Your job contains 1 sequence.
>047980
PHEDTNAFCSLRLSSKRCRCGLPLSRSPAAAAAAAAAAATTTTTMPTKRKTRSSVNDNTS
LSSKKSKVEPEPEACVEKEGEVAEVICENSVAGSGSSSGVKVNKNRSSSKKPIDSVKKLP
VRGEHDDDDEPEARFLGDPVPDGEARQRWPKRYEVKKQKRRNQKDDDEEEIIQAKCHYMW
AEVDGHITYDLFDDAHVKAESGEEDYICKIVEMFEAVDGTPYFTAQWYYRARDTVIESNA
HLIDQRRVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLAIPHCDYYCDMMYLLPYS
TFFSLPPENKRVSSETSSTISSDVDANECEVGEPQKMDVKLLDLYSGCGAMSTGLCLGAN
LAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWEKLCISFSLIARKD
PQQQLYSFNDDGESEEDDDNGNVEDESEDDSEIFEVEKILKICYGDPKEIKKRGLYLKVR
WRNYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNR
FRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNY
QVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAYD
EGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQCFIRLRKDGKKLWFN
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 047980
(718 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2205015 - symbol:CMT3 "chromomethylase 3" spec... 1573 8.3e-164 2
TAIR|locus:2117104 - symbol:CMT2 "chromomethylase 2" spec... 1374 1.9e-140 1
TAIR|locus:2025787 - symbol:CMT1 "chromomethylase 1" spec... 1359 7.2e-139 1
ZFIN|ZDB-GENE-990714-15 - symbol:dnmt1 "DNA (cytosine-5-)... 328 2.4e-34 3
UNIPROTKB|Q92072 - symbol:DNMT1 "DNA (cytosine-5)-methylt... 319 1.6e-33 4
UNIPROTKB|Q7Y1I7 - symbol:MET1A "DNA (cytosine-5)-methylt... 348 1.8e-33 2
TAIR|locus:2140892 - symbol:MEE57 "maternal effect embryo... 327 5.2e-33 3
MGI|MGI:94912 - symbol:Dnmt1 "DNA methyltransferase (cyto... 328 7.1e-32 4
TAIR|locus:2155959 - symbol:MET1 "methyltransferase 1" sp... 337 2.1e-31 3
UNIPROTKB|P26358 - symbol:DNMT1 "DNA (cytosine-5)-methylt... 322 6.2e-31 3
UNIPROTKB|F5GX68 - symbol:DNMT1 "Cytosine-specific methyl... 322 6.2e-31 3
TAIR|locus:2122313 - symbol:AT4G08990 species:3702 "Arabi... 328 8.6e-31 2
UNIPROTKB|E2RHC6 - symbol:DNMT1 "Cytosine-specific methyl... 316 2.7e-29 5
UNIPROTKB|F1S3I5 - symbol:DNMT1 "Cytosine-specific methyl... 318 2.4e-28 2
RGD|620979 - symbol:Dnmt1 "DNA (cytosine-5-)-methyltransf... 304 7.6e-28 4
UNIPROTKB|Q9Z330 - symbol:Dnmt1 "DNA (cytosine-5)-methylt... 304 7.6e-28 4
UNIPROTKB|Q24K09 - symbol:DNMT1 "DNA (cytosine-5)-methylt... 312 3.3e-27 3
UNIPROTKB|K7ENW7 - symbol:DNMT1 "DNA (cytosine-5)-methylt... 257 1.4e-19 1
UNIPROTKB|D4A8Z6 - symbol:Dnmt1 "Cytosine-specific methyl... 228 1.7e-19 4
TIGR_CMR|SPO_1049 - symbol:SPO_1049 "DNA methylase, C-5 c... 165 4.0e-11 2
UNIPROTKB|F1PAS9 - symbol:DNMT1 "Uncharacterized protein"... 154 1.1e-07 1
UNIPROTKB|E2RM86 - symbol:TRDMT1 "Uncharacterized protein... 103 5.5e-06 2
UNIPROTKB|O14717 - symbol:TRDMT1 "tRNA (cytosine(38)-C(5)... 104 1.4e-05 2
MGI|MGI:1274787 - symbol:Trdmt1 "tRNA aspartic acid methy... 99 7.3e-05 2
ZFIN|ZDB-GENE-041008-138 - symbol:trdmt1 "tRNA aspartic a... 109 0.00012 2
RGD|1306292 - symbol:Trdmt1 "tRNA aspartic acid methyltra... 99 0.00020 2
UNIPROTKB|F1NJ02 - symbol:TRDMT1 "Uncharacterized protein... 93 0.00036 2
>TAIR|locus:2205015 [details] [associations]
symbol:CMT3 "chromomethylase 3" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0006306 "DNA methylation"
evidence=IEA;RCA;IMP] [GO:0006342 "chromatin silencing"
evidence=IGI;RCA] [GO:0010425 "DNA methylation on cytosine within a
CNG sequence" evidence=IMP] [GO:0045814 "negative regulation of
gene expression, epigenetic" evidence=IGI] [GO:0003886 "DNA
(cytosine-5-)-methyltransferase activity" evidence=IMP] [GO:0010069
"zygote asymmetric cytokinesis in embryo sac" evidence=IMP]
[GO:0051567 "histone H3-K9 methylation" evidence=IGI;RCA]
[GO:0006260 "DNA replication" evidence=RCA] [GO:0006261
"DNA-dependent DNA replication" evidence=RCA] [GO:0006270 "DNA
replication initiation" evidence=RCA] [GO:0006275 "regulation of
DNA replication" evidence=RCA] [GO:0006346 "methylation-dependent
chromatin silencing" evidence=RCA] [GO:0008283 "cell proliferation"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0016458 "gene silencing" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0031047
"gene silencing by RNA" evidence=RCA] [GO:0031048 "chromatin
silencing by small RNA" evidence=RCA] [GO:0034968 "histone lysine
methylation" evidence=RCA] [GO:0051726 "regulation of cell cycle"
evidence=RCA] InterPro:IPR000953 InterPro:IPR001025
InterPro:IPR001525 InterPro:IPR018117 Pfam:PF00145 Pfam:PF01426
PRINTS:PR00105 PROSITE:PS00094 PROSITE:PS50013 PROSITE:PS51038
SMART:SM00298 SMART:SM00439 Pfam:PF00385 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0006351
GO:GO:0006342 GO:GO:0051567 InterPro:IPR016197 SUPFAM:SSF54160
EMBL:AC013289 InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
eggNOG:COG0270 KO:K00558 GO:GO:0003886 InterPro:IPR025821
PANTHER:PTHR10629 TIGRFAMs:TIGR00675 EMBL:AF383170 EMBL:AF364174
IPI:IPI00534552 PIR:G96719 RefSeq:NP_177135.1 UniGene:At.35376
ProteinModelPortal:Q94F88 SMR:Q94F88 STRING:Q94F88 REBASE:4853
PaxDb:Q94F88 PRIDE:Q94F88 EnsemblPlants:AT1G69770.1 GeneID:843313
KEGG:ath:AT1G69770 TAIR:At1g69770 HOGENOM:HOG000082844
InParanoid:Q94F88 OMA:EWEKLCI PhylomeDB:Q94F88
ProtClustDB:CLSN2913566 Genevestigator:Q94F88 GermOnline:AT1G69770
GO:GO:0010425 GO:GO:0010069 Uniprot:Q94F88
Length = 839
Score = 1573 (558.8 bits), Expect = 8.3e-164, Sum P(2) = 8.3e-164
Identities = 323/613 (52%), Positives = 404/613 (65%)
Query: 115 SVKKLPVRGEHDDDDEPEARFLGDPVPDGEARQRWPKRY---EVXXXXXXXXXXXXEEE- 170
+VK+ PV ++ ++ ARFL +P+P+ EA+ WP RY EV ++E
Sbjct: 31 TVKEEPVTVV-EEGEKHVARFLDEPIPESEAKSTWPDRYKPIEVQPPKASSRKKTKDDEK 89
Query: 171 --IIQAKCHYMWAEVDGHITYDLFDDAHVKAESGEEDYICKIVEMFEAVDGTPYFTAQWY 228
II+A+CHY A VD Y+L DDA+V++ G++ +ICKI+EMFE +G YFTA+W+
Sbjct: 90 VEIIRARCHYRRAIVDERQIYELNDDAYVQSGEGKDPFICKIIEMFEGANGKLYFTARWF 149
Query: 229 YRARDTVIESNAHLIDQRRVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLAIPHCD 288
YR DTV++ LI ++RVFFSEIQ+ N L L KKLNI +PLN + + A +CD
Sbjct: 150 YRPSDTVMKEFEILIKKKRVFFSEIQDTNELGLLEKKLNILMIPLNENTKETIPATENCD 209
Query: 289 YYCDMMYLLPYSTFFSLPPENKRVXXXXXXXXXXDVDANE-----CEVGE-PQKMD---- 338
++CDM Y LPY TF ++ E + D D E E+GE Q+ +
Sbjct: 210 FFCDMNYFLPYDTFEAIQQETM-MAISESSTISSDTDIREGAAAISEIGECSQETEGHKK 268
Query: 339 VKLLDLYSGCGAMSTXXXXXXXXXXXXXVTRWAVDINEYACQSLKLNHPETEVRNESAED 398
LLDLYSGCGAMST VT+WAVD+N +AC+SL+ NHPET VRN +AED
Sbjct: 269 ATLLDLYSGCGAMSTGLCMGAQLSGLNLVTKWAVDMNAHACKSLQHNHPETNVRNMTAED 328
Query: 399 FLTLLREWEKLCISFSLIARKDPQQQLYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK 458
FL LL+EWEKLCI FSL R P + Y K
Sbjct: 329 FLFLLKEWEKLCIHFSL--RNSPNSEEYANLHGLNNVEDNEDVSEESENEDDGEVFTVDK 386
Query: 459 ILKICYGDPKEIKKRGLYLKVRWRNYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILP 518
I+ I +G PK++ KRGLYLKVRW NY S DTWEPIEGLSNC KI+EFV G+KS ILP
Sbjct: 387 IVGISFGVPKKLLKRGLYLKVRWLNYDDSHDTWEPIEGLSNCRGKIEEFVKLGYKSGILP 446
Query: 519 LPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVD 578
LPG VDV+CGGPPCQG+SG NRFRN +PL D+KNKQL+V+M+IV++LKPKFVLMENVVD
Sbjct: 447 LPGGVDVVCGGPPCQGISGHNRFRNLLDPLEDQKNKQLLVYMNIVEYLKPKFVLMENVVD 506
Query: 579 IVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALP 638
++K AKG L R+A+ RL+QMNYQVR GMMAAGAYGL QFR+R FLWGA P+E +P + LP
Sbjct: 507 MLKMAKGYLARFAVGRLLQMNYQVRNGMMAAGAYGLAQFRLRFFLWGALPSEIIPQFPLP 566
Query: 639 THDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREP 698
THD+V RG I EF+ N VAYDEG +LA KLLL+D ISDLP+V N E RDEI YD++P
Sbjct: 567 THDLVHRGNIVKEFQGNIVAYDEGHTVKLADKLLLKDVISDLPAVANSEKRDEITYDKDP 626
Query: 699 ETEFQCFIRLRKD 711
T FQ FIRLRKD
Sbjct: 627 TTPFQKFIRLRKD 639
Score = 43 (20.2 bits), Expect = 8.3e-164, Sum P(2) = 8.3e-164
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 47 TKRKTRSSVNDNTSLSSKKSK-VEPEPEACVEKEGE 81
TK T S+ + K++K V+ EP VE EGE
Sbjct: 10 TKDDTTKSIPKPKKRAPKRAKTVKEEPVTVVE-EGE 44
Score = 42 (19.8 bits), Expect = 1.1e-163, Sum P(2) = 1.1e-163
Identities = 15/41 (36%), Positives = 18/41 (43%)
Query: 45 MPTKRKTRSSVNDNTSLSSKKSKVEPEPEACVEKEGEVAEV 85
M KRK R + D+T+ S K K A KE V V
Sbjct: 1 MAPKRK-RPATKDDTTKSIPKPKKRAPKRAKTVKEEPVTVV 40
>TAIR|locus:2117104 [details] [associations]
symbol:CMT2 "chromomethylase 2" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0006306 "DNA methylation"
evidence=IEA;ISS] InterPro:IPR000953 InterPro:IPR001025
InterPro:IPR001525 Pfam:PF00145 Pfam:PF01426 PRINTS:PR00105
PROSITE:PS50013 PROSITE:PS51038 SMART:SM00298 SMART:SM00439
Pfam:PF00385 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0006355 GO:GO:0003677 EMBL:AL021711 EMBL:AL161549
GO:GO:0006351 GO:GO:0016568 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR023780 PROSITE:PS00598 eggNOG:COG0270 KO:K00558
GO:GO:0003886 GO:GO:0090116 InterPro:IPR025821 PANTHER:PTHR10629
EMBL:AF383171 EMBL:BX828439 IPI:IPI00539325 PIR:T05039
RefSeq:NP_193637.2 UniGene:At.32846 ProteinModelPortal:Q94F87
SMR:Q94F87 STRING:Q94F87 REBASE:3168 PaxDb:Q94F87 PRIDE:Q94F87
EnsemblPlants:AT4G19020.1 GeneID:827640 KEGG:ath:AT4G19020
TAIR:At4g19020 InParanoid:Q94F87 OMA:NGCQLRR PhylomeDB:Q94F87
Genevestigator:Q94F87 GermOnline:AT4G19020 Uniprot:Q94F87
Length = 1295
Score = 1374 (488.7 bits), Expect = 1.9e-140, P = 1.9e-140
Identities = 274/583 (46%), Positives = 363/583 (62%)
Query: 135 FLGDPVPDGEARQRWPKRYEVXXXXXXXXXXXXEEE----IIQAKCHYMWAEVDGHITYD 190
F+G+P+ EA++RW RYE+ E++ + +CHY A+VDGH T+
Sbjct: 523 FIGEPLSCEEAQERWRWRYELKERKSKSRGQQSEDDEDKIVANVECHYSQAKVDGH-TFS 581
