE 322
Query: 251 KLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEAI 310
K+ TR VLSEYGNM+SA VLF+LDEMRK+S + G TTGE LEWGVL GF GLT+E +
Sbjct: 323 KMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKTTGEGLEWGVLFGFGPGLTIETV 382
Query: 311 VLRSIPM 317
VLRS+ +
Sbjct: 383 VLRSVAI 389
>pdb|1I86|A Chain A, Chalcone Synthase, G256a Mutant
Length = 389
Score = 369 bits (947), Expect = e-102, Method: Compositional matrix adjust.
Identities = 195/367 (53%), Positives = 238/367 (64%), Gaps = 66/367 (17%)
Query: 15 ANPANCVYQTDYPDFYFRITSSNHMTELKEKFKRMY------------------------ 50
ANPANCV Q+ YPDFYF+IT+S H TELKEKF+RM
Sbjct: 25 ANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSMIKRRYMYLTEEILKENPNVC 84
Query: 51 ------------ILVPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQL 98
++V +VP+LGKEA KAIKEWGQP SKITHLI C+ SGVDMPGADYQL
Sbjct: 85 EYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQL 144
Query: 99 TKLLGLKPSVKRVMLT-----------------AESNAGARVLVVCSEITVGTFRAPSDE 141
TKLLGL+P VKR M+ AE+N GARVLVVCSE+T TFR PSD
Sbjct: 145 TKLLGLRPYVKRYMMYQQGXFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDT 204
Query: 142 NLSCLVNRAIVGDGTAALIVGACPDINTERPLFHIVPTAQTILPDSEDAIKGHFRESPL- 200
+L LV +A+ GDG AALIVG+ P E+P+F +V TAQTI PDSE AI H RE+ L
Sbjct: 205 HLDSLVGQALFGDGAAALIVGSDPVPEIEKPIFEMVWTAQTIAPDSEGAIDAHLREAGLT 264
Query: 201 ----------IADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKT 250
++ NI K L E+F+ + ++D +NS+FW+ HP GPA+LDQ+E KL L+
Sbjct: 265 FHLLKDVPGIVSKNITKALVEAFEPLGISD--YNSIFWIAHPGGPAILDQVEQKLALKPE 322
Query: 251 KLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEAI 310
K+ TR VLSEYGNM+SA VLF+LDEMRK+S + G TTGE LEWGVL GF GLT+E +
Sbjct: 323 KMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKTTGEGLEWGVLFGFGPGLTIETV 382
Query: 311 VLRSIPM 317
VLRS+ +
Sbjct: 383 VLRSVAI 389
>pdb|1D6I|A Chain A, Chalcone Synthase (H303q Mutant)
pdb|1D6I|B Chain B, Chalcone Synthase (H303q Mutant)
Length = 388
Score = 368 bits (945), Expect = e-102, Method: Compositional matrix adjust.
Identities = 195/367 (53%), Positives = 238/367 (64%), Gaps = 66/367 (17%)
Query: 15 ANPANCVYQTDYPDFYFRITSSNHMTELKEKFKRMY------------------------ 50
ANPANCV Q+ YPDFYF+IT+S H TELKEKF+RM
Sbjct: 24 ANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSMIKRRYMYLTEEILKENPNVC 83
Query: 51 ------------ILVPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQL 98
++V +VP+LGKEA KAIKEWGQP SKITHLI C+ SGVDMPGADYQL
Sbjct: 84 EYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQL 143
Query: 99 TKLLGLKPSVKRVMLT-----------------AESNAGARVLVVCSEITVGTFRAPSDE 141
TKLLGL+P VKR M+ AE+N GARVLVVCSE+T TFR PSD
Sbjct: 144 TKLLGLRPYVKRYMMYQQGXFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDT 203
Query: 142 NLSCLVNRAIVGDGTAALIVGACPDINTERPLFHIVPTAQTILPDSEDAIKGHFRESPL- 200
+L LV +A+ GDG AALIVG+ P E+P+F +V TAQTI PDSE AI GH RE+ L
Sbjct: 204 HLDSLVGQALFGDGAAALIVGSDPVPEIEKPIFEMVWTAQTIAPDSEGAIDGHLREAGLT 263
Query: 201 ----------IADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKT 250
++ NI K L E+F+ + ++D +NS+FW+ P GPA+LDQ+E KL L+
Sbjct: 264 FHLLKDVPGIVSKNITKALVEAFEPLGISD--YNSIFWIAQPGGPAILDQVEQKLALKPE 321
Query: 251 KLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEAI 310
K+ TR VLSEYGNM+SA VLF+LDEMRK+S + G TTGE LEWGVL GF GLT+E +
Sbjct: 322 KMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKTTGEGLEWGVLFGFGPGLTIETV 381
Query: 311 VLRSIPM 317
VLRS+ +
Sbjct: 382 VLRSVAI 388
>pdb|1D6H|A Chain A, Chalone Synthase (N336a Mutant Complexed With Coa)
Length = 387
Score = 368 bits (945), Expect = e-102, Method: Compositional matrix adjust.
Identities = 195/367 (53%), Positives = 238/367 (64%), Gaps = 66/367 (17%)
Query: 15 ANPANCVYQTDYPDFYFRITSSNHMTELKEKFKRMY------------------------ 50
ANPANCV Q+ YPDFYF+IT+S H TELKEKF+RM
Sbjct: 23 ANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSMIKRRYMYLTEEILKENPNVC 82
Query: 51 ------------ILVPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQL 98
++V +VP+LGKEA KAIKEWGQP SKITHLI C+ SGVDMPGADYQL
Sbjct: 83 EYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQL 142
Query: 99 TKLLGLKPSVKRVMLT-----------------AESNAGARVLVVCSEITVGTFRAPSDE 141
TKLLGL+P VKR M+ AE+N GARVLVVCSE+T TFR PSD
Sbjct: 143 TKLLGLRPYVKRYMMYQQGXFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDT 202
Query: 142 NLSCLVNRAIVGDGTAALIVGACPDINTERPLFHIVPTAQTILPDSEDAIKGHFRESPL- 200
+L LV +A+ GDG AALIVG+ P E+P+F +V TAQTI PDSE AI GH RE+ L
Sbjct: 203 HLDSLVGQALFGDGAAALIVGSDPVPEIEKPIFEMVWTAQTIAPDSEGAIDGHLREAGLT 262
Query: 201 ----------IADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKT 250
++ NI K L E+F+ + ++D +NS+FW+ HP GPA+LDQ+E KL L+
Sbjct: 263 FHLLKDVPGIVSKNITKALVEAFEPLGISD--YNSIFWIAHPGGPAILDQVEQKLALKPE 320
Query: 251 KLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEAI 310
K+ TR VLSEYG M+SA VLF+LDEMRK+S + G TTGE LEWGVL GF GLT+E +
Sbjct: 321 KMNATREVLSEYGAMSSACVLFILDEMRKKSTQNGLKTTGEGLEWGVLFGFGPGLTIETV 380
Query: 311 VLRSIPM 317
VLRS+ +
Sbjct: 381 VLRSVAI 387
>pdb|1I8B|A Chain A, Chalcone Synthase (g256f)
pdb|1I8B|B Chain B, Chalcone Synthase (g256f)
Length = 389
Score = 367 bits (943), Expect = e-102, Method: Compositional matrix adjust.
Identities = 195/367 (53%), Positives = 238/367 (64%), Gaps = 66/367 (17%)
Query: 15 ANPANCVYQTDYPDFYFRITSSNHMTELKEKFKRMY------------------------ 50
ANPANCV Q+ YPDFYF+IT+S H TELKEKF+RM
Sbjct: 25 ANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSMIKRRYMYLTEEILKENPNVC 84
Query: 51 ------------ILVPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQL 98
++V +VP+LGKEA KAIKEWGQP SKITHLI C+ SGVDMPGADYQL
Sbjct: 85 EYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQL 144
Query: 99 TKLLGLKPSVKRVMLT-----------------AESNAGARVLVVCSEITVGTFRAPSDE 141
TKLLGL+P VKR M+ AE+N GARVLVVCSE+T TFR PSD
Sbjct: 145 TKLLGLRPYVKRYMMYQQGXFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDT 204
Query: 142 NLSCLVNRAIVGDGTAALIVGACPDINTERPLFHIVPTAQTILPDSEDAIKGHFRESPL- 200
+L LV +A+ GDG AALIVG+ P E+P+F +V TAQTI PDSE AI H RE+ L
Sbjct: 205 HLDSLVGQALFGDGAAALIVGSDPVPEIEKPIFEMVWTAQTIAPDSEGAIDFHLREAGLT 264
Query: 201 ----------IADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKT 250
++ NI K L E+F+ + ++D +NS+FW+ HP GPA+LDQ+E KL L+
Sbjct: 265 FHLLKDVPGIVSKNITKALVEAFEPLGISD--YNSIFWIAHPGGPAILDQVEQKLALKPE 322
Query: 251 KLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEAI 310
K+ TR VLSEYGNM+SA VLF+LDEMRK+S + G TTGE LEWGVL GF GLT+E +
Sbjct: 323 KMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKTTGEGLEWGVLFGFGPGLTIETV 382
Query: 311 VLRSIPM 317
VLRS+ +
Sbjct: 383 VLRSVAI 389
>pdb|1I89|A Chain A, Chalcone Synthase (G256l)
pdb|1I89|B Chain B, Chalcone Synthase (G256l)
Length = 389
Score = 367 bits (943), Expect = e-102, Method: Compositional matrix adjust.
