Query 047978
Match_columns 320
No_of_seqs 131 out of 1567
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 08:25:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047978.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047978hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4ewp_A 3-oxoacyl-[acyl-carrier 100.0 1.3E-55 4.6E-60 411.1 18.0 286 7-315 14-350 (350)
2 3ov2_A Curcumin synthase; type 100.0 3.6E-54 1.2E-58 406.5 23.0 309 4-317 14-389 (393)
3 3oit_A OS07G0271500 protein; t 100.0 1.7E-52 5.7E-57 394.4 21.5 304 4-317 8-384 (387)
4 3il3_A 3-oxoacyl-[acyl-carrier 100.0 3E-51 1E-55 377.4 18.8 285 6-314 9-323 (323)
5 3gwa_A 3-oxoacyl-(acyl-carrier 100.0 3.9E-51 1.3E-55 382.6 18.4 288 4-314 28-365 (365)
6 4efi_A 3-oxoacyl-(acyl-carrier 100.0 2.2E-51 7.6E-56 382.9 15.7 292 4-318 14-347 (354)
7 1i88_A CHS2, chalcone synthase 100.0 1.9E-49 6.6E-54 374.4 21.5 303 5-316 15-388 (389)
8 3a5r_A Benzalacetone synthase; 100.0 3.8E-49 1.3E-53 372.1 22.0 310 6-319 12-387 (387)
9 2p0u_A Stilbenecarboxylate syn 100.0 6.4E-49 2.2E-53 373.2 22.4 305 5-318 33-408 (413)
10 3awk_A Chalcone synthase-like 100.0 7.1E-49 2.4E-53 371.8 22.6 303 5-316 28-401 (402)
11 1ee0_A 2-pyrone synthase; poly 100.0 2.7E-49 9.1E-54 374.8 19.4 310 6-319 21-396 (402)
12 3il6_A 3-oxoacyl-[acyl-carrier 100.0 4.2E-49 1.4E-53 363.0 18.6 283 4-314 2-321 (321)
13 4dfe_A 3-oxoacyl-[acyl-carrier 100.0 4E-49 1.4E-53 365.0 18.5 287 6-314 11-333 (333)
14 1xes_A Dihydropinosylvin synth 100.0 6.7E-49 2.3E-53 373.0 20.0 309 5-317 37-412 (413)
15 3h78_A PQS biosynthetic enzyme 100.0 4.6E-49 1.6E-53 367.6 16.8 290 4-317 23-354 (359)
16 3euo_A Type III pentaketide sy 100.0 1.5E-48 5E-53 366.7 18.7 300 6-315 2-379 (379)
17 3s21_A 3-oxoacyl-[ACP] synthas 100.0 1.4E-48 4.9E-53 362.9 16.5 293 4-314 10-345 (345)
18 2d3m_A Pentaketide chromone sy 100.0 7.1E-48 2.4E-52 365.6 21.2 304 5-316 28-404 (406)
19 3led_A 3-oxoacyl-acyl carrier 100.0 1.5E-48 5.3E-53 367.6 15.4 287 4-315 22-392 (392)
20 3e1h_A PKSIIINC, putative unch 100.0 2.2E-47 7.4E-52 365.5 20.3 303 6-316 31-409 (465)
21 3v7i_A Putative polyketide syn 100.0 3.7E-46 1.3E-50 352.5 22.9 276 16-315 100-413 (413)
22 2h84_A Steely1; thiolase-fold, 100.0 3.2E-45 1.1E-49 344.0 21.4 294 5-315 12-373 (374)
23 3s3l_A CERJ; acyltransferase, 100.0 3.8E-46 1.3E-50 347.7 13.7 289 4-316 3-340 (357)
24 1ted_A PKS18; thiolase fold, s 100.0 5.6E-45 1.9E-49 344.4 18.7 298 6-316 32-392 (393)
25 1u0m_A Putative polyketide syn 100.0 1.2E-44 4E-49 341.0 17.8 291 7-315 10-355 (382)
26 2v4w_A Hydroxymethylglutaryl-C 100.0 9.3E-45 3.2E-49 344.9 14.2 284 5-317 4-380 (460)
27 3tsy_A Fusion protein 4-coumar 100.0 2.5E-43 8.5E-48 367.9 23.4 312 5-320 602-979 (979)
28 1mzj_A Beta-ketoacylsynthase I 100.0 1.9E-43 6.5E-48 327.7 16.7 288 5-316 10-333 (339)
29 2x3e_A 3-oxoacyl-[acyl-carrier 100.0 4.4E-43 1.5E-47 324.2 17.6 288 6-319 5-328 (331)
30 3v4n_A HMG-COA synthase; hydro 100.0 3E-44 1E-48 337.8 9.5 278 6-317 7-327 (388)
31 1hnj_A Beta-ketoacyl-acyl carr 100.0 1E-42 3.5E-47 319.8 16.8 285 6-314 2-317 (317)
32 3sqz_A Putative hydroxymethylg 100.0 5.7E-44 2E-48 338.5 7.6 278 6-317 36-357 (425)
33 1u6e_A 3-oxoacyl-[acyl-carrier 100.0 5.7E-42 2E-46 317.0 16.1 288 4-315 10-333 (335)
34 1zow_A 3-oxoacyl-[acyl-carrier 100.0 2.2E-41 7.4E-46 310.3 18.6 282 6-315 2-312 (313)
35 2f82_A HMG-COA synthase; HMGS1 100.0 8.4E-42 2.9E-46 327.4 14.2 283 6-317 3-372 (450)
36 2p8u_A Hydroxymethylglutaryl-C 100.0 3.5E-41 1.2E-45 324.5 16.7 286 6-317 24-399 (478)
37 1xpm_A 3-hydroxy-3-methylgluta 100.0 9.8E-42 3.4E-46 322.2 12.3 278 6-317 2-321 (396)
38 1ub7_A 3-oxoacyl-[acyl-carrier 100.0 4.8E-41 1.7E-45 309.3 16.1 285 7-316 2-321 (322)
39 2wya_A Hydroxymethylglutaryl-C 100.0 1.3E-41 4.6E-46 326.9 11.6 291 2-316 1-379 (460)
40 2ebd_A 3-oxoacyl-[acyl-carrier 100.0 2.4E-40 8.3E-45 302.7 17.3 279 6-314 2-309 (309)
41 3lma_A Stage V sporulation pro 99.9 2.6E-24 9E-29 195.6 15.6 236 53-307 52-313 (347)
42 4e1l_A Acetoacetyl-COA thiolas 99.7 3.4E-17 1.2E-21 154.3 17.2 242 50-313 23-394 (395)
43 3ss6_A Acetyl-COA acetyltransf 99.7 3.9E-17 1.3E-21 153.8 15.1 243 49-314 22-393 (394)
44 4dd5_A Acetyl-COA acetyltransf 99.7 1.5E-16 5E-21 150.0 15.6 243 48-313 23-395 (396)
45 2gqd_A 3-oxoacyl-[acyl-carrier 99.7 1.1E-15 3.8E-20 145.7 17.5 297 1-315 24-435 (437)
46 3svk_A Acetyl-COA acetyltransf 99.7 9.6E-16 3.3E-20 144.8 15.4 241 52-314 28-406 (407)
47 2iik_A 3-ketoacyl-COA thiolase 99.6 5.2E-16 1.8E-20 147.1 11.9 275 16-314 10-415 (418)
48 1tqy_A Beta-ketoacyl synthase/ 99.6 9.3E-16 3.2E-20 145.8 13.6 296 5-316 3-418 (424)
49 3o04_A LMO2201 protein, beta-k 99.6 9.9E-15 3.4E-19 138.2 18.7 296 4-315 3-411 (413)
50 3goa_A 3-ketoacyl-COA thiolase 99.6 2.7E-14 9.2E-19 134.1 16.9 214 52-280 23-359 (387)
51 1e5m_A KAS II, beta ketoacyl a 99.6 2.6E-14 8.9E-19 135.4 16.7 294 5-314 7-414 (416)
52 3ho9_A 3-oxoacyl-[acyl-carrier 99.6 1.1E-14 3.7E-19 138.5 13.8 292 4-314 17-426 (427)
53 1ox0_A Beta ketoacyl-acyl carr 99.6 3.9E-14 1.3E-18 134.8 17.0 298 1-316 19-428 (430)
54 1j3n_A 3-oxoacyl-(acyl-carrier 99.6 2.3E-14 7.8E-19 135.5 14.9 290 5-314 2-407 (408)
55 3kzu_A 3-oxoacyl-(acyl-carrier 99.6 2.7E-14 9.3E-19 135.8 15.4 249 55-315 86-426 (428)
56 2vu1_A Acetyl-COA acetyltransf 99.6 7.3E-14 2.5E-18 131.3 16.3 239 53-314 24-391 (392)
57 1wl4_A Acetyl-coenzyme A acety 99.5 1.2E-13 4.1E-18 130.1 17.3 239 53-314 27-396 (397)
58 4ddo_A 3-oxoacyl-[acyl-carrier 99.5 1.4E-13 4.7E-18 131.8 17.2 298 3-317 22-444 (451)
59 1ulq_A Putative acetyl-COA ace 99.5 2.8E-13 9.4E-18 127.8 18.1 242 51-314 21-399 (401)
60 2ib8_A Acetyl-COA acetyltransf 99.5 4E-13 1.4E-17 126.4 16.8 237 52-314 28-394 (395)
61 2iwz_A 3-oxoacyl-[acyl-carrier 99.5 2.7E-13 9.1E-18 129.3 14.7 248 55-314 96-437 (438)
62 4ewg_A Beta-ketoacyl synthase; 99.5 6.2E-13 2.1E-17 125.8 16.7 291 4-314 5-410 (412)
63 1wdk_C 3-ketoacyl-COA thiolase 99.5 4.7E-13 1.6E-17 125.7 14.2 240 53-314 27-389 (390)
64 1afw_A 3-ketoacetyl-COA thiola 99.4 1.5E-12 5E-17 122.5 15.3 215 50-280 29-367 (393)
65 1tqy_B Actinorhodin polyketide 99.4 2.2E-12 7.5E-17 122.1 16.2 293 5-316 9-412 (415)
66 2ix4_A 3-oxoacyl-[acyl-carrier 99.4 1.3E-12 4.4E-17 124.3 13.8 247 56-314 88-430 (431)
67 2gp6_A 3-oxoacyl-[acyl-carrier 99.4 1.6E-11 5.4E-16 116.9 20.3 291 5-314 28-433 (434)
68 2wu9_A 3-ketoacyl-COA thiolase 99.4 2E-12 6.8E-17 123.2 13.9 242 52-315 51-419 (442)
69 3mqd_A Beta-ketoacyl synthase; 99.4 7.9E-12 2.7E-16 118.8 15.9 295 4-315 22-426 (428)
70 2vba_A 3-oxoacyl-[acyl-carrier 99.4 1.6E-11 5.5E-16 115.9 16.4 292 5-315 2-404 (406)
71 2wge_A 3-oxoacyl-[acyl-carrier 99.3 3.7E-11 1.3E-15 113.7 17.5 290 4-314 11-415 (416)
72 2qo3_A Eryaii erythromycin pol 99.2 2E-10 7E-15 118.3 17.5 249 55-316 94-432 (915)
73 2hg4_A DEBS, 6-deoxyerythronol 99.2 3.5E-10 1.2E-14 116.6 15.0 248 56-316 116-454 (917)
74 3hhd_A Fatty acid synthase; tr 99.0 1.8E-08 6.2E-13 104.3 17.9 293 4-316 3-410 (965)
75 4egv_A Acetyl-COA acetyltransf 98.8 9.6E-09 3.3E-13 99.6 10.2 244 52-312 38-418 (520)
76 3zen_D Fatty acid synthase; tr 98.5 6.8E-07 2.3E-11 101.1 14.0 253 55-316 2646-3012(3089)
77 2vz8_A Fatty acid synthase; tr 97.5 0.0039 1.3E-07 70.7 19.0 244 57-316 79-408 (2512)
78 2uv9_A Fatty acid synthase alp 96.5 0.019 6.5E-07 62.6 12.9 110 56-165 1186-1366(1878)
79 2uv8_A Fatty acid synthase sub 96.0 0.022 7.7E-07 62.2 10.2 105 207-316 1520-1659(1887)
80 2pff_A Fatty acid synthase sub 95.5 0.0044 1.5E-07 66.0 2.2 108 57-165 1013-1192(1688)
81 3lma_A Stage V sporulation pro 92.4 0.13 4.6E-06 46.5 4.9 71 60-131 209-310 (347)
82 3s3l_A CERJ; acyltransferase, 82.5 1.2 4.3E-05 40.3 4.7 48 55-107 235-283 (357)
83 3ss6_A Acetyl-COA acetyltransf 79.0 2.1 7.2E-05 39.3 5.0 44 60-107 294-337 (394)
84 3il3_A 3-oxoacyl-[acyl-carrier 78.8 2.3 7.8E-05 37.9 5.0 46 58-107 224-269 (323)
85 3h78_A PQS biosynthetic enzyme 78.3 1.9 6.4E-05 39.2 4.3 47 57-107 253-299 (359)
86 4efi_A 3-oxoacyl-(acyl-carrier 78.3 1.9 6.6E-05 39.0 4.4 47 57-107 243-289 (354)
87 4dfe_A 3-oxoacyl-[acyl-carrier 78.2 2 6.9E-05 38.4 4.5 46 58-107 234-279 (333)
88 1u6e_A 3-oxoacyl-[acyl-carrier 78.1 1.8 6.2E-05 38.5 4.2 47 57-107 231-277 (335)
89 3v7i_A Putative polyketide syn 77.8 4.9 0.00017 37.3 7.0 85 202-301 138-226 (413)
90 3s21_A 3-oxoacyl-[ACP] synthas 77.7 1.9 6.6E-05 38.7 4.2 47 57-107 245-291 (345)
91 2x3e_A 3-oxoacyl-[acyl-carrier 77.6 2 6.8E-05 38.3 4.3 46 58-107 224-269 (331)
92 1wl4_A Acetyl-coenzyme A acety 76.9 2.9 9.8E-05 38.4 5.2 44 60-107 297-340 (397)
93 2vu1_A Acetyl-COA acetyltransf 76.7 2.7 9.4E-05 38.5 5.0 44 60-107 292-335 (392)
94 3gwa_A 3-oxoacyl-(acyl-carrier 76.4 2.2 7.5E-05 38.8 4.3 47 57-107 265-311 (365)
95 2ebd_A 3-oxoacyl-[acyl-carrier 74.8 2.7 9.4E-05 36.8 4.3 46 58-107 210-255 (309)
96 1zow_A 3-oxoacyl-[acyl-carrier 74.4 2.8 9.7E-05 36.8 4.3 46 58-107 212-257 (313)
97 1hnj_A Beta-ketoacyl-acyl carr 74.0 3.2 0.00011 36.6 4.5 45 59-107 219-263 (317)
98 1mzj_A Beta-ketoacylsynthase I 73.2 2.7 9.3E-05 37.5 3.9 46 58-107 231-276 (339)
99 1ted_A PKS18; thiolase fold, s 72.6 2.8 9.4E-05 38.4 3.9 46 58-107 287-332 (393)
100 1ub7_A 3-oxoacyl-[acyl-carrier 71.2 3.1 0.00011 36.7 3.8 46 58-107 220-265 (322)
101 4ewp_A 3-oxoacyl-[acyl-carrier 70.5 7.8 0.00027 34.6 6.4 82 203-301 64-150 (350)
102 3euo_A Type III pentaketide sy 68.3 11 0.00039 34.2 7.0 68 203-278 83-154 (379)
103 1u0m_A Putative polyketide syn 66.4 3.9 0.00013 37.3 3.5 41 63-107 257-297 (382)
104 3il6_A 3-oxoacyl-[acyl-carrier 66.2 15 0.0005 32.5 7.2 83 202-301 53-140 (321)
105 3svk_A Acetyl-COA acetyltransf 65.7 3.7 0.00013 37.9 3.2 44 60-107 307-350 (407)
106 4e1l_A Acetoacetyl-COA thiolas 65.1 17 0.00059 33.0 7.7 85 202-301 30-118 (395)
107 4egv_A Acetyl-COA acetyltransf 64.2 4.5 0.00015 38.7 3.5 44 59-106 318-361 (520)
108 2h84_A Steely1; thiolase-fold, 63.9 19 0.00066 32.3 7.7 84 203-301 97-184 (374)
109 4dd5_A Acetyl-COA acetyltransf 63.2 17 0.00059 33.1 7.2 84 202-301 32-120 (396)
110 3e1h_A PKSIIINC, putative unch 62.7 16 0.00055 34.3 7.0 68 203-278 112-183 (465)
111 3awk_A Chalcone synthase-like 62.5 18 0.00061 33.1 7.2 85 203-302 117-205 (402)
112 3ho9_A 3-oxoacyl-[acyl-carrier 61.4 1.9 6.6E-05 40.1 0.4 48 58-105 292-340 (427)
113 3goa_A 3-ketoacyl-COA thiolase 61.0 24 0.00082 32.0 7.8 85 202-301 28-118 (387)
114 3qbx_A Anhydro-N-acetylmuramic 61.0 5.8 0.0002 36.1 3.4 54 53-106 63-124 (371)
115 2ib8_A Acetyl-COA acetyltransf 58.9 5.1 0.00017 36.7 2.8 44 60-107 297-340 (395)
116 3oit_A OS07G0271500 protein; t 57.8 18 0.00062 32.9 6.3 83 203-301 98-185 (387)
117 3tsy_A Fusion protein 4-coumar 57.7 7.1 0.00024 40.2 3.9 46 58-107 864-909 (979)
118 3ov2_A Curcumin synthase; type 57.4 20 0.00068 32.7 6.5 80 203-301 104-191 (393)
119 1i88_A CHS2, chalcone synthase 56.8 23 0.0008 32.1 6.9 47 203-250 104-153 (389)
120 1ulq_A Putative acetyl-COA ace 55.7 5.4 0.00019 36.6 2.4 41 60-104 298-338 (401)
121 3kzu_A 3-oxoacyl-(acyl-carrier 55.6 4.4 0.00015 37.6 1.8 47 59-106 294-341 (428)
122 1afw_A 3-ketoacetyl-COA thiola 55.3 5.3 0.00018 36.6 2.2 43 60-106 295-337 (393)
123 3ven_A O-carbamoyltransferase 53.6 6 0.00021 38.3 2.4 27 60-86 52-78 (576)
124 2p0u_A Stilbenecarboxylate syn 53.3 22 0.00074 32.7 6.1 46 203-250 122-171 (413)
125 1wdk_C 3-ketoacyl-COA thiolase 52.8 6.2 0.00021 36.0 2.3 42 60-105 287-328 (390)
126 1j3n_A 3-oxoacyl-(acyl-carrier 52.7 3.1 0.00011 38.3 0.2 46 58-104 275-322 (408)
127 1ee0_A 2-pyrone synthase; poly 52.6 20 0.00067 32.8 5.7 46 203-250 109-158 (402)
128 3o04_A LMO2201 protein, beta-k 52.4 7.3 0.00025 35.8 2.7 47 58-104 277-324 (413)
129 4ddo_A 3-oxoacyl-[acyl-carrier 51.7 7.6 0.00026 36.3 2.7 46 59-104 309-355 (451)
130 2ivn_A O-sialoglycoprotein end 51.4 16 0.00053 32.6 4.6 28 58-85 49-76 (330)
131 2wu9_A 3-ketoacyl-COA thiolase 51.0 7.7 0.00026 36.2 2.6 43 60-106 317-359 (442)
132 1tqy_B Actinorhodin polyketide 49.7 8.6 0.00029 35.4 2.7 46 59-104 280-326 (415)
133 4ewg_A Beta-ketoacyl synthase; 49.1 7.4 0.00025 35.8 2.2 48 57-104 278-326 (412)
134 1e5m_A KAS II, beta ketoacyl a 49.0 8.9 0.0003 35.3 2.7 46 58-104 281-328 (416)
135 2gqd_A 3-oxoacyl-[acyl-carrier 48.7 9 0.00031 35.6 2.7 46 58-104 301-348 (437)
136 2gel_A Putative GRAM negative 48.5 14 0.00049 31.0 3.7 29 57-85 35-63 (231)
137 3a5r_A Benzalacetone synthase; 48.2 25 0.00084 31.9 5.6 47 203-250 100-149 (387)
138 2iik_A 3-ketoacyl-COA thiolase 48.0 6.5 0.00022 36.4 1.6 43 60-106 315-357 (418)
139 3led_A 3-oxoacyl-acyl carrier 47.7 13 0.00046 33.9 3.7 45 56-104 289-334 (392)
140 2iwz_A 3-oxoacyl-[acyl-carrier 47.2 9.8 0.00034 35.3 2.7 46 58-104 301-348 (438)
141 1tqy_A Beta-ketoacyl synthase/ 46.9 10 0.00034 35.0 2.7 46 58-104 283-330 (424)
142 2wge_A 3-oxoacyl-[acyl-carrier 46.7 10 0.00035 35.0 2.7 26 58-83 285-310 (416)
143 2ix4_A 3-oxoacyl-[acyl-carrier 46.3 10 0.00035 35.1 2.7 46 58-103 294-340 (431)
144 2gp6_A 3-oxoacyl-[acyl-carrier 46.1 11 0.00039 34.9 3.0 27 58-84 302-328 (434)
145 3r6m_A YEAZ, resuscitation pro 46.1 22 0.00075 29.6 4.4 48 58-105 37-89 (213)
146 1xes_A Dihydropinosylvin synth 45.8 30 0.001 31.7 5.8 46 203-250 127-176 (413)
147 1ox0_A Beta ketoacyl-acyl carr 45.6 9.3 0.00032 35.3 2.3 47 58-104 296-343 (430)
148 3cqy_A Anhydro-N-acetylmuramic 45.2 13 0.00046 33.7 3.1 53 54-106 68-130 (370)
149 3eno_A Putative O-sialoglycopr 44.2 17 0.00057 32.5 3.7 27 59-85 55-81 (334)
150 1xpm_A 3-hydroxy-3-methylgluta 44.2 15 0.00051 33.6 3.4 28 58-85 207-234 (396)
151 2d3m_A Pentaketide chromone sy 38.2 27 0.00091 31.9 4.1 45 58-107 290-338 (406)
152 2qo3_A Eryaii erythromycin pol 37.0 15 0.00051 37.7 2.4 49 57-105 285-334 (915)
153 3hhd_A Fatty acid synthase; tr 35.6 10 0.00035 39.2 0.8 48 57-104 268-316 (965)
154 2w6k_A COBE; biosynthetic prot 35.5 44 0.0015 25.9 4.4 48 56-106 23-71 (145)
155 2a6a_A Hypothetical protein TM 35.4 25 0.00085 29.3 3.1 29 57-85 46-74 (218)
156 3v4n_A HMG-COA synthase; hydro 34.1 27 0.00092 31.8 3.4 29 57-85 211-239 (388)
157 1xho_A Chorismate mutase; sout 33.4 55 0.0019 25.4 4.4 44 61-107 54-99 (148)
158 3sqz_A Putative hydroxymethylg 33.1 28 0.00096 32.2 3.4 29 57-85 240-268 (425)
159 3he8_A Ribose-5-phosphate isom 28.2 33 0.0011 26.8 2.5 31 270-309 45-75 (149)
160 2v4w_A Hydroxymethylglutaryl-C 28.2 24 0.00082 33.1 2.0 38 64-105 229-270 (460)
161 2dt5_A AT-rich DNA-binding pro 28.1 23 0.00078 29.4 1.6 59 239-303 32-90 (211)
162 2vt3_A REX, redox-sensing tran 27.7 21 0.00072 29.7 1.4 63 239-307 37-100 (215)
163 3ph3_A Ribose-5-phosphate isom 27.0 36 0.0012 27.2 2.5 30 271-309 66-95 (169)
164 3s5p_A Ribose 5-phosphate isom 26.9 37 0.0013 27.0 2.6 30 271-309 67-96 (166)
165 1o1x_A Ribose-5-phosphate isom 26.2 38 0.0013 26.6 2.5 30 271-309 58-87 (155)
166 1dkg_D Molecular chaperone DNA 25.7 51 0.0017 29.4 3.7 45 60-105 316-360 (383)
167 2vvr_A Ribose-5-phosphate isom 25.1 41 0.0014 26.3 2.5 30 271-309 47-76 (149)
168 3k7p_A Ribose 5-phosphate isom 24.9 41 0.0014 27.1 2.5 29 272-309 71-99 (179)
169 2w6k_A COBE; biosynthetic prot 24.8 1E+02 0.0035 23.8 4.8 49 202-250 24-72 (145)
170 3sgw_A Ribose 5-phosphate isom 24.6 41 0.0014 27.2 2.5 30 271-309 78-107 (184)
171 4gni_A Putative heat shock pro 24.6 54 0.0018 29.6 3.7 47 58-105 325-371 (409)
172 2f82_A HMG-COA synthase; HMGS1 24.4 94 0.0032 28.7 5.4 44 202-247 53-101 (450)
173 3nq4_A 6,7-dimethyl-8-ribityll 23.5 65 0.0022 25.3 3.4 47 52-101 22-70 (156)
174 2hg4_A DEBS, 6-deoxyerythronol 23.3 21 0.00072 36.6 0.7 47 57-104 307-355 (917)
175 2p8u_A Hydroxymethylglutaryl-C 22.9 1.4E+02 0.0048 27.8 6.3 43 202-246 74-121 (478)
176 3zyy_X Iron-sulfur cluster bin 22.8 32 0.0011 33.6 1.8 42 62-107 519-561 (631)
177 2vvp_A Ribose-5-phosphate isom 22.7 47 0.0016 26.3 2.5 30 271-309 50-79 (162)
178 1xho_A Chorismate mutase; sout 22.4 54 0.0019 25.4 2.6 46 201-248 49-97 (148)
179 3d2f_A Heat shock protein homo 22.1 45 0.0016 32.8 2.8 46 60-106 317-362 (675)
180 3keo_A Redox-sensing transcrip 21.4 37 0.0013 28.2 1.7 56 239-303 36-94 (212)
181 3s0r_A De novo designed helica 21.1 75 0.0026 16.8 2.2 14 56-69 16-29 (30)
182 2ppw_A Conserved domain protei 20.4 55 0.0019 27.2 2.5 30 271-309 56-85 (216)
No 1
>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665}
Probab=100.00 E-value=1.3e-55 Score=411.10 Aligned_cols=286 Identities=20% Similarity=0.242 Sum_probs=241.4
Q ss_pred eEEccccccCCCcccccccHHHHHhhhcCCchh---HHHHHHHHHhhhcccchHHHHHHHHHHHHHHcCCCCCCcCEEEE
Q 047978 7 FQETQRPQANPANCVYQTDYPDFYFRITSSNHM---TELKEKFKRMYILVPKVPKLGKEAVSKAIKEWGQPISKITHLIS 83 (320)
Q Consensus 7 ~~I~a~~~~lP~~~i~~~e~~~~~~~~~~~~~~---~gi~~~~r~~~~~~e~~~~la~~Aa~~aL~~ag~~~~dId~li~ 83 (320)
.+|.|+|+|+|+++++|+|+.+.+ +.+++|+ +||++ ||++.++|+.++||++|+++||+++|++|+|||+||+
T Consensus 14 srI~g~g~ylP~~~v~n~el~~~~--~~~~e~I~~rtGI~~--R~~a~~~e~~~~la~~Aa~~aL~~ag~~~~dId~li~ 89 (350)
T 4ewp_A 14 SRIVAVGAYRPANLVPNEDLIGPI--DSSDEWIRQRTGIVT--RQRATAEETVPVMAVGAAREALERAGLQGSDLDAVIV 89 (350)
T ss_dssp EEEEEEEEECCSCEEEHHHHTTTT--TCCHHHHHHHHCCSE--EECCCSSCCHHHHHHHHHHHHHHHTTCCGGGCSEEEE
T ss_pred CEEEEEEEEcCCCeEcHHHHHHHh--CCCHHHHHhccCceE--EEEcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 689999999999999999999877 5667773 67877 8999889999999999999999999999999999999
Q ss_pred EeeCC-CCCCCHHHHHHHHcCCCcc-------hhhhhhh--------hhcCCCCeEEEEEeecccccccCCCCCCchhhh
Q 047978 84 CSVSG-VDMPGADYQLTKLLGLKPS-------VKRVMLT--------AESNAGARVLVVCSEITVGTFRAPSDENLSCLV 147 (320)
Q Consensus 84 ~s~t~-~~~p~~a~~l~~~LGl~~~-------~c~~~l~--------l~~~~~~~~LVv~~e~~s~~~~~~~~~~~~~~~ 147 (320)
+|+|+ +..|+++++||++||+++. .|+++++ +++++.++||||++|.+|+ +.+|.+ +.
T Consensus 90 ~t~t~~~~~P~~a~~v~~~LGl~~~~a~di~~~C~g~~~aL~~A~~~i~~g~~~~~Lvv~~E~~s~-~~d~~~-----~~ 163 (350)
T 4ewp_A 90 STVTFPHATPSAAALVAHEIGATPAPAYDVSAACAGYCYGVAQADALVRSGTARHVLVVGVERLSD-VVDPTD-----RS 163 (350)
T ss_dssp ECSCCSCSSSCHHHHHHHHTTCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGG-GCCTTC-----TT
T ss_pred EeccCCCCCCchHHHHHHHhCCCCceEEEeecchhhHHHHHHHhhhhhhCCCccceeEeeeeecee-cccccc-----cc
Confidence 99999 8999999999999999874 3888776 6789999999999999997 666665 34
Q ss_pred hhhhhccCceEEEEeecCCCCCCCCeeEEeccCce----ecCCC-----------------------cccccccccccc-
Q 047978 148 NRAIVGDGTAALIVGACPDINTERPLFHIVPTAQT----ILPDS-----------------------EDAIKGHFRESP- 199 (320)
Q Consensus 148 ~~~~~GDgAaA~ll~~~~~~~~~~~~~~~~~~~~~----~~p~~-----------------------~~~~~~~~~~~g- 199 (320)
+..+|||||+|+||++.+..++... .+.+.+.. ..+.. +......++++|
T Consensus 164 ~~~lfgDGA~A~vl~~~~~~~~~~~--~~~sdg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 241 (350)
T 4ewp_A 164 ISFLLGDGAGAVIVAASDEPGISPS--VWGSDGERWSTISMTHSQLELRDAVEHARTTGDASAITGAEGMLWPTLRQDGP 241 (350)
T ss_dssp TGGGBCEEEEEEEEEEESSCCBCCC--EEEECGGGTTSEEESSCHHHHHHHHHHHHHHSCCTTTTTCSSCSSCCEEECHH
T ss_pred cccccccchheeeeecccCCCccce--eeeecccccceeeecCCccccCcccccccccCCccccccccccccceeEehhH
Confidence 6789999999999998876543322 22222211 11110 000112466777
Q ss_pred ----eechhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHHHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHH
Q 047978 200 ----LIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLD 275 (320)
Q Consensus 200 ----~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~ 275 (320)
+..+.+++.++++|+++|++++|+ ++|++||+|+++++.+++.||+|++|+... ++++||||+|||+|++|+
T Consensus 242 ~v~~~a~~~~~~~i~~~L~~~gl~~~di--d~~v~Hq~~~~i~~~~~~~Lgl~~~~~~~~--~l~~~GNtssasi~~~L~ 317 (350)
T 4ewp_A 242 SVFRWAVWSMAKVAREALDAAGVEPEDL--AAFIPHQANMRIIDEFAKQLKLPESVVVAR--DIADAGNTSAASIPLAMH 317 (350)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHTCCGGGE--EEEEECCSCHHHHHHHHHHTTCCTTSEECC--THHHHCBCGGGHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHhhcCChhHh--ceEEecCCCHHHHHHHHHHcCcChHhEEec--ccccccchHHHHHHHHHH
Confidence 445788999999999999999996 499999999999999999999999997653 599999999999999999
Q ss_pred HHHHhchhcCCCCCCCCCceEEEEeeccchhhhheeeeec
Q 047978 276 EMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEAIVLRSI 315 (320)
Q Consensus 276 ~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~~l~~~ 315 (320)
+++++ |++++| |++++++||+|++|++++|||+
T Consensus 318 ~~~~~----g~~~~G---d~vll~~fG~G~t~~~~vlr~P 350 (350)
T 4ewp_A 318 RLLEE----NPELSG---GLALQIGFGAGLVYGAQVVRLP 350 (350)
T ss_dssp HHHHH----CGGGTT---SEEEEEEEETTTEEEEEEEECC
T ss_pred HHHHh----CCCCCc---CEEEEEEEchhhEeEEEEEEeC
Confidence 99999 999999 9999999999999999999985
No 2
>3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A
Probab=100.00 E-value=3.6e-54 Score=406.53 Aligned_cols=309 Identities=47% Similarity=0.814 Sum_probs=258.2
Q ss_pred ccceEEccccccCCCcccccccHHHHHhhh-cCCch---------h---HHHHHHHHHhhhccc----------------
Q 047978 4 LGKFQETQRPQANPANCVYQTDYPDFYFRI-TSSNH---------M---TELKEKFKRMYILVP---------------- 54 (320)
Q Consensus 4 ~~~~~I~a~~~~lP~~~i~~~e~~~~~~~~-~~~~~---------~---~gi~~~~r~~~~~~e---------------- 54 (320)
+.+++|.++|+|+|+++++|+|+.+.++.. .+++| + +||++ ||++.+++
T Consensus 14 ~~~~~I~~ig~~~P~~~v~n~e~~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~--R~~~~~~e~~~~~~~~~~~~~p~~ 91 (393)
T 3ov2_A 14 QGPATIMAIGTATPPNLYEQSTFPDFYFRVTNSDDKQELKKKFRRMCEKTMVKK--RYLHLTEEILKERPKLCSYKEASF 91 (393)
T ss_dssp SSCCEEEEEEEECCSCEEEGGGHHHHHHHHTTCTTCHHHHHHHHHHHHHTCCCE--EECSCCHHHHHHSGGGGSSSSCCH
T ss_pred CCCeEEEEEEeeCCCcccCHHHHHHHHHHhhcccchHHHHHHHHHHHHhcCCce--EEeecChhhhccCcccccCCCCCH
Confidence 356899999999999999999999986322 23333 1 44554 67765544
Q ss_pred ---------chHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcch---------hhhhhh--
Q 047978 55 ---------KVPKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPSV---------KRVMLT-- 114 (320)
Q Consensus 55 ---------~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~~---------c~~~l~-- 114 (320)
+..+|+++|+++||+++|++++|||+||++|++++..|+.+.+|+++||+++.. |+++++
T Consensus 92 ~~r~~~~~~~~~~La~~Aa~~aL~~ag~~~~dId~vi~~t~t~~~~p~~a~~v~~~LGl~~~~~~~~~v~~~C~g~~~al 171 (393)
T 3ov2_A 92 DDRQDIVVEEIPRLAKEAAEKAIKEWGRPKSEITHLVFCSISGIDMPGADYRLATLLGLPLTVNRLMIYSQACHMGAAML 171 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSCCCBSCHHHHHHHHHTCCTTSEEEEEESCCTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCCCCCCCHHHHHHHHcCCCCCcceeeEEcCccHHHHHHH
Confidence 589999999999999999999999999999999988999999999999998642 777665
Q ss_pred ------hhcCCCCeEEEEEeecccccccCCCCCCchhhhhhhhhccCceEEEEeecCCCCCCCCeeEEeccCceecCCCc
Q 047978 115 ------AESNAGARVLVVCSEITVGTFRAPSDENLSCLVNRAIVGDGTAALIVGACPDINTERPLFHIVPTAQTILPDSE 188 (320)
Q Consensus 115 ------l~~~~~~~~LVv~~e~~s~~~~~~~~~~~~~~~~~~~~GDgAaA~ll~~~~~~~~~~~~~~~~~~~~~~~p~~~ 188 (320)
++++..++||||++|.+|.++.+|.|++.+++.+..+|||||+|+||++++..++..+.+++.+.+...+|.+.
T Consensus 172 ~~A~~~i~sg~~~~vLvvg~E~~s~~~~~~~d~~~~~~~~~~lFGDGAaA~vl~~~~~~~~~~~~~~~~~~~~~~~p~~~ 251 (393)
T 3ov2_A 172 RIAKDLAENNRGARVLVVACEITVLSFRGPNEGDFEALAGQAGFGDGAGAVVVGADPLEGIEKPIYEIAAAMQETVAESQ 251 (393)
T ss_dssp HHHHHHHHHSTTCEEEEEEEECGGGTCCCCCTTCHHHHHHHHHBCCEEEEEEEESSCCTTTCCCSEEEEEEEEEECTTCT
T ss_pred HHHHHHHHcCCCCEEEEEEEeccchhccCCcccchhhhcccccccCccEEEEEEecCCCcccCceeEEEecCcEEecCCc
Confidence 67899999999999999866888887666666789999999999999987765444456788777777788766
Q ss_pred ccccccccccc-----------eechhHHHHHHHHhhhcCCCC-CCCCceEEEEcCCChhHHHHHHHHcCCCcchhhhhH
Q 047978 189 DAIKGHFRESP-----------LIADNIDKFLAESFDQVSLND-HDWNSLFWMMHPIGPAVLDQIEGKLGLEKTKLRETR 256 (320)
Q Consensus 189 ~~~~~~~~~~g-----------~~~~~~~~~i~~~l~~~g~~~-~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e~~~~~~ 256 (320)
+.+.+.+.+.| ++.+.++++++++|+++|+++ +| ++|++||+|+++++.++++||+|+||+..+|
T Consensus 252 ~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~d---i~~v~Hq~n~~i~~~v~~~Lgl~~ek~~~s~ 328 (393)
T 3ov2_A 252 GAVGGHLRAFGWTFYFLNQLPAIIADNLGRSLERALAPLGVREWND---VFWVAHPGNWAIIDAIEAKLQLSPDKLSTAR 328 (393)
T ss_dssp TSEEEEEETTEEEEEECTTHHHHHHTTSHHHHHHHHGGGTCCSGGG---SEEEECCCCHHHHHHHHHHHTCCTTTTHHHH
T ss_pred ccCceeeeCCceEEEECcHHHHHHHHHHHHHHHHHHHHcCCCcccC---cEEEECCCChHHHHHHHHHcCCCHHHHHHHH
Confidence 54444444433 345667889999999999996 65 4899999999999999999999999999988
Q ss_pred HHHhccCCcccchHHHHHHHHHHhchhcCCCCCCCCCceEEEEeeccchhhhheeeeeccC
Q 047978 257 HVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEAIVLRSIPM 317 (320)
Q Consensus 257 ~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~~l~~~~~ 317 (320)
+++++||||+|||+|++|++++++..++|++++|+|.|++++++||+|++|+++++|+.|-
T Consensus 329 ~~l~~~GNtssAsip~~L~~~~~~~~~~g~~~~G~~~d~vll~~fG~G~t~~~~ll~~~~~ 389 (393)
T 3ov2_A 329 HVFTEYGNMQSATVYFVMDELRKRSAVEGRSTTGDGLQWGVLLGFGPGLSIETVVLRSMPL 389 (393)
T ss_dssp HHHHHHCBCGGGHHHHHHHHHHHHHHHTTCSBTTTTCSEEEEEEEETTTEEEEEEEEECBC
T ss_pred HHHHHhCChHHhHHHHHHHHHHHhhhhcCCcCCCCCCCeEEEEEECccceeeeeeeEEccc
Confidence 8999999999999999999999764445899998666899999999999999999999874
No 3
>3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A
Probab=100.00 E-value=1.7e-52 Score=394.38 Aligned_cols=304 Identities=43% Similarity=0.737 Sum_probs=244.0
Q ss_pred ccceEEccccccCCCcccccccHHHHHhhhcC-Cc---------h---hHHHHHHHHHhhhccc----------------
Q 047978 4 LGKFQETQRPQANPANCVYQTDYPDFYFRITS-SN---------H---MTELKEKFKRMYILVP---------------- 54 (320)
Q Consensus 4 ~~~~~I~a~~~~lP~~~i~~~e~~~~~~~~~~-~~---------~---~~gi~~~~r~~~~~~e---------------- 54 (320)
.++++|.++|+|+|+++++|+|+.+.++...+ ++ | .+||++ ||++.+++
T Consensus 8 ~~~~~I~~ig~~~P~~~v~n~e~~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~--R~~~~~~e~~~~~~~~~~~~~p~~ 85 (387)
T 3oit_A 8 DGLAAVLAIGTANPPNCVTQEEIPDFYFRVTNSDHLTALKDKFKRICQEMGVQR--RYLHHTEEMLSAHPEFVDRDAPSL 85 (387)
T ss_dssp SSCCEEEEEEEECCSEEEETTTHHHHHHHHTTCTTCHHHHHHHHHHHHTSSCCE--EEESCCHHHHHHCGGGTCTTSCCH
T ss_pred CCCeEEEEEEeeCCCceecHHHHHHHHHHHhCccchHHHHHHHHHHHHhcCcce--eeeecCHHHhccCccccccCCCCH
Confidence 35699999999999999999999998743322 21 2 245555 67765544
Q ss_pred ---------chHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcc---------hhhhhhh--
Q 047978 55 ---------KVPKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPS---------VKRVMLT-- 114 (320)
Q Consensus 55 ---------~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~---------~c~~~l~-- 114 (320)
+..+|+++|+++||+++|++++|||+||++|++++..|+.+.+|+++||+++. .|+++++
T Consensus 86 ~~r~~~~~~~~~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~~~~p~~a~~v~~~LGl~~~~~~~~~~~~~C~~~~~al 165 (387)
T 3oit_A 86 DARLDIAADAVPELAAEAAKKAIAEWGRPAADITHLVVTTNSGAHVPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGCAAL 165 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSCCEESCHHHHHHHHHTCCTTCEEEEEECCGGGHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCCCCcccHHHHHHHHhCCCCCcceeeEECchhHHHHHHH
Confidence 68999999999999999999999999999999998899999999999999864 2777765
Q ss_pred ------hhcCCCCeEEEEEeecccccccCCCCCCchhhhhhhhhccCceEEEEeecCCCCCCCCeeEEeccCceecCCCc
Q 047978 115 ------AESNAGARVLVVCSEITVGTFRAPSDENLSCLVNRAIVGDGTAALIVGACPDINTERPLFHIVPTAQTILPDSE 188 (320)
Q Consensus 115 ------l~~~~~~~~LVv~~e~~s~~~~~~~~~~~~~~~~~~~~GDgAaA~ll~~~~~~~~~~~~~~~~~~~~~~~p~~~ 188 (320)
++++..++||||++|.+|.++.+|.|++.+++.+..+|||||+|+||++++. +...+.+++.+.+....|.++
T Consensus 166 ~~A~~~i~sg~~~~vLvvg~E~~s~~~~~~~d~~~~~~~~~~lFGDGAaA~vl~~~~~-~~~~~~~~~~~~~~~~~p~~~ 244 (387)
T 3oit_A 166 RLAKDLAENSRGARVLVVAAELTLMYFTGPDEGCFRTLLVQGLFGDGAAAVIVGADAD-DVERPLFEIVSAAQTIIPESD 244 (387)
T ss_dssp HHHHHHHHSSTTCEEEEEEEECGGGTCCCCCSSSCHHHHHHHHBCCEEEEEEEESSCC-SSCCCCEEEEEEEEEECTTCT
T ss_pred HHHHHHHhcCCCCEEEEEEEeccchhccCccccchHhhhcccccccceEEEEEecCCC-cccCCceEEEecccEEeCCCh
Confidence 6789999999999999986588887776667788999999999999998763 333346788877777788876
Q ss_pred ccccccccccc-----------eechhHHHHHHHHhhhc----CCCCCCCCceEEEEcCCChhHHHHHHHHcCCCcchhh
Q 047978 189 DAIKGHFRESP-----------LIADNIDKFLAESFDQV----SLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKTKLR 253 (320)
Q Consensus 189 ~~~~~~~~~~g-----------~~~~~~~~~i~~~l~~~----g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e~~~ 253 (320)
+.+.+.+.++| ++.+.++++++++|+++ |++ |+++++|++||+|+++++.++++||+|++|+.
T Consensus 245 ~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~~~~~L~~~~~~~gl~--d~d~~~~v~Hq~n~~il~~v~~~Lgl~~ek~~ 322 (387)
T 3oit_A 245 HALNMRFTERRLDGVLGRQVPGLIGDNVERCLLDMFGPLLGGDGGG--GWNDLFWAVHPGSSTIMDQVDAALGLEPGKLA 322 (387)
T ss_dssp TSEEEEECSSSEEEEECTTHHHHHHHHHHHHHHHHTGGGCC--------GGGSEEEECCCCHHHHHHHHHHHTCCTTTTH
T ss_pred hhccceeecCCeEEEECcHHHHHHHHHHHHHHHHHHHhhcccCCCC--cccccEEEECCCCHHHHHHHHHHcCCCHHHHH
Confidence 65555555555 23456678888999999 887 55435899999999999999999999999999
Q ss_pred hhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCCC---CCCceEEEEeeccchhhhheeeeeccC
Q 047978 254 ETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTG---EELEWGVLLGFEAGLTVEAIVLRSIPM 317 (320)
Q Consensus 254 ~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G---~~~d~vll~~~G~G~~~~a~~l~~~~~ 317 (320)
.+|+++++||||+|||+|++|+++++. ++++| +|.|++++++||+|++|+++++|+.|-
T Consensus 323 ~s~~~l~~~GNtssAsip~~L~~~~~~-----~~~~G~~g~~~d~vll~~fG~G~t~~~~ll~~~~~ 384 (387)
T 3oit_A 323 ASRRVLSDYGNMSGATVIFALDELRRQ-----RKEAAAAGEWPELGVMMAFGPGMTVDAMLLHATSH 384 (387)
T ss_dssp HHHHHHHHHCBCGGGHHHHHHHHHHHC---------------CCEEEEEEEETTTEEEEEEEEECC-
T ss_pred HHHHHHHHhCchHHhHHHHHHHHHHHh-----hhccCCCCCCCCEEEEEEecccceeeeeeeEeccc
Confidence 988899999999999999999998764 45555 122899999999999999999999874
No 4
>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae}
Probab=100.00 E-value=3e-51 Score=377.39 Aligned_cols=285 Identities=21% Similarity=0.266 Sum_probs=237.8
Q ss_pred ceEEccccccCCCcccccccHHHHHhhhcCCchh---HHHHHHHHHhhhcccchHHHHHHHHHHHHHHcCCCCCCcCEEE
Q 047978 6 KFQETQRPQANPANCVYQTDYPDFYFRITSSNHM---TELKEKFKRMYILVPKVPKLGKEAVSKAIKEWGQPISKITHLI 82 (320)
Q Consensus 6 ~~~I~a~~~~lP~~~i~~~e~~~~~~~~~~~~~~---~gi~~~~r~~~~~~e~~~~la~~Aa~~aL~~ag~~~~dId~li 82 (320)
+.+|.++|.|+|+++++|+|+.+.+ +.+++|+ +||++ ||++.+++++.+|+++|+++||+++|++|+|||.||
T Consensus 9 ~~~~~~~g~ylP~~~v~n~~l~~~~--~~~~~~i~~~tGi~~--R~~a~~~~~~~~La~~Aa~~aL~~ag~~~~~Id~vi 84 (323)
T 3il3_A 9 NSRILSTGSYLPSHIRTNADLEKMV--DTSDEWIVTRSGIRE--RRIAAEDETVATMGFEAAKNAIEAAQINPQDIELII 84 (323)
T ss_dssp EECCCEEEEECCSCEEEHHHHHTTS--SCCHHHHHHHTCCCE--EECCCTTCCHHHHHHHHHHHHHHHHCCCGGGCCEEE
T ss_pred cCceeEEEEECCCceEcHHHHHHHh--CCCHHHHHHhcCCcE--EEECCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 3689999999999999999999886 4556663 56776 889888999999999999999999999999999999
Q ss_pred EEeeCC-CCCCCHHHHHHHHcCCCcc-------hhhhhhh--------hhcCCCCeEEEEEeecccccccCCCCCCchhh
Q 047978 83 SCSVSG-VDMPGADYQLTKLLGLKPS-------VKRVMLT--------AESNAGARVLVVCSEITVGTFRAPSDENLSCL 146 (320)
Q Consensus 83 ~~s~t~-~~~p~~a~~l~~~LGl~~~-------~c~~~l~--------l~~~~~~~~LVv~~e~~s~~~~~~~~~~~~~~ 146 (320)
++|+++ +..|+.+.+|+.+||+++. .|+++++ ++++..+++|||++|..|. ..++.| +
T Consensus 85 ~~t~~~~~~~p~~a~~v~~~lGl~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~-~~~~~d-----~ 158 (323)
T 3il3_A 85 VATTSHSHAYPSAACQVQGLLNIDDAISFDLAAACTGFVYALSVADQFIRAGKVKKALVIGSDLNSR-KLDETD-----R 158 (323)
T ss_dssp EECSCCSCSSSCHHHHHHHHTTCSSCEEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGG-SCCTTC-----T
T ss_pred EEeCCCCCCCccHHHHHHHHhCCCCccEEEECCccHHHHHHHHHHHHHHHCCCCCEEEEEEeecccc-ccCccc-----c
Confidence 999999 8899999999999999753 3887765 6789999999999999997 555655 3
Q ss_pred hhhhhhccCceEEEEeecCCCCCCCCeeEEeccCce----ecCCCcc--cccccccccc-----eechhHHHHHHHHhhh
Q 047978 147 VNRAIVGDGTAALIVGACPDINTERPLFHIVPTAQT----ILPDSED--AIKGHFRESP-----LIADNIDKFLAESFDQ 215 (320)
Q Consensus 147 ~~~~~~GDgAaA~ll~~~~~~~~~~~~~~~~~~~~~----~~p~~~~--~~~~~~~~~g-----~~~~~~~~~i~~~l~~ 215 (320)
.+..+|||||+|+||++++..++. .+.+.+.+.. ..|.... ....++.++| ++.+.++++++++|++
T Consensus 159 ~~~~lfGDGA~A~vl~~~~~~~i~--~~~~~s~g~~~~~~~~~g~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~ 236 (323)
T 3il3_A 159 STVVLFGDGAGAVILEASEQEGII--STHLHASADKNNALVLAQPERGIEKSGYIEMQGNETFKLAVRELSNVVEETLLA 236 (323)
T ss_dssp TTTTTBCEEEEEEEEEEESSCCEE--EEEEEECCCCSCSEECCCCCTTCSSCSCCEECHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccccccccceEEEEEEEcCCCCeE--EEEEEEcCCCcceEEECCCCCCCCCCCcEEEcCHHHHHHHHHHHHHHHHHHHHH
Confidence 367899999999999987643221 1233333221 2332110 0112455666 4467788999999999
Q ss_pred cCCCCCCCCceEEEEcCCChhHHHHHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCCCCCCce
Q 047978 216 VSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEW 295 (320)
Q Consensus 216 ~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~ 295 (320)
+|++++|+ ++|++||+|+++++.+++.|++|+||++.+ +++||||++||+|++|++++++ |++++| |+
T Consensus 237 ~gl~~~di--d~~v~Hq~~~~i~~~~~~~lgl~~ek~~~~---l~~~GNt~sasi~~~L~~~~~~----g~~~~G---d~ 304 (323)
T 3il3_A 237 NNLDKKDL--DWLVPHQANLRIITATAKKLEMDMSQVVVT---LDKYANNSAATVPVALDEAIRD----GRIQRG---QL 304 (323)
T ss_dssp TTCCTTTC--CEEEECCSCHHHHHHHHHHTTCCGGGBCCC---HHHHCBCGGGHHHHHHHHHHHT----TSSCTT---CE
T ss_pred cCCCHHHC--CEEEEcCCCHHHHHHHHHHcCcCHHHhhcc---HhhcCchHHHHHHHHHHHHHHc----CCCCCC---CE
Confidence 99999997 399999999999999999999999999885 9999999999999999999998 999999 99
Q ss_pred EEEEeeccchhhhheeeee
Q 047978 296 GVLLGFEAGLTVEAIVLRS 314 (320)
Q Consensus 296 vll~~~G~G~~~~a~~l~~ 314 (320)
+++++||+|++|+++++||
T Consensus 305 vll~~~G~G~t~~~~~l~~ 323 (323)
T 3il3_A 305 LLLEAFGGGWTWGSALVRF 323 (323)
T ss_dssp EEEEEEETTTEEEEEEEEC
T ss_pred EEEEEEehhheeEEEEEEC
Confidence 9999999999999999997
No 5
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A
Probab=100.00 E-value=3.9e-51 Score=382.63 Aligned_cols=288 Identities=18% Similarity=0.236 Sum_probs=239.7
Q ss_pred ccceEEccccccCCCcccccccHHHHHhhhcCCchh---HHHHHHHHHhhhcccchHHHHHHHHHHHHHHcCCCCCCcCE
Q 047978 4 LGKFQETQRPQANPANCVYQTDYPDFYFRITSSNHM---TELKEKFKRMYILVPKVPKLGKEAVSKAIKEWGQPISKITH 80 (320)
Q Consensus 4 ~~~~~I~a~~~~lP~~~i~~~e~~~~~~~~~~~~~~---~gi~~~~r~~~~~~e~~~~la~~Aa~~aL~~ag~~~~dId~ 80 (320)
+++++|.++|+|+|+++++|+|+.+.+ .+.+.+|+ +||.+ ||++.++++..+|+.+|+++||+++|++|+|||+
T Consensus 28 ~~~v~I~gig~~lP~~~v~n~~l~~~~-~~~~~~~i~~~tGI~~--R~~a~~~~~~~~La~~Aa~~aL~~ag~~~~~Id~ 104 (365)
T 3gwa_A 28 PPRAAIADIAGHLPEQVLTNDVLAQLY-PDWPAEKILAKTGIRE--RRIAAPRETAADLAYEAARKLFAQGAVGADQVDF 104 (365)
T ss_dssp -CEEEEEEEEEECCSEEEEHHHHHHHC-TTCCHHHHHHHHCCCE--EEECCTTCCHHHHHHHHHHHHHHTTSCCGGGCCE
T ss_pred eccEEEEEEEEeCCCcEEcHHHHHHHc-cCCCHHHHHHhcCccE--EEECCCCCCHHHHHHHHHHHHHHHcCCCHHHCCE
Confidence 457999999999999999999999876 23445563 56776 8898889999999999999999999999999999
Q ss_pred EEEEeeCC-CCCCCHHHHHHHHcCCCc-c-------hhhhhhh--------hhcCCCCeEEEEEeecccccccCCCCCCc
Q 047978 81 LISCSVSG-VDMPGADYQLTKLLGLKP-S-------VKRVMLT--------AESNAGARVLVVCSEITVGTFRAPSDENL 143 (320)
Q Consensus 81 li~~s~t~-~~~p~~a~~l~~~LGl~~-~-------~c~~~l~--------l~~~~~~~~LVv~~e~~s~~~~~~~~~~~ 143 (320)
||++|+++ +..|+.+.+|+.+||+++ . .|+++++ ++++..++|||+++|..|. ..++.|
T Consensus 105 vi~~t~~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~C~s~~~Al~~A~~~i~~g~~~~vLvvg~e~~s~-~~~~~d--- 180 (365)
T 3gwa_A 105 VILCTQAPDYVLPTSACMLQHRLGIPTHAGALDVNLGCSGYVYGLSLAKGLVETGAARCVLLLTADTYSK-YLHPLD--- 180 (365)
T ss_dssp EEEEESSCSCSBSCHHHHHHHHTTCCTTSEEEEEECSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGGG-GSCTTC---
T ss_pred EEEEeCCCCCCCCcHHHHHHHHcCCCCCceEEEecccChHHHHHHHHHHHHHHcCCCCEEEEEEEchhhc-cCCccc---
Confidence 99999999 889999999999999983 2 3877655 6789999999999999997 555654
Q ss_pred hhhhhhhhhccCceEEEEeecCCC--CCCCCeeEEeccCc-----------eecCCCcccc------------ccccccc
Q 047978 144 SCLVNRAIVGDGTAALIVGACPDI--NTERPLFHIVPTAQ-----------TILPDSEDAI------------KGHFRES 198 (320)
Q Consensus 144 ~~~~~~~~~GDgAaA~ll~~~~~~--~~~~~~~~~~~~~~-----------~~~p~~~~~~------------~~~~~~~ 198 (320)
+.+..+|||||+|+||++++.. ++. .+.+.+.+. ...|.+.+.+ ..+++++
T Consensus 181 --r~~~~lfGDGAaA~vl~~~~~~~~~i~--~~~~~s~g~~~~~~~~~~gg~~~p~~~~~~~~~~~~~~~~~~~~~~~m~ 256 (365)
T 3gwa_A 181 --KSVRTLFGDGASATAVIAEHGELERIG--PFVFGTDGRGAPNLIVKAGLFREPKSADSAREHEDASGNVRTDEHLYMN 256 (365)
T ss_dssp --HHHHTTBCCEEEEEEEEEECSSSCSEE--EEEEEECGGGGGGEEECSSSSSSCCCTGGGCCEECTTSCEECTTSEEEC
T ss_pred --ccccccccceeEEEEEEecCCCCCceE--EEEEEEcCCCCCeEEecCCCcCCCCcccccccccccccccccccceEec
Confidence 4467899999999999987653 111 233433332 1123222211 1245666
Q ss_pred c-----eechhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHHHHHHcCCCcchhhhhHHHHhccCCcccchHHHH
Q 047978 199 P-----LIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFV 273 (320)
Q Consensus 199 g-----~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~ 273 (320)
| +..+.++++++++|+++|++++|+ ++|++||+|+++++.++++||+|+||+..+ +++||||+|||+|++
T Consensus 257 g~~v~~~~~~~~~~~i~~~L~~~gl~~~di--d~~v~Hq~n~~i~~~~~~~Lgl~~ek~~~~---l~~~GNtssAsipl~ 331 (365)
T 3gwa_A 257 GAEVMAFSLAEVPRAADRLLALAGEPRENI--DCFVLHQANRFMLDALRKKMKIPEHKFPVL---MEHCGNTVSSTLPLA 331 (365)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCGGGC--SEEEECCCCHHHHHHHHHHHTCCGGGSCCC---CTTTCBCGGGHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHcCCCHHHC--CEEEEcCCCHHHHHHHHHHhCCCHHHHHHH---HhcccchHHHHHHHH
Confidence 6 446788999999999999999997 399999999999999999999999999874 999999999999999
Q ss_pred HHHHHHhchhcCCCCCCCCCceEEEEeeccchhhhheeeee
Q 047978 274 LDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEAIVLRS 314 (320)
Q Consensus 274 L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~~l~~ 314 (320)
|++++++ |++++| |++++++||+|++|+++++||
T Consensus 332 L~~~~~~----g~~~~G---d~vll~~fG~G~t~~~~ll~~ 365 (365)
T 3gwa_A 332 LETMRAN----GTLARG---MRLMLLGFGVGYSWAGCLVNF 365 (365)
T ss_dssp HHHHHHT----TCCCTT---CEEEEEEEETTTEEEEEEEEC
T ss_pred HHHHHHc----CCCCCC---CEEEEEEEehhheeEEEEEEC
Confidence 9999999 999999 999999999999999999997
No 6
>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans}
Probab=100.00 E-value=2.2e-51 Score=382.88 Aligned_cols=292 Identities=16% Similarity=0.197 Sum_probs=242.1
Q ss_pred ccceEEccccccCCCcccccccHHHHHhhhcCCchh---HHHHHHHHHhhhcccchHHHHHHHHHHHHHHcCCCCCCcCE
Q 047978 4 LGKFQETQRPQANPANCVYQTDYPDFYFRITSSNHM---TELKEKFKRMYILVPKVPKLGKEAVSKAIKEWGQPISKITH 80 (320)
Q Consensus 4 ~~~~~I~a~~~~lP~~~i~~~e~~~~~~~~~~~~~~---~gi~~~~r~~~~~~e~~~~la~~Aa~~aL~~ag~~~~dId~ 80 (320)
+++++|.++|+|+|+++++|+|+.+.+. ..+.+|+ +||++ ||++.++++..+|+++|+++||+++|++|+|||+
T Consensus 14 ~~~v~I~~ig~~lP~~~v~n~~l~~~~~-~~~~~~i~~~tGI~~--R~~a~~~~~~~~La~~Aa~~aL~~agi~~~~Id~ 90 (354)
T 4efi_A 14 TQGARIAGVVSCVPSKQVDNDYFVERFD-ASAVRDVVKMIGVNR--RRWADAQTSAGDLCRKAGEKLLAGLGWQADSIDA 90 (354)
T ss_dssp EESEEEEEEEEEECSCEEEGGGGTTTSC-HHHHHHHHHHHCCSE--EECCCTTCCHHHHHHHHHHHHHHHHTCCGGGCCE
T ss_pred EcceEEEEEEEECCCcEEcHHHHHHHhC-CCcHHHHHHhcCCeE--EEEcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCE
Confidence 3469999999999999999999998752 1122453 56766 8888889999999999999999999999999999
Q ss_pred EEEEeeCC-CCCCCHHHHHHHHcCCC-cc-------hhhhhhh--------hhcCCCCeEEEEEeecccccccCCCCCCc
Q 047978 81 LISCSVSG-VDMPGADYQLTKLLGLK-PS-------VKRVMLT--------AESNAGARVLVVCSEITVGTFRAPSDENL 143 (320)
Q Consensus 81 li~~s~t~-~~~p~~a~~l~~~LGl~-~~-------~c~~~l~--------l~~~~~~~~LVv~~e~~s~~~~~~~~~~~ 143 (320)
||++|+++ +..|+.+.+|+++||++ +. .|+++++ ++++..++|||+++|..|. +.++.|
T Consensus 91 vi~~t~~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~-~~~~~d--- 166 (354)
T 4efi_A 91 LIFVSQTPNYRLPATAFVLQAELDLPASCLALDINLGCSGYPQALWLGMNLIQTGAAKRVLLAVGDTISK-MIDPTD--- 166 (354)
T ss_dssp EEEECSSCSCSSSCHHHHHHHHTTCCTTSEEEEECCCTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGGG-GCCTTC---
T ss_pred EEEEeCCCCCCCCcHHHHHHHHcCcCCCccEEeeCcccHHHHHHHHHHHHHHHCCCCCEEEEEEechhcc-cCCccc---
Confidence 99999999 88999999999999996 32 3877655 7789999999999999997 555654
Q ss_pred hhhhhhhhhccCceEEEEeecCCCCCCCCeeEEeccCc----eec------CCCccc-c------cccccccc-----ee
Q 047978 144 SCLVNRAIVGDGTAALIVGACPDINTERPLFHIVPTAQ----TIL------PDSEDA-I------KGHFRESP-----LI 201 (320)
Q Consensus 144 ~~~~~~~~~GDgAaA~ll~~~~~~~~~~~~~~~~~~~~----~~~------p~~~~~-~------~~~~~~~g-----~~ 201 (320)
+.+..+|||||+|+||++++..+.. .+.+.+.+. ... |.+.+. . ..+++++| +.
T Consensus 167 --~~~~~lfGDGA~A~vl~~~~~~~~~--~~~~~s~g~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~g~~v~~~~ 242 (354)
T 4efi_A 167 --RSTSLLFGDAGTMTALETSNGDAAA--HFIIGADGKGARNLIVPSGGFKPYDAAADERMAGKSPECLFMDGGEIFNFT 242 (354)
T ss_dssp --HHHHTTBCCEEEEEEEEECCSCCEE--EEEEEECGGGGGGEECCSSSSSCCCGGGCGGGTTCCTTSCEECHHHHHHHH
T ss_pred --cccccccccceeEEEEeecCCCCce--EEEEEEcCCCcceEEecCCCCCCCccccccccccccccceEEccHHHHHHH
Confidence 4468999999999999998764311 234444432 122 322211 0 12456666 34
Q ss_pred chhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHHHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHHhc
Q 047978 202 ADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRS 281 (320)
Q Consensus 202 ~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~ 281 (320)
.+.++++++++|+++|++++|+ ++|++||+|+++++.+++.||+|+||+..+ +++||||++||+|++|++++++
T Consensus 243 ~~~~~~~i~~~l~~~gl~~~di--d~~v~Hq~~~~i~~~~~~~Lgl~~ek~~~~---l~~~GNt~sasi~~~L~~~~~~- 316 (354)
T 4efi_A 243 LNAVPKLVSRTLDIAGRDKDSY--DAFLFHQANLFMLKHLAKKAGLPAERVPVN---IGEYGNTSCASIPLLITTELKD- 316 (354)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGC--SEEEECCCCHHHHHHHHHHTTCCGGGSCCC---HHHHCBCGGGHHHHHHHHHSHH-
T ss_pred HHHHHHHHHHHHHHcCCCHHHC--CEEEeCCCCHHHHHHHHHHhCcCHHHHHHH---HhhhCcHHHHHHHHHHHHHHHh-
Confidence 6788999999999999999997 399999999999999999999999999875 8999999999999999999998
Q ss_pred hhcCCCCCCCCCceEEEEeeccchhhhheeeeeccCc
Q 047978 282 VEEGKATTGEELEWGVLLGFEAGLTVEAIVLRSIPMV 318 (320)
Q Consensus 282 ~~~g~l~~G~~~d~vll~~~G~G~~~~a~~l~~~~~~ 318 (320)
|++++| |++++++||+|++|+++++||.+.+
T Consensus 317 ---g~~~~G---d~vll~~fG~G~t~~~~ll~~~~~~ 347 (354)
T 4efi_A 317 ---RLKEET---LQLGMFGFGVGYSWASAALAVGPLN 347 (354)
T ss_dssp ---HHHHSC---EEEEEEEEETTTEEEEEEEEECCCS
T ss_pred ---CCCCCC---CEEEEEEEchhhhheeeEEEECCcc
Confidence 889999 9999999999999999999999875
No 7
>1i88_A CHS2, chalcone synthase 2; polyketide synthase, transferase; 1.45A {Medicago sativa} SCOP: c.95.1.2 c.95.1.2 PDB: 1i89_A 1i86_A 1i8b_A 1bi5_A 1cml_A* 1d6f_A* 1chw_A* 1cgz_A* 1cgk_A* 1bq6_A* 1jwx_A 1d6i_A 1d6h_A* 1u0v_A 1u0w_A* 1z1e_A* 1z1f_A*
Probab=100.00 E-value=1.9e-49 Score=374.42 Aligned_cols=303 Identities=59% Similarity=0.946 Sum_probs=244.3
Q ss_pred cceEEccccccCCCcccccccHHHHHhhhcC----------Cch---hHHHHHHHHHhhhcc------------------
Q 047978 5 GKFQETQRPQANPANCVYQTDYPDFYFRITS----------SNH---MTELKEKFKRMYILV------------------ 53 (320)
Q Consensus 5 ~~~~I~a~~~~lP~~~i~~~e~~~~~~~~~~----------~~~---~~gi~~~~r~~~~~~------------------ 53 (320)
.+++|.++|+|+|+++++|+++.+.+....+ .+| .+||++ ||++.++
T Consensus 15 ~~~~I~g~g~~~P~~~v~n~~l~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~--R~~~~~~~~~~~~p~~~~~~~~~~~ 92 (389)
T 1i88_A 15 GPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSMIKR--RYMYLTEEILKENPNVCEYMAPSLD 92 (389)
T ss_dssp SCCEEEEEEEECCSCEEEGGGHHHHHHHHTTCTTCHHHHHHHHHHHHHSCCCE--EECSCCHHHHHHCHHHHSSSCSCHH
T ss_pred CCeEEEEEEeeCCCcccCHHHHHHHHHHhcccccchhHHHHHHHHHHhCCCCc--eeeecChhhhccCcchhcccCCChH
Confidence 3589999999999999999999987632121 123 245655 6776544
Q ss_pred -------cchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcc---h------hhhhhh---
Q 047978 54 -------PKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPS---V------KRVMLT--- 114 (320)
Q Consensus 54 -------e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~---~------c~~~l~--- 114 (320)
++..+|+.+|+++||+++|++++|||+||++|++++..|+.+.+|+++||+++. . |+++++
T Consensus 93 ~r~~~~~~~~~~La~~Aa~~aL~~agl~~~~Id~li~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~~v~~aC~~~~~al~ 172 (389)
T 1i88_A 93 ARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGAFAGGTVLR 172 (389)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCCSSCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEECCCCCCchHHHHHHHHcCcCCCchhheeECCccHHHHHHHH
Confidence 688999999999999999999999999999999998899999999999999863 2 777654
Q ss_pred -----hhcCCCCeEEEEEeecccccccCCCCCCchhhhhhhhhccCceEEEEeecCCCCCCCCeeEEeccCceecCCCcc
Q 047978 115 -----AESNAGARVLVVCSEITVGTFRAPSDENLSCLVNRAIVGDGTAALIVGACPDINTERPLFHIVPTAQTILPDSED 189 (320)
Q Consensus 115 -----l~~~~~~~~LVv~~e~~s~~~~~~~~~~~~~~~~~~~~GDgAaA~ll~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 189 (320)
++++..++||||++|..+..+.+|.|.+++++.+..+|||||+|+||++.+..++..+.+++.+.+...+|.+.+
T Consensus 173 ~A~~~i~~g~~~~vLvvg~E~~s~~~~~~~d~~~~~~~~~~lfGDGA~A~vl~~~~~~~~~~~~~~l~~~~~~~~p~~~~ 252 (389)
T 1i88_A 173 LAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPVPEIEKPIFEMVWTAQTIAPDSEG 252 (389)
T ss_dssp HHHHHHHTSTTCEEEEEEEECGGGTCCCCCTTCHHHHHHHHHBCCEEEEEEEESSCCTTTSCCCEEEEEEEEEECTTCTT
T ss_pred HHHHHHHcCCCCEEEEEEEecccHhHcCccccccccccccceEecceEEEEEecCCCCccCCCceEEEeeeeEEcCCCcc
Confidence 678999999999999998756677665555567789999999999999876543333346777666656676543
Q ss_pred cccccccccc-----------eechhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHHHHHHcCCCcchhhhhHHH
Q 047978 190 AIKGHFRESP-----------LIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKTKLRETRHV 258 (320)
Q Consensus 190 ~~~~~~~~~g-----------~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e~~~~~~~~ 258 (320)
.+.|.+.+.| +..+.+++.++++|+++|++ |+++++|++||+|.++++.+++.||+|+||+..+|++
T Consensus 253 ~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~--d~~di~~v~Hq~~~~i~~~~~~~lgl~~ek~~~~~~~ 330 (389)
T 1i88_A 253 AIDVHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGIS--DYNSIFWIAHPGGPAILDQVEQKLALKPEKMNATREV 330 (389)
T ss_dssp SEEEEEETTEEEEEECSCHHHHHHHHHHHHHHHHHGGGTCC--CTTSSEEEECCSCHHHHHHHHHHHTCCGGGGHHHHHH
T ss_pred cceeEEecCceEEEeccHHHHHHHHHHHHHHHHHHHhcCCC--chhhceEEECCCcHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 3333222222 34567888999999999998 4433589999999999999999999999999987778
Q ss_pred HhccCCcccchHHHHHHHHHHhchhcCCCCCC-----CCCceEEEEeeccchhhhheeeeecc
Q 047978 259 LSEYGNMASATVLFVLDEMRKRSVEEGKATTG-----EELEWGVLLGFEAGLTVEAIVLRSIP 316 (320)
Q Consensus 259 ~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G-----~~~d~vll~~~G~G~~~~a~~l~~~~ 316 (320)
+++||||++||+|++|++++++ |+ ++| +|.|++|+++||+|++|++++|||.|
T Consensus 331 l~~~GNtssAsi~~~L~~~~~~----g~-~~G~~~~g~~~d~vll~~fG~G~t~~~~ll~~~~ 388 (389)
T 1i88_A 331 LSEYGNMSSACVLFILDEMRKK----ST-QNGLKTTGEGLEWGVLFGFGPGLTIETVVLRSVA 388 (389)
T ss_dssp HHHHCBCGGGHHHHHHHHHHHH----HH-HTTCSBTTTTCSEEEEEEEETTTEEEEEEEEECB
T ss_pred HHHhCCchhhHHHHHHHHHHHh----cc-ccCCcccCCCCceEEEEEecCccEEEEEEEEecC
Confidence 9999999999999999999998 65 655 33489999999999999999999987
No 8
>3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A
Probab=100.00 E-value=3.8e-49 Score=372.14 Aligned_cols=310 Identities=57% Similarity=0.976 Sum_probs=245.0
Q ss_pred ceEEccccccCCCcccccccHHHHHhhhcC----------Cch---hHHHHHHHHHhhhcc-------------------
Q 047978 6 KFQETQRPQANPANCVYQTDYPDFYFRITS----------SNH---MTELKEKFKRMYILV------------------- 53 (320)
Q Consensus 6 ~~~I~a~~~~lP~~~i~~~e~~~~~~~~~~----------~~~---~~gi~~~~r~~~~~~------------------- 53 (320)
+++|.++|+|+|+++++|+|+.+.+....+ .+| .+||++ ||++.++
T Consensus 12 ~~~I~gig~~~P~~~v~n~~l~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~--R~~~~~~~~~~~~p~~~~~~~~~~~~ 89 (387)
T 3a5r_A 12 LATVMAIGTANPPNCYYQADFPDFYFRVTNSDHLINLKQKFKRLCENSRIEK--RYLHVTEEILKENPNIAAYEATSLNV 89 (387)
T ss_dssp CEEEEEEEEECCSCEEETTTHHHHHHHHTTCTTCHHHHHHHHHHHHTTTCCE--EECSCCHHHHHHCHHHHSSSSSCHHH
T ss_pred CcEEEEeeecCCCcccCHHHHHHHHHHhcccccchhhHHHHHHHHHhCCCCc--eEEecChhhhccCcccccccCCCHHH
Confidence 489999999999999999999987632121 123 256665 6776544
Q ss_pred ------cchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcc---h------hhhhhh----
Q 047978 54 ------PKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPS---V------KRVMLT---- 114 (320)
Q Consensus 54 ------e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~---~------c~~~l~---- 114 (320)
++..+|+.+|+++||+++|++++|||+||++|++++..|+.+.+|+++||+++. . |+++++
T Consensus 90 r~~~~~~~~~~La~~Aa~~aL~~ag~~~~~Id~li~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~~v~~aC~s~~~al~~ 169 (387)
T 3a5r_A 90 RHKMQVKGVAELGKEAALKAIKEWGQPKSKITHLIVCCLAGVDMPGADYQLTKLLDLDPSVKRFMFYHLGCYAGGTVLRL 169 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCEESCHHHHHHHHTTCCTTCEEEEEESCCTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCcHHHHHHHHcCcCCCcceeeeEccccHHHHHHHHH
Confidence 688999999999999999999999999999999987889999999999999864 2 777654
Q ss_pred ----hhcCCCCeEEEEEeecccccccCCCCCCchhhhhhhhhccCceEEEEeecCCCCCCCCeeEEeccCceecCCCccc
Q 047978 115 ----AESNAGARVLVVCSEITVGTFRAPSDENLSCLVNRAIVGDGTAALIVGACPDINTERPLFHIVPTAQTILPDSEDA 190 (320)
Q Consensus 115 ----l~~~~~~~~LVv~~e~~s~~~~~~~~~~~~~~~~~~~~GDgAaA~ll~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 190 (320)
++++..++||||++|..+..+.+|.|.+++++.+..+|||||+|+||++.+..++..+.+++.+.+....|...+.
T Consensus 170 A~~~i~~g~~~~vLvvg~e~~s~~~~~~~d~~~~~~~~~~lfGDGA~A~vl~~~~~~~~~~~~~~l~~~~~~~~p~~~~~ 249 (387)
T 3a5r_A 170 AKDIAENNKGARVLIVCSEMTTTCFRGPSETHLDSMIGQAILGDGAAAVIVGADPDLTVERPIFELVSTAQTIVPESHGA 249 (387)
T ss_dssp HHHHHHHSTTCEEEEEEEECCTTTCCCCCSSCCSSTTHHHHBCCEEEEEEEESSCCTTTCCCCEEEEEEEEEECTTCTTS
T ss_pred HHHHHHhCCCCEEEEEEEeccchhhcCCCccchhhccccceeccceeEEEEecCCCccccCCceEEEeeeEEEeCCChHh
Confidence 6789999999999999987566776544444567899999999999998765433333467776666666765433
Q ss_pred ccccccccc-----------eechhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHHHHHHcCCCcchhhhhHHHH
Q 047978 191 IKGHFRESP-----------LIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKTKLRETRHVL 259 (320)
Q Consensus 191 ~~~~~~~~g-----------~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e~~~~~~~~~ 259 (320)
+.|.+.+.| +..+.+++.++++|+++|++ |+++++|++||+|.++++.+++.|++|++|+..+++++
T Consensus 250 ~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~--d~~di~~v~Hq~~~~i~~~~~~~lgl~~ek~~~s~~~l 327 (387)
T 3a5r_A 250 IEGHLLESGLSFHLYKTVPTLISNNIKTCLSDAFTPLNIS--DWNSLFWIAHPGGPAILDQVTAKVGLEKEKLKVTRQVL 327 (387)
T ss_dssp EEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHGGGTCC--CGGGSEEEECCSCHHHHHHHHHHHTCCGGGGHHHHHHH
T ss_pred cCceEcCCCeEEEecchHHHHHHHHHHHHHHHHHHhcCCC--ChhheeEEECCCCHHHHHHHHHHcCCChHHhHHHHHHH
Confidence 322222222 34567788999999999998 33335899999999999999999999999999877789
Q ss_pred hccCCcccchHHHHHHHHHHhchhcCCCCCCCCCceEEEEeeccchhhhheeeeeccCcC
Q 047978 260 SEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEAIVLRSIPMVS 319 (320)
Q Consensus 260 ~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~~l~~~~~~~ 319 (320)
++||||++||+|++|++++++..+.|.+++|+|.|++++++||+|++|+++++||.|-.|
T Consensus 328 ~~~GNtssAsi~~~L~~~~~~g~~~G~~~~G~~~d~vll~~fG~G~t~~~~ll~~~~~~~ 387 (387)
T 3a5r_A 328 KDYGNMSSATVFFIMDEMRKKSLENGQATTGEGLEWGVLFGFGPGITVETVVLRSVPVIS 387 (387)
T ss_dssp HHHCBCGGGHHHHHHHHHHHHHHHTTCSBTTTTCSEEEEEEEETTTEEEEEEEEECBCC-
T ss_pred HhcCCcchhHHHHHHHHHHHhccccCCCCCCCCcceEEEEEecCcceeeehhheeccccC
Confidence 999999999999999999988211223344444589999999999999999999998764
No 9
>2p0u_A Stilbenecarboxylate synthase 2; polyketide synthase, PKS type transferase; 1.90A {Marchantia polymorpha}
Probab=100.00 E-value=6.4e-49 Score=373.19 Aligned_cols=305 Identities=49% Similarity=0.835 Sum_probs=245.4
Q ss_pred cceEEccccccCCCcccccccHHHHHhhhcC----------Cch---hHHHHHHHHHhhhcc------------------
Q 047978 5 GKFQETQRPQANPANCVYQTDYPDFYFRITS----------SNH---MTELKEKFKRMYILV------------------ 53 (320)
Q Consensus 5 ~~~~I~a~~~~lP~~~i~~~e~~~~~~~~~~----------~~~---~~gi~~~~r~~~~~~------------------ 53 (320)
.+++|.++|+|+|+++++|+++.+.+....+ .+| .+||++ ||++.++
T Consensus 33 ~~~~I~gig~~~P~~~v~n~~l~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~--R~~a~~~~~~~~~p~~~~~~~~~~~ 110 (413)
T 2p0u_A 33 GPATVLAMGKAVPANVFEQATYPDFFFNITNSNDKPALKAKFQRICDKSGIKK--RHFYLDQKILESNPAMCTYMETSLN 110 (413)
T ss_dssp SCCEEEEEEEECCSEEEEGGGHHHHHHHHTTCTTCHHHHHHHHHHHHTSSCSE--EEESCCHHHHHTCGGGGSSSSSCHH
T ss_pred CCeEEEEEEeeCCCCccCHHHHHHHHHHhccccchhhhHHHHHHHHHhcCcCc--eeEeeChhhhccCcccccccCCChH
Confidence 3589999999999999999999987632121 123 245665 6676544
Q ss_pred -------cchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcc---------hhhhhhh---
Q 047978 54 -------PKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPS---------VKRVMLT--- 114 (320)
Q Consensus 54 -------e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~---------~c~~~l~--- 114 (320)
++..+|+.+|+++||+++|++++|||+||++|++++..|+.+.+|+++||+++. .|+++++
T Consensus 111 ~r~~~~~~~~~~La~~Aa~~aL~~agl~~~dId~li~~t~~~~~~p~~a~~v~~~LGl~~~~~~~~~v~~aCas~~~AL~ 190 (413)
T 2p0u_A 111 CRQEIAVAQVPKLAKEASMNAIKEWGRPKSEITHIVMATTSGVNMPGAELATAKLLGLRPNVRRVMMYQQGAFAGATVLR 190 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSCCCBSCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHCCEEEEEecCCcccCcHHHHHHHHhCCCCCcceEeEECCccHHHHHHHH
Confidence 688999999999999999999999999999999998889999999999999863 2776654
Q ss_pred -----hhcCCCCeEEEEEeecccccccCCCCCCchhhhhhhhhccCceEEEEeecCCCCCCCCeeEEeccCceecCCCcc
Q 047978 115 -----AESNAGARVLVVCSEITVGTFRAPSDENLSCLVNRAIVGDGTAALIVGACPDINTERPLFHIVPTAQTILPDSED 189 (320)
Q Consensus 115 -----l~~~~~~~~LVv~~e~~s~~~~~~~~~~~~~~~~~~~~GDgAaA~ll~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 189 (320)
++++..++||||++|..+..+.+|.|++.+++.+..+|||||+|+||++++..++..+.+++.+.+...+|.+.+
T Consensus 191 ~A~~~i~sg~~~~vLvvg~E~~s~~~~~~~d~~~~~~~~~~lfGDGA~A~vl~~~~~~~~~~~~~~l~~~~~~~~p~~~~ 270 (413)
T 2p0u_A 191 VAKDLAENNAGARVLAICSEVTAVTFRAPSETHIDGLVGSALFGDGAAAVIVGSDPRPGIERPIYEMHWAGEMVLPESDG 270 (413)
T ss_dssp HHHHHHHHSTTCEEEEEEEECSTTTCCCCCTTCHHHHHHHHHBCCEEEEEEEESSCCTTTCCCSEEEEEEEEEECTTCTT
T ss_pred HHHHHHHhCCCCEEEEEEEhhcchhccCCCccChhhhcccceeecccEEEEEecCCCccccCCceEEEecccEEeCCChh
Confidence 678999999999999998756667665555567789999999999999876544333346777766666676543
Q ss_pred ccccccccc------c-----eechhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHHHHHHcCCCcchhhhhHHH
Q 047978 190 AIKGHFRES------P-----LIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKTKLRETRHV 258 (320)
Q Consensus 190 ~~~~~~~~~------g-----~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e~~~~~~~~ 258 (320)
.+.|.+.+. + +..+.++++++++|+++|++ |+++++|++||+|+++++.++++||+|++|+..++++
T Consensus 271 ~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~--d~~di~~v~Hq~~~~i~~~~~~~Lgl~~ek~~~s~~~ 348 (413)
T 2p0u_A 271 AIDGHLTEAGLVFHLLKDVPGLITKNIGGFLKDTKNLVGAS--SWNELFWAVHPGGPAILDQVEAKLELEKGKFQASRDI 348 (413)
T ss_dssp SSEEEEETTEEEEECCSCHHHHHHHHHHHHHHHHHHHTTCC--SGGGSEEEECCSSHHHHHHHHHHTTCCGGGGHHHHHH
T ss_pred hcCceEecCceEEEeccHHHHHHHHHHHHHHHHHHHHcCCC--CccceEEEECCCCHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 332222221 1 34577889999999999998 4443589999999999999999999999999987778
Q ss_pred HhccCCcccchHHHHHHHHHHhchhcCCCCCC-----CCCceEEEEeeccchhhhheeeeeccCc
Q 047978 259 LSEYGNMASATVLFVLDEMRKRSVEEGKATTG-----EELEWGVLLGFEAGLTVEAIVLRSIPMV 318 (320)
Q Consensus 259 ~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G-----~~~d~vll~~~G~G~~~~a~~l~~~~~~ 318 (320)
+++||||+|||+|++|++++++ ++ ++| +|.|++++++||+|++|++++|||.|+.