Query: 191 LFDDAHVKAESGEEDYICKIVEMFEAVDGTPYFTAQWYYRARDTVIESNAHLIDQRRVFF 250
L D A++K E EE ++ +IVE F+ DG YF QW+YRA DT++E A D+RR+F+
Sbjct: 582 LGDFAYIKGEE-EETHVGQIVEFFKTTDGESYFRVQWFYRATDTIMERQATNHDKRRLFY 640
Query: 251 SEIQNDNPLECLVKKLNIARVPLNIDLEAKKLAIPHCDYYCDMMYLLPYSTFFSLPPENK 310
S + NDNP++CL+ K+ + +V + L+ + DYY DM Y + YSTF +L N
Sbjct: 641 STVMNDNPVDCLISKVTVLQVSPRVGLKPNSIK---SDYYFDMEYCVEYSTFQTL--RNP 695
Query: 311 RVXXXXXXXXXXDVDANECEVGEPQKM---DVKLLDLYSGCGAMSTXXXXXXXXXXXXXV 367
+ V E +K ++ +LDLYSGCG MST V
Sbjct: 696 KTSENKLECCADVVPTESTESILKKKSFSGELPVLDLYSGCGGMSTGLSLGAKISGVDVV 755
Query: 368 TRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWEKLCISFSLIARKDPQQQLYX 427
T+WAVD N AC+SLKLNHP T+VRN++A DFL LL+EW+KLC + + D Q
Sbjct: 756 TKWAVDQNTAACKSLKLNHPNTQVRNDAAGDFLQLLKEWDKLCKRY--VFNND---QRTD 810
Query: 428 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKILKICYGDPKEIKKRGLYLKVRWRNYGPS 487
K++ IC+GD + K GL KV W+ Y
Sbjct: 811 TLRSVNSTKETSGSSSSSDDDSDSEEYEVEKLVDICFGDHDKTGKNGLKFKVHWKGYRSD 870
Query: 488 EDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNP 547
EDTWE E LSNC + I+EFVT GFKSKILPLPG V VICGGPPCQG+SG+NR RN D+P
Sbjct: 871 EDTWELAEELSNCQDAIREFVTSGFKSKILPLPGRVGVICGGPPCQGISGYNRHRNVDSP 930
Query: 548 LADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMM 607
L DE+N+Q+IVFMDIV++LKP +VLMENVVDI++ KG LGRYAL+RL+ M YQ R+G+M
Sbjct: 931 LNDERNQQIIVFMDIVEYLKPSYVLMENVVDILRMDKGSLGRYALSRLVNMRYQARLGIM 990
Query: 608 AAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAEL 667
AG YGL QFR RVF+WGA P + LPP+ LPTHDV++R +P EFERN VAY EGQ +L
Sbjct: 991 TAGCYGLSQFRSRVFMWGAVPNKNLPPFPLPTHDVIVRYGLPLEFERNVVAYAEGQPRKL 1050
Query: 668 ARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQCFIRLRK 710
+ L+L+DAISDLP V N E R+++PY+ P+T+FQ +IR K
Sbjct: 1051 EKALVLKDAISDLPHVSNDEDREKLPYESLPKTDFQRYIRSTK 1093
>TAIR|locus:2025787 [details] [associations]
symbol:CMT1 "chromomethylase 1" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0006306 "DNA methylation"
evidence=IEA;ISS] [GO:0009294 "DNA mediated transformation"
evidence=IMP] InterPro:IPR000953 InterPro:IPR001025
InterPro:IPR001525 Pfam:PF00145 Pfam:PF01426 PRINTS:PR00105
PROSITE:PS50013 PROSITE:PS51038 SMART:SM00298 SMART:SM00439
Pfam:PF00385 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 GO:GO:0016568
InterPro:IPR016197 SUPFAM:SSF54160 GO:GO:0009294 InterPro:IPR017984
InterPro:IPR023780 InterPro:IPR023779 PRINTS:PR00504
PROSITE:PS00598 EMBL:AC011713 EMBL:AF039364 EMBL:AF039366
EMBL:AF039367 EMBL:AF039368 EMBL:AF039369 EMBL:AF039370
EMBL:AF039371 EMBL:AF039372 EMBL:AF039373 EMBL:U53501
IPI:IPI00531370 IPI:IPI00782822 PIR:H96839 RefSeq:NP_565245.1
UniGene:At.5460 ProteinModelPortal:O49139 SMR:O49139 STRING:O49139
REBASE:3262 PaxDb:O49139 PRIDE:O49139 EnsemblPlants:AT1G80740.1
GeneID:844413 KEGG:ath:AT1G80740 TAIR:At1g80740 eggNOG:COG0270
InParanoid:O49139 KO:K00558 OMA:FPDCYKL PhylomeDB:O49139
ProtClustDB:CLSN2917515 ArrayExpress:O49139 Genevestigator:O49139
GermOnline:AT1G80740 GO:GO:0003886 GO:GO:0090116 InterPro:IPR025821
PANTHER:PTHR10629 Uniprot:O49139
Length = 791
Score = 1359 (483.5 bits), Expect = 7.2e-139, P = 7.2e-139
Identities = 283/606 (46%), Positives = 367/606 (60%)
Query: 119 LPVRGEHDDDDEPEAR--FLGDPVPDGEARQRWPKRYEVXXXXXXXXXXX--------XE 168
+ R + EPE+ F G P+ E+ RWP RY+ +
Sbjct: 1 MAARNKQKKRAEPESDLCFAGKPMSVVESTIRWPHRYQSKKTKLQAPTKKPANKGGKKED 60
Query: 169 EEII-QAKCHYMWAEVDGHITYDLFDDAHVKAESGEEDYICKIVEMFEAVDGTPYFTAQW 227
EEII QAKCH+ A VDG + +L DD +V G+ +I K++E+FEA DG PY +W
Sbjct: 61 EEIIKQAKCHFDKALVDG-VLINLNDDVYVTGLPGKLKFIAKVIELFEADDGVPYCRFRW 119
Query: 228 YYRARDTVIESNAHLIDQRRVFFSEIQNDNPLECLVKKLNIARVPL-NIDLEAKKLAIPH 286
YYR DT+IE +HL+ +RVF S +NDNPL C+ K+NIA+VPL I ++ IP
Sbjct: 120 YYRPEDTLIERFSHLVQPKRVFLSNDENDNPLTCIWSKVNIAKVPLPKITSRIEQRVIPP 179
Query: 287 CDYYCDMMYLLPYSTFFSLPPENKRVXXXXXXXXXXDVDANECEVGEPQKMDVK-LLDLY 345
CDYY DM Y +PY F S + D N C E D K LLDLY
Sbjct: 180 CDYYYDMKYEVPYLNFTSADDGSD-----ASSSLSSDSALN-CF--ENLHKDEKFLLDLY 231
Query: 346 SGCGAMSTXXXXXXXXXXXXXVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLRE 405
SGCGAMST +T+W+VDIN++AC SLKLNHPETEVRNE+AEDFL LL+E
Sbjct: 232 SGCGAMSTGFCMGASISGVKLITKWSVDINKFACDSLKLNHPETEVRNEAAEDFLALLKE 291
Query: 406 WEKLCISFSLIARKDPQQQLYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKILKICYG 465
W++LC FSL++ +P + + K L I +G
Sbjct: 292 WKRLCEKFSLVSSTEPVESI-SELEDEEVEENDDIDEASTGAELEPGEFEVEKFLGIMFG 350
Query: 466 DPKEIKKRGLYLKVRWRNYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDVDV 525
DP+ ++ L L VRW+ Y S DTWEP GL NC EK+KE+V GFKS +LPLPG V
Sbjct: 351 DPQGTGEKTLQLMVRWKGYNSSYDTWEPYSGLGNCKEKLKEYVIDGFKSHLLPLPGTVYT 410
Query: 526 ICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKG 585
+CGGPPCQG+SG+NR+RN + PL D+KN+QL+VF+DI+DFLKP +VLMENVVD+++F+KG
Sbjct: 411 VCGGPPCQGISGYNRYRNNEAPLEDQKNQQLLVFLDIIDFLKPNYVLMENVVDLLRFSKG 470
Query: 586 LLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLR 645
L R+A+A + MNYQ R+GMMAAG+YGLPQ R RVFLW AQP+EKLPPY LPTH+V +
Sbjct: 471 FLARHAVASFVAMNYQTRLGMMAAGSYGLPQLRNRVFLWAAQPSEKLPPYPLPTHEVAKK 530
Query: 646 GVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPY-DREPETEFQC 704
P EF+ V + + +L L L DAISDLP V NY + D + Y D P+TEF+
Sbjct: 531 FNTPKEFKDLQVGRIQMEFLKLDNALTLADAISDLPPVTNYVANDVMDYNDAAPKTEFEN 590
Query: 705 FIRLRK 710
FI L++
Sbjct: 591 FISLKR 596
>ZFIN|ZDB-GENE-990714-15 [details] [associations]
symbol:dnmt1 "DNA (cytosine-5-)-methyltransferase 1"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0090116 "C-5 methylation of cytosine" evidence=IEA] [GO:0006306
"DNA methylation" evidence=IEA;IMP] [GO:0008168 "methyltransferase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003886 "DNA
(cytosine-5-)-methyltransferase activity" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0032776 "DNA
methylation on cytosine" evidence=IMP] [GO:0035622 "intrahepatic
bile duct development" evidence=IMP] [GO:0044030 "regulation of DNA
methylation" evidence=IMP] [GO:0031017 "exocrine pancreas
development" evidence=IMP] [GO:0048565 "digestive tract
development" evidence=IMP] [GO:0010842 "retina layer formation"
evidence=IMP] [GO:0051216 "cartilage development" evidence=IMP]
[GO:0002088 "lens development in camera-type eye" evidence=IMP]
[GO:0060042 "retina morphogenesis in camera-type eye" evidence=IMP]
[GO:0051567 "histone H3-K9 methylation" evidence=IMP] [GO:0016740
"transferase activity" evidence=IEA] [GO:0032259 "methylation"
evidence=IEA] InterPro:IPR001025 InterPro:IPR001525
InterPro:IPR002857 InterPro:IPR010506 InterPro:IPR017198
InterPro:IPR018117 Pfam:PF00145 Pfam:PF01426 Pfam:PF02008
Pfam:PF06464 PIRSF:PIRSF037404 PRINTS:PR00105 PROSITE:PS00094
PROSITE:PS00095 PROSITE:PS51038 PROSITE:PS51058 SMART:SM00439
ZFIN:ZDB-GENE-990714-15 GO:GO:0005634 GO:GO:0003677 GO:GO:0008270
GO:GO:0051216 GO:GO:0051567 GO:GO:0010842 GO:GO:0048565
GO:GO:0044030 GO:GO:0032776 GO:GO:0002088 GO:GO:0031017
GO:GO:0003886 PANTHER:PTHR10629 InterPro:IPR022702 Pfam:PF12047
GeneTree:ENSGT00390000005100 OMA:SENWAME GO:GO:0035622
EMBL:CU571160 IPI:IPI00486841 Ensembl:ENSDART00000021977
ArrayExpress:F1RCN0 Bgee:F1RCN0 Uniprot:F1RCN0
Length = 1500
Score = 328 (120.5 bits), Expect = 2.4e-34, Sum P(3) = 2.4e-34
Identities = 71/194 (36%), Positives = 109/194 (56%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP GDV+++CGGPPCQG SG NRF ++ + KN ++ ++ D+ +PKF L+ENV
Sbjct: 1095 LPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSYLSYCDYYRPKFFLLENV 1152
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F + ++ + L L++M YQ G++ AG YG+ Q R R + A P EKLP Y
Sbjct: 1153 RNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPRYP 1212
Query: 637 LPTHDVVLRGV---IPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIP 693
P H R + + E+ V+ + R + ++D +SDLP + N + EI
Sbjct: 1213 EPLHVFAPRACSLSVAVD-EKKYVSNVTRGNGGIYRTITVRDTMSDLPEIRNGAAALEIS 1271
Query: 694 YDREPETEFQCFIR 707
Y+ EP++ FQ IR
Sbjct: 1272 YNGEPQSWFQRQIR 1285
Score = 99 (39.9 bits), Expect = 2.4e-34, Sum P(3) = 2.4e-34
Identities = 25/79 (31%), Positives = 38/79 (48%)
Query: 330 EVGEPQKMDVKLLDLYSGCGAMSTXXXXXXXXXXXXXVTRWAVDINEYACQSLKLNHPET 389
E EP ++ LD++SGCG +S T WA+++ + A Q+ +LN+P T
Sbjct: 1014 EPQEPVVPKLRTLDVFSGCGGLSEGFHQAGISE-----THWAIEMWDPAAQAFRLNNPGT 1068
Query: 390 EVRNESAEDFLTLLREWEK 408
V E L L+ EK
Sbjct: 1069 TVFTEDCNVLLKLVMSGEK 1087
Score = 77 (32.2 bits), Expect = 2.4e-34, Sum P(3) = 2.4e-34
Identities = 34/151 (22%), Positives = 61/151 (40%)
Query: 119 LPVRGEHDDDDEPEARFLGDPVPDGEARQRWPKRYEVXXXXXXXXXXXXEEEIIQAKCHY 178
L V+ DD++ E L PV D + + K+ + E K +Y
Sbjct: 573 LAVKEAEDDENMDEEDVL--PVKDTKKMSQTKKKKQTKNKISWVGEPLKTEG---KKEYY 627
Query: 179 MWAEVDGHITYDLFDDAHVKAESGEED-YICKIVEMFEAVDGTPYFTAQWYYRARDTVIE 237
M V+ + ++ D V + Y+ +I +++ DG F A W+ R DTV+
Sbjct: 628 MKVRVENEVL-EVGDCVSVSPDDPSHPLYLARITALWD--DGEKMFHAHWFCRGTDTVLG 684
Query: 238 SNAHLIDQRRVFFSEIQNDNPLECLVKKLNI 268
++ D +F + D L + K+N+
Sbjct: 685 ESS---DPLELFLVDECEDMQLSFIHGKVNV 712
>UNIPROTKB|Q92072 [details] [associations]
symbol:DNMT1 "DNA (cytosine-5)-methyltransferase 1"
species:9031 "Gallus gallus" [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003886 "DNA (cytosine-5-)-methyltransferase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001025
InterPro:IPR001525 InterPro:IPR002857 InterPro:IPR010506
InterPro:IPR017198 InterPro:IPR018117 Pfam:PF00145 Pfam:PF01426