Identities = 195/367 (53%), Positives = 238/367 (64%), Gaps = 66/367 (17%)
Query: 15 ANPANCVYQTDYPDFYFRITSSNHMTELKEKFKRMY------------------------ 50
ANPANCV Q+ YPDFYF+IT+S H TELKEKF+RM
Sbjct: 25 ANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSMIKRRYMYLTEEILKENPNVC 84
Query: 51 ------------ILVPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQL 98
++V +VP+LGKEA KAIKEWGQP SKITHLI C+ SGVDMPGADYQL
Sbjct: 85 EYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQL 144
Query: 99 TKLLGLKPSVKRVMLT-----------------AESNAGARVLVVCSEITVGTFRAPSDE 141
TKLLGL+P VKR M+ AE+N GARVLVVCSE+T TFR PSD
Sbjct: 145 TKLLGLRPYVKRYMMYQQGXFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDT 204
Query: 142 NLSCLVNRAIVGDGTAALIVGACPDINTERPLFHIVPTAQTILPDSEDAIKGHFRESPL- 200
+L LV +A+ GDG AALIVG+ P E+P+F +V TAQTI PDSE AI H RE+ L
Sbjct: 205 HLDSLVGQALFGDGAAALIVGSDPVPEIEKPIFEMVWTAQTIAPDSEGAIDLHLREAGLT 264
Query: 201 ----------IADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKT 250
++ NI K L E+F+ + ++D +NS+FW+ HP GPA+LDQ+E KL L+
Sbjct: 265 FHLLKDVPGIVSKNITKALVEAFEPLGISD--YNSIFWIAHPGGPAILDQVEQKLALKPE 322
Query: 251 KLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEAI 310
K+ TR VLSEYGNM+SA VLF+LDEMRK+S + G TTGE LEWGVL GF GLT+E +
Sbjct: 323 KMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKTTGEGLEWGVLFGFGPGLTIETV 382
Query: 311 VLRSIPM 317
VLRS+ +
Sbjct: 383 VLRSVAI 389
>pdb|1I88|A Chain A, Chalcone Synthase (G256v)
pdb|1I88|B Chain B, Chalcone Synthase (G256v)
Length = 389
Score = 367 bits (943), Expect = e-102, Method: Compositional matrix adjust.
Identities = 195/367 (53%), Positives = 238/367 (64%), Gaps = 66/367 (17%)
Query: 15 ANPANCVYQTDYPDFYFRITSSNHMTELKEKFKRMY------------------------ 50
ANPANCV Q+ YPDFYF+IT+S H TELKEKF+RM
Sbjct: 25 ANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSMIKRRYMYLTEEILKENPNVC 84
Query: 51 ------------ILVPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQL 98
++V +VP+LGKEA KAIKEWGQP SKITHLI C+ SGVDMPGADYQL
Sbjct: 85 EYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQL 144
Query: 99 TKLLGLKPSVKRVMLT-----------------AESNAGARVLVVCSEITVGTFRAPSDE 141
TKLLGL+P VKR M+ AE+N GARVLVVCSE+T TFR PSD
Sbjct: 145 TKLLGLRPYVKRYMMYQQGXFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDT 204
Query: 142 NLSCLVNRAIVGDGTAALIVGACPDINTERPLFHIVPTAQTILPDSEDAIKGHFRESPL- 200
+L LV +A+ GDG AALIVG+ P E+P+F +V TAQTI PDSE AI H RE+ L
Sbjct: 205 HLDSLVGQALFGDGAAALIVGSDPVPEIEKPIFEMVWTAQTIAPDSEGAIDVHLREAGLT 264
Query: 201 ----------IADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKT 250
++ NI K L E+F+ + ++D +NS+FW+ HP GPA+LDQ+E KL L+
Sbjct: 265 FHLLKDVPGIVSKNITKALVEAFEPLGISD--YNSIFWIAHPGGPAILDQVEQKLALKPE 322
Query: 251 KLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEAI 310
K+ TR VLSEYGNM+SA VLF+LDEMRK+S + G TTGE LEWGVL GF GLT+E +
Sbjct: 323 KMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKTTGEGLEWGVLFGFGPGLTIETV 382
Query: 311 VLRSIPM 317
VLRS+ +
Sbjct: 383 VLRSVAI 389
>pdb|1U0V|A Chain A, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Of Specificity Of Type Iii Polyketide
Synthases: 18xchs Structure
pdb|1U0V|B Chain B, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Of Specificity Of Type Iii Polyketide
Synthases: 18xchs Structure
pdb|1U0W|A Chain A, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Specificity Of Type Iii Polyketide
Synthases: 18xchs+resveratrol Structure
pdb|1U0W|B Chain B, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Specificity Of Type Iii Polyketide
Synthases: 18xchs+resveratrol Structure
pdb|1U0W|C Chain C, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Specificity Of Type Iii Polyketide
Synthases: 18xchs+resveratrol Structure
pdb|1U0W|D Chain D, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Specificity Of Type Iii Polyketide
Synthases: 18xchs+resveratrol Structure
Length = 393
Score = 362 bits (928), Expect = e-100, Method: Compositional matrix adjust.
Identities = 193/367 (52%), Positives = 236/367 (64%), Gaps = 66/367 (17%)
Query: 15 ANPANCVYQTDYPDFYFRITSSNHMTELKEKFKRM------------------------- 49
ANPANCV Q+ YPDFYF+IT+S H TELKEKF+RM
Sbjct: 29 ANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSMIKRRYMYLTEEILKENPNVC 88
Query: 50 -----------YILVPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQL 98
+L +VP+LGKEA KAIKEWGQP SKITHLI CS + D+PGADYQL
Sbjct: 89 EYMAPSLDARQAMLAMEVPRLGKEAAVKAIKEWGQPKSKITHLIVCSTTTPDLPGADYQL 148
Query: 99 TKLLGLKPSVKRVML-----------------TAESNAGARVLVVCSEITVGTFRAPSDE 141
TKLLGL+P VKRV + AE+N GARVLVVCSE+T TFR PSD
Sbjct: 149 TKLLGLRPYVKRVGVFQHGCFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDT 208
Query: 142 NLSCLVNRAIVGDGTAALIVGACPDINTERPLFHIVPTAQTILPDSEDAIKGHFRESPL- 200
+L LV +A+ GDG AALIVG+ P E+P+F +V TAQTI PDSE AI GH RE+ L
Sbjct: 209 HLDSLVGQALFGDGAAALIVGSDPVPEIEKPIFEMVWTAQTIAPDSEGAIDGHLREAGLT 268
Query: 201 ----------IADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKT 250
++ NI K L E+F+ + ++D +NS+FW+ HP GPA+LDQ+E KL L+
Sbjct: 269 FHLKGAVPDIVSKNITKALVEAFEPLGISD--YNSIFWIAHPGGPAILDQVEQKLALKPE 326
Query: 251 KLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEAI 310
K+ TR VLSEYGNM+SA VLF+LDEMRK+S + G TTGE LEWGVL GF GLT+E +
Sbjct: 327 KMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKTTGEGLEWGVLFGFGPGLTIETV 386
Query: 311 VLRSIPM 317
VLRS+ +
Sbjct: 387 VLRSVAI 393
>pdb|1QLV|A Chain A, Pyrone Synthase (Pys) From Gerbera Hybrida
pdb|1QLV|B Chain B, Pyrone Synthase (Pys) From Gerbera Hybrida
pdb|1EE0|A Chain A, 2-Pyrone Synthase Complexed With Acetoacetyl-Coa
pdb|1EE0|B Chain B, 2-Pyrone Synthase Complexed With Acetoacetyl-Coa
Length = 402
Score = 345 bits (885), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 183/365 (50%), Positives = 227/365 (62%), Gaps = 66/365 (18%)
Query: 15 ANPANCVYQTDYPDFYFRITSSNHMTELKEKFKRMY------------------------ 50
A P NCV Q DY D+YFR+T S HM +LKEKFKR+