T Consensus 349 l~~~GNtssAsi~~~L~~~~~~----g~-~~G~~~~g~~~d~vll~~fG~G~t~~~~ll~~~~~~ 408 (413)
T 2p0u_A 349 LSDYGNMSSASVLFVLDRVRER----SL-ESNKSTFGEGSEWGFLIGFGPGLTVETLLLRALPLQ 408 (413)
T ss_dssp HHHHCBCGGGHHHHHHHHHHHH----HH-HTTCSBTTTTCSEEEEEEEETTTEEEEEEEEECBCC
T ss_pred HHHcCcchhhHHHHHHHHHHHh----cc-ccCCcccCCCcceEEEEEeCccceeeeeeEEEeccc
Confidence 9999999999999999999998 65 555 4448999999999999999999999864
No 10
>3awk_A Chalcone synthase-like polyketide synthase; type III polyketide synthase, transferase; 2.00A {Huperzia serrata} PDB: 3awj_A
Probab=100.00 E-value=7.1e-49 Score=371.78 Aligned_cols=303 Identities=52% Similarity=0.854 Sum_probs=244.3
Q ss_pred cceEEccccccCCCcccccccHHHHHhhhcC----------Cch---hHHHHHHHHHhhhcc------------------
Q 047978 5 GKFQETQRPQANPANCVYQTDYPDFYFRITS----------SNH---MTELKEKFKRMYILV------------------ 53 (320)
Q Consensus 5 ~~~~I~a~~~~lP~~~i~~~e~~~~~~~~~~----------~~~---~~gi~~~~r~~~~~~------------------ 53 (320)
++++|.++|+|+|+++++|+++.+.+....+ .+| .+||++ ||++.++
T Consensus 28 ~~~~I~g~g~~~P~~~v~n~~l~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~--R~~a~~~~~~~~~p~~~~~~~~~~~ 105 (402)
T 3awk_A 28 GPATILAIGTSNPTNIFEQSTYPDFFFDVTNCNDKTELKKKFQRICDKSGIKK--RHFHLTDEILRKNPSICKFKEASLD 105 (402)
T ss_dssp SCEEEEEEEEECCSEEEESTTHHHHHHHHTTCTTCHHHHHHHHHHHHHSSCSE--EEESCCHHHHHHSGGGGSSSSSCHH
T ss_pred CCeEEEEEEecCCCCccCHHHHHHHHHHhhcccchhhHHHHHHHHHHhcCcCc--eEEeeChhhhccCcccccccCCChH
Confidence 4589999999999999999999987632121 123 245655 6676544
Q ss_pred -------cchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcc---------hhhhhhh---
Q 047978 54 -------PKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPS---------VKRVMLT--- 114 (320)
Q Consensus 54 -------e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~---------~c~~~l~--- 114 (320)
++..+|+++|+++||+++|++|+|||+||++|++++..|+.+.+|+++||+++. .|+++++
T Consensus 106 ~r~~~~~~~~~~La~~Aa~~aL~~agl~~~~Id~vi~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~~v~~aC~s~~~al~ 185 (402)
T 3awk_A 106 PRQDIAVLEVPKLAKEAAISAIKQWGQPKSKITHLVFATTSGVDMPGADFQLAKLLGLRPTVKRVMLYQQGAYAGATVLR 185 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEECSCCCSSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCCCcCChHHHHHHHHcCCCCccceeeEECCccHHHHHHHH
Confidence 688999999999999999999999999999999998899999999999999864 2777655
Q ss_pred -----hhcCCCCeEEEEEeecccccccCCCCCCchhhhhhhhhccCceEEEEeecCCCCCCCCeeEEeccCceecCCCcc
Q 047978 115 -----AESNAGARVLVVCSEITVGTFRAPSDENLSCLVNRAIVGDGTAALIVGACPDINTERPLFHIVPTAQTILPDSED 189 (320)
Q Consensus 115 -----l~~~~~~~~LVv~~e~~s~~~~~~~~~~~~~~~~~~~~GDgAaA~ll~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 189 (320)
++++..++||||++|..+..+.+|.|.+++++.+..+|||||+|+||++++..++..+.+++.+.+...+|.+.+
T Consensus 186 ~A~~~i~sg~~~~vLvvg~E~~s~~~~~~~d~~~~~~~~~~lfGDGA~A~vl~~~~~~~~~~~~~~l~~~~~~~~p~~~~ 265 (402)
T 3awk_A 186 VAKDLAENNKGARVLVACSEVTAVTFRAPSETHLDGLVGSALFGDGAAALIVGSDPVPQEEKPLFEIHWAGEAVLPDSDG 265 (402)
T ss_dssp HHHHHHHTSTTCEEEEEEEECTTTTCCCCCTTCHHHHHHHHHBCCEEEEEEEESSCCTTTCCCCEEEEEEEEEECTTCTT
T ss_pred HHHHHHHcCCCCEEEEEEEeccchhhcCCCccCHHHhhccccccCceEEEEEecCCCccccCCceEEEeeeEEeeCCCch
Confidence 678999999999999998756667665555567789999999999999876544333346777766666676543
Q ss_pred cccccccccc-----------eechhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHHHHHHcCCCcchhhhhHHH
Q 047978 190 AIKGHFRESP-----------LIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKTKLRETRHV 258 (320)
Q Consensus 190 ~~~~~~~~~g-----------~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e~~~~~~~~ 258 (320)
.+.|.+.+.| +..+.++++++++|+++|++ |+++++|++||+|.++++.++++||+|++|+..+|++
T Consensus 266 ~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~--d~~di~~v~Hq~~~~i~~~~~~~lgl~~ek~~~s~~~ 343 (402)
T 3awk_A 266 AINGHLREAGLIFHLLKDVPGLISKNIDKVLAEPLEYVHFP--SYNDMFWAVHPGGPAILDQIEAKLGLSTDKMQASRDV 343 (402)
T ss_dssp SEEEEEETTEEEEEECTTHHHHHHHHHHHHTHHHHHHTTCC--CGGGEEEEECCSCHHHHHHHHHHTTCCTTTTHHHHHH
T ss_pred hcceEEecCceEEEeCchHHHHHHHHHHHHHHHHHHhcCCC--CccceeEEECCCcHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 3333222222 34567788889999999998 5544689999999999999999999999999987778
Q ss_pred HhccCCcccchHHHHHHHHHHhchhcCCCCCC-----CCCceEEEEeeccchhhhheeeeecc
Q 047978 259 LSEYGNMASATVLFVLDEMRKRSVEEGKATTG-----EELEWGVLLGFEAGLTVEAIVLRSIP 316 (320)
Q Consensus 259 ~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G-----~~~d~vll~~~G~G~~~~a~~l~~~~ 316 (320)
+++||||+|||+|++|++++++ |+ ++| +|.|++|+++||+|++|++++||+.+
T Consensus 344 l~~~GNtssAsi~~~L~~~~~~----g~-~~G~~~~g~g~d~vll~~fG~G~t~~~~ll~~~~ 401 (402)
T 3awk_A 344 LASYGNMSSASVLFVLDQIRKN----SE-ELHLPTTGEGFEWGFVIGFGPGLTVETLLLRSIN 401 (402)
T ss_dssp HHHHCBCGGGHHHHHHHHHHHH----HH-HTTCSBTTTTCSEEEEEEEETTTEEEEEEEEECB
T ss_pred HHHcCCchhhHHHHHHHHHHhh----cc-ccCCCcCCCCcceEEEEEecccceeeeheeeecc
Confidence 9999999999999999999998 65 655 44489999999999999999999874
No 11
>1ee0_A 2-pyrone synthase; polyketide synthase, thiolase fold, transferase; HET: CAA; 2.05A {Gerbera hybrid cultivar} SCOP: c.95.1.2 c.95.1.2 PDB: 1qlv_A
Probab=100.00 E-value=2.7e-49 Score=374.79 Aligned_cols=310 Identities=55% Similarity=0.899 Sum_probs=245.5
Q ss_pred ceEEccccccCCCcccccccHHHHHhhhcCC----------ch---hHHHHHHHHHhhhcc-------------------
Q 047978 6 KFQETQRPQANPANCVYQTDYPDFYFRITSS----------NH---MTELKEKFKRMYILV------------------- 53 (320)
Q Consensus 6 ~~~I~a~~~~lP~~~i~~~e~~~~~~~~~~~----------~~---~~gi~~~~r~~~~~~------------------- 53 (320)
+++|.++|+|+|+++++|+|+.+.+....+. +| .+||++ ||++.++
T Consensus 21 ~~~I~gig~~~P~~~v~n~~l~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~--R~~~~~~~~~~~~p~~~d~~~~~~~~ 98 (402)
T 1ee0_A 21 LATILAIGTATPPNCVAQADYADYYFRVTKSEHMVDLKEKFKRICEKTAIKK--RYLALTEDYLQENPTMCEFMAPSLNA 98 (402)
T ss_dssp CCEEEEEEEECCSCEEEHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTCCCE--EECSCCHHHHHHSGGGGSTTSSCHHH
T ss_pred CcEEEEeeecCCCcccCHHHHHHHHHHhhcccchhhhHHHHHHHHHhcCccc--eeEecCchhhccCcccccccCCCHHH
Confidence 5899999999999999999999876321211 23 245655 6776544
Q ss_pred ------cchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcc---------hhhhhhh----
Q 047978 54 ------PKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPS---------VKRVMLT---- 114 (320)
Q Consensus 54 ------e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~---------~c~~~l~---- 114 (320)
++..+|+.+|+++||+++|++++|||+||++|++++..|+.+.+|+++||+++. .|+++++
T Consensus 99 r~~~~~~~~~~La~~Aa~~aL~~agl~~~~Id~vi~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~~v~~aCss~~~al~~ 178 (402)
T 1ee0_A 99 RQDLVVTGVPMLGKEAAVKAIDEWGLPKSKITHLIFCTTAGVDMPGADYQLVKLLGLSPSVKRYMLYQQGAAAGGTVLRL 178 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEECSSCCEESCHHHHHHHHHTCCTTCEEEEECSCCTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCChHHHHHHHHcCcCCCcceeeEECchhHHHHHHHHH
Confidence 688999999999999999999999999999999988889999999999999864 2777655
Q ss_pred ----hhcCCCCeEEEEEeecccccccCCCCCCchhhhhhhhhccCceEEEEeecCCCCCCCCeeEEeccCceecCCCccc
Q 047978 115 ----AESNAGARVLVVCSEITVGTFRAPSDENLSCLVNRAIVGDGTAALIVGACPDINTERPLFHIVPTAQTILPDSEDA 190 (320)
Q Consensus 115 ----l~~~~~~~~LVv~~e~~s~~~~~~~~~~~~~~~~~~~~GDgAaA~ll~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 190 (320)
++++..++||||++|..|..+.+|.|.+++++.+..+|||||+|+||++.+..++..+.+++.+.+....|...+.
T Consensus 179 A~~~i~~g~~~~vLvvg~E~~s~~~~~~~d~~~~~~~~~~lfGDGA~A~vl~~~~~~~~~~~~~~l~~~~~~~~p~~~~~ 258 (402)
T 1ee0_A 179 AKDLAENNKGSRVLIVCSEITAILFHGPNENHLDSLVAQALFGDGAAALIVGSGPHLAVERPIFEIVSTDQTILPDTEKA 258 (402)
T ss_dssp HHHHHHHSTTCCEEEEEEECGGGGCCCCCTTCHHHHHHTTTBCCEEEEEEEESSCCTTTCCCCEEEEEEEEEECTTCGGG
T ss_pred HHHHHHcCCCCEEEEEEEeccchhhcCCcccchhhhccceeEecceEEEEEecCCCccccCCceEEEeeeeEEcCCchHh
Confidence 6789999999999999987676776655555667899999999999998765443333467777666666765443
Q ss_pred cccccccc------c-----eechhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHHHHHHcCCCcchhhhhHHHH
Q 047978 191 IKGHFRES------P-----LIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKTKLRETRHVL 259 (320)
Q Consensus 191 ~~~~~~~~------g-----~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e~~~~~~~~~ 259 (320)
+.|.+... + ++.+.+++.++++|+++|++ |+++++|++||+|+++++.+++.|++|++|+..+|+++
T Consensus 259 ~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~--d~~di~~v~Hq~~~~i~~~~~~~lgl~~ek~~~s~~~l 336 (402)
T 1ee0_A 259 MKLHLREGGLTFQLHRDVPLMVAKNIENAAEKALSPLGIT--DWNSVFWMVHPGGRAILDQVERKLNLKEDKLRASRHVL 336 (402)
T ss_dssp EEEEEETTEECCEECTTHHHHHHHHHHHHHHHHHGGGTCC--CGGGSEEEECCSSHHHHHHHHHHTTCCTTTTHHHHHHH
T ss_pred cCceeccCceEEEecchHHHHHHHHHHHHHHHHHHHcCCC--ccccceEEECCCCHHHHHHHHHHcCCChHHhHHHHHHH
Confidence 32222211 1 34567888999999999998 33335899999999999999999999999999877789
Q ss_pred hccCCcccchHHHHHHHHHHhchhcCCCCCCCCCceEEEEeeccchhhhheeeeeccCcC
Q 047978 260 SEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEAIVLRSIPMVS 319 (320)
Q Consensus 260 ~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~~l~~~~~~~ 319 (320)
++||||++||+|++|++++++..+.|++++|+|.|++|+++||+|++|++++|||.|...
T Consensus 337 ~~~GNtssAsi~~~L~~~~~~g~~~G~~~~G~~~d~vll~~fG~G~t~~~~ll~~~~~~~ 396 (402)
T 1ee0_A 337 SEYGNLISACVLFIIDEVRKRSMAEGKSTTGEGLDCGVLFGFGPGMTVETVVLRSVRVTA 396 (402)
T ss_dssp HHHCBCGGGHHHHHHHHHHHHHHHTTCSBTBTTBSEEEEEEEETTTEEEEEEEEECBCC-
T ss_pred HhcCCchhhHHHHHHHHHHHhccccCCCCCCCCcceEEEEEecCCcEEEEEEEEEecccc
Confidence 999999999999999999988211122334455589999999999999999999998753
No 12
>3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A*
Probab=100.00 E-value=4.2e-49 Score=362.95 Aligned_cols=283 Identities=18% Similarity=0.263 Sum_probs=228.9
Q ss_pred ccceEEccccccCCCcccccccHHHHHhhhcCCchh---HHHHHHHHHhhhcccchHHHHHHHHHHHHHHcCCCCCCcCE
Q 047978 4 LGKFQETQRPQANPANCVYQTDYPDFYFRITSSNHM---TELKEKFKRMYILVPKVPKLGKEAVSKAIKEWGQPISKITH 80 (320)
Q Consensus 4 ~~~~~I~a~~~~lP~~~i~~~e~~~~~~~~~~~~~~---~gi~~~~r~~~~~~e~~~~la~~Aa~~aL~~ag~~~~dId~ 80 (320)
-++++|.++|+|+|+++++|+|+.+.+ +.+++|+ +||.+ ||++.+++ ..+|+.+|+++||+++|++|+|||+
T Consensus 2 ~~~~~I~~~g~~lP~~~v~n~~~~~~~--~~~~~~i~~~~Gi~~--R~~a~~~e-~~~La~~Aa~~aL~~ag~~~~~Id~ 76 (321)
T 3il6_A 2 KNYARISCTSRYVPENCVTNHQLSEMM--DTSAAWIHSRTGISE--RRIVTQEN-TSDLCHQVAKQLLEKSGKQASEIDF 76 (321)
T ss_dssp CCEEEEEEEEEECCSCEEEHHHHHHHT--TSCHHHHHHHHSCSE--EECCSSCC-HHHHHHHHHHHHHHHHTCCGGGCCE
T ss_pred CCcEEEEEEEEECCCcEEcHHHHHHHh--CCChhhhhhhcCceE--EEECCCCC-HHHHHHHHHHHHHHHcCCCHHHCCE
Confidence 357999999999999999999999886 4555663 56776 88887777 9999999999999999999999999
Q ss_pred EEEEeeCC-CCCCCHHHHHHHHcCCCcc-------hhhhhhh--------hhcCCCCeEEEEEeecccccccCCCCCCch
Q 047978 81 LISCSVSG-VDMPGADYQLTKLLGLKPS-------VKRVMLT--------AESNAGARVLVVCSEITVGTFRAPSDENLS 144 (320)
Q Consensus 81 li~~s~t~-~~~p~~a~~l~~~LGl~~~-------~c~~~l~--------l~~~~~~~~LVv~~e~~s~~~~~~~~~~~~ 144 (320)
||++|+++ +..|+.+.+|+++||+++. .|+++++ ++++..+++||+++|.+|+ +.+|.|
T Consensus 77 li~~t~~~~~~~p~~a~~v~~~lGl~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~-~~~~~d---- 151 (321)
T 3il6_A 77 ILVATVTPDFNMPSVACQVQGAIGATEAFAFDISAACSGFVYALSMAEKLVLSGRYQTGLVIGGETFSK-MLDWTD---- 151 (321)
T ss_dssp EEEECSSCSCSSSCHHHHHHHHTTCTTCEEEEECCGGGHHHHHHHHHHHHHHTSSCCCEEEEEEECGGG-GSCTTC----
T ss_pred EEEEeCCCCcCCCcHHHHHHHHcCCCCceEEEeCcccHHHHHHHHHHHHHHHCCCCCEEEEEEEccccc-cCCccc----
Confidence 99999998 8899999999999999853 3877765 6789999999999999997 666765
Q ss_pred hhhhhhhhccCceEEEEeecCCCCCCCCeeEEeccCc----eecCCCcccc---------cccccccc-----eechhHH
Q 047978 145 CLVNRAIVGDGTAALIVGACPDINTERPLFHIVPTAQ----TILPDSEDAI---------KGHFRESP-----LIADNID 206 (320)
Q Consensus 145 ~~~~~~~~GDgAaA~ll~~~~~~~~~~~~~~~~~~~~----~~~p~~~~~~---------~~~~~~~g-----~~~~~~~ 206 (320)
+.+..+|||||+|+||++++..++. .+.+.+.+. ...|...... ..+++++| +..+.++
T Consensus 152 -r~~~~lfGDGA~A~vl~~~~~~~i~--~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~ 228 (321)
T 3il6_A 152 -RSTAVLFGDGAAGVLIEAAETPHFL--NEKLQADGQRWTALTSGYTINESPFYQGHKQASKTLQMEGRSIFDFAIKDVS 228 (321)
T ss_dssp -TTTGGGBCCEEEEEEEEEESSCCEE--EEEEEECGGGGGGEECCCCCCCSTTCCCCCCCCCSCEECHHHHHHHHHHHHH
T ss_pred -cccceeeccccEEEEEEEcCCCCEE--EEEEEEcCCCCCeEEeCCCCCCCCCCccccccccceeechHHHHHHHHHHHH
Confidence 3357899999999999998754211 123443332 1223211000 12366666 3345666
Q ss_pred HHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHHHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCC
Q 047978 207 KFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGK 286 (320)
Q Consensus 207 ~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~ 286 (320)
++++++|+ ++|+ ++|++||+|+++++.+++.||+|+||++. ++++||||+|||+|++|++++++ |+
T Consensus 229 ~~i~~~l~-----~~di--d~~v~Hq~~~~i~~~~~~~lgl~~ek~~~---~l~~~GNt~sasi~~~L~~~~~~----g~ 294 (321)
T 3il6_A 229 QNILSLVT-----DETV--DYLLLHQANVRIIDKIARKTKISREKFLT---NMDKYGNTSAASIPILLDEAVEN----GT 294 (321)
T ss_dssp HHHHTTCC-----GGGC--SEEEECCSCHHHHHHHHHHHTCCGGGBCC---CGGGTCBCGGGHHHHHHHHHHHT----TS
T ss_pred HHHHHHcC-----cccC--CEEEEcCCCHHHHHHHHHHcCcCHHHhhh---hHhhcccHHHHHHHHHHHHHHHh----CC
Confidence 66776666 6675 39999999999999999999999999987 49999999999999999999998 99
Q ss_pred CCCCCCCceEEEEeeccchhhhheeeee
Q 047978 287 ATTGEELEWGVLLGFEAGLTVEAIVLRS 314 (320)
Q Consensus 287 l~~G~~~d~vll~~~G~G~~~~a~~l~~ 314 (320)
+++|. .|++++++||+|++|+++++|+
T Consensus 295 ~~~G~-~d~vll~~fG~G~t~~~~~l~v 321 (321)
T 3il6_A 295 LILGS-QQRVVLTGFGGGLTWGSLLLTL 321 (321)
T ss_dssp SCTTS-CCEEEEEEEETTTEEEEEEEEC
T ss_pred CCCCC-CCEEEEEEEehhheeEEEEEEC
Confidence 99872 3799999999999999999985
No 13
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}
Probab=100.00 E-value=4e-49 Score=364.96 Aligned_cols=287 Identities=19% Similarity=0.208 Sum_probs=235.1
Q ss_pred ceEEccccccCCCcccccccHHHHHh---hhcCCchh---HHHHHHHHHhhhcccchHHHHHHHHHHHHHHcCCCCCCcC
Q 047978 6 KFQETQRPQANPANCVYQTDYPDFYF---RITSSNHM---TELKEKFKRMYILVPKVPKLGKEAVSKAIKEWGQPISKIT 79 (320)
Q Consensus 6 ~~~I~a~~~~lP~~~i~~~e~~~~~~---~~~~~~~~---~gi~~~~r~~~~~~e~~~~la~~Aa~~aL~~ag~~~~dId 79 (320)
+++|.++++|+|+++++|+|+.+.+. ...+.+|+ +||.+ ||++.++++..+|+.+|+++||+++|++++|||
T Consensus 11 ~v~I~g~g~~lP~~~v~~~~l~~~l~~~~~~~~~~~i~~rtgi~~--r~~~~~~~~~~~la~~Aa~~al~~ag~~~~~Id 88 (333)
T 4dfe_A 11 YSRVLGTGSYLPPNRVTNQDLAKRLAEQGIETSDEWIVARTGIHA--RYFAEPDVTTSDLAFIASQRAIEAADIDPQSID 88 (333)
T ss_dssp EEEEEEEEEECCSEEEEHHHHHHHHC---CCCCHHHHHHHHCCSE--EEECCTTCCHHHHHHHHHHHHHHHHTCCGGGCC
T ss_pred ceEEEEEEEECCCcEEcHHHHHHHhccccCCCCHHHhHHhcCceE--EEEcCCCCCHHHHHHHHHHHHHHHcCCCHHHCC
Confidence 58999999999999999999998741 12334552 45665 778778899999999999999999999999999
Q ss_pred EEEEEeeCC-CCCCCHHHHHHHHcCCCcc--------hhhhhhh--------hhcCCCCeEEEEEeecccccccCCCCCC
Q 047978 80 HLISCSVSG-VDMPGADYQLTKLLGLKPS--------VKRVMLT--------AESNAGARVLVVCSEITVGTFRAPSDEN 142 (320)
Q Consensus 80 ~li~~s~t~-~~~p~~a~~l~~~LGl~~~--------~c~~~l~--------l~~~~~~~~LVv~~e~~s~~~~~~~~~~ 142 (320)
+||++|+++ +..|+.+.+|+++||+++. .|+++++ ++++..++|||+++|..+. ..++.+
T Consensus 89 ~vi~~t~~~~~~~p~~a~~v~~~lgl~~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~-~~~~~d-- 165 (333)
T 4dfe_A 89 LIIVATSTPDFVFPSTACLLQNKLGIRNHGAAFDVQAVCSGFAYAVATADSFIRSGQHRTALVIGAETFSR-ILDFKD-- 165 (333)
T ss_dssp EEEEECSSCSSSBSCHHHHHHHHTTCCSCCEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGG-GCCTTC--
T ss_pred EEEEEeCCCCCCCCcHHHHHHHHhCCCCCCcEEEeCcccHHHHHHHHHHHHHHHcCCCCEEEEEEeecccc-ccCccc--
Confidence 999999999 8899999999999999432 3887665 6789999999999999997 445654
Q ss_pred chhhhhhhhhccCceEEEEeecCCCCCCCCeeEEeccCce----ecCCCcc----cccccccccc-----eechhHHHHH
Q 047978 143 LSCLVNRAIVGDGTAALIVGACPDINTERPLFHIVPTAQT----ILPDSED----AIKGHFRESP-----LIADNIDKFL 209 (320)
Q Consensus 143 ~~~~~~~~~~GDgAaA~ll~~~~~~~~~~~~~~~~~~~~~----~~p~~~~----~~~~~~~~~g-----~~~~~~~~~i 209 (320)
+.+..+|||||+|+||++.+..++. .+.+.+.+.. ..|.... ....++.++| +..+.+++++
T Consensus 166 ---~~~~~lfGDGA~A~vl~~~~~~~i~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i 240 (333)
T 4dfe_A 166 ---RTTCVLFGDGAGAVILQASDEPGVL--ASALHADGSHSNILCTPGNVNGGVVSGSAFLHMDGQAVFKLAVNVLEKVA 240 (333)
T ss_dssp ---TTTTTTBCEEEEEEEEEEESSCSEE--EEEEEECGGGGGGEEBCEEEETTEEEECCSCEECHHHHHHHHHHHHHHHH
T ss_pred ---ccceeeeccccEEEEEEEcCCCCeE--EEEEEEccCCcCeEEECCCCCCcccccCcceeeccHHHHHHHHHHHHHHH
Confidence 3357899999999999987643321 1233333321 1222100 0012355566 3457888999
Q ss_pred HHHhhhcCCCCCCCCceEEEEcCCChhHHHHHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCC
Q 047978 210 AESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATT 289 (320)
Q Consensus 210 ~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~ 289 (320)
+++|+++|++++|+ ++|++||+|+++++.+++.|++|+||+..+ +++||||++||+|++|++++++ |++++
T Consensus 241 ~~~l~~~gl~~~di--d~~~~Hq~~~~i~~~~~~~lgl~~~~~~~~---l~~~GNt~sasi~~~L~~~~~~----g~~~~ 311 (333)
T 4dfe_A 241 VEALEKANLSAEQI--DWLIPHQANIRIMQSTCRKLGLPQERMIVT---VGEHGNTSAASIPLALDVAVRD----GRIKR 311 (333)
T ss_dssp HHHHHHTTCCGGGC--SEEEECCSCHHHHHHHHHHTTCCGGGBCCC---HHHHCBCGGGHHHHHHHHHHHT----TCSCT
T ss_pred HHHHHHcCCCHHHC--CEEEEcCCCHHHHHHHHHHhCCCHHHhhhh---HHhcCchHHHHHHHHHHHHHHc----CCCCC
Confidence 99999999999986 399999999999999999999999999885 9999999999999999999998 99999
Q ss_pred CCCCceEEEEeeccchhhhheeeee
Q 047978 290 GEELEWGVLLGFEAGLTVEAIVLRS 314 (320)
Q Consensus 290 G~~~d~vll~~~G~G~~~~a~~l~~ 314 (320)
| |++++++||+|++|+++++||
T Consensus 312 G---d~vll~~~G~G~t~~~~ll~~ 333 (333)
T 4dfe_A 312 G---QNVLIEGVGGGFTWGASVIRY 333 (333)
T ss_dssp T---CEEEEEEEETTTEEEEEEEEC
T ss_pred C---CEEEEEEEchhheeEEEEEEC
Confidence 9 999999999999999999997
No 14
>1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A
Probab=100.00 E-value=6.7e-49 Score=373.04 Aligned_cols=309 Identities=54% Similarity=0.849 Sum_probs=244.7
Q ss_pred cceEEccccccCCCcccccccHHHHHhhhcC----------Cch---hHHHHHHHHHhhhcc------------------
Q 047978 5 GKFQETQRPQANPANCVYQTDYPDFYFRITS----------SNH---MTELKEKFKRMYILV------------------ 53 (320)
Q Consensus 5 ~~~~I~a~~~~lP~~~i~~~e~~~~~~~~~~----------~~~---~~gi~~~~r~~~~~~------------------ 53 (320)
.+++|.++|+|+|+++++|+|+.+.++...+ .+| .+||++ ||++.++
T Consensus 37 ~~~~I~gig~~lP~~~v~n~el~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~--R~~a~~~~~~~~~p~~~~~~~~~~~ 114 (413)
T 1xes_A 37 GFASILAIGTANPPNAVDQSTYPDFYFRITGNEHNTELKDKFKRICERSAIKQ--RYMYLTEEILKKNPDVCAFVEVPSL 114 (413)
T ss_dssp SCEEEEEEEEECCSCEEEGGGHHHHHHHHTTCTTCHHHHHHHHHHHHTSCCCE--EECSCCHHHHHTCHHHHSSSSSCCH
T ss_pred CCeEEEEEeecCCCCccCHHHHHHHHHHhccccchhhhHHHHHHHHhhcCcCc--eEEeeChhhhccCccccccccCCCH
Confidence 4589999999999999999999987632221 123 245665 6776543
Q ss_pred --------cchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcc---------hhhhhhh--
Q 047978 54 --------PKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPS---------VKRVMLT-- 114 (320)
Q Consensus 54 --------e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~---------~c~~~l~-- 114 (320)
++..+|+.+|+++||+++|++++|||+||++|++++..|+.+.+|+.+||+++. .|+++++
T Consensus 115 ~~r~~~~~~~~~~La~~Aa~~AL~~agl~~~~Id~li~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~~v~~aCas~~~AL 194 (413)
T 1xes_A 115 DARQAMLAMEVPRLAKEAAEKAIQEWGQSKSGITHLIFCSTTTPDLPGADFEVAKLLGLHPSVKRVGVFQHGCFAGGTVL 194 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESCCCEESCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCCCccchHHHHHHHHcCcCCccchhceecCccHHHHHHH
Confidence 478999999999999999999999999999999997789999999999999864 2776655
Q ss_pred ------hhcCCCCeEEEEEeecccccccCCCCCCchhhhhhhhhccCceEEEEeecCCCCCCCCeeEEeccCceecCCCc
Q 047978 115 ------AESNAGARVLVVCSEITVGTFRAPSDENLSCLVNRAIVGDGTAALIVGACPDINTERPLFHIVPTAQTILPDSE 188 (320)
Q Consensus 115 ------l~~~~~~~~LVv~~e~~s~~~~~~~~~~~~~~~~~~~~GDgAaA~ll~~~~~~~~~~~~~~~~~~~~~~~p~~~ 188 (320)
++++..++||||++|..+..+.+|.+...+.+.+..+|||||+|+||++.+..++..+.+++.+.+...+|.+.
T Consensus 195 ~~A~~~i~~G~~~~vLvvg~E~~s~~~~~~~d~~~~~~~~~~lfGDGA~A~vl~~~~~~~~~~~~~~l~~~~~~~~p~~~ 274 (413)
T 1xes_A 195 RMAKDLAENNRGARVLVICSETTAVTFRGPSETHLDSLVGQALFGDGASALIVGADPIPQVEKACFEIVWTAQTVVPNSE 274 (413)
T ss_dssp HHHHHHHHTSTTCCEEEEEEECTTTTCCCCCTTCHHHHHHHHHBCCEEEEEEEESSCCTTTSCCSEEEEEEEEEECTTCT
T ss_pred HHHHHHHHcCCCCEEEEEEehhhhhhhcCCCccchhhcccceeEecccEEEEEecCCCccccCCceEEEeeeeEEcCCCh
Confidence 67899999999999999875666765444556678999999999999987654433334677776666667654
Q ss_pred ccccccccccc-----------eechhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHHHHHHcCCCcchhhhhHH
Q 047978 189 DAIKGHFRESP-----------LIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKTKLRETRH 257 (320)
Q Consensus 189 ~~~~~~~~~~g-----------~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e~~~~~~~ 257 (320)
..+.+.+.+.| ++.+.+++.++++|+++|++ |+++++|++||+|.++++.+++.||+|+||+..+++
T Consensus 275 ~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~--d~~di~~v~Hq~~~~i~~~~~~~Lgl~~ek~~~s~~ 352 (413)
T 1xes_A 275 GAIGGKVREVGLTFQLKGAVPDLISANIENCMVEAFSQFKIS--DWNKLFWVVHPGGRAILDRVEAKLNLDPTKLIPTRH 352 (413)
T ss_dssp TTEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHGGGTCC--CGGGSEEEECCSCHHHHHHHHHHTTCCTTTTHHHHH
T ss_pred hhcCcEEecCceEEEecccHHHHHHHHHHHHHHHHHHhcCCC--CccceeEEECCCCHHHHHHHHHHcCCChHHhHHHHH
Confidence 33322222211 34577888999999999998 444358999999999999999999999999998777
Q ss_pred HHhccCCcccchHHHHHHHHHHhchhcCCCCCCCCCceEEEEeeccchhhhheeeeeccC
Q 047978 258 VLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEAIVLRSIPM 317 (320)
Q Consensus 258 ~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~~l~~~~~ 317 (320)
++++||||++||+|++|++++++..+.|++++|+|.|++|+++||+|++|++++|||.|-
T Consensus 353 ~l~~~GNtssAsi~~~L~~~~~~g~~~G~~~~G~~~d~vll~~fG~G~t~~~~ll~~~~~ 412 (413)
T 1xes_A 353 VMSEYGNMSSACVHFILDQTRKASLQNGCSTTGEGLEMGVLFGFGPGLTIETVVLKSVPI 412 (413)
T ss_dssp HHHHHCBCGGGHHHHHHHHHHHHHHHTTCSBTTTTCSEEEEEEEETTTEEEEEEEEECBC
T ss_pred HHHhcCcCchhhHHHHHHHHHHhccccCCCCCCCCcceEEEEEecCCcEEeEEEEEeccC
Confidence 899999999999999999999882222334444555899999999999999999999873
No 15
>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A*
Probab=100.00 E-value=4.6e-49 Score=367.59 Aligned_cols=290 Identities=21% Similarity=0.204 Sum_probs=236.7
Q ss_pred ccceEEccccccCCCcccccccHHHHHhhhcCCchh---HHHHHHHHHhhhcccchHHHHHHHHHHHHHHcCCCCCCcCE
Q 047978 4 LGKFQETQRPQANPANCVYQTDYPDFYFRITSSNHM---TELKEKFKRMYILVPKVPKLGKEAVSKAIKEWGQPISKITH 80 (320)
Q Consensus 4 ~~~~~I~a~~~~lP~~~i~~~e~~~~~~~~~~~~~~---~gi~~~~r~~~~~~e~~~~la~~Aa~~aL~~ag~~~~dId~ 80 (320)
.++++|.++++|+|+++++|+++.+.+ +.+++|+ +||.+ ||++.++++..+|+.+|+++||+++|++|+|||+
T Consensus 23 ~~~~~I~~~g~~~P~~~v~~~~l~~~~--~~~~~~i~~~tGi~~--R~~a~~~~~~~~La~~Aa~~aL~~agl~~~dId~ 98 (359)
T 3h78_A 23 QGNPILAGLGFSLPKRQVSNHDLVGRI--NTSDEFIVERTGVRT--RYHVEPEQAVSALMVPAARQAIEAAGLLPEDIDL 98 (359)
T ss_dssp -CCCEEEEEEEECCSEEEEHHHHTTTS--SCCHHHHHHHHCCCE--EEECCTTCCTHHHHHHHHHHHHHHTTCCGGGCCE
T ss_pred CCCcEEEEEEEECCCceEcHHHHHHHh--CCCHHHHHHhcCceE--EEEcCCCCCHHHHHHHHHHHHHHhcCCCHHHCCE
Confidence 356999999999999999999999876 4455663 46666 8888889999999999999999999999999999
Q ss_pred EEEEeeCC-CCCCCHHHHHHHHcCCCcc-------hhhhhhh--------hhcCCCCeEEEEEeecccccccCCCCCCch
Q 047978 81 LISCSVSG-VDMPGADYQLTKLLGLKPS-------VKRVMLT--------AESNAGARVLVVCSEITVGTFRAPSDENLS 144 (320)
Q Consensus 81 li~~s~t~-~~~p~~a~~l~~~LGl~~~-------~c~~~l~--------l~~~~~~~~LVv~~e~~s~~~~~~~~~~~~ 144 (320)
||++|+++ +..|+.+.+|+++||+++. .|+++++ ++++..++||||++|.+|. +.++.|+.
T Consensus 99 vi~~t~~~~~~~p~~a~~v~~~lGl~~~~~~~v~~aC~s~~~Al~~A~~~i~sG~~~~vLvvg~e~~S~-~~~~~d~~-- 175 (359)
T 3h78_A 99 LLVNTLSPDHHDPSQACLIQPLLGLRHIPVLDIRAQASGLLYGLQMARGQILAGLARHVLVVCGEVLSK-RMDCSDRG-- 175 (359)
T ss_dssp EEEECSSCSSSBSCHHHHHHHHHTCCSCCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEECGG-GCCCSTTT--
T ss_pred EEEEeCCCCCCCCcHHHHHHHHcCCCCCcEEEECCHhHHHHHHHHHHHHHHHCCCcCEEEEEEEchhcc-cCCccccc--
Confidence 99999999 8899999999999999753 3877665 6789999999999999997 55565521
Q ss_pred hhhhhhhhccCceEEEEeecCC-C-CCCCCeeEEeccCce----ecCC--Ccc----------cccccccccc-----ee
Q 047978 145 CLVNRAIVGDGTAALIVGACPD-I-NTERPLFHIVPTAQT----ILPD--SED----------AIKGHFRESP-----LI 201 (320)
Q Consensus 145 ~~~~~~~~GDgAaA~ll~~~~~-~-~~~~~~~~~~~~~~~----~~p~--~~~----------~~~~~~~~~g-----~~ 201 (320)
+.+..+|||||+|+||++++. . ++. .+.+.+.+.. ..|. ... ....++.++| ++
T Consensus 176 -~~t~~lfGDGAaA~vl~~~~~~~~~i~--~~~~~s~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~m~g~~v~~~~ 252 (359)
T 3h78_A 176 -RNLSILLGDGAGAVVVSAGESLEDGLL--DLRLGADGNYFDLLMTAAPGSASPTFLDENVLREGGGEFLMRGRPMFEHA 252 (359)
T ss_dssp -HHHHTTBCEEEEEEEEECCSCSSSEEE--EEEEEECGGGGGGEEBCCSSTTSSSTTCHHHHHTTTTSCEECHHHHHHHH
T ss_pred -ccccceecceeEEEEEEecCCCCCceE--EEEEEEccCccceEEeCCCCCccCCccccccccccCCceEeccHHHHHHH
Confidence 346789999999999998764 2 211 1233333321 2331 100 0112356666 45
Q ss_pred chhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHHHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHHhc
Q 047978 202 ADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRS 281 (320)
Q Consensus 202 ~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~ 281 (320)
.+.++++++++|+++|++++|| ++|++||+|+++++.++++||+|+||+..+ +++||||++||+|++|++++++
T Consensus 253 ~~~~~~~i~~~L~~~gl~~~di--d~~v~Hq~n~~i~~~~~~~lgl~~ek~~~~---l~~~GNt~sAsi~l~L~~~~~~- 326 (359)
T 3h78_A 253 SQTLVRIAGEMLAAHELTLDDI--DHVICHQPNLRILDAVQEQLGIPQHKFAVT---VDRLGNMASASTPVTLAMFWPD- 326 (359)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGC--SEEEECCSCHHHHHHHHHHHTCCGGGBCCC---HHHHCBCGGGHHHHHHHHHGGG-
T ss_pred HHHHHHHHHHHHHHcCCCHHHC--CEEEECCCCHHHHHHHHHHhCcCHHHhhhh---hhcccchHHHHHHHHHHHHHHh-
Confidence 6788999999999999999997 399999999999999999999999999885 9999999999999999999874
Q ss_pred hhcCCCCCCCCCceEEEEeeccchhhhheeeeeccC
Q 047978 282 VEEGKATTGEELEWGVLLGFEAGLTVEAIVLRSIPM 317 (320)
Q Consensus 282 ~~~g~l~~G~~~d~vll~~~G~G~~~~a~~l~~~~~ 317 (320)
+++| |++++++||+|++|+++++||+.-
T Consensus 327 -----l~~G---d~vll~~fG~G~t~~~~ll~~~~~ 354 (359)
T 3h78_A 327 -----IQPG---QRVLVLTYGSGATWGAALYRKPEE 354 (359)
T ss_dssp -----SCTT---CEEEEEEEETTTEEEEEEEECC--
T ss_pred -----CCCC---CEEEEEEEchhhhheeeeEEehhh
Confidence 7899 999999999999999999999753
No 16
>3euo_A Type III pentaketide synthase; alpha helix, acyltransferase, transferase; 1.75A {Neurospora crassa} PDB: 3eut_A* 3euq_A*
Probab=100.00 E-value=1.5e-48 Score=366.68 Aligned_cols=300 Identities=22% Similarity=0.260 Sum_probs=235.0
Q ss_pred ceEEccccccCCCcccccccHHHHHhhhc-CCch---------hHHHHHHHHHhhhc---------------------cc
Q 047978 6 KFQETQRPQANPANCVYQTDYPDFYFRIT-SSNH---------MTELKEKFKRMYIL---------------------VP 54 (320)
Q Consensus 6 ~~~I~a~~~~lP~~~i~~~e~~~~~~~~~-~~~~---------~~gi~~~~r~~~~~---------------------~e 54 (320)
.++|.++|+|+|+++++|+|+.+.+.... ..++ .+||++ ||++.+ .+
T Consensus 2 ~v~I~~ig~~~P~~~v~~~e~~~~~~~~~~~~~~~~~~~~i~~~tGI~~--R~~~~~~~~~~~~~~~~~s~~~r~~~~~~ 79 (379)
T 3euo_A 2 GLSITGLGVQYPPYSLGPDAIDILSKRYHPESPAMKKVLAINRYTGIDQ--RSSIGNPDHPLVNKPNPPTVKELHEVFMS 79 (379)
T ss_dssp CCEEEEEEEECCSEEECTHHHHHHHHHHCCCCHHHHHHHHHTTSSCCCC--EEESSCTTCGGGSSSSCCCHHHHHHHHHH
T ss_pred ceEEEEEEeeCCCceeCHHHHHHHHHHhcccchhHHHHHHHHHhCCcce--eeeeecCcCcccccccCCCHHHHHHHHHH
Confidence 37899999999999999999976542111 1111 246665 677621 14
Q ss_pred chHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcc---------hhhhhhh--------hhc
Q 047978 55 KVPKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPS---------VKRVMLT--------AES 117 (320)
Q Consensus 55 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~---------~c~~~l~--------l~~ 117 (320)
++.+|+++|+++||+++|++++|||+||++|++.+..|+.+.+|+++||+++. .|+++++ +++
T Consensus 80 ~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~p~~a~~v~~~LGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~a 159 (379)
T 3euo_A 80 DGVPLAVEASRKAMAEARLVPAQITHMVSTTCTDSANPGYDHYVAKELGLSDRLEKVLLHGIGASGGLAALRTAANLCLG 159 (379)
T ss_dssp HTHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCCCSSCHHHHHHHHHTCCTTCEEEEECSCGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCCHHHHHHHHcCCCCCeeEEEeeCchhhHHHHHHHHHHHHHHh
Confidence 67899999999999999999999999999999988899999999999999864 2777665 555
Q ss_pred ----CCCCeEEEEEeecccccccCCCC----CCchhhhhhhhhccCceEEEEeecCCC-CCCCCeeEEeccCceecCCCc
Q 047978 118 ----NAGARVLVVCSEITVGTFRAPSD----ENLSCLVNRAIVGDGTAALIVGACPDI-NTERPLFHIVPTAQTILPDSE 188 (320)
Q Consensus 118 ----~~~~~~LVv~~e~~s~~~~~~~~----~~~~~~~~~~~~GDgAaA~ll~~~~~~-~~~~~~~~~~~~~~~~~p~~~ 188 (320)
+..++||||++|++|+ +.++.. .+.+++.+..+|||||+|+||++++.. ....+.+++.+......|.++
T Consensus 160 ~~~~G~~~~vLvv~~E~~s~-~~~~~~~~~~~~~~d~~~~~LFGDGAaAvvl~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 238 (379)
T 3euo_A 160 HTARGKPARILVLALEVSTT-MVRSELESIDALQETRIGIALFSDCASAVILSNGIGEAPGKPAIYDLLGWENRVIPDSE 238 (379)
T ss_dssp HHHTTCCCEEEEEEEECCGG-GHHHHHHHHHHHCCCCCHHHHBCCEEEEEEEECCTTCCTTCCCSEEEEEEEEEECTTCG
T ss_pred ccccCCCCEEEEEEEEeehh-hhcCccccccccHHHhhcceeecCccEEEEEecCCCCccccccceeeeceeEEEecCch
Confidence 8899999999999997 433210 001235678999999999999987643 122345677766566678776
Q ss_pred ccccccccccc-----------eechhHHHHHHHHhhh-------cCCCCCCCCceEEEEcCCChhHHHHHHHHcCCCcc
Q 047978 189 DAIKGHFRESP-----------LIADNIDKFLAESFDQ-------VSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKT 250 (320)
Q Consensus 189 ~~~~~~~~~~g-----------~~~~~~~~~i~~~l~~-------~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e 250 (320)
+.+.|.+...| ++.+.++++++++|++ +|++++|+ .|++||+|+++++.++++||+|++
T Consensus 239 ~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~~~~l~~~gl~~~di---d~~~Hq~n~~il~~v~~~Lgl~~e 315 (379)
T 3euo_A 239 HDLGFDVDPMGWKVVLSPRVPVLAKASLQPTYADLLSSLQDQLPSSYQKPADF---DWAMHPGGATILSGAESAMGLTPE 315 (379)
T ss_dssp GGEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHHGGGSCTTSCSGGGS---EEEECCSSHHHHHHHHHHHTCCGG
T ss_pred hhcCceecCCCcEEEeChHHHHHHHHHHHHHHHHHHHhcCcccccccCChhHe---eEEeCCCChHHHHHHHHHhCCCHH
Confidence 55544433333 3456788889999886 47888886 355999999999999999999999
Q ss_pred hhhhhHHHHhccCCcccchHHHHHHHHHHhchhcC--CCCCC-CCCceEEEEeeccchhhhheeeeec
Q 047978 251 KLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEG--KATTG-EELEWGVLLGFEAGLTVEAIVLRSI 315 (320)
Q Consensus 251 ~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g--~l~~G-~~~d~vll~~~G~G~~~~a~~l~~~ 315 (320)
|+..+++++++||||+|||+|++|++++++ | ++++| .+.|++++++||+|++|+++++||.
T Consensus 316 k~~~s~~~l~~~GNtssAsi~~~L~~~~~~----g~~~l~~Gg~~~d~vll~~fG~G~t~~~~ll~~~ 379 (379)
T 3euo_A 316 HMRASYDRYINHGNSSSATIFSVLNRLREK----DMDALAPGGKVKEYVVGCAFGPGINVEMCMLKRR 379 (379)
T ss_dssp GGHHHHHHHHHHCBCGGGHHHHHHHHHTSH----HHHTTCGGGCCCSEEEEEEEETTTEEEEEEEEEC
T ss_pred HHHHHHHHHHhcCccHHHHHHHHHHHHHhh----cccccCCCCCCCCeEEEEEECcccEeEEEEEEeC
Confidence 999988889999999999999999999987 6 67765 1128999999999999999999984
No 17
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A
Probab=100.00 E-value=1.4e-48 Score=362.92 Aligned_cols=293 Identities=15% Similarity=0.159 Sum_probs=231.7
Q ss_pred ccceEEccccccCCCcccccccHHHHHhh-----hcCCchh---HHHHHHHHHhhhcccchHHHHHHHHHHHHHHcCCCC
Q 047978 4 LGKFQETQRPQANPANCVYQTDYPDFYFR-----ITSSNHM---TELKEKFKRMYILVPKVPKLGKEAVSKAIKEWGQPI 75 (320)
Q Consensus 4 ~~~~~I~a~~~~lP~~~i~~~e~~~~~~~-----~~~~~~~---~gi~~~~r~~~~~~e~~~~la~~Aa~~aL~~ag~~~ 75 (320)
+.+++|.++|+|+|+++++|+|+.+.+.. +.+.+|+ +||.+ ||++.++++..+|+.+|+++||+++|++|
T Consensus 10 ~~~v~I~~~g~~lP~~~v~n~~l~~~~~~~~~~~~~~~~~i~~~tGi~~--R~~~~~~~~~~~La~~Aa~~al~~ag~~~ 87 (345)
T 3s21_A 10 FQNVSIAGLAHIDAPHTLTSKEINERLQPTYDRLGIKTDVLGDVAGIHA--RRLWDQDVQASDAATQAARKALIDANIGI 87 (345)
T ss_dssp CSSEEEEEEEEEECSEEEEHHHHHHHHHHHHHHHTCCCCHHHHTTCCSE--EEECSSCCCHHHHHHHHHHHHHHHHTCCG
T ss_pred ecceEEEEEEEeCCCcEEcHHHHHHHHhhcccccCCCHHHHHHhhCcee--EEECCCCCCHHHHHHHHHHHHHHHcCCCH
Confidence 35799999999999999999999887521 2355663 57777 88988899999999999999999999999
Q ss_pred CCcCEEEEEeeCC-CCCCCHHHHHHHHcCCCcc--------hhhhhhh--------hhcCCCCeEEEEEeecccccccCC
Q 047978 76 SKITHLISCSVSG-VDMPGADYQLTKLLGLKPS--------VKRVMLT--------AESNAGARVLVVCSEITVGTFRAP 138 (320)
Q Consensus 76 ~dId~li~~s~t~-~~~p~~a~~l~~~LGl~~~--------~c~~~l~--------l~~~~~~~~LVv~~e~~s~~~~~~ 138 (320)
+|||.||++|+++ +..|+.+.+|+++||+++. .|+++++ ++++..++|||+++|..+. ..++
T Consensus 88 ~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~-~~~~ 166 (345)
T 3s21_A 88 EKIGLLINTSVSRDYLEPSTASIVSGNLGVSDHCMTFDVANACLAFINGMDIAARMLERGEIDYALVVDGETANL-VYEK 166 (345)
T ss_dssp GGCCEEEECCSCCSCSSSCHHHHHHHHHTCCTTCEEEECCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCHH-HHHH
T ss_pred HHCCEEEEEeCCCCCCCChHHHHHHHHhCCCCCceEEeECCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEcccch-hhcc
Confidence 9999999999998 8899999999999999742 3877655 6789999999999999986 3222
Q ss_pred C------CC-Cc---hhhhhhhhhccCceEEEEeecCCCCCCCCeeEEeccCceecCCCcccccc---cccccc-----e
Q 047978 139 S------DE-NL---SCLVNRAIVGDGTAALIVGACPDINTERPLFHIVPTAQTILPDSEDAIKG---HFRESP-----L 200 (320)
Q Consensus 139 ~------~~-~~---~~~~~~~~~GDgAaA~ll~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~---~~~~~g-----~ 200 (320)
. ++ .. +......+|||||+|+||++++.... ...+.+......+...+.+.+ .+.++| +
T Consensus 167 ~~~~~~~~~~~~~~f~~~~~~~~~GdGA~A~vl~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~ 243 (345)
T 3s21_A 167 TLERMTSPDVTEEEFRNELAALTLGCGAAAMVMARSELVPD---APRYKGGVTRSATEWNKLCRGNLDRMVTDTRLLLIE 243 (345)
T ss_dssp HHHHHTCTTCCHHHHHHHHGGGGBCCEEEEEEEEEGGGSTT---SCEEEEEEEEECGGGTTC-----------CHHHHHH
T ss_pred ccccccCCccchhhhhhhccceeeccceeEEEEecCCCCCC---CcceeeeccccCcchhhhccccCcceEEcHHHHHHH
Confidence 1 11 11 11234689999999999998764210 112222111111111110100 255666 3
Q ss_pred echhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHHHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHHh
Q 047978 201 IADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKR 280 (320)
Q Consensus 201 ~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~ 280 (320)
..+.++++++++|+++|++++|+ ++|++||+|+++++.++++||+|+||++.+ +++||||++||+|++|++++++
T Consensus 244 ~~~~~~~~i~~~l~~~gl~~~di--d~~v~Hq~~~~i~~~~~~~lgl~~ek~~~~---l~~~GNt~sasi~~~L~~~~~~ 318 (345)
T 3s21_A 244 GIKLAQKTFVAAKQVLGWAVEEL--DQFVIHQVSRPHTAAFVKSFGIDPAKVMTI---FGEHGNIGPASVPIVLSKLKEL 318 (345)
T ss_dssp HHHHHHHHHHHHHHHHCCCGGGC--SEEEECCSCHHHHHHHHHHHTCCGGGBCCC---HHHHCBCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHC--CEEEeCCCCHHHHHHHHHHcCcCHHHceee---HhhcCchHHHHHHHHHHHHHHc
Confidence 45778899999999999999997 399999999999999999999999999874 8999999999999999999999
Q ss_pred chhcCCCCCCCCCceEEEEeeccchhhhheeeee
Q 047978 281 SVEEGKATTGEELEWGVLLGFEAGLTVEAIVLRS 314 (320)
Q Consensus 281 ~~~~g~l~~G~~~d~vll~~~G~G~~~~a~~l~~ 314 (320)
|++++| |++++++||+|++|+++++||
T Consensus 319 ----g~~~~G---d~vll~~~G~G~t~~~~~l~w 345 (345)
T 3s21_A 319 ----GRLKKG---DRIALLGIGSGLNCSMAEVVW 345 (345)
T ss_dssp ----TCCCTT---CEEEEEEEETTTEEEEEEEEC
T ss_pred ----CCCCCC---CEEEEEEEChhhhheEEEEEC
Confidence 999999 999999999999999999998
No 18
>2d3m_A Pentaketide chromone synthase; chalcone synthase, polyketide synthase, transferase; HET: COA; 1.60A {Aloe arborescens} PDB: 2d51_A 2d52_A*
Probab=100.00 E-value=7.1e-48 Score=365.57 Aligned_cols=304 Identities=47% Similarity=0.783 Sum_probs=244.3
Q ss_pred cceEEccccccCCCcccccccHHHHHhhhcC----------Cch---hHHHHHHHHHhhhcc------------------
Q 047978 5 GKFQETQRPQANPANCVYQTDYPDFYFRITS----------SNH---MTELKEKFKRMYILV------------------ 53 (320)
Q Consensus 5 ~~~~I~a~~~~lP~~~i~~~e~~~~~~~~~~----------~~~---~~gi~~~~r~~~~~~------------------ 53 (320)
.+++|.++|+|+|+++++|+++.+.+....+ .+| .+||++ ||++.++
T Consensus 28 ~~~~I~~ig~~~P~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~--R~~a~~~~~~~~~p~~~~~~~~~~~ 105 (406)
T 2d3m_A 28 GTATVMAIGTAHPPHIFPQDTYADVYFRATNSEHKVELKKKFDHICKKTMIGK--RYFNYDEEFLKKYPNITSYDEPSLN 105 (406)
T ss_dssp SCCEEEEEEEECCSEEEEGGGHHHHHHHHTTCTTCHHHHHHHHHHHHHSCCCE--EEESCCHHHHTTCTTTSSSSSSCHH
T ss_pred CCeEEEEEeecCCCCccCHHHHHHHHHHhccccchhhHHHHHHHHHhccCCcc--eEEeeChhhhccCcccccccCCChH
Confidence 3589999999999999999999987632121 122 245655 6776544
Q ss_pred -------cchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcc---------hhhhhhh---
Q 047978 54 -------PKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPS---------VKRVMLT--- 114 (320)
Q Consensus 54 -------e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~---------~c~~~l~--- 114 (320)
++..+|+++|+++||+++|++++|||+||++|++++..|+.+.+|+++||+++. .|+++++
T Consensus 106 ~r~~~~~~~~~~La~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~~v~~aC~s~~~al~ 185 (406)
T 2d3m_A 106 DRQDICVPGVPALGTEAAVKAIEEWGRPKSEITHLVFCTSCGVDMPSADFQCAKLLGLHANVNKYCIYMQGAYAGGTVMR 185 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCEESCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHH
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCCHHHHHHHHcCcCCCcceeeeEcCccHHHHHHHH
Confidence 688999999999999999999999999999999998789999999999999863 2776654
Q ss_pred -----hhcCCCCeEEEEEeecccccccCCCCCCchhhhhhhhhccCceEEEEeecCCCCCCCCeeEEeccCceecCCCcc
Q 047978 115 -----AESNAGARVLVVCSEITVGTFRAPSDENLSCLVNRAIVGDGTAALIVGACPDINTERPLFHIVPTAQTILPDSED 189 (320)
Q Consensus 115 -----l~~~~~~~~LVv~~e~~s~~~~~~~~~~~~~~~~~~~~GDgAaA~ll~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 189 (320)
++++..++|||+++|..+..+.+|.|.+++++.+..+|||||+|+||++.+..++..+.+++.+.+...+|.+.+
T Consensus 186 ~A~~~i~~g~~~~vLvvg~E~~s~~~~~~~d~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~l~~~~~~~~p~~~~ 265 (406)
T 2d3m_A 186 YAKDLAENNRGARVLVVCAELTIMMLRAPNETHLDNAIGISLFGDGAAALIIGSDPIIGVEKPMFEIVCTKQTVIPNTED 265 (406)
T ss_dssp HHHHHHHTSTTCEEEEEEEECGGGTCCCCCSTTHHHHHHHTTBCCEEEEEEEESSCCTTTCCCCEEEEEEEEEECTTCTT
T ss_pred HHHHHHHcCCCCEEEEEEEEecchheeCCcccchhhhhccceeccceEEEEEecCCCCccCCCceEEEecccEEcCCCch
Confidence 678999999999999998756677665454566789999999999999876544333346777766666676544
Q ss_pred cccccccccc-----------eechhHHHHHHHHhhhcCCCCCCCC--ceEEEEcCCChhHHHHHHHHcCCCcchhhhhH
Q 047978 190 AIKGHFRESP-----------LIADNIDKFLAESFDQVSLNDHDWN--SLFWMMHPIGPAVLDQIEGKLGLEKTKLRETR 256 (320)
Q Consensus 190 ~~~~~~~~~g-----------~~~~~~~~~i~~~l~~~g~~~~d~~--~~~~i~h~~~~~~~~~~~~~lg~~~e~~~~~~ 256 (320)
.+.|.+.++| +..+.++++++++|+++|++++ +| +++|++||+|.++++.+++.||+|++|+..++
T Consensus 266 ~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~agl~~~-id~~di~~v~Hq~~~~i~~~~~~~lgl~~~k~~~s~ 344 (406)
T 2d3m_A 266 VIHLHLRETGMMFYLSKGSPMTISNNVEACLIDVFKSVGITPP-EDWNSLFWIPHPGGRAILDQVEAKLKLRPEKFRAAR 344 (406)
T ss_dssp TEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHTTTCCCC-SSGGGSEEEECCSCHHHHHHHHHHTTCCTTTTHHHH
T ss_pred hcceeeccCceEEEeCchHHHHHHHHHHHHHHHHHHhcCCCCC-CCccceEEEECCCCHHHHHHHHHHcCCCHHHHHHHH
Confidence 3333322222 2346778899999999999987 63 12499999999999999999999999999877
Q ss_pred HHHhccCCcccchHHHHHHHHHHhchhcCCCCCC-----CCCceEEEEeeccchhhhheeeeecc
Q 047978 257 HVLSEYGNMASATVLFVLDEMRKRSVEEGKATTG-----EELEWGVLLGFEAGLTVEAIVLRSIP 316 (320)
Q Consensus 257 ~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G-----~~~d~vll~~~G~G~~~~a~~l~~~~ 316 (320)
+++++||||++||+|++|++++++ |+ ++| +|.|++++++||+|++|++++|||.|
T Consensus 345 ~~l~~~GNt~sAsi~~~L~~~~~~----g~-~~G~~~~g~~~d~vll~~fG~G~t~~~~ll~~~~ 404 (406)
T 2d3m_A 345 TVLWDYGNMVSASVGYILDEMRRK----SA-AKGLETYGEGLEWGVLLGFGPGITVETILLHSLP 404 (406)
T ss_dssp HHHHHHCBCGGGHHHHHHHHHHHH----HH-HTTCSBTTTTCSEEEEEEEETTTEEEEEEEEECB
T ss_pred HHHHHcCCchhhHHHHHHHHHHHh----cc-ccCCCccCCCcceEEEEEeccchhhhhHHhhhcc
Confidence 789999999999999999999998 65 555 44489999999999999999999986
No 19
>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris}
Probab=100.00 E-value=1.5e-48 Score=367.59 Aligned_cols=287 Identities=17% Similarity=0.245 Sum_probs=228.7
Q ss_pred ccceEEccccccCCCcccccccHHHHHhh----------------------hcCCchh---HHHHHHHHHhhhccc----
Q 047978 4 LGKFQETQRPQANPANCVYQTDYPDFYFR----------------------ITSSNHM---TELKEKFKRMYILVP---- 54 (320)
Q Consensus 4 ~~~~~I~a~~~~lP~~~i~~~e~~~~~~~----------------------~~~~~~~---~gi~~~~r~~~~~~e---- 54 (320)
+.+++|.++|+|+|+++++|+|+.+.+.. ..+++|+ +||++ ||++.+++
T Consensus 22 ~~~~~I~gig~~~P~~~v~n~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~I~~~tGI~~--R~~a~~~~~~~~ 99 (392)
T 3led_A 22 VRPAVIAATGLYTPPDSVSNAELVEAFNTYVANFNAANKARIEAGEIEPLQPSSSEFIEKASGIKS--RYVVAKPGIVDP 99 (392)
T ss_dssp CCCEEEEEEEEECCSEEEEHHHHHHHHHHHHHHHHHHTHHHHHTTSSCCCCCCCHHHHHHHHCCCE--EEESCCGGGGCT
T ss_pred cCceEEEEEEEeCCCceEcHHHHHHHHhhhhcccccccchhhhcccccccCCCcHHHHHHccCCce--EEEecCcccccc
Confidence 35689999999999999999999875411 1134553 67777 78876532
Q ss_pred ----------------chHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCC-CCCCCHHHHHHHHcCCCc------chhhh
Q 047978 55 ----------------KVPKLGKEAVSKAIKEWGQPISKITHLISCSVSG-VDMPGADYQLTKLLGLKP------SVKRV 111 (320)
Q Consensus 55 ----------------~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~-~~~p~~a~~l~~~LGl~~------~~c~~ 111 (320)
++.+|+++|+++||+++|++|+|||+||++|+++ +..|+.+.+|+++||++. ..|++
T Consensus 100 ~~~~~~~~~r~~~~~~~~~~La~~Aa~~AL~~agi~~~dId~vi~~t~t~~~~~p~~a~~v~~~LGl~~~~~dv~~aC~g 179 (392)
T 3led_A 100 DVMRPIIPERSNDELSILAEMAVTAAEQAIERWGKPRERIGAVLCACSNMQRAYPAMAIEVQNALGLGGFAFDMNVACSS 179 (392)
T ss_dssp TTCSCCCCCCCTTSCCHHHHHHHHHHHHHHHHHCSCGGGEEEEEEESSCCSCSBSCHHHHHHHHTTCCSEEEEEECGGGH
T ss_pred cccccccccchhcccccHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCccHHHHHHHHHhCCCCeEEEECCccHH
Confidence 4689999999999999999999999999999999 889999999999999953 24888
Q ss_pred hhh--------hhcCCCCeEEEEEeecccccccCCCCCCchhhhhhhhhccCceEEEEeecCCCCCCCCeeEE-----ec
Q 047978 112 MLT--------AESNAGARVLVVCSEITVGTFRAPSDENLSCLVNRAIVGDGTAALIVGACPDINTERPLFHI-----VP 178 (320)
Q Consensus 112 ~l~--------l~~~~~~~~LVv~~e~~s~~~~~~~~~~~~~~~~~~~~GDgAaA~ll~~~~~~~~~~~~~~~-----~~ 178 (320)
+++ ++++..++||||++|.+|+ +.++.|+ .+..+|||||+|+||++++... +.+.+ .+
T Consensus 180 ~~~aL~~A~~~i~~g~~~~vLvvg~E~~S~-~~d~~dr-----~t~~lFGDGA~A~vl~~~~~~~---~~~~i~~~~~~s 250 (392)
T 3led_A 180 ATFGLKTAADFVGGGSVDAVLMVNPEICSG-HLNFRDR-----DSHFIFGDVATAAIVERADDAQ---GGWSILGTKLKT 250 (392)
T ss_dssp HHHHHHHHHHHHHTTSCSEEEEEEEEEGGG-GCCTTCT-----TTTTTBCEEEEEEEEEEGGGCC---SSEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHCCCCCEEEEEeehhcCC-cCCcCcc-----cCCcccccccEEEEEEecCCCC---CCCeEEEEEEEE
Confidence 765 6789999999999999997 6666653 3578999999999999876421 01222 22
Q ss_pred cCce-e-cC------CCcccc---cccccccc-----eechhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHHHH
Q 047978 179 TAQT-I-LP------DSEDAI---KGHFRESP-----LIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIE 242 (320)
Q Consensus 179 ~~~~-~-~p------~~~~~~---~~~~~~~g-----~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~ 242 (320)
.+.. . .+ ..++.+ ..+++++| ++.+.+++.++++|+++|++++|| ++|++||+|.++++.++
T Consensus 251 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~v~~~a~~~~~~~i~~~L~~~gl~~~dI--d~~v~Hqan~~i~~~~~ 328 (392)
T 3led_A 251 QFSNNIRNNAGFLNRAWPEGRDKADKLFVQQGRKVFKEVVPLVSEMIIEHAREIGIDPHGL--KRMWLHQANINMNEIIG 328 (392)
T ss_dssp CCCSSEEBCCSGGGGGSGGGTTSGGGSCEECHHHHHHHHHHHHHHHHHHHHHHTTCCGGGC--SEEEECSSCHHHHHHHH
T ss_pred ccccccccCCCcccCCCccccccccceEEechHHHHHHHHHHHHHHHHHHHHHcCCCHHHC--cEEEEcCCCHHHHHHHH
Confidence 2111 0 11 111111 22466777 456788899999999999999997 39999999999999999
Q ss_pred HHc-C--CCcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCCCCCCceEEEEeeccchhhhheeeeec
Q 047978 243 GKL-G--LEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEAIVLRSI 315 (320)
Q Consensus 243 ~~l-g--~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~~l~~~ 315 (320)
+++ | +|.+|++. ++++||||+|||+|++|+++ . +++++| |++++++||+|++|+++++||.
T Consensus 329 ~~llgl~~~~~k~~~---~l~~~GNtssAsipl~L~~~--~----~~~~~G---d~vll~gfG~G~t~~~~ll~~~ 392 (392)
T 3led_A 329 RKVLGRDPTRDENVI---ILDDYANTSSAGSIIAFHKH--Q----DDMAQG---DLGLICSFGAGYSAGTVFVQKR 392 (392)
T ss_dssp HHHHTSCCCTTTBCC---CHHHHCBCGGGHHHHHHHHC--C----TTCCTT---CEEEEEEEETTTEEEEEEEEEC
T ss_pred HHhcCCCCCHHHHHH---HHhhhCccHHHHHHHHHHHH--h----CCCCCC---CEEEEEEEChhhEeEEEEEEEC
Confidence 996 6 67889877 49999999999999999985 4 789999 9999999999999999999984
No 20
>3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa}
Probab=100.00 E-value=2.2e-47 Score=365.46 Aligned_cols=303 Identities=21% Similarity=0.251 Sum_probs=234.0
Q ss_pred ceEEccccccCCCcccccccHHHHHhhhcC----Cch------hHHHHHHHHHhhhcc---------------------c
Q 047978 6 KFQETQRPQANPANCVYQTDYPDFYFRITS----SNH------MTELKEKFKRMYILV---------------------P 54 (320)
Q Consensus 6 ~~~I~a~~~~lP~~~i~~~e~~~~~~~~~~----~~~------~~gi~~~~r~~~~~~---------------------e 54 (320)
+++|.++|+|+|+++++|+|+.+....... .++ .+||++ ||++.++ +
T Consensus 31 ~v~I~gigt~lP~~~v~n~el~~~~~~~~~~~~~~~~~~~i~~~tGI~~--R~~~~~~~~p~~~~~~~ps~~~r~~~~~~ 108 (465)
T 3e1h_A 31 GLSITGLGVQYPPYSLGPDAIDILSKRYHPESPAMKKVLAINRYTGIDQ--RSSIGNPDHPLVNKPNPPTVKELHEVFMS 108 (465)
T ss_dssp CEEEEEEEEECCSSCCBCTHHHHHTCSSSCCCHHHHHHHHHTTTSCCCC--BCCSSCTTCGGGSSSSCCCHHHHHHHHHH
T ss_pred CEEEEEEEEECCCcEEcHHHHHHHHHHhcccchhHHHHHHHHHhcCCce--EEEeecccCcccccccCCCHHHHHHHHHh
Confidence 589999999999999999999765411111 122 246665 6776332 3
Q ss_pred chHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcc---------hhhhhhh--------hhc
Q 047978 55 KVPKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPS---------VKRVMLT--------AES 117 (320)
Q Consensus 55 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~---------~c~~~l~--------l~~ 117 (320)
++.+|+++|+++||+++|++++|||+||++|++.+..|+.+.+|+++||+++. .|+++++ +++
T Consensus 109 ~a~~La~~Aa~~AL~~agi~~~dId~li~~t~t~~~~P~~a~~v~~~LGl~~~~~~~dv~~~~Csgg~~AL~~A~~~i~a 188 (465)
T 3e1h_A 109 DGVPLAVEASRKAMAEARLVPAQITHMVSTTCTDSANPGYDHYVAKELGLSDRLEKVLLHGIGCSGGLAALRTAANLCLG 188 (465)
T ss_dssp HTHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCCCSSCHHHHHHHHHTCCTTCEEEEECSCGGGHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCCCCCCcHHHHHHHHhCCCCCeeEEEecCCcchHHHHHHHHHHHHHhc
Confidence 45799999999999999999999999999999988899999999999999864 3777765 554
Q ss_pred ----CCCCeEEEEEeecccccccCCCC----CCchhhhhhhhhccCceEEEEeecCCC-CCCCCeeEEeccCceecCCCc
Q 047978 118 ----NAGARVLVVCSEITVGTFRAPSD----ENLSCLVNRAIVGDGTAALIVGACPDI-NTERPLFHIVPTAQTILPDSE 188 (320)
Q Consensus 118 ----~~~~~~LVv~~e~~s~~~~~~~~----~~~~~~~~~~~~GDgAaA~ll~~~~~~-~~~~~~~~~~~~~~~~~p~~~ 188 (320)
+..++||||++|++|. +.++.. .+.+++.+..+|||||+|+||++++.. +...+.+++.+......|.+.
T Consensus 189 ~~~~G~~~~vLVvg~E~~S~-~~~~~~~~~~~~~~d~~t~~LFGDGAaAvVl~~~~~~~~~~~~~~~l~~~~~~~~p~~~ 267 (465)
T 3e1h_A 189 HTARGKPARILVLALEVSTT-MVRSELESIDALQETRIGIALFSDCASAVILSNGIGEAPGKPAIYDLLGWENRVIPDSE 267 (465)
T ss_dssp HHHTTCCCEEEEEEEECCGG-GHHHHHHHHHHHTCCCCHHHHBCCEEEEEEEECCTTCCTTCCCSEEEEEEEEEECTTCT
T ss_pred ccccCCCCEEEEEEEeecch-hcCcccccccccccccccccccccceeEEEEEccCCCccccccceeeccceEEEecCCc
Confidence 8899999999999997 443210 001235678999999999999987542 223345677665555677765
Q ss_pred ccccccccccc-----------eechhHHHHHHHHhhh-------cCCCCCCCCceEEEEcCCChhHHHHHHHHcCCCcc
Q 047978 189 DAIKGHFRESP-----------LIADNIDKFLAESFDQ-------VSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKT 250 (320)
Q Consensus 189 ~~~~~~~~~~g-----------~~~~~~~~~i~~~l~~-------~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e 250 (320)
+.+.|.+.+.| ++.+.++++++++|++ +|++++|+ .|++||+|++|++.++++||+|++
T Consensus 268 ~~~~~~~~~~g~~~~~g~~V~~~a~~~v~~~i~~~L~~~g~~L~~agl~~~DI---d~~~Hqan~rIl~~v~~~Lgl~~e 344 (465)
T 3e1h_A 268 HDLGFDVDPMGWKVVLSPRVPVLAKASLQPTYADLLSSLQDQLPSSYQKPADF---DWAMHPGGATILSGAESAMGLTPE 344 (465)
T ss_dssp TTEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHHGGGSCTTSCSGGGS---EEEECCSSHHHHHHHHHHHTCCGG
T ss_pred cccCccccCCCceEecChHHHHHHHHHHHHHHHHHHHhccccccccCCCHHHc---eEEecCCChHHHHHHHHHhCcCHH
Confidence 54433333322 4467788889999887 56888886 345999999999999999999999
Q ss_pred hhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCCC-CCCceEEEEeeccchhhhheeeeecc
Q 047978 251 KLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTG-EELEWGVLLGFEAGLTVEAIVLRSIP 316 (320)
Q Consensus 251 ~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G-~~~d~vll~~~G~G~~~~a~~l~~~~ 316 (320)
|+..+++++++||||+|||+|++|++++++.. |++++| ...|++++++||+|++|+++++||..
T Consensus 345 k~~~s~~~l~~yGNtsSASip~aL~~~~~~~~--g~l~~Gg~~~d~vll~gfG~Glt~~~~llr~~~ 409 (465)
T 3e1h_A 345 HMRASYDRYINHGNSSSATIFSVLNRLREKDM--DALAPGGKVKEYVVGCAFGPGINVEMCMLKRRM 409 (465)
T ss_dssp GGHHHHHHHHHHCBCGGGHHHHHHHHHTSTTT--TSCSSSSCCCSEEEEEEEETTTEEEEEEEEECC
T ss_pred HhHHHHHHHhcceechHhHHHHHHHHHHHhcc--cccCCCCCCCCEEEEEEEhHHHhhhheeeEEec
Confidence 99988889999999999999999999987611 357665 11289999999999999999999974
No 21
>3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor}
Probab=100.00 E-value=3.7e-46 Score=352.49 Aligned_cols=276 Identities=21% Similarity=0.227 Sum_probs=225.8
Q ss_pred CCCcccccccHHHHHhhhcCCch---hHHHHHHHHHhhhcccchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCC
Q 047978 16 NPANCVYQTDYPDFYFRITSSNH---MTELKEKFKRMYILVPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMP 92 (320)
Q Consensus 16 lP~~~i~~~e~~~~~~~~~~~~~---~~gi~~~~r~~~~~~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p 92 (320)
+|...++|+++.+.+ + +.+| .++|.+ |+++. .++..+|+++|+++||+++|++++|||+||++|++++..|
T Consensus 100 ~~~~~~~n~~l~~~~--~-~~e~i~~rtgi~~--R~~~~-~~~~~~La~~Aa~~AL~~agi~~~dId~li~~t~t~~~~P 173 (413)
T 3v7i_A 100 LVRDGFTEQDANRAI--A-ALKAVPASQTVQE--RTAPA-WEAVQAYGERAARGALQIAGLDVADVDCLITSNSTTPALP 173 (413)
T ss_dssp C------CHHHHHHH--H-HHHTSCCCCCHHH--HHHHH-HHHHHHHHHHHHHHHHHHHTCCGGGCCEEEEECCSSCCSS
T ss_pred ccccccchhhhhhhc--C-cccceecCCCHHH--hCccc-ccCHHHHHHHHHHHHHHHhCcCHHHCCEEEEEccCCCCcC
Confidence 455568899999887 4 5667 478888 66664 3689999999999999999999999999999999998899
Q ss_pred CHHHHHHHHcCCCcc---------hhhhhhh--------hhcCCCCeEEEEEeecccccccCCCCCCchhhhhhhhhccC
Q 047978 93 GADYQLTKLLGLKPS---------VKRVMLT--------AESNAGARVLVVCSEITVGTFRAPSDENLSCLVNRAIVGDG 155 (320)
Q Consensus 93 ~~a~~l~~~LGl~~~---------~c~~~l~--------l~~~~~~~~LVv~~e~~s~~~~~~~~~~~~~~~~~~~~GDg 155 (320)
+.+.+|+++||+++. .|+++++ +++++.++||||++|.+|. +.+|.|++.++++...+||||
T Consensus 174 ~~a~~v~~~LGl~~~~~~~~v~~~~Cagg~~AL~~A~~~i~ag~~~~vLvvg~E~~S~-~~~~~d~~~~~lv~~~LFGDG 252 (413)
T 3v7i_A 174 GLDVALANRLPLRGDTMLLPATQWACVAGTRSLALAADLVAADPDRVVLVVISEALST-TYQPADDTLESLIVRLLFADT 252 (413)
T ss_dssp CHHHHHHHHTTCCTTCEEEEESSCGGGHHHHHHHHHHHHHHHCTTCEEEEEEEECGGG-GCCSSCCSTTHHHHHHHBCCE
T ss_pred HHHHHHHHHhCCCCCceEEEeeCCccHHHHHHHHHHHHHHhcCCCCEEEEEEEecccc-ccCccccchhhhhcceeeccc
Confidence 999999999999873 3777665 6789999999999999997 556777666667778999999
Q ss_pred ceEEEEeecCCCCCCCCeeEEeccCceecCCCccccccc-------ccccc---eechhHHHHHHHHhh------hcCCC
Q 047978 156 TAALIVGACPDINTERPLFHIVPTAQTILPDSEDAIKGH-------FRESP---LIADNIDKFLAESFD------QVSLN 219 (320)
Q Consensus 156 AaA~ll~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-------~~~~g---~~~~~~~~~i~~~l~------~~g~~ 219 (320)
|+|+||++++..+ +.+++.+.+...+|++.+.+.|. +.+++ ...+.++++++++|+ ++|++
T Consensus 253 AaAvvl~~~~~~~---~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~m~~~v~~~v~~~~~~i~~~L~~~~~~~~~gl~ 329 (413)
T 3v7i_A 253 AVAAVVTGRPRPE---SVLRLDAAWHHTLPGTRDLHRLETRADGTHFVMDRRGPRAVQETVTAMWEWLRVRYEDDPSSWH 329 (413)
T ss_dssp EEEEEEESSCCTT---EEEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHTSSSCTTCC
T ss_pred cEEEEEEecCCCC---CCEEEEccccEEeCCCccccCccccCCceEEEECcHHHHHHHHHHHHHHHHHhhccccccCCCc
Confidence 9999999876421 35677665556678765544433 33333 234457888999999 88888
Q ss_pred CCCCCceEEEEcCCChhHHHHHHHHcC--CCcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCCCCCCceEE
Q 047978 220 DHDWNSLFWMMHPIGPAVLDQIEGKLG--LEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGV 297 (320)
Q Consensus 220 ~~d~~~~~~i~h~~~~~~~~~~~~~lg--~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vl 297 (320)
+ ++|++||+|+++++.++++|| +|+||+..++.+++ ||||+|||+|++|++++ + +++++| |+++
T Consensus 330 ---i--d~~v~Hq~~~~il~~v~~~Lg~~l~~ek~~~s~~~l~-~GNtssAsi~~~L~~~~-~----~~~~~G---d~vl 395 (413)
T 3v7i_A 330 ---P--DVLLAHPGGTRVLEYMEQTMPDEWPSGLLSYSRDSYT-SGNRGGAAVFDILRRAH-D----AGQKTG---SRAV 395 (413)
T ss_dssp ---C--CEEEEECSSHHHHHHHHHHSCSSCCSCSTHHHHHHHT-TCBCGGGHHHHHHHHHH-H----HCCCTT---CEEE
T ss_pred ---e--eEEEECCCChHHHHHHHHHhCCCCCHHHhhccceEec-eeChHHHHHHHHHHHHH-h----CCCCCC---CEEE
Confidence 3 389999999999999999999 99999977677899 99999999999999999 5 789999 9999
Q ss_pred EEeeccchhhhheeeeec
Q 047978 298 LLGFEAGLTVEAIVLRSI 315 (320)
Q Consensus 298 l~~~G~G~~~~a~~l~~~ 315 (320)
+++||+|++|+++++||.