Pfam:PF02008 Pfam:PF06464 PIRSF:PIRSF037404 PRINTS:PR00105
PROSITE:PS00094 PROSITE:PS00095 PROSITE:PS51038 PROSITE:PS51058
SMART:SM00439 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 KO:K00558 GO:GO:0003886
PANTHER:PTHR10629 InterPro:IPR022702 Pfam:PF12047 CTD:1786
HOVERGEN:HBG051384 EMBL:D43920 IPI:IPI00588424 PIR:JC4172
RefSeq:NP_996835.1 UniGene:Gga.1206 ProteinModelPortal:Q92072
REBASE:3020 PRIDE:Q92072 GeneID:396011 KEGG:gga:396011
NextBio:20816074 Uniprot:Q92072
Length = 1537
Score = 319 (117.4 bits), Expect = 1.6e-33, Sum P(4) = 1.6e-33
Identities = 70/193 (36%), Positives = 108/193 (55%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P+F L+ENV
Sbjct: 1126 LPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRPRFFLLENV 1183
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F + ++ + L L++M YQ G++ AG YG+ Q R R + A P EKLP +
Sbjct: 1184 RNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIVLAAAPGEKLPMFP 1243
Query: 637 LPTHDVVLRG--VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPY 694
P H R + ++ V+ + R + ++D +SDLP + N S EI Y
Sbjct: 1244 EPLHVFAPRACQLSVVVDDKKFVSNITRTYSGPFRTITVRDTMSDLPEIRNGASALEISY 1303
Query: 695 DREPETEFQCFIR 707
+ EP++ FQ IR
Sbjct: 1304 NGEPQSWFQRQIR 1316
Score = 111 (44.1 bits), Expect = 1.6e-33, Sum P(4) = 1.6e-33
Identities = 29/85 (34%), Positives = 42/85 (49%)
Query: 329 CEVGEPQKMDVKL-----LDLYSGCGAMSTXXXXXXXXXXXXXVTRWAVDINEYACQSLK 383
CE EP+ ++KL LD++SGCG +S T WA+++ E A Q+ +
Sbjct: 1039 CEQSEPEPTELKLPKLRTLDVFSGCGGLSEGFHQAGVSE-----TLWAIEMWEPAAQAFR 1093
Query: 384 LNHPETEVRNESAEDFLTLLREWEK 408
LN+P T V E L L+ EK
Sbjct: 1094 LNNPGTTVFTEDCNVLLKLVMSGEK 1118
Score = 71 (30.1 bits), Expect = 1.6e-33, Sum P(4) = 1.6e-33
Identities = 27/110 (24%), Positives = 46/110 (41%)
Query: 206 YICKIVEMFEAVDGTPYFTAQWYYRARDTVIESNAHLIDQRRVFFSEIQNDNPLECLVKK 265
Y+ ++ M+E G F A W+ DTV+ + + D +F + D L + K
Sbjct: 687 YLARVTAMWEDSSGQ-MFHAHWFCPGSDTVLGATS---DPLELFLVDECEDMQLSYIHGK 742
Query: 266 LNIARVPLN--------IDLEAKKLAIPHCDYYCDMMYLLPYSTFFSLPP 307
+N+ P + +D+E K + Y+ M Y Y+ F PP
Sbjct: 743 VNVIYKPPSENWAMEGGLDMEIKMVEDDGRTYFYQMWYDQEYARF-ETPP 791
Score = 41 (19.5 bits), Expect = 2.0e-30, Sum P(4) = 2.0e-30
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 292 DMMYLLPYSTFFSLPP 307
D +YLLP + FS+ P
Sbjct: 848 DSVYLLPEAFSFSMKP 863
Score = 38 (18.4 bits), Expect = 1.6e-33, Sum P(4) = 1.6e-33
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 53 SSVNDNTSLSSKKSKVEPEPEA 74
SS + ++S SS S + P P A
Sbjct: 135 SSSSSSSSSSSSSSSLLPAPRA 156
>UNIPROTKB|Q7Y1I7 [details] [associations]
symbol:MET1A "DNA (cytosine-5)-methyltransferase 1A"
species:39947 "Oryza sativa Japonica Group" [GO:0010216
"maintenance of DNA methylation" evidence=ISS] [GO:0010424 "DNA
methylation on cytosine within a CG sequence" evidence=ISS]
[GO:0016458 "gene silencing" evidence=IMP] InterPro:IPR001025
InterPro:IPR001525 InterPro:IPR017198 InterPro:IPR018117
Pfam:PF00145 Pfam:PF01426 PIRSF:PIRSF037404 PRINTS:PR00105
PROSITE:PS00094 PROSITE:PS00095 PROSITE:PS51038 SMART:SM00439
GO:GO:0005634 GO:GO:0003677 GO:GO:0016458 EMBL:CM000140
eggNOG:COG0270 GO:GO:0003886 PANTHER:PTHR10629 TIGRFAMs:TIGR00675
GO:GO:0010216 EMBL:AF462029 EMBL:AB362510 EMBL:AC093713
EMBL:AK108034 ProteinModelPortal:Q7Y1I7 STRING:Q7Y1I7 REBASE:7658
Gramene:Q7Y1I7 GO:GO:0010424 InterPro:IPR022702 Pfam:PF12047
Uniprot:Q7Y1I7
Length = 1527
Score = 348 (127.6 bits), Expect = 1.8e-33, Sum P(2) = 1.8e-33
Identities = 77/196 (39%), Positives = 110/196 (56%)
Query: 513 KSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVL 572
K K LP+PG+V+ I GGPPCQG SG NRF +P + + + ++ F+ ++ +P+F L
Sbjct: 1178 KIKNLPVPGEVEFINGGPPCQGFSGMNRFNQ--SPWSKVQCEMILAFLSFAEYFRPRFFL 1235
Query: 573 MENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKL 632
+ENV + V F KG R LA L++M YQVR G++ AGAYG+ Q R R F+W A P E L
Sbjct: 1236 LENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAYGVAQSRKRAFIWAAAPGETL 1295
Query: 633 PPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELA-RKLLLQDAISDLPSVDNYESRDE 691
P + P H + T + A + A R + ++D I DLP+V+N +
Sbjct: 1296 PEWPEPMHVFASPELKITLPDGKFYAAVKSTAAGAPFRSITVRDTIGDLPAVENGAGKPT 1355
Query: 692 IPYDREPETEFQCFIR 707
I Y P + FQ IR
Sbjct: 1356 IQYGSGPVSWFQKKIR 1371
Score = 101 (40.6 bits), Expect = 1.8e-33, Sum P(2) = 1.8e-33
Identities = 44/189 (23%), Positives = 74/189 (39%)
Query: 228 YYRARDTVIESNAHLIDQRRVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKL-AIPH 286
+YR D + + A+ D R V++SE P+ + K V L DL L A+
Sbjct: 974 FYRP-DDISSTKAYSSDIREVYYSEDIISVPVVMIEGK---CEVRLKDDLPNSDLPAVVE 1029
Query: 287 CDYYCDMMYLLPYSTFFSLPPENKRVXXXXXXXXXXDVDANE-CEV---GEPQKMD---- 338
+ C+ +Y LPP + V + C++ G + D
Sbjct: 1030 HVFCCEYLYDPANGALKQLPPNVRLVTLTRKVPASKKNKGKQICDIELGGSDKPKDGQSE 1089
Query: 339 --VKLLDLYSGCGAMSTXXXXXXXXXXXXXVTRWAVDINEYACQSLKLNHPETEVRNESA 396
+ LD+++GCG +S +T+WA++ E A + NHPE V E+
Sbjct: 1090 NCLATLDIFAGCGGLSEGLQRSGLS-----LTKWAIEYEEPAGDAFGENHPEAAVFVENC 1144
Query: 397 EDFLTLLRE 405
L + +
Sbjct: 1145 NVILKAIMD 1153
Score = 49 (22.3 bits), Expect = 5.1e-28, Sum P(2) = 5.1e-28
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 278 EAKKLAIPHCDYYCDMMYLLPYSTFFSLP 306
E K+ +P +Y C +Y FFSLP
Sbjct: 847 ERKRKGLP-VEYICKSLYWPEKGGFFSLP 874
Score = 38 (18.4 bits), Expect = 7.2e-27, Sum P(2) = 7.2e-27
Identities = 7/11 (63%), Positives = 8/11 (72%)
Query: 114 DSVKKLPVRGE 124
D +K LPV GE
Sbjct: 1177 DKIKNLPVPGE 1187
>TAIR|locus:2140892 [details] [associations]
symbol:MEE57 "maternal effect embryo arrest 57"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003886 "DNA (cytosine-5-)-methyltransferase
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006306 "DNA methylation" evidence=IEA;ISS] [GO:0090116 "C-5
methylation of cytosine" evidence=IEA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=IMP] [GO:0006333
"chromatin assembly or disassembly" evidence=RCA]
InterPro:IPR001025 InterPro:IPR001525 InterPro:IPR017198
InterPro:IPR018117 Pfam:PF00145 Pfam:PF01426 PIRSF:PIRSF037404
PRINTS:PR00105 PROSITE:PS00094 PROSITE:PS00095 PROSITE:PS51038
SMART:SM00439 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0009793 EMBL:AL049656 EMBL:AL161537
eggNOG:COG0270 KO:K00558 GO:GO:0003886 PANTHER:PTHR10629
HSSP:O14717 TIGRFAMs:TIGR00675 InterPro:IPR022702 Pfam:PF12047
HOGENOM:HOG000083447 ProtClustDB:CLSN2685944 REBASE:2839
IPI:IPI00536439 PIR:T06663 RefSeq:NP_193097.1 UniGene:At.54310
ProteinModelPortal:Q9T0I1 SMR:Q9T0I1 STRING:Q9T0I1 PRIDE:Q9T0I1
EnsemblPlants:AT4G13610.1 GeneID:826994 KEGG:ath:AT4G13610
TAIR:At4g13610 InParanoid:Q9T0I1 OMA:ENWTISG PhylomeDB:Q9T0I1
ArrayExpress:Q9T0I1 Genevestigator:Q9T0I1 Uniprot:Q9T0I1
Length = 1404
Score = 327 (120.2 bits), Expect = 5.2e-33, Sum P(3) = 5.2e-33
Identities = 69/174 (39%), Positives = 97/174 (55%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LPLPG VD I GGPPCQG S NRF D + + + ++ F+ D+ +PK+ L+ENV
Sbjct: 1070 LPLPGQVDFISGGPPCQGFSRLNRF--SDGSWSKNQCQMILAFLSFADYFRPKYFLLENV 1127
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
V F +G +A L++M YQVR G++ AGAYG+ Q R R F+W A P E LP +
Sbjct: 1128 KTFVSFNEGHTFHLTVASLLEMGYQVRFGLLEAGAYGISQPRKRAFIWAAAPNEVLPEWP 1187
Query: 637 LPTHDVVLRGV-IPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESR 689
P H G IP + A + R + ++DAI DLP +++ ES+
Sbjct: 1188 EPMHVFNNPGFKIPLSQGLHYAAVQSTKFGAPFRSITVRDAIGDLPPIESGESK 1241
Score = 120 (47.3 bits), Expect = 5.2e-33, Sum P(3) = 5.2e-33
Identities = 55/225 (24%), Positives = 92/225 (40%)
Query: 207 ICKIVEMFEAVDG-TPYFTAQW--YYRARDTVIESNAHLIDQRRVFFSEIQNDNPLECLV 263
I IV++ E G T F + +YR D E A+ D + V++SE P E +
Sbjct: 830 ILDIVDLKEPKKGNTTSFEVKVRRFYRPDDVSAEE-AYASDIQEVYYSEDTYILPPEAIK 888
Query: 264 KKLNIARVPLNIDLEAKKLAIPHCDYYCDMMY--------LLPYSTFFSLPP-ENKRVXX 314
K + + ++ L + + H Y+CD Y LPY+ ++ +
Sbjct: 889 GKCEVMK-KTDMPLCREYPILDHV-YFCDRFYDSSNGCLKKLPYNMMLKFSTIKDDTLLR 946
Query: 315 XXXXXXXXDVDANECEVGEPQKMDVKLLDLYSGCGAMSTXXXXXXXXXXXXXVTRWAVDI 374
+ EV P+ + LD+++GCG +S T+WA++
Sbjct: 947 EKKTETGSAMLLKPDEV--PKGKRLATLDIFAGCGGLSYGLEKAGVSD-----TKWAIEY 999
Query: 375 NEYACQSLKLNHPETEVRNESAEDFLTLLREWEKLCISFSLIARK 419
E A Q+ K NHP+T V ++ L + W +L I+ I K
Sbjct: 1000 EEPAAQAFKQNHPKTTVFVDNCNVILRI--SWLRLLINDRAIMEK 1042
Score = 54 (24.1 bits), Expect = 3.5e-26, Sum P(3) = 3.5e-26
Identities = 17/42 (40%), Positives = 22/42 (52%)
Query: 265 KLNIARVPLNIDLEAKKLAIPHCDYYCDMMYLLPYSTFFSLP 306
KL+ AR + +AK L I +YYC +Y FFSLP
Sbjct: 713 KLDRARAE---ERKAKDLPI---EYYCKSLYSPEKGGFFSLP 748
Score = 43 (20.2 bits), Expect = 5.2e-33, Sum P(3) = 5.2e-33
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 182 EVDGHITYDLFDDAHVKAESGEEDYICKIVEMFEA 216
E+ ++ +D + E+ EED I K +E+ +A
Sbjct: 540 EIGAEEEFEEVEDVEEEDENEEEDTIQKAIEVQKA 574
>MGI|MGI:94912 [details] [associations]
symbol:Dnmt1 "DNA methyltransferase (cytosine-5) 1"
species:10090 "Mus musculus" [GO:0000792 "heterochromatin"
evidence=IDA] [GO:0003677 "DNA binding" evidence=ISO;IDA]
[GO:0003690 "double-stranded DNA binding" evidence=ISO] [GO:0003723
"RNA binding" evidence=IDA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003886 "DNA (cytosine-5-)-methyltransferase
activity" evidence=ISO;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005657
"replication fork" evidence=IDA] [GO:0005721 "centromeric