Sbjct: 30 ATPPNCVAQADYADYYFRVTKSEHMVDLKEKFKRICEKTAIKKRYLALTEDYLQENPTMC 89
Query: 51 ------------ILVPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQL 98
++V VP LGKEA KAI EWG P SKITHLI C+ +GVDMPGADYQL
Sbjct: 90 EFMAPSLNARQDLVVTGVPMLGKEAAVKAIDEWGLPKSKITHLIFCTTAGVDMPGADYQL 149
Query: 99 TKLLGLKPSVKRVML-----------------TAESNAGARVLVVCSEITVGTFRAPSDE 141
KLLGL PSVKR ML AE+N G+RVL+VCSEIT F P++
Sbjct: 150 VKLLGLSPSVKRYMLYQQGXAAGGTVLRLAKDLAENNKGSRVLIVCSEITAILFHGPNEN 209
Query: 142 NLSCLVNRAIVGDGTAALIVGACPDINTERPLFHIVPTAQTILPDSEDAIKGHFRESPL- 200
+L LV +A+ GDG AALIVG+ P + ERP+F IV T QTILPD+E A+K H RE L
Sbjct: 210 HLDSLVAQALFGDGAAALIVGSGPHLAVERPIFEIVSTDQTILPDTEKAMKLHLREGGLT 269
Query: 201 ----------IADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKT 250
+A NI+ ++ + + D WNS+FWM+HP G A+LDQ+E KL L++
Sbjct: 270 FQLHRDVPLMVAKNIENAAEKALSPLGITD--WNSVFWMVHPGGRAILDQVERKLNLKED 327
Query: 251 KLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEAI 310
KLR +RHVLSEYGN+ SA VLF++DE+RKRS+ EGK+TTGE L+ GVL GF G+TVE +
Sbjct: 328 KLRASRHVLSEYGNLISACVLFIIDEVRKRSMAEGKSTTGEGLDCGVLFGFGPGMTVETV 387
Query: 311 VLRSI 315
VLRS+
Sbjct: 388 VLRSV 392
>pdb|1XES|A Chain A, Crystal Structure Of Stilbene Synthase From Pinus
Sylvestris
pdb|1XES|B Chain B, Crystal Structure Of Stilbene Synthase From Pinus
Sylvestris
pdb|1XES|C Chain C, Crystal Structure Of Stilbene Synthase From Pinus
Sylvestris
pdb|1XES|D Chain D, Crystal Structure Of Stilbene Synthase From Pinus
Sylvestris
pdb|1XET|A Chain A, Crystal Structure Of Stilbene Synthase From Pinus
Sylvestris, Complexed With Methylmalonyl Coa
pdb|1XET|B Chain B, Crystal Structure Of Stilbene Synthase From Pinus
Sylvestris, Complexed With Methylmalonyl Coa
pdb|1XET|C Chain C, Crystal Structure Of Stilbene Synthase From Pinus
Sylvestris, Complexed With Methylmalonyl Coa
pdb|1XET|D Chain D, Crystal Structure Of Stilbene Synthase From Pinus
Sylvestris, Complexed With Methylmalonyl Coa
Length = 413
Score = 320 bits (819), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 177/368 (48%), Positives = 225/368 (61%), Gaps = 67/368 (18%)
Query: 15 ANPANCVYQTDYPDFYFRITSSNHMTELKEKFKR-----------MYI------------ 51
ANP N V Q+ YPDFYFRIT + H TELK+KFKR MY+
Sbjct: 47 ANPPNAVDQSTYPDFYFRITGNEHNTELKDKFKRICERSAIKQRYMYLTEEILKKNPDVC 106
Query: 52 --------------LVPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQ 97
L +VP+L KEA KAI+EWGQ S ITHLI CS + D+PGAD++
Sbjct: 107 AFVEVPSLDARQAMLAMEVPRLAKEAAEKAIQEWGQSKSGITHLIFCSTTTPDLPGADFE 166
Query: 98 LTKLLGLKPSVKRVML-----------------TAESNAGARVLVVCSEITVGTFRAPSD 140
+ KLLGL PSVKRV + AE+N GARVLV+CSE T TFR PS+
Sbjct: 167 VAKLLGLHPSVKRVGVFQHGCFAGGTVLRMAKDLAENNRGARVLVICSETTAVTFRGPSE 226
Query: 141 ENLSCLVNRAIVGDGTAALIVGACPDINTERPLFHIVPTAQTILPDSEDAIKGHFRE--- 197
+L LV +A+ GDG +ALIVGA P E+ F IV TAQT++P+SE AI G RE
Sbjct: 227 THLDSLVGQALFGDGASALIVGADPIPQVEKACFEIVWTAQTVVPNSEGAIGGKVREVGL 286
Query: 198 --------SPLIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEK 249
LI+ NI+ + E+F Q ++D WN LFW++HP G A+LD++E KL L+
Sbjct: 287 TFQLKGAVPDLISANIENCMVEAFSQFKISD--WNKLFWVVHPGGRAILDRVEAKLNLDP 344
Query: 250 TKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEA 309
TKL TRHV+SEYGNM+SA V F+LD+ RK S++ G +TTGE LE GVL GF GLT+E
Sbjct: 345 TKLIPTRHVMSEYGNMSSACVHFILDQTRKASLQNGCSTTGEGLEMGVLFGFGPGLTIET 404
Query: 310 IVLRSIPM 317
+VL+S+P+
Sbjct: 405 VVLKSVPI 412
>pdb|1U0U|A Chain A, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Specificity Of Type Iii Polyketide
Synthases: Pine Stilbene Synthase Structure
pdb|1U0U|B Chain B, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Specificity Of Type Iii Polyketide
Synthases: Pine Stilbene Synthase Structure
pdb|1U0U|C Chain C, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Specificity Of Type Iii Polyketide
Synthases: Pine Stilbene Synthase Structure
pdb|1U0U|D Chain D, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Specificity Of Type Iii Polyketide
Synthases: Pine Stilbene Synthase Structure
pdb|1U0U|E Chain E, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Specificity Of Type Iii Polyketide
Synthases: Pine Stilbene Synthase Structure
pdb|1U0U|F Chain F, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Specificity Of Type Iii Polyketide
Synthases: Pine Stilbene Synthase Structure
Length = 397
Score = 319 bits (818), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 177/368 (48%), Positives = 225/368 (61%), Gaps = 67/368 (18%)
Query: 15 ANPANCVYQTDYPDFYFRITSSNHMTELKEKFKR-----------MYI------------ 51
ANP N V Q+ YPDFYFRIT + H TELK+KFKR MY+
Sbjct: 31 ANPPNAVDQSTYPDFYFRITGNEHNTELKDKFKRICERSAIKQRYMYLTEEILKKNPDVC 90
Query: 52 --------------LVPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQ 97
L +VP+L KEA KAI+EWGQ S ITHLI CS + D+PGAD++
Sbjct: 91 AFVEVPSLDARQAMLAMEVPRLAKEAAEKAIQEWGQSKSGITHLIFCSTTTPDLPGADFE 150
Query: 98 LTKLLGLKPSVKRVML-----------------TAESNAGARVLVVCSEITVGTFRAPSD 140
+ KLLGL PSVKRV + AE+N GARVLV+CSE T TFR PS+
Sbjct: 151 VAKLLGLHPSVKRVGVFQHGCFAGGTVLRMAKDLAENNRGARVLVICSETTAVTFRGPSE 210
Query: 141 ENLSCLVNRAIVGDGTAALIVGACPDINTERPLFHIVPTAQTILPDSEDAIKGHFRE--- 197
+L LV +A+ GDG +ALIVGA P E+ F IV TAQT++P+SE AI G RE
Sbjct: 211 THLDSLVGQALFGDGASALIVGADPIPQVEKACFEIVWTAQTVVPNSEGAIGGKVREVGL 270
Query: 198 --------SPLIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEK 249
LI+ NI+ + E+F Q ++D WN LFW++HP G A+LD++E KL L+
Sbjct: 271 TFQLKGAVPDLISANIENCMVEAFSQFKISD--WNKLFWVVHPGGRAILDRVEAKLNLDP 328
Query: 250 TKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEA 309
TKL TRHV+SEYGNM+SA V F+LD+ RK S++ G +TTGE LE GVL GF GLT+E
Sbjct: 329 TKLIPTRHVMSEYGNMSSACVHFILDQTRKASLQNGCSTTGEGLEMGVLFGFGPGLTIET 388
Query: 310 IVLRSIPM 317
+VL+S+P+
Sbjct: 389 VVLKSVPI 396
>pdb|1Z1E|A Chain A, Crystal Structure Of Stilbene Synthase From Arachis
Hypogaea
pdb|1Z1F|A Chain A, Crystal Structure Of Stilbene Synthase From Arachis
