Query 047978
Match_columns 320
No_of_seqs 131 out of 1567
Neff 8.6
Searched_HMMs 46136
Date Fri Mar 29 05:05:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047978.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/047978hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0332 FabH 3-oxoacyl-[acyl-c 100.0 8.6E-59 1.9E-63 420.1 17.6 287 5-315 2-323 (323)
2 PLN03169 chalcone synthase fam 100.0 2.3E-51 5E-56 387.1 22.0 301 6-315 21-389 (391)
3 PLN03172 chalcone synthase fam 100.0 7E-50 1.5E-54 376.2 26.2 307 6-316 16-388 (393)
4 PLN03170 chalcone synthase; Pr 100.0 2.1E-49 4.5E-54 374.2 26.1 308 6-317 20-393 (401)
5 PLN03168 chalcone synthase; Pr 100.0 1.6E-48 3.5E-53 367.1 26.3 307 6-316 15-387 (389)
6 PLN03173 chalcone synthase; Pr 100.0 1.6E-48 3.4E-53 366.8 24.8 306 6-315 16-387 (391)
7 PLN03171 chalcone synthase-lik 100.0 1.9E-48 4.1E-53 368.0 23.0 300 6-316 22-396 (399)
8 PRK12880 3-oxoacyl-(acyl carri 100.0 1.3E-48 2.9E-53 364.2 19.4 286 4-318 5-342 (353)
9 PRK05963 3-oxoacyl-(acyl carri 100.0 1.1E-48 2.3E-53 362.5 18.3 284 6-314 3-326 (326)
10 cd00831 CHS_like Chalcone and 100.0 7.3E-48 1.6E-52 361.6 20.9 293 7-312 2-361 (361)
11 PLN02326 3-oxoacyl-[acyl-carri 100.0 3E-47 6.6E-52 358.9 18.3 285 6-314 47-379 (379)
12 PRK07204 3-oxoacyl-(acyl carri 100.0 1.1E-46 2.4E-51 349.3 19.6 285 5-314 3-329 (329)
13 CHL00203 fabH 3-oxoacyl-acyl-c 100.0 8.4E-47 1.8E-51 349.7 18.5 284 7-315 3-326 (326)
14 PRK12879 3-oxoacyl-(acyl carri 100.0 1.5E-46 3.3E-51 347.8 18.2 287 5-315 3-325 (325)
15 PRK09258 3-oxoacyl-(acyl carri 100.0 1.1E-45 2.4E-50 344.0 18.3 292 5-314 4-338 (338)
16 PRK04262 hypothetical protein; 100.0 3.7E-44 8E-49 334.5 19.0 279 6-316 2-310 (347)
17 PRK06840 hypothetical protein; 100.0 4E-44 8.7E-49 333.6 18.6 289 6-317 4-338 (339)
18 cd00830 KAS_III Ketoacyl-acyl 100.0 3.7E-44 8E-49 331.1 16.5 283 6-312 1-320 (320)
19 TIGR00748 HMG_CoA_syn_Arc hydr 100.0 1.1E-43 2.4E-48 330.6 18.6 285 6-316 1-309 (345)
20 PRK09352 3-oxoacyl-(acyl carri 100.0 1.4E-43 3.1E-48 327.1 18.3 288 4-315 1-319 (319)
21 TIGR00747 fabH 3-oxoacyl-(acyl 100.0 1.6E-43 3.6E-48 326.7 18.1 285 6-314 2-318 (318)
22 COG3424 BcsA Predicted naringe 100.0 7.7E-42 1.7E-46 297.9 21.7 297 7-316 2-354 (356)
23 PRK06816 3-oxoacyl-(acyl carri 100.0 2E-42 4.3E-47 326.1 16.6 292 6-315 2-378 (378)
24 PRK07515 3-oxoacyl-(acyl carri 100.0 6.6E-41 1.4E-45 315.5 16.7 287 5-314 1-371 (372)
25 PLN02932 3-ketoacyl-CoA syntha 100.0 7.4E-40 1.6E-44 311.4 20.5 298 5-316 66-455 (478)
26 PLN02377 3-ketoacyl-CoA syntha 100.0 7.5E-39 1.6E-43 306.2 23.0 300 5-316 96-479 (502)
27 PLN02854 3-ketoacyl-CoA syntha 100.0 2.8E-38 6E-43 302.3 23.7 299 6-317 113-496 (521)
28 cd00827 init_cond_enzymes "ini 100.0 6.2E-39 1.3E-43 296.7 18.5 284 6-312 1-324 (324)
29 TIGR01835 HMG-CoA-S_prok 3-hyd 100.0 6.8E-39 1.5E-43 301.8 18.7 279 7-317 1-320 (379)
30 PLN02192 3-ketoacyl-CoA syntha 100.0 1.4E-37 2.9E-42 296.9 21.5 299 6-317 101-484 (511)
31 PLN00415 3-ketoacyl-CoA syntha 100.0 7.6E-37 1.7E-41 287.5 22.2 298 5-316 58-441 (466)
32 PLN02577 hydroxymethylglutaryl 100.0 1.6E-37 3.4E-42 294.9 17.7 283 6-317 4-373 (459)
33 COG3425 PksG 3-hydroxy-3-methy 100.0 1.5E-35 3.3E-40 269.4 17.9 289 6-316 2-312 (377)
34 TIGR01833 HMG-CoA-S_euk 3-hydr 100.0 9.6E-34 2.1E-38 268.7 17.9 290 6-317 1-376 (454)
35 cd00327 cond_enzymes Condensin 99.9 6.4E-27 1.4E-31 208.9 13.3 222 55-312 6-254 (254)
36 cd00825 decarbox_cond_enzymes 99.9 5E-25 1.1E-29 204.3 10.5 239 56-312 11-332 (332)
37 PF00195 Chal_sti_synt_N: Chal 99.9 1.6E-24 3.4E-29 187.1 12.5 159 5-165 13-226 (226)
38 PF02797 Chal_sti_synt_C: Chal 99.9 8.6E-23 1.9E-27 166.8 11.4 140 175-316 1-151 (151)
39 PF08541 ACP_syn_III_C: 3-Oxoa 99.9 2.7E-22 5.8E-27 150.9 7.3 90 213-314 1-90 (90)
40 PF01154 HMG_CoA_synt_N: Hydro 99.7 8E-19 1.7E-23 144.6 3.8 149 5-165 3-173 (174)
41 KOG1393 Hydroxymethylglutaryl- 99.7 4.7E-17 1E-21 146.3 12.2 288 6-316 11-378 (462)
42 PF08392 FAE1_CUT1_RppA: FAE1/ 99.7 7.4E-17 1.6E-21 143.3 13.2 159 5-167 7-209 (290)
43 TIGR02845 spore_V_AD stage V s 99.7 6.7E-16 1.4E-20 139.0 18.3 234 53-306 47-307 (327)
44 PRK06147 3-oxoacyl-(acyl carri 99.7 4E-16 8.7E-21 145.6 15.1 294 3-315 1-343 (348)
45 PRK08304 stage V sporulation p 99.6 1E-14 2.3E-19 131.6 17.7 234 52-306 52-314 (337)
46 cd00751 thiolase Thiolase are 99.4 3.8E-12 8.3E-17 120.6 16.1 240 52-313 18-385 (386)
47 PRK05656 acetyl-CoA acetyltran 99.4 5.4E-12 1.2E-16 119.7 17.1 241 52-314 22-392 (393)
48 PRK09051 beta-ketothiolase; Pr 99.4 1.1E-11 2.3E-16 117.6 17.6 82 52-133 23-122 (394)
49 PRK12404 stage V sporulation p 99.4 1.6E-11 3.4E-16 110.5 16.5 235 53-306 51-312 (334)
50 PRK06064 acetyl-CoA acetyltran 99.4 1.6E-11 3.4E-16 116.6 17.5 242 52-304 18-376 (389)
51 TIGR01930 AcCoA-C-Actrans acet 99.4 7.6E-12 1.6E-16 118.5 15.3 239 53-313 18-386 (386)
52 cd00834 KAS_I_II Beta-ketoacyl 99.4 8.9E-12 1.9E-16 118.8 14.1 243 55-312 70-406 (406)
53 cd00829 SCP-x_thiolase Thiolas 99.4 5.2E-11 1.1E-15 112.5 19.0 241 53-304 13-367 (375)
54 smart00825 PKS_KS Beta-ketoacy 99.3 2.7E-11 5.9E-16 116.2 15.5 247 56-313 87-422 (424)
55 PRK09052 acetyl-CoA acetyltran 99.3 6.9E-11 1.5E-15 112.2 16.6 240 53-314 28-398 (399)
56 PRK05790 putative acyltransfer 99.3 1.2E-10 2.7E-15 110.6 17.4 240 53-314 23-392 (393)
57 PRK12578 acetyl-CoA acetyltran 99.3 2.2E-10 4.7E-15 108.7 18.1 224 52-282 17-351 (385)
58 PRK06205 acetyl-CoA acetyltran 99.3 2.1E-10 4.6E-15 109.3 16.9 80 53-132 23-119 (404)
59 PRK08313 acetyl-CoA acetyltran 99.3 3.7E-10 8.1E-15 106.9 17.8 247 52-310 20-378 (386)
60 PRK08242 acetyl-CoA acetyltran 99.2 4.1E-10 8.8E-15 106.8 17.3 82 52-133 24-123 (402)
61 PRK08235 acetyl-CoA acetyltran 99.2 2.9E-10 6.2E-15 107.9 16.0 82 52-133 22-120 (393)
62 PRK07108 acetyl-CoA acetyltran 99.2 2.8E-10 6E-15 107.9 15.2 82 52-133 23-122 (392)
63 PRK06059 lipid-transfer protei 99.2 1.4E-09 2.9E-14 103.7 18.5 254 53-313 20-398 (399)
64 TIGR03150 fabF beta-ketoacyl-a 99.2 9.4E-10 2E-14 105.0 16.1 243 56-313 71-407 (407)
65 cd00828 elong_cond_enzymes "el 99.2 8E-10 1.7E-14 105.6 15.3 240 55-312 71-407 (407)
66 PRK06158 thiolase; Provisional 99.2 2E-09 4.2E-14 102.0 17.5 236 52-303 24-368 (384)
67 PRK06289 acetyl-CoA acetyltran 99.1 1.3E-09 2.9E-14 103.9 16.0 255 47-306 17-394 (403)
68 PRK06445 acetyl-CoA acetyltran 99.1 1.6E-09 3.6E-14 102.9 16.4 240 53-314 29-393 (394)
69 PRK06954 acetyl-CoA acetyltran 99.1 9.6E-10 2.1E-14 104.5 14.8 81 52-132 27-124 (397)
70 PRK06065 acetyl-CoA acetyltran 99.1 1.6E-08 3.4E-13 95.9 20.7 222 52-282 25-358 (392)
71 PRK06501 3-oxoacyl-(acyl carri 99.1 2.5E-09 5.5E-14 102.6 15.0 245 56-316 75-424 (425)
72 PRK07661 acetyl-CoA acetyltran 99.1 5.5E-09 1.2E-13 99.1 17.0 81 53-133 24-122 (391)
73 PLN02287 3-ketoacyl-CoA thiola 99.0 9.5E-09 2.1E-13 98.9 17.1 245 52-316 67-436 (452)
74 cd00833 PKS polyketide synthas 99.0 3.5E-09 7.6E-14 101.4 13.3 210 55-278 86-359 (421)
75 PRK08256 lipid-transfer protei 99.0 2.2E-08 4.7E-13 95.2 17.8 242 53-306 19-382 (391)
76 PRK07851 acetyl-CoA acetyltran 99.0 1E-08 2.2E-13 97.8 15.4 80 53-132 24-121 (406)
77 PRK07314 3-oxoacyl-(acyl carri 99.0 1.1E-08 2.4E-13 97.9 15.1 248 56-314 72-409 (411)
78 PRK07516 acetyl-CoA acetyltran 99.0 2.2E-08 4.9E-13 95.0 16.9 220 52-282 18-354 (389)
79 PRK09185 3-oxoacyl-(acyl carri 99.0 4.9E-08 1.1E-12 92.8 17.9 199 93-314 138-390 (392)
80 PLN02644 acetyl-CoA C-acetyltr 98.9 5.6E-08 1.2E-12 92.4 16.9 98 207-314 295-392 (394)
81 PRK05952 3-oxoacyl-(acyl carri 98.9 7.7E-08 1.7E-12 90.9 15.6 289 4-313 1-380 (381)
82 PRK07103 polyketide beta-ketoa 98.9 5.3E-08 1.1E-12 93.2 14.3 241 56-313 80-409 (410)
83 PRK07850 acetyl-CoA acetyltran 98.9 1.5E-07 3.3E-12 89.2 17.3 240 53-314 23-386 (387)
84 PRK06633 acetyl-CoA acetyltran 98.8 8.2E-08 1.8E-12 90.9 15.0 81 53-133 24-121 (392)
85 PRK06025 acetyl-CoA acetyltran 98.8 1E-07 2.2E-12 90.5 15.5 81 53-133 26-124 (417)
86 PRK06690 acetyl-CoA acetyltran 98.8 1.6E-07 3.5E-12 88.0 16.6 210 53-280 22-336 (361)
87 PRK06066 acetyl-CoA acetyltran 98.8 5.2E-07 1.1E-11 85.3 19.5 222 52-282 21-352 (385)
88 PRK13359 beta-ketoadipyl CoA t 98.8 1.8E-07 3.9E-12 88.9 15.7 81 53-133 23-122 (400)
89 PRK08142 acetyl-CoA acetyltran 98.8 3.4E-07 7.4E-12 86.7 17.4 238 52-304 21-373 (388)
90 PRK06333 3-oxoacyl-(acyl carri 98.8 1.6E-07 3.4E-12 90.3 15.2 243 56-314 82-421 (424)
91 PRK08257 acetyl-CoA acetyltran 98.8 2.3E-07 5E-12 90.6 16.4 248 55-316 26-399 (498)
92 PRK08131 acetyl-CoA acetyltran 98.8 2.3E-07 4.9E-12 88.3 16.0 81 53-133 23-121 (401)
93 PRK06365 acetyl-CoA acetyltran 98.8 4.5E-07 9.7E-12 87.1 17.9 228 53-282 34-389 (430)
94 TIGR02430 pcaF beta-ketoadipyl 98.8 1.7E-07 3.7E-12 89.1 14.8 81 53-133 22-121 (400)
95 PRK09050 beta-ketoadipyl CoA t 98.8 1.9E-07 4.1E-12 88.9 14.8 81 53-133 23-122 (401)
96 PF08545 ACP_syn_III: 3-Oxoacy 98.7 8.5E-09 1.9E-13 75.4 4.0 53 108-166 6-66 (80)
97 PTZ00050 3-oxoacyl-acyl carrie 98.7 4.2E-07 9.1E-12 87.3 15.9 249 55-314 76-420 (421)
98 PRK06366 acetyl-CoA acetyltran 98.7 6.6E-07 1.4E-11 84.9 16.8 80 53-132 23-119 (388)
99 PRK08439 3-oxoacyl-(acyl carri 98.7 4.2E-07 9E-12 86.9 15.6 236 56-314 72-405 (406)
100 PRK08963 fadI 3-ketoacyl-CoA t 98.7 7.5E-07 1.6E-11 85.6 16.7 82 52-133 25-123 (428)
101 PRK06157 acetyl-CoA acetyltran 98.7 1.7E-06 3.7E-11 82.4 18.4 226 52-282 23-362 (398)
102 PRK07801 acetyl-CoA acetyltran 98.7 7.7E-07 1.7E-11 84.4 15.8 99 206-314 283-381 (382)
103 PLN02836 3-oxoacyl-[acyl-carri 98.6 1E-06 2.2E-11 85.0 16.1 245 56-316 93-437 (437)
104 PRK06504 acetyl-CoA acetyltran 98.6 2.1E-06 4.6E-11 81.4 17.6 81 53-133 23-121 (390)
105 PRK09116 3-oxoacyl-(acyl carri 98.6 1.3E-06 2.8E-11 83.4 15.7 237 56-313 73-405 (405)
106 PRK08722 3-oxoacyl-(acyl carri 98.6 1E-06 2.2E-11 84.4 14.4 244 57-314 75-413 (414)
107 PRK14691 3-oxoacyl-(acyl carri 98.6 1.9E-06 4.2E-11 80.2 14.8 243 57-314 5-339 (342)
108 TIGR02446 FadI fatty oxidation 98.5 4.8E-06 1E-10 80.0 17.0 81 53-133 28-125 (430)
109 PF07451 SpoVAD: Stage V sporu 98.5 1.4E-06 3.1E-11 77.7 12.1 230 56-306 51-309 (329)
110 cd00832 CLF Chain-length facto 98.5 1.7E-06 3.6E-11 82.6 13.5 235 56-312 71-399 (399)
111 PRK06519 3-oxoacyl-(acyl carri 98.5 9.6E-06 2.1E-10 77.1 18.3 233 56-313 73-395 (398)
112 PLN02787 3-oxoacyl-[acyl-carri 98.5 2.8E-06 6.2E-11 83.5 15.0 242 57-314 200-538 (540)
113 PRK08947 fadA 3-ketoacyl-CoA t 98.5 4.9E-06 1.1E-10 78.9 16.1 81 53-133 24-123 (387)
114 TIGR02445 fadA fatty oxidation 98.5 1.1E-05 2.4E-10 76.5 17.9 81 53-133 22-121 (385)
115 PRK08170 acetyl-CoA acetyltran 98.4 5.5E-07 1.2E-11 86.5 8.3 81 53-133 24-121 (426)
116 PRK07855 lipid-transfer protei 98.3 3.7E-05 7.9E-10 73.0 17.2 192 52-250 20-311 (386)
117 PRK07910 3-oxoacyl-(acyl carri 98.3 1.8E-05 4E-10 75.8 15.2 240 57-314 84-417 (418)
118 cd00826 nondecarbox_cond_enzym 98.3 2.3E-06 5E-11 81.4 8.1 81 53-133 20-117 (393)
119 PRK07937 lipid-transfer protei 98.2 6.2E-05 1.3E-09 70.5 15.4 228 54-303 21-337 (352)
120 PRK07967 3-oxoacyl-(acyl carri 98.2 5.2E-05 1.1E-09 72.4 15.1 237 56-315 71-404 (406)
121 PF00108 Thiolase_N: Thiolase, 98.0 1.5E-05 3.4E-10 71.6 6.8 82 52-133 22-120 (264)
122 PF08540 HMG_CoA_synt_C: Hydro 97.9 1.4E-05 3.1E-10 71.9 5.5 109 202-317 40-204 (282)
123 TIGR02813 omega_3_PfaA polyket 97.6 0.0025 5.3E-08 73.1 17.0 210 94-315 185-462 (2582)
124 PTZ00455 3-ketoacyl-CoA thiola 97.5 0.00037 8E-09 67.2 8.4 82 52-133 44-152 (438)
125 COG0304 FabB 3-oxoacyl-(acyl-c 97.4 0.003 6.5E-08 60.2 13.4 173 54-240 69-311 (412)
126 KOG1390 Acetyl-CoA acetyltrans 97.4 0.00053 1.1E-08 61.7 6.7 71 207-280 298-371 (396)
127 PRK09268 acetyl-CoA acetyltran 97.2 0.0012 2.5E-08 63.6 8.3 81 53-133 28-125 (427)
128 PF00109 ketoacyl-synt: Beta-k 97.0 0.0025 5.5E-08 56.6 7.7 109 55-164 86-251 (254)
129 COG3321 Polyketide synthase mo 96.4 0.16 3.4E-06 54.5 16.9 212 59-278 94-362 (1061)
130 KOG1394 3-oxoacyl-(acyl-carrie 95.9 0.049 1.1E-06 50.1 9.0 216 4-237 23-333 (440)
131 PF02803 Thiolase_C: Thiolase, 95.5 0.04 8.6E-07 43.5 5.8 99 205-313 24-122 (123)
132 PRK08170 acetyl-CoA acetyltran 95.1 0.084 1.8E-06 50.9 8.0 76 147-236 261-338 (426)
133 KOG1389 3-oxoacyl CoA thiolase 94.9 0.06 1.3E-06 48.6 5.8 144 149-316 276-425 (435)
134 cd00826 nondecarbox_cond_enzym 94.1 0.17 3.7E-06 48.3 7.3 75 205-282 271-363 (393)
135 PTZ00455 3-ketoacyl-CoA thiola 94.0 0.27 5.9E-06 47.5 8.5 129 146-282 252-403 (438)
136 PRK09268 acetyl-CoA acetyltran 92.5 0.57 1.2E-05 45.2 8.3 149 147-313 259-426 (427)
137 PF08541 ACP_syn_III_C: 3-Oxoa 92.1 0.23 4.9E-06 36.6 3.9 36 68-107 1-36 (90)
138 COG0183 PaaJ Acetyl-CoA acetyl 90.9 0.61 1.3E-05 44.4 6.5 81 53-133 24-124 (392)
139 KOG1391 Acetyl-CoA acetyltrans 89.4 0.39 8.5E-06 42.4 3.4 52 53-106 25-76 (396)
140 PF13723 Ketoacyl-synt_2: Beta 88.4 1.5 3.2E-05 38.3 6.3 30 55-88 33-62 (218)
141 PF08392 FAE1_CUT1_RppA: FAE1/ 87.8 2 4.4E-05 38.9 7.0 84 202-301 84-172 (290)
142 PF02801 Ketoacyl-synt_C: Beta 87.3 1.3 2.9E-05 34.4 5.0 75 203-280 25-106 (119)
143 cd00830 KAS_III Ketoacyl-acyl 84.6 2 4.4E-05 39.2 5.6 47 57-107 222-268 (320)
144 PRK08304 stage V sporulation p 83.1 11 0.00025 34.8 9.6 81 202-302 57-139 (337)
145 PRK09352 3-oxoacyl-(acyl carri 82.1 3.1 6.7E-05 38.1 5.7 45 59-107 220-264 (319)
146 PRK06816 3-oxoacyl-(acyl carri 81.2 3.9 8.5E-05 38.7 6.2 49 55-107 269-322 (378)
147 PRK12404 stage V sporulation p 79.2 14 0.00029 34.2 8.6 66 203-279 56-123 (334)
148 PRK06840 hypothetical protein; 79.1 2.3 4.9E-05 39.5 3.8 46 58-107 237-282 (339)
149 TIGR02845 spore_V_AD stage V s 78.9 16 0.00034 33.8 9.0 80 203-302 52-133 (327)
150 PLN02377 3-ketoacyl-CoA syntha 78.6 6.6 0.00014 38.7 6.9 49 202-252 173-225 (502)
151 KOG1392 Acetyl-CoA acetyltrans 78.5 3.1 6.7E-05 37.5 4.2 55 53-107 63-118 (465)
152 COG0304 FabB 3-oxoacyl-(acyl-c 78.5 2 4.3E-05 41.2 3.2 44 60-103 278-322 (412)
153 TIGR00748 HMG_CoA_syn_Arc hydr 78.1 2.7 5.9E-05 39.2 4.0 48 56-107 206-253 (345)
154 KOG1391 Acetyl-CoA acetyltrans 77.7 3.2 6.8E-05 36.9 3.9 90 150-254 250-342 (396)
155 PLN00415 3-ketoacyl-CoA syntha 77.6 6.9 0.00015 38.1 6.6 83 203-300 136-222 (466)
156 PLN02192 3-ketoacyl-CoA syntha 77.3 5.5 0.00012 39.3 5.9 84 202-300 177-264 (511)
157 PF02801 Ketoacyl-synt_C: Beta 77.0 0.77 1.7E-05 35.8 -0.0 46 60-105 27-73 (119)
158 PLN03170 chalcone synthase; Pr 76.9 9.3 0.0002 36.5 7.3 83 203-300 108-194 (401)
159 CHL00203 fabH 3-oxoacyl-acyl-c 76.6 2.7 5.9E-05 38.8 3.5 45 59-107 227-271 (326)
160 PRK07204 3-oxoacyl-(acyl carri 76.0 2.6 5.6E-05 38.9 3.2 47 57-107 229-275 (329)
161 cd00831 CHS_like Chalcone and 75.6 11 0.00024 35.2 7.5 50 202-253 86-139 (361)
162 PRK05963 3-oxoacyl-(acyl carri 75.6 3.3 7.1E-05 38.2 3.8 47 57-107 226-272 (326)
163 PLN02932 3-ketoacyl-CoA syntha 75.3 7 0.00015 38.2 6.0 68 202-277 149-220 (478)
164 PRK12879 3-oxoacyl-(acyl carri 75.2 3.2 6.9E-05 38.1 3.6 45 59-107 226-270 (325)
165 PLN02854 3-ketoacyl-CoA syntha 73.4 9.6 0.00021 37.7 6.5 68 202-277 189-260 (521)
166 PF02803 Thiolase_C: Thiolase, 73.1 2.4 5.3E-05 33.4 1.9 44 60-107 24-67 (123)
167 TIGR00747 fabH 3-oxoacyl-(acyl 73.1 3.4 7.5E-05 37.8 3.3 46 58-107 219-264 (318)
168 COG0332 FabH 3-oxoacyl-[acyl-c 72.4 3.7 8.1E-05 38.0 3.2 49 55-107 220-268 (323)
169 PRK09258 3-oxoacyl-(acyl carri 72.2 15 0.00032 33.9 7.3 51 202-254 62-117 (338)
170 PF00195 Chal_sti_synt_N: Chal 72.2 12 0.00025 32.9 6.1 85 203-302 102-190 (226)
171 PLN03172 chalcone synthase fam 71.9 12 0.00027 35.6 6.8 85 203-302 104-192 (393)
172 PLN03173 chalcone synthase; Pr 71.6 13 0.00028 35.4 6.8 85 203-302 104-192 (391)
173 PLN02326 3-oxoacyl-[acyl-carri 71.3 4.4 9.4E-05 38.4 3.5 46 58-107 280-325 (379)
174 PRK09585 anmK anhydro-N-acetyl 70.3 9.1 0.0002 36.1 5.4 52 55-106 68-127 (365)
175 PLN03168 chalcone synthase; Pr 69.6 14 0.00029 35.3 6.5 84 203-302 103-191 (389)
176 PRK06147 3-oxoacyl-(acyl carri 69.4 7.2 0.00016 36.5 4.5 23 60-82 236-258 (348)
177 cd00829 SCP-x_thiolase Thiolas 66.8 7.3 0.00016 36.6 4.0 44 59-106 252-295 (375)
178 PRK06519 3-oxoacyl-(acyl carri 66.4 7.9 0.00017 37.0 4.2 47 58-105 280-327 (398)
179 KOG1394 3-oxoacyl-(acyl-carrie 66.2 6.8 0.00015 36.5 3.5 44 60-103 303-347 (440)
180 PRK14691 3-oxoacyl-(acyl carri 66.1 6 0.00013 37.0 3.2 48 57-104 205-253 (342)
181 PLN03169 chalcone synthase fam 65.5 20 0.00042 34.2 6.7 84 203-301 108-195 (391)
182 PRK08722 3-oxoacyl-(acyl carri 65.4 5.6 0.00012 38.2 3.0 46 59-104 279-325 (414)
183 PRK04262 hypothetical protein; 65.0 6.5 0.00014 36.6 3.3 46 58-107 209-254 (347)
184 KOG1794 N-Acetylglucosamine ki 65.0 17 0.00037 33.0 5.6 117 48-166 37-166 (336)
185 PRK06289 acetyl-CoA acetyltran 64.7 8.8 0.00019 36.7 4.2 43 60-106 278-320 (403)
186 PRK12880 3-oxoacyl-(acyl carri 64.5 7.4 0.00016 36.5 3.6 47 57-107 241-287 (353)
187 PRK07910 3-oxoacyl-(acyl carri 63.8 5.9 0.00013 38.1 2.8 46 59-104 287-333 (418)
188 KOG1202 Animal-type fatty acid 63.6 64 0.0014 35.4 10.1 241 57-316 88-417 (2376)
189 PRK09116 3-oxoacyl-(acyl carri 62.2 6.2 0.00013 37.8 2.6 47 58-104 275-322 (405)
190 PRK07516 acetyl-CoA acetyltran 61.7 10 0.00022 36.0 4.1 45 58-106 260-304 (389)
191 PRK12578 acetyl-CoA acetyltran 61.4 10 0.00022 36.0 3.9 43 60-106 259-301 (385)
192 PRK06333 3-oxoacyl-(acyl carri 60.9 6.6 0.00014 37.7 2.6 46 58-103 288-334 (424)
193 COG3425 PksG 3-hydroxy-3-methy 60.9 31 0.00068 32.5 6.9 45 57-105 208-252 (377)
194 cd00751 thiolase Thiolase are 59.7 39 0.00084 32.0 7.6 46 202-249 23-73 (386)
195 COG3424 BcsA Predicted naringe 59.5 32 0.00069 31.6 6.4 86 203-301 78-165 (356)
196 TIGR03150 fabF beta-ketoacyl-a 58.8 9.5 0.00021 36.2 3.3 45 60-104 277-322 (407)
197 PF07451 SpoVAD: Stage V sporu 58.6 18 0.00038 33.1 4.7 82 202-302 52-134 (329)
198 PRK08256 lipid-transfer protei 58.1 12 0.00026 35.6 3.8 44 60-107 266-309 (391)
199 PRK05952 3-oxoacyl-(acyl carri 58.0 9.3 0.0002 36.3 3.0 47 57-103 253-300 (381)
200 cd00327 cond_enzymes Condensin 57.9 59 0.0013 28.2 8.0 44 203-248 9-57 (254)
201 PLN03171 chalcone synthase-lik 57.5 33 0.00071 32.8 6.7 68 203-278 110-181 (399)
202 PLN02787 3-oxoacyl-[acyl-carri 57.4 8.7 0.00019 38.3 2.8 45 60-104 407-452 (540)
203 PRK08257 acetyl-CoA acetyltran 57.1 12 0.00026 36.9 3.7 44 60-107 294-337 (498)
204 PRK07855 lipid-transfer protei 57.0 14 0.00031 35.0 4.1 44 60-107 268-311 (386)
205 cd00827 init_cond_enzymes "ini 56.8 49 0.0011 30.0 7.6 46 202-248 49-98 (324)
206 PRK06504 acetyl-CoA acetyltran 56.0 14 0.0003 35.2 3.9 46 58-107 288-333 (390)
207 KOG2707 Predicted metalloprote 55.8 20 0.00043 33.5 4.5 45 60-105 86-136 (405)
208 PRK08242 acetyl-CoA acetyltran 55.7 12 0.00026 35.9 3.3 43 61-107 303-345 (402)
209 PRK09051 beta-ketothiolase; Pr 55.5 12 0.00027 35.6 3.4 43 60-106 294-336 (394)
210 PRK06158 thiolase; Provisional 55.2 45 0.00097 31.6 7.2 47 202-249 29-75 (384)
211 PRK06066 acetyl-CoA acetyltran 54.8 5 0.00011 38.2 0.6 42 61-106 259-302 (385)
212 PRK06064 acetyl-CoA acetyltran 54.8 15 0.00033 34.8 3.9 43 60-106 260-302 (389)
213 PRK06690 acetyl-CoA acetyltran 54.3 12 0.00025 35.3 3.0 44 59-106 259-302 (361)
214 PRK09185 3-oxoacyl-(acyl carri 54.2 13 0.00028 35.4 3.3 44 60-104 262-307 (392)
215 PRK06501 3-oxoacyl-(acyl carri 53.3 11 0.00025 36.2 2.8 44 60-103 291-335 (425)
216 cd00828 elong_cond_enzymes "el 52.6 13 0.00029 35.3 3.1 47 58-104 274-321 (407)
217 PRK06059 lipid-transfer protei 52.6 19 0.0004 34.4 4.1 42 61-106 276-317 (399)
218 PRK07314 3-oxoacyl-(acyl carri 52.5 13 0.00028 35.4 3.1 45 60-104 278-323 (411)
219 cd00832 CLF Chain-length facto 52.3 15 0.00032 35.1 3.4 47 57-104 269-317 (399)
220 cd00834 KAS_I_II Beta-ketoacyl 52.3 13 0.00028 35.2 3.0 47 58-104 275-322 (406)
221 PRK08963 fadI 3-ketoacyl-CoA t 52.2 33 0.00072 33.1 5.8 67 202-271 30-99 (428)
222 PLN02836 3-oxoacyl-[acyl-carri 52.1 15 0.00033 35.4 3.5 46 58-103 299-345 (437)
223 PRK08142 acetyl-CoA acetyltran 52.1 17 0.00037 34.6 3.8 45 58-106 255-299 (388)
224 KOG1406 Peroxisomal 3-ketoacyl 52.0 16 0.00034 32.7 3.2 80 52-133 25-119 (408)
225 KOG1389 3-oxoacyl CoA thiolase 52.0 33 0.00072 31.5 5.3 83 52-134 57-156 (435)
226 PRK09052 acetyl-CoA acetyltran 51.8 8.8 0.00019 36.7 1.8 44 59-106 298-341 (399)
227 PRK08235 acetyl-CoA acetyltran 51.7 38 0.00083 32.2 6.1 51 202-254 27-82 (393)
228 PRK06025 acetyl-CoA acetyltran 51.7 11 0.00024 36.2 2.4 43 61-107 318-360 (417)
229 smart00825 PKS_KS Beta-ketoacy 51.4 18 0.00038 34.6 3.8 48 57-104 278-326 (424)
230 PRK06366 acetyl-CoA acetyltran 51.2 49 0.0011 31.4 6.7 52 202-254 27-82 (388)
231 PRK06445 acetyl-CoA acetyltran 51.0 18 0.0004 34.4 3.8 44 60-107 294-337 (394)
232 PRK05656 acetyl-CoA acetyltran 50.7 47 0.001 31.6 6.5 50 202-252 27-80 (393)
233 PRK07515 3-oxoacyl-(acyl carri 50.4 14 0.0003 34.8 2.9 29 57-85 270-298 (372)
234 KOG1406 Peroxisomal 3-ketoacyl 50.2 22 0.00048 31.8 3.8 32 56-87 270-301 (408)
235 TIGR01930 AcCoA-C-Actrans acet 50.0 49 0.0011 31.4 6.5 49 202-252 22-75 (386)
236 PRK07801 acetyl-CoA acetyltran 49.9 17 0.00036 34.5 3.4 44 60-107 282-325 (382)
237 cd00833 PKS polyketide synthas 48.4 18 0.0004 34.3 3.4 47 57-103 278-325 (421)
238 PRK09604 UGMP family protein; 48.2 25 0.00053 32.7 4.1 48 57-105 52-105 (332)
239 PRK07661 acetyl-CoA acetyltran 48.0 11 0.00024 35.9 1.8 44 59-106 290-333 (391)
240 PTZ00050 3-oxoacyl-acyl carrie 47.9 19 0.00042 34.5 3.5 47 58-104 283-331 (421)
241 PRK06205 acetyl-CoA acetyltran 47.6 50 0.0011 31.6 6.2 48 202-251 27-79 (404)
242 TIGR02445 fadA fatty oxidation 46.8 22 0.00047 33.8 3.6 41 60-104 282-322 (385)
243 PRK06365 acetyl-CoA acetyltran 46.7 30 0.00065 33.4 4.6 44 59-106 294-339 (430)
244 PRK07108 acetyl-CoA acetyltran 45.6 10 0.00022 36.2 1.1 44 59-106 291-334 (392)
245 PRK09050 beta-ketoadipyl CoA t 45.2 14 0.00031 35.3 2.1 42 60-105 299-340 (401)
246 PLN02644 acetyl-CoA C-acetyltr 45.1 69 0.0015 30.5 6.7 49 202-251 26-78 (394)
247 PF12244 DUF3606: Protein of u 45.1 15 0.00032 24.7 1.5 30 235-267 20-49 (57)
248 PLN02287 3-ketoacyl-CoA thiola 44.9 14 0.0003 36.0 2.0 43 60-106 333-375 (452)
249 PRK06633 acetyl-CoA acetyltran 44.6 59 0.0013 31.0 6.2 69 202-273 28-99 (392)
250 PRK06954 acetyl-CoA acetyltran 44.3 14 0.0003 35.3 1.8 43 60-106 297-339 (397)
251 PRK06157 acetyl-CoA acetyltran 43.6 41 0.00088 32.1 4.9 43 60-106 268-312 (398)
252 PRK05790 putative acyltransfer 43.4 85 0.0019 29.7 7.1 48 202-251 27-79 (393)
253 PF03702 UPF0075: Uncharacteri 43.2 20 0.00044 33.8 2.7 54 53-106 63-126 (364)
254 cd00825 decarbox_cond_enzymes 43.0 33 0.00071 31.3 4.1 32 57-88 204-235 (332)
255 TIGR03285 methan_mark_14 putat 42.8 38 0.00082 31.8 4.2 45 53-97 62-108 (445)
256 PRK08947 fadA 3-ketoacyl-CoA t 42.3 25 0.00054 33.4 3.2 41 60-104 284-324 (387)
257 PRK07851 acetyl-CoA acetyltran 42.2 15 0.00033 35.1 1.7 42 60-105 305-346 (406)
258 PRK07850 acetyl-CoA acetyltran 42.1 16 0.00035 34.7 1.9 44 59-106 286-329 (387)
259 PRK08313 acetyl-CoA acetyltran 41.7 43 0.00093 31.8 4.7 46 58-107 255-302 (386)
260 PF12633 Adenyl_cycl_N: Adenyl 40.6 46 0.00099 28.7 4.2 58 221-280 115-192 (204)
261 TIGR02430 pcaF beta-ketoadipyl 40.0 14 0.0003 35.4 1.1 42 60-105 298-339 (400)
262 PRK13359 beta-ketoadipyl CoA t 39.5 15 0.00032 35.2 1.2 41 60-104 298-338 (400)
263 COG1214 Inactive homolog of me 39.2 36 0.00079 29.6 3.5 51 55-105 36-91 (220)
264 PRK14878 UGMP family protein; 38.4 52 0.0011 30.4 4.6 45 60-105 48-98 (323)
265 PF01135 PCMT: Protein-L-isoas 37.3 37 0.0008 29.3 3.2 43 262-311 49-91 (209)
266 PRK08131 acetyl-CoA acetyltran 37.2 81 0.0018 30.1 5.9 53 202-254 27-83 (401)
267 PRK07103 polyketide beta-ketoa 37.2 21 0.00045 34.2 1.8 23 60-82 283-305 (410)
268 TIGR00329 gcp_kae1 metallohydr 36.4 51 0.0011 30.1 4.2 49 57-105 49-102 (305)
269 TIGR03725 bact_YeaZ universal 34.8 41 0.0009 28.7 3.1 30 56-85 33-62 (202)
270 TIGR02446 FadI fatty oxidation 34.6 1.2E+02 0.0027 29.2 6.7 66 202-270 32-100 (430)
271 PF00814 Peptidase_M22: Glycop 33.6 46 0.001 29.8 3.4 28 58-85 31-58 (268)
272 PTZ00186 heat shock 70 kDa pre 33.5 79 0.0017 32.4 5.4 46 59-105 335-380 (657)
273 COG2377 Predicted molecular ch 32.4 56 0.0012 30.7 3.7 55 53-107 68-132 (371)
274 COG0241 HisB Histidinol phosph 32.3 85 0.0018 26.5 4.5 49 203-254 70-127 (181)
275 TIGR01118 lacA galactose-6-pho 32.2 40 0.00088 27.2 2.4 29 272-309 45-73 (141)
276 PF02502 LacAB_rpiB: Ribose/Ga 32.1 41 0.0009 27.1 2.5 31 270-309 44-74 (140)
277 TIGR03722 arch_KAE1 universal 31.9 45 0.00098 30.8 3.1 44 61-105 50-99 (322)
278 PF01890 CbiG_C: Cobalamin syn 31.6 46 0.00099 26.0 2.7 49 55-106 12-61 (121)
279 KOG2708 Predicted metalloprote 31.6 79 0.0017 27.8 4.2 42 61-102 54-96 (336)
280 TIGR03723 bact_gcp putative gl 31.5 1.3E+02 0.0028 27.7 6.0 49 57-105 50-103 (314)
281 PF11392 DUF2877: Protein of u 31.4 96 0.0021 23.7 4.4 29 250-278 81-109 (110)
282 PRK08621 galactose-6-phosphate 31.0 43 0.00094 27.1 2.4 30 271-309 44-73 (142)
283 PF09887 DUF2114: Uncharacteri 30.3 89 0.0019 29.5 4.6 46 53-98 64-112 (448)
284 PRK05183 hscA chaperone protei 30.1 84 0.0018 31.9 4.9 45 60-105 311-355 (616)
285 PRK06065 acetyl-CoA acetyltran 30.0 1.5E+02 0.0032 28.2 6.3 47 202-249 30-81 (392)
286 PF14574 DUF4445: Domain of un 29.7 22 0.00048 34.1 0.7 42 62-107 312-354 (412)
287 TIGR00689 rpiB_lacA_lacB sugar 29.7 46 0.00099 27.0 2.4 29 272-309 45-73 (144)
288 PRK05571 ribose-5-phosphate is 29.6 44 0.00096 27.2 2.3 30 272-310 48-77 (148)
289 PRK13410 molecular chaperone D 29.2 87 0.0019 32.2 4.9 48 57-105 308-355 (668)
290 PF07736 CM_1: Chorismate muta 29.2 1E+02 0.0022 24.1 4.0 43 61-106 23-68 (118)
291 TIGR01120 rpiB ribose 5-phosph 29.0 48 0.001 26.8 2.4 29 272-309 46-74 (143)
292 PRK07027 cobalamin biosynthesi 29.0 86 0.0019 24.6 3.8 48 56-106 15-63 (126)
293 TIGR01991 HscA Fe-S protein as 28.9 1E+02 0.0022 31.2 5.3 47 58-105 293-339 (599)
294 CHL00094 dnaK heat shock prote 28.7 86 0.0019 31.8 4.7 47 58-105 309-355 (621)
295 PRK13411 molecular chaperone D 28.3 78 0.0017 32.4 4.4 44 60-104 310-353 (653)
296 PF05378 Hydant_A_N: Hydantoin 28.3 37 0.00081 28.4 1.7 32 55-86 34-65 (176)
297 PRK12613 galactose-6-phosphate 27.4 55 0.0012 26.4 2.4 29 272-309 44-72 (141)
298 COG0533 QRI7 Metal-dependent p 27.3 1.2E+02 0.0026 28.3 5.0 45 60-105 54-104 (342)
299 PRK12615 galactose-6-phosphate 27.1 53 0.0012 27.4 2.4 31 271-310 46-76 (171)
300 PTZ00340 O-sialoglycoprotein e 27.0 1.2E+02 0.0027 28.3 5.1 45 60-105 53-103 (345)
301 PLN03184 chloroplast Hsp70; Pr 27.0 97 0.0021 31.9 4.8 47 58-105 346-392 (673)
302 PRK08622 galactose-6-phosphate 26.7 54 0.0012 27.4 2.4 30 272-310 47-76 (171)
303 KOG1392 Acetyl-CoA acetyltrans 26.4 51 0.0011 29.9 2.3 97 209-317 350-465 (465)
304 PTZ00215 ribose 5-phosphate is 26.2 57 0.0012 26.7 2.4 30 272-310 51-80 (151)
305 TIGR01119 lacB galactose-6-pho 26.1 57 0.0012 27.3 2.4 30 271-309 46-75 (171)
306 PF00108 Thiolase_N: Thiolase, 25.9 93 0.002 27.8 4.0 50 202-251 27-79 (264)
307 TIGR02350 prok_dnaK chaperone 25.4 96 0.0021 31.3 4.4 45 59-104 306-350 (595)
308 TIGR02133 RPI_actino ribose 5- 24.5 58 0.0013 26.5 2.1 30 271-309 47-76 (148)
309 PTZ00400 DnaK-type molecular c 24.2 95 0.0021 31.9 4.1 45 60-105 350-394 (663)
310 PRK00290 dnaK molecular chaper 24.1 1.3E+02 0.0028 30.6 5.0 46 59-105 308-353 (627)
311 PRK07027 cobalamin biosynthesi 23.2 1.3E+02 0.0027 23.7 3.8 49 202-250 16-64 (126)
312 PTZ00009 heat shock 70 kDa pro 22.6 1.2E+02 0.0027 31.0 4.6 44 60-104 315-358 (653)
313 COG0054 RibH Riboflavin syntha 22.6 1.1E+02 0.0025 24.9 3.4 45 52-99 22-67 (152)
314 TIGR01833 HMG-CoA-S_euk 3-hydr 21.9 3.4E+02 0.0074 26.5 7.2 82 203-300 52-142 (454)
315 PF01890 CbiG_C: Cobalamin syn 21.9 85 0.0019 24.4 2.6 49 202-250 14-62 (121)
316 TIGR01835 HMG-CoA-S_prok 3-hyd 21.1 81 0.0018 29.8 2.8 47 58-105 205-252 (379)
317 PLN02577 hydroxymethylglutaryl 20.6 3.6E+02 0.0077 26.4 7.0 80 205-300 57-145 (459)
318 PTZ00450 macrophage migration 20.5 33 0.00071 26.5 -0.0 26 204-232 76-102 (113)
No 1
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=100.00 E-value=8.6e-59 Score=420.12 Aligned_cols=287 Identities=22% Similarity=0.265 Sum_probs=251.5
Q ss_pred cceEEccccccCCCcccccccHHHHHhhhcCCchh---HHHHHHHHHhhhcccchHHHHHHHHHHHHHHcCCCCCCcCEE
Q 047978 5 GKFQETQRPQANPANCVYQTDYPDFYFRITSSNHM---TELKEKFKRMYILVPKVPKLGKEAVSKAIKEWGQPISKITHL 81 (320)
Q Consensus 5 ~~~~I~a~~~~lP~~~i~~~e~~~~~~~~~~~~~~---~gi~~~~r~~~~~~e~~~~la~~Aa~~aL~~ag~~~~dId~l 81 (320)
.+++|.++|.|+|+++++|+|+.+.. ..+++|+ +||++ ||++.++|+.++|+++||++||+++|++|+|||+|
T Consensus 2 ~~a~i~g~G~~lP~~~vtn~d~e~~~--~tsdewI~~rtGir~--R~~a~~~e~~s~la~~Aa~~AL~~Agi~~~dIDlI 77 (323)
T COG0332 2 MNAKILGIGSYLPERVVTNADLEKRV--DTSDEWIETRTGIRE--RRIAADDETTSDLAVEAARKALEDAGISPDDIDLI 77 (323)
T ss_pred CcceEEEEEeecCCcccChHHHHhcc--CCCcceeeeecCCce--eeecCCCccHHHHHHHHHHHHHHHcCCCHHHCCEE
Confidence 46899999999999999999999776 7788994 67887 99998999999999999999999999999999999
Q ss_pred EEEeeCC-CCCCCHHHHHHHHcCCCcc-------hhhhhhh--------hhcCCCCeEEEEEeecccccccCCCCCCchh
Q 047978 82 ISCSVSG-VDMPGADYQLTKLLGLKPS-------VKRVMLT--------AESNAGARVLVVCSEITVGTFRAPSDENLSC 145 (320)
Q Consensus 82 i~~s~t~-~~~p~~a~~l~~~LGl~~~-------~c~~~l~--------l~~~~~~~~LVv~~e~~s~~~~~~~~~~~~~ 145 (320)
|++|+|| +.+|++|+.||++||+.+. .|+||+| +++|.+++||||++|++|+ +.+++|
T Consensus 78 I~aT~tpd~~~Ps~A~~vq~~LG~~~~~afDl~aaCsgf~yaL~~A~~~i~sG~~k~vLVVg~e~~S~-~ld~~d----- 151 (323)
T COG0332 78 IVATSTPDHLFPSTACLVQARLGLGGAPAFDLQAACSGFLYALSVADGLIRSGGYKNVLVVGAETLSR-ILDWTD----- 151 (323)
T ss_pred EEEcCCcccCCChHHHHHHHHhCCCCcceeechhhhHHHHHHHHHHHHHHHcCCCCEEEEEehhHhhc-cCCHhh-----
Confidence 9999999 8899999999999999984 4999988 7899999999999999997 777765
Q ss_pred hhhhhhhccCceEEEEeecC-CCCCCCCeeEEeccCcee----cCCCc-----ccc-cccccccc-----eechhHHHHH
Q 047978 146 LVNRAIVGDGTAALIVGACP-DINTERPLFHIVPTAQTI----LPDSE-----DAI-KGHFRESP-----LIADNIDKFL 209 (320)
Q Consensus 146 ~~~~~~~GDgAaA~ll~~~~-~~~~~~~~~~~~~~~~~~----~p~~~-----~~~-~~~~~~~g-----~~~~~~~~~i 209 (320)
+.++.+|||||+|+||++.+ ..++. .+++.++++.. .|... ... ...+.|+| +..+.+++++
T Consensus 152 R~t~vlFgDGAgAvvl~~~~~~~~i~--~~~l~sdg~~~~~l~~~~~~~~~~~~~~~~~~~~m~Gr~vfk~av~~~~~~~ 229 (323)
T COG0332 152 RDTCVLFGDGAGAVVLEATEDDNGIL--DTDLGSDGSQGDLLYLPGGGSATPKEESGGGLLVMDGREVFKFAVRAMPKAI 229 (323)
T ss_pred ccceEEEcCCceEEEEecCCCCcCee--eeeeeccccCCCeeeccCCCCccccccccccceeeccHHHHHHHHHHHHHHH
Confidence 56899999999999999997 33433 24555554421 12110 011 24577888 5678899999
Q ss_pred HHHhhhcCCCCCCCCceEEEEcCCChhHHHHHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCC
Q 047978 210 AESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATT 289 (320)
Q Consensus 210 ~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~ 289 (320)
+++|++++++++|+ ++|+|||+|.++++.++++|++|++|+..+ +++||||++||+|++|++++++ |++++
T Consensus 230 ~~~L~~~~l~~~dI--d~~vpHQan~ri~~~i~~~l~~~~~k~~~~---~~~yGNtsaAsiplaL~~~~~~----g~ik~ 300 (323)
T COG0332 230 EEVLEKAGLTPEDI--DWFVPHQANLRIIEAIAKKLGIPEEKVVVT---VDKYGNTSAASIPLALDEALRE----GRIKP 300 (323)
T ss_pred HHHHHHcCCCHHHC--CEEccccccHHHHHHHHHHcCCCHHHHhhH---HHHhcccccchHHHHHHHHhhh----CCCCC
Confidence 99999999999997 499999999999999999999999999985 9999999999999999999999 99999
Q ss_pred CCCCceEEEEeeccchhhhheeeeec
Q 047978 290 GEELEWGVLLGFEAGLTVEAIVLRSI 315 (320)
Q Consensus 290 G~~~d~vll~~~G~G~~~~a~~l~~~ 315 (320)
| |+++|.+||+|++|+++++||.
T Consensus 301 G---d~ill~~fG~Gltwg~~~~r~~ 323 (323)
T COG0332 301 G---DLVLLEAFGGGLTWGAALVRWG 323 (323)
T ss_pred C---CEEEEEeecCcceeeeEEEEeC
Confidence 9 9999999999999999999984
No 2
>PLN03169 chalcone synthase family protein; Provisional
Probab=100.00 E-value=2.3e-51 Score=387.13 Aligned_cols=301 Identities=39% Similarity=0.619 Sum_probs=243.5
Q ss_pred ceEEccccccCCCcccccccHHHHHhhhc--CCch----------hHHHHHHHHHhhh----------------------
Q 047978 6 KFQETQRPQANPANCVYQTDYPDFYFRIT--SSNH----------MTELKEKFKRMYI---------------------- 51 (320)
Q Consensus 6 ~~~I~a~~~~lP~~~i~~~e~~~~~~~~~--~~~~----------~~gi~~~~r~~~~---------------------- 51 (320)
+++|.++|+++|+++++|+|+.+.++... ...+ .+||.+ ||++.
T Consensus 21 ~~~I~gigt~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~--R~~~~~~~~~~~~~~~~~~~~~~~~~r 98 (391)
T PLN03169 21 KATILALGKAFPSQLVPQEYLVDGYFRDTKCDDPALKEKLERLCKTTTVKT--RYVVMSKEILDKYPELATEGTPTIKQR 98 (391)
T ss_pred CeEEEEEEeeCCCeecCHHHHHHHHHHHhcccCHHHHHHHHHHHHhCCcce--eeEeccccchhhCccccccCCCCHHHH
Confidence 48899999999999999999998653211 1222 145565 66653
Q ss_pred ---cccchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcc---------hhhhhhh-----
Q 047978 52 ---LVPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPS---------VKRVMLT----- 114 (320)
Q Consensus 52 ---~~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~---------~c~~~l~----- 114 (320)
++|++.+||++|+++||+++|++++|||+||++|++.+..|+.+.+||++||++++ .|+|+++
T Consensus 99 ~~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~lI~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~d~~~gC~g~~~aL~~A 178 (391)
T PLN03169 99 LDIANEAVTQMAVEASLACIKEWGRPVSDITHLVYVSSSEARLPGGDLYLAKQLGLSPDVQRVMLYFLGCSGGVAGLRVA 178 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECcCCCCCCcHHHHHHHHhCcCCcceeeecccChhHHHHHHHHHH
Confidence 26788999999999999999999999999999998778899999999999999864 2788776
Q ss_pred ---hhcCCCCeEEEEEeecccccccCCCCCCchhhhhhhhhccCceEEEEeecCCCCCCCCeeEEeccCceecCCCcccc
Q 047978 115 ---AESNAGARVLVVCSEITVGTFRAPSDENLSCLVNRAIVGDGTAALIVGACPDINTERPLFHIVPTAQTILPDSEDAI 191 (320)
Q Consensus 115 ---l~~~~~~~~LVv~~e~~s~~~~~~~~~~~~~~~~~~~~GDgAaA~ll~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 191 (320)
+++++.++||||++|.++..+..+.+....++.+..+|||||+|+||++++......+.+++...+...+|.+.+.+
T Consensus 179 ~~~~~~~~~~~vLvv~~e~~s~~~~~~~~~~~~d~~~~~lFGDGAaA~vl~~~~~~~~~~~~~~l~~~~~~~ip~~~~~~ 258 (391)
T PLN03169 179 KDIAENNPGSRVLLTTSETTILGFRPPSPDRPYDLVGAALFGDGAAAVIIGADPIPVSESPFFELHTAIQQFLPGTEKTI 258 (391)
T ss_pred HHHHHhCCCCeEEEEEEEcChhhccCCCccchhhhhhhhhccCceEEEEEecCCCcccCCcceEEEeeeeeEcCCCcccc
Confidence 67788999999999999875543332223456778999999999999986542111234667666666677665444
Q ss_pred cccccccc-----------eechhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHHHHHHcCCCcchhhhhHHHHh
Q 047978 192 KGHFRESP-----------LIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKTKLRETRHVLS 260 (320)
Q Consensus 192 ~~~~~~~g-----------~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e~~~~~~~~~~ 260 (320)
.+.+.+.| ++.+.+++.++++|+++|++++|+++++|++||+|+++++.++++||+|+||+..+|.+++
T Consensus 259 ~~~~~~~g~~~~~g~~v~~~~~~~~~~~i~~~L~~~gl~~~did~~~~v~Hq~n~~il~~v~~~Lgl~~ek~~~s~~~l~ 338 (391)
T PLN03169 259 DGRLTEEGINFKLGRELPQKIEDNIEGFCKKLMKKAGLVEKDYNDLFWAVHPGGPAILNRLEKKLKLAPEKLECSRRALM 338 (391)
T ss_pred CceecCCceEEEECcHHHHHHHHHHHHHHHHHHHHcCCCCCCCCcceEEecCCCHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 44433333 4456788888999999999988886568999999999999999999999999998888999
Q ss_pred ccCCcccchHHHHHHHHHHhchhcCCCC---CCCCCceEEEEeeccchhhhheeeeec
Q 047978 261 EYGNMASATVLFVLDEMRKRSVEEGKAT---TGEELEWGVLLGFEAGLTVEAIVLRSI 315 (320)
Q Consensus 261 ~~Gn~~sasi~~~L~~~~~~~~~~g~l~---~G~~~d~vll~~~G~G~~~~a~~l~~~ 315 (320)
+||||+|||+|+.|++++++ ++++ +| |++++++||+|++|+++++||.
T Consensus 339 ~~GNtsSasip~~L~~~~~~----~~~~~~~~g---d~~ll~afG~G~s~~~~ll~~~ 389 (391)
T PLN03169 339 DYGNVSSNTIVYVLEYMREE----LKKKGEEDE---EWGLILAFGPGITFEGILARNL 389 (391)
T ss_pred HhCCchHhHHHHHHHHHHHh----hcccCCCCC---cEEEEEEEcccHhHHHHHHhhh
Confidence 99999999999999999987 7765 56 9999999999999999999983
No 3
>PLN03172 chalcone synthase family protein; Provisional
Probab=100.00 E-value=7e-50 Score=376.18 Aligned_cols=307 Identities=64% Similarity=1.011 Sum_probs=249.9
Q ss_pred ceEEccccccCCCcccccccHHHHHhhhcCCc---h----h------HHHHHHHHHhhh---------------------
Q 047978 6 KFQETQRPQANPANCVYQTDYPDFYFRITSSN---H----M------TELKEKFKRMYI--------------------- 51 (320)
Q Consensus 6 ~~~I~a~~~~lP~~~i~~~e~~~~~~~~~~~~---~----~------~gi~~~~r~~~~--------------------- 51 (320)
...|.++|+.+|+++++++|+.+.+++.++.+ . + +||.+ ||...
T Consensus 16 ~~~I~~igta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~--R~~~~~~~~~~~~~~~~~~~~p~~~~ 93 (393)
T PLN03172 16 PATILAIGKATPANCVSQADYPDYYFRITNSEHMTELKEKFKRMCDKSMIKK--RYMHLTEEILKENPNMCAYMAPSLDA 93 (393)
T ss_pred CeEEEEEEecCCCccccHHHHHHHHHHHhcccCchHHHHHHHHHHHhcCCCc--eeEeccchhhhhCccccccCCCCHHH
Confidence 47899999999999999999998874333111 1 1 33443 43322
Q ss_pred ----cccchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcch---------hhhhhh----
Q 047978 52 ----LVPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPSV---------KRVMLT---- 114 (320)
Q Consensus 52 ----~~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~~---------c~~~l~---- 114 (320)
+.+...+|+++|+++||+++|++++|||+||++|+|++..|+.+.+|+++||+++++ |+|+++
T Consensus 94 r~~~~~~~a~~La~~Aa~~aL~~ag~~~~dId~ii~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~~~~~gC~g~~~aL~~ 173 (393)
T PLN03172 94 RQDMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLKPSVKRFMMYQQGCFAGGTVLRL 173 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCcCchHHHHHHHHhCCCCCceEEeeeCCchHHHHHHHHH
Confidence 112346899999999999999999999999999999966999999999999998852 778766
Q ss_pred ----hhcCCCCeEEEEEeecccccccCCCCCCchhhhhhhhhccCceEEEEeecCCCCCCCCeeEEeccCceecCCCccc
Q 047978 115 ----AESNAGARVLVVCSEITVGTFRAPSDENLSCLVNRAIVGDGTAALIVGACPDINTERPLFHIVPTAQTILPDSEDA 190 (320)
Q Consensus 115 ----l~~~~~~~~LVv~~e~~s~~~~~~~~~~~~~~~~~~~~GDgAaA~ll~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 190 (320)
+++++.++||||++|.+|.++.++.|+++++.++..+|||||+|+||++++..+...+.+++.+..+..+|++++.
T Consensus 174 A~~~~~~~~~~~vLVV~~E~~S~~~~~~~d~~~~~~v~~~LFGDGAaAvVl~~~~~~~~~~~~~~i~~~~~~~~~~t~~~ 253 (393)
T PLN03172 174 AKDLAENNAGSRVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIIGADPDTKIERPLFEIVSAAQTILPDSDGA 253 (393)
T ss_pred HHHHHHcCCCCeEEEEEEehhhhhhcccccccHHhhhccchhcCceEEEEEecCCCCcccCceeEEeeeccEEecCCccc
Confidence 6778899999999999996576676655556678899999999999998765433345678888777788888777
Q ss_pred ccccccccc-----------eechhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHHHHHHcCCCcchhhhhHHHH
Q 047978 191 IKGHFRESP-----------LIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKTKLRETRHVL 259 (320)
Q Consensus 191 ~~~~~~~~g-----------~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e~~~~~~~~~ 259 (320)
+.|.+...| ++.+.+++.++++|+++|++..|+ ++|++||+|+++++.+++.|+++++++..+|.++
T Consensus 254 ~~~~i~~~G~~~~l~~~vp~~~~~~i~~~~~~~L~~~gl~~~di--~~~~~Hqgg~~Il~~v~~~Lgl~~~~~~~s~~vl 331 (393)
T PLN03172 254 IDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFAPIGINDWNS--IFWIAHPGGPAILDQVEIKLDLKEEKLRATRHVL 331 (393)
T ss_pred ccceEEcCCcEEEEechHHHHHHHHHHHHHHHHhhhcCCCcccc--ceEEecCCcHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 777666665 334567788888899999987775 3899999999999999999999999999998999
Q ss_pred hccCCcccchHHHHHHHHHHhchhcCCCCCCCCCceEEEEeeccchhhhheeeeecc
Q 047978 260 SEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEAIVLRSIP 316 (320)
Q Consensus 260 ~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~~l~~~~ 316 (320)
++||||+|||+|+.|+++++...++|++++|+|.+++++++||+|++++++++||.|
T Consensus 332 ~~yGNtSSaSv~~vL~~~~~~~~~~g~~~~G~~~~~~ll~afGpG~t~~~~ll~~~~ 388 (393)
T PLN03172 332 SDYGNMSSACVLFILDEMRKKSIEEGKGSTGEGLEWGVLFGFGPGLTVETVVLHSVP 388 (393)
T ss_pred HHhCccHHhHHHHHHHHHHhhhhhcCCCCCCCCcceEEEEEeCCcceeeeeeeEecc
Confidence 999999999999999999853333378877754478999999999999999999965
No 4
>PLN03170 chalcone synthase; Provisional
Probab=100.00 E-value=2.1e-49 Score=374.19 Aligned_cols=308 Identities=61% Similarity=1.000 Sum_probs=248.4
Q ss_pred ceEEccccccCCCcccccccHHHHHhhhcCC---c---h-h------HHHHHHHHHhhh---------------------
Q 047978 6 KFQETQRPQANPANCVYQTDYPDFYFRITSS---N---H-M------TELKEKFKRMYI--------------------- 51 (320)
Q Consensus 6 ~~~I~a~~~~lP~~~i~~~e~~~~~~~~~~~---~---~-~------~gi~~~~r~~~~--------------------- 51 (320)
+.+|.++|+.+|++.++++|+.+.+++..+. . . + +||+. ||...
T Consensus 20 ~~~i~~i~ta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~--R~~~~~~~~~~~~~~~~~~~~p~~~~ 97 (401)
T PLN03170 20 PATVLAIGTATPANCVHQADYPDYYFRITKSEHMTELKEKFKRMCDKSQIRK--RYMHLTEEYLAENPNMCAYMAPSLDA 97 (401)
T ss_pred CeEEEEEeecCCCccccHHHHHHHHHHHccccCchhHHHHHHHHHHhCCCCc--eeEeccccchhhCccccccCCCCHHH
Confidence 4689999999999999999999887543211 1 1 1 34443 33321
Q ss_pred ----cccchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcch---------hhhhhh----
Q 047978 52 ----LVPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPSV---------KRVMLT---- 114 (320)
Q Consensus 52 ----~~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~~---------c~~~l~---- 114 (320)
+.+...+||++|+++||+++|++++|||+||++|+|++..|+.+.+|+++||+++++ |+|+++
T Consensus 98 r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r~~d~~~gC~G~~~aL~~ 177 (401)
T PLN03170 98 RQDIVVVEVPKLGKAAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVNRLMMYQQGCFAGGTVLRV 177 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCCCChHHHHHHHHhCcCcccHHHHhhcChhHHHHHHHHH
Confidence 123457799999999999999999999999999999966999999999999998862 778766
Q ss_pred ----hhcCCCCeEEEEEeecccccccCCCCCCchhhhhhhhhccCceEEEEeecCCCCCCCCeeEEeccCceecCCCccc
Q 047978 115 ----AESNAGARVLVVCSEITVGTFRAPSDENLSCLVNRAIVGDGTAALIVGACPDINTERPLFHIVPTAQTILPDSEDA 190 (320)
Q Consensus 115 ----l~~~~~~~~LVv~~e~~s~~~~~~~~~~~~~~~~~~~~GDgAaA~ll~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 190 (320)
+++++.++||||++|.+|.++.+|.+.+.++..+..+|||||+|+||++++..++..+.+++.+.++..+|++++.
T Consensus 178 A~~l~~~~~~~~vLVV~~E~~S~~~~~~~~~~~~~~~~~~LFGDGAaAvVl~~~~~~~~~~~~~~l~~~~~~~~p~~~~~ 257 (401)
T PLN03170 178 AKDLAENNRGARVLVVCSEITAVTFRGPSESHLDSMVGQALFGDGAAAVIVGADPDERVERPLFQLVSASQTILPDSEGA 257 (401)
T ss_pred HHHHHHcCCCCeEEEEEEehhhhccCCcccchhhhhhhhhhhhceeEEEEEecCCcccccCCceEEeeccceEecCCccc
Confidence 6778899999999999998665565544456677899999999999998765433334567887777778877666
Q ss_pred ccccccccc-----------eechhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHHHHHHcCCCcchhhhhHHHH
Q 047978 191 IKGHFRESP-----------LIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKTKLRETRHVL 259 (320)
Q Consensus 191 ~~~~~~~~g-----------~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e~~~~~~~~~ 259 (320)
+.|.+++.| ++.+.+++.++++|+++|++.+|+ ++|++||+|+++++.+++.|+++++|+..+|.++
T Consensus 258 ~~~~i~~~G~~~~l~~~vp~~~~~~i~~~v~~~L~~~gl~~~di--~~~v~Hqgg~~il~~v~~~Lgl~~~~~~~s~~~l 335 (401)
T PLN03170 258 IDGHLREVGLTFHLLKDVPGLISKNIERSLEEAFKPLGITDYNS--IFWVAHPGGPAILDQVEAKVGLEKERMRATRHVL 335 (401)
T ss_pred ccceEEcCCeEEEEehHHHHHHHHHHHHHHHHHHHhcCCCcccc--CeEEecCCcHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 666666555 234566778889999999998875 4999999999999999999999999999888899
Q ss_pred hccCCcccchHHHHHHHHHHhchhcCCCCCCCCCceEEEEeeccchhhhheeeeeccC
Q 047978 260 SEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEAIVLRSIPM 317 (320)
Q Consensus 260 ~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~~l~~~~~ 317 (320)
++||||+|+++|+.|++++++..++|++++|+|.|++++++||+|++|+++++||.|.
T Consensus 336 ~~~GNtsSasv~~vL~~~~~~~~~~g~~~~G~~~~~~ll~afGpG~t~~~~ll~~~~~ 393 (401)
T PLN03170 336 SEYGNMSSACVLFILDEMRKRSAEDGQATTGEGFDWGVLFGFGPGLTVETVVLHSVPI 393 (401)
T ss_pred HHhCccHHhHHHHHHHHHHHhHhhcCCCCCCCCccEEEEEEeCchHhHHhHHheeccc
Confidence 9999999999999999998532223888887544789999999999999999999764
No 5
>PLN03168 chalcone synthase; Provisional
Probab=100.00 E-value=1.6e-48 Score=367.07 Aligned_cols=307 Identities=47% Similarity=0.769 Sum_probs=237.8
Q ss_pred ceEEccccccCCCcccccccHHHHHhhhcCC---c---h-h------HHHHHHHHHhhh---------------------
Q 047978 6 KFQETQRPQANPANCVYQTDYPDFYFRITSS---N---H-M------TELKEKFKRMYI--------------------- 51 (320)
Q Consensus 6 ~~~I~a~~~~lP~~~i~~~e~~~~~~~~~~~---~---~-~------~gi~~~~r~~~~--------------------- 51 (320)
...|.++|+..|++.++++|+.+.+++.++. . . + +||.. ||...
T Consensus 15 ~~~i~~i~ta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~--R~~~~~~~~~~~~~~~~~~~~ps~~~ 92 (389)
T PLN03168 15 PACVLGIGTAVPPAEFLQSEYPDFFFNITNCGEKEALKAKFKRICDKSGIRK--RHMFLTEEVLKANPGICTYMEPSLNV 92 (389)
T ss_pred CeEEEEEeccCCCcccCHHHHHHHHHHhccccCcHHHHHHHHHHHHhcCCCe--eeeeccccchhhCcccccccCCCHHH
Confidence 4789999999999999999999987543321 1 0 1 33443 44432
Q ss_pred ----cccchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcc---------hhhhhhh----
Q 047978 52 ----LVPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPS---------VKRVMLT---- 114 (320)
Q Consensus 52 ----~~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~---------~c~~~l~---- 114 (320)
+.+.+.+|+.+|+++||+++|++++|||+||++|+|++..|+++.+|+++||++++ .|+|+++
T Consensus 93 r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r~~d~~~gC~g~~~aL~~ 172 (389)
T PLN03168 93 RHDIVVVQVPKLAAEAAQKAIKEWGGRKSDITHIVFATTSGVNMPGADHALAKLLGLKPTVKRVMMYQTGCFGGASVLRV 172 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCccHHHHHHHHhCcCCcceeeeeeCCccHHHHHHHHH
Confidence 12356899999999999999999999999999999997799999999999999875 2888876
Q ss_pred ----hhcCCCCeEEEEEeecccccccCCCCCCchhhhhhhhhccCceEEEEeecCCCCCCCCeeEEeccCceecCCCccc
Q 047978 115 ----AESNAGARVLVVCSEITVGTFRAPSDENLSCLVNRAIVGDGTAALIVGACPDINTERPLFHIVPTAQTILPDSEDA 190 (320)
Q Consensus 115 ----l~~~~~~~~LVv~~e~~s~~~~~~~~~~~~~~~~~~~~GDgAaA~ll~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 190 (320)
+++++.++||||++|.+|.++.++++.+.+++.+..+|||||+|+||++++....+.+.+++...++..+|++.+.
T Consensus 173 A~~~i~~~~~~~VLVV~~E~~S~~~~~~~~~~~~~~~~~~LFGDGAaAvvl~~~~~~~~~~~~~~~~~~~~~~~p~s~~~ 252 (389)
T PLN03168 173 AKDLAENNKGARVLAVASEVTAVTYRAPSENHLDGLVGSALFGDGAGVYVVGSDPKPEVEKALFEVHWAGETILPESDGA 252 (389)
T ss_pred HHHHHHhCCCCEEEEEEEehhhhhccCcccccHHHHhccccccCccEEEEEecCCCCccCCcceEEEeeeeEEEcCCCCc
Confidence 6788999999999999998665443333455678999999999999998654322234567766666678877666
Q ss_pred ccccccccc-----------eechhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHHHHHHcCCCcchhhhhHHHH
Q 047978 191 IKGHFRESP-----------LIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKTKLRETRHVL 259 (320)
Q Consensus 191 ~~~~~~~~g-----------~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e~~~~~~~~~ 259 (320)
+.|.+...| ++.+.++.+++++++..++...|+ ++|++||+|+++++.++++|++++||+..+|+++
T Consensus 253 ~~~~~~~~g~~~~l~~~vp~~i~~~~~~~l~~~l~~~~~~~~d~--~~~v~Hqgg~~Il~~v~~~Lgl~~ek~~~s~~vl 330 (389)
T PLN03168 253 IDGHLTEAGLIFHLMKDVPGLISKNIEKFLNEARKCVGSPDWNE--MFWAVHPGGPAILDQVEAKLKLTKDKMQGSRDIL 330 (389)
T ss_pred cCceEecCceEEEECHHHHHHHHHHHHHHHHHHHHhcCCCcccc--ceEEecCCcHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 566555555 233455666677777788764443 4899999999999999999999999999989999
Q ss_pred hccCCcccchHHHHHHHHHHhchhcCCCCCCCCCceEEEEeeccchhhhheeeeecc
Q 047978 260 SEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEAIVLRSIP 316 (320)
Q Consensus 260 ~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~~l~~~~ 316 (320)
++||||+|||+|+.|++++++..+.|.-..|+|.|++++++||+|++|+++++||.-
T Consensus 331 ~~yGNtSSaSv~~vL~~~~~~~~~~g~~~~~~g~~~~ll~afGpG~t~~~~llr~~~ 387 (389)
T PLN03168 331 SEFGNMSSASVLFVLDQIRQRSVKMGASTLGEGSEFGFFIGFGPGLTLEVLVLRAAA 387 (389)
T ss_pred HHhCccHhhhHHHHHHHHHHHHhhcCCCCCCCCccEEEEEEEcchhhhhhhhheecc
Confidence 999999999999999998864222221001122389999999999999999999953
No 6
>PLN03173 chalcone synthase; Provisional
Probab=100.00 E-value=1.6e-48 Score=366.83 Aligned_cols=306 Identities=60% Similarity=0.964 Sum_probs=246.3
Q ss_pred ceEEccccccCCCcccccccHHHHHhhhcC--C-c---h-h------HHHHHHHHHhhh---------------------
Q 047978 6 KFQETQRPQANPANCVYQTDYPDFYFRITS--S-N---H-M------TELKEKFKRMYI--------------------- 51 (320)
Q Consensus 6 ~~~I~a~~~~lP~~~i~~~e~~~~~~~~~~--~-~---~-~------~gi~~~~r~~~~--------------------- 51 (320)
...|.++|+..|++.++++|+.+.+++..+ . . . + +||.. ||...
T Consensus 16 ~~~i~~i~ta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~--R~~~~~~~~~~~~~~~~~~~~p~~~~ 93 (391)
T PLN03173 16 PATIMAIGTSTPPNCVDQSTYPDYYFRITNSEHKVELKEKFKRMCEKSMIKK--RYMHLTEEILKENPSVCEYMAPSLDA 93 (391)
T ss_pred CeEEEEEEccCCCcccCHHHHHHHHHHHhccccchhHHHHHHHHHHhCCCCe--eeEeccchhhhhCcccccccCCCHHH
Confidence 478999999999999999999988743331 1 1 0 1 33443 33321
Q ss_pred ----cccchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcch---------hhhhhh----
Q 047978 52 ----LVPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPSV---------KRVMLT---- 114 (320)
Q Consensus 52 ----~~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~~---------c~~~l~---- 114 (320)
+.+.+.+||++|+++||+++|++++|||+||++|+|++..|+.+.+|+++||+++++ |+|+++
T Consensus 94 r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~~~~~gC~g~~~aL~~ 173 (391)
T PLN03173 94 RQDMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRSSVKRFMMYQQGCFAGGTVLRL 173 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCcccHHHHHHHHHhCCCccceeeehhcCccHHHHHHHHH
Confidence 122356999999999999999999999999999999966899999999999998752 888766
Q ss_pred ----hhcCCCCeEEEEEeecccccccCCCCCCchhhhhhhhhccCceEEEEeecCCCCCCCCeeEEeccCceecCCCccc
Q 047978 115 ----AESNAGARVLVVCSEITVGTFRAPSDENLSCLVNRAIVGDGTAALIVGACPDINTERPLFHIVPTAQTILPDSEDA 190 (320)
Q Consensus 115 ----l~~~~~~~~LVv~~e~~s~~~~~~~~~~~~~~~~~~~~GDgAaA~ll~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 190 (320)
+++++.++||||++|.+|.++.++.|+++++..+..+|||||+|+||+.++..++..+.+++.+..+..+|++++.
T Consensus 174 A~~~~~~~~~~~vLVV~~E~~S~~~~~~~d~~~~~~v~~~LFGDGAaAvvl~~~~~~~~~~~~~~l~~~~~~~~~~t~~~ 253 (391)
T PLN03173 174 AKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAIIIGSDPVLGVEKPLFELVSAAQTILPDSDGA 253 (391)
T ss_pred HHHHHHhCCCCeEEEEEEehhhhhhCCccccchhhhhhhhhhcCceEEEEEeCCCCCCcCCcceEEEeeeeEEecCCccc
Confidence 6778899999999999996576676654555677899999999999998654343344578877777778887766
Q ss_pred ccccccccc-----------eechhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHHHHHHcCCCcchhhhhHHHH
Q 047978 191 IKGHFRESP-----------LIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKTKLRETRHVL 259 (320)
Q Consensus 191 ~~~~~~~~g-----------~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e~~~~~~~~~ 259 (320)
+.|.+...| ++.+.+++.++++|+++|++.+|+ ++|++||+|+++++.+++.||++++|+..+|.++
T Consensus 254 ~~~~i~~~G~~~~l~~~vp~~~~~~~~~~i~~~L~~~gl~~~di--~~~v~Hqgg~~Il~~v~~~LgL~~ekl~~s~~vl 331 (391)
T PLN03173 254 IDGHLREVGLTFHLLKDVPGLISKNVEKSLTEAFKPLGISDWNS--LFWIAHPGGPAILDQVEAKLALKPEKLRATRHVL 331 (391)
T ss_pred eeeEEEcCceEEEEecHHHHHHHHHHHHHHHHHHHhcCCCcccc--CeEEECCCcHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 666665555 334677888999999999998885 4999999999999999999999999999999999
Q ss_pred hccCCcccchHHHHHHHHHHhchhcCCCCCCCCCceEEEEeeccchhhhheeeeec
Q 047978 260 SEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEAIVLRSI 315 (320)
Q Consensus 260 ~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~~l~~~ 315 (320)
++||||+|||+|+.|++++++..+++.+++|+|.+++++++||+|+++++++++|.
T Consensus 332 ~~yGNtSSaSv~~vL~~~~~~~~~~~~~~~g~~~~~~l~~afGpG~t~e~~ll~~~ 387 (391)
T PLN03173 332 SEYGNMSSACVLFILDEMRKKSAEDGLKSTGEGLEWGVLFGFGPGLTVETVVLHSV 387 (391)
T ss_pred HHhCcchhhHHHHHHHHHHHhhhhcCCCCCCCCcceEEEEEeCchHHHHHHHHhhc
Confidence 99999999999999999996422225555554348899999999999999999985
No 7
>PLN03171 chalcone synthase-like protein; Provisional
Probab=100.00 E-value=1.9e-48 Score=367.96 Aligned_cols=300 Identities=44% Similarity=0.696 Sum_probs=236.0
Q ss_pred ceEEccccccCCCcccccccHHHHHhhh-cCCc---------h---hHHHHHHHHHhhhcc-------------------
Q 047978 6 KFQETQRPQANPANCVYQTDYPDFYFRI-TSSN---------H---MTELKEKFKRMYILV------------------- 53 (320)
Q Consensus 6 ~~~I~a~~~~lP~~~i~~~e~~~~~~~~-~~~~---------~---~~gi~~~~r~~~~~~------------------- 53 (320)
.+.|.++|+|+|+++++|+++.+.+... ..++ + .+||++ ||++.++
T Consensus 22 ~~~I~gigt~~P~~~v~n~~~~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~--R~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (399)
T PLN03171 22 LAAVLAIGTANPANCVPQDEFPDFYFRATKSDHLTALKDKFKRICQELGVQK--RYLHHTEELLSAHPEFLDHDAPSLDA 99 (399)
T ss_pred CcEEEEEEeeCCCcccCHHHHHHHHHHHhcccccHHHHHHHHHHHHhcCCCc--eeEeccccccccCccccccCCCCHHH
Confidence 4789999999999999999999875221 1222 2 145665 7777654
Q ss_pred ------cchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcc---------hhhhhhh----
Q 047978 54 ------PKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPS---------VKRVMLT---- 114 (320)
Q Consensus 54 ------e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~---------~c~~~l~---- 114 (320)
+++.+||++|+++||+++|++++|||+||++|+|++..|+++.+|+++||+++. .|+|+++
T Consensus 100 r~~~~~~~a~~la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~P~~a~~v~~~LGl~~~~~~~~~~~~gC~g~~~aL~~ 179 (399)
T PLN03171 100 RLDIAADAVPELAAEAAKKAIAEWGRPAADITHLVVTTNSGAHIPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGAAALRL 179 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCchHHHHHHHhCCCcccceeeccCCccHHHHHHHHH
Confidence 489999999999999999999999999999999995589999999999999864 2888876
Q ss_pred ----hhcCCCCeEEEEEeecccccccCCCCCC-chhhhhhhhhccCceEEEEeecCCCCCCCCeeEEeccCceecCCCcc
Q 047978 115 ----AESNAGARVLVVCSEITVGTFRAPSDEN-LSCLVNRAIVGDGTAALIVGACPDINTERPLFHIVPTAQTILPDSED 189 (320)
Q Consensus 115 ----l~~~~~~~~LVv~~e~~s~~~~~~~~~~-~~~~~~~~~~GDgAaA~ll~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 189 (320)
+++++.++||||++|.+|. +.++.|+. .+..++..+|||||+|+||++++... ..+.+++........|.+.+
T Consensus 180 A~~li~~~~~~~vLVv~~e~~s~-~~~~~d~~~~~~~v~~~LFGDGAaA~vl~~~~~~~-~~~~~~l~~~~~~~~p~~~~ 257 (399)
T PLN03171 180 AKDLAENNRGARVLVVAAEITLL-LFNGPDEGCFQTLLNQGLFGDGAAAVIVGADADAA-ERPLFEIVSAAQAIIPESDD 257 (399)
T ss_pred HHHHHHhCCCCeEEEEEEecccc-ccCCCCcccHHhhhccccccCccEEEEEecCCCCC-CCCceEEEEeeeEEecCCch
Confidence 6778899999999999997 44454542 23444578999999999999865421 11346776665666777655
Q ss_pred cccccccccc----eechhHHHHH----HHHhhh---------cCCCCCCCCceEEEEcCCChhHHHHHHHHcCCCcchh
Q 047978 190 AIKGHFRESP----LIADNIDKFL----AESFDQ---------VSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKTKL 252 (320)
Q Consensus 190 ~~~~~~~~~g----~~~~~~~~~i----~~~l~~---------~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e~~ 252 (320)
.+.+.+...| +..+.+|+.+ ++++++ .|++.+|+ .|++||+|+++++.+.++||+|++|+
T Consensus 258 ~~~~~~~~~g~~~~~~~~~vp~~i~~~l~~~l~~~l~~~~~~~~g~~~~di---~~~~Hq~~~~il~~v~~~Lgl~~ek~ 334 (399)
T PLN03171 258 AINMHFTEGGLDGNIGTRQVPGLIGDNIERCLLDAFAPLLGGDGGAEWNDL---FWAVHPGSSAILDQVDAALGLEPEKL 334 (399)
T ss_pred heEEEEEcCCceEEECchhHHHHHHHHHHHHHHHHHHhhcccccCCCcccc---eEEEcCCcHHHHHHHHHHcCCCHHHh
Confidence 5544333333 4446777777 444443 46777774 56689999999999999999999999
Q ss_pred hhhHHHHhccCCcccchHHHHHHHHHHhchhcCC--CCCCCCCceEEEEeeccchhhhheeeeecc
Q 047978 253 RETRHVLSEYGNMASATVLFVLDEMRKRSVEEGK--ATTGEELEWGVLLGFEAGLTVEAIVLRSIP 316 (320)
Q Consensus 253 ~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~--l~~G~~~d~vll~~~G~G~~~~a~~l~~~~ 316 (320)
..+|.++++||||+|||+|++|++++++ ++ +++|++.|++++++||+|++|++++++|..
T Consensus 335 ~~s~~~l~~yGNtssaSip~~L~~~~~~----~~~~~~~G~~~d~vll~~fG~Glt~~~~ll~~~~ 396 (399)
T PLN03171 335 AASRRVLSDYGNMFGATVIFALDELRRQ----MEEAAAAGAWPELGVMMAFGPGLTVDAMLLHASG 396 (399)
T ss_pred HHHHHHHHHhCcchhhhHHHHHHHHHhh----HhhcCCCCCCcceEEEEEEcccHHHHHHHhhccc
Confidence 9888899999999999999999999987 53 566644489999999999999999999863
No 8
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=1.3e-48 Score=364.18 Aligned_cols=286 Identities=19% Similarity=0.262 Sum_probs=229.3
Q ss_pred ccceEEccccccCCCcccccccHHHHHhhhcCCch-------hHHHHHHHHHhhhcccchHHHHHHHHHHHHHHcCCCCC
Q 047978 4 LGKFQETQRPQANPANCVYQTDYPDFYFRITSSNH-------MTELKEKFKRMYILVPKVPKLGKEAVSKAIKEWGQPIS 76 (320)
Q Consensus 4 ~~~~~I~a~~~~lP~~~i~~~e~~~~~~~~~~~~~-------~~gi~~~~r~~~~~~e~~~~la~~Aa~~aL~~ag~~~~ 76 (320)
+++++|.++++|+|+++++|+++..... . +..+ .+||.+ ||++.+++++++|+++|+++||+++|++++
T Consensus 5 ~~~~~I~~~g~~lP~~~v~~~~~~~~~~-~-~~~~~~~~i~~~~Gi~~--R~~~~~~e~~~~la~~Aa~~aL~~a~~~~~ 80 (353)
T PRK12880 5 FDKAKISGICVSVPEHKICIDDELESVF-S-NDIKTLKRMKKVIGLNT--RYICDENTCVSDLGKHAANTLLQGLNIDKN 80 (353)
T ss_pred ccccEEEEEEEECCCeEecHHHHHHHhc-C-cchhhhhhhhhccCceE--EEeCCCCCCHHHHHHHHHHHHHHHcCCCHH
Confidence 5679999999999999999997655442 1 1221 256776 888888999999999999999999999999
Q ss_pred CcCEEEEEeeCC-CCCCCHHHHHHHHcCCCcc--------hhhhhhh--------hhcCCCCeEEEEEeecccccccCCC
Q 047978 77 KITHLISCSVSG-VDMPGADYQLTKLLGLKPS--------VKRVMLT--------AESNAGARVLVVCSEITVGTFRAPS 139 (320)
Q Consensus 77 dId~li~~s~t~-~~~p~~a~~l~~~LGl~~~--------~c~~~l~--------l~~~~~~~~LVv~~e~~s~~~~~~~ 139 (320)
|||+||++|+|| +..|+++.+|+++||+++. .|+++++ +++++.+ +|||++|.+|+ +.+|+
T Consensus 81 dId~lI~~t~t~d~~~P~~a~~v~~~Lg~~~~~~~~di~~~C~g~~~aL~~A~~~i~~~~~~-~LVv~~e~~S~-~~~~~ 158 (353)
T PRK12880 81 SLDALIVVTQSPDFFMPSTACYLHQLLNLSSKTIAFDLGQACAGYLYGLFVAHSLIQSGLGK-ILLICGDTLSK-FIHPK 158 (353)
T ss_pred HCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCCceEEehhhhhHHHHHHHHHHHHHHHcCCCC-EEEEEehhhhc-cCCcc
Confidence 999999999999 9999999999999999853 3888776 6778888 99999999997 55665
Q ss_pred CCCchhhhhhhhhccCceEEEEeecCCCCCCCCeeEEeccCc----eecCCCccc------------c-------ccccc
Q 047978 140 DENLSCLVNRAIVGDGTAALIVGACPDINTERPLFHIVPTAQ----TILPDSEDA------------I-------KGHFR 196 (320)
Q Consensus 140 ~~~~~~~~~~~~~GDgAaA~ll~~~~~~~~~~~~~~~~~~~~----~~~p~~~~~------------~-------~~~~~ 196 (320)
++ .+..+|||||+|+||++++... ..+++.+.+. ..+|.+... + ...+.
T Consensus 159 d~-----~~~~lFGDGAaA~vl~~~~~~~---~~~~~~~~~~~~~~~~~p~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (353)
T PRK12880 159 NM-----NLAPIFGDGVSATLIEKTDFNE---AFFELGSDGKYFDKLIIPKGAMRIPKADIFNDDSLMQTEEFRQLENLY 230 (353)
T ss_pred cC-----CceeeecccceEEEEEecCCCC---ceEEEEecCCCCCeEEecCCCcCCCccccccccccccccccccCceEE
Confidence 52 3468999999999999765421 1234444333 223322110 0 01234
Q ss_pred ccc-----eechhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHHHHHHcCCCcchhhhhHHHHhccCCcccchHH
Q 047978 197 ESP-----LIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKTKLRETRHVLSEYGNMASATVL 271 (320)
Q Consensus 197 ~~g-----~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~ 271 (320)
++| +..+.++++++++|+++|++++|+ ++|++||+|+++++.+.++|++|++|+... ++++|||++|||+|
T Consensus 231 ~~g~~v~~~~~~~~~~~i~~~L~~~gl~~~di--d~~v~HQ~~~~i~~~i~~~Lgl~~ek~~~~--~l~~~GNtssasip 306 (353)
T PRK12880 231 MDGANIFNMALECEPKSFKEILEFSKVDEKDI--AFHLFHQSNAYLVDCIKEELKLNDDKVPNF--IMEKYANLSACSLP 306 (353)
T ss_pred EcCHHHHHHHHHHHHHHHHHHHHHcCCCHHHC--CEEEECCCCHHHHHHHHHHhCCCHHHhhhh--hHHhhCCHHHHHHH
Confidence 555 456788999999999999999986 499999999999999999999999999643 58999999999999
Q ss_pred HHHHHHHHhchhcCCCCCCCCCceEEEEeeccchhhhheeeeeccCc
Q 047978 272 FVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEAIVLRSIPMV 318 (320)
Q Consensus 272 ~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~~l~~~~~~ 318 (320)
++|++++++ ++ -+++|++||+|++|+++++||.|-+
T Consensus 307 ~~L~~~~~~----~~-------~~~ll~~~G~G~s~g~~ll~~~~~~ 342 (353)
T PRK12880 307 ALLCELDTP----KE-------FKASLSAFGAGLSWGSAVLNFKDLY 342 (353)
T ss_pred HHHHHHHHc----CC-------cEEEEEEEchhhhheEeEEEECCcC
Confidence 999999876 43 3589999999999999999996543
No 9
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=100.00 E-value=1.1e-48 Score=362.46 Aligned_cols=284 Identities=17% Similarity=0.178 Sum_probs=229.5
Q ss_pred ceEEccccccCCCcccccccHHHHHhhhcCCch---hHHHHHHHHHhhhcccchHHHHHHHHHHHHHHcCCCCCCcCEEE
Q 047978 6 KFQETQRPQANPANCVYQTDYPDFYFRITSSNH---MTELKEKFKRMYILVPKVPKLGKEAVSKAIKEWGQPISKITHLI 82 (320)
Q Consensus 6 ~~~I~a~~~~lP~~~i~~~e~~~~~~~~~~~~~---~~gi~~~~r~~~~~~e~~~~la~~Aa~~aL~~ag~~~~dId~li 82 (320)
.++|.++|.|+|+++++|+|+.+.+ +...++ .+||.+ ||++.++|++.+||++||++||+++|++++|||+||
T Consensus 3 ~~~I~~~g~~lP~~~v~~~~~~~~~--~~~~~~i~~~~Gi~~--r~~~~~~e~~~~la~~Aa~~aL~~ag~~~~~Id~li 78 (326)
T PRK05963 3 SSRIAGFGHAVPDRRVENAEIEAQL--GLETGWIERRTGIRC--RRWAAPDETLSDLAASAGDMALSDAGIERSDIALTL 78 (326)
T ss_pred ccEEEEEEEECCCCeecHHHHHHHc--CCCHHHhhhccCCeE--EEEcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 4799999999999999999999886 344444 356776 888888999999999999999999999999999999
Q ss_pred EEeeCC-CCCCCHHHHHHHHcCCCcch-------hhhhhh--------hhcCCCCeEEEEEeecccccccCCCCCCchhh
Q 047978 83 SCSVSG-VDMPGADYQLTKLLGLKPSV-------KRVMLT--------AESNAGARVLVVCSEITVGTFRAPSDENLSCL 146 (320)
Q Consensus 83 ~~s~t~-~~~p~~a~~l~~~LGl~~~~-------c~~~l~--------l~~~~~~~~LVv~~e~~s~~~~~~~~~~~~~~ 146 (320)
++|+++ +..|+.+.+||++||++++. |+++++ ++++ .+++|||++|..++ +.++.+ +
T Consensus 79 ~~t~~~d~~~p~~a~~v~~~Lg~~~~~~~di~~~C~g~~~aL~~A~~~l~~~-~~~aLVv~~d~~s~-~~~~~~-----~ 151 (326)
T PRK05963 79 LATSTPDHLLPPSAPLLAHRLGLQNSGAIDLAGACAGFLYALVLADGFVRAQ-GKPVLVVAANILSR-RINMAE-----R 151 (326)
T ss_pred EECCCCCCCCCcHHHHHHHHhCCCCCceeeccchhhHHHHHHHHHHHHHHcC-CCeEEEEEechhhc-cCCccc-----c
Confidence 999999 89999999999999998753 777765 5555 58999999999886 445543 3
Q ss_pred hhhhhhccCceEEEEeecCCC--CCCCCeeEEeccCce----ecCCC-------ccc--ccccccc-cc-----eechhH
Q 047978 147 VNRAIVGDGTAALIVGACPDI--NTERPLFHIVPTAQT----ILPDS-------EDA--IKGHFRE-SP-----LIADNI 205 (320)
Q Consensus 147 ~~~~~~GDgAaA~ll~~~~~~--~~~~~~~~~~~~~~~----~~p~~-------~~~--~~~~~~~-~g-----~~~~~~ 205 (320)
.+..+|||||+|+||++++.. ++.. ..+.+.+.. .+|.. .+. .+..+.+ +| ...+.+
T Consensus 152 ~~~~lfGDgA~A~ll~~~~~~~~~~l~--~~~~t~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (326)
T PRK05963 152 ASAVLFADAAGAVVLAPSAKANSGVLG--SQLISDGSHYDLIKIPAGGSARPFAPERDASEFLMTMQDGRAVFTEAVRMM 229 (326)
T ss_pred CceEEEeecceEEEEEecCCCCCceEE--EEEEEcCCCCCeEEeCCCCcCCCCcccccccccceEecCCHHHHHHHHHHH
Confidence 357899999999999987643 2211 122222211 12211 110 0111221 23 335677
Q ss_pred HHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHHHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcC
Q 047978 206 DKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEG 285 (320)
Q Consensus 206 ~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g 285 (320)
++.++++|+++|++++|| ++|++||+|+++++.+.+.|++|++|+.. ++++|||+++||+|++|++++++ +
T Consensus 230 ~~~~~~~L~~~gl~~~di--d~~~~h~~~~~~~~~~~~~l~l~~~k~~~---~l~~~Gn~~sas~~~~L~~~~~~----~ 300 (326)
T PRK05963 230 SGASQNVLASAAMTPQDI--DRFFPHQANARIVDKVCETIGIPRAKAAS---TLETYGNSSAATIPLSLSLANLE----Q 300 (326)
T ss_pred HHHHHHHHHHcCCCHHHC--CEEEeCCCCHHHHHHHHHHcCCCHHHhhh---hHHhhCcHHHHHHHHHHHHHHHh----C
Confidence 889999999999999997 39999999999999999999999999976 59999999999999999999988 9
Q ss_pred CCCCCCCCceEEEEeeccchhhhheeeee
Q 047978 286 KATTGEELEWGVLLGFEAGLTVEAIVLRS 314 (320)
Q Consensus 286 ~l~~G~~~d~vll~~~G~G~~~~a~~l~~ 314 (320)
++++| |+++++++|+|++++++++||
T Consensus 301 ~~~~G---d~vll~~~G~G~~~~~~ll~~ 326 (326)
T PRK05963 301 PLREG---ERLLFAAAGAGMTGGAVVMRV 326 (326)
T ss_pred CCCCC---CEEEEEEEehhhhheeeEEeC
Confidence 99999 999999999999999999997
No 10
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=100.00 E-value=7.3e-48 Score=361.56 Aligned_cols=293 Identities=37% Similarity=0.549 Sum_probs=234.9
Q ss_pred eEEccccccCCCcccccccHHHHHhhhcCC----------ch---hHHHHHHHHHhhhc--cc-----------------
Q 047978 7 FQETQRPQANPANCVYQTDYPDFYFRITSS----------NH---MTELKEKFKRMYIL--VP----------------- 54 (320)
Q Consensus 7 ~~I~a~~~~lP~~~i~~~e~~~~~~~~~~~----------~~---~~gi~~~~r~~~~~--~e----------------- 54 (320)
++|.++++|+|+++++|+++.+.+....+. ++ .+||++ ||++.+ ++
T Consensus 2 ~~I~~~~~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gI~~--R~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (361)
T cd00831 2 ATILAIGTAVPPHRVPQSELVDFYRRLFSSDHLPELKEKLKRLCAKTGIET--RYLVLPGGEETYAPRPEMSPSLDERND 79 (361)
T ss_pred cEEEEEEEeCCCCcCCHHHhhHHHHhcCChhhhHHHHHHHHHHHhhcceeE--EEEEecCchhhcCCccccCCCcCcchh
Confidence 689999999999999999999987322222 22 245665 777754 32
Q ss_pred ----chHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcc---------hhhhhhh-------
Q 047978 55 ----KVPKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPS---------VKRVMLT------- 114 (320)
Q Consensus 55 ----~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~---------~c~~~l~------- 114 (320)
++.+|+.+|+++||+++|++|+|||+||++|++++..|+.+.+|+++||+++. .|+++++
T Consensus 80 ~~~~~~~~la~~Aa~~aL~~a~~~~~~Id~li~~s~~~~~~P~~a~~i~~~lgl~~~~~~~dv~~~~C~~~~~al~~A~~ 159 (361)
T cd00831 80 IALEEARELAEEAARGALDEAGLRPSDIDHLVVNTSTGNPTPSLDAMLINRLGLRPDVKRYNLGGMGCSAGAIALDLAKD 159 (361)
T ss_pred hHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECCCCCCCCCHHHHHHHHhCCCcccchhccccccchhHHHHHHHHHH
Confidence 68999999999999999999999999999999888899999999999999863 2776654
Q ss_pred -hhcCCCCeEEEEEeecccccccCCCCCCchhhhhhhhhccCceEEEEeecCCCC-CCCCeeEEeccCceecCCCccccc
Q 047978 115 -AESNAGARVLVVCSEITVGTFRAPSDENLSCLVNRAIVGDGTAALIVGACPDIN-TERPLFHIVPTAQTILPDSEDAIK 192 (320)
Q Consensus 115 -l~~~~~~~~LVv~~e~~s~~~~~~~~~~~~~~~~~~~~GDgAaA~ll~~~~~~~-~~~~~~~~~~~~~~~~p~~~~~~~ 192 (320)
+++++.++||||++|..|. +.++.+ +++..++.++|||||+|+||++++... +..+.+++.+.....+|...+.+.
T Consensus 160 ~~~~~~~~~aLvv~~e~~s~-~~~~~d-~~~~~~~~~lfGDgaaA~ll~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 237 (361)
T cd00831 160 LLEANPGARVLVVSTELCSL-WYRGPD-HRSMLVGNALFGDGAAAVLLSNDPRDRRRERPLFELVRAASTLLPDSEDAMG 237 (361)
T ss_pred HHHHCCCCEEEEEEeecccc-eeCCCC-cHHHhhhhhhccCCceEEEEEcCCCcccccccceeeecccceeeecCCCceE
Confidence 6778899999999999997 555544 233345679999999999999876532 122334555544444565433222
Q ss_pred ccccc-------cc----eechhHHHHHHHHhhhc--CCCCCCCCceEEEEcCCChhHHHHHHHHcCCCcchhhhhHHHH
Q 047978 193 GHFRE-------SP----LIADNIDKFLAESFDQV--SLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKTKLRETRHVL 259 (320)
Q Consensus 193 ~~~~~-------~g----~~~~~~~~~i~~~l~~~--g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e~~~~~~~~~ 259 (320)
+.+.. +. ++.+.++++++++|+++ |++++|+ .+|++||+|+++++.+++.||++++|+..++.++
T Consensus 238 ~~~~~~~~~~~~~~~v~~~~~~~~~~~i~~~L~~~~~g~~~~di--d~~~~H~~~~~i~~~v~~~lgl~~~~~~~s~~~l 315 (361)
T cd00831 238 WHLGEEGLTFVLSRDVPRLVEKNLERVLRKLLARLGIGLFKLAF--DHWCVHPGGRAVLDAVEKALGLSPEDLEASRMVL 315 (361)
T ss_pred EEEEcceEEEEeChhHHHHHHHHHHHHHHHHhccccCCCccccc--eEEEECCCChHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 22211 11 33467888999999999 9999986 4999999999999999999999999998777789
Q ss_pred hccCCcccchHHHHHHHHHHhchhcCCCCCCCCCceEEEEeeccchhhhheee
Q 047978 260 SEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEAIVL 312 (320)
Q Consensus 260 ~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~~l 312 (320)
++||||+|||+|++|++++++ |++++| |++++++||+|+++++++|
T Consensus 316 ~~~GN~~sasi~~~L~~~~~~----g~~~~G---d~vll~~~G~G~s~~~~l~ 361 (361)
T cd00831 316 RRYGNMSSSSVLYVLAYMEAK----GRVKRG---DRGLLIAFGPGFTCESAVW 361 (361)
T ss_pred HHhCCchhccHHHHHHHHHHh----CCCCCC---CEEEEEEEcCCceeeeeeC
Confidence 999999999999999999998 999999 9999999999999999875
No 11
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=100.00 E-value=3e-47 Score=358.92 Aligned_cols=285 Identities=20% Similarity=0.281 Sum_probs=230.1
Q ss_pred ceEEccccccCCCcccccccHHHHHhhhcCCch---hHHHHHHHHHhhhcccchHHHHHHHHHHHHHHcCCCCCCcCEEE
Q 047978 6 KFQETQRPQANPANCVYQTDYPDFYFRITSSNH---MTELKEKFKRMYILVPKVPKLGKEAVSKAIKEWGQPISKITHLI 82 (320)
Q Consensus 6 ~~~I~a~~~~lP~~~i~~~e~~~~~~~~~~~~~---~~gi~~~~r~~~~~~e~~~~la~~Aa~~aL~~ag~~~~dId~li 82 (320)
+++|.++|.|+|+++++|+|+.+.+ ..+.++ .+||.+ |+++.++++..+|+.+|+++||+++|++++|||+||
T Consensus 47 ~~~I~g~g~~lP~~~v~n~el~~~~--~~~~~~i~~~tGi~~--R~~~~~~~~~~~La~~Aa~~aL~~agi~~~dId~li 122 (379)
T PLN02326 47 GSKLVGCGSAVPKLLITNDDLSKLV--DTSDEWIATRTGIRN--RRVLSGDETLTSLAVEAAKKALEMAGVDPEDVDLVL 122 (379)
T ss_pred CcEEEEEEEECCCceecHHHHHHhc--CCchhheecccCcce--EeecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 5899999999999999999999886 333444 367877 888888999999999999999999999999999999
Q ss_pred EEeeCCCCCCCHHHHHHHHcCCCcc-------hhhhhhh--------hhcCCCCeEEEEEeecccccccCCCCCCchhhh
Q 047978 83 SCSVSGVDMPGADYQLTKLLGLKPS-------VKRVMLT--------AESNAGARVLVVCSEITVGTFRAPSDENLSCLV 147 (320)
Q Consensus 83 ~~s~t~~~~p~~a~~l~~~LGl~~~-------~c~~~l~--------l~~~~~~~~LVv~~e~~s~~~~~~~~~~~~~~~ 147 (320)
++|+++...++.+.+|+++||+++. .|+++++ ++++..+++|||++|..+. +.++.+ +.
T Consensus 123 ~~s~~~~~~~~~a~~v~~~LG~~~~~~~dv~~~Ca~~~~aL~~A~~~l~~g~~~~vLVv~~e~~s~-~~~~~d-----~~ 196 (379)
T PLN02326 123 LCTSSPDDLFGSAPQVQAALGCTNALAFDLTAACSGFVLGLVTAARFIRGGGYKNVLVIGADALSR-YVDWTD-----RG 196 (379)
T ss_pred EEeCCCCccCcHHHHHHHHhCCCCCceeeccccchHHHHHHHHHHHHHHcCCCCEEEEEEechhcC-CCCccc-----cC
Confidence 9999884345678999999999764 2777654 6788899999999999986 555544 23
Q ss_pred hhhhhccCceEEEEeecCCC--CCCCCeeEEeccCce----ec--CCC---------ccc--------ccccccccc---
Q 047978 148 NRAIVGDGTAALIVGACPDI--NTERPLFHIVPTAQT----IL--PDS---------EDA--------IKGHFRESP--- 199 (320)
Q Consensus 148 ~~~~~GDgAaA~ll~~~~~~--~~~~~~~~~~~~~~~----~~--p~~---------~~~--------~~~~~~~~g--- 199 (320)
+..+|||||+|+||++++.. ++. .+.+.+.+.. .. ++. ... ....+.++|
T Consensus 197 ~~~lfGDGAaAvlL~~~~~~~~~i~--~~~~~t~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v 274 (379)
T PLN02326 197 TCILFGDGAGAVVLQACDDDEDGLL--GFDMHSDGNGHKHLHATFKGEDDDSSGGNTNGVGDFPPKKASYSCIQMNGKEV 274 (379)
T ss_pred ceEEEcceeEEEEEEEcCCCCCceE--EEEEEEcCCCCCeEEecCCCCcccccccccccccccccccccccceEecCHHH
Confidence 45799999999999987643 211 2233332210 00 110 000 011245555
Q ss_pred --eechhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHHHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHH
Q 047978 200 --LIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEM 277 (320)
Q Consensus 200 --~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~ 277 (320)
+..+.++++++++|+++|++++|+ ++|++||+|+++++.+++.||+|+||+..+ +++||||+|||+|++|+++
T Consensus 275 ~~~~~~~~~~~i~~~L~~~gl~~~dI--d~~v~Hq~n~~~~~~~~~~Lgl~~ek~~~~---l~~~GNt~sAsi~~~L~~~ 349 (379)
T PLN02326 275 FKFAVRCVPQVIESALQKAGLTAESI--DWLLLHQANQRIIDAVAQRLGIPPEKVISN---LANYGNTSAASIPLALDEA 349 (379)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHC--CEEEECCCCHHHHHHHHHHcCCCHHHeeec---HhhcCcHHHHHHHHHHHHH
Confidence 335678899999999999999997 399999999999999999999999999764 8999999999999999999
Q ss_pred HHhchhcCCCCCCCCCceEEEEeeccchhhhheeeee
Q 047978 278 RKRSVEEGKATTGEELEWGVLLGFEAGLTVEAIVLRS 314 (320)
Q Consensus 278 ~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~~l~~ 314 (320)
+++ |++++| |++|+++||+|++|++++++|
T Consensus 350 ~~~----g~~~~G---d~vll~~~G~G~t~~~~ll~~ 379 (379)
T PLN02326 350 VRS----GKVKKG---DVIATAGFGAGLTWGSAIVRW 379 (379)
T ss_pred HHc----CCCCCC---CEEEEEEEChhheeeEEEEEC
Confidence 998 999999 999999999999999999987
No 12
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=1.1e-46 Score=349.33 Aligned_cols=285 Identities=21% Similarity=0.214 Sum_probs=228.9
Q ss_pred cceEEccccccCCCcccccccHHHHHhhhcCCch---hHHHHHHHHHhhhcccchHHHHHHHHHHHHHHcCCCCCCcCEE
Q 047978 5 GKFQETQRPQANPANCVYQTDYPDFYFRITSSNH---MTELKEKFKRMYILVPKVPKLGKEAVSKAIKEWGQPISKITHL 81 (320)
Q Consensus 5 ~~~~I~a~~~~lP~~~i~~~e~~~~~~~~~~~~~---~~gi~~~~r~~~~~~e~~~~la~~Aa~~aL~~ag~~~~dId~l 81 (320)
.+++|.++++|+|+++++|+|+.+.+ +...++ .+||.+ ||++. +++..+|+.+|+++||+++|++|+|||+|
T Consensus 3 ~~~~I~~~g~~lP~~~v~~~~~~~~~--~~~~~~i~~~~Gi~~--R~~~~-~~~~~~la~~Aa~~aL~~ag~~~~dId~l 77 (329)
T PRK07204 3 RYISIKGIGTYLPKRKVDSLELDKKL--DLPEGWVLKKSGVKT--RHFVD-GETSSYMGAEAAKKAVEDAKLTLDDIDCI 77 (329)
T ss_pred CCcEEEEEEEeCCCceecHHHHHHhh--CCCHhHhhhccCceE--EeecC-CCCHHHHHHHHHHHHHHHcCCCHHHCCEE
Confidence 45899999999999999999999876 333344 356776 78776 89999999999999999999999999999
Q ss_pred EEEeeCC-CCCCCHHHHHHHHcCCCcc---------hhhhhhh--------hhcCCCCeEEEEEeecccccccCCCCCCc
Q 047978 82 ISCSVSG-VDMPGADYQLTKLLGLKPS---------VKRVMLT--------AESNAGARVLVVCSEITVGTFRAPSDENL 143 (320)
Q Consensus 82 i~~s~t~-~~~p~~a~~l~~~LGl~~~---------~c~~~l~--------l~~~~~~~~LVv~~e~~s~~~~~~~~~~~ 143 (320)
|++|+++ +..|+.+.+|+++||+++. .|+++++ ++++..+++|||++|.++. ..++.+
T Consensus 78 i~~~~~~~~~~p~~a~~v~~~lgl~~~~~~~~~v~~~C~~~~~al~~a~~~l~~g~~~~~Lvv~~e~~s~-~~~~~~--- 153 (329)
T PRK07204 78 ICASGTIQQAIPCTASLIQEQLGLQHSGIPCFDINSTCLSFITALDTISYAIECGRYKRVLIISSEISSV-GLNWGQ--- 153 (329)
T ss_pred EEECCCCCCCCccHHHHHHHHhCCCCCCceEEEccchhHHHHHHHHHHHHHHHCCCCCEEEEEEeccccC-CCCccc---
Confidence 9999998 7789999999999999852 3777654 6778899999999999886 444433
Q ss_pred hhhhhhhhhccCceEEEEeecCCC-CCCCCeeEEeccC-----------ceecCCCccc----ccccccccc-----eec
Q 047978 144 SCLVNRAIVGDGTAALIVGACPDI-NTERPLFHIVPTA-----------QTILPDSEDA----IKGHFRESP-----LIA 202 (320)
Q Consensus 144 ~~~~~~~~~GDgAaA~ll~~~~~~-~~~~~~~~~~~~~-----------~~~~p~~~~~----~~~~~~~~g-----~~~ 202 (320)
..+..+|||||+|+||++++.. .+. ...+.+.+ ....|..... ....+.++| +..