heterochromatin" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006306 "DNA methylation" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0008152 "metabolic process" evidence=IEA]
[GO:0008168 "methyltransferase activity" evidence=IDA] [GO:0008270
"zinc ion binding" evidence=IDA] [GO:0008327 "methyl-CpG binding"
evidence=ISO;IDA] [GO:0009008 "DNA-methyltransferase activity"
evidence=ISO] [GO:0010216 "maintenance of DNA methylation"
evidence=ISO;IMP] [GO:0010424 "DNA methylation on cytosine within a
CG sequence" evidence=ISO] [GO:0010468 "regulation of gene
expression" evidence=IMP] [GO:0010628 "positive regulation of gene
expression" evidence=ISO] [GO:0016458 "gene silencing"
evidence=IDA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0019904
"protein domain specific binding" evidence=ISO] [GO:0032259
"methylation" evidence=IEA] [GO:0042127 "regulation of cell
proliferation" evidence=IGI] [GO:0042826 "histone deacetylase
binding" evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045322 "unmethylated CpG binding" evidence=ISO] [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IMP;IDA] [GO:0046498 "S-adenosylhomocysteine metabolic
process" evidence=ISO] [GO:0046499 "S-adenosylmethioninamine
metabolic process" evidence=ISO] [GO:0046500 "S-adenosylmethionine
metabolic process" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=ISO] [GO:0051573 "negative regulation of
histone H3-K9 methylation" evidence=ISO] [GO:0051718 "DNA
(cytosine-5-)-methyltransferase activity, acting on CpG substrates"
evidence=ISO] [GO:0071230 "cellular response to amino acid
stimulus" evidence=IDA] [GO:0090116 "C-5 methylation of cytosine"
evidence=IDA] InterPro:IPR001025 InterPro:IPR001525
InterPro:IPR002857 InterPro:IPR010506 InterPro:IPR017198
InterPro:IPR018117 Pfam:PF00145 Pfam:PF01426 Pfam:PF02008
Pfam:PF06464 PIRSF:PIRSF037404 PRINTS:PR00105 PROSITE:PS00094
PROSITE:PS00095 PROSITE:PS51038 PROSITE:PS51058 SMART:SM00439
MGI:MGI:94912 GO:GO:0005634 GO:GO:0005737 GO:GO:0045892
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 GO:GO:0016568
GO:GO:0003723 GO:GO:0042127 GO:GO:0010628 GO:GO:0005721
GO:GO:0071230 GO:GO:0016458 GO:GO:0005657 GO:GO:0051573
GO:GO:0051571 eggNOG:COG0270 KO:K00558 GO:GO:0003886
PANTHER:PTHR10629 GO:GO:0010216 InterPro:IPR022702 Pfam:PF12047
BRENDA:2.1.1.37 CTD:1786 GeneTree:ENSGT00390000005100
HOVERGEN:HBG051384 OMA:SENWAME OrthoDB:EOG4T1HKN GO:GO:0008327
ChiTaRS:DNMT1 EMBL:X14805 EMBL:AF175432 EMBL:AF162282 EMBL:AF175431
EMBL:AF175412 EMBL:AF175413 EMBL:AF175414 EMBL:AF244089
EMBL:AF244090 EMBL:AF175416 EMBL:AF175417 EMBL:AF175418
EMBL:AF175419 EMBL:AF175420 EMBL:AF175421 EMBL:AF175422
EMBL:AF175423 EMBL:AF234317 EMBL:AF175424 EMBL:AF175425
EMBL:AF175426 EMBL:AF234318 EMBL:AF175427 EMBL:AF175428
EMBL:AF175429 EMBL:AF175430 EMBL:BC048148 EMBL:AF036007
EMBL:AF036008 EMBL:U70051 EMBL:AK013247 IPI:IPI00474974
IPI:IPI00990173 PIR:S01845 RefSeq:NP_001186360.2
RefSeq:NP_001186361.1 RefSeq:NP_001186362.1 RefSeq:NP_034196.5
UniGene:Mm.128580 PDB:3AV4 PDB:3AV5 PDB:3AV6 PDB:3PT6 PDB:3PT9
PDB:4DA4 PDBsum:3AV4 PDBsum:3AV5 PDBsum:3AV6 PDBsum:3PT6
PDBsum:3PT9 PDBsum:4DA4 ProteinModelPortal:P13864 SMR:P13864
IntAct:P13864 STRING:P13864 REBASE:2844 PhosphoSite:P13864
PaxDb:P13864 PRIDE:P13864 Ensembl:ENSMUST00000004202
Ensembl:ENSMUST00000178110 GeneID:13433 KEGG:mmu:13433
UCSC:uc009ojo.2 UCSC:uc009ojq.2 InParanoid:P13864
EvolutionaryTrace:P13864 NextBio:283859 Bgee:P13864
CleanEx:MM_DNMT1 Genevestigator:P13864
GermOnline:ENSMUSG00000004099 Uniprot:P13864
Length = 1620
Score = 328 (120.5 bits), Expect = 7.1e-32, Sum P(4) = 7.1e-32
Identities = 74/206 (35%), Positives = 111/206 (53%)
Query: 508 VTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLK 567
VT+ + LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +
Sbjct: 1206 VTNSLGQR-LPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYR 1262
Query: 568 PKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQ 627
P+F L+ENV + V + + ++ + L L++M YQ G++ AG YG+ Q R R + A
Sbjct: 1263 PRFFLLENVRNFVSYRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAA 1322
Query: 628 PTEKLPPYALPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLP 681
P EKLP + P H R V +F N G R + ++D +SDLP
Sbjct: 1323 PGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLP 1378
Query: 682 SVDNYESRDEIPYDREPETEFQCFIR 707
+ N S EIPY+ EP + FQ +R
Sbjct: 1379 EIQNGASNSEIPYNGEPLSWFQRQLR 1404
Score = 88 (36.0 bits), Expect = 7.1e-32, Sum P(4) = 7.1e-32
Identities = 30/112 (26%), Positives = 48/112 (42%)
Query: 303 FSLPPENKRVXXXXXXXXXXDVDANECEVGEPQKMD--VKL-----LDLYSGCGAMSTXX 355
F PP + R + +V EP++ + +KL LD++SGCG +S
Sbjct: 1099 FEDPPNHARSPGNKGKGKGKGKGKGKHQVSEPKEPEAAIKLPKLRTLDVFSGCGGLSEGF 1158
Query: 356 XXXXXXXXXXXVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWE 407
T WA+++ + A Q+ +LN+P T V E L L+ E
Sbjct: 1159 HQAGISE-----TLWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLLKLVMAGE 1205
Score = 65 (27.9 bits), Expect = 7.1e-32, Sum P(4) = 7.1e-32
Identities = 42/198 (21%), Positives = 79/198 (39%)
Query: 124 EHDDDDEPEARFLGDPVPDGEARQRWPKRYEVXXXXXXXXXXXXEEEIIQAKCHYMWAEV 183
E DDD+E + P P + Q K+ EE + +Y +
Sbjct: 701 EADDDEEADDDVSEMPSPK-KLHQGKKKKQNKDRISWLGQPMKIEEN----RTYYQKVSI 755
Query: 184 DGHITYDLFDDAHV-KAESGEEDYICKIVEMFEAVDGTPYFTAQWYYRARDTVIESNAHL 242
D + ++ D V +S + Y+ ++ ++E +G F A W+ DTV+ + +
Sbjct: 756 DEEML-EVGDCVSVIPDDSSKPLYLARVTALWEDKNGQMMFHAHWFCAGTDTVLGATS-- 812
Query: 243 IDQRRVFF-SEIQNDNPLECLVKKLNIA-RVPL-NIDLEA---KKLAIPHCD----YYCD 292
D +F E +N L + K+ + + P N +E + +P + Y+
Sbjct: 813 -DPLELFLVGECENMQ-LSYIHSKVKVIYKAPSENWAMEGGTDPETTLPGAEDGKTYFFQ 870
Query: 293 MMYLLPYSTFFSLPPENK 310
+ Y Y+ F S PP+ +
Sbjct: 871 LWYNQEYARFES-PPKTQ 887
Score = 42 (19.8 bits), Expect = 7.1e-32, Sum P(4) = 7.1e-32
Identities = 11/42 (26%), Positives = 21/42 (50%)
Query: 46 PTKRKTRS-SVNDNTSLSSKKSKVEPEPEACVEKEGEVAEVI 86
PTKRK + S N++ S+ + + + + V+ E A +
Sbjct: 173 PTKRKPKEESEEGNSAESAAEERDQDKKRRVVDTESGAAAAV 214
Score = 38 (18.4 bits), Expect = 4.1e-29, Sum P(4) = 4.1e-29
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 209 KIVEMFEAVDGTPY 222
K++E E VDG Y
Sbjct: 913 KVLEQIEEVDGRVY 926
>TAIR|locus:2155959 [details] [associations]
symbol:MET1 "methyltransferase 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006306 "DNA methylation" evidence=IEA;RCA] [GO:0090116 "C-5
methylation of cytosine" evidence=IEA] [GO:0010069 "zygote
asymmetric cytokinesis in embryo sac" evidence=IMP] [GO:0006349
"regulation of gene expression by genetic imprinting" evidence=IMP]
[GO:0010216 "maintenance of DNA methylation" evidence=IMP]
[GO:0010424 "DNA methylation on cytosine within a CG sequence"
evidence=IMP] [GO:0009294 "DNA mediated transformation"
evidence=IMP] [GO:0006260 "DNA replication" evidence=RCA]
[GO:0006261 "DNA-dependent DNA replication" evidence=RCA]
[GO:0006333 "chromatin assembly or disassembly" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0008283 "cell
proliferation" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0016458 "gene silencing"
evidence=RCA] [GO:0034968 "histone lysine methylation"
evidence=RCA] [GO:0051567 "histone H3-K9 methylation" evidence=RCA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0008168
"methyltransferase activity" evidence=TAS] [GO:0009910 "negative
regulation of flower development" evidence=IMP] InterPro:IPR001025
InterPro:IPR001525 InterPro:IPR017198 InterPro:IPR018117
Pfam:PF00145 Pfam:PF01426 PIRSF:PIRSF037404 PRINTS:PR00105
PROSITE:PS00094 PROSITE:PS00095 PROSITE:PS51038 SMART:SM00439
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0016568 GO:GO:0009910 GO:GO:0008168 GO:GO:0006349
EMBL:AB016872 GO:GO:0009294 eggNOG:COG0270 KO:K00558 GO:GO:0003886
PANTHER:PTHR10629 TIGRFAMs:TIGR00675 GO:GO:0010069 GO:GO:0010216
GO:GO:0010424 InterPro:IPR022702 Pfam:PF12047 EMBL:L10692
EMBL:AY699012 EMBL:AK229013 EMBL:AK230148 IPI:IPI00536256
PIR:S59604 RefSeq:NP_199727.1 UniGene:At.20294
ProteinModelPortal:P34881 SMR:P34881 STRING:P34881 REBASE:11752
PaxDb:P34881 PRIDE:P34881 EnsemblPlants:AT5G49160.1 GeneID:834975
KEGG:ath:AT5G49160 TAIR:At5g49160 HOGENOM:HOG000083447
InParanoid:P34881 OMA:IWISTEL PhylomeDB:P34881
ProtClustDB:CLSN2685944 Genevestigator:P34881 GermOnline:AT5G49160
Uniprot:P34881
Length = 1534
Score = 337 (123.7 bits), Expect = 2.1e-31, Sum P(3) = 2.1e-31
Identities = 78/195 (40%), Positives = 110/195 (56%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LPLPG VD I GGPPCQG SG NRF N+ + + + + ++ F+ D+ +P++ L+ENV
Sbjct: 1183 LPLPGQVDFINGGPPCQGFSGMNRF-NQSS-WSKVQCEMILAFLSFADYFRPRYFLLENV 1240
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
V F KG + LA L++M YQVR G++ AGAYG+ Q R R F+W A P E LP +
Sbjct: 1241 RTFVSFNKGQTFQLTLASLLEMGYQVRFGILEAGAYGVSQSRKRAFIWAAAPEEVLPEWP 1300
Query: 637 LPTHDVVLRGVIPTEFERNT-VAYDEGQQAELA---RKLLLQDAISDLPSVDNYESRDEI 692
P H + GV + + + Y + L R + ++D I DLPSV+N +SR
Sbjct: 1301 EPMH---VFGVPKLKISLSQGLHYAAVRSTALGAPFRPITVRDTIGDLPSVENGDSRTNK 1357
Query: 693 PYDREPETEFQCFIR 707
Y + FQ IR
Sbjct: 1358 EYKEVAVSWFQKEIR 1372
Score = 101 (40.6 bits), Expect = 2.1e-31, Sum P(3) = 2.1e-31
Identities = 46/191 (24%), Positives = 84/191 (43%)
Query: 228 YYRARDTVIESNAHLIDQRRVFFSE---IQNDNPLE--CLVKKLNIARVPLNIDLEAKKL 282
+YR D E A+ D + ++FS+ + LE C V+K + +PL+ +
Sbjct: 974 FYRPEDVSAEK-AYASDIQELYFSQDTVVLPPGALEGKCEVRKKS--DMPLSREYPISD- 1029