Hypogaea (Resveratrol-Bound Form)
Length = 390
Score = 318 bits (815), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 169/367 (46%), Positives = 228/367 (62%), Gaps = 66/367 (17%)
Query: 15 ANPANCVYQTDYPDFYFRITSSNHMTELKEKFKR-----------MYI------------ 51
ANP NCV Q+ Y D+YFR+T+S HMT+LK+KF+R MY+
Sbjct: 26 ANPPNCVDQSTYADYYFRVTNSEHMTDLKKKFQRICERTQIKNRHMYLTEEILKENPNMC 85
Query: 52 -------------LVPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQL 98
++ +VP++GKEA +KAIKEWGQP+SKITHLI C+ SGV +PG DY+L
Sbjct: 86 AYKAPSLDAREDMMIREVPRVGKEAATKAIKEWGQPMSKITHLIFCTTSGVALPGVDYEL 145
Query: 99 TKLLGLKPSVKRVMLT-----------------AESNAGARVLVVCSEITVGTFRAPSDE 141
LLGL PSVKR M+ AE+N ARVL+VCSE T TFR PS+
Sbjct: 146 IVLLGLDPSVKRYMMYHQGCFAGGTVLRLAKDLAENNKDARVLIVCSENTSVTFRGPSET 205
Query: 142 NLSCLVNRAIVGDGTAALIVGACPDINTERPLFHIVPTAQTILPDSEDAIKGHFRESPL- 200
++ LV +A+ DG AA+I+G+ P E PLF IV T Q ++P+S AI G RE L
Sbjct: 206 DMDSLVGQALFADGAAAIIIGSDPVPEVENPLFEIVSTDQQLVPNSHGAIGGLLREVGLT 265
Query: 201 ----------IADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKT 250
I+ NI+ L+++FD + ++D +NS+FW+ HP G A+LDQ+E K+ L+
Sbjct: 266 FYLNKSVPDIISQNINDALSKAFDPLGISD--YNSIFWIAHPGGRAILDQVEEKVNLKPE 323
Query: 251 KLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEAI 310
K++ TR VLS YGNM+SA V F++D MRK+S+E G TTGE L+WGVL GF GLT+E +
Sbjct: 324 KMKATRDVLSNYGNMSSACVFFIMDLMRKKSLEAGLKTTGEGLDWGVLFGFGPGLTIETV 383
Query: 311 VLRSIPM 317
VLRS+ +
Sbjct: 384 VLRSMAI 390
>pdb|3AWJ|A Chain A, Crystal Structure Of The Huperzia Serrata Polyketide
Synthase 1 Complexed With Coa-Sh
pdb|3AWJ|B Chain B, Crystal Structure Of The Huperzia Serrata Polyketide
Synthase 1 Complexed With Coa-Sh
pdb|3AWK|A Chain A, Crystal Structure Of The Polyketide Synthase 1 From
Huperzia Serrata
Length = 402
Score = 318 bits (815), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 176/365 (48%), Positives = 220/365 (60%), Gaps = 66/365 (18%)
Query: 15 ANPANCVYQTDYPDFYFRITSSNHMTELKEKFKRMY------------------------ 50
+NP N Q+ YPDF+F +T+ N TELK+KF+R+
Sbjct: 38 SNPTNIFEQSTYPDFFFDVTNCNDKTELKKKFQRICDKSGIKKRHFHLTDEILRKNPSIC 97
Query: 51 ------------ILVPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQL 98
I V +VPKL KEA AIK+WGQP SKITHL+ + SGVDMPGAD+QL
Sbjct: 98 KFKEASLDPRQDIAVLEVPKLAKEAAISAIKQWGQPKSKITHLVFATTSGVDMPGADFQL 157
Query: 99 TKLLGLKPSVKRVMLT-----------------AESNAGARVLVVCSEITVGTFRAPSDE 141
KLLGL+P+VKRVML AE+N GARVLV CSE+T TFRAPS+
Sbjct: 158 AKLLGLRPTVKRVMLYQQGXYAGATVLRVAKDLAENNKGARVLVACSEVTAVTFRAPSET 217
Query: 142 NLSCLVNRAIVGDGTAALIVGACPDINTERPLFHIVPTAQTILPDSEDAIKGHFRESPLI 201
+L LV A+ GDG AALIVG+ P E+PLF I + +LPDS+ AI GH RE+ LI
Sbjct: 218 HLDGLVGSALFGDGAAALIVGSDPVPQEEKPLFEIHWAGEAVLPDSDGAINGHLREAGLI 277
Query: 202 -----------ADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKT 250
+ NIDK LAE + V +N +FW +HP GPA+LDQIE KLGL
Sbjct: 278 FHLLKDVPGLISKNIDKVLAEPLEYVHFPS--YNDMFWAVHPGGPAILDQIEAKLGLSTD 335
Query: 251 KLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEAI 310
K++ +R VL+ YGNM+SA+VLFVLD++RK S E TTGE EWG ++GF GLTVE +
Sbjct: 336 KMQASRDVLASYGNMSSASVLFVLDQIRKNSEELHLPTTGEGFEWGFVIGFGPGLTVETL 395
Query: 311 VLRSI 315
+LRSI
Sbjct: 396 LLRSI 400
>pdb|2P0U|A Chain A, Crystal Structure Of Marchantia Polymorpha
Stilbenecarboxylate Synthase 2 (Stcs2)
pdb|2P0U|B Chain B, Crystal Structure Of Marchantia Polymorpha
Stilbenecarboxylate Synthase 2 (Stcs2)
Length = 413
Score = 300 bits (769), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 162/368 (44%), Positives = 219/368 (59%), Gaps = 66/368 (17%)
Query: 14 QANPANCVYQTDYPDFYFRITSSNHMTELKEKFKRMY----------------------- 50
+A PAN Q YPDF+F IT+SN LK KF+R+
Sbjct: 42 KAVPANVFEQATYPDFFFNITNSNDKPALKAKFQRICDKSGIKKRHFYLDQKILESNPAM 101
Query: 51 -------------ILVPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQ 97
I V +VPKL KEA AIKEWG+P S+ITH++ + SGV+MPGA+
Sbjct: 102 CTYMETSLNCRQEIAVAQVPKLAKEASMNAIKEWGRPKSEITHIVMATTSGVNMPGAELA 161
Query: 98 LTKLLGLKPSVKRVML-----------------TAESNAGARVLVVCSEITVGTFRAPSD 140
KLLGL+P+V+RVM+ AE+NAGARVL +CSE+T TFRAPS+
Sbjct: 162 TAKLLGLRPNVRRVMMYQQGXFAGATVLRVAKDLAENNAGARVLAICSEVTAVTFRAPSE 221
Query: 141 ENLSCLVNRAIVGDGTAALIVGACPDINTERPLFHIVPTAQTILPDSEDAIKGHFRESPL 200
++ LV A+ GDG AA+IVG+ P ERP++ + + +LP+S+ AI GH E+ L
Sbjct: 222 THIDGLVGSALFGDGAAAVIVGSDPRPGIERPIYEMHWAGEMVLPESDGAIDGHLTEAGL 281
Query: 201 -----------IADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEK 249
I NI FL ++ + V + WN LFW +HP GPA+LDQ+E KL LEK
Sbjct: 282 VFHLLKDVPGLITKNIGGFLKDTKNLVGASS--WNELFWAVHPGGPAILDQVEAKLELEK 339
Query: 250 TKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEA 309
K + +R +LS+YGNM+SA+VLFVLD +R+RS+E K+T GE EWG L+GF GLTVE
Sbjct: 340 GKFQASRDILSDYGNMSSASVLFVLDRVRERSLESNKSTFGEGSEWGFLIGFGPGLTVET 399
Query: 310 IVLRSIPM 317
++LR++P+
Sbjct: 400 LLLRALPL 407
>pdb|3OV2|A Chain A, Curcumin Synthase 1 From Curcuma Longa
pdb|3OV2|B Chain B, Curcumin Synthase 1 From Curcuma Longa
pdb|3OV2|C Chain C, Curcumin Synthase 1 From Curcuma Longa
pdb|3OV2|D Chain D, Curcumin Synthase 1 From Curcuma Longa
Length = 393
Score = 293 bits (750), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 162/391 (41%), Positives = 219/391 (56%), Gaps = 76/391 (19%)
Query: 1 MALLGKFQETQRPQ----------ANPANCVYQTDYPDFYFRITSSNHMTELKEKFKRMY 50
MA L + QR Q A P N Q+ +PDFYFR+T+S+ ELK+KF+RM
Sbjct: 1 MANLHALRREQRAQGPATIMAIGTATPPNLYEQSTFPDFYFRVTNSDDKQELKKKFRRMC 60
Query: 51 ------------------------------------ILVPKVPKLGKEAVSKAIKEWGQP 74
I+V ++P+L KEA KAIKEWG+P
Sbjct: 61 EKTMVKKRYLHLTEEILKERPKLCSYKEASFDDRQDIVVEEIPRLAKEAAEKAIKEWGRP 120
Query: 75 ISKITHLISCSVSGVDMPGADYQLTKLLGLKPSVKRVMLT-----------------AES 117
S+ITHL+ CS+SG+DMPGADY+L LLGL +V R+M+ AE+
Sbjct: 121 KSEITHLVFCSISGIDMPGADYRLATLLGLPLTVNRLMIYSQACHMGAAMLRIAKDLAEN 180
Query: 118 NAGARVLVVCSEITVGTFRAPSDENLSCLVNRAIVGDGTAALIVGACPDINTERPLFHIV 177
N GARVLVV EITV +FR P++ + L +A GDG A++VGA P E+P++ I