T Consensus 154 --~~~~~lfGDGAaA~ll~~~~~~~~il--~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (329)
T PRK07204 154 --NESCILFGDGAAAVVITKGDHSSRIL--ASHMETYSSGAHLSEIRGGGTMIHPREYSEERKEDFLFDMNGRAIFKLSS 229 (329)
T ss_pred --CcceEEEecccEEEEEEEcCCCCcEE--EEEEEEecCCCCceEEecCCcCCCCcccccccccCceEEECCHHHHHHHH
Confidence 2357899999999999987653 111 01111111 1111211110 011233444 334
Q ss_pred hhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHHHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHHhch
Q 047978 203 DNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSV 282 (320)
Q Consensus 203 ~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~ 282 (320)
+.++++++++|+++|++++|+ ++|++||+|.++++.+++.|++|+||+.. ++++|||+++||+|++|++++++
T Consensus 230 ~~~~~~i~~~L~~~gl~~~di--d~~~~H~~~~~~~~~i~~~l~l~~e~~~~---~~~~~Gn~~sas~~~~L~~~~~~-- 302 (329)
T PRK07204 230 KYLMKFIDKLLMDAGYTLADI--DLIVPHQASGPAMRLIRKKLGVDEERFVT---IFEDHGNMIAASIPVALFEAIKQ-- 302 (329)
T ss_pred HHHHHHHHHHHHHcCCCHHHC--CEEEeCCCCHHHHHHHHHHcCCCHHHhhh---hHhhhCcHHHHHHHHHHHHHHHc--
Confidence 568899999999999999997 39999999999999999999999999875 69999999999999999999998
Q ss_pred hcCCCCCCCCCceEEEEeeccchhhhheeeee
Q 047978 283 EEGKATTGEELEWGVLLGFEAGLTVEAIVLRS 314 (320)
Q Consensus 283 ~~g~l~~G~~~d~vll~~~G~G~~~~a~~l~~ 314 (320)
|++++| |++++++||+|++|+++++||
T Consensus 303 --g~~~~G---d~vll~~~G~G~s~~~~ll~~ 329 (329)
T PRK07204 303 --KKVQRG---NKILLLGTSAGLSIGGILLEY 329 (329)
T ss_pred --CCCCCC---CEEEEEEEchhhhheeeEEeC
Confidence 999999 999999999999999999986
No 13
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=100.00 E-value=8.4e-47 Score=349.70 Aligned_cols=284 Identities=21% Similarity=0.291 Sum_probs=228.3
Q ss_pred eEEccccccCCCcccccccHHHHHhhhcCCch---hHHHHHHHHHhhhcccchHHHHHHHHHHHHHHcCCCCCCcCEEEE
Q 047978 7 FQETQRPQANPANCVYQTDYPDFYFRITSSNH---MTELKEKFKRMYILVPKVPKLGKEAVSKAIKEWGQPISKITHLIS 83 (320)
Q Consensus 7 ~~I~a~~~~lP~~~i~~~e~~~~~~~~~~~~~---~~gi~~~~r~~~~~~e~~~~la~~Aa~~aL~~ag~~~~dId~li~ 83 (320)
++|.++|.|+|+++++|+|+++.+ ..+.++ .+||.+ ||++.++++..+|+.+|+++||+++|++|+|||.||+
T Consensus 3 v~I~~~g~~lP~~~v~~~e~~~~~--~~~~~~i~~~~gi~~--r~~~~~~~~~~~la~~A~~~aL~~ag~~~~dId~vi~ 78 (326)
T CHL00203 3 VHILSTGSSVPNFSVENQQFEDII--ETSDHWISTRTGIKK--RHLAPSSTSLTKLAAEAANKALDKAHMDPLEIDLIIL 78 (326)
T ss_pred cEEEEEEEECCCeEEcHHHHHHhc--CCChhhEeeccCeEE--EEeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 799999999999999999999887 333344 367776 7888889999999999999999999999999999999
Q ss_pred EeeCCCCCCCHHHHHHHHcCCCcc-------hhhhhhh--------hhcCCCCeEEEEEeecccccccCCCCCCchhhhh
Q 047978 84 CSVSGVDMPGADYQLTKLLGLKPS-------VKRVMLT--------AESNAGARVLVVCSEITVGTFRAPSDENLSCLVN 148 (320)
Q Consensus 84 ~s~t~~~~p~~a~~l~~~LGl~~~-------~c~~~l~--------l~~~~~~~~LVv~~e~~s~~~~~~~~~~~~~~~~ 148 (320)
+|+++...+..+.+++++||+++. .|+++++ ++++..+++|||++|..+. ..+++++ .+
T Consensus 79 ~s~~~~~~~~~~~~v~~~Lg~~~~~~~~v~~~Casg~~al~~A~~~i~sg~~~~~Lvv~~e~~s~-~~~~~~~-----~~ 152 (326)
T CHL00203 79 ATSTPDDLFGSASQLQAEIGATRAVAFDITAACSGFILALVTATQFIQNGSYKNILVVGADTLSK-WIDWSDR-----KT 152 (326)
T ss_pred EeCCCCCCCchHHHHHHHhCCCCCceeeecccchhHHHHHHHHHHHHHcCCCCEEEEEEehhhhC-cCCcccC-----Cc
Confidence 998883334567899999999764 2766544 6789999999999999986 5556542 34
Q ss_pred hhhhccCceEEEEeecCCCCCCCCeeEEeccCce----ecCC--------C-----cccccccccccc-----eechhHH
Q 047978 149 RAIVGDGTAALIVGACPDINTERPLFHIVPTAQT----ILPD--------S-----EDAIKGHFRESP-----LIADNID 206 (320)
Q Consensus 149 ~~~~GDgAaA~ll~~~~~~~~~~~~~~~~~~~~~----~~p~--------~-----~~~~~~~~~~~g-----~~~~~~~ 206 (320)
..+|||||+|+||++++..++. .+.+.+.+.. .++. . .+.. ..++++| +..+.++
T Consensus 153 ~~~fgDga~A~ll~~~~~~~~~--~~~~~t~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~ 229 (326)
T CHL00203 153 CILFGDGAGAAIIGASYENSIL--GFKLCTDGKLNSHLQLMNKPVNNQSFGTTKLPQGQY-QSISMNGKEVYKFAVFQVP 229 (326)
T ss_pred eEEEcceeeEEEEEEcCCCCeE--EEEEEEcCCCcceEEecCCCCCcccccccccccCCc-ceEEECCHHHHHHHHHHHH
Confidence 7899999999999987653221 1222222211 1110 0 0000 1234445 2235688
Q ss_pred HHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHHHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCC
Q 047978 207 KFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGK 286 (320)
Q Consensus 207 ~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~ 286 (320)
++++++|+++|++++|| ++|++||+|.++++.+++.||+|+||+.. ++++|||++||++|++|++++++ |+
T Consensus 230 ~~i~~~L~~~g~~~~di--d~~~~hq~~~~~~~~~~~~lgl~~~k~~~---~l~~~Gn~~sasi~~~L~~~~~~----g~ 300 (326)
T CHL00203 230 AVIIKCLNALNISIDEV--DWFILHQANKRILEAIANRLSVPNSKMIT---NLEKYGNTSAASIPLALDEAIQN----NK 300 (326)
T ss_pred HHHHHHHHHcCCCHHHC--CEEEECCCCHHHHHHHHHHhCCCHHHhhh---HHHhhCcHHHHHHHHHHHHHHHh----CC
Confidence 99999999999999997 39999999999999999999999999976 59999999999999999999998 99
Q ss_pred CCCCCCCceEEEEeeccchhhhheeeeec
Q 047978 287 ATTGEELEWGVLLGFEAGLTVEAIVLRSI 315 (320)
Q Consensus 287 l~~G~~~d~vll~~~G~G~~~~a~~l~~~ 315 (320)
+++| |++++++||+|++|+++++||+
T Consensus 301 ~~~G---d~vll~~~G~G~s~~~~v~~~~ 326 (326)
T CHL00203 301 IQPG---QIIVLSGFGAGLTWGAIVLKWK 326 (326)
T ss_pred CCCC---CEEEEEEEchhhhheEEEEEeC
Confidence 9999 9999999999999999999995
No 14
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=1.5e-46 Score=347.83 Aligned_cols=287 Identities=21% Similarity=0.247 Sum_probs=231.0
Q ss_pred cceEEccccccCCCcccccccHHHHHhhhcCCch---hHHHHHHHHHhhhcccchHHHHHHHHHHHHHHcCCCCCCcCEE
Q 047978 5 GKFQETQRPQANPANCVYQTDYPDFYFRITSSNH---MTELKEKFKRMYILVPKVPKLGKEAVSKAIKEWGQPISKITHL 81 (320)
Q Consensus 5 ~~~~I~a~~~~lP~~~i~~~e~~~~~~~~~~~~~---~~gi~~~~r~~~~~~e~~~~la~~Aa~~aL~~ag~~~~dId~l 81 (320)
.+++|.++++|+|+++++++|+.+.+ ..+.++ .+||.+ ||++.++++..+|+.+|+++||+++|++++|||+|
T Consensus 3 ~~~~I~~ig~~~P~~~v~~~e~~~~~--~~~~~~i~~~~Gi~~--r~~~~~~~~~~~la~~A~~~al~~ag~~~~~Id~l 78 (325)
T PRK12879 3 SYARITGIGTYVPPRVLTNDDLETFI--DTSDEWIVQRTGIKE--RRIAHVEEYTSDLAIKAAERALARAGLDAEDIDLI 78 (325)
T ss_pred CCCEEEEEEEECCCcEEcHHHHHHhc--CCCHHHhhhccCceE--EEECCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEE
Confidence 36899999999999999999999876 333333 357776 88888899999999999999999999999999999
Q ss_pred EEEeeCC-CCCCCHHHHHHHHcCCCcc-------hhhhhhh--------hhcCCCCeEEEEEeecccccccCCCCCCchh
Q 047978 82 ISCSVSG-VDMPGADYQLTKLLGLKPS-------VKRVMLT--------AESNAGARVLVVCSEITVGTFRAPSDENLSC 145 (320)
Q Consensus 82 i~~s~t~-~~~p~~a~~l~~~LGl~~~-------~c~~~l~--------l~~~~~~~~LVv~~e~~s~~~~~~~~~~~~~ 145 (320)
|++|+++ +..|+.+.+|++.||+++. .|++++. ++++..++||||++|.++. +.++.+
T Consensus 79 i~~~~~~~~~~~~~a~~l~~~lg~~~~~~~~v~~~C~~~~~al~~A~~~l~~g~~~~~Lvv~~e~~s~-~~~~~~----- 152 (325)
T PRK12879 79 IVATTTPDYLFPSTASQVQARLGIPNAAAFDINAACAGFLYGLETANGLITSGLYKKVLVIGAERLSK-VTDYTD----- 152 (325)
T ss_pred EEEcCCCCCCCChHHHHHHHHhCCCCCcEEEECccchHHHHHHHHHHHHHHcCCCCEEEEEEehhhcC-cCCccc-----
Confidence 9999998 8899999999999999863 3766543 6788999999999999886 444433
Q ss_pred hhhhhhhccCceEEEEeecCCC-CCCCCeeEEeccCc-----------eecCCCcccccccccccc-----eechhHHHH
Q 047978 146 LVNRAIVGDGTAALIVGACPDI-NTERPLFHIVPTAQ-----------TILPDSEDAIKGHFRESP-----LIADNIDKF 208 (320)
Q Consensus 146 ~~~~~~~GDgAaA~ll~~~~~~-~~~~~~~~~~~~~~-----------~~~p~~~~~~~~~~~~~g-----~~~~~~~~~ 208 (320)
+....+|||||+|+||++++.. ++.. ..+.+.+. ...+.+.......+.++| ...+.++++
T Consensus 153 ~~~~~~~GDgAaA~ll~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (325)
T PRK12879 153 RTTCILFGDGAGAVVLEATENEPGFID--YVLGTDGDGGDILYRTGLGTTMDRDALSGDGYIVQNGREVFKWAVRTMPKG 230 (325)
T ss_pred cCceEEEeecceEEEEEecCCCCCeEE--EEEEEcCCCCCeEEEcCCCCCCCccccccCccEEEcCHHHHHHHHHHHHHH
Confidence 2346899999999999998753 2111 11111111 011111111122344444 234667889
Q ss_pred HHHHhhhcCCCCCCCCceEEEEcCCChhHHHHHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCC
Q 047978 209 LAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKAT 288 (320)
Q Consensus 209 i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~ 288 (320)
++++|+++|++++|+ .+|++||+|+++++.+.+.||+|++|+.. ++++|||+++||+|++|++++++ |+++
T Consensus 231 i~~~L~~~g~~~~di--d~~~~h~~~~~~~~~~~~~lg~~~~~~~~---~~~~~Gn~~sas~~~~L~~~~~~----g~~~ 301 (325)
T PRK12879 231 ARQVLEKAGLTKDDI--DWVIPHQANLRIIESLCEKLGIPMEKTLV---SVEYYGNTSAATIPLALDLALEQ----GKIK 301 (325)
T ss_pred HHHHHHHcCCCHHHC--CEEEECCCCHHHHHHHHHHcCCCHHHhhh---hHhhhCchHHHHHHHHHHHHHHc----CCCC
Confidence 999999999999986 39999999999999999999999999987 48999999999999999999998 9999
Q ss_pred CCCCCceEEEEeeccchhhhheeeeec
Q 047978 289 TGEELEWGVLLGFEAGLTVEAIVLRSI 315 (320)
Q Consensus 289 ~G~~~d~vll~~~G~G~~~~a~~l~~~ 315 (320)
+| |+++++++|+|++++++++||+
T Consensus 302 ~G---d~vll~~~G~G~~~~~~l~~~~ 325 (325)
T PRK12879 302 PG---DTLLLYGFGAGLTWAALLVKWG 325 (325)
T ss_pred CC---CEEEEEEEchhhhhEEEEEEeC
Confidence 99 9999999999999999999994
No 15
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=1.1e-45 Score=343.97 Aligned_cols=292 Identities=18% Similarity=0.169 Sum_probs=228.6
Q ss_pred cceEEccccccCCCcccccccHHHHHhhh-----cCCch---hHHHHHHHHHhhhcccchHHHHHHHHHHHHHHcCCCCC
Q 047978 5 GKFQETQRPQANPANCVYQTDYPDFYFRI-----TSSNH---MTELKEKFKRMYILVPKVPKLGKEAVSKAIKEWGQPIS 76 (320)
Q Consensus 5 ~~~~I~a~~~~lP~~~i~~~e~~~~~~~~-----~~~~~---~~gi~~~~r~~~~~~e~~~~la~~Aa~~aL~~ag~~~~ 76 (320)
++++|.++++|+|+++++|+|+.+.+... .+.++ .+||.+ ||+..+++++.+|+.+|+++||+++|++++
T Consensus 4 ~~v~I~~~g~~lP~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~--R~~~~~~~~~~~la~~Aa~~aL~~ag~~~~ 81 (338)
T PRK09258 4 SNVAILSLAYELAPVVVTSSEIEERLAPLYERLRLPPGQLEALTGIRE--RRWWPEGTQLSDGAIAAGRKALAEAGIDPS 81 (338)
T ss_pred cceEEEEEEecCCCccCcHHHHHHHhhhcccccCCChhHhhhhcCcee--EecCCCCCCHHHHHHHHHHHHHHHcCCCHH
Confidence 56999999999999999999999875211 12232 346776 788877899999999999999999999999
Q ss_pred CcCEEEEEeeCC-CCCCCHHHHHHHHcCCCcc--------hhhhhhh--------hhcCCCCeEEEEEeecccccccCCC
Q 047978 77 KITHLISCSVSG-VDMPGADYQLTKLLGLKPS--------VKRVMLT--------AESNAGARVLVVCSEITVGTFRAPS 139 (320)
Q Consensus 77 dId~li~~s~t~-~~~p~~a~~l~~~LGl~~~--------~c~~~l~--------l~~~~~~~~LVv~~e~~s~~~~~~~ 139 (320)
|||+||++|+++ +..|+.+.+|+++||+++. .|+++++ ++++..++||||++|+.+. +.++.
T Consensus 82 ~Id~li~~s~~~~~~~p~~a~~v~~~lgl~~~~~~~~v~~~C~~~~~al~~A~~~i~~g~~~~~Lvv~~e~~s~-~~~~~ 160 (338)
T PRK09258 82 DIGLLINTSVCRDYLEPATACRVHHNLGLPKSCANFDVSNACLGFLNGMLDAANMIELGQIDYALVVSGESARE-IVEAT 160 (338)
T ss_pred HCCEEEEEcCCCCCCCChHHHHHHHHcCCCCCCceeehhhhhHHHHHHHHHHHHHHHcCCCCEEEEEEecccch-hccch
Confidence 999999999998 8899999999999999752 2777654 6788999999999999886 33221
Q ss_pred ------CC----CchhhhhhhhhccCceEEEEeecCCCCCCCCeeEEeccCceecCCCccccc---ccccccc-----ee
Q 047978 140 ------DE----NLSCLVNRAIVGDGTAALIVGACPDINTERPLFHIVPTAQTILPDSEDAIK---GHFRESP-----LI 201 (320)
Q Consensus 140 ------~~----~~~~~~~~~~~GDgAaA~ll~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~---~~~~~~g-----~~ 201 (320)
+. .....+...+|||||+|+||++++.... ..++........++..+.+. ..+.+++ ..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~GDGA~A~ll~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (338)
T PRK09258 161 IDRLLAPETTREDFAQSFATLTLGSGAAAAVLTRGSLHPR---GHRLLGGVTRAATEHHELCQGGRDGMRTDAVGLLKEG 237 (338)
T ss_pred hhhhccCccchhhhhhccceEEecccceEEEEecCCCCCC---cceeeeeeeecCCCcccccccCccceEEcHHHHHHHH
Confidence 11 0111233578999999999998754210 12222211122222111111 1233343 22
Q ss_pred chhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHHHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHHhc
Q 047978 202 ADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRS 281 (320)
Q Consensus 202 ~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~ 281 (320)
.+.++++++++|+++|++++|| ++|++||+|+++++.+.+.|++|++|++.+ +++||||+++|+|++|++++++
T Consensus 238 ~~~~~~~~~~~L~~~g~~~~di--d~~i~H~~~~~~~~~~~~~lgl~~~k~~~~---~~~~GN~~sas~~~~L~~~~~~- 311 (338)
T PRK09258 238 VELAVDTWEAFLAQLGWAVEQV--DRVICHQVGAAHTRAILKALGIDPEKVFTT---FPTLGNMGPASLPITLAMAAEE- 311 (338)
T ss_pred HHHHHHHHHHHHHHcCCCHHHC--CEEecCCCCHHHHHHHHHHhCCCHHHceeh---HhhhCCcHHhHHHHHHHHHHHh-
Confidence 4567788999999999999987 399999999999999999999999999875 8999999999999999999998
Q ss_pred hhcCCCCCCCCCceEEEEeeccchhhhheeeee
Q 047978 282 VEEGKATTGEELEWGVLLGFEAGLTVEAIVLRS 314 (320)
Q Consensus 282 ~~~g~l~~G~~~d~vll~~~G~G~~~~a~~l~~ 314 (320)
|++++| |++++++||+|++++++++||
T Consensus 312 ---g~~~~G---d~vll~~~G~G~s~~~~~~~~ 338 (338)
T PRK09258 312 ---GFLKPG---DRVALLGIGSGLNCSMLEVKW 338 (338)
T ss_pred ---CCCCCC---CEEEEEEechhHhhHhHeeeC
Confidence 999999 999999999999999999997
No 16
>PRK04262 hypothetical protein; Provisional
Probab=100.00 E-value=3.7e-44 Score=334.53 Aligned_cols=279 Identities=18% Similarity=0.184 Sum_probs=221.8
Q ss_pred ceEEccccccCCCcccccccHHHHHhhhcCCchh---HHHHHHHHHhhhcccchHHHHHHHHHHHHHHcCCCCCCcCEEE
Q 047978 6 KFQETQRPQANPANCVYQTDYPDFYFRITSSNHM---TELKEKFKRMYILVPKVPKLGKEAVSKAIKEWGQPISKITHLI 82 (320)
Q Consensus 6 ~~~I~a~~~~lP~~~i~~~e~~~~~~~~~~~~~~---~gi~~~~r~~~~~~e~~~~la~~Aa~~aL~~ag~~~~dId~li 82 (320)
+++|.+++.|+|+++++|+|+.+.+ +.+.+|+ +||.+ ||++.++++..+|+.+|+++||+++|++++|||+||
T Consensus 2 ~v~I~~~g~ylP~~~v~~~el~~~~--~~~~~~i~~~~Gi~~--R~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li 77 (347)
T PRK04262 2 MVGIVGYGAYIPRYRIKVEEIARVW--GDDPEAIKRGLGVEE--KSVPGPDEDTATIAVEAARNALKRAGIDPKEIGAVY 77 (347)
T ss_pred ceeEEEEEEeCCCEEecHHHHHHHh--CcCHHHHhhccCeee--eecCCCCcCHHHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 4799999999999999999999987 4555653 57777 899988999999999999999999999999999999
Q ss_pred EEeeCC-CCCCCHHHHHHHHcCCCcc--------hhhhhhh--------hhcCCCCeEEEEEeecccccccCCCCCCchh
Q 047978 83 SCSVSG-VDMPGADYQLTKLLGLKPS--------VKRVMLT--------AESNAGARVLVVCSEITVGTFRAPSDENLSC 145 (320)
Q Consensus 83 ~~s~t~-~~~p~~a~~l~~~LGl~~~--------~c~~~l~--------l~~~~~~~~LVv~~e~~s~~~~~~~~~~~~~ 145 (320)
++|+++ +..|+.+.+|+++||+++. .|+++++ ++++..+++|||++|+.. .+|.+.
T Consensus 78 ~~s~~~~~~~p~~a~~v~~~Lgl~~~~~~~dv~~~C~~~~~aL~~A~~~i~sg~~~~aLVv~~e~~~---~~~~~~---- 150 (347)
T PRK04262 78 VGSESHPYAVKPTATIVAEALGATPDLTAADLEFACKAGTAALQAAMGLVKSGMIKYALAIGADTAQ---GAPGDA---- 150 (347)
T ss_pred EEecCCCcccccHHHHHHHHcCCCCCceEEEHHHhHHHHHHHHHHHHHHHHcCCCCEEEEEEEeeec---cCCCCC----
Confidence 999998 7889999999999999752 2777654 678999999999999842 234432
Q ss_pred hhhhhhhccCceEEEEeecCCCCCCCCeeEEeccCceecCCCcccc----------cccccccceechhHHHHHHHHhhh
Q 047978 146 LVNRAIVGDGTAALIVGACPDINTERPLFHIVPTAQTILPDSEDAI----------KGHFRESPLIADNIDKFLAESFDQ 215 (320)
Q Consensus 146 ~~~~~~~GDgAaA~ll~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~----------~~~~~~~g~~~~~~~~~i~~~l~~ 215 (320)
. ...|||||+|+||++++.. .++.+.... .++..+.+ ...+.....+.+.++++++++|++
T Consensus 151 -~-~~~~GDGA~A~ll~~~~~~------~~i~~~~~~-~~d~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~ 221 (347)
T PRK04262 151 -L-EYTAAAGGAAFIIGKEEVI------AEIEATYSY-TTDTPDFWRREGEPYPRHGGRFTGEPAYFKHIISAAKGLMEK 221 (347)
T ss_pred -C-CCcCCCCcEEEEEecCccc------ceeeccccc-cccchhhcCCCCCcCCCcCceecchHHHHHHHHHHHHHHHHH
Confidence 1 2467999999999975432 122211100 11111000 000110001236788999999999
Q ss_pred cCCCCCCCCceEEEEcCCChhHHHHHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCCCCCCce
Q 047978 216 VSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEW 295 (320)
Q Consensus 216 ~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~ 295 (320)
+|++++|| .+|++||+|.++++.+++.|++|++|+..++ ++++||||++||+|++|+++++. +++| |+
T Consensus 222 ~gl~~~dI--d~~v~Hq~n~~~~~~~~~~Lgl~~ek~~~~~-~~~~~GNt~sAsi~~~L~~~~~~------~~~G---d~ 289 (347)
T PRK04262 222 LGLKPSDY--DYAVFHQPNGKFPLRVAKMLGFTKEQVKPGL-LTPYIGNTYSGSALLGLAAVLDV------AKPG---DR 289 (347)
T ss_pred hCcCHHHh--ceeecCCCchHHHHHHHHHcCCCHHHhhccc-hhhhhCChHHHHHHHHHHHHHHh------CCCC---CE
Confidence 99999986 3999999999999999999999999998653 47999999999999999999863 6789 99
Q ss_pred EEEEeeccchhhhheeeeecc
Q 047978 296 GVLLGFEAGLTVEAIVLRSIP 316 (320)
Q Consensus 296 vll~~~G~G~~~~a~~l~~~~ 316 (320)
+|+++||+|+++++++++|++
T Consensus 290 vll~~~G~G~~~~~~~~~~~~ 310 (347)
T PRK04262 290 ILVVSFGSGAGSDAFSITVTD 310 (347)
T ss_pred EEEEecCCCcceeeEEEEech
Confidence 999999999999999999864
No 17
>PRK06840 hypothetical protein; Validated
Probab=100.00 E-value=4e-44 Score=333.56 Aligned_cols=289 Identities=15% Similarity=0.117 Sum_probs=223.0
Q ss_pred ceEEccccccCCCcccccccHHHHHhhhcCCch---hHHHHHHHHHhhhcccchHHHHHHHHHHHHHHcCCCCCCcCEEE
Q 047978 6 KFQETQRPQANPANCVYQTDYPDFYFRITSSNH---MTELKEKFKRMYILVPKVPKLGKEAVSKAIKEWGQPISKITHLI 82 (320)
Q Consensus 6 ~~~I~a~~~~lP~~~i~~~e~~~~~~~~~~~~~---~~gi~~~~r~~~~~~e~~~~la~~Aa~~aL~~ag~~~~dId~li 82 (320)
+++|.+++.|+|+++++|+|+.+.. +.+.++ .+|+.+ ||++.++++..+|+.+|+++||+++|++|+|||+||
T Consensus 4 ~v~I~~~~~~lP~~~v~~~~l~~~~--g~~~~~~~~~~Gi~~--r~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li 79 (339)
T PRK06840 4 NVGIVGTGVYLPKDVMTAEEIAEKT--GIPEEVVIEKFGIYE--KPVPGPEDHTSDMAIAAAKPALKQAGVDPAAIDVVI 79 (339)
T ss_pred ceEEEEEEEeCCCcccCHHHHHHHh--CCCHHHHhhhcCcce--EeeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 6899999999999999999999886 333333 256666 888888899999999999999999999999999999
Q ss_pred EEeeC-C-CCCCCHHHHHHHHcCCCcc-------hhhhhhh--------hhc-CCCCeEEEEEeecccccccCCCCCCch
Q 047978 83 SCSVS-G-VDMPGADYQLTKLLGLKPS-------VKRVMLT--------AES-NAGARVLVVCSEITVGTFRAPSDENLS 144 (320)
Q Consensus 83 ~~s~t-~-~~~p~~a~~l~~~LGl~~~-------~c~~~l~--------l~~-~~~~~~LVv~~e~~s~~~~~~~~~~~~ 144 (320)
+++++ + +..|+.+.+|+++||+++. .|+++++ +++ +..+++|||++|+.++ +.++.++.
T Consensus 80 ~~~~~~~~~~~p~~a~~l~~~lGl~~~~~~~v~~~C~~~~~al~~A~~~l~~~g~~~~~Lvv~~~~~s~-~~~~~~~~-- 156 (339)
T PRK06840 80 YIGSEHKDYPVWSSAPKIQHEIGAKNAWAFDIMAVCASFPIALKVAKDLLYSDPSIENVLLVGGYRNSD-LVDYDNPR-- 156 (339)
T ss_pred EeccCCCCCCCCchHHHHHHHhCCCCcccccccccchHHHHHHHHHHHHHhcCCCccEEEEEeeccccc-ccCcCCCC--
Confidence 88764 4 6799999999999999764 2766654 666 7789999999999886 44443321
Q ss_pred hhhhhhhhccCceEEEEeecCCC-CCCCCeeEEeccCc----eecCC-------Ccccc---cccccccc---e------
Q 047978 145 CLVNRAIVGDGTAALIVGACPDI-NTERPLFHIVPTAQ----TILPD-------SEDAI---KGHFRESP---L------ 200 (320)
Q Consensus 145 ~~~~~~~~GDgAaA~ll~~~~~~-~~~~~~~~~~~~~~----~~~p~-------~~~~~---~~~~~~~g---~------ 200 (320)
.. ....|||||+|+||++++.. ++.. ..+.+.+. ...|. ..+.. ...+.+.+ +
T Consensus 157 ~~-~~~~~GDgAaA~ll~~~~~~~~il~--~~~~t~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (339)
T PRK06840 157 TR-FMFNFAAGGSAALLKKDAGKNRILG--SAIITDGSFSEDVRVPAGGTKQPASPETVENRQHYLDVIDPESMKERLDE 233 (339)
T ss_pred ee-eeccCCCceeEEEEEecCCCCceEE--EEEEEcCCccceEEecCCCcCCCCcccccccccceEEEcCcHHHHHHhHh
Confidence 11 11347999999999987653 1110 11222111 11121 10000 01111111 1
Q ss_pred -echhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHHHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHH
Q 047978 201 -IADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRK 279 (320)
Q Consensus 201 -~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~ 279 (320)
....++++++++|+++|++++|| ++|++||.|+++++.+++.|++|++|+. ++++||||++|++|++|+++++
T Consensus 234 ~~~~~~~~~i~~~L~~~gl~~~di--d~~~~h~~~~~~~~~~~~~Lgl~~~~~~----~~~~~Gn~~sas~~~~L~~~~~ 307 (339)
T PRK06840 234 VSIPNFLKVIREALRKSGYTPKDI--DYLAILHMKRSAHIALLEGLGLTEEQAI----YLDEYGHLGQLDQILSLHLALE 307 (339)
T ss_pred hHHHHHHHHHHHHHHHcCCCHHHC--CEEEECCcCHHHHHHHHHHcCCCHHHeE----eHHhccchhhhhHHHHHHHHHH
Confidence 12356789999999999999997 3899999999999999999999999985 3899999999999999999999
Q ss_pred hchhcCCCCCCCCCceEEEEeeccchhhhheeeeeccC
Q 047978 280 RSVEEGKATTGEELEWGVLLGFEAGLTVEAIVLRSIPM 317 (320)
Q Consensus 280 ~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~~l~~~~~ 317 (320)
+ |++++| |++++++||+|++|+++++||.|-
T Consensus 308 ~----~~~~~G---d~ill~~~G~G~s~~~~~l~~~~~ 338 (339)
T PRK06840 308 Q----GKLKDG---DLVVLVSAGTGYTWAATVIRWGPV 338 (339)
T ss_pred c----CCCCCC---CEEEEEEEehhhheeEEEEEecCC
Confidence 8 999999 999999999999999999999763
No 18
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=100.00 E-value=3.7e-44 Score=331.06 Aligned_cols=283 Identities=22% Similarity=0.270 Sum_probs=225.5
Q ss_pred ceEEccccccCCCcccccccHHHHHhhhcCCch---hHHHHHHHHHhhhcccchHHHHHHHHHHHHHHcCCCCCCcCEEE
Q 047978 6 KFQETQRPQANPANCVYQTDYPDFYFRITSSNH---MTELKEKFKRMYILVPKVPKLGKEAVSKAIKEWGQPISKITHLI 82 (320)
Q Consensus 6 ~~~I~a~~~~lP~~~i~~~e~~~~~~~~~~~~~---~~gi~~~~r~~~~~~e~~~~la~~Aa~~aL~~ag~~~~dId~li 82 (320)
+++|.++++|+|+++++++|+.+.+ ..+.++ ..|+.+ ||++.+++++.+|+.+|++++|+++|+++++||.||
T Consensus 1 ~~~I~~i~~~lP~~~~~~~~~~~~~--~~~~~~~~~~~Gi~~--r~~~~~~~~~~~la~~A~~~al~~ag~~~~~Id~li 76 (320)
T cd00830 1 NARILGIGSYLPERVVTNDELEKRL--DTSDEWIRTRTGIRE--RRIADPGETTSDLAVEAAKKALEDAGIDADDIDLII 76 (320)
T ss_pred CCEEEEEEEECCCcEEcHHHHHHHc--CCCHHHhhhccCceE--EeeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 4799999999999999999999886 333333 356666 888888899999999999999999999999999999
Q ss_pred EEeeCC-CCCCCHHHHHHHHcCCCcch-------hhhhhh--------hhcCCCCeEEEEEeecccccccCCCCCCchhh
Q 047978 83 SCSVSG-VDMPGADYQLTKLLGLKPSV-------KRVMLT--------AESNAGARVLVVCSEITVGTFRAPSDENLSCL 146 (320)
Q Consensus 83 ~~s~t~-~~~p~~a~~l~~~LGl~~~~-------c~~~l~--------l~~~~~~~~LVv~~e~~s~~~~~~~~~~~~~~ 146 (320)
++|+++ +..|+.+.+|+++||+++.. |++++. +++++.+++|||++|..+. ..++.+ .
T Consensus 77 ~~~~~~~~~~~~~~~~l~~~lg~~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~vLvv~~e~~s~-~~~~~~-----~ 150 (320)
T cd00830 77 VATSTPDYLFPATACLVQARLGAKNAAAFDINAACSGFLYGLSTAAGLIRSGGAKNVLVVGAETLSR-ILDWTD-----R 150 (320)
T ss_pred EEcCCCCCCCCcHHHHHHHHhCCCCCcEeeccccchHHHHHHHHHHHHHHcCCCCEEEEEEehhhcc-ccCccc-----C
Confidence 999998 77899999999999996532 665433 6788899999999999986 443433 2
Q ss_pred hhhhhhccCceEEEEeecCCC-CCCCCeeEEeccCc----eecCCCcc--------cccccccccc-----eechhHHHH
Q 047978 147 VNRAIVGDGTAALIVGACPDI-NTERPLFHIVPTAQ----TILPDSED--------AIKGHFRESP-----LIADNIDKF 208 (320)
Q Consensus 147 ~~~~~~GDgAaA~ll~~~~~~-~~~~~~~~~~~~~~----~~~p~~~~--------~~~~~~~~~g-----~~~~~~~~~ 208 (320)
....+|||||+|+||++++.. ++. .+++.+.+. ..+|.... .....+.+++ ...+.++++
T Consensus 151 ~~~~~~GDgAaA~ll~~~~~~~~i~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (320)
T cd00830 151 STAVLFGDGAGAVVLEATEEDPGIL--DSVLGSDGSGADLLTIPAGGSRSPFEDAEGGDPYLVMDGREVFKFAVRLMPES 228 (320)
T ss_pred CceEEEeccceEEEEEecCCCCcEE--EEEEEEcCCCCCeEEeCCCCcCCccccccccCccEEEcChHHHHHHHHhhHHH
Confidence 357899999999999998652 221 112222211 11221100 0011222333 234667899
Q ss_pred HHHHhhhcCCCCCCCCceEEEEcCCChhHHHHHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCC
Q 047978 209 LAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKAT 288 (320)
Q Consensus 209 i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~ 288 (320)
++++|+++|++++|+ .+|++||+++++++.+++.||+|+||+.. ++++|||+++||+|++|++++++ |+++
T Consensus 229 i~~~l~~~g~~~~di--~~~~~h~~~~~~~~~~~~~lgl~~~~~~~---~~~~~Gn~~sas~~~~L~~~~~~----~~~~ 299 (320)
T cd00830 229 IEEALEKAGLTPDDI--DWFVPHQANLRIIEAVAKRLGLPEEKVVV---NLDRYGNTSAASIPLALDEAIEE----GKLK 299 (320)
T ss_pred HHHHHHHcCCCHHHC--CEEEECCCCHHHHHHHHHHhCCCHHHhhh---hHHhhCcHHHHHHHHHHHHHHHc----CCCC
Confidence 999999999999986 39999999999999999999999999976 59999999999999999999998 9999
Q ss_pred CCCCCceEEEEeeccchhhhheee
Q 047978 289 TGEELEWGVLLGFEAGLTVEAIVL 312 (320)
Q Consensus 289 ~G~~~d~vll~~~G~G~~~~a~~l 312 (320)
+| |+++++++|+|++|+++++
T Consensus 300 ~G---~~vll~~~G~G~~~~~~l~ 320 (320)
T cd00830 300 KG---DLVLLLGFGAGLTWGAALL 320 (320)
T ss_pred CC---CEEEEEEEchHHhhHHhhC
Confidence 99 9999999999999999875
No 19
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=100.00 E-value=1.1e-43 Score=330.65 Aligned_cols=285 Identities=15% Similarity=0.149 Sum_probs=220.1
Q ss_pred ceEEccccccCCCcccccccHHHHHhhhcCCchh---HHHHHHHHHhhhcccchHHHHHHHHHHHHHHcCCCCCCcCEEE
Q 047978 6 KFQETQRPQANPANCVYQTDYPDFYFRITSSNHM---TELKEKFKRMYILVPKVPKLGKEAVSKAIKEWGQPISKITHLI 82 (320)
Q Consensus 6 ~~~I~a~~~~lP~~~i~~~e~~~~~~~~~~~~~~---~gi~~~~r~~~~~~e~~~~la~~Aa~~aL~~ag~~~~dId~li 82 (320)
+++|.++|.|+|+++++|+++.+.+ +.+.+++ +||.+ ||++.+++++.+|+++|+++||+++|++++|||+||
T Consensus 1 ~~~I~g~g~~lP~~~v~n~~l~~~~--~~~~~~i~~~~Gi~~--r~v~~~~~~~~~la~~Aa~~aL~~agl~~~dID~li 76 (345)
T TIGR00748 1 MAGIVGYGAYIPMYRIKVEEIARVW--GKDPESISNGLPVEE--KAVPGLDEDTATIGVEAARNALKRAKIDPKDIGAVY 76 (345)
T ss_pred CccEEEEEEeCCCeeecHHHHHHHh--CCCHhHeeeccceee--eecCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 4689999999999999999999886 4445553 56776 889888999999999999999999999999999999
Q ss_pred EEeeCC-CCCCCHHHHHHHHcCCCcc--------hhhhhhh--------hhcCCCCeEEEEEeecccccccCCCCCCchh
Q 047978 83 SCSVSG-VDMPGADYQLTKLLGLKPS--------VKRVMLT--------AESNAGARVLVVCSEITVGTFRAPSDENLSC 145 (320)
Q Consensus 83 ~~s~t~-~~~p~~a~~l~~~LGl~~~--------~c~~~l~--------l~~~~~~~~LVv~~e~~s~~~~~~~~~~~~~ 145 (320)
++|+++ +..|+.+..+++.||+++. .|+++++ ++++..+++|||++|+.+. +|.+
T Consensus 77 ~~s~~~~~~~p~~a~~v~~~LGl~~~~~~~dv~~aC~g~~~al~~A~~~i~sg~~~~vLVv~~d~~~~---~~~~----- 148 (345)
T TIGR00748 77 VGSESHPYAVKPTATIVAEAIGATPDLTAADLEFACKAGTAGIQACMGLVASGMIKYGLAIGADTAQG---APGD----- 148 (345)
T ss_pred EEecCCCccccchHHHHHHHcCCCCCceEEEHHHhHHHHHHHHHHHHHHHHcCCCCEEEEEEEeeccc---CCCc-----
Confidence 999988 7889999999999999742 2776654 6789999999999999864 2433
Q ss_pred hhhhhhhccCceEEEEeecCCC-CCCCCeeEEeccC-ceecC-CCccc-ccccccccceechhHHHHHHHHhhhcCCCCC
Q 047978 146 LVNRAIVGDGTAALIVGACPDI-NTERPLFHIVPTA-QTILP-DSEDA-IKGHFRESPLIADNIDKFLAESFDQVSLNDH 221 (320)
Q Consensus 146 ~~~~~~~GDgAaA~ll~~~~~~-~~~~~~~~~~~~~-~~~~p-~~~~~-~~~~~~~~g~~~~~~~~~i~~~l~~~g~~~~ 221 (320)
. ....|||||+|+||++.+.. .+... +.....+ ....+ ..... ..........+.+.+.++++++|+++|++++
T Consensus 149 ~-~~~~~GDGAaA~vl~~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~ 226 (345)
T TIGR00748 149 A-LEYTAGAGGAAYIIGEKNTVAYFEGT-YSYTTDTPDFWRREGEPYPRHGGRFTGEPAYFHHVVTAAKGLMEKLGLTPE 226 (345)
T ss_pred c-CcccCCCceEEEEEccCCcceEeecc-cceecccccccccCCCcCCCcCCeecChHHHHHHHHHHHHHHHHHcCCCHH
Confidence 1 23668999999999976532 11000 0111111 00001 00000 0000000012345566888999999999999
Q ss_pred CCCceEEEEcCCChhHHHHHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCCCCCCceEEEEee
Q 047978 222 DWNSLFWMMHPIGPAVLDQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGF 301 (320)
Q Consensus 222 d~~~~~~i~h~~~~~~~~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~ 301 (320)
|| ++|++||+|.++++.+.+.||+|++|+..+. ..++||||++||+|++|+++++. +++| |+|++++|
T Consensus 227 di--d~~i~Hq~~~~~~~~~~~~lgl~~ek~~~~~-~~~~~GNt~sAsipl~L~~~~~~------~~~G---d~vll~~~ 294 (345)
T TIGR00748 227 DF--DYAVFHQPNGKFYLVAARMLGFPKEQVKPGL-LTPRIGNTYSGATPVGLSAVLDI------AEPG---DRILAVSY 294 (345)
T ss_pred Hc--CEEEeCCCChHHHHHHHHHcCCCHHHeeccc-cccccCchhhhHHHHHHHHHHHh------cCCC---CEEEEEEe
Confidence 97 3999999999999999999999999998751 13899999999999999999863 7899 99999999
Q ss_pred ccchhhhheeeeecc
Q 047978 302 EAGLTVEAIVLRSIP 316 (320)
Q Consensus 302 G~G~~~~a~~l~~~~ 316 (320)
|+|++|++++++|++
T Consensus 295 G~G~s~~~~~~~~~~ 309 (345)
T TIGR00748 295 GSGAGSDAFSIVVQD 309 (345)
T ss_pred cCCcceeEEEEEEch
Confidence 999999999999974
No 20
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=1.4e-43 Score=327.15 Aligned_cols=288 Identities=23% Similarity=0.288 Sum_probs=230.0
Q ss_pred ccceEEccccccCCCcccccccHHHHHhhhcCCch---hHHHHHHHHHhhhcccchHHHHHHHHHHHHHHcCCCCCCcCE
Q 047978 4 LGKFQETQRPQANPANCVYQTDYPDFYFRITSSNH---MTELKEKFKRMYILVPKVPKLGKEAVSKAIKEWGQPISKITH 80 (320)
Q Consensus 4 ~~~~~I~a~~~~lP~~~i~~~e~~~~~~~~~~~~~---~~gi~~~~r~~~~~~e~~~~la~~Aa~~aL~~ag~~~~dId~ 80 (320)
|.+++|.++++|+|+++++++|+.+.. ....++ .+|+.+ |+++.++++..+|+.+|++++|+++|+++++||.
T Consensus 1 ~~~v~I~ai~~~lP~~~~~~~~~~~~~--~~~~~~i~~~~gi~~--r~~~~~~~~~~~la~~A~~~al~~agl~~~~id~ 76 (319)
T PRK09352 1 MMYAKILGTGSYLPERVVTNDDLEKMV--DTSDEWIVTRTGIKE--RRIAAPDETTSDLATEAAKKALEAAGIDPEDIDL 76 (319)
T ss_pred CCceEEEEEEEECCCeEEcHHHHHHHc--CCCHHHhhhhcCeEE--EEeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCE
Confidence 457899999999999999999999886 222222 245655 6777789999999999999999999999999999
Q ss_pred EEEEeeCC-CCCCCHHHHHHHHcCCCcc-------hhhhhhh--------hhcCCCCeEEEEEeecccccccCCCCCCch
Q 047978 81 LISCSVSG-VDMPGADYQLTKLLGLKPS-------VKRVMLT--------AESNAGARVLVVCSEITVGTFRAPSDENLS 144 (320)
Q Consensus 81 li~~s~t~-~~~p~~a~~l~~~LGl~~~-------~c~~~l~--------l~~~~~~~~LVv~~e~~s~~~~~~~~~~~~ 144 (320)
||++++++ +..|+.+.+|++.||+.+. .|++.+. ++++..+++||+++|..++ ..++.+
T Consensus 77 vi~~~~~~~~~~~~~~~~i~~~lG~~~~~~~~v~~~Casg~~al~~A~~~i~~g~~~~vLvv~~e~~s~-~~~~~~---- 151 (319)
T PRK09352 77 IIVATTTPDYAFPSTACLVQARLGAKNAAAFDLSAACSGFVYALSTADQFIRSGAYKNVLVIGAEKLSR-IVDWTD---- 151 (319)
T ss_pred EEEEcCCCCCCCchHHHHHHHHhCCCCCcEeeccccchhHHHHHHHHHHHHHcCCCCEEEEEEehhhcc-ccCccc----
Confidence 99999988 6789999999999999653 2655433 7789999999999999886 444433
Q ss_pred hhhhhhhhccCceEEEEeecCCCCCCCCeeEEeccCce----ecCCCccccc---ccccccc-----eechhHHHHHHHH
Q 047978 145 CLVNRAIVGDGTAALIVGACPDINTERPLFHIVPTAQT----ILPDSEDAIK---GHFRESP-----LIADNIDKFLAES 212 (320)
Q Consensus 145 ~~~~~~~~GDgAaA~ll~~~~~~~~~~~~~~~~~~~~~----~~p~~~~~~~---~~~~~~g-----~~~~~~~~~i~~~ 212 (320)
.....+|||||+|+||++++..++. .+++.+.+.. ..|....... .++.+++ ...+.++++++++
T Consensus 152 -~~~~~~~gDGaaA~ll~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 228 (319)
T PRK09352 152 -RSTCVLFGDGAGAVVLGASEEPGIL--STHLGSDGSYGDLLYLPGGGSRGPASPGYLRMEGREVFKFAVRELAKVAREA 228 (319)
T ss_pred -CCceEEEeccceEEEEEEcCCCCeE--EEEEEEcCCCCCeEEeCCCCCCCCCCCCceEECCHHHHHHHHHHHHHHHHHH
Confidence 2246799999999999998753211 2333333321 2343321111 1233333 2345678899999
Q ss_pred hhhcCCCCCCCCceEEEEcCCChhHHHHHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCCCCC
Q 047978 213 FDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEE 292 (320)
Q Consensus 213 l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~ 292 (320)
|+++|++++|+ .+|++||+|+++++.+++.||+|++++.. ++++|||+++|+++++|++++++ |++++|
T Consensus 229 l~~~g~~~~di--~~~~~h~~~~~~~~~~~~~lg~~~~~~~~---~~~~~Gn~~~a~~~~~L~~~~~~----g~~~~G-- 297 (319)
T PRK09352 229 LEAAGLTPEDI--DWLVPHQANLRIIDATAKKLGLPMEKVVV---TVDKYGNTSAASIPLALDEAVRD----GRIKRG-- 297 (319)
T ss_pred HHHcCCCHHHC--CEEEECCCCHHHHHHHHHHhCCCHHHhhh---hHHhhCCHHHHHHHHHHHHHHHc----CCCCCC--
Confidence 99999999986 39999999999999999999999999865 59999999999999999999998 999999
Q ss_pred CceEEEEeeccchhhhheeeeec
Q 047978 293 LEWGVLLGFEAGLTVEAIVLRSI 315 (320)
Q Consensus 293 ~d~vll~~~G~G~~~~a~~l~~~ 315 (320)
|+++++++|+|++|+++++||+
T Consensus 298 -d~vll~s~G~G~~~~~~ll~~~ 319 (319)
T PRK09352 298 -DLVLLEGFGGGLTWGAALVRWP 319 (319)
T ss_pred -CEEEEEEEchhheeEEEEEEeC
Confidence 9999999999999999999985
No 21
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=100.00 E-value=1.6e-43 Score=326.66 Aligned_cols=285 Identities=21% Similarity=0.288 Sum_probs=227.9
Q ss_pred ceEEccccccCCCcccccccHHHHHhhhcCCch---hHHHHHHHHHhhhcccchHHHHHHHHHHHHHHcCCCCCCcCEEE
Q 047978 6 KFQETQRPQANPANCVYQTDYPDFYFRITSSNH---MTELKEKFKRMYILVPKVPKLGKEAVSKAIKEWGQPISKITHLI 82 (320)
Q Consensus 6 ~~~I~a~~~~lP~~~i~~~e~~~~~~~~~~~~~---~~gi~~~~r~~~~~~e~~~~la~~Aa~~aL~~ag~~~~dId~li 82 (320)
.++|.++++|+|+++++++|+.+.+ ..+..+ .+|+.+ |++..+++++.+|+.+|+++||+++|++++|||.||
T Consensus 2 ~~~I~~i~~~~P~~~~~~~~~~~~~--~~~~~~i~~~~gi~~--r~~~~~~~~~~~la~~A~~~al~~agl~~~~Id~~i 77 (318)
T TIGR00747 2 YAGILGTGSYLPEKVLTNADLEKMV--DTSDEWIVTRTGIKE--RRIAADDETSSTMGFEAAKRAIENAGISKDDIDLII 77 (318)
T ss_pred CCEEEEEEEECCCceecHHHHHHhc--CCchHHeecccCceE--EEECCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 3899999999999999999999886 222222 256666 788888999999999999999999999999999999
Q ss_pred EEeeCC-CCCCCHHHHHHHHcCCCcc-------hhhhhhh--------hhcCCCCeEEEEEeecccccccCCCCCCchhh
Q 047978 83 SCSVSG-VDMPGADYQLTKLLGLKPS-------VKRVMLT--------AESNAGARVLVVCSEITVGTFRAPSDENLSCL 146 (320)
Q Consensus 83 ~~s~t~-~~~p~~a~~l~~~LGl~~~-------~c~~~l~--------l~~~~~~~~LVv~~e~~s~~~~~~~~~~~~~~ 146 (320)
++++++ +..|+.+.+|++.||+++. .|++++. ++++..+++||+++|+.+. +.++.++
T Consensus 78 ~~~~~~~~~~~~~a~~l~~~lGl~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~~Lvv~~e~~~~-~~~~~~~----- 151 (318)
T TIGR00747 78 VATTTPDHAFPSAACMVQAYLGIKGIPAFDLSAACAGFIYALSVAKQYIESGKYKTVLVVGAEKLSS-TLDWTDR----- 151 (318)
T ss_pred EECCCCCCCCChHHHHHHHHhCCCCCcEeehhhhhHHHHHHHHHHHHHHHcCCCCEEEEEEehhhcC-cCCcCCC-----
Confidence 999998 7789999999999999863 2655433 6789999999999999886 4444432
Q ss_pred hhhhhhccCceEEEEeecCCCC-CCCCeeEEeccCc----eecCCCccc---ccccccccc-----eechhHHHHHHHHh
Q 047978 147 VNRAIVGDGTAALIVGACPDIN-TERPLFHIVPTAQ----TILPDSEDA---IKGHFRESP-----LIADNIDKFLAESF 213 (320)
Q Consensus 147 ~~~~~~GDgAaA~ll~~~~~~~-~~~~~~~~~~~~~----~~~p~~~~~---~~~~~~~~g-----~~~~~~~~~i~~~l 213 (320)
....+|||||+|+||++++... +. .+++.+.+. ..+|..... ...++...+ ...+.++++++++|
T Consensus 152 ~~~~~~GDGAaA~lL~~~~~~~~i~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 229 (318)
T TIGR00747 152 GTCVLFGDGAGAVVLGESEDPGGII--STHLGADGTQGEALYLPAGGRPTSGPSPFITMEGNEVFKHAVRKMGDVVEETL 229 (318)
T ss_pred CeEEEEecceeEEEEeecCCCCcEE--EEEEEEcCCCcceEEECCCCcCCCCCCCceEECCHHHHHHHHHHHHHHHHHHH
Confidence 2357899999999999987532 11 123333222 123432111 011122222 22355678899999
Q ss_pred hhcCCCCCCCCceEEEEcCCChhHHHHHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCCCCCC
Q 047978 214 DQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEEL 293 (320)
Q Consensus 214 ~~~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~ 293 (320)
+++|++++|+ .+|++||+++++++.+++.||+|++|+.. ++++|||+++||+|++|++++++ |++++|
T Consensus 230 ~~~g~~~~di--~~~~~h~~~~~~~~~~~~~lgi~~~k~~~---~~~~~Gn~~sas~~~~L~~~~~~----~~~~~G--- 297 (318)
T TIGR00747 230 EANGLDPEDI--DWFVPHQANLRIIEALAKRLELDMSQVVK---TVHKYGNTSAASIPLALDELLRT----GRIKPG--- 297 (318)
T ss_pred HHcCCCHHHC--CEEEECCCCHHHHHHHHHHcCCCHHHeee---hHhhhCCHHHHHHHHHHHHHHHc----CCCCCC---
Confidence 9999999986 39999999999999999999999999986 59999999999999999999998 999999
Q ss_pred ceEEEEeeccchhhhheeeee
Q 047978 294 EWGVLLGFEAGLTVEAIVLRS 314 (320)
Q Consensus 294 d~vll~~~G~G~~~~a~~l~~ 314 (320)
|+++++++|+|++|+++++||
T Consensus 298 d~vll~~~G~G~t~~~~~l~~ 318 (318)
T TIGR00747 298 DLLLLVAFGGGLTWGAALVRF 318 (318)
T ss_pred CEEEEEEEehhheeeEEEEEC
Confidence 999999999999999999997
No 22
>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=7.7e-42 Score=297.85 Aligned_cols=297 Identities=26% Similarity=0.418 Sum_probs=241.6
Q ss_pred eEEccccccCCCcccccccHHHHHhhhcCCc---hhH-------HHHHHHHHhh-----------------hcccchHHH
Q 047978 7 FQETQRPQANPANCVYQTDYPDFYFRITSSN---HMT-------ELKEKFKRMY-----------------ILVPKVPKL 59 (320)
Q Consensus 7 ~~I~a~~~~lP~~~i~~~e~~~~~~~~~~~~---~~~-------gi~~~~r~~~-----------------~~~e~~~~l 59 (320)
..|.++++++|+.++.+.|+.+.+......+ .+. .|.+ |+.. .+-|.+.++
T Consensus 2 a~i~sv~t~~Ppy~~~Qse~~d~f~~~~~~~~~~~I~r~l~~~~~i~~--R~~v~Pl~~y~e~~~f~ekN~ifie~a~~l 79 (356)
T COG3424 2 AVIASVATALPPYRYNQSEITDSFAELPFQEGREDIPRVLHANAQINR--RHLVLPLDWYREPHGFGEKNEIFIEEAVPL 79 (356)
T ss_pred ceeeecccCCCccccchHHHHHHHHHhccccchHHHHHHHhhcccccc--ceecccHhhccCCCChhhhhhhHHHHHHHH
Confidence 3689999999999999988887763221111 111 1221 2111 234568899
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcch---------hhhhhh--------hhcCCCCe
Q 047978 60 GKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPSV---------KRVMLT--------AESNAGAR 122 (320)
Q Consensus 60 a~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~~---------c~~~l~--------l~~~~~~~ 122 (320)
.++|.++||+.+++.|+|||+|+++|+|+...|+..++|.++||+++.+ |.+-.. +++.+..+
T Consensus 80 ~v~a~r~aL~~~~l~pedId~vv~vtsTG~~~Ps~dari~~~Lgl~p~~~Rvpv~glGCaaga~glara~~y~ra~P~~~ 159 (356)
T COG3424 80 GVDALRRALDGSPLRPEDIDAVVTVTSTGLATPSLDARIVGELGLSPDTRRVPVWGLGCAAGAAGLARARDYCRAAPDAN 159 (356)
T ss_pred HHHHHHHHhccCCCCHHHCcEEEEEeeccccCCChhHHHHhhcCCCCccceeeeecchhhhhhhHHHHHHHHHhhCccce
Confidence 9999999999999999999999999999999999999999999999975 543211 78899999
Q ss_pred EEEEEeecccccccCCCCCCchhhhhhhhhccCceEEEEeecCCC-CCCCCeeEEeccCceecCCCcccccccccccc--
Q 047978 123 VLVVCSEITVGTFRAPSDENLSCLVNRAIVGDGTAALIVGACPDI-NTERPLFHIVPTAQTILPDSEDAIKGHFRESP-- 199 (320)
Q Consensus 123 ~LVv~~e~~s~~~~~~~~~~~~~~~~~~~~GDgAaA~ll~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g-- 199 (320)
|||||.|.||-++. ..|+...+.+...+||||++|+|++.+... +...-...+....+...|++++.|.|.+..+|
T Consensus 160 vlvV~vELCSLt~~-~~d~t~s~lVgtaLF~DG~AA~vv~gd~~~~~~~~~~p~i~~s~StL~~dse~~Mgwdv~d~G~~ 238 (356)
T COG3424 160 VLVVCVELCSLTYV-FADDTKSNLVGTALFGDGAAAVVVSGDRRAEGKRPLRPDILDSFSTLYPDSEDIMGWDVGDQGLK 238 (356)
T ss_pred EEEEEeeeeeeeee-cCCCCcccceeeeeecCCeeEEEEeccccccccCCCCceecccccccCCccccccceeecCCcEE
Confidence 99999999997665 345555678888999999999999986553 33322345677777888999999999999999
Q ss_pred -eechhHHHHH--------HHHhhhcCCCCCCCCceEEEEcCCChhHHHHHHHHcCCCcchhhhhHHHHhccCCcccchH
Q 047978 200 -LIADNIDKFL--------AESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKTKLRETRHVLSEYGNMASATV 270 (320)
Q Consensus 200 -~~~~~~~~~i--------~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi 270 (320)
...+.+|..| ..+|..++++.+|| ..|+.|++++++++...+.||+++|++..+|+.+++||||+||++
T Consensus 239 ~vlSrdlp~lIe~~l~~~V~~fL~~~~ls~~dI--~~w~~HPGG~KVida~~~sLgls~e~l~~s~~~L~~~GNMSSatv 316 (356)
T COG3424 239 VVLSRDLPNLIESYLAPNVTTFLATHGLSIEDI--EAWVVHPGGPKVIDAYEESLGLSPEALELSWDVLREYGNMSSATV 316 (356)
T ss_pred EEEcCchhHHHHHHhhhhHHHHHHHcCCchhhh--ceeeeCCCCchHHHHHHHhcCCCHHHHHHHHHHHHHhCCccchhh
Confidence 3345555444 46677889999995 399999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhchhcCCCCCCCCCceEEEEeeccchhhhheeeeecc
Q 047978 271 LFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEAIVLRSIP 316 (320)
Q Consensus 271 ~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~~l~~~~ 316 (320)
++.|.+.+++ . -++| ++.++.++|+|++.+.++++|..
T Consensus 317 LfVL~d~l~~----~-~~~g---~~Gl~~A~GPGf~sElvL~~w~~ 354 (356)
T COG3424 317 LFVLEDTLQK----A-PKSG---SRGLMFAMGPGFCSELVLLDWEG 354 (356)
T ss_pred HHHHHHHHHh----c-CCCC---cceeeeecCCcceeeeeeEEeec
Confidence 9999999997 4 6778 99999999999999999999964
No 23
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=2e-42 Score=326.11 Aligned_cols=292 Identities=18% Similarity=0.198 Sum_probs=221.8
Q ss_pred ceEEccccccCCCcccccccHHHHHhhhcC-----Cch---hHHHHHHHHHhhhc-----ccchHHHHHHHHHHHHHHcC
Q 047978 6 KFQETQRPQANPANCVYQTDYPDFYFRITS-----SNH---MTELKEKFKRMYIL-----VPKVPKLGKEAVSKAIKEWG 72 (320)
Q Consensus 6 ~~~I~a~~~~lP~~~i~~~e~~~~~~~~~~-----~~~---~~gi~~~~r~~~~~-----~e~~~~la~~Aa~~aL~~ag 72 (320)
+++|.++|+|+|+++++|+|+.+.+..... .+| .+||.+ ||++.+ +++..+|+.+|+++||+++|
T Consensus 2 ~v~I~gig~~lP~~~v~n~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~--R~~~~~~~~~~~~~~~~La~~A~~~aL~~ag 79 (378)
T PRK06816 2 NVYITSTGAFLPGEPVSNDEMEAYLGLINGKPSRARRIILRNNGIKT--RHYALDPEGRPTHSNAQMAAEAIRDLLDDAG 79 (378)
T ss_pred CeEEEeeeecCCCCccCHHHHHHHHhhccCCcHHHHHHHHHhCCCce--EEEEECCCCCCCCCHHHHHHHHHHHHHHHcC
Confidence 479999999999999999999887632111 122 246776 777643 25789999999999999999
Q ss_pred CCCCCcCEEEEEeeCC-CCCCCHHHHHHHHcCCCcc-------hhhhhhh--------hhcCCCCeEEEEEeeccccccc
Q 047978 73 QPISKITHLISCSVSG-VDMPGADYQLTKLLGLKPS-------VKRVMLT--------AESNAGARVLVVCSEITVGTFR 136 (320)
Q Consensus 73 ~~~~dId~li~~s~t~-~~~p~~a~~l~~~LGl~~~-------~c~~~l~--------l~~~~~~~~LVv~~e~~s~~~~ 136 (320)
++++|||+||++|+++ +..|+.+..|+++||+++. .|+++++ ++++..+++|||++|..|. ..
T Consensus 80 i~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~~~~~~~v~~~Cas~~~al~~A~~~i~sg~~~~vLvv~~E~~s~-~~ 158 (378)
T PRK06816 80 FSLGDIELLACGTSQPDQLMPGHASMVHGELGAPPIEVVSSAGVCAAGMMALKYAYLSVKAGESRNAVATASELASR-WF 158 (378)
T ss_pred CCHHHCCEEEEEECCCCcCChHHHHHHHhhCCCCCCceeeecCcCHHHHHHHHHHHHHHHCCCCCEEEEEeEccchh-hh
Confidence 9999999999999998 7889999999999999764 2777654 6788999999999999986 33
Q ss_pred CCCCCC----------------chhhhhhhhhccCceEEEEeecCCC-CCCCCeeEE--e---ccCce---e-------c
Q 047978 137 APSDEN----------------LSCLVNRAIVGDGTAALIVGACPDI-NTERPLFHI--V---PTAQT---I-------L 184 (320)
Q Consensus 137 ~~~~~~----------------~~~~~~~~~~GDgAaA~ll~~~~~~-~~~~~~~~~--~---~~~~~---~-------~ 184 (320)
++.+.+ .+.....++|||||+|+||++.+.. ++ .+.+ . +.+.. . .
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fGDGA~A~vl~~~~~~~g~---~l~~~~~~~~~~~~~~~~~~~~g~~~~ 235 (378)
T PRK06816 159 RASRFEAEEEKLAELEENPEIAFEKDFLRWMLSDGAGAVLLENKPRPDGL---SLRIDWIDLRSYAGELPVCMYAGAEKN 235 (378)
T ss_pred hhhhhhhHHHHhhcCcccCCCCCCCCCCCEeeecccEEEEEEecCCCCCc---eEEEEEEeeecccccCccceecCCccC
Confidence 332110 0111124579999999999987652 21 1111 1 11100 0 1
Q ss_pred CCC---------cc-c---ccccccccc-----eechhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHHHHHHc-
Q 047978 185 PDS---------ED-A---IKGHFRESP-----LIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKL- 245 (320)
Q Consensus 185 p~~---------~~-~---~~~~~~~~g-----~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~~~l- 245 (320)
|.. .+ . ....+++++ .+...+++.++++|+++|++++|| ++|++||+|.++++.+.++|
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~DI--d~~v~Hq~n~~~~~~v~~~l~ 313 (378)
T PRK06816 236 EDGSLKGWSDYPPEEAEAASALSLKQDVRLLNENIVVYTIKPLLELVDKRNLDPDDI--DYFLPHYSSEYFREKIVELLA 313 (378)
T ss_pred CCCCccCcccCCHHHHHhccCchHHhHHHHHHHHhHHHHHHHHHHHHHHcCCChhhC--CEEeeCcccHHHHHHHHHHHH
Confidence 100 00 0 001233334 334556899999999999999997 49999999999999999987
Q ss_pred ----CCCcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCCCCCCceEEEEeeccc-hhhhheeeeec
Q 047978 246 ----GLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAG-LTVEAIVLRSI 315 (320)
Q Consensus 246 ----g~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G-~~~~a~~l~~~ 315 (320)
|+|++|++. ++++||||++||+|++|++++++ |++++| |+|++++.|+| +++++++++|.
T Consensus 314 ~~~~gl~~~k~~~---~~~~~GNt~sAsipi~L~~a~~~----g~~~~G---d~vl~~~~~s~~~~~~~~~~~~~ 378 (378)
T PRK06816 314 KAGFMIPEEKWFT---NLATVGNTGSASIYIMLDELLNS----GRLKPG---QKILCFVPESGRFSTAFMLLTVV 378 (378)
T ss_pred hccCCCChhheEE---eccccccccchHHHHHHHHHHHc----CCCCCC---CEEEEEEecccchhheeEEEEEC
Confidence 899999987 59999999999999999999998 999999 99999987766 99999999984
No 24
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=6.6e-41 Score=315.51 Aligned_cols=287 Identities=19% Similarity=0.247 Sum_probs=215.7
Q ss_pred cceEEccccccCCCcccccccHHHHHhhh----------------------cCCch---hHHHHHHHHHhhhc-------
Q 047978 5 GKFQETQRPQANPANCVYQTDYPDFYFRI----------------------TSSNH---MTELKEKFKRMYIL------- 52 (320)
Q Consensus 5 ~~~~I~a~~~~lP~~~i~~~e~~~~~~~~----------------------~~~~~---~~gi~~~~r~~~~~------- 52 (320)
++++|.++|+|+|+++++|+|+++.+..- ...++ .+||.+ ||++..
T Consensus 1 ~~~~I~~~g~~lP~~~v~n~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~--R~~~~~~~~~~~~ 78 (372)
T PRK07515 1 HNVVISGTGLYTPPESISNEELVASFNAYVERFNAENAAAIAAGEVEALQPSSSEFIEKASGIKS--RYVMDKEGILDPD 78 (372)
T ss_pred CCcEEEEEEeecCCccccHHHHHHHHhhhhhhhcccchhhhccccccccCCCCHHHhhhccCCce--EEEecccccCccc
Confidence 36899999999999999999998874100 01223 246665 666532
Q ss_pred -----------cc--chHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCC-CCCCCHHHHHHHHcCCCcc------hhhhh
Q 047978 53 -----------VP--KVPKLGKEAVSKAIKEWGQPISKITHLISCSVSG-VDMPGADYQLTKLLGLKPS------VKRVM 112 (320)
Q Consensus 53 -----------~e--~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~-~~~p~~a~~l~~~LGl~~~------~c~~~ 112 (320)
.+ +..+|+.+|+++||+++|++++|||.||++++++ +..|+.+..|++.||++.. .|+++
T Consensus 79 ~~~~~~~~r~~~~~~~~~~la~~Aa~~aL~~agl~~~~Id~li~~~~~~~~~~p~~a~~v~~~Lgl~~~~~~v~~aCasg 158 (372)
T PRK07515 79 RMRPRIPERSNDELSIQAEMGVAAARQALARAGRTAEDIDAVIVACSNMQRAYPAMAIEIQQALGIEGFAFDMNVACSSA 158 (372)
T ss_pred ccCcccccccccchhhHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhcCCCCcEEEecchhHHH
Confidence 11 3468999999999999999999999999999888 7899999999999999642 37665
Q ss_pred hh--------hhcCCCCeEEEEEeecccccccCCCCCCchhhhhhhhhccCceEEEEeecCCCCCCCCeeEEe-----cc
Q 047978 113 LT--------AESNAGARVLVVCSEITVGTFRAPSDENLSCLVNRAIVGDGTAALIVGACPDINTERPLFHIV-----PT 179 (320)
Q Consensus 113 l~--------l~~~~~~~~LVv~~e~~s~~~~~~~~~~~~~~~~~~~~GDgAaA~ll~~~~~~~~~~~~~~~~-----~~ 179 (320)
++ ++++..+++|||++|..+. +.++.+ +.+.++|||||+|+||++++... .++.+++. +.
T Consensus 159 ~~al~~A~~~i~~g~~~~vLvv~~e~~s~-~~~~~d-----~~~~~lfGDgAaA~vL~~~~~~~-~~~~~~il~~~~~~~ 231 (372)
T PRK07515 159 TFGIQTAANAIRSGSARRVLVVNPEICSG-HLNFRD-----RDSHFIFGDVATAVIVERADTAT-SAGGFEILGTRLFTQ 231 (372)
T ss_pred HHHHHHHHHHHHcCCCCEEEEEeeecccc-cccccC-----CCCCEEecCccEEEEEeeccccc-cCCCceEEEEEeecc
Confidence 44 6789999999999999986 445544 22468999999999999865421 00111111 11
Q ss_pred Ccee-----------cCCCcccccccccccc-----eechhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHHHHH
Q 047978 180 AQTI-----------LPDSEDAIKGHFRESP-----LIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEG 243 (320)
Q Consensus 180 ~~~~-----------~p~~~~~~~~~~~~~g-----~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~~ 243 (320)
.... .+.........+.++| .+.+.++++++++|+++|++++|| ++|++||+|.++++.+.+
T Consensus 232 ~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~dI--d~~~~Hq~~~~~~d~~~~ 309 (372)
T PRK07515 232 FSNNIRNNFGFLNRADPEGIGARDKLFVQEGRKVFKEVCPMVAEHIVEHLAENGLTPADV--KRFWLHQANINMNQLIGK 309 (372)
T ss_pred cccceecCCCCCCCCCccccccccceEEeccHHHHHHHHHHHHHHHHHHHHHcCCCHHHC--CEEEECCCCHHHHHHHHH
Confidence 1100 1111111122355566 245568899999999999999997 499999999999999998
Q ss_pred H-cC--CCcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCCCCCCceEEEEeeccchhhhheeeee
Q 047978 244 K-LG--LEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEAIVLRS 314 (320)
Q Consensus 244 ~-lg--~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~~l~~ 314 (320)
. || +++++... ++++||||+|||+|++|+++. +++++| |++++++||+|++|++++||.
T Consensus 310 ~llg~~~~~~~~~~---~~~~~GNt~sasi~~~L~~~~------~~~~~G---d~vll~~~G~G~~~~~~ll~~ 371 (372)
T PRK07515 310 KVLGRDATPEEAPV---ILDEYANTSSAGSIIAFHKHS------DDLAAG---DLGVICSFGAGYSIGSVIVRK 371 (372)
T ss_pred HhccCCCChhhceE---eHHhcCCchhhHHHHHHHHHh------ccCCCC---CEEEEEEecccHHHHHHHhcc
Confidence 8 55 45566665 599999999999999999874 458899 999999999999999999985
No 25
>PLN02932 3-ketoacyl-CoA synthase
Probab=100.00 E-value=7.4e-40 Score=311.39 Aligned_cols=298 Identities=16% Similarity=0.182 Sum_probs=211.3
Q ss_pred cceEEccccccCCCc--ccccccHHHHHhhh-----c---C---Cch------hHHHHHHHHHhhhc-------------
Q 047978 5 GKFQETQRPQANPAN--CVYQTDYPDFYFRI-----T---S---SNH------MTELKEKFKRMYIL------------- 52 (320)
Q Consensus 5 ~~~~I~a~~~~lP~~--~i~~~e~~~~~~~~-----~---~---~~~------~~gi~~~~r~~~~~------------- 52 (320)
+.|++.-.+.|-|+. +++.+.+.+..... . + -++ .+||++ |++.++
T Consensus 66 ~~vyl~d~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~i~~rsGig~--~t~~p~~~~~~~~~~~~~~ 143 (478)
T PLN02932 66 KPVYLVDFSCYLPPSHLKASIQTIMGHVRRVREAGAWKQESDYLMDFCEKILERSGLGQ--ETYIPEGLQCLPLQQNLAV 143 (478)
T ss_pred CcEEEEeeeeecCcccccccHHHHHHHHHhhcccCCCCccchhHHHHHHHHHHHcCCCC--ceeeccccccCCHHHHHHH
Confidence 359999999999987 47777777654111 1 1 112 145555 444432
Q ss_pred -ccchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcc---------hhhhhhh--------
Q 047978 53 -VPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPS---------VKRVMLT-------- 114 (320)
Q Consensus 53 -~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~---------~c~~~l~-------- 114 (320)
.+...+|+.+|+++||+++|++|+|||+||++|++++..|+.+.+|+++||++++ .|+++++
T Consensus 144 ~~~ea~~la~~Aa~~aL~~agi~p~dId~lIv~tst~~~~Pslaa~V~~~lGlr~~i~~fdL~gmGCSggl~aL~lA~~l 223 (478)
T PLN02932 144 SRKETEEVIIGAVDNLFRNTGISPSDIGILVVNSSTFNPTPSLSSILVNKFKLRDNIKSLNLGGMGCSAGVIAIDAAKSL 223 (478)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCCCCcHHHHHHHHhCCCCCceEEEeccchhhhHHHHHHHHHHH
Confidence 2357899999999999999999999999999999999999999999999999854 3888766
Q ss_pred hhcCCCCeEEEEEeecccccccCCCCCCchhhhhhhhhccCceEEEEeecCCCCCCCCeeEEeccCce------------
Q 047978 115 AESNAGARVLVVCSEITVGTFRAPSDENLSCLVNRAIVGDGTAALIVGACPDINTERPLFHIVPTAQT------------ 182 (320)
Q Consensus 115 l~~~~~~~~LVv~~e~~s~~~~~~~~~~~~~~~~~~~~GDgAaA~ll~~~~~~~~~~~~~~~~~~~~~------------ 182 (320)
+++++.++||||++|.+|.++ ++.+ .++.+.+.++|||||+|+||++++... ..+.+++......
T Consensus 224 l~~~~~~~aLVVstE~~S~~~-~~~d-~r~~l~t~~LFgDGAAAvlLs~~~~~~-~~~~~~L~~~v~t~~~ad~~~~~~v 300 (478)
T PLN02932 224 LQVHRNTYALVVSTENITQNL-YLGN-NKSMLVTNCLFRIGGAAILLSNRSRDR-KRAKYELVHTVRVHTGADDRSYECA 300 (478)
T ss_pred HHcCCCCeEEEEEEeeccccc-CCCc-chhhhccceeecccceEEEEecccccc-cCcceEEEeeeeeeeccCCCccccc
Confidence 678899999999999999855 4543 234457889999999999999865311 1123344311110
Q ss_pred ecCCCcc-cccc----------------cccccc-eec---hhH----HHHHHHHhhh--cCCCC---CCCCceEEEEcC
Q 047978 183 ILPDSED-AIKG----------------HFRESP-LIA---DNI----DKFLAESFDQ--VSLND---HDWNSLFWMMHP 232 (320)
Q Consensus 183 ~~p~~~~-~~~~----------------~~~~~g-~~~---~~~----~~~i~~~l~~--~g~~~---~d~~~~~~i~h~ 232 (320)
..+..++ .... .+...| ... +.+ ...-+++++. .++.+ +++ .+|++||
T Consensus 301 ~~~~d~~G~~g~~Lsk~lp~~~~~al~~ni~~~~p~v~p~~e~~~~~~~~~~~~~~k~~~~~~~~~~~~~i--d~f~iHq 378 (478)
T PLN02932 301 TQEEDEDGIVGVSLSKNLPMVAARTLKINIATLGPLVLPLSEKFHFFVRFVKKKFFNPKLKHYIPDFKLAF--EHFCIHA 378 (478)
T ss_pred eeecccCCcceeeECccchHHHHHHHhhhhhccccccccchhhhHHHHHHhHHHHHHHHhhcCcHhHHhhh--ceEEEcc
Confidence 1111100 0000 011111 000 000 0001122221 12322 343 2999999
Q ss_pred CChhHHHHHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCCCCCCceEEEEeeccchhhhheee
Q 047978 233 IGPAVLDQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEAIVL 312 (320)
Q Consensus 233 ~~~~~~~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~~l 312 (320)
+|+++++.+++.||++++++..++.++++||||+|+|+|+.|+++.++ |++++| |+|++++||+|++|++++|
T Consensus 379 ggr~IIdav~k~LgL~~~~~e~s~~tL~rfGNTSSaSI~~~L~~~ea~----grik~G---d~vl~iaFGsGf~~~s~vw 451 (478)
T PLN02932 379 GGRALIDEMEKNLHLTPLDVEASRMTLHRFGNTSSSSIWYELAYTEAK----GRMKKG---DRIWQIALGSGFKCNSSVW 451 (478)
T ss_pred CCHHHHHHHHHHcCCChHHHHHHHHHHHHhCChhhhHHHHHHHHHHHc----CCCCCC---CEEEEEEEeccHHHHHHHH
Confidence 999999999999999998887777789999999999999999999987 999999 9999999999999999999
Q ss_pred eecc
Q 047978 313 RSIP 316 (320)
Q Consensus 313 ~~~~ 316 (320)
|...
T Consensus 452 ~~~~ 455 (478)
T PLN02932 452 VALR 455 (478)
T ss_pred HHhc
Confidence 8753
No 26
>PLN02377 3-ketoacyl-CoA synthase
Probab=100.00 E-value=7.5e-39 Score=306.17 Aligned_cols=300 Identities=14% Similarity=0.167 Sum_probs=212.4
Q ss_pred cceEEccccccCCCc--ccccccHHHHHhhh--cCCc---hh------HHHHHHH------------HHhhhcccchHHH
Q 047978 5 GKFQETQRPQANPAN--CVYQTDYPDFYFRI--TSSN---HM------TELKEKF------------KRMYILVPKVPKL 59 (320)
Q Consensus 5 ~~~~I~a~~~~lP~~--~i~~~e~~~~~~~~--~~~~---~~------~gi~~~~------------r~~~~~~e~~~~l 59 (320)
+.|++.-.+.|.|+. +++.+.+.+..... .+.+ +. .||+++. .++....+.+.++
T Consensus 96 ~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ri~~~sgig~~t~~p~~~~~~~~~~~~~~~~~ea~~l 175 (502)
T PLN02377 96 RPVYLVDYSCYRAPDHLKAPFARFMEHSRLTGDFDDSSLEFQRKILERSGLGEDTYVPEAMHYIPPRPSMAAAREEAEQV 175 (502)
T ss_pred CCEEEEeeeeecCCccccccHHHHHHHHHHhCCCCHHHHHHHHHHHHhcCCCCccccCchhccCCccchHHHHHHHHHHH
Confidence 359999999999987 47888787765211 1222 12 2333200 1122234668899
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEeeCC-CCCCCHHHHHHHHcCCCcc---------hhhhhhh--------hhcCCCC
Q 047978 60 GKEAVSKAIKEWGQPISKITHLISCSVSG-VDMPGADYQLTKLLGLKPS---------VKRVMLT--------AESNAGA 121 (320)
Q Consensus 60 a~~Aa~~aL~~ag~~~~dId~li~~s~t~-~~~p~~a~~l~~~LGl~~~---------~c~~~l~--------l~~~~~~ 121 (320)
+.+|+++||+++|++|+|||+||+ |||+ +..|+.+.+|+++||++++ .|+++++ +++++.+
T Consensus 176 ~~~A~~~aL~kaGi~p~dID~LVv-~cS~~~~~PSlaa~V~~~LGlr~~v~afdL~gmGCsggl~aL~lA~~ll~~~~~~ 254 (502)
T PLN02377 176 MFGALDNLFANTNVNPKDIGILVV-NCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAVDLAKDMLQVHRNT 254 (502)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEE-ECCCCCCCCcHHHHHHHHhCCCCCCeEEecccchhhHHHHHHHHHHHHHHcCCCC
Confidence 999999999999999999999987 8998 7999999999999999853 3888766 6789999
Q ss_pred eEEEEEeecccccccCCCCCCchhhhhhhhhccCceEEEEeecCCCCC-CC-CeeEEecc-----Cce----ecCCC---
Q 047978 122 RVLVVCSEITVGTFRAPSDENLSCLVNRAIVGDGTAALIVGACPDINT-ER-PLFHIVPT-----AQT----ILPDS--- 187 (320)
Q Consensus 122 ~~LVv~~e~~s~~~~~~~~~~~~~~~~~~~~GDgAaA~ll~~~~~~~~-~~-~~~~~~~~-----~~~----~~p~~--- 187 (320)
+||||++|..|.++ ++.|+ +...+..++|||||+|+||++++.... .+ ..++++.. +.. ..+..
T Consensus 255 ~aLVVstE~~S~~~-~~~d~-~s~lv~n~LFgDGAaAvlLs~~~~~~~~a~~~l~~iv~t~~~~d~~~~~~i~~~~d~~G 332 (502)
T PLN02377 255 YAVVVSTENITQNW-YFGNK-KSMLIPNCLFRVGGSAVLLSNKSRDKRRSKYKLVHVVRTHRGADDKAFRCVYQEQDDAG 332 (502)
T ss_pred EEEEEEEecccccc-CCCCC-ccccccceeeccccEEEEEecccccccccccccceEEEEEEEEcCCccceeeeccccCC
Confidence 99999999999755 45542 223345799999999999998532210 00 11122211 110 11210
Q ss_pred -------ccc--c-----cccccccc------------eechhHHHHHHHHhhhcC-CCCCCCCceEEEEcCCChhHHHH
Q 047978 188 -------EDA--I-----KGHFRESP------------LIADNIDKFLAESFDQVS-LNDHDWNSLFWMMHPIGPAVLDQ 240 (320)
Q Consensus 188 -------~~~--~-----~~~~~~~g------------~~~~~~~~~i~~~l~~~g-~~~~d~~~~~~i~h~~~~~~~~~ 240 (320)
.+. + ...+++.| +....+++.+++.++..+ ...+|+ .+|++||+|+++++.
T Consensus 333 ~~g~~ls~dl~~v~g~~l~~~i~~lg~~vl~~se~~~~~a~~~~~~~~~~~l~~~~p~~~~di--dhf~iHqggr~IId~ 410 (502)
T PLN02377 333 KTGVSLSKDLMAIAGEALKTNITTLGPLVLPISEQLLFFATLVVKKLFNKKMKPYIPDFKLAF--DHFCIHAGGRAVIDE 410 (502)
T ss_pred CCCCCCCcchhhHhhHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhhccCCcHhhc--CEEEECCCCHHHHHH
Confidence 000 0 00122223 112233445555555543 234554 399999999999999
Q ss_pred HHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCCCCCCceEEEEeeccchhhhheeeeecc
Q 047978 241 IEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEAIVLRSIP 316 (320)
Q Consensus 241 ~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~~l~~~~ 316 (320)
+++.||++++++..++.++++||||+|+|+|+.|++++++ |++++| |++++++||+|++|++++||+..
T Consensus 411 v~k~LgL~~~~~e~sr~tL~r~GNTSSaSI~~aL~~~~~~----grik~G---d~VlliaFGsGf~~~s~v~~~~~ 479 (502)
T PLN02377 411 LEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAK----GRMRKG---NRVWQIAFGSGFKCNSAVWEALR 479 (502)
T ss_pred HHHHcCCCcccchHHHHHHHhcCCchhhHHHHHHHHHHHc----CCCCCC---CeEEEEEEccccEeeeEEEEEec
Confidence 9999999986666666789999999999999999999988 999999 99999999999999999999964
No 27
>PLN02854 3-ketoacyl-CoA synthase
Probab=100.00 E-value=2.8e-38 Score=302.25 Aligned_cols=299 Identities=15% Similarity=0.174 Sum_probs=214.2
Q ss_pred ceEEccccccCCCc--ccccccHHHHHhhh--cCCc---hh------HHHHHHH------------HHhhhcccchHHHH
Q 047978 6 KFQETQRPQANPAN--CVYQTDYPDFYFRI--TSSN---HM------TELKEKF------------KRMYILVPKVPKLG 60 (320)
Q Consensus 6 ~~~I~a~~~~lP~~--~i~~~e~~~~~~~~--~~~~---~~------~gi~~~~------------r~~~~~~e~~~~la 60 (320)
.|++.-.+.|-|+. +++.+.+.+..... .+.+ +. .|++++. ..+....+......
T Consensus 113 ~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sg~g~~ty~P~~~~~~~~~~~~~~~r~ea~~v~ 192 (521)
T PLN02854 113 PVYLVDFACYKPEDERKISVDSFLTMTEENGSFEDETVQFQRRISTRSGLGDETYLPRGITSRPPNLCMEEARAEAEAVM 192 (521)
T ss_pred cEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHhcCCCCccccCccccCCCCcchHHHHHHHHHHHH
Confidence 59999999999987 47788777765211 1222 22 2333310 01111223456668
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEEeeCC-CCCCCHHHHHHHHcCCCcc---------hhhhhhh--------hhcCCCCe
Q 047978 61 KEAVSKAIKEWGQPISKITHLISCSVSG-VDMPGADYQLTKLLGLKPS---------VKRVMLT--------AESNAGAR 122 (320)
Q Consensus 61 ~~Aa~~aL~~ag~~~~dId~li~~s~t~-~~~p~~a~~l~~~LGl~~~---------~c~~~l~--------l~~~~~~~ 122 (320)
..|++++|+++|++|+|||+||+ +||+ +..|+++++|+++||++++ .|+++++ +++++.++
T Consensus 193 ~~~~~~lL~kaGi~p~dID~LIv-~cS~~~p~PSlAa~I~n~LGlr~~i~afdLsgmGCSggl~aL~lA~~lL~~~~~~~ 271 (521)
T PLN02854 193 FGALDSLFSKTGVKPRDIGILIV-NCSLFNPTPSLSAMIVNHYKLRTDIKSYNLGGMGCSAGLISIDLANDLLKANPNSY 271 (521)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEE-ECCCCCCCCCHHHHHHHHhCCCCCceEEecccchhhhHHHHHHHHHHHHHhCCCCe
Confidence 88999999999999999999997 5778 7899999999999999843 3888876 67889999
Q ss_pred EEEEEeecccccccCCCCCCchhhhhhhhhccCceEEEEeecCCCCCCCCeeEE--------eccCc----eecCCC---
Q 047978 123 VLVVCSEITVGTFRAPSDENLSCLVNRAIVGDGTAALIVGACPDINTERPLFHI--------VPTAQ----TILPDS--- 187 (320)
Q Consensus 123 ~LVv~~e~~s~~~~~~~~~~~~~~~~~~~~GDgAaA~ll~~~~~~~~~~~~~~~--------~~~~~----~~~p~~--- 187 (320)
||||++|.+|.++...+| +...+..++|||||+|+||++++... ..+.+++ .+++. ...+.+
T Consensus 272 aLVVstE~~S~~~y~g~D--rs~lv~~~LFgDGAAAvlLs~~~~~~-~~~k~~L~~~v~t~~~ad~~~~~~i~~~~d~~G 348 (521)
T PLN02854 272 AVVVSTENITLNWYFGND--RSMLLCNCIFRMGGAAVLLSNKARDR-KRSKYQLVHTVRTHKGADDKNYNCVYQREDDKG 348 (521)
T ss_pred EEEEEEeeeecCCCCCCc--hhhhcceeeeccceeEEEEecccccc-cccchheeeEEEEEEeeCCCccCeEEeccCCCC
Confidence 999999999865532233 33345579999999999999864221 1111111 11111 011211
Q ss_pred -------ccc-------ccccccccc-----ee--chhHHHHHHHHhhhcCCCC------CCCCceEEEEcCCChhHHHH
Q 047978 188 -------EDA-------IKGHFRESP-----LI--ADNIDKFLAESFDQVSLND------HDWNSLFWMMHPIGPAVLDQ 240 (320)
Q Consensus 188 -------~~~-------~~~~~~~~g-----~~--~~~~~~~i~~~l~~~g~~~------~d~~~~~~i~h~~~~~~~~~ 240 (320)
.+. ....+++.| +. .+.+...+++.|.++|+++ +|+ .+|++||+|+++++.
T Consensus 349 ~~g~~lsk~l~~va~~~l~~~i~~~g~~Vl~~se~~~f~~~~i~~~L~~~gl~~~~pd~~~di--dhf~iHqggr~IId~ 426 (521)
T PLN02854 349 TIGVSLARELMAVAGDALKTNITTLGPLVLPLSEQFMFFVTLVRRKLLKAKVKPYIPDFKLAF--EHFCIHAGGRAVLDE 426 (521)
T ss_pred cccccccccccchhhhhhhhhhhhccccccchHHHHHHHHHHHHHHHHHcCCCccCCcccccC--cEEEECCCCHHHHHH
Confidence 000 011233444 11 1224677888899999986 354 399999999999999
Q ss_pred HHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCCCCCCceEEEEeeccchhhhheeeeeccC
Q 047978 241 IEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEAIVLRSIPM 317 (320)
Q Consensus 241 ~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~~l~~~~~ 317 (320)
+++.||+++++...++.++++||||+|+|+|+.|+++.++ |++++| |+|++++||+|++|++++|||..-
T Consensus 427 v~k~LgL~~~~~e~sr~tL~rfGNTSSASI~~~L~~~~~k----Grik~G---D~Vl~iaFGsGft~~sav~~~~~~ 496 (521)
T PLN02854 427 LQKNLQLSDWHMEPSRMTLHRFGNTSSSSLWYELAYTEAK----GRVSAG---DRVWQIAFGSGFKCNSAVWKALRE 496 (521)
T ss_pred HHHHcCCCcccccchHHHhhhcCChHhhHHHHHHHHHHHc----CCCCCC---CEEEEEEEchhhhhhheeeEEecc
Confidence 9999999965555555579999999999999999999988 999999 999999999999999999999743
No 28
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=100.00 E-value=6.2e-39 Score=296.68 Aligned_cols=284 Identities=24% Similarity=0.268 Sum_probs=221.8
Q ss_pred ceEEccccccCCCcccccccHHHHHhhhcC-CchhHHHHHHHHHhhhcccchHHHHHHHHHHHHHHcCCCCCCcCEEEEE
Q 047978 6 KFQETQRPQANPANCVYQTDYPDFYFRITS-SNHMTELKEKFKRMYILVPKVPKLGKEAVSKAIKEWGQPISKITHLISC 84 (320)
Q Consensus 6 ~~~I~a~~~~lP~~~i~~~e~~~~~~~~~~-~~~~~gi~~~~r~~~~~~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~ 84 (320)
.++|.++++|+|+++++++++.+.+ ... ....+|+.+ |++..++++..+|+.+|++++|+++|++++|||+||++
T Consensus 1 ~v~I~~i~~~lP~~~v~~~~~~~~~--~~~~~~~~~gi~~--r~~~~~~~~~~~l~~~a~~~aL~~ag~~~~~Id~li~~ 76 (324)
T cd00827 1 DVGIEAIGAYLPRYRVDNEELAEGL--GVDPGKYTTGIGQ--RHMAGDDEDVPTMAVEAARRALERAGIDPDDIGLLIVA 76 (324)
T ss_pred CccEEEEEecCCceeecHHHHHHHh--CCCcceeeeecce--eEecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEE
Confidence 3789999999999999999999887 221 122468887 88887789999999999999999999999999999999
Q ss_pred eeCC-CCCCCHHHHHHHHcCCCcc-------hhhhhhh--------hhcCCCCeEEEEEeecccccccCCCCCCchhhhh
Q 047978 85 SVSG-VDMPGADYQLTKLLGLKPS-------VKRVMLT--------AESNAGARVLVVCSEITVGTFRAPSDENLSCLVN 148 (320)
Q Consensus 85 s~t~-~~~p~~a~~l~~~LGl~~~-------~c~~~l~--------l~~~~~~~~LVv~~e~~s~~~~~~~~~~~~~~~~ 148 (320)
++++ +..|+.+.+|++.||+++. .|++.+. ++++..+++||+++|..+... +.. ...
T Consensus 77 ~~~~~~~~~~~~~~i~~~lg~~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~vlvv~~e~~~~~~-~~~------~~~ 149 (324)
T cd00827 77 TESPIDKGKSAATYLAELLGLTNAEAFDLKQACYGGTAALQLAANLVESGPWRYALVVASDIASYLL-DEG------SAL 149 (324)
T ss_pred cCCCCCCCccHHHHHHHHcCCCCCceeehhhhhHHHHHHHHHHHHHHHcCCCCEEEEEEEHHhhhcc-cCC------CCc
Confidence 9988 6688999999999999643 2665433 678889999999999998632 111 235
Q ss_pred hhhhccCceEEEEeecCCC---CCCCCeeEEeccCcee------cCCC-ccc----ccccccccc-------eechhHHH
Q 047978 149 RAIVGDGTAALIVGACPDI---NTERPLFHIVPTAQTI------LPDS-EDA----IKGHFRESP-------LIADNIDK 207 (320)
Q Consensus 149 ~~~~GDgAaA~ll~~~~~~---~~~~~~~~~~~~~~~~------~p~~-~~~----~~~~~~~~g-------~~~~~~~~ 207 (320)
.++|||||+|+||++++.. ++.. ....+.+... .... ... ....+.+++ ...+.+++
T Consensus 150 ~~~~gdgaaA~ll~~~~~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (324)
T cd00827 150 EPTLGDGAAAMLVSRNPGILAAGIVS--THSTSDPGYDFSPYPVMDGGYPKPCKLAYAIRLTAEPAGRAVFEAAHKLIAK 227 (324)
T ss_pred cccccCceEEEEEecCcccccCCcee--eeeecccccccCccceeccCCCcchhhhhhcceeecCCccchHHHHhHHHHH
Confidence 7899999999999988752 2221 1111111110 0000 000 001122221 34577889
Q ss_pred HHHHHhhhcCCCCCCCCceEEEEcCCCh-hHHHHHHHHcCCCcchhhhhHH-HHhccCCcccchHHHHHHHHHHhchhcC
Q 047978 208 FLAESFDQVSLNDHDWNSLFWMMHPIGP-AVLDQIEGKLGLEKTKLRETRH-VLSEYGNMASATVLFVLDEMRKRSVEEG 285 (320)
Q Consensus 208 ~i~~~l~~~g~~~~d~~~~~~i~h~~~~-~~~~~~~~~lg~~~e~~~~~~~-~~~~~Gn~~sasi~~~L~~~~~~~~~~g 285 (320)
+++++|++.+++ +|+ .+|++||+|+ .+++.+.++++++++++..++. ++++|||+++|++|++|++++++ +
T Consensus 228 ~~~~~l~~~~~~-~~i--~~~~~h~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~Gn~~sa~~~~~L~~~~~~----~ 300 (324)
T cd00827 228 VVRKALDRAGLS-EDI--DYFVPHQPNGKKILEAVAKKLGGPPEKASQTRWILLRRVGNMYAASILLGLASLLES----G 300 (324)
T ss_pred HHHHHHHHcccc-ccc--ceeeccCchHHHHHHHHHHHccchHhhhccchhhHHHHhCchHHHHHHHHHHHHHhc----C
Confidence 999999999999 875 3999999999 9999999999999998887643 79999999999999999999998 9
Q ss_pred CCCCCCCCceEEEEeeccchhhhheee
Q 047978 286 KATTGEELEWGVLLGFEAGLTVEAIVL 312 (320)
Q Consensus 286 ~l~~G~~~d~vll~~~G~G~~~~a~~l 312 (320)
++++| |+++++++|+|++++++++
T Consensus 301 ~~~~G---d~vl~~~~G~G~~~~~~~~ 324 (324)
T cd00827 301 KLKAG---DRVLLFSYGSGFTAEAFVL 324 (324)
T ss_pred CCCCC---CEEEEEEeccchhheeccC
Confidence 99999 9999999999999998764
No 29
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.
Probab=100.00 E-value=6.8e-39 Score=301.77 Aligned_cols=279 Identities=16% Similarity=0.140 Sum_probs=214.8
Q ss_pred eEEccccccCCCcccccccHHHHHhhhcCCchh-HHHHHHHHHhhhcccchHHHHHHHHHHHHHHcCCCCCCcCEEEEEe
Q 047978 7 FQETQRPQANPANCVYQTDYPDFYFRITSSNHM-TELKEKFKRMYILVPKVPKLGKEAVSKAIKEWGQPISKITHLISCS 85 (320)
Q Consensus 7 ~~I~a~~~~lP~~~i~~~e~~~~~~~~~~~~~~-~gi~~~~r~~~~~~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s 85 (320)
|+|.+++.|+|+++++++|+.+.. +.+.++. .+++.+.|++..++|++.+|+++|+++||+++ ++++||+||++|
T Consensus 1 iGI~~i~~y~P~~~v~~~ela~~~--g~~~~~~~~g~G~~~~~~~~~~ed~~~la~~Aa~~aL~~a--~~~~Id~li~~t 76 (379)
T TIGR01835 1 IGIDKISFFTPQNYLDMTALAEAR--GVDPEKFHIGIGQKKMAVPPIDEDIVTMAASAAKPILDRN--DKQKIDMVIFGT 76 (379)
T ss_pred CCEeEEEEECCCEEeeHHHHHHHh--CCCHHHHHhhcCceEEeeCCCCCCHHHHHHHHHHHHHHhC--CHhhCCEEEEEe
Confidence 689999999999999999999986 4555553 45555447777789999999999999999998 899999999999
Q ss_pred eCC-CCCCCHHHHHHHHcCCCcc--------hhhhhhh--------hhcCCCCeEEEEEeecccccccCCCCCCchhhhh
Q 047978 86 VSG-VDMPGADYQLTKLLGLKPS--------VKRVMLT--------AESNAGARVLVVCSEITVGTFRAPSDENLSCLVN 148 (320)
Q Consensus 86 ~t~-~~~p~~a~~l~~~LGl~~~--------~c~~~l~--------l~~~~~~~~LVv~~e~~s~~~~~~~~~~~~~~~~ 148 (320)
+|+ +..|+.+.+|++.||+++. .|.++++ +++++.++||||++|.... . +.+ ..
T Consensus 77 ~s~~~~~~s~a~~v~~~Lgl~~~~~~~dv~~aC~gg~~aL~~A~~~i~s~~~~~aLVv~~D~a~~--~-~~~------~~ 147 (379)
T TIGR01835 77 ESGIDQSKAAAVYVHGLLGLQPFCRSFELKQACYGATAALQMAKGHVALSPDRKVLVIASDIAKY--G-LES------PG 147 (379)
T ss_pred CCCCCCCCCHHHHHHHHhCCCCCceEEEeccccHHHHHHHHHHHHHHHcCCCCeEEEEEeehhhc--c-cCC------CC
Confidence 999 8889999999999999753 2776554 5678889999999998653 2 111 12
Q ss_pred hhhhccCceEEEEeecCCCCCCCCeeEEe------cc--CceecCCCcccccccccccc-----eechhHHHHHHHHhhh
Q 047978 149 RAIVGDGTAALIVGACPDINTERPLFHIV------PT--AQTILPDSEDAIKGHFRESP-----LIADNIDKFLAESFDQ 215 (320)
Q Consensus 149 ~~~~GDgAaA~ll~~~~~~~~~~~~~~~~------~~--~~~~~p~~~~~~~~~~~~~g-----~~~~~~~~~i~~~l~~ 215 (320)
..+|||||+|+||++++.. +.+. +. .....|.... ....+| .+.+.+++++++++++
T Consensus 148 ~~~~GdGA~A~Ll~~~~~i------~~~~~~~~~~t~~~~df~~p~~~~----~~~v~g~~s~~~y~~~~~~~~~~~l~~ 217 (379)
T TIGR01835 148 EPTQGAGAVAMLVSADPKL------LAINEDSVLYTDDIMDFWRPNYST----TALVDGQYSNEQYLNAFENAWNDYAKR 217 (379)
T ss_pred CccccCccEEEEEecCCCe------eEEeccceeeecCCCCccCCCCCC----ceeECcHHHHHHHHHHHHHHHHHHHHH
Confidence 4679999999999987531 1111 10 0111222111 122233 3457788999999999
Q ss_pred cCCCCCCCCceEEEEcCCChhHH----HHHHHHcCCCc-chhh----hhHHHHhccCCcccchHHHHHHHHHHhchhcC-
Q 047978 216 VSLNDHDWNSLFWMMHPIGPAVL----DQIEGKLGLEK-TKLR----ETRHVLSEYGNMASATVLFVLDEMRKRSVEEG- 285 (320)
Q Consensus 216 ~g~~~~d~~~~~~i~h~~~~~~~----~~~~~~lg~~~-e~~~----~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g- 285 (320)
+|++++|+ .+|++||++.++. +.+.+.++++. +++. .++.+.++||||++||++++|++++++ +
T Consensus 218 ~g~~~~di--d~~i~H~p~~~~~~k~~~~~l~~~~~~~~~~~~~~~~~s~~~~~~~GN~~sas~~l~L~~~l~~----~~ 291 (379)
T TIGR01835 218 TGLSLADF--AAFCFHVPFTKMGLKALRHILKKNYEDEDESVQNAYLESIIYNREVGNLYTGSLYLGLASLLEN----AF 291 (379)
T ss_pred hCCCHHHc--CEEEECCCCCcHHHHHHHHHHhhcccccHHHHHHHhhhhhhhhhhcCchHhHHHHHHHHHHHHh----cc
Confidence 99999986 3999999988773 44566777773 3333 234468999999999999999999987 6
Q ss_pred CCCCCCCCceEEEEeeccchhhhheeeeeccC
Q 047978 286 KATTGEELEWGVLLGFEAGLTVEAIVLRSIPM 317 (320)
Q Consensus 286 ~l~~G~~~d~vll~~~G~G~~~~a~~l~~~~~ 317 (320)
++++| |+|+|+|||+|+......++..|.
T Consensus 292 ~~~~G---d~ill~s~GsG~~ae~~~~~~~~~ 320 (379)
T TIGR01835 292 EDTTG---DKIGLFSYGSGAVAEFFSGTLVAG 320 (379)
T ss_pred cCCCC---CEEEEEEecCCcceeeEEEEEccc
Confidence 78999 999999999999999888887653
No 30
>PLN02192 3-ketoacyl-CoA synthase
Probab=100.00 E-value=1.4e-37 Score=296.88 Aligned_cols=299 Identities=16% Similarity=0.176 Sum_probs=201.0
Q ss_pred ceEEccccccCCCc--ccccccHHHHHhhh--cCCc---hh------HHHHHHH---H---------HhhhcccchHHHH
Q 047978 6 KFQETQRPQANPAN--CVYQTDYPDFYFRI--TSSN---HM------TELKEKF---K---------RMYILVPKVPKLG 60 (320)
Q Consensus 6 ~~~I~a~~~~lP~~--~i~~~e~~~~~~~~--~~~~---~~------~gi~~~~---r---------~~~~~~e~~~~la 60 (320)
.|++.-.+.|-|+. .++.+.+.+..... .+.+ +. +|++++. + .+....+...++.