Query: 283 AIPHCDYYCDM----MYLLPYSTF--FSLPPENKRVXXXXXXXXXXDVDANECEVGEPQK 336
I CD + D + LP + FS ++ + ++++ + EP K
Sbjct: 1030 HIFFCDLFFDTSKGSLKQLPANMKPKFSTIKDDTLLRKKKGKGVESEIESEIVKPVEPPK 1089
Query: 337 MDVKL--LDLYSGCGAMSTXXXXXXXXXXXXXVTRWAVDINEYACQSLKLNHPETEVRNE 394
+++L LD+++GCG +S +WA++ E A Q+ K NHPE+ V +
Sbjct: 1090 -EIRLATLDIFAGCGGLSHGLKKAGVSDA-----KWAIEYEEPAGQAFKQNHPESTVFVD 1143
Query: 395 SAEDFLTLLRE 405
+ L + E
Sbjct: 1144 NCNVILRAIME 1154
Score = 55 (24.4 bits), Expect = 1.2e-26, Sum P(3) = 1.2e-26
Identities = 13/30 (43%), Positives = 16/30 (53%)
Query: 277 LEAKKLAIPHCDYYCDMMYLLPYSTFFSLP 306
LE K +P +YYC +Y FFSLP
Sbjct: 841 LERKVKDLP-TEYYCKSLYSPERGGFFSLP 869
Score = 51 (23.0 bits), Expect = 5.6e-27, Sum P(2) = 5.6e-27
Identities = 15/39 (38%), Positives = 22/39 (56%)
Query: 45 MPTKRKTR-SSVNDNTSLSSKKSK-VEPEPEACVEKEGE 81
+P K + S++ D+T L KK K VE E E+ + K E
Sbjct: 1048 LPANMKPKFSTIKDDTLLRKKKGKGVESEIESEIVKPVE 1086
Score = 37 (18.1 bits), Expect = 2.1e-31, Sum P(3) = 2.1e-31
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 114 DSVKKLPVRGEHDDDDEPEARFLGDPVPD 142
D V++ GE + ++E E D VP+
Sbjct: 660 DEVEEEGGNGEEEVEEEGENGLTEDTVPE 688
>UNIPROTKB|P26358 [details] [associations]
symbol:DNMT1 "DNA (cytosine-5)-methyltransferase 1"
species:9606 "Homo sapiens" [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005657 "replication
fork" evidence=IEA] [GO:0005721 "centromeric heterochromatin"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008327 "methyl-CpG binding" evidence=IEA] [GO:0016458 "gene
silencing" evidence=IEA] [GO:0042127 "regulation of cell
proliferation" evidence=IEA] [GO:0071230 "cellular response to
amino acid stimulus" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010628 "positive regulation of gene expression" evidence=IMP]
[GO:0051573 "negative regulation of histone H3-K9 methylation"
evidence=IMP] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=IMP] [GO:0010216 "maintenance of DNA
methylation" evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0009008 "DNA-methyltransferase activity" evidence=IDA]
[GO:0003886 "DNA (cytosine-5-)-methyltransferase activity"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0006306 "DNA
methylation" evidence=TAS] InterPro:IPR001025 InterPro:IPR001525
InterPro:IPR002857 InterPro:IPR010506 InterPro:IPR017198
InterPro:IPR018117 Pfam:PF00145 Pfam:PF01426 Pfam:PF02008
Pfam:PF06464 PIRSF:PIRSF037404 PRINTS:PR00105 PROSITE:PS00094
PROSITE:PS00095 PROSITE:PS51038 PROSITE:PS51058 SMART:SM00439
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 GO:GO:0003723 GO:GO:0042127
GO:GO:0000122 GO:GO:0010628 GO:GO:0005721 GO:GO:0071230
GO:GO:0016458 Orphanet:36386 GO:GO:0005657 GO:GO:0051573
GO:GO:0051571 EMBL:AC020931 DrugBank:DB00928 DrugBank:DB01035
eggNOG:COG0270 KO:K00558 GO:GO:0003886 PANTHER:PTHR10629
DrugBank:DB01181 GO:GO:0010216 DrugBank:DB01262 InterPro:IPR022702
Pfam:PF12047 BRENDA:2.1.1.37 CTD:1786 HOGENOM:HOG000082497
HOVERGEN:HBG051384 OMA:SENWAME OrthoDB:EOG4T1HKN GO:GO:0008327
EMBL:X63692 EMBL:AF180682 EMBL:AC010077 EMBL:AC011511 EMBL:BC126227
EMBL:BC144093 EMBL:AH008119 IPI:IPI00031519 IPI:IPI00220918
IPI:IPI00220919 PIR:S22610 RefSeq:NP_001124295.1 RefSeq:NP_001370.1
UniGene:Hs.202672 PDB:3EPZ PDB:3PTA PDB:3SWR PDBsum:3EPZ
PDBsum:3PTA PDBsum:3SWR ProteinModelPortal:P26358 SMR:P26358
DIP:DIP-39693N IntAct:P26358 MINT:MINT-232346 STRING:P26358
REBASE:1161 PhosphoSite:P26358 DMDM:12231019 PaxDb:P26358
PRIDE:P26358 Ensembl:ENST00000340748 Ensembl:ENST00000359526
GeneID:1786 KEGG:hsa:1786 UCSC:uc002mng.3 UCSC:uc002mnh.3
GeneCards:GC19M010244 HGNC:HGNC:2976 HPA:CAB005876 HPA:HPA002694
MIM:126375 MIM:614116 neXtProt:NX_P26358 PharmGKB:PA27443
BindingDB:P26358 ChEMBL:CHEMBL1993 ChiTaRS:DNMT1 DrugBank:DB01099
EvolutionaryTrace:P26358 GenomeRNAi:1786 NextBio:7267
ArrayExpress:P26358 Bgee:P26358 CleanEx:HS_DNMT1
Genevestigator:P26358 GermOnline:ENSG00000130816 Uniprot:P26358
Length = 1616
Score = 322 (118.4 bits), Expect = 6.2e-31, Sum P(3) = 6.2e-31
Identities = 74/205 (36%), Positives = 110/205 (53%)
Query: 509 THGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKP 568
T + + LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P
Sbjct: 1203 TTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRP 1260
Query: 569 KFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQP 628
+F L+ENV + V F + ++ + L L++M YQ G++ AG YG+ Q R R + A P
Sbjct: 1261 RFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAP 1320
Query: 629 TEKLPPYALPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPS 682
EKLP + P H R V +F N G R + ++D +SDLP
Sbjct: 1321 GEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPE 1376
Query: 683 VDNYESRDEIPYDREPETEFQCFIR 707
V N S EI Y+ EP++ FQ +R
Sbjct: 1377 VRNGASALEISYNGEPQSWFQRQLR 1401
Score = 94 (38.1 bits), Expect = 6.2e-31, Sum P(3) = 6.2e-31
Identities = 26/84 (30%), Positives = 42/84 (50%)
Query: 329 CEVGEPQKMDVKL-----LDLYSGCGAMSTXXXXXXXXXXXXXVTRWAVDINEYACQSLK 383
CE EP+ +++KL LD++SGCG +S T WA+++ + A Q+ +
Sbjct: 1125 CEPSEPE-IEIKLPKLRTLDVFSGCGGLSEGFHQAGISD-----TLWAIEMWDPAAQAFR 1178
Query: 384 LNHPETEVRNESAEDFLTLLREWE 407
LN+P + V E L L+ E
Sbjct: 1179 LNNPGSTVFTEDCNILLKLVMAGE 1202
Score = 57 (25.1 bits), Expect = 6.2e-31, Sum P(3) = 6.2e-31
Identities = 20/95 (21%), Positives = 40/95 (42%)
Query: 175 KCHYMWAEVDGHITYDLFDDAHV-KAESGEEDYICKIVEMFEAVDGTPYFTAQWYYRARD 233
K +Y +D T ++ D V +S + Y+ ++ ++E F A W+ D
Sbjct: 744 KSYYKKVCIDAE-TLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGTD 802
Query: 234 TVIESNAHLIDQRRVFFSEIQNDNPLECLVKKLNI 268
TV+ + + D +F + D L + K+ +
Sbjct: 803 TVLGATS---DPLELFLVDECEDMQLSYIHSKVKV 834
Score = 40 (19.1 bits), Expect = 3.6e-29, Sum P(3) = 3.6e-29
Identities = 7/16 (43%), Positives = 8/16 (50%)
Query: 213 MFEAVDGTPYFTAQWY 228
+ E DG YF WY
Sbjct: 854 LLEGDDGKTYFYQLWY 869
Score = 39 (18.8 bits), Expect = 4.5e-29, Sum P(3) = 4.5e-29
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 58 NTSLSSKKSKVEPEPEACVEKEGEV 82
N K K +P+ +AC E E+
Sbjct: 1108 NKGKGKGKGKGKPKSQACEPSEPEI 1132
>UNIPROTKB|F5GX68 [details] [associations]
symbol:DNMT1 "Cytosine-specific methyltransferase"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008134 "transcription
factor binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003886 "DNA (cytosine-5-)-methyltransferase
activity" evidence=IEA] InterPro:IPR001025 InterPro:IPR001525
InterPro:IPR002857 InterPro:IPR010506 InterPro:IPR017198
InterPro:IPR018117 Pfam:PF00145 Pfam:PF01426 Pfam:PF02008
Pfam:PF06464 PIRSF:PIRSF037404 PRINTS:PR00105 PROSITE:PS00094
PROSITE:PS00095 PROSITE:PS51038 PROSITE:PS51058 SMART:SM00439
GO:GO:0005634 GO:GO:0003677 GO:GO:0008270 EMBL:AC020931
GO:GO:0003886 PANTHER:PTHR10629 InterPro:IPR022702 Pfam:PF12047
EMBL:AC010077 EMBL:AC011511 HGNC:HGNC:2976 ChiTaRS:DNMT1
IPI:IPI01011182 ProteinModelPortal:F5GX68 SMR:F5GX68 PRIDE:F5GX68
Ensembl:ENST00000540357 UCSC:uc010xld.2 ArrayExpress:F5GX68
Bgee:F5GX68 Uniprot:F5GX68
Length = 1619
Score = 322 (118.4 bits), Expect = 6.2e-31, Sum P(3) = 6.2e-31
Identities = 74/205 (36%), Positives = 110/205 (53%)
Query: 509 THGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKP 568
T + + LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P
Sbjct: 1203 TTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRP 1260
Query: 569 KFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQP 628
+F L+ENV + V F + ++ + L L++M YQ G++ AG YG+ Q R R + A P
Sbjct: 1261 RFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAP 1320
Query: 629 TEKLPPYALPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPS 682
EKLP + P H R V +F N G R + ++D +SDLP
Sbjct: 1321 GEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPE 1376
Query: 683 VDNYESRDEIPYDREPETEFQCFIR 707
V N S EI Y+ EP++ FQ +R
Sbjct: 1377 VRNGASALEISYNGEPQSWFQRQLR 1401
Score = 94 (38.1 bits), Expect = 6.2e-31, Sum P(3) = 6.2e-31
Identities = 26/84 (30%), Positives = 42/84 (50%)
Query: 329 CEVGEPQKMDVKL-----LDLYSGCGAMSTXXXXXXXXXXXXXVTRWAVDINEYACQSLK 383
CE EP+ +++KL LD++SGCG +S T WA+++ + A Q+ +
Sbjct: 1125 CEPSEPE-IEIKLPKLRTLDVFSGCGGLSEGFHQAGISD-----TLWAIEMWDPAAQAFR 1178
Query: 384 LNHPETEVRNESAEDFLTLLREWE 407
LN+P + V E L L+ E
Sbjct: 1179 LNNPGSTVFTEDCNILLKLVMAGE 1202
Score = 57 (25.1 bits), Expect = 6.2e-31, Sum P(3) = 6.2e-31
Identities = 20/95 (21%), Positives = 40/95 (42%)
Query: 175 KCHYMWAEVDGHITYDLFDDAHV-KAESGEEDYICKIVEMFEAVDGTPYFTAQWYYRARD 233
K +Y +D T ++ D V +S + Y+ ++ ++E F A W+ D
Sbjct: 744 KSYYKKVCIDAE-TLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGTD 802
Query: 234 TVIESNAHLIDQRRVFFSEIQNDNPLECLVKKLNI 268
TV+ + + D +F + D L + K+ +
Sbjct: 803 TVLGATS---DPLELFLVDECEDMQLSYIHSKVKV 834
Score = 40 (19.1 bits), Expect = 3.6e-29, Sum P(3) = 3.6e-29
Identities = 7/16 (43%), Positives = 8/16 (50%)
Query: 213 MFEAVDGTPYFTAQWY 228
+ E DG YF WY
Sbjct: 854 LLEGDDGKTYFYQLWY 869
Score = 39 (18.8 bits), Expect = 4.5e-29, Sum P(3) = 4.5e-29
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 58 NTSLSSKKSKVEPEPEACVEKEGEV 82
N K K +P+ +AC E E+
Sbjct: 1108 NKGKGKGKGKGKPKSQACEPSEPEI 1132
>TAIR|locus:2122313 [details] [associations]
symbol:AT4G08990 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003886 "DNA
(cytosine-5-)-methyltransferase activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006306 "DNA