T Consensus 396 l~~fG~Glt~~~~ll~w~ 413 (413)
T 3v7i_A 396 LYAAAPGLTATALEGEWL 413 (413)
T ss_dssp EEEEETTTEEEEEEEEEC
T ss_pred EEEECHHHhHhhhheEeC
Confidence 999999999999999983
No 22
>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum}
Probab=100.00 E-value=3.2e-45 Score=343.99 Aligned_cols=294 Identities=28% Similarity=0.488 Sum_probs=237.0
Q ss_pred cceEEccccccCCCcccccccHHHHHhhhcCCc-----h------hHHHHHHHHHhhhcc--------------------
Q 047978 5 GKFQETQRPQANPANCVYQTDYPDFYFRITSSN-----H------MTELKEKFKRMYILV-------------------- 53 (320)
Q Consensus 5 ~~~~I~a~~~~lP~~~i~~~e~~~~~~~~~~~~-----~------~~gi~~~~r~~~~~~-------------------- 53 (320)
.+++|.++|+|+|+++++|+++.+.+....+.+ | .+||++ ||++.++
T Consensus 12 ~~v~I~g~g~~~P~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~--R~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (374)
T 2h84_A 12 NNSFVLGIGISVPGEPISQQSLKDSISNDFSDKAETNEKVKRIFEQSQIKT--RHLVRDYTKPENSIKFRHLETITDVNN 89 (374)
T ss_dssp CCCEEEEEEEECSSSCEEHHHHHHHHHHHSCSCHHHHHHHHHHHHTTCCCE--ECCSSCTTSGGGCGGGGGGCCHHHHHH
T ss_pred CCeEEEEEEEeCCCcccCHHHHHHHHHHhhccChHHHHHHHHHHHhCCcCc--ceeecCccccccccccCChHHHHHHHH
Confidence 368999999999999999999998763222111 2 245555 6777555
Q ss_pred ---cchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcc---------hhhhhhh-------
Q 047978 54 ---PKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPS---------VKRVMLT------- 114 (320)
Q Consensus 54 ---e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~---------~c~~~l~------- 114 (320)
++..+|+++|+++||+++|++++|||.||++|++++..|+.+.+|+.+||+++. .|+++++
T Consensus 90 ~~~~~~~~la~~Aa~~al~~ag~~~~~id~vi~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~aCss~~~al~~A~~ 169 (374)
T 2h84_A 90 QFKKVVPDLAQQACLRALKDWGGDKGDITHIVSVTSTGIIIPDVNFKLIDLLGLNKDVERVSLNLMGCLAGLSSLRTAAS 169 (374)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCCSSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCCCCCCcHHHHHHHHcCcCCCCceEEecCCcCHHHHHHHHHHHH
Confidence 788999999999999999999999999999999997789999999999999852 4777655
Q ss_pred -hhcCCCCeEEEEEeecccccccCCCCCCchhhhhhhhhccCceEEEEeecCCCCCCCCeeEEeccCceecCCCcccccc
Q 047978 115 -AESNAGARVLVVCSEITVGTFRAPSDENLSCLVNRAIVGDGTAALIVGACPDINTERPLFHIVPTAQTILPDSEDAIKG 193 (320)
Q Consensus 115 -l~~~~~~~~LVv~~e~~s~~~~~~~~~~~~~~~~~~~~GDgAaA~ll~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 193 (320)
++++..++|||+++|..++.+.+|.+ ++...+..+|||||+|+||++.+... ..+.+++.+.+....|++.+.+.+
T Consensus 170 ~i~~g~~~~vLv~g~e~~s~~~~~~~d--r~~~~~~~lfGDGA~A~vL~~~~~~~-~~~~~~l~~~g~~~~~~~~~~~~~ 246 (374)
T 2h84_A 170 LAKASPRNRILVVCTEVCSLHFSNTDG--GDQMVASSIFADGSAAYIIGCNPRIE-ETPLYEVMCSINRSFPNTENAMVW 246 (374)
T ss_dssp HHTTCTTCEEEEEEEECCGGGCCCSSS--HHHHHHHHHBCCEEEEEEEESSCCTT-CCCCEEEEEEEEEECSSCTTSEEE
T ss_pred HHHcCCCCEEEEEEEEecchhhcCCCC--HHHHhhhhhhccCcEEEEEecCCCcc-cCCceeEEeeeeEEeCCCccccee
Confidence 77899999999999999874445644 23335689999999999999876421 112456766666666665443333
Q ss_pred cccccc-----------eechhHHHHHHHHhhhcC------CCCCCCCceEEEEcCCChhHHHHHHHHcCCCcchhhhhH
Q 047978 194 HFRESP-----------LIADNIDKFLAESFDQVS------LNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKTKLRETR 256 (320)
Q Consensus 194 ~~~~~g-----------~~~~~~~~~i~~~l~~~g------~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e~~~~~~ 256 (320)
.+.++| +..+.++++++++|+++| ++++|+ ++| +||.|.++++.+++.||++++|+..++
T Consensus 247 ~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~ag~~~~~~l~~~di--d~~-~H~~~~~i~d~~~~~lgl~~~k~~~s~ 323 (374)
T 2h84_A 247 DLEKEGWNLGLDASIPIVIGSGIEAFVDTLLDKAKLQTSTAISAKDC--EFL-IHTGGKSILMNIENSLGIDPKQTKNTW 323 (374)
T ss_dssp EEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHHTTTSCSCCCSSSS--EEE-ECCCCHHHHHHHHHHTTCCGGGGHHHH
T ss_pred EEecCcEEEEeCchHHHHHHHHHHHHHHHHHHhcCCccccCCChhhc--CEe-ECCCCHHHHHHHHHHcCCCHHHHHHHH
Confidence 333333 123567788999999999 999997 488 999999999999999999999998666
Q ss_pred HHHhccCCcccchHHHHHHHHHHhchhcCCCCCCCCCceEEEEeeccchhhhheeeeec
Q 047978 257 HVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEAIVLRSI 315 (320)
Q Consensus 257 ~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~~l~~~ 315 (320)
.++++||||++||+|++|++++++ ++ +| |++++++||+|++|++++|||.
T Consensus 324 ~~~~~~Gnt~sasi~~~L~~~~~~----~~--~G---d~vll~~~G~G~t~~~~ll~~~ 373 (374)
T 2h84_A 324 DVYHAYGNMSSASVIFVMDHARKS----KS--LP---TYSISLAFGPGLAFEGCFLKNV 373 (374)
T ss_dssp HHHHHHCBCTTHHHHHHHHHHHTC----SC--CC---SEEEEEEEETTTEEEEEEEEEC
T ss_pred HHHHHhCCchhhHHHHHHHHHHhh----cC--CC---CeEEEEEeccchhhhhhhheec
Confidence 689999999999999999999998 76 78 9999999999999999999985
No 23
>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B*
Probab=100.00 E-value=3.8e-46 Score=347.72 Aligned_cols=289 Identities=12% Similarity=0.059 Sum_probs=222.2
Q ss_pred ccceEEccccccCCCcccccccHHHHHhhhcCCch-hHHHHHHHHHhhhccc--chHHHHHHHHHHHHHHcCCCCCCcCE
Q 047978 4 LGKFQETQRPQANPANCVYQTDYPDFYFRITSSNH-MTELKEKFKRMYILVP--KVPKLGKEAVSKAIKEWGQPISKITH 80 (320)
Q Consensus 4 ~~~~~I~a~~~~lP~~~i~~~e~~~~~~~~~~~~~-~~gi~~~~r~~~~~~e--~~~~la~~Aa~~aL~~ag~~~~dId~ 80 (320)
+++++|.++|.|+|+++++|+++.+.. ..+.++ .+||.+ ||++.++| ++.+|+++|+++||+++|++|+|||+
T Consensus 3 ~~~v~I~g~g~ylP~~~~~~~~~~~~~--~~~~~~~~tGi~~--r~~a~~~e~~~~~~La~~Aa~~aL~~ag~~~~dId~ 78 (357)
T 3s3l_A 3 WENLFVSGVAAWLPPLSTAQDAVMAGL--LDPARSKLRGIES--VTVASDAEEDAPPRMAARAARAALGRGDVDPADVSL 78 (357)
T ss_dssp CSSCEEEEEEEECCCEEEHHHHHHTTS--SCHHHHHHHCCCE--EECCCSSGGGSHHHHHHHHHHHHHHHTTCCGGGEEE
T ss_pred cCceEEEEEEEECCCCCCHHHHHHhcC--CcHHHHHHcCceE--EEecCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCE
Confidence 567999999999999888887665432 111222 467776 88886666 99999999999999999999999999
Q ss_pred EEEEeeCC--CCCCCHHHHHHHHcCCCcc-------hhhhhhh--------hhcCCCC--eEEEEEeecccc-cccCCCC
Q 047978 81 LISCSVSG--VDMPGADYQLTKLLGLKPS-------VKRVMLT--------AESNAGA--RVLVVCSEITVG-TFRAPSD 140 (320)
Q Consensus 81 li~~s~t~--~~~p~~a~~l~~~LGl~~~-------~c~~~l~--------l~~~~~~--~~LVv~~e~~s~-~~~~~~~ 140 (320)
||++|++. ...++.+.+|+++||+++. .|+++++ ++++..+ +||||++|..|. .+.++++
T Consensus 79 vi~~t~~~~~~d~~~~a~~v~~~lG~~~~~~~~v~~aC~~~~~al~~A~~~i~sg~~~~~~vLvvg~e~~s~~~~~~~~~ 158 (357)
T 3s3l_A 79 VLHSSLWFQGIDLWPAASYVAHEAVGRHVPAFGLAQRCNGGMGAIELAGAYLGSGIGAGHAALLTTGDRFAGPRIDRWNS 158 (357)
T ss_dssp EEEECSSCCSSSSSCHHHHHHHHHTCSSSCEEEEECGGGHHHHHHHHHHHHHHTTSSSSSEEEEEEEECCCTTTCCTTTS
T ss_pred EEEEeccCCCcccccHHHHHHHHhCCCCCcEEEEcCccHHHHHHHHHHHHHHHcCCCCCCEEEEEEEecccccccccccc
Confidence 99999852 2234679999999999753 3887765 6788888 999999999994 2323433
Q ss_pred CCchhhhhhhhhccCceEEEEeecCCC-CCCCCeeEEeccCce--e-------cCCCc---ccccc-----cccccc---
Q 047978 141 ENLSCLVNRAIVGDGTAALIVGACPDI-NTERPLFHIVPTAQT--I-------LPDSE---DAIKG-----HFRESP--- 199 (320)
Q Consensus 141 ~~~~~~~~~~~~GDgAaA~ll~~~~~~-~~~~~~~~~~~~~~~--~-------~p~~~---~~~~~-----~~~~~g--- 199 (320)
+ +..+|||||+|+||++++.. ++. .+.+.+.+.. . .|... ..+.+ +..+.|
T Consensus 159 ~------~~~lfGDGA~A~vl~~~~~~~~i~--~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~ 230 (357)
T 3s3l_A 159 V------DVTMYGDGAAALVLSTRDGFARVL--STATGVDNSLEILARGDEPFAPHPVEPSPVADLGTRTVRGAELADLP 230 (357)
T ss_dssp S------SSCCBCCEEEEEEEESSCCSEEEE--EEEEEECGGGGGGGTTTCCCCSSCCSSCCCCCHHHHHHHHHHHHCCT
T ss_pred c------CCcccccccEEEEEecCCCCCeEE--EEEEEEccChhhhcccCCCCCCCccCcCCccccccchhhhhcccchh
Confidence 1 47899999999999987653 211 1233333321 1 11100 01110 111111
Q ss_pred ----eechhHHHHHHHHhhhcCCCCCCCCceEEE-EcCCChhHHHHHHHHcCCCcchhhhhHHHHhccCCcccchHHHHH
Q 047978 200 ----LIADNIDKFLAESFDQVSLNDHDWNSLFWM-MHPIGPAVLDQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVL 274 (320)
Q Consensus 200 ----~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i-~h~~~~~~~~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L 274 (320)
++.+.++++++++|+++|++++|| ++|+ +||+|.+ ++.++++||+|+||+..+ +..+||||++||+|++|
T Consensus 231 ~~~~~~~~~~~~~i~~~L~~~gl~~~di--d~~v~~hq~~~~-~~~~~~~lgl~~ek~~~~--~~~~~GNt~aAsipl~L 305 (357)
T 3s3l_A 231 DLTHRYIDLLVAAKTQALEDAGTAIEDI--AHAVIPVSRRGT-GHELHDLLGLPDERTSWA--YGRTTGHVGAGDQYAGL 305 (357)
T ss_dssp THHHHHHHHHHHHHHHHHHHTTCCGGGC--SEEECCSCCCCS-SCCHHHHHTSCGGGBTHH--HHHHHCBCTTCHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHcCCCHHHC--CEEEecCcChHH-HHHHHHHcCCCHHHhHHH--hccccccchHhHHHHHH
Confidence 234678999999999999999997 3888 4999999 999999999999999875 56789999999999999
Q ss_pred HHHHHhchhcCCCCCCCCCceEEEEeeccchhhhheeeeecc
Q 047978 275 DEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEAIVLRSIP 316 (320)
Q Consensus 275 ~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~~l~~~~ 316 (320)
++++++ |++++| |+++|++||+|++|+++++||..
T Consensus 306 ~~~~~~----g~l~~G---d~vll~~fG~G~t~~a~ll~~~~ 340 (357)
T 3s3l_A 306 AHLVEN----ALVQPG---DRVLLFGGGAGYTCTAAVVEILR 340 (357)
T ss_dssp HHHHHT----TCCCTT---CEEEEECCBTTTEEEEEEEEECC
T ss_pred HHHHHc----CCCCCC---CEEEEEEEchhhhheeeeEEecc
Confidence 999999 999999 99999999999999999999974
No 24
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A
Probab=100.00 E-value=5.6e-45 Score=344.39 Aligned_cols=298 Identities=23% Similarity=0.349 Sum_probs=235.3
Q ss_pred ceEEccccccCCCcccccccHHHHHhhhcC-------Cch---hHHHHHHHHHh-hhc----------------------
Q 047978 6 KFQETQRPQANPANCVYQTDYPDFYFRITS-------SNH---MTELKEKFKRM-YIL---------------------- 52 (320)
Q Consensus 6 ~~~I~a~~~~lP~~~i~~~e~~~~~~~~~~-------~~~---~~gi~~~~r~~-~~~---------------------- 52 (320)
+++|.++|+|+|+++++|+|+.+.+..... .+| .+||++ ||+ +.+
T Consensus 32 ~~~I~~ig~~~P~~~v~n~~l~~~~~~~~~~~~~~~~~~~i~~~tGI~~--R~~~a~~~~~~~~~~~~~p~~~~~r~~~~ 109 (393)
T 1ted_A 32 VAVIEGLATGTPRRVVNQSDAADRVAELFLDPGQRERIPRVYQKSRITT--RRMAVDPLDAKFDVFRREPATIRDRMHLF 109 (393)
T ss_dssp EEEEEEEEEECCSCEEEHHHHHHHHHTC----CCTTHHHHHHHTSCCSE--EECSSCTTSTTHHHHTTCSSCHHHHHHHH
T ss_pred ccEEEEeeeeCCCcccCHHHHHHHHHHhcccccHHHHHHHHHHhCCcCc--ceeeecChHhcccccccCCCCHHHHHHHH
Confidence 379999999999999999999987632110 123 246666 777 543
Q ss_pred ccchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcc---------hhhhhhh--------h
Q 047978 53 VPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPS---------VKRVMLT--------A 115 (320)
Q Consensus 53 ~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~---------~c~~~l~--------l 115 (320)
+++..+|+.+|+++||+++|++++|||.||++|++++..|+.+.+|+.+||+++. .|+++++ +
T Consensus 110 ~~~~~~la~~Aa~~aL~~agl~~~~Id~vi~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~aCas~~~Al~~A~~~i 189 (393)
T 1ted_A 110 YEHAVPLAVDVSKRALAGLPYRAAEIGLLVLATSTGFIAPGVDVAIVKELGLSPSISRVVVNFMGCAAAMNALGTATNYV 189 (393)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCGGGEEEEEEEESSCCCSSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCCCccChHHHHHHHHcCcCCCcceeEeccchhHHHHHHHHHHHHHH
Confidence 5788999999999999999999999999999999997789999999999999852 3776654 6
Q ss_pred hcCCCCeEEEEEeecccccccCCCCCCchhhhhhhhhccCceEEEEeecCCCC-CCCCeeEEeccCceecCCCccccccc
Q 047978 116 ESNAGARVLVVCSEITVGTFRAPSDENLSCLVNRAIVGDGTAALIVGACPDIN-TERPLFHIVPTAQTILPDSEDAIKGH 194 (320)
Q Consensus 116 ~~~~~~~~LVv~~e~~s~~~~~~~~~~~~~~~~~~~~GDgAaA~ll~~~~~~~-~~~~~~~~~~~~~~~~p~~~~~~~~~ 194 (320)
+++..++|||+++|..+.. .++ +.++++..+..+|||||+|+||++.+... ......++...+....|++...+.|.
T Consensus 190 ~~G~~~~vLv~g~e~~s~~-~~~-~~~r~~~~~~~lfGDGA~A~vL~~~~~~~~~~~~~~~i~~~~~~~~~d~~~~~~~~ 267 (393)
T 1ted_A 190 RAHPAMKALVVCIELCSVN-AVF-ADDINDVVIHSLFGDGCAALVIGASQVQEKLEPGKVVVRSSFSQLLDNTEDGIVLG 267 (393)
T ss_dssp HHSTTCEEEEEEEEECGGG-CCC-CSSHHHHHHHHHBCEEEEEEEEEEECTTSCCCTTCEEEEEEEEEECTTCTTSEEEE
T ss_pred HcCCCCEEEEEEEEecccc-CCC-CCCHHHhhhhhhhcCccEEEEEecCCCccccCcceeeeeccceEEcCCchhhccce
Confidence 7899999999999999873 333 22234455689999999999999876421 01112355544444445543222221
Q ss_pred ccc------cc-----eechhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHHHHHHcCCCcchhhhhHHHHhccC
Q 047978 195 FRE------SP-----LIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKTKLRETRHVLSEYG 263 (320)
Q Consensus 195 ~~~------~g-----~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e~~~~~~~~~~~~G 263 (320)
+.. .| +..+.++++++++|+++|++++|| ++|++||.|.++++.+++.||++++|+..++.++++||
T Consensus 268 ~~~~g~~~~~g~~v~~~~~~~~~~~i~~aL~~agl~~~dI--d~~~~H~~~~~i~d~~~~~lgl~~~k~~~s~~~~~~~G 345 (393)
T 1ted_A 268 VNHNGITCELSENLPGYIFSGVAPVVTEMLWDNGLQISDI--DLWAIHPGGPKIIEQSVRSLGISAELAAQSWDVLARFG 345 (393)
T ss_dssp EETTEEEEEECTTHHHHHHHHHHHHHHHHHHHTTCCGGGC--SCEEECCSCHHHHHHHHHHHTCCGGGGHHHHHHHHHHC
T ss_pred ecCCCeEEecCchHHHHHHHHHHHHHHHHHHHcCCCHhHC--CEEEECCCcHHHHHHHHHHcCCCHHHHHHHHHHHHhhC
Confidence 111 22 234677889999999999999997 39999999999999999999999999987777899999
Q ss_pred CcccchHHHHHHHHHHhchhcCCC-CCCCCCceEEEEeeccchhhhheeeeecc
Q 047978 264 NMASATVLFVLDEMRKRSVEEGKA-TTGEELEWGVLLGFEAGLTVEAIVLRSIP 316 (320)
Q Consensus 264 n~~sasi~~~L~~~~~~~~~~g~l-~~G~~~d~vll~~~G~G~~~~a~~l~~~~ 316 (320)
||++||+|++|++++++ |++ ++| |++++++||+|++|++++|||..
T Consensus 346 Nt~sAsi~~~L~~~~~~----g~~~~~G---d~vll~~~G~G~t~~~~~l~~~~ 392 (393)
T 1ted_A 346 NMLSVSLIFVLETMVQQ----AESAKAI---STGVAFAFGPGVTVEGMLFDIIR 392 (393)
T ss_dssp BCTHHHHHHHHHHHHHS----CSSSSSS---EEEEEEEEETTTEEEEEEEEECC
T ss_pred CchHhHHHHHHHHHHhc----CccCCCC---CeEEEEEeccchhhhhhheeecc
Confidence 99999999999999998 998 599 99999999999999999999964
No 25
>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2
Probab=100.00 E-value=1.2e-44 Score=340.98 Aligned_cols=291 Identities=21% Similarity=0.265 Sum_probs=231.9
Q ss_pred eEEccccccCCCcccccccHHHHHhhhc---C-Cch------hHHHHHHHHHhhhc-----------------ccchHHH
Q 047978 7 FQETQRPQANPANCVYQTDYPDFYFRIT---S-SNH------MTELKEKFKRMYIL-----------------VPKVPKL 59 (320)
Q Consensus 7 ~~I~a~~~~lP~~~i~~~e~~~~~~~~~---~-~~~------~~gi~~~~r~~~~~-----------------~e~~~~l 59 (320)
++|.++++|+|+++++|+|+.+.+.... + .+| .+||++ ||++.+ +++..+|
T Consensus 10 ~~I~gig~~~P~~~v~~~~l~~~~~~~~~~~~~~~~~~~i~~~~GI~~--R~~~~~~~~~~~~~~~~~r~~~~~~~~~~l 87 (382)
T 1u0m_A 10 ATLCRPSVSVPEHVITMEETLELARRRHTDHPQLPLALRLIENTGVRT--RHIVQPIEDTLEHPGFEDRNKVYEREAKSR 87 (382)
T ss_dssp CEECCCEEECCSEEEEHHHHHHHHHHHHTTCTTHHHHHHHHHHTCCCE--EEESSCHHHHTSCCCHHHHHHHHHHHHHHH
T ss_pred eEEEEEEEeCCCcccCHHHHHHHHHHhccChhhHHHHHHHHHhcCCCc--ceeecChhhhccCCChhHHHHHHHHHHHHH
Confidence 7999999999999999999998763221 0 122 234554 666654 6788999
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcc---------hhhhhhh--------hhcCCCCe
Q 047978 60 GKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPS---------VKRVMLT--------AESNAGAR 122 (320)
Q Consensus 60 a~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~---------~c~~~l~--------l~~~~~~~ 122 (320)
+.+|+++||+++|+++++||.||++|++++..|+.+.+|+.+||+++. .|+++++ ++++..++
T Consensus 88 a~~Aa~~aL~~agl~~~~id~vi~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~aCss~~~Al~~A~~~i~~g~~~~ 167 (382)
T 1u0m_A 88 VPAVIQRALDDAELLATDIDVIIYVSCTGFMMPSLTAWLINEMGFDSTTRQIPIAQLGCAAGGAAINRAHDFCTAYPEAN 167 (382)
T ss_dssp HHHHHHHHHHHHTCCGGGCSEEEEECSSSCCSSCHHHHHHHHTTCCTTCEEEEECSCGGGHHHHHHHHHHHHHHHSTTCE
T ss_pred HHHHHHHHHHHhCCCHHHCCEEEEEecCCCCCCcHHHHHHHHhCCCCCcceEEccCCcCHHHHHHHHHHHHHHHcCCCCE
Confidence 999999999999999999999999999997789999999999999751 3776654 67899999
Q ss_pred EEEEEeecccccccCCCCCCchhhhhhhhhccCceEEEEeecCCCCCCCCeeEEeccCceecCCCcccccccccccc---
Q 047978 123 VLVVCSEITVGTFRAPSDENLSCLVNRAIVGDGTAALIVGACPDINTERPLFHIVPTAQTILPDSEDAIKGHFRESP--- 199 (320)
Q Consensus 123 ~LVv~~e~~s~~~~~~~~~~~~~~~~~~~~GDgAaA~ll~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g--- 199 (320)
+||+++|..+. +.+|.|+.++.....++|||||+|+||++.+.. .+++........++..+.+.+.....|
T Consensus 168 vLv~g~e~~s~-~~~~~d~~~~~~~~~~lfGDGA~A~vL~~~~~~-----g~~i~~~~~~~~~~~~~~~~~~~~~~g~~~ 241 (382)
T 1u0m_A 168 ALIVACEFCSL-CYQPTDLGVGSLLCNGLFGDGIAAAVVRGRGGT-----GVRLERNGSYLIPKTEDWIMYDVKATGFHF 241 (382)
T ss_dssp EEEEEEEEGGG-GCCTTCCSHHHHHHHHHBCEEEEEEEEETTTCS-----EEEEEEEEEEECSSCTTTEEEEEETTEEEE
T ss_pred EEEEEEeccch-hcCcccCCHHHhhccchhcCCcEEEEEeccCCC-----CcEEEEeeeEecCChHHhcCceecCCceEE
Confidence 99999999986 556666544334457899999999999976542 234433222223333221111111111
Q ss_pred --------eechhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHHHHHHcCCCcchhhhhHHHHhccCCcccchHH
Q 047978 200 --------LIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKTKLRETRHVLSEYGNMASATVL 271 (320)
Q Consensus 200 --------~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~ 271 (320)
+..+.++ +++++|+++|++++|| ++|++||.|.++++.+++.||++++|+..++.++++||||++||+|
T Consensus 242 ~~~~~v~~~~~~~~~-~i~~aL~~agl~~~dI--d~v~~H~~~~~i~d~~~~~lgl~~~k~~~s~~~~~~~Gnt~sAsi~ 318 (382)
T 1u0m_A 242 LLDKRVPATMEPLAP-ALKELAGEHGWDASDL--DFYIVHAGGPRILDDLSTFLEVDPHAFRFSRATLTEYGNIASAVVL 318 (382)
T ss_dssp EECTTTGGGHHHHHH-HHHHHHHTTSCCSSCC--SCCEEECSHHHHHHHHHHHSCSCGGGGHHHHHHHHHTCBCTTHHHH
T ss_pred EeCcHHHHHHHHHHH-HHHHHHHHcCCCHHHC--CEEEECCCCHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhhHHH
Confidence 2346677 9999999999999997 3999999999999999999999999998766789999999999999
Q ss_pred HHHHHHHHhchhcCCCCCCCCCceEEEEeeccchhhhheeeeec
Q 047978 272 FVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEAIVLRSI 315 (320)
Q Consensus 272 ~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~~l~~~ 315 (320)
++|++++++ +++++| |++|+++||+|++|++++|||.
T Consensus 319 ~~L~~~~~~----g~~~~G---d~vll~~~G~G~t~~~~vl~~~ 355 (382)
T 1u0m_A 319 DALRRLFDE----GGVEEG---ARGLLAGFGPGITAEMSLGCWQ 355 (382)
T ss_dssp HHHHHHHHS----CCCCSS---CCCEEEEEETTTEEEEEEEEEE
T ss_pred HHHHHHHHh----cCCCCC---CEEEEEEEcccceeEEEEEEEe
Confidence 999999998 999999 9999999999999999999996
No 26
>2v4w_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.7A {Homo sapiens} PDB: 2wya_A*
Probab=100.00 E-value=9.3e-45 Score=344.88 Aligned_cols=284 Identities=14% Similarity=0.151 Sum_probs=227.3
Q ss_pred cceEEccccccCCCcccccccHHHHHhhhcCCch-hHHHHHHHHHhhhcccchHHHHHHHHHHHHHHcCCCCCCcCEEEE
Q 047978 5 GKFQETQRPQANPANCVYQTDYPDFYFRITSSNH-MTELKEKFKRMYILVPKVPKLGKEAVSKAIKEWGQPISKITHLIS 83 (320)
Q Consensus 5 ~~~~I~a~~~~lP~~~i~~~e~~~~~~~~~~~~~-~~gi~~~~r~~~~~~e~~~~la~~Aa~~aL~~ag~~~~dId~li~ 83 (320)
++++|.++|.|+|+++++|+|+.+.+ +.+..+ .+||+++.|+++.++|+..+||++|+++||+++|++|+|||+||+
T Consensus 4 ~~vgI~gig~ylP~~~v~n~el~~~~--g~~~~~~~~Gig~r~~~va~~~E~~~~La~~Aa~~AL~~agi~~~dId~Iiv 81 (460)
T 2v4w_A 4 KDVGILALEVYFPAQYVDQTDLEKYN--NVEAGKYTVGLGQTRMGFCSVQEDINSLCLTVVQRLMERIQLPWDSVGRLEV 81 (460)
T ss_dssp SSCEEEEEEEECCSEEEEHHHHHHHT--TCCTTCCCCCCCCCEEECCCTTCCHHHHHHHHHHHHHHHHTCCGGGEEEEEE
T ss_pred CceEEEEEEEECCCcEecHHHHHHHh--CCCHHHeeeeeeeEEEEECCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 57999999999999999999999887 444333 467877334477778999999999999999999999999999999
Q ss_pred EeeCC-CCCCCHHHHHHHHcCC---Ccc-------hhhhhhh--------hhcCC--CCeEEEEEeecccccccCCCCCC
Q 047978 84 CSVSG-VDMPGADYQLTKLLGL---KPS-------VKRVMLT--------AESNA--GARVLVVCSEITVGTFRAPSDEN 142 (320)
Q Consensus 84 ~s~t~-~~~p~~a~~l~~~LGl---~~~-------~c~~~l~--------l~~~~--~~~~LVv~~e~~s~~~~~~~~~~ 142 (320)
+|+|+ +..|+++++||++||+ ++. .|+|+++ ++++. .++||||++|+.+ +.++.+
T Consensus 82 aT~t~~~~~ps~A~~v~~~LGl~g~~~~~a~Dv~~ACsGg~~AL~~A~~~I~sg~~~~~~aLVVgaE~~s--~~~~~~-- 157 (460)
T 2v4w_A 82 GTETIIDKSKAVKTVLMELFQDSGNTDIEGIDTTNACYGGTASLFNAANWMESSSWDGRYAMVVCGDIAV--YPSGNA-- 157 (460)
T ss_dssp ECSCCSCSSSCHHHHHGGGTGGGTCCCCBCCEEESGGGHHHHHHHHHHHHHTSTTCCSCEEEEEEEEEEC--CCSSTT--
T ss_pred EecCCCCCCCcHHHHHHHHhCCCCCCCcEEEEecchhHHHHHHHHHHHHHHHhCCccCCEEEEEeccccc--ccCCCC--
Confidence 99999 8899999999999998 221 3888766 67787 4999999999997 444443
Q ss_pred chhhhhhhhhccCceEEEEeecCCCCCCCCeeEEeccCce-------ecCCCcccccccccccc-----eechhHHHH--
Q 047978 143 LSCLVNRAIVGDGTAALIVGACPDINTERPLFHIVPTAQT-------ILPDSEDAIKGHFRESP-----LIADNIDKF-- 208 (320)
Q Consensus 143 ~~~~~~~~~~GDgAaA~ll~~~~~~~~~~~~~~~~~~~~~-------~~p~~~~~~~~~~~~~g-----~~~~~~~~~-- 208 (320)
..++||||+|+||++++.. .+++.+.++. ..|... ..++.++| ++.+.++++
T Consensus 158 ------r~t~GDGA~A~ll~~~~~l-----~~~~~~~Gs~~~~l~d~~~p~~~---~~~~~mdG~~v~~~av~~l~~~~~ 223 (460)
T 2v4w_A 158 ------RPTGGAGAVAMLIGPKAPL-----ALERGLRGTHMENVYDFYKPNLA---SEYPIVDGKLSIQCYLRALDRCYT 223 (460)
T ss_dssp ------GGGCEEEEEEEEEESSCSE-----EECTTCCEEEECCCCSEECCCTT---CSCCEECHHHHHHHHHHHHHHHHH
T ss_pred ------CcccccceeEEEeecCCCc-----eEEEcceecceeeeeccCCCCCC---CCCeEEeCHHHHHHHHHHHHHHHH
Confidence 2446999999999986531 1222222221 122211 12467777 567788888
Q ss_pred -----HHHHhhh----cCCCCCCCCceEEEEcCCChhHHHHHHHHcCCC-------------------------------
Q 047978 209 -----LAESFDQ----VSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLE------------------------------- 248 (320)
Q Consensus 209 -----i~~~l~~----~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~------------------------------- 248 (320)
++++|++ +|++++|+ +++||||+|.+|++.+.++|+++
T Consensus 224 ~y~~~~~~~l~~~~~~~gl~~~di--d~~v~Hqan~rii~~~~~rL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (460)
T 2v4w_A 224 SYRKKIQNQWKQAGSDRPFTLDDL--QYMIFHTPFCKMVQKSLARLMFNDFLSASSDTQTSLYKGLEAFGGLKLEDTYTN 301 (460)
T ss_dssp HHHHHHHHHHHHTTCCCCCCGGGC--SEEEECCSSHHHHHHHHHHHHHHHHHHSCHHHHHHHCGGGGGGTTCCGGGGTTC
T ss_pred HHHHHHHHHHHhhccccCCCHHHh--ceEeecCCchHHHHHHHHHcCCCcccccccccccccccchhhhccccccccccc
Confidence 6667777 89999997 49999999999999999999988
Q ss_pred ---------------cchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCC--CCCCCCCceEEEEeeccchhhhhee
Q 047978 249 ---------------KTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGK--ATTGEELEWGVLLGFEAGLTVEAIV 311 (320)
Q Consensus 249 ---------------~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~--l~~G~~~d~vll~~~G~G~~~~a~~ 311 (320)
.+|+..+..+.+++|||++||+|++|+.++++ ++ +++| |+|+|+|||+|++.....
T Consensus 302 ~~~~~~~~~~~~~~~~ekv~~~l~~~~~~GNt~aASiplaL~s~l~~----~~~~~~~G---~rill~syGsG~~s~~fs 374 (460)
T 2v4w_A 302 KDLDKALLKASQDMFDKKTKASLYLSTHNGNMYTSSLYGCLASLLSH----HSAQELAG---SRIGAFSYGSGLAASFFS 374 (460)
T ss_dssp HHHHHHHHHHHHHHHHHHTGGGGHHHHHHCCCGGGHHHHHHHHHHHH----SCHHHHTT---CEEEEEEEETTTEEEEEE
T ss_pred hhHHHHHHhhhhhhhHhhcccccchhhccCccHHHHHHHHHHHHHHh----CCcccCCC---CEEEEEEecCCcceeEEE
Confidence 57887663345999999999999999999998 74 7889 999999999999999998
Q ss_pred eeeccC
Q 047978 312 LRSIPM 317 (320)
Q Consensus 312 l~~~~~ 317 (320)
+++.+-
T Consensus 375 ~~v~~~ 380 (460)
T 2v4w_A 375 FRVSQD 380 (460)
T ss_dssp EEECSC
T ss_pred EEEeCC
Confidence 888764
No 27
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}
Probab=100.00 E-value=2.5e-43 Score=367.91 Aligned_cols=312 Identities=57% Similarity=0.957 Sum_probs=240.7
Q ss_pred cceEEccccccCCCcccccccHHHHHhh-hcCCch---------h---HHHHHHHHHhhhccc-----------------
Q 047978 5 GKFQETQRPQANPANCVYQTDYPDFYFR-ITSSNH---------M---TELKEKFKRMYILVP----------------- 54 (320)
Q Consensus 5 ~~~~I~a~~~~lP~~~i~~~e~~~~~~~-~~~~~~---------~---~gi~~~~r~~~~~~e----------------- 54 (320)
.+++|+++|+|+|+.+++|+|+.+.+.. ..+..| + +||.+ |+++.+++
T Consensus 602 ~~~~I~g~g~~~P~~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~sGI~~--r~~~~~~~~~~~~~~~~~~~~~~~~ 679 (979)
T 3tsy_A 602 GPATILAIGTATPDHCVYQSDYADYYFKVTKSEHMTALKKKFNRICDKSMIKK--RYIHLTEEMLEEHPNIGAYMAPSLN 679 (979)
T ss_dssp SCEEEEEEEEECCSCEEEHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTCCCE--EECSCCHHHHHHCHHHHSSSSCCHH
T ss_pred CCceeecccCCCCCCccCHHHHHHHHHHhccccchHHHHHHHHHHHHhcCcce--eeEecChhhhhcCcccccccCCCHH
Confidence 4699999999999999999999998421 223333 1 23333 45544333
Q ss_pred --------chHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcc---------hhhhhhh---
Q 047978 55 --------KVPKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPS---------VKRVMLT--- 114 (320)
Q Consensus 55 --------~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~---------~c~~~l~--- 114 (320)
+..+|+++|+++||+++|++++|||+||++|++++..|+.+++|+++||+++. .|+++++
T Consensus 680 ~r~~~~~~~~~~la~~Aa~~AL~~agl~~~dId~ii~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~~v~~aCsg~~~Al~ 759 (979)
T 3tsy_A 680 IRQEIITAEVPKLGKEAALKALKEWGQPKSKITHLVFCTTSGVEMPGADYKLANLLGLEPSVRRVMLYHQGCYAGGTVLR 759 (979)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCCSSCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEEeeCCCCCCcHHHHHHHHcCCCcccEEEeeeccccHhHHHHHH
Confidence 47889999999999999999999999999997778899999999999999752 3777765
Q ss_pred -----hhcCCCCeEEEEEeecccccccCCCCCCchhhhhhhhhccCceEEEEeecCCCCCCCCeeEEeccCceecCCCcc
Q 047978 115 -----AESNAGARVLVVCSEITVGTFRAPSDENLSCLVNRAIVGDGTAALIVGACPDINTERPLFHIVPTAQTILPDSED 189 (320)
Q Consensus 115 -----l~~~~~~~~LVv~~e~~s~~~~~~~~~~~~~~~~~~~~GDgAaA~ll~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 189 (320)
+++|..++||||++|..+..+.+......+.....++|||||+|+||++.+...+....+.....+....+....
T Consensus 760 ~A~~~i~sG~~~~vLvvg~e~~~~~~~~~~~~~~~~~~~~~lfGDGA~A~vL~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 839 (979)
T 3tsy_A 760 TAKDLAENNAGARVLVVCSEITVVTFRGPSEDALDSLVGQALFGDGSAAVIVGSDPDISIERPLFQLVSAAQTFIPNSAG 839 (979)
T ss_dssp HHHHHHHTSTTCEEEEEEEECTTTTCCCCCSSCHHHHHHHHHBCCEEEEEEEESSCCSSSCCCCEEEEEEEEEECTTCTT
T ss_pred HHHHHHHhCCCCEEEEEEEEecchheeCCCccCHHHHhhhhhccCceEEEEEecCCCccccCcceEEEeeeeEEecCchh
Confidence 788999999999999987655443333344556678999999999999876543333334444333333333221
Q ss_pred cccccccccc-----------eechhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHHHHHHcCCCcchhhhhHHH
Q 047978 190 AIKGHFRESP-----------LIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKTKLRETRHV 258 (320)
Q Consensus 190 ~~~~~~~~~g-----------~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e~~~~~~~~ 258 (320)
...+.+...| +..+.++++++++|+++|++++|+ ++|++||+|.++++.++++||+|++|+..++.+
T Consensus 840 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~al~~agl~~~di--d~~~~Hq~~~~i~~~~~~~lgl~~~k~~~~~~~ 917 (979)
T 3tsy_A 840 AIAGNLREVGLTFHLWPNVPTLISENVEKCLTQAFDPLGISDWNS--LFWIAHPGGPAILDAVEAKLNLDKKKLEATRHV 917 (979)
T ss_dssp SEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHGGGTCCCGGG--SEEEECCSCHHHHHHHHHHHTCCTTTTHHHHHH
T ss_pred heEEEEecCceEEEEchHHHHHHHHHHHHHHHHHHhhcCCCCccc--ceEEECCCChHHHHHHHHHcCCChHHHHHHHHH
Confidence 1111111111 345667889999999999999997 399999999999999999999999999998888
Q ss_pred HhccCCcccchHHHHHHHHHHhchhcCCCCCCCCCceEEEEeeccchhhhheeeeeccCcCC
Q 047978 259 LSEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEAIVLRSIPMVSN 320 (320)
Q Consensus 259 ~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~~l~~~~~~~~ 320 (320)
+++||||+|||+|++|+++++.....+++++|.|.|++++++||+|++|+++++||.+.+.+
T Consensus 918 l~~~GNtssasi~~~L~~~~~~~~~G~~v~~g~~~~~~ll~~~G~G~t~~~~~l~~~~~~~~ 979 (979)
T 3tsy_A 918 LSEYGNMSSACVLFILDEMRKKSLKGERATTGEGLDWGVLFGFGPGLTIETVVLHSIPMVTN 979 (979)
T ss_dssp HHHHCBCTTHHHHHHHHHHHHHHHHTTCSBTTTTCSEEEEEEECGGGEEEEEEEECCBCCC-
T ss_pred HHHcCCcchhhHHHHHHHHHhhhcccccccCCCCcceeEEEEeCCchHHHHHHHHhccccCC
Confidence 99999999999999999998753333467777667788999999999999999999998764
No 28
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2
Probab=100.00 E-value=1.9e-43 Score=327.70 Aligned_cols=288 Identities=17% Similarity=0.211 Sum_probs=233.1
Q ss_pred cceEEccccccCCCcccccccHHHHHhhhcCCchh---HHHHHHHHHhhhcccchHHHHHHHHHHHHHHcCCCCCCcCEE
Q 047978 5 GKFQETQRPQANPANCVYQTDYPDFYFRITSSNHM---TELKEKFKRMYILVPKVPKLGKEAVSKAIKEWGQPISKITHL 81 (320)
Q Consensus 5 ~~~~I~a~~~~lP~~~i~~~e~~~~~~~~~~~~~~---~gi~~~~r~~~~~~e~~~~la~~Aa~~aL~~ag~~~~dId~l 81 (320)
.+++|.++++|+|+++++|+++.+.+ ..+.+|+ +||.+ ||++.++++..+|+.+|+++||+++|+++++||.|
T Consensus 10 ~~~~I~gig~~~P~~~~~~~~~~~~~--~~~~~~i~~~~Gi~~--R~~~~~~~~~~~la~~Aa~~al~~ag~~~~~id~v 85 (339)
T 1mzj_A 10 RFSRVLGVGSYRPRREVSNKEVCTWI--DSTEEWIETRTGIRS--RRIAEPDETIQVMGVAASRRALEHAGVDPAEIDLV 85 (339)
T ss_dssp CEEEEEEEEEECCSCEEEHHHHTTTS--SCCHHHHHHHHCCSE--EECCCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEE
T ss_pred CceEEEEEEEeCCCccccHHHHHHHh--CCCHHHHHHhcCceE--EEEeCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEE
Confidence 46899999999999999999998765 3344553 45665 77877789999999999999999999999999999
Q ss_pred EEEeeCC-CCCCCHHHHHHHHcCCCcc-------hhhhhhh--------hhcCCCCeEEEEEeecccccccCCCCCCchh
Q 047978 82 ISCSVSG-VDMPGADYQLTKLLGLKPS-------VKRVMLT--------AESNAGARVLVVCSEITVGTFRAPSDENLSC 145 (320)
Q Consensus 82 i~~s~t~-~~~p~~a~~l~~~LGl~~~-------~c~~~l~--------l~~~~~~~~LVv~~e~~s~~~~~~~~~~~~~ 145 (320)
|++|+++ +..|+.+.+|+.+||+++. .|+++++ ++++..+++||+++|..++ ..+|.|
T Consensus 86 i~gt~~~~~~~p~~a~~v~~~lgl~~~~~~~v~~aCas~~~Al~~A~~~i~~G~~~~vLv~g~e~~s~-~~~~~d----- 159 (339)
T 1mzj_A 86 VVSTMTNFVHTPPLSVAIAHELGADNAGGFDLSAACAGFCHALSIAADAVESGGSRHVLVVATERMTD-VIDLAD----- 159 (339)
T ss_dssp EEECSCCCCCSSCHHHHHHHHHTCTTCEEEEEECGGGHHHHHHHHHHHHHHHSSCSCEEEEEEEEGGG-GSCSSC-----
T ss_pred EEEecCCCCCCChHHHHHHHHhCCCCccEEEccccchHHHHHHHHHHHHHHCCCCCEEEEEEEccccc-ccCccc-----
Confidence 9999998 7799999999999999842 3777654 6789999999999999886 445543
Q ss_pred hhhhhhhccCceEEEEeecCCCCCCCCeeEEeccCc----eec----CCCcccc---cccccccc-----eechhHHHHH
Q 047978 146 LVNRAIVGDGTAALIVGACPDINTERPLFHIVPTAQ----TIL----PDSEDAI---KGHFRESP-----LIADNIDKFL 209 (320)
Q Consensus 146 ~~~~~~~GDgAaA~ll~~~~~~~~~~~~~~~~~~~~----~~~----p~~~~~~---~~~~~~~g-----~~~~~~~~~i 209 (320)
+.+..+|||||+|+||++.+..++.. ..+.+.+. ... |...+.+ ..++.++| +..+.+++++
T Consensus 160 ~~~~~~~GdGA~A~vL~~~~~~~i~~--~~~~~~g~~~~~~~~~g~~p~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i 237 (339)
T 1mzj_A 160 RSLSFLFGDGAGAAVVGPSDVPGIGP--VVRGIDGTGLGSLHMSSSWDQYVEDPSVGRPALVMDGKRVFRWAVADVVPAA 237 (339)
T ss_dssp TTTTTTBCEEEEEEEEEEESSCCBCC--CEEEECGGGGGGEEESCCHHHHTTCSSSCSCCEEECHHHHHHHHHHHHHHHH
T ss_pred cccceEeccCceEEEEEecCCCCeEE--EEEEEcCCCCCeEEecCCCCCcccccccccceEEeeCHHHHHHHHHHHHHHH
Confidence 33578999999999999875433221 12223222 111 2111100 12345555 2346788999
Q ss_pred HHHhhhcCCCCCCCCceEEEEcCCChhHHHHHHHHcCCCcc-hhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCC
Q 047978 210 AESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKT-KLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKAT 288 (320)
Q Consensus 210 ~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e-~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~ 288 (320)
+++|+++|++++|| ++|++||.+.++++.+.+.||++++ ++..+ +++|||+++||++++|++++++ |+++
T Consensus 238 ~~aL~~agl~~~di--d~v~~H~~~~~~~d~i~~~lg~~~~~~~~~~---~~~~Gn~~sAs~~~~L~~~~~~----g~~~ 308 (339)
T 1mzj_A 238 REALEVAGLTVGDL--VAFVPHQANLRIIDVLVDRLGVPEHVVVSRD---AEDTGNTSSASVALALDRLVRS----GAVP 308 (339)
T ss_dssp HHHHHTTTCCGGGC--SEEEECCSCHHHHHHHHHHHTCCTTSEECCT---HHHHCBCTTHHHHHHHHHHHHH----TSSC
T ss_pred HHHHHHcCCCHHHC--CEEEECCCCHHHHHHHHHHhCCCccceeeeh---hhhcCchHHHHHHHHHHHHHHc----CCCC
Confidence 99999999999997 3999999999999999999999999 98864 7899999999999999999998 9999
Q ss_pred CCCCCceEEEEeeccchhhhheeeeecc
Q 047978 289 TGEELEWGVLLGFEAGLTVEAIVLRSIP 316 (320)
Q Consensus 289 ~G~~~d~vll~~~G~G~~~~a~~l~~~~ 316 (320)
+| |++|+++||+|++|+++++||..
T Consensus 309 ~G---~~vll~~~G~G~t~~~~~l~~~~ 333 (339)
T 1mzj_A 309 GG---GPALMIGFGAGLSYAGQALLLPD 333 (339)
T ss_dssp TT---CEEEEEEEETTTEEEEEEEECCC
T ss_pred CC---CEEEEEEEchhheeEEEEEEeCC
Confidence 99 99999999999999999999964
No 29
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}
Probab=100.00 E-value=4.4e-43 Score=324.18 Aligned_cols=288 Identities=19% Similarity=0.242 Sum_probs=231.2
Q ss_pred ceEEccccccCCCcccccccHHHHHhhhcCCchh---HHHHHHHHHhhhcccchHHHHHHHHHHHHHHcCCCCCCcCEEE
Q 047978 6 KFQETQRPQANPANCVYQTDYPDFYFRITSSNHM---TELKEKFKRMYILVPKVPKLGKEAVSKAIKEWGQPISKITHLI 82 (320)
Q Consensus 6 ~~~I~a~~~~lP~~~i~~~e~~~~~~~~~~~~~~---~gi~~~~r~~~~~~e~~~~la~~Aa~~aL~~ag~~~~dId~li 82 (320)
+++|.++++|+|+++++|+++.+.+ ..+++|+ +||.+ ||++.+ ++..+|+.+|+++||+++|+ ++||.||
T Consensus 5 ~~~I~g~g~~~P~~~~~~~~~~~~~--~~~~~~i~~~~Gi~~--R~~~~~-~~~~~la~~Aa~~al~~ag~--~~id~vi 77 (331)
T 2x3e_A 5 AAVVCGLGSYLPEAVLSNDMLAAEL--DTSDAWISSRTGVRQ--RHIAGD-LGSGDLALRAASAALASAGL--ERVDAVV 77 (331)
T ss_dssp EEEEEEEEEECCSCEEEHHHHHHHT--TCCHHHHHHHHCCCE--EECCTT-CCHHHHHHHHHHHHHHHHTC--SCCSEEE
T ss_pred eeEEEEEEEECCCcEecHHHHHHHh--CCCHHHHHHhhCceE--EEecCC-CCHHHHHHHHHHHHHHhCCc--ccCCEEE
Confidence 5899999999999999999999876 3445553 45665 777644 88999999999999999999 9999999
Q ss_pred EEeeCC-CCCCCHHHHHHHHcCCCcc-------hhhhhhh--------hhcCCCCeEEEEEeecccccccCCCCCCchhh
Q 047978 83 SCSVSG-VDMPGADYQLTKLLGLKPS-------VKRVMLT--------AESNAGARVLVVCSEITVGTFRAPSDENLSCL 146 (320)
Q Consensus 83 ~~s~t~-~~~p~~a~~l~~~LGl~~~-------~c~~~l~--------l~~~~~~~~LVv~~e~~s~~~~~~~~~~~~~~ 146 (320)
++|+++ +..|+.+.+|+.+||+++. .|+++++ ++++..+++||+++|..++ +.++.| +
T Consensus 78 ~~t~~~~~~~p~~a~~v~~~lgl~~~~~~~v~~aCas~~~Al~~A~~~i~~g~~~~vLv~g~e~~s~-~~~~~d-----~ 151 (331)
T 2x3e_A 78 LATSTGDFCCPATAPRVAARLGLVGALAFDLSAAATGFVYGLASVGSLISAGLADSALLVGVDTFSH-TLDPAD-----R 151 (331)
T ss_dssp EECSSCSEEESCSHHHHHHHTTCTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECGGG-GSCTTC-----H
T ss_pred EEeCCCCCCCChHHHHHHHHhCCCCCcEEEEcCcChHHHHHHHHHHHHHHcCCCCEEEEEEeecccc-CCCccc-----c
Confidence 999998 7789999999999999842 3877654 6789999999999999986 545543 3
Q ss_pred hhhhhhccCceEEEEeecCCCCCCCCee--EEeccCc----eecCCCccc------ccccccccc-----eechhHHHHH
Q 047978 147 VNRAIVGDGTAALIVGACPDINTERPLF--HIVPTAQ----TILPDSEDA------IKGHFRESP-----LIADNIDKFL 209 (320)
Q Consensus 147 ~~~~~~GDgAaA~ll~~~~~~~~~~~~~--~~~~~~~----~~~p~~~~~------~~~~~~~~g-----~~~~~~~~~i 209 (320)
.+..+|||||+|+||++.+... ....+ .+.+.+. ...|..... ...++.++| +..+.+++++
T Consensus 152 ~~~~~~GdGA~A~vL~~~~~a~-~~~i~~~~~~~dg~~~~~~~~p~~~~~~p~~~~~~~~~~~~g~~v~~~~~~~~~~~i 230 (331)
T 2x3e_A 152 STRALFGDGAGAVVLRAGDAEE-EGALLAFDLGSDGHQFDLLMTPAVSRAERSSGQASNYFRMDGKAVFGQAVTQMSDSV 230 (331)
T ss_dssp HHHHHBCCEEEEEEEEEECTTS-TTBEEEEEEEECGGGTTSEEEECCCHHHHHHTCCCCCCEECHHHHHHHHHHHHHHHH
T ss_pred ccceeeccccEEEEEEecCCCC-CCceEEEEEEEcCCCCCeEEecCCCCCCCCccCcCceEEecCHHHHHHHHHHHHHHH
Confidence 4678999999999999876210 01111 2222221 122321100 012344555 3346788999
Q ss_pred HHHhhhcCCCCCCCCceEEEEcCCChhHHHHHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCC
Q 047978 210 AESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATT 289 (320)
Q Consensus 210 ~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~ 289 (320)
+++|+++|++++|| ++|++||.+.++++.+.+.||++++|++.+ +.+|||+++||+|++|++++++ +++++
T Consensus 231 ~~aL~~agl~~~di--d~~~~H~~~~~~~d~~~~~lg~~~~~~~~~---~~~~Gnt~sAs~~~~L~~~~~~----~~~~~ 301 (331)
T 2x3e_A 231 RRVLDRVGWQASDL--HHLVPHQANTRILAAVADQLDLPVERVVSN---IAEVGNTVAASIPLALAHGLRQ----GILRD 301 (331)
T ss_dssp HHHHHHHTCCGGGC--SEEEECCCCHHHHHHHHHHHTCCGGGBCCC---HHHHCBCGGGHHHHHHHHHHHT----TCSCT
T ss_pred HHHHHHcCCCHHHC--CEEEEcCCCHHHHHHHHHHcCCCHHHHhhh---HhhhCcHHHHHHHHHHHHHHHh----CCCCC
Confidence 99999999999997 399999999999999999999999999875 7999999999999999999998 99999
Q ss_pred CCCCceEEEEeeccchhhhheeeeeccCcC
Q 047978 290 GEELEWGVLLGFEAGLTVEAIVLRSIPMVS 319 (320)
Q Consensus 290 G~~~d~vll~~~G~G~~~~a~~l~~~~~~~ 319 (320)
| |++|+++||+|++|+++++||++-|.
T Consensus 302 G---~~vll~~~G~G~~~~~~~l~~~~~~~ 328 (331)
T 2x3e_A 302 G---GNMVLTGFGAGLTWGSVALRWPKIVP 328 (331)
T ss_dssp T---CEEEEEEEETTTEEEEEEEECCCCCC
T ss_pred C---CEEEEEEEeHHhhheeeEEEECCccc
Confidence 9 99999999999999999999986654
No 30
>3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A*
Probab=100.00 E-value=3e-44 Score=337.78 Aligned_cols=278 Identities=13% Similarity=0.106 Sum_probs=225.1
Q ss_pred ceEEccccccCCCcccccccHHHHHhhhcCCchh-HHHHHHHHHhhhcccchHHHHHHHHHHHHHHcCCCCCCcCEEEEE
Q 047978 6 KFQETQRPQANPANCVYQTDYPDFYFRITSSNHM-TELKEKFKRMYILVPKVPKLGKEAVSKAIKEWGQPISKITHLISC 84 (320)
Q Consensus 6 ~~~I~a~~~~lP~~~i~~~e~~~~~~~~~~~~~~-~gi~~~~r~~~~~~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~ 84 (320)
+++|.+++.|+|+++++|+|+.+.+ +.+.+|+ .+++.+.|+++.++|+..+|+++|+++||++++ |+|||+||++
T Consensus 7 ~v~I~~~g~y~P~~~v~~~~l~~~~--g~~~~~~~~~~Gi~~r~~~~~~e~~~~La~~Aa~~aL~~a~--~~~Id~li~~ 82 (388)
T 3v4n_A 7 TIGIDKISFFVPPYYIDMTALAEAR--NVDPGKFHIGIGQDQMAVNPISQDIVTFAANAAEAILTKED--KEAIDMVIVG 82 (388)
T ss_dssp CEEEEEEEEECCSEEEEHHHHHHHT--TSCTHHHHTTTCCCEEECCCTTCCHHHHHHHHHHTTCCHHH--HHHEEEEEEE
T ss_pred eEEEEEEEEECCCeEEcHHHHHHHh--CCCHHHHHHHhCceEEEECCCCCCHHHHHHHHHHHHHHhCC--cccCCEEEEE
Confidence 6999999999999999999999886 4556664 333333378888899999999999999999997 9999999999
Q ss_pred eeCC-CCCCCHHHHHHHHcCCCcc--------hhhhhhh--------hhcCCCCeEEEEEeecccccccCCCCCCchhhh
Q 047978 85 SVSG-VDMPGADYQLTKLLGLKPS--------VKRVMLT--------AESNAGARVLVVCSEITVGTFRAPSDENLSCLV 147 (320)
Q Consensus 85 s~t~-~~~p~~a~~l~~~LGl~~~--------~c~~~l~--------l~~~~~~~~LVv~~e~~s~~~~~~~~~~~~~~~ 147 (320)
|+++ +..|+.+.+|+++||+++. .|+++++ +++++.++||||++|..+. ..++.+
T Consensus 83 t~t~~~~~ps~a~~v~~~LGl~~~~~~~dv~~aC~gg~~AL~~A~~~i~sg~~~~vLVvg~e~~s~-~~~~~~------- 154 (388)
T 3v4n_A 83 TESSIDESKAAAVVLHRLMGIQPFARSFEIKEAXYGATAGLQLAKNHVALHPDKKVLVVAADIAKY-GLNSGG------- 154 (388)
T ss_dssp CSSCSBSSSCHHHHHHHHTTCCSSCEEEEEESGGGHHHHHHHHHHHHHHHCTTCEEEEEEEEEECC-CTTCTT-------
T ss_pred eccCCCcCccHHHHHHHHcCCCCCceEeehhhhhhHHHHHHHHHHHHHhcCCCCEEEEEEehhhcc-cCCCCC-------
Confidence 9999 8899999999999999862 3877655 6789999999999999986 444332
Q ss_pred hhhhhccCceEEEEeecCCCCCCCCeeEEec--cCc------eecCCCcccccccccccc-----eechhHHHHHHHHhh
Q 047978 148 NRAIVGDGTAALIVGACPDINTERPLFHIVP--TAQ------TILPDSEDAIKGHFRESP-----LIADNIDKFLAESFD 214 (320)
Q Consensus 148 ~~~~~GDgAaA~ll~~~~~~~~~~~~~~~~~--~~~------~~~p~~~~~~~~~~~~~g-----~~~~~~~~~i~~~l~ 214 (320)
..+|||||+|+||++++.. +.+.. .+. .+.|...+ +..++| .+.+.++++++++|+
T Consensus 155 -~~lfGDGA~A~ll~~~~~i------l~~~~~~~~~~~~~~df~~p~~~~----~~~~~g~~~~~~~~~~~~~~~~~~l~ 223 (388)
T 3v4n_A 155 -EPTQGAGAVAMLVSSEPRI------LALKEDNVMLTQDIYDFWRPTGHP----YPMVDGPLSNETYIQSFAQVWDEHKK 223 (388)
T ss_dssp -GGGCEEEEEEEEEEESCSS------EEECSCCEEEECCCCSEECBTTCS----SCEECHHHHHHHHHHHHHHHHHHHHH
T ss_pred -CCccccceeEEEeecCCCc------eEEeccccccchhccccccCCCCC----CceeccHhHHHHHHHHHHHHHHHHHH
Confidence 5889999999999997642 22211 110 12233211 123344 456888999999999
Q ss_pred hcCCCCCCCCceEEEEcCCCh--------hHH----HHHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHHhch
Q 047978 215 QVSLNDHDWNSLFWMMHPIGP--------AVL----DQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSV 282 (320)
Q Consensus 215 ~~g~~~~d~~~~~~i~h~~~~--------~~~----~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~ 282 (320)
++|++++|+ ++|++||++. +++ +.+.+.|++|.++... ++++||||++||+|++|++++++.
T Consensus 224 ~~g~~~~di--d~~v~Hqp~~k~~~ka~~ril~~~~~~~~~~l~~~~e~~~~---~~~~~GN~~sASi~l~L~~~l~~~- 297 (388)
T 3v4n_A 224 RTGLDFADY--DALAFHIPYTKMGKKALLAKISDQTEAEQERILARYEESII---YSRRVGNLYTGSLYLGLISLLENA- 297 (388)
T ss_dssp HHCCCGGGC--SEEEECCSSHHHHHHHHHHHSTTSCHHHHHHHHHHHHHHTT---TGGGTCCCGGGHHHHHHHHHHHHC-
T ss_pred HhCCCHHHC--CEEEeCCCcchHHHHHHHHHHhcccHHHHHHhCCCHHHHhh---HHHhcCchHHHHHHHHHHHHHHhc-
Confidence 999999997 3999999664 455 6778899999999876 599999999999999999999852
Q ss_pred hcCCCCCCCCCceEEEEeeccchhhhheeeeeccC
Q 047978 283 EEGKATTGEELEWGVLLGFEAGLTVEAIVLRSIPM 317 (320)
Q Consensus 283 ~~g~l~~G~~~d~vll~~~G~G~~~~a~~l~~~~~ 317 (320)
|++++| |++++++||+|++++++.+++.+-
T Consensus 298 --g~~~~G---d~ill~s~GsG~~ae~~~~~v~~~ 327 (388)
T 3v4n_A 298 --TTLTAG---NQIGLFSYGSGAVAEFFTGELVAG 327 (388)
T ss_dssp --SSCCTT---CEEEEEEEETTTEEEEEEEEECTT
T ss_pred --CcCCCC---CEEEEEEecCcceeEEEEEEEccC
Confidence 578999 999999999999999999999864
No 31
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=100.00 E-value=1e-42 Score=319.77 Aligned_cols=285 Identities=21% Similarity=0.281 Sum_probs=229.8
Q ss_pred ceEEccccccCCCcccccccHHHHHhhhcCCchh---HHHHHHHHHhhhcccchHHHHHHHHHHHHHHcCCCCCCcCEEE
Q 047978 6 KFQETQRPQANPANCVYQTDYPDFYFRITSSNHM---TELKEKFKRMYILVPKVPKLGKEAVSKAIKEWGQPISKITHLI 82 (320)
Q Consensus 6 ~~~I~a~~~~lP~~~i~~~e~~~~~~~~~~~~~~---~gi~~~~r~~~~~~e~~~~la~~Aa~~aL~~ag~~~~dId~li 82 (320)
+++|.++++|+|+++++|+++.+.+ ..+.+|+ +||.+ ||++.++++..+|+.+|+++||+++|+++++||.||
T Consensus 2 ~~~I~~~g~~~P~~~~~~~~~~~~~--~~~~~~i~~~~Gi~~--r~~~~~~~~~~~l~~~a~~~al~~ag~~~~~id~vi 77 (317)
T 1hnj_A 2 YTKIIGTGSYLPEQVRTNADLEKMV--DTSDEWIVTRTGIRE--RHIAAPNETVSTMGFEAATRAIEMAGIEKDQIGLIV 77 (317)
T ss_dssp EEEEEEEEEECCSEEEEHHHHHTTS--SCCHHHHHHHHCCCE--EEECCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEE
T ss_pred CcEEEEEEEeCCCceecHHHHHHHh--CCCHHHHHHHhCceE--EEecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 4799999999999999999998765 3344453 45665 778777899999999999999999999999999999
Q ss_pred EEeeCC-CCCCCHHHHHHHHcCCCcc-------hhhhhhh--------hhcCCCCeEEEEEeecccccccCCCCCCchhh
Q 047978 83 SCSVSG-VDMPGADYQLTKLLGLKPS-------VKRVMLT--------AESNAGARVLVVCSEITVGTFRAPSDENLSCL 146 (320)
Q Consensus 83 ~~s~t~-~~~p~~a~~l~~~LGl~~~-------~c~~~l~--------l~~~~~~~~LVv~~e~~s~~~~~~~~~~~~~~ 146 (320)
++|+++ +..|..+.+|+.+||+++. .|+++++ ++++..+++||+++|..+. ..+|++ +
T Consensus 78 ~g~~~~~~~~~~~a~~v~~~lgl~~~~~~~v~~aCas~~~al~~A~~~i~~g~~~~vlv~g~e~~s~-~~~~~d-----~ 151 (317)
T 1hnj_A 78 VATTSATHAFPSAACQIQSMLGIKGCPAFDVAAACAGFTYALSVADQYVKSGAVKYALVVGSDVLAR-TCDPTD-----R 151 (317)
T ss_dssp EECSCCSCSSSCHHHHHHHHHTCCSSCEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECHHH-HSCTTC-----H
T ss_pred EEcCCCCCCCCcHHHHHHHHhCCCCCeEEeeCcccHHHHHHHHHHHHHHHCCCCCEEEEEEechhcc-cCCchh-----c
Confidence 999998 7789999999999999742 3776554 6789999999999999886 445543 3
Q ss_pred hhhhhhccCceEEEEeecCCCCCCCCeeEEeccCc----eecCCCc---ccccccccccc-----eechhHHHHHHHHhh
Q 047978 147 VNRAIVGDGTAALIVGACPDINTERPLFHIVPTAQ----TILPDSE---DAIKGHFRESP-----LIADNIDKFLAESFD 214 (320)
Q Consensus 147 ~~~~~~GDgAaA~ll~~~~~~~~~~~~~~~~~~~~----~~~p~~~---~~~~~~~~~~g-----~~~~~~~~~i~~~l~ 214 (320)
.+..+|||||+|+||++.+..++. ...+.+.+. ...|... .....++.++| +..+.++++++++|+
T Consensus 152 ~~~~~~GdGA~A~vL~~~~~~~i~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~aL~ 229 (317)
T 1hnj_A 152 GTIIIFGDGAGAAVLAASEEPGII--STHLHADGSYGELLTLPNADRVNPENSIHLTMAGNEVFKVAVTELAHIVDETLA 229 (317)
T ss_dssp HHHTTBCCEEEEEEEEEESSCSEE--EEEEEECGGGGGGEECCCCCSSCTTSCCSCEECHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccceeeccccEEEEEEecCCCcee--eEEEEEcCCCCCeEEECCCCCCCCCCCceEEecCHHHHHHHHHHHHHHHHHHHH
Confidence 457899999999999987642211 112222222 1223210 00012244555 234578899999999
Q ss_pred hcCCCCCCCCceEEEEcCCChhHHHHHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCCCCCCc
Q 047978 215 QVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEELE 294 (320)
Q Consensus 215 ~~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d 294 (320)
++|++++|| .+|++||.+.++++.+.+.||++++++.. +..+|||+++|+++++|++++++ |++++| |
T Consensus 230 ~agl~~~di--d~v~~H~~~~~~~d~i~~~lg~~~~~~~~---~~~~~Gn~~~As~~~~L~~~~~~----~~~~~G---~ 297 (317)
T 1hnj_A 230 ANNLDRSQL--DWLVPHQANLRIISATAKKLGMSMDNVVV---TLDRHGNTSAASVPCALDEAVRD----GRIKPG---Q 297 (317)
T ss_dssp HTTCCGGGC--CEEEECCSCHHHHHHHHHHTTCCGGGBCC---CHHHHCBCGGGHHHHHHHHHHHT----TCSCTT---C
T ss_pred HcCCCHHHC--CEEEEcCCCHHHHHHHHHHcCCCHHHhHh---hHhhhCcHHHHHHHHHHHHHHHh----CCCCCC---C
Confidence 999999997 39999999999999999999999999875 48999999999999999999998 999999 9
Q ss_pred eEEEEeeccchhhhheeeee
Q 047978 295 WGVLLGFEAGLTVEAIVLRS 314 (320)
Q Consensus 295 ~vll~~~G~G~~~~a~~l~~ 314 (320)
++++++||+|++|+++++||
T Consensus 298 ~vll~~~G~G~t~~~~~l~~ 317 (317)
T 1hnj_A 298 LVLLEAFGGGFTWGSALVRF 317 (317)
T ss_dssp EEEEEEEETTTEEEEEEEEC
T ss_pred EEEEEEEchhheeEEEEEEC
Confidence 99999999999999999997
No 32
>3sqz_A Putative hydroxymethylglutaryl-COA synthase; thiolase fold, HMG_COA synthase, transferase; HET: COA; 1.20A {Streptococcus mutans} PDB: 3leh_A
Probab=100.00 E-value=5.7e-44 Score=338.46 Aligned_cols=278 Identities=16% Similarity=0.168 Sum_probs=223.5
Q ss_pred ceEEccccccCCCcccccccHHHHHhhhcCCchh-HHHHHHHHHhhhcccchHHHHHHHHHHHHHHcCCCCCCcCEEEEE
Q 047978 6 KFQETQRPQANPANCVYQTDYPDFYFRITSSNHM-TELKEKFKRMYILVPKVPKLGKEAVSKAIKEWGQPISKITHLISC 84 (320)
Q Consensus 6 ~~~I~a~~~~lP~~~i~~~e~~~~~~~~~~~~~~-~gi~~~~r~~~~~~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~ 84 (320)
+++|.+++.|+|+++++|+|+.+.+ +.+++|+ .+++.+.|+++.++|+..+|+++|+++||+++| |+|||+||++
T Consensus 36 ~v~I~~ig~ylP~~~v~n~el~~~~--g~~~~~i~~~~Gi~~r~~a~~~e~~~~La~~Aa~~aL~~ag--~~dId~li~~ 111 (425)
T 3sqz_A 36 RIGIDKIGFTSSQYVLNMKDLAEAR--GEDPQKFSKGLLLNALSIAPITDDVVTLAAGSANEILTAED--KEKIDMVILA 111 (425)
T ss_dssp CEEEEEEEEECCSEEEEHHHHHHHH--TCCHHHHHTTTCCCEEEECCTTSCHHHHHHHHHHTTCCHHH--HHHEEEEEEE
T ss_pred eEEEEEEEEECCCcEEcHHHHHHHh--CCCHHHHHHHcCeEEEEECCCCCCHHHHHHHHHHHHHHhCC--hhhCCEEEEE
Confidence 5999999999999999999999887 5556664 333333378888899999999999999999997 9999999999
Q ss_pred eeCC-CCCCCHHHHHHHHcCCCc-c-------hhhhhhh--------hhcCCCCeEEEEEeecccccccCCCCCCchhhh
Q 047978 85 SVSG-VDMPGADYQLTKLLGLKP-S-------VKRVMLT--------AESNAGARVLVVCSEITVGTFRAPSDENLSCLV 147 (320)
Q Consensus 85 s~t~-~~~p~~a~~l~~~LGl~~-~-------~c~~~l~--------l~~~~~~~~LVv~~e~~s~~~~~~~~~~~~~~~ 147 (320)
|+++ +..|+.+.+|+++||+++ . .|+++++ +++++.++||||++|+.+. ..++.
T Consensus 112 t~t~~~~~ps~a~~v~~~LGl~~~~~~~dv~~aC~gg~~AL~~A~~~i~sg~~~~vLVvgae~~s~-~~~~~-------- 182 (425)
T 3sqz_A 112 TESSVDQSKAGAVYVHSLLGIQPFARSFEMKEAAYSATAALNYAKLHVEKHPDTRVLVLASDIAKY-GIGTP-------- 182 (425)
T ss_dssp CSCCSCSSSCHHHHHHHHTTCCSSCEEEEECCC-CHHHHHHHHHHHHHHHSTTCEEEEEEEEEECC-CTTSG--------
T ss_pred ecccccccchHHHHHHHHhCCCCCeeEEEEcCHhHHHHHHHHHHHHHHHcCCCCeEEEEEEehhcc-cCCCC--------
Confidence 9999 889999999999999986 2 3777655 6789999999999999986 33321
Q ss_pred hhhhhccCceEEEEeecCCCCCCCCeeEEecc--Cc------eecCCCcccccccccccc-----eechhHHHHHHHHhh
Q 047978 148 NRAIVGDGTAALIVGACPDINTERPLFHIVPT--AQ------TILPDSEDAIKGHFRESP-----LIADNIDKFLAESFD 214 (320)
Q Consensus 148 ~~~~~GDgAaA~ll~~~~~~~~~~~~~~~~~~--~~------~~~p~~~~~~~~~~~~~g-----~~~~~~~~~i~~~l~ 214 (320)
...+|||||+|+||++++.. +.+... +. .+.|.... ++.++| ++.+.++++++++|+
T Consensus 183 ~~~lfGDGA~A~ll~~~~~i------l~~~~~s~~~~~d~~df~~p~~~~----~~~~dG~~~~~~~~~~l~~~~~~~l~ 252 (425)
T 3sqz_A 183 GESTQGAGSIAMLVKKDPRI------LILHDETLAQTRDIMDFWRPNYTT----TPYVNGMYSTKQYLDMLKTTWAEYQK 252 (425)
T ss_dssp GGGGCEEEEEEEEEEESCSS------EEECSCCEEEECCCCSEECCTTCS----SCEECHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcccceeeEEEeecCCce------EEEEeecccchhhcccccccCCCc----ceeeccHhHHHHHHHHHHHHHHHHHH
Confidence 26899999999999997642 222111 10 12232211 233445 457888999999999
Q ss_pred hcCCCCCCCCceEEEEcCCChh--------HHH-----HHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHHhc
Q 047978 215 QVSLNDHDWNSLFWMMHPIGPA--------VLD-----QIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRS 281 (320)
Q Consensus 215 ~~g~~~~d~~~~~~i~h~~~~~--------~~~-----~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~ 281 (320)
++|++++|+ ++|+|||++.+ +++ .+.+.|++|.++... ++++||||++||+|++|++++++.
T Consensus 253 ~~gl~~~Di--d~~v~Hqp~~k~~~ka~~ril~~~~~~~~~~~l~~~~e~~~~---~~~~~GNt~sASi~l~L~~~l~~~ 327 (425)
T 3sqz_A 253 RFDVSLTDF--AAFCFHLPFPKLALKGFNKIMDKQVPSDLQEKLKVNFEASIL---YSKQIGNIYTGSLFLGLLSLLENS 327 (425)
T ss_dssp HHTCCGGGC--SEEEECCSSHHHHHHHHHHHCCTTSCHHHHHHHHHHHHHHHT---THHHHBCCGGGHHHHHHHHHHHHC
T ss_pred HhCCCHHHC--CEEEECCCcchhHHHHHHHHHhccchHHHHHHhCCCHHHHhh---HHhccCccHHHHHHHHHHHHHHhc
Confidence 999999997 39999997754 333 667888899999877 599999999999999999999861
Q ss_pred hhcCCCCCCCCCceEEEEeeccchhhhheeeeeccC
Q 047978 282 VEEGKATTGEELEWGVLLGFEAGLTVEAIVLRSIPM 317 (320)
Q Consensus 282 ~~~g~l~~G~~~d~vll~~~G~G~~~~a~~l~~~~~ 317 (320)
|++++| |+|++++||+|++..++.+++.+-
T Consensus 328 ---g~l~~G---d~ill~s~GsG~~ae~~s~~v~~~ 357 (425)
T 3sqz_A 328 ---QNLVAG---DKIALFSYGSGAVAEIFTGTLVKG 357 (425)
T ss_dssp ---SSCCTT---CEEEEEEEETTTEEEEEEEEECTT
T ss_pred ---CCCCCC---CEEEEEcccCCcceEEEEEEEccc
Confidence 478999 999999999999999999998764
No 33
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A
Probab=100.00 E-value=5.7e-42 Score=317.04 Aligned_cols=288 Identities=18% Similarity=0.183 Sum_probs=230.0
Q ss_pred ccceEEccccccCCCcccccccHHHHHhhhcCCchh---HHHHHHHHHhhhcccchHHHHHHHHHHHHHHcCCCCCCcCE
Q 047978 4 LGKFQETQRPQANPANCVYQTDYPDFYFRITSSNHM---TELKEKFKRMYILVPKVPKLGKEAVSKAIKEWGQPISKITH 80 (320)
Q Consensus 4 ~~~~~I~a~~~~lP~~~i~~~e~~~~~~~~~~~~~~---~gi~~~~r~~~~~~e~~~~la~~Aa~~aL~~ag~~~~dId~ 80 (320)
|.+++|.++++|+|+++++|+++.+.+ ..+++|+ +||.+ |+++.++++..+|+.+|+++||+++|+++++||.
T Consensus 10 m~~~~I~g~g~~~P~~~~~~~~~~~~~--~~~~~~i~~~~gi~~--r~~~~~~~~~~~la~~A~~~al~~ag~~~~~id~ 85 (335)
T 1u6e_A 10 ARSVGLLSVGAYRPERVVTNDEICQHI--DSSDEWIYTRTGIKT--RRFAADDESAASMATEACRRALSNAGLSAADIDG 85 (335)
T ss_dssp CSCEEEEEEEEECCSEEEEHHHHTTSS--SCCHHHHHHHHCCSE--EEECCTTCCHHHHHHHHHHHHHHHHTCCGGGCCE
T ss_pred CCceEEEEEEEECCCceecHHHHHHHh--CCCHHHHHHhcCCce--EeecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCE
Confidence 356899999999999999999998765 3344553 45655 7777678999999999999999999999999999
Q ss_pred EEEEeeCC-CCCCCHHHHHHHHcCCCcc-------hhhhhhh--------hhcCCCCeEEEEEeecccccccCCCCCCch
Q 047978 81 LISCSVSG-VDMPGADYQLTKLLGLKPS-------VKRVMLT--------AESNAGARVLVVCSEITVGTFRAPSDENLS 144 (320)
Q Consensus 81 li~~s~t~-~~~p~~a~~l~~~LGl~~~-------~c~~~l~--------l~~~~~~~~LVv~~e~~s~~~~~~~~~~~~ 144 (320)
||++|+++ +..|+.+.+|+.+||+++. .|+++++ ++++..+++||+++|..++ +.+|.+
T Consensus 86 vi~~t~~~~~~~~~~a~~v~~~lgl~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLv~g~e~~s~-~~~~~d---- 160 (335)
T 1u6e_A 86 VIVTTNTHFLQTPPAAPMVAASLGAKGILGFDLSAGAAGFGYALGAAADMIRGGGAATMLVVGTEKLSP-TIDMYD---- 160 (335)
T ss_dssp EEEECSCCCCSSSCHHHHHHHHHTCTTSEEEEEECGGGHHHHHHHHHHHHHHHTSCSSEEEEEEEECGG-GCCTTC----
T ss_pred EEEEcCCCCCCCChHHHHHHHHhCCCCCcEeeeccccHHHHHHHHHHHHHHHcCCCCEEEEEEEccccc-ccCccc----
Confidence 99999998 8889999999999999742 3777654 6789999999999999986 555654
Q ss_pred hhhhhhhhccCceEEEEeecCCCCCCCCeeEEeccCc----eecCCCc-------ccccccccccc-----eechhHHHH
Q 047978 145 CLVNRAIVGDGTAALIVGACPDINTERPLFHIVPTAQ----TILPDSE-------DAIKGHFRESP-----LIADNIDKF 208 (320)
Q Consensus 145 ~~~~~~~~GDgAaA~ll~~~~~~~~~~~~~~~~~~~~----~~~p~~~-------~~~~~~~~~~g-----~~~~~~~~~ 208 (320)
+.+..+|||||+|+||++.+..++.. ..+.+.+. ...|... ......+.++| +..+.++++
T Consensus 161 -~~~~~~~gDGA~A~vl~~~~~~~i~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 237 (335)
T 1u6e_A 161 -RGNCFIFADGAAAVVVGETPFQGIGP--TVAGSDGEQADAIRQDIDWITFAQNPSGPRPFVRLEGPAVFRWAAFKMGDV 237 (335)
T ss_dssp -TTTTTTBCEEEEEEEEEECSSCCBCC--CEEEECGGGGGGEEESSCHHHHHTSTTSCCCCEEECHHHHHHHHHHHHHHH
T ss_pred -cccceEeccccEEEEEEecCCCCeeE--EEEEEcCCcccceeecCCccCcCCCccCccceEEEcCHHHHHHHHHHHHHH
Confidence 23578999999999999876422211 12222221 1112110 00001244444 224577889
Q ss_pred HHHHhhhcCCCCCCCCceEEEEcCCChhHHHHHHHHcCCCcc-hhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCC
Q 047978 209 LAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKT-KLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKA 287 (320)
Q Consensus 209 i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e-~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l 287 (320)
++++|+++|++++|| ++|++||.+.++++.+.+.||++++ ++..+ +.+|||+++|++|++|++++++ +++
T Consensus 238 i~~al~~agl~~~dI--d~~~~H~~~~~~~~~~~~~lg~~~~~~~~~~---~~~~Gnt~sAs~~~~L~~~~~~----~~~ 308 (335)
T 1u6e_A 238 GRRAMDAAGVRPDQI--DVFVPHQANSRINELLVKNLQLRPDAVVAND---IEHTGNTSAASIPLAMAELLTT----GAA 308 (335)
T ss_dssp HHHHHHHHTCCGGGC--CEEEECCSCHHHHHHHHHHHTCCTTCEECCT---HHHHCBCGGGHHHHHHHHHHHH----TSS
T ss_pred HHHHHHHcCCCHHHC--CEEEECCCCHHHHHHHHHHcCCCchhhhhhh---hhhhCcHHHHHHHHHHHHHHHc----CCC
Confidence 999999999999997 3999999999999999999999998 77664 8999999999999999999998 899
Q ss_pred CCCCCCceEEEEeeccchhhhheeeeec
Q 047978 288 TTGEELEWGVLLGFEAGLTVEAIVLRSI 315 (320)
Q Consensus 288 ~~G~~~d~vll~~~G~G~~~~a~~l~~~ 315 (320)
++| |++|+++||+|+++++++|||.
T Consensus 309 ~~g---~~~l~~~~G~G~t~~~~vl~~~ 333 (335)
T 1u6e_A 309 KPG---DLALLIGYGAGLSYAAQVVRMP 333 (335)
T ss_dssp CTT---CEEEEEEEETTTEEEEEEEECC
T ss_pred CCC---CEEEEEEEehhheeEEEEEEeC
Confidence 999 9999999999999999999994
No 34
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A
Probab=100.00 E-value=2.2e-41 Score=310.32 Aligned_cols=282 Identities=20% Similarity=0.293 Sum_probs=229.0
Q ss_pred ceEEccccccCCCcccccccHHHHHhhhcCCchh---HHHHHHHHHhhhcccchHHHHHHHHHHHHHHcCCCCCCcCEEE
Q 047978 6 KFQETQRPQANPANCVYQTDYPDFYFRITSSNHM---TELKEKFKRMYILVPKVPKLGKEAVSKAIKEWGQPISKITHLI 82 (320)
Q Consensus 6 ~~~I~a~~~~lP~~~i~~~e~~~~~~~~~~~~~~---~gi~~~~r~~~~~~e~~~~la~~Aa~~aL~~ag~~~~dId~li 82 (320)
+++|.++++|+|+++++|+++.+.+ ..+.+|+ +||.+ |+++.++++..+|+.+|+++||+++|+++++||.||
T Consensus 2 ~~~I~~~g~~~P~~~~~~~~~~~~~--~~~~~~i~~~~gi~~--r~~~~~~~~~~~l~~~a~~~al~~ag~~~~~id~vi 77 (313)
T 1zow_A 2 NVGIKGFGAYAPEKIIDNAYFEQFL--DTSDEWISKMTGIKE--RHWADDDQDTSDLAYEASVKAIADAGIQPEDIDMII 77 (313)
T ss_dssp CEEEEEEEEECCSCEEEGGGGGGTS--SCCHHHHHHHHCCSE--EECCCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEE
T ss_pred ceEEEEEEEECCCccccHHHHHHhc--CCCHHHHHHhhCceE--EEecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 4799999999999999999998765 3334442 45665 677767899999999999999999999999999999
Q ss_pred EEeeCC-CCCCCHHHHHHHHcCCCcc-------hhhhhhh--------hhcCCCCeEEEEEeecccccccCCCCCCchhh
Q 047978 83 SCSVSG-VDMPGADYQLTKLLGLKPS-------VKRVMLT--------AESNAGARVLVVCSEITVGTFRAPSDENLSCL 146 (320)
Q Consensus 83 ~~s~t~-~~~p~~a~~l~~~LGl~~~-------~c~~~l~--------l~~~~~~~~LVv~~e~~s~~~~~~~~~~~~~~ 146 (320)
++++++ +..|+.+.+|+.+||+++. .|+++++ ++++..+++||+++|..+. ..+|.+ +
T Consensus 78 ~~~~~~~~~~~~~a~~v~~~lgl~~~~~~~v~~aCas~~~al~~A~~~i~~g~~~~vLv~g~e~~s~-~~~~~d-----~ 151 (313)
T 1zow_A 78 VATATGDMPFPTVANMLQERLGTGKVASMDQLAACSGFMYSMITAKQYVQSGDYHNILVVGADKLSK-ITDLTD-----R 151 (313)
T ss_dssp EECSSCSCSSSCHHHHHHHHHTCCSCCEEEEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEEGGG-TCCTTC-----H
T ss_pred EEcCCCCCCCCcHHHHHHHHhCCCCCcEEEECCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEccccc-ccCccc-----c
Confidence 999988 7889999999999999742 3776554 6789999999999999886 445654 3
Q ss_pred hhhhhhccCceEEEEeecCCC-CCCCCeeEEeccCc----eecCCCcccccccccccc-----eechhHHHHHHHHhhhc
Q 047978 147 VNRAIVGDGTAALIVGACPDI-NTERPLFHIVPTAQ----TILPDSEDAIKGHFRESP-----LIADNIDKFLAESFDQV 216 (320)
Q Consensus 147 ~~~~~~GDgAaA~ll~~~~~~-~~~~~~~~~~~~~~----~~~p~~~~~~~~~~~~~g-----~~~~~~~~~i~~~l~~~ 216 (320)
.+..+|||||+|+||++.+.. .+. ...+.+.+. ...|.. +..+.++| +..+.++++++++|+++
T Consensus 152 ~~~~~~gdGa~A~vl~~~~~~~~i~--~~~~~~~g~~~~~~~~~~~----~~~~~~~g~~~~~~~~~~~~~~i~~al~~a 225 (313)
T 1zow_A 152 STAVLFGDGAGAVIIGEVSEGRGII--SYEMGSDGTGGKHLYLDKD----TGKLKMNGREVFKFAVRIMGDASTRVVEKA 225 (313)
T ss_dssp HHHTTBCEEEEEEEEEECSTTCEEE--EEEEEECGGGGGGEEECTT----TCCEEECHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cceeeeccceEEEEEEecCCCCcee--EEEEEEcCCCcCeEEecCC----CCeeEeccHHHHHHHHHHHHHHHHHHHHHc
Confidence 358899999999999987642 110 112223222 122221 01233444 23457888999999999
Q ss_pred CCCCCCCCceEEEEcCCChhHHHHHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCCCCCCceE
Q 047978 217 SLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWG 296 (320)
Q Consensus 217 g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~v 296 (320)
|++++|| ++|++||.+.++++.+.+.||+++++++.+ +.+|||+++|+++++|++++++ +++++| |++
T Consensus 226 gl~~~di--d~~~~H~~~~~~~d~~~~~lg~~~~~~~~~---~~~~Gh~~~as~~~~L~~~~~~----~~~~~g---~~v 293 (313)
T 1zow_A 226 NLTSDDI--DLFIPHQANIRIMESARERLGISKDKMSVS---VNKYGNTSAASIPLSIDQELKN----GKLKDD---DTI 293 (313)
T ss_dssp TCCGGGC--SEEEECCSCHHHHHHHHHHHTCCGGGBCCC---HHHHCBCGGGHHHHHHHHHHHT----TCCCTT---CEE
T ss_pred CCCHHHC--CEEEEcCCCHHHHHHHHHHhCCCHHHHHHh---HhhhCchHHHHHHHHHHHHHHc----CCCCCC---CEE
Confidence 9999997 399999999999999999999999999864 8999999999999999999998 999999 999
Q ss_pred EEEeeccchhhhheeeeec
Q 047978 297 VLLGFEAGLTVEAIVLRSI 315 (320)
Q Consensus 297 ll~~~G~G~~~~a~~l~~~ 315 (320)
|+++||+|++|+++++||.