Sbjct: 181 NRGARVLVVACEITVLSFRGPNEGDFEALAGQAGFGDGAGAVVVGADPLEGIEKPIYEIA 240
Query: 178 PTAQTILPDSEDAIKGHFRE-----------SPLIADNIDKFLAESFDQVSLNDHDWNSL 226
Q + +S+ A+ GH R +IADN+ + L + L +WN +
Sbjct: 241 AAMQETVAESQGAVGGHLRAFGWTFYFLNQLPAIIADNLGRSLERAL--APLGVREWNDV 298
Query: 227 FWMMHPIGPAVLDQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGK 286
FW+ HP A++D IE KL L KL RHV +EYGNM SATV FV+DE+RKRS EG+
Sbjct: 299 FWVAHPGNWAIIDAIEAKLQLSPDKLSTARHVFTEYGNMQSATVYFVMDELRKRSAVEGR 358
Query: 287 ATTGEELEWGVLLGFEAGLTVEAIVLRSIPM 317
+TTG+ L+WGVLLGF GL++E +VLRS+P+
Sbjct: 359 STTGDGLQWGVLLGFGPGLSIETVVLRSMPL 389
>pdb|3OV3|A Chain A, G211f Mutant Of Curcumin Synthase 1 From Curcuma Longa
pdb|3OV3|B Chain B, G211f Mutant Of Curcumin Synthase 1 From Curcuma Longa
pdb|3OV3|C Chain C, G211f Mutant Of Curcumin Synthase 1 From Curcuma Longa
pdb|3OV3|D Chain D, G211f Mutant Of Curcumin Synthase 1 From Curcuma Longa
Length = 393
Score = 292 bits (747), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 162/391 (41%), Positives = 219/391 (56%), Gaps = 76/391 (19%)
Query: 1 MALLGKFQETQRPQ----------ANPANCVYQTDYPDFYFRITSSNHMTELKEKFKRMY 50
MA L + QR Q A P N Q+ +PDFYFR+T+S+ ELK+KF+RM
Sbjct: 1 MANLHALRREQRAQGPATIMAIGTATPPNLYEQSTFPDFYFRVTNSDDKQELKKKFRRMC 60
Query: 51 ------------------------------------ILVPKVPKLGKEAVSKAIKEWGQP 74
I+V ++P+L KEA KAIKEWG+P
Sbjct: 61 EKTMVKKRYLHLTEEILKERPKLCSYKEASFDDRQDIVVEEIPRLAKEAAEKAIKEWGRP 120
Query: 75 ISKITHLISCSVSGVDMPGADYQLTKLLGLKPSVKRVMLT-----------------AES 117
S+ITHL+ CS+SG+DMPGADY+L LLGL +V R+M+ AE+
Sbjct: 121 KSEITHLVFCSISGIDMPGADYRLATLLGLPLTVNRLMIYSQACHMGAAMLRIAKDLAEN 180
Query: 118 NAGARVLVVCSEITVGTFRAPSDENLSCLVNRAIVGDGTAALIVGACPDINTERPLFHIV 177
N GARVLVV EITV +FR P++ + L +A GDG A++VGA P E+P++ I
Sbjct: 181 NRGARVLVVACEITVLSFRGPNEGDFEALAFQAGFGDGAGAVVVGADPLEGIEKPIYEIA 240
Query: 178 PTAQTILPDSEDAIKGHFRE-----------SPLIADNIDKFLAESFDQVSLNDHDWNSL 226
Q + +S+ A+ GH R +IADN+ + L + L +WN +
Sbjct: 241 AAMQETVAESQGAVGGHLRAFGWTFYFLNQLPAIIADNLGRSLERAL--APLGVREWNDV 298
Query: 227 FWMMHPIGPAVLDQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGK 286
FW+ HP A++D IE KL L KL RHV +EYGNM SATV FV+DE+RKRS EG+
Sbjct: 299 FWVAHPGNWAIIDAIEAKLQLSPDKLSTARHVFTEYGNMQSATVYFVMDELRKRSAVEGR 358
Query: 287 ATTGEELEWGVLLGFEAGLTVEAIVLRSIPM 317
+TTG+ L+WGVLLGF GL++E +VLRS+P+
Sbjct: 359 STTGDGLQWGVLLGFGPGLSIETVVLRSMPL 389
>pdb|2D3M|A Chain A, Pentaketide Chromone Synthase Complexed With Coenzyme A
pdb|2D3M|B Chain B, Pentaketide Chromone Synthase Complexed With Coenzyme A
Length = 406
Score = 286 bits (733), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 160/369 (43%), Positives = 214/369 (57%), Gaps = 65/369 (17%)
Query: 15 ANPANCVYQTDYPDFYFRITSSNHMTELKEKF----------KRMY-------------- 50
A+P + Q Y D YFR T+S H ELK+KF KR +
Sbjct: 38 AHPPHIFPQDTYADVYFRATNSEHKVELKKKFDHICKKTMIGKRYFNYDEEFLKKYPNIT 97
Query: 51 ------------ILVPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQL 98
I VP VP LG EA KAI+EWG+P S+ITHL+ C+ GVDMP AD+Q
Sbjct: 98 SYDEPSLNDRQDICVPGVPALGTEAAVKAIEEWGRPKSEITHLVFCTSCGVDMPSADFQC 157
Query: 99 TKLLGLKPSVKRVMLT-----------------AESNAGARVLVVCSEITVGTFRAPSDE 141
KLLGL +V + + AE+N GARVLVVC+E+T+ RAP++
Sbjct: 158 AKLLGLHANVNKYCIYMQGXYAGGTVMRYAKDLAENNRGARVLVVCAELTIMMLRAPNET 217
Query: 142 NLSCLVNRAIVGDGTAALIVGACPDINTERPLFHIVPTAQTILPDSEDAIKGHFRE---- 197
+L + ++ GDG AALI+G+ P I E+P+F IV T QT++P++ED I H RE
Sbjct: 218 HLDNAIGISLFGDGAAALIIGSDPIIGVEKPMFEIVCTKQTVIPNTEDVIHLHLRETGMM 277
Query: 198 ------SPL-IADNIDKFLAESFDQVSLND-HDWNSLFWMMHPIGPAVLDQIEGKLGLEK 249
SP+ I++N++ L + F V + DWNSLFW+ HP G A+LDQ+E KL L
Sbjct: 278 FYLSKGSPMTISNNVEACLIDVFKSVGITPPEDWNSLFWIPHPGGRAILDQVEAKLKLRP 337
Query: 250 TKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEA 309
K R R VL +YGNM SA+V ++LDEMR++S +G T GE LEWGVLLGF G+TVE
Sbjct: 338 EKFRAARTVLWDYGNMVSASVGYILDEMRRKSAAKGLETYGEGLEWGVLLGFGPGITVET 397
Query: 310 IVLRSIPMV 318
I+L S+P++
Sbjct: 398 ILLHSLPLM 406
>pdb|2D51|A Chain A, Pentaketide Chromone Synthase (M207g Mutant)
pdb|2D51|B Chain B, Pentaketide Chromone Synthase (M207g Mutant)
pdb|2D52|A Chain A, Pentaketide Chromone Synthase (M207g Mutant Complexed With
Coa)
pdb|2D52|B Chain B, Pentaketide Chromone Synthase (M207g Mutant Complexed With
Coa)
Length = 406
Score = 286 bits (733), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 160/369 (43%), Positives = 214/369 (57%), Gaps = 65/369 (17%)
Query: 15 ANPANCVYQTDYPDFYFRITSSNHMTELKEKF----------KRMY-------------- 50
A+P + Q Y D YFR T+S H ELK+KF KR +
Sbjct: 38 AHPPHIFPQDTYADVYFRATNSEHKVELKKKFDHICKKTMIGKRYFNYDEEFLKKYPNIT 97
Query: 51 ------------ILVPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQL 98
I VP VP LG EA KAI+EWG+P S+ITHL+ C+ GVDMP AD+Q
Sbjct: 98 SYDEPSLNDRQDICVPGVPALGTEAAVKAIEEWGRPKSEITHLVFCTSCGVDMPSADFQC 157
Query: 99 TKLLGLKPSVKRVMLT-----------------AESNAGARVLVVCSEITVGTFRAPSDE 141
KLLGL +V + + AE+N GARVLVVC+E+T+ RAP++
Sbjct: 158 AKLLGLHANVNKYCIYMQGXYAGGTVMRYAKDLAENNRGARVLVVCAELTIMGLRAPNET 217
Query: 142 NLSCLVNRAIVGDGTAALIVGACPDINTERPLFHIVPTAQTILPDSEDAIKGHFRE---- 197
+L + ++ GDG AALI+G+ P I E+P+F IV T QT++P++ED I H RE
Sbjct: 218 HLDNAIGISLFGDGAAALIIGSDPIIGVEKPMFEIVCTKQTVIPNTEDVIHLHLRETGMM 277
Query: 198 ------SPL-IADNIDKFLAESFDQVSLND-HDWNSLFWMMHPIGPAVLDQIEGKLGLEK 249
SP+ I++N++ L + F V + DWNSLFW+ HP G A+LDQ+E KL L
Sbjct: 278 FYLSKGSPMTISNNVEACLIDVFKSVGITPPEDWNSLFWIPHPGGRAILDQVEAKLKLRP 337
Query: 250 TKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEA 309
K R R VL +YGNM SA+V ++LDEMR++S +G T GE LEWGVLLGF G+TVE
Sbjct: 338 EKFRAARTVLWDYGNMVSASVGYILDEMRRKSAAKGLETYGEGLEWGVLLGFGPGITVET 397
Query: 310 IVLRSIPMV 318
I+L S+P++
Sbjct: 398 ILLHSLPLM 406
>pdb|3ALE|A Chain A, A Type Iii Polyketide Synthase That Produces
Diarylheptanoid
pdb|3ALE|B Chain B, A Type Iii Polyketide Synthase That Produces
Diarylheptanoid
pdb|3ALE|C Chain C, A Type Iii Polyketide Synthase That Produces
Diarylheptanoid