T Consensus 101 ~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sglg~~t~~p~~~~~~~~~~~~~~~~~Ea~~~~ 180 (511)
T PLN02192 101 PVYLVDFSCYKPDDSRKCTRKIFMDRSKLTGSFTEENLEFQRKILERSGLGESTYLPEAVLNVPPNPCMAEARKEAETVM 180 (511)
T ss_pred cEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHhcCCCCcccCChhhccCCCCccHHHHHHHHHHHH
Confidence 59999999999987 47788777765211 1222 22 2333210 0 0111234467889
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEEeeCC-CCCCCHHHHHHHHcCCCcc---------hhhhhhh--------hhcCCCCe
Q 047978 61 KEAVSKAIKEWGQPISKITHLISCSVSG-VDMPGADYQLTKLLGLKPS---------VKRVMLT--------AESNAGAR 122 (320)
Q Consensus 61 ~~Aa~~aL~~ag~~~~dId~li~~s~t~-~~~p~~a~~l~~~LGl~~~---------~c~~~l~--------l~~~~~~~ 122 (320)
..|+++||+++|++|+|||+||++ +++ +..|+.+++|+++||++++ .|+++++ +++++.++
T Consensus 181 ~~Aa~~aL~kaGi~p~DIDiLIv~-~S~~~~~PSlaa~I~n~lGlr~~i~afdLsgmGCSggl~aLdlA~~lL~a~~~~~ 259 (511)
T PLN02192 181 FGAIDQLLAKTSVKPKDIGILIVN-CSLFNPTPSLSAMVINHYKLRGNILSYNLGGMGCSAGLISIDLAKHLLQVHPNSY 259 (511)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEE-CCCCCCCchHHHHHHHHhCCCCCceEEEcccchhhhHHHHHHHHHHHHHcCCCCe
Confidence 999999999999999999999877 456 8899999999999999843 4888776 67889999
Q ss_pred EEEEEeecccccccCCCCCCchhhhhhhhhccCceEEEEeecCCCCCCCCeeEEeccCceecCCCccccccc-c--cccc
Q 047978 123 VLVVCSEITVGTFRAPSDENLSCLVNRAIVGDGTAALIVGACPDINTERPLFHIVPTAQTILPDSEDAIKGH-F--RESP 199 (320)
Q Consensus 123 ~LVv~~e~~s~~~~~~~~~~~~~~~~~~~~GDgAaA~ll~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-~--~~~g 199 (320)
||||++|..|.++....| +...+..++|||||+|+||++++... .++.+++.+.-....+.+...++.. . ..+|
T Consensus 260 aLVVstE~~S~n~y~g~d--rs~lv~n~LFgDGAaAvLLs~~~~~~-~~~k~~L~~~vrt~~~~dd~~~~~v~~~ed~~g 336 (511)
T PLN02192 260 ALVISMENITLNWYFGND--RSMLVSNCLFRMGGAAILLSNKRSDR-RRSKYQLVHTVRTHKGADDKCFACVTQEEDSAG 336 (511)
T ss_pred EEEEEEEeccccCCCCCC--HHHHhccccccccceEEEEecccccc-ccccceeeeeEEEEecCChhhccceeccccccc
Confidence 999999999965532233 33344558999999999999854321 1112233211111111110000000 0 0000
Q ss_pred ----eechhH----------------------------------HHHHHHHhhhcCCC-CCCCCceEEEEcCCChhHHHH
Q 047978 200 ----LIADNI----------------------------------DKFLAESFDQVSLN-DHDWNSLFWMMHPIGPAVLDQ 240 (320)
Q Consensus 200 ----~~~~~~----------------------------------~~~i~~~l~~~g~~-~~d~~~~~~i~h~~~~~~~~~ 240 (320)
...+.+ ++..+..++..--. ..++ .+|++||+|+++++.
T Consensus 337 ~~g~~Lskdl~~vag~al~~ni~~l~p~vlp~~e~~~~~~~m~gr~vfk~~~~~~~p~~~~~I--dhf~iHqggr~IId~ 414 (511)
T PLN02192 337 KIGVSLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKLKPYIPDFKLAF--EHFCIHAGGRAVLDE 414 (511)
T ss_pred ceeeEecchhhhhhhhhhhhhhhhcccccCccchhhceeEEEcChHHHHHHhhhccHHHHHhh--ceEeeccCCHHHHHH
Confidence 000111 11111111110000 0233 399999999999999
Q ss_pred HHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCCCCCCceEEEEeeccchhhhheeeeeccC
Q 047978 241 IEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEAIVLRSIPM 317 (320)
Q Consensus 241 ~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~~l~~~~~ 317 (320)
+++.||++++++..++.++++||||+|+|+|+.|+++.++ |++++| |++++++||+|++|++++|||..-
T Consensus 415 v~k~LgL~~~~~e~sr~tL~rfGNTSSaSI~~aL~~~eak----grik~G---DrVl~iaFGsGf~~~sav~~~~~~ 484 (511)
T PLN02192 415 LEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAK----GRIKKG---DRTWQIAFGSGFKCNSAVWKALRT 484 (511)
T ss_pred HHHHcCCCchhhhHHHHHHhHcCChHHhHHHHHHHHHHHc----CCCCCC---CEEEEEEEcchHhhhhhheeeecc
Confidence 9999999985555555689999999999999999999988 999999 999999999999999999999743
No 31
>PLN00415 3-ketoacyl-CoA synthase
Probab=100.00 E-value=7.6e-37 Score=287.53 Aligned_cols=298 Identities=17% Similarity=0.216 Sum_probs=216.8
Q ss_pred cceEEccccccCCCc--ccccccHHHHHhhh--cCCc---hhH------HHHHHH---------HHhhh--cccchHHHH
Q 047978 5 GKFQETQRPQANPAN--CVYQTDYPDFYFRI--TSSN---HMT------ELKEKF---------KRMYI--LVPKVPKLG 60 (320)
Q Consensus 5 ~~~~I~a~~~~lP~~--~i~~~e~~~~~~~~--~~~~---~~~------gi~~~~---------r~~~~--~~e~~~~la 60 (320)
+.|++.-.+.|-|+. .++.+.+.+..... .+.+ +++ ||+++. +.... +.....+|+
T Consensus 58 ~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~F~~~i~~rSGlg~et~~p~~~~~~~~~~~~~~~~~e~em~ 137 (466)
T PLN00415 58 KPVYLVDFSCHQPTDSCKISSETFFNMAKGAQLYTEETIQFMTRILNRSGLGDDTYSPRCMLTSPPTPSMYEARHESELV 137 (466)
T ss_pred CcEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCCCCeeeCCccccCCCCCChhhhHHHHHHH
Confidence 358999999999876 47778777765211 1111 222 232200 11111 233456676
Q ss_pred HH-HHHHHHHHcCCCCCCcCEEEEEeeCC-CCCCCHHHHHHHHcCCCcc---------hhhhhhh--------hhcCCCC
Q 047978 61 KE-AVSKAIKEWGQPISKITHLISCSVSG-VDMPGADYQLTKLLGLKPS---------VKRVMLT--------AESNAGA 121 (320)
Q Consensus 61 ~~-Aa~~aL~~ag~~~~dId~li~~s~t~-~~~p~~a~~l~~~LGl~~~---------~c~~~l~--------l~~~~~~ 121 (320)
.. |+++||+++|++|+|||+|| +++|+ +..|+.+..|+++||++++ .|+++++ +++++.+
T Consensus 138 i~~A~~~aL~~aGi~p~dID~LI-vs~T~~~~~Pslaa~l~~~LGLr~~v~~~dL~gmGCsggv~aL~lA~~ll~a~~~~ 216 (466)
T PLN00415 138 IFGALNSLFKKTGIEPREVGIFI-VNCSLFNPNPSLSSMIVNRYKLKTDVKTYNLSGMGCSAGAISVDLATNLLKANPNT 216 (466)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEE-EECcCCCCCchHHHHHHHHhCCCCCceEEEeccccchHHHHHHHHHHHHHHhCCCC
Confidence 55 88899999999999999998 56788 6899999999999999954 2777765 6788999
Q ss_pred eEEEEEeecccccccCCCCCCchhhhhhhhhccCceEEEEeecCCCCCCCCeeEE---eccCceecCCCccccc---ccc
Q 047978 122 RVLVVCSEITVGTFRAPSDENLSCLVNRAIVGDGTAALIVGACPDINTERPLFHI---VPTAQTILPDSEDAIK---GHF 195 (320)
Q Consensus 122 ~~LVv~~e~~s~~~~~~~~~~~~~~~~~~~~GDgAaA~ll~~~~~~~~~~~~~~~---~~~~~~~~p~~~~~~~---~~~ 195 (320)
+||||++|.+|.++.++.| +...+..++|||||+|+||++++... ..+.+++ +.... |.+++.+. +..
T Consensus 217 ~aLVVs~E~~S~~~~~~~d--r~~lv~n~LFgDGAAAvlLs~~~~~~-~~~~~~L~~~vrt~~---~~~d~~~~~~~~~~ 290 (466)
T PLN00415 217 YAVIVSTENMTLSMYRGND--RSMLVPNCLFRVGGAAVMLSNRSQDR-VRSKYELTHIVRTHK---GSSDKHYTCAEQKE 290 (466)
T ss_pred EEEEEEEecccccccCCCc--HhHhccceeecccceEEEEecCcccc-cCccceeeeEEEecC---CCChhhhcceeeee
Confidence 9999999999976644444 34455679999999999999865421 1234443 33322 55444443 455
Q ss_pred cccc----eechhHHHHHHHHhh-------hcC----------------------CCC--CCCCc-e-EEEEcCCChhHH
Q 047978 196 RESP----LIADNIDKFLAESFD-------QVS----------------------LND--HDWNS-L-FWMMHPIGPAVL 238 (320)
Q Consensus 196 ~~~g----~~~~~~~~~i~~~l~-------~~g----------------------~~~--~d~~~-~-~~i~h~~~~~~~ 238 (320)
+++| ...+.+|.++.+.++ ... +++ .|++. + +|++|+++++++
T Consensus 291 d~~G~~gv~Lsk~lp~va~~~l~~ni~~l~p~vlp~~e~~~~~~~~i~~~~~~~~~~~~~pd~~~~~~hf~iHpGGraVL 370 (466)
T PLN00415 291 DSKGIVGVALSKELTVVAGDTLKTNLTALGPLVLPLSEKLRFILFLVKSKLFRLKVSPYVPDFKLCFKHFCIHAGGRALL 370 (466)
T ss_pred cCCCcceEEEChHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHhhhhhhccCCCCCCCccccceeEEecCCcHHHH
Confidence 5556 245566655444422 111 222 13321 3 899999999999
Q ss_pred HHHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCCCCCCceEEEEeeccchhhhheeeeecc
Q 047978 239 DQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEAIVLRSIP 316 (320)
Q Consensus 239 ~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~~l~~~~ 316 (320)
+.+++.|+++++++..+|+++++||||+|+|+++.|+++.++ ++.++| |++++++||+|+++++++||+..
T Consensus 371 dave~~LgL~~~~le~Sr~vL~r~GN~SSsSV~yvL~~~~~~----~~~~~G---drvl~iaFGpGf~~es~v~~~~~ 441 (466)
T PLN00415 371 DAVEKGLGLSEFDLEPSRMTLHRFGNTSSSSLWYELAYVEAK----CRVKRG---DRVWQLAFGSGFKCNSIVWRALR 441 (466)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHhCCchhhhHHHHHHHHHhh----ccCCCC---CEEEEEEEcCcchhhHhHHHHhc
Confidence 999999999999999999999999999999999999999988 889999 99999999999999999999974
No 32
>PLN02577 hydroxymethylglutaryl-CoA synthase
Probab=100.00 E-value=1.6e-37 Score=294.87 Aligned_cols=283 Identities=18% Similarity=0.146 Sum_probs=216.3
Q ss_pred ceEEccccccCCCcccccccHHHHHhhhcCCchh-HHHHHHHHHh--hhcccchHHHHHHHHHHHHHHcCCCCCCcCEEE
Q 047978 6 KFQETQRPQANPANCVYQTDYPDFYFRITSSNHM-TELKEKFKRM--YILVPKVPKLGKEAVSKAIKEWGQPISKITHLI 82 (320)
Q Consensus 6 ~~~I~a~~~~lP~~~i~~~e~~~~~~~~~~~~~~-~gi~~~~r~~--~~~~e~~~~la~~Aa~~aL~~ag~~~~dId~li 82 (320)
+++|.++|.|+|+++++|+|+.+.+ +.+++|+ +||++ |++ +.++|++.+||++||+++|+++|++|++||+||
T Consensus 4 ~vgI~gig~Y~P~~~v~n~eLa~~~--g~~~~~~~~GI~~--r~~ava~~~Ed~~tmA~~AA~~aL~~agid~~~Idlli 79 (459)
T PLN02577 4 NVGILAMEVYFPPTCVQQEALEAHD--GVSKGKYTIGLGQ--DCMAFCTDVEDVISMSLTVVKSLLEKYNIDPKQIGRLE 79 (459)
T ss_pred ccEEEEEEEeCCCeEEcHHHHHHHh--CCCHHHHhhccce--eEeccCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 5899999999999999999999987 5666774 68988 555 457999999999999999999999999999999
Q ss_pred EEeeCC-CCCCCHHHHHH---HHcCCCcc-------hhhhhhh--------hhcCC--CCeEEEEEeecccccccCCCCC
Q 047978 83 SCSVSG-VDMPGADYQLT---KLLGLKPS-------VKRVMLT--------AESNA--GARVLVVCSEITVGTFRAPSDE 141 (320)
Q Consensus 83 ~~s~t~-~~~p~~a~~l~---~~LGl~~~-------~c~~~l~--------l~~~~--~~~~LVv~~e~~s~~~~~~~~~ 141 (320)
++|+|+ +..|+++.+|+ ++||.+++ .|.|+++ ++++. .++||||++|..+. ...|.
T Consensus 80 vaTeT~~d~~ps~A~~v~~ll~~LG~~~~~afDi~~AC~G~~~AL~~A~~~i~sg~~~~~~aLVV~aD~a~~-~~~~~-- 156 (459)
T PLN02577 80 VGSETVIDKSKSIKTFLMQLFEESGNTDIEGVDSTNACYGGTAALLNCVNWVESSSWDGRYGLVVAADSAVY-AEGPA-- 156 (459)
T ss_pred EEcCCCCCCCCchHHHHHHHHHHhCCCCcEEeehhhhhHHHHHHHHHHHHHHHcCCCCCCeEEEEEechhhc-cCCCC--
Confidence 999999 89999998886 67787653 3888765 56665 69999999999875 22232
Q ss_pred CchhhhhhhhhccCceEEEEeecCCCCCCCCeeEEeccCc-----eecCCCcccccccccccc-----eechhHHHHHHH
Q 047978 142 NLSCLVNRAIVGDGTAALIVGACPDINTERPLFHIVPTAQ-----TILPDSEDAIKGHFRESP-----LIADNIDKFLAE 211 (320)
Q Consensus 142 ~~~~~~~~~~~GDgAaA~ll~~~~~~~~~~~~~~~~~~~~-----~~~p~~~~~~~~~~~~~g-----~~~~~~~~~i~~ 211 (320)
...+||||+|+||+.++...++. ...+.++ .+.|.... .++.++| .+.+.++.++++
T Consensus 157 -------e~t~GdGA~A~lv~~~~~~~l~~---~~~g~~~~~~~Df~rP~~~~---~~~~vdG~~s~~~yl~~~~~~~~~ 223 (459)
T PLN02577 157 -------RPTGGAGAVAMLVGPNAPIVFES---KYRGSHMAHVYDFYKPDLAS---EYPVVDGKLSQTCYLMALDSCYKR 223 (459)
T ss_pred -------CCCCCcceEEEEEccCCCceeec---ccccccCcccchhcccCCCC---CceEEcchHHHHHHHHHHHHHHHH
Confidence 24559999999999765421110 0111111 12333211 1355566 456788888888
Q ss_pred Hhhhc------CCCCCCCCceEEEEcCCChhHHHHHHHHcCCC-------------------------------------
Q 047978 212 SFDQV------SLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLE------------------------------------- 248 (320)
Q Consensus 212 ~l~~~------g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~------------------------------------- 248 (320)
++++. |++++|+ ++++|||+..++.++..+.|.+.
T Consensus 224 ~~~k~~~~~~~g~~~~d~--d~~vfHqP~~km~~ka~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (459)
T PLN02577 224 FCEKYEKLEGKQFSISDA--DYFVFHAPYNKLVQKSFARLVYNDFQRNASSVDEDAKEKLAPFAGLSSDESYQNRDLEKV 301 (459)
T ss_pred HHHHhhcccccCCCHHHc--CEEEecCCccchhHHHHHHHhhhhhhhccccccchhhhccccccccchhhccccchHHHH
Confidence 88777 7788886 39999999998887766555411
Q ss_pred ---------cchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCC-CCCCCCCceEEEEeeccchhhhheeeeeccC
Q 047978 249 ---------KTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGK-ATTGEELEWGVLLGFEAGLTVEAIVLRSIPM 317 (320)
Q Consensus 249 ---------~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~-l~~G~~~d~vll~~~G~G~~~~a~~l~~~~~ 317 (320)
.+|+..+...-++.||+.++|+++.|..+++. .. ..+| ++|+++|||+|+..+...+++.|-
T Consensus 302 ~~~~~~~~~~~kv~ps~~~~~~vGN~YTaSlyl~L~SlL~~----~~~~~~G---~rIg~fSYGSG~~se~fs~~v~~~ 373 (459)
T PLN02577 302 SQQVAKPLYDAKVQPTTLIPKQVGNMYTASLYAALASLVHN----KHSELAG---KRILMFSYGSGLTATMFSLRLHEG 373 (459)
T ss_pred HHHhhHHHHHHhhccHhHHHHhcCcccchHHHHHHHHHHhh----ccccCCC---CEEEEEeecCCccceeEEEEEeCC
Confidence 13444444467889999999999999999976 32 3488 999999999999999999988764
No 33
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=100.00 E-value=1.5e-35 Score=269.41 Aligned_cols=289 Identities=18% Similarity=0.203 Sum_probs=226.2
Q ss_pred ceEEccccccCCCcccccccHHHHHhhhcCCch-hHHHHHHHHHhhhcccchHHHHHHHHHHHHHHcCCCCCCcCEEEEE
Q 047978 6 KFQETQRPQANPANCVYQTDYPDFYFRITSSNH-MTELKEKFKRMYILVPKVPKLGKEAVSKAIKEWGQPISKITHLISC 84 (320)
Q Consensus 6 ~~~I~a~~~~lP~~~i~~~e~~~~~~~~~~~~~-~~gi~~~~r~~~~~~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~ 84 (320)
+++|.+++.|+|..++..+|+++.+ +.+.+. ..|++..++.+..++|++.+||++||+++|.++++||.+|++|+++
T Consensus 2 ~iGI~~~g~y~p~~~i~~~ela~~~--g~d~~k~~~gl~~~e~sv~~~~ED~vTmaveAA~~~l~r~~~D~~~Ig~v~vg 79 (377)
T COG3425 2 MIGIVGIGAYIPRYRIKLEELARAW--GVDPEKIKKGLGVEEKSVPPWDEDAVTMAVEAARNALKRADIDPSKIGAVIVG 79 (377)
T ss_pred ccccceEEEeccceEeeHHHHHhhc--CCChHHhhhccccccccCCCCchhHHHHHHHHHHHHHhccCCCHHHCceEEEe
Confidence 5899999999999999999999987 433443 4566555588998999999999999999999999999999999999
Q ss_pred eeCC-CCCCCHHHHHHHHcCCCcch--------hhh----hhh----hhcCCCCeEEEEEeecccccccCCCCCCchhhh
Q 047978 85 SVSG-VDMPGADYQLTKLLGLKPSV--------KRV----MLT----AESNAGARVLVVCSEITVGTFRAPSDENLSCLV 147 (320)
Q Consensus 85 s~t~-~~~p~~a~~l~~~LGl~~~~--------c~~----~l~----l~~~~~~~~LVv~~e~~s~~~~~~~~~~~~~~~ 147 (320)
|.|+ +...+++.+|++.||+.+.+ |.+ +.+ +.++..+++|||++|..-. . |.+ .
T Consensus 80 TES~~d~~K~~at~v~~~lg~~~~~~~~d~~~AC~agT~aL~~a~~~v~s~~~~~~LvI~sD~a~~--~-~~~------~ 150 (377)
T COG3425 80 SESGPDAVKPTATIVAEALGLNPSARAADVEFACYAGTAALQAAIGWVESGMISYGLVIGADTAQY--A-PGD------A 150 (377)
T ss_pred cCCCcccccchHHHHHHHhCCCCceehhhHHHHHHHHHHHHHHHHHHHHcCCccceEEEeehhhcc--C-CCc------c
Confidence 9999 99999999999999999864 321 111 6788889999999998853 1 222 1
Q ss_pred hhhhhccCceEEEEeecCCCC--CCCCeeEEeccCceecCCCcc--cccccccccceechhHHHHHHHHhhhcCCCCCCC
Q 047978 148 NRAIVGDGTAALIVGACPDIN--TERPLFHIVPTAQTILPDSED--AIKGHFRESPLIADNIDKFLAESFDQVSLNDHDW 223 (320)
Q Consensus 148 ~~~~~GDgAaA~ll~~~~~~~--~~~~~~~~~~~~~~~~p~~~~--~~~~~~~~~g~~~~~~~~~i~~~l~~~g~~~~d~ 223 (320)
.....|+||+|+||++++... ++.........-..+.|.... .++.++... -+.+.+..+.++++++.|++++|+
T Consensus 151 ~E~t~GAGavA~lIg~n~~~~a~~~~~~syt~d~~DFwRp~~~~yp~~dg~~s~~-~Y~~~~~~a~~~~~~k~gls~~df 229 (377)
T COG3425 151 LEYTAGAGAVAFLIGKNPPIVAEFEGTGSYTTDTPDFWRPDGQPYPYVDGRFSEP-AYFKHVENAAKGYMEKTGLSPDDF 229 (377)
T ss_pred cCccCCCceEEEEEccCCCeEEEecCceEEecCCCcccccCCCcccccCceecHH-HHHHHHHHHHHHHHHHhCCChhhh
Confidence 246779999999999974421 111011111111122333221 111222222 246788889999999999999997
Q ss_pred CceEEEEcCCChhHHHHHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCCCCCCceEEEEeecc
Q 047978 224 NSLFWMMHPIGPAVLDQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEA 303 (320)
Q Consensus 224 ~~~~~i~h~~~~~~~~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~ 303 (320)
+++++|||+.++..+.++.++.+.+++..+....++.||++++|+++.|..+|+. .+ .+| |+|+++|||+
T Consensus 230 --dy~vfH~P~~k~~~ka~k~l~~~~e~v~~~l~~~~~vGN~YtgS~~L~Las~L~~----a~-~~G---~rIl~~SYGS 299 (377)
T COG3425 230 --DYIVFHQPNGKFPKKAAKSLGFKEEQVKPGLVYPQRIGNTYTGSLLLGLASLLDN----AK-LPG---DRILLFSYGS 299 (377)
T ss_pred --CeEEecCCCCchHHHHHHHhCccHhhcCccchhhhhcCcccchhHHHHHHHHHhh----cC-CCC---CEEEEEeeCC
Confidence 4999999999999999999999999999987777789999999999999999998 44 689 9999999999
Q ss_pred chhhhheeeeecc
Q 047978 304 GLTVEAIVLRSIP 316 (320)
Q Consensus 304 G~~~~a~~l~~~~ 316 (320)
|....+...+..+
T Consensus 300 Ga~s~~fs~~v~~ 312 (377)
T COG3425 300 GAGSEAFSITVTD 312 (377)
T ss_pred CcceeEEEEEecc
Confidence 9998877766543
No 34
>TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade. Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes.
Probab=100.00 E-value=9.6e-34 Score=268.71 Aligned_cols=290 Identities=18% Similarity=0.158 Sum_probs=202.4
Q ss_pred ceEEccccccCCCcccccccHHHHHhhhcCCchh-HHHHHHHHHhhhcccchHHHHHHHHHHHHHHcCCCCCCcCEEEEE
Q 047978 6 KFQETQRPQANPANCVYQTDYPDFYFRITSSNHM-TELKEKFKRMYILVPKVPKLGKEAVSKAIKEWGQPISKITHLISC 84 (320)
Q Consensus 6 ~~~I~a~~~~lP~~~i~~~e~~~~~~~~~~~~~~-~gi~~~~r~~~~~~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~ 84 (320)
+|+|.+++.|+|+++++|+|+++.. +.+.+++ +||+++.++++.++|++.+||++||+++|++++++|++||+||++
T Consensus 1 ~vgI~~ig~y~P~~~v~~~eLa~~~--g~~~~k~~~GI~~rr~av~~~~Ed~~tma~~AA~~lL~~a~id~~~Id~Liv~ 78 (454)
T TIGR01833 1 DVGILALEIYFPSQYVDQAELEKYD--GVSAGKYTIGLGQTKMGFCTDREDINSLCLTVVSKLMERYNIDYNQIGRLEVG 78 (454)
T ss_pred CcEEEEEEEeCCCeEEcHHHHHHhc--CCCHHHheechhheecccCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEE
Confidence 4899999999999999999999876 4445554 788883333567899999999999999999999999999999999
Q ss_pred eeCC-CCCCCHHHHHHHHc---CCCcc-------hhhhhhh--------hhcC--CCCeEEEEEeecccccccCCCCCCc
Q 047978 85 SVSG-VDMPGADYQLTKLL---GLKPS-------VKRVMLT--------AESN--AGARVLVVCSEITVGTFRAPSDENL 143 (320)
Q Consensus 85 s~t~-~~~p~~a~~l~~~L---Gl~~~-------~c~~~l~--------l~~~--~~~~~LVv~~e~~s~~~~~~~~~~~ 143 (320)
|.|+ +..|+.+.+|++.| |.+++ .|.|+++ ++++ +.++||||++|.... . +.
T Consensus 79 TeS~~d~sps~a~~v~~lL~~lG~~~~~~fDi~~AC~G~t~AL~~A~~~i~s~~~~~~~aLVV~sDia~y--~---~~-- 151 (454)
T TIGR01833 79 TETIIDKSKSVKTVLMQLFEESGNTDVEGIDTTNACYGGTAALFNAINWIESSSWDGRYALVVAGDIAVY--A---KG-- 151 (454)
T ss_pred CCCCCCCCCchHHHHHHHHHhcCCCCceEEeccccchhHHHHHHHHHHHHHcCCcCCCeEEEEEeccccc--c---CC--
Confidence 9999 99999999999955 45543 3777754 5555 369999999999532 1 11
Q ss_pred hhhhhhhhhccCceEEEEeecCCCCCCC--CeeEEeccCceecCCCcccccccccccc-ee----chhHHHH-------H
Q 047978 144 SCLVNRAIVGDGTAALIVGACPDINTER--PLFHIVPTAQTILPDSEDAIKGHFRESP-LI----ADNIDKF-------L 209 (320)
Q Consensus 144 ~~~~~~~~~GDgAaA~ll~~~~~~~~~~--~~~~~~~~~~~~~p~~~~~~~~~~~~~g-~~----~~~~~~~-------i 209 (320)
....++||||+|+||++++...++. ...........+.|..... +...+| +. .+.+.++ +
T Consensus 152 ---~~~~t~GaGAvAmLv~~~~~~~~~~~~~~~~~~~~~DF~rP~~~~~---~p~vdg~~S~~~Yl~a~~~~y~~y~~~~ 225 (454)
T TIGR01833 152 ---NARPTGGAGAVAMLIGPNAPIVFERGLRGSHMQHAYDFYKPDLASE---YPVVDGKLSIQCYLSALDRCYKSYCKKI 225 (454)
T ss_pred ---CeeeccccceEEEEeccCccceecCccceEEEeecccccCCCCCCc---ccccCCccCHHHHHHHHHHHHHHHHHHH
Confidence 1245779999999999887632221 1122222223334543110 122233 22 2222222 2
Q ss_pred HHHhhhc----CCCCCCCCceEEEEcCCChhHHHHH-HHHc----C----------------------------------
Q 047978 210 AESFDQV----SLNDHDWNSLFWMMHPIGPAVLDQI-EGKL----G---------------------------------- 246 (320)
Q Consensus 210 ~~~l~~~----g~~~~d~~~~~~i~h~~~~~~~~~~-~~~l----g---------------------------------- 246 (320)
..++++. +..++|+ ++++||+|..++..+. .+.+ .
T Consensus 226 ~~a~~~~~~~~~~~~~df--d~~~fH~P~~km~~ka~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (454)
T TIGR01833 226 EKQWGKSGGDRKFTLNDF--DYMVFHSPYCKLVQKSLARLLYNDFLRNPSSIDTALYEGLEALSTLKLEDTYFDRDLEKA 303 (454)
T ss_pred HHhhhhhccccCCCHhHc--CEEeccCCcccHHHHHHHHHHHhhhhhccccccchhhcccchhhccccccccchhhHHHH
Confidence 2222222 4667776 3999999998887665 2222 1
Q ss_pred -------CCcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCCCCCCceEEEEeeccchhhhheeeeeccC
Q 047978 247 -------LEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEAIVLRSIPM 317 (320)
Q Consensus 247 -------~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~~l~~~~~ 317 (320)
...+|+..+...-++.||+.++|+++.|..+++... .....| ++|+|+|||+|+..+...+++.|-
T Consensus 304 ~~~~~~~~~~~kv~ps~~~~~~vGN~YtaSlyl~L~Sll~~~~--~~~~~g---~ri~~fSYGSG~~se~fs~~v~~~ 376 (454)
T TIGR01833 304 FMKASKELFDKKTKPSLLVPNQVGNMYTASLYGCLASLLSSKS--AQELAG---KRVGMFSYGSGLAASMFSLRVSQD 376 (454)
T ss_pred HHhhhhhhHHHhhcchhHHHHhcCchhhhHHHHHHHHHHhhCC--ccccCC---CEEEEEeccCCcceeeEEEEEeCC
Confidence 111445445445678999999999999999998611 114568 999999999999999999988864
No 35
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=99.94 E-value=6.4e-27 Score=208.87 Aligned_cols=222 Identities=27% Similarity=0.284 Sum_probs=174.8
Q ss_pred chHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCC-CCCCCHHHHHHHHcCCCcc-------hhhhhhh--------hhcC
Q 047978 55 KVPKLGKEAVSKAIKEWGQPISKITHLISCSVSG-VDMPGADYQLTKLLGLKPS-------VKRVMLT--------AESN 118 (320)
Q Consensus 55 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~-~~~p~~a~~l~~~LGl~~~-------~c~~~l~--------l~~~ 118 (320)
+..+|+.+|++++|+++|++++|||.||++++++ +..|+.+.+|+..||+++. .|++++. ++++
T Consensus 6 ~~~~l~~~A~~~al~~ag~~~~~i~~li~~~~~~~~~~~~~a~~i~~~lg~~~~~~~~i~~~C~s~~~al~~A~~~i~~g 85 (254)
T cd00327 6 TASELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGISGGPAYSVNQACATGLTALALAVQQVQNG 85 (254)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCceEEEEEECCCCccccHHHHHHHHHhCCCCCCcceeccHhHHHHHHHHHHHHHHHCC
Confidence 4789999999999999999999999999999999 6789999999999999532 3766544 7889
Q ss_pred CCCeEEEEEeecccccccCCCCCCchhhhhhhhhccCceEEEEeecCCCC--CCCCeeEEeccCceecCCCccccccccc
Q 047978 119 AGARVLVVCSEITVGTFRAPSDENLSCLVNRAIVGDGTAALIVGACPDIN--TERPLFHIVPTAQTILPDSEDAIKGHFR 196 (320)
Q Consensus 119 ~~~~~LVv~~e~~s~~~~~~~~~~~~~~~~~~~~GDgAaA~ll~~~~~~~--~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 196 (320)
..+++||+++|. ++|||||+|+||++++... -..+..++........+... ...
T Consensus 86 ~~~~~lv~~~e~-------------------~~~gdGAaa~vL~~~~~a~~~~~~~~~~i~~~~~~~~~~~~-----~~~ 141 (254)
T cd00327 86 KADIVLAGGSEE-------------------FVFGDGAAAAVVESEEHALRRGAHPQAEIVSTAATFDGASM-----VPA 141 (254)
T ss_pred CCCEEEEEecce-------------------eeecceEEEEEECcHHHHHHCCCceEEEEEEEEEcCCCCCC-----CCC
Confidence 999999999986 5679999999999865421 11123344332211111110 001
Q ss_pred ccceechhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHHHHHHcCCCcchhh--hhHHHHhccCCcccchHHHHH
Q 047978 197 ESPLIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKTKLR--ETRHVLSEYGNMASATVLFVL 274 (320)
Q Consensus 197 ~~g~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e~~~--~~~~~~~~~Gn~~sasi~~~L 274 (320)
...+.++++++++|+++|++++|+ +++++|+.+..+++.+.+.+++++++.. ....+..+|||+++|+.++.|
T Consensus 142 ---~~~~~~~~~i~~~l~~ag~~~~di--d~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~as~~~~l 216 (254)
T cd00327 142 ---VSGEGLARAARKALEGAGLTPSDI--DYVEAHGTGTPIGDAVELALGLDPDGVRSPAVSATLIMTGHPLGAAGLAIL 216 (254)
T ss_pred ---CChHHHHHHHHHHHHHcCCCHHHC--CEEEccCCcCccccHHHHHHHHHHhCCCCCceeccccccccchHHHHHHHH
Confidence 235778899999999999999987 3999999999999999999998887763 111268899999999999999
Q ss_pred HHHHHhchhcCCCC-------CCCCCceEEEEeeccchhhhheee
Q 047978 275 DEMRKRSVEEGKAT-------TGEELEWGVLLGFEAGLTVEAIVL 312 (320)
Q Consensus 275 ~~~~~~~~~~g~l~-------~G~~~d~vll~~~G~G~~~~a~~l 312 (320)
..+++. .+.+ +| ++++++++|.|++++++++
T Consensus 217 ~~~~~~----~~~~~~~~~~~~~---~~~l~~~~g~Gg~~~~~~l 254 (254)
T cd00327 217 DELLLM----LEHEFIPPTPREP---RTVLLLGFGLGGTNAAVVL 254 (254)
T ss_pred HHHHHH----HhCCCcCCCCCCc---CEEEEeeEcCCCcceEEEC
Confidence 999987 4443 66 9999999999999998875
No 36
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=99.92 E-value=5e-25 Score=204.31 Aligned_cols=239 Identities=25% Similarity=0.252 Sum_probs=174.8
Q ss_pred hHHHHHHHHHHHHHHcCCC----CCCcCEEEEEeeCC-CC---------------------CCCHHHHHHHHcCCCcc--
Q 047978 56 VPKLGKEAVSKAIKEWGQP----ISKITHLISCSVSG-VD---------------------MPGADYQLTKLLGLKPS-- 107 (320)
Q Consensus 56 ~~~la~~Aa~~aL~~ag~~----~~dId~li~~s~t~-~~---------------------~p~~a~~l~~~LGl~~~-- 107 (320)
..+|++.|+++||+++|++ +++||.||++++++ +. .|+.+.+|+..||++..
T Consensus 11 ~~~l~~~aa~~aL~~Ag~~~~~~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~g~~~ 90 (332)
T cd00825 11 VSILGFEAAERAIADAGLSREYQKNPIVGVVVGTGGGSPRFQVFGADAMRAVGPYVVTKAMFPGASGQIATPLGIHGPAY 90 (332)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCCEEEEEEeCCccHHHHhhhhccccccCcchhhcccchHHHHHHHHHhCCCCCcc
Confidence 6789999999999999999 99999999999877 43 78889999999999532
Q ss_pred ----hhhhhhh--------hhcCCCCeEEEEEeecccccccC----------CCC--CCchhhhhhhhhccCceEEEEee
Q 047978 108 ----VKRVMLT--------AESNAGARVLVVCSEITVGTFRA----------PSD--ENLSCLVNRAIVGDGTAALIVGA 163 (320)
Q Consensus 108 ----~c~~~l~--------l~~~~~~~~LVv~~e~~s~~~~~----------~~~--~~~~~~~~~~~~GDgAaA~ll~~ 163 (320)
.|++.+. ++++..+++||+++|..+..+.. |+. +..++....++|||||+|+||++
T Consensus 91 ~v~~~cas~~~al~~A~~~i~~g~~~~~Lv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gdGaaA~vL~~ 170 (332)
T cd00825 91 DVSAACAGSLHALSLAADAVQNGKQDIVLAGGSEELAAPMDCEFDAMGALSTPEKASRTFDAAADGFVFGDGAGALVVEE 170 (332)
T ss_pred ccccHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHhhccccCCCCCCCCCCCCCCCEEEEeeEEEEEECc
Confidence 2665543 78899999999999987642211 100 00112335789999999999998
Q ss_pred cCCC--CCCCCeeEEeccCceecCCCcccccccccccceechhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHHH
Q 047978 164 CPDI--NTERPLFHIVPTAQTILPDSEDAIKGHFRESPLIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQI 241 (320)
Q Consensus 164 ~~~~--~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~ 241 (320)
.+.. ........+...+....+.... ... ...+.+.+.++++|+++|++++|+ +++++|+.+.++.+.+
T Consensus 171 ~~~a~~~~~~~~~~i~~~~~~~~~~~~~----~~~---~~~~~~~~~i~~al~~agl~~~di--d~~~~h~~~~~~~~~~ 241 (332)
T cd00825 171 LEHALARGAHIYAEIVGTAATIDGAGMG----AFA---PSAEGLARAAKEALAVAGLTVWDI--DYLVAHGTGTPIGDVK 241 (332)
T ss_pred HHHHHHCCCeEEEEEEEEEEccCCCCCC----CCC---cCHHHHHHHHHHHHHHcCCCHhHC--CEEEccCCCCCCCCHH
Confidence 6542 1111123333322111111110 011 124677889999999999999997 4999999999999998
Q ss_pred HHHcCCCcch----hhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCC-------------------------CCCC
Q 047978 242 EGKLGLEKTK----LRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKAT-------------------------TGEE 292 (320)
Q Consensus 242 ~~~lg~~~e~----~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~-------------------------~G~~ 292 (320)
.+.++.+.++ ...+ +..+|||+++|+.++.|..+++. .+.+ +|
T Consensus 242 e~~~~~~~~~~~~~~~~~--~~~~~G~~~aas~~~~l~~~~~~----~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-- 313 (332)
T cd00825 242 ELKLLRSEFGDKSPAVSA--TKAMTGNLSSAAVVLAVDEAVLM----LEHGFIPPSIHIEELDEAGLNIVTETTPREL-- 313 (332)
T ss_pred HHHHHHHHhCCCCceeEC--CCcccccchhHhHHHHHHHHHHH----HhcCccCCCCCCCCCCcccCcccCCCCCCCC--
Confidence 8888776554 1222 58899999999999999999886 3333 55
Q ss_pred CceEEEEeeccchhhhheee
Q 047978 293 LEWGVLLGFEAGLTVEAIVL 312 (320)
Q Consensus 293 ~d~vll~~~G~G~~~~a~~l 312 (320)
+++++.++|.|.+++++++
T Consensus 314 -~~~l~~~~G~Gg~~~~~vl 332 (332)
T cd00825 314 -RTALLNGFGLGGTNATLVL 332 (332)
T ss_pred -CEEEEeeecCCCeeEEEeC
Confidence 9999999999999999875
No 37
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....
Probab=99.92 E-value=1.6e-24 Score=187.14 Aligned_cols=159 Identities=39% Similarity=0.615 Sum_probs=120.8
Q ss_pred cceEEccccccCCCcccccccHHHHHhhhcCCch-------h------HHHHHHHHHh----------------------
Q 047978 5 GKFQETQRPQANPANCVYQTDYPDFYFRITSSNH-------M------TELKEKFKRM---------------------- 49 (320)
Q Consensus 5 ~~~~I~a~~~~lP~~~i~~~e~~~~~~~~~~~~~-------~------~gi~~~~r~~---------------------- 49 (320)
+...|.|+|+.+|+++++++|+.+.+++....+. + +||.. ||.
T Consensus 13 g~A~Il~IgTA~P~~~~~Q~~~~e~~~~~~~~~~~~~~~~~l~ri~~~sgI~~--R~~vl~~~~~~~~p~~~~~~~ps~~ 90 (226)
T PF00195_consen 13 GPAYILSIGTAVPPHRITQEEIAEFFFRITHSDDLPDLRRKLRRIFENSGIEK--RHSVLPEEWLDEYPSFWDFADPSLA 90 (226)
T ss_dssp SSEEEEEEEEE-SSEEEEGCCHHHHHHHHTT-TTGHHHHHHHHHHHHHST-SE--EEESS-HHHHHTSGGGHSSSSS-HH
T ss_pred CCeEEEEEEEeCCCceecHHHHHHHHHHHhcccchhHHHHHHHhhhhccccce--eccccchhhhhcCcchhhccCccHH
Confidence 3589999999999999999999987633321111 1 12222 111
Q ss_pred ---hhcccchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcch---------hhhhhh---
Q 047978 50 ---YILVPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPSV---------KRVMLT--- 114 (320)
Q Consensus 50 ---~~~~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~~---------c~~~l~--- 114 (320)
..+.+...+|+.+|+++||+++|++++|||+||++|||++..|+...+|.++|||++.+ |.+-+.
T Consensus 91 ~R~~~~~~~a~~L~~~Aa~~AL~~~g~~~~dIthlv~vs~TG~~~PglD~~l~~~LgL~~~v~R~~i~~~GC~gg~~~L~ 170 (226)
T PF00195_consen 91 ERNALYAEEAPPLAEEAARKALAEAGLDPSDITHLVTVSCTGIAAPGLDARLINRLGLRPDVQRTPIFGMGCAGGAAGLR 170 (226)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTS-GGGECEEEEEESSSSECS-HHHHHHHHHT--TTSEEEEEES-GGGHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCcccceEEEEecCCcCCCchhHHHHhcCCCCCCcEEEEEeccchhhHHHHHH
Confidence 12235678999999999999999999999999999999999999999999999999975 654322
Q ss_pred -----hhcCCCCeEEEEEeecccccccCCCCCCchhhhhhhhhccCceEEEEeecC
Q 047978 115 -----AESNAGARVLVVCSEITVGTFRAPSDENLSCLVNRAIVGDGTAALIVGACP 165 (320)
Q Consensus 115 -----l~~~~~~~~LVv~~e~~s~~~~~~~~~~~~~~~~~~~~GDgAaA~ll~~~~ 165 (320)
+++++..+|||||.|.+|-+|..|.+.++++.+...+|||||+|+||+.+|
T Consensus 171 ~A~~~~~~~p~a~VLvv~vElcsl~~~~~~~~~~~~lv~~aLFgDGaAA~vv~~dP 226 (226)
T PF00195_consen 171 RAKDIARANPGARVLVVCVELCSLHFQAPNDDSLDNLVANALFGDGAAAVVVGADP 226 (226)
T ss_dssp HHHHHHHHSTT-EEEEEEEEEGGGTHHHCCTTSHHHHHHHHHB-EEEEEEEEESS-
T ss_pred HHHHHHhCCccceEEEEEEEeeEEEEecCCcccHHHHhHHhhhcCCceEEEEccCC
Confidence 567899999999999999878766667788899999999999999998765
No 38
>PF02797 Chal_sti_synt_C: Chalcone and stilbene synthases, C-terminal domain; InterPro: IPR012328 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyze the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group []. This domain of chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in the N-terminal domain. ; GO: 0016746 transferase activity, transferring acyl groups; PDB: 3OV2_A 3OV3_B 1Z1F_A 1Z1E_A 3ALE_C 3OIT_A 2H84_A 1TEE_D 1TED_A 2P0U_A ....
Probab=99.89 E-value=8.6e-23 Score=166.82 Aligned_cols=140 Identities=49% Similarity=0.862 Sum_probs=111.1
Q ss_pred EEeccCceecCCCcccccccccccc-----------eechhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHHHHH
Q 047978 175 HIVPTAQTILPDSEDAIKGHFRESP-----------LIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEG 243 (320)
Q Consensus 175 ~~~~~~~~~~p~~~~~~~~~~~~~g-----------~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~~ 243 (320)
++++..+..+|++++.+.|.+.+.| ++.+.++.+++.+|++++++..| +.+|++|+++++|++.+++
T Consensus 1 el~~~~~~~iP~te~~m~~~i~~~Gf~~~Ls~~vP~~i~~~i~~~~~~~L~~~g~~~~~--~~~wavHPGG~~ILd~v~~ 78 (151)
T PF02797_consen 1 ELVSTSSHLIPDTEDAMGWDIGDTGFHFILSKEVPDLISDNIPPFVEDLLARHGLSDWD--ILFWAVHPGGRKILDAVEE 78 (151)
T ss_dssp EEEEEEEEE-TT-TTSEEEEEETTEEEEEE-TTHHHHHHHHHHHHHHHHHHGGTCCSGG--GSEEEEE-SSHHHHHHHHH
T ss_pred CceeccceEecCCcCceEEEEeCCeEEEEEhhHhHHHHHHHHHHHHHHHHhhhcccccc--cceeeecCChHHHHHHHHH
Confidence 3556667789999999999999888 22345566667788888887433 2489999999999999999
Q ss_pred HcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCCCCCCceEEEEeeccchhhhheeeeecc
Q 047978 244 KLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEAIVLRSIP 316 (320)
Q Consensus 244 ~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~~l~~~~ 316 (320)
.|+++++++..+|+++++||||+|+++++.|+++++...++|...+|+|.+++++++||+|+++++++||..|
T Consensus 79 ~L~L~~~~l~~Sr~vLr~yGNmSSaTVlfVL~~~~~~~~~~g~~~~~~g~~~gv~~afGPG~t~E~~lLr~~~ 151 (151)
T PF02797_consen 79 ALGLSPEQLRASREVLREYGNMSSATVLFVLERMRRKSAEEGAPPPGEGGEWGVMLAFGPGLTIEGMLLRSVP 151 (151)
T ss_dssp HHTS-GGGGHHHHHHHHHH-B-GGGHHHHHHHHHHHHHHHTTTSBTTTTBSEEEEEEEETTTEEEEEEEEE-B
T ss_pred HcCCCHHHHHHHHHHHHhcCCCCCcchHHHHHHHHhhhhhhcccCCCCCCCeEEEEEECCcceEeeEEEeeCC
Confidence 9999999999999999999999999999999999984444466666555699999999999999999999876
No 39
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2.3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....
Probab=99.87 E-value=2.7e-22 Score=150.86 Aligned_cols=90 Identities=30% Similarity=0.540 Sum_probs=78.4
Q ss_pred hhhcCCCCCCCCceEEEEcCCChhHHHHHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCCCCC
Q 047978 213 FDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEE 292 (320)
Q Consensus 213 l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~ 292 (320)
|+++|++++|+ +++++||+|.++++.+.+.+|+|+++++.+ +++|||+++||+|++|++++++ |+++||
T Consensus 1 L~~~g~~~~di--d~~i~hq~~~~~~~~~~~~lgi~~~~~~~~---~~~~Gn~~sa~~~~~L~~~~~~----g~~~~G-- 69 (90)
T PF08541_consen 1 LERAGLSPDDI--DHFIPHQASKKILDSIAKRLGIPPERFPDN---LAEYGNTGSASIPINLADALEE----GRIKPG-- 69 (90)
T ss_dssp HHHTT--GGGE--SEEEE-SSSHHHHHHHHHHHTS-GGGBE-T---HHHH-B-GGGHHHHHHHHHHHT----TSSCTT--
T ss_pred CccccCCHHHC--CEEEeCCCCHHHHHHHHHHcCCcHHHHHHH---HhccCcchhhhHHHHHHHHHHc----CCCCCC--
Confidence 68899999996 399999999999999999999999999885 8999999999999999999999 999999
Q ss_pred CceEEEEeeccchhhhheeeee
Q 047978 293 LEWGVLLGFEAGLTVEAIVLRS 314 (320)
Q Consensus 293 ~d~vll~~~G~G~~~~a~~l~~ 314 (320)
|+++++++|+|++++++++||
T Consensus 70 -d~vl~~~~G~G~~~~~~~~~~ 90 (90)
T PF08541_consen 70 -DRVLLVGFGAGFSWGAAVLRW 90 (90)
T ss_dssp -EEEEEEEEETTTEEEEEEEE-
T ss_pred -CEEEEEEEEhhheeEEEEEEC
Confidence 999999999999999999997
No 40
>PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase. Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the N-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1X9E_B 2HDB_B 2WYA_C 2P8U_A 3V4X_A 3V4N_C 3LEH_A 1TXT_D 1TVZ_A 2FA0_A ....
Probab=99.74 E-value=8e-19 Score=144.58 Aligned_cols=149 Identities=17% Similarity=0.157 Sum_probs=108.5
Q ss_pred cceEEccccccCCCcccccccHHHHHhhhcCCch-hHHHHHHHHHhhhcccchHHHHHHHHHHHHHHcCCCCCCcCEEEE
Q 047978 5 GKFQETQRPQANPANCVYQTDYPDFYFRITSSNH-MTELKEKFKRMYILVPKVPKLGKEAVSKAIKEWGQPISKITHLIS 83 (320)
Q Consensus 5 ~~~~I~a~~~~lP~~~i~~~e~~~~~~~~~~~~~-~~gi~~~~r~~~~~~e~~~~la~~Aa~~aL~~ag~~~~dId~li~ 83 (320)
++|+|.+++.|+|+..++.+|+++.. +.+.+. ..|++++.+.++.++|++.+||+.|++++|++.+++|++|++|++
T Consensus 3 ~~VGI~~i~~y~p~~~v~~~~La~~~--g~d~~K~~~glgq~~~av~~~~ED~vTmA~nAa~~ll~~~~id~~~Ig~l~v 80 (174)
T PF01154_consen 3 QNVGIDAIEFYIPRYYVDQEELAEAR--GVDPGKYTIGLGQEKMAVPPPDEDIVTMAANAAKPLLDRYNIDPDDIGRLIV 80 (174)
T ss_dssp SSEEEEEEEEE-ESEEEEHHHHHHHT--TS-TCHHHTTT--SEEEE--TTS-HHHHHHHHHHTTHHHHT-HHHHEEEEEE
T ss_pred ccccEeEEEEecCceEecHHHHHHHh--CCCHHHhhhhcCeeEEEeCCCcccHHHHHHHHHHHHHHHcCCCHHHccEEEE
Confidence 47999999999999999999999886 444444 458887546777889999999999999999999999999999999
Q ss_pred EeeCC-CCCCCHHHHHHHHcCCCcc----------hhhh----hhh----hhcC--CCCeEEEEEeecccccccCCCCCC
Q 047978 84 CSVSG-VDMPGADYQLTKLLGLKPS----------VKRV----MLT----AESN--AGARVLVVCSEITVGTFRAPSDEN 142 (320)
Q Consensus 84 ~s~t~-~~~p~~a~~l~~~LGl~~~----------~c~~----~l~----l~~~--~~~~~LVv~~e~~s~~~~~~~~~~ 142 (320)
+|.|. +...+.+.+|++.||++.. .|-+ +.. ++++ +.+++|||++|.... .+..
T Consensus 81 gTES~vD~sKs~~t~v~~ll~~s~~~~~~~~e~k~ACygGTaAL~~a~~~v~s~~~~g~~aLVVasDiA~y---~~g~-- 155 (174)
T PF01154_consen 81 GTESGVDKSKSISTYVHQLLGLSGNPDCRGVEMKQACYGGTAALQNAVNWVASSPWDGRKALVVASDIARY---DLGS-- 155 (174)
T ss_dssp E-SS-SBSSS-HHHHHHHHTTTTT-SSSEEEEEESGGGHHHHHHHHHHHHHCSTTSTTEEEEEEEEEEE-----STTT--
T ss_pred eccccccccccHHHHHHHHhCcCCCCceeeeehhhhhHHHHHHHHHHHHHHhcCCCCCCeEEEEecccccc---CCCC--
Confidence 99999 8999999999999999532 2432 111 5543 578999999998853 1111
Q ss_pred chhhhhhhhhccCceEEEEeecC
Q 047978 143 LSCLVNRAIVGDGTAALIVGACP 165 (320)
Q Consensus 143 ~~~~~~~~~~GDgAaA~ll~~~~ 165 (320)
....-|-||+|+||+++.
T Consensus 156 -----~e~TqGAGAVAmLi~~na 173 (174)
T PF01154_consen 156 -----AEPTQGAGAVAMLIGPNA 173 (174)
T ss_dssp -----TGGG-EEEEEEEEEECS-
T ss_pred -----ccccccceeEEEEecCCC
Confidence 135569999999999864
No 41
>KOG1393 consensus Hydroxymethylglutaryl-CoA synthase [Lipid transport and metabolism]
Probab=99.72 E-value=4.7e-17 Score=146.27 Aligned_cols=288 Identities=17% Similarity=0.126 Sum_probs=188.9
Q ss_pred ceEEccccccCCCcccccccHHHHHhhhcC-CchhHHHHHHHHHhhhcccchHHHHHHHHHHHHHHcCCCCCCcCEEEEE
Q 047978 6 KFQETQRPQANPANCVYQTDYPDFYFRITS-SNHMTELKEKFKRMYILVPKVPKLGKEAVSKAIKEWGQPISKITHLISC 84 (320)
Q Consensus 6 ~~~I~a~~~~lP~~~i~~~e~~~~~~~~~~-~~~~~gi~~~~r~~~~~~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~ 84 (320)
+++|.++..|+|.+.++++|+++.. +.+ .+.-.|+++....++...|+...|+..+.++++++.+++++.|+.|-++
T Consensus 11 dvGI~aieiyfP~~yV~Q~elEk~d--~vs~gKytIGLGq~~MgfcsdrEDi~Sl~ltvvs~Lmery~i~~~~IGRLEVG 88 (462)
T KOG1393|consen 11 DVGIIAIEIYFPSQYVDQEELEKFD--GVSAGKYTIGLGQTQMGFCSDREDIISLSLTVVSRLMERYNIDPDSIGRLEVG 88 (462)
T ss_pred ccceeEEEEEcCccccChhhHhhcC--CccccceEeccCcceecccCchhhhhhhhHHHHHHHHHHhCCChhhcceEEec
Confidence 6999999999999999999998764 222 2334577775566777789999999999999999999999999999999
Q ss_pred eeCC-CCCCCHHHHHHHHcCCCc--c--------hhhh----hhh----hh--cCCCCeEEEEEeecccccccCCCCCCc
Q 047978 85 SVSG-VDMPGADYQLTKLLGLKP--S--------VKRV----MLT----AE--SNAGARVLVVCSEITVGTFRAPSDENL 143 (320)
Q Consensus 85 s~t~-~~~p~~a~~l~~~LGl~~--~--------~c~~----~l~----l~--~~~~~~~LVv~~e~~s~~~~~~~~~~~ 143 (320)
|.|- +-..+.-..|...++-.. + +|-| .+. ++ +..++.+||||+|..-. +..
T Consensus 89 TETiiDKSKSVKt~LMqLF~~sgNtdIEGiDttnACYGGtaALfnavnWiESssWDGr~aivV~gDIAvY----~~G--- 161 (462)
T KOG1393|consen 89 TETIIDKSKSVKTVLMQLFEESGNTDIEGIDTTNACYGGTAALFNAVNWIESSSWDGRYAIVVCGDIAVY----AKG--- 161 (462)
T ss_pred ceeccccchHHHHHHHHHhhhcCCCccccccccccccccHHHHHHHhhhhhhcccCCceeEEEEeeEEEe----cCC---
Confidence 9998 888888788888776222 2 2532 111 43 47799999999998753 111
Q ss_pred hhhhhhhhhccCceEEEEeecCCCCCCCCeeE---EeccCceecCCCcccccccccccc-eechhHHHHHHHH-------
Q 047978 144 SCLVNRAIVGDGTAALIVGACPDINTERPLFH---IVPTAQTILPDSEDAIKGHFRESP-LIADNIDKFLAES------- 212 (320)
Q Consensus 144 ~~~~~~~~~GDgAaA~ll~~~~~~~~~~~~~~---~~~~~~~~~p~~~~~~~~~~~~~g-~~~~~~~~~i~~~------- 212 (320)
..+.++ |-||+|+|++++.+-.+++ .++ +-.......|+- ...+...+| +....+..+++.+
T Consensus 162 ~aRpTG---GAgAVAmLIgPnApi~fer-glr~thM~hayDFyKPdl---~SEyPvVDGklSi~cYl~Ald~cY~~~~kK 234 (462)
T KOG1393|consen 162 NARPTG---GAGAVAMLIGPNAPIIFER-GLRATHMQHAYDFYKPDL---LSEYPVVDGKLSIQCYLSALDRCYTVYRKK 234 (462)
T ss_pred CCCCCC---CcceEEEEEcCCCceEecc-cchhhhhhhhhhccCCCC---CCcCceecCeehHHHHHHHHHHHHHHHHHH
Confidence 113334 9999999999887643222 111 111111223421 111233344 2222222222221
Q ss_pred -hh----hcCCCCCCCCceEEEEcCCChhHHHHHHHHcC-----------------------------------------
Q 047978 213 -FD----QVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLG----------------------------------------- 246 (320)
Q Consensus 213 -l~----~~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg----------------------------------------- 246 (320)
-+ .-+..++++ +++|+|.|.-++.++-..+|-
T Consensus 235 ~~~~~~~~~~~~l~~f--dy~ifHsP~cKlvqKs~arl~ynDf~~~~~~~~~~~~~~~~~~l~~s~~dr~~ek~~~~~s~ 312 (462)
T KOG1393|consen 235 IAAQWQKSGSDNLNSF--DYIIFHSPYCKLVQKSLARLLYNDFLLNPSQLPESAGLESTLKLDESYTDRDLEKAFIKISK 312 (462)
T ss_pred HHHHhccccCcccccC--CeEEEeCchhhhHHHHHHHhhhhhhhhccccccccccccccccccccccchHHHHHHHHHhH
Confidence 11 123444454 389999998877665222110
Q ss_pred -CCcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCCCCCCceEEEEeeccchhhhheeeeecc
Q 047978 247 -LEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEAIVLRSIP 316 (320)
Q Consensus 247 -~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~~l~~~~ 316 (320)
+-.+|+..+.-.-.+.||+.++|+...|..++..... .--.| ++|.++|+|+|.+.+...+|+.+
T Consensus 313 ~~~~~Kt~~sl~~~~~~GNmYTaSly~~l~sll~~~~~--d~l~G---krig~FSYGSGlAAs~fs~~v~~ 378 (462)
T KOG1393|consen 313 PIFKKKTKPSLLAPRRNGNMYTASLYASLASLLSAVPA--DELAG---KRIGMFSYGSGLAASMFSLRVTQ 378 (462)
T ss_pred HHHHhhccceeEeeccCCccccHHHHHHHHHHHhccch--hhhhc---cEEEEEeecCcchhheEEEEecC
Confidence 1112222222223478999999999999999987211 22356 89999999999999999888865
No 42
>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane
Probab=99.72 E-value=7.4e-17 Score=143.26 Aligned_cols=159 Identities=14% Similarity=0.152 Sum_probs=121.7
Q ss_pred cceEEccccccCCCc--ccccccHHHHHhhh--cCCc---hh------HHHHHHHHHhhh--------------cccchH
Q 047978 5 GKFQETQRPQANPAN--CVYQTDYPDFYFRI--TSSN---HM------TELKEKFKRMYI--------------LVPKVP 57 (320)
Q Consensus 5 ~~~~I~a~~~~lP~~--~i~~~e~~~~~~~~--~~~~---~~------~gi~~~~r~~~~--------------~~e~~~ 57 (320)
++|++.-.+.|-|+. +++.+.+.+..... .+++ ++ .|+++ +.+.+ ..+...
T Consensus 7 r~VYLvDfac~kP~~~~~v~~~~~~e~~~~~~~f~~~sl~F~~kIlerSGlG~--eTy~P~~~~~~p~~~s~~~a~~Eae 84 (290)
T PF08392_consen 7 RPVYLVDFACYKPPDELRVSREEFIEHARRCGRFDEESLDFQRKILERSGLGD--ETYLPPALHEIPPDPSLAAAREEAE 84 (290)
T ss_pred CCEEEEeeeecCCCcccccCHHHHHHHHHhcccCChhHHHHHHHHHHhcCCCc--cccCCcccccCCCcccHHHHHHHHH
Confidence 469999999999987 48888888865211 1222 22 23333 22221 123355
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcch---------hhh-hhh-------hhcCCC
Q 047978 58 KLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPSV---------KRV-MLT-------AESNAG 120 (320)
Q Consensus 58 ~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~~---------c~~-~l~-------l~~~~~ 120 (320)
.++..|++++|+++|++|+|||.||+.+++.++.|+.+++|.+++|++.++ |++ .+. ++..+.
T Consensus 85 ~v~f~av~~LL~ktgv~p~dIdiLVvncs~f~ptPSLsamIvnr~~mr~di~~~nLsGMGCsAgliai~lA~~lL~~~p~ 164 (290)
T PF08392_consen 85 MVIFGAVDDLLAKTGVKPSDIDILVVNCSLFNPTPSLSAMIVNRYGMRSDIKSYNLSGMGCSAGLIAIDLAKDLLQAHPN 164 (290)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEECcCCCcCCcHHHHHHHHhCCCcCeeeecccCCcchhhHHHHHHHHHHHHhCCC
Confidence 678999999999999999999999988888899999999999999999874 543 222 678889
Q ss_pred CeEEEEEeecccccccCCCCCCchhhhhhhhhccCceEEEEeecCCC
Q 047978 121 ARVLVVCSEITVGTFRAPSDENLSCLVNRAIVGDGTAALIVGACPDI 167 (320)
Q Consensus 121 ~~~LVv~~e~~s~~~~~~~~~~~~~~~~~~~~GDgAaA~ll~~~~~~ 167 (320)
.+||||+.|.++.+|+. ..++...++.++|+||++|+||++.+..
T Consensus 165 ~~ALVVstE~~s~~~Y~--G~~rsmlv~NcLFr~GgAAvLLSn~~~~ 209 (290)
T PF08392_consen 165 SYALVVSTENISANWYR--GNDRSMLVSNCLFRMGGAAVLLSNKPSD 209 (290)
T ss_pred cEEEEEEEeeccccccc--CCcHHHhhccccccCCceeEEeecCccc
Confidence 99999999999987753 3345667889999999999999998763
No 43
>TIGR02845 spore_V_AD stage V sporulation protein AD. Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.
Probab=99.71 E-value=6.7e-16 Score=138.98 Aligned_cols=234 Identities=14% Similarity=0.152 Sum_probs=147.4
Q ss_pred ccchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCc----chhhhhhh--------hhcCCC
Q 047978 53 VPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKP----SVKRVMLT--------AESNAG 120 (320)
Q Consensus 53 ~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~----~~c~~~l~--------l~~~~~ 120 (320)
+++..+|+.+|+++||+++|++++|||+||+++. +. .+..+..+++.||++. ..|+++++ +++|..
T Consensus 47 EkAe~eLa~eAa~~ALekAGL~~~DID~IIvGdl-~~-Q~~~As~vA~~LGIP~fdV~~ACSTf~~AL~lAa~lI~SG~a 124 (327)
T TIGR02845 47 EKAERKLMEDAVNLALKKANLKKDDVDFFLAGDL-LN-QIITANFVARDLGIPFLGLYGACSTSMETLALGAMLVDGGFA 124 (327)
T ss_pred chhHHHHHHHHHHHHHHHcCCCHHHCCEEEEeCC-CC-cccHHHHHHHHhCCCEEEEeccCHHHHHHHHHHHHHHhCCCC
Confidence 5677899999999999999999999999998873 41 3346889999999864 35888765 678999
Q ss_pred CeEEEEEeecccc---cccCCCCCCchhhhhhhhhccCceEEEEeecCCCCCCCCeeEEeccCceecCC-Cccccccccc
Q 047978 121 ARVLVVCSEITVG---TFRAPSDENLSCLVNRAIVGDGTAALIVGACPDINTERPLFHIVPTAQTILPD-SEDAIKGHFR 196 (320)
Q Consensus 121 ~~~LVv~~e~~s~---~~~~~~~~~~~~~~~~~~~GDgAaA~ll~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~ 196 (320)
++|||+++|..+. .|+-|.+.-.+++.+..+|||||+|+||++.+.. +...-.+.|.- ... -.++ ..
T Consensus 125 d~VLVV~Ssh~S~AErqfr~p~eyg~q~~~ta~~tgdGAGA~vl~~~~~~----~~i~~~t~gkv-~d~g~~d~----~n 195 (327)
T TIGR02845 125 DRVLAATSSHYATAERQFRYPTEYGVQKPPTAQWTVTGAGAVLLASTGGG----PRITSATIGKV-VDYGITDP----LD 195 (327)
T ss_pred CEEEEEEecccchhhhhcccccccccCCCCeeeEEEcccEEEEEeecCCC----CceEEEEEEEE-EecCCCCc----cc
Confidence 9999999999873 1333422111235578899999999999987643 12222221111 000 0111 11
Q ss_pred ccceechhHHHHHHHHhhhcCCCCCCCCceEEEEcC---CChhHHHHHHHHcCCCcchhhhh-------HHHHhccCCcc
Q 047978 197 ESPLIADNIDKFLAESFDQVSLNDHDWNSLFWMMHP---IGPAVLDQIEGKLGLEKTKLRET-------RHVLSEYGNMA 266 (320)
Q Consensus 197 ~~g~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~---~~~~~~~~~~~~lg~~~e~~~~~-------~~~~~~~Gn~~ 266 (320)
|..--...-..+|...|+..|.+++|+| .++.-- .+..++..+.++-|++.++.+.+ .+.--.-|-.|
T Consensus 196 mgaamapaa~dti~~h~~d~~~~~~~yd--~i~tgdlg~vg~~i~~~ll~~~g~~~~~~~~dcg~~iy~~~~~~~aggsg 273 (327)
T TIGR02845 196 MGAAMAPAAADTIEAHFKDTGRSVDDYD--LIVTGDLARVGSEILRKLLKERGYDVTERYDDCGVMIYRPDQQVFAGGSG 273 (327)
T ss_pred chhhhhHHHHHHHHHHHHHcCCChhhcc--EEEecchHHHHHHHHHHHHHHcCCChhhccccCCeEEEcCCCcccCCCcc
Confidence 1111123445677888999999999974 444433 45678888888888765432221 00000113334
Q ss_pred -cchHHHHHHHHHHhchhcCCCCCCCCCceEEEEeeccchh
Q 047978 267 -SATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLT 306 (320)
Q Consensus 267 -sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~ 306 (320)
++|-.+...++++. +++|++ .|||+++.|+=++
T Consensus 274 c~csa~v~~~~~~~~-~~~g~~------~r~l~v~tgalls 307 (327)
T TIGR02845 274 CACSAVVTYGHILKE-MLRGKL------KKVLVVATGALLS 307 (327)
T ss_pred cchhHHHHHHHHHHH-HhcCcc------eEEEEEEchhhcC
Confidence 34444455555554 222333 6799999887443
No 44
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=99.69 E-value=4e-16 Score=145.62 Aligned_cols=294 Identities=13% Similarity=0.031 Sum_probs=184.1
Q ss_pred cccceEEccccccCCCcc------------cccccHHHHHhhhcC-Cchh---HHHHHHHHHhhhcccchHHHHHHHHHH
Q 047978 3 LLGKFQETQRPQANPANC------------VYQTDYPDFYFRITS-SNHM---TELKEKFKRMYILVPKVPKLGKEAVSK 66 (320)
Q Consensus 3 ~~~~~~I~a~~~~lP~~~------------i~~~e~~~~~~~~~~-~~~~---~gi~~~~r~~~~~~e~~~~la~~Aa~~ 66 (320)
+++++.|++.|..-|=-. ++|.+....+ +.. .+|+ +++.. |++. .++...+|+..|+++
T Consensus 1 ~~~~v~I~~~g~vs~lG~~~~~~~aa~ragi~~~~~~~~~--~~~~~~~i~~~~~~~~--~~~~-~~~r~~~La~~Al~~ 75 (348)
T PRK06147 1 MMRALAIVGSGMVTAVGLDAPSSCAAIRARLDNFQETRFI--DPPGGEWLIGAPVPLP--PPWR-GPERLAEMAAPAIAE 75 (348)
T ss_pred CCCceEEEecceeecCcCCHHHHHHHHHcccccccccccc--cCCCCCceEeecCcCC--cccC-chHHHHHHHHHHHHH
Confidence 456788888888777543 3444333322 222 3453 34433 5553 456889999999999
Q ss_pred HHHHcC-CCCCCcCEEEEEee-----CC-CCCCCHHHHHHHHcCCCc-c-------hhhhhhh--------hhcCCCCeE
Q 047978 67 AIKEWG-QPISKITHLISCSV-----SG-VDMPGADYQLTKLLGLKP-S-------VKRVMLT--------AESNAGARV 123 (320)
Q Consensus 67 aL~~ag-~~~~dId~li~~s~-----t~-~~~p~~a~~l~~~LGl~~-~-------~c~~~l~--------l~~~~~~~~ 123 (320)
+|++++ .++++||++|..+. ++ +..|..+..++++||+.. . .|+++++ |+++..+.+
T Consensus 76 aL~~a~~~~~~~i~lil~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~~~~~~~i~~~casg~~Al~~A~~~i~~G~~~~~ 155 (348)
T PRK06147 76 ALEGLPALDASEAPLLLCVAEEERPGRPPDLEERLLRELEARLGLRLEPGSAVIARGRVSGAVALAQARRLIAAGGCPRV 155 (348)
T ss_pred HHHhcccccccCCcEEEEeCchhcCCCCcchHHHHHHHHHHHhCCCCCCCcccccccchHHHHHHHHHHHHHHcCCCCEE
Confidence 999999 79999999988654 22 445567889999999843 1 2555433 778999999
Q ss_pred EEEEeecccccc-cCC---CCC-CchhhhhhhhhccCceEEEEeecCCCCCCCCeeEEeccCceecCCCccccccccccc
Q 047978 124 LVVCSEITVGTF-RAP---SDE-NLSCLVNRAIVGDGTAALIVGACPDINTERPLFHIVPTAQTILPDSEDAIKGHFRES 198 (320)
Q Consensus 124 LVv~~e~~s~~~-~~~---~~~-~~~~~~~~~~~GDgAaA~ll~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 198 (320)
||+++|..+... ..+ ..+ ...+..++++|||||+++||++.+...-. ...+...+....++.... ......+
T Consensus 156 lvgg~d~~~~~~~~~~~~~~~~l~~~~~~~G~v~GEGA~a~vLe~~~~A~~r--ga~i~a~g~~~~~~~~~~-~~~~p~~ 232 (348)
T PRK06147 156 LVAGVDSLLTGPTLAHYEARDRLLTSQNSNGFIPGEAAAAVLLGRPAGGEAP--GLPLLGLGLGREPAPVGE-SEDLPLR 232 (348)
T ss_pred EEEeeccccCHHHHHHHHHhhccCCCCCCCceeeeceEEEEEEccHhhhhcC--CCceEEEEEeecCCCccc-CCCCCCC
Confidence 999999875410 000 000 00112358899999999999986542100 112221111111111000 0000012
Q ss_pred ceechhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHH-----HHHHcCCCcchhhhhHHHHhccCCcccchHHHH
Q 047978 199 PLIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQ-----IEGKLGLEKTKLRETRHVLSEYGNMASATVLFV 273 (320)
Q Consensus 199 g~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~-----~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~ 273 (320)
.+.+.+.++.+|+++|++++|| .++..|..+....+. +.+.++-..+....+ ..-..+||+++|+-.+.
T Consensus 233 ---g~gl~~ai~~AL~~agl~~~dI--d~v~ah~~gt~~~d~~e~~A~~~~f~~~~~~~~~~-~~k~~~Gh~~aAaG~~~ 306 (348)
T PRK06147 233 ---GDGLTQAIRAALAEAGCGLEDM--DYRIADLNGEQYRFKEAALAEMRLFRVRKEFFDLW-HPAECIGEIGAAIGPAL 306 (348)
T ss_pred ---hHHHHHHHHHHHHHcCCCHHHC--CEEEcCCCCCccchHHHHHHHHHHhhhccCCCcee-cchHhhcchHHHHHHHH
Confidence 3667899999999999999996 388999876554332 233454322222111 14677999999999998
Q ss_pred HHHHHHhchhcCCCCCCCCCceEEEEeeccchhhhheeeeec
Q 047978 274 LDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEAIVLRSI 315 (320)
Q Consensus 274 L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~~l~~~ 315 (320)
+...+.... +| .-|| +++|+++..-...-++++++..
T Consensus 307 ~~~a~~~~~-~g-~~~g---~~~L~~s~~d~g~r~a~~l~~~ 343 (348)
T PRK06147 307 LGVALAASR-KG-YGPG---PNVLCHLSDDDGARAALVLEYR 343 (348)
T ss_pred HHHHHHHHH-cC-cCCC---CcEEEEecCCCCceEEEEEecc
Confidence 887654321 14 4467 8999999998888899999865
No 45
>PRK08304 stage V sporulation protein AD; Validated
Probab=99.64 E-value=1e-14 Score=131.62 Aligned_cols=234 Identities=14% Similarity=0.155 Sum_probs=150.6
Q ss_pred cccchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCc----chhhhhhh--------hhcCC
Q 047978 52 LVPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKP----SVKRVMLT--------AESNA 119 (320)
Q Consensus 52 ~~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~----~~c~~~l~--------l~~~~ 119 (320)
++++..+|+.+|+++||+++|++++|||++|+++...+ +..+..+++.||++- ..|+++++ ++++.
T Consensus 52 wEkAeseLa~eAa~~ALekAGI~~~DID~lI~Gdll~Q--~~sAs~vA~~LGIPa~dV~gACST~~~AL~lAa~lI~SG~ 129 (337)
T PRK08304 52 WEKAERKMMEDAIQQALQKANLKKSDIDYLLAGDLLNQ--IISANFAARELGIPFLGLYGACSTMMESLALGSMLIDGGF 129 (337)
T ss_pred ccccHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCC--cchHHHHHHHhCCcEEEEeccCHHHHHHHHHHHHHHhcCC
Confidence 35677899999999999999999999999998875333 356889999999853 25887755 67899
Q ss_pred CCeEEEEEeeccccc---ccCCCCCCchhhhhhhhhccCceEEEEeecCCCCCCCCeeEEeccCceecCC-Ccccccccc
Q 047978 120 GARVLVVCSEITVGT---FRAPSDENLSCLVNRAIVGDGTAALIVGACPDINTERPLFHIVPTAQTILPD-SEDAIKGHF 195 (320)
Q Consensus 120 ~~~~LVv~~e~~s~~---~~~~~~~~~~~~~~~~~~GDgAaA~ll~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~ 195 (320)
.++|||++++..+.. |+.|.+.-.+...+...++|||+|+||++++.. +.....+.|.- ... -.++ .
T Consensus 130 ad~VLVV~Ssh~s~aerqfr~P~eyg~qrp~taqwtvtGAGA~i~~~~~~~----~~i~~~t~Gkv-~D~g~~d~----~ 200 (337)
T PRK08304 130 ADRVLAATSSHFATAERQFRFPTEYGGQRPPTAQWTVTGAGAVLLSREGSG----PRITHATIGKV-VDLGIKDP----N 200 (337)
T ss_pred CCEEEEEEcchhhhhhhhccCchhccccCCCcceEEeeccEEEEEecCCCC----ceEEEEeEEEE-EecCCCCc----c
Confidence 999999999999863 666654333334567889999999999987643 22222221111 110 0111 1
Q ss_pred cccceechhHHHHHHHHhhhcCCCCCCCCceEEEEcC---CChhHHHHHHHHcCCCcchhhhh---------HHHHhccC
Q 047978 196 RESPLIADNIDKFLAESFDQVSLNDHDWNSLFWMMHP---IGPAVLDQIEGKLGLEKTKLRET---------RHVLSEYG 263 (320)
Q Consensus 196 ~~~g~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~---~~~~~~~~~~~~lg~~~e~~~~~---------~~~~~~~G 263 (320)
.|..--...-..+|...|+..|.+++|+| .++.-- .+..++..+.++-|++.++.+.+ ..... -|
T Consensus 201 nmgaaMapAa~dti~~h~~d~~~~~~~yD--li~tGDlg~vG~~i~~~ll~~~g~~~~~~~~DcG~~iy~~~~q~~~-aG 277 (337)
T PRK08304 201 DMGAAMAPAAADTIQQHFKDTGRSPEDYD--LIVTGDLGRVGREILKELLKEEGYDIGDNYNDCGLMIYDSEQQDVF-AG 277 (337)
T ss_pred cchhhhhHHHHHHHHHHHHHcCCChhhcc--EEEEcchHHHHHHHHHHHHHHhCCChhhcccccCeEEeccCCCccc-CC
Confidence 11111123445677888999999999984 444433 45678888888888775432221 00011 13
Q ss_pred Ccc-cchHHHHHHHHHHhchhcCCCCCCCCCceEEEEeeccchh
Q 047978 264 NMA-SATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLT 306 (320)
Q Consensus 264 n~~-sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~ 306 (320)
-.| ++|-.+...++++. +++|++ .|||+++.|+=++
T Consensus 278 gSGc~csa~v~~~~~~~~-~~~g~~------~rvl~v~tGaLls 314 (337)
T PRK08304 278 GSGCACSAVVTYGYLLKE-LQKGKL------KRVLVVATGALLS 314 (337)
T ss_pred CcccchhHHHHHHHHHHH-HhcCCc------eEEEEEEchhhcC
Confidence 344 34445555555554 222433 6799999887443
No 46
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=99.43 E-value=3.8e-12 Score=120.64 Aligned_cols=240 Identities=16% Similarity=0.100 Sum_probs=155.8
Q ss_pred cccchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCC-CCCCCHHHHHHHHcCCCc-c-------hhhhhhh--------
Q 047978 52 LVPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSG-VDMPGADYQLTKLLGLKP-S-------VKRVMLT-------- 114 (320)
Q Consensus 52 ~~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~-~~~p~~a~~l~~~LGl~~-~-------~c~~~l~-------- 114 (320)
.+++..+|+.+|+++||+++|++++|||.||++++++ +..|..+..++..||+++ . .|+++++
T Consensus 18 ~~~~~~~La~~A~~~AL~dAgl~~~dID~vi~~~~~~~~~~~~~a~~v~~~lGl~~~~~~~~v~~~c~s~~~al~~A~~~ 97 (386)
T cd00751 18 KDVSADDLGAAVIKALLERAGLDPEEVDDVIMGNVLQAGEGQNPARQAALLAGLPESVPATTVNRVCGSGLQAVALAAQS 97 (386)
T ss_pred CCCCHHHHHHHHHHHHHHhcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCchhhhccccHHHHHHHHHHHHH
Confidence 3688999999999999999999999999999988877 567777888999999975 2 2666543
Q ss_pred hhcCCCCeEEEEEeecccccc-----------cC--------CC---C---CC----------------ch--------h
Q 047978 115 AESNAGARVLVVCSEITVGTF-----------RA--------PS---D---EN----------------LS--------C 145 (320)
Q Consensus 115 l~~~~~~~~LVv~~e~~s~~~-----------~~--------~~---~---~~----------------~~--------~ 145 (320)
+++|..++|||+++|..|..- .. |. + .. ++ .
T Consensus 98 I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~~~~~yg~tre~la~vav~~ 177 (386)
T cd00751 98 IAAGEADVVVAGGVESMSRAPYLLPKARRGGRLGLNTLDGMLDDGLTDPFTGLSMGITAENVAEKYGISREEQDEFALRS 177 (386)
T ss_pred HHCCCCCeEEEeeeeccccCcccccccccccccCccccccccccccccccCCCCHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 778999999999999764210 00 00 0 00 00 0
Q ss_pred -------h-----------------------------------------------------hhhhhhccCceEEEEeecC
Q 047978 146 -------L-----------------------------------------------------VNRAIVGDGTAALIVGACP 165 (320)
Q Consensus 146 -------~-----------------------------------------------------~~~~~~GDgAaA~ll~~~~ 165 (320)
. ...+.++|||+|+||.+++
T Consensus 178 ~~~a~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~a~~r~~~t~e~v~~s~~i~~p~g~l~~~d~~~~~dGaaavvl~s~~ 257 (386)
T cd00751 178 HQRAAAAQEAGRFKDEIVPVEVPGRKGPVVVDRDEGPRPDTTLEKLAKLKPAFKKDGTVTAGNASGINDGAAAVLLMSEE 257 (386)
T ss_pred HHHHHHHHHcCCCcCeEEEEEeccCCCCeEeCCCCCCCCCCCHHHHhCCCCCcCCCCcEeCCcCCCCCcceEEEEEecHH
Confidence 0 0012346888888888765
Q ss_pred CC-CC-CCCeeEEeccCceecCCCcccccccccccceechhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHHHHH
Q 047978 166 DI-NT-ERPLFHIVPTAQTILPDSEDAIKGHFRESPLIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEG 243 (320)
Q Consensus 166 ~~-~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~~ 243 (320)
.. .. .++...+...+.... .. . .........++.+++++|++++|+| ++-+|-......-...+
T Consensus 258 ~a~~~~~~~~~~I~g~~~~~~--~~-----~-----~~~~~~~~a~~~a~~~Agi~~~did--~~e~~d~f~~~~~~~~e 323 (386)
T cd00751 258 KAKELGLKPLARIVGYAVAGV--DP-----A-----IMGIGPVPAIPKALKRAGLTLDDID--LIEINEAFAAQALACLK 323 (386)
T ss_pred HHHHCCCCeeEEEEEEEEccC--CC-----c-----ccchhHHHHHHHHHHHcCCCHHHcC--EEEeechhHHHHHHHHH
Confidence 32 11 112123333221110 00 0 0122335788999999999999973 77888776555555678
Q ss_pred HcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCCCCCCceEEEEeeccchhhhheeee
Q 047978 244 KLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEAIVLR 313 (320)
Q Consensus 244 ~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~~l~ 313 (320)
.||+.+..+-.+ --.-.+||...|+=...+.+++.+.. |+ .+ .+.|....|+|...++++++
T Consensus 324 ~lg~~~~pvn~~-GG~l~~Gh~~gasG~~~~~e~~~qL~--g~--~~---~~gl~~~~~~gg~g~~~~ie 385 (386)
T cd00751 324 ELGLDPEKVNVN-GGAIALGHPLGASGARIVVTLLHELK--RR--GG---RYGLATMCIGGGQGAAMVIE 385 (386)
T ss_pred HhCCChhhcCCC-cchHhhCccHHHHHHHHHHHHHHHHH--hc--CC---CEEEEEEcccccceEEEEEE
Confidence 899865443322 11335799999988888888877633 21 23 56777777777776777765
No 47
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=99.43 E-value=5.4e-12 Score=119.71 Aligned_cols=241 Identities=13% Similarity=0.058 Sum_probs=150.9
Q ss_pred cccchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCC-CCCCCHHHHHHHHcCCCc-c-------hhhhhhh--------
Q 047978 52 LVPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSG-VDMPGADYQLTKLLGLKP-S-------VKRVMLT-------- 114 (320)
Q Consensus 52 ~~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~-~~~p~~a~~l~~~LGl~~-~-------~c~~~l~-------- 114 (320)
.+++..+|+.+|++++|+++|++|+|||.||++++++ ...+..+..++..+|++. . .|+++++
T Consensus 22 ~~~~~~~La~~A~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~a~~va~~lGl~~~~p~~~V~~~Casg~~ai~~A~~~ 101 (393)
T PRK05656 22 ANIPAVELGAAVIRRLLEQTGLDPAQVDEVILGQVLTAGAGQNPARQAAIKAGLPHSVPAMTLNKVCGSGLKALHLAAQA 101 (393)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCCCCCcHHHHHHHHcCCCCCcceEEecccchhHHHHHHHHHHH
Confidence 3678899999999999999999999999999999887 456667888999999975 2 2776544
Q ss_pred hhcCCCCeEEEEEeeccccc-cc---------------------CC-CC----CC-------------------------
Q 047978 115 AESNAGARVLVVCSEITVGT-FR---------------------AP-SD----EN------------------------- 142 (320)
Q Consensus 115 l~~~~~~~~LVv~~e~~s~~-~~---------------------~~-~~----~~------------------------- 142 (320)
+++|..+.+||+++|..|.. +. ++ .+ ..
T Consensus 102 I~sG~~d~vLv~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~~~~~~gitre~~d~~Av~ 181 (393)
T PRK05656 102 IRCGDAEVIIAGGQENMSLAPYVLPGARTGLRMGHAQLVDSMITDGLWDAFNDYHMGITAENLVEKYGISREAQDAFAAA 181 (393)
T ss_pred HHcCCCCEEEEEEEhhhccCccccccccccccccchhhhhhhccccccccccCCCHHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 78899999999999977641 10 00 00 00
Q ss_pred -------------chhhh---------------------------------------hhhh-------hccCceEEEEee
Q 047978 143 -------------LSCLV---------------------------------------NRAI-------VGDGTAALIVGA 163 (320)
Q Consensus 143 -------------~~~~~---------------------------------------~~~~-------~GDgAaA~ll~~ 163 (320)
.++.+ .+.+ ++|||+|+||++
T Consensus 182 sh~~a~~a~~~a~~~~ei~pv~~~~~~~~~~~~~~D~~~r~~~~~e~l~~l~p~~~~~g~lt~~~~s~~~DGAaa~vl~s 261 (393)
T PRK05656 182 SQQKAVAAIEAGRFDDEITPILIPQRKGEPLAFATDEQPRAGTTAESLAKLKPAFKKDGSVTAGNASSLNDGAAAVLLMS 261 (393)
T ss_pred HHHHHHHHHHcCCCcceeeeEEeccCCCCceEeccCCCCCCCCCHHHHhcCCCCcCCCCCEEccccCCCCCceEEEEEec
Confidence 00000 0002 566666666665
Q ss_pred cCCC-CCC-CCeeEEeccCceecCCCcccccccccccceechhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHHH
Q 047978 164 CPDI-NTE-RPLFHIVPTAQTILPDSEDAIKGHFRESPLIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQI 241 (320)
Q Consensus 164 ~~~~-~~~-~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~ 241 (320)
++.. ... ++..++.+.+.... ... ........+++.+++++|++++||| ++-+|-........+
T Consensus 262 ~~~A~~~g~~~~a~i~g~~~~~~---------~~~---~~~~~~~~a~~~al~~agl~~~dId--~~e~~d~f~~~~~~~ 327 (393)
T PRK05656 262 AAKAKALGLPVLAKIAAYANAGV---------DPA---IMGIGPVSATRRCLDKAGWSLAELD--LIEANEAFAAQSLAV 327 (393)
T ss_pred HHHHHHCCCCeeEEEEEEEEecC---------CCc---ccchhHHHHHHHHHHHcCCCHHHCC--EEEecCccHHHHHHH
Confidence 4321 000 11223322211100 000 1112445788999999999999973 788888766666677
Q ss_pred HHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCCCCCCceEEEEeeccchhhhheeeee
Q 047978 242 EGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEAIVLRS 314 (320)
Q Consensus 242 ~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~~l~~ 314 (320)
.+.||++.+++-.+ ...-.+||...|+=...+.+++.+. +.+.| .+.|.....+|..-.+++++.
T Consensus 328 ~e~lg~~~~~vn~~-Gg~~a~GHp~gAsG~~~~~~l~~~l----~~~~~---~~gl~~~c~~gG~g~a~~~e~ 392 (393)
T PRK05656 328 GKELGWDAAKVNVN-GGAIALGHPIGASGCRVLVTLLHEM----IRRDA---KKGLATLCIGGGQGVALAIER 392 (393)
T ss_pred HHHhCCCCccCCcC-CCHHHhCccHHHHHHHHHHHHHHHH----HHcCC---CEEEEEEcccCcceEEEEEec
Confidence 88999876655332 1344579998888777777777652 12223 454444444444445566653
No 48
>PRK09051 beta-ketothiolase; Provisional
Probab=99.41 E-value=1.1e-11 Score=117.59 Aligned_cols=82 Identities=12% Similarity=-0.024 Sum_probs=67.0
Q ss_pred cccchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCC-CCCC-CHHHHHHHHcCCCc-c-------hhhhhhh-------
Q 047978 52 LVPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSG-VDMP-GADYQLTKLLGLKP-S-------VKRVMLT------- 114 (320)
Q Consensus 52 ~~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~-~~~p-~~a~~l~~~LGl~~-~-------~c~~~l~------- 114 (320)
.+++..+|+.+|+++||+++|++|+|||.||++++++ +..+ ..+..++..+|++. . .|+++++
T Consensus 23 ~~~~~~eL~~~A~~~AL~~agi~~~dID~vi~g~~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~V~~aCaSg~~Al~~A~~ 102 (394)
T PRK09051 23 KDVAPTDLGATVVREALARAGVDPDQVGHVVFGHVIPTEPRDMYLSRVAAINAGVPQETPAFNVNRLCGSGLQAIVSAAQ 102 (394)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEeeeccccCCCccHHHHHHHHcCCCCCCceEEecccchHHHHHHHHHHH
Confidence 4778999999999999999999999999999999988 4333 45566667789863 2 3776544
Q ss_pred -hhcCCCCeEEEEEeecccc
Q 047978 115 -AESNAGARVLVVCSEITVG 133 (320)
Q Consensus 115 -l~~~~~~~~LVv~~e~~s~ 133 (320)
+++|..+.+||+++|+.|.
T Consensus 103 ~I~sG~~d~vLvvG~E~mS~ 122 (394)
T PRK09051 103 AILLGDADVAIGGGAESMSR 122 (394)
T ss_pred HHHcCCCCEEEEEeehhccc
Confidence 7889999999999998874
No 49
>PRK12404 stage V sporulation protein AD; Provisional
Probab=99.39 E-value=1.6e-11 Score=110.55 Aligned_cols=235 Identities=14% Similarity=0.138 Sum_probs=143.0
Q ss_pred ccchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCc----chhhhhhh--------hhcCCC
Q 047978 53 VPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKP----SVKRVMLT--------AESNAG 120 (320)
Q Consensus 53 ~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~----~~c~~~l~--------l~~~~~ 120 (320)
++...+|+.+|+++||+++|++++|||+++.++.+....|+ ..+++.||++. ..|+++.+ +++|..
T Consensus 51 EkAE~~L~~EA~~~AL~kAGI~~~DID~i~vGdL~nQ~ips--sfvar~LGIP~~gV~gACSTg~eAL~lAa~~VaSG~A 128 (334)
T PRK12404 51 EKAERKLLEEACSRAIEKAKLRKEDIQFFLAGDLMNQITPT--SFAARTLGIPYLGLFGACSTSMEGLALAALIVNSGGA 128 (334)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCcCcH--HHHHHHhCCCccceeecCHHHHHHHHHHHHHHHcCCC
Confidence 45667899999999999999999999999999888655665 49999999875 25887654 778999
Q ss_pred CeEEEEEeecccc---cccCCCCCCchhhhhhhhhccCceEEEEeecCCCCCCCCeeEEeccCceecCCCcccccccccc
Q 047978 121 ARVLVVCSEITVG---TFRAPSDENLSCLVNRAIVGDGTAALIVGACPDINTERPLFHIVPTAQTILPDSEDAIKGHFRE 197 (320)
Q Consensus 121 ~~~LVv~~e~~s~---~~~~~~~~~~~~~~~~~~~GDgAaA~ll~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 197 (320)
++||++++...+. .|+-|.+.-.+...+...--=||+|+||++++.. +...-.+.|.-..=.-.++ ..|
T Consensus 129 d~VLavtsSH~~~aErqfR~P~eyG~Qrp~taqwTvTgaga~~l~~~~~~----~~i~~~T~Gkv~D~g~~d~----~nM 200 (334)
T PRK12404 129 KYVLTGASSHNAAVEKQFRYPTEYGGQKPPTAQWTVTGAGAAILSKTGDG----PRVTSATIGRVVDMGLTDP----FNM 200 (334)
T ss_pred CEEEEEeCcccchhhhhccCcccccCcCCCcccEEEEceEEEEEecCCCC----ceEEEEEEEEEEecCCCCc----ccc
Confidence 9999999887753 3555654321212222233468899999987542 2222222111100000111 111
Q ss_pred cceechhHHHHHHHHhhhcCCCCCCCCceEEEEcC---CChhHHHHHHHHcCCCc-chhhhh-------HHHHhccCCcc
Q 047978 198 SPLIADNIDKFLAESFDQVSLNDHDWNSLFWMMHP---IGPAVLDQIEGKLGLEK-TKLRET-------RHVLSEYGNMA 266 (320)
Q Consensus 198 ~g~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~---~~~~~~~~~~~~lg~~~-e~~~~~-------~~~~~~~Gn~~ 266 (320)
..--...-..+|...|+..|.+++|+| .++.-- .+..++..+.++-|++. ++.+.+ .+.--.-|-.|
T Consensus 201 GaaMAPAA~dti~~h~~d~~~~~~~yD--lI~TGDLg~vG~~i~~~ll~~~g~~~~~~~~~DCG~~iyd~~~~~~aGgSG 278 (334)
T PRK12404 201 GGAMAPAAVDTIEAHLRDRQIDASYYD--LIVTGDLGHVGREIAKDLLHKHGVKVPEEQFQDCGLLIYREGQPVIAGASG 278 (334)
T ss_pred hhhhhHHHHHHHHHHHHHhCCChhhcc--EEEEcchHHHHHHHHHHHHHHcCCCCCcccccccCeEEecCCCcccCCCcc
Confidence 111123445677888999999999984 444433 45678888888877764 322111 00001123344
Q ss_pred -cchHHHHHHHHHHhchhcCCCCCCCCCceEEEEeeccchh
Q 047978 267 -SATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLT 306 (320)
Q Consensus 267 -sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~ 306 (320)
++|-.+...++++. +++|++ .|||+++.|+=++
T Consensus 279 cgcsA~v~~g~~~~~-~~~g~~------~rvL~v~TGALlS 312 (334)
T PRK12404 279 PGCSATVTYGHLLNR-MKRGEL------KRILVVATGALLS 312 (334)
T ss_pred cchHHHHHHHHHHHH-HhcCCc------eEEEEEEchhhcC
Confidence 34444455555554 222433 6799999887443
No 50
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=99.39 E-value=1.6e-11 Score=116.61 Aligned_cols=242 Identities=16% Similarity=0.078 Sum_probs=153.3
Q ss_pred cccchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCC-C--CCCCHHHHHHHHcCCCcc-------hhhhhhh-------
Q 047978 52 LVPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSG-V--DMPGADYQLTKLLGLKPS-------VKRVMLT------- 114 (320)
Q Consensus 52 ~~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~-~--~~p~~a~~l~~~LGl~~~-------~c~~~l~------- 114 (320)
.+++..+|+.+|++++|+++|++++|||.||++++++ . ..|..+..++..||+++. .|++.+.
T Consensus 18 ~~~~~~eLa~~a~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~~~a~~va~~lGl~~~~~~~v~~aCasg~~ai~~A~~ 97 (389)
T PRK06064 18 WDVSLRDLAVEAGLEALEDAGIDGKDIDAMYVGNMSAGLFVSQEHIAALIADYAGLAPIPATRVEAACASGGAALRQAYL 97 (389)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccccccHHHHHHHHcCCCCCCeeEEeCCcHHHHHHHHHHHH
Confidence 3578899999999999999999999999999988766 3 246778899999999742 2654322
Q ss_pred -hhcCCCCeEEEEEeecccccc----------------cCCCCCC-----------------------------------
Q 047978 115 -AESNAGARVLVVCSEITVGTF----------------RAPSDEN----------------------------------- 142 (320)
Q Consensus 115 -l~~~~~~~~LVv~~e~~s~~~----------------~~~~~~~----------------------------------- 142 (320)
+++|..+++||+++|..+... ..|....
T Consensus 98 ~I~sG~~~~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~al~a~~~~~~yG~s~e~~a~~a~~~~~~A~ 177 (389)
T PRK06064 98 AVASGEADVVLAAGVEKMTDVPTPDATEAIARAGDYEWEEFFGATFPGLYALIARRYMHKYGTTEEDLALVAVKNHYNGS 177 (389)
T ss_pred HHHCCCCCEEEEEEEEecccCcchhhhhhhhcccccccccccCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHh
Confidence 789999999999999765310 0000000
Q ss_pred ------------ch------------hhhhhhhhccCceEEEEeecCCC-CCCCCeeEEeccCceecCCCcccccccccc
Q 047978 143 ------------LS------------CLVNRAIVGDGTAALIVGACPDI-NTERPLFHIVPTAQTILPDSEDAIKGHFRE 197 (320)
Q Consensus 143 ------------~~------------~~~~~~~~GDgAaA~ll~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 197 (320)
.+ .....+.++|||+|+||++.+.. ........+.+.+....+.... -..
T Consensus 178 ~np~a~~~~~~t~~~~~~s~~i~~Pl~~~d~~~~~dGAaa~vL~s~~~A~~~~~~~v~I~g~g~~~~~~~~~-----~~~ 252 (389)
T PRK06064 178 KNPYAQFQKEITVEQVLNSPPVADPLKLLDCSPITDGAAAVILASEEKAKEYTDTPVWIKASGQASDTIALH-----DRK 252 (389)
T ss_pred hCcHhhhCCCCCHHHHhcCCcccCCCchhhcCCCCCcceEEEEecHHHHHHhcCCCeEEEEEEEecCccccc-----ccc
Confidence 00 00122366999999999976532 1111123444433221111100 000
Q ss_pred cceechhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHHHHHHcCCCcc----------------hhhhhHHH--H
Q 047978 198 SPLIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKT----------------KLRETRHV--L 259 (320)
Q Consensus 198 ~g~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e----------------~~~~~~~~--~ 259 (320)
+-.........++.+++++|++++|+ +++-+|-......-...+.+|+.++ +++.|- + .
T Consensus 253 ~~~~~~~~~~a~~~al~~aGi~~~di--d~~e~~d~ft~~~~~~~e~lgl~~~G~~~~~~~~g~~~~~g~~pvN~-~GG~ 329 (389)
T PRK06064 253 DFTTLDAAVVAAEKAYKMAGIEPKDI--DVAEVHDCFTIAEILAYEDLGFAKKGEGGKLAREGQTYIGGDIPVNP-SGGL 329 (389)
T ss_pred cccccHHHHHHHHHHHHHcCCCHHHC--CEEEecCCCcHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeecC-CCCc
Confidence 00012344578899999999999997 3888998887776667899998642 222220 0 1
Q ss_pred hccCCcccchHHHHHHHHHHhchhc---C--CCCCCCCCceEEEEeeccc
Q 047978 260 SEYGNMASATVLFVLDEMRKRSVEE---G--KATTGEELEWGVLLGFEAG 304 (320)
Q Consensus 260 ~~~Gn~~sasi~~~L~~~~~~~~~~---g--~l~~G~~~d~vll~~~G~G 304 (320)
--+||...++=+..+.+++.+..++ | .+ +| .++.+..++|..
T Consensus 330 l~~Ghp~~a~G~~~~~e~~~qL~g~a~~g~rqv-~~--a~~~l~~~~g~~ 376 (389)
T PRK06064 330 KAKGHPVGATGVSQAVEIVWQLRGEAEKGRQQV-IG--AGYGLTHNVGGT 376 (389)
T ss_pred ccCCCCcchhHHHHHHHHHHHHhCCCCCCCccC-CC--ccEEEEecCCCc
Confidence 1279999888888888887764422 1 11 23 267777777743
No 51
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=99.39 E-value=7.6e-12 Score=118.54 Aligned_cols=239 Identities=16% Similarity=0.102 Sum_probs=147.9
Q ss_pred ccchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCC-CCCCCHHHHHHHHcCCCc-c-------hhhhhhh--------h
Q 047978 53 VPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSG-VDMPGADYQLTKLLGLKP-S-------VKRVMLT--------A 115 (320)
Q Consensus 53 ~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~-~~~p~~a~~l~~~LGl~~-~-------~c~~~l~--------l 115 (320)
+++..+|+.+|+++||+++|++++|||.||+++.++ +..|..+..++..+|++. . .|+++++ +
T Consensus 18 ~~t~~~La~~A~~~Al~dAgl~~~dID~vv~g~~~~~~~~~~~a~~va~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I 97 (386)
T TIGR01930 18 DVSAEDLGAAVIKELLERNPLDPELIDDVIFGNVLQAGEQQNIARQAALLAGLPESVPAYTVNRQCASGLQAVILAAQLI 97 (386)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCceeeeecchhhHHHHHHHHHHHHH
Confidence 688999999999999999999999999999988877 555777888999999974 2 2766544 7
Q ss_pred hcCCCCeEEEEEeeccccccc---C-------CC--------------C----CC---------------c---------
Q 047978 116 ESNAGARVLVVCSEITVGTFR---A-------PS--------------D----EN---------------L--------- 143 (320)
Q Consensus 116 ~~~~~~~~LVv~~e~~s~~~~---~-------~~--------------~----~~---------------~--------- 143 (320)
++|..+++||+++|+.+.... . .. + .. +
T Consensus 98 ~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~a~~y~~~yG~t~e~la~vav~ 177 (386)
T TIGR01930 98 RAGEADVVVAGGVESMSRVPYSLPRSRREGVDPGRFELEDQILKDGLTDPLNGLSMGLTAENLAKKYGISREEQDEYALR 177 (386)
T ss_pred HCCCCCEEEEEEehhhccCccccccccccccccCccccchhhcCccccccccCCCHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 889999999999998653100 0 00 0 00 0
Q ss_pred ------hh-----------------------------------------------------hhhhhhhccCceEEEEeec
Q 047978 144 ------SC-----------------------------------------------------LVNRAIVGDGTAALIVGAC 164 (320)
Q Consensus 144 ------~~-----------------------------------------------------~~~~~~~GDgAaA~ll~~~ 164 (320)
.+ ...++.++|||+|+||++.
T Consensus 178 ~~~~A~~n~~~g~~~~~i~P~a~~~~~~~~~~~~da~~r~~~t~e~v~~s~~i~~P~~~l~~~d~~~~~dGAaa~vl~s~ 257 (386)
T TIGR01930 178 SHQRAAKAWEEGLFKDEIVPVSVKGRKGPVTVSTDEGIRPNTTLEKLAKLKPAFDPNGTVTAGNSSPLNDGAAALLLMSE 257 (386)
T ss_pred HHHHHHHHHHcCCCCCeEEEEEeccCCCCeEeCCCCCCCCCCCHHHHhCCCCCcCCCCeeeCCccCCCCcceeEEEEecH
Confidence 00 0001112455555555543
Q ss_pred CCC-CC-CCCeeEEeccCceecCCCcccccccccccceechhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHHHH
Q 047978 165 PDI-NT-ERPLFHIVPTAQTILPDSEDAIKGHFRESPLIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIE 242 (320)
Q Consensus 165 ~~~-~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~ 242 (320)
+.. .. .++.-.+...+..... .. .........++.+++++|++++|+| ++-+|-......-...
T Consensus 258 ~~A~~~~~~~~~~i~g~g~~~~~---------~~---~~~~~~~~a~~~a~~~Agi~~~did--~~e~~d~fa~~~~~~~ 323 (386)
T TIGR01930 258 ERAKELGLTPLARIVSFAVAGVD---------PE---IMGLGPVPAIPKALKKAGLSISDID--LFEINEAFAAQVLACI 323 (386)
T ss_pred HHHHHCCCCccEEEEEEEEecCC---------Cc---cccccHHHHHHHHHHHcCCCHHHCC--eeehcchhHHHHHHHH
Confidence 321 00 0111122221111000 00 0112335788999999999999973 7777777655555567
Q ss_pred HHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCCCCCCceEEEEeeccchhhhheeee
Q 047978 243 GKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEAIVLR 313 (320)
Q Consensus 243 ~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~~l~ 313 (320)
+.||+....+-.+ --.--+||+..++=...+.+++.+.. | +.+ ++.|..+.+.|..-.+++++
T Consensus 324 e~lG~~~~pvn~~-GG~l~~Ghp~gasG~~~~~e~~~qL~--g--~~~---~~gl~~~~~~gG~g~~~~~e 386 (386)
T TIGR01930 324 KELGLDLEKVNVN-GGAIALGHPLGASGARIVTTLLHELK--R--RGG---RYGLATICIGGGQGIAVILE 386 (386)
T ss_pred HHhCCChhhcCCC-CChHhhCCcHHHHHHHHHHHHHHHHH--h--cCC---CEEEEEEeccCCceEEEEeC
Confidence 8898854443222 11334799999998888888887743 2 123 66777666766555566653
No 52
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=99.37 E-value=8.9e-12 Score=118.84 Aligned_cols=243 Identities=14% Similarity=0.115 Sum_probs=149.6
Q ss_pred chHHHHHHHHHHHHHHcCCCCCCcCE----EEEEeeCC---------------------------CCCCCHHHHHHHHcC
Q 047978 55 KVPKLGKEAVSKAIKEWGQPISKITH----LISCSVSG---------------------------VDMPGADYQLTKLLG 103 (320)
Q Consensus 55 ~~~~la~~Aa~~aL~~ag~~~~dId~----li~~s~t~---------------------------~~~p~~a~~l~~~LG 103 (320)
....|+.+|+++||+++|++++++|. ++++++.+ ...+..+.+|+..||
T Consensus 70 ~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 149 (406)
T cd00834 70 RFAQFALAAAEEALADAGLDPEELDPERIGVVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQVAIRLG 149 (406)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCCccceEEEEccCCcchHHHHHHHHHHHhcCCcccChhHHhhhcccHHHHHHHHHhC
Confidence 45789999999999999999877664 55555432 123456789999999
Q ss_pred CCcc------hhhhhhh--------hhcCCCCeEEEEEeecccccc---------------------cCCCCCCchhhhh
Q 047978 104 LKPS------VKRVMLT--------AESNAGARVLVVCSEITVGTF---------------------RAPSDENLSCLVN 148 (320)
Q Consensus 104 l~~~------~c~~~l~--------l~~~~~~~~LVv~~e~~s~~~---------------------~~~~~~~~~~~~~ 148 (320)
++.. .|+++++ +++|..+++||+++|..+..+ ..|-+. ...