T Consensus 294 l~~~~G~G~t~~~~~l~~~ 312 (313)
T 1zow_A 294 VLVGFGGGLTWGAMTIKWG 312 (313)
T ss_dssp EEEEEETTTEEEEEEEECC
T ss_pred EEEEEchhhhheEEEEEeC
Confidence 9999999999999999984
No 35
>2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A*
Probab=100.00 E-value=8.4e-42 Score=327.36 Aligned_cols=283 Identities=16% Similarity=0.135 Sum_probs=223.0
Q ss_pred ceEEccccccCCCcccccccHHHHHhhhcCCchh-HHHHHHHHHhhhcccchHHHHHHHHHHHHHHcCCCCCCcCEEEEE
Q 047978 6 KFQETQRPQANPANCVYQTDYPDFYFRITSSNHM-TELKEKFKRMYILVPKVPKLGKEAVSKAIKEWGQPISKITHLISC 84 (320)
Q Consensus 6 ~~~I~a~~~~lP~~~i~~~e~~~~~~~~~~~~~~-~gi~~~~r~~~~~~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~ 84 (320)
+++|.+++.|+|+++++|+|+.+.. +.+.+|+ ++++.+.|+++.++++..+|+++|+++||+++|++|++||+||++
T Consensus 3 ~v~I~~ig~y~P~~~v~~~~l~~~~--g~~~~~~~~g~G~~~~~~~~~~e~~~~La~~Aa~~aL~~agi~~~~Id~li~~ 80 (450)
T 2f82_A 3 NVGILAMDIYFPPTCVQQEALEAHD--GASKGKYTIGLGQDCLAFCTELEDVISMSFNAVTSLLEKYKIDPKQIGRLEVG 80 (450)
T ss_dssp SCEEEEEEEECCSEEEEHHHHHHHT--TCCTTTTTTTSCCCEEECCCTTCCHHHHHHHHHHHHHHHTTCCGGGEEEEEEE
T ss_pred ceEEEEEEEECCCeeccHHHHHHHh--CCCHHHhhhhhCceeeeeCCCCCCHHHHHHHHHHHHHHHcCcCHHHCCEEEEE
Confidence 5899999999999999999999886 4566664 566553355566789999999999999999999999999999999
Q ss_pred eeCC-CCCCCHHHHHHHHcCC---Ccc-------hhhhhhh--------hhcCCC--CeEEEEEeecccccccCCCCCCc
Q 047978 85 SVSG-VDMPGADYQLTKLLGL---KPS-------VKRVMLT--------AESNAG--ARVLVVCSEITVGTFRAPSDENL 143 (320)
Q Consensus 85 s~t~-~~~p~~a~~l~~~LGl---~~~-------~c~~~l~--------l~~~~~--~~~LVv~~e~~s~~~~~~~~~~~ 143 (320)
|+++ +..|+.+.+|+++||+ ++. .|+++++ ++++.. ++||||++|..+. .++
T Consensus 81 t~t~~~~~p~~a~~v~~~lgl~g~~~~~~~~v~~aC~gg~~AL~~A~~~I~sg~~~~~~vLVvg~e~~~~-----~~~-- 153 (450)
T 2f82_A 81 SETVIDKSKSIKTFLMQLFEKCGNTDVEGVDSTNACYGGTAALLNCVNWVESNSWDGRYGLVICTDSAVY-----AEG-- 153 (450)
T ss_dssp CCCCSCSSSCHHHHHTHHHHTTTCCCCBCCEECSGGGHHHHHHHHHHHHHHSTTCCSCEEEEEEEEEECC-----SSS--
T ss_pred ecCCCCCCCcHHHHHHHHhCCcCCCCceEEEhhhhhHHHHHHHHHHHHHHHcCCCcCCeEEEEEeeeccc-----cCC--
Confidence 9999 8899999999999999 332 3777654 677875 9999999998752 221
Q ss_pred hhhhhhhhhccCceEEEEeecCCCCCCCCeeEEeccCc-------eecCCCcccccccccccc-----eechhHHHHHHH
Q 047978 144 SCLVNRAIVGDGTAALIVGACPDINTERPLFHIVPTAQ-------TILPDSEDAIKGHFRESP-----LIADNIDKFLAE 211 (320)
Q Consensus 144 ~~~~~~~~~GDgAaA~ll~~~~~~~~~~~~~~~~~~~~-------~~~p~~~~~~~~~~~~~g-----~~~~~~~~~i~~ 211 (320)
....+|||||+|+||++++.. .++....+. ...|.... .++.++| .+.+.++++++.
T Consensus 154 ---~~~~~fGDGA~A~ll~~~~~~-----~~~~~~~g~~~~~~~d~~~p~~~~---~~~~~~G~~~~~~~~~~l~~~~~~ 222 (450)
T 2f82_A 154 ---PARPTGGAAAIAMLIGPDAPI-----VFESKLRGSHMAHVYDFYKPNLAS---EYPVVDGKLSQTCYLMALDSCYKH 222 (450)
T ss_dssp ---TTGGGCEEEEEEEEEESSCSE-----EEEEEEEEEEECCCCSEECCCTTC---SCCEECHHHHHHHHHHHHHHHHHH
T ss_pred ---CCCcccccceEEEEeccCCce-----EEEeccceeehhhccceeeeCCCC---CceeecCccHHHHHHHHHHHHHHH
Confidence 247899999999999987541 122211111 12232110 1234445 334677888888
Q ss_pred Hhh------hcCCCCCCCCceEEEEcCCChhHHHHHHHHcC------------------CCc---------------chh
Q 047978 212 SFD------QVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLG------------------LEK---------------TKL 252 (320)
Q Consensus 212 ~l~------~~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg------------------~~~---------------e~~ 252 (320)
+++ ++|++++|+ ++|++||+|.++++.+.++|+ +|+ ||+
T Consensus 223 ~l~~~~~~~~agl~~~di--d~~v~Hq~~~~i~~~~~~~L~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ek~ 300 (450)
T 2f82_A 223 LCNKFEKLEGKEFSINDA--DYFVFHSPYNKLVQKSFARLLYNDFLRNASSIDEAAKEKFTPYSSLSLDESYQSRDLEKV 300 (450)
T ss_dssp HHHHHHHHHSSCCCGGGC--SEEEECCSSHHHHHHHHHHHHHHHHHTTCTTCCHHHHHHHGGGTTCCHHHHHTCHHHHHH
T ss_pred HHHHhhhccccCCChhhc--CEEEecCChHHHHHHHHHHhcccccccccccccccccccccccccccccccccchhHHHH
Confidence 886 889999987 399999999999999999998 454 443
Q ss_pred h-------------hhHHHHhccCCcccchHHHHHHHHHHhchhcCC-CCCCCCCceEEEEeeccchhhhheeeeeccC
Q 047978 253 R-------------ETRHVLSEYGNMASATVLFVLDEMRKRSVEEGK-ATTGEELEWGVLLGFEAGLTVEAIVLRSIPM 317 (320)
Q Consensus 253 ~-------------~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~-l~~G~~~d~vll~~~G~G~~~~a~~l~~~~~ 317 (320)
+ .++.++++||||++||+|++|++++++ ++ +++| |+|+++|||+|+++++++++|.+-
T Consensus 301 ~~~~~~~~~~~k~~~s~~~~~~~GN~~saSi~l~L~~~l~~----~~~~~~G---d~ill~s~GsG~~~~~~~l~~~~~ 372 (450)
T 2f82_A 301 SQQLAKTYYDAKVQPTTLVPKQVGNMYTASLYAAFASLVHN----KHSDLAG---KRVVMFSYGSGSTATMFSLRLCEN 372 (450)
T ss_dssp HHHHHHHHHHHHTGGGCHHHHHHCCCGGGHHHHHHHHHHHH----HGGGCTT---CEEEEEEEETTTEEEEEEEEECCC
T ss_pred HhhhhHHHHHHhhhHHHHHHHhcCchHHHHHHHHHHHHHHh----CccCCCC---CEEEEEeecCCcccEEEEEEEeCC
Confidence 3 333468999999999999999999998 74 8899 999999999999999999999864
No 36
>2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.5e-41 Score=324.47 Aligned_cols=286 Identities=16% Similarity=0.117 Sum_probs=218.0
Q ss_pred ceEEccccccCCCcccccccHHHHHhhhcCCchh---HHHHHHHHHhhhcccchHHHHHHHHHHHHHHcCCCCCCcCEEE
Q 047978 6 KFQETQRPQANPANCVYQTDYPDFYFRITSSNHM---TELKEKFKRMYILVPKVPKLGKEAVSKAIKEWGQPISKITHLI 82 (320)
Q Consensus 6 ~~~I~a~~~~lP~~~i~~~e~~~~~~~~~~~~~~---~gi~~~~r~~~~~~e~~~~la~~Aa~~aL~~ag~~~~dId~li 82 (320)
+++|.++++|+|+++++|+|+.+.. +.+.+++ +|+.+ |+++.++++..+|+++|+++||+++|++|+|||+||
T Consensus 24 ~vgI~aig~y~P~~~v~~~el~~~~--g~~~~~~~~~~Gi~~--r~~~~~~e~~~~La~~Aa~~aL~~agi~~~dId~li 99 (478)
T 2p8u_A 24 DVGIVALEIYFPSQYVDQAELEKYD--GVDAGKYTIGLGQAK--MGFCTDREDINSLCMTVVQNLMERNNLSYDCIGRLE 99 (478)
T ss_dssp CCEEEEEEEECCSEEEEHHHHHHHH--TCCTTCCCCCCCCCE--EECCCTTCCHHHHHHHHHHHHHHHTTCCGGGEEEEE
T ss_pred ceEEEEEEEECCCeEecHHHHHHHh--CCChhHhecccCceE--EEeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 5899999999999999999999887 4555653 45655 777777899999999999999999999999999999
Q ss_pred EEeeCC-CCCCCHHHHHHHH---cCCCcc-------hhhhhhh--------hhcCC--CCeEEEEEeecccccccCCCCC
Q 047978 83 SCSVSG-VDMPGADYQLTKL---LGLKPS-------VKRVMLT--------AESNA--GARVLVVCSEITVGTFRAPSDE 141 (320)
Q Consensus 83 ~~s~t~-~~~p~~a~~l~~~---LGl~~~-------~c~~~l~--------l~~~~--~~~~LVv~~e~~s~~~~~~~~~ 141 (320)
++|+++ +..|+.+.+|++. ||+++. .|+++++ +++++ .++||||++|... +. ++
T Consensus 100 ~~T~t~~~~~ps~a~~v~~~L~~lG~~~~~~~dv~~aC~gg~~AL~~A~~~i~sg~~~~~~aLVV~~Eia~--~~---~~ 174 (478)
T 2p8u_A 100 VGTETIIDKSKSVKTNLMQLFEESGNTDIEGIDTTNACYGGTAAVFNAVNWIESSSWDGRYALVVAGDIAV--YA---TG 174 (478)
T ss_dssp EECSCCSCSSSCHHHHHGGGTTTTTCCCCBCCEEESGGGHHHHHHHHHHHHHTSTTCCSCEEEEEEEEEEC--CC---SS
T ss_pred EEccCCcccCccHHHHHHHHHhhcCCCCceEEEEcchhHHHHHHHHHHHHHHHcCCccCCEEEEEEeeeec--cc---CC
Confidence 999999 7899999999954 455542 3877654 67888 8999999999642 32 21
Q ss_pred CchhhhhhhhhccCceEEEEeecCCCCCCCC--eeEEeccCceecCCCcccccccccccc-e-------echhHHHHHHH
Q 047978 142 NLSCLVNRAIVGDGTAALIVGACPDINTERP--LFHIVPTAQTILPDSEDAIKGHFRESP-L-------IADNIDKFLAE 211 (320)
Q Consensus 142 ~~~~~~~~~~~GDgAaA~ll~~~~~~~~~~~--~~~~~~~~~~~~p~~~~~~~~~~~~~g-~-------~~~~~~~~i~~ 211 (320)
.+..+|||||+|+||++++...+... ............|.... .++.++| + ..+..++.+++
T Consensus 175 -----~~~~~fGdGA~A~Ll~~~~~~~l~~~~~gs~~~~~~d~~~p~~~~---~~~~~dG~~s~~~y~~a~~~~~~~~~~ 246 (478)
T 2p8u_A 175 -----NARPTGGVGAVALLIGPNAPLIFERGLRGTHMQHAYDFYKPDMLS---EYPIVDGKLSIQCYLSALDRCYSVYCK 246 (478)
T ss_dssp -----TTGGGCEEEEEEEEEESSCSEEECTTCCEEEECCCCSEECCCTTC---SSCEECHHHHHHHHHHHHHHHHHHHHH
T ss_pred -----CCCCcccceeEEEEEecCCCceEeeccceecccchhheeeecCCC---cceEEcCcchHHHHHHHHHHHHHHHHH
Confidence 24689999999999998754211110 00010011123343111 1233444 1 12333455666
Q ss_pred Hhh--------hcCCCCCCCCceEEEEcCCChhHHHHHHHHcC------------------------CCc---------c
Q 047978 212 SFD--------QVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLG------------------------LEK---------T 250 (320)
Q Consensus 212 ~l~--------~~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg------------------------~~~---------e 250 (320)
.++ ++|++++|+ ++|++||++.++++.+.+.|+ +|+ |
T Consensus 247 ~l~~~~~~~~~~~g~~~~di--d~~v~H~~~~ki~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~e 324 (478)
T 2p8u_A 247 KIHAQWQKEGNDKDFTLNDF--GFMIFHSPYCKLVQKSLARMLLNDFLNDQNRDKNSIYSGLEAFGDVKLEDTYFDRDVE 324 (478)
T ss_dssp HHHHHHHHHTCCCCCCGGGC--SEEEECCSSHHHHHHHHHHHHHHHHHHCTTGGGSGGGTTCGGGTTCCGGGCTTCHHHH
T ss_pred HHhhhccccccccCCChHHc--CEEEecCCcHHHHHHHHHHhCcccccccccccccccccccchhccCChhhcccchhHH
Confidence 665 678999887 399999999999999999998 676 5
Q ss_pred -------------hhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCC--CCCCCCCceEEEEeeccchhhhheeeeec
Q 047978 251 -------------KLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGK--ATTGEELEWGVLLGFEAGLTVEAIVLRSI 315 (320)
Q Consensus 251 -------------~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~--l~~G~~~d~vll~~~G~G~~~~a~~l~~~ 315 (320)
|+..++.++++||||++||++++|++++++ ++ +++| |+|+++|||+|+++++++++|.
T Consensus 325 k~~~~~~~~~~~~k~~~~~~~~~~~GN~~saSi~l~L~~ll~~----~~~~~~~G---drill~s~GsG~~~~~~~l~~~ 397 (478)
T 2p8u_A 325 KAFMKASSELFSQKTKASLLVSNQNGNMYTSSVYGSLASVLAQ----YSPQQLAG---KRIGVFSYGSGLAATLYSLKVT 397 (478)
T ss_dssp HHHHHHTHHHHHHHTTGGGHHHHHHCCCGGGHHHHHHHHHHHH----SCHHHHTT---CEEEEEEEETTTEEEEEEEEEC
T ss_pred HHHHHHhHHHHHHhHHHHHHHHHhcCchHHHHHHHHHHHHHHh----CCccCCCC---CEEEEEEEcchhhhEEEEEEEe
Confidence 544455579999999999999999999998 87 8899 9999999999999999999998
Q ss_pred cC
Q 047978 316 PM 317 (320)
Q Consensus 316 ~~ 317 (320)
+-
T Consensus 398 ~~ 399 (478)
T 2p8u_A 398 QD 399 (478)
T ss_dssp SC
T ss_pred CC
Confidence 64
No 37
>1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A*
Probab=100.00 E-value=9.8e-42 Score=322.21 Aligned_cols=278 Identities=14% Similarity=0.116 Sum_probs=224.0
Q ss_pred ceEEccccccCCCcccccccHHHHHhhhcCCchh---HHHHHHHHHhhhcccchHHHHHHHHHHHHHHcCCCCCCcCEEE
Q 047978 6 KFQETQRPQANPANCVYQTDYPDFYFRITSSNHM---TELKEKFKRMYILVPKVPKLGKEAVSKAIKEWGQPISKITHLI 82 (320)
Q Consensus 6 ~~~I~a~~~~lP~~~i~~~e~~~~~~~~~~~~~~---~gi~~~~r~~~~~~e~~~~la~~Aa~~aL~~ag~~~~dId~li 82 (320)
+++|.++++|+|+++++|+|+.+.. +.+++|+ +||.+ |+++.++++..+|+++|+++||++ ++|++||.||
T Consensus 2 ~v~I~~ig~y~P~~~v~~~~l~~~~--~~~~~~i~~~~Gi~~--r~~~~~~e~~~~la~~Aa~~aL~~--~~~~~Id~li 75 (396)
T 1xpm_A 2 AIGIDKINFYVPKYYVDMAKLAEAR--QVDPNKFLIGIGQTE--MAVSPVNQDIVSMGANAAKDIITD--EDKKKIGMVI 75 (396)
T ss_dssp CEEEEEEEEECCSEEEEHHHHHHHT--TSCHHHHHTTTCCSE--EEECCTTCCHHHHHHHHHHTTCCH--HHHHHEEEEE
T ss_pred ceEEEEEEEeCCCeEecHHHHHHHh--CCCHHHHhhhcCceE--EEeCCCCCCHHHHHHHHHHHHHhc--CCHHHCCEEE
Confidence 4899999999999999999999876 4555663 45665 888878999999999999999998 6899999999
Q ss_pred EEeeCC-CCCCCHHHHHHHHcCCCcc--------hhhhhhh--------hhcCCCCeEEEEEeecccccccCCCCCCchh
Q 047978 83 SCSVSG-VDMPGADYQLTKLLGLKPS--------VKRVMLT--------AESNAGARVLVVCSEITVGTFRAPSDENLSC 145 (320)
Q Consensus 83 ~~s~t~-~~~p~~a~~l~~~LGl~~~--------~c~~~l~--------l~~~~~~~~LVv~~e~~s~~~~~~~~~~~~~ 145 (320)
++|+++ +..|+.+.+|+.+||+++. .|+++++ +++++.+++||+++|..+. ..++
T Consensus 76 ~~t~~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~aC~sg~~Al~~A~~~I~sg~~~~vLvvg~e~s~~-~~~~------- 147 (396)
T 1xpm_A 76 VATESAVDAAKAAAVQIHNLLGIQPFARCFEMKEACYAATPAIQLAKDYLATRPNEKVLVIATDTARY-GLNS------- 147 (396)
T ss_dssp EECSSCSBSSSCHHHHHHHHTTCCSSCEEEEEESTTTTHHHHHHHHHHHHTTCTTCEEEEEEEEEECC-CTTC-------
T ss_pred EEeCCCCCCCCCHHHHHHHHhCCCCCceEEEeccccHHHHHHHHHHHHHHHcCCCCEEEEEeehhhcc-ccCC-------
Confidence 999999 7899999999999999852 3776654 7889999999999997332 2221
Q ss_pred hhhhhhhccCceEEEEeecCCCCCCCCeeEEec-cCc-------eecCCCcccccccccccc-----eechhHHHHHHHH
Q 047978 146 LVNRAIVGDGTAALIVGACPDINTERPLFHIVP-TAQ-------TILPDSEDAIKGHFRESP-----LIADNIDKFLAES 212 (320)
Q Consensus 146 ~~~~~~~GDgAaA~ll~~~~~~~~~~~~~~~~~-~~~-------~~~p~~~~~~~~~~~~~g-----~~~~~~~~~i~~~ 212 (320)
....+|||||+|+||++++.. +.+.. .+. .+.|.... .+.++| ++.+.++++++++
T Consensus 148 -~~~~~~GdGA~A~vl~~~~~i------~~~~~~~g~~~~d~~~~~~p~~~~----~~~~~G~~~~~~~~~~~~~~~~~~ 216 (396)
T 1xpm_A 148 -GGEPTQGAGAVAMVIAHNPSI------LALNEDAVAYTEDVYDFWRPTGHK----YPLVDGALSKDAYIRSFQQSWNEY 216 (396)
T ss_dssp -SSGGGCEEEEEEEEEEESCSS------EEECSCCEEEECCCCSEECBTTCS----SCEECHHHHHHHHHHHHHHHHHHH
T ss_pred -CCCcccccceEEEEeccCCce------EEEEeccccccceEEEeeccCCCC----CeEEEcHHHHHHHHHHHHHHHHHH
Confidence 147899999999999986431 22211 111 11232211 234455 3456788999999
Q ss_pred hhhcCCCCCCCCceEEEEcCCChhHHHHHHHHc-----CCCcchhhhh----HHHHhccCCcccchHHHHHHHHHHhchh
Q 047978 213 FDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKL-----GLEKTKLRET----RHVLSEYGNMASATVLFVLDEMRKRSVE 283 (320)
Q Consensus 213 l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~~~l-----g~~~e~~~~~----~~~~~~~Gn~~sasi~~~L~~~~~~~~~ 283 (320)
|+++|++++|| ++|++||+|.++++.+.+.+ +++++++..+ +...++||||++||+|++|++++++
T Consensus 217 L~~agl~~~di--d~~~~H~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~s~~~~~~~GN~~saSi~l~L~~~l~~--- 291 (396)
T 1xpm_A 217 AKRQGKSLADF--ASLCFHVPFTKMGKKALESIIDNADETTQERLRSGYEDAVDYNRYVGNIYTGSLYLSLISLLEN--- 291 (396)
T ss_dssp HHHHTCCGGGC--SEEEECCSSHHHHHHHHHTTGGGSCHHHHHHHHHHHHHHTTGGGGTCCCGGGHHHHHHHHHHHH---
T ss_pred HHHcCCCHHHC--CEEEecCCchHHHHHHHHHHHhhcccCCHHHHHHHhhhhhhhhhhcCchHHHHHHHHHHHHHHc---
Confidence 99999999987 39999999999999999998 8998888653 1112999999999999999999998
Q ss_pred cCCCCCCCCCceEEEEeeccchhhhheeeeeccC
Q 047978 284 EGKATTGEELEWGVLLGFEAGLTVEAIVLRSIPM 317 (320)
Q Consensus 284 ~g~l~~G~~~d~vll~~~G~G~~~~a~~l~~~~~ 317 (320)
+++++| |+|+++|||+|++++++++++.|-
T Consensus 292 -~~l~~G---d~ill~s~GsG~~~~~~~~~v~~~ 321 (396)
T 1xpm_A 292 -RDLQAG---ETIGLFSYGSGSVGEFYSATLVEG 321 (396)
T ss_dssp -SCCCTT---CEEEEEEEETTTEEEEEEEEECTT
T ss_pred -CCCCCC---CEEEEEEECcchhheEEEEEEccc
Confidence 999999 999999999999999999999864
No 38
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=100.00 E-value=4.8e-41 Score=309.26 Aligned_cols=285 Identities=20% Similarity=0.261 Sum_probs=229.0
Q ss_pred eEEccccccCCCcccccccHHHHHhhhcCCchh---HHHHHHHHHhhhcccchHHHHHHHHHHHHHHcCCCCCCcCEEEE
Q 047978 7 FQETQRPQANPANCVYQTDYPDFYFRITSSNHM---TELKEKFKRMYILVPKVPKLGKEAVSKAIKEWGQPISKITHLIS 83 (320)
Q Consensus 7 ~~I~a~~~~lP~~~i~~~e~~~~~~~~~~~~~~---~gi~~~~r~~~~~~e~~~~la~~Aa~~aL~~ag~~~~dId~li~ 83 (320)
++|.++++|+|+++++|+++.+.+ ..+.+|+ +||.+ ||++.++++..+|+.+|+++||+++|+++++||.||+
T Consensus 2 ~~I~~~g~~~P~~~~~~~~~~~~~--~~~~~~i~~~~Gi~~--r~~~~~~~~~~~la~~a~~~al~~ag~~~~~id~vi~ 77 (322)
T 1ub7_A 2 SGILALGAYVPERVMTNADFEAYL--DTSDEWIVTRTGIKE--RRVAAEDEYTSDLAFKAVEDLLRRHPGALEGVDAVIV 77 (322)
T ss_dssp CEEEEEEEECCSEEEEHHHHHTTS--SCCHHHHHHHTCCCE--EEECCTTCCHHHHHHHHHHHHHHHSTTTTTTEEEEEE
T ss_pred cEEEEEEEECCCceecHHHHHHHh--CCCHHHHHHhcCceE--EeecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 689999999999999999998765 3344553 45665 7887778999999999999999999999999999999
Q ss_pred EeeCC-CCCCCHHHHHHHHcCCCcc------hhhhhhh--------hhcCCCCeEEEEEeecccccccCCCCCCchhhhh
Q 047978 84 CSVSG-VDMPGADYQLTKLLGLKPS------VKRVMLT--------AESNAGARVLVVCSEITVGTFRAPSDENLSCLVN 148 (320)
Q Consensus 84 ~s~t~-~~~p~~a~~l~~~LGl~~~------~c~~~l~--------l~~~~~~~~LVv~~e~~s~~~~~~~~~~~~~~~~ 148 (320)
+|+++ +..|+.+.+|+.+||++.. .|+++++ ++++..+++||+++|..++ +.+|.| +.+
T Consensus 78 ~~~~~~~~~~~~a~~v~~~lgl~~~~~~v~~aCas~~~al~~A~~~i~~g~~~~vlv~g~e~~s~-~~~~~d-----~~~ 151 (322)
T 1ub7_A 78 ATNTPDALFPDTAALVQARFGLKAFAYDLLAGCPGWIYALAQAHALVEAGLAQKVLAVGAEALSK-IIDWND-----RAT 151 (322)
T ss_dssp ECSSCSEEESCHHHHHHHHTTCCCEEEEEECSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGGG-TSCTTC-----HHH
T ss_pred EcCCCCCCCCcHHHHHHHHhCCCCEEEeeCccchHHHHHHHHHHHHHHcCCCCEEEEEEechhcc-ccChhh-----ccc
Confidence 99988 6789999999999999422 3776544 7789999999999999886 555544 346
Q ss_pred hhhhccCceEEEEeecCCC-CCCCCeeEEeccCc----eec-------CCCcccccccccccc-----eechhHHHHHHH
Q 047978 149 RAIVGDGTAALIVGACPDI-NTERPLFHIVPTAQ----TIL-------PDSEDAIKGHFRESP-----LIADNIDKFLAE 211 (320)
Q Consensus 149 ~~~~GDgAaA~ll~~~~~~-~~~~~~~~~~~~~~----~~~-------p~~~~~~~~~~~~~g-----~~~~~~~~~i~~ 211 (320)
..+|||||+|+||++.+.. ++. ...+.+.+. ... |...+ -..++.++| +..+.+++++++
T Consensus 152 ~~~~GdGA~A~vL~~~~~~~~i~--~~~~~~~g~~~~~~~~~~~~~~~p~~~~-~~~~~~~~g~~~~~~~~~~~~~~i~~ 228 (322)
T 1ub7_A 152 AVLFGDGGGAAVVGKVREGYGFR--SFVLGADGTGAKELYHACVAPRLPDGTS-MKNRLYMNGREVFKFAVRVMNTATLE 228 (322)
T ss_dssp HTTBCCEEEEEEEECCCTTCEEE--EEEEEECGGGCTTEEEESSCSBCTTSCB-CCSSCEECHHHHHHHHHHHHHHHHHH
T ss_pred ceeeccccEEEEEEecCCCCcee--EEEEEEecCCCCeEEeCCCCCCCCcccc-ccceEEecCHHHHHHHHHHHHHHHHH
Confidence 7899999999999987542 110 011222221 112 22111 011244555 334678899999
Q ss_pred HhhhcCCCCCCCCceEEEEcCCChhHHHHHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCCCC
Q 047978 212 SFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGE 291 (320)
Q Consensus 212 ~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~ 291 (320)
+|+++|++++|| +++++||.+.++++.+.+.||++++++.. ++.+|||+++|+++++|.+++++ |++++|
T Consensus 229 al~~agl~~~di--d~~~~H~~~~~~~d~~~~~lg~~~~~~~~---~~~~~Gh~~~As~~~~l~~~l~~----g~~~~g- 298 (322)
T 1ub7_A 229 AIEKAGLTPEDI--RLFVPHQANLRIIDAARERLGLPWERVAV---NVDRYGNTSTASIPLALKEAVDA----GRIREG- 298 (322)
T ss_dssp HHHHHTCCGGGC--SEEEECCSCHHHHHHHHHTTTCCGGGBCC---CHHHHCBCGGGHHHHHHHHHHHH----TSSCTT-
T ss_pred HHHHcCCCHHHC--CEEEEcCCCHHHHHHHHHHcCCCHHHHHH---HHHhhCcHHHHHHHHHHHHHHHh----CCCCCC-
Confidence 999999999997 39999999999999999999999999876 48899999999999999999998 999999
Q ss_pred CCceEEEEeeccchhhhheeeeecc
Q 047978 292 ELEWGVLLGFEAGLTVEAIVLRSIP 316 (320)
Q Consensus 292 ~~d~vll~~~G~G~~~~a~~l~~~~ 316 (320)
+++++.+||.|++++++++||++
T Consensus 299 --~~~l~~~~G~G~~~~~~vl~~~~ 321 (322)
T 1ub7_A 299 --DHVLLVSFGAGLTWAAAVLTWGG 321 (322)
T ss_dssp --CEEEEEEEETTTEEEEEEEECCC
T ss_pred --CEEEEEEEChhheeEEEEEEeCC
Confidence 99999999999999999999954
No 39
>2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.3e-41 Score=326.94 Aligned_cols=291 Identities=13% Similarity=0.116 Sum_probs=217.4
Q ss_pred CcccceEEccccccCCCcccccccHHHHHhhhcCCchh---HHHHHHHHHhhhcccchHHHHHHHHHHHHHHcCCCCCCc
Q 047978 2 ALLGKFQETQRPQANPANCVYQTDYPDFYFRITSSNHM---TELKEKFKRMYILVPKVPKLGKEAVSKAIKEWGQPISKI 78 (320)
Q Consensus 2 ~~~~~~~I~a~~~~lP~~~i~~~e~~~~~~~~~~~~~~---~gi~~~~r~~~~~~e~~~~la~~Aa~~aL~~ag~~~~dI 78 (320)
+|-++|+|.++|.|+|+++++|+|+.+.. +.+++|+ +||.+ ||++.++|++++||++|+++||+++|++|+||
T Consensus 1 sm~~~VgI~~~g~y~P~~~v~~~~l~~~~--~~~~~~i~~~~Gi~~--r~~~~~~E~~~~ma~~Aa~~al~~a~i~~~~I 76 (460)
T 2wya_A 1 SMPKDVGILALEVYFPAQYVDQTDLEKYN--NVEAGKYTVGLGQTR--MGFCSVQEDINSLCLTVVQRLMERIQLPWDSV 76 (460)
T ss_dssp CCCSSCEEEEEEEECCSEEEEHHHHHHHT--TCCTTCCCCCCCCCE--EECCCTTCCHHHHHHHHHHHHHHHHTCCGGGE
T ss_pred CCCCceEEEEEEEECCCeEEcHHHHHHHh--CCCHHHHHHhhCcEE--EEECCCCCCHHHHHHHHHHHHHHHcCCCHHHC
Confidence 45678999999999999999999999886 6777774 45665 89999999999999999999999999999999
Q ss_pred CEEEEEeeCC-CCCCCHHHHHHHHcCCCc----------chhhhhhh--------hhcCCCCe--EEEEEeecccccccC
Q 047978 79 THLISCSVSG-VDMPGADYQLTKLLGLKP----------SVKRVMLT--------AESNAGAR--VLVVCSEITVGTFRA 137 (320)
Q Consensus 79 d~li~~s~t~-~~~p~~a~~l~~~LGl~~----------~~c~~~l~--------l~~~~~~~--~LVv~~e~~s~~~~~ 137 (320)
|+||++|+|+ +..|++++.|+++||+.. ..|.||++ ++++..++ +++++++.. +
T Consensus 77 d~ii~aT~t~~~~~ps~a~~v~~~l~~~g~~~~~a~D~~~aC~g~~~al~~A~~~i~~g~~~~~lvvv~~s~~~-----~ 151 (460)
T 2wya_A 77 GRLEVGTETIIDKSKAVKTVLMELFQDSGNTDIEGIDTTNACYGGTASLFNAANWMESSSWDGRYAMVVCGDIA-----V 151 (460)
T ss_dssp EEEEEECSCCSCSSSCHHHHHGGGTGGGTCCCCBCCEEESGGGHHHHHHHHHHHHHTSTTCCSCEEEEEEEEEE-----C
T ss_pred CEEEEEeCCCCCCCCchHHHHHHHHhccCCCCeeEechhhhhhhHHHHHHHHHHHHHhccccceEEEEEecccc-----c
Confidence 9999999999 899999999999997532 14888876 66776554 444444432 2
Q ss_pred CCCCCchhhhhhhhhccCceEEEEeecCCCCCCCCeeE--EeccCceecCCCc--cc-cc-----ccccccc-----eec
Q 047978 138 PSDENLSCLVNRAIVGDGTAALIVGACPDINTERPLFH--IVPTAQTILPDSE--DA-IK-----GHFRESP-----LIA 202 (320)
Q Consensus 138 ~~~~~~~~~~~~~~~GDgAaA~ll~~~~~~~~~~~~~~--~~~~~~~~~p~~~--~~-~~-----~~~~~~g-----~~~ 202 (320)
+.+ +.+..+|||||+|++++.++...+...... .........|... .. .+ ....+.| ++.
T Consensus 152 ~~d-----~~~~~~~GdGA~A~l~~~~~~~~~~~~~~~~~~~~~~df~~p~~~s~~~~~dg~~s~~~~~~~g~~v~~~~~ 226 (460)
T 2wya_A 152 YPS-----GNARPTGGAGAVAMLIGPKAPLALERGLRGTHMENVYDFYKPNLASEYPIVDGKLSIQCYLRALDRCYTSYR 226 (460)
T ss_dssp CCS-----STTGGGCEEEEEEEEEESSCSEEECTTCCEEEECCCCSEECCCTTCSCCEECHHHHHHHHHHHHHHHHHHHH
T ss_pred ccc-----ccccccCcchHHhhhcccCCcceeecccccccccchhhhhccCCCCCCcccCCccchHHHHHhhHHHHHHHH
Confidence 323 224678999999999998876421111111 1111112233211 00 11 0122223 345
Q ss_pred hhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHHHHHHcCCC----------------------------------
Q 047978 203 DNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLE---------------------------------- 248 (320)
Q Consensus 203 ~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~---------------------------------- 248 (320)
+.+++.+++++++++++++|+ ++++|||++.++++...++|+++
T Consensus 227 ~~~~~~~~~~l~~~~~~~~d~--d~~v~Hqp~~r~~~k~~~rL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (460)
T 2wya_A 227 KKIQNQWKQAGSDRPFTLDDL--QYMIFHTPFCKMVQKSLARLMFNDFLSASSDTQTSLYKGLEAFGGLKLEDTYTNKDL 304 (460)
T ss_dssp HHHHHHHHHTTCCCCCCGGGC--SEEEECCSSHHHHHHHHHHHHHHHHHHSCHHHHHHHCGGGGGGTTCCGGGGGTCHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHH--hhhhhcccchHHHHHHHHHhcchhhhhcccchhhhhhhhhhhhcCCchhhhhhhhHH
Confidence 677888889999999999997 49999999999988877666432
Q ss_pred ---------------cchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCCCCCCceEEEEeeccchhhhheeee
Q 047978 249 ---------------KTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEAIVLR 313 (320)
Q Consensus 249 ---------------~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~~l~ 313 (320)
.++... ++++||||++||+|++|++++++.. +++++| |+|+|+|||+|++..++.++
T Consensus 305 ~k~~~~~~~~~~~~~~e~~~~---~~~~~GNt~sASiplaL~~ll~~~~--~~~~~G---drIll~~fGSGl~s~~fs~~ 376 (460)
T 2wya_A 305 DKALLKASQDMFDKKTKASLY---LSTHNGNMYTSSLYGCLASLLSHHS--AQELAG---SRIGAFSYGSGLAASFFSFR 376 (460)
T ss_dssp HHHHHHHHHHHHHHHTGGGGH---HHHHHCCCGGGHHHHHHHHHHHHSC--HHHHTT---CEEEEEEEETTTEEEEEEEE
T ss_pred HHHHHHHHHHHhhcchhhhhh---HHHhhCCcchhhHHHHHHHHHHhcc--ccCCCC---CEEEEEEecCCccceEEEEE
Confidence 233333 5889999999999999999997621 567799 99999999999999999999
Q ss_pred ecc
Q 047978 314 SIP 316 (320)
Q Consensus 314 ~~~ 316 (320)
+.+
T Consensus 377 v~~ 379 (460)
T 2wya_A 377 VSQ 379 (460)
T ss_dssp ECS
T ss_pred EeC
Confidence 875
No 40
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=100.00 E-value=2.4e-40 Score=302.75 Aligned_cols=279 Identities=19% Similarity=0.248 Sum_probs=224.7
Q ss_pred ceEEccccccCCCcccccccHHHHHhhhcCCchh---HHHHHHHHHhhhcccchHHHHHHHHHHHHHHcCCCCCCcCEEE
Q 047978 6 KFQETQRPQANPANCVYQTDYPDFYFRITSSNHM---TELKEKFKRMYILVPKVPKLGKEAVSKAIKEWGQPISKITHLI 82 (320)
Q Consensus 6 ~~~I~a~~~~lP~~~i~~~e~~~~~~~~~~~~~~---~gi~~~~r~~~~~~e~~~~la~~Aa~~aL~~ag~~~~dId~li 82 (320)
+++|.++++|+|+++++|+++.+.+ ..+.+|+ +||.+ ||++.+ ++..+|+.+|+++||+++|+++++||.||
T Consensus 2 ~~~I~~~g~~~P~~~~~~~~~~~~~--~~~~~~i~~~~Gi~~--r~~~~~-~~~~~l~~~a~~~al~~ag~~~~~id~v~ 76 (309)
T 2ebd_A 2 GTKIIGTGVYLPKNVLTNFDLEKIV--DTSDEWITTRTGIKE--RRIAKE-ETITYMATQAAKEALREANLSPEELDLII 76 (309)
T ss_dssp CEEEEEEEEECCSEEEEHHHHHTTS--SCCHHHHHHHHCCCE--EEECSS-CCHHHHHHHHHHHHHHHHTCCGGGCSEEE
T ss_pred ceEEEEEEEECCCceEcHHHHHHHc--CCCHHHHHHHhCcee--eeecCC-CCHHHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 4799999999999999999998765 3333442 45655 677644 88999999999999999999999999999
Q ss_pred EEeeCC-CCCCCHHHHHHHHcCCCcc-------hhhhhhh--------hhcCCCCeEEEEEeecccccccCCCCCCchhh
Q 047978 83 SCSVSG-VDMPGADYQLTKLLGLKPS-------VKRVMLT--------AESNAGARVLVVCSEITVGTFRAPSDENLSCL 146 (320)
Q Consensus 83 ~~s~t~-~~~p~~a~~l~~~LGl~~~-------~c~~~l~--------l~~~~~~~~LVv~~e~~s~~~~~~~~~~~~~~ 146 (320)
++++++ +..|+.+.+|+.+||+++. .|+++++ ++++..+++||+++|..++ +.+|.+ +
T Consensus 77 ~~~~~~~~~~~~~a~~v~~~lgl~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~vlv~g~e~~s~-~~~~~~-----~ 150 (309)
T 2ebd_A 77 LATLTPQKRFPSTACLVQAQLKAKGVYAFDISAACSGFIYALDIADSFIKSGKAKNVLVIGAEKLSE-AVDWED-----R 150 (309)
T ss_dssp EECSSCSSSSSCHHHHHHHHHTCTTCEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGG-TCCTTC-----T
T ss_pred EEcCCCCCCCCcHHHHHHHHhCCCCceEEecCccchHHHHHHHHHHHHHHCCCCCEEEEEEeccccc-ccCccc-----h
Confidence 999988 7789999999999999862 3776544 6789999999999999986 555544 2
Q ss_pred hhhhhhccCceEEEEeecCCC-CCCCCeeEEeccCc----eecCCCcccccccccccc-----eechhHHHHHHHHhhhc
Q 047978 147 VNRAIVGDGTAALIVGACPDI-NTERPLFHIVPTAQ----TILPDSEDAIKGHFRESP-----LIADNIDKFLAESFDQV 216 (320)
Q Consensus 147 ~~~~~~GDgAaA~ll~~~~~~-~~~~~~~~~~~~~~----~~~p~~~~~~~~~~~~~g-----~~~~~~~~~i~~~l~~~ 216 (320)
.+.++|||||+|+||++.+.. ++. ...+.+.+. ...|.. ..+.++| +..+.++++++++|+++
T Consensus 151 ~~~~~~gdGaaA~vL~~~~~~~~i~--~~~~~~~g~~~~~~~~p~~-----~~~~~~g~~~~~~~~~~~~~~i~~al~~a 223 (309)
T 2ebd_A 151 STCVLFGDGAGAVVVTRSEDKSDIL--ATRMYAEGSLEELLHADNC-----GYIRMKGRELFKVAVRSMEEVCREVLEKA 223 (309)
T ss_dssp TTTTTBCEEEEEEEEEECSSSCEEE--EEEEEECGGGGGGEEECTT-----CCEEECHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhccccccccEEEEEEecCCCCcee--EEEEEecCCccceeEeCCC-----CeEEEccHHHHHHHHHHHHHHHHHHHHHc
Confidence 357899999999999987652 110 011222221 112211 0123333 23457788999999999
Q ss_pred CCCCCCCCceEEEEcCCChhHHHHHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCCCCCCceE
Q 047978 217 SLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWG 296 (320)
Q Consensus 217 g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~v 296 (320)
|++++|| +++++|+.+.++++.+.+.||++++++.. ++.+|||+++|+++++|.+++++ |++++| |++
T Consensus 224 gl~~~di--d~~~~H~~~~~~~~~~~~~lg~~~~~~~~---~~~~~Gh~~~As~~~~L~~~~~~----g~~~~G---~~~ 291 (309)
T 2ebd_A 224 GVKPEEV--SLVIPHQANVRIINALAEKLNIPKEKVFV---NIQKYGNTSAASIPIALHEAIKE----GKVKRG---DLI 291 (309)
T ss_dssp TCCGGGC--SEEEECCSCHHHHHHHHHHTTCCGGGBCC---CHHHHCBCGGGHHHHHHHHHHHT----TCCCTT---CEE
T ss_pred CCCHHHC--CEEEEcCCCHHHHHHHHHHhCCCHHHhhh---hHhhhcchHHHHHHHHHHHHHHc----CCCCCC---CEE
Confidence 9999997 39999999999999999999999999876 48899999999999999999998 999999 999
Q ss_pred EEEeeccchhhhheeeee
Q 047978 297 VLLGFEAGLTVEAIVLRS 314 (320)
Q Consensus 297 ll~~~G~G~~~~a~~l~~ 314 (320)
++++||+|++++++++||
T Consensus 292 l~~~~G~G~~~~~~~l~~ 309 (309)
T 2ebd_A 292 LMTAMGGGLTWGAVLLRY 309 (309)
T ss_dssp EEEEEETTTEEEEEEEEC
T ss_pred EEEEEchhhhhEEEEEEC
Confidence 999999999999999997
No 41
>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A
Probab=99.92 E-value=2.6e-24 Score=195.62 Aligned_cols=236 Identities=13% Similarity=0.111 Sum_probs=157.1
Q ss_pred ccchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCc----chhhhhhh--------hhcCCC
Q 047978 53 VPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKP----SVKRVMLT--------AESNAG 120 (320)
Q Consensus 53 ~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~----~~c~~~l~--------l~~~~~ 120 (320)
+++.++|+.+|+++||+++|++++|||+||++|.+++.. ++..++++||++- ..|+++++ ++++..
T Consensus 52 e~a~sdLa~~Aa~~AL~~AGi~~~DID~II~gt~t~q~~--~A~~va~~LgipafdV~~ACsg~~~AL~~Aa~~I~sG~~ 129 (347)
T 3lma_A 52 EMAERKLMEDAVQSALSKQNLKKEDIDIFLAGDLLNQNV--TANYVARHLKIPFLCLFGACSTSMESIAISSALIDGGFA 129 (347)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCCGGGCSEEEEEESSSSST--THHHHHHHHCCCEEEBCCSTTHHHHHHHHHHHHHHTTSC
T ss_pred cHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCchh--HHHHHHHHhCCCEEEecChhHHHHHHHHHHHHHHhcCCC
Confidence 678899999999999999999999999999999998433 7899999998763 25888766 778999
Q ss_pred CeEEEEEeeccccc---ccCCCCCCchhhhhhhhhccCceEEEEeecCCCCCCCCeeEEeccCceecCCCcccccccccc
Q 047978 121 ARVLVVCSEITVGT---FRAPSDENLSCLVNRAIVGDGTAALIVGACPDINTERPLFHIVPTAQTILPDSEDAIKGHFRE 197 (320)
Q Consensus 121 ~~~LVv~~e~~s~~---~~~~~~~~~~~~~~~~~~GDgAaA~ll~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 197 (320)
++||||++|+.|+. ++.|.+...+...+..+++|||+|+||++.+.. +.+.-...|....-...++ ..+
T Consensus 130 ~~VLVVGaE~~S~aerq~r~p~e~g~q~p~ta~~t~dGAGA~VL~~~g~~----p~I~~~t~Gkvvd~g~~d~----~nm 201 (347)
T 3lma_A 130 KRALAATSSHNATAERQFRYPTEYGGQKPGTATSTVTGSGAVVLSQQPGG----IKITSATVGRVIDLGITDS----QDM 201 (347)
T ss_dssp SEEEEEEEECGGGTTCCC----------------CCCEEEEEEEESSCCS----EEEEEEECCCCBCCSCCCT----TCH
T ss_pred CEEEEEEeccccchhhhccCcchhcccCCchhcEEccceeEEEEEecCCC----CceeeeeeeeeeccCCCCC----CCc
Confidence 99999999999852 222322111123356778999999999976542 2222222111111000011 111
Q ss_pred cceechhHHHHHHHHhhhcCCCCCCCCceEEE---EcCCChhHHHHHHHHcCCCcchhhhhHHHHhccCCccc-------
Q 047978 198 SPLIADNIDKFLAESFDQVSLNDHDWNSLFWM---MHPIGPAVLDQIEGKLGLEKTKLRETRHVLSEYGNMAS------- 267 (320)
Q Consensus 198 ~g~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i---~h~~~~~~~~~~~~~lg~~~e~~~~~~~~~~~~Gn~~s------- 267 (320)
..-......+++++.|+++|++++|+ ++++ +||.|.+|++.+.+++|+|.++.+.+ =.+.-|+|...
T Consensus 202 g~amaPaA~~ti~~~l~d~g~~~~d~--D~ivtgdL~q~g~~il~~l~~~~g~~~~~~~~d-cg~~iy~~~~~~~~ggsg 278 (347)
T 3lma_A 202 GSAMAPAAADTIKQHLEDLGRTPDDY--DLILTGDLSGVGSPILKDLLKEEGINVGTKHND-CGLMIYTPDQQVFAGGSG 278 (347)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCGGGC--SEEEEESCHHHHHHHHHHHHHHTTCCCGGGEEE-GGGTSSCC---------C
T ss_pred cccchHHHHHHHHHHHHHhCCCHHHc--CEEecCChHHHHHHHHHHHHHHcCCChhHCccc-cceEEecCCCcccCCCCc
Confidence 10112333467789999999999998 4999 77999999999999999999887762 01445555543
Q ss_pred -chHHHHHHHHHHhchhcCCCCCCCCCceEEEEeeccchhh
Q 047978 268 -ATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTV 307 (320)
Q Consensus 268 -asi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~ 307 (320)
+...+.|...+-.. ++.|+- +|||++++|+.++-
T Consensus 279 ~~csa~v~~~~~~~~-----~~~g~~-~ril~~~tGalls~ 313 (347)
T 3lma_A 279 CACSAVVTFAHIFKE-----IEAGRL-NRVLVVATGALLSP 313 (347)
T ss_dssp CCCHHHHHHHTHHHH-----HHTTSC-SEEEEEEEEECCCH
T ss_pred cccHHHHHHHHHHHH-----HhcCcc-cEEEEEecccccCc
Confidence 66666666665542 333422 78999999998774
No 42
>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile}
Probab=99.74 E-value=3.4e-17 Score=154.33 Aligned_cols=242 Identities=17% Similarity=0.081 Sum_probs=163.9
Q ss_pred hhcccchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCC-CCCCCHHHHHHHHcCCCcc--------hhhhhhh------
Q 047978 50 YILVPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSG-VDMPGADYQLTKLLGLKPS--------VKRVMLT------ 114 (320)
Q Consensus 50 ~~~~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~-~~~p~~a~~l~~~LGl~~~--------~c~~~l~------ 114 (320)
...+++..+|+.+|+++||+++|++++|||.|+++++++ +..|..+.+++..||+++. .|+++++
T Consensus 23 ~~~~~~~~~L~~~a~~~Al~~agi~~~~Id~v~~g~~~~~~~~~~~a~~~~~~lGl~~~~p~~~v~~~Css~~~al~~A~ 102 (395)
T 4e1l_A 23 VFKNTSAVQLGTIAVKEAISRVGLNLSEIDEVIIGNVLQTGLGQNVARQIAINAGIPNSVPSYTVNKLCGSGLKSVQLAA 102 (395)
T ss_dssp TTTTSCHHHHHHHHHHHHHHHTTCCGGGCCEEEEECCCCSSTTCCHHHHHHHHTTCCTTSCEEEECCGGGHHHHHHHHHH
T ss_pred CcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcchHHHHHHHHcCCCCCceEEEccccchHHHHHHHHHH
Confidence 345789999999999999999999999999999999988 6788999999999999632 3777654
Q ss_pred --hhcCCCCeEEEEEeeccccc-c--------------------------------------------------------
Q 047978 115 --AESNAGARVLVVCSEITVGT-F-------------------------------------------------------- 135 (320)
Q Consensus 115 --l~~~~~~~~LVv~~e~~s~~-~-------------------------------------------------------- 135 (320)
+++|..+++||+++|..+.. +
T Consensus 103 ~~I~~G~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~tre~~~~~a 182 (395)
T 4e1l_A 103 QSITSGENDVVIAGGTENMSQAPYIVPTARFGSKMGNITMVDSMLTDGLIDAFNQYHMGITAENIATKFEFTREMQDKLA 182 (395)
T ss_dssp HHHHTTSCSEEEEEEEEETTTHHHHSBHHHHEEESCCC------CCTTEEEETTHHHHHHHHHHHHHHHTCCHHHHHHHH
T ss_pred HHHhCCCCCEEEEEEEecccCCcccccccccccccCccccchhhcccccccccccchHHHHHHHHHHHhCCCHHHHHHHH
Confidence 78899999999999988640 0
Q ss_pred ----------------------------------cCCCCCCc-----h---------------hhhhhhhhccCceEEEE
Q 047978 136 ----------------------------------RAPSDENL-----S---------------CLVNRAIVGDGTAALIV 161 (320)
Q Consensus 136 ----------------------------------~~~~~~~~-----~---------------~~~~~~~~GDgAaA~ll 161 (320)
.++++.-+ + .....+.+||||+|+||
T Consensus 183 ~~s~~~a~~a~~~g~~~~ei~pv~~~~~~g~~~~~~~d~~~r~~~t~e~l~~~~~v~~~~g~~t~~~~~~~~dGaaavvL 262 (395)
T 4e1l_A 183 LESQNKAENAIKNNRFKEEIVPVDVLIRRGKIETIDKDEYPKLGMTFEGLSKLKPAFKKDGTVTAGNASGINDGAAMLIL 262 (395)
T ss_dssp HHHHHHHHHHHHTTTTTTTBCCEEEEEETTEEEEECSCSCCCTTCCHHHHHHCCBSSSTTCSCBTTSBCCCEEEEEEEEE
T ss_pred HHHHHHHHHHHHcCCcccceeeeEeccCCCcceEECCccccCCCCCHHHHhhCCCccCCCCCeeCCcCCCccceEEEEEE
Confidence 01100000 0 01124556899999999
Q ss_pred eecCCC-C-CCCCeeEEeccCceecCCCcccccccccccceechhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHH
Q 047978 162 GACPDI-N-TERPLFHIVPTAQTILPDSEDAIKGHFRESPLIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLD 239 (320)
Q Consensus 162 ~~~~~~-~-~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~ 239 (320)
.+.+.. . -..+...+...+.... .. ... ......+++++++++|++++|| +++.+|+.+.....
T Consensus 263 ~s~~~A~~~g~~~~a~i~g~~~~~~--~p-------~~~---~~~~~~ai~~al~~agl~~~dI--d~ve~~d~fa~~~~ 328 (395)
T 4e1l_A 263 MSQQKADELGIRPLAKIKSYASAGV--EP-------EVM---GTGPIPATRKALKKAGLSINDI--DLIEANEAFAAQAL 328 (395)
T ss_dssp EEHHHHHHHTCCCSEEEEEEEEEEC--CG-------GGT---TCTHHHHHHHHHHHTTCCGGGC--SEEEECCSBHHHHH
T ss_pred ecHHHHHHCCCCeEEEEEEEEEccC--CC-------Ccc---hHHHHHHHHHHHHHcCCCHHHc--CEEEecChhHHHHH
Confidence 876532 0 0112224433222110 00 001 1234578999999999999997 38999999998889
Q ss_pred HHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCCCCCCceEEEEeeccchhhhheeee
Q 047978 240 QIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEAIVLR 313 (320)
Q Consensus 240 ~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~~l~ 313 (320)
.+.+.||++++++..+ .....+||+.+|+-...+..++..... +.+ ++.|....+.|....+++++
T Consensus 329 ~~~~~lg~~~~~v~~~-gg~~~~Gh~~gasG~~~~~~~~~~L~~----~~~---~~gl~~~c~ggG~g~a~~~e 394 (395)
T 4e1l_A 329 AVKNELQIDSSKLNVN-GGAIALGHPIGASGARILVTLIYEMQK----RKV---ETGLATLCIGGGQGISMVVS 394 (395)
T ss_dssp HHHHHHTCCGGGBSTT-CCHHHHCCCTTTHHHHHHHHHHHHHHH----HTC---SEEEEEEESSTTEEEEEEEE
T ss_pred HHHHHhCCCCCCCCcC-CchhhcCCcHHHHHHHHHHHHHHHHHh----cCC---CEEEEEEccCCCceEEEEEe
Confidence 9999999998887553 124558999888866666666554221 122 45554444444444455554
No 43
>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis}
Probab=99.73 E-value=3.9e-17 Score=153.83 Aligned_cols=243 Identities=13% Similarity=0.051 Sum_probs=164.6
Q ss_pred hhhcccchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCC-CCCCCHHHHHHHHcCCCcc--------hhhhhhh-----
Q 047978 49 MYILVPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSG-VDMPGADYQLTKLLGLKPS--------VKRVMLT----- 114 (320)
Q Consensus 49 ~~~~~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~-~~~p~~a~~l~~~LGl~~~--------~c~~~l~----- 114 (320)
....+++..+|+.+|+++||+++|++++|||.+++++.++ +..|..+.+++..||++.. .|+++++
T Consensus 22 ~~~~~~~~~~L~~~A~~~Al~~agl~~~~Id~v~~g~~~~~~~~~~~a~~i~~~lGl~~~~p~~~v~~aCss~~~al~~A 101 (394)
T 3ss6_A 22 GALKNVTPVELAVPVLQEAVKRGGVEPHEVDEVILGHCIQRTDEANTARTAALAAGFPDTVTGYTIQRQCSSGMQAIMSA 101 (394)
T ss_dssp STTTTCCHHHHHHHHHHHHHHHTTCCGGGCCEEEEECSSCCGGGCSHHHHHHHHTTCCTTCEEEEEECGGGHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHcCCCHhHCCEEEEEEccCCCccchHHHHHHHHcCCCCCceEEEecCcchHHHHHHHHH
Confidence 3445789999999999999999999999999999999988 6678899999999999631 3877654
Q ss_pred ---hhcCCCCeEEEEEeeccccc-c-------------------------------------------------------
Q 047978 115 ---AESNAGARVLVVCSEITVGT-F------------------------------------------------------- 135 (320)
Q Consensus 115 ---l~~~~~~~~LVv~~e~~s~~-~------------------------------------------------------- 135 (320)
+++|..+++||+++|..+.. +
T Consensus 102 ~~~I~~G~~~~vlv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~tre~~~~~a 181 (394)
T 3ss6_A 102 AMQIQLGVSEVVVAGGVEAMSSSPYALKQHRWGQRLQHGEIRDTVWEVLEDPIHHIMMGETAENLVEQYEITREEQDEVA 181 (394)
T ss_dssp HHHHHHTSCSEEEEEEEEECTTCCEEESSTTTCCCSSCCCCEEHHHHHTBCTTTCCBHHHHHHHHHHHHTCCHHHHHHHH
T ss_pred HHHHhCCCCCEEEEEEEhhccCCcccccccccccccCCcccccccccccccccccchHHHHHHHHHHHhCCCHHHHHHHH
Confidence 78899999999999988741 1
Q ss_pred ---------------------------------cCCCCCCc-----h---------------hhhhhhhhccCceEEEEe
Q 047978 136 ---------------------------------RAPSDENL-----S---------------CLVNRAIVGDGTAALIVG 162 (320)
Q Consensus 136 ---------------------------------~~~~~~~~-----~---------------~~~~~~~~GDgAaA~ll~ 162 (320)
.+|+..-+ + .....+.+||||+|+||.
T Consensus 182 ~~s~~~A~~a~~ag~f~~ei~p~~~~~~~~~~~~~~d~~~R~~~t~e~~~~~~pvf~~~g~~t~~~~~~~~dGaaavvL~ 261 (394)
T 3ss6_A 182 LRSHTLALKAIESGYFDDQIVPITIKERRKEVVFSKDEHPRADITAEKLAGLKPAFRKDGSVTAGNASGLNDGSAVLVLM 261 (394)
T ss_dssp HHHHHHHHHHHHHTTTTTTBCCEEEECSSCEEEECSCCCCCTTCCHHHHHTCCBSSSTTCCCBSTTBCCCEEEEEEEEEE
T ss_pred HHHHHHHHHhHhcCCccceeEeEEeccCCCceeecccccccCCCCHHHHhhCCCccCCCCceecCccCCcccceeEEEec
Confidence 00100000 0 012345578999999998
Q ss_pred ecCCC-C-CCCCeeEEeccCcee-cCCCcccccccccccceechhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHH
Q 047978 163 ACPDI-N-TERPLFHIVPTAQTI-LPDSEDAIKGHFRESPLIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLD 239 (320)
Q Consensus 163 ~~~~~-~-~~~~~~~~~~~~~~~-~p~~~~~~~~~~~~~g~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~ 239 (320)
+.+.. . -..+...+...+... .|. .. ......+++++++++|++++|| +++-+|+.+.....
T Consensus 262 ~~~~A~~~g~~~~a~I~g~~~~~~~p~----------~~---~~~~~~a~~~al~~agl~~~dI--d~ve~~d~fa~~~~ 326 (394)
T 3ss6_A 262 SEEKAKEKGLQPLARIVGYSVAGVDPK----------IM---GIGPAPAIRKGLEKVDWSLEDA--DLLEINEAFAAQYL 326 (394)
T ss_dssp EHHHHHHHTCCCSEEEEEEEEEECCGG----------GG---GGTHHHHHHHHHHHHTCCGGGC--SEEEECCSBHHHHH
T ss_pred cHHHHHHCCCCceEEEEEEEEecCCCc----------cc---hHHHHHHHHHHHHHcCCCHHHc--CEEEeCCchHHHHH
Confidence 76531 0 011222343322211 111 00 1234678899999999999997 38999999988888
Q ss_pred HHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCCCCCCceEEEEeeccchhhhheeeee
Q 047978 240 QIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEAIVLRS 314 (320)
Q Consensus 240 ~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~~l~~ 314 (320)
.+.+.||++++++..+ .....+||+.+|+-...+..++..... +.+ ++.|....++|....+++++.
T Consensus 327 ~~~~~lg~~~~~v~~~-gg~~~~GH~~gasG~~~~~~~~~~L~~----~~~---~~gl~~~c~ggG~g~a~~~e~ 393 (394)
T 3ss6_A 327 AVEKELDLDREKVNVN-GSGVGLGHPIGCTGARITVSLIHELKR----RGL---EKGIASLCVGGGIGVALFIEA 393 (394)
T ss_dssp HHHHHHTCCGGGBSTT-CCHHHHCCCHHHHHHHHHHHHHHHHHH----HTC---CEEEEEEEETTTEEEEEEEEE
T ss_pred HHHHHhCCCCCCCCCC-cchHhhCCcHHHHHHHHHHHHHHHHHh----cCC---CEEEEEEccCcCceeEEEEEc
Confidence 9999999998887543 124568999999866666666554221 123 455544333343444566653
No 44
>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile}
Probab=99.71 E-value=1.5e-16 Score=149.96 Aligned_cols=243 Identities=14% Similarity=0.044 Sum_probs=164.8
Q ss_pred HhhhcccchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCC-CCCCCHHHHHHHHcCCCcc--------hhhhhhh----
Q 047978 48 RMYILVPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSG-VDMPGADYQLTKLLGLKPS--------VKRVMLT---- 114 (320)
Q Consensus 48 ~~~~~~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~-~~~p~~a~~l~~~LGl~~~--------~c~~~l~---- 114 (320)
+...++++..+|+.+|+++||+++|++++|||.||++++++ +..|..+.+++..||+++. .|+++++
T Consensus 23 ~~~~~~~~~~~L~~~A~~~AL~~agl~~~dId~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~p~~~v~~aCss~~~al~~ 102 (396)
T 4dd5_A 23 GGAFKSVSAVELGVTAAKEAIKRANITPDMIDESLLGGVLTAGLGQNIARQIALGAGIPVEKPAMTINIVCGSGLRSVSM 102 (396)
T ss_dssp TSTTTTSCHHHHHHHHHHHHHHHTTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSCEEEECCGGGHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCCCCCchHHHHHHHHcCCCCCceEEEeccccHHHHHHHHH
Confidence 34446789999999999999999999999999999999998 7789999999999999632 3877654
Q ss_pred ----hhcCCCCeEEEEEeeccccc-cc-----------------------------------------------------
Q 047978 115 ----AESNAGARVLVVCSEITVGT-FR----------------------------------------------------- 136 (320)
Q Consensus 115 ----l~~~~~~~~LVv~~e~~s~~-~~----------------------------------------------------- 136 (320)
++++..++|||+++|..+.. +.
T Consensus 103 A~~~I~~G~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~tre~~~~ 182 (396)
T 4dd5_A 103 ASQLIALGDADIMLVGGAENMSMSPYLVPSARYGARMGDAAFVDSMIKDGLSDIFNNYHMGITAENIAEQWNITREEQDE 182 (396)
T ss_dssp HHHHHHHTSCSEEEEEEEEESTTCCEECTTTTTCCCSSCCCCEEHHHHHTSEETTTTEEHHHHHHHHHHHHTCCHHHHHH
T ss_pred HHHHHhcCCCCEEEEEEEecccCCcccccccccccccCcccccchhhhcccccccccchHHHHHHHHHHHhCCCHHHHHH
Confidence 77899999999999988741 10
Q ss_pred ------------------------------------CCCCC-----Cch---------------hhhhhhhhccCceEEE
Q 047978 137 ------------------------------------APSDE-----NLS---------------CLVNRAIVGDGTAALI 160 (320)
Q Consensus 137 ------------------------------------~~~~~-----~~~---------------~~~~~~~~GDgAaA~l 160 (320)
++++. +.+ .....+.+||||+|+|
T Consensus 183 ~a~~s~~~a~~a~~~g~f~~ei~pv~~~~~~~~~~~~~d~~~r~~~t~e~l~~~~~v~~p~g~~t~~~~~~~~dGaaavv 262 (396)
T 4dd5_A 183 LALASQNKAEKAQAEGKFDEEIVPVVIKGRKGDTVVDKDEYIKPGTTMEKLAKLRPAFKKDGTVTAGNASGINDGAAMLV 262 (396)
T ss_dssp HHHHHHHHHHHHHHTTTTTTTBCCEEEC----CEEECSCSCCCTTCCHHHHHHCCBSSSTTCSCBTTTBCCCEEEEEEEE
T ss_pred HHHHHHHHHHHhHHcCCcccceeeeeeccCCCceeecCcccccCCCCHHHHhhCCCccCCCCCeecCCCCCcCcceeEEE
Confidence 00000 000 0122445689999999
Q ss_pred EeecCCC-C-CCCCeeEEeccCcee-cCCCcccccccccccceechhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhH
Q 047978 161 VGACPDI-N-TERPLFHIVPTAQTI-LPDSEDAIKGHFRESPLIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAV 237 (320)
Q Consensus 161 l~~~~~~-~-~~~~~~~~~~~~~~~-~p~~~~~~~~~~~~~g~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~ 237 (320)
|.+.+.. . -..+...+...+... .|. . .......+++.+++++|++++||+ ++-+|-.....
T Consensus 263 L~s~~~A~~~g~~~~a~I~g~~~~~~~p~----------~---~~~~~~~a~~~al~~Agl~~~dId--~ve~~d~f~~~ 327 (396)
T 4dd5_A 263 VMAKEKAEELGIEPLATIVSYGTAGVDPK----------I---MGYGPVPATKKALEAANMTIEDID--LVEANEAFAAQ 327 (396)
T ss_dssp EEEHHHHHHHTCCCSEEEEEEEEEECCGG----------G---GGGTHHHHHHHHHHHHTCCGGGCS--EEEECCSBHHH
T ss_pred EeeHHHHHHCCCCceEEEEEEEEecCCCC----------c---ccHHHHHHHHHHHHHcCCCHHHcC--EEEecChHHHH
Confidence 9886532 0 011223444332211 111 0 113456788999999999999973 88889888777
Q ss_pred HHHHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCCCCCCceEEEEeeccchhhhheeee
Q 047978 238 LDQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEAIVLR 313 (320)
Q Consensus 238 ~~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~~l~ 313 (320)
...+.+.||++++++..+ .....+||+.+|+=...+..++..... +.+ .+.|....+.|....+++++
T Consensus 328 ~~~~~~~lg~~~~~~n~~-gg~~~~GH~~gasG~~~~~~~~~~L~~----~~~---~~gl~~~c~ggG~g~a~~~e 395 (396)
T 4dd5_A 328 SVAVIRDLNIDMNKVNVN-GGAIAIGHPIGCSGARILTTLLYEMKR----RDA---KTGLATLCIGGGMGTTLIVK 395 (396)
T ss_dssp HHHHHHHHTCCTTSBSTT-CCHHHHCCCHHHHHHHHHHHHHHHHHH----HTC---SEEEEEEEETTTEEEEEEEE
T ss_pred HHHHHHHhCCCCCccCCC-CchhhccCcHHHHHHHHHHHHHHHHHh----cCC---CeEEEEEcccCCceeEEEEe
Confidence 777889999887766432 134558999888877667666655221 123 45555555555455556665
No 45
>2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus}
Probab=99.67 E-value=1.1e-15 Score=145.71 Aligned_cols=297 Identities=13% Similarity=0.065 Sum_probs=182.4
Q ss_pred CCcccceEEccccccCCCcccccccHHHHHhhhcC-----Cch------------hHHHHHHHHHhh----hcccchHHH
Q 047978 1 MALLGKFQETQRPQANPANCVYQTDYPDFYFRITS-----SNH------------MTELKEKFKRMY----ILVPKVPKL 59 (320)
Q Consensus 1 ~~~~~~~~I~a~~~~lP~~~i~~~e~~~~~~~~~~-----~~~------------~~gi~~~~r~~~----~~~e~~~~l 59 (320)
|..+++|.|+++|...|.. .+.+++-+.+..+.+ ..| +..+... .++. ..-....+|
T Consensus 24 m~~~~~vaI~G~g~~~P~g-~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~i~~fd~~-~~~~~~~~~~~d~~~~l 101 (437)
T 2gqd_A 24 MSQNKRVVITGMGALSPIG-NDVKTTWENALKGVNGIDKITRIDTEPYSVHLAGELKNFNIE-DHIDKKEARRMDRFTQY 101 (437)
T ss_dssp ---CCCEEEEEEEEEBTTB-SSHHHHHHHHHTTCCCEEECCSSCCTTSSCCEEECCSSCCGG-GTSCSTTTTTSCHHHHH
T ss_pred ccCCCCEEEEEeeEECCCC-CCHHHHHHHHHcCCCceeeCCccccccCccceeEEeCCCChh-cCCCHHHHHhcCHHHHH
Confidence 5556789999999999988 345555554421111 001 0000000 0111 111234689
Q ss_pred HHHHHHHHHHHcCCCCCCcC----EEEEEeeCCC------------------C---------CCCHHHHHHHHcCCCcc-
Q 047978 60 GKEAVSKAIKEWGQPISKIT----HLISCSVSGV------------------D---------MPGADYQLTKLLGLKPS- 107 (320)
Q Consensus 60 a~~Aa~~aL~~ag~~~~dId----~li~~s~t~~------------------~---------~p~~a~~l~~~LGl~~~- 107 (320)
+.+|+++||+++|+++++|| .|+++++++. . .+..+.+|+..||++..
T Consensus 102 ~l~aa~~AL~dAGl~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~gp~ 181 (437)
T 2gqd_A 102 AIVAAREAVKDAQLDINENTADRIGVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPN 181 (437)
T ss_dssp HHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCSSE
T ss_pred HHHHHHHHHHHcCCCccccCCcceEEEEeecCCcHHHHHHHHHHHHhcCcccCChHHhhhcchhHHHHHHHHHhCCCCce
Confidence 99999999999999999999 9998887541 1 12468999999999753
Q ss_pred -----hhhhhhh--------hhcCCCCeEEEEEeecc-ccc-------------------ccCCCCCCchhhhhhhhhcc
Q 047978 108 -----VKRVMLT--------AESNAGARVLVVCSEIT-VGT-------------------FRAPSDENLSCLVNRAIVGD 154 (320)
Q Consensus 108 -----~c~~~l~--------l~~~~~~~~LVv~~e~~-s~~-------------------~~~~~~~~~~~~~~~~~~GD 154 (320)
.|++.++ |++|..+.+||+++|.. ++. ...|-| ....++++||
T Consensus 182 ~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~p~~~~~pfd----~~~~G~v~ge 257 (437)
T 2gqd_A 182 GATVTACATGTNSIGEAFKIVQRGDADAMITGGTEAPITHMAIAGFSASRALSTNDDIETACRPFQ----EGRDGFVMGE 257 (437)
T ss_dssp ECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCCCTTTSSCTTC----TTCCSBCBBC
T ss_pred EEecCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhccCccCCCCCccccCCCC----CCCCCceeec
Confidence 3776544 78899999999999973 220 011222 1235789999
Q ss_pred CceEEEEeecCCC---CCCCCeeEEeccCceecCCCcccccccccccceechhHHHHHHHHhhhcCCCCCCCCceEEEEc
Q 047978 155 GTAALIVGACPDI---NTERPLFHIVPTAQTILPDSEDAIKGHFRESPLIADNIDKFLAESFDQVSLNDHDWNSLFWMMH 231 (320)
Q Consensus 155 gAaA~ll~~~~~~---~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h 231 (320)
||+|+||++.+.. + .....++...+....... +. ....+ .....++++++|+++|++++|| +++.+|
T Consensus 258 GaaavvL~~~~~A~~~g-~~i~a~I~g~~~~~dg~~---~~-~p~~~---~~~~~~ai~~Al~~Agl~p~dI--d~ve~H 327 (437)
T 2gqd_A 258 GAGILVIESLESAQARG-ANIYAEIVGYGTTGDAYH---IT-APAPE---GEGGSRAMQAAMDDAGIEPKDV--QYLNAH 327 (437)
T ss_dssp EEEEEEEEEHHHHHHHT-CCCCEEEEEEEEEECCSC---SS-SCCGG---GHHHHHHHHHHHHHHTCCGGGC--CEEECC
T ss_pred eEEEEEECcHHHHHhCC-CceEEEEEEEEecCCCCC---CC-CCCCC---HHHHHHHHHHHHHHcCCCHhhC--CEEEEE
Confidence 9999999875431 1 111233333221111100 00 00111 2456788999999999999997 399999
Q ss_pred CCChhHHH-----HHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCC-------C---------
Q 047978 232 PIGPAVLD-----QIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATT-------G--------- 290 (320)
Q Consensus 232 ~~~~~~~~-----~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~-------G--------- 290 (320)
+.+..+.| .+.+.++.+.+++..+ .+-..+||+.+|+=.+.|..++..... +.+.| .
T Consensus 328 gtgT~~~D~~E~~al~~~fg~~~~~~~v~-s~k~~~GH~~gAaG~~~li~~~l~l~~-~~ipp~~~~~~~~p~~~~~~v~ 405 (437)
T 2gqd_A 328 GTSTPVGDLNEVKAIKNTFGEAAKHLKVS-STKSMTGHLLGATGGIEAIFSALSIKD-SKVAPTIHAVTPDPECDLDIVP 405 (437)
T ss_dssp CCSCHHHHHHHHHHHHHHHGGGGTSCEEE-CTHHHHCBCGGGHHHHHHHHHHHHHHH-TEECCBTTCCSCCSSCCSBCCB
T ss_pred CCCCcCcCHHHHHHHHHHHhccCCCceee-cchhhhcCChhhhhHHHHHHHHHHHhc-CCCCCCCCCCCCCCCCCcccCC
Confidence 99987644 3455666544444432 124558999999877777665543211 33210 0
Q ss_pred -----CCCceEEEEeeccchhhhheeeeec
Q 047978 291 -----EELEWGVLLGFEAGLTVEAIVLRSI 315 (320)
Q Consensus 291 -----~~~d~vll~~~G~G~~~~a~~l~~~ 315 (320)
.+.++++.-+||.|.+-.+++|+..
T Consensus 406 ~~~~~~~~~~a~~~sfGfGG~na~~vl~~~ 435 (437)
T 2gqd_A 406 NEAQDLDITYAMSNSLGFGGHNAVLVFKKF 435 (437)
T ss_dssp SSCEECCCSEEEEEEECGGGEEEEEEEECC
T ss_pred CccccCCCCEEEEccCcCCCeeEEEEEEec
Confidence 0116788889999999888888753
No 46
>3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium}
Probab=99.66 E-value=9.6e-16 Score=144.76 Aligned_cols=241 Identities=16% Similarity=0.039 Sum_probs=154.6
Q ss_pred cccchHHHHHHHHHHHHHH-cCCCCCCcCEEEEEeeCC-C-CCCCHHHHHHHHcCCCcc--------hhhhhhh------
Q 047978 52 LVPKVPKLGKEAVSKAIKE-WGQPISKITHLISCSVSG-V-DMPGADYQLTKLLGLKPS--------VKRVMLT------ 114 (320)
Q Consensus 52 ~~e~~~~la~~Aa~~aL~~-ag~~~~dId~li~~s~t~-~-~~p~~a~~l~~~LGl~~~--------~c~~~l~------ 114 (320)
.+++..+|+.+|++++|++ +|++|+|||.+|+++.++ . ..|..+.+++..||++.. .|+++++
T Consensus 28 ~~~~~~~L~~~A~~~AL~~~AGl~~~dId~vi~g~~~~~~~~~~~~a~~va~~lGlp~~~pa~~v~~~Css~~~Al~~A~ 107 (407)
T 3svk_A 28 TEVKPLNLVVGLVDELRRRYPDLDETLISDMILGVVSPVGDQGGDIARTAVLAAGLPETTGGVQLNRFCASGLEAVNTAA 107 (407)
T ss_dssp TTSCHHHHHHHHHHHHHHHSTTCCGGGEEEEEEECC--------CHHHHHHHHTTCCTTCEEEEEC---CBSCCHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhhhcCcCHHHCCEEEEEecCccccccCcHHHHHHHHcCCCCCCceEEecCcChhHHHHHHHHH
Confidence 4678899999999999999 999999999999999888 4 368899999999999432 3776654
Q ss_pred --hhcCCCCeEEEEEeeccccc-c--------------------------------------------------------
Q 047978 115 --AESNAGARVLVVCSEITVGT-F-------------------------------------------------------- 135 (320)
Q Consensus 115 --l~~~~~~~~LVv~~e~~s~~-~-------------------------------------------------------- 135 (320)
+++|..+.+||+++|..+.. +
T Consensus 108 ~~I~sG~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~g~~Ae~~a~~~~i~re~~d~~a~~s~~~A~~A~~ 187 (407)
T 3svk_A 108 QKVRSGWDDLVLAGGVESMSRVPMGSDGGAWATDPETNYRIGFVPQGIGADLIATLEGFSREDVDAYALRSQQKAAAAWS 187 (407)
T ss_dssp HHHHHTSCCEEEEEEEECC-----------CCCCTTTCCCCCCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCCCEEEEEEEcccccCcccccccccccCchhhccccccCHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHH
Confidence 78899999999999987740 0
Q ss_pred -------------------cCCCCCCc-----h------------------------------------hhhhhhhhccC
Q 047978 136 -------------------RAPSDENL-----S------------------------------------CLVNRAIVGDG 155 (320)
Q Consensus 136 -------------------~~~~~~~~-----~------------------------------------~~~~~~~~GDg 155 (320)
.+|+..-+ + .....+.++||
T Consensus 188 ~g~~~~ei~pv~~~~g~~~~~pd~~~r~~~t~e~l~~~~~vf~~~g~v~~~~~~~~~~~~~~~~i~~~~t~~~~s~~~DG 267 (407)
T 3svk_A 188 GGYFAKSVVPVRDQNGLVILDHDEHMRPDTTMEGLAKLKTAFDGVGEMGGFDDVALQKYHWVEKINHVHTGGNSSGIVDG 267 (407)
T ss_dssp TTTTTTTBCCEECTTSCEEECSCTTCCTTCCHHHHHTSCBSCC-------------CTTTTCSSCCCCCBTTTBCCBEEE
T ss_pred cCCcccceeeeecCCCceeeCCccccCCCCCHHHHhhCCCeecCCCccccccccccccccccccccccccccccCcccCc
Confidence 11111000 0 01234458899
Q ss_pred ceEEEEeecCCC--CCCCCeeEEeccCceecCCCcccccccccccceechhHHHHHHHHhhhcCCCCCCCCceEEEEcCC
Q 047978 156 TAALIVGACPDI--NTERPLFHIVPTAQTILPDSEDAIKGHFRESPLIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPI 233 (320)
Q Consensus 156 AaA~ll~~~~~~--~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~ 233 (320)
|+|+||.+.+.. .-..+..++...+.... .. .. .......+++.+|+++|++++|| +++-+|+.
T Consensus 268 AaavvL~s~~~A~~~g~~~~a~i~g~~~~~~--~p-----~~-----~~~~~~~a~~~al~~Agl~~~dI--d~~e~hda 333 (407)
T 3svk_A 268 AALVLVGSEKAGKSQGLTPRARIVATATSGS--DP-----VI-----MLTGPTPATRKVLDRAGLTIDDI--DLFELNEA 333 (407)
T ss_dssp EEEEEEECHHHHHHTTCCCCEEEEEEEEC------------------CCCTHHHHHHHHHHHHTCCGGGC--SEEEECCS
T ss_pred eeEEEEeeHHHHHHcCCCCcEEEEEEEEecc--CC-----cc-----ccHHHHHHHHHHHHHcCCCHHHC--CEEEEeCh
Confidence 999999876531 00112234433221110 00 00 01223477899999999999997 39999999
Q ss_pred ChhHHHHHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCCCCCCceEEEEeeccchhhhheeee
Q 047978 234 GPAVLDQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEAIVLR 313 (320)
Q Consensus 234 ~~~~~~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~~l~ 313 (320)
+......+.+.||++++++-.+ -..--+||...|+=...+..++.+... +.+ ++.|....+.|....+++++
T Consensus 334 f~~~~l~~~~~lg~~~~~vn~~-Gg~~~~GHp~gasG~~~~~~~~~~L~~----~~~---~~gl~~~c~ggG~g~a~~~e 405 (407)
T 3svk_A 334 FASVVLKFQKDLNIPDEKLNVN-GGAIAMGHPLGATGAMITGTMVDELER----RNA---RRALITLCIGGGMGVATIIE 405 (407)
T ss_dssp BHHHHHHHHHHHTCCGGGBSTT-CCHHHHCBCGGGHHHHHHHHHHHHHHH----HTC---CEEEEEEECSSSCEEEEEEE
T ss_pred hHHHHHHHHHHhCCCCCCCCCC-CcHhheeCcHHHHHHHHHHHHHHHHHh----cCC---CEEEEEeeccCcceEEEEEE
Confidence 9888778889999998877542 012337998888766566555554221 123 56666555555555667776
Q ss_pred e
Q 047978 314 S 314 (320)
Q Consensus 314 ~ 314 (320)
.