pdb|3ALE|D Chain D, A Type Iii Polyketide Synthase That Produces
Diarylheptanoid
Length = 416
Score = 243 bits (621), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 153/392 (39%), Positives = 214/392 (54%), Gaps = 79/392 (20%)
Query: 4 LGKFQETQRPQ----------ANPANCVYQTDYPDFYFRITSSNHMTELKEKFKRMY--- 50
LG+ + +QR ANP NCV Q + PDFYFR+T+S+H+T LK+KFKR+
Sbjct: 28 LGEMRRSQRADGLAAVLAIGTANPPNCVTQEEIPDFYFRVTNSDHLTALKDKFKRICQEM 87
Query: 51 ---------------------------------ILVPKVPKLGKEAVSKAIKEWGQPISK 77
I VP+L EA KAI EWG+P +
Sbjct: 88 GVQRRYLHHTEEMLSAHPEFVDRDAPSLDARLDIAADAVPELAAEAAKKAIAEWGRPAAD 147
Query: 78 ITHLISCSVSGVDMPGADYQLTKLLGLKPSVKRVML-----------------TAESNAG 120
ITHL+ + SG +PG D++L LLGL+PSV+R ML AE++ G
Sbjct: 148 ITHLVVTTNSGAHVPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGCAALRLAKDLAENSRG 207
Query: 121 ARVLVVCSEITVGTFRAPSDENLSCLVNRAIVGDGTAALIVGACPDINTERPLFHIVPTA 180
ARVLVV +E+T+ F P + L+ + + GDG AA+IVGA D + ERPLF IV A
Sbjct: 208 ARVLVVAAELTLMYFTGPDEGCFRTLLVQGLFGDGAAAVIVGADAD-DVERPLFEIVSAA 266
Query: 181 QTILPDSEDAIKGHF----------RESP-LIADNIDKFLAESFDQVSLNDHD--WNSLF 227
QTI+P+S+ A+ F R+ P LI DN+++ L + F + D WN LF
Sbjct: 267 QTIIPESDHALNMRFTERRLDGVLGRQVPGLIGDNVERCLLDMFGPLLGGDGGGGWNDLF 326
Query: 228 WMMHPIGPAVLDQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKA 287
W +HP ++DQ++ LGLE KL +R VLS+YGNM+ ATV+F LDE+R++ E A
Sbjct: 327 WAVHPGSSTIMDQVDAALGLEPGKLAASRRVLSDYGNMSGATVIFALDELRRQRKE--AA 384
Query: 288 TTGEELEWGVLLGFEAGLTVEAIVLRSIPMVS 319
GE E GV++ F G+TV+A++L + V+
Sbjct: 385 AAGEWPELGVMMAFGPGMTVDAMLLHATSHVN 416
>pdb|3OIT|A Chain A, Crystal Structure Of Curcuminoid Synthase Cus From Oryza
Sativa
pdb|3OIT|B Chain B, Crystal Structure Of Curcuminoid Synthase Cus From Oryza
Sativa
Length = 387
Score = 241 bits (616), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 148/366 (40%), Positives = 205/366 (56%), Gaps = 69/366 (18%)
Query: 15 ANPANCVYQTDYPDFYFRITSSNHMTELKEKFKRMY------------------------ 50
ANP NCV Q + PDFYFR+T+S+H+T LK+KFKR+
Sbjct: 19 ANPPNCVTQEEIPDFYFRVTNSDHLTALKDKFKRICQEMGVQRRYLHHTEEMLSAHPEFV 78
Query: 51 ------------ILVPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQL 98
I VP+L EA KAI EWG+P + ITHL+ + SG +PG D++L
Sbjct: 79 DRDAPSLDARLDIAADAVPELAAEAAKKAIAEWGRPAADITHLVVTTNSGAHVPGVDFRL 138
Query: 99 TKLLGLKPSVKRVML-----------------TAESNAGARVLVVCSEITVGTFRAPSDE 141
LLGL+PSV+R ML AE++ GARVLVV +E+T+ F P +
Sbjct: 139 VPLLGLRPSVRRTMLHLNGCFAGCAALRLAKDLAENSRGARVLVVAAELTLMYFTGPDEG 198
Query: 142 NLSCLVNRAIVGDGTAALIVGACPDINTERPLFHIVPTAQTILPDSEDAIKGHF------ 195
L+ + + GDG AA+IVGA D + ERPLF IV AQTI+P+S+ A+ F
Sbjct: 199 CFRTLLVQGLFGDGAAAVIVGADAD-DVERPLFEIVSAAQTIIPESDHALNMRFTERRLD 257
Query: 196 ----RESP-LIADNIDKFLAESFDQVSLNDHD--WNSLFWMMHPIGPAVLDQIEGKLGLE 248
R+ P LI DN+++ L + F + D WN LFW +HP ++DQ++ LGLE
Sbjct: 258 GVLGRQVPGLIGDNVERCLLDMFGPLLGGDGGGGWNDLFWAVHPGSSTIMDQVDAALGLE 317
Query: 249 KTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVE 308
KL +R VLS+YGNM+ ATV+F LDE+R++ E A GE E GV++ F G+TV+
Sbjct: 318 PGKLAASRRVLSDYGNMSGATVIFALDELRRQRKE--AAAAGEWPELGVMMAFGPGMTVD 375
Query: 309 AIVLRS 314
A++L +
Sbjct: 376 AMLLHA 381
>pdb|2H84|A Chain A, Crystal Structure Of The C-terminal Type Iii Polyketide
Synthase (pks Iii) Domain Of 'steely1' (a Type I/iii Pks
Hybrid From Dictyostelium)
pdb|2H84|B Chain B, Crystal Structure Of The C-terminal Type Iii Polyketide
Synthase (pks Iii) Domain Of 'steely1' (a Type I/iii Pks
Hybrid From Dictyostelium)
Length = 374
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 149/308 (48%), Gaps = 49/308 (15%)
Query: 39 MTELKEKFKRMYILVPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQL 98
+T++ +FK++ VP L ++A +A+K+WG ITH++S + +G+ +P +++L
Sbjct: 84 ITDVNNQFKKV------VPDLAQQACLRALKDWGGDKGDITHIVSVTSTGIIIPDVNFKL 137
Query: 99 TKLLGLKPSVKRVML-------------TAESNAGA----RVLVVCSEITVGTFRAPSDE 141
LLGL V+RV L TA S A A R+LVVC+E+ + + +
Sbjct: 138 IDLLGLNKDVERVSLNLMGCLAGLSSLRTAASLAKASPRNRILVVCTEVC--SLHFSNTD 195
Query: 142 NLSCLVNRAIVGDGTAALIVGACPDINTERPLFHIVPTAQTILPDSEDAIKGHFRESP-- 199
+V +I DG+AA I+G P I E PL+ ++ + P++E+A+ +
Sbjct: 196 GGDQMVASSIFADGSAAYIIGCNPRIE-ETPLYEVMCSINRSFPNTENAMVWDLEKEGWN 254
Query: 200 ---------LIADNIDKFLAESFDQVSLNDHDWNS---LFWMMHPIGPAVLDQIEGKLGL 247
+I I+ F+ D+ L S +++H G ++L IE LG+
Sbjct: 255 LGLDASIPIVIGSGIEAFVDTLLDKAKLQTSTAISAKDCEFLIHTGGKSILMNIENSLGI 314
Query: 248 EKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTV 307
+ + + T V YGNM+SA+V+FV+D RK + + + L F GL
Sbjct: 315 DPKQTKNTWDVYHAYGNMSSASVIFVMDHARK---------SKSLPTYSISLAFGPGLAF 365
Query: 308 EAIVLRSI 315
E L+++
Sbjct: 366 EGCFLKNV 373
>pdb|1TED|A Chain A, Crystal Structure Of A Type Iii Polyketide Synthase Pks18
From Mycobacterium Tuberculosis
pdb|1TED|B Chain B, Crystal Structure Of A Type Iii Polyketide Synthase Pks18
From Mycobacterium Tuberculosis
pdb|1TED|C Chain C, Crystal Structure Of A Type Iii Polyketide Synthase Pks18
From Mycobacterium Tuberculosis
pdb|1TED|D Chain D, Crystal Structure Of A Type Iii Polyketide Synthase Pks18
From Mycobacterium Tuberculosis
Length = 393
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 135/293 (46%), Gaps = 37/293 (12%)
Query: 48 RMYILVPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPS 107
RM++ L + +A+ ++I L+ + +G PG D + K LGL PS
Sbjct: 105 RMHLFYEHAVPLAVDVSKRALAGLPYRAAEIGLLVLATSTGFIAPGVDVAIVKELGLSPS 164
Query: 108 VKRVMLTAESNAGA-----------------RVLVVCSEITVGTFRAPSDENLSCLVNRA 150
+ RV++ A A + LVVC E+ + A ++++ +V +
Sbjct: 165 ISRVVVNFMGCAAAMNALGTATNYVRAHPAMKALVVCIELC--SVNAVFADDINDVVIHS 222
Query: 151 IVGDGTAALIVGACPDINTERPLFHIVPTA-QTILPDSEDAIK---GHFRESPLIADNID 206
+ GDG AAL++GA P +V ++ +L ++ED I H + +++N+
Sbjct: 223 LFGDGCAALVIGASQVQEKLEPGKVVVRSSFSQLLDNTEDGIVLGVNHNGITCELSENLP 282
Query: 207 KFLAESFDQVSLNDHDW-NSL------FWMMHPIGPAVLDQIEGKLGLEKTKLRETRHVL 259
++ V + + W N L W +HP GP +++Q LG+ ++ VL