T Consensus 150 l~g~~~~v~~acas~~~Al~~A~~~i~~G~~d~aLvgg~d~~~~p~~~~~~~~~~~l~~~~~~p~~~~~pf~~----~~~ 225 (406)
T cd00834 150 LRGPNYTVSTACASGAHAIGDAARLIRLGRADVVIAGGAEALITPLTLAGFAALRALSTRNDDPEKASRPFDK----DRD 225 (406)
T ss_pred CCCcccccchHHHHHHHHHHHHHHHHHcCCCCEEEEcCcccccCHHHHHHHHhcCCcCCCCCCCccCCCCCCC----CCC
Confidence 9642 3766543 788999999999999876100 112111 234
Q ss_pred hhhhccCceEEEEeecCCCC-CC-CCeeEEeccCceecCCCcccccccccccceechhHHHHHHHHhhhcCCCCCCCCce
Q 047978 149 RAIVGDGTAALIVGACPDIN-TE-RPLFHIVPTAQTILPDSEDAIKGHFRESPLIADNIDKFLAESFDQVSLNDHDWNSL 226 (320)
Q Consensus 149 ~~~~GDgAaA~ll~~~~~~~-~~-~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~i~~~l~~~g~~~~d~~~~ 226 (320)
++++||||+|+||++.+... .. .....+.+.+......... ... ...+.+.++++++|+++|++++|| +
T Consensus 226 g~~~geGA~a~vL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~----~~~---~~~~~~~~~i~~al~~agi~~~dI--d 296 (406)
T cd00834 226 GFVLGEGAGVLVLESLEHAKARGAKIYAEILGYGASSDAYHIT----APD---PDGEGAARAMRAALADAGLSPEDI--D 296 (406)
T ss_pred CEeeeccEEEEEEecHHHHHHCCCeEEEEEEEEEecccCCCCC----CCC---CCcHHHHHHHHHHHHHcCCCHHHC--C
Confidence 78999999999999865421 01 1122333322111000000 001 113567789999999999999997 3
Q ss_pred EEEEcCCChhHHHH-----HHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCCC-----------
Q 047978 227 FWMMHPIGPAVLDQ-----IEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTG----------- 290 (320)
Q Consensus 227 ~~i~h~~~~~~~~~-----~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G----------- 290 (320)
++.+|..+....+. +.+.++-..+++..+ ..-..+||+.+|+=++.|..++... ++|.+.|=
T Consensus 297 ~v~~h~tgt~~~d~~E~~al~~~~~~~~~~~~v~-s~k~~~Gh~~~AsG~~~l~~~~~~l-~~~~ip~~~~~~~~~~~~~ 374 (406)
T cd00834 297 YINAHGTSTPLNDAAESKAIKRVFGEHAKKVPVS-STKSMTGHLLGAAGAVEAIATLLAL-RDGVLPPTINLEEPDPECD 374 (406)
T ss_pred EEecccccCccccHHHHHHHHHHhcccCCCCcee-CcchhhccchhhhhHHHHHHHHHHH-hcCCcCCCCCCCCCCCCCC
Confidence 99999877654433 344455432333332 1355689999999888887665321 11433210
Q ss_pred ------C----CCceEEEEeeccchhhhheee
Q 047978 291 ------E----ELEWGVLLGFEAGLTVEAIVL 312 (320)
Q Consensus 291 ------~----~~d~vll~~~G~G~~~~a~~l 312 (320)
+ ...+++.-+||.|.+-.+++|
T Consensus 375 ~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl 406 (406)
T cd00834 375 LDYVPNEAREAPIRYALSNSFGFGGHNASLVF 406 (406)
T ss_pred ccccCCCCccccccEEEEeeecCCceeeEEEC
Confidence 0 014677778888777666553
No 53
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=99.36 E-value=5.2e-11 Score=112.50 Aligned_cols=241 Identities=16% Similarity=0.065 Sum_probs=154.5
Q ss_pred ccchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCC-CCCCCHHHHHHHHcCCCcc-------hhhhhhh--------hh
Q 047978 53 VPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSG-VDMPGADYQLTKLLGLKPS-------VKRVMLT--------AE 116 (320)
Q Consensus 53 ~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~-~~~p~~a~~l~~~LGl~~~-------~c~~~l~--------l~ 116 (320)
+.+..+|+.+|++++|+++|++++|||.++++++.+ ...|..+..++..||+++. .|++.+. ++
T Consensus 13 ~~~~~eL~~~A~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~a~~va~~lGl~~~~~~~v~~~c~sg~~al~~Aa~~I~ 92 (375)
T cd00829 13 DRSPLELAAEAARAALDDAGLEPADIDAVVVGNAAGGRFQSFPGALIAEYLGLLGKPATRVEAAGASGSAAVRAAAAAIA 92 (375)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecccccccccchHHHHHHHcCCCCcceeeEeCccHHHHHHHHHHHHHHH
Confidence 678999999999999999999999999999988766 4457788999999999643 2655432 78
Q ss_pred cCCCCeEEEEEeecccccc-----c----C-------CCCC-C-------------------ch----------------
Q 047978 117 SNAGARVLVVCSEITVGTF-----R----A-------PSDE-N-------------------LS---------------- 144 (320)
Q Consensus 117 ~~~~~~~LVv~~e~~s~~~-----~----~-------~~~~-~-------------------~~---------------- 144 (320)
++..+.+||+++|..+... . + +... . ++
T Consensus 93 sG~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a~~~~~~~g~t~e~~~~va~~~~~~A~~n 172 (375)
T cd00829 93 SGLADVVLVVGAEKMSDVPTGDEAGGRASDLEWEGPEPPGGLTPPALYALAARRYMHRYGTTREDLAKVAVKNHRNAARN 172 (375)
T ss_pred hCCCCEEEEEEEeecccCcccchhhccccchhhhhcccccCCChHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcC
Confidence 8999999999999876421 0 0 0000 0 00
Q ss_pred ------------------------hhhhhhhhccCceEEEEeecCCC-CCCCCeeEEeccCceecCCCcccccccccccc
Q 047978 145 ------------------------CLVNRAIVGDGTAALIVGACPDI-NTERPLFHIVPTAQTILPDSEDAIKGHFRESP 199 (320)
Q Consensus 145 ------------------------~~~~~~~~GDgAaA~ll~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g 199 (320)
.....+.++|||+|+||++++.. ....+...+...+....+.... .... -
T Consensus 173 p~A~~~~~~t~d~~~~~~~i~~pl~~~~~~~~~DGaaa~vl~s~~~a~~~~~~~~~i~g~~~~~~~~~~~----~~~~-~ 247 (375)
T cd00829 173 PYAQFRKPITVEDVLNSRMIADPLRLLDCCPVSDGAAAVVLASEERARELTDRPVWILGVGAASDTPSLS----ERDD-F 247 (375)
T ss_pred ChhhcCCCCCHHHHhcCCcccCCCchhhcCCCCCceeEEEEecHHHHhhcCCCCeEEEEEEEecCCcccc----cccc-c
Confidence 00112346999999999986542 1112233444432221111100 0000 0
Q ss_pred eechhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHHHHHHcCCCc--c----------------hhhhhHHHHhc
Q 047978 200 LIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEK--T----------------KLRETRHVLSE 261 (320)
Q Consensus 200 ~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~--e----------------~~~~~~~~~~~ 261 (320)
........+++.+++++|++++|+ +++=+|-......-...+.||+.+ + ++-.+ --.-.
T Consensus 248 ~~~~~~~~a~~~al~~Agl~~~di--d~~ei~d~F~~~~l~~~e~lGl~~~g~~~~~~~~g~~~~~G~~pvN~~-GG~la 324 (375)
T cd00829 248 LSLDAARLAARRAYKMAGITPDDI--DVAELYDCFTIAELLALEDLGFCEKGEGGKLVREGDTAIGGDLPVNTS-GGLLS 324 (375)
T ss_pred cccHHHHHHHHHHHHHcCCCHHHC--CEEEecCcChHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCccccCC-Cchhc
Confidence 113455678999999999999997 388889888888888889999876 3 22111 01122
Q ss_pred cCCcccchHHHHHHHHHHhchhc---CCCCCCCCCceEEEEeeccc
Q 047978 262 YGNMASATVLFVLDEMRKRSVEE---GKATTGEELEWGVLLGFEAG 304 (320)
Q Consensus 262 ~Gn~~sasi~~~L~~~~~~~~~~---g~l~~G~~~d~vll~~~G~G 304 (320)
+||...++-...+.++..+...+ -.++.. +..+..+.|..
T Consensus 325 ~Ghp~gatG~~~~~e~~~qlrg~ag~~qv~~~---~~~l~~~~gg~ 367 (375)
T cd00829 325 KGHPLGATGLAQAVEAVRQLRGEAGARQVPGA---RVGLAHNIGGT 367 (375)
T ss_pred CCCCccHHHHHHHHHHHHHhcCCcccccCCCc---cEEEEecCCCc
Confidence 69999888877777777664321 112222 55666666543
No 54
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=99.34 E-value=2.7e-11 Score=116.20 Aligned_cols=247 Identities=13% Similarity=0.123 Sum_probs=149.9
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCcC----EEEEEeeCC-CC-------------------CCCHHHHHHHHcCCCcc----
Q 047978 56 VPKLGKEAVSKAIKEWGQPISKIT----HLISCSVSG-VD-------------------MPGADYQLTKLLGLKPS---- 107 (320)
Q Consensus 56 ~~~la~~Aa~~aL~~ag~~~~dId----~li~~s~t~-~~-------------------~p~~a~~l~~~LGl~~~---- 107 (320)
...|+.+|+++||+++|+++++|| .||+++.++ |. .+..+.+|+..||++..
T Consensus 87 ~~~l~~~aa~~Al~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lgl~g~~~~v 166 (424)
T smart00825 87 QQRLLLEVAWEALEDAGIDPESLRGSRTGVFVGAMSSDYAELLARDPEDIEGYAATGTARSFIANRISYFFDLRGPSVTV 166 (424)
T ss_pred HHHHHHHHHHHHHHHcCCChhHcCCCCCEEEEEEcHHHHHHHHhhCccccchhhhccchhHHHHHHHHHHhCCCCCcccc
Confidence 356899999999999999999999 788887654 32 34567889999999753
Q ss_pred --hhhhhhh--------hhcCCCCeEEEEEeeccccc----------ccCCCC--CCchhhhhhhhhccCceEEEEeecC
Q 047978 108 --VKRVMLT--------AESNAGARVLVVCSEITVGT----------FRAPSD--ENLSCLVNRAIVGDGTAALIVGACP 165 (320)
Q Consensus 108 --~c~~~l~--------l~~~~~~~~LVv~~e~~s~~----------~~~~~~--~~~~~~~~~~~~GDgAaA~ll~~~~ 165 (320)
.|++.+. |++|..+.+||+++|..... +..+.. +..+....++++||||+|+||++.+
T Consensus 167 ~~acasg~~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~~~~g~~~geGAaalVLe~~e 246 (424)
T smart00825 167 DTACSSSLVALHLACQSLRSGECDMALAGGVNLILSPDTFVGFSRAGMLSPDGRCKTFDADADGYVRGEGVGVVVLKRLS 246 (424)
T ss_pred ccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeecCCHHHHHHHhhcCCCCCCCCCCCCCCCCCcccccceEEEEEEccHH
Confidence 2665433 78999999999999974310 111110 0001122478899999999999754
Q ss_pred CCC--CCCCeeEEeccCceecCCCcccccccccccceechhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHH-----
Q 047978 166 DIN--TERPLFHIVPTAQTILPDSEDAIKGHFRESPLIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVL----- 238 (320)
Q Consensus 166 ~~~--~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~----- 238 (320)
... -.....++...+......... ....+ ......+++.+|+++|++++|| +++.+|-.+.+..
T Consensus 247 ~A~~~g~~i~a~I~g~~~~~~~~~~~----~~~~~---~~~~~~a~~~al~~Agl~~~dI--d~i~~h~tgt~~~d~~E~ 317 (424)
T smart00825 247 DALRDGDPILAVIRGSAVNQDGRSNG----LTAPS---GPAQARLIRQALARAGVDPADV--DYVEAHGTGTPLGDPIEA 317 (424)
T ss_pred HHHHCCCeEEEEEEEEEEeCCCCCCC----CCCcC---HHHHHHHHHHHHHHhCCCHHHc--cEEEeeCCCCCCCCHHHH
Confidence 321 011122333322111110000 01111 2456678999999999999996 3889996554322
Q ss_pred HHHHHHcCCCc---chhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCC--------------------------C
Q 047978 239 DQIEGKLGLEK---TKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKAT--------------------------T 289 (320)
Q Consensus 239 ~~~~~~lg~~~---e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~--------------------------~ 289 (320)
..+.+.++... .++..+ ..-..+||+.+|+-.+.|...+.... ++.+. +
T Consensus 318 ~al~~~~~~~~~~~~~~~v~-s~k~~~Gh~~~AsG~~~l~~~~~~l~-~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (424)
T smart00825 318 EALAAVFGQGRPRDGPLLLG-SVKSNIGHLEAAAGVAGLIKVVLALR-HGTIPPTLHFETPNPHIDLEESPLRVPTEATP 395 (424)
T ss_pred HHHHHHHhccCCCCCceEEe-ccccccCCcccchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCCCCcccCceEccCCCcC
Confidence 23444554311 222222 12345699999988877766543211 12211 0
Q ss_pred ---CCCCceEEEEeeccchhhhheeee
Q 047978 290 ---GEELEWGVLLGFEAGLTVEAIVLR 313 (320)
Q Consensus 290 ---G~~~d~vll~~~G~G~~~~a~~l~ 313 (320)
+...+.++..+||-|-...+++++
T Consensus 396 ~~~~~~~~~~l~~s~gfgg~n~~lvl~ 422 (424)
T smart00825 396 WPATGRPRRAGVSSFGFGGTNAHVILE 422 (424)
T ss_pred CCCCCCccEEEEeccCCCCceEEEEEe
Confidence 001267888999988888888775
No 55
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=99.31 E-value=6.9e-11 Score=112.22 Aligned_cols=240 Identities=14% Similarity=0.064 Sum_probs=144.9
Q ss_pred ccchHHHHHHHHHHHHHHc-CCCCCCcCEEEEEeeCC-CCCCCHHHHH-HHHcCCCc-c-------hhhhhhh-------
Q 047978 53 VPKVPKLGKEAVSKAIKEW-GQPISKITHLISCSVSG-VDMPGADYQL-TKLLGLKP-S-------VKRVMLT------- 114 (320)
Q Consensus 53 ~e~~~~la~~Aa~~aL~~a-g~~~~dId~li~~s~t~-~~~p~~a~~l-~~~LGl~~-~-------~c~~~l~------- 114 (320)
+++..+|+.+|++++|+++ |++++|||.||++++++ ...|....++ ...+|++. . .|+++++
T Consensus 28 ~~s~~eLa~~A~~~AL~~a~gl~~~dID~vi~g~~~~~~~~~~~~ar~~~~~~Gl~~~~p~~~V~~aCaSg~~Al~~A~~ 107 (399)
T PRK09052 28 NTRPDDLLAHVLRSAVAQVPGLDPKLIEDAIVGCAMPEAEQGLNVARIGALLAGLPNSVGGVTVNRFCASGLQAVAMAAD 107 (399)
T ss_pred CCCHHHHHHHHHHHHHHhccCcCHHHCCEEEEEecCCCCCCCchHHHHHHHHcCCCCCCceeeecchhhHHHHHHHHHHH
Confidence 5788999999999999997 99999999999999887 5455555554 55558874 2 3766543
Q ss_pred -hhcCCCCeEEEEEeecccccc--c-----C------CC---CCC-----------------------------------
Q 047978 115 -AESNAGARVLVVCSEITVGTF--R-----A------PS---DEN----------------------------------- 142 (320)
Q Consensus 115 -l~~~~~~~~LVv~~e~~s~~~--~-----~------~~---~~~----------------------------------- 142 (320)
+++|..+.+||+++|..|..- . + +. +..
T Consensus 108 ~I~sG~~d~vLv~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ygitre~~d~~a~~sh~~a~~n~ 187 (399)
T PRK09052 108 RIRVGEADVMIAAGVESMSMVPMMGNKPSMSPAIFARDENVGIAYGMGLTAEKVAEQWKVSREDQDAFALESHQKAIAAQ 187 (399)
T ss_pred HHHCCCCCEEEEEEEeccccCcccCcccccCcchhccCCcccccchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHH
Confidence 788999999999999886411 0 0 00 000
Q ss_pred ----------chhhh-------------------------------------------------hhhhhccCceEEEEee
Q 047978 143 ----------LSCLV-------------------------------------------------NRAIVGDGTAALIVGA 163 (320)
Q Consensus 143 ----------~~~~~-------------------------------------------------~~~~~GDgAaA~ll~~ 163 (320)
..+.. +.+-++|||+|+||.+
T Consensus 188 ~ag~~~~ei~~~~v~~~~~~~~~~~~~~~~~~~~~D~~~r~~~~~e~l~~l~p~f~~~g~lt~~n~s~~~DGAaa~vl~s 267 (399)
T PRK09052 188 QAGEFKDEITPYEITERFPDLATGEVDVKTRTVDLDEGPRADTSLEGLAKLKPVFANKGSVTAGNSSQTSDGAGAVILVS 267 (399)
T ss_pred HcCCCCceEeeEeccccccccccCcccccceEeccCCCCCCCCCHHHHhcCCCccCCCCcEECCccCCCCCceEEEEEec
Confidence 00000 0033456666666554
Q ss_pred cCCC-CC-CCCeeEEeccCceecCCCcccccccccccceechhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHHH
Q 047978 164 CPDI-NT-ERPLFHIVPTAQTILPDSEDAIKGHFRESPLIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQI 241 (320)
Q Consensus 164 ~~~~-~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~ 241 (320)
++.. .. ..+..++.+.+..... .. ........+++.+++++|++++|+| ++=+|-......-.+
T Consensus 268 e~~a~~~g~~~~a~i~g~~~~~~~---------~~---~~~~~~~~A~~~al~~Agi~~~did--~~ei~D~f~~~~l~~ 333 (399)
T PRK09052 268 EKALKQFNLTPLARFVSFAVAGVP---------PE---IMGIGPIEAIPAALKQAGLKQDDLD--WIELNEAFAAQSLAV 333 (399)
T ss_pred HHHHHHCCCCeeEEEEEEEEeccC---------CC---ccchhHHHHHHHHHHHcCCCHHHcC--EEEeCcHHHHHHHHH
Confidence 4321 00 1122233222211000 00 0112345788999999999999973 677776655555556
Q ss_pred HHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCCCCCCceEEEEeeccchhhhheeeee
Q 047978 242 EGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEAIVLRS 314 (320)
Q Consensus 242 ~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~~l~~ 314 (320)
.+.||+.+.++-.+-. .-.+||...++=...+.+++.+... +.+ .+.+....++|...++++++.
T Consensus 334 ~e~lg~~~~~vN~~GG-~la~GHp~gasG~~~~~~~~~~L~~----~~~---~~g~~~~c~~gg~g~a~~~e~ 398 (399)
T PRK09052 334 IRDLGLDPSKVNPLGG-AIALGHPLGATGAIRTATVVHGLRR----TNL---KYGMVTMCVGTGMGAAGIFER 398 (399)
T ss_pred HHHhCCCCcccCCCCc-hhhcCchHHHHHHHHHHHHHHHHHh----cCC---CeEEEEEcccCCceeEEEEEe
Confidence 7889987666533200 1257999999888888877776321 122 455555555555555566653
No 56
>PRK05790 putative acyltransferase; Provisional
Probab=99.30 E-value=1.2e-10 Score=110.62 Aligned_cols=240 Identities=16% Similarity=0.115 Sum_probs=151.9
Q ss_pred ccchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCC-CCCCCHHHHHHHHcCCCc-c-------hhhhhhh--------h
Q 047978 53 VPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSG-VDMPGADYQLTKLLGLKP-S-------VKRVMLT--------A 115 (320)
Q Consensus 53 ~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~-~~~p~~a~~l~~~LGl~~-~-------~c~~~l~--------l 115 (320)
+++..+|+.+|+++||+++|++++|||.||++++++ ...+..+..++..+|++. . .|+++++ +
T Consensus 23 ~~~~~~La~~A~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~gl~~~~~~~~v~~~Casg~~al~~A~~~I 102 (393)
T PRK05790 23 DVSAVELGAIVIKAALERAGVPPEQVDEVIMGQVLQAGAGQNPARQAALKAGLPVEVPALTINKVCGSGLKAVALAAQAI 102 (393)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCeEEEEEecCCCCCCcHHHHHHHHcCCCCCCceeeecccchHHHHHHHHHHHHH
Confidence 588999999999999999999999999999988776 334444555666778763 1 2766543 7
Q ss_pred hcCCCCeEEEEEeeccccc-c----------------cC------CCCC----C---------------c----------
Q 047978 116 ESNAGARVLVVCSEITVGT-F----------------RA------PSDE----N---------------L---------- 143 (320)
Q Consensus 116 ~~~~~~~~LVv~~e~~s~~-~----------------~~------~~~~----~---------------~---------- 143 (320)
++|..+++||+++|..|.. . .+ +.+. . +
T Consensus 103 ~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~y~~~yG~tre~la~vav~~ 182 (393)
T PRK05790 103 RAGDADIVVAGGQESMSQAPHVLPGSRWGQKMGDVELVDTMIHDGLTDAFNGYHMGITAENLAEQYGITREEQDEFALAS 182 (393)
T ss_pred HcCCCCEEEEEeeeccccCcccccccccccccCcchhhhhhcccccccccCCCCHHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 8899999999999976420 0 00 0000 0 0
Q ss_pred -----hhhh------------------------------------------------------hhhhhccCceEEEEeec
Q 047978 144 -----SCLV------------------------------------------------------NRAIVGDGTAALIVGAC 164 (320)
Q Consensus 144 -----~~~~------------------------------------------------------~~~~~GDgAaA~ll~~~ 164 (320)
.+.. ..+.++|||+|+||+++
T Consensus 183 ~~~A~~~~~~g~~~~~i~P~~~~~~~~~~~~~~~d~~~~~~~~~e~l~~~~~v~~~~g~lt~~d~~~~~DGAaavvl~s~ 262 (393)
T PRK05790 183 QQKAEAAIKAGRFKDEIVPVTIKQRKGDPVVVDTDEHPRPDTTAESLAKLRPAFDKDGTVTAGNASGINDGAAAVVVMSE 262 (393)
T ss_pred HHHHHHHHHcCCCcceEeeEEecCCCCCceEecCCCCCCCCCCHHHHhCCCCccCCCCCEeCCcCCCCCCceEEEEEecH
Confidence 0000 12345788888888765
Q ss_pred CCC-CC-CCCeeEEeccCceecCCCcccccccccccceechhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHHHH
Q 047978 165 PDI-NT-ERPLFHIVPTAQTILPDSEDAIKGHFRESPLIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIE 242 (320)
Q Consensus 165 ~~~-~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~ 242 (320)
+.. .. .++.-++...+....... .........++.+++++|++++|+| ++-+|-......-.+.
T Consensus 263 e~a~~~~~~~~~~I~g~~~~~~~~~------------~~~~~~~~a~~~a~~~Agi~~~did--~~e~~d~f~~~~l~~~ 328 (393)
T PRK05790 263 AKAKELGLTPLARIVSYAVAGVDPA------------IMGIGPVPAIRKALEKAGWSLADLD--LIEINEAFAAQALAVE 328 (393)
T ss_pred HHHHHCCCCeeEEEEEEEEccCCCC------------ccchhHHHHHHHHHHHcCCCHHHCC--EEEeCcHHHHHHHHHH
Confidence 432 11 112223333222110000 0012334688999999999999973 6777776554455567
Q ss_pred HHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCCCCCCceEEEEeeccchhhhheeeee
Q 047978 243 GKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEAIVLRS 314 (320)
Q Consensus 243 ~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~~l~~ 314 (320)
+.||+.+..+-.+ --.--+||...|+=...+.+++.+..+ +.+ .+.|....|+|...++++++.
T Consensus 329 e~lg~~~~pvN~~-GG~l~~Ghp~gatG~~~~~e~~~qL~~----~~~---~~gl~~~~~~~g~g~~~~~e~ 392 (393)
T PRK05790 329 KELGLDPEKVNVN-GGAIALGHPIGASGARILVTLLHEMKR----RGA---KKGLATLCIGGGQGVALIVER 392 (393)
T ss_pred HHhCCChhhcCCC-cchhhhCcchhhhHHHHHHHHHHHHHh----cCC---CeEEEEEeccCCceeEEEEEc
Confidence 8899876555332 123447999999988888888876331 122 567777777777777788775
No 57
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=99.28 E-value=2.2e-10 Score=108.67 Aligned_cols=224 Identities=14% Similarity=0.030 Sum_probs=143.1
Q ss_pred cccchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCC-CCCCCHHHHHHHHcCCCcc-------hhhhhhh--------h
Q 047978 52 LVPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSG-VDMPGADYQLTKLLGLKPS-------VKRVMLT--------A 115 (320)
Q Consensus 52 ~~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~-~~~p~~a~~l~~~LGl~~~-------~c~~~l~--------l 115 (320)
++++..+|+.+|+++||+++|++++|||.||++++++ ...+..+..++..||+++. .|++++. +
T Consensus 17 ~~~~~~eLa~~A~~~AL~dAgi~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~~~~v~~~casg~~al~~A~~~I 96 (385)
T PRK12578 17 DDVSVQELAWESIKEALNDAGVSQTDIELVVVGSTAYRGIELYPAPIVAEYSGLTGKVPLRVEAMCATGLAASLTAYTAV 96 (385)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccCChHHHHHHHhCCCCCCeeEEeccCHHHHHHHHHHHHHH
Confidence 4778899999999999999999999999999988776 2223346889999999763 2665433 7
Q ss_pred hcCCCCeEEEEEeecccccc-c----------------CCCCC--C----------------------------------
Q 047978 116 ESNAGARVLVVCSEITVGTF-R----------------APSDE--N---------------------------------- 142 (320)
Q Consensus 116 ~~~~~~~~LVv~~e~~s~~~-~----------------~~~~~--~---------------------------------- 142 (320)
++|..+++||+++|..+... . .|... .
T Consensus 97 ~sG~~~~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~a~~a~~~m~~~g~t~e~~a~va~~~~~~A~~ 176 (385)
T PRK12578 97 ASGLVDMAIAVGVDKMTEVDTSTSLAIGGRGGNYQWEYHFYGTTFPTYYALYATRHMAVYGTTEEQMALVSVKAHKYGAM 176 (385)
T ss_pred HCCCCCEEEEEEEeecccCcccchhhhcccccccccccccCCCChHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHhc
Confidence 88999999999999865310 0 01100 0
Q ss_pred -----------ch------------hhhhhhhhccCceEEEEeecCCC-CCC-CCeeEEeccCceecCCCcccccccccc
Q 047978 143 -----------LS------------CLVNRAIVGDGTAALIVGACPDI-NTE-RPLFHIVPTAQTILPDSEDAIKGHFRE 197 (320)
Q Consensus 143 -----------~~------------~~~~~~~~GDgAaA~ll~~~~~~-~~~-~~~~~~~~~~~~~~p~~~~~~~~~~~~ 197 (320)
.+ .....+.++|||+|+||.+++.. ... ++...+.+.+....+... ....
T Consensus 177 np~a~~~~~i~~e~v~~s~~i~~Pl~~~d~~~~~DGAaA~vl~s~e~A~~l~~~~~~~I~g~g~~~~~~~~-----~~~~ 251 (385)
T PRK12578 177 NPKAHFQKPVTVEEVLKSRAISWPIKLLDSCPISDGSATAIFASEEKVKELKIDSPVWITGIGYANDYAYV-----ARRG 251 (385)
T ss_pred CChhhcCCCCCHHHHhcCCccCCCccHhhcCCcCCCeEEEEEecHHHHHhcCCCCCeEEEEEEEecCcccc-----cccc
Confidence 00 01233456899999999876532 111 122344433322111100 0000
Q ss_pred cceechhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHHHHHHcCCCcc----------------hhhhhH-HHHh
Q 047978 198 SPLIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKT----------------KLRETR-HVLS 260 (320)
Q Consensus 198 ~g~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e----------------~~~~~~-~~~~ 260 (320)
+-........+++.+++++|++++||| ++-+|-......-...+.||+.+. +++.|. -=.-
T Consensus 252 ~~~~~~~~~~a~~~al~~Agi~~~DiD--~~ei~d~ft~~~l~~le~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG~l 329 (385)
T PRK12578 252 EWVGFKATQLAARQAYNMAKVTPNDIE--VATVHDAFTIAEIMGYEDLGFTEKGKGGKFIEEGQSEKGGKVGVNLFGGLK 329 (385)
T ss_pred cccccHHHHHHHHHHHHHcCCCHHHCC--EEEecCcChHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeeCCCCCcc
Confidence 001122345788999999999999973 788998887777778899998752 112110 0022
Q ss_pred ccCCcccchHHHHHHHHHHhch
Q 047978 261 EYGNMASATVLFVLDEMRKRSV 282 (320)
Q Consensus 261 ~~Gn~~sasi~~~L~~~~~~~~ 282 (320)
-+||...|+=+..+.+++.+..
T Consensus 330 a~GhP~gatG~~~v~e~~~qLr 351 (385)
T PRK12578 330 AKGHPLGATGLSMIYEITKQLR 351 (385)
T ss_pred cCCCCccHHHHHHHHHHHHHHh
Confidence 3699888887778888777643
No 58
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=99.26 E-value=2.1e-10 Score=109.28 Aligned_cols=80 Identities=14% Similarity=0.038 Sum_probs=69.3
Q ss_pred ccchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCC-CCCCCHHHHHHHHcCCCc-c-------hhhhhhh--------h
Q 047978 53 VPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSG-VDMPGADYQLTKLLGLKP-S-------VKRVMLT--------A 115 (320)
Q Consensus 53 ~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~-~~~p~~a~~l~~~LGl~~-~-------~c~~~l~--------l 115 (320)
+++..+|+.+|++++|+++|++++|||.||++++++ +..|..+..++..+|++. . .|++++. +
T Consensus 23 ~~~~~eLa~~A~~~AL~~agl~~~dID~vv~g~~~~~~~~~~~a~~va~~~Gl~~~~p~~~V~~~CaSg~~Al~~A~~~I 102 (404)
T PRK06205 23 DVPAEELAATVIRALVERTGIDPARIDDVIFGQGYPNGEAPAIGRVAALDAGLPVTVPGMQLDRRCGSGLQAVITAAMQV 102 (404)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCceeehhhhhhHHHHHHHHHHHHH
Confidence 688999999999999999999999999999999888 666777888999999974 2 2765443 7
Q ss_pred hcCCCCeEEEEEeeccc
Q 047978 116 ESNAGARVLVVCSEITV 132 (320)
Q Consensus 116 ~~~~~~~~LVv~~e~~s 132 (320)
++|..+.+||++.|..+
T Consensus 103 ~sG~~d~vLv~G~E~ms 119 (404)
T PRK06205 103 QTGAADVVIAGGAESMS 119 (404)
T ss_pred HcCCCCEEEEeeehhhc
Confidence 89999999999999876
No 59
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=99.25 E-value=3.7e-10 Score=106.95 Aligned_cols=247 Identities=16% Similarity=0.117 Sum_probs=147.8
Q ss_pred cccchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCC-CC--CCCHHHHHHHHcCCCcch-------hhhhhh-------
Q 047978 52 LVPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSG-VD--MPGADYQLTKLLGLKPSV-------KRVMLT------- 114 (320)
Q Consensus 52 ~~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~-~~--~p~~a~~l~~~LGl~~~~-------c~~~l~------- 114 (320)
++++..+|+.+|+++||+++|++++|||.||+++ ++ +. .+..+..|++.||+++.. |++...
T Consensus 20 ~~~s~~eL~~eAa~~Al~dAgl~~~dID~iv~~~-~~~~~~~~~~~~~~va~~LGl~~~~~~~v~~~casg~~al~~A~~ 98 (386)
T PRK08313 20 QDVSMAGLVREAIDRALADAGLTWDDIDAVVVGK-APDFFEGVMMPELFLADALGATGKPLIRVHTAGSVGGSTAVVAAS 98 (386)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEec-cccccccccCchHHHHHhcCCCCCceEEEeccCHHHHHHHHHHHH
Confidence 4678899999999999999999999999999887 44 21 112337899999997532 543221
Q ss_pred -hhcCCCCeEEEEEeeccccc-----------ccCCCC------------------------------------------
Q 047978 115 -AESNAGARVLVVCSEITVGT-----------FRAPSD------------------------------------------ 140 (320)
Q Consensus 115 -l~~~~~~~~LVv~~e~~s~~-----------~~~~~~------------------------------------------ 140 (320)
+++|..++||||++|+.+.. |..|..
T Consensus 99 ~I~sG~~~~vLVvg~e~~s~~~~~~~~~~~~~~~~~~g~~~~~~~al~a~~ym~~~G~~~e~la~vav~~~~~A~~NP~A 178 (386)
T PRK08313 99 LVQSGVYRRVLAVAWEKQSESNAMWALSIPVPFTKPVGAGAGGYFAPHVRAYIRRSGAPEHIGAMVAVKDRLNGAKNPYA 178 (386)
T ss_pred HHHCCCCCEEEEEEEEEccCCccccccccccccccccccchHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHccCcHH
Confidence 78999999999999976421 000100
Q ss_pred ------CCch------------hhhhhhhhccCceEEEEeecCCC-CC-CCCeeEEeccCceecCCCcccccccccccce
Q 047978 141 ------ENLS------------CLVNRAIVGDGTAALIVGACPDI-NT-ERPLFHIVPTAQTILPDSEDAIKGHFRESPL 200 (320)
Q Consensus 141 ------~~~~------------~~~~~~~~GDgAaA~ll~~~~~~-~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~ 200 (320)
.+.+ .+..++.++|||+|+||..++.. .. ..+...+.+.+....|..- .-++. .
T Consensus 179 ~~r~~~~t~e~v~~s~~ia~Pl~~~d~~~~~DGAaAvvl~s~e~a~~l~~~~~~~I~g~~~~~~~~~~-----~~~~~-~ 252 (386)
T PRK08313 179 HLHQPDITLEKVMASQMLWDPIRFDETCPSSDGACAVVIGDEEAADAAAGRPVAWIHGTAMRTEPLAF-----AGRDQ-V 252 (386)
T ss_pred hcCCCCCCHHHHhcCCcccCCCchhccCCCCCceEEEEEecHHHHHhcCCCCCeEEEEEEEEecCccc-----ccccc-c
Confidence 0000 11234566899999999876432 11 1122233333222112110 00000 1
Q ss_pred echhHHHHHHHHhhhcCCC--CCCCCceEEEEcCCChhHHHHHHHHcCCCcc----------------hhhhhHHHHhcc
Q 047978 201 IADNIDKFLAESFDQVSLN--DHDWNSLFWMMHPIGPAVLDQIEGKLGLEKT----------------KLRETRHVLSEY 262 (320)
Q Consensus 201 ~~~~~~~~i~~~l~~~g~~--~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e----------------~~~~~~~~~~~~ 262 (320)
.........+.+++++|++ ++|+| .+=+|-......-...+.||+.++ +++.|..=...-
T Consensus 253 ~~~~~~~a~~~a~~~Agi~~p~~Did--~~el~d~F~~~~~~~~e~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG~l~ 330 (386)
T PRK08313 253 NPQAGRDAAAALWKAAGITDPRDEID--VAEIYVPFSWFEPMWLENLGFAPEGEGWKLTEAGETAIGGRLPVNPSGGVLS 330 (386)
T ss_pred ccHHHHHHHHHHHHHcCCCCChhhCC--EEEeccCChHHHHHHHHHcCCCCCCchHHHHHCCCcCCCCCccccCCCcccc
Confidence 1244557889999999998 68873 788888887777778899998865 222210001111
Q ss_pred CCcccchHHHHHHHHHHhchhc-C--CCCCCCCCceEEEEeeccchhhhhe
Q 047978 263 GNMASATVLFVLDEMRKRSVEE-G--KATTGEELEWGVLLGFEAGLTVEAI 310 (320)
Q Consensus 263 Gn~~sasi~~~L~~~~~~~~~~-g--~l~~G~~~d~vll~~~G~G~~~~a~ 310 (320)
||-..++=+..+.++..+..++ | .++ + .++.|..+.|.+...+.+
T Consensus 331 g~p~gatG~~~~~e~~~qlrG~ag~rQv~-~--a~~~l~~~~Gg~~~~~~~ 378 (386)
T PRK08313 331 SNPIGASGMIRFAEAALQVMGKAGEHQVD-G--ARKALGHAYGGGSQFFSM 378 (386)
T ss_pred cCCCcHHHHHHHHHHHHHhcccccCCcCC-C--ccEEEEeccCCcceEEEE
Confidence 6655556677777776664421 1 122 2 266777777644333333
No 60
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=99.24 E-value=4.1e-10 Score=106.83 Aligned_cols=82 Identities=13% Similarity=0.010 Sum_probs=67.4
Q ss_pred cccchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCC-CCC-CCHHHHHHHHcCCCcc--------hhhhhhh-------
Q 047978 52 LVPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSG-VDM-PGADYQLTKLLGLKPS--------VKRVMLT------- 114 (320)
Q Consensus 52 ~~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~-~~~-p~~a~~l~~~LGl~~~--------~c~~~l~------- 114 (320)
.+.++.+|+.+|++++|+++|++|++||.||++++++ ... +..+......+|++.. .|+++++
T Consensus 24 ~~~~~~dLa~~A~~~al~~agi~p~~ID~vi~G~~~~~~~~~~~~~r~a~~~~Gl~~~~pa~~Vn~aCaSg~~Ai~~A~~ 103 (402)
T PRK08242 24 HEVKPVRLAAGLLEALRDRNGLDTAAVDDVVLGCVTPVGDQGADIARTAVLAAGLPETVPGVQINRFCASGLEAVNLAAA 103 (402)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccccccHHHHHHHHcCCCCCCCeEEEcchhhhHHHHHHHHHH
Confidence 3678899999999999999999999999999999988 433 3455666678898542 3777654
Q ss_pred -hhcCCCCeEEEEEeecccc
Q 047978 115 -AESNAGARVLVVCSEITVG 133 (320)
Q Consensus 115 -l~~~~~~~~LVv~~e~~s~ 133 (320)
+++|..+.+|++++|..|+
T Consensus 104 ~I~sG~~d~vLv~G~E~mS~ 123 (402)
T PRK08242 104 KVRSGWDDLVIAGGVESMSR 123 (402)
T ss_pred HHHcCCCCEEEEEEEEccCC
Confidence 7889999999999999875
No 61
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=99.23 E-value=2.9e-10 Score=107.92 Aligned_cols=82 Identities=15% Similarity=0.058 Sum_probs=67.2
Q ss_pred cccchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCC-CCCCCHHHHHHHHcCCCc-c-------hhhhhhh--------
Q 047978 52 LVPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSG-VDMPGADYQLTKLLGLKP-S-------VKRVMLT-------- 114 (320)
Q Consensus 52 ~~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~-~~~p~~a~~l~~~LGl~~-~-------~c~~~l~-------- 114 (320)
.+++..+|+.+|++++|+++|++|+|||.||+++.++ ...+..+..++..+|++. . .|+++++
T Consensus 22 ~~~~~~eLa~~A~~~aL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~Gl~~~~p~~~V~~~CaSg~~Al~~A~~~ 101 (393)
T PRK08235 22 KDVKATELGGIAIKEALERANVSAEDVEEVIMGTVLQGGQGQIPSRQAARAAGIPWEVQTETVNKVCASGLRAVTLADQI 101 (393)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCCHHHHHHHHcCCCCCcceeehhhhhhHHHHHHHHHHHH
Confidence 3788999999999999999999999999999998876 223445567889999963 2 2766543
Q ss_pred hhcCCCCeEEEEEeecccc
Q 047978 115 AESNAGARVLVVCSEITVG 133 (320)
Q Consensus 115 l~~~~~~~~LVv~~e~~s~ 133 (320)
+++|..+.+||+++|+.|.
T Consensus 102 I~sG~~d~vLvvG~E~ms~ 120 (393)
T PRK08235 102 IRAGDASVIVAGGMESMSN 120 (393)
T ss_pred HHCCCCCEEEEEeeecccc
Confidence 7889999999999998874
No 62
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=99.22 E-value=2.8e-10 Score=107.90 Aligned_cols=82 Identities=13% Similarity=0.049 Sum_probs=69.5
Q ss_pred cccchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCC-CCCCC-HHHHHHHHcCCCcc--------hhhhhhh-------
Q 047978 52 LVPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSG-VDMPG-ADYQLTKLLGLKPS--------VKRVMLT------- 114 (320)
Q Consensus 52 ~~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~-~~~p~-~a~~l~~~LGl~~~--------~c~~~l~------- 114 (320)
.+++..+|+.+|++++|+++|++|+|||.||++++++ ...|+ .+..++..+|++.. .|++.++
T Consensus 23 ~~~~~~dL~~~A~~~aL~~agi~~~~ID~vi~G~~~~~~~~~~~~a~~i~~~lGl~~~~p~~~V~~aCaSg~~Al~~A~~ 102 (392)
T PRK07108 23 NMTHGATLGGHVVQHAVERAKLDPAEVEDVIMGCANPEGATGANIARQIALRAGLPVTVPGMTVNRFCSSGLQTIALAAQ 102 (392)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCcEEEEEeecccccccHHHHHHHHHcCCCCCCceeeecchhhHHHHHHHHHHH
Confidence 4678899999999999999999999999999999988 55554 78899999998742 2766543
Q ss_pred -hhcCCCCeEEEEEeecccc
Q 047978 115 -AESNAGARVLVVCSEITVG 133 (320)
Q Consensus 115 -l~~~~~~~~LVv~~e~~s~ 133 (320)
+++|..+.+|+++.|+.|.
T Consensus 103 ~I~sG~~d~vlagGvE~ms~ 122 (392)
T PRK07108 103 RVIAGEGDVFVAGGVESISC 122 (392)
T ss_pred HHHCCCCCEEEEEEEeccCC
Confidence 7889999999999999874
No 63
>PRK06059 lipid-transfer protein; Provisional
Probab=99.19 E-value=1.4e-09 Score=103.69 Aligned_cols=254 Identities=14% Similarity=0.096 Sum_probs=150.8
Q ss_pred ccchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCC--CCCCCHHHHHHHHcCCCcc-------hhhhhhh--------h
Q 047978 53 VPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSG--VDMPGADYQLTKLLGLKPS-------VKRVMLT--------A 115 (320)
Q Consensus 53 ~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~--~~~p~~a~~l~~~LGl~~~-------~c~~~l~--------l 115 (320)
+++..+|+.+|+++||+++|++++|||.||++++.+ +..+..+..++..||+++. .|++++. +
T Consensus 20 ~~~~~~La~~A~~~Al~dAgl~~~dId~vi~~~~~~~~~~~~~~a~~va~~lG~~~~~~~~v~~~Casg~~al~~A~~~I 99 (399)
T PRK06059 20 GRDFVEYGVVAARAALADAGLDWRDVQLVVGADTIRNGYPGFVAGATFAQALGWNGAPVSSSYAACASGSQALQSARAQI 99 (399)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCccCCccHHHHHHHHhCCCCCceecccchhHHHHHHHHHHHHHH
Confidence 467799999999999999999999999999877665 3345567899999999763 2766533 7
Q ss_pred hcCCCCeEEEEEeecccccc---------cC-------CCCCC-------------------------------------
Q 047978 116 ESNAGARVLVVCSEITVGTF---------RA-------PSDEN------------------------------------- 142 (320)
Q Consensus 116 ~~~~~~~~LVv~~e~~s~~~---------~~-------~~~~~------------------------------------- 142 (320)
+++..+++||+++|..+..+ .+ |..-.
T Consensus 100 ~sG~~~~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~al~a~~~~~~yg~s~e~~a~v~~~~~~~a~~N 179 (399)
T PRK06059 100 LAGLCDVALVVGADTTPKGFFAPVGGERPDDPDWLRFHLIGATNPVYFALLARRRMDLYGATVEDFAQVKVKNARHGLLN 179 (399)
T ss_pred HCCCCCEEEEEEEcccCCCCCcccccccccccchhhcccCCCccHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHccC
Confidence 88999999999999865310 00 00000
Q ss_pred ----------chh------------hhhhhhhccCceEEEEeecCCC-CC---CCCeeEEeccCce--ecCCCc-ccccc
Q 047978 143 ----------LSC------------LVNRAIVGDGTAALIVGACPDI-NT---ERPLFHIVPTAQT--ILPDSE-DAIKG 193 (320)
Q Consensus 143 ----------~~~------------~~~~~~~GDgAaA~ll~~~~~~-~~---~~~~~~~~~~~~~--~~p~~~-~~~~~ 193 (320)
.++ +...+..+|||+|+||.+++.. .. ..+...+...+.. ..+... +..
T Consensus 180 p~A~~r~~~t~e~v~~s~~i~~Pl~~~d~~~~~DGAaA~vl~s~~~A~~l~~~~~~~v~I~g~~~~~~~~~~~~~~~~-- 257 (399)
T PRK06059 180 PNARYRKEVTVEDVLASPVVSDPLRLLDICATSDGAAALIVASKSFARRHLGSVAGVPSVRAISTVTPRYPQHLPELP-- 257 (399)
T ss_pred cHhhcCCCCCHHHHhcCCcccCCCchhhcCCCCCceEEEEEecHHHHHhhccccCCceEEEEEEEecccccccccccc--
Confidence 000 1223345799999999876531 11 1122233322211 111000 000
Q ss_pred ccc-----ccc-eechhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHHHHHHcCCCcc----hh-----------
Q 047978 194 HFR-----ESP-LIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKT----KL----------- 252 (320)
Q Consensus 194 ~~~-----~~g-~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e----~~----------- 252 (320)
.+. ... .........++.+++++|++++|+| .+=+|-......-...+.||+.+. ++
T Consensus 258 ~~~~~~~~~~~a~~~~~~~~a~~~a~~~agl~~~Did--~~El~d~f~~~~l~~~e~lGl~~~G~~~~~~~~G~~~~~G~ 335 (399)
T PRK06059 258 DIATDSTAAVPAPERVFKDQILDAAYAEAGIGPEDLS--LAEVYDLSTALELDWYEHLGLCPKGEAEALLRSGATTLGGR 335 (399)
T ss_pred cccccccccccccccHHHHHHHHHHHHHcCCCHHHCc--EEeecccChHHHHHHHHHcCCCCCCcHHHHHHCCCccCCCC
Confidence 011 000 0112234678999999999999973 777887765554445689998752 11
Q ss_pred -hhh-HHHHhccCCcccchHHHHHHHHHHhchhcC---CCCCCCCCceEEEEeeccchhhhheeee
Q 047978 253 -RET-RHVLSEYGNMASATVLFVLDEMRKRSVEEG---KATTGEELEWGVLLGFEAGLTVEAIVLR 313 (320)
Q Consensus 253 -~~~-~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g---~l~~G~~~d~vll~~~G~G~~~~a~~l~ 313 (320)
+.| .-=.--+||...++=...+.+++.+..++. +++ | -++.+....|.|...++++|+
T Consensus 336 ~pvN~~GG~la~Ghp~gatG~~~~~e~~~qLrg~ag~~Qv~-~--a~~gl~~~~g~~g~~~~~~l~ 398 (399)
T PRK06059 336 IPVNPSGGLACFGEAIPAQAIAQVCELTWQLRGQAGGRQVE-G--ARVGITANQGLFGHGSSVIVA 398 (399)
T ss_pred eeecCCCccccCCccCCccHHHHHHHHHHHhccCcCCccCC-C--ccEEEEeccCCcccceEEEec
Confidence 111 001223699998888888888877643210 112 2 145555444544455556654
No 64
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=99.17 E-value=9.4e-10 Score=105.00 Aligned_cols=243 Identities=14% Similarity=0.112 Sum_probs=144.4
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCcCE----EEEEeeCC----------------------CC----CC-CHHHHHHHHcCC
Q 047978 56 VPKLGKEAVSKAIKEWGQPISKITH----LISCSVSG----------------------VD----MP-GADYQLTKLLGL 104 (320)
Q Consensus 56 ~~~la~~Aa~~aL~~ag~~~~dId~----li~~s~t~----------------------~~----~p-~~a~~l~~~LGl 104 (320)
...|+.+|+++||+++|++++++|. +++++... +. .+ ..+.+|...+|+
T Consensus 71 ~~~l~~~aa~~Al~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (407)
T TIGR03150 71 FIQYALAAAKEAVEDSGLDIEEEDAERVGVIIGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQISIRYGA 150 (407)
T ss_pred HHHHHHHHHHHHHHhcCCCcccCCccceEEEEecCCCchHHHHHHHHHHHhcCccccChhhhhcccccHHHHHHHHHhCC
Confidence 4679999999999999999999986 66665321 10 11 245678889998
Q ss_pred Ccc------hhhhhhh--------hhcCCCCeEEEEEeeccccc-----------c----------cCCCCCCchhhhhh
Q 047978 105 KPS------VKRVMLT--------AESNAGARVLVVCSEITVGT-----------F----------RAPSDENLSCLVNR 149 (320)
Q Consensus 105 ~~~------~c~~~l~--------l~~~~~~~~LVv~~e~~s~~-----------~----------~~~~~~~~~~~~~~ 149 (320)
+.. .|++.+. |++|..+.+||++.|..... + ..|-+ ....+
T Consensus 151 ~g~~~~v~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd----~~~~g 226 (407)
T TIGR03150 151 KGPNHAVVTACATGTHAIGDAFRLIQRGDADVMIAGGAEAAITPLGIAGFAAMKALSTRNDDPEKASRPFD----KDRDG 226 (407)
T ss_pred CCcccccccHHHHHHHHHHHHHHHHhcCCCCEEEEecccCcCCHHHHHHHHHhCcccCCCCCCCcCCCCCc----CCCCc
Confidence 643 2655332 78999999999999963210 0 01111 11246
Q ss_pred hhhccCceEEEEeecCCCC-C-CCCeeEEeccCceecCCCcccccccccccceechhHHHHHHHHhhhcCCCCCCCCceE
Q 047978 150 AIVGDGTAALIVGACPDIN-T-ERPLFHIVPTAQTILPDSEDAIKGHFRESPLIADNIDKFLAESFDQVSLNDHDWNSLF 227 (320)
Q Consensus 150 ~~~GDgAaA~ll~~~~~~~-~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~i~~~l~~~g~~~~d~~~~~ 227 (320)
+++||||+|+||++.+... . ......+...+......... ..... .....++++.+++++|++++|| ++
T Consensus 227 ~~~gEGAaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~----~~~~~---~~~~~~ai~~Al~~Agi~~~dI--d~ 297 (407)
T TIGR03150 227 FVMGEGAGVLVLEELEHAKARGAKIYAEIVGYGMSGDAYHIT----APAPE---GEGAARAMRAALKDAGINPEDV--DY 297 (407)
T ss_pred EEEeceEEEEEEeeHHHHHHCCCeEEEEEEEEEECCCCCCCC----CCCCC---cHHHHHHHHHHHHHcCCCHhHC--CE
Confidence 7899999999999865421 1 11122333322111000000 00111 2446688999999999999997 38
Q ss_pred EEEcCCChhH-----HHHHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCC-------------
Q 047978 228 WMMHPIGPAV-----LDQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATT------------- 289 (320)
Q Consensus 228 ~i~h~~~~~~-----~~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~------------- 289 (320)
+.+|-.+... ...+.+.++-...++..+ ..-..+||+.+|+=.+.+..++.... ++.+.|
T Consensus 298 ve~h~tgt~~~D~~E~~a~~~~~~~~~~~~~v~-s~k~~~Gh~~~AsG~~~~~~~~~~l~-~~~ipp~~~~~~~~~~~~~ 375 (407)
T TIGR03150 298 INAHGTSTPLGDKAETKAIKRVFGDHAYKLAVS-STKSMTGHLLGAAGAIEAIFTVLAIR-DGVVPPTINLDNPDPECDL 375 (407)
T ss_pred EeCcCCCCCCCCHHHHHHHHHHhccCCCCCcee-CCcchhchhHHHHHHHHHHHHHHHHh-cCCcCCCCCCCCCCCCCCc
Confidence 8899876633 233455666433333322 12344699988877766665543311 132211
Q ss_pred -------CC-CCceEEEEeeccchhhhheeee
Q 047978 290 -------GE-ELEWGVLLGFEAGLTVEAIVLR 313 (320)
Q Consensus 290 -------G~-~~d~vll~~~G~G~~~~a~~l~ 313 (320)
+. ...+++.-+||.|.+..+++++
T Consensus 376 ~~v~~~~~~~~~~~~l~~s~gfgG~n~~~vl~ 407 (407)
T TIGR03150 376 DYVPNEARERKIDYALSNSFGFGGHNASLVFK 407 (407)
T ss_pred cccCCCCccCCcCEEEEecccCCCceEEEEeC
Confidence 10 0146788889988887777763
No 65
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=99.16 E-value=8e-10 Score=105.56 Aligned_cols=240 Identities=16% Similarity=0.099 Sum_probs=145.1
Q ss_pred chHHHHHHHHHHHHHHcCCCCCC-cC----EEEEEeeCC-----------------------CCC--CCHHHHHHHHcCC
Q 047978 55 KVPKLGKEAVSKAIKEWGQPISK-IT----HLISCSVSG-----------------------VDM--PGADYQLTKLLGL 104 (320)
Q Consensus 55 ~~~~la~~Aa~~aL~~ag~~~~d-Id----~li~~s~t~-----------------------~~~--p~~a~~l~~~LGl 104 (320)
....|+..|+++||+++|+++++ ++ .+++++... ... ...+.+|+..+|+
T Consensus 71 ~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (407)
T cd00828 71 RTTLLALVATEEALADAGITDPYEVHPSEVGVVVGSGMGGLRFLRRGGKLDARAVNPYVSPKWMLSPNTVAGWVNILLLS 150 (407)
T ss_pred HHHHHHHHHHHHHHHhCCCCccccCCccCeEEEEeeccCCHHHHHHHHHHHhhccCCcccchhccccchHHHHHHHHhCc
Confidence 45678999999999999998765 33 244444311 111 4567899999999
Q ss_pred -Ccc------hhhhhhh--------hhcCCCCeEEEEEeeccccc--------------------ccCCCCCCchhhhhh
Q 047978 105 -KPS------VKRVMLT--------AESNAGARVLVVCSEITVGT--------------------FRAPSDENLSCLVNR 149 (320)
Q Consensus 105 -~~~------~c~~~l~--------l~~~~~~~~LVv~~e~~s~~--------------------~~~~~~~~~~~~~~~ 149 (320)
+.. .|++.++ |++|..+.+||.++|..+.. ...|-+. ...+
T Consensus 151 ~~Gp~~tv~~aCaS~~~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~f~~~~~ls~~~~~~~~~~~pfd~----~~~G 226 (407)
T cd00828 151 SHGPIKTPVGACATALEALDLAVEAIRSGKADIVVVGGVEDPLEEGLSGFANMGALSTAEEEPEEMSRPFDE----TRDG 226 (407)
T ss_pred CCCCCcCcccHHHHHHHHHHHHHHHHHcCCCCEEEEccccccChHHHHHHHHcCCCCCCCCCCCcccCCCcC----CCCc
Confidence 542 3765543 78999999999999986410 0112221 2357
Q ss_pred hhhccCceEEEEeecCCCC-C-CCCeeEEeccCceecCCCcccccccccccceechhHHHHHHHHhhhcCCCCCCCCceE
Q 047978 150 AIVGDGTAALIVGACPDIN-T-ERPLFHIVPTAQTILPDSEDAIKGHFRESPLIADNIDKFLAESFDQVSLNDHDWNSLF 227 (320)
Q Consensus 150 ~~~GDgAaA~ll~~~~~~~-~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~i~~~l~~~g~~~~d~~~~~ 227 (320)
+++||||+++||++.+... . ...+-++...+....+... ....+ .+...++++.+++++|++++|+ ++
T Consensus 227 ~~~gEGAaalvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~-----~~~~~---~~~~~~a~~~Al~~Agi~~~dI--d~ 296 (407)
T cd00828 227 FVEAEGAGVLVLERAELALARGAPIYGRVAGTASTTDGAGR-----SVPAG---GKGIARAIRTALAKAGLSLDDL--DV 296 (407)
T ss_pred EEeecceEEEEEeeHHHHHHCCCeEEEEEEEEEeccCCCCC-----CCCCC---hHHHHHHHHHHHHHcCCCHHHc--CE
Confidence 8999999999999865421 0 1112223222111111100 00001 3667789999999999999986 38
Q ss_pred EEEcCCChhHHHH-----HHHHcCCC--cchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCCC----------
Q 047978 228 WMMHPIGPAVLDQ-----IEGKLGLE--KTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTG---------- 290 (320)
Q Consensus 228 ~i~h~~~~~~~~~-----~~~~lg~~--~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G---------- 290 (320)
+..|-.+....+. +.+.++-. +-.+.. +-..+||+.+|+-++.|...+... +++.+.|-
T Consensus 297 i~~hgtgt~~~D~~E~~ai~~~~~~~~~~~~v~s---~K~~~Gh~~~Asg~~~l~~~~~~l-~~~~ipp~~~~~~~~~~~ 372 (407)
T cd00828 297 ISAHGTSTPANDVAESRAIAEVAGALGAPLPVTA---QKALFGHSKGAAGALQLIGALQSL-EHGLIPPTANLDDVDPDV 372 (407)
T ss_pred EecccccCccccHHHHHHHHHHHhccCCCceeec---ccchhccchhhhhHHHHHHHHHHH-hcCccCCCCCCCCCCccc
Confidence 8999766543322 23334321 122322 466799999999888887654321 11333210
Q ss_pred ----------C-C--CceEEEEeeccchhhhheee
Q 047978 291 ----------E-E--LEWGVLLGFEAGLTVEAIVL 312 (320)
Q Consensus 291 ----------~-~--~d~vll~~~G~G~~~~a~~l 312 (320)
. . .++++.-+||.|.+..++++
T Consensus 373 ~~~~~~~~~~~~~~~~~~al~~s~gfgG~n~~lv~ 407 (407)
T cd00828 373 EHLSVVGLSRDLNLKVRAALVNAFGFGGSNAALVL 407 (407)
T ss_pred ccccccCcCccCCCCccEEEEecccCCCcceEEEC
Confidence 0 0 04677888998877766653
No 66
>PRK06158 thiolase; Provisional
Probab=99.15 E-value=2e-09 Score=102.03 Aligned_cols=236 Identities=15% Similarity=0.150 Sum_probs=141.1
Q ss_pred cccchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcch-------hhhhhh--------hh
Q 047978 52 LVPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPSV-------KRVMLT--------AE 116 (320)
Q Consensus 52 ~~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~~-------c~~~l~--------l~ 116 (320)
++++..+|+.+|+++||+++|++++|||.||+++.. +..|+ ..|++.||+++.. |+++++ ++
T Consensus 24 ~~~t~~eL~~eA~~~Al~dAgl~~~dID~iv~~~~~-~~~~~--~~la~~lGl~~~~~~~~~~g~~s~~~al~~A~~~I~ 100 (384)
T PRK06158 24 PGLSAMELLAQAAHRALADAGLTMADVDGLFTASPD-DALWG--LSVAEYLGIRPRFVDGTMIGGSSFLAHLLPAALALE 100 (384)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCC-CCCcH--HHHHHHcCCCCeeeccccCccHHHHHHHHHHHHHHH
Confidence 478899999999999999999999999999987643 33443 5799999997642 565532 78
Q ss_pred cCCCCeEEEEEee-cccc-----c------ccCCCCC-------------------------------------------
Q 047978 117 SNAGARVLVVCSE-ITVG-----T------FRAPSDE------------------------------------------- 141 (320)
Q Consensus 117 ~~~~~~~LVv~~e-~~s~-----~------~~~~~~~------------------------------------------- 141 (320)
+|..++|||+.++ ..+. . +..|...
T Consensus 101 sG~~d~vLV~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~al~a~~ym~~yG~t~e~~a~vav~~~~~a~~NP~A~ 180 (384)
T PRK06158 101 AGLCDVALICYGSNQRSAGGKLRSMLDPQPYEAPYKPVNPVSAYALAAARHMHQYGTTREQLAEVAVAARQWAQLNPEAF 180 (384)
T ss_pred cCCCCEEEEeeccccccCcccccccccccchhcccCCCCcHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHhcCchhh
Confidence 8999999998443 3221 0 0001000
Q ss_pred -----Cchh------------hhhhhhhccCceEEEEeecCCC-CC-CCCeeEEeccCceecCCCcccccccccccceec
Q 047978 142 -----NLSC------------LVNRAIVGDGTAALIVGACPDI-NT-ERPLFHIVPTAQTILPDSEDAIKGHFRESPLIA 202 (320)
Q Consensus 142 -----~~~~------------~~~~~~~GDgAaA~ll~~~~~~-~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~ 202 (320)
+.++ +..++..+|||+|+||.+++.. .. .++ ..+...+........ .-.. .+..
T Consensus 181 ~~~~~t~e~vl~s~~ia~Pl~~~d~~~~~DGAaAvVL~s~e~A~~l~~~~-v~i~g~~~~~~~~~~-----~~~~-~~~~ 253 (384)
T PRK06158 181 MRDPLTIDDVLAARMVSDPLSVRDCCLVTDGAGAVVMVRADRARDLPRPP-VYVLGAAAATWHRQI-----SSMP-DLTV 253 (384)
T ss_pred hCCCCCHHHHhcCCccCCCCchhhcCCccCCeEEEEEecHHHHhhcCCCc-EEEEEEEEecCCccc-----cccc-chhh
Confidence 0011 2334568999999999976532 11 122 233332211111100 0000 0112
Q ss_pred hhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHHHHHHcCCCcc----------------hhhhh-HHHHhccCCc
Q 047978 203 DNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKT----------------KLRET-RHVLSEYGNM 265 (320)
Q Consensus 203 ~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e----------------~~~~~-~~~~~~~Gn~ 265 (320)
.....+++.+++++|++++|+| ++=+|-......-...+.||+.+. +++.| --=+--+||.
T Consensus 254 ~~~~~aa~~A~~~AGi~p~DId--~~ElyD~Fs~~~l~~~E~lG~~~~Ge~~~~~~~G~~~~~G~~PvN~sGG~ls~Ghp 331 (384)
T PRK06158 254 TAAAESGPRAFAMAGLTPADID--VVELYDAFTINTILFLEDLGFCAKGEGGAFVEGGRIAPGGRLPVNTNGGGLSCVHP 331 (384)
T ss_pred hHHHHHHHHHHHHcCCCHHHCc--EEEecCCchHHHHHHHHHcCCCCCCcHHHHHHCCCCccCCCccccCCChhhcCCCC
Confidence 3345788999999999999973 788888887777777899998654 12211 0002225787
Q ss_pred ccchHHHHHHHHHHhchhc-C--CCCCCCCCceEEEEeecc
Q 047978 266 ASATVLFVLDEMRKRSVEE-G--KATTGEELEWGVLLGFEA 303 (320)
Q Consensus 266 ~sasi~~~L~~~~~~~~~~-g--~l~~G~~~d~vll~~~G~ 303 (320)
.++-+..+.++..+...+ | +++.- ++.|..+.|.
T Consensus 332 -gatG~~~~~E~~~QLrg~ag~rQv~~a---~~gl~~~~Gg 368 (384)
T PRK06158 332 -GMYGLFLLIEAVRQLRGEAGERQVAGA---EVALAHGNGG 368 (384)
T ss_pred -chhhHHHHHHHHHHHcCCCCCCcCCCC---CEEEEECCCC
Confidence 456666666666653321 1 12222 5566666664
No 67
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=99.15 E-value=1.3e-09 Score=103.89 Aligned_cols=255 Identities=13% Similarity=0.066 Sum_probs=146.1
Q ss_pred HHhhhcccchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCC-CCC-----CCHHHHHHHHc-CCCc----chhhhhhh-
Q 047978 47 KRMYILVPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSG-VDM-----PGADYQLTKLL-GLKP----SVKRVMLT- 114 (320)
Q Consensus 47 r~~~~~~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~-~~~-----p~~a~~l~~~L-Gl~~----~~c~~~l~- 114 (320)
|++..++++..+|+.+|++++|+++|++++|||.+|++++++ +.. +.....++..+ |++. ..|+++++
T Consensus 17 r~~~~~~~s~~eLa~eA~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~Casg~~a 96 (403)
T PRK06289 17 RNWTKEGRDFADLTREVVDGTLAAAGVDADDIEVVHVGNFFGELFAGQGHLGAMPATVHPALWGVPASRHEAACASGSVA 96 (403)
T ss_pred cccCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccccchHHHHHhhcCCCCceeecccccHHHHHH
Confidence 344446789999999999999999999999999999988766 322 22223222223 4422 23765442
Q ss_pred -------hhcCCCCeEEEEEeecccccc-------------cC------CCC-CC-------------------------
Q 047978 115 -------AESNAGARVLVVCSEITVGTF-------------RA------PSD-EN------------------------- 142 (320)
Q Consensus 115 -------l~~~~~~~~LVv~~e~~s~~~-------------~~------~~~-~~------------------------- 142 (320)
+++|..++|||+++|+.+... .+ |.. ..
T Consensus 97 l~~Aa~~I~sG~~~~VLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a~~y~~~yG~t~e~la~va~ 176 (403)
T PRK06289 97 TLAAMADLRAGRYDVALVVGVELMKTVPGDVAAEHLGAAAWTGHEGQDARFPWPSMFARVADEYDRRYGLDEEHLRAIAE 176 (403)
T ss_pred HHHHHHHHHcCCCCEEEEEEEEecCCCCchhhHHhhhcccccccccccCCCccHHHHHHHHHHHHHHhCCCHHHHHHHHH
Confidence 788999999999999865310 00 000 00
Q ss_pred --------------c----------hhh------------hhhhhhccCceEEEEeecCCC-CCC--CCeeEEeccCcee
Q 047978 143 --------------L----------SCL------------VNRAIVGDGTAALIVGACPDI-NTE--RPLFHIVPTAQTI 183 (320)
Q Consensus 143 --------------~----------~~~------------~~~~~~GDgAaA~ll~~~~~~-~~~--~~~~~~~~~~~~~ 183 (320)
+ ++. ..++..+|||+|+||.+++.. ... ++...+.+.+...
T Consensus 177 ~~~~~A~~NP~A~~~~~~~~~~~~~~d~~~s~~i~~Pl~~~d~~~~~DGAaA~vl~s~e~a~~l~~~~~~~~i~g~~~~~ 256 (403)
T PRK06289 177 INFANARRNPNAQTRGWAFPDEATNDDDATNPVVEGRLRRQDCSQVTDGGAGVVLASDAYLRDYADARPIPRIKGWGHRT 256 (403)
T ss_pred HHHHHHccCcHhhcCccccccccchhhhhcCCcccCCCchhhcCCCCCceeEEEEEcHHHHHHhccCCCCEEEEEEEEec
Confidence 1 010 111233699999999876532 111 1223444432221
Q ss_pred cCCCc-ccccccccccceechhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHHHHHHcCCCcc------------
Q 047978 184 LPDSE-DAIKGHFRESPLIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKT------------ 250 (320)
Q Consensus 184 ~p~~~-~~~~~~~~~~g~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e------------ 250 (320)
.+... +..+. ...+...........+.+++++|++++|+ +.+-+|-......-...+.||+.+.
T Consensus 257 ~~~~~~~~~~~-~~~~~~~~~~~~~aa~~a~~~Agi~~~Di--dv~el~D~fa~~~l~~le~lGl~~~Ge~~~~v~~G~~ 333 (403)
T PRK06289 257 APLGLEQKLDR-SAGDPYVLPHVRQAVLDAYRRAGVGLDDL--DGFEVHDCFTPSEYLAIDHIGLTGPGESWKAIENGEI 333 (403)
T ss_pred ccccccccccc-ccccccccHHHHHHHHHHHHHcCCCHHHC--eEEeeeccchHHHHHHHHHcCCCCCCcHHHHHhcCCc
Confidence 11100 00000 00000112333468889999999999997 3788898887777788899998752
Q ss_pred ----hhhhhH-HHHhccCCcccchHHHHHHHHHHhchhcC-CCC-CCCCCceEEEEeeccchh
Q 047978 251 ----KLRETR-HVLSEYGNMASATVLFVLDEMRKRSVEEG-KAT-TGEELEWGVLLGFEAGLT 306 (320)
Q Consensus 251 ----~~~~~~-~~~~~~Gn~~sasi~~~L~~~~~~~~~~g-~l~-~G~~~d~vll~~~G~G~~ 306 (320)
+++.|- --.--+||...++=+..+.+++.+..++. ..+ ++ .+..+..+.|.+..
T Consensus 334 ~~~G~lpvN~~GG~la~Ghp~gatG~~~~~e~~~QLrg~ag~~Qv~~--~~~~l~~~~gg~~~ 394 (403)
T PRK06289 334 AIGGRLPINPSGGLIGGGHPVGASGVRMLLDAAKQVTGTAGDYQVEG--AKTFGTLNIGGSTT 394 (403)
T ss_pred ccCCCeeEcCCCCccccCCCccchHHHHHHHHHHHHhccccCccCCc--hheEEEEecCcccc
Confidence 112110 00123699888888888888877644221 111 12 14555556665543
No 68
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=99.14 E-value=1.6e-09 Score=102.89 Aligned_cols=240 Identities=15% Similarity=0.127 Sum_probs=148.2
Q ss_pred ccchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCC-CCCC---CHHHHHHHHcCCC-c-----chhhhhhh--------
Q 047978 53 VPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSG-VDMP---GADYQLTKLLGLK-P-----SVKRVMLT-------- 114 (320)
Q Consensus 53 ~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~-~~~p---~~a~~l~~~LGl~-~-----~~c~~~l~-------- 114 (320)
+.+..+|+.+|++++|+++|++|+|||.+|++++.+ +..| +....++..++.+ + ..|++.++
T Consensus 29 ~~~~~~L~~~a~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~l~a~~~~~~p~~~V~~~CaSg~~ai~~A~~~ 108 (394)
T PRK06445 29 NIRPEELAAMLINRLIEKTGIKPEEIDDIITGCALQVGENWLYGGRHPIFLARLPYNIPAMAVDRQCASSLTTVSIGAME 108 (394)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCeeEEEeecCCCcccccHHHHHHHHcCCCCCCcchhhhhhhHHHHHHHHHHHHH
Confidence 578899999999999999999999999999999887 3223 3334455555521 1 12665433
Q ss_pred hhcCCCCeEEEEEeecccccc--------c------CCC----CC----C---------------ch-------------
Q 047978 115 AESNAGARVLVVCSEITVGTF--------R------APS----DE----N---------------LS------------- 144 (320)
Q Consensus 115 l~~~~~~~~LVv~~e~~s~~~--------~------~~~----~~----~---------------~~------------- 144 (320)
+++|..+++||++.|..+..- . ++. +. . ++
T Consensus 109 I~sG~~d~vLv~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~~~~~ygitre~~a~va~~sh~~A 188 (394)
T PRK06445 109 IATGMADIVIAGGVEHMTRTPMGDNPHIEPNPKLLTDPKYIEYDLTTGYVMGLTAEKLAEEAGIKREEMDRWSLRSHQLA 188 (394)
T ss_pred HHcCCCCEEEEeeecccccCccccCccccCChhhccccccCcccccCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHH
Confidence 789999999999999765210 0 010 00 0 00
Q ss_pred ---------------------------hh---h-------------------------hhhhhccCceEEEEeecCCC-C
Q 047978 145 ---------------------------CL---V-------------------------NRAIVGDGTAALIVGACPDI-N 168 (320)
Q Consensus 145 ---------------------------~~---~-------------------------~~~~~GDgAaA~ll~~~~~~-~ 168 (320)
+. . ..+..+|||+|+||++++.. .
T Consensus 189 ~~a~~~g~~~~ei~p~~~~~~~~~~~~npda~~r~~~t~e~~~~~~~v~~~~g~lt~~~~~~~~DGAaavvl~s~~~A~~ 268 (394)
T PRK06445 189 AKAIQEGYFKDEILPIEVEVEGKKKVVDVDQSVRPDTSLEKLAKLPPAFKPDGVITAGNSSPLNSGASYVLLMSKKAVKK 268 (394)
T ss_pred HHHHHcCCCcceEeEEEecCCCCceeeCCCCCCCCCCCHHHHhcCCCccCCCCcEecCcCCCCCCceEEEEEecHHHHHH
Confidence 00 0 01122455555555543321 0
Q ss_pred C-CCCeeEEeccCceecCCCcccccccccccceechhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHHHHHHcCC
Q 047978 169 T-ERPLFHIVPTAQTILPDSEDAIKGHFRESPLIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGL 247 (320)
Q Consensus 169 ~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~ 247 (320)
. .++..++...+..... .. .........++.+++++|++++|+ +++=+|-......-...+.||+
T Consensus 269 ~~~~~~a~i~g~~~~~~~---------~~---~~~~~~~~a~~~al~~Agl~~~dI--d~~e~~d~f~~~~l~~~e~lg~ 334 (394)
T PRK06445 269 YGLKPMAKIRSFGFAGVP---------PA---IMGKGPVPASKKALEKAGLSVKDI--DLWEINEAFAVVVLYAIKELGL 334 (394)
T ss_pred CCCCceEEEEEEEEeccC---------Cc---hhcchHHHHHHHHHHHcCCCHHHc--CEEEecccchHHHHHHHHHhCC
Confidence 0 0111122221111000 00 111344578899999999999997 3888998887777778899999
Q ss_pred CcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCCCCCCceEEEEeeccchhhhheeeee
Q 047978 248 EKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEAIVLRS 314 (320)
Q Consensus 248 ~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~~l~~ 314 (320)
.++++-.+ --.--+||...|+=...+.+++.+.. .+.+ .+.|....|+|....+++++.
T Consensus 335 ~~~~vN~~-GG~la~Ghp~gatG~~~v~e~~~qL~----~~~~---~~gl~~~~~~gg~g~a~~~e~ 393 (394)
T PRK06445 335 DPETVNIK-GGAIAIGHPLGATGARIVGTLARQLQ----IKGK---DYGVATLCVGGGQGGAVVLER 393 (394)
T ss_pred CccccCCC-CCHHHcCCCccchHHHHHHHHHHHHH----hcCC---CEEEEEEcccCChhhEEEEEc
Confidence 87765432 12334799999998888888887621 2333 667777777777777777763
No 69
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=99.14 E-value=9.6e-10 Score=104.52 Aligned_cols=81 Identities=16% Similarity=0.085 Sum_probs=61.5
Q ss_pred cccchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCC-CCCCCHHHHHHHHcCCCcc--------hhhhhhh--------
Q 047978 52 LVPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSG-VDMPGADYQLTKLLGLKPS--------VKRVMLT-------- 114 (320)
Q Consensus 52 ~~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~-~~~p~~a~~l~~~LGl~~~--------~c~~~l~-------- 114 (320)
.+.++.+|+.+|++++|+++|++|+|||.+|++++.+ +.....+....-.+|++.. .|++.++
T Consensus 27 ~~~~~~eL~~~a~~~aL~~Agi~~~dID~vi~G~~~~~~~~~~~~~~~~l~ag~~~~~p~~~V~~aCaSG~~Av~~A~~~ 106 (397)
T PRK06954 27 ASLTAPQLGAAAIAAAVERAGLKPEQIDEVVMGCVLPAGQGQAPARQAALGAGLPLSVGCTTVNKMCGSGMRAAMFAHDM 106 (397)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccchHHHHHHHHcCCCCCCccEeeccccchHHHHHHHHHHHH
Confidence 3667899999999999999999999999999998876 3322233333344565541 2765433
Q ss_pred hhcCCCCeEEEEEeeccc
Q 047978 115 AESNAGARVLVVCSEITV 132 (320)
Q Consensus 115 l~~~~~~~~LVv~~e~~s 132 (320)
+++|..+.+||+++|..|
T Consensus 107 I~sG~~d~vLv~G~E~ms 124 (397)
T PRK06954 107 LVAGSVDVIVAGGMESMT 124 (397)
T ss_pred HHCCCCCEEEEEeeeccC
Confidence 789999999999999887
No 70
>PRK06065 acetyl-CoA acetyltransferase; Provisional
Probab=99.10 E-value=1.6e-08 Score=95.94 Aligned_cols=222 Identities=17% Similarity=0.102 Sum_probs=135.7
Q ss_pred cccchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCC-C-CCCCHHHHHHHHcCCCcch-------h-hhhhh-------
Q 047978 52 LVPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSG-V-DMPGADYQLTKLLGLKPSV-------K-RVMLT------- 114 (320)
Q Consensus 52 ~~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~-~-~~p~~a~~l~~~LGl~~~~-------c-~~~l~------- 114 (320)
++++..+|+.+|++++|+++|++++|||.+|+++... + ..+..+..+++.||+.+.. | ++...
T Consensus 25 ~~~~~~~L~~~A~~~Al~dagl~~~dID~~i~~~~~~~~~~~~~~a~~l~~~lG~~~~~~~~V~~~gasG~~al~~A~~~ 104 (392)
T PRK06065 25 LLETPQELAWEAASKALDEAGLELKDIDCVVIGSAPDAFDGVHMKGEYLSHGSGGIRKPVSRVYVGGATGVMTAIAGWYH 104 (392)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCcccccccHHHHHHHHcCCCCCCeEEEecCchhHHHHHHHHHHH
Confidence 4678899999999999999999999999999876322 2 2456788899999986421 3 33211
Q ss_pred hhcCCCCeEEEEEeeccccc---------------ccCCCCCC-------------------------------------
Q 047978 115 AESNAGARVLVVCSEITVGT---------------FRAPSDEN------------------------------------- 142 (320)
Q Consensus 115 l~~~~~~~~LVv~~e~~s~~---------------~~~~~~~~------------------------------------- 142 (320)
+++|..++||||++|+.+.. +..|....
T Consensus 105 I~sG~ad~vLVvg~e~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~~~~Al~a~rym~~yG~~~e~lA~vav~~~~~A~~N 184 (392)
T PRK06065 105 VASGLCQKVLAVAEEKMSPARPHPQAVFRYIWDPILEKPLNPNLIWIFAMEMHRYMATYGIKKEEIALVSVKNKRNALNN 184 (392)
T ss_pred HhCCCCCEEEEEEeecccccccchhHHHhhhccchhccCCCccHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHhhccC
Confidence 78999999999999984210 00010000
Q ss_pred ----------chh------------hhhhhhhccCceEEEEeecCCC-CC-CCCeeEEeccCceecCCCccccccccccc
Q 047978 143 ----------LSC------------LVNRAIVGDGTAALIVGACPDI-NT-ERPLFHIVPTAQTILPDSEDAIKGHFRES 198 (320)
Q Consensus 143 ----------~~~------------~~~~~~~GDgAaA~ll~~~~~~-~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 198 (320)
.++ +..++..+|||+|+||.+++.. .. ..+ ..+...+...-+.... .+..
T Consensus 185 P~A~~r~~lt~e~vl~s~~ia~Pl~l~d~~~~~DGAaA~vl~s~e~A~~l~~~~-v~I~g~~~~~~~~~~~-----~~~~ 258 (392)
T PRK06065 185 PYAQLGSKITVEDVLKSEVLVWPVQLLDVSPVSDGAAAIVLASEDLARRYTDTP-VWVEGVGWTLDNTEWP-----NRDL 258 (392)
T ss_pred chhhhcCCCCHHHHhcCCcccCCCchhhcCCCCCceEEEEEeCHHHHHhcCCCC-EEEEEEEEecCccccc-----cccc
Confidence 000 1234456899999999876432 11 122 2233322211111100 0000
Q ss_pred ceechhHHHHHHHHhhhcCCCC--CCCCceEEEEcCCChhHHHHHHHHcCCCcc----------------hhhhhH-HHH
Q 047978 199 PLIADNIDKFLAESFDQVSLND--HDWNSLFWMMHPIGPAVLDQIEGKLGLEKT----------------KLRETR-HVL 259 (320)
Q Consensus 199 g~~~~~~~~~i~~~l~~~g~~~--~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e----------------~~~~~~-~~~ 259 (320)
..........+.+++++|+++ +|+| .+=+|-....+.-...+.||+-+. +++.|. -=.
T Consensus 259 -~~~~~~~~a~~~a~~~aGi~~p~~diD--~~ei~D~Fs~~~l~~~E~lG~~~~G~~~~~~~~g~~~~~G~~pvN~~GG~ 335 (392)
T PRK06065 259 -AYPRYVEFAARMAYKMAGIERPRKEID--VAEPYDPFDYKELHHLEGLQLAKRGEAPKLLKEGVFDIDGDIPSSPSGGL 335 (392)
T ss_pred -cccHHHHHHHHHHHHHcCCCCchhhCc--EEEecCCChHHHHHHHHHcCCCCCCcHHHHHHCCCccCCCCeeecCCCcc
Confidence 112333468889999999985 7873 677888776665666688885542 111100 001
Q ss_pred hccCCcccchHHHHHHHHHHhch
Q 047978 260 SEYGNMASATVLFVLDEMRKRSV 282 (320)
Q Consensus 260 ~~~Gn~~sasi~~~L~~~~~~~~ 282 (320)
-.+||.+.|+=+..+.++.++..
T Consensus 336 la~Ghp~gatG~~~~~e~~~QLr 358 (392)
T PRK06065 336 LGVGNPIAAAGLMKVISIYWQLK 358 (392)
T ss_pred ccCCCCccHHHHHHHHHHHHHHh
Confidence 12799998888888888887754
No 71
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.08 E-value=2.5e-09 Score=102.61 Aligned_cols=245 Identities=12% Similarity=0.084 Sum_probs=144.8
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCcC------------------EEEEEee---------------CC-C-------CCCCH
Q 047978 56 VPKLGKEAVSKAIKEWGQPISKIT------------------HLISCSV---------------SG-V-------DMPGA 94 (320)
Q Consensus 56 ~~~la~~Aa~~aL~~ag~~~~dId------------------~li~~s~---------------t~-~-------~~p~~ 94 (320)
...|+..|+++||+++|+++.+++ .++.++. .+ + ..|+.
T Consensus 75 ~~~~~~~aa~~Al~dAgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (425)
T PRK06501 75 SEALARLAAEEALAQAGIGKGDFPGPLFLAAPPVELEWPARFALAAAVGDNDAPSYDRLLRAARGGRFDALHERFQFGSI 154 (425)
T ss_pred HHHHHHHHHHHHHHHcCCCccccccceeeccccccCCCCceEEEEEecCCccHHHHHHHHhhcCcccCChhhhhhcccHH
Confidence 356889999999999999654432 1111111 11 1 34568
Q ss_pred HHHHHHHcCCCcc------hhhhhhh--------hhcCCCCeEEEEEeec---------------ccccccC-------C
Q 047978 95 DYQLTKLLGLKPS------VKRVMLT--------AESNAGARVLVVCSEI---------------TVGTFRA-------P 138 (320)
Q Consensus 95 a~~l~~~LGl~~~------~c~~~l~--------l~~~~~~~~LVv~~e~---------------~s~~~~~-------~ 138 (320)
+.+|+..+|++.. .|+++++ |+++..+.+||+++|. .+. ..+ |
T Consensus 155 a~~i~~~~gl~G~~~~i~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~d~~~~~~~~~~~~~~~~ls~-~~~~~~~~~rp 233 (425)
T PRK06501 155 ADRLADRFGTRGLPISLSTACASGATAIQLGVEAIRRGETDRALCIATDGSVSAEALIRFSLLSALST-QNDPPEKASKP 233 (425)
T ss_pred HHHHHHHhCCCCCceeecCccHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHhhcccc-CCCCCCcccCC
Confidence 8999999999753 3766544 7899999999999993 221 111 1
Q ss_pred CCCCchhhhhhhhhccCceEEEEeecCCCC-C-CCCeeEEeccCceecCCCcccccccccccceechhHHHHHHHHhhhc
Q 047978 139 SDENLSCLVNRAIVGDGTAALIVGACPDIN-T-ERPLFHIVPTAQTILPDSEDAIKGHFRESPLIADNIDKFLAESFDQV 216 (320)
Q Consensus 139 ~~~~~~~~~~~~~~GDgAaA~ll~~~~~~~-~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~i~~~l~~~ 216 (320)
-|. + ...+++||||+|+||++.+... . ...+-.+...+........ .....+ ...+.++++++|+++
T Consensus 234 fd~---~-r~G~v~GEGaaalVLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~----~~~~~~---~~~~~~ai~~AL~~a 302 (425)
T PRK06501 234 FSK---D-RDGFVMAEGAGALVLESLESAVARGAKILGIVAGCGEKADSFHR----TRSSPD---GSPAIGAIRAALADA 302 (425)
T ss_pred CCC---C-CCCeeeeccEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCC----CCCCCC---HHHHHHHHHHHHHHc
Confidence 111 1 2468999999999999865421 0 1111122221111000000 001111 245778999999999
Q ss_pred CCCCCCCCceEEEEcCCChhHHHHH-----HHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCC--
Q 047978 217 SLNDHDWNSLFWMMHPIGPAVLDQI-----EGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATT-- 289 (320)
Q Consensus 217 g~~~~d~~~~~~i~h~~~~~~~~~~-----~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~-- 289 (320)
|++++|+ .++.+|-.+....+.. .+.++-...+++.+ ..-..+||+.+|+=.+.+...+.. +++|.+.|
T Consensus 303 gi~p~dI--d~i~~Hgtgt~~~d~~E~~al~~~~~~~~~~~pv~-s~k~~~Gh~~~AsG~~~~~~~~l~-l~~~~ipp~~ 378 (425)
T PRK06501 303 GLTPEQI--DYINAHGTSTPENDKMEYLGLSAVFGERLASIPVS-SNKSMIGHTLTAAGAVEAVFSLLT-IQTGRLPPTI 378 (425)
T ss_pred CCCHHHc--CEEEecCccCcchHHHHHHHHHHHhcccCCCcEEE-CCCcccCCCchhhhHHHHHHHHHH-HhcCcCCCcC
Confidence 9999986 3899998876655443 33444221222221 124467999988877666543221 11144321
Q ss_pred ---------------C----CCCceEEEEeeccchhhhheeeeecc
Q 047978 290 ---------------G----EELEWGVLLGFEAGLTVEAIVLRSIP 316 (320)
Q Consensus 290 ---------------G----~~~d~vll~~~G~G~~~~a~~l~~~~ 316 (320)
. ...++++.-+||-|.+-.+++++..|
T Consensus 379 n~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~gfgG~n~~~vl~~~~ 424 (425)
T PRK06501 379 NYDNPDPAIPLDVVPNVARDARVTAVLSNSFGFGGQNASLVLTAEP 424 (425)
T ss_pred CCCCCCCCCCcccCCCcccCCCCCEEEEeCccCCCeeEEEEEecCC
Confidence 0 01156777899999999999998765
No 72
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=99.08 E-value=5.5e-09 Score=99.09 Aligned_cols=81 Identities=17% Similarity=0.063 Sum_probs=66.0
Q ss_pred ccchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCC-CC-CCCHHHHHHHHcCCCc-c-------hhhhhhh--------
Q 047978 53 VPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSG-VD-MPGADYQLTKLLGLKP-S-------VKRVMLT-------- 114 (320)
Q Consensus 53 ~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~-~~-~p~~a~~l~~~LGl~~-~-------~c~~~l~-------- 114 (320)
+.+..+|+.+|++++|+++|+.++|||.+|++++.+ .. .+..+.+++..+|++. . .|++.+.
T Consensus 24 ~~~~~eLa~~A~~~AL~~ag~~~~dID~vi~g~~~~~~~~g~~~a~~~~~~lGl~~~~p~~~V~~aCaSG~~Al~~A~~~ 103 (391)
T PRK07661 24 TVRPDDLGALVVKETLKRAGNYEGPIDDLIIGCAMPEAEQGLNMARNIGALAGLPYTVPAITINRYCSSGLQSIAYGAER 103 (391)
T ss_pred CCCHHHHHHHHHHHHHHhcCCChhHCCEEEEEeccccccccchHHHHHHHHcCCCCCcceeehhhhhhHHHHHHHHHHHH
Confidence 557899999999999999988889999999998776 22 3667778999999984 2 2665433
Q ss_pred hhcCCCCeEEEEEeecccc
Q 047978 115 AESNAGARVLVVCSEITVG 133 (320)
Q Consensus 115 l~~~~~~~~LVv~~e~~s~ 133 (320)
+++|..+.+||++.|..+.
T Consensus 104 I~sG~~d~vLv~G~E~ms~ 122 (391)
T PRK07661 104 IMLGHSEAVIAGGAESMSL 122 (391)
T ss_pred HHcCCCCEEEEEEEeeccc
Confidence 7899999999999998763
No 73
>PLN02287 3-ketoacyl-CoA thiolase
Probab=99.04 E-value=9.5e-09 Score=98.92 Aligned_cols=245 Identities=12% Similarity=0.024 Sum_probs=145.1
Q ss_pred cccchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCC-CCCCC-HHHHHHHHcCCCc-c-------hhhhhhh-------
Q 047978 52 LVPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSG-VDMPG-ADYQLTKLLGLKP-S-------VKRVMLT------- 114 (320)
Q Consensus 52 ~~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~-~~~p~-~a~~l~~~LGl~~-~-------~c~~~l~------- 114 (320)
.+.+..+|+.+|++++|+++|++++|||.+|+++.++ +..+. .+..+...+|+++ . .|++.+.
T Consensus 67 ~~~s~~eLa~eA~~~AL~dAgl~~~dID~vv~G~~~~~~~~~~~~~r~~a~~~Gl~~~~pa~~V~~~CaSG~~Ai~~Aa~ 146 (452)
T PLN02287 67 KDTYPDDLLAPVLKAVVEKTGLNPSEVGDIVVGTVLAPGSQRANECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAA 146 (452)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCcccccchHHHHHHHHCCCCCCcceEEEeccCchHHHHHHHHHH
Confidence 3678999999999999999999999999999988876 54444 3456667889975 2 2655332
Q ss_pred -hhcCCCCeEEEEEeeccccc-------ccC-----C--CC--CC-----------------------------------
Q 047978 115 -AESNAGARVLVVCSEITVGT-------FRA-----P--SD--EN----------------------------------- 142 (320)
Q Consensus 115 -l~~~~~~~~LVv~~e~~s~~-------~~~-----~--~~--~~----------------------------------- 142 (320)
+++|..+.+||++.|..+.. +.+ + .+ ..
T Consensus 147 ~I~sG~~dvvLv~GvE~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~y~~~yGitrE~la~vAvksh~nAa~np~ 226 (452)
T PLN02287 147 AIKAGFYDIGIGAGVESMTTNPMAWEGGVNPRVESFSQAQDCLLPMGITSENVAERFGVTREEQDQAAVESHRKAAAATA 226 (452)
T ss_pred HHHcCCCCeEEEEeEEecCCCchhhccccCchhhccccccccCcCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhhhh
Confidence 78999999999999977531 000 0 00 00
Q ss_pred ---chh-h--------------------------------------------------hhhhhhccCceEEEEeecCCC-
Q 047978 143 ---LSC-L--------------------------------------------------VNRAIVGDGTAALIVGACPDI- 167 (320)
Q Consensus 143 ---~~~-~--------------------------------------------------~~~~~~GDgAaA~ll~~~~~~- 167 (320)
.+. . ...+.++|||+|+||.+++..
T Consensus 227 ag~f~~ei~pv~~~~~~~~~~~~~~~~~~~De~~r~~~~~e~l~~l~~v~~~~g~lt~~~~s~~sDGAaalvl~see~A~ 306 (452)
T PLN02287 227 SGKFKDEIVPVHTKIVDPKTGEEKPIVISVDDGIRPNTTLADLAKLKPVFKKNGTTTAGNSSQVSDGAGAVLLMKRSVAM 306 (452)
T ss_pred cCCcccceeeeeccccccccCCccceeecccCCCCCCCCHHHHhcCCCccCCCCCEeccccCCcCCceEEEEEeeHHHHH
Confidence 000 0 022334566666666654321
Q ss_pred CCC-CCeeEEeccCceecCCCcccccccccccceechhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHHHHHHcC
Q 047978 168 NTE-RPLFHIVPTAQTILPDSEDAIKGHFRESPLIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLG 246 (320)
Q Consensus 168 ~~~-~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg 246 (320)
... .+...+...+.. . .... ........+++.+++++|++++|+| ++=+|-......-...+.||
T Consensus 307 ~~~~~~~a~~~~~~~~--~---------~~~~-~~~~~~~~A~~~al~~Agl~~~DID--~~Ei~daFa~~~l~~~e~lG 372 (452)
T PLN02287 307 QKGLPILGVFRSFAAV--G---------VDPA-VMGIGPAVAIPAAVKAAGLELDDID--LFEINEAFASQFVYCCKKLG 372 (452)
T ss_pred HCCCCeEEEEEEEeec--c---------CCCc-cchHHHHHHHHHHHHHcCCCHHHCC--EEEecchHHHHHHHHHHHcC
Confidence 000 011111111000 0 0000 1112345788999999999999973 77777655444445578999
Q ss_pred CCcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCCCCCCceEEEEeeccchhhhheeeeecc
Q 047978 247 LEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEAIVLRSIP 316 (320)
Q Consensus 247 ~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~~l~~~~ 316 (320)
+.++++-.+ --.--+||...|+=...+.+++.+... .|.+..+.|.....+|..-.+++++..-
T Consensus 373 ~~~~pvN~s-GG~la~GHp~gAsG~~~v~~l~~qL~~-----~~~~~~~gl~~~c~ggG~g~a~~ie~~~ 436 (452)
T PLN02287 373 LDPEKVNVN-GGAIALGHPLGATGARCVATLLHEMKR-----RGKDCRFGVVSMCIGTGMGAAAVFERGD 436 (452)
T ss_pred CCccccCCC-CcHHhccCcHHHHHHHHHHHHHHHHHh-----cCCCCCeeEEEEccccCceeEEEEEecC
Confidence 987665332 123347999888888888888776321 2200024444444444444557777653
No 74
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=99.02 E-value=3.5e-09 Score=101.42 Aligned_cols=210 Identities=14% Similarity=0.124 Sum_probs=128.2
Q ss_pred chHHHHHHHHHHHHHHcCCCCCCcCE----EEEEeeCC-C-------------------CCCCHHHHHHHHcCCCcc---
Q 047978 55 KVPKLGKEAVSKAIKEWGQPISKITH----LISCSVSG-V-------------------DMPGADYQLTKLLGLKPS--- 107 (320)
Q Consensus 55 ~~~~la~~Aa~~aL~~ag~~~~dId~----li~~s~t~-~-------------------~~p~~a~~l~~~LGl~~~--- 107 (320)
....|+..|+++||+++|++++++|. +++++.++ + ..+..+..++..+|++..
T Consensus 86 ~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~gl~g~~~~ 165 (421)
T cd00833 86 PQQRLLLEVAWEALEDAGYSPESLAGSRTGVFVGASSSDYLELLARDPDEIDAYAATGTSRAFLANRISYFFDLRGPSLT 165 (421)
T ss_pred HHHHHHHHHHHHHHHHcCCCchhcCCCCceEEeCcCHHHHHHHHhhcccccCcccccCcchHHHHHHHHHHcCCCCCcee
Confidence 34789999999999999999888774 66666533 1 113467889999998643
Q ss_pred ---hhhhhhh--------hhcCCCCeEEEEEeeccccc----------------ccCCCCCCchhhhhhhhhccCceEEE
Q 047978 108 ---VKRVMLT--------AESNAGARVLVVCSEITVGT----------------FRAPSDENLSCLVNRAIVGDGTAALI 160 (320)
Q Consensus 108 ---~c~~~l~--------l~~~~~~~~LVv~~e~~s~~----------------~~~~~~~~~~~~~~~~~~GDgAaA~l 160 (320)
.|++.+. +++|..+.+||+++|..... ...|-+. ...+.++||||+|+|
T Consensus 166 v~~acas~~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~----~~~g~~~geGAaalv 241 (421)
T cd00833 166 VDTACSSSLVALHLACQSLRSGECDLALVGGVNLILSPDMFVGFSKAGMLSPDGRCRPFDA----DADGYVRGEGVGVVV 241 (421)
T ss_pred eccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeccCCHHHHHHHhhCCCCCCCCCCCCCCC----CCCCeeeeceEEEEE
Confidence 3665433 78899999999999975310 0112221 224788999999999
Q ss_pred EeecCCC-C-CCCCeeEEeccCceecCCCcccccccccccceechhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHH
Q 047978 161 VGACPDI-N-TERPLFHIVPTAQTILPDSEDAIKGHFRESPLIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVL 238 (320)
Q Consensus 161 l~~~~~~-~-~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~ 238 (320)
|++.+.. . .......+...+......... .... ......++++.+|+++|++++|+ +++.+|-.+....
T Consensus 242 L~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~----~~~p---~~~~~~~a~~~al~~Agi~~~di--d~i~~hgtgt~~~ 312 (421)
T cd00833 242 LKRLSDALRDGDRIYAVIRGSAVNQDGRTKG----ITAP---SGEAQAALIRRAYARAGVDPSDI--DYVEAHGTGTPLG 312 (421)
T ss_pred EeeHHHHHHCCCeEEEEEEEEEEcCCCCCCC----CcCC---CHHHHHHHHHHHHHHhCCCHHHC--cEEEeeCCCCCCC
Confidence 9986542 1 011122332221110000000 0111 13566789999999999999986 3889998765433
Q ss_pred HH-----HHHHcCCC---cchhhhhHHHHhccCCcccchHHHHHHHHH
Q 047978 239 DQ-----IEGKLGLE---KTKLRETRHVLSEYGNMASATVLFVLDEMR 278 (320)
Q Consensus 239 ~~-----~~~~lg~~---~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~ 278 (320)
+. +.+.++-. ...+..+ ..-..+||+.+|+-++.|...+
T Consensus 313 D~~E~~al~~~f~~~~~~~~~~~v~-s~k~~~Gh~~~aag~~~l~~~~ 359 (421)
T cd00833 313 DPIEVEALAKVFGGSRSADQPLLIG-SVKSNIGHLEAAAGLAGLIKVV 359 (421)
T ss_pred CHHHHHHHHHHHhccCCCCCceeee-cCcCccccchhhhHHHHHHHHH
Confidence 22 33333321 0122111 1244589999998877776543
No 75
>PRK08256 lipid-transfer protein; Provisional
Probab=99.01 E-value=2.2e-08 Score=95.22 Aligned_cols=242 Identities=17% Similarity=0.032 Sum_probs=147.9
Q ss_pred ccchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcc-------hhhhhhh--------hhc
Q 047978 53 VPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPS-------VKRVMLT--------AES 117 (320)
Q Consensus 53 ~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~-------~c~~~l~--------l~~ 117 (320)
+.+..+|+.+|+++||+++|++++|||.+++++..+.... ...++..+|++.. .|++.+. +++
T Consensus 19 ~~~~~~La~~A~~~Al~dAGl~~~dID~~~~g~~~~~~~~--~~~~~~~lGl~~~~~~~v~~~caSg~~ai~~A~~~I~s 96 (391)
T PRK08256 19 SWDYPDMAAEAGRAALADAGIDYDAVQQAYVGYVYGDSTS--GQRALYEVGMTGIPIVNVNNNCSTGSTALFLARQAVRS 96 (391)
T ss_pred CCCHHHHHHHHHHHHHHHcCCChHHCCeeEEEEEeCCcch--hHHHHHHcCCCCCCCcccccccHHHHHHHHHHHHHHHC
Confidence 4678899999999999999999999999988876652221 2346778898652 2654432 789
Q ss_pred CCCCeEEEEEeeccccc-c----------c-----------CCC-CC---C-----------------------------
Q 047978 118 NAGARVLVVCSEITVGT-F----------R-----------APS-DE---N----------------------------- 142 (320)
Q Consensus 118 ~~~~~~LVv~~e~~s~~-~----------~-----------~~~-~~---~----------------------------- 142 (320)
|..+.+||++.|..+.. + . .+. .. .
T Consensus 97 G~~d~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~y~~~~G~t~e~~a~vav~~~~ 176 (391)
T PRK08256 97 GAADCALALGFEQMQPGALGSVWDDRPSPLERFDKALAELQGFDPAPPALRMFGGAGREHMEKYGTTAETFAKIGVKARR 176 (391)
T ss_pred CCCCEEEEEEEeeccccccccccccccchhhhhhhhhhhhcccccCCccHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 99999999999976521 0 0 000 00 0
Q ss_pred ---------------chh------------hhhhhhhccCceEEEEeecCCC-CCC-CCeeEEeccCceecCCCcccccc
Q 047978 143 ---------------LSC------------LVNRAIVGDGTAALIVGACPDI-NTE-RPLFHIVPTAQTILPDSEDAIKG 193 (320)
Q Consensus 143 ---------------~~~------------~~~~~~~GDgAaA~ll~~~~~~-~~~-~~~~~~~~~~~~~~p~~~~~~~~ 193 (320)
.++ +..++..+|||+|+||.+++.. ... .+..++.+.+....+... +
T Consensus 177 ~A~~np~A~~~~~~t~e~~~~s~~i~~Pl~~~d~~~~~DGAaA~il~s~~~a~~~~~~~~v~i~g~~~~~~~~~~--~-- 252 (391)
T PRK08256 177 HAANNPYAQFRDEYTLEDVLASPMIWGPLTRLQCCPPTCGAAAAIVCSEEFARKHGLDRAVEIVAQAMTTDTPST--F-- 252 (391)
T ss_pred hhhcCChhhcCCCCCHHHHhcCCcccCCCcHhhcCCCCCCeEEEEEecHHHHHhcCCCCCEEEEEEEEecccccc--c--
Confidence 000 1123345799999988876532 111 233444432221111000 0
Q ss_pred cccccc-e-echhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHHHHHHcCCCcc------------------hhh
Q 047978 194 HFRESP-L-IADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKT------------------KLR 253 (320)
Q Consensus 194 ~~~~~g-~-~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e------------------~~~ 253 (320)
..+... + ........++.+++++|++++|+ +.+-+|.......-...+.||+.++ .+-
T Consensus 253 ~~~~~~~~~~~~~~~~a~~~a~~~ag~~~~Di--D~~ei~d~f~~~~l~~le~lg~~~~Ge~~~~~~~G~~~~~G~~pvN 330 (391)
T PRK08256 253 DGRSMIDLVGYDMTRAAAQQVYEQAGIGPEDI--DVVELHDCFSANELLTYEALGLCPEGEAEKFIDDGDNTYGGRWVVN 330 (391)
T ss_pred cccccccccccHHHHHHHHHHHHHcCCCHHHC--CEEeeccCCcHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeeC
Confidence 000000 1 12234468899999999999997 3889999988888888999999876 221
Q ss_pred hhHHHHhccCCcccchHHHHHHHHHHhchhc-CC--CCCCCCCceEEEEeeccchh
Q 047978 254 ETRHVLSEYGNMASATVLFVLDEMRKRSVEE-GK--ATTGEELEWGVLLGFEAGLT 306 (320)
Q Consensus 254 ~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~-g~--l~~G~~~d~vll~~~G~G~~ 306 (320)
.+ -=.-.+||...|+=+..+.+++.+..++ |. ++.. +..+..+.|.|.+
T Consensus 331 ~~-GG~ls~Ghp~gasG~~~~~e~~~QL~g~ag~~Qv~~~---~~~l~~~~G~~~~ 382 (391)
T PRK08256 331 PS-GGLLSKGHPLGATGLAQCAELTWQLRGTAGARQVEGA---RLALQHNLGLGGA 382 (391)
T ss_pred CC-CccccCCCCccHHHHHHHHHHHHHhcCCcCCCcCCcc---ceEEEecccccee
Confidence 11 0012269998888888888887764422 11 2222 5667777775544
No 76
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=99.01 E-value=1e-08 Score=97.82 Aligned_cols=80 Identities=14% Similarity=0.034 Sum_probs=63.3
Q ss_pred ccchHHHHHHHHHHHHHHc-CCCCCCcCEEEEEeeCC--CCCCCHHHHHHHHcCCCcc-------hhhhhhh--------
Q 047978 53 VPKVPKLGKEAVSKAIKEW-GQPISKITHLISCSVSG--VDMPGADYQLTKLLGLKPS-------VKRVMLT-------- 114 (320)
Q Consensus 53 ~e~~~~la~~Aa~~aL~~a-g~~~~dId~li~~s~t~--~~~p~~a~~l~~~LGl~~~-------~c~~~l~-------- 114 (320)
+.+..+|+.+|+++||+++ |++++|||.+|+++..+ ...+..+..++..+|+++. .|++...
T Consensus 24 ~~~~~eL~~~A~~~AL~da~gl~~~dID~vv~g~~~~~~~~g~~~~~~~a~~lGl~~~p~~~v~~~caSG~~av~~Aa~~ 103 (406)
T PRK07851 24 DMRPDDLAAQMVRAALDKVPALDPTDIDDLMLGCGLPGGEQGFNMARVVAVLLGYDFLPGTTVNRYCSSSLQTTRMAFHA 103 (406)
T ss_pred CCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEcccccccccCCHHHHHHHHcCCCCCCeeeeeccchhHHHHHHHHHHH
Confidence 5778999999999999997 99999999999876544 2235567789999999642 2554321
Q ss_pred hhcCCCCeEEEEEeeccc
Q 047978 115 AESNAGARVLVVCSEITV 132 (320)
Q Consensus 115 l~~~~~~~~LVv~~e~~s 132 (320)
+++|..+.+||++.|+.+
T Consensus 104 I~sG~~d~vLv~G~e~~s 121 (406)
T PRK07851 104 IKAGEGDVFISAGVETVS 121 (406)
T ss_pred HHCCCCCEEEEeeEEecc
Confidence 789999999999999754
No 77
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.99 E-value=1.1e-08 Score=97.91 Aligned_cols=248 Identities=13% Similarity=0.120 Sum_probs=145.4
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCcC----EEEEEeeCC----------------------C----CCC-CHHHHHHHHcCC
Q 047978 56 VPKLGKEAVSKAIKEWGQPISKIT----HLISCSVSG----------------------V----DMP-GADYQLTKLLGL 104 (320)
Q Consensus 56 ~~~la~~Aa~~aL~~ag~~~~dId----~li~~s~t~----------------------~----~~p-~~a~~l~~~LGl 104 (320)
...|+..|+++||+++|++++++| .+++++... + ..+ ..+.++...||+
T Consensus 72 ~~~l~~~aa~~Al~dAGl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 151 (411)
T PRK07314 72 FIQYGIAAAKQAVEDAGLEITEENADRIGVIIGSGIGGLETIEEQHITLLEKGPRRVSPFFVPMAIINMAAGHVSIRYGA 151 (411)
T ss_pred HHHHHHHHHHHHHHHcCCCcccCCcccEEEEEecCcCChHHHHHHHHHHHhcCccccChhhhhhhcchHHHHHHHHHhCC
Confidence 467899999999999999999988 466665421 1 111 245788999998
Q ss_pred Ccc------hhhhhhh--------hhcCCCCeEEEEEeecccccc---------------cCCCCC--Cchhhhhhhhhc
Q 047978 105 KPS------VKRVMLT--------AESNAGARVLVVCSEITVGTF---------------RAPSDE--NLSCLVNRAIVG 153 (320)
Q Consensus 105 ~~~------~c~~~l~--------l~~~~~~~~LVv~~e~~s~~~---------------~~~~~~--~~~~~~~~~~~G 153 (320)
+.. .|++.+. |++|..+.+||.+.|.....+ .+|... ..+....++++|
T Consensus 152 ~Gp~~tv~~acaSgl~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd~~~dG~~~g 231 (411)
T PRK07314 152 KGPNHSIVTACATGAHAIGDAARLIAYGDADVMVAGGAEAAITPLGIAGFAAARALSTRNDDPERASRPFDKDRDGFVMG 231 (411)
T ss_pred CCccccchhhhHHHHHHHHHHHHHHhcCCCCEEEEeeecccCCHHHHHHHHHhccccCCCCCCCcCcCCCcCCCCCEeEE
Confidence 643 2654322 789999999999998642110 011100 000112468899
Q ss_pred cCceEEEEeecCCCC-C-CCCeeEEeccCceecCCCcccccccccccceechhHHHHHHHHhhhcCCCCCCCCceEEEEc
Q 047978 154 DGTAALIVGACPDIN-T-ERPLFHIVPTAQTILPDSEDAIKGHFRESPLIADNIDKFLAESFDQVSLNDHDWNSLFWMMH 231 (320)
Q Consensus 154 DgAaA~ll~~~~~~~-~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h 231 (320)
|||+|+||++.+... . ..+...+...+....... .. ..... ......+++.+++++|++++||+ ++-.|
T Consensus 232 eGAaavvL~~~~~A~~~g~~~~a~I~g~~~~~d~~~--~~--~~~~~---~~~~~~a~~~Al~~agi~~~dId--~v~~h 302 (411)
T PRK07314 232 EGAGILVLEELEHAKARGAKIYAEVVGYGMTGDAYH--MT--APAPD---GEGAARAMKLALKDAGINPEDID--YINAH 302 (411)
T ss_pred ceEEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCC--CC--CCCCC---cHHHHHHHHHHHHHcCCCHHHCC--EEEcc
Confidence 999999999865421 0 111233333221110000 00 01111 23345788999999999999973 88888
Q ss_pred CCChhHHHH-----HHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCC-----------------
Q 047978 232 PIGPAVLDQ-----IEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATT----------------- 289 (320)
Q Consensus 232 ~~~~~~~~~-----~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~----------------- 289 (320)
-.+....+. +.+.++....++..+ ..-..+||+.+|+=.+.|...+.. ++++.+.|
T Consensus 303 gtgt~~~d~~E~~al~~~~~~~~~~~~v~-s~k~~~Gh~~~AsG~~~~i~~~l~-l~~~~ipp~~~~~~~~~~~~~~~~~ 380 (411)
T PRK07314 303 GTSTPAGDKAETQAIKRVFGEHAYKVAVS-STKSMTGHLLGAAGAVEAIFSVLA-IRDQVIPPTINLDNPDEECDLDYVP 380 (411)
T ss_pred ccCCccccHHHHHHHHHHhcccCCCCeeE-CccchhchhHHHHHHHHHHHHHHH-HhCCCcCCCCCCCCCCCCCCccccC
Confidence 876544433 345555333343321 123457998877766555543322 11143321
Q ss_pred C----CCCceEEEEeeccchhhhheeeee
Q 047978 290 G----EELEWGVLLGFEAGLTVEAIVLRS 314 (320)
Q Consensus 290 G----~~~d~vll~~~G~G~~~~a~~l~~ 314 (320)
+ .+.++++.-+||-|.+-.+++++.