T Consensus 406 ~ 406 (407)
T 3svk_A 406 R 406 (407)
T ss_dssp E
T ss_pred c
Confidence 4
No 47
>2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens}
Probab=99.65 E-value=5.2e-16 Score=147.13 Aligned_cols=275 Identities=12% Similarity=-0.027 Sum_probs=157.8
Q ss_pred CCCcccccccHHHHHhhh-cCCchh-----HHHHHHHHHhhhcccchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCC-
Q 047978 16 NPANCVYQTDYPDFYFRI-TSSNHM-----TELKEKFKRMYILVPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSG- 88 (320)
Q Consensus 16 lP~~~i~~~e~~~~~~~~-~~~~~~-----~gi~~~~r~~~~~~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~- 88 (320)
=|+++++|+|+.+..... .++.++ +.++++ ++...++++..+|+.+|+++||+++|+++++||.|+++++++
T Consensus 10 ~P~~~~~n~~~~~~~~~~~~~~v~Ivg~~rt~~g~~-~~~~~~~~~~~~L~~~Aa~~AL~dAgl~~~~id~v~~g~~~~~ 88 (418)
T 2iik_A 10 GVDLGTENLYFQSMAPQASAADVVVVHGRRTAICRA-GRGGFKDTTPDELLSAVMTAVLKDVNLRPEQLGDICVGNVLQP 88 (418)
T ss_dssp -----------------CCTTCEEEEEEEECCCEET-TTSTTTTCCHHHHHHHHHHHHHHHHTCCGGGCCCEEEECSSSB
T ss_pred CCCccccHHHHHHHhhhccCCCeEEEeeeecCceec-CCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCc
Confidence 499999999999876210 133343 345431 123446889999999999999999999999999999998887
Q ss_pred CCCCCHHHHHHHHcCCC-cc-------hhhhhhh--------hhcCCCCeEEEEEeeccccc-c----------------
Q 047978 89 VDMPGADYQLTKLLGLK-PS-------VKRVMLT--------AESNAGARVLVVCSEITVGT-F---------------- 135 (320)
Q Consensus 89 ~~~p~~a~~l~~~LGl~-~~-------~c~~~l~--------l~~~~~~~~LVv~~e~~s~~-~---------------- 135 (320)
+..|..+..++..||++ +. .|+++++ +++|..+.+||+++|..+.. +
T Consensus 89 ~~~~~~a~~~a~~lGl~~~~p~~~v~~aCss~~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~ 168 (418)
T 2iik_A 89 GAGAIMARIAQFLSDIPETVPLSTVNRQCSSGLQAVASIAGGIRNGSYDIGMACGVESMSLADRGNPGNITSRLMEKEKA 168 (418)
T ss_dssp GGGHHHHHHHHHHTTCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTCC-----CCCTTGGGCHHH
T ss_pred cccccHHHHHHHHcCCCCCceEEEeCCCCHHHHHHHHHHHHHHHCCCCCEEEEeccccCccCCccCCcccchhhhccccc
Confidence 55567788888999994 21 3877654 78899999999999987641 0
Q ss_pred -------------------------------------cCCC-----------------------------CCC-c-----
Q 047978 136 -------------------------------------RAPS-----------------------------DEN-L----- 143 (320)
Q Consensus 136 -------------------------------------~~~~-----------------------------~~~-~----- 143 (320)
.+|. |+. +
T Consensus 169 ~~~~~~~g~~a~~~a~~~gitre~~~~~a~~s~~~A~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~~~~~d~~~rp~~t~ 248 (418)
T 2iik_A 169 RDCLIPMGITSENVAERFGISREKQDTFALASQQKAARAQSKGCFQAEIVPVTTTVHDDKGTKRSITVTQDEGIRPSTTM 248 (418)
T ss_dssp HGGGSCHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEEEECTTSCEEEEEECSCTTCCTTCCH
T ss_pred ccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhChhcCccccceeeeeeccccccCcccceeeecccCcCCCCCH
Confidence 0000 000 0
Q ss_pred ----------h-h----hhhhhhhccCceEEEEeecCCC---CCCCCeeEEeccCceecCCCcccccccccccceechhH
Q 047978 144 ----------S-C----LVNRAIVGDGTAALIVGACPDI---NTERPLFHIVPTAQTILPDSEDAIKGHFRESPLIADNI 205 (320)
Q Consensus 144 ----------~-~----~~~~~~~GDgAaA~ll~~~~~~---~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~ 205 (320)
+ + ....+.++|||+|+||.+.+.. +. .+.-.+.+.+... ...+ ......
T Consensus 249 e~l~~~~~vfd~~~~~t~~d~~~~~DGAaavvL~s~~~A~~~g~-~~~a~i~g~~~~~--~~p~----------~~~~~~ 315 (418)
T 2iik_A 249 EGLAKLKPAFKKDGSTTAGNSSQVSDGAAAILLARRSKAEELGL-PILGVLRSYAVVG--VPPD----------IMGIGP 315 (418)
T ss_dssp HHHHHCCCSSSTTCCCCSTTBCCCEEEEEEEEEEEHHHHHHHTC-CCCEEEEEEEEEE--CCGG----------GGGGHH
T ss_pred HHHhhCCCcccCCCceeeccccCCCCCceEEEEecHHHHHhcCC-CceEEEEEEEecc--CCch----------hcchhH
Confidence 0 0 0246678999999999876532 11 1222343322111 0000 001223
Q ss_pred HHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHHHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcC
Q 047978 206 DKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEG 285 (320)
Q Consensus 206 ~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g 285 (320)
..+++.+|+++|++++|| +++=.|-.....--...+.||++++++-.+= -...+||...|+=...+..++.....
T Consensus 316 ~~a~~~al~~Agl~~~dI--d~vE~h~af~~~~~~~~~~lg~~~~~vN~~G-G~~a~GHp~GAsG~~~~~~~~~~L~~-- 390 (418)
T 2iik_A 316 AYAIPVALQKAGLTVSDV--DIFEINEAFASQAAYCVEKLRLPPEKVNPLG-GAVALGHPLGCTGARQVITLLNELKR-- 390 (418)
T ss_dssp HHHHHHHHHHHTCCGGGE--EEEEECCSBHHHHHHHHHHHTCCGGGBCTTC-CHHHHCCCHHHHHHHHHHHHHHHHHH--
T ss_pred HHHHHHHHHHcCCCHHHC--CeeeeeccchHHHHHHHHHcCCCccccCCCC-CeeeecCChhhhHHHHHHHHHHHHHh--
Confidence 458899999999999996 3888997665444444688999877653320 01358999888744444444433211
Q ss_pred CCCCCCCCc-eEEEEeeccchhhhheeeee
Q 047978 286 KATTGEELE-WGVLLGFEAGLTVEAIVLRS 314 (320)
Q Consensus 286 ~l~~G~~~d-~vll~~~G~G~~~~a~~l~~ 314 (320)
+.| . +.+....+.|....+++++.
T Consensus 391 --~~~---~~~gl~~~c~ggG~g~a~~~e~ 415 (418)
T 2iik_A 391 --RGK---RAYGVVSMCIGTGMGAAAVFEY 415 (418)
T ss_dssp --HTS---CEEEEEEEEETTTEEEEEEEEE
T ss_pred --cCC---CeeeEEEEeeccchhheEEEec
Confidence 122 3 44443333333445777775
No 48
>1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1
Probab=99.65 E-value=9.3e-16 Score=145.78 Aligned_cols=296 Identities=11% Similarity=0.049 Sum_probs=182.7
Q ss_pred cceEEccccccCCCcccccccHHHHHhhhcC-----Cch--------h---HHHHHHH----HHhhhcccchHHHHHHHH
Q 047978 5 GKFQETQRPQANPANCVYQTDYPDFYFRITS-----SNH--------M---TELKEKF----KRMYILVPKVPKLGKEAV 64 (320)
Q Consensus 5 ~~~~I~a~~~~lP~~~i~~~e~~~~~~~~~~-----~~~--------~---~gi~~~~----r~~~~~~e~~~~la~~Aa 64 (320)
++|.|++++...|.-. +.+++-+.+..+.+ ..| . ..+..++ ++-+..-.....|+.+|+
T Consensus 3 ~~vaI~G~g~~~p~g~-~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~fd~~~~~i~~~~~~~~d~~~~l~l~aa 81 (424)
T 1tqy_A 3 RRVVITGVGVRAPGGN-GTRQFWELLTSGRTATRRISFFDPSPYRSQVAAEADFDPVAEGFGPRELDRMDRASQFAVACA 81 (424)
T ss_dssp CCEEEEEEEEEETTEE-SHHHHHHHHHHTCCCEEECCSSCCTTSSCCEEECCCCCHHHHTCCHHHHHHSCHHHHHHHHHH
T ss_pred CCEEEEeeEEECCCCC-CHHHHHHHHHcCCCceeeCCCcccccCCcceeEEeccCHhhcCCCHHHHHhcCHHHHHHHHHH
Confidence 5799999999999874 56666655421111 000 0 0011100 001111124568999999
Q ss_pred HHHHHHcCCCCCCcC----EEEEEeeCC-C---------------------------CCCCH-HH----HHHHHcCCCcc
Q 047978 65 SKAIKEWGQPISKIT----HLISCSVSG-V---------------------------DMPGA-DY----QLTKLLGLKPS 107 (320)
Q Consensus 65 ~~aL~~ag~~~~dId----~li~~s~t~-~---------------------------~~p~~-a~----~l~~~LGl~~~ 107 (320)
++||+++|+++++|| .|+++++++ + ..|+. +. +|+..||++..
T Consensus 82 ~~AL~dAG~~~~~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ia~~lgl~gp 161 (424)
T 1tqy_A 82 REAFAASGLDPDTLDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEVAWAVGAEGP 161 (424)
T ss_dssp HHHHHHHTCCTTTCCGGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTHHHHSTTHHHHHHHHHHTCCSC
T ss_pred HHHHHHCCCCchhcCCCceEEEEEeCCccHHHHHHHHHHHhhhccCccccChhhhcccccccccchhHhHHHHhcCCCCc
Confidence 999999999999999 688887754 2 11222 34 99999999753
Q ss_pred ------hhhhhhh--------hhcCCCCeEEEEEeecc-ccc---------ccCC-----CCC--CchhhhhhhhhccCc
Q 047978 108 ------VKRVMLT--------AESNAGARVLVVCSEIT-VGT---------FRAP-----SDE--NLSCLVNRAIVGDGT 156 (320)
Q Consensus 108 ------~c~~~l~--------l~~~~~~~~LVv~~e~~-s~~---------~~~~-----~~~--~~~~~~~~~~~GDgA 156 (320)
.|++.++ |++|..+.+||+++|.. ++. ...+ +.. ..+....++++||||
T Consensus 162 ~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~geGa 241 (424)
T 1tqy_A 162 VTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPITPIVVACFDAIRATTARNDDPEHASRPFDGTRDGFVLAEGA 241 (424)
T ss_dssp EEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCCSCGGGCCCTTBTTCCCBCEECEE
T ss_pred eEeecCcccHHHHHHHHHHHHHHCCCCCEEEEeeecccCCHHHHHHHHhhccccCCCCCCCCCccCCCCCCCceeeecce
Confidence 3776554 78899999999999984 220 0011 000 001123578999999
Q ss_pred eEEEEeecCCC---CCCCCeeEEeccCceecCCCcccccccccccceechhHHHHHHHHhhhcCCCCCCCCceEEEEcCC
Q 047978 157 AALIVGACPDI---NTERPLFHIVPTAQTILPDSEDAIKGHFRESPLIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPI 233 (320)
Q Consensus 157 aA~ll~~~~~~---~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~ 233 (320)
+|+||++.+.. + ......+...+........ .....+ .....++++++|+++|++++|| +++.+|+.
T Consensus 242 aavvL~~~~~A~~~g-~~i~a~I~g~~~~~dg~~~----~~p~~~---g~~~~~ai~~al~~agl~~~dI--d~ve~Hgt 311 (424)
T 1tqy_A 242 AMFVLEDYDSALARG-ARIHAEISGYATRCNAYHM----TGLKAD---GREMAETIRVALDESRTDATDI--DYINAHGS 311 (424)
T ss_dssp EEEEEEEHHHHHHTT-CCCCEEEEEEEEEECSSCS----SCCCTT---CHHHHHHHHHHHHHHTCCGGGC--CEEECCCC
T ss_pred eEEEeccHHHHHhCC-CcEEEEEeeeEEcCCCCCC----CCCCCC---HHHHHHHHHHHHHHcCCCHHHC--CEEEecCc
Confidence 99999876431 1 1112233332211111000 001112 2456789999999999999997 39999999
Q ss_pred ChhHHH-----HHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCC--------------------
Q 047978 234 GPAVLD-----QIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKAT-------------------- 288 (320)
Q Consensus 234 ~~~~~~-----~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~-------------------- 288 (320)
+..+-| .+.+.++.+.+++..+ .+-..+||+.+|+-++.|..++..... +.+.
T Consensus 312 gt~~gD~~E~~al~~~f~~~~~~~~v~-s~k~~~GH~~~AaG~~~l~~~~l~l~~-~~ipp~~~~~~~~p~~~~~~v~~~ 389 (424)
T 1tqy_A 312 GTRQNDRHETAAYKRALGEHARRTPVS-SIKSMVGHSLGAIGSLEIAACVLALEH-GVVPPTANLRTSDPECDLDYVPLE 389 (424)
T ss_dssp CCHHHHHHHHHHHHHHTGGGGGGSCEE-CTHHHHCBCTTTHHHHHHHHHHHHHHH-CEECCBTTCCSBBTTBCSCCCBSS
T ss_pred cCcCcCHHHHHHHHHHhcccCCCCeee-ccccccccChhhhHHHHHHHHHHHHHc-CCcCCCCCCCCCCCCCCcccCCCc
Confidence 877543 3455566444444332 134557999999988887775433111 4332
Q ss_pred ----CCCCCceEEEEeeccchhhhheeeeecc
Q 047978 289 ----TGEELEWGVLLGFEAGLTVEAIVLRSIP 316 (320)
Q Consensus 289 ----~G~~~d~vll~~~G~G~~~~a~~l~~~~ 316 (320)
+. ++++..+||.|.+..+++++..+
T Consensus 390 ~~~~~~---~~a~~~sfG~GG~n~~~vl~~~~ 418 (424)
T 1tqy_A 390 ARERKL---RSVLTVGSGFGGFQSAMVLRDAE 418 (424)
T ss_dssp CEECCC---SEEEEEEEETTTEEEEEEEECHH
T ss_pred ccCCCC---CEEEEccccCCceEEEEEEccCC
Confidence 23 78999999999999999998753
No 49
>3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes}
Probab=99.63 E-value=9.9e-15 Score=138.22 Aligned_cols=296 Identities=12% Similarity=0.028 Sum_probs=179.1
Q ss_pred ccceEEccccccCCCcccccccHHHHHhhhcC-----Cch-h-----------HH------HHHHHHHhhhcccchHHHH
Q 047978 4 LGKFQETQRPQANPANCVYQTDYPDFYFRITS-----SNH-M-----------TE------LKEKFKRMYILVPKVPKLG 60 (320)
Q Consensus 4 ~~~~~I~a~~~~lP~~~i~~~e~~~~~~~~~~-----~~~-~-----------~g------i~~~~r~~~~~~e~~~~la 60 (320)
+++|.|+++|.++|.. .+.+++-+.+..+.+ ..+ . .+ |..+ -+..-.....|+
T Consensus 3 ~~~v~ItG~g~~~P~g-~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~v~~fd~~~~i~~~---~~~~~d~~~~l~ 78 (413)
T 3o04_A 3 KRRVVVTGIGAVTPIG-NDAETSWENAKKGVNGVAKMTRLNPDDFPVKIAAELKDFDVEKYLEKK---EARKMDRFTHYA 78 (413)
T ss_dssp CCCEEEEEEEEEBTTB-SSHHHHHHHHHTTCCCEEECCSSCGGGSSCCEEECCSSCCGGGTSCHH---HHTTSCHHHHHH
T ss_pred CCCEEEEEeEEECCCC-CCHHHHHHHHHcCCCceeeCCccccccCccccccccCCCChhhccCHH---HHhhCCHHHHHH
Confidence 4679999999999987 566666665421110 000 0 00 1111 111123457799
Q ss_pred HHHHHHHHHHcCCCCCCcC----EEEEEeeC-----------------C-CCCCC---------HHHHHHHHcCCCcc--
Q 047978 61 KEAVSKAIKEWGQPISKIT----HLISCSVS-----------------G-VDMPG---------ADYQLTKLLGLKPS-- 107 (320)
Q Consensus 61 ~~Aa~~aL~~ag~~~~dId----~li~~s~t-----------------~-~~~p~---------~a~~l~~~LGl~~~-- 107 (320)
.+|+++||+++|+++++|| .|++++++ + ...|. .+.+|+..||++..
T Consensus 79 l~Aa~~AL~dAGl~~~~id~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~gp~~ 158 (413)
T 3o04_A 79 IASAEMAVQDSGLVIDDSNANRVGVWIGSGIGGMETFETQYEIFLNRGHRRVSPFFVPMMIPDMGSGQVSIRFGAKGINS 158 (413)
T ss_dssp HHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCTTTSCTTHHHHHSTTHHHHHHHHHHTCCSCEE
T ss_pred HHHHHHHHHHcCCChhHcCccceEEEEccccCcHHHHHHHHHHHHhcCCCccCchhhhcccccHHHHHHHHHhCCCCcce
Confidence 9999999999999999999 99988874 2 22332 37899999999753
Q ss_pred ----hhhhhhh--------hhcCCCCeEEEEEeeccccc--------------ccCCCCC--CchhhhhhhhhccCceEE
Q 047978 108 ----VKRVMLT--------AESNAGARVLVVCSEITVGT--------------FRAPSDE--NLSCLVNRAIVGDGTAAL 159 (320)
Q Consensus 108 ----~c~~~l~--------l~~~~~~~~LVv~~e~~s~~--------------~~~~~~~--~~~~~~~~~~~GDgAaA~ 159 (320)
.|+++++ |++|..+.+||+++|..... ..+|... ..+....++++||||+|+
T Consensus 159 ~v~~aCss~~~Al~~A~~~I~~G~~d~~lvgG~e~~~~~~~~~~~~~~~~ls~~~~p~~~~~pfd~~~~g~~~gdGAaav 238 (413)
T 3o04_A 159 TTVTACATATNSIGDAFKVIERGDADAMITGGAEAPITKMSLAGFTANKALSLNPDPETACRPFDKDRDGFIIGEGAGIV 238 (413)
T ss_dssp CCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCCCTTTSCCTTBTTCCSBCBBCEEEEE
T ss_pred eecchhHHHHHHHHHHHHHHHcCCCCEEEEeEEcccCCHHHHHHHHhcccccCCCCCCCCcCCCcCCCCCceEeccEEEE
Confidence 4877654 78899999999999983110 1111110 011123578899999999
Q ss_pred EEeecCCC---CCCCCeeEEeccCceecCCCcccccccccccceechhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChh
Q 047978 160 IVGACPDI---NTERPLFHIVPTAQTILPDSEDAIKGHFRESPLIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPA 236 (320)
Q Consensus 160 ll~~~~~~---~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~ 236 (320)
||++.+.. + ..+...+...+........ ..... ......++++++|+++|++++|| +++.+|..+..
T Consensus 239 vL~~~~~A~~~g-~~i~a~i~g~~~~~dg~~~----~~~~~---~~~~~~~a~~~al~~agl~~~dI--d~ve~HgtgT~ 308 (413)
T 3o04_A 239 ILEEYEHAKARG-AKIYAEIVGYGATGDAYHI----TAPAP---NGEGAARAMKMAIDDAGLTPDKV--DYINAHGTSTP 308 (413)
T ss_dssp EEEEHHHHHHHT-CCCCEEEEEEEEEECCSCS----SSCCG---GGHHHHHHHHHHHHHHTCCGGGC--CEEECCCCCCH
T ss_pred EEeeHHHHHhCC-CeEEEEEEEEEEcCCCCCC----CCCCC---CHHHHHHHHHHHHHHcCCCHHHc--CEEEEeCCcCc
Confidence 99975421 1 1122333332211100000 00011 12456789999999999999997 39999998876
Q ss_pred HHHHH-----HHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCC-----------------C----
Q 047978 237 VLDQI-----EGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATT-----------------G---- 290 (320)
Q Consensus 237 ~~~~~-----~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~-----------------G---- 290 (320)
.-|.+ .+.++...+++..+ ..-..+||+.+|+=.+.+..++..... +.+.| .
T Consensus 309 ~~d~~e~~al~~~~~~~~~~~~v~-s~k~~~GH~~gAsG~~~~~~~~~~l~~-~~ipp~~~~~~~~~~~~~~~~~~~~~~ 386 (413)
T 3o04_A 309 YNDEYETQAIKTVFGEHAKKLAIS-STKSMTGHTLGASGGIEAIFALLTIRD-NIIAPTIHLKNQDEVCDLDYVPNEARE 386 (413)
T ss_dssp HHHHHHHHHHHHHHGGGTTTSEEE-CTHHHHCBCGGGHHHHHHHHHHHHHHH-TEECCBTTCCSBCSSCCSCCCBSSCEE
T ss_pred ccCHHHHHHHHHHhcccCCCCcee-cccccccccHHHHHHHHHHHHHHHHHh-CCcCCCCCCCCCCCCCCcccCCCcccC
Confidence 55433 34444333333221 134457999988866666555442110 32210 0
Q ss_pred CCCceEEEEeeccchhhhheeeeec
Q 047978 291 EELEWGVLLGFEAGLTVEAIVLRSI 315 (320)
Q Consensus 291 ~~~d~vll~~~G~G~~~~a~~l~~~ 315 (320)
.+.++++.-+||.|.+-.+++++..
T Consensus 387 ~~~~~~~~~sfgfgG~na~~vl~~~ 411 (413)
T 3o04_A 387 ANVNVVISNSFGFGGHNATLVFKRI 411 (413)
T ss_dssp CCCCEEEEEEEETTTEEEEEEEECC
T ss_pred CCCCEEEEeCccCCceEEEEEEEeC
Confidence 0126777889999999888998864
No 50
>3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium}
Probab=99.59 E-value=2.7e-14 Score=134.06 Aligned_cols=214 Identities=13% Similarity=0.024 Sum_probs=145.2
Q ss_pred cccchHHHHHHHHHHHHHHc-CCCCCCcCEEEEEeeCC-CC-CCCHHHHHHHHcCCCcc--------hhhhhhh------
Q 047978 52 LVPKVPKLGKEAVSKAIKEW-GQPISKITHLISCSVSG-VD-MPGADYQLTKLLGLKPS--------VKRVMLT------ 114 (320)
Q Consensus 52 ~~e~~~~la~~Aa~~aL~~a-g~~~~dId~li~~s~t~-~~-~p~~a~~l~~~LGl~~~--------~c~~~l~------ 114 (320)
.+++..+|+.+|+++||+++ |++++|||.|++++.++ +. .|..+.+++..+|++.. .|+++++
T Consensus 23 ~~~~~~~L~~~a~~~Al~~a~gi~~~~Id~v~~g~~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~v~~aCss~l~Al~~A~ 102 (387)
T 3goa_A 23 RNVRAEDLSAHLMRSLLARNPSLTAATLDDIYWGCVQQTLEQGFNIARNAALLAEIPHSVPAVTVNRLCGSSMQALHDAA 102 (387)
T ss_dssp TTSCHHHHHHHHHHHHHHHCTTSCGGGCCEEEEECSCCSBTTTTTHHHHHHHHTTCCTTSCCEEEECGGGHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHhccCCCHHHcCEEEEEcccCCcccccHHHHHHHHHcCCCCCCcEeEecCcchHHHHHHHHHH
Confidence 46789999999999999999 99999999999999888 44 78899999999999632 3877654
Q ss_pred --hhcCCCCeEEEEEeeccccc----------------------------------------------------------
Q 047978 115 --AESNAGARVLVVCSEITVGT---------------------------------------------------------- 134 (320)
Q Consensus 115 --l~~~~~~~~LVv~~e~~s~~---------------------------------------------------------- 134 (320)
+++|..+++||+++|..|..
T Consensus 103 ~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~tre~~~~~a~~s~~~A~~a~~~ 182 (387)
T 3goa_A 103 RMIMTGDAQVCLVGGVEHMGHVPMSHGVDFHPGLSRNVAKAAGMMGLTAEMLSRLHGISREMQDQFAARSHARAWAATQS 182 (387)
T ss_dssp HHHHTTSCSEEEEEEEECTTTSCTTTTBCCCTTCC-------CCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCCCEEEEEEEecCCCCccccccCcCcccccccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHhc
Confidence 78899999999999977631
Q ss_pred --ccCC-----------------CCCCch----------------------hhhhhhhhccCceEEEEeecCCC--CCCC
Q 047978 135 --FRAP-----------------SDENLS----------------------CLVNRAIVGDGTAALIVGACPDI--NTER 171 (320)
Q Consensus 135 --~~~~-----------------~~~~~~----------------------~~~~~~~~GDgAaA~ll~~~~~~--~~~~ 171 (320)
|..+ .|+... .....+..+|||+|+||.+.+.. .-..
T Consensus 183 g~f~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t~e~l~~~~p~f~~~~g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~ 262 (387)
T 3goa_A 183 GAFKTEIIPTGGHDADGVLKQFNYDEVIRPETTVEALSTLRPAFDPVSGTVTAGTSSALSDGAAAMLVMSESRARELGLK 262 (387)
T ss_dssp TTTTTTBCCEEEECTTSCEEEECSCTTCCTTCCHHHHTTSCCSSCTTTCCCCGGGBCCCEEEEEEEEEEEHHHHHHTTCC
T ss_pred CCcccceeeeeeccccCcccccccccccCCCCCHHHHhcCCCcccCCCCceecccCCCcCccEEEEEEecHHHHHHcCCC
Confidence 0000 000000 01234567899999999876531 0011
Q ss_pred CeeEEeccCceecCCCcccccccccccceechhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHHHHHHcCC---C
Q 047978 172 PLFHIVPTAQTILPDSEDAIKGHFRESPLIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGL---E 248 (320)
Q Consensus 172 ~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~---~ 248 (320)
+...+...+...... . .. ......+++.+++++|++++|| +++-+|...........+.||+ +
T Consensus 263 ~~a~i~g~~~~~~~~--~-------~~---~~~~~~a~~~al~~agl~~~di--d~ve~h~~f~~~~~~~~~~lg~~~~~ 328 (387)
T 3goa_A 263 PRARIRSMAVVGCDP--S-------IM---GYGPVPASKLALKKAGLSASDI--DVFEMNEAFAAQILPCIKDLGLMEQI 328 (387)
T ss_dssp CCEEEEEEEEEECCT--T-------ST---TCTHHHHHHHHHHHHTCCGGGC--SEEEECCSBHHHHHHHHHHTTCGGGH
T ss_pred ccEEEEEEEEcCCCC--C-------cc---hHHHHHHHHHHHHHcCCCHHHc--CEEEEeCcchHHHHHHHHHhCCCcCC
Confidence 223444332221100 0 00 1234578899999999999997 3899999998777777889998 5
Q ss_pred cchhhhhHHHHhccCCcccchHHHHHHHHHHh
Q 047978 249 KTKLRETRHVLSEYGNMASATVLFVLDEMRKR 280 (320)
Q Consensus 249 ~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~ 280 (320)
.+++-.+ .-...+||...|+=...+..++..
T Consensus 329 ~~~vn~~-gg~~~~GH~~gasG~~~~~~~~~~ 359 (387)
T 3goa_A 329 DEKINLN-GGAIALGHPLGCSGARISTTLINL 359 (387)
T ss_dssp HHHBSTT-CCHHHHCCCHHHHHHHHHHHHHHH
T ss_pred CccCCCC-CchhcccCCHHHHHHHHHHHHHHH
Confidence 5554321 012347999766655555555544
No 51
>1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1
Probab=99.59 E-value=2.6e-14 Score=135.44 Aligned_cols=294 Identities=13% Similarity=0.039 Sum_probs=178.6
Q ss_pred cceEEccccccCCCcccccccHHHHHhhhcC-----Cch------------------hHHHHHHHHHhhhcccchHHHHH
Q 047978 5 GKFQETQRPQANPANCVYQTDYPDFYFRITS-----SNH------------------MTELKEKFKRMYILVPKVPKLGK 61 (320)
Q Consensus 5 ~~~~I~a~~~~lP~~~i~~~e~~~~~~~~~~-----~~~------------------~~gi~~~~r~~~~~~e~~~~la~ 61 (320)
++|.|++++...|... +.+++-+.+..+.+ ..| ...+..++.+ .-....+|+.
T Consensus 7 ~~v~I~G~g~~~p~g~-~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~i~~fd~~~~~~~~~~~---~~d~~~~l~l 82 (416)
T 1e5m_A 7 KRVVVTGLGAITPIGN-TLQDYWQGLMEGRNGIGPITRFDASDQACRFGGEVKDFDATQFLDRKEAK---RMDRFCHFAV 82 (416)
T ss_dssp CCEEEEEEEEEBTTBS-SHHHHHHHHHTTCCCEEECCSSCCTTSSCCEEECCCSCCGGGTSCHHHHH---TSCHHHHHHH
T ss_pred CCEEEEeeeEECCCCC-CHHHHHHHHHcCCCeEeeCCccccccCccceeEEeCCCCccccCCHHHHH---hcCHHHHHHH
Confidence 6799999999999873 45555554421110 000 0011111111 1123468999
Q ss_pred HHHHHHHHHcCCCCCCcC----EEEEEeeCCC------------------CC---------CCHHHHHHHHcCCCcc---
Q 047978 62 EAVSKAIKEWGQPISKIT----HLISCSVSGV------------------DM---------PGADYQLTKLLGLKPS--- 107 (320)
Q Consensus 62 ~Aa~~aL~~ag~~~~dId----~li~~s~t~~------------------~~---------p~~a~~l~~~LGl~~~--- 107 (320)
+|+++||+++|+++++|| .|+++++++. .. +..+.+|+..||++..
T Consensus 83 ~aa~~Al~dAg~~~~~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~gp~~~ 162 (416)
T 1e5m_A 83 CASQQAINDAKLVINELNADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGAKGPNNC 162 (416)
T ss_dssp HHHHHHHHHHTCCCCTTTGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCSCEEC
T ss_pred HHHHHHHHHcCCChhhcCccceEEEEeecCCcHHHHHHHHHHHHhcCcccCChhHhhhhhhHHHHHHHHHHhCCCCceeC
Confidence 999999999999999999 7888876541 11 2468999999999742
Q ss_pred ---hhhhhhh--------hhcCCCCeEEEEEeec-ccccc---------cC-----CCC--CCchhhhhhhhhccCceEE
Q 047978 108 ---VKRVMLT--------AESNAGARVLVVCSEI-TVGTF---------RA-----PSD--ENLSCLVNRAIVGDGTAAL 159 (320)
Q Consensus 108 ---~c~~~l~--------l~~~~~~~~LVv~~e~-~s~~~---------~~-----~~~--~~~~~~~~~~~~GDgAaA~ 159 (320)
.|++.++ |++|..+.+||+++|. .++.. .. |+. +..+....++++||||+|+
T Consensus 163 v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~geGaaav 242 (416)
T 1e5m_A 163 TVTACAAGSNAIGDAFRLVQNGYAKAMICGGTEAAITPLSYAGFASARALSFRNDDPLHASRPFDKDRDGFVMGEGSGIL 242 (416)
T ss_dssp CCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCGGGTCCTTBTTCCSBCBBCEEEEE
T ss_pred ccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHcCCccCCCCCCccccccCccCCCCceeeeeEEEE
Confidence 3776544 7889999999999997 34210 00 100 0001122478999999999
Q ss_pred EEeecCCC---CCCCCeeEEeccCceecCCCcccccccccccceechhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChh
Q 047978 160 IVGACPDI---NTERPLFHIVPTAQTILPDSEDAIKGHFRESPLIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPA 236 (320)
Q Consensus 160 ll~~~~~~---~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~ 236 (320)
||++.+.. + .....++.+.+....... +. ....+ .....++++++|+++|++++|| +++.+|+.+..
T Consensus 243 vL~~~~~A~~~g-~~i~a~I~g~~~~~d~~~---~~-~p~~~---~~~~~~ai~~al~~agl~~~dI--d~ve~Hgtgt~ 312 (416)
T 1e5m_A 243 ILEELESALARG-AKIYGEMVGYAMTCDAYH---IT-APVPD---GRGATRAIAWALKDSGLKPEMV--SYINAHGTSTP 312 (416)
T ss_dssp EEEEHHHHHHTT-CCCCEEEEEEEEEECCSC---SS-SCCTT---CHHHHHHHHHHHHHHTCCGGGC--CEEECCCCSCH
T ss_pred EECcHHHHHHCC-CeEEEEEEEEEEccCCCC---CC-CCCCC---HHHHHHHHHHHHHHcCCCHhHC--CEEEEECCCCc
Confidence 99876431 1 111233333221111100 00 00111 2556789999999999999997 39999999887
Q ss_pred HHHH-----HHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCC-------C--------------
Q 047978 237 VLDQ-----IEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATT-------G-------------- 290 (320)
Q Consensus 237 ~~~~-----~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~-------G-------------- 290 (320)
+.|. +.+.++.+.+++..+ .+-..+||+.+|+=.+.+..++..... +.+.| .
T Consensus 313 ~~D~~E~~al~~~~g~~~~~~~v~-s~k~~~GH~~gAaG~~~~i~~~~~l~~-~~ipp~~~~~~~~p~~~~~~v~~~~~~ 390 (416)
T 1e5m_A 313 ANDVTETRAIKQALGNHAYNIAVS-STKSMTGHLLGGSGGIEAVATVMAIAE-DKVPPTINLENPDPECDLDYVPGQSRA 390 (416)
T ss_dssp HHHHHHHHHHHHHHGGGGGGSEEE-CTHHHHCBCGGGHHHHHHHHHHHHHHH-TEECCBTTCSSBCTTCCSCCCBSSCEE
T ss_pred CcCHHHHHHHHHHHcccCCCCeee-CcchhhcccHHHHHHHHHHHHHHHHhc-CCcCCCCCCCCCCCCCCccccCCcccc
Confidence 6543 445566544444432 134558999998876666655433111 33210 0
Q ss_pred CCCceEEEEeeccchhhhheeeee
Q 047978 291 EELEWGVLLGFEAGLTVEAIVLRS 314 (320)
Q Consensus 291 ~~~d~vll~~~G~G~~~~a~~l~~ 314 (320)
.+.++++.-+||-|.+-.+++|+.
T Consensus 391 ~~~~~a~~~sfGfGG~n~~~vl~~ 414 (416)
T 1e5m_A 391 LIVDVALSNSFGFGGHNVTLAFKK 414 (416)
T ss_dssp CCCSEEEEEEEETTTEEEEEEEEC
T ss_pred CCCCEEEEccccCCCeeEEEEEEe
Confidence 011577888999998888888864
No 52
>3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A
Probab=99.58 E-value=1.1e-14 Score=138.51 Aligned_cols=292 Identities=12% Similarity=0.053 Sum_probs=184.4
Q ss_pred ccceEEccccccCCCcccccccHHHHHhhhcC-----Cch------------hHH------HHHHHHHhhhcccchHHHH
Q 047978 4 LGKFQETQRPQANPANCVYQTDYPDFYFRITS-----SNH------------MTE------LKEKFKRMYILVPKVPKLG 60 (320)
Q Consensus 4 ~~~~~I~a~~~~lP~~~i~~~e~~~~~~~~~~-----~~~------------~~g------i~~~~r~~~~~~e~~~~la 60 (320)
.++|.|+++|...|--. +.+++-+.+..+.+ ..| +.. |..++ +..-.....|+
T Consensus 17 ~~~v~I~G~g~~~p~g~-~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~v~~fd~~~~i~~~~---~~~~d~~~~l~ 92 (427)
T 3ho9_A 17 KRRVVVTGLGMLSPVGN-TVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCEDIISRKE---QRKMDAFIQYG 92 (427)
T ss_dssp CCCEEEEEEEEEBTTBS-SHHHHHHHHHTTCCCEEECCSSCCTTCSCCEEECCSSCCCTTTSCHHH---HTTSCHHHHHH
T ss_pred CCCEEEEeeeEECCCCC-CHHHHHHHHHcCCCceeeCCccccccCccceeeEcCCCChhhcCCHHH---HhhCCHHHHHH
Confidence 46799999999999864 55655555421110 000 000 11111 11112356799
Q ss_pred HHHHHHHHHHcCCCCCCcC----EEEEEeeCC---------------------------CCCCCHHHHHHHHcCCCcc--
Q 047978 61 KEAVSKAIKEWGQPISKIT----HLISCSVSG---------------------------VDMPGADYQLTKLLGLKPS-- 107 (320)
Q Consensus 61 ~~Aa~~aL~~ag~~~~dId----~li~~s~t~---------------------------~~~p~~a~~l~~~LGl~~~-- 107 (320)
.+|+++||+++|+++++|| .+++++++. ...+..+.+|+..||++..
T Consensus 93 l~aa~~AL~dAGl~~~~i~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl~Gp~~ 172 (427)
T 3ho9_A 93 IVAGVQAMQDSGLEITEENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSI 172 (427)
T ss_dssp HHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCSCEE
T ss_pred HHHHHHHHHHCCCCcccccccceEEEEccccccHHHHHHHHHHHHhcCccccCcceeccccchHHHHHHHHHhCCCCCee
Confidence 9999999999999999999 588777631 1234568899999999753
Q ss_pred ----hhhhhhh--------hhcCCCCeEEEEEeecccccc---------------------cCCCCCCchhhhhhhhhcc
Q 047978 108 ----VKRVMLT--------AESNAGARVLVVCSEITVGTF---------------------RAPSDENLSCLVNRAIVGD 154 (320)
Q Consensus 108 ----~c~~~l~--------l~~~~~~~~LVv~~e~~s~~~---------------------~~~~~~~~~~~~~~~~~GD 154 (320)
.|++.++ |++|..+.+||+++|..+..+ ..|-+ ....++++||
T Consensus 173 ~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~~~ls~~~~~~~~~~~pfd----~~~~G~v~ge 248 (427)
T 3ho9_A 173 SIATAATSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPWD----KERDGFVLGD 248 (427)
T ss_dssp CCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCHHHHCCTTB----TTCCSBCBBC
T ss_pred cccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHhccCcccCCCCCCcccCCcc----CCCCCceeee
Confidence 4776544 788999999999999885210 01111 1235789999
Q ss_pred CceEEEEeecCCC--CCCCCeeEEeccCceecCCCcccccccccccceechhHHHHHHHHhhhcCCCCCCCCceEEEEc-
Q 047978 155 GTAALIVGACPDI--NTERPLFHIVPTAQTILPDSEDAIKGHFRESPLIADNIDKFLAESFDQVSLNDHDWNSLFWMMH- 231 (320)
Q Consensus 155 gAaA~ll~~~~~~--~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h- 231 (320)
||+|+||++.+.. .-..+...+...+...... .. ...... .....++++++|+++|++++|| +++.+|
T Consensus 249 GAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~--~~--~~p~~~---~~~~~~ai~~al~~Agl~~~dI--d~ve~Hg 319 (427)
T 3ho9_A 249 GAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAY--HM--TSPPEN---GAGAALAMANALRDAGIEASQI--GYVNAHG 319 (427)
T ss_dssp EEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCS--BT--TBCCTT---CHHHHHHHHHHHHHHTCCGGGC--CEEECCC
T ss_pred eEEEEEEccHHHHHHCCCcEEEEEEEEeecCCCC--Cc--CCCCCC---HHHHHHHHHHHHHHcCCCHHHc--cEEEecC
Confidence 9999999975421 0011223343322111000 00 001111 2456688999999999999997 399999
Q ss_pred ----CCChhHHHHHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCC------------------
Q 047978 232 ----PIGPAVLDQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATT------------------ 289 (320)
Q Consensus 232 ----~~~~~~~~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~------------------ 289 (320)
+.+..-...+.+.++.+.+++..+ ..-..+||+.+|+=.+.|..++..... +.+.|
T Consensus 320 tgT~~~d~~e~~a~~~~~g~~~~~~~v~-s~k~~~GH~~gAsG~~~~i~~~~~l~~-~~ipp~~~~~~~~~~~~~~~~~~ 397 (427)
T 3ho9_A 320 TSTPAGDKAEAQAVKTIFGEAASRVLVS-STKSMTGHLLGAAGAVESIYSILALRD-QAVPPTINLDNPDEGCDLDFVPH 397 (427)
T ss_dssp CSCHHHHHHHHHHHHHHHGGGGGTSEEE-CTHHHHCBCGGGHHHHHHHHHHHHHHH-TEECCBTTCSSBCTTCCCBCCBS
T ss_pred CcCCCcCHHHHHHHHHHhcccCCCeEEe-cchHhhccCHHHHHHHHHHHHHHHHhc-CCCCCCCCCCCCCCCCCcccccc
Confidence 666666777788888776665442 135568999999866666555443211 32210
Q ss_pred ----CCCCceEEEEeeccchhhhheeeee
Q 047978 290 ----GEELEWGVLLGFEAGLTVEAIVLRS 314 (320)
Q Consensus 290 ----G~~~d~vll~~~G~G~~~~a~~l~~ 314 (320)
-.+.++++.-+||.|.+.++++|+.
T Consensus 398 ~~~~~~~~~~a~~~sfGfgG~na~~vl~~ 426 (427)
T 3ho9_A 398 EARQVSGMEYTLCNSFGFGGTNGSLIFKK 426 (427)
T ss_dssp SCEECSSCCEEEEEEEETTTEEEEEEEEC
T ss_pred ccccCCCCCEEEEeCccCCceeEEEEEEe
Confidence 0012788889999999998888874
No 53
>1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A
Probab=99.58 E-value=3.9e-14 Score=134.80 Aligned_cols=298 Identities=12% Similarity=0.087 Sum_probs=180.7
Q ss_pred CCcccceEEccccccCCCcccccccHHHHHhhhcC-----Cchh--------HH----HHHHHHHhhh----cccchHHH
Q 047978 1 MALLGKFQETQRPQANPANCVYQTDYPDFYFRITS-----SNHM--------TE----LKEKFKRMYI----LVPKVPKL 59 (320)
Q Consensus 1 ~~~~~~~~I~a~~~~lP~~~i~~~e~~~~~~~~~~-----~~~~--------~g----i~~~~r~~~~----~~e~~~~l 59 (320)
|..|++|.|+++|..+|.. .+.+++-+.+..+.+ ..|. .+ +... ..+.. .-.....|
T Consensus 19 ~m~m~~v~ItG~g~~~P~g-~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~v~~fd~~-~~~~~~~~~~~d~~~~l 96 (430)
T 1ox0_A 19 HMKLNRVVVTGYGVTSPIG-NTPEEFWNSLATGKIGIGGITKFDHSDFDVHNAAEIQDFPFD-KYFVKKDTNRFDNYSLY 96 (430)
T ss_dssp SCCCCCEEEEEEEEEBTTB-SSHHHHHHHHHHTCCCEEECCSSCCTTSSCCEEECCSSCCHH-HHCCGGGGGTCCHHHHH
T ss_pred cccCCCEEEEEEEEECCCc-CCHHHHHHHHHcCCCeeeeCCcccccCCccceeeeccCCChh-hcCCHHHHHhcCHHHHH
Confidence 3335789999999999987 455666555421111 0010 00 1000 11111 11234689
Q ss_pred HHHHHHHHHHHcCCCCCCcC----EEEEEeeCC-C---------------------C----CC-CHHHHHHHHcCCCcc-
Q 047978 60 GKEAVSKAIKEWGQPISKIT----HLISCSVSG-V---------------------D----MP-GADYQLTKLLGLKPS- 107 (320)
Q Consensus 60 a~~Aa~~aL~~ag~~~~dId----~li~~s~t~-~---------------------~----~p-~~a~~l~~~LGl~~~- 107 (320)
+.+|+++||+++|+++++|| .++++++++ + . .| ..+.+|+..||++..
T Consensus 97 ~l~aa~~AL~dAG~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl~Gp~ 176 (430)
T 1ox0_A 97 ALYAAQEAVNHANLDVEALNRDRFGVIVASGIGGIKEIEDQVLRLHEKGPKRVKPMTLPKALPNMASGNVAMRFGANGVC 176 (430)
T ss_dssp HHHHHHHHHHHTTCCTTTSCGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCSCE
T ss_pred HHHHHHHHHHHcCCChhhcCccceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhccchhHHHHHHHHHhcCCCce
Confidence 99999999999999999999 577777654 1 1 12 368899999999753
Q ss_pred -----hhhhhhh--------hhcCCCCeEEEEEeecccccc----------cC----CCCC--CchhhhhhhhhccCceE
Q 047978 108 -----VKRVMLT--------AESNAGARVLVVCSEITVGTF----------RA----PSDE--NLSCLVNRAIVGDGTAA 158 (320)
Q Consensus 108 -----~c~~~l~--------l~~~~~~~~LVv~~e~~s~~~----------~~----~~~~--~~~~~~~~~~~GDgAaA 158 (320)
.|++.++ |++|..+.+||+++|.....+ .. |... ..+....++++||||+|
T Consensus 177 ~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~~~ls~~~~p~~~~~pFd~~~~g~~~geGAaa 256 (430)
T 1ox0_A 177 KSINTACSSSNDAIGDAFRSIKFGFQDVMLVGGTEASITPFAIAGFQALTALSTTEDPTRASIPFDKDRNGFVMGEGSGM 256 (430)
T ss_dssp ECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCSSTTSSSCTTBTTCCSBCBCCEEEE
T ss_pred EeecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhCCCccCCCCCCCCCCCCCCCCCCccccceEEE
Confidence 3776544 788999999999999853211 11 1100 01122357899999999
Q ss_pred EEEeecCCC---CCCCCeeEEeccCceecCCCcccccccccccceechhHHHHHHHHhhhcCCCCCCCCceEEEEcCCCh
Q 047978 159 LIVGACPDI---NTERPLFHIVPTAQTILPDSEDAIKGHFRESPLIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGP 235 (320)
Q Consensus 159 ~ll~~~~~~---~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~ 235 (320)
+||++.+.. + .....++...+....... + ...... .....++++++|+++|++++|| +++.+|+.+.
T Consensus 257 vvL~~~~~A~~~g-~~i~a~I~g~~~~~dg~~---~-~~p~~~---~~~~~~ai~~al~~Agl~~~dI--d~ve~Hgtgt 326 (430)
T 1ox0_A 257 LVLESLEHAEKRG-ATILAEVVGYGNTCDAYH---M-TSPHPE---GQGAIKAIKLALEEAEISPEQV--AYVNAHGTST 326 (430)
T ss_dssp EEEEEHHHHHHTT-CCCCEEEEEEEEEECCSC---S-SSCCTT---CHHHHHHHHHHHHHHTCCGGGC--CCEECCCCSC
T ss_pred EEECcHHHHHhCC-CceEEEEEEEEEecCCCC---C-CCCCCC---hHHHHHHHHHHHHHhCcCHHHc--CEEEEeCCcC
Confidence 999876431 1 112233433221111100 0 000111 2566789999999999999997 3999999998
Q ss_pred hHHHH-----HHHHcCCCcchhhh-hHHHHhccCCcccchHHHHHHHHHHhchhcCCCCC-----------------C--
Q 047978 236 AVLDQ-----IEGKLGLEKTKLRE-TRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATT-----------------G-- 290 (320)
Q Consensus 236 ~~~~~-----~~~~lg~~~e~~~~-~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~-----------------G-- 290 (320)
.+.+. +.+.++- ++.. + +-..+||+.+|+=.+.+..++..... +.+.| .
T Consensus 327 ~~~D~~E~~al~~~~g~---~~~v~s--~k~~~GH~~gAaG~~~~i~~~~~l~~-~~ipp~~~~~~~~p~~~~~~v~~~~ 400 (430)
T 1ox0_A 327 PANEKGESGAIVAVLGK---EVPVSS--TKSFTGHLLGAAGAVEAIVTIEAMRH-NFVPMTAGTSEVSDYIEANVVYGQG 400 (430)
T ss_dssp HHHHHHHHHHHHHHHCS---SSEEEC--THHHHCBCGGGHHHHHHHHHHHHHHH-TEECCBSSCCSBCTTCCSEECBSSC
T ss_pred cccCHHHHHHHHHHhCC---Cceecc--cccccccchhhHHHHHHHHHHHHHhc-CccCCCCCCCCCCCCCCcccCCCCC
Confidence 77653 3344542 1211 1 23447999998877666665433111 32210 0
Q ss_pred --CCCceEEEEeeccchhhhheeeeecc
Q 047978 291 --EELEWGVLLGFEAGLTVEAIVLRSIP 316 (320)
Q Consensus 291 --~~~d~vll~~~G~G~~~~a~~l~~~~ 316 (320)
.+.++++.-+||.|.+..+++|+..+
T Consensus 401 ~~~~~~~a~~~sfGfGG~na~~vl~~~~ 428 (430)
T 1ox0_A 401 LEKEIPYAISNTFGFGGHNAVLAFKRWE 428 (430)
T ss_dssp EECCCSEEEEEEEETTTEEEEEEEECCC
T ss_pred cCCCCCEEEEeCccCCCceEEEEEeecC
Confidence 01267888999999998889988654
No 54
>1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1
Probab=99.58 E-value=2.3e-14 Score=135.50 Aligned_cols=290 Identities=12% Similarity=0.100 Sum_probs=183.1
Q ss_pred cceEEccccccCCCcccccccHHHHHhhhcC-----Cch------------h-----HHHHHHHHHhhhcccchHHHHHH
Q 047978 5 GKFQETQRPQANPANCVYQTDYPDFYFRITS-----SNH------------M-----TELKEKFKRMYILVPKVPKLGKE 62 (320)
Q Consensus 5 ~~~~I~a~~~~lP~~~i~~~e~~~~~~~~~~-----~~~------------~-----~gi~~~~r~~~~~~e~~~~la~~ 62 (320)
++|.|+++|...|--. +.+++-+.+..+.+ ..| + ..+.. +.+..-....+|+.+
T Consensus 2 ~~v~I~G~g~~~p~g~-~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~---~~~~~~d~~~~l~~~ 77 (408)
T 1j3n_A 2 RRVVVTGLGALTPIGV-GQEAFHKAQLAGKSGVRPITRFDASALPVRIAAEVDVDPGAYLDR---KELRRLDRFVQYALI 77 (408)
T ss_dssp CCEEEEEEEEEETTEE-SHHHHHHHHHHTCCCEEECCSSCCTTSSCCEEECCCCCGGGTSCH---HHHTTSCHHHHHHHH
T ss_pred CCEEEEEeEEECCCCC-CHHHHHHHHHcCCCeeeeccccCcccCccceEEEEccChhhcCCH---HHHHhcCHHHHHHHH
Confidence 6799999999999874 55555554421110 000 0 00111 111112345789999
Q ss_pred HHHHHHHHcCCCCCCcCE----EEEEeeCC-CC-------------------------CC-CHHHHHHHHcCCCcc----
Q 047978 63 AVSKAIKEWGQPISKITH----LISCSVSG-VD-------------------------MP-GADYQLTKLLGLKPS---- 107 (320)
Q Consensus 63 Aa~~aL~~ag~~~~dId~----li~~s~t~-~~-------------------------~p-~~a~~l~~~LGl~~~---- 107 (320)
|+++||+++|+++++||. ++++++++ +. .| ..+.+|+..||++..
T Consensus 78 aa~~AL~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~gp~~~v 157 (408)
T 1j3n_A 78 AAQLALEDAGLKPEDLDPERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMRYGFTGPSSTV 157 (408)
T ss_dssp HHHHHHHHHTCCGGGSCGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCSCBCCB
T ss_pred HHHHHHHHcCCCccccCCCceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhhhhhhHHHHHHHHHhCCCCceeCc
Confidence 999999999999999994 66776654 21 23 468899999999753
Q ss_pred --hhhhhhh--------hhcCCCCeEEEEEeecc-ccc---------ccC-----------CCCCCchhhhhhhhhccCc
Q 047978 108 --VKRVMLT--------AESNAGARVLVVCSEIT-VGT---------FRA-----------PSDENLSCLVNRAIVGDGT 156 (320)
Q Consensus 108 --~c~~~l~--------l~~~~~~~~LVv~~e~~-s~~---------~~~-----------~~~~~~~~~~~~~~~GDgA 156 (320)
.|++.++ +++|..+.+||+++|.. ++. ... |-| ....++++||||
T Consensus 158 ~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd----~~~dg~v~geGa 233 (408)
T 1j3n_A 158 VTACATGADALGSALRMIQLGEADLVLAGGTEAAITPMAIGAFAVMRALSTRNEEPEKASRPFT----LSRDGFVMGEGA 233 (408)
T ss_dssp CCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCHHHHCCTTB----TTCCCBCBBCEE
T ss_pred cCchHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHhcccccCCCCCCCcCcccCc----CCCCceEEeeeE
Confidence 3776544 78899999999999974 220 111 111 122478999999
Q ss_pred eEEEEeecCCC---CCCCCeeEEeccCceecCCCcccccccccccceechhHHHHHHHHhhhcCCCCCCCCceEEEEcCC
Q 047978 157 AALIVGACPDI---NTERPLFHIVPTAQTILPDSEDAIKGHFRESPLIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPI 233 (320)
Q Consensus 157 aA~ll~~~~~~---~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~ 233 (320)
+|+||++.+.. + .....++...+....... + ...... .....++++++|+++|++++|| +++.+|+.
T Consensus 234 aavvL~~~~~A~~~g-~~i~a~i~g~~~~~d~~~---~-~~p~~~---~~~~~~ai~~al~~Agl~~~dI--d~ve~Hgt 303 (408)
T 1j3n_A 234 GVLVLEAYEHAKKRG-ARIYAELVGFGRSADAHH---I-TEPHPE---GKGAALAMARALKDAGIAPEQV--GYINAHGT 303 (408)
T ss_dssp EEEEEEEHHHHHHTT-CCCCEEEEEEEEEECCSC---S-SCCCTT---CHHHHHHHHHHHHHHTCCGGGC--CEEECCCC
T ss_pred EEEEEeeHHHHHhCC-CcEEEEEEEEEEcCCCCC---C-CCCCCC---HHHHHHHHHHHHHHcCCCHHHc--CEEEEeCC
Confidence 99999875431 1 112233433221111100 0 001111 2556788999999999999997 39999999
Q ss_pred ChhH-----HHHHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCCC------------------
Q 047978 234 GPAV-----LDQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTG------------------ 290 (320)
Q Consensus 234 ~~~~-----~~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G------------------ 290 (320)
+..+ +..+.+.||.+.+++..+ ..-..+||+.+|+-++.|..++..... +.+.|-
T Consensus 304 gt~~gD~~E~~al~~~~g~~~~~~~v~-s~k~~~GH~~~AsG~~~li~~~l~l~~-~~ipp~~~~~~~~~~~~~~~v~~~ 381 (408)
T 1j3n_A 304 STPVGDRAEVLAIKRVFGDHAKRLMVS-STKSMIGHLLGAAGAVEAIATVQALYH-GVIPPTINLEDPDPELDLDFVPEP 381 (408)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHTTCEEE-CTHHHHCBCGGGHHHHHHHHHHHHHHH-TEECCCTTTTSBCTTSCSBCCSSC
T ss_pred cCcccCHHHHHHHHHHhcCcCCCceEE-CchhhhccCHHHHHHHHHHHHHHHHhc-CCCCCCCCCCCCCCCCCcccCCCC
Confidence 8776 556677787665565432 134679999999988877766543111 322110
Q ss_pred --CCCceEEEEeeccchhhhheeeee
Q 047978 291 --EELEWGVLLGFEAGLTVEAIVLRS 314 (320)
Q Consensus 291 --~~~d~vll~~~G~G~~~~a~~l~~ 314 (320)
...++++.-+||-|.+-.+++++.
T Consensus 382 ~~~~~~~a~~~sfGfGG~na~~vl~~ 407 (408)
T 1j3n_A 382 REAKVDYALSNSFAFGGHNAVLAFKR 407 (408)
T ss_dssp EECCCSEEEEEEECTTSEEEEEEEEC
T ss_pred cCCCCCEEEEecccCCcceEEEEEec
Confidence 011678889999999888888874
No 55
>3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A
Probab=99.57 E-value=2.7e-14 Score=135.78 Aligned_cols=249 Identities=11% Similarity=0.051 Sum_probs=161.9
Q ss_pred chHHHHHHHHHHHHHHcCCCCCC-cC----EEEEEeeC--------------------------C-CCCCCHHHHHHHHc
Q 047978 55 KVPKLGKEAVSKAIKEWGQPISK-IT----HLISCSVS--------------------------G-VDMPGADYQLTKLL 102 (320)
Q Consensus 55 ~~~~la~~Aa~~aL~~ag~~~~d-Id----~li~~s~t--------------------------~-~~~p~~a~~l~~~L 102 (320)
....|+.+|+++||+++|+++++ || .++++++. + ...+..+.+|+..|
T Consensus 86 ~~~~l~l~aa~~AL~dAGl~~~~~id~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~l 165 (428)
T 3kzu_A 86 PFIVYAVGAADQALDDAGWHPENDEDQVRTGVLIGSGIGGIEGIVEAGYTLRDKGPRRISPFFIPGRLINLASGHVSIKH 165 (428)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCSHHHHHTEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTTTTTTCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCChhhhccccceEEEEcccCCcchhHHHHHHHHHhcCccccCchhcccchhhhHHHHHHHHc
Confidence 45789999999999999999999 87 56666642 2 33445688999999
Q ss_pred CCCcc------hhhhhhh--------hhcCCCCeEEEEEeeccccc----------ccCCC--------CCCchhhhhhh
Q 047978 103 GLKPS------VKRVMLT--------AESNAGARVLVVCSEITVGT----------FRAPS--------DENLSCLVNRA 150 (320)
Q Consensus 103 Gl~~~------~c~~~l~--------l~~~~~~~~LVv~~e~~s~~----------~~~~~--------~~~~~~~~~~~ 150 (320)
|++.. .|++.++ |++|..+.+||+++|..... ...+. -+..+....++
T Consensus 166 gl~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~~G~ 245 (428)
T 3kzu_A 166 KLRGPNHSVVTACATGTHAIGDAARLIAFGDADVMVAGGTESPVSRISLAGFAACKALSTERNDDPTAASRPYDEDRDGF 245 (428)
T ss_dssp TCCSCEECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCSCTTSGGGTCCTTBTTCCSB
T ss_pred CCCCceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeeecCcCCHHHHHHHHHccccccCccCCcccccCCcccCCCce
Confidence 99752 3776554 78899999999999982110 00000 00011223578
Q ss_pred hhccCceEEEEeecCCC---CCCCCeeEEeccCceecCCCcccccccccccceechhHHHHHHHHhhhcCCCCCCCCceE
Q 047978 151 IVGDGTAALIVGACPDI---NTERPLFHIVPTAQTILPDSEDAIKGHFRESPLIADNIDKFLAESFDQVSLNDHDWNSLF 227 (320)
Q Consensus 151 ~~GDgAaA~ll~~~~~~---~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~i~~~l~~~g~~~~d~~~~~ 227 (320)
++||||+|+||++.+.. + ..+...+...+... +..... ..... .....++++++|+++|++++|| ++
T Consensus 246 v~gdGAaavvL~~~~~A~~~g-~~i~a~i~g~~~~~--dg~~~~--~p~~~---~~~~~~ai~~al~~Agl~~~dI--d~ 315 (428)
T 3kzu_A 246 VMGEGAGIVVLEELEHALARG-AKIYAEVIGYGMSG--DAFHIT--APTES---GEGAQRCMVAALKRAGIVPDEI--DY 315 (428)
T ss_dssp CBBCEEEEEEEEEHHHHHHHT-CCCCEEEEEEEEEE--CCSCSS--SCCTT---CHHHHHHHHHHHHHHTCCGGGC--CE
T ss_pred eecCceEEEEEccHHHHHhCC-CceEEEEEEEEEcc--CCCCCC--CCCCC---HHHHHHHHHHHHHHcCCCHHHe--eE
Confidence 99999999999975431 1 11223333322111 000000 01111 2456688999999999999997 39
Q ss_pred EEEc----CCChhHHHHHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCC--------------
Q 047978 228 WMMH----PIGPAVLDQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATT-------------- 289 (320)
Q Consensus 228 ~i~h----~~~~~~~~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~-------------- 289 (320)
+.+| +.+...++.+.+.++.+.+++..+ .....+||+.+|+=.+.+...+..... +.+.|
T Consensus 316 ve~HgtgT~~d~~e~~al~~~~g~~~~~~~v~-s~k~~~GH~~gAsG~~~~i~~~~~l~~-~~ipp~~~~~~~~~~~~~~ 393 (428)
T 3kzu_A 316 INAHGTSTMADTIELGAVERVVGEAAAKISMS-STKSSIGHLLGAAGAAEAVFSTLAIRD-NIAPATLNLDNPAAQTRID 393 (428)
T ss_dssp EECCCCSSTTHHHHHHHHHHHHGGGGGGCEEE-CTHHHHCBCGGGHHHHHHHHHHHHHHH-TEECCBTTCSSBSSCCSSB
T ss_pred EEecCCcchhhHHHHHHHHHHhccCCCceeeC-CchhhhCCCchhhHHHHHHHHHHHhcc-CccCCCCCCCCCCCCCCcc
Confidence 9999 888778888888898877776542 245668999888777776665543211 32210
Q ss_pred ---C----CCCceEEEEeeccchhhhheeeeec
Q 047978 290 ---G----EELEWGVLLGFEAGLTVEAIVLRSI 315 (320)
Q Consensus 290 ---G----~~~d~vll~~~G~G~~~~a~~l~~~ 315 (320)
. ...++++.-+||.|.+-.+++++..
T Consensus 394 ~~~~~~~~~~~~~a~~~sfGfgG~na~~vl~~~ 426 (428)
T 3kzu_A 394 LVPHKPRERKIDVALSNSFGFGGTNASLVLRRY 426 (428)
T ss_dssp CCBSSCEECCCSEEEEEEEETTTEEEEEEEECC
T ss_pred cCCCCCcCCCCCEEEEeCcccChhhEEEEEeec
Confidence 0 0116788889999998888888753
No 56
>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ...
Probab=99.56 E-value=7.3e-14 Score=131.34 Aligned_cols=239 Identities=13% Similarity=0.086 Sum_probs=160.5
Q ss_pred ccchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCC-CCCCCHHHHHHHHcCCCcc--------hhhhhhh--------h
Q 047978 53 VPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSG-VDMPGADYQLTKLLGLKPS--------VKRVMLT--------A 115 (320)
Q Consensus 53 ~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~-~~~p~~a~~l~~~LGl~~~--------~c~~~l~--------l 115 (320)
+++..+|+.+|+++||+++|+++++||.++++++.+ ...+..+.+|+..||+++. .|++.+. +
T Consensus 24 ~~~~~~L~~~a~~~Al~dAgl~~~~id~~~~g~~~~~~~~~~~a~~ia~~lgl~~~~p~~~v~~aCaSgl~Al~~A~~~I 103 (392)
T 2vu1_A 24 NTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEGQNPARQAAMKAGVPQEATAWGMNQLCGSGLRAVALGMQQI 103 (392)
T ss_dssp TCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSEEEEEECGGGHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCcHHHHHHHHHcCCCCCceEEEecccchHHHHHHHHHHHHH
Confidence 678899999999999999999999999999998887 5568899999999999841 3765433 7
Q ss_pred hcCCCCeEEEEEeecccc-ccc---------------C------------------------------------------
Q 047978 116 ESNAGARVLVVCSEITVG-TFR---------------A------------------------------------------ 137 (320)
Q Consensus 116 ~~~~~~~~LVv~~e~~s~-~~~---------------~------------------------------------------ 137 (320)
++|..+.+|++++|..+. .+. +
T Consensus 104 ~~G~~d~vlvgG~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~s~e~~~~~a~~s~ 183 (392)
T 2vu1_A 104 ATGDASIIVAGGMESMSMAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDAFAVASQ 183 (392)
T ss_dssp HTTSCSCEEEEEEEESTTCCEEECCTTCCCSSCEEEEEHHHHHHTBCTTTCCBHHHHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred HCCCCCEEEEEEEeccCCCccccccccccccCcccccchhhhcccccccccchHHHHHHHHHHHhCCCHHHHHHHHHHHH
Confidence 889999999999997653 110 0
Q ss_pred -----------------C-----------CCCC--chh-----------h---hhhhh-------hccCceEEEEeecCC
Q 047978 138 -----------------P-----------SDEN--LSC-----------L---VNRAI-------VGDGTAALIVGACPD 166 (320)
Q Consensus 138 -----------------~-----------~~~~--~~~-----------~---~~~~~-------~GDgAaA~ll~~~~~ 166 (320)
| -|.+ ... . ...++ +||||+|+||++.+.
T Consensus 184 ~~A~~~~~ag~~~~ei~p~~~~~~~~~~~f~~d~~~r~~~t~e~~~~~~~v~~~~g~vt~~~~~~~~dGAaavvL~s~~~ 263 (392)
T 2vu1_A 184 NKAEAAQKDGRFKDEIVPFIVKGRKGDITVDADEYIRHGATLDSMAKLRPAFDKEGTVTAGNASGLNDGAAAALLMSEAE 263 (392)
T ss_dssp HHHHHHHHHTTTTTTBCCEEECCTTCCEEECSCSSCCTTCCHHHHHTCCCSSCTTCCCCSSSBCCCEEEEEEEEEEEHHH
T ss_pred HHHHHhHhcCCccceeeeeeeccCCCceeeccccccCCCCCHHHHhcCCCccCCCCCeeCcccCCccChhheeeEecHHH
Confidence 0 0000 000 0 11456 999999999987653
Q ss_pred C---CCCCCeeEEeccCceecCCCcccccccccccceechhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHHHHH
Q 047978 167 I---NTERPLFHIVPTAQTILPDSEDAIKGHFRESPLIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEG 243 (320)
Q Consensus 167 ~---~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~~ 243 (320)
. + ..+..++...+.... ... . .......+++.+|+++|++++||+ ++-+|.......-.+.+
T Consensus 264 A~~~g-~~~~a~i~g~~~~~~--~p~-------~---~~~~~~~a~~~al~~agl~~~dId--~ie~~d~f~~~~l~~~~ 328 (392)
T 2vu1_A 264 ASRRG-IQPLGRIVSWATVGV--DPK-------V---MGTGPIPASRKALERAGWKIGDLD--LVEANEAFAAQACAVNK 328 (392)
T ss_dssp HHHHT-CCCSEEEEEEEEEEC--CGG-------G---GGGTHHHHHHHHHHHHTCCGGGCS--EEEECCSBHHHHHHHHH
T ss_pred HHhcC-CCccEEEEEEEEeec--Chh-------h---cchhHHHHHHHHHHHcCCCHHHcC--EEEeccccHHHHHHHHH
Confidence 2 1 123345544332211 000 0 113345789999999999999973 88899888766666789
Q ss_pred HcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCCCCCCceEEEEeeccchhhhheeeee
Q 047978 244 KLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEAIVLRS 314 (320)
Q Consensus 244 ~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~~l~~ 314 (320)
.||++++++..+ .....+||+..|+=...+..++..... +.+ ++.|....+.|....+++++.
T Consensus 329 ~lg~~~~~vn~~-gg~~~~GHp~gAsG~~~~~~~~~~L~~----~~~---~~gl~~~~~ggG~~~a~~~e~ 391 (392)
T 2vu1_A 329 DLGWDPSIVNVN-GGAIAIGHPIGASGARILNTLLFEMKR----RGA---RKGLATLCIGGGMGVAMCIES 391 (392)
T ss_dssp HHCCCGGGBSTT-CCHHHHCCCGGGHHHHHHHHHHHHHHH----HTC---SEEEEEEEETTTEEEEEEEEC
T ss_pred HcCCCcccCCCC-ccHhhhCCChhhHHHHHHHHHHHHHhc----cCC---CEEEEEEecccchheEEEEEe
Confidence 999988776432 134568999998877777777665221 123 455543323344555677764
No 57
>1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A
Probab=99.55 E-value=1.2e-13 Score=130.06 Aligned_cols=239 Identities=16% Similarity=0.064 Sum_probs=159.4
Q ss_pred ccchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCC-CCCCCHHHHHHHHcCCCc---c-----hhhhhhh--------h
Q 047978 53 VPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSG-VDMPGADYQLTKLLGLKP---S-----VKRVMLT--------A 115 (320)
Q Consensus 53 ~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~-~~~p~~a~~l~~~LGl~~---~-----~c~~~l~--------l 115 (320)
+++..+|+.+|+++||+++|+++++||.++++++++ +..|..+.+|+..||++. . .|++.+. +
T Consensus 27 ~~~~~~L~~~a~~~Al~dAGl~~~~id~v~~g~~~~~~~~~~~a~~ia~~lgl~~~~p~~~v~~aCaSg~~Ai~~A~~~I 106 (397)
T 1wl4_A 27 AVPVQDLGSTVIKEVLKRATVAPEDVSEVIFGHVLAAGCGQNPVRQASVGAGIPYSVPAWSCQMICGSGLKAVCLAVQSI 106 (397)
T ss_dssp TSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSCEEEECCGGGHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCCHHHHHHHHHcCCCCCccEEEecCcChhHHHHHHHHHHHH
Confidence 567899999999999999999999999999998887 667889999999999942 1 3766543 7
Q ss_pred hcCCCCeEEEEEeeccccc-ccC------------------------C--------------------------------
Q 047978 116 ESNAGARVLVVCSEITVGT-FRA------------------------P-------------------------------- 138 (320)
Q Consensus 116 ~~~~~~~~LVv~~e~~s~~-~~~------------------------~-------------------------------- 138 (320)
++|..+.+|++++|..+.. +.. |
T Consensus 107 ~~G~~d~vlagG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~a~~~~~~~g~tre~~~~~a~~s~ 186 (397)
T 1wl4_A 107 GIGDSSIVVAGGMENMSKAPHLAYLRTGVKIGEMPLTDSILCDGLTDAFHNCHMGITAENVAKKWQVSREDQDKVAVLSQ 186 (397)
T ss_dssp HTTSCSEEEEEEEEESTTCCEECCCSSCCSSSCCCCEEHHHHHTTBCTTTCCBHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HCCCCCEEEEEEEeecCCCccccccccccccCcccccchhccccccCccccchHHHHHHHHHHHhCcCHHHHHHHHHHHH
Confidence 8899999999999987631 100 0
Q ss_pred -------------------------------CCCCc------h----hh--hh----hhh-------hccCceEEEEeec
Q 047978 139 -------------------------------SDENL------S----CL--VN----RAI-------VGDGTAALIVGAC 164 (320)
Q Consensus 139 -------------------------------~~~~~------~----~~--~~----~~~-------~GDgAaA~ll~~~ 164 (320)
.|... + .+ +. +++ +||||+|+||++.
T Consensus 187 ~~A~~a~~~g~~~~ei~pv~~~~~~~~~~~~~d~~~r~~~t~e~~~~~rpvfd~~~~G~vt~~~~s~~~dGAaavvL~s~ 266 (397)
T 1wl4_A 187 NRTENAQKAGHFDKEIVPVLVSTRKGLIEVKTDEFPRHGSNIEAMSKLKPYFLTDGTGTVTPANASGINDGAAAVVLMKK 266 (397)
T ss_dssp HHHHHHHHTTTTTTTBCCEEEEETTEEEEECSCSCCCTTCCHHHHHTSCCSSCCSSCCCCCTTSBCCCEEEEEEEEEEEH
T ss_pred HHHHhhHhcCCcccceeeeeeccCCCceeeccccccCCCCCHHHHhcCCCccCCCCCCCEechhcCCccchhheeeEecH
Confidence 01000 0 00 10 235 8999999999876
Q ss_pred CCC--CCCCCeeEEeccCcee-cCCCcccccccccccceechhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHHH
Q 047978 165 PDI--NTERPLFHIVPTAQTI-LPDSEDAIKGHFRESPLIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQI 241 (320)
Q Consensus 165 ~~~--~~~~~~~~~~~~~~~~-~p~~~~~~~~~~~~~g~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~ 241 (320)
+.. .-..+..++...+... .|. .. ......+++.+|+++|++++|| +++-+|.........+
T Consensus 267 ~~A~~~g~~~~a~i~g~~~~~~~p~----------~~---~~~~~~a~~~al~~Agl~~~dI--d~ie~~d~f~~~~l~~ 331 (397)
T 1wl4_A 267 SEADKRGLTPLARIVSWSQVGVEPS----------IM---GIGPIPAIKQAVTKAGWSLEDV--DIFEINEAFAAVSAAI 331 (397)
T ss_dssp HHHHHTTCCCSEEEEEEEEEECCGG----------GG---GGTHHHHHHHHHHHHTCCGGGC--CEEEECCSBHHHHHHH
T ss_pred HHHHHcCCCccEEEEEEEEeecChh----------hc---cchHHHHHHHHHHHcCCCHHHC--CEEEEecccHHHHHHH
Confidence 532 0012334554433221 111 01 1334578999999999999997 3888999887766778
Q ss_pred HHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCCCCCCceEEEEeeccchhhhheeeee
Q 047978 242 EGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEAIVLRS 314 (320)
Q Consensus 242 ~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~~l~~ 314 (320)
.+.||++++++..+ .....+||+..|+=...+..++..... +.+ ++.|....+.|....+++++.
T Consensus 332 ~~~lg~~~~~vn~~-gg~~~~GHp~gAsG~~~~~~~~~~L~~----~~~---~~gl~~~~~ggG~~~a~~~e~ 396 (397)
T 1wl4_A 332 VKELGLNPEKVNIE-GGAIALGHPLGASGCRILVTLLHTLER----MGR---SRGVAALCIGGGMGIAMCVQR 396 (397)
T ss_dssp HHHHTCCGGGBSTT-CCHHHHCCCHHHHHHHHHHHHHHHHHH----HTC---CEEEEEEEETTTEEEEEEEEE
T ss_pred HHHcCCCCcCcCCC-cCccccCCChhhhHHHHHHHHHHHHhh----cCC---CEEEEEEecccchheEEEEEe
Confidence 89999987776432 135558999988765555555554221 123 555655444444555777764
No 58
>4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A*
Probab=99.54 E-value=1.4e-13 Score=131.77 Aligned_cols=298 Identities=12% Similarity=0.056 Sum_probs=177.7
Q ss_pred cccceEEccccccCCCcccccccHHHHHhhhcCC-----ch------------hH--------H------HHHHHHHhhh
Q 047978 3 LLGKFQETQRPQANPANCVYQTDYPDFYFRITSS-----NH------------MT--------E------LKEKFKRMYI 51 (320)
Q Consensus 3 ~~~~~~I~a~~~~lP~~~i~~~e~~~~~~~~~~~-----~~------------~~--------g------i~~~~r~~~~ 51 (320)
+.++|.|+++|...|.- .+.+++-+.+..+.+. .| +. . |.. +.+.
T Consensus 22 m~~~v~ItG~g~~~P~g-~~~~~~w~~l~~g~s~i~~~~~~~~~~~~~~~~g~v~~~~~~~~~~fd~~~~i~~---~~~~ 97 (451)
T 4ddo_A 22 MTLRVVVTGIGIVSPLG-CGKELVWQRLIGGGSGLRRLGDDIAGELSAKVGGTVQDVAEDPEGGFDPERSVPH---KELR 97 (451)
T ss_dssp --CCEEEEEEEEEETTE-ESHHHHHHHHHTTCCCEEECCHHHHTTSSCCEEECCCCTTTCTTTCCCGGGTSCH---HHHT
T ss_pred CCCCEEEEEeEEECCCC-CCHHHHHHHHHcCCCeeeeCCccccccccCccceEccccccccccccchhhhCCH---HHHh
Confidence 45789999999999976 3555555544211100 00 00 0 111 1111
Q ss_pred cccchHHHHHHHHHHHHHHcCCCCCCc-C----EEEEEeeCC---------------------------CCCCCHHHHHH
Q 047978 52 LVPKVPKLGKEAVSKAIKEWGQPISKI-T----HLISCSVSG---------------------------VDMPGADYQLT 99 (320)
Q Consensus 52 ~~e~~~~la~~Aa~~aL~~ag~~~~dI-d----~li~~s~t~---------------------------~~~p~~a~~l~ 99 (320)
.-.....|+.+|+++||+++|+++++| | .+++++... +..+..+.+|+
T Consensus 98 ~~d~~~~L~l~Aa~~AL~dAGl~~~~i~d~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia 177 (451)
T 4ddo_A 98 KMDRFIQMAMVAADEALAEAGWAPEAEQQRERTATVVASGIGGFPGLAEAVRIGETRGVRRLSPFTIPFFLSNLAAGQIS 177 (451)
T ss_dssp TSCHHHHHHHHHHHHHHHHHTCCCCSHHHHTTEEEEEECSSCSHHHHHHHHHHHHHTCGGGCCTTHHHHHCTTHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHHHHcCCChhhcccccceEEEEeecCCchHHHHHHHHHHHhcCccccCcchhhccccchHHHHHH
Confidence 223467899999999999999999999 7 677776521 23445688999
Q ss_pred HHcCCCcc------hhhhhhh--------hhcCCCCeEEEEEeecccccc----------cCCC--------CCCchhhh
Q 047978 100 KLLGLKPS------VKRVMLT--------AESNAGARVLVVCSEITVGTF----------RAPS--------DENLSCLV 147 (320)
Q Consensus 100 ~~LGl~~~------~c~~~l~--------l~~~~~~~~LVv~~e~~s~~~----------~~~~--------~~~~~~~~ 147 (320)
..||++.. .|++.++ |++|.++.+||+++|..+... ..+. .+..+...
T Consensus 178 ~~lgl~Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~vLvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~ 257 (451)
T 4ddo_A 178 IKHRFRGPLGCPVTACAASVQAIGDAMRMIRTGEADVVLAGGAEAAFDKVSLGGFAAARALSTGFSEEPVRASRPFDRDR 257 (451)
T ss_dssp HHHTCCSCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCSCTTSGGGSCCTTBTTC
T ss_pred HHhcCCCceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeccccccCHHHHHHHHHHhhhccCCCcCccccccccccCC
Confidence 99999752 4776554 788999999999999864210 0000 00001123
Q ss_pred hhhhhccCceEEEEeecCCC--CCCCCeeEEeccCceecCCCcccccccccccceechhHHHHHHHHhhhcCCCCCCCCc
Q 047978 148 NRAIVGDGTAALIVGACPDI--NTERPLFHIVPTAQTILPDSEDAIKGHFRESPLIADNIDKFLAESFDQVSLNDHDWNS 225 (320)
Q Consensus 148 ~~~~~GDgAaA~ll~~~~~~--~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~i~~~l~~~g~~~~d~~~ 225 (320)
.++++||||+|+||++.+.. .-..+...+...+....+.. +. ....+ .....++++++|+++|++++||
T Consensus 258 ~g~v~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~---~~-~~~~~---~~~~~~ai~~al~~Agl~~~dI-- 328 (451)
T 4ddo_A 258 DGFVMGEGAAMVVVESLDHALARGARPIAEIIGYGTTADAYH---MT-AGPDD---GSGAMRAMKLALRMGDVAPEQV-- 328 (451)
T ss_dssp CSBCBBCEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCSC---SS-CCCTT---CHHHHHHHHHHHHHHTCCGGGC--
T ss_pred CCcEEeceEEEEEEeeHHHHHhCCCceEEEEEEEEEecCCCc---cC-CCCCC---HHHHHHHHHHHHHHcCCCHHHc--
Confidence 47889999999999975421 00112234433222211110 00 01111 2456788999999999999997
Q ss_pred eEEEEcCCChhHHHHH-----HHHcCCCcchhh-hhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCC----------
Q 047978 226 LFWMMHPIGPAVLDQI-----EGKLGLEKTKLR-ETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATT---------- 289 (320)
Q Consensus 226 ~~~i~h~~~~~~~~~~-----~~~lg~~~e~~~-~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~---------- 289 (320)
+++.+|-.+..+.+.+ .+.++.. .++. .+ .-..+||+.+|+=.+.|..++..... +.+.|
T Consensus 329 d~ve~Hgtgt~~~d~~E~~al~~~~~~~-~~~~v~s--~k~~~GH~~gAaG~~~~i~~~~~l~~-~~ipp~~~~~~~~~~ 404 (451)
T 4ddo_A 329 DYVNAHATSTPVGDAGEIEALKTVFGVG-AGPAISS--TKSATGHLLGAAGAIEAAFSILALRD-GVLPGTLNLEHPDPA 404 (451)
T ss_dssp CEEECCCCSCHHHHHHHHHHHHHHHCSS-SSCEEEC--THHHHCBCGGGHHHHHHHHHHHHHHH-TEECCCTTCSSBCGG
T ss_pred CEEEecCCcCcccCHHHHHHHHHHhCCC-CCCcccC--chhhhccCHHHHHHHHHHHHHHHHhc-CCcCCCCCCCCCCcc
Confidence 3999998776654433 3445431 1121 12 24457999988866665555432111 32110
Q ss_pred --------C----CCCceEEEEeeccchhhhheeeeeccC
Q 047978 290 --------G----EELEWGVLLGFEAGLTVEAIVLRSIPM 317 (320)
Q Consensus 290 --------G----~~~d~vll~~~G~G~~~~a~~l~~~~~ 317 (320)
. ...++++.-+||-|.+-.+++|+..|.
T Consensus 405 ~~~~~~~~~~~~~~~~~~a~~~sfgfgG~na~~vl~~~~~ 444 (451)
T 4ddo_A 405 ADGLDLIGPAARHVPVEIALSNGFGFGGVNASVLFRRYPS 444 (451)
T ss_dssp GTTSEECCSSCEECCCSEEEEEEEETTTEEEEEEEEESCC
T ss_pred cccccccCCCCCCCCcCEEEEeeEcCCCceEEEEEeeCCC
Confidence 0 011567888999999999999987754
No 59
>1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1
Probab=99.53 E-value=2.8e-13 Score=127.77 Aligned_cols=242 Identities=13% Similarity=0.071 Sum_probs=157.9
Q ss_pred hcccchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCC-CC-CCCHHHHHHHHcCCCc-c-------hhhhhhh------
Q 047978 51 ILVPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSG-VD-MPGADYQLTKLLGLKP-S-------VKRVMLT------ 114 (320)
Q Consensus 51 ~~~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~-~~-~p~~a~~l~~~LGl~~-~-------~c~~~l~------ 114 (320)
..++++.+|+.+|+++||+++|+++++||.|+++++++ +. .|..+.+|+.+||++. . .|+++++
T Consensus 21 ~~~~~~~~L~~~Aa~~Al~dAgl~~~~id~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~p~~~v~~aCas~~~Al~~A~ 100 (401)
T 1ulq_A 21 LASVRPDDLLAHALSVLVDRSGVPKEEVEDVYAGCANQAGEDNRNVARMALLLAGFPVEVAGCTVNRLCGSGLEAVAQAA 100 (401)
T ss_dssp TTTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSSTTTTTHHHHHHHHTTCCTTCEEEEEECGGGHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCChHHHHHHHHhCCCCCccEeeccccchHHHHHHHHHH
Confidence 35788999999999999999999999999999998888 54 6889999999999953 1 3776554
Q ss_pred --hhcCCCCeEEEEEeecccc-ccc----------------CC-------C----C----C-------------------
Q 047978 115 --AESNAGARVLVVCSEITVG-TFR----------------AP-------S----D----E------------------- 141 (320)
Q Consensus 115 --l~~~~~~~~LVv~~e~~s~-~~~----------------~~-------~----~----~------------------- 141 (320)
+++|..+.+||+++|..+. .+. +. . + .
T Consensus 101 ~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~a~~~~~~~g~sre~ 180 (401)
T 1ulq_A 101 RAIWAGEGKVYIGSGVESMSRAPYAVPKPERGFPTGNLVMYDTTLGWRFVNPKMQALYGTESMGETAENLAEMYGIRREE 180 (401)
T ss_dssp HHHHTTSCSEEEEEEEEESSSCCEEECCCCSSSCCSCEEEEETTSSCCSCCHHHHHHSCCCCHHHHHHHHHHHHTCCHHH
T ss_pred HHHHCCCCCEEEEEEEeecCCCcccccccccccccCcccccchhhhccccccccccccccchHHHHHHHHHHHhCCCHHH
Confidence 7889999999999998753 110 00 0 0 0
Q ss_pred -------------------Cc------------------------------h----hh--h--hhhh-------hccCce
Q 047978 142 -------------------NL------------------------------S----CL--V--NRAI-------VGDGTA 157 (320)
Q Consensus 142 -------------------~~------------------------------~----~~--~--~~~~-------~GDgAa 157 (320)
.. + .+ + .+.+ ++|||+
T Consensus 181 ~~~~a~~s~~~A~~~~~ag~~~~ei~P~~~~~~~~~~~~~~d~~~r~~~t~e~~~~~rpif~~~G~vt~~~~~~~~dGAa 260 (401)
T 1ulq_A 181 QDRFALLSHQKAVRAWEEGRFQDEVVPVPVKRGKEEILVEQDEGPRRDTSLEKLAALRPVFREGGTVTAGNSSPLNDGAA 260 (401)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEETTEEEEECSCSCCCTTCCHHHHHHSCBSSSTTCSCBGGGBCCCEEEEE
T ss_pred HHHHHHHHHHHHHhhhhcCCcccceeceeecCCCCceeeccccccCCCCCHHHHhhCCCccCCCCCeechhcCCccchhe
Confidence 00 0 00 0 0112 599999
Q ss_pred EEEEeecCCC--CCCCCeeEEeccCceecCCCcccccccccccceechhHHHHHHHHhhhcCCCCCCCCceEEEEcCCCh
Q 047978 158 ALIVGACPDI--NTERPLFHIVPTAQTILPDSEDAIKGHFRESPLIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGP 235 (320)
Q Consensus 158 A~ll~~~~~~--~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~ 235 (320)
|+||++.+.. .-.++..++...+.... ... .. ......+++.+|+++|++++||+ ++=.|-...