Sbjct: 283 GYIFSGVAPV-VTEMLWDNGLQISDIDLWAIHPGGPKIIEQSVRSLGISAELAAQSWDVL 341
Query: 260 SEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEAIVL 312
+ +GNM S +++FVL+ M + +A + + + GV F G+TVE ++
Sbjct: 342 ARFGNMLSVSLIFVLETMVQ------QAESAKAISTGVAFAFGPGVTVEGMLF 388
>pdb|1TEE|A Chain A, Crystal Structure Of C205f Mutant Of Pks18 From
Mycobacterium Tuberculosis
pdb|1TEE|B Chain B, Crystal Structure Of C205f Mutant Of Pks18 From
Mycobacterium Tuberculosis
pdb|1TEE|C Chain C, Crystal Structure Of C205f Mutant Of Pks18 From
Mycobacterium Tuberculosis
pdb|1TEE|D Chain D, Crystal Structure Of C205f Mutant Of Pks18 From
Mycobacterium Tuberculosis
Length = 393
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 135/293 (46%), Gaps = 37/293 (12%)
Query: 48 RMYILVPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPS 107
RM++ L + +A+ ++I L+ + +G PG D + K LGL PS
Sbjct: 105 RMHLFYEHAVPLAVDVSKRALAGLPYRAAEIGLLVLATSTGFIAPGVDVAIVKELGLSPS 164
Query: 108 VKRVMLTAESNAGA-----------------RVLVVCSEITVGTFRAPSDENLSCLVNRA 150
+ RV++ A A + LVVC E+ + A ++++ +V +
Sbjct: 165 ISRVVVNFMGCAAAMNALGTATNYVRAHPAMKALVVCIELF--SVNAVFADDINDVVIHS 222
Query: 151 IVGDGTAALIVGACPDINTERPLFHIVPTA-QTILPDSEDAIK---GHFRESPLIADNID 206
+ GDG AAL++GA P +V ++ +L ++ED I H + +++N+
Sbjct: 223 LFGDGCAALVIGASQVQEKLEPGKVVVRSSFSQLLDNTEDGIVLGVNHNGITCELSENLP 282
Query: 207 KFLAESFDQVSLNDHDW-NSL------FWMMHPIGPAVLDQIEGKLGLEKTKLRETRHVL 259
++ V + + W N L W +HP GP +++Q LG+ ++ VL
Sbjct: 283 GYIFSGVAPV-VTEMLWDNGLQISDIDLWAIHPGGPKIIEQSVRSLGISAELAAQSWDVL 341
Query: 260 SEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEAIVL 312
+ +GNM S +++FVL+ M + +A + + + GV F G+TVE ++
Sbjct: 342 ARFGNMLSVSLIFVLETMVQ------QAESAKAISTGVAFAFGPGVTVEGMLF 388
>pdb|3EUQ|A Chain A, X-Ray Structural Of A Type Iii Pentaketide Synthase From
Neurospora Crassa
pdb|3EUQ|B Chain B, X-Ray Structural Of A Type Iii Pentaketide Synthase From
Neurospora Crassa
pdb|3EUQ|C Chain C, X-Ray Structural Of A Type Iii Pentaketide Synthase From
Neurospora Crassa
pdb|3EUQ|D Chain D, X-Ray Structural Of A Type Iii Pentaketide Synthase From
Neurospora Crassa
Length = 379
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 128/299 (42%), Gaps = 49/299 (16%)
Query: 59 LGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPSVKRVMLTAESN 118
L EA KA+ E ++ITH++S + + PG D+ + K LGL +++V+L
Sbjct: 84 LAVEASRKAMAEARLVPAQITHMVSTTCTDSANPGYDHYVAKELGLSDRLEKVLLHGIGX 143
Query: 119 AG---------------------ARVLVVCSEITVGTFRAPSDENLSCL----VNRAIVG 153
+G AR+LV+ E++ R+ E++ L + A+
Sbjct: 144 SGGLAALRTAANLCLGHTARGKPARILVLALEVSTTMVRS-ELESIDALQETRIGIALFS 202
Query: 154 DGTAALI----VGACPDINTERPLFHIVPTAQTILPDSEDAIKGHFR----------ESP 199
D +A+I +G P + ++ ++ ++PDSE + G P
Sbjct: 203 DCASAVILSNGIGEAPG---KPAIYDLLGWENRVIPDSEHDLGGDVDPMGWKVVLSPRVP 259
Query: 200 LIAD-----NIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKTKLRE 254
++A L+ DQ+ + W MHP G +L E +GL +R
Sbjct: 260 VLAKASLQPTYADLLSSLQDQLPSSYQKPADFDWAMHPGGATILSGAESAMGLTPEHMRA 319
Query: 255 TRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEAIVLR 313
+ +GN +SAT+ VL+ +R++ + + A G+ E+ V F G+ VE +L+
Sbjct: 320 SYDRYINHGNSSSATIFSVLNRLREKDM-DALAPGGKVKEYVVGCAFGPGINVEMCMLK 377
>pdb|3EUO|A Chain A, Crystal Structure Of A Fungal Type Iii Polyketide
Synthase, Oras
pdb|3EUO|B Chain B, Crystal Structure Of A Fungal Type Iii Polyketide
Synthase, Oras
pdb|3EUT|A Chain A, X-Ray Crystal Structure Of A Type Iii Pentaketide Synthase
From Neurospora Crassa
pdb|3EUT|B Chain B, X-Ray Crystal Structure Of A Type Iii Pentaketide Synthase
From Neurospora Crassa
pdb|3EUT|C Chain C, X-Ray Crystal Structure Of A Type Iii Pentaketide Synthase
From Neurospora Crassa
pdb|3EUT|D Chain D, X-Ray Crystal Structure Of A Type Iii Pentaketide Synthase
From Neurospora Crassa
Length = 379
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 127/301 (42%), Gaps = 53/301 (17%)
Query: 59 LGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPSVKRVMLTAESN 118
L EA KA+ E ++ITH++S + + PG D+ + K LGL +++V+L
Sbjct: 84 LAVEASRKAMAEARLVPAQITHMVSTTCTDSANPGYDHYVAKELGLSDRLEKVLLHGIGX 143
Query: 119 AG---------------------ARVLVVCSEITVGTFRAPSDENLSCL----VNRAIVG 153
+G AR+LV+ E++ R+ E++ L + A+
Sbjct: 144 SGGLAALRTAANLCLGHTARGKPARILVLALEVSTTMVRS-ELESIDALQETRIGIALFS 202
Query: 154 DGTAALI----VGACPDINTERPLFHIVPTAQTILPDSEDAIKGHFRESPL--------- 200
D +A+I +G P + ++ ++ ++PDSE + F P+
Sbjct: 203 DCASAVILSNGIGEAPG---KPAIYDLLGWENRVIPDSEHDLG--FDVDPMGWKVVLSPR 257
Query: 201 --------IADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKTKL 252
+ L+ DQ+ + W MHP G +L E +GL +
Sbjct: 258 VPVLAKASLQPTYADLLSSLQDQLPSSYQKPADFDWAMHPGGATILSGAESAMGLTPEHM 317
Query: 253 RETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEAIVL 312
R + +GN +SAT+ VL+ +R++ + + A G+ E+ V F G+ VE +L
Sbjct: 318 RASYDRYINHGNSSSATIFSVLNRLREKDM-DALAPGGKVKEYVVGCAFGPGINVEMCML 376
Query: 313 R 313
+
Sbjct: 377 K 377
>pdb|1U0M|A Chain A, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene
Synthase (Thns) From Streptomyces Coelicolor A3(2): A
Bacterial Type Iii Polyketide Synthase (Pks) Provides
Insights Into Enzymatic Control Of Reactive Polyketide
Intermediates
pdb|1U0M|B Chain B, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene
Synthase (Thns) From Streptomyces Coelicolor A3(2): A
Bacterial Type Iii Polyketide Synthase (Pks) Provides
Insights Into Enzymatic Control Of Reactive Polyketide
Intermediates
Length = 382
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 116/267 (43%), Gaps = 32/267 (11%)
Query: 64 VSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPSVKRVMLTAESNAG--- 120
+ +A+ + + I +I S +G MP L +G + +++ + A
Sbjct: 92 IQRALDDAELLATDIDVIIYVSCTGFMMPSLTAWLINEMGFDSTTRQIPIAQLGCAAGGA 151
Query: 121 --------------ARVLVVCSEITVGTFRAPSDENLSCLVNRAIVGDGTAALIVGA--C 164
A L+V E ++ P+D + L+ + GDG AA +V
Sbjct: 152 AINRAHDFCTAYPEANALIVACEFCSLCYQ-PTDLGVGSLLCNGLFGDGIAAAVVRGRGG 210