T Consensus 381 ~~~~~~~~~~al~~s~gfGG~n~~~vl~~ 409 (411)
T PRK07314 381 NEARERKIDYALSNSFGFGGTNASLVFKR 409 (411)
T ss_pred CcccCCCCCEEEEecccCCCceEEEEEec
Confidence 0 012567888999998888888875
No 78
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=98.98 E-value=2.2e-08 Score=95.04 Aligned_cols=220 Identities=16% Similarity=0.066 Sum_probs=137.1
Q ss_pred cccchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCC-CC--CCCHHHHHHHHcCCCcc-------hhhhhhh-------
Q 047978 52 LVPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSG-VD--MPGADYQLTKLLGLKPS-------VKRVMLT------- 114 (320)
Q Consensus 52 ~~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~-~~--~p~~a~~l~~~LGl~~~-------~c~~~l~------- 114 (320)
.+++..+|+.+|++++|+++|++++|||.||++++.+ +. .+..+..+...+|++.. .|++++.
T Consensus 18 ~~~~~~eL~~eA~~~AL~dAgl~~~dId~vi~g~~~~~~~~~~~~~~~~~~~~~gl~~~p~~~v~~~CaSg~~Al~~A~~ 97 (389)
T PRK07516 18 DAETLESLIVRVAREALAHAGIAAGDVDGIFLGHFNAGFSPQDFPASLVLQADPALRFKPATRVENACATGSAAVYAALD 97 (389)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCccccccchhHHHHHhcCCCCCceeeeccccHHHHHHHHHHHH
Confidence 3678899999999999999999999999999987743 21 11122233445555432 3665433
Q ss_pred -hhcCCCCeEEEEEeeccccc---c-c---------CC-----CCC----------------------------------
Q 047978 115 -AESNAGARVLVVCSEITVGT---F-R---------AP-----SDE---------------------------------- 141 (320)
Q Consensus 115 -l~~~~~~~~LVv~~e~~s~~---~-~---------~~-----~~~---------------------------------- 141 (320)
+++|..+++||+++|+.+.. . . .+ ...
T Consensus 98 ~I~sG~~d~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~y~~~yg~~~e~~a~vav~~~~~A~ 177 (389)
T PRK07516 98 AIEAGRARIVLVVGAEKMTATPTAEVGDILLGASYLKEEGDTPGGFAGVFGRIAQAYFQRYGDQSDALAMIAAKNHANGV 177 (389)
T ss_pred HHHCCCCCEEEEEEehhhccCcchhhHHHhhhccccccccccCCCcHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhh
Confidence 78899999999999986421 0 0 00 000
Q ss_pred -----------Cchh----------------hhhhhhhccCceEEEEeecCCC-CCCCCeeEEeccCceecCCCcccccc
Q 047978 142 -----------NLSC----------------LVNRAIVGDGTAALIVGACPDI-NTERPLFHIVPTAQTILPDSEDAIKG 193 (320)
Q Consensus 142 -----------~~~~----------------~~~~~~~GDgAaA~ll~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~ 193 (320)
+.++ ....+.++|||+|+||.+++.. .... ...+...+....... +
T Consensus 178 ~nP~A~~~~~~t~~~~~~~~~~~~~i~~pl~~~d~~~~~DGAaa~il~s~~~a~~~~~-~v~i~g~~~~~~~~~-----~ 251 (389)
T PRK07516 178 ANPYAQMRKDLGFEFCRTVSEKNPLVAGPLRRTDCSLVSDGAAALVLADAETARALQR-AVRFRARAHVNDFLP-----L 251 (389)
T ss_pred cCChhhcCCcccHHhhhhhhhcCCcccCCCchhhcCCcCcceEEEEEecHHHHHhcCC-CEEEEEEEeccCccc-----c
Confidence 0110 0122356899999999876532 1111 123333222111000 0
Q ss_pred cccccceechhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHHHHHHcCCCcc----------------hhhhhHH
Q 047978 194 HFRESPLIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKT----------------KLRETRH 257 (320)
Q Consensus 194 ~~~~~g~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e----------------~~~~~~~ 257 (320)
. ..+.........+++.+++++|++++|+ +.+-+|-......-...+.||+.++ +++.|
T Consensus 252 ~-~~~~~~~~~~~~a~~~a~~~agl~~~di--d~~e~~d~f~~~~~~~~e~lg~~~~G~~~~~~~~g~~~~~g~~pvN-- 326 (389)
T PRK07516 252 S-RRDPLAFEGPRRAWQRALAQAGVTLDDL--SFVETHDCFTIAELIEYEAMGLAPPGQGARAIREGWTAKDGKLPVN-- 326 (389)
T ss_pred c-CCCccccHHHHHHHHHHHHHcCCCHHHC--CEEEEecCCCHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeec--
Confidence 0 0000112445578899999999999997 3888898887777778899998764 22222
Q ss_pred H---HhccCCcccchHHHHHHHHHHhch
Q 047978 258 V---LSEYGNMASATVLFVLDEMRKRSV 282 (320)
Q Consensus 258 ~---~~~~Gn~~sasi~~~L~~~~~~~~ 282 (320)
. ..-+||...|+=...+.++..+..
T Consensus 327 ~sGG~la~Ghp~gasG~~~~~e~~~QL~ 354 (389)
T PRK07516 327 PSGGLKAKGHPIGATGVSMHVLAAMQLT 354 (389)
T ss_pred CCCCcccCCCCccHHHHHHHHHHHHHhc
Confidence 1 334799999988888888877654
No 79
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=98.95 E-value=4.9e-08 Score=92.80 Aligned_cols=199 Identities=11% Similarity=0.041 Sum_probs=121.2
Q ss_pred CHHHHHHHHcCCCcc------hhhhhhh--------hhcCCCCeEEEEEeeccccc--------------ccCCCCCCch
Q 047978 93 GADYQLTKLLGLKPS------VKRVMLT--------AESNAGARVLVVCSEITVGT--------------FRAPSDENLS 144 (320)
Q Consensus 93 ~~a~~l~~~LGl~~~------~c~~~l~--------l~~~~~~~~LVv~~e~~s~~--------------~~~~~~~~~~ 144 (320)
..+.+|+..||++.. .|+++++ +++|..+.+||+++|..+.. ...|-|.
T Consensus 138 ~~a~~ia~~lgl~Gp~~~i~~acas~~~Al~~A~~~I~~G~~d~vlvgg~d~~~~~~~~~~~~~~~l~~~~~~Pfd~--- 214 (392)
T PRK09185 138 SLADFLRAYLGLSGPAYTISTACSSSAKVFASARRLLEAGLCDAAIVGGVDSLCRLTLNGFNSLESLSPQPCRPFSA--- 214 (392)
T ss_pred HHHHHHHHHhCCCCCcccccChhHHHHHHHHHHHHHHHcCCCCEEEEeeccccChHHHHHHHhccccCCCccCCCcC---
Confidence 467899999999653 3766543 78899999999999864321 0112221
Q ss_pred hhhhhhhhccCceEEEEeecCCCCCCCCeeEEeccCceecCCCcccccccccccceechhHHHHHHHHhhhcCCCCCCCC
Q 047978 145 CLVNRAIVGDGTAALIVGACPDINTERPLFHIVPTAQTILPDSEDAIKGHFRESPLIADNIDKFLAESFDQVSLNDHDWN 224 (320)
Q Consensus 145 ~~~~~~~~GDgAaA~ll~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~i~~~l~~~g~~~~d~~ 224 (320)
....+++||||+++||++.... ..++...+........ .....+ .....++++++++++|++++||
T Consensus 215 -~~~G~~~gEGaa~vVLe~~~~~-----~~~I~g~g~~~d~~~~----~~~~~~---~~~~~~a~~~Al~~Agl~~~dI- 280 (392)
T PRK09185 215 -NRDGINIGEAAAFFLLEREDDA-----AVALLGVGESSDAHHM----SAPHPE---GLGAILAMQQALADAGLAPADI- 280 (392)
T ss_pred -CCCccceeceEEEEEEEEcCCC-----cEEEEEEEEeCCCCCC----CCCCCC---HHHHHHHHHHHHHHcCCCHHHc-
Confidence 1247889999999999998322 1344332211111000 001111 2345678999999999999997
Q ss_pred ceEEEEcCCChhHHH-----HHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCCC---------
Q 047978 225 SLFWMMHPIGPAVLD-----QIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTG--------- 290 (320)
Q Consensus 225 ~~~~i~h~~~~~~~~-----~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G--------- 290 (320)
+++.+|-.+.+.-| .+.+.++-+. .+ .+ .-..+||+.+|+=.+.|...+... ++|.+.|-
T Consensus 281 -d~v~~hgtgt~~~D~~E~~al~~~f~~~~-pv-~s--~K~~~Gh~~~AaG~~~l~~~~~~l-~~~~ip~~~~~~~~~~~ 354 (392)
T PRK09185 281 -GYINLHGTATPLNDAMESRAVAAVFGDGV-PC-SS--TKGLTGHTLGAAGAVEAAICWLAL-RHGLPPHGWNTGQPDPA 354 (392)
T ss_pred -cEEEeCCCCCcCCCHHHHHHHHHHhCCCC-ce-eC--CCcccccChhhcchHHHHHHHHHH-hcCCCCCCCCCCCCCCC
Confidence 38899987655332 2344554211 12 22 245689999988777776544321 11332210
Q ss_pred C------------CCceEEEEeeccchhhhheeeee
Q 047978 291 E------------ELEWGVLLGFEAGLTVEAIVLRS 314 (320)
Q Consensus 291 ~------------~~d~vll~~~G~G~~~~a~~l~~ 314 (320)
. ..++++.-+||-|.+..+++++.
T Consensus 355 ~~~~~~~~~~~~~~~~~~l~~s~gfgG~n~~lvl~~ 390 (392)
T PRK09185 355 LPPLYLVENAQALAIRYVLSNSFAFGGNNCSLIFGR 390 (392)
T ss_pred CCccccCCCCccCCCCEEEEeCccCCceeEEEEEEe
Confidence 0 02678889999999999998875
No 80
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=98.92 E-value=5.6e-08 Score=92.41 Aligned_cols=98 Identities=15% Similarity=0.149 Sum_probs=68.2
Q ss_pred HHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHHHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCC
Q 047978 207 KFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGK 286 (320)
Q Consensus 207 ~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~ 286 (320)
..++.+++++|++++|++ ++=+|-......-...+.||+.++++-.+ --.--+||...|+=...+.+++.+.. +
T Consensus 295 ~a~~~al~~Agi~~~Did--~~Ei~d~f~~~~l~~~e~lg~~~~~vN~~-GG~l~~Ghp~gasG~~~~~~~~~~l~--~- 368 (394)
T PLN02644 295 LAIPKALKHAGLEASQVD--YYEINEAFSVVALANQKLLGLDPEKVNVH-GGAVSLGHPIGCSGARILVTLLGVLR--S- 368 (394)
T ss_pred HHHHHHHHHcCCCHHHCC--EEEeCcHHHHHHHHHHHHhCCCccccCCC-CChHhhCCCHHHHHHHHHHHHHHHHH--h-
Confidence 588999999999999973 77777776666666788999877665443 12334799999998888888887732 1
Q ss_pred CCCCCCCceEEEEeeccchhhhheeeee
Q 047978 287 ATTGEELEWGVLLGFEAGLTVEAIVLRS 314 (320)
Q Consensus 287 l~~G~~~d~vll~~~G~G~~~~a~~l~~ 314 (320)
+.| .+.+....++|...++++++.
T Consensus 369 -~~~---~~g~~~~~~~gg~g~a~~~e~ 392 (394)
T PLN02644 369 -KNG---KYGVAGICNGGGGASAIVVEL 392 (394)
T ss_pred -cCC---CeEEEEEeccCCceeEEEEEe
Confidence 233 556664555555555666664
No 81
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.86 E-value=7.7e-08 Score=90.95 Aligned_cols=289 Identities=15% Similarity=0.083 Sum_probs=165.0
Q ss_pred ccceEEccccccCCCcccccccHHHHHhhhcCC-chhHHH---HHH-HHHhhhcccchHHHHHHHHHHHHHHcCCCC--C
Q 047978 4 LGKFQETQRPQANPANCVYQTDYPDFYFRITSS-NHMTEL---KEK-FKRMYILVPKVPKLGKEAVSKAIKEWGQPI--S 76 (320)
Q Consensus 4 ~~~~~I~a~~~~lP~~~i~~~e~~~~~~~~~~~-~~~~gi---~~~-~r~~~~~~e~~~~la~~Aa~~aL~~ag~~~--~ 76 (320)
|.+|.|+++|..-|--. .+++-+.+..+.+. ...+.. ... .+.+.........++..|+++||+++|+++ +
T Consensus 1 ~~rVvITG~G~vsp~G~--~~~~~~~l~~G~sgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~Al~dagl~~~~~ 78 (381)
T PRK05952 1 MMKVVVTGIGLVSALGD--LEQSWQRLLQGKSGIKLHQPFPELPPLPLGLIGNQPSSLEDLTKTVVTAALKDAGLTPPLT 78 (381)
T ss_pred CCeEEEEeeEEECcccC--HHHHHHHHHcCCCCeEeCCcccccccccceeeccccccccHHHHHHHHHHHHhcCCCCCCC
Confidence 46899999999999876 56665555221110 000100 000 000000001123367789999999999864 5
Q ss_pred CcCEEEEEeeCC-----------------------------CCCC-CHHHHHHHHcCCCcc------hhhhhhh------
Q 047978 77 KITHLISCSVSG-----------------------------VDMP-GADYQLTKLLGLKPS------VKRVMLT------ 114 (320)
Q Consensus 77 dId~li~~s~t~-----------------------------~~~p-~~a~~l~~~LGl~~~------~c~~~l~------ 114 (320)
++. ++++|..+ ..+| ..+.+++..+|++.. .|++.+.
T Consensus 79 ~~G-v~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~~~~~Gp~~ti~~aCasg~~Ai~~A~ 157 (381)
T PRK05952 79 DCG-VVIGSSRGCQGQWEKLARQMYQGDDSPDEELDLENWLDTLPHQAAIAAARQIGTQGPVLAPMAACATGLWAIAQGV 157 (381)
T ss_pred CEE-EEEeeCcchHHHHHHHHHHHhhcCCccccccCHHHHHHhcccHHHHHHHHHhCCCCccccccchhHHHHHHHHHHH
Confidence 565 44444311 0122 246778888998753 3655432
Q ss_pred --hhcCCCCeEEEEEeec-cccc----c----------cCCCCCCchhhhhhhhhccCceEEEEeecCCC--CCCCCeeE
Q 047978 115 --AESNAGARVLVVCSEI-TVGT----F----------RAPSDENLSCLVNRAIVGDGTAALIVGACPDI--NTERPLFH 175 (320)
Q Consensus 115 --l~~~~~~~~LVv~~e~-~s~~----~----------~~~~~~~~~~~~~~~~~GDgAaA~ll~~~~~~--~~~~~~~~ 175 (320)
|+++..+.+||.++|. .++. | ..|-|. ...++++||||+++||++.+.. .-.+.+-+
T Consensus 158 ~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~rPfd~----~r~G~v~gEGaa~lvLe~~~~A~~rg~~i~a~ 233 (381)
T PRK05952 158 ELIQTGQCQRVIAGAVEAPITPLTLAGFQQMGALAKTGAYPFDR----QREGLVLGEGGAILVLESAELAQKRGAKIYGQ 233 (381)
T ss_pred HHHHcCCCCEEEEccccccCCHHHHHHHHhcCCcCCCCCCCCCC----CCCCccccccEEEEEEeeHHHHHhCCCceEEE
Confidence 7889999999999996 3210 0 012222 2247899999999999986542 11112233
Q ss_pred EeccCceecCCCcccccccccccceechhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHH-----HHHHcCCCcc
Q 047978 176 IVPTAQTILPDSEDAIKGHFRESPLIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQ-----IEGKLGLEKT 250 (320)
Q Consensus 176 ~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~-----~~~~lg~~~e 250 (320)
+...+......... ....+ .+...++++.+|+++|++++|+ .++-.|-.+.+.-|. +.+.++ +
T Consensus 234 I~g~~~~~d~~~~~----~~~~~---~~~~~~ai~~Al~~agi~p~dI--d~i~~hgtgt~~~D~~E~~al~~~fg---~ 301 (381)
T PRK05952 234 ILGFGLTCDAYHMS----APEPD---GKSAIAAIQQCLARSGLTPEDI--DYIHAHGTATRLNDQREANLIQALFP---H 301 (381)
T ss_pred EEEEEecCCCCCCC----CCCCC---HHHHHHHHHHHHHHhCCCHHHe--eEEEccCCCCCCCcHHHHHHHHHHcC---C
Confidence 43322111111000 01111 2456788999999999999986 388899877655433 344444 1
Q ss_pred hhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCCC-----------------C-CCceEEEEeeccchhhhheee
Q 047978 251 KLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTG-----------------E-ELEWGVLLGFEAGLTVEAIVL 312 (320)
Q Consensus 251 ~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G-----------------~-~~d~vll~~~G~G~~~~a~~l 312 (320)
++..+ .+-..+||+.+|+-.+.+...+... +++.+.|= . ..++++.-+||-|..-+++++
T Consensus 302 ~~~v~-s~K~~~GH~~~AaG~~~~~~~~~~l-~~~~ipp~~~~~~~~~~~~~v~~~~~~~~~~~l~~s~gfGG~na~lvl 379 (381)
T PRK05952 302 RVAVS-STKGATGHTLGASGALGVAFSLLAL-RHQQLPPCVGLQEPEFDLNFVRQAQQSPLQNVLCLSFGFGGQNAAIAL 379 (381)
T ss_pred CCeee-cchhhhccChHHHHHHHHHHHHHHH-hcCccCCCCCCCCCCCCCCcCCCcccCCCCEEEEeeecCCCeeEEEEE
Confidence 22221 1345689999998777776654321 11444320 0 115788899999988888887
Q ss_pred e
Q 047978 313 R 313 (320)
Q Consensus 313 ~ 313 (320)
+
T Consensus 380 ~ 380 (381)
T PRK05952 380 G 380 (381)
T ss_pred e
Confidence 6
No 82
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=98.85 E-value=5.3e-08 Score=93.17 Aligned_cols=241 Identities=14% Similarity=0.098 Sum_probs=141.3
Q ss_pred hHHHHHHHHHHHHHHcCCC---CCCcCEEEEEeeC---------------C-CCCC---------CHHHHHHHHcCCCcc
Q 047978 56 VPKLGKEAVSKAIKEWGQP---ISKITHLISCSVS---------------G-VDMP---------GADYQLTKLLGLKPS 107 (320)
Q Consensus 56 ~~~la~~Aa~~aL~~ag~~---~~dId~li~~s~t---------------~-~~~p---------~~a~~l~~~LGl~~~ 107 (320)
...|+..|+++||+++|++ +++|+.++.++.. + +..| ..+.+|+..||++..
T Consensus 80 ~~~lal~Aa~eAl~dAgl~~~~~~riGvivG~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~G~ 159 (410)
T PRK07103 80 SAQAALAAAREAWRDAALGPVDPDRIGLVVGGSNLQQREQALVHETYRDRPAFLRPSYGLSFMDTDLVGLCSEQFGIRGE 159 (410)
T ss_pred HHHHHHHHHHHHHHhcCcCCCCCCCEEEEEccCCcchHHHHHHHHHhccCccccChhhhhhhcchHHHHHHHHHhCCCCC
Confidence 4679999999999999986 5677766654321 1 1112 256778899999643
Q ss_pred ------hhhhhhh--------hhcCCCCeEEEEEeecc-ccc----------------------ccCCCCCCchhhhhhh
Q 047978 108 ------VKRVMLT--------AESNAGARVLVVCSEIT-VGT----------------------FRAPSDENLSCLVNRA 150 (320)
Q Consensus 108 ------~c~~~l~--------l~~~~~~~~LVv~~e~~-s~~----------------------~~~~~~~~~~~~~~~~ 150 (320)
.|++.+. |+++..+.+||+++|.. +.. ...|-|+ ...++
T Consensus 160 ~~tv~~acas~~~Al~~A~~~I~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~rPfd~----~~dG~ 235 (410)
T PRK07103 160 GFTVGGASASGQLAVIQAARLVQSGSVDACIAVGALMDLSYWECQALRSLGAMGSDRFADEPEAACRPFDQ----DRDGF 235 (410)
T ss_pred cccccchhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHccccccCccCCCcccCcCCCCC----CCCCe
Confidence 3665433 78999999999988632 100 0012221 22478
Q ss_pred hhccCceEEEEeecCCCC--CCCCeeEEeccCceecCCCcccccccccccceechhHHHHHHHHhhhcCCCCCCCCceEE
Q 047978 151 IVGDGTAALIVGACPDIN--TERPLFHIVPTAQTILPDSEDAIKGHFRESPLIADNIDKFLAESFDQVSLNDHDWNSLFW 228 (320)
Q Consensus 151 ~~GDgAaA~ll~~~~~~~--~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~i~~~l~~~g~~~~d~~~~~~ 228 (320)
++||||+++||++.+... -...+.++...+...-... ....+ .....++++.+++++|++++|| +++
T Consensus 236 v~gEGaaalvLe~~~~A~~~g~~i~a~I~g~~~~~d~~~------~~~p~---~~~~~~a~~~Al~~Agi~~~dI--d~v 304 (410)
T PRK07103 236 IYGEACGAVVLESAESARRRGARPYAKLLGWSMRLDANR------GPDPS---LEGEMRVIRAALRRAGLGPEDI--DYV 304 (410)
T ss_pred eEeeeEEEEEEccHHHHHHCCCceEEEEEEEEEecCCCC------CCCCC---HHHHHHHHHHHHHHcCCCHHHC--CEE
Confidence 999999999999865421 0112233333221110000 00111 2345678899999999999987 388
Q ss_pred EEcCCChhHHHHHH-HH-cCCCcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCC-----------------
Q 047978 229 MMHPIGPAVLDQIE-GK-LGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATT----------------- 289 (320)
Q Consensus 229 i~h~~~~~~~~~~~-~~-lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~----------------- 289 (320)
..|-.+....|..+ +. ++.....++.+ ..-..+||+.+|+-.+.|...+-.. ++|.+.|
T Consensus 305 ~~hgtgt~~~D~~E~~al~~~~~~~~~v~-s~k~~~Gh~~~AsG~~~l~~~~l~l-~~~~ipp~~~~~~~~~~~~~~v~~ 382 (410)
T PRK07103 305 NPHGTGSPLGDETELAALFASGLAHAWIN-ATKSLTGHGLSAAGIVELIATLLQM-RAGFLHPSRNLDEPIDERFRWVGS 382 (410)
T ss_pred EccCCCCCCCCHHHHHHHhcCCCCCCeEE-CCCcccccCchhhhHHHHHHHHHHH-hCCeeCCCCCCCCCCCCCcCccCC
Confidence 99987765443331 11 22111122221 0244579999988887776553221 1133211
Q ss_pred --C-CCCceEEEEeeccchhhhheeee
Q 047978 290 --G-EELEWGVLLGFEAGLTVEAIVLR 313 (320)
Q Consensus 290 --G-~~~d~vll~~~G~G~~~~a~~l~ 313 (320)
- ...++++.-+||.|.+..+++++
T Consensus 383 ~~~~~~~~~~l~~s~gfGG~n~~~vl~ 409 (410)
T PRK07103 383 TAESARIRYALSLSFGFGGINTALVLE 409 (410)
T ss_pred CCcCCCCCEEEEecccCCCceEEEEEe
Confidence 0 01157788899999888888886
No 83
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=98.85 E-value=1.5e-07 Score=89.16 Aligned_cols=240 Identities=11% Similarity=0.003 Sum_probs=142.2
Q ss_pred ccchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCC-CC-CCCHHHHHHHHcCCCcc--------hhhhhhh--------
Q 047978 53 VPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSG-VD-MPGADYQLTKLLGLKPS--------VKRVMLT-------- 114 (320)
Q Consensus 53 ~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~-~~-~p~~a~~l~~~LGl~~~--------~c~~~l~-------- 114 (320)
+.++.+|+.+|++++|+++|++|+|||.+++++... .. ....+..+...+|++.. .|++-+.
T Consensus 23 ~~~~~eL~~~a~~~aL~~agi~~~~Id~v~~G~~~~~~~q~~~~ar~~~l~~Gl~~~~p~~tV~~~CaSG~~A~~~A~~~ 102 (387)
T PRK07850 23 GLHAAELLGAVQRAVLDRAGIDPGDVEQVIGGCVTQAGEQSNNITRTAWLHAGLPYHVGATTIDCQCGSAQQANHLVAGL 102 (387)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchHHHHHHHhCCCCCCCceEEEecccccHHHHHHHHHHH
Confidence 557899999999999999999999999999987654 22 12344566667899742 2653211
Q ss_pred hhcCCCCeEEEEEeeccccc-cc-C-------CCC----CC------------------chh------------------
Q 047978 115 AESNAGARVLVVCSEITVGT-FR-A-------PSD----EN------------------LSC------------------ 145 (320)
Q Consensus 115 l~~~~~~~~LVv~~e~~s~~-~~-~-------~~~----~~------------------~~~------------------ 145 (320)
+++|..+.+|+++.|+.|.. +. . ..+ .. +++
T Consensus 103 I~sG~~dvvla~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~m~~~ae~~~~~ygisre~~d~~a~~sh~~a~~A~~~ 182 (387)
T PRK07850 103 IAAGAIDVGIACGVEAMSRVPLGANAGPGRGLPRPDSWDIDMPNQFEAAERIAKRRGITREDVDAFGLRSQRRAAQAWAE 182 (387)
T ss_pred HHCCCCCEEEEEeEecCCCCcccccccccccCccccccccCcchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHc
Confidence 78999999999999998641 00 0 000 00 000
Q ss_pred -----------------------------------------------h--------hhhhhhccCceEEEEeecCCC-CC
Q 047978 146 -----------------------------------------------L--------VNRAIVGDGTAALIVGACPDI-NT 169 (320)
Q Consensus 146 -----------------------------------------------~--------~~~~~~GDgAaA~ll~~~~~~-~~ 169 (320)
. .+.+..+|||+|+||.+++.. ..
T Consensus 183 g~f~~ei~pv~~~~~~~~~np~~~~~~~~~D~~~r~~t~e~l~~l~p~~~~~~~t~~~~~~~sDGAaa~vl~see~A~~l 262 (387)
T PRK07850 183 GRFDREISPVQAPVLDEEGQPTGETRLVTRDQGLRDTTMEGLAGLKPVLEGGIHTAGTSSQISDGAAAVLWMDEDRARAL 262 (387)
T ss_pred CCCcceeeeEeecccccccccCCCceEeecCCCcccCCHHHhccCCCCCCCCCccchhcCCcCCceEEEEEecHHHHHHc
Confidence 0 011123345555544433221 00
Q ss_pred -CCCeeEEeccCceecCCCcccccccccccceechhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHHHHHHcCCC
Q 047978 170 -ERPLFHIVPTAQTILPDSEDAIKGHFRESPLIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLE 248 (320)
Q Consensus 170 -~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~ 248 (320)
.++..++.+.+..... ...........++.+++++|++++|+| .+=+|-......-...+.+|++
T Consensus 263 ~~~p~~~i~g~~~~~~~------------~~~~~~~~~~a~~~al~~agl~~~did--~~ei~d~F~~~~l~~~e~lg~~ 328 (387)
T PRK07850 263 GLRPRARIVAQALVGAE------------PYYHLDGPVQATAKVLEKAGMKIGDID--LVEINEAFASVVLSWAQVHEPD 328 (387)
T ss_pred CCCCcEEEEEEEEeccC------------chhhcchHHHHHHHHHHHcCCCHHHcC--eeeecccchHHHHHHHHHcCCC
Confidence 0111222221110000 001123345788999999999999973 7777887766666667899987
Q ss_pred cchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCCCCCCceEEEEeeccchhhhheeeee
Q 047978 249 KTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEAIVLRS 314 (320)
Q Consensus 249 ~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~~l~~ 314 (320)
.+++-.+ --.--+||...|+=...+.+++.+.. -+.| .+.+....++|..-.+++++.
T Consensus 329 ~~pvN~~-GG~la~Ghp~gatG~~~v~e~~~qL~----~~~~---~~g~~~~c~~gg~g~a~~~e~ 386 (387)
T PRK07850 329 MDKVNVN-GGAIALGHPVGSTGARLITTALHELE----RTDK---STALITMCAGGALSTGTIIER 386 (387)
T ss_pred CCCcCCC-CchhhcCCCcchhHHHHHHHHHHHHH----hcCC---CeEEEEEccccCceeEEEEEe
Confidence 7654332 11334799999888888888877632 1223 455555455555555566664
No 84
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=98.84 E-value=8.2e-08 Score=90.95 Aligned_cols=81 Identities=12% Similarity=0.004 Sum_probs=64.6
Q ss_pred ccchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCC-CCCCCHHHHHHHHcCCCcc--------hhhhhhh--------h
Q 047978 53 VPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSG-VDMPGADYQLTKLLGLKPS--------VKRVMLT--------A 115 (320)
Q Consensus 53 ~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~-~~~p~~a~~l~~~LGl~~~--------~c~~~l~--------l 115 (320)
+.++.+|+..|++++|+++|++|++||.+|+++... ..-+..+..+...+|++.. .|++-+. +
T Consensus 24 ~~~~~~L~~~a~~~al~~agi~~~~Id~vv~G~~~~~~~g~~~~r~~~~~~Gl~~~~p~~~V~~~CaSG~~Ai~~A~~~I 103 (392)
T PRK06633 24 TTPAPMLAAHLIKDILQNSKIDPALVNEVILGQVITGGSGQNPARQTLIHAGIPKEVPGYTINKVCGSGLKSVALAANSI 103 (392)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCccccccHHHHHHHHHCCCCCCccchhhcchhHHHHHHHHHHHHHH
Confidence 678999999999999999999999999999988765 3333456667888999852 2543211 7
Q ss_pred hcCCCCeEEEEEeecccc
Q 047978 116 ESNAGARVLVVCSEITVG 133 (320)
Q Consensus 116 ~~~~~~~~LVv~~e~~s~ 133 (320)
++|..+.+|+++.|+.|.
T Consensus 104 ~sG~~dvvla~G~E~ms~ 121 (392)
T PRK06633 104 MTGDNEIVIAGGQENMSL 121 (392)
T ss_pred HcCCCCEEEEcccccCCC
Confidence 889999999999998873
No 85
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=98.84 E-value=1e-07 Score=90.48 Aligned_cols=81 Identities=11% Similarity=-0.043 Sum_probs=66.1
Q ss_pred ccchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCC-CC-CCCHHHHHHHHcCCCcch--------hhhhhh--------
Q 047978 53 VPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSG-VD-MPGADYQLTKLLGLKPSV--------KRVMLT-------- 114 (320)
Q Consensus 53 ~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~-~~-~p~~a~~l~~~LGl~~~~--------c~~~l~-------- 114 (320)
+.++.+|+..+.+.+|++++++|++||.||++...+ -. .+..+.+..-..|++..+ |.+-+.
T Consensus 26 ~~~~~~L~~~~~~~~l~r~~i~~~~id~vi~G~~~~~g~~g~n~aR~~al~aglp~~vp~~tvnr~C~Sgl~ai~~aa~~ 105 (417)
T PRK06025 26 HLHPQHLAATVLKALAERNGLNTADVDDIIWSTSSQRGKQGGDLGRMAALDAGYDIKASGVTLDRFCGGGITSVNLAAAQ 105 (417)
T ss_pred CCCHHHHHHHHHHHHHHhcCCCHHHCCEEEEEcCCCcCcccCcHHHHHHHhCCCCCCCCeeeeccccchHHHHHHHHHHH
Confidence 668899999999999999999999999999998876 22 467788888888998753 654222
Q ss_pred hhcCCCCeEEEEEeecccc
Q 047978 115 AESNAGARVLVVCSEITVG 133 (320)
Q Consensus 115 l~~~~~~~~LVv~~e~~s~ 133 (320)
+++|..+-+|..+.|..|.
T Consensus 106 I~~G~~~~~laGG~EsmS~ 124 (417)
T PRK06025 106 IMSGMEDLVIAGGTEMMSY 124 (417)
T ss_pred HHcCCCCEEEEeeeeccCC
Confidence 7788888899998998874
No 86
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=98.84 E-value=1.6e-07 Score=87.96 Aligned_cols=210 Identities=16% Similarity=0.138 Sum_probs=130.5
Q ss_pred ccchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCc-c-------hhhhhhh--------hh
Q 047978 53 VPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKP-S-------VKRVMLT--------AE 116 (320)
Q Consensus 53 ~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~-~-------~c~~~l~--------l~ 116 (320)
+.++.+|+..|.+++++ |++ ++||.+|++++... ....+..+...+|++. . .|++-+. ++
T Consensus 22 ~~~~~~L~~~a~~~~~~--gi~-~~Id~vi~G~~~~~-~~~~~r~~~~~~Gl~~~~p~~tV~~~CaSG~~Ai~~a~~~I~ 97 (361)
T PRK06690 22 DYEVQQLAAPLLTFLSK--GME-REIDDVILGNVVGP-GGNVARLSALEAGLGLHIPGVTIDRQCGAGLEAIRTACHFIQ 97 (361)
T ss_pred CCCHHHHHHHHHHHHHc--cch-hhcCEEEEEecCCC-cchHHHHHHHHcCCCCCCCceehhhhhhHHHHHHHHHHHHHH
Confidence 45679999999999866 886 89999999987652 1333445788899983 2 2543211 78
Q ss_pred cCCCCeEEEEEeeccccc-cc--C------CCCCC---------------chh---------------------------
Q 047978 117 SNAGARVLVVCSEITVGT-FR--A------PSDEN---------------LSC--------------------------- 145 (320)
Q Consensus 117 ~~~~~~~LVv~~e~~s~~-~~--~------~~~~~---------------~~~--------------------------- 145 (320)
+|..+.+|+++.|..|.. +. . +.+.. +++
T Consensus 98 sG~~d~~l~gG~E~ms~~p~~~~~~~~~~~~~~~~~~~~a~~~~~~ygitre~~d~~A~~s~k~a~~a~~n~~~~~ei~~ 177 (361)
T PRK06690 98 GGAGKCYIAGGVESTSTSPFQNRARFSPETIGDPDMGVAAEYVAERYNITREMQDEYACLSYKRTLQALEKGYIHEEILS 177 (361)
T ss_pred CCCCCEEEEeccccccCCCcccccccCcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCceec
Confidence 899999999999988741 10 0 00000 000
Q ss_pred --------h-h--------h--hhh--------------hccCceEEEEeecCCC-CC-CCCeeEEeccCceecCCCccc
Q 047978 146 --------L-V--------N--RAI--------------VGDGTAALIVGACPDI-NT-ERPLFHIVPTAQTILPDSEDA 190 (320)
Q Consensus 146 --------~-~--------~--~~~--------------~GDgAaA~ll~~~~~~-~~-~~~~~~~~~~~~~~~p~~~~~ 190 (320)
. . . ... .+|||+|+||.+++.. .. ..+..++...+......
T Consensus 178 v~~~~d~~~r~~~~~e~ll~~l~p~~~~~g~lt~~~~~~~~DGAaAvvl~s~e~A~~lg~~p~~~i~~~~~~~~~~---- 253 (361)
T PRK06690 178 FNGLLDESIKKEMNYERIIKRTKPAFLHNGTVTAGNSCGVNDGACAVLVMEEGQARKLGYKPVLRFVRSAVVGVDP---- 253 (361)
T ss_pred ccCccccccCCCCCHHHHhhcCCCcccCCCceeccccCCCCCCeEEEEEecHHHHHHcCCCceEEEEEEEEeccCc----
Confidence 0 0 0 012 2577777777654321 00 11222232211110000
Q ss_pred ccccccccceechhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHHHHHHcCCCcchhhhh---HHHHhccCCccc
Q 047978 191 IKGHFRESPLIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKTKLRET---RHVLSEYGNMAS 267 (320)
Q Consensus 191 ~~~~~~~~g~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e~~~~~---~~~~~~~Gn~~s 267 (320)
. .........++.+++++|++++|+ ++|.+|+.+........+.||++++++-.+ ....+.+|++|+
T Consensus 254 -----~---~~~~~~~~a~~~al~~Agl~~~Di--d~~ei~eafa~~~~~~~e~lgl~~~~vn~~GG~la~Ghp~GatG~ 323 (361)
T PRK06690 254 -----N---LPGTGPIFAVNKLLNEMNMKVEDI--DYFEINEAFASKVVACAKELQIPYEKLNVNGGAIALGHPYGASGA 323 (361)
T ss_pred -----c---cchhHHHHHHHHHHHHcCCCHHHc--CEeeecchhHHHHHHHHHhcCCCchhcccCCcHHhccCchhhhHH
Confidence 0 111234568899999999999987 389999999999999999999988766441 112566788888
Q ss_pred chHHHHHHHHHHh
Q 047978 268 ATVLFVLDEMRKR 280 (320)
Q Consensus 268 asi~~~L~~~~~~ 280 (320)
..++..+.++.+.
T Consensus 324 ~~~~~~~~ql~~~ 336 (361)
T PRK06690 324 MLVTRLFYQAKRE 336 (361)
T ss_pred HHHHHHHHHHHHh
Confidence 7777777766543
No 87
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=98.82 E-value=5.2e-07 Score=85.26 Aligned_cols=222 Identities=16% Similarity=0.068 Sum_probs=131.9
Q ss_pred cccchHHHHHHHHHHHHHHcC-CCC-CCcCEEEEEeeCCC-CCCCHHHHHHHHcCCC--cc--hhhh----hhh----hh
Q 047978 52 LVPKVPKLGKEAVSKAIKEWG-QPI-SKITHLISCSVSGV-DMPGADYQLTKLLGLK--PS--VKRV----MLT----AE 116 (320)
Q Consensus 52 ~~e~~~~la~~Aa~~aL~~ag-~~~-~dId~li~~s~t~~-~~p~~a~~l~~~LGl~--~~--~c~~----~l~----l~ 116 (320)
++.+..+|+.+|+++||+++| +++ +|||.+++++...+ ........+++.||+. +. .|++ +.. ++
T Consensus 21 ~~~s~~eL~~eA~~~Al~DAG~l~~~~dId~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~v~~sg~~a~~~A~~aV~ 100 (385)
T PRK06066 21 PEVSFREMMFEAASRAYKDAGNINPRRDVDSFISCQEDFWEGIAIADEFAPDQIGGAMRPTMTVAGDGLQGLAHAVMHIN 100 (385)
T ss_pred CCCCHHHHHHHHHHHHHHhcCCCCChhcCCEEEEecCcccCcccccchhHHHHcccCCCCeEEEeCcHHHHHHHHHHHHH
Confidence 367889999999999999999 997 79999987532111 1112234577888883 22 2432 111 78
Q ss_pred cCCCCeEEEEEeecccc--c------------ccCCCCCC----------------------------------------
Q 047978 117 SNAGARVLVVCSEITVG--T------------FRAPSDEN---------------------------------------- 142 (320)
Q Consensus 117 ~~~~~~~LVv~~e~~s~--~------------~~~~~~~~---------------------------------------- 142 (320)
+|.+++|||++.|+.+. . |..|....
T Consensus 101 sG~~d~vLv~g~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~p~~~~al~a~rym~~yG~t~E~lA~Vavk~r~nA~~NP~ 180 (385)
T PRK06066 101 SGLANVVVVEAHSKPSDILTFSDVVKFAMDPIYVRPIGPPNPHFIAGLDAVKFMSRKGITREDLALVVEKNKKAGLSNPR 180 (385)
T ss_pred cCCCCEEEEEEEeeccCccchhhhhhcccCcceecccCCCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHhcCCh
Confidence 99999999999986532 0 00010000
Q ss_pred --------chh------------hhhhhhhccCceEEEEeecCCC-CC-CCCeeEEeccCceecCCCcccccccccccce
Q 047978 143 --------LSC------------LVNRAIVGDGTAALIVGACPDI-NT-ERPLFHIVPTAQTILPDSEDAIKGHFRESPL 200 (320)
Q Consensus 143 --------~~~------------~~~~~~~GDgAaA~ll~~~~~~-~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~ 200 (320)
.++ ...++..+|||+|+||.+++.. .. .++. .+...+.......... ... .
T Consensus 181 A~~r~~~t~edvl~S~~ia~Pl~~~d~~~~~DGAaAvvl~s~~~a~~l~~~pv-~I~g~g~~~~~~~~~~-----~~~-~ 253 (385)
T PRK06066 181 ASYASNISLEDVLSSEYVVYPLTELDIAPFVDGAIVVVLASEEVAKKLTDDPV-WIKGIGWSTESSNLET-----AEL-G 253 (385)
T ss_pred hhcCCCCCHHHHhcCCcccCCchhhccCCCCCceEEEEEeCHHHHHhcCCCCE-EEEEEEEecCCccccc-----ccc-c
Confidence 011 1334567899999999876532 11 1232 4433222110000000 000 1
Q ss_pred echhHHHHHHHHhhhcCCC--CCCCCceEEEEcCCChhHHHHHHHHcCCCc--ch--------------hhhh-HHHHhc
Q 047978 201 IADNIDKFLAESFDQVSLN--DHDWNSLFWMMHPIGPAVLDQIEGKLGLEK--TK--------------LRET-RHVLSE 261 (320)
Q Consensus 201 ~~~~~~~~i~~~l~~~g~~--~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~--e~--------------~~~~-~~~~~~ 261 (320)
.........+.+++++|++ ++|+| .+-+|-......-...+.||+.+ |. ++.| .-=.-.
T Consensus 254 ~~~~~~~Aa~~a~~~AGi~~p~~DiD--~~ei~D~Ft~~~l~~~e~lG~~~~Ge~~~~v~~G~~~~~G~~PvN~~GG~la 331 (385)
T PRK06066 254 KANYMRIAADMAYKMAGIESPRKEVD--AAEVDDRYSYKELQHIEALRLSEEPEKDSLLREGNFDPQGELPVNPSGGHLA 331 (385)
T ss_pred ccHHHHHHHHHHHHHcCCCCCHHHCc--EEEEecCChHHHHHHHHHcCCCCCCchHHHHHCCCCCCCCCccccCCCchhc
Confidence 1233346889999999998 68873 77888877666667788999875 32 1111 000122
Q ss_pred cCCcccchHHHHHHHHHHhch
Q 047978 262 YGNMASATVLFVLDEMRKRSV 282 (320)
Q Consensus 262 ~Gn~~sasi~~~L~~~~~~~~ 282 (320)
+||...|+=+..+.++..+..
T Consensus 332 ~Ghp~gatG~~~v~e~~~QL~ 352 (385)
T PRK06066 332 KGVPLEASGLSLLLDAVEYLR 352 (385)
T ss_pred CCCccchhHHHHHHHHHHHHc
Confidence 699988887888888877644
No 88
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=98.80 E-value=1.8e-07 Score=88.93 Aligned_cols=81 Identities=14% Similarity=0.055 Sum_probs=66.0
Q ss_pred ccchHHHHHHHHHHHHHH-cCCCCCCcCEEEEEeeCC--CCCCCHHHHHHHHcCCCcc--------hhhhhhh-------
Q 047978 53 VPKVPKLGKEAVSKAIKE-WGQPISKITHLISCSVSG--VDMPGADYQLTKLLGLKPS--------VKRVMLT------- 114 (320)
Q Consensus 53 ~e~~~~la~~Aa~~aL~~-ag~~~~dId~li~~s~t~--~~~p~~a~~l~~~LGl~~~--------~c~~~l~------- 114 (320)
+.++.+|+..|++++|++ +|++|++||.+|++++.+ ..-+..+..+...+|++.. .|++-+.
T Consensus 23 ~~~~~~L~~~a~~~al~r~a~i~~~~Id~vi~G~~~~~~~~g~~~ar~~~l~~Gl~~~vp~~tV~~~CaSG~~Av~~A~~ 102 (400)
T PRK13359 23 SVRADDLGAVPLKALVERNPDVDWAAIDDVIYGCANQAGEDNRNVARMSLLLAGLPHGVPGSTINRLCGSGMDAVGVAAR 102 (400)
T ss_pred CCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCceEEEeccchhHHHHHHHHHH
Confidence 457799999999999997 599999999999998876 2236778889999999863 2654221
Q ss_pred -hhcCCCCeEEEEEeecccc
Q 047978 115 -AESNAGARVLVVCSEITVG 133 (320)
Q Consensus 115 -l~~~~~~~~LVv~~e~~s~ 133 (320)
+++|..+.+|+++.|..|.
T Consensus 103 ~I~sG~~divlagGvEsmS~ 122 (400)
T PRK13359 103 AIKSGEAALMIAGGVESMSR 122 (400)
T ss_pred HHHcCCCCEEEEeeeeccCC
Confidence 7889999999999998875
No 89
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=98.79 E-value=3.4e-07 Score=86.72 Aligned_cols=238 Identities=14% Similarity=0.076 Sum_probs=141.4
Q ss_pred cccchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcch-------hhhh---hh-----hh
Q 047978 52 LVPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPSV-------KRVM---LT-----AE 116 (320)
Q Consensus 52 ~~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~~-------c~~~---l~-----l~ 116 (320)
++.+..+|+.+|+++||+++|++++|||.++..+..+.. ....+++.||++... |++. +. ++
T Consensus 21 ~~~~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~~~~---~~~~~~~~lGl~~~~~~~v~~gg~s~~~a~~~A~~~I~ 97 (388)
T PRK08142 21 PDKSVAQLHAEVAKGALADAGLSLADVDGYFCAGDAPGL---GPASMVDYLGLKLRHVDSTETGGSSYLAHVGHAAQAIA 97 (388)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCCCc---cHHHHHHhCCCCCeeeccccCCcHHHHHHHHHHHHHHH
Confidence 366789999999999999999999999997642211111 124599999996532 3321 22 78
Q ss_pred cCCCCeEEEEEeecccccc---------c---------CCCCCC------------------------------------
Q 047978 117 SNAGARVLVVCSEITVGTF---------R---------APSDEN------------------------------------ 142 (320)
Q Consensus 117 ~~~~~~~LVv~~e~~s~~~---------~---------~~~~~~------------------------------------ 142 (320)
+|..+.|||++.|+.+... . .|....
T Consensus 98 sG~~d~vLvvg~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~Al~a~~ym~~yG~t~e~la~vav~~~~~A~~ 177 (388)
T PRK08142 98 AGKCSVALITLAGRPRSEGSSGTEPRNWGADAPDAPFEAPYGPTTHNLYAMCAMRHMHEYGTTSEQLAWIKVAASHHAQH 177 (388)
T ss_pred cCCCCEEEEEeeeecccCCccccccccccccccccchhcccccccHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHhcc
Confidence 9999999999999753110 0 000000
Q ss_pred -----------chh------------hhhhhhhccCceEEEEeecCCC-CCCCCeeEEeccCceecCCCccccccccccc
Q 047978 143 -----------LSC------------LVNRAIVGDGTAALIVGACPDI-NTERPLFHIVPTAQTILPDSEDAIKGHFRES 198 (320)
Q Consensus 143 -----------~~~------------~~~~~~~GDgAaA~ll~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 198 (320)
.++ +..++..+|||+|+||.+++.. ....+...+...+....+.... +.+
T Consensus 178 NP~A~~r~~~t~e~vl~s~~Ia~Pl~l~d~~~~~DGAaA~vl~s~~~A~~l~~~~v~I~g~~~~~~~~~~~------~~~ 251 (388)
T PRK08142 178 NPHAMLRDVVTVEDVLNSPMIADPLHRLDCCVVTDGGGALVVVRPEIARSLKRPLVKVLGAGEAIKGQMGG------KVD 251 (388)
T ss_pred CChhhcCCCCCHHHHhcCCcccCCchhhccCcccCceEEEEEecHHHHhhcCCCCEEEEEEEEecCCcccc------Ccc
Confidence 000 1223456899999999976532 1111223443332221111000 000
Q ss_pred ceechhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHHHHHHcCCCcc-----------------hhhhhH-HHHh
Q 047978 199 PLIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKT-----------------KLRETR-HVLS 260 (320)
Q Consensus 199 g~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e-----------------~~~~~~-~~~~ 260 (320)
+........++.+++++|++++|+| .+=+|-......-...+.||+-+. +++.|. -=+.
T Consensus 252 -~~~~~~~~aa~~a~~~AGi~~~did--~~elyD~Fs~~~~~~~E~lGl~~~Ge~~~~v~~g~~~~~~G~lPvN~sGG~l 328 (388)
T PRK08142 252 -LTYSGAAWSGPAAFAEAGVTPADIK--YASIYDSFTITVLMQLEDLGFCKKGEGGKFVADGNLISGVGKLPFNTDGGGL 328 (388)
T ss_pred -cccHHHHHHHHHHHHHcCCCHHHCC--EEEEeccchHHHHHHHHHcCCCCCCchHHHHHCCCcccCCCCccccCCChhh
Confidence 1123345688999999999999973 778888776666667788987432 122110 0122
Q ss_pred ccCCcccchHHHHHHHHHHhchhc--C--CCCCCCCCceEEEEeeccc
Q 047978 261 EYGNMASATVLFVLDEMRKRSVEE--G--KATTGEELEWGVLLGFEAG 304 (320)
Q Consensus 261 ~~Gn~~sasi~~~L~~~~~~~~~~--g--~l~~G~~~d~vll~~~G~G 304 (320)
-.||...|+-+..+.++..+..++ + +++ | .++.|..+.|..
T Consensus 329 ~~G~p~gatG~~~~~E~~~QLrG~ag~~rQV~-~--a~~gl~~~~Gg~ 373 (388)
T PRK08142 329 CNNHPANRGGMTKVIEAVRQLRGEAHPAVQVP-N--CDLALAHGTGGL 373 (388)
T ss_pred cCCCcCcccHHHHHHHHHHHHcCCCCCCCCCC-C--CcEEEEeCCCCC
Confidence 258988888888888887775422 1 121 2 156666666643
No 90
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.78 E-value=1.6e-07 Score=90.29 Aligned_cols=243 Identities=15% Similarity=0.145 Sum_probs=141.3
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCc-C----EEEEEeeCC-C---------------------CCC-----CHHHHHHHHcC
Q 047978 56 VPKLGKEAVSKAIKEWGQPISKI-T----HLISCSVSG-V---------------------DMP-----GADYQLTKLLG 103 (320)
Q Consensus 56 ~~~la~~Aa~~aL~~ag~~~~dI-d----~li~~s~t~-~---------------------~~p-----~~a~~l~~~LG 103 (320)
...|+..|++++|+++|++++++ + .+++++... + ..| ..+.+|...+|
T Consensus 82 ~~~l~~~aa~~Al~dAgl~~~~~~~~~~~Gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g 161 (424)
T PRK06333 82 FILFAMAAAKEALAQAGWDPDTLEDRERTATIIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAAGHVSIRYG 161 (424)
T ss_pred HHHHHHHHHHHHHHhcCCCccccCCcccEEEEEecCcccHHHHHHHHHHHHhcCCcccChhHHhhhhhhHHHHHHHHHhC
Confidence 45689999999999999987776 3 355555422 1 111 23568888999
Q ss_pred CCcc------hhhhhhh--------hhcCCCCeEEEEEeeccccc-----------c-----------cCCCCCCchhhh
Q 047978 104 LKPS------VKRVMLT--------AESNAGARVLVVCSEITVGT-----------F-----------RAPSDENLSCLV 147 (320)
Q Consensus 104 l~~~------~c~~~l~--------l~~~~~~~~LVv~~e~~s~~-----------~-----------~~~~~~~~~~~~ 147 (320)
++.. .|++.+. |++|..+.+||.++|..... + ..|-|. ..
T Consensus 162 l~Gp~~~v~~aCaSg~~Al~~A~~~I~~G~~d~alvgG~e~~~~~~~~~~f~~~~~l~~~~~~~p~~~~~Pfd~----~~ 237 (424)
T PRK06333 162 FKGPLGAPVTACAAGVQAIGDAARLIRSGEADVAVCGGTEAAIDRVSLAGFAAARALSTRFNDAPEQASRPFDR----DR 237 (424)
T ss_pred CCCCCccccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHcccccccCCCCCCcCCCCCCC----CC
Confidence 8653 3665332 78999999999999973210 0 012121 22
Q ss_pred hhhhhccCceEEEEeecCCC--CCCCCeeEEeccCceecCCCcccccccccccceechhHHHHHHHHhhhcCCCCCCCCc
Q 047978 148 NRAIVGDGTAALIVGACPDI--NTERPLFHIVPTAQTILPDSEDAIKGHFRESPLIADNIDKFLAESFDQVSLNDHDWNS 225 (320)
Q Consensus 148 ~~~~~GDgAaA~ll~~~~~~--~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~i~~~l~~~g~~~~d~~~ 225 (320)
.+++.||||+++||++.+.. .-.+.+.++...+....... +. ....+ .....++++.+++++|++++||
T Consensus 238 ~G~~~gEGaa~lvLe~~~~A~~rg~~i~a~i~G~~~~~d~~~---~~-~~~~~---~~~~~~a~~~Al~~Agi~p~dI-- 308 (424)
T PRK06333 238 DGFVMGEGAGILVIETLEHALARGAPPLAELVGYGTSADAYH---MT-AGPED---GEGARRAMLIALRQAGIPPEEV-- 308 (424)
T ss_pred CCeEEecceEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCC---CC-CCCCC---cHHHHHHHHHHHHHcCCCHHHC--
Confidence 46789999999999986542 10111223333221100000 00 00111 2556788999999999999986
Q ss_pred eEEEEcCCChhHH-----HHHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCC-----------
Q 047978 226 LFWMMHPIGPAVL-----DQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATT----------- 289 (320)
Q Consensus 226 ~~~i~h~~~~~~~-----~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~----------- 289 (320)
.++-.|-.+...- ..+.+.++ +...+..+ ..-..+||+.+|+=.+.+...+... ++|.+.|
T Consensus 309 d~i~~hgtgt~~~D~~E~~al~~~fg-~~~~~~v~-s~K~~~GH~~gAaG~~~~~~~~l~l-~~g~ipp~~~~~~~~~~~ 385 (424)
T PRK06333 309 QHLNAHATSTPVGDLGEVAAIKKVFG-HVSGLAVS-STKSATGHLLGAAGGVEAIFTILAL-RDQIAPPTLNLENPDPAA 385 (424)
T ss_pred CEEeccCCCCccchHHHHHHHHHHhC-CCCCceeE-CcccchhhhHHHHHHHHHHHHHHHH-hcCCcCCCCCCCCCCCCc
Confidence 3888997665432 33455666 22222221 1355689988777555444432211 1132211
Q ss_pred -------C----CCCceEEEEeeccchhhhheeeee
Q 047978 290 -------G----EELEWGVLLGFEAGLTVEAIVLRS 314 (320)
Q Consensus 290 -------G----~~~d~vll~~~G~G~~~~a~~l~~ 314 (320)
+ ...++++.-+||.|.+..+++|+.
T Consensus 386 ~~~~~~~~~~~~~~~~~al~~s~gfGG~n~~~il~~ 421 (424)
T PRK06333 386 EGLDVVANKARPMDMDYALSNGFGFGGVNASILFRR 421 (424)
T ss_pred cccccccCCCcccCcCEEEEeeecCCCeeEEEEEec
Confidence 0 001567888999888888888764
No 91
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=98.78 E-value=2.3e-07 Score=90.58 Aligned_cols=248 Identities=17% Similarity=0.123 Sum_probs=147.6
Q ss_pred chHHHHHHHHHHHHHHcCCC--CCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcch---hh----h---hhh-----hhc
Q 047978 55 KVPKLGKEAVSKAIKEWGQP--ISKITHLISCSVSGVDMPGADYQLTKLLGLKPSV---KR----V---MLT-----AES 117 (320)
Q Consensus 55 ~~~~la~~Aa~~aL~~ag~~--~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~~---c~----~---~l~-----l~~ 117 (320)
+..+|+.+|+++||+++|++ ++|||.+++++............++++||+.+.. |. + .+. +++
T Consensus 26 s~~~L~~eA~~~Al~DAGl~~~~~dID~v~v~~~~~~~~~~~~~~la~~lGl~p~~~~~~~~GG~s~~~~v~~Aa~~Ias 105 (498)
T PRK08257 26 EPVDLMAAAARAAAADAGADAVLEAIDSVAVVNQLSWRYRDPPGLLAERLGADPARTVYSPVGGNSPQRLVNEAALRIAA 105 (498)
T ss_pred CHHHHHHHHHHHHHHhcCCCcCHHHCCEEEEeccccccccCHHHHHHHHcCCCCcceeEecCCCHHHHHHHHHHHHHHHC
Confidence 78999999999999999999 9999999887653322223457899999997643 21 1 122 789
Q ss_pred CCCCeEEEEEeeccccc--cc---------C----------------------CC--CC---------------------
Q 047978 118 NAGARVLVVCSEITVGT--FR---------A----------------------PS--DE--------------------- 141 (320)
Q Consensus 118 ~~~~~~LVv~~e~~s~~--~~---------~----------------------~~--~~--------------------- 141 (320)
|..+.|||+++|+.+.. +. . +. ..
T Consensus 106 G~advVLv~G~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~~~p~~~yal~a~ay~~~~G~t~e 185 (498)
T PRK08257 106 GEADVALVAGAEAQSTATKLRKAGEKLDWTPQDEGPLADRGGDPRPMASPAELRHGLDRPVYVYPLFENALRAALGRSPE 185 (498)
T ss_pred CCCCEEEEeeeeeccccchhccccccccccccccccccccccccccccchhhhhcCCCCcchHHHHHHHHHHHHhCcCHH
Confidence 99999999999985421 00 0 00 00
Q ss_pred -----------------------------Cchhhh----------------hhh-hhccCceEEEEeecCCC-CCC---C
Q 047978 142 -----------------------------NLSCLV----------------NRA-IVGDGTAALIVGACPDI-NTE---R 171 (320)
Q Consensus 142 -----------------------------~~~~~~----------------~~~-~~GDgAaA~ll~~~~~~-~~~---~ 171 (320)
+.++.. -++ ...|||+|+||.+++.. ... .
T Consensus 186 ~~~a~~a~l~~~~~~~Aa~NP~A~~r~~~t~eevl~~~~~~rmIa~Pl~~ldca~~~~DGaaAvil~S~e~A~~l~~~~~ 265 (498)
T PRK08257 186 EHRAEMGELWAPFSAVAAKNPHAWIPRERSAEEIVTPTPDNRMIAWPYTKLMNANDMVDQGAAVLLTSVAKARRLGVPED 265 (498)
T ss_pred HHHHHHHHHHHHHHHHHhhCHHHhhCCCCCHHHHhcccCCCCeeeCCccHhhcCCCCcccceEEEEeeHHHHHhcCCCCC
Confidence 000000 011 25677777777665431 110 1
Q ss_pred CeeEEeccCceecCCCcccccccccccceechhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHHHHHHcCCCcc-
Q 047978 172 PLFHIVPTAQTILPDSEDAIKGHFRESPLIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKT- 250 (320)
Q Consensus 172 ~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e- 250 (320)
....+...+....+.. +.-+.+-........+.+.+++++|++++|++ .+=+|-..........+.||+.++
T Consensus 266 ~~V~i~g~a~~~~~~~-----~~~r~~~~~~~~~~~aa~~a~~~AGi~~~Did--~~elydcF~~~~~~~~E~LGl~~~g 338 (498)
T PRK08257 266 RWVYLHGGADAHDPYD-----ILERPDLHRSPAIRAAGRRALALAGLGIDDID--AFDLYSCFPSAVQVAARELGLDLDD 338 (498)
T ss_pred ceEEEEEEEEeeCccc-----cccccccccChHHHHHHHHHHHHhCCCHHHCC--EEEeccCCHHHHHHHHHHcCcCCCC
Confidence 1122222211111100 00000001123334688999999999999973 778888887777788899998866
Q ss_pred hhhhh-HHHHhccCCcccchHHHHHHHHHHhchhcCCCCCCCCCceEEEEeeccchh-hhheeeeecc
Q 047978 251 KLRET-RHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLT-VEAIVLRSIP 316 (320)
Q Consensus 251 ~~~~~-~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~-~~a~~l~~~~ 316 (320)
+...| ---+.-+||.+.++-+..+.++.++.. | +++ ++.|..+.|.-++ ..+.+|...|
T Consensus 339 ~~pvN~sGGl~s~G~P~~a~g~~~i~E~v~QLR--g--~~~---~~gLv~~~GG~~~~~~~~vl~~~p 399 (498)
T PRK08257 339 PRPLTVTGGLPFFGGPGNNYVTHAIAEMVERLR--A--NPG---RRGLVTANGGYLTKHSVGVYSTEP 399 (498)
T ss_pred CCCcCCCcChhhcCCchhhHHHHHHHHHHHHHh--h--cCC---CEEEEECCCChhhceEEEEEeCCC
Confidence 22222 011344799999988888888887633 1 244 6777777775333 3344555444
No 92
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=98.78 E-value=2.3e-07 Score=88.31 Aligned_cols=81 Identities=16% Similarity=0.117 Sum_probs=64.9
Q ss_pred ccchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCC--CCCCCHHHHHHHHcCCCcc--------hhhhhhh--------
Q 047978 53 VPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSG--VDMPGADYQLTKLLGLKPS--------VKRVMLT-------- 114 (320)
Q Consensus 53 ~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~--~~~p~~a~~l~~~LGl~~~--------~c~~~l~-------- 114 (320)
+.++.+|+.+|.+++|+++|++++|||.+|+++..+ ...+..+..+...+|++.. .|++-+.
T Consensus 23 ~~~~~eL~~~a~~~al~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Glp~~~p~~tV~~~CaSG~~Ai~~A~~~ 102 (401)
T PRK08131 23 SVRPDDLAATVIRRLLEKSGFPGDDIEDVILGCTNQAGEDSRNVARNALLLAGLPVTVPGQTVNRLCASGLAAVIDAARA 102 (401)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHhcCCCCCCceeeeechhhhHHHHHHHHHHH
Confidence 677899999999999999999999999999998755 2235566678889999842 2654221
Q ss_pred hhcCCCCeEEEEEeecccc
Q 047978 115 AESNAGARVLVVCSEITVG 133 (320)
Q Consensus 115 l~~~~~~~~LVv~~e~~s~ 133 (320)
+++|..+.+|+++.|..|.
T Consensus 103 I~sG~~dvvlagG~Esms~ 121 (401)
T PRK08131 103 ITCGEGDLYLAGGVESMSR 121 (401)
T ss_pred HHCCCCCEEEEEEecCCCC
Confidence 7889999999999998874
No 93
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=98.78 E-value=4.5e-07 Score=87.13 Aligned_cols=228 Identities=16% Similarity=0.093 Sum_probs=134.7
Q ss_pred ccchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCC-CCCCCHH-HHHHHHcCCCcch-------hhhh---hh-----h
Q 047978 53 VPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSG-VDMPGAD-YQLTKLLGLKPSV-------KRVM---LT-----A 115 (320)
Q Consensus 53 ~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~-~~~p~~a-~~l~~~LGl~~~~-------c~~~---l~-----l 115 (320)
+.+..+|+.+|+++||+++|++++|||.++.++... +..+..+ ..++..||+++.. |++- +. +
T Consensus 34 ~~~~~eL~~eA~~~Al~dagl~~~dID~vv~~~~~~~~~g~~~~~~~~~~~lGl~~~~~~~v~~~~aSg~~ai~~A~~~I 113 (430)
T PRK06365 34 YMDFRERVKKAFDYAMNDAGLTLADIDGSVASYFSDHFQRQLLAGIMVQDYLGLVPKPSKRIEGGGATGGLAFQAGYEEI 113 (430)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEecccccccccchhhHHHHHhcCCCCCceEEEeCCcHHHHHHHHHHHHHH
Confidence 456689999999999999999999999987665443 2222222 4468999997632 4321 11 7
Q ss_pred hcCCCCeEEEEEeecccccc----------------cCCCCC-C------------------------------------
Q 047978 116 ESNAGARVLVVCSEITVGTF----------------RAPSDE-N------------------------------------ 142 (320)
Q Consensus 116 ~~~~~~~~LVv~~e~~s~~~----------------~~~~~~-~------------------------------------ 142 (320)
++|..+.|||++.|+.+..- ..|... .
T Consensus 114 ~sG~~~~vLv~G~e~~s~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~al~a~ry~~~yG~t~e~la~vav~~~~~A~~N 193 (430)
T PRK06365 114 ASGRMDCVAVYGFETMSHVNTWKGNEFIALASDTNFDYPLGGFYTGYYAMMAVRHMYEFGTTVEQLAKVSVKNHGNAIHN 193 (430)
T ss_pred HcCCCCEEEEEEeeecccccchhhhhhhcccccccccccccCccHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhhC
Confidence 89999999999999764310 001000 0
Q ss_pred ----------chhh------------hhhhhhccCceEEEEeecCCC-CC-CCCee-EEeccCce-ecCCCccc------
Q 047978 143 ----------LSCL------------VNRAIVGDGTAALIVGACPDI-NT-ERPLF-HIVPTAQT-ILPDSEDA------ 190 (320)
Q Consensus 143 ----------~~~~------------~~~~~~GDgAaA~ll~~~~~~-~~-~~~~~-~~~~~~~~-~~p~~~~~------ 190 (320)
.++. ..++.++|||+|+||.+++.. .. .++.. .....+.. ..|.....
T Consensus 194 P~A~~~~~~t~e~v~~s~~i~~Plt~~d~~~~sDGAaAvvl~See~A~~l~~~pv~i~g~g~~~~~~~~~~~~~~~~~~~ 273 (430)
T PRK06365 194 PFAQSPMKITVEDVRKSPMVSYPLTRLDVCAMSDGAACAILASEDKAFEITDKPVLIKAIGTGSDTLRLADRPFGEVPLL 273 (430)
T ss_pred cHhhcCCCCCHHHHhcCCccccCcchhhcCCcCCceEEEEEecHHHHHhcCCCCeEEEEEEEeccccccccccccccccc
Confidence 0111 122345799999999987532 11 12221 12221111 01110000
Q ss_pred -----c-cccccccc-eechhHHHHHHHHhhhcCCC--CCCCCceEEEEcCCChhHHHHHHHHcCCCcc-----------
Q 047978 191 -----I-KGHFRESP-LIADNIDKFLAESFDQVSLN--DHDWNSLFWMMHPIGPAVLDQIEGKLGLEKT----------- 250 (320)
Q Consensus 191 -----~-~~~~~~~g-~~~~~~~~~i~~~l~~~g~~--~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e----------- 250 (320)
. ...+...+ ........+.+.+++++|++ ++|+| .+=+|-......-...+.||+.+.
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~AGl~~~~~DiD--~~Ei~D~Fa~~~l~~lE~lGl~~~Ge~~~~~~~G~ 351 (430)
T PRK06365 274 PNESPDDYKDLRYPGVHSFRAGRMAAKEAYEMAGITDPLNDLD--LIELHDAYTSSEIQTYEDLGLCKYGEGGQFIESGK 351 (430)
T ss_pred cccccccccccccccccccHHHHHHHHHHHHHcCCCCCHHHCC--EEEeecCCcHHHHHHHHHcCCCCCCchHHHHHCCC
Confidence 0 00111112 12234457889999999997 79873 777777766666677899998752
Q ss_pred -----hhhhh-HHHHhccCCcccchHHHHHHHHHHhch
Q 047978 251 -----KLRET-RHVLSEYGNMASATVLFVLDEMRKRSV 282 (320)
Q Consensus 251 -----~~~~~-~~~~~~~Gn~~sasi~~~L~~~~~~~~ 282 (320)
+++.| .-=.--+||...|+=+..+.+++.+..
T Consensus 352 ~~~~G~~piNt~GG~la~Ghp~GatG~~~~~e~~~QLr 389 (430)
T PRK06365 352 PELPGKLPVNPSGGLLAAGHAVGATGIMQAVFMFWQLQ 389 (430)
T ss_pred cCCCCCccccCCCchhcCCCcccHHHHHHHHHHHHHHh
Confidence 22221 001223799998888888888877544
No 94
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=98.77 E-value=1.7e-07 Score=89.09 Aligned_cols=81 Identities=11% Similarity=0.024 Sum_probs=65.2
Q ss_pred ccchHHHHHHHHHHHHHH-cCCCCCCcCEEEEEeeCC--CCCCCHHHHHHHHcCCCcc--------hhhh-hhh------
Q 047978 53 VPKVPKLGKEAVSKAIKE-WGQPISKITHLISCSVSG--VDMPGADYQLTKLLGLKPS--------VKRV-MLT------ 114 (320)
Q Consensus 53 ~e~~~~la~~Aa~~aL~~-ag~~~~dId~li~~s~t~--~~~p~~a~~l~~~LGl~~~--------~c~~-~l~------ 114 (320)
+.++.+|+..|++++|++ ++++|++||.+|+++... ...+..+..+...+|++.. .|++ +..
T Consensus 22 ~~~~~~L~~~a~~~al~~~a~i~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~~p~~~V~~~CaSG~~Ai~~a~~ 101 (400)
T TIGR02430 22 SVRADDLAAVPIKALLARNPQLDWAAIDDVIYGCANQAGEDNRNVARMAALLAGLPVSVPGTTVNRLCGSGLDAIGMAAR 101 (400)
T ss_pred CCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCceEEeechhhhHHHHHHHHHH
Confidence 667899999999999996 699999999999998764 3235677789999999852 2643 211
Q ss_pred -hhcCCCCeEEEEEeecccc
Q 047978 115 -AESNAGARVLVVCSEITVG 133 (320)
Q Consensus 115 -l~~~~~~~~LVv~~e~~s~ 133 (320)
+++|..+.+|+++.|..|.
T Consensus 102 ~I~sG~~d~~la~G~E~ms~ 121 (400)
T TIGR02430 102 AIKAGEADLLIAGGVESMSR 121 (400)
T ss_pred HHHCCCCCEEEEeccccccC
Confidence 7889999999999999874
No 95
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=98.77 E-value=1.9e-07 Score=88.87 Aligned_cols=81 Identities=11% Similarity=0.049 Sum_probs=64.9
Q ss_pred ccchHHHHHHHHHHHHHH-cCCCCCCcCEEEEEeeCC-CC-CCCHHHHHHHHcCCCcc--------hhhhhhh-------
Q 047978 53 VPKVPKLGKEAVSKAIKE-WGQPISKITHLISCSVSG-VD-MPGADYQLTKLLGLKPS--------VKRVMLT------- 114 (320)
Q Consensus 53 ~e~~~~la~~Aa~~aL~~-ag~~~~dId~li~~s~t~-~~-~p~~a~~l~~~LGl~~~--------~c~~~l~------- 114 (320)
+.++.+|+..|++++|++ +|++|++||.+|+++..+ .. .+..+..+...+|++.. .|++-+.
T Consensus 23 ~~~~~~L~~~a~~~al~~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~vP~~tV~~aCaSG~~Ai~~A~~ 102 (401)
T PRK09050 23 SVRADDLGAVPLKALMARNPGVDWEAVDDVIYGCANQAGEDNRNVARMSALLAGLPVSVPGTTINRLCGSGMDAVGTAAR 102 (401)
T ss_pred CCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccchHHHHHHHHcCCCCCCceEEEecccccHHHHHHHHHH
Confidence 667899999999999996 699999999999998765 22 35567779999999652 2643211
Q ss_pred -hhcCCCCeEEEEEeecccc
Q 047978 115 -AESNAGARVLVVCSEITVG 133 (320)
Q Consensus 115 -l~~~~~~~~LVv~~e~~s~ 133 (320)
+++|..+.+|+++.|..|.
T Consensus 103 ~I~sG~~dvvlagGvEsmS~ 122 (401)
T PRK09050 103 AIKAGEAELMIAGGVESMSR 122 (401)
T ss_pred HHHCCCCCEEEEeccccccc
Confidence 7889999999999998874
No 96
>PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways. The FAS I pathway, which generally only produces palmitate, is found in eukaryotes and is performed either by a single polypeptide which contains all the reaction centres needed to form a fatty acid, or by two polypeptides which interact to form a multifunctional complex. The FAS II pathway, which is capable of producing many different fatty acids, is found in mitochondria, bacteria, plants and parasites, and is performed by many distinct proteins, each of which catalyses a single step within the pathway. The large diversity of products generated by this pathway is possible because the acyl carrier protein (ACP) intermediates are diffusible entities that can be diverted into other biosynthetic pathways []. 3-Oxoacyl-[acyl carrier protein (ACP)] synthase III catalyses the first condensation step within the FAS II pathway, using acetyl-CoA as the primer and malonyl-ACP as the acceptor, as shown below. Acyl-[ACP] + malonyl-[ACP] = 3-oxoacyl-[ACP] + CO(2) + [ACP] The oxoacyl-ACP formed by this reaction subsequently enters the elongation cycle, where the acyl chain is progressively lengthened by the combined activities of several enzymes. The enzymes studied so far are homodimers, where each monomer consists of two domains (N-terminal and C-terminal) which are similar in structure, but not in sequence [, ]. This entry represents a conserved region within the N-terminal domain.; GO: 0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity, 0006633 fatty acid biosynthetic process; PDB: 1ZOW_C 1UB7_B 3IL7_A 3IL3_A 2X3E_B 4DFE_C 3LED_B 3ROW_B 3S23_A 3S1Z_A ....
Probab=98.75 E-value=8.5e-09 Score=75.40 Aligned_cols=53 Identities=23% Similarity=0.227 Sum_probs=41.5
Q ss_pred hhhhhhh--------hhcCCCCeEEEEEeecccccccCCCCCCchhhhhhhhhccCceEEEEeecCC
Q 047978 108 VKRVMLT--------AESNAGARVLVVCSEITVGTFRAPSDENLSCLVNRAIVGDGTAALIVGACPD 166 (320)
Q Consensus 108 ~c~~~l~--------l~~~~~~~~LVv~~e~~s~~~~~~~~~~~~~~~~~~~~GDgAaA~ll~~~~~ 166 (320)
.|+++++ ++++..++||||++|+.+. +.++.+ +.+..+|||||+|+||++++.
T Consensus 6 ~C~g~~~al~~A~~~i~~g~~~~~Lvv~~d~~s~-~~~~~~-----~~~~~~~gDgAaA~vl~~~~~ 66 (80)
T PF08545_consen 6 ACAGFLYALDVAAALIASGRAKNALVVGGDRLSR-IVDRTD-----RQTAFIFGDGAAAVVLSRDEE 66 (80)
T ss_dssp GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEEGGG-GSHTTH-----HHHHTTB-EEEEEEEEEEESS
T ss_pred cchHHHHHHHHHHHHHhhccCCEEEEEeeccccc-cccccc-----cCcceeecchheEEEEEecCC
Confidence 5888765 6788999999999999997 655532 456789999999999999854
No 97
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=98.72 E-value=4.2e-07 Score=87.26 Aligned_cols=249 Identities=12% Similarity=0.079 Sum_probs=143.7
Q ss_pred chHHHHHHHHHHHHHHcCCC-CCCcCE----EEEEeeCC-CC---------------------C----C-CHHHHHHHHc
Q 047978 55 KVPKLGKEAVSKAIKEWGQP-ISKITH----LISCSVSG-VD---------------------M----P-GADYQLTKLL 102 (320)
Q Consensus 55 ~~~~la~~Aa~~aL~~ag~~-~~dId~----li~~s~t~-~~---------------------~----p-~~a~~l~~~L 102 (320)
....|+..|+++||+++|++ +++++. +++++... .. . + ..+.+|...+
T Consensus 76 ~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~ 155 (421)
T PTZ00050 76 RATHFAMAAAREALADAKLDILSEKDQERIGVNIGSGIGSLADLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVAIKH 155 (421)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccccCcccEEEEEccCcccHHHHHHHHHHHHhcCcCcCCHHHHHhhhhhHHHHHHHHHh
Confidence 45789999999999999998 666653 33433322 10 0 1 2456778888
Q ss_pred CCCcc------hhhhhhh--------hhcCCCCeEEEEEeecccccc---------------c-CCCCC--Cchhhhhhh
Q 047978 103 GLKPS------VKRVMLT--------AESNAGARVLVVCSEITVGTF---------------R-APSDE--NLSCLVNRA 150 (320)
Q Consensus 103 Gl~~~------~c~~~l~--------l~~~~~~~~LVv~~e~~s~~~---------------~-~~~~~--~~~~~~~~~ 150 (320)
|++.. .|++.+. |++|..+.+||.+.|.....+ . +|... ..+....++
T Consensus 156 ~l~Gp~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~lvgG~e~~~~p~~~~~f~~~~~l~~~~~~~p~~~~~pfd~~~~G~ 235 (421)
T PTZ00050 156 KLKGPSGSAVTACATGAHCIGEAFRWIKYGEADIMICGGTEASITPVSFAGFSRMRALCTKYNDDPQRASRPFDKDRAGF 235 (421)
T ss_pred CCCCcccccccHhHHHHHHHHHHHHHHHcCCCCEEEECcccccCCHHHHHHHHhhhccccCcCCCCCccCCCCcCCCCCE
Confidence 88753 3654332 788999999999998632110 0 01100 001112467
Q ss_pred hhccCceEEEEeecCCCC-C-CCCeeEEeccCceecCCCcccccccccccceechhHHHHHHHHhhh-cCCCCCCCCceE
Q 047978 151 IVGDGTAALIVGACPDIN-T-ERPLFHIVPTAQTILPDSEDAIKGHFRESPLIADNIDKFLAESFDQ-VSLNDHDWNSLF 227 (320)
Q Consensus 151 ~~GDgAaA~ll~~~~~~~-~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~i~~~l~~-~g~~~~d~~~~~ 227 (320)
++||||+++||++.+... . ...+-++...+... +... + ...... .....++++.+|++ +|++++|+ ++
T Consensus 236 ~~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~--d~~~-~-~~p~~~---~~~~~~ai~~Al~~~Agi~~~dI--d~ 306 (421)
T PTZ00050 236 VMGEGAGILVLEELEHALRRGAKIYAEIRGYGSSS--DAHH-I-TAPHPD---GRGARRCMENALKDGANININDV--DY 306 (421)
T ss_pred eeccceEEEEEeeHHHHHHCCCeEEEEEEEEEEcC--CCCC-C-CCCCCC---hHHHHHHHHHHHHhccCCChhhC--CE
Confidence 899999999999865421 0 11112333321110 0000 0 001111 24456789999999 99999997 38
Q ss_pred EEEcCCChhHH-----HHHHHHcCCCc-chhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCC---------C--
Q 047978 228 WMMHPIGPAVL-----DQIEGKLGLEK-TKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATT---------G-- 290 (320)
Q Consensus 228 ~i~h~~~~~~~-----~~~~~~lg~~~-e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~---------G-- 290 (320)
+-+|-.+...- +.+.+.++-.. +.++.+ .+-..+||+.+|+=.+.|...+.. ++++.+.| .
T Consensus 307 ie~hgtgt~~~D~~E~~al~~~~~~~~~~~~~v~-s~K~~~GH~~~AaG~~~l~~~~l~-l~~~~ipp~~~~~~~~~~~~ 384 (421)
T PTZ00050 307 VNAHATSTPIGDKIELKAIKKVFGDSGAPKLYVS-STKGGLGHLLGAAGAVESIVTILS-LYEQIIPPTINLENPDAECD 384 (421)
T ss_pred EECCCccCCCCCHHHHHHHHHHhccccCCCceEE-CccccccccHHHHHHHHHHHHHHH-HHcCccCCCCCCCCCCCCCC
Confidence 88997765443 23444555221 222221 134468999988877777665422 11144321 0
Q ss_pred ------------CCCceEEEEeeccchhhhheeeee
Q 047978 291 ------------EELEWGVLLGFEAGLTVEAIVLRS 314 (320)
Q Consensus 291 ------------~~~d~vll~~~G~G~~~~a~~l~~ 314 (320)
...+++|.-+||-|.+-.+++++.
T Consensus 385 l~~~~~~~~~~~~~~~~~l~nsfgfgG~n~~lvl~~ 420 (421)
T PTZ00050 385 LNLVQGKTAHPLQSIDAVLSTSFGFGGVNTALLFTK 420 (421)
T ss_pred ccccCCcccCcCCCCCEEEEeeecCCCeeEEEEEeC
Confidence 011568888999999988898874
No 98
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=98.72 E-value=6.6e-07 Score=84.94 Aligned_cols=80 Identities=18% Similarity=0.022 Sum_probs=62.1
Q ss_pred ccchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCC-CCCCCHHHHHHHHcCCCcc--------hhhhhhh--------h
Q 047978 53 VPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSG-VDMPGADYQLTKLLGLKPS--------VKRVMLT--------A 115 (320)
Q Consensus 53 ~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~-~~~p~~a~~l~~~LGl~~~--------~c~~~l~--------l 115 (320)
+.+..+|+.+|++++|+++|++++|||.+|+++..+ ...+..+..++..+|++.. .|++-+. +
T Consensus 23 ~~~~~~L~~~a~~~al~dagi~~~dID~vi~g~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~v~~~caSg~~av~~Aa~~I 102 (388)
T PRK06366 23 KIKAPQLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGVGQNPAGQAAYHAGLPFGVTKYTVNVVCASGMLAVESAAREI 102 (388)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCccCcHHHHHHHHCCCCCCCcceeeechhhHHHHHHHHHHHHH
Confidence 467899999999999999999999999999887654 2223446778899999741 2543221 7
Q ss_pred hcCCCCeEEEEEeeccc
Q 047978 116 ESNAGARVLVVCSEITV 132 (320)
Q Consensus 116 ~~~~~~~~LVv~~e~~s 132 (320)
++|..+.+|+.+.|..+
T Consensus 103 ~sG~~d~vla~G~e~ms 119 (388)
T PRK06366 103 MLGERDLVIAGGMENMS 119 (388)
T ss_pred hcCCCCEEEEEeeEccc
Confidence 88999999988878765
No 99
>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.72 E-value=4.2e-07 Score=86.88 Aligned_cols=236 Identities=15% Similarity=0.153 Sum_probs=140.3
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCcCE----EEEEeeCC----------------------C----CCC-CHHHHHHHHcCC
Q 047978 56 VPKLGKEAVSKAIKEWGQPISKITH----LISCSVSG----------------------V----DMP-GADYQLTKLLGL 104 (320)
Q Consensus 56 ~~~la~~Aa~~aL~~ag~~~~dId~----li~~s~t~----------------------~----~~p-~~a~~l~~~LGl 104 (320)
...|+..|+++||+++|+++++++. +++++... + ..| ..+.+|+..+|+
T Consensus 72 ~~~l~~~Aa~~AL~dAGl~~~~~~~~r~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 151 (406)
T PRK08439 72 FIQLGLKAAREAMKDAGFLPEELDAERFGVSSASGIGGLPNIEKNSIICFEKGPRKISPFFIPSALVNMLGGFISIEHGL 151 (406)
T ss_pred HHHHHHHHHHHHHHHcCCCcccCCCCCEEEEEecCCccHHHHHHHHHHHHhcCccccCchhcccccccHHHHHHHHHhCC
Confidence 4679999999999999999877763 44444211 0 112 467789999999
Q ss_pred Ccc------hhhhhhh--------hhcCCCCeEEEEEeecc-ccc----------c----------cCCCCCCchhhhhh
Q 047978 105 KPS------VKRVMLT--------AESNAGARVLVVCSEIT-VGT----------F----------RAPSDENLSCLVNR 149 (320)
Q Consensus 105 ~~~------~c~~~l~--------l~~~~~~~~LVv~~e~~-s~~----------~----------~~~~~~~~~~~~~~ 149 (320)
+.. .|++.++ +++|..+.+||+++|.. ++. + ..|-|. ...+
T Consensus 152 ~Gp~~~~~~acas~~~Al~~A~~~i~~G~~d~~lv~g~d~~l~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~----~~~G 227 (406)
T PRK08439 152 KGPNLSSVTACAAGTHAIIEAVKTIMLGGADKMLVVGAESAICPVGIGGFAAMKALSTRNDDPKKASRPFDK----DRDG 227 (406)
T ss_pred CCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEecchhccCHHHHHHHHHhCccccCCCCCccCcCCccC----CCCc
Confidence 864 3665433 78999999999999963 110 0 012121 2247
Q ss_pred hhhccCceEEEEeecCCC--CCCCCeeEEeccCceecCCCcccccccccccceechhHHHHHHHHhhhcCCCCCCCCceE
Q 047978 150 AIVGDGTAALIVGACPDI--NTERPLFHIVPTAQTILPDSEDAIKGHFRESPLIADNIDKFLAESFDQVSLNDHDWNSLF 227 (320)
Q Consensus 150 ~~~GDgAaA~ll~~~~~~--~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~i~~~l~~~g~~~~d~~~~~ 227 (320)
+++|+||+++||++.+.. .-.+.+-++...+.. -+.. .+... ..+...++++++|+.+|+ +|+ ++
T Consensus 228 ~v~gEGa~~lvLe~~~~A~~rg~~i~a~i~g~~~~--~d~~-----~~~~p--~~~~~~~a~~~al~~ag~--~~i--~~ 294 (406)
T PRK08439 228 FVMGEGAGALVLEEYESAKKRGAKIYAEIIGFGES--GDAN-----HITSP--APEGPLRAMKAALEMAGN--PKI--DY 294 (406)
T ss_pred EEeeCceEEEEEccHHHHHHCCCeEEEEEEeEEcc--CCCC-----CCCCC--CHHHHHHHHHHHHHHcCC--Ccc--CE
Confidence 889999999999976542 101112223222111 0100 11110 024556788999999988 564 38
Q ss_pred EEEcCCChhHHHH-----HHHHcCCCcchh-hhhHHHHhccCCcccchHHHHHHHH---HHhchhcCCCCC---------
Q 047978 228 WMMHPIGPAVLDQ-----IEGKLGLEKTKL-RETRHVLSEYGNMASATVLFVLDEM---RKRSVEEGKATT--------- 289 (320)
Q Consensus 228 ~i~h~~~~~~~~~-----~~~~lg~~~e~~-~~~~~~~~~~Gn~~sasi~~~L~~~---~~~~~~~g~l~~--------- 289 (320)
+-.|-.+.+..|. +.+.++-..... ..+ +-..+||+.+|+=.+.+.-. +++ |.+.|
T Consensus 295 v~~hgtgt~~~D~~E~~al~~~f~~~~~~~~v~s--~K~~~Gh~~~AsG~~~~~~~~~~l~~----~~ipp~~~~~~~~~ 368 (406)
T PRK08439 295 INAHGTSTPYNDKNETAALKELFGSKEKVPPVSS--TKGQIGHCLGAAGAIEAVISIMAMRD----GILPPTINQETPDP 368 (406)
T ss_pred EEccCCcCCCCCHHHHHHHHHHhcccCCCCeEEC--cccccccCchhhhHHHHHHHHHHHhC----CeeCCCCCCCCCCC
Confidence 8888866544333 345555322222 222 34458999988866655433 333 33221
Q ss_pred --------C----CCCceEEEEeeccchhhhheeeee
Q 047978 290 --------G----EELEWGVLLGFEAGLTVEAIVLRS 314 (320)
Q Consensus 290 --------G----~~~d~vll~~~G~G~~~~a~~l~~ 314 (320)
. ...+++|.-+||-|.+-++++++.
T Consensus 369 ~~~~~~~~~~~~~~~~~~~l~nsfgfGG~n~~lvl~~ 405 (406)
T PRK08439 369 ECDLDYIPNVARKAELNVVMSNSFGFGGTNGVVIFKK 405 (406)
T ss_pred CCCcccCCCccccCCCCEEEEeeecCCCceEEEEEec
Confidence 0 011567888999998888888874
No 100
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=98.70 E-value=7.5e-07 Score=85.58 Aligned_cols=82 Identities=11% Similarity=0.009 Sum_probs=64.5
Q ss_pred cccchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCC-CCCCCHHHHHHHHcCCCc-c-------hhhhhhh--------
Q 047978 52 LVPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSG-VDMPGADYQLTKLLGLKP-S-------VKRVMLT-------- 114 (320)
Q Consensus 52 ~~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~-~~~p~~a~~l~~~LGl~~-~-------~c~~~l~-------- 114 (320)
.+.+..+|+.+|++++|+++|++|++||.+|++++.+ ...+..+..+...+|++. . .|++-+.
T Consensus 25 ~~~~~~eL~~~a~~~al~~agl~~~~ID~vi~G~~~~~~~~~~~ar~~a~~aGl~~~~P~~tV~~aCaSG~~Ai~~Aa~~ 104 (428)
T PRK08963 25 HGIPAVDLGKMVVGELLARSEIDPELIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVSRACATSFQAVANVAES 104 (428)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCccHHHHHHHHHCCCCCCCcceeehhhhHHHHHHHHHHHHH
Confidence 3678899999999999999999999999999998765 222445667888999974 2 2654221
Q ss_pred hhcCCCCeEEEEEeecccc
Q 047978 115 AESNAGARVLVVCSEITVG 133 (320)
Q Consensus 115 l~~~~~~~~LVv~~e~~s~ 133 (320)
+++|..+.+|+++.|..|.
T Consensus 105 I~sG~~dvvLvgG~Esms~ 123 (428)
T PRK08963 105 IMAGTIDIGIAGGADSSSV 123 (428)
T ss_pred HHCCCCCEEEEecccccCC
Confidence 7889999999999998764
No 101
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=98.68 E-value=1.7e-06 Score=82.44 Aligned_cols=226 Identities=16% Similarity=0.049 Sum_probs=134.3
Q ss_pred cccchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCC-CCCCCHHHHHHHHcCCCcch-------hhhh---hh-----h
Q 047978 52 LVPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSG-VDMPGADYQLTKLLGLKPSV-------KRVM---LT-----A 115 (320)
Q Consensus 52 ~~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~-~~~p~~a~~l~~~LGl~~~~-------c~~~---l~-----l 115 (320)
.+.+..+|+.+|++++|+++|++++|||.+++++... +........+.+.+|+++.. |++- ++ +
T Consensus 23 ~~~~~~~L~~ea~~~AL~dagl~~~dID~v~vg~~~~~~~~~~~~~~~a~~lGl~~~~~~~v~~~c~sg~~ai~~A~~~I 102 (398)
T PRK06157 23 WDAGAEDLMVEAFLEALADAGIEPKDIDAAWFGTHYDEIGSGKSGTPLSRALRLPNIPVTRVENFCATGSEAFRGAVYAV 102 (398)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchhHHHHHHcCCCCCCEEEEecccHHHHHHHHHHHHHH
Confidence 3567899999999999999999999999999877544 21222346788899997532 4431 21 7
Q ss_pred hcCCCCeEEEEEeeccccc-c---c---------CC-C--CCC--------------------c----------------
Q 047978 116 ESNAGARVLVVCSEITVGT-F---R---------AP-S--DEN--------------------L---------------- 143 (320)
Q Consensus 116 ~~~~~~~~LVv~~e~~s~~-~---~---------~~-~--~~~--------------------~---------------- 143 (320)
++|..+.+||++.|+.+.. + . .+ . ... +
T Consensus 103 ~sG~~d~vlv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a~~~~~~yG~t~e~~~~~~a~vav~~~~~A~ 182 (398)
T PRK06157 103 ASGAYDIALALGVEKLKDTGYGGLPVANPGTLADMTMPNVTAPGNFAQLASAYAAKYGVSREDLKRAMAHVSVKSHANGA 182 (398)
T ss_pred HCCCCCEEEEEEEeecccCccccccccccccchhcccccCchHHHHHHHHHHHHHHhCCCHHHHcccccHHHHHHHHHHh
Confidence 8999999999999986430 0 0 00 0 000 0
Q ss_pred -------------hh------------hhhhhhhccCceEEEEeecCCC-CCCC-CeeEEeccCceecCCCccccccccc
Q 047978 144 -------------SC------------LVNRAIVGDGTAALIVGACPDI-NTER-PLFHIVPTAQTILPDSEDAIKGHFR 196 (320)
Q Consensus 144 -------------~~------------~~~~~~~GDgAaA~ll~~~~~~-~~~~-~~~~~~~~~~~~~p~~~~~~~~~~~ 196 (320)
++ +...+..+|||+|+||.+++.. .... +...+.+.+......... ......
T Consensus 183 ~np~A~~r~~~t~e~v~~s~~v~~Pl~~~d~~~~~DGAaA~vl~s~~~A~~l~~~~~v~I~g~~~~~~~~~~~-~~~~~~ 261 (398)
T PRK06157 183 RNPKAHLRKAVTEEQVLKAPMIAGPLGLFDCCGVSDGAAAAIVTTPEIARALGKKDPVYVKALQLAVSNGWEL-QYNGWD 261 (398)
T ss_pred cCChhhcCCCCCHHHHhcCCcccCCCchhccCCCCCccEEEEEecHHHHHhhCCCCCeEEEEEEEeccccccc-cccccc
Confidence 00 1122345799999999876432 1111 223333322110000000 000000
Q ss_pred ccceechhHHHHHHHHhhhcCCC--CCCCCceEEEEcCCChhHHHHHHHHcCCCcc----------------hhhhhH-H
Q 047978 197 ESPLIADNIDKFLAESFDQVSLN--DHDWNSLFWMMHPIGPAVLDQIEGKLGLEKT----------------KLRETR-H 257 (320)
Q Consensus 197 ~~g~~~~~~~~~i~~~l~~~g~~--~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e----------------~~~~~~-~ 257 (320)
. ..........+.+++++|++ ++|+| .+=+|-......-...+.||+.+. +++.|- -
T Consensus 262 ~--~~~~~~~~aa~~a~~~AGl~~~~~Did--~~Ei~D~Fs~~~l~~~e~lGl~~~Ge~~~~~~~g~~~~~G~~pvN~~G 337 (398)
T PRK06157 262 G--SYFPTTRIAARKAYREAGITDPREELS--MAEVHDCFSITELVTMEDLGLSERGQAWRDVLDGFFDADGGLPCQIDG 337 (398)
T ss_pred c--cccHHHHHHHHHHHHHcCCCCchhcCC--EEEEecCChHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeecCCC
Confidence 0 01122335778999999998 68873 788888877776777889998762 112210 0
Q ss_pred HHhccCCcccchHHHHHHHHHHhch
Q 047978 258 VLSEYGNMASATVLFVLDEMRKRSV 282 (320)
Q Consensus 258 ~~~~~Gn~~sasi~~~L~~~~~~~~ 282 (320)
=.--+||...|+=...+.+++.+..
T Consensus 338 G~la~Ghp~gatG~~~~~e~~~QLr 362 (398)
T PRK06157 338 GLKCFGHPIGASGLRMLYEMYLQLL 362 (398)
T ss_pred CcccCCCcccHhHHHHHHHHHHHhc
Confidence 0124799988887777787777643
No 102
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=98.67 E-value=7.7e-07 Score=84.38 Aligned_cols=99 Identities=14% Similarity=0.094 Sum_probs=70.7
Q ss_pred HHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHHHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcC
Q 047978 206 DKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEG 285 (320)
Q Consensus 206 ~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g 285 (320)
...++.+++++|++++|+| .+=+|-......-.+.+.||+.++++-.+ --.--+||...|+=...+.+++++...
T Consensus 283 ~~a~~~a~~~agi~~~did--~~e~~d~Fa~~~~~~~e~lG~~~~pvN~~-GG~l~~Ghp~gasG~~~~~e~~~qL~~-- 357 (382)
T PRK07801 283 IPATRYALEKTGLSIDDID--VVEINEAFAPVVLAWLKETGADPAKVNPN-GGAIALGHPLGATGAKLMTTLLHELER-- 357 (382)
T ss_pred HHHHHHHHHHcCCCHHHcC--EeeecccchHHHHHHHHHhCCCchhcCCC-cchhhhcCcHHHHHHHHHHHHHHHHHh--
Confidence 3678999999999999973 78888887777777889999987765332 123347999999988888888877431
Q ss_pred CCCCCCCCceEEEEeeccchhhhheeeee
Q 047978 286 KATTGEELEWGVLLGFEAGLTVEAIVLRS 314 (320)
Q Consensus 286 ~l~~G~~~d~vll~~~G~G~~~~a~~l~~ 314 (320)
+| ..+.+....|.|....+++++.
T Consensus 358 ---~~--~~~gl~~~~gggg~~~~~vl~~ 381 (382)
T PRK07801 358 ---TG--GRYGLQTMCEGGGTANVTIIER 381 (382)
T ss_pred ---cC--CCEEEEEEcccccceeEEEEEe
Confidence 22 1555656666666656666653
No 103
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase
Probab=98.65 E-value=1e-06 Score=85.00 Aligned_cols=245 Identities=12% Similarity=0.068 Sum_probs=141.6
Q ss_pred hHHHHHHHHHHHHHHcCCCCC-----CcCEEEEEeeCC-C-------------------------CCC-CHHHHHHHHcC
Q 047978 56 VPKLGKEAVSKAIKEWGQPIS-----KITHLISCSVSG-V-------------------------DMP-GADYQLTKLLG 103 (320)
Q Consensus 56 ~~~la~~Aa~~aL~~ag~~~~-----dId~li~~s~t~-~-------------------------~~p-~~a~~l~~~LG 103 (320)
...|+..|+.+||+++|+++. +...++++++.. . ..+ ..+.+|...+|
T Consensus 93 ~~~~~~~aa~~Al~dAg~~~~~~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~g 172 (437)
T PLN02836 93 FIGYALCAADEALSDARWLPSEDEAKERTGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVPRILINMAAGHVSIRYG 172 (437)
T ss_pred HHHHHHHHHHHHHHHcCCCcccccCCcCEEEEEeeccCcHHHHHHHHHHHHhcCCCCCChhhhhhhcccHHHHHHHHHhC
Confidence 356899999999999998542 355677776432 1 011 24568888899
Q ss_pred CCcc------hhhhhhh--------hhcCCCCeEEEEEeeccccc----------------------ccCCCCCCchhhh
Q 047978 104 LKPS------VKRVMLT--------AESNAGARVLVVCSEITVGT----------------------FRAPSDENLSCLV 147 (320)
Q Consensus 104 l~~~------~c~~~l~--------l~~~~~~~~LVv~~e~~s~~----------------------~~~~~~~~~~~~~ 147 (320)
++.. .|++.+. |++|..+.+||.+.|..... ...|-|. ..
T Consensus 173 l~Gp~~tv~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~pfd~----~~ 248 (437)
T PLN02836 173 FQGPNHAAVTACATGAHSIGDAFRMIQFGDADVMVAGGTESSIDALSIAGFSRSRALSTKFNSCPTEASRPFDC----DR 248 (437)
T ss_pred CCCceeceeChhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHHhhhhhcccCCCcccccCCccc----CC
Confidence 8753 3655332 78999999999888863110 0112111 12
Q ss_pred hhhhhccCceEEEEeecCCCC--CCCCeeEEeccCceecCCCcccccccccccceechhHHHHHHHHhhhcCCCCCCCCc
Q 047978 148 NRAIVGDGTAALIVGACPDIN--TERPLFHIVPTAQTILPDSEDAIKGHFRESPLIADNIDKFLAESFDQVSLNDHDWNS 225 (320)
Q Consensus 148 ~~~~~GDgAaA~ll~~~~~~~--~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~i~~~l~~~g~~~~d~~~ 225 (320)
.++++||||+++||++.+... -...+.++...+... +.... .....+ ......+++.+++++|++++||+
T Consensus 249 ~G~~~gEGaaalVLe~~~~A~~~g~~i~a~I~g~~~~~--d~~~~--~~p~~~---~~~~~~a~~~Al~~Agi~~~dId- 320 (437)
T PLN02836 249 DGFVIGEGAGVLVLEELEHAKRRGAKIYAEVRGYGMSG--DAHHI--TQPHED---GRGAVLAMTRALQQSGLHPNQVD- 320 (437)
T ss_pred CCeeeecCEEEEEEeeHHHHHHCCCceEEEEEeeeecC--CCCCC--cCCCcc---hHHHHHHHHHHHHHcCCCHhHcC-
Confidence 478899999999999865421 011223343322110 10000 001111 24456788999999999999873
Q ss_pred eEEEEcCCChhHHHH-----HHHHcCCCc--chhh-hhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCC--------
Q 047978 226 LFWMMHPIGPAVLDQ-----IEGKLGLEK--TKLR-ETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATT-------- 289 (320)
Q Consensus 226 ~~~i~h~~~~~~~~~-----~~~~lg~~~--e~~~-~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~-------- 289 (320)
++-.|-.+...-+. +.+.++-.. ..+. .+ +-..+||+.+|+=.+.|...+.. ++++.+.|
T Consensus 321 -~ve~hgtgt~~~D~~E~~ai~~~~~~~~~~~~~~v~s--~K~~~GH~~~AsG~~~li~~~l~-l~~~~ipp~~n~~~~~ 396 (437)
T PLN02836 321 -YVNAHATSTPLGDAVEARAIKTVFSEHATSGGLAFSS--TKGATGHLLGAAGAVEAIFSVLA-IHHGIAPPTLNLERPD 396 (437)
T ss_pred -EEEccCCcCcCcCHHHHHHHHHHhcccccCCCCeeEC--CcccccccHHHHHHHHHHHHHHH-HhcCccCCCCCCCCCC
Confidence 88899776543333 334443111 1111 12 24457999888766655443221 11133211
Q ss_pred --------------CCCCceEEEEeeccchhhhheeeeecc
Q 047978 290 --------------GEELEWGVLLGFEAGLTVEAIVLRSIP 316 (320)
Q Consensus 290 --------------G~~~d~vll~~~G~G~~~~a~~l~~~~ 316 (320)
....+.+|.-+||-|.+-++++++..|
T Consensus 397 p~~~~~~~~~~~~~~~~~~~~l~nsfgfGG~na~lvl~~~~ 437 (437)
T PLN02836 397 PIFDDGFVPLTASKAMLIRAALSNSFGFGGTNASLLFTSPP 437 (437)
T ss_pred CCCCcccCcccCCCCCCccEEEEecccCCCeeEEEEEecCC
Confidence 001245677799999999999998765
No 104
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=98.64 E-value=2.1e-06 Score=81.40 Aligned_cols=81 Identities=14% Similarity=-0.011 Sum_probs=58.8
Q ss_pred ccchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCC-CC-CCCHHHHHHHHcCCCcc--------hhhhhhh--------
Q 047978 53 VPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSG-VD-MPGADYQLTKLLGLKPS--------VKRVMLT-------- 114 (320)
Q Consensus 53 ~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~-~~-~p~~a~~l~~~LGl~~~--------~c~~~l~-------- 114 (320)
+.++.+|+..|++++|++++++++|||.+|+++..+ .. .+..+....-..|++.. .|++-+.
T Consensus 23 ~~~~~~L~~~a~~~al~~a~l~~~~Id~vi~G~~~~~~~~~~~~ar~~~l~~gl~~~vP~~tV~~~CaSG~~Ai~~A~~~ 102 (390)
T PRK06504 23 GWHPADLAAQVLDALVDRSGADPALIEDVIMGCVSQVGEQATNVARNAVLASKLPESVPGTSIDRQCGSSQQALHFAAQA 102 (390)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCceEEEechhhHHHHHHHHHHHH
Confidence 667899999999999999999999999999987764 21 23333322222355421 2653211
Q ss_pred hhcCCCCeEEEEEeecccc
Q 047978 115 AESNAGARVLVVCSEITVG 133 (320)
Q Consensus 115 l~~~~~~~~LVv~~e~~s~ 133 (320)
+++|..+.+|+++.|..|.
T Consensus 103 I~sG~~dvvLagGvEsmS~ 121 (390)
T PRK06504 103 VMSGTMDIVIAAGVESMTR 121 (390)
T ss_pred HHCCCCCEEEEeeeeecCC
Confidence 7899999999999998864
No 105
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.62 E-value=1.3e-06 Score=83.41 Aligned_cols=237 Identities=15% Similarity=0.140 Sum_probs=138.1
Q ss_pred hHHHHHHHHHHHHHHcCCCC------CCcCEEEEEeeCC-C-------------------------CCCC-HHHHHHHHc
Q 047978 56 VPKLGKEAVSKAIKEWGQPI------SKITHLISCSVSG-V-------------------------DMPG-ADYQLTKLL 102 (320)
Q Consensus 56 ~~~la~~Aa~~aL~~ag~~~------~dId~li~~s~t~-~-------------------------~~p~-~a~~l~~~L 102 (320)
...|+..|+++||+++|+.. +++. ++++++.+ . .+|. .+.+|+..+
T Consensus 73 ~~~~al~aa~~Al~dAGl~~~~~~~~~r~G-v~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~ 151 (405)
T PRK09116 73 VSLMATRASELALEDAGLLGDPILTDGRMG-IAYGSSTGSTDPIGAFGTMLLEGSMSGITATTYVRMMPHTTAVNVGLFF 151 (405)
T ss_pred HHHHHHHHHHHHHHHcCCCCccccCCCcEE-EEEeecccchHHHHHHHHHHhhcCccccChhhhhhhcccHHHHHHHHHh
Confidence 35689999999999999832 3343 55555322 0 1232 567889999
Q ss_pred CCCcc------hhhhhhh--------hhcCCCCeEEEEEeeccccc----c----------------cCCCCCCchhhhh
Q 047978 103 GLKPS------VKRVMLT--------AESNAGARVLVVCSEITVGT----F----------------RAPSDENLSCLVN 148 (320)
Q Consensus 103 Gl~~~------~c~~~l~--------l~~~~~~~~LVv~~e~~s~~----~----------------~~~~~~~~~~~~~ 148 (320)
|++.. .|++.+. |+++..+.+||.++|..+.. | ..|-|. .-.