T Consensus 261 avvL~s~~~A~~~g~~~~a~i~g~~~~~~--~p~-----~~-----~~~~~~a~~~al~~Agl~~~dId--~ie~heafa 326 (401)
T 1ulq_A 261 AVLLVSDDYAKAHGLRPLARVRAIAVAGV--PPR-----IM-----GIGPVPATRKALERAGLSFSDLG--LIELNEAFA 326 (401)
T ss_dssp EEEEEEHHHHHHTTCCCSEEEEEEEEEEC--CGG-----GG-----GGTHHHHHHHHHHHTTCCGGGCS--EEEECCSBH
T ss_pred EEEEecHHHHHHcCCCceEEEEEEEEecC--Ccc-----cc-----chhHHHHHHHHHHHcCCCHHHcC--EEEEecchH
Confidence 9999876532 00123345544332211 000 00 12335788999999999999973 889998776
Q ss_pred hHHHHHHHHcCC--CcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCCCCCCceEEEEeeccchhhhheeee
Q 047978 236 AVLDQIEGKLGL--EKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEAIVLR 313 (320)
Q Consensus 236 ~~~~~~~~~lg~--~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~~l~ 313 (320)
...-...+.||+ +.+++-.+ --..-+||...|+=...+..++.+... +.+ ++.|..++|.|....+++++
T Consensus 327 ~~~l~~~~~lg~~~~~~~vn~~-Gg~~a~GHp~gAsG~~~~~~~~~~L~~----~~~---~~gl~~~~~ggG~~~a~v~~ 398 (401)
T 1ulq_A 327 AQALAVLREWSLSMEDQRLNPN-GGAIALGHPLGASGARILTTLVHEMRR----RKV---QFGLATMCIGVGQGIAVVVE 398 (401)
T ss_dssp HHHHHHHHHHTCCTTCTTBSTT-CCHHHHCCCHHHHHHHHHHHHHHHHHH----TTC---SEEEEEEEETTTEEEEEEEE
T ss_pred HHHHHHHHHcCCCCCCCccCCC-CcccccCCCcchHHHHHHHHHHHHHhh----cCC---CEEEEEeecCCcccEEEEEE
Confidence 443344577898 54444321 013348999877666666666554221 123 67777777766667788887
Q ss_pred e
Q 047978 314 S 314 (320)
Q Consensus 314 ~ 314 (320)
.
T Consensus 399 ~ 399 (401)
T 1ulq_A 399 G 399 (401)
T ss_dssp E
T ss_pred e
Confidence 5
No 60
>2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A*
Probab=99.50 E-value=4e-13 Score=126.45 Aligned_cols=237 Identities=16% Similarity=0.138 Sum_probs=159.5
Q ss_pred cccchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCC-CCCCCHHHHHHHHcCCCc-c-------hhhhhhh--------
Q 047978 52 LVPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSG-VDMPGADYQLTKLLGLKP-S-------VKRVMLT-------- 114 (320)
Q Consensus 52 ~~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~-~~~p~~a~~l~~~LGl~~-~-------~c~~~l~-------- 114 (320)
.+++..+|+.+|++++|+++|+++++||.+++++..+ +..|..+.+++..||++. . .|++.++
T Consensus 28 ~~~~~~~l~~~a~~~Al~dAgl~~~~id~~~~g~~~~~~~~~~~a~~va~~lgl~~~~p~~~v~~aCaS~~~Al~~A~~~ 107 (395)
T 2ib8_A 28 SLLPATKLGSIAIQGAIEKAGIPKEEVKEAYMGNVLQGGEGQAPTRQAVLGAGLPISTPCTTINKVCASGMKAIMMASQS 107 (395)
T ss_dssp TTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTCCEEEEECGGGHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCchHHHHHHHHcCCCCCceEEEecccccHHHHHHHHHHHH
Confidence 3678899999999999999999999999999988887 667888999999999942 1 3776543
Q ss_pred hhcCCCCeEEEEEeeccccc-cc--------------------C---CC----------------CCCchh---------
Q 047978 115 AESNAGARVLVVCSEITVGT-FR--------------------A---PS----------------DENLSC--------- 145 (320)
Q Consensus 115 l~~~~~~~~LVv~~e~~s~~-~~--------------------~---~~----------------~~~~~~--------- 145 (320)
+++|..+.+||+++|..+.. +. . +. .-++++
T Consensus 108 I~~G~~d~vlvgG~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~a~~~~~~~g~sre~~~~~A~~s~ 187 (395)
T 2ib8_A 108 LMCGHQDVMVAGGMESMSNVPYVMNRGSTPYGGVKLEDLIVKDGLTDVYNKIHMGSCAENTAKKLNIARNEQDAYAINSY 187 (395)
T ss_dssp HHTTSCSEEEEEEEEEGGGCCEEECSSBCCTTCEEEEEHHHHHTTEETTTTEEHHHHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred HHCCCCCEEEEEeeecccCCcccccccccccccccccccccccccccccccchHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 78899999999999976531 10 0 00 000000
Q ss_pred -----------------------------------------------------hhhhhh-------hccCceEEEEeecC
Q 047978 146 -----------------------------------------------------LVNRAI-------VGDGTAALIVGACP 165 (320)
Q Consensus 146 -----------------------------------------------------~~~~~~-------~GDgAaA~ll~~~~ 165 (320)
....++ .||||+|+||++.+
T Consensus 188 ~~a~~a~~~~~f~~ei~p~~~~~~~~p~~~~~~D~~~r~~~~~~l~~l~~~f~~~~g~vt~~~~~~~~dGAaavvL~s~~ 267 (395)
T 2ib8_A 188 TRSKAAWEAGKFGNEVIPVTVTVKGQPDVVVKEDEEYKRVDFSKVPKLKTVFQKENGTVTAANASTLNDGAAALVLMTAD 267 (395)
T ss_dssp HHHHHHHHTTTTTTTBCCEEECCTTSCCEEECSCSGGGSCCTTTGGGSCCTTCSSSCCCCTTTBCCCEEEEEEEEEEEHH
T ss_pred HHHHhcccccCcccceeeeeecccCCcceeeccccccccCCHHHHhcCCccccCCCCCcccccCCccccceeEEEEecHH
Confidence 002345 89999999998765
Q ss_pred CC--CCCCCeeEEeccCcee-cCCCcccccccccccceechhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHHHH
Q 047978 166 DI--NTERPLFHIVPTAQTI-LPDSEDAIKGHFRESPLIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIE 242 (320)
Q Consensus 166 ~~--~~~~~~~~~~~~~~~~-~p~~~~~~~~~~~~~g~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~ 242 (320)
.. .-..+..++.+.+... -|. .. ......+++.+|+++|++++|| +++-+|.......-...
T Consensus 268 ~A~~~g~~~~a~I~g~~~~~~~p~----------~~---~~~~~~a~~~al~~Agl~~~dI--d~ie~~D~f~~~~l~~~ 332 (395)
T 2ib8_A 268 AAKRLNVTPLARIVAFADAAVEPI----------DF---PIAPVYAASMVLKDVGLKKEDI--AMWEVNEAFSLVVLANI 332 (395)
T ss_dssp HHHHTTCCCCEEEEEEEEEECCGG----------GG---GGHHHHHHHHHHHHHTCCGGGE--EEEEECCSBHHHHHHHH
T ss_pred HHHhcCCCccEEEEEEEEeccChh----------hc---cccHHHHHHHHHHHcCCCHHHc--CEEEEccccHHHHHHHH
Confidence 32 0012234454433221 110 01 1334578899999999999996 38888988766555556
Q ss_pred HHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCCCCCCceEEE-Eeeccchhhhheeeee
Q 047978 243 GKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVL-LGFEAGLTVEAIVLRS 314 (320)
Q Consensus 243 ~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll-~~~G~G~~~~a~~l~~ 314 (320)
+.||++++++..+ .....+||+..|+=...+..++.. ++.| ++.+. +..|.| ...+++++.
T Consensus 333 e~lg~~~~~vn~~-gg~~~~GHp~gAsG~~~~~~~~~~------L~~~---~~gl~~~~~ggG-~g~a~~~~~ 394 (395)
T 2ib8_A 333 KMLEIDPQKVNIN-GGAVSLGHPIGMSGARIVGHLTHA------LKQG---EYGLASICNGGG-GASAMLIQK 394 (395)
T ss_dssp HHHTCCGGGBSTT-CCHHHHCCCHHHHHHHHHHHHHHH------SCTT---CEEEEEEEETTT-EEEEEEEEE
T ss_pred HHcCCCccccCCC-cchhhcCCChhHHHHHHHHHHHHH------HhhC---CceEEEEecccC-HhheEEEEc
Confidence 7799987766432 124558999999988888888876 4445 55554 334444 334666653
No 61
>2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A
Probab=99.49 E-value=2.7e-13 Score=129.28 Aligned_cols=248 Identities=12% Similarity=0.034 Sum_probs=156.3
Q ss_pred chHHHHHHHHHHHHHHcCCCC-CCcC----EEEEEeeCC-C-------------------------CCC-CHHHHHHHHc
Q 047978 55 KVPKLGKEAVSKAIKEWGQPI-SKIT----HLISCSVSG-V-------------------------DMP-GADYQLTKLL 102 (320)
Q Consensus 55 ~~~~la~~Aa~~aL~~ag~~~-~dId----~li~~s~t~-~-------------------------~~p-~~a~~l~~~L 102 (320)
...+|+.+|+++||+++|+++ ++|| .|+++++++ + ..| ..+.+|+..|
T Consensus 96 ~~~~l~l~aa~~AL~dAGl~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~l 175 (438)
T 2iwz_A 96 SPTIMAIGAAELAMKDSGWHPQSEADQVATGVAIGMGMIPLEVVSETALNFQTKGYNKVSPFFVPKILVNMAAGQVSIRY 175 (438)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCSHHHHHTEEEEEEESCCCHHHHHHHHHHHHHHCGGGSCTTHHHHTCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCCcccccCcceEEEEecccCcHHHHHHHHHHHHhcCCcccChhhhhhhhhhHHHHHHHHHh
Confidence 457899999999999999998 8887 577777654 2 123 4789999999
Q ss_pred CCCcc------hhhhhhh--------hhcCCCCeEEEEEeecc-ccc----------c---cCCCCC--Cchhhhhhhhh
Q 047978 103 GLKPS------VKRVMLT--------AESNAGARVLVVCSEIT-VGT----------F---RAPSDE--NLSCLVNRAIV 152 (320)
Q Consensus 103 Gl~~~------~c~~~l~--------l~~~~~~~~LVv~~e~~-s~~----------~---~~~~~~--~~~~~~~~~~~ 152 (320)
|++.. .|++.++ |++|..+.+||+++|.. ++. + .+|+.. ..+....++++
T Consensus 176 gl~gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~~~ls~~~~p~~~~~pfd~~~~G~~~ 255 (438)
T 2iwz_A 176 KLKGPNHAVSTACTTGAHAVGDSFRFIAHGDADVMVAGGTDSCISPLSLAGFSRARALSTNSDPKLACRPFHPKRDGFVM 255 (438)
T ss_dssp TCCSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCSCTTTSCCTTCTTCCSBCB
T ss_pred CCCCceeeecCchhHHHHHHHHHHHHHHcCCCCEEEEEeeehhcCHHHHHHHHhcCCcCCCCCCCcccccCCCCCCCEEe
Confidence 99753 3776544 78899999999999963 320 0 001100 00112347899
Q ss_pred ccCceEEEEeecCCC---CCCCCeeEEeccCceecCCCcccccccccccceechhHHHHHHHHhhhcCCCCCCCCceEEE
Q 047978 153 GDGTAALIVGACPDI---NTERPLFHIVPTAQTILPDSEDAIKGHFRESPLIADNIDKFLAESFDQVSLNDHDWNSLFWM 229 (320)
Q Consensus 153 GDgAaA~ll~~~~~~---~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i 229 (320)
||||+|+||++.+.. + .....++...+....... +. ....+ .....++++++|+++|++++|| +++.
T Consensus 256 geGAaavvL~~~~~A~~~g-~~i~a~I~g~~~~~d~~~---~t-~p~~~---~~~~~~ai~~Al~~Agl~p~dI--d~ve 325 (438)
T 2iwz_A 256 GEGAAVLVLEEYEHAVQRR-ARIYAEVLGYGLSGDAGH---IT-APDPE---GEGALRCMAAALKDAGVQPEEI--SYIN 325 (438)
T ss_dssp BCEEEEEEEEEHHHHHHTT-CCCCEEEEEEEEEECCSC---SS-SCCTT---CHHHHHHHHHHHHHHTCCGGGC--CEEE
T ss_pred eceEEEEEeccHHHHHhCC-CceEEEEecceecCCCCC---CC-CCCCC---HHHHHHHHHHHHHHcCCCHHHc--CEEE
Confidence 999999999875431 1 111233333221111100 00 00111 2557789999999999999997 3999
Q ss_pred EcCCChhHHH-----HHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCC----------------
Q 047978 230 MHPIGPAVLD-----QIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKAT---------------- 288 (320)
Q Consensus 230 ~h~~~~~~~~-----~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~---------------- 288 (320)
+|+.+..+-| .+.+.++.+.+++..+ .+-..+||+.+|+-.+.|..++..... +.+.
T Consensus 326 ~HgtgT~~gD~~E~~al~~~fg~~~~~~~v~-s~K~~~GH~~gAaG~~~li~~~l~l~~-~~ipp~~~~~~~~p~~~~~~ 403 (438)
T 2iwz_A 326 AHATSTPLGDAAENKAIKHLFKDHAYALAVS-STKGATGHLLGAAGAVEAAFTTLACYY-QKLPPTLNLDCSEPEFDLNY 403 (438)
T ss_dssp CCCCSCHHHHHHHHHHHHHHHGGGGGTSEEE-CCHHHHCBCGGGHHHHHHHHHHHHHHH-TEECCBTTCSCCCTTCCSBC
T ss_pred ecCCCCcccCHHHHHHHHHHHhccCCCccee-cchhhhcCCHHHHHHHHHHHHHHHHhc-CccCCCCCCCCCCCCCCccc
Confidence 9999877643 3445565444444331 134557999999888777665543211 3321
Q ss_pred --------CCCCCceEEEEeeccchhhhheeeee
Q 047978 289 --------TGEELEWGVLLGFEAGLTVEAIVLRS 314 (320)
Q Consensus 289 --------~G~~~d~vll~~~G~G~~~~a~~l~~ 314 (320)
+..+.++++.-+||.|.+-..++|+.
T Consensus 404 v~~~~~~~~~~~~~~a~~~sfGfGG~na~~vl~~ 437 (438)
T 2iwz_A 404 VPLKAQEWKTEKRFIGLTNSFGFGGTNATLCIAG 437 (438)
T ss_dssp CBSSCEECCCSSSCEEEEEEEETTTEEEEEEEEC
T ss_pred cCCCcccCCCCCccEEEEecCcCCCeeEEEEEee
Confidence 10012567778999998888888764
No 62
>4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum}
Probab=99.49 E-value=6.2e-13 Score=125.79 Aligned_cols=291 Identities=11% Similarity=0.025 Sum_probs=176.2
Q ss_pred ccceEEccccccCCCcccccccHHHHHhhhcC-----Cchh-H-H-----------------HHHHHHHhhhcccchHHH
Q 047978 4 LGKFQETQRPQANPANCVYQTDYPDFYFRITS-----SNHM-T-E-----------------LKEKFKRMYILVPKVPKL 59 (320)
Q Consensus 4 ~~~~~I~a~~~~lP~~~i~~~e~~~~~~~~~~-----~~~~-~-g-----------------i~~~~r~~~~~~e~~~~l 59 (320)
+++|.|+++|...|.- .+.+++-+.+..+.+ ..|. . + |.. +-+..-.....|
T Consensus 5 m~~v~ItG~g~~~p~g-~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~~v~~fd~~~~i~~---~~~~~~d~~~~l 80 (412)
T 4ewg_A 5 MKRVVITGMGGVTALG-SRWDEIEAALKAGRNAVRRMPDWDYFESLHTRLAAPLPGFAQPADWPR---KKTRSMGRVSMY 80 (412)
T ss_dssp CCCEEEEEEEEEBTTB-SSHHHHHHHHHHTCCCCEECGGGGGSSSCCCCEEBCCSCCCCCTTSCH---HHHTTCCHHHHH
T ss_pred CCEEEEEeeEEECCCc-CCHHHHHHHHHcCCCceeeCCccccccCCccceeeecCCCChhhhCCH---HHHhhCCHHHHH
Confidence 5789999999999986 456666555421111 0000 0 0 111 111112345789
Q ss_pred HHHHHHHHHHHcCC-CCCCcC----EEEEEeeCC---------------------------CCCCCHHHHHHHHcCCCcc
Q 047978 60 GKEAVSKAIKEWGQ-PISKIT----HLISCSVSG---------------------------VDMPGADYQLTKLLGLKPS 107 (320)
Q Consensus 60 a~~Aa~~aL~~ag~-~~~dId----~li~~s~t~---------------------------~~~p~~a~~l~~~LGl~~~ 107 (320)
+.+|+++||+++|+ ++++|| .+++++++. ...+..+.+|+..||++..
T Consensus 81 ~l~aa~~Al~dAGl~~~~~i~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~gp 160 (412)
T 4ewg_A 81 AVRASELALADAGFAGDESISDGRMGVAYGSSSGSVEPIRAFGTMLESGSMTDVTSNSYVQMMPHTTAVNVSLFWDLKGR 160 (412)
T ss_dssp HHHHHHHHHHHHTCTTCGGGGTTTEEEEEECSCCCHHHHHHHHHHHHHCCCTTCCTTHHHHHSTTHHHHHHHHHTTCCSC
T ss_pred HHHHHHHHHHhcCCCCccccCccceEEEEeccCCchHHHHHHHHHHHhcCcccCChhhhhhhcccHHHHHHHHHhCCCCC
Confidence 99999999999999 788888 788877652 1234578999999999753
Q ss_pred ------hhhhhhh--------hhcCCCCeEEEEEeeccccccc---------CC-----CC--CCchhhhhhhhhccCce
Q 047978 108 ------VKRVMLT--------AESNAGARVLVVCSEITVGTFR---------AP-----SD--ENLSCLVNRAIVGDGTA 157 (320)
Q Consensus 108 ------~c~~~l~--------l~~~~~~~~LVv~~e~~s~~~~---------~~-----~~--~~~~~~~~~~~~GDgAa 157 (320)
.|++.++ |++|..+.+||+++|..++... .+ +. +..+....++++||||+
T Consensus 161 ~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~s~~~~~~~~~~~~l~~~~~~p~~~~rpfd~~~~G~~~geGAa 240 (412)
T 4ewg_A 161 IVPTSSACASGSQAIGYAYENIAMGKQTLMLAGGAEELSGPAVAVFDTLYATSTRNDEPHLTPRPFDAKRDGLVVGEGAA 240 (412)
T ss_dssp EEECCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHHHHTTTCBCCCTTCGGGCCCTTBTTCCCBCBBCEEE
T ss_pred cccccchhHHHHHHHHHHHHHHHcCCCCEEEEeccccCCHHHHHHHHHhhccccCCCCCCCCCCCCCCCCCCCceECeEE
Confidence 4876654 7889999999999998753100 00 00 00111235788999999
Q ss_pred EEEEeecCCC--CCCCCeeEEeccCceecCCCcccccccccccceechhHHHHHHHHhhhcCCCCCCCCceEEEEcCCCh
Q 047978 158 ALIVGACPDI--NTERPLFHIVPTAQTILPDSEDAIKGHFRESPLIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGP 235 (320)
Q Consensus 158 A~ll~~~~~~--~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~ 235 (320)
|+||++.+.. .-.....++...+...... . ...++ .....++++++|+++|++++|| +++..|..+.
T Consensus 241 avvL~~~~~A~~~g~~i~a~i~g~~~~~dg~--~----~~~p~---~~~~~~ai~~Al~~Agl~~~dI--d~ve~Hgtgt 309 (412)
T 4ewg_A 241 TLVLEEYEHAKARGATIHAEIVGFGCNSDGA--H----MTQPT---ASTMARAMQLALEDAKLDANAI--AYVNAHGTST 309 (412)
T ss_dssp EEEEEEHHHHHHTTCCCCEEEEEEEEEECSS--C----SSSCC---HHHHHHHHHHHHHHTTCCGGGE--EEEECCCCCC
T ss_pred EEEEccHHHHhhCCCcEEEEEEEEEEcCCCC--C----CCCCC---HHHHHHHHHHHHHHcCCCHHHC--CEEEccCCCC
Confidence 9999985431 0011223343322111100 0 00111 3567789999999999999986 3999999887
Q ss_pred hHHHHH-----HHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCC---------C-----------
Q 047978 236 AVLDQI-----EGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATT---------G----------- 290 (320)
Q Consensus 236 ~~~~~~-----~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~---------G----------- 290 (320)
.+-+.+ .+.++-. -.+ .+ .-..+||+.+|+=.+.+..++..... +.+.| .
T Consensus 310 ~~~D~~E~~al~~~~~~~-~~v-~s--~K~~~GH~~gAsG~~~~~~~~~~l~~-~~ipp~~~~~~~~p~~~~~~~v~~~~ 384 (412)
T 4ewg_A 310 DRGDVAESQATARTFGER-MPI-SS--LKSYVGHTLGACGALEAWWTIEMMKR-NWYAPTLNLTEVDPACAPLDYIRGEA 384 (412)
T ss_dssp HHHHHHHHHHHHHHHCTT-CEE-EC--THHHHCBCGGGHHHHHHHHHHHHHHH-TEECCCTTCCSBCTTSCCCEECCSSC
T ss_pred ccccHHHHHHHHHHcCCC-Cee-eC--ccccccccHHHHHHHHHHHHHHHHhc-CCcCCCCCCCCCCCcccccccccCcc
Confidence 765543 3444421 011 11 23346999988855555544332110 22210 0
Q ss_pred --CCCceEEEEeeccchhhhheeeee
Q 047978 291 --EELEWGVLLGFEAGLTVEAIVLRS 314 (320)
Q Consensus 291 --~~~d~vll~~~G~G~~~~a~~l~~ 314 (320)
...++++.-+||-|.+-.+++++.
T Consensus 385 ~~~~~~~~~~~sfgfGG~na~~vl~~ 410 (412)
T 4ewg_A 385 RAIDAEYVMSNNFAFGGINTSLIFRR 410 (412)
T ss_dssp EECCCSEEEEEEEEGGGEEEEEEEEC
T ss_pred cCCCCCEEEEeeecCCcceEEEEEee
Confidence 011678899999999998898875
No 63
>1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C*
Probab=99.47 E-value=4.7e-13 Score=125.73 Aligned_cols=240 Identities=12% Similarity=0.019 Sum_probs=155.6
Q ss_pred ccchHHHHHHHHHHHHHHc-CCCCCCcCEEEEEeeCC-CC-CCCHHHHHHHHcCCCcc--------hhhhhhh-------
Q 047978 53 VPKVPKLGKEAVSKAIKEW-GQPISKITHLISCSVSG-VD-MPGADYQLTKLLGLKPS--------VKRVMLT------- 114 (320)
Q Consensus 53 ~e~~~~la~~Aa~~aL~~a-g~~~~dId~li~~s~t~-~~-~p~~a~~l~~~LGl~~~--------~c~~~l~------- 114 (320)
+++..+|+.+|++++|+++ |+++++||.++++++++ +. .+..+.+|+..||+++. .|++.+.
T Consensus 27 ~~~~~~L~~~a~~~AL~dA~gl~~~~id~v~~g~~~~~~~~~~~~a~~ia~~lgl~~~~p~~~v~~aCaS~~~Al~~A~~ 106 (390)
T 1wdk_C 27 NTRAEDMSAHLISKVLERNSKVDPGEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSAAQTVSRLCGSSMSALHTAAQ 106 (390)
T ss_dssp TCCHHHHHHHHHHHHHHHCTTSCGGGEEEEEEECSSBSBTTTTTHHHHHHTTSSSCTTSEEEEEECGGGHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeeccccCCCCcHHHHHHHHcCCCCCccEEEEcccchhHHHHHHHHHH
Confidence 6788999999999999999 99999999999998877 43 37789999999999431 3766543
Q ss_pred -hhcCCCCeEEEEEeecccc-ccc-----CCC-------------C----------CCch--------------------
Q 047978 115 -AESNAGARVLVVCSEITVG-TFR-----APS-------------D----------ENLS-------------------- 144 (320)
Q Consensus 115 -l~~~~~~~~LVv~~e~~s~-~~~-----~~~-------------~----------~~~~-------------------- 144 (320)
+++|..+.+||+++|..+. .+. ++. . -+++
T Consensus 107 ~I~~G~~d~vlvgG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~s~e~~~~~a~~s~~~a~~a~~~g 186 (390)
T 1wdk_C 107 AIMTGNGDVFVVGGVEHMGHVSMMHGVDPNPHMSLYAAKASGMMGLTAEMLGKMHGISREQQDAFAVRSHQLAHKATVEG 186 (390)
T ss_dssp HHHTTSCSEEEEEEEEETTTSCTTTTBCCCGGGGGTSCGGGGSHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHcCCCCEEEEeeeeccccCCcccccccCccccccCCcchhHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhcC
Confidence 7889999999999997753 110 000 0 0000
Q ss_pred -----------------------h---h-----------------hhhhh-------hccCceEEEEeecCCC--CCCCC
Q 047978 145 -----------------------C---L-----------------VNRAI-------VGDGTAALIVGACPDI--NTERP 172 (320)
Q Consensus 145 -----------------------~---~-----------------~~~~~-------~GDgAaA~ll~~~~~~--~~~~~ 172 (320)
+ + ..+++ +||||+|+||++.+.. .-..+
T Consensus 187 ~~~~ei~p~~~~~~~~~~~~fd~d~~~r~~~t~e~~~~~~~i~~p~~G~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~ 266 (390)
T 1wdk_C 187 KFKDEIIPMQGYDENGFLKIFDYDETIRPDTTLESLAALKPAFNPKGGTVTAGTSSQITDGASCMIVMSAQRAKDLGLEP 266 (390)
T ss_dssp TTTTTBCCEEEECTTCCEEEECSCTTCCTTCCHHHHHTSCCSSCTTTCCCCGGGBCCCEEEEEEEEEEEHHHHHHTTCCC
T ss_pred CcccceeeeeeccCCCcceeeccccccCCCCCHHHHhcCCCcccCCCCcEechhcCcccchhheeEEecHHHHHHcCCCc
Confidence 0 0 12346 9999999999876532 00122
Q ss_pred eeEEeccCceecCCCcccccccccccceechhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHHHHHHcCCC---c
Q 047978 173 LFHIVPTAQTILPDSEDAIKGHFRESPLIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLE---K 249 (320)
Q Consensus 173 ~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~---~ 249 (320)
..++.+.+.... ... .. ......+++.+|+++|++++|| +++-+|-........+.+.||++ .
T Consensus 267 ~a~I~g~~~~~~--~p~-------~~---~~~~~~a~~~al~~Agl~~~dI--d~ve~~d~f~~~~~~~~~~lg~~~~~~ 332 (390)
T 1wdk_C 267 LAVIRSMAVAGV--DPA-------IM---GYGPVPATQKALKRAGLNMADI--DFIELNEAFAAQALPVLKDLKVLDKMN 332 (390)
T ss_dssp SEEEEEEEEEEC--CGG-------GG---GGTHHHHHHHHHHHHTCCGGGC--CEEEECCSBHHHHHHHHHHTTCGGGHH
T ss_pred cEEEEEEEEecc--Chh-------hc---chhHHHHHHHHHHHcCCChhhC--cEEEeccCCHHHHHHHHHHcCCCCCCC
Confidence 345544332211 000 01 1234578999999999999997 38889988866666678899987 4
Q ss_pred chhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCCCCCCceEEEEeeccchhhhheeeee
Q 047978 250 TKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEAIVLRS 314 (320)
Q Consensus 250 e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~~l~~ 314 (320)
+++..+ .....+||+.+|+=...+..++..... + .+ ++.|....+.|....+++++.
T Consensus 333 ~~vn~~-gg~~~~GHp~gasG~~~~~~~~~~L~~-~---~~---~~gl~~~~~ggG~~~a~~~~~ 389 (390)
T 1wdk_C 333 EKVNLH-GGAIALGHPFGCSGARISGTLLNVMKQ-N---GG---TFGLSTMCIGLGQGIATVFER 389 (390)
T ss_dssp HHBSTT-CCHHHHCCCHHHHHHHHHHHHHHHHHH-T---TC---SEEEEEEEETTTEEEEEEEEC
T ss_pred CcCCCC-cCcccccCCcchhHHHHHHHHHHHHhh-c---CC---CEEEEEecccchheEEEEEEe
Confidence 444321 124457999999855555555444211 1 23 555655444444556677764
No 64
>1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A
Probab=99.44 E-value=1.5e-12 Score=122.46 Aligned_cols=215 Identities=13% Similarity=0.027 Sum_probs=145.9
Q ss_pred hhcccchHHHHHHHHHHHHHHcC----CCCCCcCEEEEEeeCC-CCCCCHHHHHHHHcCCCc-c-------hhhhhhh--
Q 047978 50 YILVPKVPKLGKEAVSKAIKEWG----QPISKITHLISCSVSG-VDMPGADYQLTKLLGLKP-S-------VKRVMLT-- 114 (320)
Q Consensus 50 ~~~~e~~~~la~~Aa~~aL~~ag----~~~~dId~li~~s~t~-~~~p~~a~~l~~~LGl~~-~-------~c~~~l~-- 114 (320)
...++++.+|+.+|++++|+++| +++++||.|++++.++ +..|..+.+|+.+||++. . .|+++++
T Consensus 29 ~~~~~~~~~La~~Aa~~Al~~Ag~~~~l~~~~id~v~~g~~~~~~~~~~~a~~va~~lGl~~~~p~~~v~~aCasg~~Al 108 (393)
T 1afw_A 29 AFKDVNTDYLLYNFLNEFIGRFPEPLRADLNLIEEVACGNVLNVGAGATEHRAACLASGIPYSTPFVALNRQCSSGLTAV 108 (393)
T ss_dssp TTTTCCHHHHHHHHHHHHHHTSCHHHHTCGGGCCCEEEECSSSBGGGHHHHHHHHHHTTCCTTSCEEEEECGGGHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHCCEEEEEecCCCCCCChHHHHHHHHcCCCCCceEEEEcCcCHHHHHHH
Confidence 33478899999999999999999 9999999999998887 556778999999999942 1 3776554
Q ss_pred ------hhcCCCCeEEEEEeecccc-ccc-----------------C---------------------------------
Q 047978 115 ------AESNAGARVLVVCSEITVG-TFR-----------------A--------------------------------- 137 (320)
Q Consensus 115 ------l~~~~~~~~LVv~~e~~s~-~~~-----------------~--------------------------------- 137 (320)
+++|..+.+||+++|..+. .+. .
T Consensus 109 ~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~a~~~~~~~g~sre~~~~~a~~s~ 188 (393)
T 1afw_A 109 NDIANKIKVGQIDIGLALGVESMTNNYKNVNPLGMISSEELQKNREAKKCLIPMGITNENVAANFKISRKDQDEFAANSY 188 (393)
T ss_dssp HHHHHHHHTTSCSEEEEEEEEEHHHHGGGSCTTCSCCCHHHHHCTTGGGGGSCHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCEEEEEEEEecCCCcccccccccccchhhhhcccccccchhHHHHHHHHHHHhCcCHHHHHHHHHHHH
Confidence 7889999999999997653 110 0
Q ss_pred -----------------CC----------CCCc------hh----h--h--h-hhh-------hccCceEEEEeecCCC-
Q 047978 138 -----------------PS----------DENL------SC----L--V--N-RAI-------VGDGTAALIVGACPDI- 167 (320)
Q Consensus 138 -----------------~~----------~~~~------~~----~--~--~-~~~-------~GDgAaA~ll~~~~~~- 167 (320)
|. |++. ++ + + . +++ ++|||+|+||++.+..
T Consensus 189 ~~A~~~~~ag~f~~ei~P~~~~~~~~~~~d~~~r~~~t~e~~~~~rpvf~~~~G~vt~~~~~~~~dGAaavvL~s~~~A~ 268 (393)
T 1afw_A 189 QKAYKAKNEGLFEDEILPIKLPDGSICQSDEGPRPNVTAESLSSIRPAFIKDRGTTTAGNASQVSDGVAGVLLARRSVAN 268 (393)
T ss_dssp HHHHHHHHTTSSTTTBCCEECTTSCEECSCSSCCSCCCHHHHHHCCBSCC---CCCBTTTBCCBEEEEEEEEEEEHHHHH
T ss_pred HHHHhhHhcCCccceeeeeeccCCceeccccccCCCCCHHHHhcCCCcccCCCCCeechhcCcccchhheeeEecHHHHH
Confidence 00 0000 00 0 0 0 122 6999999999876532
Q ss_pred --CCCCCeeEEeccCceecCCCcccccccccccceechhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHHHHHHc
Q 047978 168 --NTERPLFHIVPTAQTILPDSEDAIKGHFRESPLIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKL 245 (320)
Q Consensus 168 --~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~~~l 245 (320)
+ ..+..++.+.+.... ..+ .. ......+++.+|+++|++++||+ ++=.|-......-...+.|
T Consensus 269 ~~g-~~~~a~i~g~~~~~~--~p~-------~~---~~~~~~a~~~al~~Agl~~~dId--~ve~h~~ft~~~l~~~~~l 333 (393)
T 1afw_A 269 QLN-LPVLGRYIDFQTVGV--PPE-------IM---GVGPAYAIPKVLEATGLQVQDID--IFEINEAFAAQALYCIHKL 333 (393)
T ss_dssp HTT-CCCCEEEEEEEEEEC--CGG-------GG---GGHHHHHHHHHHHHHTCCGGGCS--EEEECCSBHHHHHHHHHHH
T ss_pred HcC-CCccEEEEEEEEecc--Chh-------hc---chhHHHHHHHHHHHcCCCHHHCC--EEEEeccCHHHHHHHHHHh
Confidence 1 123345544332211 111 01 12345788999999999999973 8899988765444456789
Q ss_pred CCCcchhhhhHHHHhccCCcccchHHHHHHHHHHh
Q 047978 246 GLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKR 280 (320)
Q Consensus 246 g~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~ 280 (320)
|++++++-.+ --..-+||...|+=...+..++..
T Consensus 334 g~~~~~vn~~-Gg~~a~GHp~gAsG~~~~~~~~~~ 367 (393)
T 1afw_A 334 GIDLNKVNPR-GGAIALGHPLGCTGARQVATILRE 367 (393)
T ss_dssp TCCGGGBSTT-CCHHHHCBCTTTHHHHHHHHHHHH
T ss_pred CCCCcCcCCC-CChhhcCCchhhHHHHHHHHHHHH
Confidence 9987766432 012248999988877788777776
No 65
>1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1
Probab=99.43 E-value=2.2e-12 Score=122.14 Aligned_cols=293 Identities=13% Similarity=0.062 Sum_probs=175.3
Q ss_pred cceEEccccccCCCcccccccHHHHHhhhcC-----Cch------------hHHHHHHHHHhh----hcccchHHHHHHH
Q 047978 5 GKFQETQRPQANPANCVYQTDYPDFYFRITS-----SNH------------MTELKEKFKRMY----ILVPKVPKLGKEA 63 (320)
Q Consensus 5 ~~~~I~a~~~~lP~~~i~~~e~~~~~~~~~~-----~~~------------~~gi~~~~r~~~----~~~e~~~~la~~A 63 (320)
++|.|+++|...|.-. +.+++-+.+..+.+ ..| +..+... ..+. ..-.....|+.+|
T Consensus 9 ~~v~I~G~g~~~p~g~-~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~v~~fd~~-~~~~~~~~~~~d~~~~l~l~a 86 (415)
T 1tqy_B 9 KSVLITGVGVVAPNGL-GLAPYWSAVLDGRHGLGPVTRFDVSRYPATLAGQIDDFHAP-DHIPGRLLPQTDPSTRLALTA 86 (415)
T ss_dssp -CEEEEEEEEEETTEE-SHHHHHHHHHTTCCCEEECTTTTGGGSSCCEEECCCSCCHH-HHSCTTTGGGCCHHHHHHHHH
T ss_pred CCEEEEeeEEECCCCC-CHHHHHHHHHcCCCcEEECCcccccCCCcceEEEeCCCCch-hcCCHHHHHhcCHHHHHHHHH
Confidence 5699999999999874 55555555421111 001 0001110 0111 1112357899999
Q ss_pred HHHHHHHcCCCCCCcC----EEEEEeeCC-C--------------------------CCCCHHHHHHHHcCCCcc-----
Q 047978 64 VSKAIKEWGQPISKIT----HLISCSVSG-V--------------------------DMPGADYQLTKLLGLKPS----- 107 (320)
Q Consensus 64 a~~aL~~ag~~~~dId----~li~~s~t~-~--------------------------~~p~~a~~l~~~LGl~~~----- 107 (320)
+++||+++|+++++|| .++++++++ + ..+..+.+|+..||++..
T Consensus 87 a~~AL~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~gp~~~v~ 166 (415)
T 1tqy_B 87 ADWALQDAKADPESLTDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHGMRGPSSALV 166 (415)
T ss_dssp HHHHHHHTTCCGGGSCGGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTTHHHHHHHHHHTCCSSCEEEE
T ss_pred HHHHHHHcCCCccccCCCCEEEEEeeCCccHHHHHHHHHHHHhcCcccCChhhhhcccchHHHHHHHHHhCCCCceEeec
Confidence 9999999999999999 888888754 2 235678999999999753
Q ss_pred -hhhhhhh--------hhcCCCCeEEEEEeecc-ccc---------ccC----CCCC--CchhhhhhhhhccCceEEEEe
Q 047978 108 -VKRVMLT--------AESNAGARVLVVCSEIT-VGT---------FRA----PSDE--NLSCLVNRAIVGDGTAALIVG 162 (320)
Q Consensus 108 -~c~~~l~--------l~~~~~~~~LVv~~e~~-s~~---------~~~----~~~~--~~~~~~~~~~~GDgAaA~ll~ 162 (320)
.|++.++ |++| .+.+||+++|.. +.. ... |+.. ..+....++++||||+|+||+
T Consensus 167 ~aCsS~l~Al~~A~~~I~~G-~d~~LvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~pfd~~~~G~~~geGaaavvL~ 245 (415)
T 1tqy_B 167 AEQAGGLDALGHARRTIRRG-TPLVVSGGVDSALDPWGWVSQIASGRISTATDPDRAYLPFDERAAGYVPGEGGAILVLE 245 (415)
T ss_dssp CGGGHHHHHHHHHHHHHHHT-CSEEEEEEEECCCSHHHHHHHHTTSCBCCCSCGGGSCCTTSTTCCCBCBBCEEEEEEEE
T ss_pred CCccHHHHHHHHHHHHHHcC-CCEEEEeeecCcCCHHHHHHHHhccCccCCCCCCCCcCCCCCCCCCcceeeeEEEEEEC
Confidence 3776544 7889 999999999982 210 000 1000 001123478999999999999
Q ss_pred ecCCC---CCCCCeeEEeccCceecCCCcccccccccccceechhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHH
Q 047978 163 ACPDI---NTERPLFHIVPTAQTILPDSEDAIKGHFRESPLIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLD 239 (320)
Q Consensus 163 ~~~~~---~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~ 239 (320)
+.+.. +.......+...+....... ....+ . ...++++++|+++|++++|| +++.+|-.+..+-|
T Consensus 246 ~~~~A~~~g~~~i~a~I~g~~~~~dg~~------~~~p~---~-~~~~ai~~al~~Agl~~~dI--d~ve~Hgtgt~~~D 313 (415)
T 1tqy_B 246 DSAAAEARGRHDAYGELAGCASTFDPAP------GSGRP---A-GLERAIRLALNDAGTGPEDV--DVVFADGAGVPELD 313 (415)
T ss_dssp EHHHHHHHTCCCCSEEEEEEEEEECCCT------TCCCC---C-SHHHHHHHHHHHHTCCGGGC--CEEECCCCCSHHHH
T ss_pred cHHHHHHCCCCceEEEEEEEEEccCCCC------CCCCC---H-HHHHHHHHHHHHcCCCHhHC--CEEEEeCCCCcCcC
Confidence 76431 11012233433221111000 00011 1 56788999999999999997 39999988876554
Q ss_pred HH-----HHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCC-----------------C----CCC
Q 047978 240 QI-----EGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATT-----------------G----EEL 293 (320)
Q Consensus 240 ~~-----~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~-----------------G----~~~ 293 (320)
.+ .+.++-..-.+ .+ .-..+||+.+|+=.+.+..++..... +.+.| . .+.
T Consensus 314 ~~E~~al~~~~g~~~~~v-~s--~K~~~GH~~gAaG~~~~~~~~~~l~~-~~ipp~~~~~~~~p~~~~~~v~~~~~~~~~ 389 (415)
T 1tqy_B 314 AAEARAIGRVFGREGVPV-TV--PKTTTGRLYSGGGPLDVVTALMSLRE-GVIAPTAGVTSVPREYGIDLVLGEPRSTAP 389 (415)
T ss_dssp HHHHHHHHHHHCTTCSEE-EC--GGGGTCBCGGGHHHHHHHHHHHHHHH-TSBCCBCSCCCCCGGGCCEECBSSCBCCCC
T ss_pred HHHHHHHHHHhCCCCceE-ec--cchhhccChHHHHHHHHHHHHHHHhc-CCcCCCCCCCCCCCCCCccccCCCCccCCC
Confidence 32 33444221111 11 23347999999877666665543211 22110 0 012
Q ss_pred ceEEEEeeccchhhhheeeeecc
Q 047978 294 EWGVLLGFEAGLTVEAIVLRSIP 316 (320)
Q Consensus 294 d~vll~~~G~G~~~~a~~l~~~~ 316 (320)
++++.-+||.|.+..+++++..|
T Consensus 390 ~~a~~~sfGfgG~n~~~vl~~~~ 412 (415)
T 1tqy_B 390 RTALVLARGRWGFNSAAVLRRFA 412 (415)
T ss_dssp SEEEEEEEETTTEEEEEEEEEC-
T ss_pred CEEEEecCcCCCeEEEEEEecCC
Confidence 67889999999888888887653
No 66
>2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A
Probab=99.42 E-value=1.3e-12 Score=124.31 Aligned_cols=247 Identities=11% Similarity=0.073 Sum_probs=151.5
Q ss_pred hHHHHHHHHHHHHHHcCC-CCCCcC----EEEEEeeCC-C-----------------CC---------CCHHHHHHHHcC
Q 047978 56 VPKLGKEAVSKAIKEWGQ-PISKIT----HLISCSVSG-V-----------------DM---------PGADYQLTKLLG 103 (320)
Q Consensus 56 ~~~la~~Aa~~aL~~ag~-~~~dId----~li~~s~t~-~-----------------~~---------p~~a~~l~~~LG 103 (320)
..+|+.+|+++||+++|+ ++++|| .|+++++++ + .. +..+.+|+..||
T Consensus 88 ~~~l~l~aa~~AL~dAG~~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lg 167 (431)
T 2ix4_A 88 FIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMKYG 167 (431)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCSHHHHHTEEEEEEESSCCHHHHHHHHHHHHTTCGGGCCTTHHHHHCTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCCccccCCCCEEEEEeeccccHHHHHHHHHHHHhcCcccCChhhhhcchhHHHHHHHHHHHC
Confidence 357999999999999999 988887 466666532 1 11 246889999999
Q ss_pred CCcc------hhhhhhh--------hhcCCCCeEEEEEeecccccc----------cC------CCC--CCchhhhhhhh
Q 047978 104 LKPS------VKRVMLT--------AESNAGARVLVVCSEITVGTF----------RA------PSD--ENLSCLVNRAI 151 (320)
Q Consensus 104 l~~~------~c~~~l~--------l~~~~~~~~LVv~~e~~s~~~----------~~------~~~--~~~~~~~~~~~ 151 (320)
++.. .|++.++ |++|..+.+||+++|..+... .. |+. +..+....+++
T Consensus 168 l~gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~~g~~ 247 (431)
T 2ix4_A 168 FQGPNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSVAGFSRSRALSTKFNSSPQEASRPFDCDRDGFV 247 (431)
T ss_dssp CCSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCTTTTCGGGSCCTTBTTCCSBC
T ss_pred CCCceeCccChhHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhccccCccccCCcccccccCCCCCCCce
Confidence 9752 3776654 788999999999999754211 00 000 00111234689
Q ss_pred hccCceEEEEeecCCC---CCCCCeeEEeccCceecCCCcccccccccccceechhHHHHHHHHhhhcCCCCCCCCceEE
Q 047978 152 VGDGTAALIVGACPDI---NTERPLFHIVPTAQTILPDSEDAIKGHFRESPLIADNIDKFLAESFDQVSLNDHDWNSLFW 228 (320)
Q Consensus 152 ~GDgAaA~ll~~~~~~---~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~i~~~l~~~g~~~~d~~~~~~ 228 (320)
+||||+|+||++.+.. + .....++...+....... +. ..... .....++++++|+++|++++|| +++
T Consensus 248 ~gdGAaavvL~~~~~A~~~g-~~i~a~i~g~~~~~dg~~---~~-~p~~~---~~~~~~ai~~al~~agl~~~dI--d~v 317 (431)
T 2ix4_A 248 IGEGSGVIVLEEYEHAKRRG-AKIYAELCGYGMSGDAHH---IT-QPPED---GKGAVLAMTRALRQSGLCPNQI--DYV 317 (431)
T ss_dssp BBCEEEEEEEEEHHHHHHTT-CCCCEEEEEEEEEECCSC---SS-CCCTT---CHHHHHHHHHHHHHHTCCGGGC--CEE
T ss_pred eecceEEEEEccHHHHHhCC-CceEEEEeeeeecCCCCC---CC-CCCCC---HHHHHHHHHHHHHHcCCCHHHc--CEE
Confidence 9999999999876431 1 112223333221110000 00 00011 2556788999999999999997 399
Q ss_pred EEcCCChhHHHH-----HHHHcCCCc--chhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCC------------
Q 047978 229 MMHPIGPAVLDQ-----IEGKLGLEK--TKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATT------------ 289 (320)
Q Consensus 229 i~h~~~~~~~~~-----~~~~lg~~~--e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~------------ 289 (320)
.+|..+..+-|. +.+.++... +++..+ ..-..+||+.+|+-.+.|..++..... +.+.|
T Consensus 318 e~HgtgT~~~D~~E~~al~~~~~~~~~~~~~~v~-s~k~~~GH~~gAsG~~~li~~~l~l~~-~~ipp~~~~~~~~p~~~ 395 (431)
T 2ix4_A 318 NAHATSTPIGDAVEARAIKTVFSEHATSGTLAFS-STKGATGHLLGAAGAVEAIFSILAIHH-GVAPMTLNVKNPDPIFD 395 (431)
T ss_dssp ECCCCSCHHHHHHHHHHHHHHHTHHHHTSCSEEE-CTHHHHCBCGGGHHHHHHHHHHHHHHH-TEECCCTTCSSBCTTCC
T ss_pred EEeCCcCcccCHHHHHHHHHHHcccccCCCceee-cchhhhcccHHHHHHHHHHHHHHHHhc-CCcCCCCCCCCCCCCCC
Confidence 999887665443 333343211 223221 134578999999877776666543211 32210
Q ss_pred -------CC---CCceEEEEeeccchhhhheeeee
Q 047978 290 -------GE---ELEWGVLLGFEAGLTVEAIVLRS 314 (320)
Q Consensus 290 -------G~---~~d~vll~~~G~G~~~~a~~l~~ 314 (320)
.. +.++++.-+||.|.+-..++++.
T Consensus 396 ~~~v~~~~~~~~~~~~a~~~sfGfGG~na~~il~~ 430 (431)
T 2ix4_A 396 KRFMPLTTSKKMLVRTAMSNSFGFGGTNASLLFAS 430 (431)
T ss_dssp SSSCCCSSCEECCCSEEEEEEEETTTEEEEEEEEC
T ss_pred cccCCccccccCCCCEEEEecccCCCeeEEEEEee
Confidence 00 12678888999998888888763
No 67
>2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis}
Probab=99.41 E-value=1.6e-11 Score=116.86 Aligned_cols=291 Identities=12% Similarity=0.032 Sum_probs=171.3
Q ss_pred cceEEccccccCCCcccccccHHHHHhhhcC-----Cchh---HH----------------HHHHHHHhhhcccchHHHH
Q 047978 5 GKFQETQRPQANPANCVYQTDYPDFYFRITS-----SNHM---TE----------------LKEKFKRMYILVPKVPKLG 60 (320)
Q Consensus 5 ~~~~I~a~~~~lP~~~i~~~e~~~~~~~~~~-----~~~~---~g----------------i~~~~r~~~~~~e~~~~la 60 (320)
++|.|+++|...|--. +.+++-+.+..+.+ ..|. .+ +.. +-+..-.....|+
T Consensus 28 ~~vaI~G~g~~~p~g~-~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~---~~~~~~d~~~~l~ 103 (434)
T 2gp6_A 28 PYVVVTGIAMTTALAT-DAETTWKLLLDRQSGIRTLDDPFVEEFDLPVRIGGHLLEEFDHQLTR---IELRRMGYLQRMS 103 (434)
T ss_dssp CCEEEEEEEEECSSCS-SHHHHHHHHHTTCCCEEECCCHHHHHHCCSCCEEECCSCCSTTSSCH---HHHHTCCHHHHHH
T ss_pred CCEEEEeeEEeCCCCC-CHHHHHHHHHcCCCeeeeCCccccccccCccceeEEcCCchhhhCCH---HHHHhCCHHHHHH
Confidence 4699999999999884 55666555421111 0111 00 000 0000112346899
Q ss_pred HHHHHHHHHHcCCC---CCCcCEEEEEeeCC-C-----------------C--------CC-CHHHHHHHHcCCCcc---
Q 047978 61 KEAVSKAIKEWGQP---ISKITHLISCSVSG-V-----------------D--------MP-GADYQLTKLLGLKPS--- 107 (320)
Q Consensus 61 ~~Aa~~aL~~ag~~---~~dId~li~~s~t~-~-----------------~--------~p-~~a~~l~~~LGl~~~--- 107 (320)
.+|+++||+++|++ +++|+ ++++++++ + . .| ..+.+|+..||++..
T Consensus 104 l~aa~~ALedAG~~~~~~~~ig-v~vgt~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~lgl~Gp~~~ 182 (434)
T 2gp6_A 104 TVLSRRLWENAGSPEVDTNRLM-VSIGTGLGSAEELVFSYDDMRARGMKAVSPLTVQKYMPNGAAAAVGLERHAKAGVMT 182 (434)
T ss_dssp HHHHHHHHHHTTCCCCCTTSEE-EEEECSSCSCHHHHHHHHHHTTSCSSSSCTTHHHHHSTTHHHHHHHHHSCCCSCEEC
T ss_pred HHHHHHHHHhcCCCccCCCceE-EEEccccccHHHHHHHHHHHHhcCccccChhhhhccchhhHHHHHhhhhcCCCCeEE
Confidence 99999999999984 55665 56666554 3 1 12 368899999999742
Q ss_pred ---hhhhhhh--------hhcCCCCeEEEEEeeccccc-----------ccC-----CCCCC--chhhhhhhhhccCceE
Q 047978 108 ---VKRVMLT--------AESNAGARVLVVCSEITVGT-----------FRA-----PSDEN--LSCLVNRAIVGDGTAA 158 (320)
Q Consensus 108 ---~c~~~l~--------l~~~~~~~~LVv~~e~~s~~-----------~~~-----~~~~~--~~~~~~~~~~GDgAaA 158 (320)
.|++.++ |+++..+.+||+++|..+.. ... |+... .+....++++||||+|
T Consensus 183 v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd~~~~g~v~gdGAaa 262 (434)
T 2gp6_A 183 PVSACASGAEAIARAWQQIVLGEADAAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFDRDRDGFVFGEGGAL 262 (434)
T ss_dssp EECGGGHHHHHHHHHHHHHHHTSCSEEEEEEECCCCCHHHHHHHHTTTSSCCCCTTCTTTSCCSSBTTCCCCCBBCCEEE
T ss_pred eCCCCcHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHHHHHhcCCCCCCCCceecccccCCCcceecceEE
Confidence 3776654 78899999999999986531 111 11110 1112347899999999
Q ss_pred EEEeecCCC---CCCCCeeEEeccCceecCCCcccccccccccceechhHHHHHHHHhhhcCCCCCCCCceEEEEcCCCh
Q 047978 159 LIVGACPDI---NTERPLFHIVPTAQTILPDSEDAIKGHFRESPLIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGP 235 (320)
Q Consensus 159 ~ll~~~~~~---~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~ 235 (320)
+||++.+.. + ......+...+....... + ...... .....++++++|+++|++++|| +++.+|..+.
T Consensus 263 vvL~~~~~A~~~g-~~i~a~I~g~~~~~Dg~~---~-~~p~~~---~~~~~~ai~~al~~Agl~~~dI--d~ve~Hgtgt 332 (434)
T 2gp6_A 263 LLIETEEHAKARG-ANILARIMGASITSDGFH---M-VAPDPN---GERAGHAITRAIQLAGLAPGDI--DHVNAHATGT 332 (434)
T ss_dssp EEEEEHHHHHTTT-CCCCEEEEEEEEEECCSC---S-SSCCTT---CHHHHHHHHHHHHHTTCCTTTE--EEEECCCCSC
T ss_pred EEeCcHHHHHHCC-CceEEEEEEEEEecCCCC---C-CCCCCC---hHHHHHHHHHHHHHcCCCHHHc--CEEEEeCCcC
Confidence 999876431 1 112233333221110000 0 000111 2567789999999999999996 3999997776
Q ss_pred hHHHHH-----HHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCC---------------------
Q 047978 236 AVLDQI-----EGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATT--------------------- 289 (320)
Q Consensus 236 ~~~~~~-----~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~--------------------- 289 (320)
.+.+.+ .+.++-. ++..+ ..-..+||+.+|+=.+.+..++..... +.+.|
T Consensus 333 ~~~D~~E~~al~~~fg~~--~~~v~-s~k~~~GH~~gAaG~~~~i~~~~~l~~-~~ipp~~~~~~~~p~~~~~~v~~~~~ 408 (434)
T 2gp6_A 333 QVGDLAEGRAINNALGGN--RPAVY-APKSALGHSVGAVGAVESILTVLALRD-QVIPPTLNLVNLDPEIDLDVVAGEPR 408 (434)
T ss_dssp HHHHHHHHHHHHHHHTTC--CCEEC-CTHHHHCBCTTTHHHHHHHHHHHHHHH-SCCCCCSSCSSBCTTCCCEECCSSCC
T ss_pred ccchHHHHHHHHHHhccC--CCCcc-cchhhhcCchhhhHHHHHHHHHHHHhc-CccCCCCCCCCCCCCCCccccCCCcc
Confidence 654332 3334421 22111 135568999988877666555443211 44321
Q ss_pred CCCCceEEEEeeccchhhhheeeee
Q 047978 290 GEELEWGVLLGFEAGLTVEAIVLRS 314 (320)
Q Consensus 290 G~~~d~vll~~~G~G~~~~a~~l~~ 314 (320)
..+.++++.-+||.|.+-.+++|+.
T Consensus 409 ~~~~~~a~~~sfGfGG~na~~vl~~ 433 (434)
T 2gp6_A 409 PGNYRYAINNSFGFGGHNVAIAFGR 433 (434)
T ss_dssp CSCCCEEEEEEEETTTEEEEEEEEC
T ss_pred CCCCCEEEEeCCcCCCeeEEEEEEe
Confidence 0012577888999998888888763
No 68
>2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A
Probab=99.41 E-value=2e-12 Score=123.15 Aligned_cols=242 Identities=12% Similarity=0.034 Sum_probs=154.5
Q ss_pred cccchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCC-C-CCCCHHHHHHHHcCCCc-c-------hhhhhhh-------
Q 047978 52 LVPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSG-V-DMPGADYQLTKLLGLKP-S-------VKRVMLT------- 114 (320)
Q Consensus 52 ~~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~-~-~~p~~a~~l~~~LGl~~-~-------~c~~~l~------- 114 (320)
.+++..+|+.+|+++||+++|+++++||.|+++++++ + ..|..+.+|+..||++. . .|+++++
T Consensus 51 ~~~~~~~La~~Aa~~AL~dAGl~~~~Id~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p~~~v~~aCaSg~~Al~~A~~ 130 (442)
T 2wu9_A 51 KDTYPDDLLAPVLRALIEKTNLNPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVAVRTVNRQCSSGLQAVADVAA 130 (442)
T ss_dssp TTCCHHHHHHHHHHHHHHHHTCCGGGCCCEEEECCSSBHHHHHHHHHHHHHHTTCCTTSCEEEEECGGGHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCccCCCChHHHHHHHHcCCCCCceEEEeCCcCHHHHHHHHHHHH
Confidence 4788999999999999999999999999999998877 3 24567889999999942 1 3776554
Q ss_pred -hhcCCCCeEEEEEeeccccc-cc-----------------------------------------------------CCC
Q 047978 115 -AESNAGARVLVVCSEITVGT-FR-----------------------------------------------------APS 139 (320)
Q Consensus 115 -l~~~~~~~~LVv~~e~~s~~-~~-----------------------------------------------------~~~ 139 (320)
+++|..+.+||+++|..+.. +. +|.
T Consensus 131 ~I~sG~~d~vLvgG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~mg~~A~~~~~~~gisre~~~~~A~~s~~~A~~~p~ 210 (442)
T 2wu9_A 131 AIKAGFYDIGIGAGLESMTTNPMAWEGSVNPAVKKFAQAQNCLLPMGVTSENVAQRFGVSRQEQDQAAVDSHRKAAAATA 210 (442)
T ss_dssp HHHTTSCSEEEEEEEEETTTSCCCCCSCCCGGGGGCHHHHHTTSCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHCCCCCEEEEEEEeecCCCccccccccchhhhhccccccchhHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhChh
Confidence 78899999999999987531 10 000
Q ss_pred CCCc------------------------------------hh----h--h--hhhh-------hccCceEEEEeecCCC-
Q 047978 140 DENL------------------------------------SC----L--V--NRAI-------VGDGTAALIVGACPDI- 167 (320)
Q Consensus 140 ~~~~------------------------------------~~----~--~--~~~~-------~GDgAaA~ll~~~~~~- 167 (320)
.... ++ + + .+++ ++|||+|+||.+.+..
T Consensus 211 ag~~~~ei~pv~~~~~~~~~~~~~~~~~~~De~~r~~~t~e~~~~~rpvfd~~G~vt~~n~s~~~DGAaavvL~s~e~A~ 290 (442)
T 2wu9_A 211 AGKFKDEIIPVKTKLVDPKTGDEKPITVSVDDGIRPTTTLASLGKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAM 290 (442)
T ss_dssp TTTTTTTBCCEEEEEECTTTCCEEEEEECSCTTCCTTCCHHHHHTSCCSSCTTCCCCGGGBCCCEEEEEEEEEEEHHHHH
T ss_pred cccccccccceeeccccccccccCceeeecccCcCCCCCHHHHhcCCCccCCCCCeechhcCCCCCceEEEEEeeHHHHH
Confidence 0000 00 0 0 0112 5999999999876532
Q ss_pred --CCCCCeeEEeccCceecCCCcccccccccccceechhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHHHHHHc
Q 047978 168 --NTERPLFHIVPTAQTILPDSEDAIKGHFRESPLIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKL 245 (320)
Q Consensus 168 --~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~~~l 245 (320)
+ ..+..++.+.+.... ... + . ......+++.+|+++|++++|| +++=.|-......-...+.|
T Consensus 291 ~~g-~~~~a~I~g~~~~~~--~p~-----~--~---~~~~~~A~~~Al~~AGl~~~DI--d~iE~h~aft~~~l~~~~~l 355 (442)
T 2wu9_A 291 QKG-LPVLGVFRTFAAVGV--DPA-----I--M---GIGPAVAIPAAVKAAGLELDDI--DLFEINEAFASQFVYCRNKL 355 (442)
T ss_dssp HHT-CCCCEEEEEEEEEEC--CGG-----G--G---GGHHHHHHHHHHHHTTCCGGGC--CEEEECCSBHHHHHHHHHHH
T ss_pred HcC-CCceEEEEEEEEecC--Cch-----h--c---chHHHHHHHHHHHHcCCCHHHC--CEEEEeCCChHHHHHHHHHh
Confidence 1 123334544332211 110 0 0 1233478899999999999997 38899988766544556889
Q ss_pred CCCcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCCCCCCceEEE-Eeeccchhhhheeeeec
Q 047978 246 GLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVL-LGFEAGLTVEAIVLRSI 315 (320)
Q Consensus 246 g~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll-~~~G~G~~~~a~~l~~~ 315 (320)
|++++++-.+= -..-+||...|+=...+..++.+...++ ..+ ++.|. ..+|.| ...+++++..
T Consensus 356 G~~~~~vN~~G-G~~a~GHp~GAsG~~~~~~~v~~Lr~~~--~~~---~~glas~~~GGG-~~~a~v~~~~ 419 (442)
T 2wu9_A 356 GLDPEKINVNG-GAMAIGHPLGATGARCVATLLHEMKRRG--KDC---RFGVVSMCIGTG-MGAAAVFERG 419 (442)
T ss_dssp TCCGGGBSTTC-CHHHHCCCHHHHHHHHHHHHHHHHHHHC--TTC---CEEEEEEEETTT-EEEEEEEEEC
T ss_pred CCCCCCcCCCc-cHhhcCCchhHHHHHHHHHHHHHHhccC--CCC---CEEEEEeecccc-hheEEEEEec
Confidence 99887764320 1234899987766666666555422111 113 55553 567755 4455666643
No 69
>3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A*
Probab=99.38 E-value=7.9e-12 Score=118.78 Aligned_cols=295 Identities=13% Similarity=0.024 Sum_probs=176.0
Q ss_pred ccceEEccccccCCCcccccccHHHHHhhhcCC-chhHHH---------------HHHH---HHhhhcccchHHHHHHHH
Q 047978 4 LGKFQETQRPQANPANCVYQTDYPDFYFRITSS-NHMTEL---------------KEKF---KRMYILVPKVPKLGKEAV 64 (320)
Q Consensus 4 ~~~~~I~a~~~~lP~~~i~~~e~~~~~~~~~~~-~~~~gi---------------~~~~---r~~~~~~e~~~~la~~Aa 64 (320)
+++|.|+++|...|-- .+.+++-+.+..+.+. ...... ...+ ++.+..-.....|+..|+
T Consensus 22 m~~V~ItG~g~~~p~g-~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~g~~~fd~~~~i~~~~~~~~d~~~~l~~~aa 100 (428)
T 3mqd_A 22 MRRVVVTGMGIVSSIG-SNTEEVTASLREAKSGISRAEEYAELGFRCQVHGAPDIDIESLVDRRAMRFHGRGTAWNHIAM 100 (428)
T ss_dssp CCCEEEEEEEEEBTTB-SSHHHHHHHHHHTCCCEEECHHHHHTTCSCCEEECCCCCHHHHSCTGGGTTCCHHHHHHHHHH
T ss_pred CCCEEEEeeEEECCCc-CCHHHHHHHHHcCCCcceeCCcccccCCCcccccccCCChhhcCCHHHHhhCCHHHHHHHHHH
Confidence 4689999999999986 4566666654211110 000100 0000 111112235678999999
Q ss_pred HHHHHHcCCCCCCcC----EEEEEeeCC-CC--------------------------CCCHHHHHHHHcCCCcc------
Q 047978 65 SKAIKEWGQPISKIT----HLISCSVSG-VD--------------------------MPGADYQLTKLLGLKPS------ 107 (320)
Q Consensus 65 ~~aL~~ag~~~~dId----~li~~s~t~-~~--------------------------~p~~a~~l~~~LGl~~~------ 107 (320)
++||+++|+++++|| .+++++.++ +. .+..+.+|+..||++..
T Consensus 101 ~~Al~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~gp~~tv~~ 180 (428)
T 3mqd_A 101 DQAIADAGLTEEEVSNERTGIIMGSGGPSTRTIVDSADITREKGPKRVGPFAVPKAMSSTASATLATFFKIKGINYSISS 180 (428)
T ss_dssp HHHHHHHTCCHHHHSSTTEEEEEEESSCCHHHHHHHHHHHHHHCGGGGCTTCHHHHSTTHHHHHHHHHTTCCSCEECCCC
T ss_pred HHHHHHcCCChhHccccceEEEEccCCCchHHHHHHHHHHHhcCccccCchhhccccccHHHHHHHHHcCCCCceeeecC
Confidence 999999999999999 688777654 21 34578999999999752
Q ss_pred hhhhhhh--------hhcCCCCeEEEEEeeccccccc---------C------CCC--CCchhhhhhhhhccCceEEEEe
Q 047978 108 VKRVMLT--------AESNAGARVLVVCSEITVGTFR---------A------PSD--ENLSCLVNRAIVGDGTAALIVG 162 (320)
Q Consensus 108 ~c~~~l~--------l~~~~~~~~LVv~~e~~s~~~~---------~------~~~--~~~~~~~~~~~~GDgAaA~ll~ 162 (320)
.|++.++ |++|..+.+||.++|..+.... . |.. +..+....++++||||+|+||+
T Consensus 181 aCsSgl~Ai~~A~~~I~~G~~d~alvgG~e~~s~~~~~~~~~~~~ls~~~~~~p~~~~rpfd~~~~G~v~gEGAaavvL~ 260 (428)
T 3mqd_A 181 ACATSNHCIGNAYEMIQYGKQDRMFAGGCEDLDWTLSVLFDAMGAMSSKYNDTPSTASRAYDKNRDGFVIAGGAGVLVLE 260 (428)
T ss_dssp GGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHHHHHTTCBCCTTTTSGGGSCCTTBTTCCSBCBBCEEEEEEEE
T ss_pred ccHHHHHHHHHHHHHHHcCCCCEEEEEeecccchHHHHHHHHhhhhcccccCCcccccCcccCCCCCcccccceEEEEEc
Confidence 4876544 7889999999999998653110 0 000 0011123578999999999999
Q ss_pred ecCCC--CCCCCeeEEeccCceecCCCcccccccccccceechhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHH
Q 047978 163 ACPDI--NTERPLFHIVPTAQTILPDSEDAIKGHFRESPLIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQ 240 (320)
Q Consensus 163 ~~~~~--~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~ 240 (320)
+.+.. .-..+...+.+.+...... . ...+. .....++++.+|+ |++ +|| +++-.|-.+..+-|.
T Consensus 261 ~~~~A~~~g~~i~a~I~g~~~~~dg~--~----~~~P~---~~~~~~ai~~Al~--gl~-~dI--d~ve~HgtgT~~~D~ 326 (428)
T 3mqd_A 261 DLETALARGAKIYGEIVGYGATSDGY--D----MVAPS---GEGAIRCMKMALS--TVT-SKI--DYINPHATSTPAGDA 326 (428)
T ss_dssp EHHHHHHTTCCCCEEEEEEEEEECCS--C----SSSCC---SHHHHHHHHHHHT--TCC-SCC--CEEECCCCSCHHHHH
T ss_pred cHHHHHhCCCcEEEEEEEEEEcCCCC--C----CCCCC---HHHHHHHHHHHHh--CCc-ccc--CEEEEeCCCCCCcCH
Confidence 76431 0011233443322111000 0 01111 2456688889998 999 887 399999887766554
Q ss_pred H-----HHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCC----------------------CCCC
Q 047978 241 I-----EGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATT----------------------GEEL 293 (320)
Q Consensus 241 ~-----~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~----------------------G~~~ 293 (320)
+ .+.++...+++..+ ..-..+||+.+|+=.+.|..++.... ++.+.| ..+.
T Consensus 327 ~E~~al~~~~~~~~~~~~v~-s~K~~~GH~~gAsG~~~~i~~~~~l~-~~~ipp~~~~~~~~p~~~~~~~~~~~~~~~~~ 404 (428)
T 3mqd_A 327 PEIEAIRQIFGAGDVCPPIA-ATKSLTGHSLGATGVQEAIYSLLMMQ-NNFICESAHIEELDPAFADMPIVRKRIDNVQL 404 (428)
T ss_dssp HHHHHHHHHHCSGGGSCCBC-CTHHHHCBCGGGHHHHHHHHHHHHHH-HTEECCCTTCSSBCGGGTTSCBCSSCEESCCC
T ss_pred HHHHHHHHHhcccCCCceee-cchhhhcccHHHHHHHHHHHHHHHHH-hCCcCCCCCCCCCCcccccCCccCCccccCCC
Confidence 3 45556322221111 02344799998886665554433211 032211 0112
Q ss_pred ceEEEEeeccchhhhheeeeec
Q 047978 294 EWGVLLGFEAGLTVEAIVLRSI 315 (320)
Q Consensus 294 d~vll~~~G~G~~~~a~~l~~~ 315 (320)
++++.-+||-|.+-.+++++..
T Consensus 405 ~~~~~~sfGfGG~Na~~vl~~~ 426 (428)
T 3mqd_A 405 NTVLSNSFGFGGTNATLVFQRY 426 (428)
T ss_dssp CEEEEEEEETTTEEEEEEEECC
T ss_pred CEEEEecCcCCcceEEEEEeec
Confidence 6788889999988888888754
No 70
>2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ...
Probab=99.35 E-value=1.6e-11 Score=115.85 Aligned_cols=292 Identities=14% Similarity=0.059 Sum_probs=174.5
Q ss_pred cceEEccccccCCCcccccccHHHHHhhhcCC-chhHHHHHH-----------H-------HHhhhcccchHHHHHHHHH
Q 047978 5 GKFQETQRPQANPANCVYQTDYPDFYFRITSS-NHMTELKEK-----------F-------KRMYILVPKVPKLGKEAVS 65 (320)
Q Consensus 5 ~~~~I~a~~~~lP~~~i~~~e~~~~~~~~~~~-~~~~gi~~~-----------~-------r~~~~~~e~~~~la~~Aa~ 65 (320)
++|.|+++|...|-- .+.+++-+.+..+.+. ..+...... + ++-+..-.....|+.+|++
T Consensus 2 ~~v~ItG~g~~~p~g-~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~v~fd~~~~~~~~~~~~~d~~~~l~l~aa~ 80 (406)
T 2vba_A 2 KRAVITGLGIVSSIG-NNQQEVLASLREGRSGITFSQELKDSGMRSHVWGNVKLDTTGLIDRKVVRFMSDASIYAFLSME 80 (406)
T ss_dssp CCEEEEEEEEEBTTB-SSHHHHHHHHHHTCCCEEECHHHHHTTCSCCEEECCCCCCTTSSCHHHHTTCCHHHHHHHHHHH
T ss_pred CCEEEEeeEEECCCC-CCHHHHHHHHHcCCCeEEeCCcccccCCccceEEEecCChhhcCCHHHHHhcCHHHHHHHHHHH
Confidence 679999999999987 5566665554211110 000100000 0 0000011234689999999
Q ss_pred HHHHHcCCCCCCcCE-----EEEEeeCC-C---------------------------CCCCHHHHHHHHcCCCcc-----
Q 047978 66 KAIKEWGQPISKITH-----LISCSVSG-V---------------------------DMPGADYQLTKLLGLKPS----- 107 (320)
Q Consensus 66 ~aL~~ag~~~~dId~-----li~~s~t~-~---------------------------~~p~~a~~l~~~LGl~~~----- 107 (320)
+||+++|+++++||. |+++++++ + ..+..+.+|+..||++..
T Consensus 81 ~Al~dAg~~~~~i~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl~Gp~~~v~ 160 (406)
T 2vba_A 81 QAIADAGLSPEAYQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNYSIS 160 (406)
T ss_dssp HHHHHHTCCHHHHTTCTTEEEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHSTTHHHHHHHTTTTCCSCEEEEE
T ss_pred HHHHHCCCChhHcCCCCCEEEEEEECCcchHHHHHHHHHHHhccCccccChhhhhhhhhHHHHHHHHHhccCCCceeeec
Confidence 999999999988885 88887654 2 012467899999999753
Q ss_pred -hhhhhhh--------hhcCCCCeEEEEEeecccccc---------cC------CCCC--CchhhhhhhhhccCceEEEE
Q 047978 108 -VKRVMLT--------AESNAGARVLVVCSEITVGTF---------RA------PSDE--NLSCLVNRAIVGDGTAALIV 161 (320)
Q Consensus 108 -~c~~~l~--------l~~~~~~~~LVv~~e~~s~~~---------~~------~~~~--~~~~~~~~~~~GDgAaA~ll 161 (320)
.|++.++ |++|..+.+||.++|..+... .. |+.. ..+....++++||||+|+||
T Consensus 161 taCsS~l~Al~~A~~~I~~G~~d~alvgG~e~~~~~~~~~~~~~~~ls~~~~~~p~~~~~pfd~~~~G~v~gEGaaavvL 240 (406)
T 2vba_A 161 SACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWEMACEFDAMGALSTKYNDTPEKASRTYDAHRDGFVIAGGGGMVVV 240 (406)
T ss_dssp CGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHHHHHTTCBCCSCTTSGGGSCCTTBTTCCSBCBBCEEEEEEE
T ss_pred cchhHHHHHHHHHHHHHHcCCCCEEEEeeeccccChHHHHHhhccccccccCCCCccccCcCcCCCCceEeeceEEEEEe
Confidence 3776544 788999999999999864320 00 1100 00112347899999999999
Q ss_pred eecCCC--CCCCCeeEEeccCceecCCCcccccccccccceechhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHH
Q 047978 162 GACPDI--NTERPLFHIVPTAQTILPDSEDAIKGHFRESPLIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLD 239 (320)
Q Consensus 162 ~~~~~~--~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~ 239 (320)
++.+.. .-.....++...+....... ...++ .....++++.+|+++| +|| .++..|..+..+-|
T Consensus 241 ~~~~~A~~~g~~i~a~I~g~~~~~dg~~------~t~p~---~~~~~~ai~~al~~ag---~dI--d~ve~HgtgT~~gD 306 (406)
T 2vba_A 241 EELEHALARGAHIYAEIVGYGATSDGAD------MVAPS---GEGAVRCMKMAMHGVD---TPI--DYLNSHGTSTPVGD 306 (406)
T ss_dssp EEHHHHHHTTCCCCEEEEEEEEEECCSC------TTSCC---SHHHHHHHHHHHTTCC---SCC--CEEECCCCSCHHHH
T ss_pred CcHHHHHHCCCeEEEEEEEEEEcCCCCC------CCCCC---HHHHHHHHHHHHhhCC---CCc--cEEEeeCccCcccC
Confidence 976431 00112233433221111110 00111 2556788999999999 675 39999998877644
Q ss_pred H-----HHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCC---------C------------CCC
Q 047978 240 Q-----IEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATT---------G------------EEL 293 (320)
Q Consensus 240 ~-----~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~---------G------------~~~ 293 (320)
. +.+.++...-.+ .+ +-..+||+.+|+=.+.+..++..... +.+.| . .+.
T Consensus 307 ~~E~~al~~~fg~~~~~v-~s--~K~~~GH~~gAaG~~~~i~~~l~l~~-~~ipp~~~~~~~~~~~~~~~~v~~~~~~~~ 382 (406)
T 2vba_A 307 VKELAAIREVFGDKSPAI-SA--TKAMTGHSLGAAGVQEAIYSLLMLEH-GFIAPSINIEELDEQAAGLNIVTETTDREL 382 (406)
T ss_dssp HHHHHHHHHHHTTCCCEE-EC--THHHHCBCGGGHHHHHHHHHHHHHHH-TEECCCCCCSSBCTTCTTSEECCSCEECCC
T ss_pred HHHHHHHHHHhCcCCCce-eC--chhhhcccHHHHHHHHHHHHHHHHhc-CccCCCCCCCCCCCCccccccCCcccCCCC
Confidence 3 445566432122 22 24458999999887777666543211 33210 0 012
Q ss_pred ceEEEEeeccchhhhheeeeec
Q 047978 294 EWGVLLGFEAGLTVEAIVLRSI 315 (320)
Q Consensus 294 d~vll~~~G~G~~~~a~~l~~~ 315 (320)
++++.-+||-|.+-..++++..
T Consensus 383 ~~a~~~sfGfgG~na~~vl~~~ 404 (406)
T 2vba_A 383 TTVMSNSFGFGGTNATLVMRKL 404 (406)
T ss_dssp CEEEEEEEETTTEEEEEEEECC
T ss_pred CEEEEcCCCCCCeEEEEEEEeC
Confidence 5678889999988888888753
No 71
>2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A*
Probab=99.33 E-value=3.7e-11 Score=113.74 Aligned_cols=290 Identities=11% Similarity=0.047 Sum_probs=171.9
Q ss_pred ccceEEccccccCCCcccccccHHHHHhhhcC-----Cchh--H-H----------------HHHHHHHhhhcccchHHH
Q 047978 4 LGKFQETQRPQANPANCVYQTDYPDFYFRITS-----SNHM--T-E----------------LKEKFKRMYILVPKVPKL 59 (320)
Q Consensus 4 ~~~~~I~a~~~~lP~~~i~~~e~~~~~~~~~~-----~~~~--~-g----------------i~~~~r~~~~~~e~~~~l 59 (320)
.++|.|+++|...|-- .+.+++-+.+..+.+ ..|. . + +.. +-+..-.....|
T Consensus 11 ~~~vaI~G~g~~~p~g-~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~---~~~~~~d~~~~l 86 (416)
T 2wge_A 11 FPSVVVTAVTATTSIS-PDIESTWKGLLAGESGIHALEDEFVTKWDLAVKIGGHLKDPVDSHMGR---LDMRRMSYVQRM 86 (416)
T ss_dssp SCCEEEEEEEEEESSC-SSHHHHHHHHHTTCCCCEECCCHHHHHHTCSCCEEBCCSSCGGGGCCH---HHHHHSCHHHHH
T ss_pred CCcEEEEeeEEECCCC-CCHHHHHHHHHcCCCEEEeCCccccccccCCccEEEEeCCchhhhCCH---HHHHhcCHHHHH
Confidence 3569999999999988 456666555421111 0110 0 0 000 000001234579
Q ss_pred HHHHHHHHHHHcCCCCCCcCE----EEEEeeCC-C-----------------CCC---------CHHHHHHHHcCCCcc-
Q 047978 60 GKEAVSKAIKEWGQPISKITH----LISCSVSG-V-----------------DMP---------GADYQLTKLLGLKPS- 107 (320)
Q Consensus 60 a~~Aa~~aL~~ag~~~~dId~----li~~s~t~-~-----------------~~p---------~~a~~l~~~LGl~~~- 107 (320)
+.+|+++||+++|+ +++|. |+++++++ + ..| ..+.+|+..||++..
T Consensus 87 ~l~aa~~AL~dAG~--~~~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~gp~ 164 (416)
T 2wge_A 87 GKLLGGQLWESAGS--PEVDPDRFAVVVGTGLGGAERIVESYDLMNAGGPRKVSPLAVQMIMPNGAAAVIGLQLGARAGV 164 (416)
T ss_dssp HHHHHHHHHHHTTC--CCCCGGGEEEEEECCSCCCTHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCSCE
T ss_pred HHHHHHHHHHHcCC--CccCCCceEEEEeecCCcHHHHHHHHHHHHhcCcccCCchhhccccchhHHHHHHHHhccCCCc
Confidence 99999999999998 55553 77777665 3 122 468899999999743
Q ss_pred -----hhhhhhh--------hhcCCCCeEEEEEeecccccc----------cC-----CCCC--CchhhhhhhhhccCce
Q 047978 108 -----VKRVMLT--------AESNAGARVLVVCSEITVGTF----------RA-----PSDE--NLSCLVNRAIVGDGTA 157 (320)
Q Consensus 108 -----~c~~~l~--------l~~~~~~~~LVv~~e~~s~~~----------~~-----~~~~--~~~~~~~~~~~GDgAa 157 (320)
.|++.++ |++|..+.+||+++|..+... .. |+.. ..+....+++|||||+
T Consensus 165 ~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~pfd~~~dg~v~geGaa 244 (416)
T 2wge_A 165 MTPVSACSSGSEAIAHAWRQIVMGDADVAVCGGVEGPIEALPIAAFSMMRAMSTRNDEPERASRPFDKDRDGFVFGEAGA 244 (416)
T ss_dssp ECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEECCCCCCHHHHHHHHTTTCBCCCTTSGGGSCCTTBTTCCCBCBBCEEE
T ss_pred ccccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecCccchHHHHHHHhcchhhccccCCcccccccccCCCCccccCceE
Confidence 3776554 788999999999999865420 11 1000 0011235789999999
Q ss_pred EEEEeecCCC---CCCCCeeEEeccCceecCCCcccccccccccceechhHHHHHHHHhhhcCCCCCCCCceEEEEcCCC
Q 047978 158 ALIVGACPDI---NTERPLFHIVPTAQTILPDSEDAIKGHFRESPLIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIG 234 (320)
Q Consensus 158 A~ll~~~~~~---~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~ 234 (320)
|+||++.+.. + ..+...+...+...... ... ..... .....++++++|+++|++++|| +++.+|..+
T Consensus 245 avvL~~~~~A~~~g-~~~~a~i~g~~~~~dg~--~~~--~p~~~---~~~~~~ai~~al~~agl~~~dI--d~ve~Hgtg 314 (416)
T 2wge_A 245 LMLIETEEHAKARG-AKPLARLLGAGITSDAF--HMV--APAAD---GVRAGRAMTRSLELAGLSPADI--DHVNAHGTA 314 (416)
T ss_dssp EEEEEEHHHHHHTT-CCCSEEEEEEEEEECCS--CSS--SCCTT---CHHHHHHHHHHHHHHTCCGGGC--CEEECCCCC
T ss_pred EEEECcHHHHHHCC-CceEEEEEEEEEecCCC--Ccc--CCCCC---hHHHHHHHHHHHHHcCCCHHHC--CEEEECCCC
Confidence 9999876431 1 11223443322111000 000 00111 2466789999999999999997 399999887
Q ss_pred hhHHHHH----HHHcCCCcchhh-hhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCC--------------------
Q 047978 235 PAVLDQI----EGKLGLEKTKLR-ETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATT-------------------- 289 (320)
Q Consensus 235 ~~~~~~~----~~~lg~~~e~~~-~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~-------------------- 289 (320)
..+-|.+ .+.++.. ++. .+ .-..+||+.+|+=.+.|...+..... +.+.|
T Consensus 315 T~~gD~~E~~al~~~~~~--~~~v~s--~k~~~GH~~gAsG~~~~i~~~l~l~~-~~ipp~~~~~~~~p~~~~~~v~~~~ 389 (416)
T 2wge_A 315 TPIGDAAEANAIRVAGCD--QAAVYA--PKSALGHSIGAVGALESVLTVLTLRD-GVIPPTLNYETPDPEIDLDVVAGEP 389 (416)
T ss_dssp CHHHHHHHHHHHHHTTCT--TSEEEC--THHHHCBCGGGHHHHHHHHHHHHHHH-TEECCCTTCCSBCTTTCCEECCSSC
T ss_pred CcCCCHHHHHHHHHhccC--CCCccC--CcccccCcHHHHHHHHHHHHHHHHhc-CCcCCCCCCCCCCCCCCcccCCCCC
Confidence 7654443 2334421 222 22 35568999988877766555432111 33210
Q ss_pred -CCCCceEEEEeeccchhhhheeeee
Q 047978 290 -GEELEWGVLLGFEAGLTVEAIVLRS 314 (320)
Q Consensus 290 -G~~~d~vll~~~G~G~~~~a~~l~~ 314 (320)
..+.++++.-+||-|.+-..++++.