methylation" evidence=IEA;ISS] [GO:0090116 "C-5 methylation of
cytosine" evidence=IEA] InterPro:IPR001025 InterPro:IPR001525
InterPro:IPR017198 InterPro:IPR018117 Pfam:PF00145 Pfam:PF01426
PIRSF:PIRSF037404 PRINTS:PR00105 PROSITE:PS00094 PROSITE:PS00095
PROSITE:PS51038 SMART:SM00439 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 EMBL:AL161513
eggNOG:COG0270 KO:K00558 GO:GO:0003886 PANTHER:PTHR10629
TIGRFAMs:TIGR00675 InterPro:IPR022702 Pfam:PF12047
HOGENOM:HOG000083447 ProtClustDB:CLSN2685944 IPI:IPI00549079
PIR:G85090 RefSeq:NP_192638.1 UniGene:At.54221 HSSP:P20589
ProteinModelPortal:Q9M0S8 SMR:Q9M0S8 STRING:Q9M0S8 REBASE:2839
PaxDb:Q9M0S8 PRIDE:Q9M0S8 EnsemblPlants:AT4G08990.1 GeneID:826477
KEGG:ath:AT4G08990 TAIR:At4g08990 InParanoid:Q9M0S8 OMA:YRISMER
PhylomeDB:Q9M0S8 ArrayExpress:Q9M0S8 Genevestigator:Q9M0S8
Uniprot:Q9M0S8
Length = 1512
Score = 328 (120.5 bits), Expect = 8.6e-31, Sum P(2) = 8.6e-31
Identities = 74/194 (38%), Positives = 104/194 (53%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LPLPG D I GGPPCQG SG NRF D + + + ++ F+ D+ +PK+ L+ENV
Sbjct: 1161 LPLPGQADFISGGPPCQGFSGMNRF--SDGSWSKVQCEMILAFLSFADYFRPKYFLLENV 1218
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
V + KG + +A L+++ YQVR G++ AG YG+ Q R RV +W A P E LP +
Sbjct: 1219 KKFVTYNKGRTFQLTMASLLEIGYQVRFGILEAGTYGVSQPRKRVIIWAASPEEVLPEWP 1278
Query: 637 LPTHDVVLRGVIPTEFERNTVAYDEGQQAELA---RKLLLQDAISDLPSVDNYESRDEIP 693
P H G R + YD + + R + ++D I DLP V+N ES+
Sbjct: 1279 EPMHVFDNPGS-KISLPRG-LHYDTVRNTKFGAPFRSITVRDTIGDLPLVENGESKINKE 1336
Query: 694 YDREPETEFQCFIR 707
Y P + FQ IR
Sbjct: 1337 YRTTPVSWFQKKIR 1350
Score = 97 (39.2 bits), Expect = 8.6e-31, Sum P(2) = 8.6e-31
Identities = 41/190 (21%), Positives = 73/190 (38%)
Query: 228 YYRARDTVIESNAHLIDQRRVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLAIPHC 287
+YR D + E A+ D + +++S P E L K + R ++ L + + H
Sbjct: 951 FYRPED-ISEEKAYASDIQELYYSHDTYILPPEALQGKCEV-RKKNDMPLCREYPILDHI 1008
Query: 288 DYYCDMMYLLPYSTFFSLPPENK-RVXXXXXXXXXXDVDANECEVGE-----------PQ 335
++C++ Y P K + + E G P+
Sbjct: 1009 -FFCEVFYDSSTGYLKQFPANMKLKFSTIKDETLLREKKGKGVETGTSSGILMKPDEVPK 1067
Query: 336 KMDVKLLDLYSGCGAMSTXXXXXXXXXXXXXVTRWAVDINEYACQSLKLNHPETEVRNES 395
+M + LD+++GCG +S T+WA++ E A + K NHPE V ++
Sbjct: 1068 EMRLATLDIFAGCGGLSHGLEKAGVSN-----TKWAIEYEEPAGHAFKQNHPEATVFVDN 1122
Query: 396 AEDFLTLLRE 405
L + E
Sbjct: 1123 CNVILRAIME 1132
Score = 55 (24.4 bits), Expect = 2.1e-26, Sum P(2) = 2.1e-26
Identities = 17/45 (37%), Positives = 22/45 (48%)
Query: 262 LVKKLNIARVPLNIDLEAKKLAIPHCDYYCDMMYLLPYSTFFSLP 306
+V KL+ AR E K +P +YYC +Y FFSLP
Sbjct: 803 VVDKLDRARAE-----ERKANGLP-TEYYCKSLYSPERGGFFSLP 841
Score = 38 (18.4 bits), Expect = 1.3e-24, Sum P(2) = 1.3e-24
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 46 PTKRKTR-SSVNDNTSLSSKKSK 67
P K + S++ D T L KK K
Sbjct: 1026 PANMKLKFSTIKDETLLREKKGK 1048
>UNIPROTKB|E2RHC6 [details] [associations]
symbol:DNMT1 "Cytosine-specific methyltransferase"
species:9615 "Canis lupus familiaris" [GO:0003886 "DNA
(cytosine-5-)-methyltransferase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001025
InterPro:IPR001525 InterPro:IPR002857 InterPro:IPR010506
InterPro:IPR017198 InterPro:IPR018117 Pfam:PF00145 Pfam:PF01426
Pfam:PF02008 Pfam:PF06464 PIRSF:PIRSF037404 PRINTS:PR00105
PROSITE:PS00094 PROSITE:PS00095 PROSITE:PS51038 PROSITE:PS51058
SMART:SM00439 GO:GO:0005634 GO:GO:0003677 GO:GO:0008270
GO:GO:0003886 PANTHER:PTHR10629 InterPro:IPR022702 Pfam:PF12047
GeneTree:ENSGT00390000005100 EMBL:AAEX03012427 EMBL:AAEX03012426
Ensembl:ENSCAFT00000028398 Uniprot:E2RHC6
Length = 1613
Score = 316 (116.3 bits), Expect = 2.7e-29, Sum P(5) = 2.7e-29
Identities = 72/197 (36%), Positives = 107/197 (54%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P++ L+ENV
Sbjct: 1210 LPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRPRYFLLENV 1267
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F + ++ + L L++M YQ G++ AG YG+ Q R R + A P EKLP +
Sbjct: 1268 RNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFP 1327
Query: 637 LPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRD 690
P H R V +F N G R + ++D +SDLP V N S
Sbjct: 1328 EPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEVRNGASAL 1383
Query: 691 EIPYDREPETEFQCFIR 707
EI Y+ EP++ FQ +R
Sbjct: 1384 EILYNGEPQSWFQRQLR 1400
Score = 92 (37.4 bits), Expect = 2.7e-29, Sum P(5) = 2.7e-29
Identities = 26/84 (30%), Positives = 41/84 (48%)
Query: 329 CEVGEPQKMDVKL-----LDLYSGCGAMSTXXXXXXXXXXXXXVTRWAVDINEYACQSLK 383
CE EP+ ++KL LD++SGCG +S T WA+++ + A Q+ +
Sbjct: 1124 CEPSEPET-EIKLPKLRTLDVFSGCGGLSEGFHQAGISE-----TLWAIEMWDPAAQAFR 1177
Query: 384 LNHPETEVRNESAEDFLTLLREWE 407
LN+P + V E L L+ E
Sbjct: 1178 LNNPGSTVFTEDCNVLLKLVMAGE 1201
Score = 50 (22.7 bits), Expect = 2.7e-29, Sum P(5) = 2.7e-29
Identities = 33/147 (22%), Positives = 60/147 (40%)
Query: 175 KCHYMWAEVDGHITYDLFDDAHV-KAESGEEDYIC--KIVEMFEAVDGTPYFTAQWYYRA 231
K +Y +D T ++ D V +S + Y+ ++ ++E F A W+
Sbjct: 741 KDYYKKVCIDSE-TLEVGDCVSVIPDDSSKPLYLASSRVTALWEDGSNGQMFHAHWFCAG 799
Query: 232 RDTVIESNAHLIDQRRVFFSEIQNDNPLECLVKKLNIA-RVPL-NIDLEA---KKLAIPH 286
DTV+ + + D +F + D L + K+ + + P N LE + I
Sbjct: 800 TDTVLGATS---DPLELFLVDECEDMQLSYIHSKVKVVYKAPSENWALEGGMDPEALITE 856
Query: 287 CD---YYCDMMYLLPYSTFFSLPPENK 310
D Y+ + Y Y+ F S PP+ +
Sbjct: 857 DDGKTYFYQLWYDQDYARFES-PPKTQ 882
Score = 41 (19.5 bits), Expect = 2.7e-29, Sum P(5) = 2.7e-29
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 48 KRKTRSSVNDNTSLSSKKSKVEPEPEACVEKEGEV 82
+++ RS + T KSK EP+ E +GE+
Sbjct: 242 EKRLRSQTKEPTP--KPKSKEEPDREGRTGLQGEM 274
Score = 39 (18.8 bits), Expect = 2.7e-29, Sum P(5) = 2.7e-29
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 121 VRGEHDDDDEPEARFLGDPVPDGEARQRWPKRYE 154
++GE D D++ E R P D A++R P+ E
Sbjct: 270 LQGEMDGDEKDEKRPRSQP-KDLAAKRR-PEEKE 301
>UNIPROTKB|F1S3I5 [details] [associations]
symbol:DNMT1 "Cytosine-specific methyltransferase"
species:9823 "Sus scrofa" [GO:0071230 "cellular response to amino
acid stimulus" evidence=IEA] [GO:0051573 "negative regulation of
histone H3-K9 methylation" evidence=IEA] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0042127 "regulation of cell proliferation" evidence=IEA]
[GO:0016458 "gene silencing" evidence=IEA] [GO:0010628 "positive
regulation of gene expression" evidence=IEA] [GO:0010216
"maintenance of DNA methylation" evidence=IEA] [GO:0008327
"methyl-CpG binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005721 "centromeric heterochromatin"
evidence=IEA] [GO:0005657 "replication fork" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003886 "DNA (cytosine-5-)-methyltransferase
activity" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] InterPro:IPR001025 InterPro:IPR001525
InterPro:IPR002857 InterPro:IPR010506 InterPro:IPR017198
InterPro:IPR018117 Pfam:PF00145 Pfam:PF01426 Pfam:PF02008
Pfam:PF06464 PIRSF:PIRSF037404 PRINTS:PR00105 PROSITE:PS00094
PROSITE:PS00095 PROSITE:PS51038 PROSITE:PS51058 SMART:SM00439
GO:GO:0005634 GO:GO:0045892 GO:GO:0008270 GO:GO:0003723
GO:GO:0042127 GO:GO:0010628 GO:GO:0005721 GO:GO:0071230
GO:GO:0016458 GO:GO:0005657 GO:GO:0051573 GO:GO:0051571
GO:GO:0003886 PANTHER:PTHR10629 GO:GO:0010216 InterPro:IPR022702
Pfam:PF12047 GeneTree:ENSGT00390000005100 OMA:SENWAME GO:GO:0008327
EMBL:CU462940 Ensembl:ENSSSCT00000014923 Uniprot:F1S3I5
Length = 1611
Score = 318 (117.0 bits), Expect = 2.4e-28, Sum P(2) = 2.4e-28
Identities = 73/206 (35%), Positives = 111/206 (53%)
Query: 508 VTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLK 567
VT+ K LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +
Sbjct: 1199 VTNSRGQK-LPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYR 1255
Query: 568 PKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQ 627
P++ L+ENV + V F + ++ + L L++M YQ G++ AG YG+ Q R R + A
Sbjct: 1256 PRYFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAA 1315
Query: 628 PTEKLPPYALPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLP 681
P E+LP + P H R V +F N G R + ++D +SDLP
Sbjct: 1316 PGEQLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLP 1371
Query: 682 SVDNYESRDEIPYDREPETEFQCFIR 707
+ N S EI Y+ EP++ FQ +R
Sbjct: 1372 EIRNGASAQEISYNGEPQSWFQRQLR 1397
Score = 85 (35.0 bits), Expect = 2.4e-28, Sum P(2) = 2.4e-28
Identities = 36/140 (25%), Positives = 57/140 (40%)
Query: 284 IPHC--DYYC---DMMYLLP-Y---STFFSLPPENKRVXXXXXXXXXXDVDANECEVGEP 334
+P C D+ D Y L Y S F PP + R + + EP
Sbjct: 1064 LPECLQDFSAGGPDRFYFLEAYNAKSKSFEDPPNHARSPGNKGKGKGKGKSRTKSQTCEP 1123
Query: 335 QKMD--VKL-----LDLYSGCGAMSTXXXXXXXXXXXXXVTRWAVDINEYACQSLKLNHP 387
+++ +KL LD++SGCG +S T WA+++ + A Q+ +LN+P
Sbjct: 1124 SELETEIKLPKLRTLDVFSGCGGLSEGFHQAGISE-----TLWAIEMWDPAAQAFRLNNP 1178
Query: 388 ETEVRNESAEDFLTLLREWE 407
+ V E L L+ E
Sbjct: 1179 GSTVFTEDCNVLLKLVMAGE 1198
Score = 59 (25.8 bits), Expect = 1.3e-25, Sum P(2) = 1.3e-25
Identities = 31/145 (21%), Positives = 58/145 (40%)
Query: 175 KCHYMWAEVDGHITYDLFDDAHV-KAESGEEDYICKIVEMFEAVDGTPYFTAQWYYRARD 233
K +Y +D T ++ D V +S + Y+ ++ ++E F A W+ D
Sbjct: 740 KIYYKKVCIDSE-TLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGID 798
Query: 234 TVIESNAHLIDQRRVFFSEIQNDNPLECLVKKLNIARVPLN--------IDLEAKKLAIP 285
TV+ + + D +F + D L + K+ + P + +D EA