T Consensus 152 ~~~Gp~~ti~~acas~~~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~f~~l~~~~~~~~~~~~~~rPfd~----~~~ 227 (405)
T PRK09116 152 GLKGRVIPTSSACTSGSQGIGYAYEAIKYGYQTVMLAGGAEELCPTEAAVFDTLFATSTRNDAPELTPRPFDA----NRD 227 (405)
T ss_pred CCCCCcccccchhhhHHHHHHHHHHHHHcCCCCEEEEecchhcChHHHHHHHHhhhhccCCCCCCCCCCCCcC----CCC
Confidence 98764 3654332 78899999999999875320 0 011111 124
Q ss_pred hhhhccCceEEEEeecCCC--CCCCCeeEEeccCceecCCCcccccccccccceechhHHHHHHHHhhhcCCCCCCCCce
Q 047978 149 RAIVGDGTAALIVGACPDI--NTERPLFHIVPTAQTILPDSEDAIKGHFRESPLIADNIDKFLAESFDQVSLNDHDWNSL 226 (320)
Q Consensus 149 ~~~~GDgAaA~ll~~~~~~--~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~i~~~l~~~g~~~~d~~~~ 226 (320)
++++|+||+++||++.+.. .-.+.+-++...+... +... ....+ .....+.++++|++++++++|+ .
T Consensus 228 G~v~gEGa~~~vLe~~~~A~~rga~i~a~i~g~~~~~--d~~~----~~~p~---~~~~~~ai~~AL~~Agi~p~dI--d 296 (405)
T PRK09116 228 GLVIGEGAGTLVLEELEHAKARGATIYAEIVGFGTNS--DGAH----VTQPQ---AETMQIAMELALKDAGLAPEDI--G 296 (405)
T ss_pred CEeeeccEEEEEEccHHHHHhCCCceEEEEEEEEEcC--CCCc----CCCCC---HHHHHHHHHHHHHHhCCCHHHc--C
Confidence 7899999999999975432 1011222333322110 1000 01111 2556788999999999999986 3
Q ss_pred EEEEcCCChhHH-----HHHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCC---------CC-
Q 047978 227 FWMMHPIGPAVL-----DQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATT---------GE- 291 (320)
Q Consensus 227 ~~i~h~~~~~~~-----~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~---------G~- 291 (320)
++.+|-.+...- ..+.+.++- +....+ +-..+||+.+|+-.+.+...+.. +++|.+.| ..
T Consensus 297 ~I~~Hgtgt~~~D~~E~~Ai~~~fg~--~~pv~s--~K~~~GH~~~AaG~~~~~~~~~~-l~~~~ippt~~~~~~~~~~~ 371 (405)
T PRK09116 297 YVNAHGTATDRGDIAESQATAAVFGA--RMPISS--LKSYFGHTLGACGALEAWMSIEM-MNEGWFAPTLNLTQVDPACG 371 (405)
T ss_pred EEECcCccCCCCCHHHHHHHHHHhCC--CCeeEC--cchhhcccHHHHHHHHHHHHHHH-HHcCccCCCCCCCCCCCCCc
Confidence 889997655332 334556652 111122 34568999777655544433221 01133211 00
Q ss_pred ------------CCceEEEEeeccchhhhheeee
Q 047978 292 ------------ELEWGVLLGFEAGLTVEAIVLR 313 (320)
Q Consensus 292 ------------~~d~vll~~~G~G~~~~a~~l~ 313 (320)
..+++|.-+||-|..-.+++++
T Consensus 372 ~l~~v~~~~~~~~~~~~l~nsfGfGG~n~~lvl~ 405 (405)
T PRK09116 372 ALDYIMGEAREIDTEYVMSNNFAFGGINTSLIFK 405 (405)
T ss_pred ccCccCCCCccCCCCEEEEeeecCCcccEEEEEC
Confidence 0156788899999888888875
No 106
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.60 E-value=1e-06 Score=84.42 Aligned_cols=244 Identities=13% Similarity=0.114 Sum_probs=142.1
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcC----EEEEEeeCC-C-------------------------CCC-CHHHHHHHHcCCC
Q 047978 57 PKLGKEAVSKAIKEWGQPISKIT----HLISCSVSG-V-------------------------DMP-GADYQLTKLLGLK 105 (320)
Q Consensus 57 ~~la~~Aa~~aL~~ag~~~~dId----~li~~s~t~-~-------------------------~~p-~~a~~l~~~LGl~ 105 (320)
..++..|+++||+++|+++++.+ .++++++.. + ..| ..+.+|...+|++
T Consensus 75 ~~~~l~a~~~Al~dAGl~~~~~~~~r~Gv~vGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~gl~ 154 (414)
T PRK08722 75 IQYGIAAGIQALDDSGLEVTEENAHRIGVAIGSGIGGLGLIEAGHQALVEKGPRKVSPFFVPSTIVNMIAGNLSIMRGLR 154 (414)
T ss_pred HHHHHHHHHHHHHHcCCCccccCCCCEEEEEeeCCCcchhHHHHHHHHHhcCcccCCchhcccccccHHHHHHHHHhCCC
Confidence 45789999999999999754433 255555421 1 112 2577888899987
Q ss_pred cc------hhhhhhh--------hhcCCCCeEEEEEeecccccc----------cC-----CCC--CCchhhhhhhhhcc
Q 047978 106 PS------VKRVMLT--------AESNAGARVLVVCSEITVGTF----------RA-----PSD--ENLSCLVNRAIVGD 154 (320)
Q Consensus 106 ~~------~c~~~l~--------l~~~~~~~~LVv~~e~~s~~~----------~~-----~~~--~~~~~~~~~~~~GD 154 (320)
.. .|++.+. |++|..+.+||.++|.....+ .. |+. +..+..-.+++.||
T Consensus 155 Gp~~ti~~aCas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~~~~G~~~gE 234 (414)
T PRK08722 155 GPNIAISTACTTGLHNIGHAARMIAYGDADAMVAGGAEKASTPLGMAGFGAAKALSTRNDEPQKASRPWDKDRDGFVLGD 234 (414)
T ss_pred CCccccccccHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHcCCcccCCCCCccccCcCcCCCCceEeec
Confidence 53 3655332 789999999999999753211 00 100 00011225788999
Q ss_pred CceEEEEeecCCCC-C-CCCeeEEeccCceecCCCcccccccccccceechhHHHHHHHHhhhcCCCCCCCCceEEEEcC
Q 047978 155 GTAALIVGACPDIN-T-ERPLFHIVPTAQTILPDSEDAIKGHFRESPLIADNIDKFLAESFDQVSLNDHDWNSLFWMMHP 232 (320)
Q Consensus 155 gAaA~ll~~~~~~~-~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~ 232 (320)
||+++||++.+... . .+.+.++...+.. .+..... ....+ ......+++.+++++|++++||+ ++-.|-
T Consensus 235 GaaalvLe~~~~A~~~g~~i~a~i~g~~~~--~d~~~~~--~p~~~---~~~~~~a~~~Al~~agi~~~did--~ie~hg 305 (414)
T PRK08722 235 GAGMMVLEEYEHAKARGAKIYAELVGFGMS--GDAYHMT--SPSED---GSGGALAMEAAMRDAGVTGEQIG--YVNAHG 305 (414)
T ss_pred eEEEEEEccHHHHHHCCCeEEEEEEEEEEc--CCCCCCC--CCCcc---hHHHHHHHHHHHHHcCCCHHHcC--EEEccC
Confidence 99999999865421 1 1112233332111 0100000 01111 13345778999999999999863 888888
Q ss_pred CChhHHHH-----HHHHcCCC-cchhhhhHHHHhccCCcccchHHHHHHHH---HHhchhcCCCCC--------------
Q 047978 233 IGPAVLDQ-----IEGKLGLE-KTKLRETRHVLSEYGNMASATVLFVLDEM---RKRSVEEGKATT-------------- 289 (320)
Q Consensus 233 ~~~~~~~~-----~~~~lg~~-~e~~~~~~~~~~~~Gn~~sasi~~~L~~~---~~~~~~~g~l~~-------------- 289 (320)
.+...-|. +.+.++-. .++++.+ .+-..+||+.+|+=.+.|... +++ |.+.|
T Consensus 306 tgt~~~D~~E~~al~~~fg~~~~~~~~v~-s~K~~~GH~~~AaG~~~~~~~~l~l~~----~~ipp~~n~~~~~~~~~~~ 380 (414)
T PRK08722 306 TSTPAGDVAEIKGIKRALGEAGSKQVLVS-STKSMTGHLLGAAGSVEAIITVMSLVD----QIVPPTINLDDPEEGLDID 380 (414)
T ss_pred ccCCCCCHHHHHHHHHHhcccCCCCceee-CcccccccchHHHHHHHHHHHHHHHhc----CccCCCCCCCCCCCCCCcc
Confidence 76544333 34555521 2233222 134568999988877666443 333 33211
Q ss_pred ---C-----CCCceEEEEeeccchhhhheeeee
Q 047978 290 ---G-----EELEWGVLLGFEAGLTVEAIVLRS 314 (320)
Q Consensus 290 ---G-----~~~d~vll~~~G~G~~~~a~~l~~ 314 (320)
. ...++++.-+||-|.+-.+++++.
T Consensus 381 ~v~~~~~~~~~~~~~l~nsfGfGG~n~~lvl~~ 413 (414)
T PRK08722 381 LVPHTARKVESMEYAICNSFGFGGTNGSLIFKK 413 (414)
T ss_pred cCCCccccCCCCCEEEEecccCCCceEEEEEec
Confidence 0 012567888999998888888864
No 107
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional
Probab=98.56 E-value=1.9e-06 Score=80.24 Aligned_cols=243 Identities=15% Similarity=0.140 Sum_probs=140.4
Q ss_pred HHHHHHHHHHHHHHcCC--CCCCcCEEEEEeeCCC-----------------C--------CC-CHHHHHHHHcCCCcc-
Q 047978 57 PKLGKEAVSKAIKEWGQ--PISKITHLISCSVSGV-----------------D--------MP-GADYQLTKLLGLKPS- 107 (320)
Q Consensus 57 ~~la~~Aa~~aL~~ag~--~~~dId~li~~s~t~~-----------------~--------~p-~~a~~l~~~LGl~~~- 107 (320)
..++..|++++|+++|+ +++++..++-.+.... . +| ..+.+|...+|++..
T Consensus 5 ~~~~~~a~~~a~~~a~~~~~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~~l~Gp~ 84 (342)
T PRK14691 5 WRYKWITFHPSLTHADNTEKQERTATIIGAGIGGFPAIAHAVRTSDSRGPKRLSPFTVPSFLVNLAAGHVSIKHHFKGPI 84 (342)
T ss_pred HHHHHHHHHHHHHhCCCCCCcccEEEEEecCcccHHHHHHHHHHHHhcCccccChhHHhhhhhhHHHHHHHHHhCCCCCc
Confidence 46888999999999995 6778875554331111 0 11 256778888888753
Q ss_pred -----hhhhhhh--------hhcCCCCeEEEEEeeccccc-----c-----c------CCCCC--CchhhhhhhhhccCc
Q 047978 108 -----VKRVMLT--------AESNAGARVLVVCSEITVGT-----F-----R------APSDE--NLSCLVNRAIVGDGT 156 (320)
Q Consensus 108 -----~c~~~l~--------l~~~~~~~~LVv~~e~~s~~-----~-----~------~~~~~--~~~~~~~~~~~GDgA 156 (320)
.|++.+. |+.|..+.+||.++|..... | . +|... ..+..-.++++||||
T Consensus 85 ~ti~~aCaSg~~Al~~A~~~I~~G~~d~~ivgg~d~~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~r~G~v~gEGA 164 (342)
T PRK14691 85 GAPVTACAAGVQAIGDAVRMIRNNEADVALCGGAEAVIDTVSLAGFAAARALSTHFNSTPEKASRPFDTARDGFVMGEGA 164 (342)
T ss_pred cccccHhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHhhhhhcCCCCCCCcCCCCCCCCCCCccccceE
Confidence 3654332 78899999999998874210 0 0 01100 001122578999999
Q ss_pred eEEEEeecCCC--CCCCCeeEEeccCceecCCCcccccccccccceechhHHHHHHHHhhhcCCCCCCCCceEEEEcCCC
Q 047978 157 AALIVGACPDI--NTERPLFHIVPTAQTILPDSEDAIKGHFRESPLIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIG 234 (320)
Q Consensus 157 aA~ll~~~~~~--~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~ 234 (320)
+++||++.+.. .-..+..++...+......... ....+ ......+++.+|+++|++++|+ +++-.|-.+
T Consensus 165 a~lvLes~~~A~~rG~~i~a~I~g~~~~~d~~~~~----~p~p~---~~~~~~ai~~AL~~Agl~p~dI--dyIeaHgtg 235 (342)
T PRK14691 165 GLLIIEELEHALARGAKPLAEIVGYGTSADAYHMT----SGAED---GDGAYRAMKIALRQAGITPEQV--QHLNAHATS 235 (342)
T ss_pred EEEEEeeHHHHHhCCCCceEEEEEEEEEcCCCCCC----CCCCC---HHHHHHHHHHHHHHcCCCHHHC--CEEEecCCC
Confidence 99999976542 1112334554432221110000 01111 2456678999999999999987 388899876
Q ss_pred hhHHHH-----HHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHH---HHhchhcCCCCC-----------------
Q 047978 235 PAVLDQ-----IEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEM---RKRSVEEGKATT----------------- 289 (320)
Q Consensus 235 ~~~~~~-----~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~---~~~~~~~g~l~~----------------- 289 (320)
...-|. +.+.+|-. .+++.+ ++-..+||+.+|+-.+.+... +++ +.+.|
T Consensus 236 T~~~D~~E~~Ai~~~fg~~-~~~~v~-s~K~~~GH~~~AaG~~~~~~~~l~l~~----~~ippt~n~~~~d~~~~~~~~v 309 (342)
T PRK14691 236 TPVGDLGEINAIKHLFGES-NALAIT-STKSATGHLLGAAGGLETIFTVLALRD----QIVPATLNLENPDPAAKGLNII 309 (342)
T ss_pred CcCCCHHHHHHHHHHhCCC-CCceEE-CCcccccCCcchhhHHHHHHHHHHHhC----CccCCcCCCCCCCccccccCcc
Confidence 554333 44555521 122221 134568998666543333322 222 32211
Q ss_pred -CC----CCceEEEEeeccchhhhheeeee
Q 047978 290 -GE----ELEWGVLLGFEAGLTVEAIVLRS 314 (320)
Q Consensus 290 -G~----~~d~vll~~~G~G~~~~a~~l~~ 314 (320)
+. ..+++|.-+||-|..-++++|+.
T Consensus 310 ~~~~~~~~~~~al~nsfgfGG~n~~lvl~~ 339 (342)
T PRK14691 310 AGNAQPHDMTYALSNGFGFAGVNASILLKR 339 (342)
T ss_pred cCCCccCCCCEEEEeCccCCCeeEEEEEee
Confidence 00 11567888999999988898875
No 108
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=98.53 E-value=4.8e-06 Score=79.96 Aligned_cols=81 Identities=14% Similarity=0.024 Sum_probs=61.3
Q ss_pred ccchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCC-CCCCCHHHHHHHHcCCCcc--------hhhhhhh--------h
Q 047978 53 VPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSG-VDMPGADYQLTKLLGLKPS--------VKRVMLT--------A 115 (320)
Q Consensus 53 ~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~-~~~p~~a~~l~~~LGl~~~--------~c~~~l~--------l 115 (320)
+.+..+|+..|++++|+++++++++||.+|++++.+ ...+..+..+.-..|++.. .|++-+. +
T Consensus 28 ~~~~~~L~~~a~~~al~~agl~~~~Id~vi~G~~~~~~~~~~~ar~~~l~aGl~~~~p~~~V~~~CaSG~~A~~~a~~~I 107 (430)
T TIGR02446 28 GIPAVDLGKMVVSELLARSEIDPKLIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVTRACATSFQSAVNVAESI 107 (430)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCcCccchHHHHHHHhCCCCCCCchhhhhhhhhHHHHHHHHHHHHH
Confidence 668899999999999999999999999999998765 2223344444444688732 2653211 7
Q ss_pred hcCCCCeEEEEEeecccc
Q 047978 116 ESNAGARVLVVCSEITVG 133 (320)
Q Consensus 116 ~~~~~~~~LVv~~e~~s~ 133 (320)
++|..+.+|+++.|+.|.
T Consensus 108 ~sG~~dvvla~G~E~mS~ 125 (430)
T TIGR02446 108 MAGAIDIGIAGGADSSSV 125 (430)
T ss_pred HCCCCCEEEEeeeEcccC
Confidence 889999999999999873
No 109
>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A.
Probab=98.52 E-value=1.4e-06 Score=77.66 Aligned_cols=230 Identities=15% Similarity=0.166 Sum_probs=116.4
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcc----hhhhhhh--------hhcCCCCeE
Q 047978 56 VPKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPS----VKRVMLT--------AESNAGARV 123 (320)
Q Consensus 56 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~----~c~~~l~--------l~~~~~~~~ 123 (320)
-..|..+|++.+|+|+++.++|||+++-+---.... .+++.++.|+++-- +|+++.- +.++-.+++
T Consensus 51 E~~m~~~A~~~al~Ka~l~~~dId~~~aGDLlnQ~i--~s~f~ar~l~iPf~GlygACST~~e~l~laa~~vdgg~a~~v 128 (329)
T PF07451_consen 51 ESKMQKEAVELALKKAGLKKEDIDYLFAGDLLNQII--SSSFAARDLGIPFLGLYGACSTMMESLALAAMLVDGGFADYV 128 (329)
T ss_dssp HHHHHHHHHHHHHHHTT--GGG-SEEEEEETTCCCC--HHHHHHHHHT--EEEB--CCCHHHHHHHHHHHHHHTTS-SEE
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCeEEEehhhhhhhH--HHHHHHHhcCCCccchhhHHHHHHHHHHHHHHHHhCCCcceE
Confidence 356779999999999999999999886554333333 46899999999853 4776432 677889999
Q ss_pred EEEEeecccc---cccCCCCCCchhhhhhhhhccCceEEEEeecCCCCCCCCeeEEeccCceecCC-Ccccccccccccc
Q 047978 124 LVVCSEITVG---TFRAPSDENLSCLVNRAIVGDGTAALIVGACPDINTERPLFHIVPTAQTILPD-SEDAIKGHFRESP 199 (320)
Q Consensus 124 LVv~~e~~s~---~~~~~~~~~~~~~~~~~~~GDgAaA~ll~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~~~g 199 (320)
|..++..... .|+.|.+.-.+...+...--=||+|+||++.+.. +...-.+.|.- ... -.++ ..|..
T Consensus 129 la~tSSH~~tAERQfR~P~EyG~Qrp~tAqwTVTGaGa~il~~~~~~----p~It~~T~GkV-vD~G~~D~----~nMGa 199 (329)
T PF07451_consen 129 LAATSSHFATAERQFRFPTEYGGQRPPTAQWTVTGAGAAILSKEGSG----PRITHATIGKV-VDMGIKDP----NNMGA 199 (329)
T ss_dssp EEEEEE-CCHHHHHT---GGGT----TT--EE--EEEEEEEESS--S----EEEEEEE-----B-SS---T----T-HHH
T ss_pred EEEeccccchhhhhccCchhccCCCCCcccEEEeceEEEEEecCCCC----cEEEEEEEEEE-EEcCCCCc----ccchh
Confidence 9999887753 3555543211111222233468999999987663 22222221111 100 0111 11111
Q ss_pred eechhHHHHHHHHhhhcCCCCCCCCceEEEEcC---CChhHHHHHHHHcCCCcchhhhh--------H-HHHhccCCcc-
Q 047978 200 LIADNIDKFLAESFDQVSLNDHDWNSLFWMMHP---IGPAVLDQIEGKLGLEKTKLRET--------R-HVLSEYGNMA- 266 (320)
Q Consensus 200 ~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~---~~~~~~~~~~~~lg~~~e~~~~~--------~-~~~~~~Gn~~- 266 (320)
--...-...|...|+..|.+++|+| .++.-- .+..++..+.++-|++.++.+.+ . .... -|-.|
T Consensus 200 AMAPAA~dTI~~h~~D~g~~p~dYD--lIvTGDLg~vG~~il~~Ll~~~G~~i~~~~~DCG~~iyd~~~Qdv~-aGGSGc 276 (329)
T PF07451_consen 200 AMAPAAADTIEQHFKDTGRSPDDYD--LIVTGDLGKVGRKILRDLLKEKGYDISENYNDCGLMIYDPEKQDVH-AGGSGC 276 (329)
T ss_dssp HHHHHHHHHHHHHHHHCT--GGG-S--EEEESS-HHHHHHHHHHHHHHTT---GGGEEEHHHCSS-TT-S--T-T-EESH
T ss_pred hHhHHHHHHHHHHHHHhCCChhhcC--eEEecchHHHHHHHHHHHHHHcCCCCccccccCCeEeecCCccccc-cCCCCc
Confidence 0123344677788999999999974 555544 34678888888888876653221 0 0011 13344
Q ss_pred cchHHHHHHHHHHhchhcCCCCCCCCCceEEEEeeccchh
Q 047978 267 SATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLT 306 (320)
Q Consensus 267 sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~ 306 (320)
++|-.+...++++. +++|++ .|||+++.|+=++
T Consensus 277 gCSA~V~~g~ll~~-l~~g~~------krvL~vaTGALlS 309 (329)
T PF07451_consen 277 GCSAVVLCGYLLPK-LRKGEL------KRVLFVATGALLS 309 (329)
T ss_dssp HHHHHHHHHCHHHH-HHTTS-------SEEEEEEEEE---
T ss_pred chHHHHHHHHHHHH-HHcCCc------eEEEEEEchhhcC
Confidence 34444444455543 222444 6899999987443
No 110
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=98.52 E-value=1.7e-06 Score=82.56 Aligned_cols=235 Identities=15% Similarity=0.126 Sum_probs=138.1
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCcC----EEEEEeeCC-C-----------------C----C----C-CHHHHHHHHcCC
Q 047978 56 VPKLGKEAVSKAIKEWGQPISKIT----HLISCSVSG-V-----------------D----M----P-GADYQLTKLLGL 104 (320)
Q Consensus 56 ~~~la~~Aa~~aL~~ag~~~~dId----~li~~s~t~-~-----------------~----~----p-~~a~~l~~~LGl 104 (320)
...|+..|+++||+++|+++++++ .|+++++.. + . . + ..+.+|+..+|+
T Consensus 71 ~~~~~l~aa~eAl~dAGl~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (399)
T cd00832 71 MTRLALAAADWALADAGVDPAALPPYDMGVVTASAAGGFEFGQRELQKLWSKGPRHVSAYQSFAWFYAVNTGQISIRHGM 150 (399)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCceEEEEccCCccHHHHHHHHHHHHhcCccccChhhhhhhhhhHHHHHHHHHhCC
Confidence 456899999999999999876543 255555432 1 0 1 1 245688888998
Q ss_pred Ccc------hhhhhhh--------hhcCCCCeEEEEEeeccccc----------cc----------CCCCCCchhhhhhh
Q 047978 105 KPS------VKRVMLT--------AESNAGARVLVVCSEITVGT----------FR----------APSDENLSCLVNRA 150 (320)
Q Consensus 105 ~~~------~c~~~l~--------l~~~~~~~~LVv~~e~~s~~----------~~----------~~~~~~~~~~~~~~ 150 (320)
+.. .|++.+. |+++. +.+|+.++|..... .. .|-|. .-.++
T Consensus 151 ~Gp~~ti~~acaS~~~Al~~A~~~i~~G~-d~~i~gg~d~~~~p~~~~~~~~~~~ls~~~~p~~~~rPFd~----~~~G~ 225 (399)
T cd00832 151 RGPSGVVVAEQAGGLDALAQARRLVRRGT-PLVVSGGVDSALCPWGWVAQLSSGRLSTSDDPARAYLPFDA----AAAGY 225 (399)
T ss_pred CCCcccccchhHHHHHHHHHHHHHHHcCC-CeEEEEeeccccCHHHHHHHHhccccCCCCCCCCCcCCCcC----CCCCE
Confidence 753 2654322 78888 88998888863210 00 11111 22578
Q ss_pred hhccCceEEEEeecCCCC--CCCCeeEEeccCceecCCCcccccccccccceechhHHHHHHHHhhhcCCCCCCCCceEE
Q 047978 151 IVGDGTAALIVGACPDIN--TERPLFHIVPTAQTILPDSEDAIKGHFRESPLIADNIDKFLAESFDQVSLNDHDWNSLFW 228 (320)
Q Consensus 151 ~~GDgAaA~ll~~~~~~~--~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~i~~~l~~~g~~~~d~~~~~~ 228 (320)
++|+||+++||++.+... -.+.+-++...+....+.. .... .....++++.+|+++|++++|+ .++
T Consensus 226 ~~gEGa~~lvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~-------~~~~---~~~~~~a~~~al~~ag~~~~~i--~~v 293 (399)
T cd00832 226 VPGEGGAILVLEDAAAARERGARVYGEIAGYAATFDPPP-------GSGR---PPGLARAIRLALADAGLTPEDV--DVV 293 (399)
T ss_pred eeeceEEEEEEeeHHHHHHCCCeEEEEEEeEEEcCCCCC-------CCCC---HHHHHHHHHHHHHHcCCCHHHc--cEE
Confidence 999999999999875421 1111223333222111111 0011 3567788999999999999986 388
Q ss_pred EEcCCChhHHH-----HHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCC---------------
Q 047978 229 MMHPIGPAVLD-----QIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKAT--------------- 288 (320)
Q Consensus 229 i~h~~~~~~~~-----~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~--------------- 288 (320)
..|-.+....| .+.+.++-. +++.+ .+-..+||+.+|+=.+.|...+... +++.+.
T Consensus 294 ~~hgtgt~~~D~~E~~al~~~fg~~--~~pv~-s~K~~~Gh~~~aaG~~~l~~~~l~l-~~~~ipp~~n~~~~~p~~~l~ 369 (399)
T cd00832 294 FADAAGVPELDRAEAAALAAVFGPR--GVPVT-APKTMTGRLYAGGAPLDVATALLAL-RDGVIPPTVNVTDVPPAYGLD 369 (399)
T ss_pred EeccCcCCCCCHHHHHHHHHHhCCC--CCcee-CCCchhcchHHHHHHHHHHHHHHHH-hCCCcCCCCCCCCCCCCCCcc
Confidence 99986654433 344555531 22111 1234579999988888776543210 013221
Q ss_pred -------CCCCCceEEEEeeccchhhhheee
Q 047978 289 -------TGEELEWGVLLGFEAGLTVEAIVL 312 (320)
Q Consensus 289 -------~G~~~d~vll~~~G~G~~~~a~~l 312 (320)
+. ..++++.-+||-|..-.++++
T Consensus 370 ~v~~~~~~~-~~~~al~nsfgfGG~na~lvl 399 (399)
T cd00832 370 LVTGRPRPA-ALRTALVLARGRGGFNSALVV 399 (399)
T ss_pred cCCCcccCC-CCCEEEEeccCCCCcceEEEC
Confidence 11 116678888988877666553
No 111
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.51 E-value=9.6e-06 Score=77.15 Aligned_cols=233 Identities=12% Similarity=0.046 Sum_probs=136.2
Q ss_pred hHHHHHHHHHHHHHHcCCCC-----CCcCEEEEEeeCCC-------------------------------------CCC-
Q 047978 56 VPKLGKEAVSKAIKEWGQPI-----SKITHLISCSVSGV-------------------------------------DMP- 92 (320)
Q Consensus 56 ~~~la~~Aa~~aL~~ag~~~-----~dId~li~~s~t~~-------------------------------------~~p- 92 (320)
...|+..|+++||+++|+++ ++++.++..+.... .+|
T Consensus 73 ~~~~a~~Aa~~Al~dAGl~~~~~~~~r~GvivGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n 152 (398)
T PRK06519 73 WQRLGTYAAGLALDDAGIKGNEELLSTMDMIVAAGGGERDIAVDTAILNEARKRNDRGVLLNERLMTELRPTLFLAQLSN 152 (398)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCCccceEEEEEeCCCchhHHHhhhhhhcccchhHHHHHHHhcCCCccChhhhhhhhhh
Confidence 45689999999999999854 34554444332211 011
Q ss_pred CHHHHHHHHcCCCcc------hhhhhhh--------hhcCCCCeEEEEEeeccccc----------ccC-----C-CCCC
Q 047978 93 GADYQLTKLLGLKPS------VKRVMLT--------AESNAGARVLVVCSEITVGT----------FRA-----P-SDEN 142 (320)
Q Consensus 93 ~~a~~l~~~LGl~~~------~c~~~l~--------l~~~~~~~~LVv~~e~~s~~----------~~~-----~-~~~~ 142 (320)
..+.+|...+|++.. .|++.+. |+++..+.+||.++|..... +.. | .|+.
T Consensus 153 ~~a~~is~~~gl~Gp~~ti~~acaSg~~Ai~~A~~~I~~G~~d~~lvGG~d~~~~~~~~~~~~~~~~ls~~~~~p~~d~~ 232 (398)
T PRK06519 153 LLAGNISIVHKVTGSSRTFMGEESAGVSAIEIAFARIASGQSDHALVGGAYNAERPDMLLLYELGGLLLKGGWAPVWSRG 232 (398)
T ss_pred HHHHHHHHHhCCCCccccccCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHcCccCCCCCCchhccC
Confidence 245678888888753 2554322 78999999999999863210 111 1 1110
Q ss_pred chhhhhhhhhccCceEEEEeecCCC--CCCCCeeEEeccCceecCCCcccccccccccceechhHHHHHHHHhhhcCCCC
Q 047978 143 LSCLVNRAIVGDGTAALIVGACPDI--NTERPLFHIVPTAQTILPDSEDAIKGHFRESPLIADNIDKFLAESFDQVSLND 220 (320)
Q Consensus 143 ~~~~~~~~~~GDgAaA~ll~~~~~~--~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~i~~~l~~~g~~~ 220 (320)
.. .-.+++.|+||+++||++.+.. .-...+-++...+....|. . ...+.++++.+|+.+|+ +
T Consensus 233 ~~-~r~G~v~GEGAa~lvLE~~~~A~~Rga~i~AeI~G~~~d~~~~-----------~---~~~~~~am~~AL~~Agl-~ 296 (398)
T PRK06519 233 GE-DGGGFILGSGGAFLVLESREHAEARGARPYARISGVESDRARR-----------A---PGDLEASLERLLKPAGG-L 296 (398)
T ss_pred cc-CCCCeeeeceEEEEEEeeHHHHHhCCCceEEEEEEEeecCCCC-----------C---hHHHHHHHHHHHHHCCC-c
Confidence 00 1358899999999999986642 1111223444322110010 1 23567899999999999 7
Q ss_pred CCCCceEEEEcCCChhHHH-----HHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCCCCCC--
Q 047978 221 HDWNSLFWMMHPIGPAVLD-----QIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEEL-- 293 (320)
Q Consensus 221 ~d~~~~~~i~h~~~~~~~~-----~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~-- 293 (320)
+|| +++..|-.+.+.-| .+.+.++.|... +-..+||+.+|+=.+.+.-.+.. +++|.+.|.-.-
T Consensus 297 ~~I--dyI~ahgtgT~~~D~~E~~Ai~~~f~~pvsS------~Ks~~GH~l~AAGa~e~i~~~la-l~~g~vpp~~n~~~ 367 (398)
T PRK06519 297 AAP--TAVISGATGAHPATAEEKAALEAALAGPVRG------IGTLFGHTMEAQFPLGLALAALS-VSKGALFPPFDASG 367 (398)
T ss_pred ccC--CEEEeCCCCCCCccHHHHHHHHHHcCCCccc------cchhhccchHHHHHHHHHHHHHH-HhcCccCCCCCCCc
Confidence 886 38999987755433 345566754222 35558999998877766554332 111554321100
Q ss_pred --------ceEEEEeeccchhhhheeee
Q 047978 294 --------EWGVLLGFEAGLTVEAIVLR 313 (320)
Q Consensus 294 --------d~vll~~~G~G~~~~a~~l~ 313 (320)
...|..++|-|-.=++.+++
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (398)
T PRK06519 368 EKPMSGAAREAVVTTVGHWRGEGMALVE 395 (398)
T ss_pred ccCccccccEEEEEeeccCCcceeEEEE
Confidence 23667777766555555544
No 112
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II
Probab=98.50 E-value=2.8e-06 Score=83.53 Aligned_cols=242 Identities=13% Similarity=0.087 Sum_probs=139.4
Q ss_pred HHHHHHHHHHHHHHcCCCCCCc---C----EEEEEeeCC---------------------CCCC-----CHHHHHHHHcC
Q 047978 57 PKLGKEAVSKAIKEWGQPISKI---T----HLISCSVSG---------------------VDMP-----GADYQLTKLLG 103 (320)
Q Consensus 57 ~~la~~Aa~~aL~~ag~~~~dI---d----~li~~s~t~---------------------~~~p-----~~a~~l~~~LG 103 (320)
..++..|+++||+++|++++.+ + .|++++... +..| ..+.+|+..+|
T Consensus 200 ~~~al~Aa~eAL~dAGl~~~~~~~~~~~r~GV~vGt~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~~g 279 (540)
T PLN02787 200 MLYLLTAGKKALADGGITEDVMKELDKTKCGVLIGSAMGGMKVFNDAIEALRISYRKMNPFCVPFATTNMGSAMLAMDLG 279 (540)
T ss_pred HHHHHHHHHHHHHHcCCCcccccccCCCceEEEEEeccchHHHHHHHHHHHhhccccCCcchhhhhcccHHHHHHHHHhC
Confidence 4678999999999999876422 1 355555432 0011 13567888899
Q ss_pred CCcc------hhhhhhh--------hhcCCCCeEEEEEeeccccc-----------c----------cCCCCCCchhhhh
Q 047978 104 LKPS------VKRVMLT--------AESNAGARVLVVCSEITVGT-----------F----------RAPSDENLSCLVN 148 (320)
Q Consensus 104 l~~~------~c~~~l~--------l~~~~~~~~LVv~~e~~s~~-----------~----------~~~~~~~~~~~~~ 148 (320)
++.. .|++.++ |++|..+.+||.++|..... + ..|-|. .-.
T Consensus 280 l~Gp~~tistACASs~~Ai~~A~~~Ir~G~aD~aLvGG~d~~l~p~~~~~f~~~~aLS~~~~~p~~~~rPFD~----~rd 355 (540)
T PLN02787 280 WMGPNYSISTACATSNFCILNAANHIIRGEADVMLCGGSDAAIIPIGLGGFVACRALSQRNDDPTKASRPWDM----NRD 355 (540)
T ss_pred CCCCccccccccccHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHHHHHHhhccCCCcccccCCccc----CCC
Confidence 8753 3664332 78999999999999963110 0 012221 225
Q ss_pred hhhhccCceEEEEeecCCC--CCCCCeeEEeccCceecCCCcccccccccccceechhHHHHHHHHhhhcCCCCCCCCce
Q 047978 149 RAIVGDGTAALIVGACPDI--NTERPLFHIVPTAQTILPDSEDAIKGHFRESPLIADNIDKFLAESFDQVSLNDHDWNSL 226 (320)
Q Consensus 149 ~~~~GDgAaA~ll~~~~~~--~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~i~~~l~~~g~~~~d~~~~ 226 (320)
++++|+||+++||++.+.. .-...+-++...+... +... + .....+| ..+...++.+|+++|++++|| .
T Consensus 356 Gfv~GEGAa~lVLE~~e~A~~rGa~IyA~I~G~g~s~--Da~~-~-t~p~p~g---~g~~~am~~AL~~AGl~p~dI--d 426 (540)
T PLN02787 356 GFVMGEGAGVLLLEELEHAKKRGANIYAEFLGGSFTC--DAYH-M-TEPHPEG---AGVILCIEKALAQSGVSKEDV--N 426 (540)
T ss_pred CcccccceEEEEEeeHHHHHHCCCeeEEEEEEEEEec--CCCC-C-CCCCcCH---HHHHHHHHHHHHHcCCCHHHC--c
Confidence 8899999999999976542 1011122333321110 0000 0 0011222 445678999999999999996 3
Q ss_pred EEEEcCCChhHHH-----HHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCC------------
Q 047978 227 FWMMHPIGPAVLD-----QIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATT------------ 289 (320)
Q Consensus 227 ~~i~h~~~~~~~~-----~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~------------ 289 (320)
++-.|-.+...-| .+.+.++-.+.-...+ +-..+||+.+|+=.+.+...+.. +++|.+.|
T Consensus 427 yInaHGTGT~~gD~~E~~Ai~~~Fg~~~~~pV~S--~Ks~iGH~~gAAGa~eli~~~la-l~~g~iPPt~n~~~pd~~~~ 503 (540)
T PLN02787 427 YINAHATSTKAGDLKEYQALMRCFGQNPELRVNS--TKSMIGHLLGAAGAVEAIATVQA-IRTGWVHPNINLENPESGVD 503 (540)
T ss_pred EEEccCccCCCCCHHHHHHHHHHhCCCCCceeeC--CCCCcCCCcccchHHHHHHHHHH-HhcCCcCCCCCCCCCCccCC
Confidence 8889987654433 3445565322111222 34568999888765555443321 11133321
Q ss_pred -----C-----CCCceEEEEeeccchhhhheeeee
Q 047978 290 -----G-----EELEWGVLLGFEAGLTVEAIVLRS 314 (320)
Q Consensus 290 -----G-----~~~d~vll~~~G~G~~~~a~~l~~ 314 (320)
+ ...+.+|.-+||-|..-++++|+.
T Consensus 504 ~~~~v~~~~~~~~ir~aL~nSfGFGG~Naslvl~~ 538 (540)
T PLN02787 504 TKVLVGPKKERLDIKVALSNSFGFGGHNSSILFAP 538 (540)
T ss_pred cccccccccccCCcCEEEEeeecCCceeEEEEEEe
Confidence 0 011456778899888888888864
No 113
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=98.50 E-value=4.9e-06 Score=78.95 Aligned_cols=81 Identities=12% Similarity=0.046 Sum_probs=63.0
Q ss_pred ccchHHHHHHHHHHHHHH-cCCCCCCcCEEEEEeeCC-CC-CCCHHHHHHHHcCCCcc--------hhhhhhh-------
Q 047978 53 VPKVPKLGKEAVSKAIKE-WGQPISKITHLISCSVSG-VD-MPGADYQLTKLLGLKPS--------VKRVMLT------- 114 (320)
Q Consensus 53 ~e~~~~la~~Aa~~aL~~-ag~~~~dId~li~~s~t~-~~-~p~~a~~l~~~LGl~~~--------~c~~~l~------- 114 (320)
+.+..+|+..+++++|++ +|+++++||.+|+++..+ .. .+..+..+...+|++.. .|++-+.
T Consensus 24 ~~~~~~L~~~~~~~al~~~agl~~~~Id~vi~g~~~~~~~~g~~~ar~~~~~~Gl~~~~p~~~V~~~caSG~~Ai~~A~~ 103 (387)
T PRK08947 24 NVRAEDLSAHLMRSLLARNPALDPAEIDDIIWGCVQQTLEQGFNIARNAALLAGIPHSVPAVTVNRLCGSSMQALHDAAR 103 (387)
T ss_pred CCCHHHHHHHHHHHHHHhccCcChHHhCeEEEEeccccccccccHHHHHHHHcCCCCCCcceeeechhHHHHHHHHHHHH
Confidence 667799999999999997 699999999999997755 22 24456668888999742 2643211
Q ss_pred -hhcCCCCeEEEEEeecccc
Q 047978 115 -AESNAGARVLVVCSEITVG 133 (320)
Q Consensus 115 -l~~~~~~~~LVv~~e~~s~ 133 (320)
+++|..+.+||++.|..|.
T Consensus 104 ~I~sG~~d~vlv~G~E~ms~ 123 (387)
T PRK08947 104 AIMTGDGDVFLIGGVEHMGH 123 (387)
T ss_pred HHHCCCCCEEEEcccccccc
Confidence 7889999999999998763
No 114
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=98.48 E-value=1.1e-05 Score=76.47 Aligned_cols=81 Identities=11% Similarity=-0.004 Sum_probs=60.2
Q ss_pred ccchHHHHHHHHHHHHHH-cCCCCCCcCEEEEEeeCC-CC-CCCHHHHHHHHcCCCcc--------hhhh-hhh------
Q 047978 53 VPKVPKLGKEAVSKAIKE-WGQPISKITHLISCSVSG-VD-MPGADYQLTKLLGLKPS--------VKRV-MLT------ 114 (320)
Q Consensus 53 ~e~~~~la~~Aa~~aL~~-ag~~~~dId~li~~s~t~-~~-~p~~a~~l~~~LGl~~~--------~c~~-~l~------ 114 (320)
+.++.+|+..|++++|++ +|++|++||.+++++... .. .+..+..+.-..|++.. .|++ +..
T Consensus 22 ~~~~~~L~~~a~~~al~~~agl~~~~Id~v~~G~~~~~~~~g~~~ar~~~~~~g~~~~~p~~tV~~~CaSG~~Ai~~Aa~ 101 (385)
T TIGR02445 22 NTRAEDLSAHLMSKLLARNPKVDPAEVEDIYWGCVQQTLEQGFNIARNAALLAQIPHTSAAVTVNRLCGSSMQALHDAAR 101 (385)
T ss_pred CCCHHHHHHHHHHHHHHhccCCCHHHcCEEEEecccccccccchHHHHHHHHCCCCCCcchhhhhhhhHHHHHHHHHHHH
Confidence 667889999999999997 599999999999998754 21 23345555556776652 2643 211
Q ss_pred -hhcCCCCeEEEEEeecccc
Q 047978 115 -AESNAGARVLVVCSEITVG 133 (320)
Q Consensus 115 -l~~~~~~~~LVv~~e~~s~ 133 (320)
+++|..+.+|+++.|..|.
T Consensus 102 ~I~sG~~d~vlagG~E~ms~ 121 (385)
T TIGR02445 102 AIMTGDADVCLVGGVEHMGH 121 (385)
T ss_pred HHHCCCCCEEEEeeehhccc
Confidence 7889999999999998763
No 115
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=98.45 E-value=5.5e-07 Score=86.50 Aligned_cols=81 Identities=11% Similarity=-0.063 Sum_probs=67.2
Q ss_pred ccchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCC-CCCCCHHHHHHHHcCCCc-c-------hhhhhhh--------h
Q 047978 53 VPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSG-VDMPGADYQLTKLLGLKP-S-------VKRVMLT--------A 115 (320)
Q Consensus 53 ~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~-~~~p~~a~~l~~~LGl~~-~-------~c~~~l~--------l 115 (320)
+.++.+|+.+|++++|+++|++++|||.||++++++ ...+..+..++..+|++. . .|+++++ +
T Consensus 24 ~~~~~~L~~~A~~~Al~dAgl~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~p~~~v~~~CaSg~~al~~A~~~I 103 (426)
T PRK08170 24 PFSASDLAVAAGRALLNRQPFAPDDLDEVILGCAMPSPDEANIARVVALRLGCGEKVPAWTVQRNCASGMQALDSAAANI 103 (426)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcChHHHHHHHHhCcCCCceeeeccchhhHHHHHHHHHHHHH
Confidence 468899999999999999999999999999988876 334567788999999963 1 2766543 7
Q ss_pred hcCCCCeEEEEEeecccc
Q 047978 116 ESNAGARVLVVCSEITVG 133 (320)
Q Consensus 116 ~~~~~~~~LVv~~e~~s~ 133 (320)
++|..+++||+++|..|.
T Consensus 104 ~sG~~d~vLv~G~E~ms~ 121 (426)
T PRK08170 104 ALGRADLVLAGGVEAMSH 121 (426)
T ss_pred HCCCCCEEEEEEEecccC
Confidence 889999999999997664
No 116
>PRK07855 lipid-transfer protein; Provisional
Probab=98.32 E-value=3.7e-05 Score=73.00 Aligned_cols=192 Identities=16% Similarity=0.134 Sum_probs=113.5
Q ss_pred cccchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCc-ch-------hhh---hhh-----h
Q 047978 52 LVPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKP-SV-------KRV---MLT-----A 115 (320)
Q Consensus 52 ~~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~-~~-------c~~---~l~-----l 115 (320)
++.+..+|+.+|+++||+++|++++|||.+++.+. ...+. ..+++.||+++ .. |++ .+. +
T Consensus 20 ~~~~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~--~~~~~--~~l~~~lGl~~~~~~~~v~~gg~sg~~~~~~A~~~I 95 (386)
T PRK07855 20 SGRSELRLACEAVLAALDDAGLAPSDVDGLVTFTM--DTNPE--IAVARALGIGELKFFSRIHYGGGAACATVQQAAMAV 95 (386)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecC--ccccH--HHHHHHCCCCCCcceeeecCCcHHHHHHHHHHHHHH
Confidence 46678999999999999999999999999986332 22222 56889999965 21 221 122 7
Q ss_pred hcCCCCeEEEEEe--eccccc--------------------ccCCCCC-C------------------------------
Q 047978 116 ESNAGARVLVVCS--EITVGT--------------------FRAPSDE-N------------------------------ 142 (320)
Q Consensus 116 ~~~~~~~~LVv~~--e~~s~~--------------------~~~~~~~-~------------------------------ 142 (320)
++|..+.|||++. +..... +..|..- .
T Consensus 96 ~sG~~d~vLv~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~al~a~~ym~~~G~t~e~lA~vavk~ 175 (386)
T PRK07855 96 ATGVADVVVCYRAFNERSGMRFGQGQTGLAENPTSTGVDYGWSYPHGLLTPAAWVAMLARRYMHEYGATSEDFGRVAVAD 175 (386)
T ss_pred HCCCCCEEEEEeecccccccccccccccccccccccccchhhhhhcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 8999999999987 321000 0000000 0
Q ss_pred ------------------chh------------hhhhhhhccCceEEEEeecCCC-CCCCCeeEEeccCceecCCCcccc
Q 047978 143 ------------------LSC------------LVNRAIVGDGTAALIVGACPDI-NTERPLFHIVPTAQTILPDSEDAI 191 (320)
Q Consensus 143 ------------------~~~------------~~~~~~~GDgAaA~ll~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~ 191 (320)
.++ +..++..+|||+|+||.+++.. ........+...+....|.... .
T Consensus 176 ~~~A~~NP~A~~~~~~~t~e~vl~s~~Ia~Pl~~~d~~~~sDGAaAvvl~see~A~~l~~~pv~I~g~~~~~~~~~~~-~ 254 (386)
T PRK07855 176 RKHAATNPKAWFYGRPITLEDHQNSRWIAEPLRLLDCCQESDGAVALVVTSAERARDLKQRPAVIKAAAQGSGADQYM-M 254 (386)
T ss_pred HHHHhcChHhhhcCCCCCHHHHhcCCcccCCchhhhcCCcCCceEEEEEecHHHHhhCCCCCEEEEEEEEecCCcccc-c
Confidence 000 1223455799999999876532 1111122443332222222100 0
Q ss_pred cccccccceechhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHHHHHHcCCCcc
Q 047978 192 KGHFRESPLIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKT 250 (320)
Q Consensus 192 ~~~~~~~g~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e 250 (320)
...-+.+-.........++.+++++|++++|+| .+=+|-......-...+.||+.+.
T Consensus 255 ~~~~~~d~~~~~~~~~aa~~a~~~AGi~~~DiD--v~El~D~Ft~~~l~~~E~lG~~~~ 311 (386)
T PRK07855 255 TSYYRDDITGLPEMGLVARQLWAQSGLGPADID--TAILYDHFTPFVLMQLEELGFCGR 311 (386)
T ss_pred cccccccccccchHHHHHHHHHHHcCCCHHHCc--EEEeccCCcHHHHHHHHHcCCCCC
Confidence 000000101123345788999999999999973 778888877777777888987754
No 117
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.32 E-value=1.8e-05 Score=75.84 Aligned_cols=240 Identities=14% Similarity=0.113 Sum_probs=140.3
Q ss_pred HHHHHHHHHHHHHHcCC---CCCCcCEEEEEeeCC-C-------------------------CCC-CHHHHHHHHcCCCc
Q 047978 57 PKLGKEAVSKAIKEWGQ---PISKITHLISCSVSG-V-------------------------DMP-GADYQLTKLLGLKP 106 (320)
Q Consensus 57 ~~la~~Aa~~aL~~ag~---~~~dId~li~~s~t~-~-------------------------~~p-~~a~~l~~~LGl~~ 106 (320)
..|+..|+++||+++|+ +++++..++ ++... . .+| ..+.++...+|++.
T Consensus 84 ~~~~l~aa~~AledAg~~~~~~~r~Gv~~-G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~~G 162 (418)
T PRK07910 84 QRMSTVLGRRVWENAGSPEVDTNRLMVSI-GTGLGSAEELVFAYDDMRARGLRAVSPLAVQMYMPNGPAAAVGLERHAKA 162 (418)
T ss_pred HHHHHHHHHHHHHHcCCCCCCcccEEEEE-EEccCccHhHHHHHHHHHhcCcccCChhHHHHhccccHHHHHHHHhCCCC
Confidence 45789999999999996 556666444 44321 1 112 24567777788764
Q ss_pred c------hhhhhhh--------hhcCCCCeEEEEEeeccccc-----c------cC-----CCCC--Cchhhhhhhhhcc
Q 047978 107 S------VKRVMLT--------AESNAGARVLVVCSEITVGT-----F------RA-----PSDE--NLSCLVNRAIVGD 154 (320)
Q Consensus 107 ~------~c~~~l~--------l~~~~~~~~LVv~~e~~s~~-----~------~~-----~~~~--~~~~~~~~~~~GD 154 (320)
. .|++.+. |++|..+.+||.++|..... | .. |+.. .-+..-.++++|+
T Consensus 163 ~~~ti~taCaS~~~Al~~A~~~I~~G~~d~aivgg~~~~~~~~~~~~f~~~~~~ls~~~~~~~~~~rPFd~~~~G~v~gE 242 (418)
T PRK07910 163 GVITPVSACASGSEAIAQAWRQIVLGEADIAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFDKDRDGFVFGE 242 (418)
T ss_pred CcccccchhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCccccCCCCCCCCcCCCcCCCCCEeeec
Confidence 2 3665432 78999999999999874210 0 11 1110 0011235889999
Q ss_pred CceEEEEeecCCCC-C-CCCeeEEeccCceecCCCcccccccccccceechhHHHHHHHHhhhcCCCCCCCCceEEEEcC
Q 047978 155 GTAALIVGACPDIN-T-ERPLFHIVPTAQTILPDSEDAIKGHFRESPLIADNIDKFLAESFDQVSLNDHDWNSLFWMMHP 232 (320)
Q Consensus 155 gAaA~ll~~~~~~~-~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~ 232 (320)
|++++||++.+... . .....++...+... +.... ...... .....++++.+|+++|++++|+ .++-.|-
T Consensus 243 Gaa~vvLe~~~~A~~rg~~i~a~i~g~~~~~--dg~~~--~~~~~~---~~~~~~a~~~Al~~agi~~~di--d~ie~hg 313 (418)
T PRK07910 243 GGALMVIETEEHAKARGANILARIMGASITS--DGFHM--VAPDPN---GERAGHAMTRAIELAGLTPGDI--DHVNAHA 313 (418)
T ss_pred eEEEEEEeeHHHHHhCCCcEEEEEEEEEEec--CCCCC--CCCCCC---HHHHHHHHHHHHHHhCCCHHHC--CEEEcCC
Confidence 99999999865421 0 11222333321111 00000 001111 2345678999999999999986 3888998
Q ss_pred CChhHH-----HHHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHH---HHhchhcCCCC----------------
Q 047978 233 IGPAVL-----DQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEM---RKRSVEEGKAT---------------- 288 (320)
Q Consensus 233 ~~~~~~-----~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~---~~~~~~~g~l~---------------- 288 (320)
.+.+.- +.+.+.+|-..-.+. + .-..+||+.+|+=.+.|... +++ |.+.
T Consensus 314 tgt~~~D~~E~~Al~~~fg~~~~~v~-s--~K~~~GH~~~AaG~~~li~~~l~l~~----~~ipp~~n~~~~~p~~~l~~ 386 (418)
T PRK07910 314 TGTSVGDVAEGKAINNALGGHRPAVY-A--PKSALGHSVGAVGAVESILTVLALRD----GVIPPTLNLENLDPEIDLDV 386 (418)
T ss_pred cCCCCCCHHHHHHHHHHhCCCCCcee-C--ccccccccHHHHHHHHHHHHHHHHhc----CccCCCCCCCCCCCCCCccc
Confidence 775443 334556663211122 2 35668999988877665443 333 3321
Q ss_pred ------CCCCCceEEEEeeccchhhhheeeee
Q 047978 289 ------TGEELEWGVLLGFEAGLTVEAIVLRS 314 (320)
Q Consensus 289 ------~G~~~d~vll~~~G~G~~~~a~~l~~ 314 (320)
++ ..++++.-+||-|.+-.+++++.
T Consensus 387 ~~~~~~~~-~~~~al~nsfGfGG~N~slvl~~ 417 (418)
T PRK07910 387 VAGEPRPG-NYRYAINNSFGFGGHNVALAFGR 417 (418)
T ss_pred CCCCCcCC-CccEEEEeeecCCCeeEEEEEec
Confidence 11 11567888999999888888874
No 118
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=98.28 E-value=2.3e-06 Score=81.38 Aligned_cols=81 Identities=14% Similarity=0.051 Sum_probs=65.9
Q ss_pred ccchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCC-CCCCCHHH-HHHHHcCCCcc-------hhhhhhh--------h
Q 047978 53 VPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSG-VDMPGADY-QLTKLLGLKPS-------VKRVMLT--------A 115 (320)
Q Consensus 53 ~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~-~~~p~~a~-~l~~~LGl~~~-------~c~~~l~--------l 115 (320)
.+.+.+|+.+|++++|++++++|+|||.||+++.++ +..+..+. .+++.+|+.+. .|+++++ +
T Consensus 20 ~~~~~el~~~a~~~Al~~agl~p~dID~vi~g~~~~~~~g~~~~~~~~~~~lg~~~~p~~~V~~~Casg~~al~~A~~~I 99 (393)
T cd00826 20 NDLAHEAGAKAIAAALEPAGVAAGAVEEACLGQVLGAGEGQNCAQQAAMHAGGLQEAPAIGMNNLCGSGLRALALAMQLI 99 (393)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEccCCcccCcHHHHHHHHcCCCCCCcEEEecchhHHHHHHHHHHHHHH
Confidence 467799999999999999999999999999998887 44455554 47888888653 2766554 7
Q ss_pred hcCCCCeEEEEEeecccc
Q 047978 116 ESNAGARVLVVCSEITVG 133 (320)
Q Consensus 116 ~~~~~~~~LVv~~e~~s~ 133 (320)
++|..+.+||+++|..|.
T Consensus 100 ~sG~~~~vlv~g~e~~s~ 117 (393)
T cd00826 100 AGGDANCILAGGFEKMET 117 (393)
T ss_pred HCCCCCEEEEEeeecccc
Confidence 889999999999998763
No 119
>PRK07937 lipid-transfer protein; Provisional
Probab=98.19 E-value=6.2e-05 Score=70.49 Aligned_cols=228 Identities=16% Similarity=0.059 Sum_probs=127.4
Q ss_pred cch-HHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCC-CCHHHHHHHHcCCCcc---h--hh-h---hhh----hhcC
Q 047978 54 PKV-PKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDM-PGADYQLTKLLGLKPS---V--KR-V---MLT----AESN 118 (320)
Q Consensus 54 e~~-~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~-p~~a~~l~~~LGl~~~---~--c~-~---~l~----l~~~ 118 (320)
.+. .+|+.+|+++||+++|++++|||.++.++...+.. ......+...+|+.+. . ++ + +.. +++|
T Consensus 21 ~~~~~el~~eA~~~Al~DAgl~~~dID~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~v~~~g~~a~~~A~~aI~sG 100 (352)
T PRK07937 21 TTNGVEMLMPCFAELYAELGITKSDIGFWCSGSSDYLAGRAFSFISAIDSIGAVPPINESHVEMDAAWALYEAWVKLLTG 100 (352)
T ss_pred CCcHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccccccccccchhhHHhhccCCCCCceEEecCcHHHHHHHHHHHHhcC
Confidence 444 79999999999999999999999885432211211 1122345566787431 1 11 1 111 8899
Q ss_pred CCCeEEEEEeeccccc-------------ccCCCCCC-------------------------------------------
Q 047978 119 AGARVLVVCSEITVGT-------------FRAPSDEN------------------------------------------- 142 (320)
Q Consensus 119 ~~~~~LVv~~e~~s~~-------------~~~~~~~~------------------------------------------- 142 (320)
..++|||++.|+.+.. +..|....
T Consensus 101 ~~d~VLv~g~~k~~~~~~~~~~~~~~~~~~~~p~G~~~~~~~Al~a~~ym~~yG~t~e~lA~vavk~r~nA~~NP~A~~r 180 (352)
T PRK07937 101 EVDTALVYGFGKSSAGTLRRVLALQLDPYTVAPLWPDSVSMAGLQARAGLDAGKWTEEQMAEVAARSRADARRNPSAEPS 180 (352)
T ss_pred CCCEEEEEEecccCccchhhhhhccCCcceeccCCCchHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhhCchhhcc
Confidence 9999999999865310 00011000
Q ss_pred --chh------------hhhhhhhccCceEEEEeecCCC-CC-CCCeeEEeccCceecCCCcccccccccccceechhHH
Q 047978 143 --LSC------------LVNRAIVGDGTAALIVGACPDI-NT-ERPLFHIVPTAQTILPDSEDAIKGHFRESPLIADNID 206 (320)
Q Consensus 143 --~~~------------~~~~~~~GDgAaA~ll~~~~~~-~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~ 206 (320)
.++ +..++..+|||+|+||.+++.. .. .++ ..+.+.+....+.... .+. + . -.
T Consensus 181 it~edvl~s~~ia~PL~l~d~~~~~DGAaA~vl~s~~~A~~l~~~p-v~I~g~~~~~~~~~~~-----~~d--~--~-~~ 249 (352)
T PRK07937 181 ISVDELLARPYFADPLRRHDIAPITDGAAAVVLAAGDRARELRERP-AWITGIEHRIESPSLG-----ARD--L--T-RS 249 (352)
T ss_pred CCHHHHhcCCcccCCchhhcCCCCCCcceEEEEecHHHHHHcCCCc-EEEEEEEEeeCCcccc-----ccc--c--c-cH
Confidence 000 1223455899999999876532 11 122 3343332221111100 000 0 0 01
Q ss_pred HHHHHHhhh-cCCCCCCCCceEEEEcCCChhHHHHHHHHcCCCcc-hhhhhHHHHhccCCcccchHHHHHHHHHHhchhc
Q 047978 207 KFLAESFDQ-VSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKT-KLRETRHVLSEYGNMASATVLFVLDEMRKRSVEE 284 (320)
Q Consensus 207 ~~i~~~l~~-~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e-~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~ 284 (320)
..++.++++ +|++++|+| .+=+|-......-...+.||+..+ .+-.+=-.+ -||-..++=+..+.++..+...
T Consensus 250 ~~~~~a~~~aAgi~~~diD--~~Ei~D~F~~~~l~~~e~lGl~g~~pvN~~GG~l--~ghp~gatG~~~~~e~~~QL~g- 324 (352)
T PRK07937 250 PSTALAAEAATGGDAGGVD--VAELHAPFTHQELILREALGLGDKTKVNPSGGAL--AANPMFAAGLERIGEAARHIWD- 324 (352)
T ss_pred HHHHHHHHHhcCCCHHHCC--EEEEeCCChHHHHHHHHHcCCCCCCCcCCCccch--hcCchhHHHHHHHHHHHHHHhc-
Confidence 223344555 599999973 788888887777778899998532 222210113 2777766777778777776331
Q ss_pred CCCCCCCCCceEEEEeecc
Q 047978 285 GKATTGEELEWGVLLGFEA 303 (320)
Q Consensus 285 g~l~~G~~~d~vll~~~G~ 303 (320)
+ .. ++.|..+.|.
T Consensus 325 -~--~a---~~~l~~~~Gg 337 (352)
T PRK07937 325 -G--SA---RRALAHATSG 337 (352)
T ss_pred -c--CC---CEEEEecccc
Confidence 1 12 6677777664
No 120
>PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=98.19 E-value=5.2e-05 Score=72.42 Aligned_cols=237 Identities=17% Similarity=0.099 Sum_probs=135.8
Q ss_pred hHHHHHHHHHHHHHHcCCCCCC-----cCEEEEEeeCC-C--------------------------CCC-CHHHHHHHHc
Q 047978 56 VPKLGKEAVSKAIKEWGQPISK-----ITHLISCSVSG-V--------------------------DMP-GADYQLTKLL 102 (320)
Q Consensus 56 ~~~la~~Aa~~aL~~ag~~~~d-----Id~li~~s~t~-~--------------------------~~p-~~a~~l~~~L 102 (320)
...|+..|+++||+++|+++++ +. +++++..+ . .+| ..+.+|+..+
T Consensus 71 ~~~~a~~aa~~Al~dAGl~~~~~~~~rvG-v~~gs~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~ 149 (406)
T PRK07967 71 ASAYAYLAMEQAIADAGLSEEQVSNPRTG-LIAGSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVSACLATPF 149 (406)
T ss_pred HHHHHHHHHHHHHHHcCCCCccCCCCCEE-EEEecCCccHHHHHHHHHHHHhccCcccCCchhhcccccchHHHHHHHHH
Confidence 4568999999999999987543 44 34444211 0 111 2567899999
Q ss_pred CCCcc------hhhhhhh--------hhcCCCCeEEEEEeeccccc----c-----c------CCCC--CCchhhhhhhh
Q 047978 103 GLKPS------VKRVMLT--------AESNAGARVLVVCSEITVGT----F-----R------APSD--ENLSCLVNRAI 151 (320)
Q Consensus 103 Gl~~~------~c~~~l~--------l~~~~~~~~LVv~~e~~s~~----~-----~------~~~~--~~~~~~~~~~~ 151 (320)
|++.. .|++.+. |++|..+.+||.++|..+.. | . +|+. +..+..-.+++
T Consensus 150 ~l~Gp~~tvs~aCas~~~Ai~~A~~~ir~G~~d~~lvgg~d~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~r~G~v 229 (406)
T PRK07967 150 KIKGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELDWEMSCLFDAMGALSTKYNDTPEKASRAYDANRDGFV 229 (406)
T ss_pred CCCCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEeeecccChHHHHHHHHhhhhccCCCCCCCcCCcCCcCCCCcee
Confidence 98863 3665332 78999999999999865321 0 0 0100 00011224789
Q ss_pred hccCceEEEEeecCCC--CCCCCeeEEeccCceecCCCcccccccccccceechhHHHHHHHHhhhcCCCCCCCCceEEE
Q 047978 152 VGDGTAALIVGACPDI--NTERPLFHIVPTAQTILPDSEDAIKGHFRESPLIADNIDKFLAESFDQVSLNDHDWNSLFWM 229 (320)
Q Consensus 152 ~GDgAaA~ll~~~~~~--~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i 229 (320)
.|+||+++||++.+.. .-.+.+-++...+... +... ...++ .+...++++.+|+..+ + || +++-
T Consensus 230 ~gEGaa~lvLe~~~~A~~rga~i~a~i~G~g~~~--d~~~----~~~p~---~~~~~~a~~~Al~~~~--~-~I--dyi~ 295 (406)
T PRK07967 230 IAGGGGVVVVEELEHALARGAKIYAEIVGYGATS--DGYD----MVAPS---GEGAVRCMQMALATVD--T-PI--DYIN 295 (406)
T ss_pred eeceEEEEEEeeHHHHHhCCCcEEEEEEEEEECC--CCCC----CCCCC---HHHHHHHHHHHHhCCC--C-Cc--cEEE
Confidence 9999999999986542 1011122343322111 1000 01122 2455677888887654 3 65 3888
Q ss_pred EcCCChhHHH-----HHHHHcCCCcchh-hhhHHHHhccCCcccchHHHHHHHH---HHhchhcCCCCC---------CC
Q 047978 230 MHPIGPAVLD-----QIEGKLGLEKTKL-RETRHVLSEYGNMASATVLFVLDEM---RKRSVEEGKATT---------GE 291 (320)
Q Consensus 230 ~h~~~~~~~~-----~~~~~lg~~~e~~-~~~~~~~~~~Gn~~sasi~~~L~~~---~~~~~~~g~l~~---------G~ 291 (320)
.|-.+.+.-| .+.+.+|-. .. ..+ +-..+||+.+|+=.+.+... +++ +.+.| ..
T Consensus 296 aHgtGT~~~D~~E~~Ai~~~fg~~--~~~v~s--~K~~~GH~~~AaG~~e~i~~~lal~~----~~iPpt~~~~~~~~~~ 367 (406)
T PRK07967 296 THGTSTPVGDVKELGAIREVFGDK--SPAISA--TKSLTGHSLGAAGVQEAIYSLLMMEH----GFIAPSANIEELDPQA 367 (406)
T ss_pred cCCCCCCCCCHHHHHHHHHHhCCC--CCeeEC--cccccccCccccchHHHHHHHHHHhc----CcCCCCCCCCCCCccc
Confidence 9987654433 344556521 11 222 34568999988776655333 333 33211 00
Q ss_pred -------------CCceEEEEeeccchhhhheeeeec
Q 047978 292 -------------ELEWGVLLGFEAGLTVEAIVLRSI 315 (320)
Q Consensus 292 -------------~~d~vll~~~G~G~~~~a~~l~~~ 315 (320)
..++++.-+||-|..-.+++++..
T Consensus 368 ~~~~~~~~~~~~~~~~~~l~~sfgfGG~n~~lvl~~~ 404 (406)
T PRK07967 368 AGMPIVTETTDNAELTTVMSNSFGFGGTNATLVFRRY 404 (406)
T ss_pred cCCCccCCCCcCCCCCEEEEecccCCCeeEEEEEEec
Confidence 115688889999988888888753
No 121
>PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B ....
Probab=97.99 E-value=1.5e-05 Score=71.61 Aligned_cols=82 Identities=22% Similarity=0.072 Sum_probs=64.9
Q ss_pred cccchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCC-CCCCCHHHHHHHHcCCCcc--------hhhhhhh--------
Q 047978 52 LVPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSG-VDMPGADYQLTKLLGLKPS--------VKRVMLT-------- 114 (320)
Q Consensus 52 ~~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~-~~~p~~a~~l~~~LGl~~~--------~c~~~l~-------- 114 (320)
.+.++.+|+..|++++|++++++|++||.|++++..+ ...+..+..+.-..|++.. .|++-+.
T Consensus 22 ~~~~~~~L~~~a~~~al~~~~i~~~~Id~v~~G~~~~~~~g~~~ar~~~l~aGl~~~vp~~~V~~~CaSG~~Av~~a~~~ 101 (264)
T PF00108_consen 22 ADVSPEDLAAEAVKAALERAGIDPEDIDAVIVGNVLQEGEGQNIARQAALAAGLPESVPATTVNRACASGLQAVHLAAMA 101 (264)
T ss_dssp TTS-HHHHHHHHHHHHHHHHTSHGGGEEEEEEE-SSSCTTTCHHHHHHHHHTTS-TTSEEEEEE-GGGHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHhcccchhhhhhcCcccccccccchhhhhhhhhhcccccccceeeehhhhhHHHHHHHHhhhh
Confidence 3778999999999999999999999999999999988 4556667777788898754 2653211
Q ss_pred hhcCCCCeEEEEEeecccc
Q 047978 115 AESNAGARVLVVCSEITVG 133 (320)
Q Consensus 115 l~~~~~~~~LVv~~e~~s~ 133 (320)
+++|..+.+|+++.|..|.
T Consensus 102 I~sG~~dvvlagGvE~mS~ 120 (264)
T PF00108_consen 102 IASGEADVVLAGGVESMSR 120 (264)
T ss_dssp HHTTS-SEEEEEEEEETTT
T ss_pred hcCCCccEEEEeccccccc
Confidence 7899999999999999986
No 122
>PF08540 HMG_CoA_synt_C: Hydroxymethylglutaryl-coenzyme A synthase C terminal; InterPro: IPR013746 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase. Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the C-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1TXT_D 1TVZ_A 1X9E_B 2HDB_B 3V4X_A 3V4N_C 2P8U_A 2FA0_A 2F9A_A 2F82_A ....
Probab=97.93 E-value=1.4e-05 Score=71.94 Aligned_cols=109 Identities=18% Similarity=0.199 Sum_probs=67.5
Q ss_pred chhHHHHHHHHhhhc---------CCCCCCCCceEEEEcCCChhHHHHHHHHcC-------------------------C
Q 047978 202 ADNIDKFLAESFDQV---------SLNDHDWNSLFWMMHPIGPAVLDQIEGKLG-------------------------L 247 (320)
Q Consensus 202 ~~~~~~~i~~~l~~~---------g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg-------------------------~ 247 (320)
.+.+..+.+...++. +...+|+ +++++|.|..++.++....|- +
T Consensus 40 l~ald~~y~~y~~k~~~~~~~~~~~~~l~~~--d~~~fH~Py~klv~Ka~~rl~~~D~~~~~~~~~~~~~~~~l~~~~~~ 117 (282)
T PF08540_consen 40 LDALDKCYKRYKEKVEKLANRGNKGTSLDDF--DYVCFHSPYCKLVQKAFARLLYNDFLRNPSSEEFEEIDAELAPFRDL 117 (282)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSST--GGG---SEEEE--SSHHHHHHHHHHHHHHHHHHTTTCHHHHHHHCCHGGGTT-
T ss_pred HHHHHHHHHHHHHHHHhhhcccCCCCCcccc--ceEEEecCchHHHHHHHHHHHHhhhhhccccccccccchhhhhhccC
Confidence 344555555555553 5666675 399999999888765433220 1
Q ss_pred Cc----------------------chhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCCCCCCceEEEEeeccch
Q 047978 248 EK----------------------TKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGL 305 (320)
Q Consensus 248 ~~----------------------e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~ 305 (320)
+. +|+..+...-++.||+.+||++++|+.++.+.. +..-.| ++|+|+|+|+|+
T Consensus 118 ~~~~s~~dr~lek~~~~~s~~~~~~kv~psl~~~~~vGN~YTaSly~~L~SlL~~~~--~~~l~G---krI~~FSYGSG~ 192 (282)
T PF08540_consen 118 PLEESYFDRDLEKAFMKASKEDFERKVEPSLLYSRQVGNMYTASLYLGLASLLSSAE--ADDLAG---KRIGMFSYGSGL 192 (282)
T ss_dssp -GGGHCTHHHHHHHHHHHHHHHHHHHCHHHTHHHHHHB--GGGHHHHHHHHHHHHHH--SCHHTT----EEEEEEEETTT
T ss_pred CcccccccHHHHHHHHHHHHHHHHHHHhHHHHHHHHcCceehHHHHHHHHHHhhccC--ccccCC---CEEEEEEecCCc
Confidence 11 133334345678899999999999999994321 334468 999999999999
Q ss_pred hhhheeeeeccC
Q 047978 306 TVEAIVLRSIPM 317 (320)
Q Consensus 306 ~~~a~~l~~~~~ 317 (320)
..+...+++.|-
T Consensus 193 ~s~~fs~~v~~~ 204 (282)
T PF08540_consen 193 ASEFFSGRVQPG 204 (282)
T ss_dssp EEEEEEEEE-TT
T ss_pred ceeEEEEEEeCC
Confidence 999999888764
No 123
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=97.57 E-value=0.0025 Score=73.06 Aligned_cols=210 Identities=11% Similarity=0.069 Sum_probs=119.9
Q ss_pred HHHHHHHHcCCCcc------hhhhhhh--------hhcCCCCeEEEEEeeccccc----------ccCCCCC--Cchhhh
Q 047978 94 ADYQLTKLLGLKPS------VKRVMLT--------AESNAGARVLVVCSEITVGT----------FRAPSDE--NLSCLV 147 (320)
Q Consensus 94 ~a~~l~~~LGl~~~------~c~~~l~--------l~~~~~~~~LVv~~e~~s~~----------~~~~~~~--~~~~~~ 147 (320)
.+.+|...||++.. .|++.+. |++|.++.+|+-+++..... ...++.. ..+...
T Consensus 185 ~A~RIS~~f~L~Gps~tVdtACsSSL~Al~~A~~~L~~G~~D~alvGGv~~~~~p~~~~~fs~~~~lS~~g~crpFD~~a 264 (2582)
T TIGR02813 185 ISGRIANRFDLGGMNCVVDAACAGSLAAIRMALSELLEGRSEMMITGGVCTDNSPFMYMSFSKTPAFTTNEDIQPFDIDS 264 (2582)
T ss_pred HHHHHHHHhCCCCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecceeeCCHHHHHHHHhccCcCCCCCccCCCCCC
Confidence 46788899998764 3765432 78899999999887763210 1111110 011223
Q ss_pred hhhhhccCceEEEEeecCCC-CCCCCeeE-EeccCceecCCCcccccccc-cccceechhHHHHHHHHhhhcCCCCCCCC
Q 047978 148 NRAIVGDGTAALIVGACPDI-NTERPLFH-IVPTAQTILPDSEDAIKGHF-RESPLIADNIDKFLAESFDQVSLNDHDWN 224 (320)
Q Consensus 148 ~~~~~GDgAaA~ll~~~~~~-~~~~~~~~-~~~~~~~~~p~~~~~~~~~~-~~~g~~~~~~~~~i~~~l~~~g~~~~d~~ 224 (320)
.++++|+|++++||.+-... ..+...+. +.+.+.. -+... ..+ .++ .....++++++++++|++++||
T Consensus 265 dG~v~GEGag~vvLkrL~dA~~dGd~IyAvI~G~g~~--~DG~~---~~itaP~---~~gq~~~i~~Al~~Agi~p~~I- 335 (2582)
T TIGR02813 265 KGMMIGEGIGMMALKRLEDAERDGDRIYAVIKGVGAS--SDGKF---KSIYAPR---PEGQAKALKRAYDDAGFAPHTC- 335 (2582)
T ss_pred CcccccceEEEEEeCcHHHHHhCCCcEEEEEEEEEEc--CCCCC---CCCcCCC---HHHHHHHHHHHHHHcCCCHHHC-
Confidence 58899999999999976543 11112222 2221111 01100 011 111 2334678999999999999986
Q ss_pred ceEEEEcCCChhHH-----HHHHHHcCCCc---chhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCC-------
Q 047978 225 SLFWMMHPIGPAVL-----DQIEGKLGLEK---TKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATT------- 289 (320)
Q Consensus 225 ~~~~i~h~~~~~~~-----~~~~~~lg~~~---e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~------- 289 (320)
.++-.|-.+...- ..+.+.|+-.. ..+... ++=..+||+.+|+=...|...+-.. +++.+.|
T Consensus 336 -~yIeaHGTGT~~gD~~E~~Al~~vf~~~~~~~~~~~vg-SvKs~iGH~~~AAG~a~lik~~lal-~~~~iPp~~~~~~p 412 (2582)
T TIGR02813 336 -GLIEAHGTGTAAGDVAEFGGLVSVFSQDNDQKQHIALG-SVKSQIGHTKSTAGTAGMIKAVLAL-HHKVLPPTINVDQP 412 (2582)
T ss_pred -CEEEecCCCCCCCCHHHHHHHHHHhcccccCCCCceee-ccccccccchHhHHHHHHHHHHHHH-hcCCcCCCCCCCCC
Confidence 3888998665443 33455555321 122221 1345689999888777776543110 0032211
Q ss_pred ------------------------CCCCceEEEEeeccchhhhheeeeec
Q 047978 290 ------------------------GEELEWGVLLGFEAGLTVEAIVLRSI 315 (320)
Q Consensus 290 ------------------------G~~~d~vll~~~G~G~~~~a~~l~~~ 315 (320)
..+..++++-+||-|.+-..++++-.
T Consensus 413 np~~~~~~~~~~v~~~~~pw~~~~~~~~r~a~vnsfGfGGtN~hvvlee~ 462 (2582)
T TIGR02813 413 NPKLDIENSPFYLNTETRPWMQREDGTPRRAGISSFGFGGTNFHMVLEEY 462 (2582)
T ss_pred CCCCCccccceeecCCcccCcccCCCCccEEEEeCccCCCeeEEEEEeec
Confidence 10115678889999888888888764
No 124
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=97.51 E-value=0.00037 Score=67.19 Aligned_cols=82 Identities=12% Similarity=0.022 Sum_probs=60.9
Q ss_pred cccchHHHHHHHHHHHHHHcCCCCCC--cCEEEEEeeCC-C--CCCCHHHHHHHHcCCC-------cc-------hhhhh
Q 047978 52 LVPKVPKLGKEAVSKAIKEWGQPISK--ITHLISCSVSG-V--DMPGADYQLTKLLGLK-------PS-------VKRVM 112 (320)
Q Consensus 52 ~~e~~~~la~~Aa~~aL~~ag~~~~d--Id~li~~s~t~-~--~~p~~a~~l~~~LGl~-------~~-------~c~~~ 112 (320)
.+.+..+|+.+|++++|+++|++++| ||.+|+++... . ..+..+..+...+|++ .. .|++-
T Consensus 44 ~~~s~~eL~~~a~~~al~~agl~~~d~~ID~vi~G~~~~~~~~~~~~~a~~~~~~~gl~~~~~gl~~~p~~~V~~~caSG 123 (438)
T PTZ00455 44 ENKTLEELLATAIQGTLENTGLDGKAALVDKVVVGNFLGELFSSQGHLGPAAVGSLGQSGASNALLYKPAMRVEGACASG 123 (438)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCcCEEEEEeccccccccccchHHHHHHhccCcccccccCCCceeEEECcCHHH
Confidence 36788999999999999999999999 99999887654 2 2244456666555554 21 25432
Q ss_pred hh--------hhcCCCCeEEEEEeecccc
Q 047978 113 LT--------AESNAGARVLVVCSEITVG 133 (320)
Q Consensus 113 l~--------l~~~~~~~~LVv~~e~~s~ 133 (320)
+. +++|..+.+||++.|+.+.
T Consensus 124 ~~Ai~~A~~~I~sG~~dvvlv~G~E~ms~ 152 (438)
T PTZ00455 124 GLAVQSAWEALLAGTSDIALVVGVEVQTT 152 (438)
T ss_pred HHHHHHHHHHHHCCCCCEEEEEEEeeccc
Confidence 11 7899999999999997653
No 125
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.43 E-value=0.003 Score=60.18 Aligned_cols=173 Identities=17% Similarity=0.157 Sum_probs=101.4
Q ss_pred cchHHHHHHHHHHHHHHcCCC-CCCcC--EE-EEEeeCC-CC--------------------------CC-CHHHHHHHH
Q 047978 54 PKVPKLGKEAVSKAIKEWGQP-ISKIT--HL-ISCSVSG-VD--------------------------MP-GADYQLTKL 101 (320)
Q Consensus 54 e~~~~la~~Aa~~aL~~ag~~-~~dId--~l-i~~s~t~-~~--------------------------~p-~~a~~l~~~ 101 (320)
.....+++.|+++||+++|++ ..+++ .- +.+|... .. +| ..+..++..
T Consensus 69 d~~~~~a~~Aa~eAl~dAgl~~~~~~~~r~gv~iGsg~gg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~vs~~ 148 (412)
T COG0304 69 DRFSQLAVVAAVEALEDAGLDNELNVDMRVGVAIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNLAAGNVAIV 148 (412)
T ss_pred cHHHHHHHHHHHHHHHHcCCCcccccCccEEEEEeccCCCcchhhhHHHHHHhcCCccCcCchhhhhhccchHHHHHHHH
Confidence 356788999999999999997 34443 22 2232222 10 11 133455555
Q ss_pred cCCCcc------hhhhhhh--------hhcCCCCeEEEEEeecc---------------ccc------ccCCCCCCchhh
Q 047978 102 LGLKPS------VKRVMLT--------AESNAGARVLVVCSEIT---------------VGT------FRAPSDENLSCL 146 (320)
Q Consensus 102 LGl~~~------~c~~~l~--------l~~~~~~~~LVv~~e~~---------------s~~------~~~~~~~~~~~~ 146 (320)
+|++.. .|++-.+ |+.|..+.+++.++|.. ++. ...|.|++
T Consensus 149 ~g~~G~~~~~~tACatg~~AIg~A~~~I~~G~ad~~iaGG~e~~i~~~~i~gF~am~Alst~nd~p~~asrPfd~~---- 224 (412)
T COG0304 149 FGLKGPNYTPVTACATGAHAIGDAVRLIRLGKADVVIAGGAEAAITPLGIAGFEAMRALSTRNDDPEKASRPFDKN---- 224 (412)
T ss_pred hCCCCCcCChhhhHHhHHHHHHHHHHHHHcCCCCEEEEcccccccCHHHHHHHHHHHHhccCCCCccccCCCCCCC----
Confidence 555432 2544322 78899999999999762 221 11122221
Q ss_pred hhhhhhccCceEEEEeecCCCC--CCCCeeEEeccCceecCCCccccc-ccccccceechhHHHHHHHHhhhcCCCCCCC
Q 047978 147 VNRAIVGDGTAALIVGACPDIN--TERPLFHIVPTAQTILPDSEDAIK-GHFRESPLIADNIDKFLAESFDQVSLNDHDW 223 (320)
Q Consensus 147 ~~~~~~GDgAaA~ll~~~~~~~--~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~g~~~~~~~~~i~~~l~~~g~~~~d~ 223 (320)
-.++++|.||+++||++.+... -.+.+-++...+... +.+. ....++| .....+++.+|+.+|++++|+
T Consensus 225 RdGfv~gEGag~lVLE~~ehA~aRGA~Iyaei~G~g~~~-----Da~h~t~P~p~g---~Ga~~am~~AL~~Agl~~~~i 296 (412)
T COG0304 225 RDGFVIGEGAGALVLEELEHALARGAKIYAEIVGYGTTS-----DAYHITAPAPDG---EGAIRAMRAALADAGLTPEDI 296 (412)
T ss_pred CCCEEEecceeEEEecChhhHHhCCCceEEEEEEEEecc-----cccccCCCCCCC---chHHHHHHHHHHHcCCCHhHC
Confidence 2489999999999999877531 111233444432211 1000 0112222 344588999999999999997
Q ss_pred CceEEEEcCCChhHHHH
Q 047978 224 NSLFWMMHPIGPAVLDQ 240 (320)
Q Consensus 224 ~~~~~i~h~~~~~~~~~ 240 (320)
.|+-.|-.+.+.-|.
T Consensus 297 --dYinaHgTsT~~nD~ 311 (412)
T COG0304 297 --DYINAHGTSTPANDK 311 (412)
T ss_pred --CEEeCCCccCCCccH
Confidence 399999877655443
No 126
>KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=97.35 E-value=0.00053 Score=61.69 Aligned_cols=71 Identities=20% Similarity=0.283 Sum_probs=52.1
Q ss_pred HHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHHHHHHcCCCcchhhhhHHHHhccCC---cccchHHHHHHHHHHh
Q 047978 207 KFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKTKLRETRHVLSEYGN---MASATVLFVLDEMRKR 280 (320)
Q Consensus 207 ~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e~~~~~~~~~~~~Gn---~~sasi~~~L~~~~~~ 280 (320)
.++..+|+++|++.+|+ ++|=++-+..-+.-...+.|+++|+++-..= -.-..|| ++.|-++..|.+.++.
T Consensus 298 laipk~lk~aG~~~sdV--d~~EiNEAFs~v~lA~iK~LgldP~kVNv~G-GAValGHPlG~SGaRi~~tL~~~L~~ 371 (396)
T KOG1390|consen 298 LAIPKALKKAGLEQSDV--DYWEINEAFSVVVLANIKKLGLDPSKVNVHG-GAVALGHPLGMSGARILVTLLHTLEQ 371 (396)
T ss_pred HHHHHHHHHcCcchhhh--hHHhhhhhhhHHHHHHHHHhCCCHhhccCCC-ceeecCCCcCCcchhHHHHHHHHHHh
Confidence 45678899999999997 3776666666666777899999999984310 0112455 5678899999999886
No 127
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=97.24 E-value=0.0012 Score=63.60 Aligned_cols=81 Identities=9% Similarity=-0.018 Sum_probs=59.1
Q ss_pred ccchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCC-CCCCCHHHHHHHHcCCCc---c-----hhhhhhh--------h
Q 047978 53 VPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSG-VDMPGADYQLTKLLGLKP---S-----VKRVMLT--------A 115 (320)
Q Consensus 53 ~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~-~~~p~~a~~l~~~LGl~~---~-----~c~~~l~--------l 115 (320)
+.+..+|+..|++++|+++|++++|||.+++++..+ ...+..+..+.-..|++. . .|++.+. +
T Consensus 28 ~~~~~eL~~~a~~~al~~agl~~~~Id~vv~G~~~~~~~~~~~~r~~~l~~gl~~~~p~~~V~~~CaSG~~ai~~A~~~I 107 (427)
T PRK09268 28 DASNQDMLTAALDGLVDRFGLQGERLGEVVAGAVLKHSRDFNLTRECVLGSALSPYTPAYDLQQACGTGLEAAILVANKI 107 (427)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCccccHHHHHHHHcCCCCCCceeeeechhhHHHHHHHHHHHHH
Confidence 567899999999999999999999999999997654 112334444334434432 1 2643221 7
Q ss_pred hcCCCCeEEEEEeecccc
Q 047978 116 ESNAGARVLVVCSEITVG 133 (320)
Q Consensus 116 ~~~~~~~~LVv~~e~~s~ 133 (320)
++|..+.+|+++.|..|.
T Consensus 108 ~sG~~d~vlvgG~E~ms~ 125 (427)
T PRK09268 108 ALGQIDSGIAGGVDTTSD 125 (427)
T ss_pred HCCCCCEEEEeeEEccCC
Confidence 899999999999998874
No 128
>PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the N-terminal domain of beta-ketoacyl-ACP synthases. ; PDB: 1J3N_B 3KZU_C 1W0I_A 2IX4_A 1F91_B 2BYZ_D 2AQB_C 2BZ3_C 1H4F_C 2VB9_B ....
Probab=97.01 E-value=0.0025 Score=56.57 Aligned_cols=109 Identities=18% Similarity=0.241 Sum_probs=67.4
Q ss_pred chHHHHHHHHHHHHHHcCCCCCC------cCEEEEEeeCC-C-----------------------CCCC-HHHHHHHHcC
Q 047978 55 KVPKLGKEAVSKAIKEWGQPISK------ITHLISCSVSG-V-----------------------DMPG-ADYQLTKLLG 103 (320)
Q Consensus 55 ~~~~la~~Aa~~aL~~ag~~~~d------Id~li~~s~t~-~-----------------------~~p~-~a~~l~~~LG 103 (320)
....|+..|+.+||+++|+++++ +. |+++++.. + ..|+ .+.+|+..+|
T Consensus 86 ~~~~~~l~aa~~Al~dAg~~~~~~~~~~r~g-v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~g 164 (254)
T PF00109_consen 86 RQSRLALAAAREALEDAGLDPDDLDGERRVG-VFVGSSSGDYEFYRALDEDGETPRDVSPWFVPNTLPNSAAGRIAILFG 164 (254)
T ss_dssp HHHHHHHHHHHHHHHHHTSTGGGHTGGGTEE-EEEEESSSHHHHHHHHHHHTTCGGGSHTTHHHHHSTTHHHHHHHHHHT
T ss_pred hhhhHHHHHhhhhccccccccccccccccee-eccccccccccccccccccccccccccccccCcccccccccchhhhcC
Confidence 34578999999999999998853 44 34444433 1 0232 4678999999
Q ss_pred CCcc------hhhhhhh--------hhcCCCCeEEEEEee-ccccc---------ccCCCCC--CchhhhhhhhhccCce
Q 047978 104 LKPS------VKRVMLT--------AESNAGARVLVVCSE-ITVGT---------FRAPSDE--NLSCLVNRAIVGDGTA 157 (320)
Q Consensus 104 l~~~------~c~~~l~--------l~~~~~~~~LVv~~e-~~s~~---------~~~~~~~--~~~~~~~~~~~GDgAa 157 (320)
++.. .|++.++ |++|..+.+||.++| ..++. .....+. ..+..-.++++|+||+
T Consensus 165 l~G~~~tv~~acaSgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~~s~~~~~~pf~~~~~G~v~gEGa~ 244 (254)
T PF00109_consen 165 LRGPSYTVSTACASGLAALEAAYRAIRSGEADVALVGGVDAPLSPFILAGFSALGALSADGPCRPFDPFADGFVLGEGAG 244 (254)
T ss_dssp B-SSEEEEE-GGGHHHHHHHHHHHHHHTTSSSEEEEEEEE--SSHHHHHHHHHTTBB-TTSGGGSTBTTB-SB-BB-EEE
T ss_pred CCCccccccccccccccccchhccccccccccccccccccccccccccccccccccccccccccccCCCCCCEEEECceE
Confidence 9753 3654332 789999999999999 33320 1111100 0001125899999999
Q ss_pred EEEEeec
Q 047978 158 ALIVGAC 164 (320)
Q Consensus 158 A~ll~~~ 164 (320)
++||++.
T Consensus 245 ~~vLe~~ 251 (254)
T PF00109_consen 245 ALVLERL 251 (254)
T ss_dssp EEEEEEH
T ss_pred EEEEEEh
Confidence 9999875
No 129
>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=96.38 E-value=0.16 Score=54.49 Aligned_cols=212 Identities=11% Similarity=0.146 Sum_probs=123.6
Q ss_pred HHHHHHHHHHHHcCCCCCCcCE----EEEEeeCC-CCCCC-------------------HHHHHHHHcCCCcc------h
Q 047978 59 LGKEAVSKAIKEWGQPISKITH----LISCSVSG-VDMPG-------------------ADYQLTKLLGLKPS------V 108 (320)
Q Consensus 59 la~~Aa~~aL~~ag~~~~dId~----li~~s~t~-~~~p~-------------------~a~~l~~~LGl~~~------~ 108 (320)
|..+.+-++|+++|+.++.+.. |+.+.+.. |.... .+.+|...|+++.. .
T Consensus 94 llLe~aw~AlEdAG~~~~~l~g~~tgV~~g~~~~~y~~~~~~~~~~~~~~~~~g~~~~~~a~Risy~l~l~GPs~~vdta 173 (1061)
T COG3321 94 LLLEVAWEALEDAGIYPDSLRGSATGVFAGASVADYLLLLLADDEAEPEYAITGNSSSVAAGRISYVLGLSGPSVTVDTA 173 (1061)
T ss_pred HHHHHHHHHHHHcCCCccccCCcceEEEEeeccCccccccccccccccceecccchhhHHHHHHHHHhcCCCCCccccch
Confidence 7899999999999999999984 44444444 43221 57889999999763 3
Q ss_pred hhhhhh--------hhcCCCCeEEEEEeeccccc----------ccCCCCC--CchhhhhhhhhccCceEEEEeecCCC-
Q 047978 109 KRVMLT--------AESNAGARVLVVCSEITVGT----------FRAPSDE--NLSCLVNRAIVGDGTAALIVGACPDI- 167 (320)
Q Consensus 109 c~~~l~--------l~~~~~~~~LVv~~e~~s~~----------~~~~~~~--~~~~~~~~~~~GDgAaA~ll~~~~~~- 167 (320)
|++.+. |++|.++-+|+=+....-.. ...|+.+ ..+....+++.|.|+++++|.+-...
T Consensus 174 CSSsLvAvhlA~~sL~~Ge~d~alaGgv~l~~~p~~~~~~~~~g~ls~~g~c~~fd~~adG~v~geG~g~vvLKrl~~A~ 253 (1061)
T COG3321 174 CSSSLVAVHLACQSLRLGECDLALAGGVNLVLSPESSYLFSAGGMLSPDGRCKAFDADADGYVRGEGAGVVVLKRLSDAE 253 (1061)
T ss_pred hhHHHHHHHHHHHHHHcCCCCEEEecceEeccCCcceeeeecccCcCCCCcceecccCCCCEEEeeeEEEEEEEEhHHHH
Confidence 755332 67788888887666554110 0012111 01123457899999999999876543
Q ss_pred CCCCCeeEEeccCceecCCCcccccccccccceechhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHH-----HHHH
Q 047978 168 NTERPLFHIVPTAQTILPDSEDAIKGHFRESPLIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVL-----DQIE 242 (320)
Q Consensus 168 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~-----~~~~ 242 (320)
......+.++.. +...-+... . .+... .......+++++|+.+|+++++|+ |+=.|..+..+- ..+.
T Consensus 254 ~dgd~IyavI~g-savn~dG~~--~-gltaP--~~~aQ~~v~~~al~~a~i~p~tv~--yvEaHgTGT~lGDpiE~~aL~ 325 (1061)
T COG3321 254 RDGDRIYAVIRG-SAVNQDGRS--N-GLTAP--NLEAQADVIREALADAGIDPATVQ--YVEAHGTGTPLGDPIEANALG 325 (1061)
T ss_pred hCCCeEEEEEEe-eeeccCCCc--C-CCCCC--CHHHHHHHHHHHHHhcCCCcccCc--EEEecCCCCCCcCHHHHHHHH
Confidence 112223333321 111111100 0 11111 135667899999999999999863 888888665443 3334
Q ss_pred HHcCCC-cchhhhhHHHHhccCCcccchHHHHHHHHH
Q 047978 243 GKLGLE-KTKLRETRHVLSEYGNMASATVLFVLDEMR 278 (320)
Q Consensus 243 ~~lg~~-~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~ 278 (320)
+.++-. ++....--++-.+.||+.+|+=...|-..+
T Consensus 326 ~v~~~~~~~~~c~iGSvKsNiGH~~~AaGiagliK~~ 362 (1061)
T COG3321 326 AVYGEGAPAQPCAIGSVKSNIGHLEAAAGIAGLIKTA 362 (1061)
T ss_pred HHhccCCCCCcccccccccccccHHHHHHHHHHHHHH
Confidence 444422 122222112455678888777666665543
No 130
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.95 E-value=0.049 Score=50.10 Aligned_cols=216 Identities=15% Similarity=0.149 Sum_probs=115.5
Q ss_pred ccceEEccccccCCCcccccccHHHHHhhhc------CCch--h--------HHHHH-------HHHHhhhcccchHHHH
Q 047978 4 LGKFQETQRPQANPANCVYQTDYPDFYFRIT------SSNH--M--------TELKE-------KFKRMYILVPKVPKLG 60 (320)
Q Consensus 4 ~~~~~I~a~~~~lP~~~i~~~e~~~~~~~~~------~~~~--~--------~gi~~-------~~r~~~~~~e~~~~la 60 (320)
+++|.|+++|...|=-+-..+-+.+...... .+++ + -++.+ ..|++. +...|+
T Consensus 23 ~rRVVITGmG~VTplG~~v~~~w~~Ll~GesGI~~l~~~d~k~~p~~v~g~Ip~f~~e~~~s~~~~r~ms----~~~~~a 98 (440)
T KOG1394|consen 23 MRRVVITGMGAVTPLGNGVHTSWRNLLSGESGISSLEGPDYKSIPFTVAGKIPRFSVEDYVSKGDERRMS----KFTKLA 98 (440)
T ss_pred ceeEEEeccceeecCCCChHHHHHHhhccccCcccccccccccCcchheeeccccccccccchhhhhhhh----HHHHHH
Confidence 4689999999999877655555544431110 0111 0 00000 012222 457789
Q ss_pred HHHHHHHHHHcCCCCC---CcCE----EEEEe----------------------eCCCCCC----C-HHHHHHHHcCCCc
Q 047978 61 KEAVSKAIKEWGQPIS---KITH----LISCS----------------------VSGVDMP----G-ADYQLTKLLGLKP 106 (320)
Q Consensus 61 ~~Aa~~aL~~ag~~~~---dId~----li~~s----------------------~t~~~~p----~-~a~~l~~~LGl~~ 106 (320)
..|+++||+++++-+. +.|. +.+++ .+||+.| . .+.+|.-++|++.
T Consensus 99 l~aa~eAL~da~~~~~~~~e~dk~~~GV~iGtgmg~l~~i~e~a~~~~~~g~rrvsPffVPkil~NM~ag~vsm~~gl~G 178 (440)
T KOG1394|consen 99 LTAAEEALKDAGLLDVNLSEEDKEKTGVLIGTGMGDLEDIYETAQNLSEKGYRRVSPFFVPKILTNMAAGYVSMKYGLRG 178 (440)
T ss_pred HHHHHHHHHhcCCCCcccchhhhhhhceEeccccccHHHHHHHHHHHHHhcccccCccccchhhcccccchhhhhhcCcC
Confidence 9999999999998665 2221 12222 2334444 2 3578888888864
Q ss_pred c------hhhhhhh--------hhcCCCCeEEEEEeeccc---------------cc------ccCCCCCCchhhhhhhh
Q 047978 107 S------VKRVMLT--------AESNAGARVLVVCSEITV---------------GT------FRAPSDENLSCLVNRAI 151 (320)
Q Consensus 107 ~------~c~~~l~--------l~~~~~~~~LVv~~e~~s---------------~~------~~~~~~~~~~~~~~~~~ 151 (320)
. +|++-.+ ++.|..+..|-=++|.+- .. ...|-|.. -.+++
T Consensus 179 pnhsvSTACATg~h~igda~n~Ir~GdaDvmlAGgsE~~I~PlslaGF~r~RALSt~nd~P~~aSRPfD~~----RdGFV 254 (440)
T KOG1394|consen 179 PNHSVSTACATGNHCIGDAFNFIRLGDADVMLAGGSEACINPLSLAGFSRARALSTRNDNPQKASRPFDKK----RDGFV 254 (440)
T ss_pred CchhhHhhhhhccchHHHHHHHHHhCccceeeccCcceeecchhhhhHHHHHHhhhcCCCccccCCCCccC----CCcee
Confidence 2 3543211 454544444433344431 10 01122221 24789
Q ss_pred hccCceEEEEeecCCCCC--CCCeeEEeccCceecCCCccccc-ccccccceechhHHHHHHHHhhhcCCCCCCCCceEE
Q 047978 152 VGDGTAALIVGACPDINT--ERPLFHIVPTAQTILPDSEDAIK-GHFRESPLIADNIDKFLAESFDQVSLNDHDWNSLFW 228 (320)
Q Consensus 152 ~GDgAaA~ll~~~~~~~~--~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~g~~~~~~~~~i~~~l~~~g~~~~d~~~~~~ 228 (320)
+|.|++.+||+.=+.... ..-+.+++..+- +.+.+. ....++| .....+++++|+.+|++++|++ |+
T Consensus 255 mGEGagvlvlEelEHA~~RgA~I~AE~lGygl-----s~Da~HiT~P~~dG---~Ga~~am~raL~~Agl~pe~i~--Yv 324 (440)
T KOG1394|consen 255 MGEGAGVLVLEELEHAKKRGAPIYAEVLGYGL-----SSDAYHITSPDPDG---AGAVLAMERALKDAGLSPEDID--YV 324 (440)
T ss_pred eccceeEEehHhHHHHHHcCCceeHHhhcCcc-----cccccccCCCCCCc---chHHHHHHHHHHHcCCChhhcC--ee
Confidence 999999999987554210 001123333211 111110 0123333 4455789999999999999973 88
Q ss_pred EEcCCChhH
Q 047978 229 MMHPIGPAV 237 (320)
Q Consensus 229 i~h~~~~~~ 237 (320)
=.|.-+..+
T Consensus 325 NAHATST~~ 333 (440)
T KOG1394|consen 325 NAHATSTPL 333 (440)
T ss_pred ecccccCcC
Confidence 888866544
No 131
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....
Probab=95.46 E-value=0.04 Score=43.50 Aligned_cols=99 Identities=15% Similarity=0.140 Sum_probs=64.5
Q ss_pred HHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHHHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhc
Q 047978 205 IDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEE 284 (320)
Q Consensus 205 ~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~ 284 (320)
-..+++.+++++|++++|+| .|=+|-......-...+.|+++++++-.+=- .--+||...||=...+.+++.+...
T Consensus 24 p~~A~~~al~~ag~~~~did--~~Ei~EaFA~~~l~~~~~lg~~~~~vN~~GG-~la~GHP~gasG~r~~~~l~~~L~~- 99 (123)
T PF02803_consen 24 PVPAARKALERAGLTPDDID--VIEINEAFAAQVLAFLEALGLDPEKVNPNGG-ALALGHPLGASGARLVVELAHQLRR- 99 (123)
T ss_dssp HHHHHHHHHHHHT--GGGES--EEEE--SBHHHHHHHHHHHTTGGGGBSTT---HHHH-BHTTTHHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHhCCCccccc--hhhccchhhhHHHHhhccccccccccCcccc-cccccccccccccchhhhhHHHHHH-
Confidence 34688999999999999963 8889998888888889999999988755311 2237898877766666666665221
Q ss_pred CCCCCCCCCceEEEEeeccchhhhheeee
Q 047978 285 GKATTGEELEWGVLLGFEAGLTVEAIVLR 313 (320)
Q Consensus 285 g~l~~G~~~d~vll~~~G~G~~~~a~~l~ 313 (320)
+.| ++.+....+.|....+++++
T Consensus 100 ---~~~---~~gla~~~~ggG~g~a~lle 122 (123)
T PF02803_consen 100 ---RGG---RYGLAAICAGGGQGSAVLLE 122 (123)
T ss_dssp ---HTT---SEEEEEEEETTTEEEEEEEE
T ss_pred ---hch---hhhhHHhcccceeeEEEEEE
Confidence 224 66666555555555556665
No 132
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=95.11 E-value=0.084 Score=50.87 Aligned_cols=76 Identities=18% Similarity=0.192 Sum_probs=45.4
Q ss_pred hhhhhhccCceEEEEeecCCC-CC-CCCeeEEeccCceecCCCcccccccccccceechhHHHHHHHHhhhcCCCCCCCC
Q 047978 147 VNRAIVGDGTAALIVGACPDI-NT-ERPLFHIVPTAQTILPDSEDAIKGHFRESPLIADNIDKFLAESFDQVSLNDHDWN 224 (320)
Q Consensus 147 ~~~~~~GDgAaA~ll~~~~~~-~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~i~~~l~~~g~~~~d~~ 224 (320)
...+..+|||+|+||.+++.. .. .++..++.+.+....... .........++.+++++|++++|+|
T Consensus 261 ~~~s~~~DGAaA~vl~s~e~A~~~~~~p~~~i~~~~~~~~~~~------------~~~~~~~~a~~~al~~aGl~~~did 328 (426)
T PRK08170 261 GNSSQITDGACWLLLASEEAVKKYGLPPLGRIVDSQWAALDPS------------QMGLGPVHAATPLLQRHGLTLEDLD 328 (426)
T ss_pred cccCCCCCceEEEEEecHHHHHHCCCCceEEEEEeeEeeeCch------------hhcccHHHHHHHHHHHcCCCHHHcC
Confidence 346678999999999976542 11 123334433222111000 0011234788999999999999973
Q ss_pred ceEEEEcCCChh
Q 047978 225 SLFWMMHPIGPA 236 (320)
Q Consensus 225 ~~~~i~h~~~~~ 236 (320)
.+=+|-....
T Consensus 329 --~~ei~daFa~ 338 (426)
T PRK08170 329 --LWEINEAFAA 338 (426)
T ss_pred --EEEecchhHH
Confidence 7777776543
No 133
>KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism]
Probab=94.92 E-value=0.06 Score=48.64 Aligned_cols=144 Identities=17% Similarity=0.211 Sum_probs=76.3
Q ss_pred hhhhccCceEEEEeecCCC-CCCCCeeEE-eccCceecCCCcccccccccccceechhHHHHHHHHhhhcCCCCCCCCce
Q 047978 149 RAIVGDGTAALIVGACPDI-NTERPLFHI-VPTAQTILPDSEDAIKGHFRESPLIADNIDKFLAESFDQVSLNDHDWNSL 226 (320)
Q Consensus 149 ~~~~GDgAaA~ll~~~~~~-~~~~~~~~~-~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~i~~~l~~~g~~~~d~~~~ 226 (320)
..-.+|||+|+||-+.... ...-|.+-. ++....-.|. . +.--| .. -+|..+++.+|++.+|||
T Consensus 276 sSQvSDGa~aVLLmkRs~A~qlgLPvlgvfr~f~~vGv~P--~-----iMGiG---Pa--vAIp~alk~aGL~v~did-- 341 (435)
T KOG1389|consen 276 SSQVSDGAGAVLLMKRSVAMQLGLPVLGVFRDFAAVGVPP--A-----IMGIG---PA--VAIPKALKAAGLEVDDID-- 341 (435)
T ss_pred hhhcccchhhhhhhhhhhHhhcCCceeEEeeeeeeecCCH--H-----HcCCC---ch--hhhHHHHHHcCCcccccc--
Confidence 4567899999999887643 222232222 1111000111 0 11111 11 246678999999999973
Q ss_pred EEEEcCCChhHHHHHHHHcCCCcchhhhh---HHHHhccCCcccchHHHHHHHHHHhchhcCCCCCCCCCce-EEEEeec
Q 047978 227 FWMMHPIGPAVLDQIEGKLGLEKTKLRET---RHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEW-GVLLGFE 302 (320)
Q Consensus 227 ~~i~h~~~~~~~~~~~~~lg~~~e~~~~~---~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~-vll~~~G 302 (320)
+|=++.+...=.-...++|++++||+-.+ .+..+-.|-+|+=-+..-|..+-++ |+- + .+ |+-+-+|
T Consensus 342 ~FEINEAFAsQ~~yc~~KL~ld~ekVN~~GGaiAlGHPlGatGAR~VaTlL~emKrr----gkd--~---~~GVvSmCIG 412 (435)
T KOG1389|consen 342 LFEINEAFASQALYCRNKLGLDPEKVNVNGGAIALGHPLGATGARCVATLLHEMKRR----GKD--C---RFGVVSMCIG 412 (435)
T ss_pred eeehhHHHHHHHHHHHHHhCCCHHHcCCCCceeeccCCcCCccHhHHHHHHHHHHhh----ccc--c---ccceEEEeec
Confidence 66554444333444578999999998542 1122334444444444333333332 321 1 12 6677788
Q ss_pred cchhhhheeeeecc
Q 047978 303 AGLTVEAIVLRSIP 316 (320)
Q Consensus 303 ~G~~~~a~~l~~~~ 316 (320)
.|+..+ ++|+...
T Consensus 413 tGmGaA-AvFer~~ 425 (435)
T KOG1389|consen 413 TGMGAA-AVFERGG 425 (435)
T ss_pred CCcchh-eeeecCC
Confidence 888766 5566553
No 134
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=94.09 E-value=0.17 Score=48.26 Aligned_cols=75 Identities=13% Similarity=0.008 Sum_probs=54.1
Q ss_pred HHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHHHHHHcCCCcc------------------hhhhhHHHHhccCCcc
Q 047978 205 IDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKT------------------KLRETRHVLSEYGNMA 266 (320)
Q Consensus 205 ~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e------------------~~~~~~~~~~~~Gn~~ 266 (320)
....++.+++++|++++|+| .+=+|-......-...+.||+.+. ++-.+ -=.--+||..