T Consensus 390 ~~~~~~~a~~~sfGfGG~na~~vl~~ 415 (416)
T 2wge_A 390 RYGDYRYAVNNSFGFGGHNVALAFGR 415 (416)
T ss_dssp EECCCCEEEEEEEETTTEEEEEEEEC
T ss_pred ccCCCCEEEEeCcccCceeEEEEEEe
Confidence 0012578888999988888888763
No 72
>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea}
Probab=99.23 E-value=2e-10 Score=118.34 Aligned_cols=249 Identities=13% Similarity=0.092 Sum_probs=160.2
Q ss_pred chHHHHHHHHHHHHHHcCCCCCCcCE----EEEEeeCC-CCC-------------C-----CHHHHHHHHcCCCcc----
Q 047978 55 KVPKLGKEAVSKAIKEWGQPISKITH----LISCSVSG-VDM-------------P-----GADYQLTKLLGLKPS---- 107 (320)
Q Consensus 55 ~~~~la~~Aa~~aL~~ag~~~~dId~----li~~s~t~-~~~-------------p-----~~a~~l~~~LGl~~~---- 107 (320)
....|+.+|+.+||+++|+++++||. |+++++++ |.. | ..+.+|+..||++..
T Consensus 94 p~~rL~leaa~eALedAGi~~~~i~~~~~gV~vG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl~Gps~tv 173 (915)
T 2qo3_A 94 PQQRLLLETSWELVENAGIDPHSLRGTATGVFLGVAKFGYGEDTAAAEDVEGYSVTGVAPAVASGRISYTMGLEGPSISV 173 (915)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGGTTBCCEEEEECCCCCTTTTCC---CTTCHHHHTTCHHHHHHHHHHHHTBCSCEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCChHHcCCcceEEEEEecCchHHhhhcccccccccccccccccHHHHHHHHHhCCCCCEEEE
Confidence 34689999999999999999999994 77777766 431 1 357899999999753
Q ss_pred --hhhhhhh--------hhcCCCCeEEEEEeeccccc----------ccCCCCC--CchhhhhhhhhccCceEEEEeecC
Q 047978 108 --VKRVMLT--------AESNAGARVLVVCSEITVGT----------FRAPSDE--NLSCLVNRAIVGDGTAALIVGACP 165 (320)
Q Consensus 108 --~c~~~l~--------l~~~~~~~~LVv~~e~~s~~----------~~~~~~~--~~~~~~~~~~~GDgAaA~ll~~~~ 165 (320)
.|++.++ |++|.++.+||+++|..+.. ...++.. ..+....++++||||+|+||++.+
T Consensus 174 ~taCsSsl~Al~~A~~~I~~G~~d~aLvgGve~~~~p~~~~~~~~~~~ls~~g~~~~Fd~~adG~v~gEGagavVL~~~~ 253 (915)
T 2qo3_A 174 DTACSSSLVALHLAVESLRKGESSMAVVGGAAVMATPGVFVDFSRQRALAADGRSKAFGAGADGFGFSEGVTLVLLERLS 253 (915)
T ss_dssp ECGGGHHHHHHHHHHHHHHTTSCSSEEEEEEECCSSTHHHHHHHTTTCBCSSCCCCTTBTTCCCBCBBCEEEEEEEEEHH
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCCEEEEeEehhhcCHHHHHHHhhhcccCCCCCcccccCCCCceeecCceEEEEEeEhH
Confidence 3876544 78899999999999987531 1111100 011223578999999999998754
Q ss_pred CC---CCCCCeeEEeccCceecCCCcccccccccccceechhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHH----
Q 047978 166 DI---NTERPLFHIVPTAQTILPDSEDAIKGHFRESPLIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVL---- 238 (320)
Q Consensus 166 ~~---~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~---- 238 (320)
.. + ......+.+.+....+.... ...++ .....++++++++++|++++|| .++.+|..+..+-
T Consensus 254 ~A~~~g-~~i~a~I~G~~~~~dg~~~~----~~~p~---~~~~~~~i~~Al~~Agl~p~dI--d~ve~HgtgT~~gD~~E 323 (915)
T 2qo3_A 254 EARRNG-HEVLAVVRGSALNQDGASNG----LSAPS---GPAQRRVIRQALESCGLEPGDV--DAVEAHGTGTALGDPIE 323 (915)
T ss_dssp HHHHTT-CCCCEEEEEEEEEECCSCSS----TTCCC---HHHHHHHHHHHHHHTTCCGGGC--CEEECCCCCCTTTHHHH
T ss_pred HhhhCC-CCeEEEEEEEEEecCCCccC----CCCCC---HHHHHHHHHHHHHHcCCCHHHC--cEEEecCCCCccCCHHH
Confidence 31 1 11122333222111111100 01111 3567789999999999999997 3999998765443
Q ss_pred -HHHHHHcCCCcc---hhh-hhHHHHhccCCcccchHHHHHHHHHHhchhcCCCC-------------------------
Q 047978 239 -DQIEGKLGLEKT---KLR-ETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKAT------------------------- 288 (320)
Q Consensus 239 -~~~~~~lg~~~e---~~~-~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~------------------------- 288 (320)
..+.+.++.... .+. .+ .-..+||+.+|+=+..|..++.... ++.+.
T Consensus 324 ~~al~~~f~~~~~~~~~~~vgs--~K~~iGH~~~AaG~~~lik~~l~L~-~~~ipp~~~~~~~~p~~~~~~~~~~~~~~~ 400 (915)
T 2qo3_A 324 ANALLDTYGRDRDADRPLWLGS--VKSNIGHTQAAAGVTGLLKVVLALR-NGELPATLHVEEPTPHVDWSSGGVALLAGN 400 (915)
T ss_dssp HHHHHHHTSSSCCTTSCEEEEC--THHHHCBCGGGHHHHHHHHHHHHHH-HTEECCCSSCSSBCTTSCCSSSSEEECSSC
T ss_pred HHHHHHHhccccCCCCcccccC--cccceeCCccccchHHHHHHHHHHh-cCCCCCCCCCCCCCcccccccCceeeecCC
Confidence 345566775421 221 12 4667899999887777766543211 13321
Q ss_pred ----CCCCCceEEEEeeccchhhhheeeeecc
Q 047978 289 ----TGEELEWGVLLGFEAGLTVEAIVLRSIP 316 (320)
Q Consensus 289 ----~G~~~d~vll~~~G~G~~~~a~~l~~~~ 316 (320)
.+.+..+++.-+||.|.+-..++++-.|
T Consensus 401 ~~w~~~~~~r~a~v~sfG~gG~Nah~vl~~~~ 432 (915)
T 2qo3_A 401 QPWRRGERTRRAAVSAFGISGTNAHVIVEEAP 432 (915)
T ss_dssp EECCSSSSCCEEEEEEECTTSEEEEEEEEECC
T ss_pred cccccCCCCcEEEEeeecCCCceEEEEEeecc
Confidence 1111257888899999998889998654
No 73
>2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea}
Probab=99.15 E-value=3.5e-10 Score=116.59 Aligned_cols=248 Identities=14% Similarity=0.095 Sum_probs=157.1
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCcCE----EEEEeeCC-CCC--------------C-----CHHHHHHHHcCCCcc----
Q 047978 56 VPKLGKEAVSKAIKEWGQPISKITH----LISCSVSG-VDM--------------P-----GADYQLTKLLGLKPS---- 107 (320)
Q Consensus 56 ~~~la~~Aa~~aL~~ag~~~~dId~----li~~s~t~-~~~--------------p-----~~a~~l~~~LGl~~~---- 107 (320)
...|+.+|+.+||+++|+++++||. |++++++. |.. + ..+.+|+..||++..
T Consensus 116 ~~rl~leaa~eALedAGi~~~~i~~~~~gV~vG~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl~Gps~tv 195 (917)
T 2hg4_A 116 QQRIMLEISWEALERAGHDPVSLRGSATGVFTGVGTVDYGPRPDEAPDEVLGYVGTGTASSVASGRVAYCLGLEGPAMTV 195 (917)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGGTTSCEEEEEEECCCCCSCCTTSSCGGGGGGHHHHHCHHHHHHHHHHHHTCCSCEEEE
T ss_pred HHHHHHHHHHHHHHHcCCChHHcCCcceEEEEEeCCchhhhhhhcCccccCcccccccccchHHHHHHHhcCCCCCeEee
Confidence 4679999999999999999999995 77777665 421 1 257899999999753
Q ss_pred --hhhhhhh--------hhcCCCCeEEEEEeecccccc----------cCCCCC--CchhhhhhhhhccCceEEEEeecC
Q 047978 108 --VKRVMLT--------AESNAGARVLVVCSEITVGTF----------RAPSDE--NLSCLVNRAIVGDGTAALIVGACP 165 (320)
Q Consensus 108 --~c~~~l~--------l~~~~~~~~LVv~~e~~s~~~----------~~~~~~--~~~~~~~~~~~GDgAaA~ll~~~~ 165 (320)
.|++.+. |++|.++.+||.++|..+... ..|+.. ..+....++++||||+|+||++.+
T Consensus 196 ~taCsSsl~Al~~A~~~I~~G~~d~aLvgGv~~~~~p~~~~~~~~~~~ls~~g~~~pFd~~adG~~~gEGagavVL~~l~ 275 (917)
T 2hg4_A 196 DTACSSGLTALHLAMESLRRDECGLALAGGVTVMSSPGAFTEFRSQGGLAADGRCKPFSKAADGFGLAEGAGVLVLQRLS 275 (917)
T ss_dssp ECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSTHHHHHHTTSSCBCTTSCCCTTBTTCCCBCBBCEEEEEEEEEHH
T ss_pred cCCcHHHHHHHHHHHHHHHcCCCCEEEEeEeccccChhhhHhhhhccCcCCccccCcccccccCCCCcceEEEEEEeeHH
Confidence 3776543 788999999999999875321 011100 011234578999999999998754
Q ss_pred CC---CCCCCeeEEeccCceecCCCcccccccccccceechhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHH---
Q 047978 166 DI---NTERPLFHIVPTAQTILPDSEDAIKGHFRESPLIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLD--- 239 (320)
Q Consensus 166 ~~---~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~--- 239 (320)
.. + ......+.+.+......... ...++ .....++++++++++|++++|| .++..|..+..+-|
T Consensus 276 ~A~~~g-~~i~a~I~G~~~~~dg~~~~----~~~P~---~~~q~~ai~~Al~~Agl~p~dI--d~veaHgtgT~~gD~~E 345 (917)
T 2hg4_A 276 AARREG-RPVLAVLRGSAVNQDGASNG----LTAPS---GPAQQRVIRRALENAGVRAGDV--DYVEAHGTGTRLGDPIE 345 (917)
T ss_dssp HHHHTT-CCCCEEEEEEEEEECCSCSS----SSCCC---HHHHHHHHHHHHHHHTCCGGGC--CEEECCCCCCTTHHHHH
T ss_pred HHHhCC-CCeEEEEEEEEEecCCCccC----CCCCC---HHHHHHHHHHHHHHcCCCHHHC--CEEeeccCCCccCcHHH
Confidence 31 1 11122333222111111000 01111 3566788999999999999997 39999998876544
Q ss_pred --HHHHHcCCCc--c-hhh-hhHHHHhccCCcccchHHHHHHHHHHhchhcCCCC-------------------------
Q 047978 240 --QIEGKLGLEK--T-KLR-ETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKAT------------------------- 288 (320)
Q Consensus 240 --~~~~~lg~~~--e-~~~-~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~------------------------- 288 (320)
.+.+.+|... + .+. .+ +-..+||+.+|+=+..|..++..... +.+.
T Consensus 346 ~~al~~~fg~~~~~~~~~~vgs--~K~~iGH~~~AaG~~~lik~vl~L~~-~~ipp~~~~~~~~p~i~~~~~~~~v~~~~ 422 (917)
T 2hg4_A 346 VHALLSTYGAERDPDDPLWIGS--VKSNIGHTQAAAGVAGVMKAVLALRH-GEMPRTLHFDEPSPQIEWDLGAVSVVSQA 422 (917)
T ss_dssp HHHHHTTTTTSSCTTSCCEEEC--THHHHCBCGGGTTHHHHHHHHHHHHH-TEECCCTTCCSBCTTSCC---CCEECCSC
T ss_pred HHHHHHHhccccCCCCceeccC--cccceecchhhhHHHHHHHHHHHHhc-CCcCCCCCCCCCCccCCccccceeecCCc
Confidence 3445566422 1 121 12 35668999988777666655432110 2210
Q ss_pred ----CCCCCceEEEEeeccchhhhheeeeecc
Q 047978 289 ----TGEELEWGVLLGFEAGLTVEAIVLRSIP 316 (320)
Q Consensus 289 ----~G~~~d~vll~~~G~G~~~~a~~l~~~~ 316 (320)
.+.+..+++.-+||.|.+-..++++-.|
T Consensus 423 ~~w~~~~~~r~a~v~sfG~gG~Nah~vl~~~~ 454 (917)
T 2hg4_A 423 RSWPAGERPRRAGVSSFGISGTNAHVIVEEAP 454 (917)
T ss_dssp EECCCCSSCCEEEEEEECTTSEEEEEEEEECC
T ss_pred ccCCCCCCCCEEEEeeecCCCceEEEEeccCC
Confidence 0111257888899999999999998765
No 74
>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A
Probab=98.95 E-value=1.8e-08 Score=104.33 Aligned_cols=293 Identities=14% Similarity=0.073 Sum_probs=177.5
Q ss_pred ccceEEccccccCCCcccccccHHHHHhhhc------CCchh-----------------------HHHHHHHHHhhhccc
Q 047978 4 LGKFQETQRPQANPANCVYQTDYPDFYFRIT------SSNHM-----------------------TELKEKFKRMYILVP 54 (320)
Q Consensus 4 ~~~~~I~a~~~~lP~~~i~~~e~~~~~~~~~------~~~~~-----------------------~gi~~~~r~~~~~~e 54 (320)
.++|-|+|+|.-+|.. .+.+++-+.+..+. +..|. -+|..++ +..-.
T Consensus 3 ~~~IaIvGmg~r~P~~-~~~~~~W~~l~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~i~~~e---a~~mD 78 (965)
T 3hhd_A 3 GEEVVIAGMSGKLPES-ENLQEFWDNLIGGVDMVTDDDRRWKAGLYGLPRRSGKLKDLSRFDASFFGVHPKQ---AHTMD 78 (965)
T ss_dssp CCCEEEEEEEEEBTTB-SSHHHHHHHHHTTCCCEECSSSSSCTTGGGCCSCEECCSCSSCCCTTTTTCCHHH---HHTSC
T ss_pred CCCEEEEeeeEECCCC-CCHHHHHHHHHcCCCcccCCCcccccccccCcccccccCChhhcChhhcCCCHHH---HhhcC
Confidence 4679999999999985 55666655542111 00110 0111111 11111
Q ss_pred chHHHHHHHHHHHHHHcCCCCCCcC----EEEEEeeCC-C-------------------CCCCHHHHHHHHcCCCcc---
Q 047978 55 KVPKLGKEAVSKAIKEWGQPISKIT----HLISCSVSG-V-------------------DMPGADYQLTKLLGLKPS--- 107 (320)
Q Consensus 55 ~~~~la~~Aa~~aL~~ag~~~~dId----~li~~s~t~-~-------------------~~p~~a~~l~~~LGl~~~--- 107 (320)
....|+.+|+.+||+++|+++++|| .+++++++. | ..+..+.+|+..||++..
T Consensus 79 p~~rL~leaa~eALedAGi~~~~i~~~~~Gv~vG~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl~GPs~t 158 (965)
T 3hhd_A 79 PQLRLLLEVTYEAIVDGGINPDSLRGTHTGVWVGVSGSETSEALSRDPETLVGYSMVGCQRAMMANRLSFFFDFRGPSIA 158 (965)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGGTTSCCEEEEEECCCHHHHHHTSCTTTCCTHHHHHHSTTHHHHHHHHHHTCCSCEEE
T ss_pred HHHHHHHHHHHHHHHHcCCChHHcCCceeEEEEeccchhHHHHHhcCccccCcccccccccchHHHHHHHHhCCCCCeee
Confidence 2456999999999999999999999 788877665 3 233468899999999753
Q ss_pred ---hhhhhhh--------hhcCCCCeEEEEEeeccccc----------ccCCCCC--CchhhhhhhhhccCceEEEEeec
Q 047978 108 ---VKRVMLT--------AESNAGARVLVVCSEITVGT----------FRAPSDE--NLSCLVNRAIVGDGTAALIVGAC 164 (320)
Q Consensus 108 ---~c~~~l~--------l~~~~~~~~LVv~~e~~s~~----------~~~~~~~--~~~~~~~~~~~GDgAaA~ll~~~ 164 (320)
.|++.++ |++|.++.+|+.++|..+.. ...|+.. ..+....++.+||||+++||++.
T Consensus 159 vdtACSSsl~Al~~A~~~I~~G~~d~aLagGv~~~~~p~~~~~~~~~~~ls~~g~~~~Fd~~adG~~~gEGagavvL~~l 238 (965)
T 3hhd_A 159 LDTACSSSLMALQNAYQAIHSGQCPAAIVGGINVLLKPNTSVQFLRLGMLSPEGTCKAFDTAGNGYCRSEGVVAVLLTKK 238 (965)
T ss_dssp EECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCCHHHHHHHHHHTCBCTTCCCCTTBTTCCSBCBBCEEEEEEEEEG
T ss_pred ecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhccCcCCCCccccchhccCCccccceEEEEEEecH
Confidence 4876544 78899999999999976421 1111111 01123357889999999999986
Q ss_pred CCCCCCCCeeEEeccCceecCCCcccccccccccceechhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHH----
Q 047978 165 PDINTERPLFHIVPTAQTILPDSEDAIKGHFRESPLIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQ---- 240 (320)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~---- 240 (320)
+... +..-.+.+.+......... ....++ .....++++++++++|++++|| .++-.|-.+..+-|.
T Consensus 239 ~~A~--~i~a~I~g~~~n~dg~~~~---~~t~P~---~~~q~~~i~~Al~~Agl~p~dI--dyvEaHgTgT~~gD~~E~~ 308 (965)
T 3hhd_A 239 SLAR--RVYATILNAGTNTDGFKEQ---GVTFPS---GDIQEQLIRSLYQSAGVAPESF--EYIEAHGTGTKVGDPQELN 308 (965)
T ss_dssp GGCS--SCSEEEEEEEEEECCCCTT---CTTSCC---HHHHHHHHHHHHHHTTCCGGGE--EEEECCCCCCTTHHHHHHH
T ss_pred HHcC--cccEEEEeeeccCCCCCCC---CCcCCC---HHHHHHHHHHHHHHhCCCHHHh--ccccccCCCCCCCCHHHHH
Confidence 5531 1122333322111110000 001111 2445688999999999999986 389999776544333
Q ss_pred -HHHHcCCCcc-hhh-hhHHHHhccCCcccchHHHHHHHHHHhchhcCCCC-----------------------------
Q 047978 241 -IEGKLGLEKT-KLR-ETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKAT----------------------------- 288 (320)
Q Consensus 241 -~~~~lg~~~e-~~~-~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~----------------------------- 288 (320)
+.+.++-..+ .+. -+ +-.++||+.+|+=...|...+.... ++.+.
T Consensus 309 Al~~~f~~~~~~~~~vgs--~Ks~iGH~~~AaG~~~lik~~l~l~-~~~ipp~~~~~~~np~i~~~~~~~~~v~~~~~~~ 385 (965)
T 3hhd_A 309 GITRALCATRQEPLLIGS--TKSNMGHPEPASGLAALAKVLLSLE-HGLWAPNLHFHSPNPEIPALLDGRLQVVDQPLPV 385 (965)
T ss_dssp HHHHHHCSSCSSCEEEEC--THHHHCBCGGGHHHHHHHHHHHHHH-HTEECCCSSCCSBCTTCHHHHHTSEEECCSCEEC
T ss_pred HHHHHhcccCCCceeeec--cccccccchhhhhHHHHHHHHHHHh-cCCcCCccCCCCCCccCcccccCceeecCCCccC
Confidence 3455553222 121 12 3445799998886666655433210 03221
Q ss_pred CCCCCceEEEEeeccchhhhheeeeecc
Q 047978 289 TGEELEWGVLLGFEAGLTVEAIVLRSIP 316 (320)
Q Consensus 289 ~G~~~d~vll~~~G~G~~~~a~~l~~~~ 316 (320)
+. ++++.-+||.|.+-..++++-.|
T Consensus 386 ~~---~~a~v~sfG~gG~Nah~il~~~~ 410 (965)
T 3hhd_A 386 RG---GNVGINSFGFGGSNVHIILRPNT 410 (965)
T ss_dssp CS---CEEEEEEECTTSEEEEEEEEECC
T ss_pred CC---CeEEEecccCCCceEEEEeccCC
Confidence 11 35788899999988889988654
No 75
>4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis}
Probab=98.84 E-value=9.6e-09 Score=99.64 Aligned_cols=244 Identities=14% Similarity=0.075 Sum_probs=146.3
Q ss_pred cccchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCC-------------CCCCCHHHHHHHHcCCCcc-------hhhh
Q 047978 52 LVPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSG-------------VDMPGADYQLTKLLGLKPS-------VKRV 111 (320)
Q Consensus 52 ~~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~-------------~~~p~~a~~l~~~LGl~~~-------~c~~ 111 (320)
.+.++.||+.+|++++|+++|+++++||.+|.+.+.. ...+.....++.+||+++. .|++
T Consensus 38 ~~~s~~dL~a~Ai~~AL~dAGl~p~~Vd~vI~g~~~~~~~~~~~~~~~~~g~~~~~~~~va~~lGl~~~~~~~~~~~caS 117 (520)
T 4egv_A 38 RGMSSVELATEAAKAALHDCGADADTVARAIDTVAGTRQFEISGPASAPLGVSSNYPRSVARNIGADPAHAVLEVIGGQS 117 (520)
T ss_dssp -CCCHHHHHHHHHHHHHHHTSSCHHHHHHHCCEEEECCC--------------CCHHHHHHHHHTCCCSEEEECCSSTTH
T ss_pred CCCCHHHHHHHHHHHHHHHhCcCHHHcceEEEEEeecccccccchhhhhhccccCHHHHHHHHcCCCCceEEEecCCCHH
Confidence 3578899999999999999999999988776543321 1234567889999999864 2544
Q ss_pred hhh--------hhcCCCCeEEEEEeeccccc-cc----------------------------------------------
Q 047978 112 MLT--------AESNAGARVLVVCSEITVGT-FR---------------------------------------------- 136 (320)
Q Consensus 112 ~l~--------l~~~~~~~~LVv~~e~~s~~-~~---------------------------------------------- 136 (320)
.+. |++|..+.+|+.+.|..|.. +.
T Consensus 118 g~~av~~AA~aI~aG~advvlAgG~EsMS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~~~~~~~~~~ 197 (520)
T 4egv_A 118 PQHLATEFGGKIAAGENDVVLIFGSENTSTLRHFSKAENKPDHSETVDGQLEDRGYGYDGIFDEYTIRHGLIGAPVQYGL 197 (520)
T ss_dssp HHHHHHHHHHHHHTTSCSEEEEEEEECCC----------------------------------CTTGGGTCCSHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEEEEeccccccccccccccCccccccccccccccccchhHHHHHHHhCCCcHHHHHHH
Confidence 322 78899999999999987631 00
Q ss_pred ---------------------------------CCCC-----CCchh-----------------hhhhhhhccCceEEEE
Q 047978 137 ---------------------------------APSD-----ENLSC-----------------LVNRAIVGDGTAALIV 161 (320)
Q Consensus 137 ---------------------------------~~~~-----~~~~~-----------------~~~~~~~GDgAaA~ll 161 (320)
+|.. .+.++ ..+.+-.+|||+|+||
T Consensus 198 ~~s~~~a~~g~~~~~f~~eia~v~v~~~~~a~~np~a~~r~~~t~E~l~~l~p~~r~i~~p~~ta~nas~isDGAAAvVL 277 (520)
T 4egv_A 198 LENARRARLGLSVADYRLAMAELFAPFSKVAAKNPYSSAPTERSVEELLTVTASNRMIVDPYPRLMVARDQVNQGAALLM 277 (520)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHCTTSSSCCCCCHHHHHSCCSSSCEEETTEEGGGCC--CCCEEEEEEE
T ss_pred HHHHHHHHHccccchhhhheeEEEEecccccccCccccccCCCCHHHhcccCcccccccCCcccccccCCCCcceEEEEE
Confidence 0000 00000 0123456899999999
Q ss_pred eecCCC---CCCCCeeEEeccCce-ecCCCcccccccccccceechhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhH
Q 047978 162 GACPDI---NTERPLFHIVPTAQT-ILPDSEDAIKGHFRESPLIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAV 237 (320)
Q Consensus 162 ~~~~~~---~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~g~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~ 237 (320)
.+.+.. ++ .+.-.+...+.. ..|.. + ...++-........+++.+|+++|++++|+ +++=+|-.....
T Consensus 278 ~S~e~A~~lGl-~p~a~I~~~a~a~~~~~~---~--~~~~~~~~~~~~~~a~~~al~~agl~~~di--d~~E~~dAF~~~ 349 (520)
T 4egv_A 278 MSVESARKLGV-PEEKWVYLRGHADMKEPK---L--LERADIGASPASVTAVNEALRVAGIGLDDV--AAFDLYSCFPFP 349 (520)
T ss_dssp EEHHHHHHHTC-CGGGCEEEEEEEEEECCC---G--GGCSCTTCCHHHHHHHHHHHHHHTCCGGGE--EEEEECCSSSHH
T ss_pred eeHHHHHHcCC-CCceEEEEEEEeccCCcc---c--ccccccccChHHHHHHHHHHHHhCCCHHHC--CEEEEeCCcHHH
Confidence 876542 21 121122221111 11110 0 000100113455678899999999999996 488889887777
Q ss_pred HHHHHHHcCCCcc---hhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCCCCCCceEEEEeeccchhhhheee
Q 047978 238 LDQIEGKLGLEKT---KLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEAIVL 312 (320)
Q Consensus 238 ~~~~~~~lg~~~e---~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~~l 312 (320)
...+.+.||++++ ++..+ --...+||..+++-...+..++.... -..| .+.|..+-| |+-|....+
T Consensus 350 ~l~~~~~lG~~~~~~~~~n~~-Gg~~~~Ghp~~a~g~~~~~~~v~~lr----~~~~---~~~L~~~~g-g~~~~~~~~ 418 (520)
T 4egv_A 350 VFNICDGTGLATDDPRGLTLT-GGLPFFGGLGNNYSMHGIAEAVNEMR----DKPG---QFALVGANG-GIASKYSVG 418 (520)
T ss_dssp HHHHHHHHCCCTTCTTCSCSS-CCHHHHCSCSSSHHHHHHHHHHHHHH----HSTT---CEEEEEEEE-TTTTEEEEE
T ss_pred HHHHHHHhCCCCCCCCCcCCC-cccccCCChHHHHHHHHHHHHHHHHh----cCCC---CceEEeCCC-CeeeeeeEE
Confidence 7788899998643 33221 02445899888887777777776522 1244 666665433 444443333
No 76
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=98.51 E-value=6.8e-07 Score=101.11 Aligned_cols=253 Identities=12% Similarity=0.046 Sum_probs=147.3
Q ss_pred chHHHHHHHHHHHHHHcCCCCCCcC--------EEEEEeeCC-C-----------------------CC-CCHHHHHHH-
Q 047978 55 KVPKLGKEAVSKAIKEWGQPISKIT--------HLISCSVSG-V-----------------------DM-PGADYQLTK- 100 (320)
Q Consensus 55 ~~~~la~~Aa~~aL~~ag~~~~dId--------~li~~s~t~-~-----------------------~~-p~~a~~l~~- 100 (320)
....|+.+|+.+||+++|+++++|+ .+++++... + .. ...++++..
T Consensus 2646 p~~rL~l~aa~eALedAGi~p~~l~~~~~~~~vGV~vG~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~is~~ 2725 (3089)
T 3zen_D 2646 RVALWNIVATVDAFLSSGFTPTELMRWVHPSQVASTQGTGMGGMTSMQTMYHGNLLGRAKPNDILQEVLPNVVAAHVMQS 2725 (3089)
T ss_dssp HHHHHHHHHHHHHHTTSCSCGGGHHHHSCGGGEEEEEEESSCCHHHHHHHHHHHHTTCCCCTTHHHHTSTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHhhcccCcceeEEEEeecCccHHHHHHHHHHHhcCCCccchhhccccccHHHHHHHHH
Confidence 5678999999999999999999885 466665431 0 11 224566665
Q ss_pred HcCCCcc------hhhhhhh--------hhcCCCCeEEEEEeecccccc--------------------cCCCCC--Cch
Q 047978 101 LLGLKPS------VKRVMLT--------AESNAGARVLVVCSEITVGTF--------------------RAPSDE--NLS 144 (320)
Q Consensus 101 ~LGl~~~------~c~~~l~--------l~~~~~~~~LVv~~e~~s~~~--------------------~~~~~~--~~~ 144 (320)
.+|+... .|++.++ |++|.++.+|+.++|..++.. .+|+.. ..+
T Consensus 2726 ~lGl~GPs~tV~tACSSsl~Al~~A~~~IrsG~~d~aLaGGve~ls~~~~~~f~~~~als~~~~~~~~~~sp~~~crpFd 2805 (3089)
T 3zen_D 2726 YVGGYGAMVHPVGACATAAVSVEEGVDKIKLGKADLVIAGGFDDLTLEAIIGFGDMAATADTEMMRAKGISDSKFSRAND 2805 (3089)
T ss_dssp TTCCCSCEECCBCTTCHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHHHHHHTCBCCHHHHHHTTCCTTTSCCSSB
T ss_pred HcCCCCCceeeccchhhHHHHHHHHHHHHHCCCCCeeEEeeecccCHHHHHHHHHhhhhhcchhhhhccCCcccccCccc
Confidence 4588643 4877654 788999999999999865310 001110 011
Q ss_pred hhhhhhhhccCceEEEEeecCCC-CCCCCeeEEeccCce-ecCCCcccccccccccc---e--echhHHHHHHHHhhhcC
Q 047978 145 CLVNRAIVGDGTAALIVGACPDI-NTERPLFHIVPTAQT-ILPDSEDAIKGHFRESP---L--IADNIDKFLAESFDQVS 217 (320)
Q Consensus 145 ~~~~~~~~GDgAaA~ll~~~~~~-~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~g---~--~~~~~~~~i~~~l~~~g 217 (320)
....++++||||+++||++.+.. ....+.+.++..... ..+.... +...+ + ....-.++++.+|+++|
T Consensus 2806 ~~~dG~v~GEGAgavVL~~~e~A~~~G~~I~avI~g~~~n~Dg~~~~-----~~aP~~g~~~a~~~~q~~ai~~AL~~AG 2880 (3089)
T 3zen_D 2806 RRRLGFLEAQGGGTILLARGDLALKMGLPVLAVVGYAQSFADGVHTS-----IPAPGLGALGAARGGRESTLARSLAQLG 2880 (3089)
T ss_dssp TTCCCBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEECCCCCCC-----SSCCCCGGGGGSTTGGGSHHHHHHHTTT
T ss_pred cCCCCEEEeccceEEEEeeHHHHHhCCCceEEEEEEEEEecCCcccC-----ccCCchhHHhHhhhhHHHHHHHHHHHcC
Confidence 12347889999999999976431 000111122221110 0011000 00000 0 01233467899999999
Q ss_pred CCCCCCCceEEEEcCCChhHHH--------HHHHHcCCCc-chhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCC
Q 047978 218 LNDHDWNSLFWMMHPIGPAVLD--------QIEGKLGLEK-TKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKAT 288 (320)
Q Consensus 218 ~~~~d~~~~~~i~h~~~~~~~~--------~~~~~lg~~~-e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~ 288 (320)
++++|| .++-.|-.+..+-| .+.+.+|.+. +++..+ ..-..+||+.+|+=...|..++.... ++.+.
T Consensus 2881 l~p~DI--dyVEaHGTGT~lgD~~E~~al~al~~~fg~~~~~~~~v~-s~Ks~iGH~~gAAG~~~lik~ll~L~-~g~iP 2956 (3089)
T 3zen_D 2881 VGADDI--AVISKHDTSTLANDPNETELHERIADSMGRAPGNPLFIV-SQKTLTGHAKGGAAVFQMMGLCQILR-DGVIP 2956 (3089)
T ss_dssp CCGGGE--EEEECCCCCCTTHHHHHHHHHHHHHHHTTCCTTCCEEEE-CSHHHHCBCSTTHHHHHHHHHHHHHH-HCCBC
T ss_pred CCHHHe--eEEEEecCCcccccHHHHHHHHHHHHHhCccCCCcceec-ccccccCCchhhhhHHHHHHHHHHHh-cCccC
Confidence 999986 38999987765433 3456677654 222211 13455799988875555444332211 04331
Q ss_pred C----------------------------CCCCceEEEEeeccchhhhheeeeecc
Q 047978 289 T----------------------------GEELEWGVLLGFEAGLTVEAIVLRSIP 316 (320)
Q Consensus 289 ~----------------------------G~~~d~vll~~~G~G~~~~a~~l~~~~ 316 (320)
| ..+..+++.-|||-|.+-+.++++-.|
T Consensus 2957 pt~~~~~~np~i~~~~~~~~~~~~~~w~~~~~~r~a~vnSfGfGG~NahvVle~~~ 3012 (3089)
T 3zen_D 2957 PNRSLDCVDDELATSGHFVWVREPLDLRGKFPLKAGLVTSLGFGHVSGLVALVHPE 3012 (3089)
T ss_dssp CCTTCSSBCGGGGGCSSEEECSSCBCCCTTSCCCEEEEEEEETTTEEEEEEEECGG
T ss_pred CCCCCCCCCCCccccCCeeecCCCccCCCCCCCCEEEEccccCCCCeEEEEEecCc
Confidence 1 001146888899999888888887655
No 77
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=97.47 E-value=0.0039 Score=70.66 Aligned_cols=244 Identities=14% Similarity=0.086 Sum_probs=150.1
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcC----EEEEEeeCC-C-----C-------------CCC-HHHHHHHHcCCCcc-----
Q 047978 57 PKLGKEAVSKAIKEWGQPISKIT----HLISCSVSG-V-----D-------------MPG-ADYQLTKLLGLKPS----- 107 (320)
Q Consensus 57 ~~la~~Aa~~aL~~ag~~~~dId----~li~~s~t~-~-----~-------------~p~-~a~~l~~~LGl~~~----- 107 (320)
.-|+.+++.+||+++|+++++++ .+++++++. | . .++ .+.+|...+|++..
T Consensus 79 ~rl~l~~~~eAle~Ag~~~~~~~~~~~gv~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~~~l~Gps~tv~ 158 (2512)
T 2vz8_A 79 LRMLLEVTYEAIVDGGINPASLRGTSTGVWVGVSSSDASEALSRDPETLVGYSMIGCQRAMMANRLSFFFDFKGPSITID 158 (2512)
T ss_dssp HHHHHHHHHHHHGGGTCCGGGGTTCSCEEEEEECCCHHHHHTTSCTTTSCGGGGGGTSTTHHHHHHHHHHTCCSCEEEEE
T ss_pred HHHHHHHHHHHHHHCCCChhhcCCCCeEEEEEeccHHHHHHHhcCccccCcceecccchhHHHHHHHHHhCCCCCceeec
Confidence 45799999999999999876543 355555433 2 0 111 57899999999864
Q ss_pred -hhhhhhh--------hhcCCCCeEEEEEeeccccc----------ccCCCCC--CchhhhhhhhhccCceEEEEeecCC
Q 047978 108 -VKRVMLT--------AESNAGARVLVVCSEITVGT----------FRAPSDE--NLSCLVNRAIVGDGTAALIVGACPD 166 (320)
Q Consensus 108 -~c~~~l~--------l~~~~~~~~LVv~~e~~s~~----------~~~~~~~--~~~~~~~~~~~GDgAaA~ll~~~~~ 166 (320)
.|++-+. |++|.++.+|+-+++..... ...|+.+ .-+....++..|+|++++||++-+.
T Consensus 159 tACsSsl~Al~~A~~~l~~g~~d~al~gG~~~~~~p~~~~~~~~~~~ls~~g~c~~Fd~~adG~~~gEG~~~~vLk~l~~ 238 (2512)
T 2vz8_A 159 TACSSSLLALQSAYQAIRGGECSAAVVGGLNVLLKPNSSLQFMKLGMLSQDGTCRSFDAEGTGYCRAEAVVAVLLTKKSL 238 (2512)
T ss_dssp CTTSTHHHHHHHHHHHHHTSSCSEEEEEEEECCCCHHHHHHHHHTTCBCTTCSCCSSSTTCCCBCBBCEEEEEEEEEGGG
T ss_pred cHhHHHHHHHHHHHHHHHcCCCCeeEEeEeccccCHHHHHHHccCCCCCCCCCCCCCCCCCCCcceeeeEEEEEEEEHHH
Confidence 4765433 78899999999999974211 1122111 0112235789999999999998765
Q ss_pred CCCCCCeeEEeccCceecCCCcccccccccccceechhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHH-----H
Q 047978 167 INTERPLFHIVPTAQTILPDSEDAIKGHFRESPLIADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQ-----I 241 (320)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~-----~ 241 (320)
.. +.+-.+.+.+......... ....++ .....++|+.+++++|++++|+ .++=.|-.+..+-|- +
T Consensus 239 A~--~i~a~i~g~~~n~dg~~~~---~~t~P~---~~~q~~~i~~al~~ag~~p~~i--~yveaHGTgT~~gD~~E~~al 308 (2512)
T 2vz8_A 239 AR--RVYATILNAGTNTDGSKEQ---GVTFPS---GDVQEQLIRSLYAPAGPDPESL--EYIEAHGTGTKVGDPQELNGI 308 (2512)
T ss_dssp CS--CCSEEEEEEEEEECCCCTT---CSSSCC---HHHHHHHHHTTSGGGSSCTTSC--CEEECCCCCCTTHHHHHHHHH
T ss_pred CC--cccEEEEEEEEcCCCCCCC---CCCCCC---HHHHHHHHHHHHHHcCCCHHHC--CEEEeecCCCCCCCHHHHHHH
Confidence 31 1122232221111000000 001122 2456688999999999999996 399999887666544 3
Q ss_pred HHHcCCCcc-hhh-hhHHHHhccCCcccchHHHHHHHHHHhchhcCCCC-----------------------------CC
Q 047978 242 EGKLGLEKT-KLR-ETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKAT-----------------------------TG 290 (320)
Q Consensus 242 ~~~lg~~~e-~~~-~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~-----------------------------~G 290 (320)
.+.++-.+. .+. -+ +=.++||+-+|+=...|...+-.. ++|.+. +.
T Consensus 309 ~~~f~~~~~~~~~igS--~Ks~iGH~~~AaG~~~~ik~~l~l-~~~~ipp~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 385 (2512)
T 2vz8_A 309 VNALCATRREPLLIGS--TKSNMGHPEPASGVAALIKVLLSL-EHGVWAPNLHYHTPNPEIPALQDGRLQVVDRPLPIRG 385 (2512)
T ss_dssp HHHHCSCSSSCCEEEC--HHHHHCBCGGGHHHHHHHHHHHHH-TTTBCCCCSSCCSCCTTSSSSSSSSCEECCSCCBCCS
T ss_pred HHHhcccCCCCceeec--ccccccccccccchhHHHHHHHHH-HCCCcCCCCCCCCCCccccccccCceEecCCCccCCC
Confidence 455663222 121 23 455689999888777776554321 113321 12
Q ss_pred CCCceEEEEeeccchhhhheeeeecc
Q 047978 291 EELEWGVLLGFEAGLTVEAIVLRSIP 316 (320)
Q Consensus 291 ~~~d~vll~~~G~G~~~~a~~l~~~~ 316 (320)
.+++.-+||.|.+-+.++++-.|
T Consensus 386 ---~~a~vnsfG~gG~Nah~il~~~~ 408 (2512)
T 2vz8_A 386 ---GNVGINSFGFGGSNVHVILQPNS 408 (2512)
T ss_dssp ---CCEEEEEEETTTEEEEEEEEECC
T ss_pred ---CeEEEeccCCCCceeEEEEccCC
Confidence 46788899999998889997654
No 78
>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*
Probab=96.53 E-value=0.019 Score=62.64 Aligned_cols=110 Identities=13% Similarity=-0.016 Sum_probs=70.8
Q ss_pred hHHHHHHHHHHHHHHcCCC-CCCc----C----EEEEEeeCC--------------------CCC----C-CHHHHHHHH
Q 047978 56 VPKLGKEAVSKAIKEWGQP-ISKI----T----HLISCSVSG--------------------VDM----P-GADYQLTKL 101 (320)
Q Consensus 56 ~~~la~~Aa~~aL~~ag~~-~~dI----d----~li~~s~t~--------------------~~~----p-~~a~~l~~~ 101 (320)
...|+..++.+||+++|++ |.++ + .+++++... +.. + ..+.+|...
T Consensus 1186 ~~~l~L~aa~eAL~~AGi~~p~e~~~~i~~s~vGv~vGsg~gg~~~~~~~~~~~~~~~~v~~~~~~~~~~n~~aa~vs~~ 1265 (1878)
T 2uv9_A 1186 VTLYVLVSVAEALLSSGITDPYEFYKYVHLSEVGNCIGSGVGGTSALRGMYKDRYLDKPVQKDILQESFVNTMAAWVNML 1265 (1878)
T ss_dssp HHHHHHHHHHHHHHTTTCSSGGGHHHHSCGGGEEEEEEESSCCHHHHHHHHTTTTTTCCCCSCTTGGGSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCChhhhhcccCccceEEEEccCCccHHHHHHHHHHHHhcCCCCchhhhcchHHHHHHHHHHH
Confidence 3458999999999999998 7662 2 344444321 111 1 246788884
Q ss_pred -cCCCcc------hhhhhhh--------hhcCCCCeEEEEEeeccccc----------cc----------CCCCCC--ch
Q 047978 102 -LGLKPS------VKRVMLT--------AESNAGARVLVVCSEITVGT----------FR----------APSDEN--LS 144 (320)
Q Consensus 102 -LGl~~~------~c~~~l~--------l~~~~~~~~LVv~~e~~s~~----------~~----------~~~~~~--~~ 144 (320)
||+... .|++.+. |++|.++.+||.+.|..+.. .. +|+... ..
T Consensus 1266 ~lg~~GP~~tv~tACASsl~Al~~A~~~I~sG~advalvGGvd~~~~~~~~~f~~m~als~~~de~a~g~~p~~~~RPfd 1345 (1878)
T 2uv9_A 1266 LLSSTGPIKTPVGACATAVESLDVGYDTIMQGKARVCLVGGFDDFQEEGSYEFANMGATSNAKEEFARGREPGEMSRPTS 1345 (1878)
T ss_dssp TCCCCCCBCCBCCGGGHHHHHHHHHHHHHTTTSCSEEEEEEEECCCHHHHHHHHHHTCBCCHHHHHTTTCCTTSSCCSSB
T ss_pred hcCCCCCeEEEcCcchHHHHHHHHHHHHHHcCCCCEEEEeeeccCChHHHHHHHHhhhhccchhhhhcCCCcccCcCCCc
Confidence 888653 3776443 78999999999999976421 00 021111 01
Q ss_pred hhhhhhhhccCceEEEEeecC
Q 047978 145 CLVNRAIVGDGTAALIVGACP 165 (320)
Q Consensus 145 ~~~~~~~~GDgAaA~ll~~~~ 165 (320)
....+++.||||+++||.+..
T Consensus 1346 ~~r~Gfv~gEGag~vVL~~~~ 1366 (1878)
T 2uv9_A 1346 TTRNGFMESQGCGVQVIMTAQ 1366 (1878)
T ss_dssp TTCCCBCBBCEEEEEEEEEHH
T ss_pred cCCCCCcccceeEEEEEeeHH
Confidence 122478899999999998854
No 79
>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*
Probab=96.03 E-value=0.022 Score=62.19 Aligned_cols=105 Identities=11% Similarity=0.021 Sum_probs=63.2
Q ss_pred HHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHHH--------HHHcCCCcch-hhh-hHHHHhccCCcccchHHHHHHH
Q 047978 207 KFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQI--------EGKLGLEKTK-LRE-TRHVLSEYGNMASATVLFVLDE 276 (320)
Q Consensus 207 ~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~--------~~~lg~~~e~-~~~-~~~~~~~~Gn~~sasi~~~L~~ 276 (320)
..++.+|+.+|++++|| .++=+|-.+..+-|.+ .+.++-++.+ +.. + .-...||+-+|+=...|..
T Consensus 1520 ~air~ALa~AGl~p~DI--d~veaHGTgT~~gD~~E~~Al~~~f~~~gr~~~~pl~v~s--~KsliGH~~gAAGa~~li~ 1595 (1887)
T 2uv8_A 1520 APLRGALATYGLTIDDL--GVASFHGTSTKANDKNESATINEMMKHLGRSEGNPVIGVF--QKFLTGHPKGAAGAWMMNG 1595 (1887)
T ss_dssp CHHHHHHHTTTCCGGGE--EEEECCCCSCHHHHHHHHHHHHHHHHHHTCCTTCCEEEEC--THHHHCBCGGGHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHc--eEEEecCCCCcccCHHHHHHHHHHHhhhccCCCCcEEEEe--cccceechHHHHhHHHHHH
Confidence 57889999999999985 3888998877554432 2233433221 111 1 1333699998886666665
Q ss_pred HHHhchhcCCCC--------------------CC-----CCCceEEEEeeccchhhhheeeeecc
Q 047978 277 MRKRSVEEGKAT--------------------TG-----EELEWGVLLGFEAGLTVEAIVLRSIP 316 (320)
Q Consensus 277 ~~~~~~~~g~l~--------------------~G-----~~~d~vll~~~G~G~~~~a~~l~~~~ 316 (320)
++.... .|.+. +. .+..++++-|||-|.+-+.++++-.|
T Consensus 1596 ~ll~L~-~g~iPpt~n~d~~dp~l~~~~~l~~~~~~~~~~~~r~a~v~SFGFGG~NahvIle~p~ 1659 (1887)
T 2uv8_A 1596 ALQILN-SGIIPGNRNADNVDKILEQFEYVLYPSKTLKTDGVRAVSITSFGFGQKGGQAIVVHPD 1659 (1887)
T ss_dssp HHHHHT-TCEECCCTTCSSBCGGGGGCTTEECCSSCEECSCCCEEEEEEEETTTEEEEEEEECTH
T ss_pred HHHHHH-hCCcCCcCCCCCCCCccccccccccccccccCCCCCEEEEccCCCCCccEEEEEecCC
Confidence 443210 02111 00 01256888899988888878777554
No 80
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Probab=95.53 E-value=0.0044 Score=65.96 Aligned_cols=108 Identities=13% Similarity=0.000 Sum_probs=69.8
Q ss_pred HHHHHHHHHHHHHHcCCC-CCC---------cCEEEEEeeCC-CC-----------------------CC-CHHHHHHH-
Q 047978 57 PKLGKEAVSKAIKEWGQP-ISK---------ITHLISCSVSG-VD-----------------------MP-GADYQLTK- 100 (320)
Q Consensus 57 ~~la~~Aa~~aL~~ag~~-~~d---------Id~li~~s~t~-~~-----------------------~p-~~a~~l~~- 100 (320)
..|+..|+.+||+++|++ |.+ ++ +++++..+ +. .+ ..+.+|..
T Consensus 1013 qrLaLeAa~EALedAGI~dP~ei~~~i~~s~vG-V~vGSg~Gg~~~l~~~~~~~~~~~~v~~~~l~~~~~nt~Aa~Vs~~ 1091 (1688)
T 2pff_A 1013 TLFVLVSVVEAFIASGITDPYEMYKYVHVSEVG-NCSGSGMGGVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNML 1091 (1688)
T ss_dssp TTHHHHHHHHHHTTTTCSSGGGGGGGTCCSCSC-CCCCCCSCCCSSHHHHHHSSSSCCCCCSTTHHHHCTHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHcCCCChHHhccccCCceEE-EEecccCCCHHHHHHHHHHHHhcCCCCcchhccccHHHHHHHHHHH
Confidence 568999999999999997 554 33 33444322 10 12 24567777
Q ss_pred HcCCCcc------hhhhhhh--------hhcCCCCeEEEEEeecccccc----c----------------CCCCCC--ch
Q 047978 101 LLGLKPS------VKRVMLT--------AESNAGARVLVVCSEITVGTF----R----------------APSDEN--LS 144 (320)
Q Consensus 101 ~LGl~~~------~c~~~l~--------l~~~~~~~~LVv~~e~~s~~~----~----------------~~~~~~--~~ 144 (320)
.||+... .|++.+. |++|.++.+||.++|..+... . +|+... .+
T Consensus 1092 ~LGl~GPs~TVdtACASSL~AL~lA~~aIrsGeaDvaLVGGvE~msp~~~~~Fa~mgaLS~~~~e~a~G~~Pd~~cRPFd 1171 (1688)
T 2pff_A 1092 LISSSGPIKTPVGACATSVESVDIGVETILSGKARICIVGGYDDFQEEGSFEFGNMKATSNTLEEFEHGRTPAEMSRPAT 1171 (1688)
T ss_dssp SCCCCCCCCCCCCTTTTTHHHHHHHHHHHHTTTCSCBCCCCCCCCCTTTTTTTTTTSCSCCTTTTTTSSCCSSSSCCSSS
T ss_pred HcCCcCCeEEecCCCchHHHHHHHHHHHHHCCCCCEEEEeeeccCCHHHHHHHHhccccccChhhhhcCCChhhccCcCc
Confidence 6888653 4877554 788999999999999864310 0 011110 01
Q ss_pred hhhhhhhhccCceEEEEeecC
Q 047978 145 CLVNRAIVGDGTAALIVGACP 165 (320)
Q Consensus 145 ~~~~~~~~GDgAaA~ll~~~~ 165 (320)
....++.+||||+++||++.+
T Consensus 1172 ~~rdGfv~GEGAGavVLesle 1192 (1688)
T 2pff_A 1172 TTRNGFMEAQGAGIQIIMQAD 1192 (1688)
T ss_dssp SSCCCCCCCSCCEEEEEECSH
T ss_pred cCCCCCccccceEEEEeCcHH
Confidence 112467899999999998754
No 81
>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A
Probab=92.40 E-value=0.13 Score=46.53 Aligned_cols=71 Identities=15% Similarity=0.151 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcch----hh--------------------h----
Q 047978 60 GKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPSV----KR--------------------V---- 111 (320)
Q Consensus 60 a~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~~----c~--------------------~---- 111 (320)
|++..++.|+++|++|+|+|+|+-.--. ..--.....+.+++|++..- |. .
T Consensus 209 A~~ti~~~l~d~g~~~~d~D~ivtgdL~-q~g~~il~~l~~~~g~~~~~~~~dcg~~iy~~~~~~~~ggsg~~csa~v~~ 287 (347)
T 3lma_A 209 AADTIKQHLEDLGRTPDDYDLILTGDLS-GVGSPILKDLLKEEGINVGTKHNDCGLMIYTPDQQVFAGGSGCACSAVVTF 287 (347)
T ss_dssp HHHHHHHHHHHHTCCGGGCSEEEEESCH-HHHHHHHHHHHHHTTCCCGGGEEEGGGTSSCC---------CCCCHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHcCEEecCChH-HHHHHHHHHHHHHcCCChhHCccccceEEecCCCcccCCCCccccHHHHHH
Confidence 3344499999999999999998742111 11112455677888887531 32 1
Q ss_pred -hhh--hhcCCCCeEEEEEeecc
Q 047978 112 -MLT--AESNAGARVLVVCSEIT 131 (320)
Q Consensus 112 -~l~--l~~~~~~~~LVv~~e~~ 131 (320)
.++ ++.+..++||+|+.-..
T Consensus 288 ~~~~~~~~~g~~~ril~~~tGal 310 (347)
T 3lma_A 288 AHIFKEIEAGRLNRVLVVATGAL 310 (347)
T ss_dssp HTHHHHHHTTSCSEEEEEEEEEC
T ss_pred HHHHHHHhcCcccEEEEEecccc
Confidence 111 77899999999985544
No 82
>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B*
Probab=82.49 E-value=1.2 Score=40.33 Aligned_cols=48 Identities=25% Similarity=0.289 Sum_probs=37.8
Q ss_pred chHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCC-CCCCCHHHHHHHHcCCCcc
Q 047978 55 KVPKLGKEAVSKAIKEWGQPISKITHLISCSVSG-VDMPGADYQLTKLLGLKPS 107 (320)
Q Consensus 55 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~-~~~p~~a~~l~~~LGl~~~ 107 (320)
.......++++++|+++|++++|||.+|+.+... . .- .++++||++..
T Consensus 235 ~~~~~~~~~i~~~L~~~gl~~~did~~v~~hq~~~~-~~----~~~~~lgl~~e 283 (357)
T 3s3l_A 235 RYIDLLVAAKTQALEDAGTAIEDIAHAVIPVSRRGT-GH----ELHDLLGLPDE 283 (357)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGCSEEECCSCCCCS-SC----CHHHHHTSCGG
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEecCcChHH-HH----HHHHHcCCCHH
Confidence 4456678899999999999999999998655554 3 33 37888999865
No 83
>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis}
Probab=79.05 E-value=2.1 Score=39.30 Aligned_cols=44 Identities=14% Similarity=0.096 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcc
Q 047978 60 GKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPS 107 (320)
Q Consensus 60 a~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~ 107 (320)
...|++++|+++|++|+|||++.+. ..+......+.+.||+...
T Consensus 294 ~~~a~~~al~~agl~~~dId~ve~~----d~fa~~~~~~~~~lg~~~~ 337 (394)
T 3ss6_A 294 PAPAIRKGLEKVDWSLEDADLLEIN----EAFAAQYLAVEKELDLDRE 337 (394)
T ss_dssp HHHHHHHHHHHHTCCGGGCSEEEEC----CSBHHHHHHHHHHHTCCGG
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEeC----CchHHHHHHHHHHhCCCCC
Confidence 4788999999999999999998732 1233456678888998764
No 84
>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae}
Probab=78.85 E-value=2.3 Score=37.95 Aligned_cols=46 Identities=11% Similarity=-0.007 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcc
Q 047978 58 KLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPS 107 (320)
Q Consensus 58 ~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~ 107 (320)
....++.+++|+++|++++|||.++.... .+..-..++++||++..
T Consensus 224 ~~~~~~i~~~l~~~gl~~~did~~v~Hq~----~~~i~~~~~~~lgl~~e 269 (323)
T 3il3_A 224 RELSNVVEETLLANNLDKKDLDWLVPHQA----NLRIITATAKKLEMDMS 269 (323)
T ss_dssp HHHHHHHHHHHHTTTCCTTTCCEEEECCS----CHHHHHHHHHHTTCCGG
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEcCC----CHHHHHHHHHHcCcCHH
Confidence 44567899999999999999998864332 22345688999999875
No 85
>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A*
Probab=78.33 E-value=1.9 Score=39.19 Aligned_cols=47 Identities=11% Similarity=0.085 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcc
Q 047978 57 PKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPS 107 (320)
Q Consensus 57 ~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~ 107 (320)
.....++.+++|+++|++++|||.++.... .+..-..++++||++..
T Consensus 253 ~~~~~~~i~~~L~~~gl~~~did~~v~Hq~----n~~i~~~~~~~lgl~~e 299 (359)
T 3h78_A 253 SQTLVRIAGEMLAAHELTLDDIDHVICHQP----NLRILDAVQEQLGIPQH 299 (359)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGCSEEEECCS----CHHHHHHHHHHHTCCGG
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHhCcCHH
Confidence 345568899999999999999998864332 22345778999999875
No 86
>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans}
Probab=78.30 E-value=1.9 Score=38.99 Aligned_cols=47 Identities=15% Similarity=0.056 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcc
Q 047978 57 PKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPS 107 (320)
Q Consensus 57 ~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~ 107 (320)
.....++.+++|+++|++++|||.++..... +..-..++++||++..
T Consensus 243 ~~~~~~~i~~~l~~~gl~~~did~~v~Hq~~----~~i~~~~~~~Lgl~~e 289 (354)
T 4efi_A 243 LNAVPKLVSRTLDIAGRDKDSYDAFLFHQAN----LFMLKHLAKKAGLPAE 289 (354)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCSEEEECCCC----HHHHHHHHHHTTCCGG
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEeCCCC----HHHHHHHHHHhCcCHH
Confidence 3556778899999999999999998754422 2234679999999875
No 87
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}
Probab=78.19 E-value=2 Score=38.37 Aligned_cols=46 Identities=15% Similarity=0.154 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcc
Q 047978 58 KLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPS 107 (320)
Q Consensus 58 ~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~ 107 (320)
+...++.+++|+++|++++|||.++... .. +..-..++++||++..
T Consensus 234 ~~~~~~i~~~l~~~gl~~~did~~~~Hq-~~---~~i~~~~~~~lgl~~~ 279 (333)
T 4dfe_A 234 NVLEKVAVEALEKANLSAEQIDWLIPHQ-AN---IRIMQSTCRKLGLPQE 279 (333)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCSEEEECC-SC---HHHHHHHHHHTTCCGG
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEcC-CC---HHHHHHHHHHhCCCHH
Confidence 4556789999999999999999886433 22 2245788999999875
No 88
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A
Probab=78.12 E-value=1.8 Score=38.50 Aligned_cols=47 Identities=17% Similarity=0.169 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcc
Q 047978 57 PKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPS 107 (320)
Q Consensus 57 ~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~ 107 (320)
.....++.+++|+++|++++|||+++...+.. ..-..+.+.||++..
T Consensus 231 ~~~~~~~i~~al~~agl~~~dId~~~~H~~~~----~~~~~~~~~lg~~~~ 277 (335)
T 1u6e_A 231 AFKMGDVGRRAMDAAGVRPDQIDVFVPHQANS----RINELLVKNLQLRPD 277 (335)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCCEEEECCSCH----HHHHHHHHHHTCCTT
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEECCCCH----HHHHHHHHHcCCCch
Confidence 34567889999999999999999886444222 223457889998754
No 89
>3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor}
Probab=77.78 E-value=4.9 Score=37.26 Aligned_cols=85 Identities=8% Similarity=-0.034 Sum_probs=51.4
Q ss_pred chhHHHHHHHHhhhcCCCCCCCCceEEEEcC----CChhHHHHHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHH
Q 047978 202 ADNIDKFLAESFDQVSLNDHDWNSLFWMMHP----IGPAVLDQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEM 277 (320)
Q Consensus 202 ~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~----~~~~~~~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~ 277 (320)
.+...++++++|+++|++++||+ .+|+-. ..+..-..+++.||++++....+ ..|.+.++-..+|..+
T Consensus 138 ~~La~~Aa~~AL~~agi~~~dId--~li~~t~t~~~~P~~a~~v~~~LGl~~~~~~~~------v~~~~Cagg~~AL~~A 209 (413)
T 3v7i_A 138 QAYGERAARGALQIAGLDVADVD--CLITSNSTTPALPGLDVALANRLPLRGDTMLLP------ATQWACVAGTRSLALA 209 (413)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCC--EEEEECCSSCCSSCHHHHHHHHTTCCTTCEEEE------ESSCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCcCHHHCC--EEEEEccCCCCcCHHHHHHHHHhCCCCCceEEE------eeCCccHHHHHHHHHH
Confidence 34556788899999999999974 444322 22345677899999987432222 2255666656666554
Q ss_pred HHhchhcCCCCCCCCCceEEEEee
Q 047978 278 RKRSVEEGKATTGEELEWGVLLGF 301 (320)
Q Consensus 278 ~~~~~~~g~l~~G~~~d~vll~~~ 301 (320)
..-... | +. +++|+++.
T Consensus 210 ~~~i~a-g---~~---~~vLvvg~ 226 (413)
T 3v7i_A 210 ADLVAA-D---PD---RVVLVVIS 226 (413)
T ss_dssp HHHHHH-C---TT---CEEEEEEE
T ss_pred HHHHhc-C---CC---CEEEEEEE
Confidence 332100 2 34 77777764
No 90
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A
Probab=77.72 E-value=1.9 Score=38.75 Aligned_cols=47 Identities=15% Similarity=0.275 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcc
Q 047978 57 PKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPS 107 (320)
Q Consensus 57 ~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~ 107 (320)
.....++.+++|+++|++++|||.++... .. +..-..++++||++..
T Consensus 245 ~~~~~~~i~~~l~~~gl~~~did~~v~Hq-~~---~~i~~~~~~~lgl~~e 291 (345)
T 3s21_A 245 IKLAQKTFVAAKQVLGWAVEELDQFVIHQ-VS---RPHTAAFVKSFGIDPA 291 (345)
T ss_dssp HHHHHHHHHHHHHHHCCCGGGCSEEEECC-SC---HHHHHHHHHHHTCCGG
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEeCC-CC---HHHHHHHHHHcCcCHH
Confidence 34566888999999999999999987533 22 2244678999999875
No 91
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}
Probab=77.57 E-value=2 Score=38.30 Aligned_cols=46 Identities=15% Similarity=0.198 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcc
Q 047978 58 KLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPS 107 (320)
Q Consensus 58 ~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~ 107 (320)
+...++.+++|+++|++++|||+++... +. ...-..++++||++..
T Consensus 224 ~~~~~~i~~aL~~agl~~~did~~~~H~-~~---~~~~d~~~~~lg~~~~ 269 (331)
T 2x3e_A 224 TQMSDSVRRVLDRVGWQASDLHHLVPHQ-AN---TRILAAVADQLDLPVE 269 (331)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCSEEEECC-CC---HHHHHHHHHHHTCCGG
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEcC-CC---HHHHHHHHHHcCCCHH
Confidence 4567889999999999999999886533 22 1123458899999754
No 92
>1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A
Probab=76.93 E-value=2.9 Score=38.44 Aligned_cols=44 Identities=18% Similarity=0.269 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcc
Q 047978 60 GKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPS 107 (320)
Q Consensus 60 a~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~ 107 (320)
...|++++|+++|++++|||++-.. ..+......+.+.||+...
T Consensus 297 ~~~a~~~al~~Agl~~~dId~ie~~----d~f~~~~l~~~~~lg~~~~ 340 (397)
T 1wl4_A 297 PIPAIKQAVTKAGWSLEDVDIFEIN----EAFAAVSAAIVKELGLNPE 340 (397)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEEC----CSBHHHHHHHHHHHTCCGG
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEe----cccHHHHHHHHHHcCCCCc
Confidence 4789999999999999999988732 1233334557888998653
No 93
>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ...
Probab=76.74 E-value=2.7 Score=38.48 Aligned_cols=44 Identities=23% Similarity=0.241 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcc
Q 047978 60 GKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPS 107 (320)
Q Consensus 60 a~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~ 107 (320)
...|++++|+++|++++|||++-.. ..+...+..+.+.||+.+.
T Consensus 292 ~~~a~~~al~~agl~~~dId~ie~~----d~f~~~~l~~~~~lg~~~~ 335 (392)
T 2vu1_A 292 PIPASRKALERAGWKIGDLDLVEAN----EAFAAQACAVNKDLGWDPS 335 (392)
T ss_dssp HHHHHHHHHHHHTCCGGGCSEEEEC----CSBHHHHHHHHHHHCCCGG
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEec----cccHHHHHHHHHHcCCCcc
Confidence 4689999999999999999988742 2233334446888998753
No 94
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A
Probab=76.43 E-value=2.2 Score=38.77 Aligned_cols=47 Identities=13% Similarity=0.029 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcc
Q 047978 57 PKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPS 107 (320)
Q Consensus 57 ~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~ 107 (320)
.....++.+++|+++|++++|||.++... . .+..-..++++||++..
T Consensus 265 ~~~~~~~i~~~L~~~gl~~~did~~v~Hq-~---n~~i~~~~~~~Lgl~~e 311 (365)
T 3gwa_A 265 LAEVPRAADRLLALAGEPRENIDCFVLHQ-A---NRFMLDALRKKMKIPEH 311 (365)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCSEEEECC-C---CHHHHHHHHHHHTCCGG
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEcC-C---CHHHHHHHHHHhCCCHH
Confidence 34556788999999999999999987433 2 22244778999999875
No 95
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=74.84 E-value=2.7 Score=36.80 Aligned_cols=46 Identities=11% Similarity=0.112 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcc
Q 047978 58 KLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPS 107 (320)
Q Consensus 58 ~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~ 107 (320)
+...++.+++|+++|++++|||.++...+... ....+.+.||++..
T Consensus 210 ~~~~~~i~~al~~agl~~~did~~~~H~~~~~----~~~~~~~~lg~~~~ 255 (309)
T 2ebd_A 210 RSMEEVCREVLEKAGVKPEEVSLVIPHQANVR----IINALAEKLNIPKE 255 (309)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCSEEEECCSCHH----HHHHHHHHTTCCGG
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHH----HHHHHHHHhCCCHH
Confidence 35678899999999999999998764332211 12357889998753
No 96
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A
Probab=74.42 E-value=2.8 Score=36.80 Aligned_cols=46 Identities=11% Similarity=0.125 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcc
Q 047978 58 KLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPS 107 (320)
Q Consensus 58 ~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~ 107 (320)
+-..++.+++|+++|++++|||.++...+.. ..-..+.+.||++..
T Consensus 212 ~~~~~~i~~al~~agl~~~did~~~~H~~~~----~~~d~~~~~lg~~~~ 257 (313)
T 1zow_A 212 RIMGDASTRVVEKANLTSDDIDLFIPHQANI----RIMESARERLGISKD 257 (313)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCSEEEECCSCH----HHHHHHHHHHTCCGG
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEcCCCH----HHHHHHHHHhCCCHH
Confidence 3567789999999999999999886443222 122347888998753
No 97
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=73.98 E-value=3.2 Score=36.60 Aligned_cols=45 Identities=13% Similarity=0.048 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcc
Q 047978 59 LGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPS 107 (320)
Q Consensus 59 la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~ 107 (320)
-..++.+++|+++|++++|||.++.. .+. ...-..+++.||++..
T Consensus 219 ~~~~~i~~aL~~agl~~~did~v~~H-~~~---~~~~d~i~~~lg~~~~ 263 (317)
T 1hnj_A 219 ELAHIVDETLAANNLDRSQLDWLVPH-QAN---LRIISATAKKLGMSMD 263 (317)
T ss_dssp HHHHHHHHHHHHTTCCGGGCCEEEEC-CSC---HHHHHHHHHHTTCCGG
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEc-CCC---HHHHHHHHHHcCCCHH
Confidence 45688999999999999999987643 333 1122358889999764
No 98
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2
Probab=73.20 E-value=2.7 Score=37.54 Aligned_cols=46 Identities=13% Similarity=0.082 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcc
Q 047978 58 KLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPS 107 (320)
Q Consensus 58 ~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~ 107 (320)
+-..++.+++|+++|++++|||+++.. .+. ...-..+.++||++..
T Consensus 231 ~~~~~~i~~aL~~agl~~~did~v~~H-~~~---~~~~d~i~~~lg~~~~ 276 (339)
T 1mzj_A 231 ADVVPAAREALEVAGLTVGDLVAFVPH-QAN---LRIIDVLVDRLGVPEH 276 (339)
T ss_dssp HHHHHHHHHHHHTTTCCGGGCSEEEEC-CSC---HHHHHHHHHHHTCCTT
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEC-CCC---HHHHHHHHHHhCCCcc
Confidence 456788999999999999999987643 332 0122358899999765
No 99
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A
Probab=72.63 E-value=2.8 Score=38.45 Aligned_cols=46 Identities=22% Similarity=0.184 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcc
Q 047978 58 KLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPS 107 (320)
Q Consensus 58 ~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~ 107 (320)
+-..++.+++|+++|++++|||+++. +.+. ...-..+.++||++..
T Consensus 287 ~~~~~~i~~aL~~agl~~~dId~~~~-H~~~---~~i~d~~~~~lgl~~~ 332 (393)
T 1ted_A 287 SGVAPVVTEMLWDNGLQISDIDLWAI-HPGG---PKIIEQSVRSLGISAE 332 (393)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCSCEEE-CCSC---HHHHHHHHHHHTCCGG
T ss_pred HHHHHHHHHHHHHcCCCHhHCCEEEE-CCCc---HHHHHHHHHHcCCCHH
Confidence 34567889999999999999998865 3322 1123568889999765
No 100
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=71.24 E-value=3.1 Score=36.74 Aligned_cols=46 Identities=17% Similarity=0.087 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcc
Q 047978 58 KLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPS 107 (320)
Q Consensus 58 ~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~ 107 (320)
+-..++.+++|+++|++++|||+++....... .-..+.+.||++..
T Consensus 220 ~~~~~~i~~al~~agl~~~did~~~~H~~~~~----~~d~~~~~lg~~~~ 265 (322)
T 1ub7_A 220 RVMNTATLEAIEKAGLTPEDIRLFVPHQANLR----IIDAARERLGLPWE 265 (322)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCSEEEECCSCHH----HHHHHHHTTTCCGG
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHH----HHHHHHHHcCCCHH
Confidence 45678899999999999999998764332211 12358888998754
No 101
>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665}
Probab=70.45 E-value=7.8 Score=34.63 Aligned_cols=82 Identities=12% Similarity=0.152 Sum_probs=49.5
Q ss_pred hhHHHHHHHHhhhcCCCCCCCCceEEEEc-----CCChhHHHHHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHH
Q 047978 203 DNIDKFLAESFDQVSLNDHDWNSLFWMMH-----PIGPAVLDQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEM 277 (320)
Q Consensus 203 ~~~~~~i~~~l~~~g~~~~d~~~~~~i~h-----~~~~~~~~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~ 277 (320)
..-.++.+++|+++|++++||+ .+|+- +..+..--.++++||+++.. .++ + |.+.++-..+|..+
T Consensus 64 ~la~~Aa~~aL~~ag~~~~dId--~li~~t~t~~~~~P~~a~~v~~~LGl~~~~-a~d---i----~~~C~g~~~aL~~A 133 (350)
T 4ewp_A 64 VMAVGAAREALERAGLQGSDLD--AVIVSTVTFPHATPSAAALVAHEIGATPAP-AYD---V----SAACAGYCYGVAQA 133 (350)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCS--EEEEECSCCSCSSSCHHHHHHHHTTCTTSC-EEE---E----ECGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCC--EEEEEeccCCCCCCchHHHHHHHhCCCCce-EEE---e----ecchhhHHHHHHHh
Confidence 3345778899999999999984 33332 23355667789999997543 232 2 33455555555544
Q ss_pred HHhchhcCCCCCCCCCceEEEEee
Q 047978 278 RKRSVEEGKATTGEELEWGVLLGF 301 (320)
Q Consensus 278 ~~~~~~~g~l~~G~~~d~vll~~~ 301 (320)
..- .+ ..+. +++|+++.
T Consensus 134 ~~~-i~---~g~~---~~~Lvv~~ 150 (350)
T 4ewp_A 134 DAL-VR---SGTA---RHVLVVGV 150 (350)
T ss_dssp HHH-HH---TTSC---SEEEEEEE
T ss_pred hhh-hh---CCCc---cceeEeee
Confidence 322 00 1233 77888763
No 102
>3euo_A Type III pentaketide synthase; alpha helix, acyltransferase, transferase; 1.75A {Neurospora crassa} PDB: 3eut_A* 3euq_A*
Probab=68.29 E-value=11 Score=34.21 Aligned_cols=68 Identities=10% Similarity=0.056 Sum_probs=43.1
Q ss_pred hhHHHHHHHHhhhcCCCCCCCCceEEEEcC----CChhHHHHHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHH
Q 047978 203 DNIDKFLAESFDQVSLNDHDWNSLFWMMHP----IGPAVLDQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMR 278 (320)
Q Consensus 203 ~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~----~~~~~~~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~ 278 (320)
+...++++++|+++|++++||+ .+|+-. ..+..-..++++||++..-...+ ..|.+.++-..+|..+.
T Consensus 83 ~La~~Aa~~aL~~ag~~~~dId--~li~~t~t~~~~p~~a~~v~~~LGl~~~~~~~~------v~~~~C~~~~~al~~A~ 154 (379)
T 3euo_A 83 PLAVEASRKAMAEARLVPAQIT--HMVSTTCTDSANPGYDHYVAKELGLSDRLEKVL------LHGIGASGGLAALRTAA 154 (379)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCC--EEEEECSSCCCSSCHHHHHHHHHTCCTTCEEEE------ECSCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCC--EEEEEecCCCCCCCHHHHHHHHcCCCCCeeEEE------eeCchhhHHHHHHHHHH
Confidence 4455778899999999999974 443322 23456677899999975431222 33455555555665544
No 103
>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2
Probab=66.45 E-value=3.9 Score=37.28 Aligned_cols=41 Identities=20% Similarity=0.198 Sum_probs=31.2
Q ss_pred HHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcc
Q 047978 63 AVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPS 107 (320)
Q Consensus 63 Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~ 107 (320)
+.+++|+++|++++|||+++...... ..-..+.++||++..
T Consensus 257 ~i~~aL~~agl~~~dId~v~~H~~~~----~i~d~~~~~lgl~~~ 297 (382)
T 1u0m_A 257 ALKELAGEHGWDASDLDFYIVHAGGP----RILDDLSTFLEVDPH 297 (382)
T ss_dssp HHHHHHHTTSCCSSCCSCCEEECSHH----HHHHHHHHHSCSCGG
T ss_pred HHHHHHHHcCCCHHHCCEEEECCCCH----HHHHHHHHHcCCCHH
Confidence 89999999999999999887543222 123458889999864
No 104
>3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A*
Probab=66.18 E-value=15 Score=32.51 Aligned_cols=83 Identities=16% Similarity=0.276 Sum_probs=48.3
Q ss_pred chhHHHHHHHHhhhcCCCCCCCCceEEEEcC-----CChhHHHHHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHH
Q 047978 202 ADNIDKFLAESFDQVSLNDHDWNSLFWMMHP-----IGPAVLDQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDE 276 (320)
Q Consensus 202 ~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~-----~~~~~~~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~ 276 (320)
.+...++++++|+++|++++||+ .+++-. ..+..-..+++.||++. ....+ . |.+.++-..+|..
T Consensus 53 ~~La~~Aa~~aL~~ag~~~~~Id--~li~~t~~~~~~~p~~a~~v~~~lGl~~-~~~~~------v-~~aC~s~~~al~~ 122 (321)
T 3il6_A 53 SDLCHQVAKQLLEKSGKQASEID--FILVATVTPDFNMPSVACQVQGAIGATE-AFAFD------I-SAACSGFVYALSM 122 (321)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCC--EEEEECSSCSCSSSCHHHHHHHHTTCTT-CEEEE------E-CCGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC--EEEEEeCCCCcCCCcHHHHHHHHcCCCC-ceEEE------e-CcccHHHHHHHHH
Confidence 34556788899999999999974 333322 23455678899999975 22222 2 2444445555554
Q ss_pred HHHhchhcCCCCCCCCCceEEEEee
Q 047978 277 MRKRSVEEGKATTGEELEWGVLLGF 301 (320)
Q Consensus 277 ~~~~~~~~g~l~~G~~~d~vll~~~ 301 (320)
+..- ++.|.. +++|+++.
T Consensus 123 A~~~------i~~g~~-~~vLvvg~ 140 (321)
T 3il6_A 123 AEKL------VLSGRY-QTGLVIGG 140 (321)
T ss_dssp HHHH------HHTSSC-CCEEEEEE
T ss_pred HHHH------HHCCCC-CEEEEEEE
Confidence 4332 222211 67777653
No 105
>3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium}
Probab=65.72 E-value=3.7 Score=37.94 Aligned_cols=44 Identities=16% Similarity=0.152 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcc
Q 047978 60 GKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPS 107 (320)
Q Consensus 60 a~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~ 107 (320)
...|++++|+++|++++|||++-..-+ +........+.||+...
T Consensus 307 ~~~a~~~al~~Agl~~~dId~~e~hda----f~~~~l~~~~~lg~~~~ 350 (407)
T 3svk_A 307 PTPATRKVLDRAGLTIDDIDLFELNEA----FASVVLKFQKDLNIPDE 350 (407)
T ss_dssp HHHHHHHHHHHHTCCGGGCSEEEECCS----BHHHHHHHHHHHTCCGG
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEeCh----hHHHHHHHHHHhCCCCC
Confidence 368999999999999999998864321 22234456788998764
No 106
>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile}
Probab=65.12 E-value=17 Score=33.03 Aligned_cols=85 Identities=19% Similarity=0.137 Sum_probs=51.2
Q ss_pred chhHHHHHHHHhhhcCCCCCCCCceEEEEcC----CChhHHHHHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHH
Q 047978 202 ADNIDKFLAESFDQVSLNDHDWNSLFWMMHP----IGPAVLDQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEM 277 (320)
Q Consensus 202 ~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~----~~~~~~~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~ 277 (320)
.+...++++++|+++|++++||+. .++... ....+-..++..+|++......+ =|.+.++-+.+|..+
T Consensus 30 ~~L~~~a~~~Al~~agi~~~~Id~-v~~g~~~~~~~~~~~a~~~~~~lGl~~~~p~~~-------v~~~Css~~~al~~A 101 (395)
T 4e1l_A 30 VQLGTIAVKEAISRVGLNLSEIDE-VIIGNVLQTGLGQNVARQIAINAGIPNSVPSYT-------VNKLCGSGLKSVQLA 101 (395)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGCCE-EEEECCCCSSTTCCHHHHHHHHTTCCTTSCEEE-------ECCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCE-EEEEeccCCCCcchHHHHHHHHcCCCCCceEEE-------ccccchHHHHHHHHH
Confidence 355678889999999999999852 222221 12345677888999975443322 244555555566555
Q ss_pred HHhchhcCCCCCCCCCceEEEEee
Q 047978 278 RKRSVEEGKATTGEELEWGVLLGF 301 (320)
Q Consensus 278 ~~~~~~~g~l~~G~~~d~vll~~~ 301 (320)
... ++.|.- |.+|..+.
T Consensus 102 ~~~------I~~G~~-~~vlv~g~ 118 (395)
T 4e1l_A 102 AQS------ITSGEN-DVVIAGGT 118 (395)
T ss_dssp HHH------HHTTSC-SEEEEEEE
T ss_pred HHH------HhCCCC-CEEEEEEE
Confidence 443 333421 67776654
No 107
>4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis}
Probab=64.20 E-value=4.5 Score=38.73 Aligned_cols=44 Identities=18% Similarity=0.204 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCc
Q 047978 59 LGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKP 106 (320)
Q Consensus 59 la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~ 106 (320)
-...|++++|+++|++++|||++=... .+|.......+.||+..
T Consensus 318 ~~~~a~~~al~~agl~~~did~~E~~d----AF~~~~l~~~~~lG~~~ 361 (520)
T 4egv_A 318 ASVTAVNEALRVAGIGLDDVAAFDLYS----CFPFPVFNICDGTGLAT 361 (520)
T ss_dssp HHHHHHHHHHHHHTCCGGGEEEEEECC----SSSHHHHHHHHHHCCCT
T ss_pred HHHHHHHHHHHHhCCCHHHCCEEEEeC----CcHHHHHHHHHHhCCCC
Confidence 356799999999999999999876543 46677788889999954
No 108
>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum}
Probab=63.92 E-value=19 Score=32.33 Aligned_cols=84 Identities=17% Similarity=0.088 Sum_probs=48.0
Q ss_pred hhHHHHHHHHhhhcCCCCCCCCceEEE-EcC---CChhHHHHHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHH
Q 047978 203 DNIDKFLAESFDQVSLNDHDWNSLFWM-MHP---IGPAVLDQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMR 278 (320)
Q Consensus 203 ~~~~~~i~~~l~~~g~~~~d~~~~~~i-~h~---~~~~~~~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~ 278 (320)
+...++++++|+++|++++|++ .++ ... ..+..-..++..||++......+ ..+.+.++-..+|..+.
T Consensus 97 ~la~~Aa~~al~~ag~~~~~id--~vi~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~------v~~~aCss~~~al~~A~ 168 (374)
T 2h84_A 97 DLAQQACLRALKDWGGDKGDIT--HIVSVTSTGIIIPDVNFKLIDLLGLNKDVERVS------LNLMGCLAGLSSLRTAA 168 (374)
T ss_dssp HHHHHHHHHHHHHHCSCGGGCC--EEEEEESSCCCSSCHHHHHHHHHTCCTTCEEEE------EESCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCC--EEEEEeeCCCCCCcHHHHHHHHcCcCCCCceEE------ecCCcCHHHHHHHHHHH
Confidence 4455778889999999999874 333 222 22345567889999975322222 22234455555555554
Q ss_pred HhchhcCCCCCCCCCceEEEEee
Q 047978 279 KRSVEEGKATTGEELEWGVLLGF 301 (320)
Q Consensus 279 ~~~~~~g~l~~G~~~d~vll~~~ 301 (320)
.. ++.|.. +++|+++.
T Consensus 169 ~~------i~~g~~-~~vLv~g~ 184 (374)
T 2h84_A 169 SL------AKASPR-NRILVVCT 184 (374)
T ss_dssp HH------HTTCTT-CEEEEEEE
T ss_pred HH------HHcCCC-CEEEEEEE
Confidence 33 333321 67776653
No 109
>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile}
Probab=63.20 E-value=17 Score=33.11 Aligned_cols=84 Identities=13% Similarity=0.108 Sum_probs=50.4
Q ss_pred chhHHHHHHHHhhhcCCCCCCCCceEEEEcC-----CChhHHHHHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHH
Q 047978 202 ADNIDKFLAESFDQVSLNDHDWNSLFWMMHP-----IGPAVLDQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDE 276 (320)
Q Consensus 202 ~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~-----~~~~~~~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~ 276 (320)
.+...++++++|+++|++++||+ .+++-+ ..+.+-..+...+|+++.....+ + |.+.++-+.+|..
T Consensus 32 ~~L~~~A~~~AL~~agl~~~dId--~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~p~~~---v----~~aCss~~~al~~ 102 (396)
T 4dd5_A 32 VELGVTAAKEAIKRANITPDMID--ESLLGGVLTAGLGQNIARQIALGAGIPVEKPAMT---I----NIVCGSGLRSVSM 102 (396)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGCC--EEEEECSCCTTSCSCHHHHHHHHTTCCTTSCEEE---E----CCGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC--EEEEEeecCCCCCchHHHHHHHHcCCCCCceEEE---e----ccccHHHHHHHHH
Confidence 45567888999999999999984 333322 22446677889999975443332 1 3444555555555
Q ss_pred HHHhchhcCCCCCCCCCceEEEEee
Q 047978 277 MRKRSVEEGKATTGEELEWGVLLGF 301 (320)
Q Consensus 277 ~~~~~~~~g~l~~G~~~d~vll~~~ 301 (320)
+... ++.|.- |.+|..+.