Sbjct: 799 TVLGATS---DPLELFLVDECEDMQLSYIHSKVKVIYKPPSENWALEGGMDPEALMSKDD 855
Query: 286 HCDYYCDMMYLLPYSTFFSLPPENK 310
Y+ + Y Y+ F S PP+ +
Sbjct: 856 GKTYFYQLWYDQEYARFES-PPKTQ 879
>RGD|620979 [details] [associations]
symbol:Dnmt1 "DNA (cytosine-5-)-methyltransferase 1"
species:10116 "Rattus norvegicus" [GO:0000792 "heterochromatin"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA;ISO]
[GO:0003690 "double-stranded DNA binding" evidence=IDA] [GO:0003723
"RNA binding" evidence=ISO] [GO:0003886 "DNA
(cytosine-5-)-methyltransferase activity" evidence=IEA;IGI;ISO;IDA]
[GO:0005634 "nucleus" evidence=IEA;ISO;IDA] [GO:0005657
"replication fork" evidence=ISO] [GO:0005721 "centromeric
heterochromatin" evidence=ISO] [GO:0006306 "DNA methylation"
evidence=ISO;TAS] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0008168 "methyltransferase activity"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA;ISO]
[GO:0008327 "methyl-CpG binding" evidence=ISO;IDA] [GO:0008757
"S-adenosylmethionine-dependent methyltransferase activity"
evidence=TAS] [GO:0009008 "DNA-methyltransferase activity"
evidence=ISO] [GO:0010216 "maintenance of DNA methylation"
evidence=ISO;IDA] [GO:0010424 "DNA methylation on cytosine within a
CG sequence" evidence=IDA] [GO:0010468 "regulation of gene
expression" evidence=ISO] [GO:0010628 "positive regulation of gene
expression" evidence=ISO] [GO:0016458 "gene silencing"
evidence=ISO] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IPI]
[GO:0042127 "regulation of cell proliferation" evidence=ISO]
[GO:0042826 "histone deacetylase binding" evidence=IPI] [GO:0043234
"protein complex" evidence=IDA] [GO:0045322 "unmethylated CpG
binding" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0046498
"S-adenosylhomocysteine metabolic process" evidence=IDA]
[GO:0046499 "S-adenosylmethioninamine metabolic process"
evidence=IDA] [GO:0046500 "S-adenosylmethionine metabolic process"
evidence=IDA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=ISO] [GO:0051573 "negative regulation of
histone H3-K9 methylation" evidence=ISO] [GO:0051718 "DNA
(cytosine-5-)-methyltransferase activity, acting on CpG substrates"
evidence=IDA] [GO:0071230 "cellular response to amino acid
stimulus" evidence=ISO] [GO:0090116 "C-5 methylation of cytosine"
evidence=ISO] InterPro:IPR001025 InterPro:IPR001525
InterPro:IPR002857 InterPro:IPR010506 InterPro:IPR017198
InterPro:IPR018117 Pfam:PF00145 Pfam:PF01426 Pfam:PF02008
Pfam:PF06464 PIRSF:PIRSF037404 PRINTS:PR00105 PROSITE:PS00094
PROSITE:PS00095 PROSITE:PS51038 PROSITE:PS51058 SMART:SM00439
RGD:620979 GO:GO:0005634 GO:GO:0043234 GO:GO:0006355 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 GO:GO:0016568 GO:GO:0003690
GO:GO:0046500 eggNOG:COG0270 PANTHER:PTHR10629 GO:GO:0046498
GO:GO:0010216 GO:GO:0045322 GO:GO:0010424 InterPro:IPR022702
Pfam:PF12047 GO:GO:0051718 GO:GO:0046499 HOGENOM:HOG000082497
HOVERGEN:HBG051384 GO:GO:0008327 EMBL:AB012214 EMBL:AF116344
EMBL:AF116345 EMBL:D64060 EMBL:AH007612 IPI:IPI00231930
IPI:IPI00231931 IPI:IPI00231933 IPI:IPI00231934 IPI:IPI00231935
IPI:IPI00231936 IPI:IPI00231937 IPI:IPI00231938 IPI:IPI00327802
PIR:JE0378 UniGene:Rn.6955 ProteinModelPortal:Q9Z330 IntAct:Q9Z330
STRING:Q9Z330 REBASE:3019 PhosphoSite:Q9Z330 PRIDE:Q9Z330
UCSC:RGD:620979 BioCyc:MetaCyc:MONOMER-8581 ArrayExpress:Q9Z330
Genevestigator:Q9Z330 Uniprot:Q9Z330
Length = 1622
Score = 304 (112.1 bits), Expect = 7.6e-28, Sum P(4) = 7.6e-28
Identities = 69/193 (35%), Positives = 102/193 (52%)
Query: 508 VTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLK 567
VT+ + LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +
Sbjct: 1208 VTNSLGQR-LPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYR 1264
Query: 568 PKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQ 627
P+F L+ENV + V F + ++ + L L++M YQ G++ AG YG+ Q R R + A
Sbjct: 1265 PRFFLLENVRNFVSFRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAA 1324
Query: 628 PTEKLPPYALPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLP 681
P EKLP + P H R V +F N G R + ++D +SDLP
Sbjct: 1325 PGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITMRDTMSDLP 1380
Query: 682 SVDNYESRDEIPY 694
+ N S EI Y
Sbjct: 1381 EIQNGASAPEISY 1393
Score = 88 (36.0 bits), Expect = 7.6e-28, Sum P(4) = 7.6e-28
Identities = 30/112 (26%), Positives = 48/112 (42%)
Query: 303 FSLPPENKRVXXXXXXXXXXDVDANECEVGEPQKMD--VKL-----LDLYSGCGAMSTXX 355
F PP + R + +V EP++ + +KL LD++SGCG ++
Sbjct: 1101 FEDPPNHARSPGNKGKGKGKGKGKGKPQVSEPKEPEAAIKLPKLRTLDVFSGCGGLTEGF 1160
Query: 356 XXXXXXXXXXXVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWE 407
T WA+++ E A Q+ +LN+P T V E L L+ E
Sbjct: 1161 HQAGISE-----TLWAIEMWEPAAQAFRLNNPGTTVFTEDCNVLLKLVMAGE 1207
Score = 54 (24.1 bits), Expect = 7.6e-28, Sum P(4) = 7.6e-28
Identities = 33/145 (22%), Positives = 61/145 (42%)
Query: 178 YMW-AEVDGHITYDLFDDAHVKAESGEED-YICKIVEMFEAVDGTPYFTAQWYYRARDTV 235
Y W +D T ++ D V + + Y+ ++ ++E +G F A W+ DTV
Sbjct: 750 YYWKVSIDEE-TLEVGDCVSVIPDDPSKPLYLARVTALWEDKNGQ-MFHAHWFCAGTDTV 807
Query: 236 IESNAHLIDQRRVFF-SEIQNDNPLECLVKKLNIA-RVPL-NIDLEA---KKLAIPHCD- 288
+ + + D +F E +N L + K+ + R P N +E + +P +
Sbjct: 808 LGATS---DPLELFLVGECENMQ-LSYIHSKVKVIYRGPSPNWAMEGGMDPEAMLPGAED 863
Query: 289 ---YYCDMMYLLPYSTFFSLPPENK 310
Y+ Y Y+ F S PP+ +
Sbjct: 864 GKTYFYQFWYSQDYARFES-PPKTQ 887
Score = 41 (19.5 bits), Expect = 7.6e-28, Sum P(4) = 7.6e-28
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 64 KKSKVEPEPEACVEKEGE 81
K +V P + C E++GE
Sbjct: 217 KPERVRPGTQLCQEEQGE 234
Score = 38 (18.4 bits), Expect = 3.3e-26, Sum P(4) = 3.3e-26
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 209 KIVEMFEAVDGTPY 222
K++E E VDG Y
Sbjct: 913 KVLEQLEEVDGRVY 926
Score = 37 (18.1 bits), Expect = 3.5e-26, Sum P(3) = 3.5e-26
Identities = 7/13 (53%), Positives = 8/13 (61%)
Query: 46 PTKRKTRSSVNDN 58
P KR R VN+N
Sbjct: 959 PMKRSKRDPVNEN 971
Score = 37 (18.1 bits), Expect = 3.5e-26, Sum P(3) = 3.5e-26
Identities = 14/53 (26%), Positives = 26/53 (49%)
Query: 231 ARDTVIESNA-HLIDQRRVFFSEIQNDN--PLECLVKKLNIARVPLNIDLEAK 280
AR + S A L D R +++ D EC+ +KLN+ L +++++
Sbjct: 8 ARVPALASPAGSLPDHVRRRLKDLERDGLTEKECVKEKLNLLHEFLQTEIKSQ 60
>UNIPROTKB|Q9Z330 [details] [associations]
symbol:Dnmt1 "DNA (cytosine-5)-methyltransferase 1"
species:10116 "Rattus norvegicus" [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001025 InterPro:IPR001525 InterPro:IPR002857
InterPro:IPR010506 InterPro:IPR017198 InterPro:IPR018117
Pfam:PF00145 Pfam:PF01426 Pfam:PF02008 Pfam:PF06464
PIRSF:PIRSF037404 PRINTS:PR00105 PROSITE:PS00094 PROSITE:PS00095
PROSITE:PS51038 PROSITE:PS51058 SMART:SM00439 RGD:620979
GO:GO:0005634 GO:GO:0043234 GO:GO:0006355 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 GO:GO:0016568 GO:GO:0003690
GO:GO:0046500 eggNOG:COG0270 PANTHER:PTHR10629 GO:GO:0046498
GO:GO:0010216 GO:GO:0045322 GO:GO:0010424 InterPro:IPR022702
Pfam:PF12047 GO:GO:0051718 GO:GO:0046499 HOGENOM:HOG000082497
HOVERGEN:HBG051384 GO:GO:0008327 EMBL:AB012214 EMBL:AF116344
EMBL:AF116345 EMBL:D64060 EMBL:AH007612 IPI:IPI00231930
IPI:IPI00231931 IPI:IPI00231933 IPI:IPI00231934 IPI:IPI00231935
IPI:IPI00231936 IPI:IPI00231937 IPI:IPI00231938 IPI:IPI00327802
PIR:JE0378 UniGene:Rn.6955 ProteinModelPortal:Q9Z330 IntAct:Q9Z330
STRING:Q9Z330 REBASE:3019 PhosphoSite:Q9Z330 PRIDE:Q9Z330
UCSC:RGD:620979 BioCyc:MetaCyc:MONOMER-8581 ArrayExpress:Q9Z330
Genevestigator:Q9Z330 Uniprot:Q9Z330
Length = 1622
Score = 304 (112.1 bits), Expect = 7.6e-28, Sum P(4) = 7.6e-28
Identities = 69/193 (35%), Positives = 102/193 (52%)
Query: 508 VTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLK 567
VT+ + LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +
Sbjct: 1208 VTNSLGQR-LPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYR 1264
Query: 568 PKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQ 627
P+F L+ENV + V F + ++ + L L++M YQ G++ AG YG+ Q R R + A
Sbjct: 1265 PRFFLLENVRNFVSFRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAA 1324
Query: 628 PTEKLPPYALPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLP 681
P EKLP + P H R V +F N G R + ++D +SDLP
Sbjct: 1325 PGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITMRDTMSDLP 1380
Query: 682 SVDNYESRDEIPY 694
+ N S EI Y
Sbjct: 1381 EIQNGASAPEISY 1393
Score = 88 (36.0 bits), Expect = 7.6e-28, Sum P(4) = 7.6e-28
Identities = 30/112 (26%), Positives = 48/112 (42%)
Query: 303 FSLPPENKRVXXXXXXXXXXDVDANECEVGEPQKMD--VKL-----LDLYSGCGAMSTXX 355
F PP + R + +V EP++ + +KL LD++SGCG ++
Sbjct: 1101 FEDPPNHARSPGNKGKGKGKGKGKGKPQVSEPKEPEAAIKLPKLRTLDVFSGCGGLTEGF 1160
Query: 356 XXXXXXXXXXXVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWE 407
T WA+++ E A Q+ +LN+P T V E L L+ E
Sbjct: 1161 HQAGISE-----TLWAIEMWEPAAQAFRLNNPGTTVFTEDCNVLLKLVMAGE 1207
Score = 54 (24.1 bits), Expect = 7.6e-28, Sum P(4) = 7.6e-28
Identities = 33/145 (22%), Positives = 61/145 (42%)
Query: 178 YMW-AEVDGHITYDLFDDAHVKAESGEED-YICKIVEMFEAVDGTPYFTAQWYYRARDTV 235
Y W +D T ++ D V + + Y+ ++ ++E +G F A W+ DTV
Sbjct: 750 YYWKVSIDEE-TLEVGDCVSVIPDDPSKPLYLARVTALWEDKNGQ-MFHAHWFCAGTDTV 807
Query: 236 IESNAHLIDQRRVFF-SEIQNDNPLECLVKKLNIA-RVPL-NIDLEA---KKLAIPHCD- 288
+ + + D +F E +N L + K+ + R P N +E + +P +
Sbjct: 808 LGATS---DPLELFLVGECENMQ-LSYIHSKVKVIYRGPSPNWAMEGGMDPEAMLPGAED 863
Query: 289 ---YYCDMMYLLPYSTFFSLPPENK 310
Y+ Y Y+ F S PP+ +