T Consensus 271 ~~~A~~~al~~Agi~~~DID--~~Ei~d~Fa~~~l~~~e~lgl~~~g~~~~~~~~g~~~~~G~~pvN~~-GG~la~GhP~ 347 (393)
T cd00826 271 PIEAARKALEKAGLGIGDLD--LIEAHDAFAANACATNEALGLCPEGQGGALVDRGDNTYGGKSIINPN-GGAIAIGHPI 347 (393)
T ss_pred HHHHHHHHHHHcCCCHHHcC--eeehhhhhHHHHHHHHHHhCCCcccchhhhhhcCccccCCcceECCC-CchhhcCCCc
Confidence 45788999999999999873 788888877777777899998752 22111 0122379999
Q ss_pred cchHHHHHHHHHHhch
Q 047978 267 SATVLFVLDEMRKRSV 282 (320)
Q Consensus 267 sasi~~~L~~~~~~~~ 282 (320)
.|+=+..+.+++.+..
T Consensus 348 gAtG~~~~~e~~~qL~ 363 (393)
T cd00826 348 GASGAAICAELCFELK 363 (393)
T ss_pred cccHHHHHHHHHHHHh
Confidence 8888888888877644
No 135
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=93.95 E-value=0.27 Score=47.54 Aligned_cols=129 Identities=16% Similarity=0.106 Sum_probs=77.0
Q ss_pred hhhhhhhccCceEEEEeecCCC-CC-CCC----eeEEeccCceecCCCcccccccccccceechhHHHHHHHHhhhcCCC
Q 047978 146 LVNRAIVGDGTAALIVGACPDI-NT-ERP----LFHIVPTAQTILPDSEDAIKGHFRESPLIADNIDKFLAESFDQVSLN 219 (320)
Q Consensus 146 ~~~~~~~GDgAaA~ll~~~~~~-~~-~~~----~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~i~~~l~~~g~~ 219 (320)
....+..+|||+|+||.+++.. .. ..| ..++.+.+....+...++.+ +. ........++.+++++|++
T Consensus 252 ~~d~s~~sDGAaA~vl~See~A~~l~~~p~~~~~v~i~g~~~~~~~~~~~~~~--~~----~~~~~~~A~~~a~~~AGl~ 325 (438)
T PTZ00455 252 MTDCSQVSDGGAGLVLASEEGLQKMGLSPNDSRLVEIKSLACASGNLYEDPPD--AT----RMFTSRAAAQKALSMAGVK 325 (438)
T ss_pred hhcCCCccccceEEEEecHHHHHhcCCCCCCCccEEEEEEEEecCCcccCccc--cc----cchHHHHHHHHHHHHcCCC
Confidence 3457788999999999876532 11 111 23444432221111000000 00 1122357889999999999
Q ss_pred CCCCCceEEEEcCCChhHHHHHHHHcCCCcc----------------hhhhhH-HHHhccCCcccchHHHHHHHHHHhch
Q 047978 220 DHDWNSLFWMMHPIGPAVLDQIEGKLGLEKT----------------KLRETR-HVLSEYGNMASATVLFVLDEMRKRSV 282 (320)
Q Consensus 220 ~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e----------------~~~~~~-~~~~~~Gn~~sasi~~~L~~~~~~~~ 282 (320)
++|+| .+=+|-......-...+.||+.+. +.+.|. -=.--+||...|+=...+.+++.+..
T Consensus 326 ~~DiD--~~Ei~daFa~~~l~~~e~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG~la~GHP~gAtG~~~v~e~~~QLr 403 (438)
T PTZ00455 326 PSDLQ--VAEVHDCFTIAELLMYEALGIAEYGHAKDLIRNGATALEGRIPVNTGGGLLSFGHPVGATGVKQIMEVYRQMK 403 (438)
T ss_pred HHHCc--EeeecccChHHHHHHHHHcCCCCCCchHHHHhcCCcccCCCceeeCCCchhhcCCCcchHHHHHHHHHHHHHh
Confidence 99973 788888887777777899998763 122210 01233699988887777777776643
No 136
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=92.53 E-value=0.57 Score=45.17 Aligned_cols=149 Identities=13% Similarity=0.045 Sum_probs=77.1
Q ss_pred hhhhhhccCceEEEEeecCCC-CC-CCCeeEEecc-CceecCCCcccccccccccceechhHHHHHHHHhhhcCCCCCCC
Q 047978 147 VNRAIVGDGTAALIVGACPDI-NT-ERPLFHIVPT-AQTILPDSEDAIKGHFRESPLIADNIDKFLAESFDQVSLNDHDW 223 (320)
Q Consensus 147 ~~~~~~GDgAaA~ll~~~~~~-~~-~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~g~~~~~~~~~i~~~l~~~g~~~~d~ 223 (320)
.+.+..+|||+|+||.+++.. .. ..+...+... .....|... . .+ + .......++.+++++|++++|+
T Consensus 259 ~n~~~~~DGAaAvvl~s~~~A~~l~~~p~~~i~~~~~~~~~~~~~-----~--~~-~-~~~~~~a~~~a~~~AGl~~~Di 329 (427)
T PRK09268 259 GNSTPLTDGASVVLLASEEWAAEHGLPVLAYLVDAETAAVDFVHG-----K--EG-L-LMAPAYAVPRLLARNGLTLQDF 329 (427)
T ss_pred cccCCCCCceEEEEEecHHHHHHcCCCceEEEEEEEEEcCCcccc-----c--ch-h-hccHHHHHHHHHHHcCCCHHHC
Confidence 456788999999999976542 11 1232233221 111111100 0 00 1 1122358889999999999997
Q ss_pred CceEEEEcCCChhHHHHH---HHHcCCCc------------chhhhhH-HHHhccCCcccchHHHHHHHHHHhchhcCCC
Q 047978 224 NSLFWMMHPIGPAVLDQI---EGKLGLEK------------TKLRETR-HVLSEYGNMASATVLFVLDEMRKRSVEEGKA 287 (320)
Q Consensus 224 ~~~~~i~h~~~~~~~~~~---~~~lg~~~------------e~~~~~~-~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l 287 (320)
| .+=+|-......-.. .+.+|+-+ ++.+.|- -=.--+||...|+=...+.+++.+..+
T Consensus 330 d--~~Ei~d~Fa~~~l~~l~~~e~lG~~~~g~g~~~~~G~~~~~pvN~~GG~la~GhP~gATG~~~v~e~~~QL~~---- 403 (427)
T PRK09268 330 D--FYEIHEAFASQVLATLKAWEDEEYCRERLGLDAPLGSIDRSKLNVNGSSLAAGHPFAATGGRIVATLAKLLAE---- 403 (427)
T ss_pred C--EEEeccccHHHHHHHHHHhhhccccccccccccccCcCCCcccCCCcCHHhcCCCcccchHHHHHHHHHHHHh----
Confidence 4 677777654432112 23333211 1222210 001126899877777777777766321
Q ss_pred CCCCCCceEEEEeeccchhhhheeee
Q 047978 288 TTGEELEWGVLLGFEAGLTVEAIVLR 313 (320)
Q Consensus 288 ~~G~~~d~vll~~~G~G~~~~a~~l~ 313 (320)
+.| ++.|....++|....+++++
T Consensus 404 ~~~---~~gl~~~c~~gG~g~a~~~e 426 (427)
T PRK09268 404 KGS---GRGLISICAAGGQGVTAILE 426 (427)
T ss_pred cCC---CEEEEEEcccCchheEEEEe
Confidence 223 56666555555555556654
No 137
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2.3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....
Probab=92.11 E-value=0.23 Score=36.59 Aligned_cols=36 Identities=25% Similarity=0.350 Sum_probs=24.9
Q ss_pred HHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcc
Q 047978 68 IKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPS 107 (320)
Q Consensus 68 L~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~ 107 (320)
|+++|++++|||.+++...+. .....+.+++|++++
T Consensus 1 L~~~g~~~~did~~i~hq~~~----~~~~~~~~~lgi~~~ 36 (90)
T PF08541_consen 1 LERAGLSPDDIDHFIPHQASK----KILDSIAKRLGIPPE 36 (90)
T ss_dssp HHHTT--GGGESEEEE-SSSH----HHHHHHHHHHTS-GG
T ss_pred CccccCCHHHCCEEEeCCCCH----HHHHHHHHHcCCcHH
Confidence 789999999999998766333 344568899999875
No 138
>COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism]
Probab=90.93 E-value=0.61 Score=44.44 Aligned_cols=81 Identities=16% Similarity=0.049 Sum_probs=58.6
Q ss_pred ccchHHHHHHHHHHHHHHc--CCCCCCcCEEEEEeeCC--CCCCCHHHHHHHHcCCCcc--------hhhhhhh------
Q 047978 53 VPKVPKLGKEAVSKAIKEW--GQPISKITHLISCSVSG--VDMPGADYQLTKLLGLKPS--------VKRVMLT------ 114 (320)
Q Consensus 53 ~e~~~~la~~Aa~~aL~~a--g~~~~dId~li~~s~t~--~~~p~~a~~l~~~LGl~~~--------~c~~~l~------ 114 (320)
+....++.....+..+++. ++++.+||.+|.++..+ ...+..+..++..+|++.. .|.+-+.
T Consensus 24 ~l~~e~l~~a~~~a~~~~~~~~vd~~~v~~~~~G~~~~~g~~~~~~ar~~a~~aGl~~~~p~~~V~~~c~SG~~Av~~A~ 103 (392)
T COG0183 24 ELAAEALGAALIDAGLERAPADVDAADVDDVILGCVLQAGEQGQNIARQAALAAGLPGSVPAVTVNRACASGLAAVRLAA 103 (392)
T ss_pred hcCHHHHHHHHHHHHhhhccccCCHHHhhhheeccccccccccccHHHHHHHHcCCCCCCCceEEeccchhHHHHHHHHH
Confidence 3445555555555555433 57777888889887777 3566788899999999862 2653221
Q ss_pred --hhcCCCCeEEEEEeecccc
Q 047978 115 --AESNAGARVLVVCSEITVG 133 (320)
Q Consensus 115 --l~~~~~~~~LVv~~e~~s~ 133 (320)
+++|..+.+|+++.|+.|.
T Consensus 104 ~~I~sG~~dvvlagG~E~mS~ 124 (392)
T COG0183 104 QAIASGEADVVLAGGVEKMSD 124 (392)
T ss_pred HHHHCCCCCEEEEEeeeeccC
Confidence 8899999999999999986
No 139
>KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=89.37 E-value=0.39 Score=42.40 Aligned_cols=52 Identities=21% Similarity=0.227 Sum_probs=40.9
Q ss_pred ccchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCc
Q 047978 53 VPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKP 106 (320)
Q Consensus 53 ~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~ 106 (320)
+.+..||.+-|++.+|+.+++.++.||.+|++..-. ..+...++.++.|++.
T Consensus 25 g~~aTdL~~~AakAAL~aa~v~~e~VD~VI~GNV~a--SSsDgIYl~RHvGL~~ 76 (396)
T KOG1391|consen 25 GLSATDLGVVAAKAALKAANVGAEAVDHVIMGNVLA--SSSDGIYLARHVGLRV 76 (396)
T ss_pred CcchhhHHHHHHHHHHhhcCCChhhcceEEEeeeee--ccCCceEeeecccccc
Confidence 567889999999999999999999999999987543 1224456667776654
No 140
>PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain
Probab=88.39 E-value=1.5 Score=38.25 Aligned_cols=30 Identities=20% Similarity=0.279 Sum_probs=24.5
Q ss_pred chHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCC
Q 047978 55 KVPKLGKEAVSKAIKEWGQPISKITHLISCSVSG 88 (320)
Q Consensus 55 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~ 88 (320)
...-|++.++.+++++. +++|.+||+|..+
T Consensus 33 ~~~rla~~~a~~~~~~~----~~~d~~VfaS~~G 62 (218)
T PF13723_consen 33 RLSRLALEAALECLAED----EQPDAIVFASRHG 62 (218)
T ss_pred HHHHHHHHHHHHHHhcc----CCCCcEEEEeCCC
Confidence 46789999999998653 6788999999877
No 141
>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane
Probab=87.79 E-value=2 Score=38.91 Aligned_cols=84 Identities=10% Similarity=0.147 Sum_probs=55.6
Q ss_pred chhHHHHHHHHhhhcCCCCCCCCceEEE---EcCCChhHHHHHHHHcCCCcchhhhhHHHHhccCCcccc--hHHHHHHH
Q 047978 202 ADNIDKFLAESFDQVSLNDHDWNSLFWM---MHPIGPAVLDQIEGKLGLEKTKLRETRHVLSEYGNMASA--TVLFVLDE 276 (320)
Q Consensus 202 ~~~~~~~i~~~l~~~g~~~~d~~~~~~i---~h~~~~~~~~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sa--si~~~L~~ 276 (320)
...+..+++++|+++|++++||+ +.++ .-.+.+.+-..+.+++|+..+-...+ .+=+|.+ -+-+.|+.
T Consensus 84 e~v~f~av~~LL~ktgv~p~dId-iLVvncs~f~ptPSLsamIvnr~~mr~di~~~n------LsGMGCsAgliai~lA~ 156 (290)
T PF08392_consen 84 EMVIFGAVDDLLAKTGVKPSDID-ILVVNCSLFNPTPSLSAMIVNRYGMRSDIKSYN------LSGMGCSAGLIAIDLAK 156 (290)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-EEEEECcCCCcCCcHHHHHHHHhCCCcCeeeec------ccCCcchhhHHHHHHHH
Confidence 44667889999999999999985 3221 23456788899999999987655443 3444444 44444444
Q ss_pred HHHhchhcCCCCCCCCCceEEEEee
Q 047978 277 MRKRSVEEGKATTGEELEWGVLLGF 301 (320)
Q Consensus 277 ~~~~~~~~g~l~~G~~~d~vll~~~ 301 (320)
-+=+ ..|+ .++|+++.
T Consensus 157 ~lL~------~~p~---~~ALVVst 172 (290)
T PF08392_consen 157 DLLQ------AHPN---SYALVVST 172 (290)
T ss_pred HHHH------hCCC---cEEEEEEE
Confidence 3322 3567 78888764
No 142
>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A ....
Probab=87.33 E-value=1.3 Score=34.41 Aligned_cols=75 Identities=15% Similarity=0.178 Sum_probs=46.0
Q ss_pred hhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHHH-----HHHcCCCc--chhhhhHHHHhccCCcccchHHHHHH
Q 047978 203 DNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQI-----EGKLGLEK--TKLRETRHVLSEYGNMASATVLFVLD 275 (320)
Q Consensus 203 ~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~-----~~~lg~~~--e~~~~~~~~~~~~Gn~~sasi~~~L~ 275 (320)
..+.++++++|+++|++++|| .++..|-.+....|.. .+.++-.. ..+..+ ..-..+||+.+++-++.|.
T Consensus 25 ~~~~~~i~~al~~agi~~~~I--~~i~~hg~Gt~~~D~~E~~ai~~~~~~~~~~~~~~v~-s~K~~~Gh~~~asG~~~l~ 101 (119)
T PF02801_consen 25 AALARAIRRALADAGISPEDI--DYIEAHGTGTPLGDAAEAEAIARVFGDSARQQPVPVG-SVKSNIGHTEAASGLLSLA 101 (119)
T ss_dssp HHHHHHHHHHHHHHTS-GGGE--EEEE----SSHHHHHHHHHHHHHHHGGGGGTSTSEEE--THHHH-B-GGGHHHHHHH
T ss_pred HHHHHHHHHHHhhhccccccc--eeeeeeccccccchhhhhhhhhhhhccccccccccee-ccccccccccccchHHHHH
Confidence 567788999999999999986 3899999887765543 33344221 112221 1355689999999999998
Q ss_pred HHHHh
Q 047978 276 EMRKR 280 (320)
Q Consensus 276 ~~~~~ 280 (320)
..+-.
T Consensus 102 ~~~l~ 106 (119)
T PF02801_consen 102 KALLA 106 (119)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87654
No 143
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=84.55 E-value=2 Score=39.23 Aligned_cols=47 Identities=19% Similarity=0.217 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcc
Q 047978 57 PKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPS 107 (320)
Q Consensus 57 ~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~ 107 (320)
.+...++.+++|+++|++++|||.+++..... ..-..++++||++..
T Consensus 222 ~~~~~~~i~~~l~~~g~~~~di~~~~~h~~~~----~~~~~~~~~lgl~~~ 268 (320)
T cd00830 222 VRLMPESIEEALEKAGLTPDDIDWFVPHQANL----RIIEAVAKRLGLPEE 268 (320)
T ss_pred HHhhHHHHHHHHHHcCCCHHHCCEEEECCCCH----HHHHHHHHHhCCCHH
Confidence 34567889999999999999999887665333 334568899999764
No 144
>PRK08304 stage V sporulation protein AD; Validated
Probab=83.11 E-value=11 Score=34.83 Aligned_cols=81 Identities=12% Similarity=0.197 Sum_probs=49.2
Q ss_pred chhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhH-HHHHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHH-H
Q 047978 202 ADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAV-LDQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMR-K 279 (320)
Q Consensus 202 ~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~-~~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~-~ 279 (320)
.+...++++.+|+++|++++||+ ..++-...+..+ -..+++.||+|. +.-++.|++...-+.++..+ +
T Consensus 57 seLa~eAa~~ALekAGI~~~DID-~lI~Gdll~Q~~sAs~vA~~LGIPa---------~dV~gACST~~~AL~lAa~lI~ 126 (337)
T PRK08304 57 RKMMEDAIQQALQKANLKKSDID-YLLAGDLLNQIISANFAARELGIPF---------LGLYGACSTMMESLALGSMLID 126 (337)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-EEEEECCCCCcchHHHHHHHhCCcE---------EEEeccCHHHHHHHHHHHHHHh
Confidence 35567888999999999999974 233333333222 334668888742 33467777666655555543 3
Q ss_pred hchhcCCCCCCCCCceEEEEeec
Q 047978 280 RSVEEGKATTGEELEWGVLLGFE 302 (320)
Q Consensus 280 ~~~~~g~l~~G~~~d~vll~~~G 302 (320)
. |. - |++|+++..
T Consensus 127 S----G~---a---d~VLVV~Ss 139 (337)
T PRK08304 127 G----GF---A---DRVLAATSS 139 (337)
T ss_pred c----CC---C---CEEEEEEcc
Confidence 3 22 1 777776644
No 145
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=82.10 E-value=3.1 Score=38.10 Aligned_cols=45 Identities=18% Similarity=0.073 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcc
Q 047978 59 LGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPS 107 (320)
Q Consensus 59 la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~ 107 (320)
...++.+++|+++|++++|||.++.... .+..-..+.+.||++..
T Consensus 220 ~~~~~i~~~l~~~g~~~~di~~~~~h~~----~~~~~~~~~~~lg~~~~ 264 (319)
T PRK09352 220 ELAKVAREALEAAGLTPEDIDWLVPHQA----NLRIIDATAKKLGLPME 264 (319)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHhCCCHH
Confidence 3567899999999999999999986542 23344678889999874
No 146
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=81.20 E-value=3.9 Score=38.67 Aligned_cols=49 Identities=8% Similarity=0.036 Sum_probs=35.8
Q ss_pred chHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHc-----CCCcc
Q 047978 55 KVPKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLL-----GLKPS 107 (320)
Q Consensus 55 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~L-----Gl~~~ 107 (320)
...+...++.+++|+++|+.++|||.++....+. ..-..+.++| |++++
T Consensus 269 ~~~~~~~~~i~~~L~~~gl~~~DId~~v~Hq~n~----~~~~~v~~~l~~~~~gl~~~ 322 (378)
T PRK06816 269 NIVVYTIKPLLELVDKRNLDPDDIDYFLPHYSSE----YFREKIVELLAKAGFMIPEE 322 (378)
T ss_pred HhHHHHHHHHHHHHHHcCCChhhCCEEeeCcccH----HHHHHHHHHHHhccCCCChh
Confidence 4445668899999999999999999988554332 3345667766 78764
No 147
>PRK12404 stage V sporulation protein AD; Provisional
Probab=79.21 E-value=14 Score=34.25 Aligned_cols=66 Identities=12% Similarity=0.245 Sum_probs=45.1
Q ss_pred hhHHHHHHHHhhhcCCCCCCCCceEEEEcCC-ChhHH-HHHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHH
Q 047978 203 DNIDKFLAESFDQVSLNDHDWNSLFWMMHPI-GPAVL-DQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRK 279 (320)
Q Consensus 203 ~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~-~~~~~-~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~ 279 (320)
+...++++.+|+++|++++||+ +++.... +..+. ..+++.||+|. +.-||-|++..--+.++..+=
T Consensus 56 ~L~~EA~~~AL~kAGI~~~DID--~i~vGdL~nQ~ipssfvar~LGIP~---------~gV~gACSTg~eAL~lAa~~V 123 (334)
T PRK12404 56 KLLEEACSRAIEKAKLRKEDIQ--FFLAGDLMNQITPTSFAARTLGIPY---------LGLFGACSTSMEGLALAALIV 123 (334)
T ss_pred HHHHHHHHHHHHHcCCCHHHCC--EEEEEecCCCcCcHHHHHHHhCCCc---------cceeecCHHHHHHHHHHHHHH
Confidence 5567888999999999999974 4444222 22222 26778999763 344788888888777776643
No 148
>PRK06840 hypothetical protein; Validated
Probab=79.08 E-value=2.3 Score=39.46 Aligned_cols=46 Identities=20% Similarity=0.160 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcc
Q 047978 58 KLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPS 107 (320)
Q Consensus 58 ~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~ 107 (320)
....++.+++|+++|++++|||.++..... +..-..++++||++..
T Consensus 237 ~~~~~~i~~~L~~~gl~~~did~~~~h~~~----~~~~~~~~~~Lgl~~~ 282 (339)
T PRK06840 237 PNFLKVIREALRKSGYTPKDIDYLAILHMK----RSAHIALLEGLGLTEE 282 (339)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECCcC----HHHHHHHHHHcCCCHH
Confidence 345688999999999999999998765532 2333568999999863
No 149
>TIGR02845 spore_V_AD stage V sporulation protein AD. Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.
Probab=78.85 E-value=16 Score=33.82 Aligned_cols=80 Identities=14% Similarity=0.213 Sum_probs=47.4
Q ss_pred hhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChh-HHHHHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHH-HHh
Q 047978 203 DNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPA-VLDQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEM-RKR 280 (320)
Q Consensus 203 ~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~-~~~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~-~~~ 280 (320)
+...++++++|+++|++++||+ ..++....+.. .-..+++.||+|. +.-++-|++...-+.++.. ++.
T Consensus 52 eLa~eAa~~ALekAGL~~~DID-~IIvGdl~~Q~~~As~vA~~LGIP~---------fdV~~ACSTf~~AL~lAa~lI~S 121 (327)
T TIGR02845 52 KLMEDAVNLALKKANLKKDDVD-FFLAGDLLNQIITANFVARDLGIPF---------LGLYGACSTSMETLALGAMLVDG 121 (327)
T ss_pred HHHHHHHHHHHHHcCCCHHHCC-EEEEeCCCCcccHHHHHHHHhCCCE---------EEEeccCHHHHHHHHHHHHHHhC
Confidence 4567888999999999999974 23333322222 2345678899753 2235666555555555433 433
Q ss_pred chhcCCCCCCCCCceEEEEeec
Q 047978 281 SVEEGKATTGEELEWGVLLGFE 302 (320)
Q Consensus 281 ~~~~g~l~~G~~~d~vll~~~G 302 (320)
|. . |++|+++..
T Consensus 122 ----G~---a---d~VLVV~Ss 133 (327)
T TIGR02845 122 ----GF---A---DRVLAATSS 133 (327)
T ss_pred ----CC---C---CEEEEEEec
Confidence 32 2 777777743
No 150
>PLN02377 3-ketoacyl-CoA synthase
Probab=78.64 E-value=6.6 Score=38.69 Aligned_cols=49 Identities=16% Similarity=0.167 Sum_probs=36.6
Q ss_pred chhHHHHHHHHhhhcCCCCCCCCceEEEEc----CCChhHHHHHHHHcCCCcchh
Q 047978 202 ADNIDKFLAESFDQVSLNDHDWNSLFWMMH----PIGPAVLDQIEGKLGLEKTKL 252 (320)
Q Consensus 202 ~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h----~~~~~~~~~~~~~lg~~~e~~ 252 (320)
.....++++++|+++|++++||+ .+|+. ++.+.+-..++++||++++-.
T Consensus 173 ~~l~~~A~~~aL~kaGi~p~dID--~LVv~cS~~~~~PSlaa~V~~~LGlr~~v~ 225 (502)
T PLN02377 173 EQVMFGALDNLFANTNVNPKDIG--ILVVNCSLFNPTPSLSAMIVNKYKLRGNIR 225 (502)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC--EEEEECCCCCCCCcHHHHHHHHhCCCCCCe
Confidence 45667888999999999999984 44442 245677788999999975543
No 151
>KOG1392 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=78.47 E-value=3.1 Score=37.46 Aligned_cols=55 Identities=16% Similarity=0.180 Sum_probs=41.6
Q ss_pred ccchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCC-CCCCCHHHHHHHHcCCCcc
Q 047978 53 VPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSG-VDMPGADYQLTKLLGLKPS 107 (320)
Q Consensus 53 ~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~-~~~p~~a~~l~~~LGl~~~ 107 (320)
+.-+.||+.+|...+|++..++.+.||.||++|.-. --....+..-+-.-|.++.
T Consensus 63 dlmphdlar~al~~ll~kt~lpke~~dyii~gtviqevktsniareaal~agfsdk 118 (465)
T KOG1392|consen 63 DLMPHDLAREALKALLEKTKLPKEQLDYIICGTVIQEVKTSNIAREAALLAGFSDK 118 (465)
T ss_pred hhchhHHHHHHHHHHHHhccCCHHHhceeeehhhHHHHhcchHHHHHHHhcCCCCC
Confidence 455789999999999999999999999999998766 3344444444444566553
No 152
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=78.46 E-value=2 Score=41.17 Aligned_cols=44 Identities=11% Similarity=0.190 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEE-EEeeCCCCCCCHHHHHHHHcC
Q 047978 60 GKEAVSKAIKEWGQPISKITHLI-SCSVSGVDMPGADYQLTKLLG 103 (320)
Q Consensus 60 a~~Aa~~aL~~ag~~~~dId~li-~~s~t~~~~p~~a~~l~~~LG 103 (320)
+.+|.+.||+++|++|+|||+|- ++|+|+.-.+.-+..|.+.+|
T Consensus 278 a~~am~~AL~~Agl~~~~idYinaHgTsT~~nD~~E~~ai~~vfg 322 (412)
T COG0304 278 AIRAMRAALADAGLTPEDIDYINAHGTSTPANDKAESLAIKRVFG 322 (412)
T ss_pred HHHHHHHHHHHcCCCHhHCCEEeCCCccCCCccHHHHHHHHHHhc
Confidence 56999999999999999999986 455566555555666777777
No 153
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=78.12 E-value=2.7 Score=39.24 Aligned_cols=48 Identities=10% Similarity=0.056 Sum_probs=36.7
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcc
Q 047978 56 VPKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPS 107 (320)
Q Consensus 56 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~ 107 (320)
....+.++++++|+++|++++|||.+++..... .....+.++||++++
T Consensus 206 ~~~~~~~~~~~~L~~~gl~~~did~~i~Hq~~~----~~~~~~~~~lgl~~e 253 (345)
T TIGR00748 206 YFHHVVTAAKGLMEKLGLTPEDFDYAVFHQPNG----KFYLVAARMLGFPKE 253 (345)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEeCCCCh----HHHHHHHHHcCCCHH
Confidence 344566899999999999999999988655333 244568999999864
No 154
>KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=77.68 E-value=3.2 Score=36.87 Aligned_cols=90 Identities=19% Similarity=0.207 Sum_probs=52.4
Q ss_pred hhhccCceEEEEeecCCC--CCCCCeeEEeccCc-eecCCCcccccccccccceechhHHHHHHHHhhhcCCCCCCCCce
Q 047978 150 AIVGDGTAALIVGACPDI--NTERPLFHIVPTAQ-TILPDSEDAIKGHFRESPLIADNIDKFLAESFDQVSLNDHDWNSL 226 (320)
Q Consensus 150 ~~~GDgAaA~ll~~~~~~--~~~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~g~~~~~~~~~i~~~l~~~g~~~~d~~~~ 226 (320)
.-..|||+|+++..++.- .-..|..+++...- ...|. +.- .- -...|+++|++.|+++.|+|
T Consensus 250 SGi~DGA~AvivAsEdavK~~NlkPLARiVays~vGcdP~--------IMG----IG-PvPAI~~vLKksGlkl~DiD-- 314 (396)
T KOG1391|consen 250 SGIADGAGAVIVASEDAVKKHNLKPLARIVAYSVVGCDPS--------IMG----IG-PVPAISGVLKKSGLKLKDID-- 314 (396)
T ss_pred ccccCCceeEEEechhHHhhcCCchhhhhheeeeeccChh--------hcc----cc-CcHHHHHHHHHcCCcccccc--
Confidence 446799999999887652 11122333332110 01111 100 01 12578899999999999974
Q ss_pred EEEEcCCChhHHHHHHHHcCCCcchhhh
Q 047978 227 FWMMHPIGPAVLDQIEGKLGLEKTKLRE 254 (320)
Q Consensus 227 ~~i~h~~~~~~~~~~~~~lg~~~e~~~~ 254 (320)
.+=.+.+...-.-.+++.|+++.+|+--
T Consensus 315 l~EvNEAFApQ~LAv~r~L~ld~sKlNV 342 (396)
T KOG1391|consen 315 LVEVNEAFAPQYLAVERSLDLDISKLNV 342 (396)
T ss_pred eEEechhhchHHHHHHHhhCCChhhccc
Confidence 4444444444445678899999888754
No 155
>PLN00415 3-ketoacyl-CoA synthase
Probab=77.64 E-value=6.9 Score=38.07 Aligned_cols=83 Identities=13% Similarity=0.173 Sum_probs=49.3
Q ss_pred hhHHHHHHHHhhhcCCCCCCCCceEEEEcC----CChhHHHHHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHH
Q 047978 203 DNIDKFLAESFDQVSLNDHDWNSLFWMMHP----IGPAVLDQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMR 278 (320)
Q Consensus 203 ~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~----~~~~~~~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~ 278 (320)
..+..+++++|+++|++++||+ ++|... +.+..-..+.+++|++++-...+ .+.+|.+.-+++|..+-
T Consensus 136 m~i~~A~~~aL~~aGi~p~dID--~LIvs~T~~~~~Pslaa~l~~~LGLr~~v~~~d------L~gmGCsggv~aL~lA~ 207 (466)
T PLN00415 136 LVIFGALNSLFKKTGIEPREVG--IFIVNCSLFNPNPSLSSMIVNRYKLKTDVKTYN------LSGMGCSAGAISVDLAT 207 (466)
T ss_pred HHHHHHHHHHHHHcCCCHHHCC--EEEEECcCCCCCchHHHHHHHHhCCCCCceEEE------eccccchHHHHHHHHHH
Confidence 4455678899999999999984 444333 23555667899999985543333 34444444444444432
Q ss_pred HhchhcCCCCCCCCCceEEEEe
Q 047978 279 KRSVEEGKATTGEELEWGVLLG 300 (320)
Q Consensus 279 ~~~~~~g~l~~G~~~d~vll~~ 300 (320)
+-. +..++ .++|+++
T Consensus 208 ~ll----~a~~~---~~aLVVs 222 (466)
T PLN00415 208 NLL----KANPN---TYAVIVS 222 (466)
T ss_pred HHH----HhCCC---CEEEEEE
Confidence 210 12355 6777665
No 156
>PLN02192 3-ketoacyl-CoA synthase
Probab=77.31 E-value=5.5 Score=39.28 Aligned_cols=84 Identities=11% Similarity=0.203 Sum_probs=51.6
Q ss_pred chhHHHHHHHHhhhcCCCCCCCCceEEEE----cCCChhHHHHHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHH
Q 047978 202 ADNIDKFLAESFDQVSLNDHDWNSLFWMM----HPIGPAVLDQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEM 277 (320)
Q Consensus 202 ~~~~~~~i~~~l~~~g~~~~d~~~~~~i~----h~~~~~~~~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~ 277 (320)
...+..+++++|+++|++++||| .+|. .++.+.+-..+++++|++.+-...+ .+-+|.++-+++|+-+
T Consensus 177 ~~~~~~Aa~~aL~kaGi~p~DID--iLIv~~S~~~~~PSlaa~I~n~lGlr~~i~afd------LsgmGCSggl~aLdlA 248 (511)
T PLN02192 177 ETVMFGAIDQLLAKTSVKPKDIG--ILIVNCSLFNPTPSLSAMVINHYKLRGNILSYN------LGGMGCSAGLISIDLA 248 (511)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC--EEEEECCCCCCCchHHHHHHHHhCCCCCceEEE------cccchhhhHHHHHHHH
Confidence 45667888999999999999985 3332 3345677788999999974433332 3434444444455443
Q ss_pred HHhchhcCCCCCCCCCceEEEEe
Q 047978 278 RKRSVEEGKATTGEELEWGVLLG 300 (320)
Q Consensus 278 ~~~~~~~g~l~~G~~~d~vll~~ 300 (320)
-.- . +..++ .++|+++
T Consensus 249 ~~l-L---~a~~~---~~aLVVs 264 (511)
T PLN02192 249 KHL-L---QVHPN---SYALVIS 264 (511)
T ss_pred HHH-H---HcCCC---CeEEEEE
Confidence 221 0 01244 6777766
No 157
>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A ....
Probab=77.04 E-value=0.77 Score=35.76 Aligned_cols=46 Identities=11% Similarity=0.156 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEeeCC-CCCCCHHHHHHHHcCCC
Q 047978 60 GKEAVSKAIKEWGQPISKITHLISCSVSG-VDMPGADYQLTKLLGLK 105 (320)
Q Consensus 60 a~~Aa~~aL~~ag~~~~dId~li~~s~t~-~~~p~~a~~l~~~LGl~ 105 (320)
..++.+++|+++|++|+|||+|....+.. ...+.-+..+.+.++-.
T Consensus 27 ~~~~i~~al~~agi~~~~I~~i~~hg~Gt~~~D~~E~~ai~~~~~~~ 73 (119)
T PF02801_consen 27 LARAIRRALADAGISPEDIDYIEAHGTGTPLGDAAEAEAIARVFGDS 73 (119)
T ss_dssp HHHHHHHHHHHHTS-GGGEEEEE----SSHHHHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHhhhccccccceeeeeeccccccchhhhhhhhhhhhccc
Confidence 37789999999999999999875333222 33344555666666643
No 158
>PLN03170 chalcone synthase; Provisional
Probab=76.93 E-value=9.3 Score=36.55 Aligned_cols=83 Identities=12% Similarity=0.004 Sum_probs=50.4
Q ss_pred hhHHHHHHHHhhhcCCCCCCCCceEE-EEcC-C--ChhHHHHHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHH
Q 047978 203 DNIDKFLAESFDQVSLNDHDWNSLFW-MMHP-I--GPAVLDQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMR 278 (320)
Q Consensus 203 ~~~~~~i~~~l~~~g~~~~d~~~~~~-i~h~-~--~~~~~~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~ 278 (320)
+.-.++.+++|+++|++++||+ ++ +... + .+.+--.++++||+++.-... + -.|++.+.-+.+|..+.
T Consensus 108 ~La~~Aa~~AL~~ag~~~~dId--~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r~----~--d~~~gC~G~~~aL~~A~ 179 (401)
T PLN03170 108 KLGKAAAQKAIKEWGQPKSKIT--HLVFCTTSGVDMPGADYQLTKMLGLRPSVNRL----M--MYQQGCFAGGTVLRVAK 179 (401)
T ss_pred HHHHHHHHHHHHHcCCCHHHCC--EEEEEccCCCCCChHHHHHHHHhCcCcccHHH----H--hhcChhHHHHHHHHHHH
Confidence 3445677888999999999984 43 2332 2 455666789999998652111 1 24566666666666554
Q ss_pred HhchhcCCCCCCCCCceEEEEe
Q 047978 279 KRSVEEGKATTGEELEWGVLLG 300 (320)
Q Consensus 279 ~~~~~~g~l~~G~~~d~vll~~ 300 (320)
+- .+ -.++ .++|+++
T Consensus 180 ~l-~~---~~~~---~~vLVV~ 194 (401)
T PLN03170 180 DL-AE---NNRG---ARVLVVC 194 (401)
T ss_pred HH-HH---cCCC---CeEEEEE
Confidence 32 10 1234 6788774
No 159
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=76.60 E-value=2.7 Score=38.75 Aligned_cols=45 Identities=11% Similarity=0.093 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcc
Q 047978 59 LGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPS 107 (320)
Q Consensus 59 la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~ 107 (320)
...++.+++|+++|++++|||++++..... .....+.++||+++.
T Consensus 227 ~~~~~i~~~L~~~g~~~~did~~~~hq~~~----~~~~~~~~~lgl~~~ 271 (326)
T CHL00203 227 QVPAVIIKCLNALNISIDEVDWFILHQANK----RILEAIANRLSVPNS 271 (326)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEECCCCH----HHHHHHHHHhCCCHH
Confidence 356778999999999999999887655332 345668999999865
No 160
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=76.04 E-value=2.6 Score=38.90 Aligned_cols=47 Identities=21% Similarity=0.277 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcc
Q 047978 57 PKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPS 107 (320)
Q Consensus 57 ~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~ 107 (320)
.....++.+++|+++|++++|||.+++...... ....++++||+++.
T Consensus 229 ~~~~~~~i~~~L~~~gl~~~did~~~~H~~~~~----~~~~i~~~l~l~~e 275 (329)
T PRK07204 229 SKYLMKFIDKLLMDAGYTLADIDLIVPHQASGP----AMRLIRKKLGVDEE 275 (329)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEeCCCCHH----HHHHHHHHcCCCHH
Confidence 344668899999999999999999876553332 34578999999865
No 161
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=75.58 E-value=11 Score=35.19 Aligned_cols=50 Identities=16% Similarity=0.257 Sum_probs=34.2
Q ss_pred chhHHHHHHHHhhhcCCCCCCCCceEEEE-cC---CChhHHHHHHHHcCCCcchhh
Q 047978 202 ADNIDKFLAESFDQVSLNDHDWNSLFWMM-HP---IGPAVLDQIEGKLGLEKTKLR 253 (320)
Q Consensus 202 ~~~~~~~i~~~l~~~g~~~~d~~~~~~i~-h~---~~~~~~~~~~~~lg~~~e~~~ 253 (320)
.+...++++.+|+++|++++||+ .+|. +. ..+..-..++++||++++...
T Consensus 86 ~~la~~Aa~~aL~~a~~~~~~Id--~li~~s~~~~~~P~~a~~i~~~lgl~~~~~~ 139 (361)
T cd00831 86 RELAEEAARGALDEAGLRPSDID--HLVVNTSTGNPTPSLDAMLINRLGLRPDVKR 139 (361)
T ss_pred HHHHHHHHHHHHHHhCCCHHHCC--EEEEECCCCCCCCCHHHHHHHHhCCCcccch
Confidence 34456788899999999999974 4433 22 233455678999999765443
No 162
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=75.56 E-value=3.3 Score=38.15 Aligned_cols=47 Identities=6% Similarity=0.079 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcc
Q 047978 57 PKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPS 107 (320)
Q Consensus 57 ~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~ 107 (320)
.+...++.+++|+++|++++|||.+++... .+..-..+.++||+++.
T Consensus 226 ~~~~~~~~~~~L~~~gl~~~did~~~~h~~----~~~~~~~~~~~l~l~~~ 272 (326)
T PRK05963 226 VRMMSGASQNVLASAAMTPQDIDRFFPHQA----NARIVDKVCETIGIPRA 272 (326)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEeCCC----CHHHHHHHHHHcCCCHH
Confidence 445577899999999999999999887332 23345678899999875
No 163
>PLN02932 3-ketoacyl-CoA synthase
Probab=75.28 E-value=7 Score=38.24 Aligned_cols=68 Identities=13% Similarity=0.205 Sum_probs=45.4
Q ss_pred chhHHHHHHHHhhhcCCCCCCCCceEEEE----cCCChhHHHHHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHH
Q 047978 202 ADNIDKFLAESFDQVSLNDHDWNSLFWMM----HPIGPAVLDQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEM 277 (320)
Q Consensus 202 ~~~~~~~i~~~l~~~g~~~~d~~~~~~i~----h~~~~~~~~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~ 277 (320)
.....++++++|+++|++++||+ .+|. ..+.+.+-..++++||++++-...+ .+-+|.+.-+++|+-+
T Consensus 149 ~~la~~Aa~~aL~~agi~p~dId--~lIv~tst~~~~Pslaa~V~~~lGlr~~i~~fd------L~gmGCSggl~aL~lA 220 (478)
T PLN02932 149 EEVIIGAVDNLFRNTGISPSDIG--ILVVNSSTFNPTPSLSSILVNKFKLRDNIKSLN------LGGMGCSAGVIAIDAA 220 (478)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC--EEEEEccCCCCCCcHHHHHHHHhCCCCCceEEE------eccchhhhHHHHHHHH
Confidence 44556788999999999999985 3322 2345667788999999975543333 3445555555555544
No 164
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=75.19 E-value=3.2 Score=38.12 Aligned_cols=45 Identities=13% Similarity=0.117 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcc
Q 047978 59 LGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPS 107 (320)
Q Consensus 59 la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~ 107 (320)
...++.+++|+++|++++|||.+++.... +.....++++||++..
T Consensus 226 ~~~~~i~~~L~~~g~~~~did~~~~h~~~----~~~~~~~~~~lg~~~~ 270 (325)
T PRK12879 226 TMPKGARQVLEKAGLTKDDIDWVIPHQAN----LRIIESLCEKLGIPME 270 (325)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEECCCC----HHHHHHHHHHcCCCHH
Confidence 34578899999999999999999866532 3345678999999864
No 165
>PLN02854 3-ketoacyl-CoA synthase
Probab=73.40 E-value=9.6 Score=37.69 Aligned_cols=68 Identities=15% Similarity=0.175 Sum_probs=43.8
Q ss_pred chhHHHHHHHHhhhcCCCCCCCCceEEEEc----CCChhHHHHHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHH
Q 047978 202 ADNIDKFLAESFDQVSLNDHDWNSLFWMMH----PIGPAVLDQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEM 277 (320)
Q Consensus 202 ~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h----~~~~~~~~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~ 277 (320)
...+-.+++++|+++|++++||+ .+|.. ++.+.+-..+++++|++.+-...+ .+-+|.+.-+++|+-+
T Consensus 189 ~~v~~~~~~~lL~kaGi~p~dID--~LIv~cS~~~p~PSlAa~I~n~LGlr~~i~afd------LsgmGCSggl~aL~lA 260 (521)
T PLN02854 189 EAVMFGALDSLFSKTGVKPRDIG--ILIVNCSLFNPTPSLSAMIVNHYKLRTDIKSYN------LGGMGCSAGLISIDLA 260 (521)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC--EEEEECCCCCCCCCHHHHHHHHhCCCCCceEEe------cccchhhhHHHHHHHH
Confidence 34556778899999999999984 44442 234667778999999975533332 3434444445555443
No 166
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....
Probab=73.14 E-value=2.4 Score=33.36 Aligned_cols=44 Identities=20% Similarity=0.225 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcc
Q 047978 60 GKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPS 107 (320)
Q Consensus 60 a~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~ 107 (320)
...|++++|+++|++++|||.+=..- .+-...-...+.||+...
T Consensus 24 p~~A~~~al~~ag~~~~did~~Ei~E----aFA~~~l~~~~~lg~~~~ 67 (123)
T PF02803_consen 24 PVPAARKALERAGLTPDDIDVIEINE----AFAAQVLAFLEALGLDPE 67 (123)
T ss_dssp HHHHHHHHHHHHT--GGGESEEEE------SBHHHHHHHHHHHTTGGG
T ss_pred HHHHHHHHHHHhCCCccccchhhccc----hhhhHHHHhhcccccccc
Confidence 46899999999999999999774432 233455677888998775
No 167
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=73.10 E-value=3.4 Score=37.79 Aligned_cols=46 Identities=17% Similarity=0.110 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcc
Q 047978 58 KLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPS 107 (320)
Q Consensus 58 ~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~ 107 (320)
+-..++.+++|+++|++++|||.+++... .+..-..++++||++.+
T Consensus 219 ~~~~~~~~~~l~~~g~~~~di~~~~~h~~----~~~~~~~~~~~lgi~~~ 264 (318)
T TIGR00747 219 RKMGDVVEETLEANGLDPEDIDWFVPHQA----NLRIIEALAKRLELDMS 264 (318)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHcCCCHH
Confidence 33567889999999999999999985442 23345678999999864
No 168
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=72.41 E-value=3.7 Score=37.95 Aligned_cols=49 Identities=12% Similarity=0.116 Sum_probs=38.3
Q ss_pred chHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcc
Q 047978 55 KVPKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPS 107 (320)
Q Consensus 55 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~ 107 (320)
.+..+..++.+++|++++++++|||.++..- .....-..++++||++..
T Consensus 220 ~av~~~~~~~~~~L~~~~l~~~dId~~vpHQ----an~ri~~~i~~~l~~~~~ 268 (323)
T COG0332 220 FAVRAMPKAIEEVLEKAGLTPEDIDWFVPHQ----ANLRIIEAIAKKLGIPEE 268 (323)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEcccc----ccHHHHHHHHHHcCCCHH
Confidence 4567889999999999999999999986332 222344678999999765
No 169
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=72.22 E-value=15 Score=33.92 Aligned_cols=51 Identities=16% Similarity=0.191 Sum_probs=35.6
Q ss_pred chhHHHHHHHHhhhcCCCCCCCCceEEEE-c----CCChhHHHHHHHHcCCCcchhhh
Q 047978 202 ADNIDKFLAESFDQVSLNDHDWNSLFWMM-H----PIGPAVLDQIEGKLGLEKTKLRE 254 (320)
Q Consensus 202 ~~~~~~~i~~~l~~~g~~~~d~~~~~~i~-h----~~~~~~~~~~~~~lg~~~e~~~~ 254 (320)
.+...++++++|+++|++++||+ .+++ + +..+.....+++.||++++....
T Consensus 62 ~~la~~Aa~~aL~~ag~~~~~Id--~li~~s~~~~~~~p~~a~~v~~~lgl~~~~~~~ 117 (338)
T PRK09258 62 SDGAIAAGRKALAEAGIDPSDIG--LLINTSVCRDYLEPATACRVHHNLGLPKSCANF 117 (338)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC--EEEEEcCCCCCCCChHHHHHHHHcCCCCCCcee
Confidence 35567888999999999999874 3333 2 23345567789999998654333
No 170
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....
Probab=72.18 E-value=12 Score=32.89 Aligned_cols=85 Identities=15% Similarity=0.176 Sum_probs=47.8
Q ss_pred hhHHHHHHHHhhhcCCCCCCCCceEEEEcC----CChhHHHHHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHH
Q 047978 203 DNIDKFLAESFDQVSLNDHDWNSLFWMMHP----IGPAVLDQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMR 278 (320)
Q Consensus 203 ~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~----~~~~~~~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~ 278 (320)
+...++++++|++.|++++||+ ++|+=. ..+.+--.+.++||++++--+.. .+-+|.+.=...|..+.
T Consensus 102 ~L~~~Aa~~AL~~~g~~~~dIt--hlv~vs~TG~~~PglD~~l~~~LgL~~~v~R~~------i~~~GC~gg~~~L~~A~ 173 (226)
T PF00195_consen 102 PLAEEAARKALAEAGLDPSDIT--HLVTVSCTGIAAPGLDARLINRLGLRPDVQRTP------IFGMGCAGGAAGLRRAK 173 (226)
T ss_dssp HHHHHHHHHHHHHHTS-GGGEC--EEEEEESSSSECS-HHHHHHHHHT--TTSEEEE------EES-GGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCcccc--eEEEEecCCcCCCchhHHHHhcCCCCCCcEEEE------EeccchhhHHHHHHHHH
Confidence 4445677788999999999863 554322 23556668899999987644433 34445444444443333
Q ss_pred HhchhcCCCCCCCCCceEEEEeec
Q 047978 279 KRSVEEGKATTGEELEWGVLLGFE 302 (320)
Q Consensus 279 ~~~~~~g~l~~G~~~d~vll~~~G 302 (320)
+- -+-.|| .+||+++.-
T Consensus 174 ~~----~~~~p~---a~VLvv~vE 190 (226)
T PF00195_consen 174 DI----ARANPG---ARVLVVCVE 190 (226)
T ss_dssp HH----HHHSTT----EEEEEEEE
T ss_pred HH----HhCCcc---ceEEEEEEE
Confidence 32 112477 899998765
No 171
>PLN03172 chalcone synthase family protein; Provisional
Probab=71.91 E-value=12 Score=35.58 Aligned_cols=85 Identities=13% Similarity=0.008 Sum_probs=52.2
Q ss_pred hhHHHHHHHHhhhcCCCCCCCCceEEE-EcC---CChhHHHHHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHH
Q 047978 203 DNIDKFLAESFDQVSLNDHDWNSLFWM-MHP---IGPAVLDQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMR 278 (320)
Q Consensus 203 ~~~~~~i~~~l~~~g~~~~d~~~~~~i-~h~---~~~~~~~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~ 278 (320)
+.-.++++.+|+++|++++||+ ++| ... ..+.+--.++++||+++.-.... ..|++.++-+..|..+.
T Consensus 104 ~La~~Aa~~aL~~ag~~~~dId--~ii~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~------~~~~gC~g~~~aL~~A~ 175 (393)
T PLN03172 104 KLGKEAAAKAIKEWGQPKSKIT--HLVFCTTSGVDMPGADYQLTKLLGLKPSVKRFM------MYQQGCFAGGTVLRLAK 175 (393)
T ss_pred HHHHHHHHHHHHHcCCCHHHCC--EEEEEccCCCcCchHHHHHHHHhCCCCCceEEe------eeCCchHHHHHHHHHHH
Confidence 4445777888999999999974 443 221 24556677899999986521110 24566666666666554
Q ss_pred HhchhcCCCCCCCCCceEEEEeec
Q 047978 279 KRSVEEGKATTGEELEWGVLLGFE 302 (320)
Q Consensus 279 ~~~~~~g~l~~G~~~d~vll~~~G 302 (320)
+-. +..++ .++|+++.-
T Consensus 176 ~~~----~~~~~---~~vLVV~~E 192 (393)
T PLN03172 176 DLA----ENNAG---SRVLVVCSE 192 (393)
T ss_pred HHH----HcCCC---CeEEEEEEe
Confidence 331 11244 678876643
No 172
>PLN03173 chalcone synthase; Provisional
Probab=71.63 E-value=13 Score=35.44 Aligned_cols=85 Identities=13% Similarity=0.010 Sum_probs=51.4
Q ss_pred hhHHHHHHHHhhhcCCCCCCCCceEEEEcC----CChhHHHHHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHH
Q 047978 203 DNIDKFLAESFDQVSLNDHDWNSLFWMMHP----IGPAVLDQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMR 278 (320)
Q Consensus 203 ~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~----~~~~~~~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~ 278 (320)
+.-.++++.+|+++|++++||+ ++|... ..+.+--.++++||++..-.... -.+++.+.-+.+|..+.
T Consensus 104 ~La~~Aa~~AL~~ag~~~~dId--~li~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~------~~~~gC~g~~~aL~~A~ 175 (391)
T PLN03173 104 KLGKEAAAKAIKEWGQPKSKIT--HLVFCTTSGVDMPGADYQLTKLLGLRSSVKRFM------MYQQGCFAGGTVLRLAK 175 (391)
T ss_pred HHHHHHHHHHHHHcCCCHHHCC--EEEEEccCCCcccHHHHHHHHHhCCCccceeee------hhcCccHHHHHHHHHHH
Confidence 4445778889999999999974 443322 23556667899999986521110 24556666666666554
Q ss_pred HhchhcCCCCCCCCCceEEEEeec
Q 047978 279 KRSVEEGKATTGEELEWGVLLGFE 302 (320)
Q Consensus 279 ~~~~~~g~l~~G~~~d~vll~~~G 302 (320)
+-. +..++ .+||+++.-
T Consensus 176 ~~~----~~~~~---~~vLVV~~E 192 (391)
T PLN03173 176 DLA----ENNKG---ARVLVVCSE 192 (391)
T ss_pred HHH----HhCCC---CeEEEEEEe
Confidence 321 11345 778877533
No 173
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=71.25 E-value=4.4 Score=38.38 Aligned_cols=46 Identities=15% Similarity=0.233 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcc
Q 047978 58 KLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPS 107 (320)
Q Consensus 58 ~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~ 107 (320)
....++.+++|+++|++++|||.++...... ..-..++++||+++.
T Consensus 280 ~~~~~~i~~~L~~~gl~~~dId~~v~Hq~n~----~~~~~~~~~Lgl~~e 325 (379)
T PLN02326 280 RCVPQVIESALQKAGLTAESIDWLLLHQANQ----RIIDAVAQRLGIPPE 325 (379)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECCCCH----HHHHHHHHHcCCCHH
Confidence 3456788999999999999999887655332 234568999999875
No 174
>PRK09585 anmK anhydro-N-acetylmuramic acid kinase; Reviewed
Probab=70.33 E-value=9.1 Score=36.07 Aligned_cols=52 Identities=23% Similarity=0.238 Sum_probs=40.5
Q ss_pred chHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCC--------HHHHHHHHcCCCc
Q 047978 55 KVPKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPG--------ADYQLTKLLGLKP 106 (320)
Q Consensus 55 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~--------~a~~l~~~LGl~~ 106 (320)
....+-.+|++++|+++++++++||+|=....|-++.|. ....|++++|++-
T Consensus 68 ~lg~~~a~av~~~~~~~~l~~~~id~IgsHGQTv~H~P~~~~TlQiG~~~~iA~~tgi~V 127 (365)
T PRK09585 68 ALGRLFAEAVNALLAEAGLSPEDIDAIGSHGQTVRHRPGEGFTLQIGDGALIAELTGITV 127 (365)
T ss_pred HHHHHHHHHHHHHHHHcCCCccCccEEEeCCcccccCCCCCCeEEcCCHHHHHHHHCcCE
Confidence 345667899999999999999999987555555566663 5678899998873
No 175
>PLN03168 chalcone synthase; Provisional
Probab=69.64 E-value=14 Score=35.27 Aligned_cols=84 Identities=12% Similarity=0.028 Sum_probs=52.2
Q ss_pred hhHHHHHHHHhhhcCCCCCCCCceEEEEcCC----ChhHHHHHHHHcCCCcchh-hhhHHHHhccCCcccchHHHHHHHH
Q 047978 203 DNIDKFLAESFDQVSLNDHDWNSLFWMMHPI----GPAVLDQIEGKLGLEKTKL-RETRHVLSEYGNMASATVLFVLDEM 277 (320)
Q Consensus 203 ~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~----~~~~~~~~~~~lg~~~e~~-~~~~~~~~~~Gn~~sasi~~~L~~~ 277 (320)
+.-.++.+.+|+++|++++||+ ++|+-.. .+.+--.++++||+++.-. .+ -.|++.+.-+.+|..+
T Consensus 103 ~La~~Aa~~AL~~ag~~~~dId--~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r~~-------d~~~gC~g~~~aL~~A 173 (389)
T PLN03168 103 KLAAEAAQKAIKEWGGRKSDIT--HIVFATTSGVNMPGADHALAKLLGLKPTVKRVM-------MYQTGCFGGASVLRVA 173 (389)
T ss_pred HHHHHHHHHHHHHcCCCHHHCC--EEEEECCCCCCCccHHHHHHHHhCcCCcceeee-------eeCCccHHHHHHHHHH
Confidence 4445777888999999999974 5544432 3455667899999976421 11 2456666666666555
Q ss_pred HHhchhcCCCCCCCCCceEEEEeec
Q 047978 278 RKRSVEEGKATTGEELEWGVLLGFE 302 (320)
Q Consensus 278 ~~~~~~~g~l~~G~~~d~vll~~~G 302 (320)
..-. +-.++ .+||+++.-
T Consensus 174 ~~~i----~~~~~---~~VLVV~~E 191 (389)
T PLN03168 174 KDLA----ENNKG---ARVLAVASE 191 (389)
T ss_pred HHHH----HhCCC---CEEEEEEEe
Confidence 3321 01244 778877643
No 176
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=69.39 E-value=7.2 Score=36.49 Aligned_cols=23 Identities=22% Similarity=0.224 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEE
Q 047978 60 GKEAVSKAIKEWGQPISKITHLI 82 (320)
Q Consensus 60 a~~Aa~~aL~~ag~~~~dId~li 82 (320)
..+|.+++|+++|++|+|||+|+
T Consensus 236 l~~ai~~AL~~agl~~~dId~v~ 258 (348)
T PRK06147 236 LTQAIRAALAEAGCGLEDMDYRI 258 (348)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEE
Confidence 56899999999999999999876
No 177
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=66.82 E-value=7.3 Score=36.62 Aligned_cols=44 Identities=18% Similarity=0.058 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCc
Q 047978 59 LGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKP 106 (320)
Q Consensus 59 la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~ 106 (320)
-...|++++|+++|++++|||++-+..+ ++.......+.||+.+
T Consensus 252 ~~~~a~~~al~~Agl~~~did~~ei~d~----F~~~~l~~~e~lGl~~ 295 (375)
T cd00829 252 AARLAARRAYKMAGITPDDIDVAELYDC----FTIAELLALEDLGFCE 295 (375)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEecCc----ChHHHHHHHHHcCCCC
Confidence 3568999999999999999998755543 4445566778888765
No 178
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=66.37 E-value=7.9 Score=36.98 Aligned_cols=47 Identities=15% Similarity=0.070 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEE-EeeCCCCCCCHHHHHHHHcCCC
Q 047978 58 KLGKEAVSKAIKEWGQPISKITHLIS-CSVSGVDMPGADYQLTKLLGLK 105 (320)
Q Consensus 58 ~la~~Aa~~aL~~ag~~~~dId~li~-~s~t~~~~p~~a~~l~~~LGl~ 105 (320)
.-..+|.++||+++|+ ++|||+|.. +|.|+.-...-...|.+.++.+
T Consensus 280 ~~~~~am~~AL~~Agl-~~~IdyI~ahgtgT~~~D~~E~~Ai~~~f~~p 327 (398)
T PRK06519 280 GDLEASLERLLKPAGG-LAAPTAVISGATGAHPATAEEKAALEAALAGP 327 (398)
T ss_pred HHHHHHHHHHHHHCCC-cccCCEEEeCCCCCCCccHHHHHHHHHHcCCC
Confidence 3457899999999999 899998752 3333433444556677777743
No 179
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=66.20 E-value=6.8 Score=36.52 Aligned_cols=44 Identities=14% Similarity=0.213 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEE-EEeeCCCCCCCHHHHHHHHcC
Q 047978 60 GKEAVSKAIKEWGQPISKITHLI-SCSVSGVDMPGADYQLTKLLG 103 (320)
Q Consensus 60 a~~Aa~~aL~~ag~~~~dId~li-~~s~t~~~~p~~a~~l~~~LG 103 (320)
|..|.++||+++|+.|+|||.|= ++|+|+--.-.-+..|.+.++
T Consensus 303 a~~am~raL~~Agl~pe~i~YvNAHATST~~GD~aE~~Ai~~vf~ 347 (440)
T KOG1394|consen 303 AVLAMERALKDAGLSPEDIDYVNAHATSTPLGDAAEAEAIKRVFG 347 (440)
T ss_pred HHHHHHHHHHHcCCChhhcCeeecccccCcCchHHHHHHHHHHhc
Confidence 67788999999999999999884 566666212223344555544
No 180
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional
Probab=66.06 E-value=6 Score=36.98 Aligned_cols=48 Identities=19% Similarity=0.203 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCEEE-EEeeCCCCCCCHHHHHHHHcCC
Q 047978 57 PKLGKEAVSKAIKEWGQPISKITHLI-SCSVSGVDMPGADYQLTKLLGL 104 (320)
Q Consensus 57 ~~la~~Aa~~aL~~ag~~~~dId~li-~~s~t~~~~p~~a~~l~~~LGl 104 (320)
..-..+|.++||+++|++|+|||+|- +.+.|+.-.+.-...|++.+|-
T Consensus 205 ~~~~~~ai~~AL~~Agl~p~dIdyIeaHgtgT~~~D~~E~~Ai~~~fg~ 253 (342)
T PRK14691 205 GDGAYRAMKIALRQAGITPEQVQHLNAHATSTPVGDLGEINAIKHLFGE 253 (342)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEecCCCCcCCCHHHHHHHHHHhCC
Confidence 44567899999999999999999764 2233334455556777877774
No 181
>PLN03169 chalcone synthase family protein; Provisional
Probab=65.50 E-value=20 Score=34.20 Aligned_cols=84 Identities=10% Similarity=-0.084 Sum_probs=49.2
Q ss_pred hhHHHHHHHHhhhcCCCCCCCCceEEEEcC---CChhHHHHHHHHcCCCcchh-hhhHHHHhccCCcccchHHHHHHHHH
Q 047978 203 DNIDKFLAESFDQVSLNDHDWNSLFWMMHP---IGPAVLDQIEGKLGLEKTKL-RETRHVLSEYGNMASATVLFVLDEMR 278 (320)
Q Consensus 203 ~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~---~~~~~~~~~~~~lg~~~e~~-~~~~~~~~~~Gn~~sasi~~~L~~~~ 278 (320)
..-.++.+.+|+++|++++||+ ..++... ..+..--.++++||+++.-. ... -+++.++-+.+|..+.
T Consensus 108 ~La~~Aa~~aL~~ag~~~~dId-~lI~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~d-------~~~gC~g~~~aL~~A~ 179 (391)
T PLN03169 108 QMAVEASLACIKEWGRPVSDIT-HLVYVSSSEARLPGGDLYLAKQLGLSPDVQRVML-------YFLGCSGGVAGLRVAK 179 (391)
T ss_pred HHHHHHHHHHHHHhCCCHHHCC-EEEEECcCCCCCCcHHHHHHHHhCcCCcceeeec-------ccChhHHHHHHHHHHH
Confidence 4445778899999999999984 2233333 34555567899999986532 121 2345555555655543
Q ss_pred HhchhcCCCCCCCCCceEEEEee
Q 047978 279 KRSVEEGKATTGEELEWGVLLGF 301 (320)
Q Consensus 279 ~~~~~~g~l~~G~~~d~vll~~~ 301 (320)
.-.. -.++ .++|+++.
T Consensus 180 ~~~~----~~~~---~~vLvv~~ 195 (391)
T PLN03169 180 DIAE----NNPG---SRVLLTTS 195 (391)
T ss_pred HHHH----hCCC---CeEEEEEE
Confidence 3210 1233 67777653
No 182
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=65.42 E-value=5.6 Score=38.18 Aligned_cols=46 Identities=15% Similarity=0.082 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHcCCCCCCcCEEE-EEeeCCCCCCCHHHHHHHHcCC
Q 047978 59 LGKEAVSKAIKEWGQPISKITHLI-SCSVSGVDMPGADYQLTKLLGL 104 (320)
Q Consensus 59 la~~Aa~~aL~~ag~~~~dId~li-~~s~t~~~~p~~a~~l~~~LGl 104 (320)
-..+|.+++|+++|++|+|||+|- +++.|+.-.+.-+..|.+.+|-
T Consensus 279 ~~~~a~~~Al~~agi~~~did~ie~hgtgt~~~D~~E~~al~~~fg~ 325 (414)
T PRK08722 279 GGALAMEAAMRDAGVTGEQIGYVNAHGTSTPAGDVAEIKGIKRALGE 325 (414)
T ss_pred HHHHHHHHHHHHcCCCHHHcCEEEccCccCCCCCHHHHHHHHHHhcc
Confidence 357889999999999999999873 4444444445556667777763
No 183
>PRK04262 hypothetical protein; Provisional
Probab=65.03 E-value=6.5 Score=36.64 Aligned_cols=46 Identities=15% Similarity=0.086 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcc
Q 047978 58 KLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPS 107 (320)
Q Consensus 58 ~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~ 107 (320)
....++.+++|+++|++++|||.+++... .+..-..++++||++..
T Consensus 209 ~~~~~~i~~~L~~~gl~~~dId~~v~Hq~----n~~~~~~~~~~Lgl~~e 254 (347)
T PRK04262 209 KHIISAAKGLMEKLGLKPSDYDYAVFHQP----NGKFPLRVAKMLGFTKE 254 (347)
T ss_pred HHHHHHHHHHHHHhCcCHHHhceeecCCC----chHHHHHHHHHcCCCHH
Confidence 45778899999999999999998876532 22344568889999864
No 184
>KOG1794 consensus N-Acetylglucosamine kinase [Carbohydrate transport and metabolism]
Probab=64.98 E-value=17 Score=33.04 Aligned_cols=117 Identities=13% Similarity=0.107 Sum_probs=66.1
Q ss_pred HhhhcccchHHHHHHHHHHHHHHcCCCCCC-cCEEEEEeeCCCCCCC----HHHHHHHHcCC-Cc------chhhhhhh-
Q 047978 48 RMYILVPKVPKLGKEAVSKAIKEWGQPISK-ITHLISCSVSGVDMPG----ADYQLTKLLGL-KP------SVKRVMLT- 114 (320)
Q Consensus 48 ~~~~~~e~~~~la~~Aa~~aL~~ag~~~~d-Id~li~~s~t~~~~p~----~a~~l~~~LGl-~~------~~c~~~l~- 114 (320)
||....+...+=..++.++|+.++|+++++ +..|.+ +.++---|. .-.++..++.- .. ++-.++.+
T Consensus 37 h~~ig~~~~~~rie~~i~~A~~k~g~d~~~~lr~lgL-~lSg~d~e~~~~~lv~~~R~~fps~ae~~~v~sDa~~sl~a~ 115 (336)
T KOG1794|consen 37 HWLIGSTTCASRIEDMIREAKEKAGWDKKGPLRSLGL-GLSGTDQEDKNRKLVTEFRDKFPSVAENFYVTSDADGSLAAA 115 (336)
T ss_pred cccCCchHHHHHHHHHHHHHHhhcCCCccCccceeee-ecccCCchhHHHHHHHHHHHhccchhheeeeehhHHHHHhhc
Confidence 344444445555677889999999999999 776643 333311122 22233333221 11 11001111
Q ss_pred hhcCCCCeEEEEEeecccccccCCCCCCchhhhhhhhhccCceEEEEeecCC
Q 047978 115 AESNAGARVLVVCSEITVGTFRAPSDENLSCLVNRAIVGDGTAALIVGACPD 166 (320)
Q Consensus 115 l~~~~~~~~LVv~~e~~s~~~~~~~~~~~~~~~~~~~~GDgAaA~ll~~~~~ 166 (320)
...+...-||+-+.....+ ..+|+......-......||++.|..+.+..-
T Consensus 116 t~g~~~GiVLiaGTgs~cr-l~~~DGs~~~~ggwg~~iGd~GSaywia~~Av 166 (336)
T KOG1794|consen 116 TPGGEGGIVLIAGTGSNCR-LVNPDGSEKGAGGWGHMIGDGGSAYWIARQAV 166 (336)
T ss_pred CCCCCCcEEEEecCCceeE-EECCCCCccCCCCCCCccCCCcchhhhhhhhh
Confidence 1223567788877777765 56665433334456778999999999888764
No 185
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=64.75 E-value=8.8 Score=36.66 Aligned_cols=43 Identities=16% Similarity=0.221 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCc
Q 047978 60 GKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKP 106 (320)
Q Consensus 60 a~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~ 106 (320)
...|+++|++++|++++|||.+-+.- .++.....-.+.||+.+
T Consensus 278 ~~~aa~~a~~~Agi~~~Didv~el~D----~fa~~~l~~le~lGl~~ 320 (403)
T PRK06289 278 VRQAVLDAYRRAGVGLDDLDGFEVHD----CFTPSEYLAIDHIGLTG 320 (403)
T ss_pred HHHHHHHHHHHcCCCHHHCeEEeeec----cchHHHHHHHHHcCCCC
Confidence 56799999999999999999875443 34445566778888864
No 186
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=64.47 E-value=7.4 Score=36.48 Aligned_cols=47 Identities=6% Similarity=-0.084 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcc
Q 047978 57 PKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPS 107 (320)
Q Consensus 57 ~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~ 107 (320)
.....++.+++|+++|++++|||.+++..... ..-..+.++||+++.
T Consensus 241 ~~~~~~~i~~~L~~~gl~~~did~~v~HQ~~~----~i~~~i~~~Lgl~~e 287 (353)
T PRK12880 241 LECEPKSFKEILEFSKVDEKDIAFHLFHQSNA----YLVDCIKEELKLNDD 287 (353)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEECCCCH----HHHHHHHHHhCCCHH
Confidence 34456788999999999999999998654322 344678899999875
No 187
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=63.78 E-value=5.9 Score=38.10 Aligned_cols=46 Identities=20% Similarity=0.190 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHcCCCCCCcCEEE-EEeeCCCCCCCHHHHHHHHcCC
Q 047978 59 LGKEAVSKAIKEWGQPISKITHLI-SCSVSGVDMPGADYQLTKLLGL 104 (320)
Q Consensus 59 la~~Aa~~aL~~ag~~~~dId~li-~~s~t~~~~p~~a~~l~~~LGl 104 (320)
-..+|.++||+++|++|+|||+|- +++.|+.-.+.-...|++.+|-
T Consensus 287 ~~~~a~~~Al~~agi~~~did~ie~hgtgt~~~D~~E~~Al~~~fg~ 333 (418)
T PRK07910 287 RAGHAMTRAIELAGLTPGDIDHVNAHATGTSVGDVAEGKAINNALGG 333 (418)
T ss_pred HHHHHHHHHHHHhCCCHHHCCEEEcCCcCCCCCCHHHHHHHHHHhCC
Confidence 367899999999999999999874 3344444455566778888874
No 188
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=63.62 E-value=64 Score=35.40 Aligned_cols=241 Identities=18% Similarity=0.206 Sum_probs=126.2
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCE-----EEEEeeCC--CC---CCCH---------H-HHHHHHc----CCCc------
Q 047978 57 PKLGKEAVSKAIKEWGQPISKITH-----LISCSVSG--VD---MPGA---------D-YQLTKLL----GLKP------ 106 (320)
Q Consensus 57 ~~la~~Aa~~aL~~ag~~~~dId~-----li~~s~t~--~~---~p~~---------a-~~l~~~L----Gl~~------ 106 (320)
.-|-.+|.-+|+=++|++|.++.. .+-||.+. .. .|.+ + ++.++++ .+..
T Consensus 88 ~RlLLE~t~EAivDaGiNP~~LRGs~tGv~vg~s~seTs~~~~~dp~t~~Gy~mtgc~raMfaNRiSytFDfqGPS~s~D 167 (2376)
T KOG1202|consen 88 LRLLLEATWEAIVDAGINPDDLRGSRTGVFVGVSGSETSGALSQDPDTVNGYSMTGCVRAMFANRISYTFDFQGPSFSVD 167 (2376)
T ss_pred HHHHHHHHHHHHHhCCCChhhcCcccceeEEeecCccccccccCCCccccceeecccHHHHhhcceeEEEeccCCchhhh
Confidence 568899999999999999988653 34443332 11 2211 0 1122221 1111
Q ss_pred chhhhhhh--------hhcCCCCeEEEEEeeccccc----------ccCCCCC--CchhhhhhhhhccCceEEEEeecCC
Q 047978 107 SVKRVMLT--------AESNAGARVLVVCSEITVGT----------FRAPSDE--NLSCLVNRAIVGDGTAALIVGACPD 166 (320)
Q Consensus 107 ~~c~~~l~--------l~~~~~~~~LVv~~e~~s~~----------~~~~~~~--~~~~~~~~~~~GDgAaA~ll~~~~~ 166 (320)
.+|++.+. ++++.++.+||-++...-+. ...|+.. ..+.-.+++-=+||.+|++|.+...
T Consensus 168 tacsSsl~al~~a~~~~r~gqcd~AiVaG~~liLkPt~slQFlRLgmls~dGsCkaFDeagnGY~Rseg~~avllqrk~~ 247 (2376)
T KOG1202|consen 168 TACSSSLMALQNAFQDIRSGQCDAAIVAGANLILKPTTSLQFLRLGMLSPDGSCKAFDEAGNGYCRSEGVVAVLLQRKSL 247 (2376)
T ss_pred hhhHHHHHHHHHHHHhhhccCCchhhhcccceEeccchhhHHHHhcCcCCCCcccchhccCCceeecCceEEEEEehhHH
Confidence 02554332 67788999998887765321 1112110 0111233455579999999988765
Q ss_pred CCCCCCeeEEeccCceecCCCcccccccccccc--e-echhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhH-----H
Q 047978 167 INTERPLFHIVPTAQTILPDSEDAIKGHFRESP--L-IADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAV-----L 238 (320)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g--~-~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~-----~ 238 (320)
.. +-+..+....+ .++ -+++.| | .-+.-.+.+++.-.++|++|+++ .|+=.|-.+.++ .
T Consensus 248 Ar--RvYAtilnart----NTD-----GfKEqGvTfP~G~~Q~qLi~e~Yse~Gl~P~sv--~YvEAHGtGTkVGDpQEa 314 (2376)
T KOG1202|consen 248 AR--RVYATILNART----NTD-----GFKEQGVTFPSGDMQEQLIRETYSEAGLNPESV--VYVEAHGTGTKVGDPQEA 314 (2376)
T ss_pred HH--HHHHHhhcccc----CCC-----chhhcCccCCCcHHHHHHHHHHHHhcCCCcccE--EEEEeccCCCCCCChHHh
Confidence 31 00111111111 111 123333 1 12334467888899999999985 477777755433 2
Q ss_pred HHHHHHcCCCcc--hhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCC----------------------------
Q 047978 239 DQIEGKLGLEKT--KLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKAT---------------------------- 288 (320)
Q Consensus 239 ~~~~~~lg~~~e--~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~---------------------------- 288 (320)
..+.+.+--++. -++-+ +-.+.||.-.||=..+|+..+-. +++|.+.
T Consensus 315 N~it~~fC~~Rt~pLLIGS--vKSNMGHaEPASGv~alaKills-mE~glip~NLHy~tPNp~ip~L~dGrLkVVd~~lp 391 (2376)
T KOG1202|consen 315 NGITRFFCATRTTPLLIGS--VKSNMGHAEPASGVCALAKILLS-MEEGLIPPNLHYNTPNPEIPALVDGRLKVVDRPLP 391 (2376)
T ss_pred hhHHHHHhhcCCCceEeee--ccccCCCCCccchHHHHHHHHHH-HHhCcCCCccccCCCCCCcchhccceeEEecCCCC
Confidence 223333322211 11112 33446777677766666665432 1124332
Q ss_pred -CCCCCceEEEEeeccchhhhheeeeecc
Q 047978 289 -TGEELEWGVLLGFEAGLTVEAIVLRSIP 316 (320)
Q Consensus 289 -~G~~~d~vll~~~G~G~~~~a~~l~~~~ 316 (320)
+| ..|-+=|||-|.+-.-+++|..+
T Consensus 392 ~~G---GivGiNSFGFGGsN~HviLks~~ 417 (2376)
T KOG1202|consen 392 WRG---GIVGINSFGFGGSNAHVILKSNT 417 (2376)
T ss_pred ccC---ceeeeeccccCCCceeEEeccCC
Confidence 45 56777889988777777777653
No 189
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=62.18 E-value=6.2 Score=37.75 Aligned_cols=47 Identities=13% Similarity=0.063 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEE-EEeeCCCCCCCHHHHHHHHcCC
Q 047978 58 KLGKEAVSKAIKEWGQPISKITHLI-SCSVSGVDMPGADYQLTKLLGL 104 (320)
Q Consensus 58 ~la~~Aa~~aL~~ag~~~~dId~li-~~s~t~~~~p~~a~~l~~~LGl 104 (320)
+-..++.+++|++++++|+|||+|. ++|.|+.-.+.-+..|++.+|-
T Consensus 275 ~~~~~ai~~AL~~Agi~p~dId~I~~Hgtgt~~~D~~E~~Ai~~~fg~ 322 (405)
T PRK09116 275 ETMQIAMELALKDAGLAPEDIGYVNAHGTATDRGDIAESQATAAVFGA 322 (405)
T ss_pred HHHHHHHHHHHHHhCCCHHHcCEEECcCccCCCCCHHHHHHHHHHhCC
Confidence 3456899999999999999999885 4444554445566677887773
No 190
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=61.70 E-value=10 Score=35.97 Aligned_cols=45 Identities=16% Similarity=0.224 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCc
Q 047978 58 KLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKP 106 (320)
Q Consensus 58 ~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~ 106 (320)
.-...|++++++++|++|+|||++-..- .++.......+.||+.+
T Consensus 260 ~~~~~a~~~a~~~agl~~~did~~e~~d----~f~~~~~~~~e~lg~~~ 304 (389)
T PRK07516 260 EGPRRAWQRALAQAGVTLDDLSFVETHD----CFTIAELIEYEAMGLAP 304 (389)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEec----CCCHHHHHHHHHcCCCC
Confidence 3355799999999999999999875443 23344556677888764
No 191
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=61.37 E-value=10 Score=35.97 Aligned_cols=43 Identities=14% Similarity=-0.026 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCc
Q 047978 60 GKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKP 106 (320)
Q Consensus 60 a~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~ 106 (320)
...|++++|+++|++|+|||.+-... .++.......+.||+.+
T Consensus 259 ~~~a~~~al~~Agi~~~DiD~~ei~d----~ft~~~l~~le~lGl~~ 301 (385)
T PRK12578 259 TQLAARQAYNMAKVTPNDIEVATVHD----AFTIAEIMGYEDLGFTE 301 (385)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecC----cChHHHHHHHHHcCCCC
Confidence 45799999999999999999864333 23344555677888754
No 192
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=60.94 E-value=6.6 Score=37.68 Aligned_cols=46 Identities=22% Similarity=0.322 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEE-EEeeCCCCCCCHHHHHHHHcC
Q 047978 58 KLGKEAVSKAIKEWGQPISKITHLI-SCSVSGVDMPGADYQLTKLLG 103 (320)
Q Consensus 58 ~la~~Aa~~aL~~ag~~~~dId~li-~~s~t~~~~p~~a~~l~~~LG 103 (320)
.-..+|.++||+++|++|+|||+|- +++.|+.-.+.-...+++.+|
T Consensus 288 ~~~~~a~~~Al~~Agi~p~dId~i~~hgtgt~~~D~~E~~al~~~fg 334 (424)
T PRK06333 288 EGARRAMLIALRQAGIPPEEVQHLNAHATSTPVGDLGEVAAIKKVFG 334 (424)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEeccCCCCccchHHHHHHHHHHhC
Confidence 3467899999999999999999874 333333333344566777776
No 193
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=60.86 E-value=31 Score=32.54 Aligned_cols=45 Identities=16% Similarity=0.067 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCC
Q 047978 57 PKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLK 105 (320)
Q Consensus 57 ~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~ 105 (320)
..-...|+++.+++.|+.++|.|.++|.+ +.|-....+++.|+.+
T Consensus 208 ~~~~~~a~~~~~~k~gls~~dfdy~vfH~----P~~k~~~ka~k~l~~~ 252 (377)
T COG3425 208 FKHVENAAKGYMEKTGLSPDDFDYIVFHQ----PNGKFPKKAAKSLGFK 252 (377)
T ss_pred HHHHHHHHHHHHHHhCCChhhhCeEEecC----CCCchHHHHHHHhCcc
Confidence 44568899999999999999999999877 5566677888888877
No 194
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=59.66 E-value=39 Score=31.99 Aligned_cols=46 Identities=15% Similarity=0.149 Sum_probs=31.3
Q ss_pred chhHHHHHHHHhhhcCCCCCCCCceEEEEcCC-----ChhHHHHHHHHcCCCc
Q 047978 202 ADNIDKFLAESFDQVSLNDHDWNSLFWMMHPI-----GPAVLDQIEGKLGLEK 249 (320)
Q Consensus 202 ~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~-----~~~~~~~~~~~lg~~~ 249 (320)
.+...++++++|+++|++++||| .+++.+. .......++..+|++.
T Consensus 23 ~~La~~A~~~AL~dAgl~~~dID--~vi~~~~~~~~~~~~~a~~v~~~lGl~~ 73 (386)
T cd00751 23 DDLGAAVIKALLERAGLDPEEVD--DVIMGNVLQAGEGQNPARQAALLAGLPE 73 (386)
T ss_pred HHHHHHHHHHHHHhcCCCHHHCC--EEEEEeccCCCCCChHHHHHHHHcCCCC
Confidence 45566788999999999999984 3433221 2333445788899975
No 195
>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=59.51 E-value=32 Score=31.58 Aligned_cols=86 Identities=17% Similarity=0.154 Sum_probs=51.4
Q ss_pred hhHHHHHHHHhhhcCCCCCCCCceEEEEcC--CChhHHHHHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHHh
Q 047978 203 DNIDKFLAESFDQVSLNDHDWNSLFWMMHP--IGPAVLDQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKR 280 (320)
Q Consensus 203 ~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~--~~~~~~~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~ 280 (320)
....++.+++|+..++.++||+.+.++--. ..+.+--.+.++||+++..-+.. + +-+|.+.-.-.|+++.+-
T Consensus 78 ~l~v~a~r~aL~~~~l~pedId~vv~vtsTG~~~Ps~dari~~~Lgl~p~~~Rvp---v---~glGCaaga~glara~~y 151 (356)
T COG3424 78 PLGVDALRRALDGSPLRPEDIDAVVTVTSTGLATPSLDARIVGELGLSPDTRRVP---V---WGLGCAAGAAGLARARDY 151 (356)
T ss_pred HHHHHHHHHHhccCCCCHHHCcEEEEEeeccccCCChhHHHHhhcCCCCccceee---e---ecchhhhhhhHHHHHHHH
Confidence 444577889999999999998522222222 23456677899999998744332 2 334444444455555444
Q ss_pred chhcCCCCCCCCCceEEEEee
Q 047978 281 SVEEGKATTGEELEWGVLLGF 301 (320)
Q Consensus 281 ~~~~g~l~~G~~~d~vll~~~ 301 (320)
=+..|- .+++++++
T Consensus 152 ----~ra~P~---~~vlvV~v 165 (356)
T COG3424 152 ----CRAAPD---ANVLVVCV 165 (356)
T ss_pred ----HhhCcc---ceEEEEEe
Confidence 223454 67777654
No 196
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=58.83 E-value=9.5 Score=36.18 Aligned_cols=45 Identities=11% Similarity=0.157 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEE-EEeeCCCCCCCHHHHHHHHcCC
Q 047978 60 GKEAVSKAIKEWGQPISKITHLI-SCSVSGVDMPGADYQLTKLLGL 104 (320)
Q Consensus 60 a~~Aa~~aL~~ag~~~~dId~li-~~s~t~~~~p~~a~~l~~~LGl 104 (320)
..+|+++||+++|++++|||++. +.+.|+...+.-...+.+.+|-
T Consensus 277 ~~~ai~~Al~~Agi~~~dId~ve~h~tgt~~~D~~E~~a~~~~~~~ 322 (407)
T TIGR03150 277 AARAMRAALKDAGINPEDVDYINAHGTSTPLGDKAETKAIKRVFGD 322 (407)
T ss_pred HHHHHHHHHHHcCCCHhHCCEEeCcCCCCCCCCHHHHHHHHHHhcc
Confidence 56899999999999999999874 3333434445555667777764
No 197
>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A.
Probab=58.62 E-value=18 Score=33.14 Aligned_cols=82 Identities=12% Similarity=0.174 Sum_probs=49.6
Q ss_pred chhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHH-HHHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHHh
Q 047978 202 ADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVL-DQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKR 280 (320)
Q Consensus 202 ~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~-~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~ 280 (320)
.+.+.++++.+|++++++++||+ ..+.---.|.-+- ...++.|++|- +.-||-|++..--+.|+.++=+
T Consensus 52 ~~m~~~A~~~al~Ka~l~~~dId-~~~aGDLlnQ~i~s~f~ar~l~iPf---------~GlygACST~~e~l~laa~~vd 121 (329)
T PF07451_consen 52 SKMQKEAVELALKKAGLKKEDID-YLFAGDLLNQIISSSFAARDLGIPF---------LGLYGACSTMMESLALAAMLVD 121 (329)
T ss_dssp HHHHHHHHHHHHHHTT--GGG-S-EEEEEETTCCCCHHHHHHHHHT--E---------EEB--CCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHCe-EEEehhhhhhhHHHHHHHHhcCCCc---------cchhhHHHHHHHHHHHHHHHHh
Confidence 35667888999999999999973 2343333343333 34568888872 5569999999888999888766
Q ss_pred chhcCCCCCCCCCceEEEEeec
Q 047978 281 SVEEGKATTGEELEWGVLLGFE 302 (320)
Q Consensus 281 ~~~~g~l~~G~~~d~vll~~~G 302 (320)
+... ++++.....
T Consensus 122 ----gg~a-----~~vla~tSS 134 (329)
T PF07451_consen 122 ----GGFA-----DYVLAATSS 134 (329)
T ss_dssp ----TTS------SEEEEEEEE
T ss_pred ----CCCc-----ceEEEEecc
Confidence 4332 666655433
No 198
>PRK08256 lipid-transfer protein; Provisional
Probab=58.11 E-value=12 Score=35.61 Aligned_cols=44 Identities=16% Similarity=0.157 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcc
Q 047978 60 GKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPS 107 (320)
Q Consensus 60 a~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~ 107 (320)
...|++++++++|++++|||.+-..- .++.......+.||+.+.
T Consensus 266 ~~~a~~~a~~~ag~~~~DiD~~ei~d----~f~~~~l~~le~lg~~~~ 309 (391)
T PRK08256 266 TRAAAQQVYEQAGIGPEDIDVVELHD----CFSANELLTYEALGLCPE 309 (391)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEeecc----CCcHHHHHHHHHcCCCCC
Confidence 46799999999999999999875433 344455666788888754
No 199
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=57.98 E-value=9.3 Score=36.26 Aligned_cols=47 Identities=11% Similarity=0.101 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCEEE-EEeeCCCCCCCHHHHHHHHcC
Q 047978 57 PKLGKEAVSKAIKEWGQPISKITHLI-SCSVSGVDMPGADYQLTKLLG 103 (320)
Q Consensus 57 ~~la~~Aa~~aL~~ag~~~~dId~li-~~s~t~~~~p~~a~~l~~~LG 103 (320)
.....+|.+++|+++|++|+|||+|- ++|.|+...+.-...|++.+|
T Consensus 253 ~~~~~~ai~~Al~~agi~p~dId~i~~hgtgt~~~D~~E~~al~~~fg 300 (381)
T PRK05952 253 GKSAIAAIQQCLARSGLTPEDIDYIHAHGTATRLNDQREANLIQALFP 300 (381)
T ss_pred HHHHHHHHHHHHHHhCCCHHHeeEEEccCCCCCCCcHHHHHHHHHHcC
Confidence 34578999999999999999999875 334444333444455666665
No 200
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=57.87 E-value=59 Score=28.22 Aligned_cols=44 Identities=9% Similarity=-0.017 Sum_probs=30.8
Q ss_pred hhHHHHHHHHhhhcCCCCCCCCceEEEEcCC-----ChhHHHHHHHHcCCC
Q 047978 203 DNIDKFLAESFDQVSLNDHDWNSLFWMMHPI-----GPAVLDQIEGKLGLE 248 (320)
Q Consensus 203 ~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~-----~~~~~~~~~~~lg~~ 248 (320)
+...++++++|+++|++++|++ .+++.+. .+.....++..+|++
T Consensus 9 ~l~~~A~~~al~~ag~~~~~i~--~li~~~~~~~~~~~~~a~~i~~~lg~~ 57 (254)
T cd00327 9 ELGFEAAEQAIADAGLSKGPIV--GVIVGTTGGSGEFSGAAGQLAYHLGIS 57 (254)
T ss_pred HHHHHHHHHHHHHcCCCCCCce--EEEEEECCCCccccHHHHHHHHHhCCC
Confidence 4456788899999999998874 3433322 234556788999996
No 201
>PLN03171 chalcone synthase-like protein; Provisional
Probab=57.50 E-value=33 Score=32.76 Aligned_cols=68 Identities=13% Similarity=0.021 Sum_probs=41.8
Q ss_pred hhHHHHHHHHhhhcCCCCCCCCceEEEEcC----CChhHHHHHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHH
Q 047978 203 DNIDKFLAESFDQVSLNDHDWNSLFWMMHP----IGPAVLDQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMR 278 (320)
Q Consensus 203 ~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~----~~~~~~~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~ 278 (320)
+.-.++.+.+|+++|++++||+ ++|+.. ..+..--.++++||++..-... . ..++ +.+.-+.+|..+.
T Consensus 110 ~la~~Aa~~aL~~ag~~~~dId--~li~~t~t~~~~P~~a~~v~~~LGl~~~~~~~----~-~~~~-gC~g~~~aL~~A~ 181 (399)
T PLN03171 110 ELAAEAAKKAIAEWGRPAADIT--HLVVTTNSGAHIPGVDFRLVPLLGLRPSVRRT----M-LHLN-GCFAGAAALRLAK 181 (399)
T ss_pred HHHHHHHHHHHHHcCCCHHHCC--EEEEEcCCCCCCCchHHHHHHHhCCCccccee----e-ccCC-ccHHHHHHHHHHH
Confidence 3345677888999999999974 444411 2344556688999997543111 1 1233 6666666666553
No 202
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II
Probab=57.43 E-value=8.7 Score=38.27 Aligned_cols=45 Identities=11% Similarity=0.072 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEE-EEeeCCCCCCCHHHHHHHHcCC
Q 047978 60 GKEAVSKAIKEWGQPISKITHLI-SCSVSGVDMPGADYQLTKLLGL 104 (320)
Q Consensus 60 a~~Aa~~aL~~ag~~~~dId~li-~~s~t~~~~p~~a~~l~~~LGl 104 (320)
..+|.++||+++|++|+|||+|- ++|.|+.-.+.-...|.+.+|-
T Consensus 407 ~~~am~~AL~~AGl~p~dIdyInaHGTGT~~gD~~E~~Ai~~~Fg~ 452 (540)
T PLN02787 407 VILCIEKALAQSGVSKEDVNYINAHATSTKAGDLKEYQALMRCFGQ 452 (540)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEccCccCCCCCHHHHHHHHHHhCC
Confidence 46899999999999999999874 3444443334445667777764
No 203
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=57.08 E-value=12 Score=36.86 Aligned_cols=44 Identities=23% Similarity=0.097 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcc
Q 047978 60 GKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPS 107 (320)
Q Consensus 60 a~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~ 107 (320)
...|+++|++++|++++|||++=+.+|.+ .....-.+.||+...
T Consensus 294 ~~~aa~~a~~~AGi~~~Did~~elydcF~----~~~~~~~E~LGl~~~ 337 (498)
T PRK08257 294 IRAAGRRALALAGLGIDDIDAFDLYSCFP----SAVQVAARELGLDLD 337 (498)
T ss_pred HHHHHHHHHHHhCCCHHHCCEEEeccCCH----HHHHHHHHHcCcCCC
Confidence 45799999999999999999987766543 334556688888654
No 204
>PRK07855 lipid-transfer protein; Provisional
Probab=57.04 E-value=14 Score=35.04 Aligned_cols=44 Identities=11% Similarity=-0.045 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcc
Q 047978 60 GKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPS 107 (320)
Q Consensus 60 a~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~ 107 (320)
...|+++|++++|++++|||.+-+.- .++.......+.||+.+.
T Consensus 268 ~~~aa~~a~~~AGi~~~DiDv~El~D----~Ft~~~l~~~E~lG~~~~ 311 (386)
T PRK07855 268 MGLVARQLWAQSGLGPADIDTAILYD----HFTPFVLMQLEELGFCGR 311 (386)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEecc----CCcHHHHHHHHHcCCCCC
Confidence 44799999999999999999874333 344455666788998654
No 205
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=56.79 E-value=49 Score=30.04 Aligned_cols=46 Identities=13% Similarity=0.211 Sum_probs=32.2
Q ss_pred chhHHHHHHHHhhhcCCCCCCCCceEEEEcCC----ChhHHHHHHHHcCCC
Q 047978 202 ADNIDKFLAESFDQVSLNDHDWNSLFWMMHPI----GPAVLDQIEGKLGLE 248 (320)
Q Consensus 202 ~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~----~~~~~~~~~~~lg~~ 248 (320)
.+...++++++|+++|++++||+ ..++.+.. .+.....+.+.+|++
T Consensus 49 ~~l~~~a~~~aL~~ag~~~~~Id-~li~~~~~~~~~~~~~~~~i~~~lg~~ 98 (324)
T cd00827 49 PTMAVEAARRALERAGIDPDDIG-LLIVATESPIDKGKSAATYLAELLGLT 98 (324)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-EEEEEcCCCCCCCccHHHHHHHHcCCC
Confidence 45566888999999999999874 22333321 234567788999997
No 206
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=55.98 E-value=14 Score=35.18 Aligned_cols=46 Identities=20% Similarity=0.201 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcc
Q 047978 58 KLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPS 107 (320)
Q Consensus 58 ~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~ 107 (320)
.....|++++++++|++|+|||++=+.- .++.......+.||+.+.
T Consensus 288 ~~~~~a~~~a~~~agl~~~Did~~Ei~d----~Fa~~~l~~~e~lG~~~~ 333 (390)
T PRK06504 288 EAPLPATERALKKAGMKIDDIDLYEVNE----AFASVPLAWLKATGADPE 333 (390)
T ss_pred ccHHHHHHHHHHHcCCCHHHCCEEEecc----cchHHHHHHHHHhCCCCC
Confidence 3456799999999999999999874433 234445566788998653
No 207
>KOG2707 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones]
Probab=55.82 E-value=20 Score=33.45 Aligned_cols=45 Identities=9% Similarity=0.076 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEeeCC-CCCC-----CHHHHHHHHcCCC
Q 047978 60 GKEAVSKAIKEWGQPISKITHLISCSVSG-VDMP-----GADYQLTKLLGLK 105 (320)
Q Consensus 60 a~~Aa~~aL~~ag~~~~dId~li~~s~t~-~~~p-----~~a~~l~~~LGl~ 105 (320)
-.+..++||+++|..|+|+|+| .+|..| ...+ +.|-.++.++..+
T Consensus 86 i~~~iqral~aa~~~p~dldaI-AVT~gPGl~lsL~vGl~fA~glA~~l~kP 136 (405)
T KOG2707|consen 86 IPRLIQRALDAAGLSPKDLDAI-AVTRGPGLPLSLKVGLSFAKGLAVKLQKP 136 (405)
T ss_pred HHHHHHHHHHHcCCCcccceeE-EEecCCCceeehhhhHHHHHHHHHhccCC
Confidence 4678999999999999999976 566666 3332 3455666666554
No 208
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=55.71 E-value=12 Score=35.87 Aligned_cols=43 Identities=14% Similarity=0.145 Sum_probs=32.2
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcc
Q 047978 61 KEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPS 107 (320)
Q Consensus 61 ~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~ 107 (320)
..|++++|+++|++++|||++-.. ..++.......+.||+.+.
T Consensus 303 ~~a~~~al~~AGl~~~DID~~ei~----daFa~~~l~~~e~lG~~~~ 345 (402)
T PRK08242 303 VPATRKALAKAGLTVDDIDLFELN----EAFASVVLRFMQALDIPHD 345 (402)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEec----chhhHHHHHHHHHhCCCCc
Confidence 579999999999999999987632 2344445566788998643
No 209
>PRK09051 beta-ketothiolase; Provisional
Probab=55.50 E-value=12 Score=35.62 Aligned_cols=43 Identities=21% Similarity=0.320 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCc
Q 047978 60 GKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKP 106 (320)
Q Consensus 60 a~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~ 106 (320)
...|++++|+++|++++|||++-.. ..++.......+.||+..
T Consensus 294 ~~~a~~~al~~agi~~~did~~ei~----d~f~~~~~~~~e~lg~~~ 336 (394)
T PRK09051 294 PVPATQKALERAGLTVADLDVIEAN----EAFAAQACAVTRELGLDP 336 (394)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEec----CccHHHHHHHHHHhCCCc
Confidence 4789999999999999999987542 123344555678888854
No 210
>PRK06158 thiolase; Provisional
Probab=55.23 E-value=45 Score=31.61 Aligned_cols=47 Identities=11% Similarity=0.099 Sum_probs=30.4
Q ss_pred chhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHHHHHHcCCCc
Q 047978 202 ADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEK 249 (320)
Q Consensus 202 ~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~ 249 (320)
.+...++++++|+.+|++++||| ..++........-..+++.+|++.
T Consensus 29 ~eL~~eA~~~Al~dAgl~~~dID-~iv~~~~~~~~~~~~la~~lGl~~ 75 (384)
T PRK06158 29 MELLAQAAHRALADAGLTMADVD-GLFTASPDDALWGLSVAEYLGIRP 75 (384)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-EEEEecCCCCCcHHHHHHHcCCCC
Confidence 45567888999999999999984 223333211111135788899965
No 211
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=54.79 E-value=5 Score=38.15 Aligned_cols=42 Identities=17% Similarity=0.032 Sum_probs=30.8
Q ss_pred HHHHHHHHHHcCCC--CCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCc
Q 047978 61 KEAVSKAIKEWGQP--ISKITHLISCSVSGVDMPGADYQLTKLLGLKP 106 (320)
Q Consensus 61 ~~Aa~~aL~~ag~~--~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~ 106 (320)
..|++++++++|++ ++|||.+-+.- .+........+.||+.+
T Consensus 259 ~~Aa~~a~~~AGi~~p~~DiD~~ei~D----~Ft~~~l~~~e~lG~~~ 302 (385)
T PRK06066 259 RIAADMAYKMAGIESPRKEVDAAEVDD----RYSYKELQHIEALRLSE 302 (385)
T ss_pred HHHHHHHHHHcCCCCCHHHCcEEEEec----CChHHHHHHHHHcCCCC
Confidence 47999999999997 69999875432 33344556677888754
No 212
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=54.79 E-value=15 Score=34.79 Aligned_cols=43 Identities=21% Similarity=0.051 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCc
Q 047978 60 GKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKP 106 (320)
Q Consensus 60 a~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~ 106 (320)
...|++++|+++|++++|||++-...+ ++.......+.||+.+
T Consensus 260 ~~~a~~~al~~aGi~~~did~~e~~d~----ft~~~~~~~e~lgl~~ 302 (389)
T PRK06064 260 AVVAAEKAYKMAGIEPKDIDVAEVHDC----FTIAEILAYEDLGFAK 302 (389)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecCC----CcHHHHHHHHHcCCCC
Confidence 457999999999999999998744332 2224455677888743
No 213
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=54.27 E-value=12 Score=35.33 Aligned_cols=44 Identities=16% Similarity=0.019 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCc
Q 047978 59 LGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKP 106 (320)
Q Consensus 59 la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~ 106 (320)
-...|++++|+++|++++|||++...- .+........+.||+..
T Consensus 259 ~~~~a~~~al~~Agl~~~Did~~ei~e----afa~~~~~~~e~lgl~~ 302 (361)
T PRK06690 259 GPIFAVNKLLNEMNMKVEDIDYFEINE----AFASKVVACAKELQIPY 302 (361)
T ss_pred HHHHHHHHHHHHcCCCHHHcCEeeecc----hhHHHHHHHHHhcCCCc
Confidence 367899999999999999999885532 23334455667888854
No 214
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=54.15 E-value=13 Score=35.39 Aligned_cols=44 Identities=11% Similarity=0.076 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEeeC--CCCCCCHHHHHHHHcCC
Q 047978 60 GKEAVSKAIKEWGQPISKITHLISCSVS--GVDMPGADYQLTKLLGL 104 (320)
Q Consensus 60 a~~Aa~~aL~~ag~~~~dId~li~~s~t--~~~~p~~a~~l~~~LGl 104 (320)
..+|.+++|+++|++|+|||++. ++-+ +.-.+.-...|++.+|-
T Consensus 262 ~~~a~~~Al~~Agl~~~dId~v~-~hgtgt~~~D~~E~~al~~~f~~ 307 (392)
T PRK09185 262 AILAMQQALADAGLAPADIGYIN-LHGTATPLNDAMESRAVAAVFGD 307 (392)
T ss_pred HHHHHHHHHHHcCCCHHHccEEE-eCCCCCcCCCHHHHHHHHHHhCC
Confidence 35899999999999999999864 3333 33334445666666663
No 215
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=53.30 E-value=11 Score=36.17 Aligned_cols=44 Identities=14% Similarity=0.134 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEee-CCCCCCCHHHHHHHHcC
Q 047978 60 GKEAVSKAIKEWGQPISKITHLISCSV-SGVDMPGADYQLTKLLG 103 (320)
Q Consensus 60 a~~Aa~~aL~~ag~~~~dId~li~~s~-t~~~~p~~a~~l~~~LG 103 (320)
..+|.+++|+++|++|+|||+|....+ |+...+.-...|.+.+|
T Consensus 291 ~~~ai~~AL~~agi~p~dId~i~~Hgtgt~~~d~~E~~al~~~~~ 335 (425)
T PRK06501 291 AIGAIRAALADAGLTPEQIDYINAHGTSTPENDKMEYLGLSAVFG 335 (425)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecCccCcchHHHHHHHHHHHhc
Confidence 568999999999999999998864332 33333444455566555
No 216
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=52.60 E-value=13 Score=35.26 Aligned_cols=47 Identities=11% Similarity=0.142 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEE-EeeCCCCCCCHHHHHHHHcCC
Q 047978 58 KLGKEAVSKAIKEWGQPISKITHLIS-CSVSGVDMPGADYQLTKLLGL 104 (320)
Q Consensus 58 ~la~~Aa~~aL~~ag~~~~dId~li~-~s~t~~~~p~~a~~l~~~LGl 104 (320)
.-..+|.+++|+++|++|+|||+|.. .+.|+...+.-...+++.++-
T Consensus 274 ~~~~~a~~~Al~~Agi~~~dId~i~~hgtgt~~~D~~E~~ai~~~~~~ 321 (407)
T cd00828 274 KGIARAIRTALAKAGLSLDDLDVISAHGTSTPANDVAESRAIAEVAGA 321 (407)
T ss_pred HHHHHHHHHHHHHcCCCHHHcCEEecccccCccccHHHHHHHHHHHhc
Confidence 55688999999999999999998752 333333344445555555553
No 217
>PRK06059 lipid-transfer protein; Provisional
Probab=52.59 E-value=19 Score=34.36 Aligned_cols=42 Identities=17% Similarity=0.183 Sum_probs=30.1
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCc
Q 047978 61 KEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKP 106 (320)
Q Consensus 61 ~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~ 106 (320)
..|++++++++|++++|||++=..-+ +........+.||+.+
T Consensus 276 ~~a~~~a~~~agl~~~Did~~El~d~----f~~~~l~~~e~lGl~~ 317 (399)
T PRK06059 276 DQILDAAYAEAGIGPEDLSLAEVYDL----STALELDWYEHLGLCP 317 (399)
T ss_pred HHHHHHHHHHcCCCHHHCcEEeeccc----ChHHHHHHHHHcCCCC
Confidence 57899999999999999998754442 2223334458888864
No 218
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=52.48 E-value=13 Score=35.39 Aligned_cols=45 Identities=13% Similarity=0.152 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEE-EEeeCCCCCCCHHHHHHHHcCC
Q 047978 60 GKEAVSKAIKEWGQPISKITHLI-SCSVSGVDMPGADYQLTKLLGL 104 (320)
Q Consensus 60 a~~Aa~~aL~~ag~~~~dId~li-~~s~t~~~~p~~a~~l~~~LGl 104 (320)
..+|+++||+++|++++|||++- +++.|+...+.-...+++.+|.
T Consensus 278 ~~~a~~~Al~~agi~~~dId~v~~hgtgt~~~d~~E~~al~~~~~~ 323 (411)
T PRK07314 278 AARAMKLALKDAGINPEDIDYINAHGTSTPAGDKAETQAIKRVFGE 323 (411)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEccccCCccccHHHHHHHHHHhcc
Confidence 46899999999999999999874 3343434444444566666663
No 219
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=52.33 E-value=15 Score=35.08 Aligned_cols=47 Identities=15% Similarity=0.155 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCC--CCCCCHHHHHHHHcCC
Q 047978 57 PKLGKEAVSKAIKEWGQPISKITHLISCSVSG--VDMPGADYQLTKLLGL 104 (320)
Q Consensus 57 ~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~--~~~p~~a~~l~~~LGl 104 (320)
..=..+|.+++|+++|++|+|||+|. ++.|. .-.+.-...|.+.+|-
T Consensus 269 ~~~~~~a~~~al~~ag~~~~~i~~v~-~hgtgt~~~D~~E~~al~~~fg~ 317 (399)
T cd00832 269 PPGLARAIRLALADAGLTPEDVDVVF-ADAAGVPELDRAEAAALAAVFGP 317 (399)
T ss_pred HHHHHHHHHHHHHHcCCCHHHccEEE-eccCcCCCCCHHHHHHHHHHhCC
Confidence 34456889999999999999999764 44333 4445555667777764
No 220
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=52.28 E-value=13 Score=35.20 Aligned_cols=47 Identities=11% Similarity=0.167 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEE-eeCCCCCCCHHHHHHHHcCC
Q 047978 58 KLGKEAVSKAIKEWGQPISKITHLISC-SVSGVDMPGADYQLTKLLGL 104 (320)
Q Consensus 58 ~la~~Aa~~aL~~ag~~~~dId~li~~-s~t~~~~p~~a~~l~~~LGl 104 (320)
.-..++++++|+++|++++|||+|... +.++...+.-+..+.+.++-
T Consensus 275 ~~~~~~i~~al~~agi~~~dId~v~~h~tgt~~~d~~E~~al~~~~~~ 322 (406)
T cd00834 275 EGAARAMRAALADAGLSPEDIDYINAHGTSTPLNDAAESKAIKRVFGE 322 (406)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEecccccCccccHHHHHHHHHHhcc
Confidence 445679999999999999999977533 32334444445556666655
No 221
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=52.24 E-value=33 Score=33.07 Aligned_cols=67 Identities=12% Similarity=0.090 Sum_probs=39.4
Q ss_pred chhHHHHHHHHhhhcCCCCCCCCceEE--EEcCCC-hhHHHHHHHHcCCCcchhhhhHHHHhccCCcccchHH
Q 047978 202 ADNIDKFLAESFDQVSLNDHDWNSLFW--MMHPIG-PAVLDQIEGKLGLEKTKLRETRHVLSEYGNMASATVL 271 (320)
Q Consensus 202 ~~~~~~~i~~~l~~~g~~~~d~~~~~~--i~h~~~-~~~~~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~ 271 (320)
.+...++++++|+++|+++++|+.+.+ +.+... ..+...+...+|++...-..+ +.+.+-+|..++.