T Consensus 103 A~~~------I~~G~~-~~vLv~g~ 120 (396)
T 4dd5_A 103 ASQL------IALGDA-DIMLVGGA 120 (396)
T ss_dssp HHHH------HHHTSC-SEEEEEEE
T ss_pred HHHH------HhcCCC-CEEEEEEE
Confidence 5443 222311 67777654
No 110
>3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa}
Probab=62.69 E-value=16 Score=34.30 Aligned_cols=68 Identities=10% Similarity=0.051 Sum_probs=43.3
Q ss_pred hhHHHHHHHHhhhcCCCCCCCCceEEEEcC----CChhHHHHHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHH
Q 047978 203 DNIDKFLAESFDQVSLNDHDWNSLFWMMHP----IGPAVLDQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMR 278 (320)
Q Consensus 203 ~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~----~~~~~~~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~ 278 (320)
+...++++++|+++|++++||+ .+|+-. ..+..-..++++||++..-...+ ..|.+.++-..+|..+.
T Consensus 112 ~La~~Aa~~AL~~agi~~~dId--~li~~t~t~~~~P~~a~~v~~~LGl~~~~~~~d------v~~~~Csgg~~AL~~A~ 183 (465)
T 3e1h_A 112 PLAVEASRKAMAEARLVPAQIT--HMVSTTCTDSANPGYDHYVAKELGLSDRLEKVL------LHGIGCSGGLAALRTAA 183 (465)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCC--EEEEECSSCCCSSCHHHHHHHHHTCCTTCEEEE------ECSCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCC--EEEEEeeCCCCCCcHHHHHHHHhCCCCCeeEEE------ecCCcchHHHHHHHHHH
Confidence 4455778899999999999984 443322 23456678899999975431222 34455555555665543
No 111
>3awk_A Chalcone synthase-like polyketide synthase; type III polyketide synthase, transferase; 2.00A {Huperzia serrata} PDB: 3awj_A
Probab=62.47 E-value=18 Score=33.11 Aligned_cols=85 Identities=13% Similarity=-0.038 Sum_probs=48.5
Q ss_pred hhHHHHHHHHhhhcCCCCCCCCceEEEEcC---CChhHHHHHHHHcCCCcchh-hhhHHHHhccCCcccchHHHHHHHHH
Q 047978 203 DNIDKFLAESFDQVSLNDHDWNSLFWMMHP---IGPAVLDQIEGKLGLEKTKL-RETRHVLSEYGNMASATVLFVLDEMR 278 (320)
Q Consensus 203 ~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~---~~~~~~~~~~~~lg~~~e~~-~~~~~~~~~~Gn~~sasi~~~L~~~~ 278 (320)
+...++++++|+++|++++||+ ..++.+. ..+..-..+++.||++..-- ..+ -|.+.++-..+|..+.
T Consensus 117 ~La~~Aa~~aL~~agl~~~~Id-~vi~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~~-------v~~aC~s~~~al~~A~ 188 (402)
T 3awk_A 117 KLAKEAAISAIKQWGQPKSKIT-HLVFATTSGVDMPGADFQLAKLLGLRPTVKRVML-------YQQGAYAGATVLRVAK 188 (402)
T ss_dssp HHHHHHHHHHHHHHCSCGGGCC-EEEEEECSCCCSSCHHHHHHHHHTCCTTCEEEEE-------ESCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCC-EEEEEEeCCCcCChHHHHHHHHcCCCCccceeeE-------ECCccHHHHHHHHHHH
Confidence 4455777889999999999874 2222222 23445678899999975421 121 2344455555555443
Q ss_pred HhchhcCCCCCCCCCceEEEEeec
Q 047978 279 KRSVEEGKATTGEELEWGVLLGFE 302 (320)
Q Consensus 279 ~~~~~~g~l~~G~~~d~vll~~~G 302 (320)
.. ++.|.. +++|+++.-
T Consensus 189 ~~------i~sg~~-~~vLvvg~E 205 (402)
T 3awk_A 189 DL------AENNKG-ARVLVACSE 205 (402)
T ss_dssp HH------HHTSTT-CEEEEEEEE
T ss_pred HH------HHcCCC-CEEEEEEEe
Confidence 32 222211 677777644
No 112
>3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A
Probab=61.38 E-value=1.9 Score=40.06 Aligned_cols=48 Identities=13% Similarity=0.124 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEE-eeCCCCCCCHHHHHHHHcCCC
Q 047978 58 KLGKEAVSKAIKEWGQPISKITHLISC-SVSGVDMPGADYQLTKLLGLK 105 (320)
Q Consensus 58 ~la~~Aa~~aL~~ag~~~~dId~li~~-s~t~~~~p~~a~~l~~~LGl~ 105 (320)
.-..+|++++|+++|++|+|||+|... |.|+...+.....+.+.+|..
T Consensus 292 ~~~~~ai~~al~~Agl~~~dId~ve~HgtgT~~~d~~e~~a~~~~~g~~ 340 (427)
T 3ho9_A 292 AGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVKTIFGEA 340 (427)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHHcCCCHHHccEEEecCCcCCCcCHHHHHHHHHHhccc
Confidence 456789999999999999999988633 333333444566677777754
No 113
>3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium}
Probab=60.97 E-value=24 Score=32.04 Aligned_cols=85 Identities=12% Similarity=0.088 Sum_probs=49.9
Q ss_pred chhHHHHHHHHhhhc-CCCCCCCCceEEEEcC-C----ChhHHHHHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHH
Q 047978 202 ADNIDKFLAESFDQV-SLNDHDWNSLFWMMHP-I----GPAVLDQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLD 275 (320)
Q Consensus 202 ~~~~~~~i~~~l~~~-g~~~~d~~~~~~i~h~-~----~~~~~~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~ 275 (320)
.+...++++++|+++ |++++||+. .++... + ...+-..++..+|+|......+ =|...+|-+.+|.
T Consensus 28 ~~L~~~a~~~Al~~a~gi~~~~Id~-v~~g~~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~-------v~~aCss~l~Al~ 99 (387)
T 3goa_A 28 EDLSAHLMRSLLARNPSLTAATLDD-IYWGCVQQTLEQGFNIARNAALLAEIPHSVPAVT-------VNRLCGSSMQALH 99 (387)
T ss_dssp HHHHHHHHHHHHHHCTTSCGGGCCE-EEEECSCCSBTTTTTHHHHHHHHTTCCTTSCCEE-------EECGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCCCHHHcCE-EEEEcccCCcccccHHHHHHHHHcCCCCCCcEeE-------ecCcchHHHHHHH
Confidence 355678889999999 999999852 222221 1 2345567788899974433222 2344445555665
Q ss_pred HHHHhchhcCCCCCCCCCceEEEEee
Q 047978 276 EMRKRSVEEGKATTGEELEWGVLLGF 301 (320)
Q Consensus 276 ~~~~~~~~~g~l~~G~~~d~vll~~~ 301 (320)
.+... ++.|.- |.+|..+.
T Consensus 100 ~A~~~------I~sG~~-d~vLv~G~ 118 (387)
T 3goa_A 100 DAARM------IMTGDA-QVCLVGGV 118 (387)
T ss_dssp HHHHH------HHTTSC-SEEEEEEE
T ss_pred HHHHH------HhCCCC-CEEEEEEE
Confidence 55443 333421 66776654
No 114
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=60.97 E-value=5.8 Score=36.14 Aligned_cols=54 Identities=15% Similarity=0.139 Sum_probs=40.9
Q ss_pred ccchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCC--------CHHHHHHHHcCCCc
Q 047978 53 VPKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMP--------GADYQLTKLLGLKP 106 (320)
Q Consensus 53 ~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p--------~~a~~l~~~LGl~~ 106 (320)
+.....+-.+|++++|+++++++++||+|=+...|-++.| +....|+++.|++-
T Consensus 63 ~~~lg~~~a~av~~~l~~~~~~~~~Id~IGsHGQTv~H~P~~~~TlQiGd~~~iA~~Tgi~v 124 (371)
T 3qbx_A 63 EQRWVALAAQGVRELLLQQQMSPDEVRAIGSHGQTIRHEPARHFTVQIGNPALLAELTGIDV 124 (371)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCGGGCCEEEECCEEEEEEGGGTEEEEECCHHHHHHHHSSCE
T ss_pred HHHHHHHHHHHHHHHHHHcCCCcccccEEEeCCccCccCCCCCCeeecCCHHHHHHHHCcCE
Confidence 3344566789999999999999999998755544545555 56788999999873
No 115
>2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A*
Probab=58.93 E-value=5.1 Score=36.67 Aligned_cols=44 Identities=18% Similarity=0.098 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcc
Q 047978 60 GKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPS 107 (320)
Q Consensus 60 a~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~ 107 (320)
...|++++|+++|++++|||++-.. +.+...+-...+.||+.+.
T Consensus 297 ~~~a~~~al~~Agl~~~dId~ie~~----D~f~~~~l~~~e~lg~~~~ 340 (395)
T 2ib8_A 297 PVYAASMVLKDVGLKKEDIAMWEVN----EAFSLVVLANIKMLEIDPQ 340 (395)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEEEEC----CSBHHHHHHHHHHHTCCGG
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEEc----cccHHHHHHHHHHcCCCcc
Confidence 4689999999999999999988632 2233333344455898653
No 116
>3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A
Probab=57.83 E-value=18 Score=32.92 Aligned_cols=83 Identities=10% Similarity=-0.031 Sum_probs=48.4
Q ss_pred hhHHHHHHHHhhhcCCCCCCCCceEEEE-cC---CChhHHHHHHHHcCCCcchh-hhhHHHHhccCCcccchHHHHHHHH
Q 047978 203 DNIDKFLAESFDQVSLNDHDWNSLFWMM-HP---IGPAVLDQIEGKLGLEKTKL-RETRHVLSEYGNMASATVLFVLDEM 277 (320)
Q Consensus 203 ~~~~~~i~~~l~~~g~~~~d~~~~~~i~-h~---~~~~~~~~~~~~lg~~~e~~-~~~~~~~~~~Gn~~sasi~~~L~~~ 277 (320)
+...++++++|+++|++++||+ .+|+ +. ..+..-..+++.||++..-. ..+ -|.+.++-..+|..+
T Consensus 98 ~La~~Aa~~AL~~ag~~~~dId--~li~~t~t~~~~p~~a~~v~~~LGl~~~~~~~~~-------~~~~C~~~~~al~~A 168 (387)
T 3oit_A 98 ELAAEAAKKAIAEWGRPAADIT--HLVVTTNSGAHVPGVDFRLVPLLGLRPSVRRTML-------HLNGCFAGCAALRLA 168 (387)
T ss_dssp HHHHHHHHHHHHHHTSCGGGCC--EEEEEESSCCEESCHHHHHHHHHTCCTTCEEEEE-------ECCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCC--EEEEEeeCCCCcccHHHHHHHHhCCCCCcceeeE-------ECchhHHHHHHHHHH
Confidence 3445777889999999999984 3332 22 12345577889999986431 122 244555555555554
Q ss_pred HHhchhcCCCCCCCCCceEEEEee
Q 047978 278 RKRSVEEGKATTGEELEWGVLLGF 301 (320)
Q Consensus 278 ~~~~~~~g~l~~G~~~d~vll~~~ 301 (320)
..- ++.|.. +++|+++.
T Consensus 169 ~~~------i~sg~~-~~vLvvg~ 185 (387)
T 3oit_A 169 KDL------AENSRG-ARVLVVAA 185 (387)
T ss_dssp HHH------HHSSTT-CEEEEEEE
T ss_pred HHH------HhcCCC-CEEEEEEE
Confidence 332 222221 77777653
No 117
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}
Probab=57.72 E-value=7.1 Score=40.18 Aligned_cols=46 Identities=15% Similarity=0.134 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCcc
Q 047978 58 KLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKPS 107 (320)
Q Consensus 58 ~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~~ 107 (320)
....++.+++|+++|++++|||.++. +... ...-..++++||++..
T Consensus 864 ~~~~~~~~~al~~agl~~~did~~~~-Hq~~---~~i~~~~~~~lgl~~~ 909 (979)
T 3tsy_A 864 ENVEKCLTQAFDPLGISDWNSLFWIA-HPGG---PAILDAVEAKLNLDKK 909 (979)
T ss_dssp HHHHHHHHHHHGGGTCCCGGGSEEEE-CCSC---HHHHHHHHHHHTCCTT
T ss_pred HHHHHHHHHHHhhcCCCCcccceEEE-CCCC---hHHHHHHHHHcCCChH
Confidence 44678899999999999999998753 3222 2234678899999875
No 118
>3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A
Probab=57.38 E-value=20 Score=32.75 Aligned_cols=80 Identities=11% Similarity=0.034 Sum_probs=47.9
Q ss_pred hhHHHHHHHHhhhcCCCCCCCCceEEEE-c---CCChhHHHHHHHHcCCCcchh-hhhHHHHhccCCcccchHHHHHHHH
Q 047978 203 DNIDKFLAESFDQVSLNDHDWNSLFWMM-H---PIGPAVLDQIEGKLGLEKTKL-RETRHVLSEYGNMASATVLFVLDEM 277 (320)
Q Consensus 203 ~~~~~~i~~~l~~~g~~~~d~~~~~~i~-h---~~~~~~~~~~~~~lg~~~e~~-~~~~~~~~~~Gn~~sasi~~~L~~~ 277 (320)
+...++++++|+++|++++||+ .+|+ + +..+..-..+++.||++..-. ..+ + +.+.++-..+|..+
T Consensus 104 ~La~~Aa~~aL~~ag~~~~dId--~vi~~t~t~~~~p~~a~~v~~~LGl~~~~~~~~~------v-~~~C~g~~~al~~A 174 (393)
T 3ov2_A 104 RLAKEAAEKAIKEWGRPKSEIT--HLVFCSISGIDMPGADYRLATLLGLPLTVNRLMI------Y-SQACHMGAAMLRIA 174 (393)
T ss_dssp HHHHHHHHHHHHHHTSCGGGCC--EEEEEESSCCCBSCHHHHHHHHHTCCTTSEEEEE------E-SCCTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCC--EEEEEEeCCCCCCCHHHHHHHHcCCCCCcceeeE------E-cCccHHHHHHHHHH
Confidence 4455778889999999999984 3332 2 123445677899999986531 222 1 34444455555444
Q ss_pred ---HHhchhcCCCCCCCCCceEEEEee
Q 047978 278 ---RKRSVEEGKATTGEELEWGVLLGF 301 (320)
Q Consensus 278 ---~~~~~~~g~l~~G~~~d~vll~~~ 301 (320)
++. | +. +++|+++.
T Consensus 175 ~~~i~s----g---~~---~~vLvvg~ 191 (393)
T 3ov2_A 175 KDLAEN----N---RG---ARVLVVAC 191 (393)
T ss_dssp HHHHHH----S---TT---CEEEEEEE
T ss_pred HHHHHc----C---CC---CEEEEEEE
Confidence 333 3 23 67777653
No 119
>1i88_A CHS2, chalcone synthase 2; polyketide synthase, transferase; 1.45A {Medicago sativa} SCOP: c.95.1.2 c.95.1.2 PDB: 1i89_A 1i86_A 1i8b_A 1bi5_A 1cml_A* 1d6f_A* 1chw_A* 1cgz_A* 1cgk_A* 1bq6_A* 1jwx_A 1d6i_A 1d6h_A* 1u0v_A 1u0w_A* 1z1e_A* 1z1f_A*
Probab=56.78 E-value=23 Score=32.09 Aligned_cols=47 Identities=11% Similarity=-0.009 Sum_probs=32.0
Q ss_pred hhHHHHHHHHhhhcCCCCCCCCceEEEEcC---CChhHHHHHHHHcCCCcc
Q 047978 203 DNIDKFLAESFDQVSLNDHDWNSLFWMMHP---IGPAVLDQIEGKLGLEKT 250 (320)
Q Consensus 203 ~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~---~~~~~~~~~~~~lg~~~e 250 (320)
+...++++++|+++|++++||+ ..++.+. ..+..-..+++.||++..
T Consensus 104 ~La~~Aa~~aL~~agl~~~~Id-~li~~t~~~~~~p~~a~~v~~~lGl~~~ 153 (389)
T 1i88_A 104 RLGKEAAVKAIKEWGQPKSKIT-HLIVCTTSGVDMPGADYQLTKLLGLRPY 153 (389)
T ss_dssp HHHHHHHHHHHHHHCSCGGGCC-EEEEEESSCCCSSCHHHHHHHHHTCCTT
T ss_pred HHHHHHHHHHHHHcCCCHHHCC-EEEEEECCCCCCchHHHHHHHHcCcCCC
Confidence 4456778899999999999874 2222222 233456788999999754
No 120
>1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1
Probab=55.70 E-value=5.4 Score=36.60 Aligned_cols=41 Identities=15% Similarity=0.068 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCC
Q 047978 60 GKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGL 104 (320)
Q Consensus 60 a~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl 104 (320)
...|++++|+++|++++|||++-.. ... ........+.||+
T Consensus 298 ~~~a~~~al~~Agl~~~dId~ie~h-eaf---a~~~l~~~~~lg~ 338 (401)
T 1ulq_A 298 PVPATRKALERAGLSFSDLGLIELN-EAF---AAQALAVLREWSL 338 (401)
T ss_dssp HHHHHHHHHHHTTCCGGGCSEEEEC-CSB---HHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEEe-cch---HHHHHHHHHHcCC
Confidence 4789999999999999999977533 211 1122333456887
No 121
>3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A
Probab=55.63 E-value=4.4 Score=37.62 Aligned_cols=47 Identities=11% Similarity=0.035 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHcCCCCCCcCEEEEEeeCC-CCCCCHHHHHHHHcCCCc
Q 047978 59 LGKEAVSKAIKEWGQPISKITHLISCSVSG-VDMPGADYQLTKLLGLKP 106 (320)
Q Consensus 59 la~~Aa~~aL~~ag~~~~dId~li~~s~t~-~~~p~~a~~l~~~LGl~~ 106 (320)
-..+|++++|+++|++|+|||++.. +-+. ...+.....+.+.+|.+.
T Consensus 294 ~~~~ai~~al~~Agl~~~dId~ve~-HgtgT~~d~~e~~al~~~~g~~~ 341 (428)
T 3kzu_A 294 GAQRCMVAALKRAGIVPDEIDYINA-HGTSTMADTIELGAVERVVGEAA 341 (428)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCEEEC-CCCSSTTHHHHHHHHHHHHGGGG
T ss_pred HHHHHHHHHHHHcCCCHHHeeEEEe-cCCcchhhHHHHHHHHHHhccCC
Confidence 4678999999999999999998853 3222 333334455666777643
No 122
>1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A
Probab=55.29 E-value=5.3 Score=36.62 Aligned_cols=43 Identities=14% Similarity=0.114 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCc
Q 047978 60 GKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKP 106 (320)
Q Consensus 60 a~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~ 106 (320)
...|++++|+++|++++|||++-. +.+. ........+.||+..
T Consensus 295 ~~~a~~~al~~Agl~~~dId~ve~-h~~f---t~~~l~~~~~lg~~~ 337 (393)
T 1afw_A 295 PAYAIPKVLEATGLQVQDIDIFEI-NEAF---AAQALYCIHKLGIDL 337 (393)
T ss_dssp HHHHHHHHHHHHTCCGGGCSEEEE-CCSB---HHHHHHHHHHHTCCG
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEE-eccC---HHHHHHHHHHhCCCC
Confidence 478999999999999999997743 3222 112333446788864
No 123
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=53.61 E-value=6 Score=38.27 Aligned_cols=27 Identities=7% Similarity=0.014 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEee
Q 047978 60 GKEAVSKAIKEWGQPISKITHLISCSV 86 (320)
Q Consensus 60 a~~Aa~~aL~~ag~~~~dId~li~~s~ 86 (320)
=..|++.||+++|++++|||+|.+...
T Consensus 52 P~~AI~~cL~~AGi~~~DID~Va~~~~ 78 (576)
T 3ven_A 52 PVQAAAFCLAQAGLTVDDLDAVAFGWD 78 (576)
T ss_dssp CHHHHHHHHHHHTCCGGGCSEEEESSC
T ss_pred CHHHHHHHHHHcCCCHHHCcEEEEECC
Confidence 366799999999999999999986543
No 124
>2p0u_A Stilbenecarboxylate synthase 2; polyketide synthase, PKS type transferase; 1.90A {Marchantia polymorpha}
Probab=53.29 E-value=22 Score=32.70 Aligned_cols=46 Identities=11% Similarity=0.023 Sum_probs=32.0
Q ss_pred hhHHHHHHHHhhhcCCCCCCCCceEEEE-c---CCChhHHHHHHHHcCCCcc
Q 047978 203 DNIDKFLAESFDQVSLNDHDWNSLFWMM-H---PIGPAVLDQIEGKLGLEKT 250 (320)
Q Consensus 203 ~~~~~~i~~~l~~~g~~~~d~~~~~~i~-h---~~~~~~~~~~~~~lg~~~e 250 (320)
+...++++++|+++|++++||+ .+++ . +..+..-..+++.||++..
T Consensus 122 ~La~~Aa~~aL~~agl~~~dId--~li~~t~~~~~~p~~a~~v~~~LGl~~~ 171 (413)
T 2p0u_A 122 KLAKEASMNAIKEWGRPKSEIT--HIVMATTSGVNMPGAELATAKLLGLRPN 171 (413)
T ss_dssp HHHHHHHHHHHHHHTSCGGGCC--EEEEEESSCCCBSCHHHHHHHHHTCCTT
T ss_pred HHHHHHHHHHHHHhCcCHHHCC--EEEEEecCCcccCcHHHHHHHHhCCCCC
Confidence 4456778899999999999874 3332 2 2234456788999999754
No 125
>1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C*
Probab=52.82 E-value=6.2 Score=36.03 Aligned_cols=42 Identities=19% Similarity=0.156 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCC
Q 047978 60 GKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLK 105 (320)
Q Consensus 60 a~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~ 105 (320)
...|++++|+++|++|+|||++-..- .+......+.+.||+.
T Consensus 287 ~~~a~~~al~~Agl~~~dId~ve~~d----~f~~~~~~~~~~lg~~ 328 (390)
T 1wdk_C 287 PVPATQKALKRAGLNMADIDFIELNE----AFAAQALPVLKDLKVL 328 (390)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEECC----SBHHHHHHHHHHTTCG
T ss_pred HHHHHHHHHHHcCCChhhCcEEEecc----CCHHHHHHHHHHcCCC
Confidence 46899999999999999999885321 1222345567888886
No 126
>1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1
Probab=52.66 E-value=3.1 Score=38.31 Aligned_cols=46 Identities=15% Similarity=0.170 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEEeeCC--CCCCCHHHHHHHHcCC
Q 047978 58 KLGKEAVSKAIKEWGQPISKITHLISCSVSG--VDMPGADYQLTKLLGL 104 (320)
Q Consensus 58 ~la~~Aa~~aL~~ag~~~~dId~li~~s~t~--~~~p~~a~~l~~~LGl 104 (320)
.-..++.+++|+++|++|+|||++. ++.+. .-.|.....+.+.||.
T Consensus 275 ~~~~~ai~~al~~Agl~~~dId~ve-~Hgtgt~~gD~~E~~al~~~~g~ 322 (408)
T 1j3n_A 275 KGAALAMARALKDAGIAPEQVGYIN-AHGTSTPVGDRAEVLAIKRVFGD 322 (408)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEE-CCCCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHcCEEE-EeCCcCcccCHHHHHHHHHHhcC
Confidence 4567899999999999999999775 33333 2122334556666664
No 127
>1ee0_A 2-pyrone synthase; polyketide synthase, thiolase fold, transferase; HET: CAA; 2.05A {Gerbera hybrid cultivar} SCOP: c.95.1.2 c.95.1.2 PDB: 1qlv_A
Probab=52.62 E-value=20 Score=32.81 Aligned_cols=46 Identities=15% Similarity=0.083 Sum_probs=31.8
Q ss_pred hhHHHHHHHHhhhcCCCCCCCCceEEEE-cC---CChhHHHHHHHHcCCCcc
Q 047978 203 DNIDKFLAESFDQVSLNDHDWNSLFWMM-HP---IGPAVLDQIEGKLGLEKT 250 (320)
Q Consensus 203 ~~~~~~i~~~l~~~g~~~~d~~~~~~i~-h~---~~~~~~~~~~~~lg~~~e 250 (320)
+...++++++|+++|++++||+ .+++ +. ..+..-..+++.||++..
T Consensus 109 ~La~~Aa~~aL~~agl~~~~Id--~vi~~t~~~~~~p~~a~~v~~~lGl~~~ 158 (402)
T 1ee0_A 109 MLGKEAAVKAIDEWGLPKSKIT--HLIFCTTAGVDMPGADYQLVKLLGLSPS 158 (402)
T ss_dssp HHHHHHHHHHHHHHCSCGGGCC--EEEEECSSCCEESCHHHHHHHHHTCCTT
T ss_pred HHHHHHHHHHHHHcCCCHHHCC--EEEEEecCCCCCChHHHHHHHHcCcCCC
Confidence 4455778899999999999874 3333 22 123456788899999754
No 128
>3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes}
Probab=52.43 E-value=7.3 Score=35.83 Aligned_cols=47 Identities=13% Similarity=0.108 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEE-EeeCCCCCCCHHHHHHHHcCC
Q 047978 58 KLGKEAVSKAIKEWGQPISKITHLIS-CSVSGVDMPGADYQLTKLLGL 104 (320)
Q Consensus 58 ~la~~Aa~~aL~~ag~~~~dId~li~-~s~t~~~~p~~a~~l~~~LGl 104 (320)
.-..+|++++|+++|++|+|||++.. .|.|+.-.+.-...|...++.
T Consensus 277 ~~~~~a~~~al~~agl~~~dId~ve~HgtgT~~~d~~e~~al~~~~~~ 324 (413)
T 3o04_A 277 EGAARAMKMAIDDAGLTPDKVDYINAHGTSTPYNDEYETQAIKTVFGE 324 (413)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEECCCCCCHHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHHHcCCCHHHcCEEEEeCCcCcccCHHHHHHHHHHhcc
Confidence 44678999999999999999998763 232332233344455555554
No 129
>4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A*
Probab=51.67 E-value=7.6 Score=36.27 Aligned_cols=46 Identities=13% Similarity=0.105 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHcCCCCCCcCEEEEE-eeCCCCCCCHHHHHHHHcCC
Q 047978 59 LGKEAVSKAIKEWGQPISKITHLISC-SVSGVDMPGADYQLTKLLGL 104 (320)
Q Consensus 59 la~~Aa~~aL~~ag~~~~dId~li~~-s~t~~~~p~~a~~l~~~LGl 104 (320)
-..+|++++|+++|++|+|||++... +.|+...+.-...+.+.+|.
T Consensus 309 ~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~~d~~E~~al~~~~~~ 355 (451)
T 4ddo_A 309 GAMRAMKLALRMGDVAPEQVDYVNAHATSTPVGDAGEIEALKTVFGV 355 (451)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHHcCCCHHHcCEEEecCCcCcccCHHHHHHHHHHhCC
Confidence 45789999999999999999988633 22222233334556666664
No 130
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=51.41 E-value=16 Score=32.56 Aligned_cols=28 Identities=25% Similarity=0.306 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEEe
Q 047978 58 KLGKEAVSKAIKEWGQPISKITHLISCS 85 (320)
Q Consensus 58 ~la~~Aa~~aL~~ag~~~~dId~li~~s 85 (320)
+....+.+++|+++|++++|||.|.++.
T Consensus 49 ~~l~~~i~~~L~~agi~~~did~Ia~~~ 76 (330)
T 2ivn_A 49 RLMKPLLRKALSEAGVSLDDIDVIAFSQ 76 (330)
T ss_dssp HHHHHHHHHHHHHHTCCTTTCCEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCHHHCcEEEEEC
Confidence 3456789999999999999999987654
No 131
>2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A
Probab=51.02 E-value=7.7 Score=36.23 Aligned_cols=43 Identities=21% Similarity=0.168 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCc
Q 047978 60 GKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKP 106 (320)
Q Consensus 60 a~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~ 106 (320)
...|++++|+++|++++|||++=. +.++ . .......+.||+..
T Consensus 317 ~~~A~~~Al~~AGl~~~DId~iE~-h~af--t-~~~l~~~~~lG~~~ 359 (442)
T 2wu9_A 317 PAVAIPAAVKAAGLELDDIDLFEI-NEAF--A-SQFVYCRNKLGLDP 359 (442)
T ss_dssp HHHHHHHHHHHTTCCGGGCCEEEE-CCSB--H-HHHHHHHHHHTCCG
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEE-eCCC--h-HHHHHHHHHhCCCC
Confidence 468999999999999999997743 3222 1 12233346788864
No 132
>1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1
Probab=49.66 E-value=8.6 Score=35.37 Aligned_cols=46 Identities=9% Similarity=0.027 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHcCCCCCCcCEEEEE-eeCCCCCCCHHHHHHHHcCC
Q 047978 59 LGKEAVSKAIKEWGQPISKITHLISC-SVSGVDMPGADYQLTKLLGL 104 (320)
Q Consensus 59 la~~Aa~~aL~~ag~~~~dId~li~~-s~t~~~~p~~a~~l~~~LGl 104 (320)
-..+|.+++|+++|++|+|||+|... |.|+.-.+.-+..+++.+|-
T Consensus 280 ~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~~D~~E~~al~~~~g~ 326 (415)
T 1tqy_B 280 GLERAIRLALNDAGTGPEDVDVVFADGAGVPELDAAEARAIGRVFGR 326 (415)
T ss_dssp SHHHHHHHHHHHHTCCGGGCCEEECCCCCSHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHcCCCHhHCCEEEEeCCCCcCcCHHHHHHHHHHhCC
Confidence 45789999999999999999987633 22222223334455666653
No 133
>4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum}
Probab=49.10 E-value=7.4 Score=35.80 Aligned_cols=48 Identities=8% Similarity=0.009 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCEEEE-EeeCCCCCCCHHHHHHHHcCC
Q 047978 57 PKLGKEAVSKAIKEWGQPISKITHLIS-CSVSGVDMPGADYQLTKLLGL 104 (320)
Q Consensus 57 ~~la~~Aa~~aL~~ag~~~~dId~li~-~s~t~~~~p~~a~~l~~~LGl 104 (320)
.+-..+|.+++|+++|++|+|||+|.. .|.|+.-.|.-+..+.+.+|-
T Consensus 278 ~~~~~~ai~~Al~~Agl~~~dId~ve~Hgtgt~~~D~~E~~al~~~~~~ 326 (412)
T 4ewg_A 278 ASTMARAMQLALEDAKLDANAIAYVNAHGTSTDRGDVAESQATARTFGE 326 (412)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGEEEEECCCCCCHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEccCCCCccccHHHHHHHHHHcCC
Confidence 456789999999999999999998863 233332233334455566553
No 134
>1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1
Probab=49.00 E-value=8.9 Score=35.29 Aligned_cols=46 Identities=13% Similarity=0.132 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEEeeCC--CCCCCHHHHHHHHcCC
Q 047978 58 KLGKEAVSKAIKEWGQPISKITHLISCSVSG--VDMPGADYQLTKLLGL 104 (320)
Q Consensus 58 ~la~~Aa~~aL~~ag~~~~dId~li~~s~t~--~~~p~~a~~l~~~LGl 104 (320)
.-..++.+++|+++|++|+|||++.. +.|. .-.+.....|.+.+|.
T Consensus 281 ~~~~~ai~~al~~agl~~~dId~ve~-Hgtgt~~~D~~E~~al~~~~g~ 328 (416)
T 1e5m_A 281 RGATRAIAWALKDSGLKPEMVSYINA-HGTSTPANDVTETRAIKQALGN 328 (416)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEC-CCCSCHHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHHHcCCCHhHCCEEEE-ECCCCcCcCHHHHHHHHHHHcc
Confidence 45688999999999999999998863 3332 2223334455666654
No 135
>2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus}
Probab=48.72 E-value=9 Score=35.58 Aligned_cols=46 Identities=15% Similarity=0.130 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEEeeCC--CCCCCHHHHHHHHcCC
Q 047978 58 KLGKEAVSKAIKEWGQPISKITHLISCSVSG--VDMPGADYQLTKLLGL 104 (320)
Q Consensus 58 ~la~~Aa~~aL~~ag~~~~dId~li~~s~t~--~~~p~~a~~l~~~LGl 104 (320)
.-..++.+++|+++|++|+|||+|.. +.+. .-.|.-...+.+.+|.
T Consensus 301 ~~~~~ai~~Al~~Agl~p~dId~ve~-HgtgT~~~D~~E~~al~~~fg~ 348 (437)
T 2gqd_A 301 EGGSRAMQAAMDDAGIEPKDVQYLNA-HGTSTPVGDLNEVKAIKNTFGE 348 (437)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEC-CCCSCHHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHHHcCCCHhhCCEEEE-ECCCCcCcCHHHHHHHHHHHhc
Confidence 45678999999999999999998863 3333 2223334456666664
No 136
>2gel_A Putative GRAM negative resuscitation promoting FA; YEAZ, RPF, actin-like-fold, glycoprotease, chaperone; 2.05A {Salmonella typhimurium} PDB: 2gem_A 1okj_A
Probab=48.52 E-value=14 Score=31.02 Aligned_cols=29 Identities=14% Similarity=0.092 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCEEEEEe
Q 047978 57 PKLGKEAVSKAIKEWGQPISKITHLISCS 85 (320)
Q Consensus 57 ~~la~~Aa~~aL~~ag~~~~dId~li~~s 85 (320)
.+.-..+.+++|+++|++++|||.|.++.
T Consensus 35 ~~~l~~~i~~~L~~a~~~~~did~Iav~~ 63 (231)
T 2gel_A 35 TQRILPMVQEILAASGASLNEIDALAFGR 63 (231)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGCSEEEEEC
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEc
Confidence 34467889999999999999999987765
No 137
>3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A
Probab=48.20 E-value=25 Score=31.90 Aligned_cols=47 Identities=9% Similarity=-0.026 Sum_probs=31.9
Q ss_pred hhHHHHHHHHhhhcCCCCCCCCceEEEEcC---CChhHHHHHHHHcCCCcc
Q 047978 203 DNIDKFLAESFDQVSLNDHDWNSLFWMMHP---IGPAVLDQIEGKLGLEKT 250 (320)
Q Consensus 203 ~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~---~~~~~~~~~~~~lg~~~e 250 (320)
+...++++++|+++|++++||+ ..++.+. ..+..-..+++.||++..
T Consensus 100 ~La~~Aa~~aL~~ag~~~~~Id-~li~~t~~~~~~p~~a~~v~~~lGl~~~ 149 (387)
T 3a5r_A 100 ELGKEAALKAIKEWGQPKSKIT-HLIVCCLAGVDMPGADYQLTKLLDLDPS 149 (387)
T ss_dssp HHHHHHHHHHHHHHCSCGGGCC-EEEEEESSCCEESCHHHHHHHHTTCCTT
T ss_pred HHHHHHHHHHHHHcCCCHHHCC-EEEEEecCCCCCCcHHHHHHHHcCcCCC
Confidence 4456778899999999999874 2222222 123456788999999754
No 138
>2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens}
Probab=48.01 E-value=6.5 Score=36.35 Aligned_cols=43 Identities=16% Similarity=0.166 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCc
Q 047978 60 GKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKP 106 (320)
Q Consensus 60 a~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~ 106 (320)
...|++++|+++|++++|||++-...+ ++.......+.||+.+
T Consensus 315 ~~~a~~~al~~Agl~~~dId~vE~h~a----f~~~~~~~~~~lg~~~ 357 (418)
T 2iik_A 315 PAYAIPVALQKAGLTVSDVDIFEINEA----FASQAAYCVEKLRLPP 357 (418)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEEEECCS----BHHHHHHHHHHHTCCG
T ss_pred HHHHHHHHHHHcCCCHHHCCeeeeecc----chHHHHHHHHHcCCCc
Confidence 456999999999999999998754432 2233445567788864
No 139
>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris}
Probab=47.66 E-value=13 Score=33.93 Aligned_cols=45 Identities=13% Similarity=0.118 Sum_probs=32.3
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHc-CC
Q 047978 56 VPKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLL-GL 104 (320)
Q Consensus 56 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~L-Gl 104 (320)
......++++++|+++|++++|||.+|. +... +..-..++++| |+
T Consensus 289 a~~~~~~~i~~~L~~~gl~~~dId~~v~-Hqan---~~i~~~~~~~llgl 334 (392)
T 3led_A 289 VVPLVSEMIIEHAREIGIDPHGLKRMWL-HQAN---INMNEIIGRKVLGR 334 (392)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCSEEEE-CSSC---HHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCcEEEE-cCCC---HHHHHHHHHHhcCC
Confidence 3456678899999999999999998874 3222 22445677775 75
No 140
>2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A
Probab=47.23 E-value=9.8 Score=35.34 Aligned_cols=46 Identities=11% Similarity=0.146 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEEeeCC--CCCCCHHHHHHHHcCC
Q 047978 58 KLGKEAVSKAIKEWGQPISKITHLISCSVSG--VDMPGADYQLTKLLGL 104 (320)
Q Consensus 58 ~la~~Aa~~aL~~ag~~~~dId~li~~s~t~--~~~p~~a~~l~~~LGl 104 (320)
.-..+|.+++|+++|++|+|||+|.. +.+. .-.|.-...|.+.+|.
T Consensus 301 ~~~~~ai~~Al~~Agl~p~dId~ve~-HgtgT~~gD~~E~~al~~~fg~ 348 (438)
T 2iwz_A 301 EGALRCMAAALKDAGVQPEEISYINA-HATSTPLGDAAENKAIKHLFKD 348 (438)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEC-CCCSCHHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHHHcCCCHHHcCEEEe-cCCCCcccCHHHHHHHHHHHhc
Confidence 45688999999999999999998753 3332 1122233445555553
No 141
>1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1
Probab=46.89 E-value=10 Score=35.02 Aligned_cols=46 Identities=17% Similarity=0.129 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEEeeCC--CCCCCHHHHHHHHcCC
Q 047978 58 KLGKEAVSKAIKEWGQPISKITHLISCSVSG--VDMPGADYQLTKLLGL 104 (320)
Q Consensus 58 ~la~~Aa~~aL~~ag~~~~dId~li~~s~t~--~~~p~~a~~l~~~LGl 104 (320)
.-..++.+++|+++|++|+|||+|.. +.|. .-.|.-...+.+.+|.
T Consensus 283 ~~~~~ai~~al~~agl~~~dId~ve~-Hgtgt~~gD~~E~~al~~~f~~ 330 (424)
T 1tqy_A 283 REMAETIRVALDESRTDATDIDYINA-HGSGTRQNDRHETAAYKRALGE 330 (424)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEC-CCCCCHHHHHHHHHHHHHHTGG
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEe-cCccCcCcCHHHHHHHHHHhcc
Confidence 44678999999999999999998763 3333 2122233445555653
No 142
>2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A*
Probab=46.70 E-value=10 Score=34.96 Aligned_cols=26 Identities=15% Similarity=0.224 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEE
Q 047978 58 KLGKEAVSKAIKEWGQPISKITHLIS 83 (320)
Q Consensus 58 ~la~~Aa~~aL~~ag~~~~dId~li~ 83 (320)
.-..+|.+++|+++|++++|||++..
T Consensus 285 ~~~~~ai~~al~~agl~~~dId~ve~ 310 (416)
T 2wge_A 285 VRAGRAMTRSLELAGLSPADIDHVNA 310 (416)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEC
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 35678999999999999999998863
No 143
>2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A
Probab=46.30 E-value=10 Score=35.07 Aligned_cols=46 Identities=11% Similarity=0.104 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEE-eeCCCCCCCHHHHHHHHcC
Q 047978 58 KLGKEAVSKAIKEWGQPISKITHLISC-SVSGVDMPGADYQLTKLLG 103 (320)
Q Consensus 58 ~la~~Aa~~aL~~ag~~~~dId~li~~-s~t~~~~p~~a~~l~~~LG 103 (320)
.-..+|++++|+++|++++|||++... |.|+...+.....+...++
T Consensus 294 ~~~~~ai~~al~~agl~~~dId~ve~HgtgT~~~D~~E~~al~~~~~ 340 (431)
T 2ix4_A 294 KGAVLAMTRALRQSGLCPNQIDYVNAHATSTPIGDAVEARAIKTVFS 340 (431)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCCHHHcCEEEEeCCcCcccCHHHHHHHHHHHc
Confidence 456789999999999999999987633 2233222333344444444
No 144
>2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis}
Probab=46.09 E-value=11 Score=34.86 Aligned_cols=27 Identities=22% Similarity=0.278 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEE
Q 047978 58 KLGKEAVSKAIKEWGQPISKITHLISC 84 (320)
Q Consensus 58 ~la~~Aa~~aL~~ag~~~~dId~li~~ 84 (320)
.-..++.+++|+++|++|+|||++...
T Consensus 302 ~~~~~ai~~al~~Agl~~~dId~ve~H 328 (434)
T 2gp6_A 302 ERAGHAITRAIQLAGLAPGDIDHVNAH 328 (434)
T ss_dssp HHHHHHHHHHHHHTTCCTTTEEEEECC
T ss_pred HHHHHHHHHHHHHcCCCHHHcCEEEEe
Confidence 456789999999999999999987644
No 145
>3r6m_A YEAZ, resuscitation promoting factor; actin/HSP70 nucleotide-binding fold, bacterial resuscitation BUT non-culturable state, Y YJEE; 3.10A {Vibrio parahaemolyticus}
Probab=46.07 E-value=22 Score=29.60 Aligned_cols=48 Identities=21% Similarity=0.068 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEEeeCC-C----CCCCHHHHHHHHcCCC
Q 047978 58 KLGKEAVSKAIKEWGQPISKITHLISCSVSG-V----DMPGADYQLTKLLGLK 105 (320)
Q Consensus 58 ~la~~Aa~~aL~~ag~~~~dId~li~~s~t~-~----~~p~~a~~l~~~LGl~ 105 (320)
+.-....+++|+++|++++|||.|.++.--+ | ..-+.+.-++-.++++
T Consensus 37 ~~L~p~i~~~L~~a~~~~~dld~Iav~~GPGsfTglRig~~~AkgLa~~~~iP 89 (213)
T 3r6m_A 37 KKVLPMVDEVLKEAGLTLQDLDALAFGRGPGSFTGVRIGIGIAQGLAFGAELP 89 (213)
T ss_dssp HHHHHHHHHHHHTTTCCTTTCSEEEEEEESSCHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHcCCCHHHccEEEEecCCCchhhHHHHHHHHHHHHHHhCCC
Confidence 4445689999999999999999997766443 2 1113444555556655
No 146
>1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A
Probab=45.77 E-value=30 Score=31.72 Aligned_cols=46 Identities=9% Similarity=0.068 Sum_probs=31.5
Q ss_pred hhHHHHHHHHhhhcCCCCCCCCceEEE-EcCC---ChhHHHHHHHHcCCCcc
Q 047978 203 DNIDKFLAESFDQVSLNDHDWNSLFWM-MHPI---GPAVLDQIEGKLGLEKT 250 (320)
Q Consensus 203 ~~~~~~i~~~l~~~g~~~~d~~~~~~i-~h~~---~~~~~~~~~~~lg~~~e 250 (320)
+...++++++|+++|++++||+ .++ .... .+..-..+++.||++..
T Consensus 127 ~La~~Aa~~AL~~agl~~~~Id--~li~~t~~~~~~p~~a~~v~~~lGl~~~ 176 (413)
T 1xes_A 127 RLAKEAAEKAIQEWGQSKSGIT--HLIFCSTTTPDLPGADFEVAKLLGLHPS 176 (413)
T ss_dssp HHHHHHHHHHHHHHCSCGGGCC--EEEEEESCCCEESCHHHHHHHHHTCCTT
T ss_pred HHHHHHHHHHHHHcCCCHHHCC--EEEEEEeCCCccchHHHHHHHHcCcCCc
Confidence 4456778899999999999874 333 2221 23355778899999754
No 147
>1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A
Probab=45.60 E-value=9.3 Score=35.35 Aligned_cols=47 Identities=13% Similarity=0.139 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEEee-CCCCCCCHHHHHHHHcCC
Q 047978 58 KLGKEAVSKAIKEWGQPISKITHLISCSV-SGVDMPGADYQLTKLLGL 104 (320)
Q Consensus 58 ~la~~Aa~~aL~~ag~~~~dId~li~~s~-t~~~~p~~a~~l~~~LGl 104 (320)
.-..++.+++|+++|++|+|||++....+ |+.-.|.-...+.+.+|-
T Consensus 296 ~~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~~D~~E~~al~~~~g~ 343 (430)
T 1ox0_A 296 QGAIKAIKLALEEAEISPEQVAYVNAHGTSTPANEKGESGAIVAVLGK 343 (430)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCCEECCCCSCHHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHHHhCcCHHHcCEEEEeCCcCcccCHHHHHHHHHHhCC
Confidence 45678999999999999999998763322 222223333455666664
No 148
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=45.20 E-value=13 Score=33.73 Aligned_cols=53 Identities=21% Similarity=0.153 Sum_probs=40.4
Q ss_pred cchHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCC----------CHHHHHHHHcCCCc
Q 047978 54 PKVPKLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMP----------GADYQLTKLLGLKP 106 (320)
Q Consensus 54 e~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p----------~~a~~l~~~LGl~~ 106 (320)
.....+-.+|++++|+++++++++||+|=+...|-++.| +....|+++.|++-
T Consensus 68 ~~lg~~~a~av~~~l~~~~~~~~~i~~IGsHGQTv~H~P~~~~~~TlQiGd~~~iA~~tgi~v 130 (370)
T 3cqy_A 68 RSVGKLFALAVNNLLAKTKIAKDEIIAIGSHGQTVRHMPNLEVGFTLQIGDPNTIATETGIDV 130 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCGGGEEEEEEEEEEEEEETTSSSCEEEEESCHHHHHHHHSSCE
T ss_pred HHHHHHHHHHHHHHHHHcCCCcccccEEEeCCcccccCCCCCCCceEecCCHHHHHHHHCcCE
Confidence 334556789999999999999999998866666654444 24578999999874
No 149
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=44.24 E-value=17 Score=32.49 Aligned_cols=27 Identities=15% Similarity=0.099 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHcCCCCCCcCEEEEEe
Q 047978 59 LGKEAVSKAIKEWGQPISKITHLISCS 85 (320)
Q Consensus 59 la~~Aa~~aL~~ag~~~~dId~li~~s 85 (320)
.-..+.+++|+++|++++|||.|.+..
T Consensus 55 ~l~~~i~~~L~~ag~~~~did~Iav~~ 81 (334)
T 3eno_A 55 VIDTVISRALEKAKISIHDIDLIGFSM 81 (334)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCEEEEEC
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEEc
Confidence 446889999999999999999886543
No 150
>1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A*
Probab=44.19 E-value=15 Score=33.59 Aligned_cols=28 Identities=11% Similarity=0.112 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEEe
Q 047978 58 KLGKEAVSKAIKEWGQPISKITHLISCS 85 (320)
Q Consensus 58 ~la~~Aa~~aL~~ag~~~~dId~li~~s 85 (320)
+...++.+++|+++|++++|||.+++..
T Consensus 207 ~~~~~~~~~~L~~agl~~~did~~~~H~ 234 (396)
T 1xpm_A 207 RSFQQSWNEYAKRQGKSLADFASLCFHV 234 (396)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCSEEEECC
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEecC
Confidence 4467889999999999999999987553
No 151
>2d3m_A Pentaketide chromone synthase; chalcone synthase, polyketide synthase, transferase; HET: COA; 1.60A {Aloe arborescens} PDB: 2d51_A 2d52_A*
Probab=38.19 E-value=27 Score=31.92 Aligned_cols=45 Identities=18% Similarity=0.133 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCE----EEEEeeCCCCCCCHHHHHHHHcCCCcc
Q 047978 58 KLGKEAVSKAIKEWGQPISKITH----LISCSVSGVDMPGADYQLTKLLGLKPS 107 (320)
Q Consensus 58 ~la~~Aa~~aL~~ag~~~~dId~----li~~s~t~~~~p~~a~~l~~~LGl~~~ 107 (320)
+...++.+++|+++|++++ ||. ++. +... ...-..++++||++..
T Consensus 290 ~~~~~~i~~~L~~agl~~~-id~~di~~v~-Hq~~---~~i~~~~~~~lgl~~~ 338 (406)
T 2d3m_A 290 NNVEACLIDVFKSVGITPP-EDWNSLFWIP-HPGG---RAILDQVEAKLKLRPE 338 (406)
T ss_dssp HHHHHHHHHHHHTTTCCCC-SSGGGSEEEE-CCSC---HHHHHHHHHHTTCCTT
T ss_pred HHHHHHHHHHHHhcCCCCC-CCccceEEEE-CCCC---HHHHHHHHHHcCCCHH
Confidence 3456788999999999998 887 543 3222 1223568889999764
No 152
>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea}
Probab=36.97 E-value=15 Score=37.69 Aligned_cols=49 Identities=10% Similarity=0.137 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCEEEEE-eeCCCCCCCHHHHHHHHcCCC
Q 047978 57 PKLGKEAVSKAIKEWGQPISKITHLISC-SVSGVDMPGADYQLTKLLGLK 105 (320)
Q Consensus 57 ~~la~~Aa~~aL~~ag~~~~dId~li~~-s~t~~~~p~~a~~l~~~LGl~ 105 (320)
..-..++.+++|+++|++|+|||+|... |.|+.-.|.-+..|.+.+|..
T Consensus 285 ~~~~~~~i~~Al~~Agl~p~dId~ve~HgtgT~~gD~~E~~al~~~f~~~ 334 (915)
T 2qo3_A 285 GPAQRRVIRQALESCGLEPGDVDAVEAHGTGTALGDPIEANALLDTYGRD 334 (915)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGCCEEECCCCCCTTTHHHHHHHHHHHTSSS
T ss_pred HHHHHHHHHHHHHHcCCCHHHCcEEEecCCCCccCCHHHHHHHHHHhccc
Confidence 4557789999999999999999988633 333344555667788888753
No 153
>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A
Probab=35.56 E-value=10 Score=39.19 Aligned_cols=48 Identities=10% Similarity=0.059 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCEEE-EEeeCCCCCCCHHHHHHHHcCC
Q 047978 57 PKLGKEAVSKAIKEWGQPISKITHLI-SCSVSGVDMPGADYQLTKLLGL 104 (320)
Q Consensus 57 ~~la~~Aa~~aL~~ag~~~~dId~li-~~s~t~~~~p~~a~~l~~~LGl 104 (320)
.+-..++.+++|+++|++|+|||+|. ++|.|+.-.|.-+..|.+.++-
T Consensus 268 ~~~q~~~i~~Al~~Agl~p~dIdyvEaHgTgT~~gD~~E~~Al~~~f~~ 316 (965)
T 3hhd_A 268 GDIQEQLIRSLYQSAGVAPESFEYIEAHGTGTKVGDPQELNGITRALCA 316 (965)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGEEEEECCCCCCTTHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHHHHhCCCHHHhccccccCCCCCCCCHHHHHHHHHHhcc
Confidence 34567899999999999999999886 3333443345556667777764
No 154
>2w6k_A COBE; biosynthetic protein, cobalamin, complete proteome, vitamin B12; 1.70A {Pseudomonas aeruginosa} SCOP: c.151.1.1 PDB: 2bsn_A 2w6l_A
Probab=35.55 E-value=44 Score=25.87 Aligned_cols=48 Identities=25% Similarity=0.417 Sum_probs=34.6
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCC-CCCCCHHHHHHHHcCCCc
Q 047978 56 VPKLGKEAVSKAIKEWGQPISKITHLISCSVSG-VDMPGADYQLTKLLGLKP 106 (320)
Q Consensus 56 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~-~~~p~~a~~l~~~LGl~~ 106 (320)
+.+...++.+++|+++|+++.+|+.| +|... -..|+. ..++++||++-
T Consensus 23 ~~~~i~~ai~~aL~~~~l~~~~v~~l--atid~K~dE~gL-~~~A~~lg~pl 71 (145)
T 2w6k_A 23 SAEHLRALLERTLGEHGRSLAELDAL--ASIDGKRDEPGL-RQLATLLERPV 71 (145)
T ss_dssp CHHHHHHHHHHHHHHTTCCGGGCCEE--EEECSSSCCHHH-HHHHHHHTSCE
T ss_pred CHHHHHHHHHHHHHHcCCCHHHcceE--echHHhCCCHHH-HHHHHHhCCCc
Confidence 44556788999999999999999987 45444 445543 44777778763
No 155
>2a6a_A Hypothetical protein TM0874; glycoprotein endopeptidase, structural genomics, JOI for structural genomics, JCSG; 2.50A {Thermotoga maritima} SCOP: c.55.1.9 c.55.1.9
Probab=35.40 E-value=25 Score=29.33 Aligned_cols=29 Identities=10% Similarity=0.050 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCEEEEEe
Q 047978 57 PKLGKEAVSKAIKEWGQPISKITHLISCS 85 (320)
Q Consensus 57 ~~la~~Aa~~aL~~ag~~~~dId~li~~s 85 (320)
++......+++|+++|++++|||.|.++.
T Consensus 46 se~L~p~i~~~L~~a~~~~~dld~Iav~~ 74 (218)
T 2a6a_A 46 AEILPVVVKKLLDELDLKVKDLDVVGVGI 74 (218)
T ss_dssp GGHHHHHHHHHHHHHTCCGGGCSEEEEEC
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEc
Confidence 34456778999999999999999987665
No 156
>3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A*
Probab=34.12 E-value=27 Score=31.82 Aligned_cols=29 Identities=10% Similarity=-0.089 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCEEEEEe
Q 047978 57 PKLGKEAVSKAIKEWGQPISKITHLISCS 85 (320)
Q Consensus 57 ~~la~~Aa~~aL~~ag~~~~dId~li~~s 85 (320)
.+...++.+++|+++|++++|||.+++..
T Consensus 211 ~~~~~~~~~~~l~~~g~~~~did~~v~Hq 239 (388)
T 3v4n_A 211 IQSFAQVWDEHKKRTGLDFADYDALAFHI 239 (388)
T ss_dssp HHHHHHHHHHHHHHHCCCGGGCSEEEECC
T ss_pred HHHHHHHHHHHHHHhCCCHHHCCEEEeCC
Confidence 45567889999999999999999987644
No 157
>1xho_A Chorismate mutase; southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI, structural genomics; 2.20A {Clostridium thermocellum} SCOP: d.79.1.2
Probab=33.44 E-value=55 Score=25.38 Aligned_cols=44 Identities=11% Similarity=0.199 Sum_probs=29.8
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEEeeCC--CCCCCHHHHHHHHcCCCcc
Q 047978 61 KEAVSKAIKEWGQPISKITHLISCSVSG--VDMPGADYQLTKLLGLKPS 107 (320)
Q Consensus 61 ~~Aa~~aL~~ag~~~~dId~li~~s~t~--~~~p~~a~~l~~~LGl~~~ 107 (320)
.+-.++.+++.+++++||=-|+|..+.- -.+|+.+.+ ++|+..-
T Consensus 54 ~ELl~eii~~N~l~~eDIvSv~FTvT~DL~A~FPA~aaR---~~Gw~~V 99 (148)
T 1xho_A 54 QKLLKEMAEKNGLEEDDIISIIFTVTKDLDAAFPAIAAR---NMGWTST 99 (148)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEEEEECTTCCSSCTHHHHH---HTTCTTS
T ss_pred HHHHHHHHHHcCCCHHHEEEEEEEeCCccCccChHHHHH---HcCCCcc
Confidence 3345667788899999999887654433 357766555 5687753
No 158
>3sqz_A Putative hydroxymethylglutaryl-COA synthase; thiolase fold, HMG_COA synthase, transferase; HET: COA; 1.20A {Streptococcus mutans} PDB: 3leh_A
Probab=33.11 E-value=28 Score=32.19 Aligned_cols=29 Identities=7% Similarity=0.030 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCEEEEEe
Q 047978 57 PKLGKEAVSKAIKEWGQPISKITHLISCS 85 (320)
Q Consensus 57 ~~la~~Aa~~aL~~ag~~~~dId~li~~s 85 (320)
.+...++.+++|+++|++++|||.+++..
T Consensus 240 ~~~l~~~~~~~l~~~gl~~~Did~~v~Hq 268 (425)
T 3sqz_A 240 LDMLKTTWAEYQKRFDVSLTDFAAFCFHL 268 (425)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCSEEEECC
T ss_pred HHHHHHHHHHHHHHhCCCHHHCCEEEECC
Confidence 45567889999999999999999998654
No 159
>3he8_A Ribose-5-phosphate isomerase; CTRPI B, isomerization; 1.90A {Clostridium thermocellum} PDB: 3hee_A*
Probab=28.25 E-value=33 Score=26.79 Aligned_cols=31 Identities=26% Similarity=0.379 Sum_probs=23.0
Q ss_pred HHHHHHHHHHhchhcCCCCCCCCCceEEEEeeccchhhhh
Q 047978 270 VLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEA 309 (320)
Q Consensus 270 i~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a 309 (320)
.-..++.++.+ |....| |++++.|.|+++.|
T Consensus 45 ~a~~va~~V~~----g~~d~G-----IliCGTGiG~siaA 75 (149)
T 3he8_A 45 FGLKVAEAVKS----GECDRG-----IVICGTGLGISIAA 75 (149)
T ss_dssp HHHHHHHHHHT----TSSSEE-----EEEESSSHHHHHHH
T ss_pred HHHHHHHHHHc----CCCCEE-----EEEcCCcHHHHHHh
Confidence 33456666666 766666 99999999999875
No 160
>2v4w_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.7A {Homo sapiens} PDB: 2wya_A*
Probab=28.22 E-value=24 Score=33.08 Aligned_cols=38 Identities=8% Similarity=0.003 Sum_probs=28.7
Q ss_pred HHHHHHH----cCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCC
Q 047978 64 VSKAIKE----WGQPISKITHLISCSVSGVDMPGADYQLTKLLGLK 105 (320)
Q Consensus 64 a~~aL~~----ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~ 105 (320)
++++|++ +|+.++|||++|+.. ...-....++++||++
T Consensus 229 ~~~~l~~~~~~~gl~~~did~~v~Hq----an~rii~~~~~rL~~~ 270 (460)
T 2v4w_A 229 IQNQWKQAGSDRPFTLDDLQYMIFHT----PFCKMVQKSLARLMFN 270 (460)
T ss_dssp HHHHHHHTTCCCCCCGGGCSEEEECC----SSHHHHHHHHHHHHHH
T ss_pred HHHHHHhhccccCCCHHHhceEeecC----CchHHHHHHHHHcCCC
Confidence 7788888 899999999998754 2223456777788876
No 161
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=28.11 E-value=23 Score=29.40 Aligned_cols=59 Identities=14% Similarity=0.177 Sum_probs=39.2
Q ss_pred HHHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCCCCCCceEEEEeecc
Q 047978 239 DQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFEA 303 (320)
Q Consensus 239 ~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~ 303 (320)
+.+++.+|+++.++..+ +..||-.|.--.-+...++++.....-..... .+++++|.|.
T Consensus 32 ~~l~~~~~~~~~~iRkd---ls~~g~~G~~g~gY~v~~L~~~~~~~lg~~~~---~rV~IIGaG~ 90 (211)
T 2dt5_A 32 EQLGGLAQVTAFQVRKD---LSYFGSYGTRGVGYTVPVLKRELRHILGLNRK---WGLCIVGMGR 90 (211)
T ss_dssp HHHHHHHTSCHHHHHHH---HHHTTCCCCTTTCEEHHHHHHHHHHHHTTTSC---EEEEEECCSH
T ss_pred HHHHHHhCCCHHHeech---HHHHHHhcCCceeEEhHHHHHHHHHHhCcCCC---CEEEEECccH
Confidence 78899999999999987 67778887776665555444431000012223 6788888883
No 162
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=27.68 E-value=21 Score=29.71 Aligned_cols=63 Identities=11% Similarity=0.172 Sum_probs=37.2
Q ss_pred HHHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHHHHhchhcCCCCCCCCCceEEEEeec-cchhh
Q 047978 239 DQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEMRKRSVEEGKATTGEELEWGVLLGFE-AGLTV 307 (320)
Q Consensus 239 ~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G-~G~~~ 307 (320)
+.+++.+|+++.++..+ +..||..|.--.-+...++++.....-..... .+++++|.| .|-..
T Consensus 37 ~~l~~~~~~~~~~iRkd---ls~fg~~G~~g~gY~v~~L~~~~~~~lg~~~~---~rV~IIGAG~~G~~L 100 (215)
T 2vt3_A 37 AELSDAVKVDSATIRRD---FSYFGALGKKGYGYNVDYLLSFFRKTLDQDEM---TDVILIGVGNLGTAF 100 (215)
T ss_dssp HHHHHHHCCCHHHHHHH---HHHTTCCC-----EEHHHHHHHHHHHHHHC------CEEEECCSHHHHHH
T ss_pred HHHHHHhCCCHHHeech---HHHHHHhcCCcceEEhHHHHHHHHHHhCcCCC---CEEEEEccCHHHHHH
Confidence 78899999999999987 77788888877776665554431000001222 578999888 34433
No 163
>3ph3_A Ribose-5-phosphate isomerase; alpha-beta-alpha sandwich fold; HET: RB5; 2.07A {Clostridium thermocellum} SCOP: c.121.1.1 PDB: 3ph4_A*
Probab=26.96 E-value=36 Score=27.20 Aligned_cols=30 Identities=27% Similarity=0.390 Sum_probs=22.9
Q ss_pred HHHHHHHHHhchhcCCCCCCCCCceEEEEeeccchhhhh
Q 047978 271 LFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEA 309 (320)
Q Consensus 271 ~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a 309 (320)
-..++.++.+ |....| |++++.|.|+++.|
T Consensus 66 a~~va~~V~~----g~~d~G-----IliCGTGiG~sIaA 95 (169)
T 3ph3_A 66 GLKVAEAVKS----GECDRG-----IVICGTGLGISIAA 95 (169)
T ss_dssp HHHHHHHHHT----TSSSEE-----EEEESSSHHHHHHH
T ss_pred HHHHHHHHHc----CCCCEE-----EEEcCCcHHHHHHh
Confidence 3456667776 766666 99999999999876
No 164
>3s5p_A Ribose 5-phosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.30A {Giardia lamblia}
Probab=26.91 E-value=37 Score=27.02 Aligned_cols=30 Identities=20% Similarity=0.200 Sum_probs=22.9
Q ss_pred HHHHHHHHHhchhcCCCCCCCCCceEEEEeeccchhhhh
Q 047978 271 LFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEA 309 (320)
Q Consensus 271 ~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a 309 (320)
-..++.++.+ |....| |++++.|.|+++.|
T Consensus 67 a~~va~~V~~----g~~d~G-----IliCGTGiG~sIaA 96 (166)
T 3s5p_A 67 AKIGCEAVTS----GRADCC-----ILVCGTGIGISIAA 96 (166)
T ss_dssp HHHHHHHHHT----TSCSEE-----EEEESSSHHHHHHH
T ss_pred HHHHHHHHHc----CCCcEE-----EEEcCCcHHHHHHh
Confidence 3456677776 766666 99999999999876
No 165
>1o1x_A Ribose-5-phosphate isomerase RPIB; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.90A {Thermotoga maritima} SCOP: c.121.1.1
Probab=26.18 E-value=38 Score=26.65 Aligned_cols=30 Identities=20% Similarity=0.172 Sum_probs=22.5
Q ss_pred HHHHHHHHHhchhcCCCCCCCCCceEEEEeeccchhhhh
Q 047978 271 LFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEA 309 (320)
Q Consensus 271 ~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a 309 (320)
-...+.++.+ |....| |++++.|.|+++.|
T Consensus 58 a~~va~~V~~----g~~d~G-----IliCGTGiG~siaA 87 (155)
T 1o1x_A 58 AKKVVQSILS----NEADFG-----ILLCGTGLGMSIAA 87 (155)
T ss_dssp HHHHHHHHHT----TSCSEE-----EEEESSSHHHHHHH
T ss_pred HHHHHHHHHc----CCCceE-----EEEcCCcHHHHHHh
Confidence 3456666666 766666 99999999999876
No 166
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=25.70 E-value=51 Score=29.39 Aligned_cols=45 Identities=20% Similarity=0.327 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCC
Q 047978 60 GKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLK 105 (320)
Q Consensus 60 a~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~ 105 (320)
..+..+++|+++++.+++||.|+++.-+. ..|....+|.+.+|.+
T Consensus 316 i~~~i~~~l~~~~~~~~~i~~IvL~GG~s-~~p~l~~~l~~~~~~~ 360 (383)
T 1dkg_D 316 SIELLKVALQDAGLSVSDIDDVILVGGQT-RMPMVQKKVAEFFGKE 360 (383)
T ss_dssp HHHHHHHHHHTTTCCTTTCCEEEEESGGG-GSHHHHHHHHHHHSSC
T ss_pred HHHHHHHHHHHcCCCHhhCCEEEEecCcc-ccHHHHHHHHHHhCCC
Confidence 56678899999999999999999876554 4788889999999854
No 167
>2vvr_A Ribose-5-phosphate isomerase B; RPIB, carbohydrate metabolism, pentose phosphate pathway; 2.10A {Escherichia coli} PDB: 1nn4_A
Probab=25.05 E-value=41 Score=26.25 Aligned_cols=30 Identities=17% Similarity=0.237 Sum_probs=22.3
Q ss_pred HHHHHHHHHhchhcCCCCCCCCCceEEEEeeccchhhhh
Q 047978 271 LFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEA 309 (320)
Q Consensus 271 ~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a 309 (320)
-...+.++.+ |....| |++++.|.|+++.|
T Consensus 47 a~~va~~V~~----g~~d~G-----IliCGTGiG~siaA 76 (149)
T 2vvr_A 47 ASQVALAVAG----GEVDGG-----ILICGTGVGISIAA 76 (149)
T ss_dssp HHHHHHHHHT----TSSSEE-----EEEESSSHHHHHHH
T ss_pred HHHHHHHHHc----CCCceE-----EEEeCCcHHHHHHH
Confidence 3456666666 666666 99999999999875
No 168
>3k7p_A Ribose 5-phosphate isomerase; pentose phosphate pathway, type B ribose 5-phosphate isomera (RPIB), R5P; 1.40A {Trypanosoma cruzi} SCOP: c.121.1.0 PDB: 3k7s_A* 3k7o_A* 3k8c_A* 3m1p_A
Probab=24.91 E-value=41 Score=27.11 Aligned_cols=29 Identities=24% Similarity=0.302 Sum_probs=22.5
Q ss_pred HHHHHHHHhchhcCCCCCCCCCceEEEEeeccchhhhh
Q 047978 272 FVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEA 309 (320)
Q Consensus 272 ~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a 309 (320)
..++.++.+ |....| |++++.|.|+++.|
T Consensus 71 ~~vA~~V~~----g~~d~G-----IliCGTGiG~sIaA 99 (179)
T 3k7p_A 71 SRVAEMVAR----KEVEFG-----VLAAGSGIGMSIAA 99 (179)
T ss_dssp HHHHHHHHT----TSSSEE-----EEEESSSHHHHHHH
T ss_pred HHHHHHHHc----CCCCEE-----EEEccCcHHHhhHh
Confidence 456667776 766666 99999999999876
No 169
>2w6k_A COBE; biosynthetic protein, cobalamin, complete proteome, vitamin B12; 1.70A {Pseudomonas aeruginosa} SCOP: c.151.1.1 PDB: 2bsn_A 2w6l_A
Probab=24.77 E-value=1e+02 Score=23.77 Aligned_cols=49 Identities=12% Similarity=0.086 Sum_probs=36.7
Q ss_pred chhHHHHHHHHhhhcCCCCCCCCceEEEEcCCChhHHHHHHHHcCCCcc
Q 047978 202 ADNIDKFLAESFDQVSLNDHDWNSLFWMMHPIGPAVLDQIEGKLGLEKT 250 (320)
Q Consensus 202 ~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~~~~~~~~~~~~~lg~~~e 250 (320)
.+.+...++++|+++|+.+.++..+.=+-.-.+..-+..+++.+|+|-.
T Consensus 24 ~~~i~~ai~~aL~~~~l~~~~v~~latid~K~dE~gL~~~A~~lg~pl~ 72 (145)
T 2w6k_A 24 AEHLRALLERTLGEHGRSLAELDALASIDGKRDEPGLRQLATLLERPVH 72 (145)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGCCEEEEECSSSCCHHHHHHHHHHTSCEE
T ss_pred HHHHHHHHHHHHHHcCCCHHHcceEechHHhCCCHHHHHHHHHhCCCcE
Confidence 4667889999999999999876422334445566788899999998743
No 170
>3sgw_A Ribose 5-phosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, valley fever; 1.70A {Coccidioides immitis} PDB: 3sdw_A 3qd5_A*
Probab=24.62 E-value=41 Score=27.22 Aligned_cols=30 Identities=20% Similarity=0.308 Sum_probs=22.7
Q ss_pred HHHHHHHHHhchhcCCCCCCCCCceEEEEeeccchhhhh
Q 047978 271 LFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEA 309 (320)
Q Consensus 271 ~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a 309 (320)
-..++.++.+ |+...| |++++.|.|+++.|
T Consensus 78 a~~vA~~V~~----ge~d~G-----IliCGTGiG~sIaA 107 (184)
T 3sgw_A 78 AIQAAQLIKD----GKVDRA-----LMICGTGLGVAISA 107 (184)
T ss_dssp HHHHHHHHHT----TSCSEE-----EEEESSSHHHHHHH
T ss_pred HHHHHHHHHc----CCCcEE-----EEEcCCcHHHhhhh
Confidence 3456666666 766666 99999999999876
No 171
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=24.61 E-value=54 Score=29.59 Aligned_cols=47 Identities=13% Similarity=0.105 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCC
Q 047978 58 KLGKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLK 105 (320)
Q Consensus 58 ~la~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~ 105 (320)
+=..+..+++|+++++.+.+||.|+.+.-+. ..|.....|.+.+|.+
T Consensus 325 ~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~s-~~p~v~~~l~~~f~~~ 371 (409)
T 4gni_A 325 EGFNRLVESAVKKAGLDPLDVDEVIMSGGTS-NTPRIAANFRYIFPES 371 (409)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCCEEEEESGGG-GCHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEECCcc-ccHHHHHHHHHHcCCc
Confidence 3466788999999999999999998876544 4788889999999865
No 172
>2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A*
Probab=24.36 E-value=94 Score=28.71 Aligned_cols=44 Identities=0% Similarity=-0.084 Sum_probs=30.4
Q ss_pred chhHHHHHHHHhhhcCCCCCCCCceEEEEcC-----CChhHHHHHHHHcCC
Q 047978 202 ADNIDKFLAESFDQVSLNDHDWNSLFWMMHP-----IGPAVLDQIEGKLGL 247 (320)
Q Consensus 202 ~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~-----~~~~~~~~~~~~lg~ 247 (320)
.....++++++|+++|++++||+ .+++.. ..+..-..+++.||+
T Consensus 53 ~~La~~Aa~~aL~~agi~~~~Id--~li~~t~t~~~~~p~~a~~v~~~lgl 101 (450)
T 2f82_A 53 ISMSFNAVTSLLEKYKIDPKQIG--RLEVGSETVIDKSKSIKTFLMQLFEK 101 (450)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGEE--EEEEECCCCSCSSSCHHHHHTHHHHT
T ss_pred HHHHHHHHHHHHHHcCcCHHHCC--EEEEEecCCCCCCCcHHHHHHHHhCC
Confidence 34556788899999999998863 444322 234556777888888
No 173
>3nq4_A 6,7-dimethyl-8-ribityllumazine synthase; 30MER, icosahedral, flavodoxin like fold, transferase, DMRL riboflavin biosynthesis, drug targe; 3.50A {Salmonella typhimurium} PDB: 3mk3_A
Probab=23.46 E-value=65 Score=25.32 Aligned_cols=47 Identities=21% Similarity=0.169 Sum_probs=35.6
Q ss_pred cccchHHHHHHHHHHHHHHcC-CCCCCcCEEEEEeeCC-CCCCCHHHHHHHH
Q 047978 52 LVPKVPKLGKEAVSKAIKEWG-QPISKITHLISCSVSG-VDMPGADYQLTKL 101 (320)
Q Consensus 52 ~~e~~~~la~~Aa~~aL~~ag-~~~~dId~li~~s~t~-~~~p~~a~~l~~~ 101 (320)
+++...+...+.|.+.|.+.| ++.++||. .+..+ +-.|-.+..+++.
T Consensus 22 fn~~I~~~Ll~gA~~~l~~~G~v~~~~i~v---~~VPGafEiP~aa~~la~~ 70 (156)
T 3nq4_A 22 FNQFINDSLLDGAVDALTRIGQVKDDNITV---VWVPGAYELPLATEALAKS 70 (156)
T ss_dssp TTHHHHHHHHHHHHHHHHHTTCCCTTSEEE---EEESSTTTHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHcCCCcccceEE---EEcCcHHHHHHHHHHHHhc
Confidence 466777888999999999999 99999883 34445 6677666666654
No 174
>2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea}
Probab=23.30 E-value=21 Score=36.58 Aligned_cols=47 Identities=13% Similarity=0.143 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCEEEEEeeCC--CCCCCHHHHHHHHcCC
Q 047978 57 PKLGKEAVSKAIKEWGQPISKITHLISCSVSG--VDMPGADYQLTKLLGL 104 (320)
Q Consensus 57 ~~la~~Aa~~aL~~ag~~~~dId~li~~s~t~--~~~p~~a~~l~~~LGl 104 (320)
.+-..++.+++|+++|++|+|||+|. ++.|. .-.|.-...|.+.+|.
T Consensus 307 ~~~q~~ai~~Al~~Agl~p~dId~ve-aHgtgT~~gD~~E~~al~~~fg~ 355 (917)
T 2hg4_A 307 GPAQQRVIRRALENAGVRAGDVDYVE-AHGTGTRLGDPIEVHALLSTYGA 355 (917)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCCEEE-CCCCCCTTHHHHHHHHHHTTTTT
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEe-eccCCCccCcHHHHHHHHHHhcc
Confidence 45567899999999999999999875 33333 2233344556666665
No 175
>2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens}
Probab=22.92 E-value=1.4e+02 Score=27.82 Aligned_cols=43 Identities=5% Similarity=-0.073 Sum_probs=26.7
Q ss_pred chhHHHHHHHHhhhcCCCCCCCCceEEEEcC-----CChhHHHHHHHHcC
Q 047978 202 ADNIDKFLAESFDQVSLNDHDWNSLFWMMHP-----IGPAVLDQIEGKLG 246 (320)
Q Consensus 202 ~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h~-----~~~~~~~~~~~~lg 246 (320)
.....++.+++|+++|++++||+ .+++.. ..+..-..+++.|+
T Consensus 74 ~~La~~Aa~~aL~~agi~~~dId--~li~~T~t~~~~~ps~a~~v~~~L~ 121 (478)
T 2p8u_A 74 NSLCMTVVQNLMERNNLSYDCIG--RLEVGTETIIDKSKSVKTNLMQLFE 121 (478)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGEE--EEEEECSCCSCSSSCHHHHHGGGTT
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC--EEEEEccCCcccCccHHHHHHHHHh
Confidence 34556788899999999999863 444332 22334455564433
No 176
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=22.76 E-value=32 Score=33.57 Aligned_cols=42 Identities=19% Similarity=0.192 Sum_probs=31.7
Q ss_pred HHHHHHHHHcCCCCCCcCEEEEEeeCC-CCCCCHHHHHHHHcCCCcc
Q 047978 62 EAVSKAIKEWGQPISKITHLISCSVSG-VDMPGADYQLTKLLGLKPS 107 (320)
Q Consensus 62 ~Aa~~aL~~ag~~~~dId~li~~s~t~-~~~p~~a~~l~~~LGl~~~ 107 (320)
.+.+-+|+++|++++|||.|+.+...+ |..|..+ ..+|+=+.
T Consensus 519 agi~~Ll~~~gi~~~di~~v~lAGaFG~~l~~~~a----~~iGllP~ 561 (631)
T 3zyy_X 519 AGVRTMLAMVDLPLEAIDRVIIAGGFGKYLNIKDA----ITIGLLPD 561 (631)
T ss_dssp HHHHHHHHHTTCCGGGCCEEEEESSSCSEEEHHHH----HHHTSSCC
T ss_pred HHHHHHHHHcCCCHHHccEEEEeccccccCCHHHH----hhcCCCCC
Confidence 345667899999999999999999998 6665533 35676543
No 177
>2vvp_A Ribose-5-phosphate isomerase B; RPIB, RV2465C, RARE sugar, carbohydrate metabolism, pentose phosphate pathway; HET: R52 5RP; 1.65A {Mycobacterium tuberculosis} SCOP: c.121.1.1 PDB: 2vvo_A* 2vvq_A* 2bes_A* 2bet_A* 1usl_A
Probab=22.67 E-value=47 Score=26.31 Aligned_cols=30 Identities=20% Similarity=0.126 Sum_probs=22.6
Q ss_pred HHHHHHHHHhchhcCCCCCCCCCceEEEEeeccchhhhh
Q 047978 271 LFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEA 309 (320)
Q Consensus 271 ~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a 309 (320)
-...+.++.+ |....| |++++.|.|+++.|
T Consensus 50 a~~va~~V~~----g~~d~G-----IliCGTGiG~siaA 79 (162)
T 2vvp_A 50 CIAAATRTVA----DPGSLG-----IVLGGSGNGEQIAA 79 (162)
T ss_dssp HHHHHHHHHH----STTCEE-----EEEESSSHHHHHHH
T ss_pred HHHHHHHHHc----CCCceE-----EEEeCCcHHHHHHH
Confidence 3456666666 766666 99999999999875
No 178
>1xho_A Chorismate mutase; southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI, structural genomics; 2.20A {Clostridium thermocellum} SCOP: d.79.1.2
Probab=22.35 E-value=54 Score=25.40 Aligned_cols=46 Identities=17% Similarity=0.271 Sum_probs=29.0
Q ss_pred echhHHHHHHHHhhhcCCCCCCCCceEEEEc---CCChhHHHHHHHHcCCC
Q 047978 201 IADNIDKFLAESFDQVSLNDHDWNSLFWMMH---PIGPAVLDQIEGKLGLE 248 (320)
Q Consensus 201 ~~~~~~~~i~~~l~~~g~~~~d~~~~~~i~h---~~~~~~~~~~~~~lg~~ 248 (320)
+.+.+.+.+++++++++++++|+ +-++|- -.+...--..++++|+.
T Consensus 49 I~~At~ELl~eii~~N~l~~eDI--vSv~FTvT~DL~A~FPA~aaR~~Gw~ 97 (148)
T 1xho_A 49 IVAETQKLLKEMAEKNGLEEDDI--ISIIFTVTKDLDAAFPAIAARNMGWT 97 (148)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGE--EEEEEEECTTCCSSCTHHHHHHTTCT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHE--EEEEEEeCCccCccChHHHHHHcCCC
Confidence 45677888899999999999986 333332 23333334445555643
No 179
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=22.10 E-value=45 Score=32.79 Aligned_cols=46 Identities=13% Similarity=0.155 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEeeCCCCCCCHHHHHHHHcCCCc
Q 047978 60 GKEAVSKAIKEWGQPISKITHLISCSVSGVDMPGADYQLTKLLGLKP 106 (320)
Q Consensus 60 a~~Aa~~aL~~ag~~~~dId~li~~s~t~~~~p~~a~~l~~~LGl~~ 106 (320)
.....+++|+++++++++||.|+++.-+. .+|.....|.+.+|.+.
T Consensus 317 i~~~i~~~L~~a~l~~~~I~~VvLvGGss-riP~v~~~l~~~fg~~~ 362 (675)
T 3d2f_A 317 VTEPVTKALAQAKLSAEEVDFVEIIGGTT-RIPTLKQSISEAFGKPL 362 (675)
T ss_dssp TTHHHHHHHHHHTCCGGGCCEEEEESGGG-GSHHHHHHHHHHHTSCE
T ss_pred HHHHHHHHHHHhCCChhhCcEEEEECCCc-cChHHHHHHHHhcCCCc
Confidence 45678899999999999999998776544 47888899999998643
No 180
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=21.36 E-value=37 Score=28.17 Aligned_cols=56 Identities=16% Similarity=0.314 Sum_probs=34.1
Q ss_pred HHHHHHcCCCcchhhhhHHHHhccCCcccchHHHHHHHH---HHhchhcCCCCCCCCCceEEEEeecc
Q 047978 239 DQIEGKLGLEKTKLRETRHVLSEYGNMASATVLFVLDEM---RKRSVEEGKATTGEELEWGVLLGFEA 303 (320)
Q Consensus 239 ~~~~~~lg~~~e~~~~~~~~~~~~Gn~~sasi~~~L~~~---~~~~~~~g~l~~G~~~d~vll~~~G~ 303 (320)
+.+++.+|+++.++.-+ +..+|..|--..-+...++ ++.-. | +... .+++++|.|.
T Consensus 36 ~ela~~~gv~~~qiRkD---ls~fg~~G~~g~GY~V~~L~~~i~~~L--g-~~~~---~~V~IvGaG~ 94 (212)
T 3keo_A 36 KQIADALGIDSATVRRD---FSYFGELGRRGFGYDVKKLMNFFAEIL--N-DHST---TNVMLVGCGN 94 (212)
T ss_dssp HHHHHHHTSCHHHHHHH---HHTTGGGTTTSSSEEHHHHHHHHHHHT--T-TTSC---EEEEEECCSH
T ss_pred HHHHHHHCCCHHHHHHH---HHHHhhcCCCCCCEEHHHHHHHHHHHh--C-CCCC---CEEEEECcCH
Confidence 78899999999999987 5445555433333333333 33211 1 2333 6789988883
No 181
>3s0r_A De novo designed helical assembly; interacts with single walled nanotube (SWNT), de novo protei; 2.45A {Artificial gene}
Probab=21.14 E-value=75 Score=16.75 Aligned_cols=14 Identities=29% Similarity=0.392 Sum_probs=10.8
Q ss_pred hHHHHHHHHHHHHH
Q 047978 56 VPKLGKEAVSKAIK 69 (320)
Q Consensus 56 ~~~la~~Aa~~aL~ 69 (320)
-..|+.+|++++|.
T Consensus 16 kaqlalqaarqalk 29 (30)
T 3s0r_A 16 KAQLALQAARQALK 29 (30)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc
Confidence 45688888988875
No 182
>2ppw_A Conserved domain protein; the putative RPIB, PSI-2, protein initiative, MCSG, structural genomics, midwest center for S genomics; HET: MSE; 2.01A {Streptococcus pneumoniae}
Probab=20.44 E-value=55 Score=27.24 Aligned_cols=30 Identities=7% Similarity=-0.117 Sum_probs=22.4
Q ss_pred HHHHHHHHHhchhcCCCCCCCCCceEEEEeeccchhhhh
Q 047978 271 LFVLDEMRKRSVEEGKATTGEELEWGVLLGFEAGLTVEA 309 (320)
Q Consensus 271 ~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a 309 (320)
-...+.++.+ |....| |++++.|.|++++|
T Consensus 56 a~~vA~~V~~----g~~d~G-----IliCGTGiG~sIAA 85 (216)
T 2ppw_A 56 GLMAAILLNT----KAVDFV-----VTGCGTGVGAMLAL 85 (216)
T ss_dssp HHHHHHHHHT----TSCSEE-----EEEESSSHHHHHHH
T ss_pred HHHHHHHHHc----CCCCeE-----EEEcCCcHHHHHHh
Confidence 3455666666 766666 89999999999876
Done!