Query: 165 PDINTERPLFHIVPTAQTILPDSEDAIKGHFRESPLIADNIDKFLAESFDQVSLNDHDWN 224
+ ER +++P + + A HF + ++ LA + +++ +H W+
Sbjct: 211 TGVRLERNGSYLIPKTEDWIMYDVKATGFHFLLDKRVPATMEP-LAPALKELA-GEHGWD 268
Query: 225 SL---FWMMHPIGPAVLDQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRS 281
+ F+++H GP +LD + L ++ R +R L+EYGN+ASA VL L +R
Sbjct: 269 ASDLDFYIVHAGGPRILDDLSTFLEVDPHAFRFSRATLTEYGNIASAVVLDAL----RRL 324
Query: 282 VEEGKATTGEELEWGVLLGFEAGLTVE 308
+EG EE G+L GF G+T E
Sbjct: 325 FDEGGV---EEGARGLLAGFGPGITAE 348
>pdb|3E1H|A Chain A, Crystal Structure Of A Type Iii Polyketide Synthase
Pksiiinc From Neurospora Crassa
pdb|3E1H|B Chain B, Crystal Structure Of A Type Iii Polyketide Synthase
Pksiiinc From Neurospora Crassa
Length = 465
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 134/319 (42%), Gaps = 59/319 (18%)
Query: 41 ELKEKFKRMYILVPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTK 100
EL E F M VP L EA KA+ E ++ITH++S + + PG D+ + K
Sbjct: 101 ELHEVF--MSDGVP----LAVEASRKAMAEARLVPAQITHMVSTTCTDSANPGYDHYVAK 154
Query: 101 LLGLKPSVKRVMLTAESNAG---------------------ARVLVVCSEITVGTFRAPS 139
LGL +++V+L +G AR+LV+ E++ R+
Sbjct: 155 ELGLSDRLEKVLLHGIGCSGGLAALRTAANLCLGHTARGKPARILVLALEVSTTMVRS-E 213
Query: 140 DENLSCL----VNRAIVGDGTAALI----VGACPDINTERPLFHIVPTAQTILPDSEDAI 191
E++ L + A+ D +A+I +G P + ++ ++ ++PDSE +
Sbjct: 214 LESIDALQETRIGIALFSDCASAVILSNGIGEAPG---KPAIYDLLGWENRVIPDSEHDL 270
Query: 192 KGHFRESPL-----------------IADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIG 234
F P+ + L+ DQ+ + W MHP G
Sbjct: 271 G--FDVDPMGWKVVLSPRVPVLAKASLQPTYADLLSSLQDQLPSSYQKPADFDWAMHPGG 328
Query: 235 PAVLDQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEELE 294
+L E +GL +R + +GN +SAT+ VL+ +R++ + + A G+ E
Sbjct: 329 ATILSGAESAMGLTPEHMRASYDRYINHGNSSSATIFSVLNRLREKDM-DALAPGGKVKE 387
Query: 295 WGVLLGFEAGLTVEAIVLR 313
+ V F G+ VE +L+
Sbjct: 388 YVVGCAFGPGINVEMCMLK 406
>pdb|3IL6|A Chain A, Structure Of E. Faecalis Fabh In Complex With 2-({4-[(3r,
5s)-3,5-Dimethylpiperidin-1-Yl]-3-Phenoxybenzoyl}amino)
Benzoic Acid
Length = 321
Score = 35.0 bits (79), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 227 FWMMHPIGPAVLDQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGK 286
+ ++H ++D+I K + + K + +YGN ++A++ +LDE +VE G
Sbjct: 242 YLLLHQANVRIIDKIARKTKISREKFLTN---MDKYGNTSAASIPILLDE----AVENGT 294
Query: 287 ATTGEELEWGVLLGFEAGLTVEAIVL 312
G + + VL GF GLT +++L
Sbjct: 295 LILGSQ-QRVVLTGFGGGLTWGSLLL 319
>pdb|3IL4|A Chain A, Structure Of E. Faecalis Fabh In Complex With Acetyl Coa
pdb|3IL4|B Chain B, Structure Of E. Faecalis Fabh In Complex With Acetyl Coa
pdb|3IL4|C Chain C, Structure Of E. Faecalis Fabh In Complex With Acetyl Coa
pdb|3IL4|D Chain D, Structure Of E. Faecalis Fabh In Complex With Acetyl Coa
Length = 320
Score = 35.0 bits (79), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 227 FWMMHPIGPAVLDQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGK 286
+ ++H ++D+I K + + K + +YGN ++A++ +LDE +VE G
Sbjct: 241 YLLLHQASVRIIDKIARKTKISREKFLTN---MDKYGNTSAASIPILLDE----AVENGT 293
Query: 287 ATTGEELEWGVLLGFEAGLTVEAIVL 312
G + + VL GF GLT +++L
Sbjct: 294 LILGSQ-QRVVLTGFGGGLTWGSLLL 318
>pdb|3IL5|A Chain A, Structure Of E. Faecalis Fabh In Complex With
2-({4-Bromo-3-
[(Diethylamino)sulfonyl]benzoyl}amino)benzoic Acid
pdb|3IL5|B Chain B, Structure Of E. Faecalis Fabh In Complex With
2-({4-Bromo-3-
[(Diethylamino)sulfonyl]benzoyl}amino)benzoic Acid
pdb|3IL5|C Chain C, Structure Of E. Faecalis Fabh In Complex With
2-({4-Bromo-3-
[(Diethylamino)sulfonyl]benzoyl}amino)benzoic Acid
pdb|3IL5|D Chain D, Structure Of E. Faecalis Fabh In Complex With
2-({4-Bromo-3-
[(Diethylamino)sulfonyl]benzoyl}amino)benzoic Acid
Length = 343
Score = 35.0 bits (79), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 227 FWMMHPIGPAVLDQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGK 286
+ ++H ++D+I K + + K + +YGN ++A++ +LDE +VE G
Sbjct: 262 YLLLHQANVRIIDKIARKTKISREKFLTN---MDKYGNTSAASIPILLDE----AVENGT 314
Query: 287 ATTGEELEWGVLLGFEAGLTVEAIVL 312
G + + VL GF GLT +++L
Sbjct: 315 LILGSQ-QRVVLTGFGGGLTWGSLLL 339
>pdb|1FIO|A Chain A, Crystal Structure Of Yeast T-Snare Protein Sso1
Length = 196
Score = 31.2 bits (69), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Query: 31 FRITSSNHMTELKEKFKRMYILVPKVPKLGKEAVSKAIKEWG 72
+RI SN+ E KE+ KR Y+++ P+ ++ V AI + G
Sbjct: 100 YRIVDSNYKEENKEQAKRQYMIIQ--PEATEDEVEAAISDVG 139
>pdb|2GE9|A Chain A, Solution Structures Of The Sh2 Domain Of Bruton's Tyrosine
Kinase
Length = 125
Score = 27.7 bits (60), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 29/71 (40%), Gaps = 11/71 (15%)
Query: 36 SNHMTE------LKEKFKRMYILVPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSGV 89
S HMT LK++ K +V K GK VS K G P I H + CS
Sbjct: 15 SKHMTRSQAEQLLKQEGKEGGFIVRDSSKAGKYTVSVFAKSTGDPQGVIRHYVVCST--- 71
Query: 90 DMPGADYQLTK 100
P + Y L +
Sbjct: 72 --PQSQYYLAE 80
>pdb|4AIE|A Chain A, Structure Of Glucan-1,6-Alpha-Glucosidase From
Lactobacillus Acidophilus Ncfm
Length = 549
Score = 27.7 bits (60), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 12/19 (63%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
Query: 220 DHDWNSLFWMMHPIGPAVL 238
DH WNSLFW H I P V+
Sbjct: 306 DHAWNSLFWENHDI-PRVI 323
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.134 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,372,732
Number of Sequences: 62578
Number of extensions: 378558
Number of successful extensions: 1122
Number of sequences better than 100.0: 44
Number of HSP's better than 100.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 981
Number of HSP's gapped (non-prelim): 71
length of query: 320
length of database: 14,973,337
effective HSP length: 99
effective length of query: 221
effective length of database: 8,778,115
effective search space: 1939963415
effective search space used: 1939963415
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 51 (24.3 bits)