T Consensus 30 ~eL~~~a~~~al~~agl~~~~ID~vi~G~~~~~~~~~~~ar~~a~~aGl~~~~P~~t---V~~aCaSG~~Ai~ 99 (428)
T PRK08963 30 VDLGKMVVGELLARSEIDPELIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYS---VSRACATSFQAVA 99 (428)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCccHHHHHHHHHCCCCCCCccee---ehhhhHHHHHHHH
Confidence 355678899999999999988852222 111122 234455778889985444433 5544444443333
No 222
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase
Probab=52.13 E-value=15 Score=35.44 Aligned_cols=46 Identities=7% Similarity=0.104 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEE-EeeCCCCCCCHHHHHHHHcC
Q 047978 58 KLGKEAVSKAIKEWGQPISKITHLIS-CSVSGVDMPGADYQLTKLLG 103 (320)
Q Consensus 58 ~la~~Aa~~aL~~ag~~~~dId~li~-~s~t~~~~p~~a~~l~~~LG 103 (320)
+-..+|+++||+++|++|+|||+|-. .+.|+.-.+.-...+.+.+|
T Consensus 299 ~~~~~a~~~Al~~Agi~~~dId~ve~hgtgt~~~D~~E~~ai~~~~~ 345 (437)
T PLN02836 299 RGAVLAMTRALQQSGLHPNQVDYVNAHATSTPLGDAVEARAIKTVFS 345 (437)
T ss_pred HHHHHHHHHHHHHcCCCHhHcCEEEccCCcCcCcCHHHHHHHHHHhc
Confidence 33568899999999999999998742 23333333333444555554
No 223
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=52.10 E-value=17 Score=34.58 Aligned_cols=45 Identities=13% Similarity=-0.071 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCc
Q 047978 58 KLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKP 106 (320)
Q Consensus 58 ~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~ 106 (320)
.....|++++++++|++|+|||.+-+..+ ++.......+.||+-+
T Consensus 255 ~~~~~aa~~a~~~AGi~~~did~~elyD~----Fs~~~~~~~E~lGl~~ 299 (388)
T PRK08142 255 SGAAWSGPAAFAEAGVTPADIKYASIYDS----FTITVLMQLEDLGFCK 299 (388)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEecc----chHHHHHHHHHcCCCC
Confidence 34568999999999999999997655443 3333445567888744
No 224
>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism]
Probab=52.04 E-value=16 Score=32.70 Aligned_cols=80 Identities=21% Similarity=0.193 Sum_probs=52.9
Q ss_pred cccchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCc-------chhhh-----hhh---hh
Q 047978 52 LVPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKP-------SVKRV-----MLT---AE 116 (320)
Q Consensus 52 ~~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~-------~~c~~-----~l~---l~ 116 (320)
++.+-.||+.+|..++|+++++.-++|+--.++=..+. .....+-.-.+|+.. ..|++ |+. ++
T Consensus 25 ~~~dypd~a~ea~tkal~da~ikys~vqqa~vgyvfgd--stcgqraiyevgmtgipi~nvnnncatgssalflakqiie 102 (408)
T KOG1406|consen 25 ADWDYPDFAKEAITKALQDAGIKYSEVQQAVVGYVFGD--STCGQRAIYEVGMTGIPIYNVNNNCATGSSALFLAKQIIE 102 (408)
T ss_pred cCCCCchHHHHHHHHHHHhcCCCHHHHHhhhheeeecC--CccchHHHHhccccCcceeeccCccccCchHHHHHHHHHh
Confidence 35667899999999999999999998875543322221 111222223555543 23542 333 78
Q ss_pred cCCCCeEEEEEeecccc
Q 047978 117 SNAGARVLVVCSEITVG 133 (320)
Q Consensus 117 ~~~~~~~LVv~~e~~s~ 133 (320)
+|..+.||..+-|+.++
T Consensus 103 sgn~dcvlalgfekm~~ 119 (408)
T KOG1406|consen 103 SGNSDCVLALGFEKMER 119 (408)
T ss_pred cCCcceEEeechhhhCC
Confidence 89999999999998864
No 225
>KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism]
Probab=51.96 E-value=33 Score=31.50 Aligned_cols=83 Identities=12% Similarity=0.039 Sum_probs=61.2
Q ss_pred cccchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHH-cCCCcch--------hhhhhh--------
Q 047978 52 LVPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKL-LGLKPSV--------KRVMLT-------- 114 (320)
Q Consensus 52 ~~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~-LGl~~~~--------c~~~l~-------- 114 (320)
.+..+-+|...+.+..+++.+++|..|+-|+++++-..-.-...++++.- -|++..+ |++-+.
T Consensus 57 kdt~pDeLl~~vl~a~ie~t~~dp~~igdi~vG~vL~pg~ga~e~R~a~~~ag~P~tvpv~tvNRqCsSGLqaVadiA~~ 136 (435)
T KOG1389|consen 57 KDTRPDELLAAVLRAVIEKTNLDPSLIGDIVVGTVLAPGSGASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADIAAK 136 (435)
T ss_pred ccCChHHHHHHHHHHHHhhcCCCHHHhcceeeeeccCCCcchHHHHHHHHHcCCCcccchhhhhhhhhhHHHHHHHHHHH
Confidence 36777889999999999999999999999999998652222455555554 3666542 665333
Q ss_pred hhcCCCCeEEEEEeeccccc
Q 047978 115 AESNAGARVLVVCSEITVGT 134 (320)
Q Consensus 115 l~~~~~~~~LVv~~e~~s~~ 134 (320)
+++|.++--|-.+.|-.+.+
T Consensus 137 Ir~G~ydIGla~GvESMt~~ 156 (435)
T KOG1389|consen 137 IRAGFYDIGLAAGVESMTTN 156 (435)
T ss_pred HhcCceeeecccchhhhccc
Confidence 67888888888888877753
No 226
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=51.84 E-value=8.8 Score=36.67 Aligned_cols=44 Identities=20% Similarity=0.262 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCc
Q 047978 59 LGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKP 106 (320)
Q Consensus 59 la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~ 106 (320)
-...|+++||+++|++++|||++-. ...+........+.||+..
T Consensus 298 ~~~~A~~~al~~Agi~~~did~~ei----~D~f~~~~l~~~e~lg~~~ 341 (399)
T PRK09052 298 GPIEAIPAALKQAGLKQDDLDWIEL----NEAFAAQSLAVIRDLGLDP 341 (399)
T ss_pred hHHHHHHHHHHHcCCCHHHcCEEEe----CcHHHHHHHHHHHHhCCCC
Confidence 3578999999999999999998751 1233344455667888754
No 227
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=51.70 E-value=38 Score=32.24 Aligned_cols=51 Identities=14% Similarity=0.132 Sum_probs=32.5
Q ss_pred chhHHHHHHHHhhhcCCCCCCCCceEEEEcCC-----ChhHHHHHHHHcCCCcchhhh
Q 047978 202 ADNIDKFLAESFDQVSLNDHDWNSLFWMMHPI-----GPAVLDQIEGKLGLEKTKLRE 254 (320)
Q Consensus 202 ~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~-----~~~~~~~~~~~lg~~~e~~~~ 254 (320)
.+...++++++|+++|++++||| .+++-+. ....-..++..+|++...-..
T Consensus 27 ~eLa~~A~~~aL~~agl~~~dID--~vi~g~~~~~~~~~~~~~~~~~~~Gl~~~~p~~ 82 (393)
T PRK08235 27 TELGGIAIKEALERANVSAEDVE--EVIMGTVLQGGQGQIPSRQAARAAGIPWEVQTE 82 (393)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC--EEEEEecccCCCCCCHHHHHHHHcCCCCCccee
Confidence 45567888999999999999985 3333221 122334567889997544333
No 228
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=51.67 E-value=11 Score=36.18 Aligned_cols=43 Identities=14% Similarity=0.066 Sum_probs=32.1
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcc
Q 047978 61 KEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPS 107 (320)
Q Consensus 61 ~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~ 107 (320)
..|++++|+++|++++|||++.+.- .+........+.||++..
T Consensus 318 ~~Ai~~aL~~AGl~~~DID~~ei~e----aFa~~~l~~~~~lg~~~~ 360 (417)
T PRK06025 318 VPAAKKVLAKAGLTKDDIDLWEINE----AFAVVAEKFIRDLDLDRD 360 (417)
T ss_pred HHHHHHHHHHcCCCHHHCcEEEEch----HHHHHHHHHHHHcCCChh
Confidence 5799999999999999999886433 223344567778887643
No 229
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=51.35 E-value=18 Score=34.60 Aligned_cols=48 Identities=10% Similarity=0.096 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCEEEEE-eeCCCCCCCHHHHHHHHcCC
Q 047978 57 PKLGKEAVSKAIKEWGQPISKITHLISC-SVSGVDMPGADYQLTKLLGL 104 (320)
Q Consensus 57 ~~la~~Aa~~aL~~ag~~~~dId~li~~-s~t~~~~p~~a~~l~~~LGl 104 (320)
.....+|++++|+++|+.++|||.+... +.|+.....-...|.+.+|.
T Consensus 278 ~~~~~~a~~~al~~Agl~~~dId~i~~h~tgt~~~d~~E~~al~~~~~~ 326 (424)
T smart00825 278 GPAQARLIRQALARAGVDPADVDYVEAHGTGTPLGDPIEAEALAAVFGQ 326 (424)
T ss_pred HHHHHHHHHHHHHHhCCCHHHccEEEeeCCCCCCCCHHHHHHHHHHHhc
Confidence 3456789999999999999999987533 33332233334455555553
No 230
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=51.18 E-value=49 Score=31.44 Aligned_cols=52 Identities=13% Similarity=-0.005 Sum_probs=33.8
Q ss_pred chhHHHHHHHHhhhcCCCCCCCCceEEEEc--C-C-ChhHHHHHHHHcCCCcchhhh
Q 047978 202 ADNIDKFLAESFDQVSLNDHDWNSLFWMMH--P-I-GPAVLDQIEGKLGLEKTKLRE 254 (320)
Q Consensus 202 ~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h--~-~-~~~~~~~~~~~lg~~~e~~~~ 254 (320)
.+...++++++|+++|++++|||.+ ++.+ | . +..+...+...+|++.+....
T Consensus 27 ~~L~~~a~~~al~dagi~~~dID~v-i~g~~~~~~~~~~~a~~~~~~~Gl~~~~p~~ 82 (388)
T PRK06366 27 PQLGGAAIKAVIDDAKLDPALVQEV-IMGNVIQAGVGQNPAGQAAYHAGLPFGVTKY 82 (388)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEE-EEEecCCCCccCcHHHHHHHHCCCCCCCcce
Confidence 4567788999999999999998522 2321 1 1 222345577889998644444
No 231
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=51.04 E-value=18 Score=34.37 Aligned_cols=44 Identities=23% Similarity=0.188 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcc
Q 047978 60 GKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPS 107 (320)
Q Consensus 60 a~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~ 107 (320)
...|++++|+++|++++|||++=+.- .++.......+.||+.+.
T Consensus 294 ~~~a~~~al~~Agl~~~dId~~e~~d----~f~~~~l~~~e~lg~~~~ 337 (394)
T PRK06445 294 PVPASKKALEKAGLSVKDIDLWEINE----AFAVVVLYAIKELGLDPE 337 (394)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecc----cchHHHHHHHHHhCCCcc
Confidence 46799999999999999999875433 234445566788887654
No 232
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=50.70 E-value=47 Score=31.63 Aligned_cols=50 Identities=14% Similarity=0.126 Sum_probs=32.4
Q ss_pred chhHHHHHHHHhhhcCCCCCCCCceEEEEc--C--CChhHHHHHHHHcCCCcchh
Q 047978 202 ADNIDKFLAESFDQVSLNDHDWNSLFWMMH--P--IGPAVLDQIEGKLGLEKTKL 252 (320)
Q Consensus 202 ~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h--~--~~~~~~~~~~~~lg~~~e~~ 252 (320)
.+...++++++|+++|++++|||.+ ++.+ + .....-..++..+|++.+..
T Consensus 27 ~~La~~A~~~AL~~agl~~~dID~v-i~g~~~~~~~~~~~a~~va~~lGl~~~~p 80 (393)
T PRK05656 27 VELGAAVIRRLLEQTGLDPAQVDEV-ILGQVLTAGAGQNPARQAAIKAGLPHSVP 80 (393)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEE-EEEEecCCCCCCcHHHHHHHHcCCCCCcc
Confidence 3556688899999999999998522 2211 1 12233455788999985443
No 233
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=50.42 E-value=14 Score=34.77 Aligned_cols=29 Identities=10% Similarity=0.094 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCEEEEEe
Q 047978 57 PKLGKEAVSKAIKEWGQPISKITHLISCS 85 (320)
Q Consensus 57 ~~la~~Aa~~aL~~ag~~~~dId~li~~s 85 (320)
.+...++.+++|+++|++++|||.+++..
T Consensus 270 ~~~~~~~i~~~L~~~gl~~~dId~~~~Hq 298 (372)
T PRK07515 270 CPMVAEHIVEHLAENGLTPADVKRFWLHQ 298 (372)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEECC
Confidence 34567899999999999999999887544
No 234
>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism]
Probab=50.21 E-value=22 Score=31.82 Aligned_cols=32 Identities=6% Similarity=-0.029 Sum_probs=27.5
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeC
Q 047978 56 VPKLGKEAVSKAIKEWGQPISKITHLISCSVS 87 (320)
Q Consensus 56 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t 87 (320)
..||...|++++.++.|+.|.||+.|-..-|.
T Consensus 270 gfdm~~~aa~~l~aksgltpndvqvielhdcf 301 (408)
T KOG1406|consen 270 GFDMTRLAAKRLFAKSGLTPNDVQVIELHDCF 301 (408)
T ss_pred cchHHHHHHHHHHHHcCCCcccceEEEeeccc
Confidence 36889999999999999999999988665543
No 235
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=50.05 E-value=49 Score=31.36 Aligned_cols=49 Identities=12% Similarity=0.057 Sum_probs=31.9
Q ss_pred chhHHHHHHHHhhhcCCCCCCCCceEEEEcCC-----ChhHHHHHHHHcCCCcchh
Q 047978 202 ADNIDKFLAESFDQVSLNDHDWNSLFWMMHPI-----GPAVLDQIEGKLGLEKTKL 252 (320)
Q Consensus 202 ~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~-----~~~~~~~~~~~lg~~~e~~ 252 (320)
.+...++++++|+++|++++||| .+++.+. ....-..+...+|++.+..
T Consensus 22 ~~La~~A~~~Al~dAgl~~~dID--~vv~g~~~~~~~~~~~a~~va~~lGl~~~~~ 75 (386)
T TIGR01930 22 EDLGAAVIKELLERNPLDPELID--DVIFGNVLQAGEQQNIARQAALLAGLPESVP 75 (386)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC--EEEEEeccCCCCCChHHHHHHHHcCCCCCce
Confidence 45567888999999999999984 3433221 1222345778889875443
No 236
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=49.95 E-value=17 Score=34.45 Aligned_cols=44 Identities=18% Similarity=0.114 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcc
Q 047978 60 GKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPS 107 (320)
Q Consensus 60 a~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~ 107 (320)
...|+++|++++|+.++|||++-.. ..+........+.||+.+.
T Consensus 282 ~~~a~~~a~~~agi~~~did~~e~~----d~Fa~~~~~~~e~lG~~~~ 325 (382)
T PRK07801 282 PIPATRYALEKTGLSIDDIDVVEIN----EAFAPVVLAWLKETGADPA 325 (382)
T ss_pred hHHHHHHHHHHcCCCHHHcCEeeec----ccchHHHHHHHHHhCCCch
Confidence 4579999999999999999987222 2333444556777887643
No 237
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=48.36 E-value=18 Score=34.31 Aligned_cols=47 Identities=17% Similarity=0.124 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCEEEEE-eeCCCCCCCHHHHHHHHcC
Q 047978 57 PKLGKEAVSKAIKEWGQPISKITHLISC-SVSGVDMPGADYQLTKLLG 103 (320)
Q Consensus 57 ~~la~~Aa~~aL~~ag~~~~dId~li~~-s~t~~~~p~~a~~l~~~LG 103 (320)
..-..+|++++|+++|++++|||.+... +.|+...+.-...|...++
T Consensus 278 ~~~~~~a~~~al~~Agi~~~did~i~~hgtgt~~~D~~E~~al~~~f~ 325 (421)
T cd00833 278 GEAQAALIRRAYARAGVDPSDIDYVEAHGTGTPLGDPIEVEALAKVFG 325 (421)
T ss_pred HHHHHHHHHHHHHHhCCCHHHCcEEEeeCCCCCCCCHHHHHHHHHHHh
Confidence 4556789999999999999999987533 3333222333344555444
No 238
>PRK09604 UGMP family protein; Validated
Probab=48.24 E-value=25 Score=32.70 Aligned_cols=48 Identities=15% Similarity=0.029 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCC------CHHHHHHHHcCCC
Q 047978 57 PKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMP------GADYQLTKLLGLK 105 (320)
Q Consensus 57 ~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p------~~a~~l~~~LGl~ 105 (320)
.+......+++|+++++++.|||.|.+. .-|-.++ +.|..++..++++
T Consensus 52 ~~~l~~~i~~~L~~~~~~~~did~iavt-~GPG~~tglrvg~~~Ak~La~~~~ip 105 (332)
T PRK09604 52 VENIVPLIEEALKEAGLTLEDIDAIAVT-AGPGLVGALLVGVSFAKALALALNKP 105 (332)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEe-cCCCcHHhHHHHHHHHHHHHHHhCCC
Confidence 4566788999999999999999987654 4441122 2455666666654
No 239
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=48.01 E-value=11 Score=35.86 Aligned_cols=44 Identities=25% Similarity=0.210 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCc
Q 047978 59 LGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKP 106 (320)
Q Consensus 59 la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~ 106 (320)
-...|++++|+++|++++|||++-.. ..++...-.-.+.||+..
T Consensus 290 ~~~~a~~~al~~agl~~~did~~ei~----d~f~~~~l~~~e~lg~~~ 333 (391)
T PRK07661 290 GPIAAIPKALKLAGLELSDIGLFELN----EAFASQSIQVIRELGLDE 333 (391)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEeC----CHHHHHHHHHHHHcCCCC
Confidence 35789999999999999999988622 223333334446788743
No 240
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=47.90 E-value=19 Score=34.50 Aligned_cols=47 Identities=11% Similarity=0.126 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHH-cCCCCCCcCEEE-EEeeCCCCCCCHHHHHHHHcCC
Q 047978 58 KLGKEAVSKAIKE-WGQPISKITHLI-SCSVSGVDMPGADYQLTKLLGL 104 (320)
Q Consensus 58 ~la~~Aa~~aL~~-ag~~~~dId~li-~~s~t~~~~p~~a~~l~~~LGl 104 (320)
.-..+|+++||++ +|++++|||+|- +++.|+...+.-...+.+.+|-
T Consensus 283 ~~~~~ai~~Al~~~Agi~~~dId~ie~hgtgt~~~D~~E~~al~~~~~~ 331 (421)
T PTZ00050 283 RGARRCMENALKDGANININDVDYVNAHATSTPIGDKIELKAIKKVFGD 331 (421)
T ss_pred HHHHHHHHHHHHhccCCChhhCCEEECCCccCCCCCHHHHHHHHHHhcc
Confidence 3467899999999 999999999874 3333333333333456666664
No 241
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=47.60 E-value=50 Score=31.57 Aligned_cols=48 Identities=10% Similarity=0.063 Sum_probs=32.1
Q ss_pred chhHHHHHHHHhhhcCCCCCCCCceEEEEcC----C-ChhHHHHHHHHcCCCcch
Q 047978 202 ADNIDKFLAESFDQVSLNDHDWNSLFWMMHP----I-GPAVLDQIEGKLGLEKTK 251 (320)
Q Consensus 202 ~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~----~-~~~~~~~~~~~lg~~~e~ 251 (320)
.+...++++++|+++|++++||| .++.-+ . ...+-..+...+|++..+
T Consensus 27 ~eLa~~A~~~AL~~agl~~~dID--~vv~g~~~~~~~~~~~a~~va~~~Gl~~~~ 79 (404)
T PRK06205 27 EELAATVIRALVERTGIDPARID--DVIFGQGYPNGEAPAIGRVAALDAGLPVTV 79 (404)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC--EEEEEeccCCCCCChHHHHHHHHcCCCCCC
Confidence 45567888999999999999985 333221 1 233445677889987544
No 242
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=46.85 E-value=22 Score=33.79 Aligned_cols=41 Identities=29% Similarity=0.240 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCC
Q 047978 60 GKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGL 104 (320)
Q Consensus 60 a~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl 104 (320)
...|++++|+++|++|+|||++=..- .+........+.||+
T Consensus 282 ~~~a~~~al~~AGi~p~DId~~Ei~d----aFa~~~l~~~e~lg~ 322 (385)
T TIGR02445 282 PVPATQKALKRAGLSISDIDVFELNE----AFAAQALPCLKDLGL 322 (385)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEEcc----ccHHHHHHHHHHcCC
Confidence 46899999999999999999775422 233445556678887
No 243
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=46.68 E-value=30 Score=33.42 Aligned_cols=44 Identities=18% Similarity=0.197 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHcCCC--CCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCc
Q 047978 59 LGKEAVSKAIKEWGQP--ISKITHLISCSVSGVDMPGADYQLTKLLGLKP 106 (320)
Q Consensus 59 la~~Aa~~aL~~ag~~--~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~ 106 (320)
....|++++++++|++ ++|||.+-..-+ ++.......+.||+.+
T Consensus 294 ~~~~a~~~a~~~AGl~~~~~DiD~~Ei~D~----Fa~~~l~~lE~lGl~~ 339 (430)
T PRK06365 294 AGRMAAKEAYEMAGITDPLNDLDLIELHDA----YTSSEIQTYEDLGLCK 339 (430)
T ss_pred HHHHHHHHHHHHcCCCCCHHHCCEEEeecC----CcHHHHHHHHHcCCCC
Confidence 3468999999999997 799998754442 3344456677888754
No 244
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=45.58 E-value=10 Score=36.17 Aligned_cols=44 Identities=18% Similarity=0.029 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCc
Q 047978 59 LGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKP 106 (320)
Q Consensus 59 la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~ 106 (320)
-...|+++||+++|++|+|||++-.. ..+........+.||+.+
T Consensus 291 ~~~~a~~~al~~agl~~~Did~~ei~----eafa~~~l~~~e~lg~~~ 334 (392)
T PRK07108 291 GPVFAVPKLLKQAGLKVDDIDLWELN----EAFAVQVLYCRDTLGIPM 334 (392)
T ss_pred hHHHHHHHHHHHcCCCHHHcCchHhh----hHHHHHHHHHHHhcCCCc
Confidence 35789999999999999999977411 112222233456777653
No 245
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=45.17 E-value=14 Score=35.28 Aligned_cols=42 Identities=17% Similarity=0.207 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCC
Q 047978 60 GKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLK 105 (320)
Q Consensus 60 a~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~ 105 (320)
...|++++|+++|++++|||++-.. ..++.......+.||+.
T Consensus 299 ~~~a~~~al~~Agl~~~DId~~ei~----D~f~~~~l~~~e~lg~~ 340 (401)
T PRK09050 299 PAPATRKLLARLGLTIDQFDVIELN----EAFAAQGLAVLRQLGLA 340 (401)
T ss_pred HHHHHHHHHHHcCCCHHHCCccccC----cHhHHHHHHHHHHcCCC
Confidence 4689999999999999999987522 23344445567888873
No 246
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=45.14 E-value=69 Score=30.46 Aligned_cols=49 Identities=10% Similarity=0.066 Sum_probs=32.3
Q ss_pred chhHHHHHHHHhhhcCCCCCCCCceEEEEcC---C-ChhHHHHHHHHcCCCcch
Q 047978 202 ADNIDKFLAESFDQVSLNDHDWNSLFWMMHP---I-GPAVLDQIEGKLGLEKTK 251 (320)
Q Consensus 202 ~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~---~-~~~~~~~~~~~lg~~~e~ 251 (320)
.+...++++++|+++|++++|||. .++.+. . +..+...+...+|++...
T Consensus 26 ~~L~~~a~~~al~dAgl~~~~ID~-vv~g~~~~~~~~~~~~~~~~~~~Gl~~~~ 78 (394)
T PLN02644 26 TELGSIAIQAALERAGVDPALVQE-VFFGNVLSANLGQAPARQAALGAGLPPST 78 (394)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCE-EEEEecCcCCcCCcHHHHHHHhcCCCCCC
Confidence 466678899999999999998852 233231 1 223334577889996544
No 247
>PF12244 DUF3606: Protein of unknown function (DUF3606); InterPro: IPR022037 This family of proteins is found in bacteria. Proteins in this family are typically between 58 and 85 amino acids in length. There is a single completely conserved residue G that may be functionally important.
Probab=45.11 E-value=15 Score=24.67 Aligned_cols=30 Identities=23% Similarity=0.428 Sum_probs=24.9
Q ss_pred hhHHHHHHHHcCCCcchhhhhHHHHhccCCccc
Q 047978 235 PAVLDQIEGKLGLEKTKLRETRHVLSEYGNMAS 267 (320)
Q Consensus 235 ~~~~~~~~~~lg~~~e~~~~~~~~~~~~Gn~~s 267 (320)
..=+..|+++||++++++.. .++..||...
T Consensus 20 ~~ev~ywa~~~gvt~~~L~~---AV~~vG~~~~ 49 (57)
T PF12244_consen 20 PYEVRYWAKRFGVTEEQLRE---AVRAVGNSRA 49 (57)
T ss_pred HHHHHHHHHHHCcCHHHHHH---HHHHHCcCHH
Confidence 44568899999999999987 4999999743
No 248
>PLN02287 3-ketoacyl-CoA thiolase
Probab=44.87 E-value=14 Score=35.97 Aligned_cols=43 Identities=23% Similarity=0.213 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCc
Q 047978 60 GKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKP 106 (320)
Q Consensus 60 a~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~ 106 (320)
...|++++|+++|++|+|||++=.. ..+......-.+.||+..
T Consensus 333 ~~~A~~~al~~Agl~~~DID~~Ei~----daFa~~~l~~~e~lG~~~ 375 (452)
T PLN02287 333 PAVAIPAAVKAAGLELDDIDLFEIN----EAFASQFVYCCKKLGLDP 375 (452)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEec----chHHHHHHHHHHHcCCCc
Confidence 4689999999999999999987321 122223333457788754
No 249
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=44.63 E-value=59 Score=30.98 Aligned_cols=69 Identities=10% Similarity=0.037 Sum_probs=41.7
Q ss_pred chhHHHHHHHHhhhcCCCCCCCCceEE-EEcCC--ChhHHHHHHHHcCCCcchhhhhHHHHhccCCcccchHHHH
Q 047978 202 ADNIDKFLAESFDQVSLNDHDWNSLFW-MMHPI--GPAVLDQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFV 273 (320)
Q Consensus 202 ~~~~~~~i~~~l~~~g~~~~d~~~~~~-i~h~~--~~~~~~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~ 273 (320)
.+...++++++|+++|++++||+.+++ -..+. +..+...+...+|+|.+.-..+ +.+.+-+|..++..+
T Consensus 28 ~~L~~~a~~~al~~agi~~~~Id~vv~G~~~~~~~g~~~~r~~~~~~Gl~~~~p~~~---V~~~CaSG~~Ai~~A 99 (392)
T PRK06633 28 PMLAAHLIKDILQNSKIDPALVNEVILGQVITGGSGQNPARQTLIHAGIPKEVPGYT---INKVCGSGLKSVALA 99 (392)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcCEEEEEecCccccccHHHHHHHHHCCCCCCccchh---hcchhHHHHHHHHHH
Confidence 355678899999999999998853333 11111 2234455678899986554443 555444444444433
No 250
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=44.28 E-value=14 Score=35.31 Aligned_cols=43 Identities=14% Similarity=0.050 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCc
Q 047978 60 GKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKP 106 (320)
Q Consensus 60 a~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~ 106 (320)
...|++++|+++|++|+|||++=.. ..+......-.+.||+..
T Consensus 297 ~~~a~~~al~~agl~~~Did~~ei~----d~fa~~~l~~~e~lg~~~ 339 (397)
T PRK06954 297 PVGAIRKLFEKNGWRAAEVDLFEIN----EAFAVVTMAAMKEHGLPH 339 (397)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEehh----hHHHHHHHHHHHHhCCCc
Confidence 4689999999999999999987311 122222233346788754
No 251
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=43.59 E-value=41 Score=32.10 Aligned_cols=43 Identities=19% Similarity=0.122 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHcCCC--CCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCc
Q 047978 60 GKEAVSKAIKEWGQP--ISKITHLISCSVSGVDMPGADYQLTKLLGLKP 106 (320)
Q Consensus 60 a~~Aa~~aL~~ag~~--~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~ 106 (320)
...|++++++++|++ ++|||.+-..- .+....-...+.||+.+
T Consensus 268 ~~~aa~~a~~~AGl~~~~~Did~~Ei~D----~Fs~~~l~~~e~lGl~~ 312 (398)
T PRK06157 268 TRIAARKAYREAGITDPREELSMAEVHD----CFSITELVTMEDLGLSE 312 (398)
T ss_pred HHHHHHHHHHHcCCCCchhcCCEEEEec----CChHHHHHHHHHcCCCC
Confidence 567999999999997 79999864322 33445566678888765
No 252
>PRK05790 putative acyltransferase; Provisional
Probab=43.42 E-value=85 Score=29.74 Aligned_cols=48 Identities=13% Similarity=0.070 Sum_probs=29.3
Q ss_pred chhHHHHHHHHhhhcCCCCCCCCceEEEEc-----CCChhHHHHHHHHcCCCcch
Q 047978 202 ADNIDKFLAESFDQVSLNDHDWNSLFWMMH-----PIGPAVLDQIEGKLGLEKTK 251 (320)
Q Consensus 202 ~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h-----~~~~~~~~~~~~~lg~~~e~ 251 (320)
.+...++++++|+++|++++||| .++.- .........+...+|++...
T Consensus 27 ~~La~~A~~~AL~dAgl~~~dID--~vi~g~~~~~~~~~~~~~~~~~~~gl~~~~ 79 (393)
T PRK05790 27 VELGAIVIKAALERAGVPPEQVD--EVIMGQVLQAGAGQNPARQAALKAGLPVEV 79 (393)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC--eEEEEEecCCCCCCcHHHHHHHHcCCCCCC
Confidence 45567888999999999999985 33221 11222223345567776443
No 253
>PF03702 UPF0075: Uncharacterised protein family (UPF0075); InterPro: IPR005338 Anhydro-N-acetylmuramic acid kinase catalyzes the specific phosphorylation of 1,6-anhydro-N-acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. It is also required for the utilisation of anhMurNAc, either imported from the medium, or derived from its own cell wall murein, and in so doing plays a role in cell wall recycling [, ]. ; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0006040 amino sugar metabolic process, 0009254 peptidoglycan turnover; PDB: 3QBX_B 3QBW_A 3CQY_B.
Probab=43.17 E-value=20 Score=33.78 Aligned_cols=54 Identities=20% Similarity=0.188 Sum_probs=36.6
Q ss_pred ccchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCC----------CHHHHHHHHcCCCc
Q 047978 53 VPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMP----------GADYQLTKLLGLKP 106 (320)
Q Consensus 53 ~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p----------~~a~~l~~~LGl~~ 106 (320)
+....++-.+|+++.|+++++++++||+|=....|-++.| +....|++++|++-
T Consensus 63 ~~~lg~~~a~av~~~l~~~~i~~~~I~~IgsHGQTv~H~P~~~~~~TlQiG~~~~iA~~tgi~v 126 (364)
T PF03702_consen 63 DRELGELFADAVNQFLKKNGISPSDIDLIGSHGQTVFHRPEGQHPFTLQIGDPAVIAERTGITV 126 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHCT--GGGEEEEEE--EEEEEECCCTTTEEEEES-HHHHHHHHSS-E
T ss_pred HHHHHHHHHHHHHHHHHHcCCCcccccEEEeCCcceecCcCCCCCceEecCCHHHHHHHHCcCE
Confidence 3344567789999999999999999998855555544444 35688999999874
No 254
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=43.02 E-value=33 Score=31.27 Aligned_cols=32 Identities=16% Similarity=0.102 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCC
Q 047978 57 PKLGKEAVSKAIKEWGQPISKITHLISCSVSG 88 (320)
Q Consensus 57 ~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~ 88 (320)
.+...++++++|+++|+.++|||.++......
T Consensus 204 ~~~~~~~i~~al~~agl~~~did~~~~h~~~~ 235 (332)
T cd00825 204 AEGLARAAKEALAVAGLTVWDIDYLVAHGTGT 235 (332)
T ss_pred HHHHHHHHHHHHHHcCCCHhHCCEEEccCCCC
Confidence 35566899999999999999999887665544
No 255
>TIGR03285 methan_mark_14 putative methanogenesis marker protein 14. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=42.83 E-value=38 Score=31.77 Aligned_cols=45 Identities=16% Similarity=0.227 Sum_probs=34.9
Q ss_pred ccchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCC--CCCCCHHHH
Q 047978 53 VPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSG--VDMPGADYQ 97 (320)
Q Consensus 53 ~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~--~~~p~~a~~ 97 (320)
.|+..+|...-..+++++++++.+|+|+++=.|-.- +..|.....
T Consensus 62 resV~elV~dtl~e~~k~A~l~i~DL~FVVRSTGV~Agf~speevg~ 108 (445)
T TIGR03285 62 RESVAELVKDTLKESLKKAGLDIDDLDFVVRSTGVTAGFASPEEVGE 108 (445)
T ss_pred HHHHHHHHHHHHHHHHHHcCCChhhccEEEeccceeeccCCHHHHHH
Confidence 577889999999999999999999999887554332 566644333
No 256
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=42.26 E-value=25 Score=33.43 Aligned_cols=41 Identities=29% Similarity=0.246 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCC
Q 047978 60 GKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGL 104 (320)
Q Consensus 60 a~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl 104 (320)
...|++++|+++|++|+|||++=+.- .++.......+.||+
T Consensus 284 ~~~a~~~al~~Agl~~~DId~~El~d----~F~~~~l~~~e~lg~ 324 (387)
T PRK08947 284 PVPATQKALKRAGLSISDIDVFELNE----AFAAQSLPCLKDLGL 324 (387)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecc----cchHHHHHHHHHcCC
Confidence 57899999999999999999875333 334445556678887
No 257
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=42.17 E-value=15 Score=35.15 Aligned_cols=42 Identities=19% Similarity=0.200 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCC
Q 047978 60 GKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLK 105 (320)
Q Consensus 60 a~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~ 105 (320)
...|+++||+++|++++|||++=. ...++...-.-.+.||+.
T Consensus 305 ~~~a~~~al~~Agi~~~did~~ei----~d~f~~~~l~~le~lg~~ 346 (406)
T PRK07851 305 PVEASKQALARAGMSIDDIDLVEI----NEAFAAQVLPSARELGID 346 (406)
T ss_pred HHHHHHHHHHHhCCCHHHCCeehh----hhHHHHHHHHHHHHhCCC
Confidence 568999999999999999998732 122333333444778874
No 258
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=42.05 E-value=16 Score=34.72 Aligned_cols=44 Identities=11% Similarity=0.046 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCc
Q 047978 59 LGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKP 106 (320)
Q Consensus 59 la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~ 106 (320)
-...|++++|+++|++++|||++-+.- .++...-...+.||+..
T Consensus 286 ~~~~a~~~al~~agl~~~did~~ei~d----~F~~~~l~~~e~lg~~~ 329 (387)
T PRK07850 286 GPVQATAKVLEKAGMKIGDIDLVEINE----AFASVVLSWAQVHEPDM 329 (387)
T ss_pred hHHHHHHHHHHHcCCCHHHcCeeeecc----cchHHHHHHHHHcCCCC
Confidence 357899999999999999999886533 23333344457888753
No 259
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=41.70 E-value=43 Score=31.77 Aligned_cols=46 Identities=17% Similarity=0.145 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHcCCC--CCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcc
Q 047978 58 KLGKEAVSKAIKEWGQP--ISKITHLISCSVSGVDMPGADYQLTKLLGLKPS 107 (320)
Q Consensus 58 ~la~~Aa~~aL~~ag~~--~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~ 107 (320)
.....|+++|++++|++ ++|||++-...+ ++.......+.||+.+.
T Consensus 255 ~~~~~a~~~a~~~Agi~~p~~Did~~el~d~----F~~~~~~~~e~lGl~~~ 302 (386)
T PRK08313 255 QAGRDAAAALWKAAGITDPRDEIDVAEIYVP----FSWFEPMWLENLGFAPE 302 (386)
T ss_pred HHHHHHHHHHHHHcCCCCChhhCCEEEeccC----ChHHHHHHHHHcCCCCC
Confidence 44568999999999997 699997755443 33444556788888653
No 260
>PF12633 Adenyl_cycl_N: Adenylate cyclase NT domain; InterPro: IPR024685 Adenylate cyclase is the enzyme responsible for the synthesis of cAMP from ATP. On the basis of sequence similarity, it has been proposed that there are three different classes of adenylate cyclases [, ]. Class I cyclases are found in enterobacteria and related Gram-negative bacteria. This entry represents the N-terminal domain of class-I adenylate cyclases.
Probab=40.63 E-value=46 Score=28.65 Aligned_cols=58 Identities=22% Similarity=0.395 Sum_probs=36.8
Q ss_pred CCCCceEEEEcCCCh------------hHHHHHHHHcC-------CCcchhhhhHHHH-hccCCcccchHHHHHHHHHHh
Q 047978 221 HDWNSLFWMMHPIGP------------AVLDQIEGKLG-------LEKTKLRETRHVL-SEYGNMASATVLFVLDEMRKR 280 (320)
Q Consensus 221 ~d~~~~~~i~h~~~~------------~~~~~~~~~lg-------~~~e~~~~~~~~~-~~~Gn~~sasi~~~L~~~~~~ 280 (320)
+|+ +.|++|+... ..++.+++.+| ++++++..+...- -.-=|+|||=-++-|++..++
T Consensus 115 SDl--DiWvCh~~~L~~~~~~~Lq~K~~~i~~WA~~~gvEv~FfLmd~~~fr~~~~~~~~~~E~~GSaQh~LLLdEFYRT 192 (204)
T PF12633_consen 115 SDL--DIWVCHDSDLSPEERQLLQQKCDLIEQWAASFGVEVHFFLMDEERFRHNRSGSPLTGESCGSAQHLLLLDEFYRT 192 (204)
T ss_pred CCC--eEEEEcCCCCCHHHHHHHHHHHHHHHHHHHHcCCEEEEEEECHHHHhcCCcccCCCCCCChHHHHHHHHHHHHHH
Confidence 454 3677887653 23455666677 4456666541111 112479999999999999987
No 261
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=39.99 E-value=14 Score=35.39 Aligned_cols=42 Identities=17% Similarity=0.166 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCC
Q 047978 60 GKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLK 105 (320)
Q Consensus 60 a~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~ 105 (320)
...|++++|+++|++|+|||++-.. +.++.......+.||+.
T Consensus 298 ~~~a~~~al~~Agl~~~DID~~ei~----D~f~~~~l~~~e~lG~~ 339 (400)
T TIGR02430 298 PVPATQKLLARAGLSIDQFDVIELN----EAFAAQALAVLRELGLA 339 (400)
T ss_pred HHHHHHHHHHHhCCCHHHCCCcccC----cHHHHHHHHHHHHcCCC
Confidence 4689999999999999999987521 23344455667788873
No 262
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=39.53 E-value=15 Score=35.21 Aligned_cols=41 Identities=15% Similarity=0.220 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCC
Q 047978 60 GKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGL 104 (320)
Q Consensus 60 a~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl 104 (320)
...|++++|+++|++|+|||++-. ...+........+.||+
T Consensus 298 ~~~A~~~al~~AGl~~~DID~iei----~dafa~~~l~~~e~lg~ 338 (400)
T PRK13359 298 PAPATQKLLARLGMTLDQFDVIEL----NEAFASQGLAVLRELGL 338 (400)
T ss_pred HHHHHHHHHHHhCCCHHHcCcCcc----CcHhHHHHHHHHHHcCC
Confidence 468999999999999999998762 12333344556678887
No 263
>COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=39.19 E-value=36 Score=29.60 Aligned_cols=51 Identities=12% Similarity=0.072 Sum_probs=35.9
Q ss_pred chHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCC-C----CCCCHHHHHHHHcCCC
Q 047978 55 KVPKLGKEAVSKAIKEWGQPISKITHLISCSVSG-V----DMPGADYQLTKLLGLK 105 (320)
Q Consensus 55 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~-~----~~p~~a~~l~~~LGl~ 105 (320)
.-.+....+.+++|.++|++..|+|.|.++.--+ | ..=+.|.-++-.+|++
T Consensus 36 ~hse~l~~~i~~ll~~~~~~~~dld~iav~~GPGSFTGlRIG~~~AkgLA~~l~ip 91 (220)
T COG1214 36 NHAERLMPMIDELLKEAGLSLQDLDAIAVAKGPGSFTGLRIGVAFAKGLALALNIP 91 (220)
T ss_pred cHHHHHHHHHHHHHHHcCCCHHHCCEEEEccCCCcccchhhHHHHHHHHHHHcCCC
Confidence 4456778889999999999999999997664333 2 2224455566666665
No 264
>PRK14878 UGMP family protein; Provisional
Probab=38.44 E-value=52 Score=30.42 Aligned_cols=45 Identities=18% Similarity=0.138 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEeeCC-CCCC-----CHHHHHHHHcCCC
Q 047978 60 GKEAVSKAIKEWGQPISKITHLISCSVSG-VDMP-----GADYQLTKLLGLK 105 (320)
Q Consensus 60 a~~Aa~~aL~~ag~~~~dId~li~~s~t~-~~~p-----~~a~~l~~~LGl~ 105 (320)
-..+.+++|+++|++++|||.|.+. ..| .... +.|..++..++.+
T Consensus 48 l~~~i~~~l~~a~~~~~did~Iavt-~gPG~~~~lrvg~~~Ak~la~~~~~p 98 (323)
T PRK14878 48 APELLRKALEKAGISIEDIDAVAVS-QGPGLGPALRVGATAARALALKYNKP 98 (323)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEe-cCCCcccchHHHHHHHHHHHHHhCCC
Confidence 3478999999999999999977554 444 2211 2356666677765
No 265
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=37.32 E-value=37 Score=29.31 Aligned_cols=43 Identities=12% Similarity=0.143 Sum_probs=29.7
Q ss_pred cCCcccchHHHHHHHHHHhchhcCCCCCCCCCceEEEEeeccchhhhhee
Q 047978 262 YGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEAIV 311 (320)
Q Consensus 262 ~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~~ 311 (320)
.|+-.+-+.|...+.+++. =+++|| ++||=+|.|+|+..+.+.
T Consensus 49 i~~~~~is~P~~~a~~l~~----L~l~pg---~~VLeIGtGsGY~aAlla 91 (209)
T PF01135_consen 49 IGCGQTISAPSMVARMLEA----LDLKPG---DRVLEIGTGSGYQAALLA 91 (209)
T ss_dssp EETTEEE--HHHHHHHHHH----TTC-TT----EEEEES-TTSHHHHHHH
T ss_pred ecceeechHHHHHHHHHHH----HhcCCC---CEEEEecCCCcHHHHHHH
Confidence 3544677888888888887 458999 999999999999876443
No 266
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=37.20 E-value=81 Score=30.13 Aligned_cols=53 Identities=11% Similarity=0.046 Sum_probs=34.3
Q ss_pred chhHHHHHHHHhhhcCCCCCCCCceEE--EEcCC--ChhHHHHHHHHcCCCcchhhh
Q 047978 202 ADNIDKFLAESFDQVSLNDHDWNSLFW--MMHPI--GPAVLDQIEGKLGLEKTKLRE 254 (320)
Q Consensus 202 ~~~~~~~i~~~l~~~g~~~~d~~~~~~--i~h~~--~~~~~~~~~~~lg~~~e~~~~ 254 (320)
.+...++++++|+++|++++||+.+++ +.+.. +..+...+...+|+|.+.-..
T Consensus 27 ~eL~~~a~~~al~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Glp~~~p~~ 83 (401)
T PRK08131 27 DDLAATVIRRLLEKSGFPGDDIEDVILGCTNQAGEDSRNVARNALLLAGLPVTVPGQ 83 (401)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHhcCCCCCCcee
Confidence 466678899999999999998853222 11111 133455577889998655444
No 267
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=37.19 E-value=21 Score=34.19 Aligned_cols=23 Identities=13% Similarity=0.115 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEE
Q 047978 60 GKEAVSKAIKEWGQPISKITHLI 82 (320)
Q Consensus 60 a~~Aa~~aL~~ag~~~~dId~li 82 (320)
..++.+++|+++|++|+|||+|-
T Consensus 283 ~~~a~~~Al~~Agi~~~dId~v~ 305 (410)
T PRK07103 283 EMRVIRAALRRAGLGPEDIDYVN 305 (410)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEE
Confidence 35899999999999999999764
No 268
>TIGR00329 gcp_kae1 metallohydrolase, glycoprotease/Kae1 family. This subfamily includes the well-studied secreted O-sialoglycoprotein endopeptidase (glycoprotease, EC 3.4.24.57) of Pasteurella haemolytica, a pathogen. A member from Riemerella anatipestifer, associated with cohemolysin activity, likewise is exported without benefit of a classical signal peptide and shows glycoprotease activity on the test substrate glycophorin. However, archaeal members of this subfamily show unrelated activities as demonstrated in Pyrococcus abyssi: DNA binding, iron binding, apurinic endonuclease activity, genomic association with a kinase domain, and no glycoprotease activity. This family thus pulls together a set of proteins as a homology group that appears to be near-universal in life, yet heterogeneous in assayed function between bacteria and archaea.
Probab=36.40 E-value=51 Score=30.13 Aligned_cols=49 Identities=14% Similarity=0.004 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCC-----CHHHHHHHHcCCC
Q 047978 57 PKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMP-----GADYQLTKLLGLK 105 (320)
Q Consensus 57 ~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p-----~~a~~l~~~LGl~ 105 (320)
.+......+++|+++|++++|||.|.+...-+.+.. +.|..++..++.+
T Consensus 49 ~~~l~~~i~~~l~~~~~~~~did~iav~~GPG~~tglrvg~~~Ak~la~~~~~p 102 (305)
T TIGR00329 49 AENIPPLLERALIESNVDKSEIDLIAYTQGPGLGGSLRVGATFARSLALSLDKP 102 (305)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCchhhHHHHHHHHHHHHHHhCCC
Confidence 345567789999999999999998765543322211 2345555555554
No 269
>TIGR03725 bact_YeaZ universal bacterial protein YeaZ. This family describes a protein family, YeaZ, that appears to be universal in bacteria, but whose function is unknown. This family is related to the gcp (glycoprotease) protein family, also universal in bacteria and unknown in function. In Gram-positive lineages, members of these two related families often belong to the same operon, along with the ribosomal-protein-alanine acetyltransferase gene. Members of this family may occur as fusions with gcp or the ribosomal protein N-acetyltransferase rimI, and is frequently encoded next to rimI.
Probab=34.76 E-value=41 Score=28.66 Aligned_cols=30 Identities=7% Similarity=0.106 Sum_probs=24.4
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCcCEEEEEe
Q 047978 56 VPKLGKEAVSKAIKEWGQPISKITHLISCS 85 (320)
Q Consensus 56 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s 85 (320)
-++......+++|++++++++|||.|.++.
T Consensus 33 h~~~l~~~i~~~l~~~~~~~~~i~~iav~~ 62 (202)
T TIGR03725 33 HSEILLPMIEELLAEAGLSLQDLDAIAVGV 62 (202)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEec
Confidence 345556789999999999999999886654
No 270
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=34.63 E-value=1.2e+02 Score=29.21 Aligned_cols=66 Identities=9% Similarity=0.090 Sum_probs=37.4
Q ss_pred chhHHHHHHHHhhhcCCCCCCCCceEE-EEcCCC--hhHHHHHHHHcCCCcchhhhhHHHHhccCCcccchH
Q 047978 202 ADNIDKFLAESFDQVSLNDHDWNSLFW-MMHPIG--PAVLDQIEGKLGLEKTKLRETRHVLSEYGNMASATV 270 (320)
Q Consensus 202 ~~~~~~~i~~~l~~~g~~~~d~~~~~~-i~h~~~--~~~~~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi 270 (320)
.+...++++++|+++++++++|+.+.+ -..+.. ..+.+.+.-..|+|...-..+ +.+..-+|..++
T Consensus 32 ~~L~~~a~~~al~~agl~~~~Id~vi~G~~~~~~~~~~~ar~~~l~aGl~~~~p~~~---V~~~CaSG~~A~ 100 (430)
T TIGR02446 32 VDLGKMVVSELLARSEIDPKLIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYS---VTRACATSFQSA 100 (430)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCcCccchHHHHHHHhCCCCCCCchhh---hhhhhhHHHHHH
Confidence 456678899999999999998853333 111222 234444444579985443332 444343444333
No 271
>PF00814 Peptidase_M22: Glycoprotease family; InterPro: IPR000905 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M22 (clan MK). The type example being O-sialoglycoprotein endopeptidase (3.4.24.57 from EC) from Pasteurella haemolytica (Mannheimia haemolytica). O-Sialoglycoprotein endopeptidase is secreted by the bacterium P. haemolytica, and digests only proteins that are heavily sialylated, in particular those with sialylated serine and threonine residues []. Substrate proteins include glycophorin A and leukocyte surface antigens CD34, CD43, CD44 and CD45 [, ]. Removal of glycosylation, by treatment with neuraminidase, completely negates susceptibility to O-sialoglycoprotein endopeptidase digestion [, ]. Sequence similarity searches have revealed other members of the M22 family, from yeast, Mycobacterium, Haemophilus influenzae and the cyanobacterium Synechocystis []. The zinc-binding and catalytic residues of this family have not been determined, although the motif HMEGH may be a zinc-binding region [].; GO: 0004222 metalloendopeptidase activity, 0006508 proteolysis; PDB: 2A6A_A 2GEL_G 2GEM_B 1OKJ_B 3ENO_A 3EN9_B 2VWB_B 3ENH_B 2IVO_D 2IVP_A ....
Probab=33.64 E-value=46 Score=29.84 Aligned_cols=28 Identities=18% Similarity=0.179 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEEe
Q 047978 58 KLGKEAVSKAIKEWGQPISKITHLISCS 85 (320)
Q Consensus 58 ~la~~Aa~~aL~~ag~~~~dId~li~~s 85 (320)
+....+.+++|++++++++|||.|.++.
T Consensus 31 ~~L~~~i~~~l~~~~~~~~did~iavt~ 58 (268)
T PF00814_consen 31 ENLPPLIEELLKEAGISLSDIDAIAVTR 58 (268)
T ss_dssp HHHHHHHHHHHHHHTS-GGGESEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEec
Confidence 4456789999999999999999886555
No 272
>PTZ00186 heat shock 70 kDa precursor protein; Provisional
Probab=33.52 E-value=79 Score=32.44 Aligned_cols=46 Identities=13% Similarity=0.201 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCC
Q 047978 59 LGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLK 105 (320)
Q Consensus 59 la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~ 105 (320)
-....++++|+++++++++||.|+++.-+. .+|..-..|.+.+|..
T Consensus 335 r~~~~v~~~L~~a~~~~~dId~VvLVGGss-riP~V~~~l~~~fg~~ 380 (657)
T PTZ00186 335 RSIAPCKQCMKDAGVELKEINDVVLVGGMT-RMPKVVEEVKKFFQKD 380 (657)
T ss_pred HHHHHHHHHHHHcCCChhhCCEEEEECCcc-cChHHHHHHHHHhCCC
Confidence 356678899999999999999999776544 3888888899988854
No 273
>COG2377 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases [Posttranslational modification, protein turnover, chaperones]
Probab=32.45 E-value=56 Score=30.71 Aligned_cols=55 Identities=16% Similarity=0.132 Sum_probs=38.8
Q ss_pred ccchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCC----------HHHHHHHHcCCCcc
Q 047978 53 VPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPG----------ADYQLTKLLGLKPS 107 (320)
Q Consensus 53 ~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~----------~a~~l~~~LGl~~~ 107 (320)
++....+-.+|++.+|++.++.|+||+.|.+-..|-++.|. ....|++++|++..
T Consensus 68 ~~~l~~~~a~av~~ll~~~~l~~~~i~~iG~HGQTV~H~p~~~~~~t~Qlgd~~~iA~~TGi~~v 132 (371)
T COG2377 68 DRALALLHAQAVAALLAEQGLLPRDIRAIGCHGQTVLHRPPGHAPDTVQLGDGPLIAELTGITVV 132 (371)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHhCceeecCCccccCCCCCCCCceeecCchHHHHHHhCCccH
Confidence 34455667899999999999999999955443344344442 34678888888753
No 274
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=32.32 E-value=85 Score=26.49 Aligned_cols=49 Identities=8% Similarity=0.158 Sum_probs=39.1
Q ss_pred hhHHHHHHHHhhhcCCCCCCCCceEEEEcCCC---------hhHHHHHHHHcCCCcchhhh
Q 047978 203 DNIDKFLAESFDQVSLNDHDWNSLFWMMHPIG---------PAVLDQIEGKLGLEKTKLRE 254 (320)
Q Consensus 203 ~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~---------~~~~~~~~~~lg~~~e~~~~ 254 (320)
..+...+...|+..|...++ ++++||.+. +.++..+.+.++++.++.+.
T Consensus 70 ~~~~~~m~~~l~~~gv~id~---i~~Cph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~ 127 (181)
T COG0241 70 DKLHNKMLKILASQGVKIDG---ILYCPHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYV 127 (181)
T ss_pred HHHHHHHHHHHHHcCCccce---EEECCCCCCCCCcccCCChHHHHHHHHHhCCCccceEE
Confidence 44556688889999998876 599999865 57889999999888777655
No 275
>TIGR01118 lacA galactose-6-phosphate isomerase, LacA subunit. This family contains members from low GC gram-positive bacteria. Galactose-6-phosphate isomerase is involved in lactose catabolism by the tagatose-6-phosphate pathway.
Probab=32.16 E-value=40 Score=27.18 Aligned_cols=29 Identities=17% Similarity=0.234 Sum_probs=21.8
Q ss_pred HHHHHHHHhchhcCCCCCCCCCceEEEEeeccchhhhh
Q 047978 272 FVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEA 309 (320)
Q Consensus 272 ~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a 309 (320)
..+++.+.+ |+...| ||+++.|.|+++.+
T Consensus 45 ~~va~~V~~----~e~~~G-----IliCGtGiG~siaA 73 (141)
T TIGR01118 45 LAVASEVQK----DEQNLG-----IVIDAYGAGSFMVA 73 (141)
T ss_pred HHHHHHHHc----CCCceE-----EEEcCCCHhHhhhh
Confidence 455555665 766666 99999999999875
No 276
>PF02502 LacAB_rpiB: Ribose/Galactose Isomerase; InterPro: IPR003500 This entry represents the sugar isomerase enzymes ribose 5-phosphate isomerase B (rpiB), galactose isomerase subunit A (LacA) and galactose isomerase subunit B (LacB). Galactose-6-phosphate isomerase (5.3.1.26 from EC) is a heteromultimeric protein consisting of subunits LacA and LacB, and catalyses the conversion of D-galactose 6-phosphate to D-tagatose and 6-phosphate in the tagatose 6-phosphate pathway of lactose catabolism []. Galactose-6-phosphate isomerase is induced by galactose or lactose. This entry represents the LacB subunit. Ribose 5-phosphate isomerase (5.3.1.6 from EC) forms a homodimer and catalyses the interconversion of D-ribose 5-phosphate and D-ribulose 5-phosphate in the non-oxidative branch of the pentose phosphate pathway. This reaction permits the synthesis of ribose from other sugars, as well as the recycling of sugars from nucleotide breakdown. Two unrelated enzymes can catalyse this reaction: RpiA (found in most organisms) and RpiB (found in some bacteria and eukaryotes). RpiB is also involved in metabolism of the rare sugar, allose, in addition to ribose sugars. The structures of RpiA and RpiB are distinct, RpiB having a Rossmann-type alpha/beta/alpha sandwich topology [].; GO: 0005975 carbohydrate metabolic process; PDB: 3HEE_A 3HE8_A 3PH3_B 3PH4_B 3ONO_A 4EM8_B 3S5P_B 1O1X_A 2BES_D 2VVP_D ....
Probab=32.13 E-value=41 Score=27.07 Aligned_cols=31 Identities=23% Similarity=0.319 Sum_probs=23.2
Q ss_pred HHHHHHHHHHhchhcCCCCCCCCCceEEEEeeccchhhhh
Q 047978 270 VLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEA 309 (320)
Q Consensus 270 i~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a 309 (320)
.-..++..+.+ |+...| |++++.|.|+++.|
T Consensus 44 ~a~~va~~V~~----~~~d~G-----IliCgtGiG~~iaA 74 (140)
T PF02502_consen 44 FAEKVAEAVAS----GEADRG-----ILICGTGIGMSIAA 74 (140)
T ss_dssp HHHHHHHHHHT----TSSSEE-----EEEESSSHHHHHHH
T ss_pred HHHHHHHHHHc----ccCCeE-----EEEcCCChhhhhHh
Confidence 34456666666 776666 99999999999875
No 277
>TIGR03722 arch_KAE1 universal archaeal protein Kae1. This family represents the archaeal protein Kae1. Its partner Bud32 is fused with it in about half of the known archaeal genomes. The pair, which appears universal in the archaea, corresponds to EKC/KEOPS complex in eukaryotes. A recent characterization of the member from Pyrococcus abyssi, as an iron-binding, atypical DNA-binding protein with an apurinic lyase activity, challenges the common annotation of close homologs as O-sialoglycoprotein endopeptidase. The latter annotation is based on a characterized protein from the bacterium Pasteurella haemolytica.
Probab=31.85 E-value=45 Score=30.77 Aligned_cols=44 Identities=18% Similarity=0.135 Sum_probs=29.9
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCC------CHHHHHHHHcCCC
Q 047978 61 KEAVSKAIKEWGQPISKITHLISCSVSGVDMP------GADYQLTKLLGLK 105 (320)
Q Consensus 61 ~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p------~~a~~l~~~LGl~ 105 (320)
..+.+++|+++|++++|||.|.+.. -|-..+ +.+..++..++.+
T Consensus 50 ~~~i~~~l~~~~~~~~did~Iavt~-gPg~~~~l~vg~~~ak~la~~~~~p 99 (322)
T TIGR03722 50 PKLIKEALEEAGVSLEDIDAVAFSQ-GPGLGPCLRVGATAARALALKLNKP 99 (322)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEec-CCchHHhHHHHHHHHHHHHHHhCCC
Confidence 4459999999999999999886554 331111 2355666666664
No 278
>PF01890 CbiG_C: Cobalamin synthesis G C-terminus; InterPro: IPR002750 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. CbiG proteins are specific for anaerobic cobalamin biosynthesis. CbiG, which shows homology with CobE of the aerobic pathway, participates in the conversion of cobalt-precorrin 5 into cobalt-precorrin 6 []. CbiG is responsible for the opening of the delta-lactone ring and extrusion of the C2-unit []. The aerobic pathway uses molecular oxygen to trigger the events at C-20 leading to contraction and expulsion of the C2-unit as acetic acid from a metal-free intermediate, whereas the anaerobic route involves the internal delivery of oxygen from a carboxylic acid terminus to C-20 followed by extrusion of the C2-unit as acetaldehyde, using cobalt complexes as substrates []. This entry represents the core domain of CibG.; GO: 0009236 cobalamin biosynthetic process; PDB: 3BY5_A 2W6K_A 2W6L_A 3EEQ_B.
Probab=31.63 E-value=46 Score=25.99 Aligned_cols=49 Identities=27% Similarity=0.329 Sum_probs=32.8
Q ss_pred chHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCC-CCCCCHHHHHHHHcCCCc
Q 047978 55 KVPKLGKEAVSKAIKEWGQPISKITHLISCSVSG-VDMPGADYQLTKLLGLKP 106 (320)
Q Consensus 55 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~-~~~p~~a~~l~~~LGl~~ 106 (320)
...+...++.+++|++.++++.+|+.| +|... ...|. -..++++||++-
T Consensus 12 ~~~~~i~~ai~~~l~~~~~~~~~i~~i--asi~~K~~E~~-l~~~A~~l~~~~ 61 (121)
T PF01890_consen 12 APAEEIEEAIEQALAEAGLSPRSIAAI--ASIDIKADEPG-LLELAEELGIPL 61 (121)
T ss_dssp --HHHHHHHHHHHHHHCT--GGGEEEE--EESSSSS--HH-HHHHHHHCTSEE
T ss_pred CCHHHHHHHHHHHHHHcCCChhhccEE--EeccccCCCHH-HHHHHHHhCCCe
Confidence 345667889999999999999999987 55555 44554 355788888763
No 279
>KOG2708 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones]
Probab=31.63 E-value=79 Score=27.85 Aligned_cols=42 Identities=19% Similarity=0.181 Sum_probs=27.1
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCC-HHHHHHHHc
Q 047978 61 KEAVSKAIKEWGQPISKITHLISCSVSGVDMPG-ADYQLTKLL 102 (320)
Q Consensus 61 ~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~-~a~~l~~~L 102 (320)
..-.+++|++++++.+|||.|-|.--.+.-.|- ..+.+++.|
T Consensus 54 l~Lv~~al~ea~v~~~diD~icyTKGPGmgaPL~~vaivaRtl 96 (336)
T KOG2708|consen 54 LGLVKQALEEAGVTSDDIDCICYTKGPGMGAPLSVVAIVARTL 96 (336)
T ss_pred HHHHHHHHHHcCCChhhCCEEEEcCCCCCCCchhhHHHHHHHH
Confidence 455788999999999999976544333355552 234444444
No 280
>TIGR03723 bact_gcp putative glycoprotease GCP. This model represents bacterial members of a protein family that is widely distributed. In a few pathogenic species, the protein is exported in a way that may represent an exceptional secondary function. This model plus companion (archaeal) model TIGR03722 together span the prokaryotic member sequences of TIGR00329, a protein family that appears universal in life, and whose broad function is unknown. A member of TIGR03722 has been characterized as a DNA-binding protein with apurinic endopeptidase activity. In contrast, the rare characterized members of the present family show O-sialoglycoprotein endopeptidase (EC. 3.4.24.57) activity after export. These include glycoprotease (gcp) from Pasteurella haemolytica A1 and a cohemolysin from Riemerella anatipestifer (GB|AAG39646.1). The member from Staphylococcus aureus is essential and is related to cell wall dynamics and the modulation of autolysis, but members are also found in the Mycoplasmas
Probab=31.51 E-value=1.3e+02 Score=27.72 Aligned_cols=49 Identities=16% Similarity=0.088 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCC-----CHHHHHHHHcCCC
Q 047978 57 PKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMP-----GADYQLTKLLGLK 105 (320)
Q Consensus 57 ~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p-----~~a~~l~~~LGl~ 105 (320)
.+......+++|++++++.+|||.|.+..--+.+.. +.|.-++..++++
T Consensus 50 ~~~l~~~i~~~l~~~~~~~~~id~iav~~GPGsftglrig~~~Ak~la~~~~~p 103 (314)
T TIGR03723 50 LEAIPPLIEEALAEAGLTLSDIDAIAVTAGPGLIGALLVGVSFAKALALALNKP 103 (314)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecCCChHHhHHHHHHHHHHHHHHhCCC
Confidence 345577889999999999999998865443222211 3455555566654
No 281
>PF11392 DUF2877: Protein of unknown function (DUF2877); InterPro: IPR021530 This bacterial family of proteins are putative carboxylase proteins however this cannot be confirmed.
Probab=31.37 E-value=96 Score=23.73 Aligned_cols=29 Identities=21% Similarity=0.123 Sum_probs=21.1
Q ss_pred chhhhhHHHHhccCCcccchHHHHHHHHH
Q 047978 250 TKLRETRHVLSEYGNMASATVLFVLDEMR 278 (320)
Q Consensus 250 e~~~~~~~~~~~~Gn~~sasi~~~L~~~~ 278 (320)
+.+......+.++||++..+.++.+...+
T Consensus 81 ~~~~~~i~~ll~iGhTSG~D~L~Gi~~~l 109 (110)
T PF11392_consen 81 EDLEEAIRRLLAIGHTSGADTLLGILLGL 109 (110)
T ss_pred hHHHHHHHHHHHcCCCchHHHHHHHHHHh
Confidence 33333334588899999999999887665
No 282
>PRK08621 galactose-6-phosphate isomerase subunit LacA; Reviewed
Probab=30.99 E-value=43 Score=27.05 Aligned_cols=30 Identities=17% Similarity=0.217 Sum_probs=22.1
Q ss_pred HHHHHHHHHhchhcCCCCCCCCCceEEEEeeccchhhhh
Q 047978 271 LFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEA 309 (320)
Q Consensus 271 ~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a 309 (320)
-..+++.+.+ |+...| ||+++.|.|+++.+
T Consensus 44 a~~va~~V~~----~~~~~G-----IliCGTGiG~siaA 73 (142)
T PRK08621 44 TLAVAKEVNK----SEDNLG-----IVIDAYGAGSFMVA 73 (142)
T ss_pred HHHHHHHHHc----CCCceE-----EEEcCCChhhhhhh
Confidence 3455556655 666666 99999999999875
No 283
>PF09887 DUF2114: Uncharacterized protein conserved in archaea (DUF2114); InterPro: IPR008303 There are currently no experimental data for members of this group or their homologues. The exact function of this protein is unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=30.27 E-value=89 Score=29.49 Aligned_cols=46 Identities=13% Similarity=0.141 Sum_probs=35.4
Q ss_pred ccchHHHHHHHHHHHHHHcCCCCC-CcCEEEEEeeCC--CCCCCHHHHH
Q 047978 53 VPKVPKLGKEAVSKAIKEWGQPIS-KITHLISCSVSG--VDMPGADYQL 98 (320)
Q Consensus 53 ~e~~~~la~~Aa~~aL~~ag~~~~-dId~li~~s~t~--~~~p~~a~~l 98 (320)
.|+..+|...-..+++++++++.+ |+|+++=.|-.- +..|.....+
T Consensus 64 rEsV~elVrdtl~e~~k~A~l~i~~DL~FVVRSTGVvAgf~speevg~~ 112 (448)
T PF09887_consen 64 RESVAELVRDTLLESHKKAHLDIKKDLDFVVRSTGVVAGFDSPEEVGEF 112 (448)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCccccceEEEeecceeeccCCHHHHHHH
Confidence 578899999999999999999998 999887554332 6666544333
No 284
>PRK05183 hscA chaperone protein HscA; Provisional
Probab=30.06 E-value=84 Score=31.94 Aligned_cols=45 Identities=13% Similarity=0.213 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCC
Q 047978 60 GKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLK 105 (320)
Q Consensus 60 a~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~ 105 (320)
..+.++++|+++++.+++||.|+.+.-+. .+|.....|.+.+|..
T Consensus 311 ~~~~i~~~L~~a~~~~~~i~~ViLvGGss-riP~v~~~l~~~fg~~ 355 (616)
T PRK05183 311 TLLACRRALRDAGVEADEVKEVVMVGGST-RVPLVREAVGEFFGRT 355 (616)
T ss_pred HHHHHHHHHHHcCCCcccCCEEEEECCcc-cChHHHHHHHHHhccC
Confidence 56678899999999999999999876554 3788888888888754
No 285
>PRK06065 acetyl-CoA acetyltransferase; Provisional
Probab=29.97 E-value=1.5e+02 Score=28.25 Aligned_cols=47 Identities=9% Similarity=-0.024 Sum_probs=29.8
Q ss_pred chhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChh-----HHHHHHHHcCCCc
Q 047978 202 ADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPA-----VLDQIEGKLGLEK 249 (320)
Q Consensus 202 ~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~-----~~~~~~~~lg~~~ 249 (320)
.+...++++++|+++|++++||| ..++...++.. .-..+.+.+|+..
T Consensus 30 ~~L~~~A~~~Al~dagl~~~dID-~~i~~~~~~~~~~~~~~a~~l~~~lG~~~ 81 (392)
T PRK06065 30 QELAWEAASKALDEAGLELKDID-CVVIGSAPDAFDGVHMKGEYLSHGSGGIR 81 (392)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-EEEEeccCCcccccccHHHHHHHHcCCCC
Confidence 45567889999999999999984 23333222211 3344677787653
No 286
>PF14574 DUF4445: Domain of unknown function (DUF4445); PDB: 3ZYY_X.
Probab=29.72 E-value=22 Score=34.09 Aligned_cols=42 Identities=19% Similarity=0.226 Sum_probs=26.3
Q ss_pred HHHHHHHHHcCCCCCCcCEEEEEeeCC-CCCCCHHHHHHHHcCCCcc
Q 047978 62 EAVSKAIKEWGQPISKITHLISCSVSG-VDMPGADYQLTKLLGLKPS 107 (320)
Q Consensus 62 ~Aa~~aL~~ag~~~~dId~li~~s~t~-~~~p~~a~~l~~~LGl~~~ 107 (320)
.+.+-+|+++|++++|||.|+.+...+ |..|.. +.++|+=|.
T Consensus 312 aGi~~Ll~~agi~~~di~~v~lAG~FG~~l~~~~----a~~iGLlP~ 354 (412)
T PF14574_consen 312 AGIEILLEEAGISPEDIDRVYLAGGFGNYLDPES----AIRIGLLPD 354 (412)
T ss_dssp HHHHHHHHHTT--GGG--EEEEECSS-SEEEHHH----HHHTTSS--
T ss_pred HHHHHHHHHcCCCHHHccEEEEeCcccccCCHHH----HhhcCCCCC
Confidence 345678899999999999999999888 666553 346686543
No 287
>TIGR00689 rpiB_lacA_lacB sugar-phosphate isomerases, RpiB/LacA/LacB family. Proteins of known function in this family act as sugar (pentose and/or hexose)-phosphate isomerases, including the LacA and LacB subunits of galactose-6-phosphate isomerases from Gram-positive bacteria and RpiB. RpiB is the second ribose phosphate isomerase of E. coli. It lacks homology to RpiA, its inducer is unknown (but is not ribose), and it can be replaced by the homologous galactose-6-phosphate isomerase of Streptococcus mutans, all of which suggests that the ribose phosphate isomerase activity of RpiB is a secondary function. On the other hand, there appear to be a significant number of species which contain rpiB, lack rpiA and seem to require rpi activity in order to copplete the pentose phosphate pathway.
Probab=29.70 E-value=46 Score=26.97 Aligned_cols=29 Identities=17% Similarity=0.340 Sum_probs=22.2
Q ss_pred HHHHHHHHhchhcCCCCCCCCCceEEEEeeccchhhhh
Q 047978 272 FVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEA 309 (320)
Q Consensus 272 ~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a 309 (320)
..++..+.+ |+...| |++++.|.|+++.+
T Consensus 45 ~~va~~V~~----g~~~~G-----IliCGtGiG~siaA 73 (144)
T TIGR00689 45 KLVADKVVA----GEVSLG-----ILICGTGIGMSIAA 73 (144)
T ss_pred HHHHHHHHc----CCCceE-----EEEcCCcHHHHHHH
Confidence 455666666 777666 99999999999775
No 288
>PRK05571 ribose-5-phosphate isomerase B; Provisional
Probab=29.64 E-value=44 Score=27.18 Aligned_cols=30 Identities=23% Similarity=0.298 Sum_probs=22.1
Q ss_pred HHHHHHHHhchhcCCCCCCCCCceEEEEeeccchhhhhe
Q 047978 272 FVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEAI 310 (320)
Q Consensus 272 ~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~ 310 (320)
..++..+.+ |+...| |++++.|.|+++.+-
T Consensus 48 ~~va~~V~~----g~~~~G-----IliCGtGiG~siaAN 77 (148)
T PRK05571 48 KKVAEAVVA----GEADRG-----ILICGTGIGMSIAAN 77 (148)
T ss_pred HHHHHHHHc----CCCCEE-----EEEcCCcHHHHHHHh
Confidence 455555665 766666 999999999998753
No 289
>PRK13410 molecular chaperone DnaK; Provisional
Probab=29.20 E-value=87 Score=32.19 Aligned_cols=48 Identities=19% Similarity=0.172 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCC
Q 047978 57 PKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLK 105 (320)
Q Consensus 57 ~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~ 105 (320)
.+-..+..+++|+++|+.+++||.|+.+.-+. -+|..-..|.+.+|..
T Consensus 308 ~~r~~~~i~~~L~~ag~~~~dId~VvLVGGss-RiP~V~~~l~~~fg~~ 355 (668)
T PRK13410 308 LDRLLRPVKRALKDAGLSPEDIDEVVLVGGST-RMPMVQQLVRTLIPRE 355 (668)
T ss_pred HHHHHHHHHHHHHHcCCChhhCcEEEEECCcc-ccHHHHHHHHHHcCCC
Confidence 33466778899999999999999988775544 3788888888888854
No 290
>PF07736 CM_1: Chorismate mutase type I; InterPro: IPR008243 Chorismate mutase (CM; 5.4.99.5 from EC) catalyses the reaction at the branch point of the biosynthetic pathway leading to the three aromatic amino acids, phenylalanine, tryptophan and tyrosine (chorismic acid is the last common intermediate, and CM leads to the L-phenylalanine/L-tyrosine branch). It is part of the shikimate pathway, which is present only in bacteria, fungi and plants. This entry represents a family of monofunctional (non-fused) chorismate mutases from Gram-positive bacteria (Firmicutes) and cyanobacteria. Trusted members of the family are found in operons with other enzymes of the chorismate pathways, both up- and downstream of CM (Listeria, Bacillus, Oceanobacillus) or are the sole CM in the genome where the other members of the chorismate pathways are found elsewhere in the genome (Nostoc, Thermosynechococcus). They are monofunctional, homotrimeric, nonallosteric enzymes and are not regulated by the end-product aromatic amino acids. The three types of CM are AroQ class, Prokaryotic type (e.g., IPR008239 from INTERPRO amongst others); AroQ class, Eukaryotic type (IPR008238 from INTERPRO); and AroH class. They fall into two structural folds (AroQ class and AroH class) which are completely unrelated []. The two types of the AroQ structural class (the Escherichia coli CM dimer and the yeast CM monomer) can be structurally superimposed, and the topology of the four-helix bundle forming the active site is conserved []. For additional information please see [, , , , , , ].; PDB: 2CHS_K 2CHT_L 1COM_J 1FNJ_A 1FNK_A 1DBF_C 1UI9_A 1ODE_A 1UFY_A 1XHO_C ....
Probab=29.19 E-value=1e+02 Score=24.11 Aligned_cols=43 Identities=16% Similarity=0.236 Sum_probs=25.8
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEEeeCC--CCCCCHHHHHHHHc-CCCc
Q 047978 61 KEAVSKAIKEWGQPISKITHLISCSVSG--VDMPGADYQLTKLL-GLKP 106 (320)
Q Consensus 61 ~~Aa~~aL~~ag~~~~dId~li~~s~t~--~~~p~~a~~l~~~L-Gl~~ 106 (320)
.+-.++.+++.+++++||--++|..+.- -.+|+.+. +++ |+..
T Consensus 23 ~eLl~~i~~~N~l~~~dIvSi~FT~T~DL~a~fPA~a~---R~~~g~~~ 68 (118)
T PF07736_consen 23 RELLEEILERNELSPEDIVSIIFTVTPDLDAAFPAAAA---RELPGWDD 68 (118)
T ss_dssp HHHHHHHHHHTT--GGGEEEEEEEE-TT--SS-TCHHH---HHTTTGTT
T ss_pred HHHHHHHHHHcCCCHHHEEEEEEEeCCCcCccChHHHH---HccCCCCc
Confidence 4445677888999999999887654443 36777554 444 6554
No 291
>TIGR01120 rpiB ribose 5-phosphate isomerase B. Involved in the non-oxidative branch of the pentose phospate pathway.
Probab=29.03 E-value=48 Score=26.81 Aligned_cols=29 Identities=17% Similarity=0.243 Sum_probs=21.6
Q ss_pred HHHHHHHHhchhcCCCCCCCCCceEEEEeeccchhhhh
Q 047978 272 FVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEA 309 (320)
Q Consensus 272 ~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a 309 (320)
...+..+.+ |....| |++++.|.|+++.+
T Consensus 46 ~~va~~V~~----~~~~~G-----IliCGtGiG~siaA 74 (143)
T TIGR01120 46 KQVALAVAG----GEVDGG-----ILICGTGIGMSIAA 74 (143)
T ss_pred HHHHHHHHC----CCCceE-----EEEcCCcHHHHHHH
Confidence 345555655 666666 99999999999875
No 292
>PRK07027 cobalamin biosynthesis protein CbiG; Provisional
Probab=29.02 E-value=86 Score=24.62 Aligned_cols=48 Identities=13% Similarity=0.083 Sum_probs=34.0
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCC-CCCCCHHHHHHHHcCCCc
Q 047978 56 VPKLGKEAVSKAIKEWGQPISKITHLISCSVSG-VDMPGADYQLTKLLGLKP 106 (320)
Q Consensus 56 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~-~~~p~~a~~l~~~LGl~~ 106 (320)
..+...++.+++|++.|+.+.+|+.| +|... -..|+ -..++++||++-
T Consensus 15 ~~e~i~~ai~~~L~~~~l~~~si~~l--asi~~K~~E~~-L~~~A~~lg~pl 63 (126)
T PRK07027 15 PAEQIEAAIRAALAQRPLASADVRVV--ATLDLKADEAG-LLALCARHGWPL 63 (126)
T ss_pred CHHHHHHHHHHHHHHcCCCHHHhhee--EehhhhcCCHH-HHHHHHHhCCCe
Confidence 34556889999999999999999977 44443 34444 345777788763
No 293
>TIGR01991 HscA Fe-S protein assembly chaperone HscA. The Heat Shock Cognate proteins HscA and HscB act together as chaperones. HscA resembles DnaK but belongs in a separate clade. The apparent function is to aid assembly of iron-sulfur cluster proteins. Homologs from Buchnera and Wolbachia are clearly in the same clade but are highly derived and score lower than some examples of DnaK.
Probab=28.93 E-value=1e+02 Score=31.18 Aligned_cols=47 Identities=17% Similarity=0.282 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCC
Q 047978 58 KLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLK 105 (320)
Q Consensus 58 ~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~ 105 (320)
+=..+.++++|+++++.+++||.|+++.-+. .+|.....|.+.+|..
T Consensus 293 ~~i~~~i~~~L~~a~~~~~~id~ViLvGGss-riP~V~~~l~~~f~~~ 339 (599)
T TIGR01991 293 QKTLSICRRALRDAGLSVEEIKGVVLVGGST-RMPLVRRAVAELFGQE 339 (599)
T ss_pred HHHHHHHHHHHHHcCCChhhCCEEEEECCcC-CChHHHHHHHHHhCCC
Confidence 3356778999999999999999998776544 4788888898888754
No 294
>CHL00094 dnaK heat shock protein 70
Probab=28.73 E-value=86 Score=31.84 Aligned_cols=47 Identities=26% Similarity=0.273 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCC
Q 047978 58 KLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLK 105 (320)
Q Consensus 58 ~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~ 105 (320)
+-.....+++|+++++.+++||.|+.+.-+. .+|..-..|.+.+|..
T Consensus 309 ~~~~~~i~~~L~~a~~~~~~i~~ViLvGGss-riP~v~~~l~~~fg~~ 355 (621)
T CHL00094 309 NRCRIPVENALKDAKLDKSDIDEVVLVGGST-RIPAIQELVKKLLGKK 355 (621)
T ss_pred HHHHHHHHHHHHHcCCChhhCcEEEEECCcc-CChHHHHHHHHHhCCC
Confidence 3356667899999999999999999876554 4888888899888854
No 295
>PRK13411 molecular chaperone DnaK; Provisional
Probab=28.30 E-value=78 Score=32.41 Aligned_cols=44 Identities=23% Similarity=0.313 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCC
Q 047978 60 GKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGL 104 (320)
Q Consensus 60 a~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl 104 (320)
..+..+++|+++++.+++||.|+.+.-+. .+|..-..|.+.+|-
T Consensus 310 ~~~~i~~~L~~a~~~~~~id~ViLvGGss-riP~v~~~l~~~f~~ 353 (653)
T PRK13411 310 TIEPMQQALKDAGLKPEDIDRVILVGGST-RIPAVQEAIQKFFGG 353 (653)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEEECCCC-CcchHHHHHHHHcCC
Confidence 56778899999999999999988776544 488888889988863
No 296
>PF05378 Hydant_A_N: Hydantoinase/oxoprolinase N-terminal region; InterPro: IPR008040 This domain is found at the N terminus of the hydantoinase/oxoprolinase IPR002821 from INTERPRO family.
Probab=28.28 E-value=37 Score=28.37 Aligned_cols=32 Identities=19% Similarity=0.081 Sum_probs=25.9
Q ss_pred chHHHHHHHHHHHHHHcCCCCCCcCEEEEEee
Q 047978 55 KVPKLGKEAVSKAIKEWGQPISKITHLISCSV 86 (320)
Q Consensus 55 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~ 86 (320)
+...=..+|.++++++.++++++|+.++++|+
T Consensus 34 d~~~gi~~al~~l~~~~~~~~~~i~~v~~gTT 65 (176)
T PF05378_consen 34 DPAEGILEALDALLEESGIDPSDIDRVRHGTT 65 (176)
T ss_pred CHHHHHHHHHHhhhcccCCChhhCcEEEeccH
Confidence 34444577888999999999999999998884
No 297
>PRK12613 galactose-6-phosphate isomerase subunit LacA; Provisional
Probab=27.37 E-value=55 Score=26.43 Aligned_cols=29 Identities=14% Similarity=0.196 Sum_probs=21.5
Q ss_pred HHHHHHHHhchhcCCCCCCCCCceEEEEeeccchhhhh
Q 047978 272 FVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEA 309 (320)
Q Consensus 272 ~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a 309 (320)
..++..+.+ |....| |++++.|.|+++.+
T Consensus 44 ~~va~~V~~----~e~~~G-----IliCGtGiG~siaA 72 (141)
T PRK12613 44 LAVAKAVNE----AEGRLG-----IMVDAYGAGPFMVA 72 (141)
T ss_pred HHHHHHHHc----CCCceE-----EEEcCCCHhHhhhh
Confidence 355555655 666666 99999999999775
No 298
>COG0533 QRI7 Metal-dependent proteases with possible chaperone activity [Posttranslational modification, protein turnover, chaperones]
Probab=27.28 E-value=1.2e+02 Score=28.28 Aligned_cols=45 Identities=16% Similarity=0.076 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCC------HHHHHHHHcCCC
Q 047978 60 GKEAVSKAIKEWGQPISKITHLISCSVSGVDMPG------ADYQLTKLLGLK 105 (320)
Q Consensus 60 a~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~------~a~~l~~~LGl~ 105 (320)
.....+++|+++|++.+|||+| -.|..|=..++ .|..++-.++.+
T Consensus 54 i~~li~~al~eA~~~~~dID~I-A~T~gPGL~gaL~VG~~~Ak~LA~a~~kP 104 (342)
T COG0533 54 IPPLIEEALAEAGVSLEDIDAI-AVTAGPGLGGALLVGATAAKALALALNKP 104 (342)
T ss_pred HHHHHHHHHHHcCCCcccCCEE-EEecCCCchhHHHHHHHHHHHHHHHhCCC
Confidence 4667899999999999999976 45555522332 334455555544
No 299
>PRK12615 galactose-6-phosphate isomerase subunit LacB; Reviewed
Probab=27.07 E-value=53 Score=27.41 Aligned_cols=31 Identities=19% Similarity=0.158 Sum_probs=22.5
Q ss_pred HHHHHHHHHhchhcCCCCCCCCCceEEEEeeccchhhhhe
Q 047978 271 LFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEAI 310 (320)
Q Consensus 271 ~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~ 310 (320)
-..++..+.+ |....| ||+++.|.|+++.|-
T Consensus 46 a~~va~~V~~----g~~d~G-----IliCGTGiG~siaAN 76 (171)
T PRK12615 46 GKKVGEAVVN----GQADLG-----VCICGTGVGINNAVN 76 (171)
T ss_pred HHHHHHHHHc----CCCCEE-----EEEcCCcHHHHHHHh
Confidence 3455566666 666666 999999999998753
No 300
>PTZ00340 O-sialoglycoprotein endopeptidase-like protein; Provisional
Probab=27.03 E-value=1.2e+02 Score=28.34 Aligned_cols=45 Identities=18% Similarity=0.002 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCC------CHHHHHHHHcCCC
Q 047978 60 GKEAVSKAIKEWGQPISKITHLISCSVSGVDMP------GADYQLTKLLGLK 105 (320)
Q Consensus 60 a~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p------~~a~~l~~~LGl~ 105 (320)
-....+++|+++|++++|||.|. +|..|-..+ +.|.-++..++.+
T Consensus 53 l~~~i~~~l~~a~~~~~did~Ia-vt~GPGl~~~LrVG~~~Ak~LA~a~~~P 103 (345)
T PTZ00340 53 ILSLVKEALEEAKITPSDISLIC-YTKGPGMGAPLSVGAVVARTLSLLWGKP 103 (345)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEE-EecCCCcHhhHHHHHHHHHHHHHHcCCC
Confidence 45668899999999999999775 444442222 2355666666665
No 301
>PLN03184 chloroplast Hsp70; Provisional
Probab=26.98 E-value=97 Score=31.86 Aligned_cols=47 Identities=21% Similarity=0.261 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCC
Q 047978 58 KLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLK 105 (320)
Q Consensus 58 ~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~ 105 (320)
+-..+..+++|++++++++|||.|+.+.-+. .+|..-..|.+.+|..
T Consensus 346 ~r~~~~i~~~L~~a~~~~~dId~ViLvGGss-riP~V~~~i~~~fg~~ 392 (673)
T PLN03184 346 DRCKTPVENALRDAKLSFKDIDEVILVGGST-RIPAVQELVKKLTGKD 392 (673)
T ss_pred HHHHHHHHHHHHHcCCChhHccEEEEECCcc-ccHHHHHHHHHHhCCC
Confidence 3356678899999999999999999876554 3888888899888754
No 302
>PRK08622 galactose-6-phosphate isomerase subunit LacB; Reviewed
Probab=26.74 E-value=54 Score=27.37 Aligned_cols=30 Identities=20% Similarity=0.228 Sum_probs=22.1
Q ss_pred HHHHHHHHhchhcCCCCCCCCCceEEEEeeccchhhhhe
Q 047978 272 FVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEAI 310 (320)
Q Consensus 272 ~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~ 310 (320)
..++..+.+ |....| ||+++.|.|+++.|-
T Consensus 47 ~~va~~V~~----g~~d~G-----IliCGTGiG~siaAN 76 (171)
T PRK08622 47 KKVGEAVAS----GEADLG-----VCICGTGVGISNAVN 76 (171)
T ss_pred HHHHHHHHc----CCCcEE-----EEEcCCcHHHHHHHh
Confidence 455555655 666666 999999999998763
No 303
>KOG1392 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=26.41 E-value=51 Score=29.91 Aligned_cols=97 Identities=21% Similarity=0.255 Sum_probs=53.3
Q ss_pred HHHHhhhcCCCCCCCCceEEEEcCCC-hhHH--------HHHHHH-c------CCCc-chhhhhHHHHhccCCcccchHH
Q 047978 209 LAESFDQVSLNDHDWNSLFWMMHPIG-PAVL--------DQIEGK-L------GLEK-TKLRETRHVLSEYGNMASATVL 271 (320)
Q Consensus 209 i~~~l~~~g~~~~d~~~~~~i~h~~~-~~~~--------~~~~~~-l------g~~~-e~~~~~~~~~~~~Gn~~sasi~ 271 (320)
+-.+|+++|+++.||| .|=+|... ..++ +++++. + |.|+ +|+ .+|----..||-+.|+=
T Consensus 350 ipkll~kagltlkdid--~feiheafagqilanlkamdsdwfck~ymgr~~kvg~ppl~k~-nnwggslsighpfgatg- 425 (465)
T KOG1392|consen 350 IPKLLDKAGLTLKDID--VFEIHEAFAGQILANLKAMDSDWFCKEYMGRSGKVGRPPLDKL-NNWGGSLSIGHPFGATG- 425 (465)
T ss_pred cHHHHHHcCCcccccc--hhhhHHHHhHHHHhhhhhhcchHHHHHHhcccCccCCCChHHh-cccCcceecCCcccccc-
Confidence 4578899999999973 67777643 3343 334432 3 3332 232 22222223455544431
Q ss_pred HHHHHHHHhchhcCCCC--CCCCCceEEEEeeccchhhhheeeeeccC
Q 047978 272 FVLDEMRKRSVEEGKAT--TGEELEWGVLLGFEAGLTVEAIVLRSIPM 317 (320)
Q Consensus 272 ~~L~~~~~~~~~~g~l~--~G~~~d~vll~~~G~G~~~~a~~l~~~~~ 317 (320)
+-|+.+-. ++++ .| ++.++++..+|..--+++++..|+
T Consensus 426 vrl~mh~a-----nrl~~e~g---qygvvaacaaggqgvamlieaypk 465 (465)
T KOG1392|consen 426 VRLAMHSA-----NRLKEEKG---QYGVVAACAAGGQGVAMLIEAYPK 465 (465)
T ss_pred hhhHHHHH-----hHHHhhcC---ceeEeehhhcCCcceEEEeeccCC
Confidence 12322222 2232 34 888888888887777788877663
No 304
>PTZ00215 ribose 5-phosphate isomerase; Provisional
Probab=26.21 E-value=57 Score=26.67 Aligned_cols=30 Identities=27% Similarity=0.289 Sum_probs=22.1
Q ss_pred HHHHHHHHhchhcCCCCCCCCCceEEEEeeccchhhhhe
Q 047978 272 FVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEAI 310 (320)
Q Consensus 272 ~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~ 310 (320)
..++..+.+ +....| |++++.|.|++..|-
T Consensus 51 ~~va~~V~~----~~~~~G-----IliCGtGiG~siaAN 80 (151)
T PTZ00215 51 EKVCEEVLK----GEADTG-----ILVCGSGIGISIAAN 80 (151)
T ss_pred HHHHHHHhc----CCCcEE-----EEEcCCcHHHHHHHh
Confidence 455666666 666666 999999999998763
No 305
>TIGR01119 lacB galactose-6-phosphate isomerase, LacB subunit. This family contains four members from low GC gram-positive bacteria. Galactose-6-phosphate isomerase is involved in lactose catabolism by the tagatose-6-phosphate pathway.
Probab=26.14 E-value=57 Score=27.27 Aligned_cols=30 Identities=20% Similarity=0.185 Sum_probs=22.2
Q ss_pred HHHHHHHHHhchhcCCCCCCCCCceEEEEeeccchhhhh
Q 047978 271 LFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEA 309 (320)
Q Consensus 271 ~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a 309 (320)
-..++.++.+ |....| ||+++.|.|+++.|
T Consensus 46 a~~va~~V~~----g~~~~G-----IliCGTGiG~siaA 75 (171)
T TIGR01119 46 GKKVGEAVVS----GEADLG-----VCICGTGVGINNAV 75 (171)
T ss_pred HHHHHHHHHc----CCCCEE-----EEEcCCcHHHHHHH
Confidence 3455666666 666666 99999999999876
No 306
>PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B ....
Probab=25.91 E-value=93 Score=27.76 Aligned_cols=50 Identities=12% Similarity=0.196 Sum_probs=32.0
Q ss_pred chhHHHHHHHHhhhcCCCCCCCCceEE-EEcC--CChhHHHHHHHHcCCCcch
Q 047978 202 ADNIDKFLAESFDQVSLNDHDWNSLFW-MMHP--IGPAVLDQIEGKLGLEKTK 251 (320)
Q Consensus 202 ~~~~~~~i~~~l~~~g~~~~d~~~~~~-i~h~--~~~~~~~~~~~~lg~~~e~ 251 (320)
.+...++++++|+++++++++|+.+.+ ...+ ....+.....-..|+|.+.
T Consensus 27 ~~L~~~a~~~al~~~~i~~~~Id~v~~G~~~~~~~g~~~ar~~~l~aGl~~~v 79 (264)
T PF00108_consen 27 EDLAAEAVKAALERAGIDPEDIDAVIVGNVLQEGEGQNIARQAALAAGLPESV 79 (264)
T ss_dssp HHHHHHHHHHHHHHHTSHGGGEEEEEEE-SSSCTTTCHHHHHHHHHTTS-TTS
T ss_pred HHHHHHHHHHHHHhcccchhhhhhcCcccccccccchhhhhhhhhhccccccc
Confidence 456678899999999999998753222 1122 2334556666778998653
No 307
>TIGR02350 prok_dnaK chaperone protein DnaK. Members of this family are the chaperone DnaK, of the DnaK-DnaJ-GrpE chaperone system. All members of the seed alignment were taken from completely sequenced bacterial or archaeal genomes and (except for Mycoplasma sequence) found clustered with other genes of this systems. This model excludes DnaK homologs that are not DnaK itself, such as the heat shock cognate protein HscA (TIGR01991). However, it is not designed to distinguish among DnaK paralogs in eukaryotes. Note that a number of dnaK genes have shadow ORFs in the same reverse (relative to dnaK) reading frame, a few of which have been assigned glutamate dehydrogenase activity. The significance of this observation is unclear; lengths of such shadow ORFs are highly variable as if the presumptive protein product is not conserved.
Probab=25.43 E-value=96 Score=31.26 Aligned_cols=45 Identities=27% Similarity=0.353 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCC
Q 047978 59 LGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGL 104 (320)
Q Consensus 59 la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl 104 (320)
=..+..+++|+++++.+++||.|+++..+. .+|..-..|.+.+|.
T Consensus 306 ~~~~~i~~~l~~a~~~~~~i~~V~LvGGss-riP~v~~~i~~~f~~ 350 (595)
T TIGR02350 306 RTKEPVRQALKDAGLSASDIDEVILVGGST-RIPAVQELVKDFFGK 350 (595)
T ss_pred HHHHHHHHHHHHcCCCHhHCcEEEEECCcc-cChHHHHHHHHHhCC
Confidence 356778999999999999999999876555 388888888888884
No 308
>TIGR02133 RPI_actino ribose 5-phosphate isomerase. This family is a member of the RpiB/LacA/LacB subfamily (TIGR00689) but lies outside the RpiB equivalog (TIGR01120) which is also a member of that subfamily. Ribose 5-phosphate isomerase is an essential enzyme of the pentose phosphate pathway; a pathway that appears to be present in the actinobacteria. The only candidates for ribose 5-phosphate isomerase in the Actinobacteria are members of this family.
Probab=24.49 E-value=58 Score=26.49 Aligned_cols=30 Identities=27% Similarity=0.231 Sum_probs=21.8
Q ss_pred HHHHHHHHHhchhcCCCCCCCCCceEEEEeeccchhhhh
Q 047978 271 LFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEA 309 (320)
Q Consensus 271 ~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a 309 (320)
-..++..+.+ |....| ||+++.|.|+++.+
T Consensus 47 a~~va~~V~~----~~~~~G-----IliCGtGiG~siaA 76 (148)
T TIGR02133 47 CIAAAEAVAR----DAADLG-----IVIGGSGNGEAIAA 76 (148)
T ss_pred HHHHHHHHhc----CCCceE-----EEEcCCChhheeee
Confidence 3455555655 666666 99999999998765
No 309
>PTZ00400 DnaK-type molecular chaperone; Provisional
Probab=24.24 E-value=95 Score=31.88 Aligned_cols=45 Identities=22% Similarity=0.305 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCC
Q 047978 60 GKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLK 105 (320)
Q Consensus 60 a~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~ 105 (320)
.....+++|+++++.+++||.|+.+.-+. ..|..-..|.+.+|..
T Consensus 350 ~~~~i~~~L~~a~~~~~~i~~ViLvGGss-riP~v~~~l~~~f~~~ 394 (663)
T PTZ00400 350 TIEPCEKCIKDAGVKKDELNDVILVGGMT-RMPKVSETVKKIFGKE 394 (663)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEEECCcc-CChHHHHHHHHHhCCC
Confidence 45677899999999999999999876554 4788888898888754
No 310
>PRK00290 dnaK molecular chaperone DnaK; Provisional
Probab=24.10 E-value=1.3e+02 Score=30.60 Aligned_cols=46 Identities=24% Similarity=0.340 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCC
Q 047978 59 LGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLK 105 (320)
Q Consensus 59 la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~ 105 (320)
-..+.++++|+++++.+.+||.|+.+.-+. .+|..-..|.+.+|..
T Consensus 308 ~~~~~i~~~l~~a~~~~~~id~ViLvGGss-riP~v~~~l~~~fg~~ 353 (627)
T PRK00290 308 RTIEPCKQALKDAGLSVSDIDEVILVGGST-RMPAVQELVKEFFGKE 353 (627)
T ss_pred HHHHHHHHHHHHcCCChhhCcEEEEECCcC-CChHHHHHHHHHhCCC
Confidence 356678999999999999999998876555 3888888888888754
No 311
>PRK07027 cobalamin biosynthesis protein CbiG; Provisional
Probab=23.20 E-value=1.3e+02 Score=23.67 Aligned_cols=49 Identities=16% Similarity=0.110 Sum_probs=35.2
Q ss_pred chhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHHHHHHcCCCcc
Q 047978 202 ADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKT 250 (320)
Q Consensus 202 ~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e 250 (320)
.+.+.+.++++|+.+++.++.++.+.-+-.-.+..-+..+++.+|+|..
T Consensus 16 ~e~i~~ai~~~L~~~~l~~~si~~lasi~~K~~E~~L~~~A~~lg~pl~ 64 (126)
T PRK07027 16 AEQIEAAIRAALAQRPLASADVRVVATLDLKADEAGLLALCARHGWPLR 64 (126)
T ss_pred HHHHHHHHHHHHHHcCCCHHHhheeEehhhhcCCHHHHHHHHHhCCCeE
Confidence 4567888999999999999876322223333455778888999998744
No 312
>PTZ00009 heat shock 70 kDa protein; Provisional
Probab=22.58 E-value=1.2e+02 Score=30.97 Aligned_cols=44 Identities=14% Similarity=0.209 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCC
Q 047978 60 GKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGL 104 (320)
Q Consensus 60 a~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl 104 (320)
..+..+++|+++++++++||.|+++.-+. .+|..-..|.+.+|-
T Consensus 315 ~~~~i~~~L~~a~~~~~~i~~ViLvGGss-riP~v~~~i~~~f~~ 358 (653)
T PTZ00009 315 TLQPVEKVLKDAGMDKRSVHEVVLVGGST-RIPKVQSLIKDFFNG 358 (653)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEEECCCC-CChhHHHHHHHHhCC
Confidence 45668899999999999999998776544 378888888888863
No 313
>COG0054 RibH Riboflavin synthase beta-chain [Coenzyme metabolism]
Probab=22.57 E-value=1.1e+02 Score=24.92 Aligned_cols=45 Identities=22% Similarity=0.342 Sum_probs=31.8
Q ss_pred cccchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCC-CCCCCHHHHHH
Q 047978 52 LVPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSG-VDMPGADYQLT 99 (320)
Q Consensus 52 ~~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~-~~~p~~a~~l~ 99 (320)
++....|...+.|+++|++.|.+.++||.+ ...+ |-.|-.+..|+
T Consensus 22 fn~~I~d~ll~gA~~~l~~~G~~~~~i~vv---~VPGa~EiPl~a~~La 67 (152)
T COG0054 22 FNDDITDALLEGAVDALKRHGADVDNIDVV---RVPGAFEIPLAAKKLA 67 (152)
T ss_pred hhHHHHHHHHHHHHHHHHHcCCCcccceEE---EeCCcchhHHHHHHHH
Confidence 466778889999999999999888877744 4444 66774333333
No 314
>TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade. Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes.
Probab=21.91 E-value=3.4e+02 Score=26.49 Aligned_cols=82 Identities=7% Similarity=0.060 Sum_probs=43.6
Q ss_pred hhHHHHHHHHhhhcCCCCCCCCceEEEEcCC-----Chh---HHHHHHHHcCCCcchhhhhHHHHhccCCcccchHHHHH
Q 047978 203 DNIDKFLAESFDQVSLNDHDWNSLFWMMHPI-----GPA---VLDQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVL 274 (320)
Q Consensus 203 ~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~-----~~~---~~~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L 274 (320)
..-.++.+.+|+++++++++|+ .+++-.- ++. .+..+.+.+|.+.-.. +.--..|.+...-+.+
T Consensus 52 tma~~AA~~lL~~a~id~~~Id--~Liv~TeS~~d~sps~a~~v~~lL~~lG~~~~~~------fDi~~AC~G~t~AL~~ 123 (454)
T TIGR01833 52 SLCLTVVSKLMERYNIDYNQIG--RLEVGTETIIDKSKSVKTVLMQLFEESGNTDVEG------IDTTNACYGGTAALFN 123 (454)
T ss_pred HHHHHHHHHHHHHcCCCHHHCC--EEEEECCCCCCCCCchHHHHHHHHHhcCCCCceE------EeccccchhHHHHHHH
Confidence 3345778899999999998874 3333221 222 2334444566543222 2223455555444444
Q ss_pred H-HHHHhchhcCCCCCCCCCceEEEEe
Q 047978 275 D-EMRKRSVEEGKATTGEELEWGVLLG 300 (320)
Q Consensus 275 ~-~~~~~~~~~g~l~~G~~~d~vll~~ 300 (320)
+ .+++. + ..++ +++|+++
T Consensus 124 A~~~i~s----~-~~~~---~~aLVV~ 142 (454)
T TIGR01833 124 AINWIES----S-SWDG---RYALVVA 142 (454)
T ss_pred HHHHHHc----C-CcCC---CeEEEEE
Confidence 4 33444 3 2355 7777776
No 315
>PF01890 CbiG_C: Cobalamin synthesis G C-terminus; InterPro: IPR002750 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. CbiG proteins are specific for anaerobic cobalamin biosynthesis. CbiG, which shows homology with CobE of the aerobic pathway, participates in the conversion of cobalt-precorrin 5 into cobalt-precorrin 6 []. CbiG is responsible for the opening of the delta-lactone ring and extrusion of the C2-unit []. The aerobic pathway uses molecular oxygen to trigger the events at C-20 leading to contraction and expulsion of the C2-unit as acetic acid from a metal-free intermediate, whereas the anaerobic route involves the internal delivery of oxygen from a carboxylic acid terminus to C-20 followed by extrusion of the C2-unit as acetaldehyde, using cobalt complexes as substrates []. This entry represents the core domain of CibG.; GO: 0009236 cobalamin biosynthetic process; PDB: 3BY5_A 2W6K_A 2W6L_A 3EEQ_B.
Probab=21.88 E-value=85 Score=24.44 Aligned_cols=49 Identities=12% Similarity=0.210 Sum_probs=32.1
Q ss_pred chhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHHHHHHcCCCcc
Q 047978 202 ADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKT 250 (320)
Q Consensus 202 ~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e 250 (320)
.+.+.+.++++|++.++++.+++.+.-+-.-.+...+..+++.+++|..
T Consensus 14 ~~~i~~ai~~~l~~~~~~~~~i~~iasi~~K~~E~~l~~~A~~l~~~~~ 62 (121)
T PF01890_consen 14 AEEIEEAIEQALAEAGLSPRSIAAIASIDIKADEPGLLELAEELGIPLR 62 (121)
T ss_dssp HHHHHHHHHHHHHHCT--GGGEEEEEESSSSS--HHHHHHHHHCTSEEE
T ss_pred HHHHHHHHHHHHHHcCCChhhccEEEeccccCCCHHHHHHHHHhCCCeE
Confidence 4677889999999999998875311223333556788899999997643
No 316
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.
Probab=21.14 E-value=81 Score=29.79 Aligned_cols=47 Identities=9% Similarity=-0.078 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEEeeCC-CCCCCHHHHHHHHcCCC
Q 047978 58 KLGKEAVSKAIKEWGQPISKITHLISCSVSG-VDMPGADYQLTKLLGLK 105 (320)
Q Consensus 58 ~la~~Aa~~aL~~ag~~~~dId~li~~s~t~-~~~p~~a~~l~~~LGl~ 105 (320)
+...++.++.|+++|+.++|||.+++..... ....+ -..+.+.++++
T Consensus 205 ~~~~~~~~~~l~~~g~~~~did~~i~H~p~~~~~~k~-~~~~l~~~~~~ 252 (379)
T TIGR01835 205 NAFENAWNDYAKRTGLSLADFAAFCFHVPFTKMGLKA-LRHILKKNYED 252 (379)
T ss_pred HHHHHHHHHHHHHhCCCHHHcCEEEECCCCCcHHHHH-HHHHHhhcccc
Confidence 3457888999999999999999988765322 11111 12344556655
No 317
>PLN02577 hydroxymethylglutaryl-CoA synthase
Probab=20.59 E-value=3.6e+02 Score=26.41 Aligned_cols=80 Identities=6% Similarity=0.050 Sum_probs=43.2
Q ss_pred HHHHHHHHhhhcCCCCCCCCceEEEEcC-----CChhHH---HHHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHH-
Q 047978 205 IDKFLAESFDQVSLNDHDWNSLFWMMHP-----IGPAVL---DQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLD- 275 (320)
Q Consensus 205 ~~~~i~~~l~~~g~~~~d~~~~~~i~h~-----~~~~~~---~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~- 275 (320)
-.++.+.+|+++|+++++|+ .+++-. ..+.+- ..+.+.||.+.-..+. --..|.+...-+.++
T Consensus 57 A~~AA~~aL~~agid~~~Id--llivaTeT~~d~~ps~A~~v~~ll~~LG~~~~~afD------i~~AC~G~~~AL~~A~ 128 (459)
T PLN02577 57 SLTVVKSLLEKYNIDPKQIG--RLEVGSETVIDKSKSIKTFLMQLFEESGNTDIEGVD------STNACYGGTAALLNCV 128 (459)
T ss_pred HHHHHHHHHHHcCCCHHHCC--EEEEEcCCCCCCCCchHHHHHHHHHHhCCCCcEEee------hhhhhHHHHHHHHHHH
Confidence 34677889999999999874 343322 223333 3445777865433222 123444444444333
Q ss_pred HHHHhchhcCCCCCCCCCceEEEEe
Q 047978 276 EMRKRSVEEGKATTGEELEWGVLLG 300 (320)
Q Consensus 276 ~~~~~~~~~g~l~~G~~~d~vll~~ 300 (320)
.+++. |. .++ +++|+++
T Consensus 129 ~~i~s----g~-~~~---~~aLVV~ 145 (459)
T PLN02577 129 NWVES----SS-WDG---RYGLVVA 145 (459)
T ss_pred HHHHc----CC-CCC---CeEEEEE
Confidence 33443 32 245 7788876
No 318
>PTZ00450 macrophage migration inhibitory factor-like protein; Provisional
Probab=20.47 E-value=33 Score=26.51 Aligned_cols=26 Identities=0% Similarity=0.139 Sum_probs=13.8
Q ss_pred hHHHHHHHHhh-hcCCCCCCCCceEEEEcC
Q 047978 204 NIDKFLAESFD-QVSLNDHDWNSLFWMMHP 232 (320)
Q Consensus 204 ~~~~~i~~~l~-~~g~~~~d~~~~~~i~h~ 232 (320)
.+...+-++++ +.|+.++. +++-++.
T Consensus 76 ~~s~~i~~~l~~~LgIp~dR---iYI~f~d 102 (113)
T PTZ00450 76 MMTPRITAAITKECGIPAER---IYVFYYS 102 (113)
T ss_pred HHHHHHHHHHHHHcCCCccc---EEEEEEc
Confidence 34444444443 45777654 4666664
Done!