Sbjct: 864 GKTYFYQFWYSQDYARFES-PPKTQ 887
Score = 41 (19.5 bits), Expect = 7.6e-28, Sum P(4) = 7.6e-28
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 64 KKSKVEPEPEACVEKEGE 81
K +V P + C E++GE
Sbjct: 217 KPERVRPGTQLCQEEQGE 234
Score = 38 (18.4 bits), Expect = 3.3e-26, Sum P(4) = 3.3e-26
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 209 KIVEMFEAVDGTPY 222
K++E E VDG Y
Sbjct: 913 KVLEQLEEVDGRVY 926
Score = 37 (18.1 bits), Expect = 3.5e-26, Sum P(3) = 3.5e-26
Identities = 7/13 (53%), Positives = 8/13 (61%)
Query: 46 PTKRKTRSSVNDN 58
P KR R VN+N
Sbjct: 959 PMKRSKRDPVNEN 971
Score = 37 (18.1 bits), Expect = 3.5e-26, Sum P(3) = 3.5e-26
Identities = 14/53 (26%), Positives = 26/53 (49%)
Query: 231 ARDTVIESNA-HLIDQRRVFFSEIQNDN--PLECLVKKLNIARVPLNIDLEAK 280
AR + S A L D R +++ D EC+ +KLN+ L +++++
Sbjct: 8 ARVPALASPAGSLPDHVRRRLKDLERDGLTEKECVKEKLNLLHEFLQTEIKSQ 60
>UNIPROTKB|Q24K09 [details] [associations]
symbol:DNMT1 "DNA (cytosine-5)-methyltransferase 1"
species:9913 "Bos taurus" [GO:0003886 "DNA
(cytosine-5-)-methyltransferase activity" evidence=ISS] [GO:0010216
"maintenance of DNA methylation" evidence=ISS] [GO:0005634
"nucleus" evidence=IEA] [GO:0071230 "cellular response to amino
acid stimulus" evidence=IEA] [GO:0051573 "negative regulation of
histone H3-K9 methylation" evidence=IEA] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0042127 "regulation of cell proliferation" evidence=IEA]
[GO:0016458 "gene silencing" evidence=IEA] [GO:0010628 "positive
regulation of gene expression" evidence=IEA] [GO:0008327
"methyl-CpG binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005721 "centromeric heterochromatin"
evidence=IEA] [GO:0005657 "replication fork" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] InterPro:IPR001025 InterPro:IPR001525
InterPro:IPR002857 InterPro:IPR010506 InterPro:IPR017198
InterPro:IPR018117 Pfam:PF00145 Pfam:PF01426 Pfam:PF02008
Pfam:PF06464 PIRSF:PIRSF037404 PRINTS:PR00105 PROSITE:PS00094
PROSITE:PS00095 PROSITE:PS51038 PROSITE:PS51058 SMART:SM00439
GO:GO:0005634 GO:GO:0045892 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 GO:GO:0003723 GO:GO:0042127
GO:GO:0010628 GO:GO:0005721 GO:GO:0071230 GO:GO:0016458
GO:GO:0005657 GO:GO:0051573 GO:GO:0051571 eggNOG:COG0270 KO:K00558
GO:GO:0003886 PANTHER:PTHR10629 GO:GO:0010216 InterPro:IPR022702
Pfam:PF12047 EMBL:AY244709 EMBL:AY173048 EMBL:BC114063
IPI:IPI00711805 RefSeq:NP_872592.2 UniGene:Bt.108052
UniGene:Bt.48560 ProteinModelPortal:Q24K09 STRING:Q24K09
REBASE:7406 PRIDE:Q24K09 Ensembl:ENSBTAT00000003549 GeneID:281119
KEGG:bta:281119 CTD:1786 GeneTree:ENSGT00390000005100
HOGENOM:HOG000082497 HOVERGEN:HBG051384 InParanoid:Q24K09
OMA:SENWAME OrthoDB:EOG4T1HKN NextBio:20805188 GO:GO:0008327
Uniprot:Q24K09
Length = 1611
Score = 312 (114.9 bits), Expect = 3.3e-27, Sum P(3) = 3.3e-27
Identities = 73/206 (35%), Positives = 110/206 (53%)
Query: 508 VTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLK 567
VT+ K LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +
Sbjct: 1200 VTNSRGQK-LPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYR 1256
Query: 568 PKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQ 627
P++ L+ENV + V F + ++ + L L++M YQ G++ AG YG+ Q R R + A
Sbjct: 1257 PRYFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAA 1316
Query: 628 PTEKLPPYALPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLP 681
P E LP + P H R V +F N G R + ++D +SDLP
Sbjct: 1317 PGEPLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLP 1372
Query: 682 SVDNYESRDEIPYDREPETEFQCFIR 707
+ N S EI Y+ EP++ FQ +R
Sbjct: 1373 EIRNGASALEISYNGEPQSWFQRQLR 1398
Score = 88 (36.0 bits), Expect = 3.3e-27, Sum P(3) = 3.3e-27
Identities = 36/140 (25%), Positives = 58/140 (41%)
Query: 284 IPHC--DYYC---DMMYLLP-Y---STFFSLPPENKRVXXXXXXXXXXDVDANECEVGEP 334
+P C D+ D Y L Y S F PP + R + + + EP
Sbjct: 1065 LPQCLQDFSAGGPDRFYFLEAYNAKSKSFEDPPNHARSTGNKGKGKGKGKNRTKSQTCEP 1124
Query: 335 QKMD--VKL-----LDLYSGCGAMSTXXXXXXXXXXXXXVTRWAVDINEYACQSLKLNHP 387
+++ +KL LD++SGCG +S T WA+++ + A Q+ +LN+P
Sbjct: 1125 SELETEIKLPKLRTLDVFSGCGGLSEGFHQAGISE-----TLWAIEMWDPAAQAFRLNNP 1179
Query: 388 ETEVRNESAEDFLTLLREWE 407
+ V E L L+ E
Sbjct: 1180 GSTVFTEDCNVLLKLVMAGE 1199
Score = 62 (26.9 bits), Expect = 1.6e-24, Sum P(3) = 1.6e-24
Identities = 31/145 (21%), Positives = 58/145 (40%)
Query: 175 KCHYMWAEVDGHITYDLFDDAHV-KAESGEEDYICKIVEMFEAVDGTPYFTAQWYYRARD 233
K +Y +D T ++ D V +S + Y+ ++ ++E F A W+ D
Sbjct: 741 KSYYKKVCIDSE-TLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGTD 799
Query: 234 TVIESNAHLIDQRRVFFSEIQNDNPLECLVKKLNIA-RVPLN-------IDLEAKKLAIP 285
TV+ + + D +F + D L + K+ + + P +D EA
Sbjct: 800 TVLGATS---DPLELFLVDECEDMQLSYIHSKVQVIYKAPSENWAMEGGVDPEALMSEDD 856
Query: 286 HCDYYCDMMYLLPYSTFFSLPPENK 310
Y+ + Y Y+ F S PP+ +
Sbjct: 857 GKTYFYQLWYDQDYARFES-PPKTQ 880
Score = 40 (19.1 bits), Expect = 3.0e-22, Sum P(3) = 3.0e-22
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 479 VRWRNYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLP 520
+ +N+GP + W I G GEK + F IL P
Sbjct: 451 INGKNFGPINEWW--IAGFDG-GEKALLGFSTSFAEYILMDP 489
Score = 38 (18.4 bits), Expect = 3.3e-27, Sum P(3) = 3.3e-27
Identities = 10/36 (27%), Positives = 15/36 (41%)
Query: 50 KTRSSVNDNTSLSSKKSKVEPEPEACVEKEGEVAEV 85
K + T + K K + EP+ V G AE+
Sbjct: 238 KEEKRLRSQTKEPTPKHKAKEEPDRDVRPGGAQAEM 273
Score = 38 (18.4 bits), Expect = 3.3e-27, Sum P(3) = 3.3e-27
Identities = 9/38 (23%), Positives = 16/38 (42%)
Query: 50 KTRSSVNDNTSLSSKKSKVEPEPEACVEKEGEVAEVIC 87
K +S +N + SL + E C+E + + C
Sbjct: 81 KVKSLLNKDLSLENGAHAFSREANGCLENGSQTSGEDC 118
>UNIPROTKB|K7ENW7 [details] [associations]
symbol:DNMT1 "DNA (cytosine-5)-methyltransferase 1"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006306 "DNA methylation" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] InterPro:IPR001525
Pfam:PF00145 PRINTS:PR00105 EMBL:AC020931 PANTHER:PTHR10629
EMBL:AC010077 EMBL:AC011511 HGNC:HGNC:2976 Ensembl:ENST00000588913
Uniprot:K7ENW7
Length = 389
Score = 257 (95.5 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 63/182 (34%), Positives = 94/182 (51%)
Query: 532 CQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYA 591
CQG SG NRF ++ + KN ++ F+ D+ +P+F L+ENV + V F + ++ +
Sbjct: 2 CQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLT 59
Query: 592 LARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRG----- 646
L L++M YQ G++ AG YG+ Q R R + A P EKLP + P H R
Sbjct: 60 LRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSV 119
Query: 647 -VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQCF 705
V +F N G R + ++D +SDLP V N S EI Y+ EP++ FQ
Sbjct: 120 VVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEVRNGASALEISYNGEPQSWFQRQ 175
Query: 706 IR 707
+R
Sbjct: 176 LR 177
>UNIPROTKB|D4A8Z6 [details] [associations]
symbol:Dnmt1 "Cytosine-specific methyltransferase"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003886 "DNA (cytosine-5-)-methyltransferase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001025
InterPro:IPR001525 InterPro:IPR002857 InterPro:IPR010506
InterPro:IPR017198 InterPro:IPR018117 Pfam:PF00145 Pfam:PF01426
Pfam:PF02008 Pfam:PF06464 PIRSF:PIRSF037404 PRINTS:PR00105
PROSITE:PS00094 PROSITE:PS00095 PROSITE:PS51038 PROSITE:PS51058
SMART:SM00439 GO:GO:0005634 GO:GO:0003677 GO:GO:0008270
GO:GO:0003886 PANTHER:PTHR10629 InterPro:IPR022702 Pfam:PF12047
IPI:IPI00327802 ProteinModelPortal:D4A8Z6
Ensembl:ENSRNOT00000061192 ArrayExpress:D4A8Z6 Uniprot:D4A8Z6
Length = 1616
Score = 228 (85.3 bits), Expect = 1.7e-19, Sum P(4) = 1.7e-19
Identities = 62/206 (30%), Positives = 100/206 (48%)
Query: 508 VTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLK 567
VT+ + LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ + D +
Sbjct: 1202 VTNSLGQR-LPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSLRDREE 1258
Query: 568 PKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQ 627
+ ++M ++ + + + + V + ++ AG YG+ Q R R + A
Sbjct: 1259 SEDIVMGSIPRESGWQGPMQTSMHMRCCFPVWLSVSLPLLQAGQYGVAQTRRRAIILAAA 1318
Query: 628 PTEKLPPYALPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLP 681
P EKLP + P H R V +F N G R + ++D +SDLP
Sbjct: 1319 PGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLP 1374
Query: 682 SVDNYESRDEIPYDREPETEFQCFIR 707
+ N S EI Y+ EP++ FQ +R
Sbjct: 1375 EIQNGASAPEISYNGEPQSWFQRQLR 1400
Score = 88 (36.0 bits), Expect = 1.7e-19, Sum P(4) = 1.7e-19
Identities = 30/112 (26%), Positives = 48/112 (42%)
Query: 303 FSLPPENKRVXXXXXXXXXXDVDANECEVGEPQKMD--VKL-----LDLYSGCGAMSTXX 355
F PP + R + +V EP++ + +KL LD++SGCG ++
Sbjct: 1095 FEDPPNHARSPGNKGKGKGKGKGKGKPQVSEPKEPEAAIKLPKLRTLDVFSGCGGLTEGF 1154
Query: 356 XXXXXXXXXXXVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWE 407
T WA+++ E A Q+ +LN+P T V E L L+ E
Sbjct: 1155 HQAGISE-----TLWAIEMWEPAAQAFRLNNPGTTVFTEDCNVLLKLVMAGE 1201
Score = 54 (24.1 bits), Expect = 1.7e-19, Sum P(4) = 1.7e-19
Identities = 33/145 (22%), Positives = 61/145 (42%)
Query: 178 YMW-AEVDGHITYDLFDDAHVKAESGEED-YICKIVEMFEAVDGTPYFTAQWYYRARDTV 235
Y W +D T ++ D V + + Y+ ++ ++E +G F A W+ DTV
Sbjct: 746 YYWKVSIDEE-TLEVGDCVSVIPDDPSKPLYLARVTALWEDKNGQ-MFHAHWFCAGTDTV 803
Query: 236 IESNAHLIDQRRVFF-SEIQNDNPLECLVKKLNIA-RVPL-NIDLEA---KKLAIPHCD- 288
+ + + D +F E +N L + K+ + R P N +E + +P +
Sbjct: 804 LGATS---DPLELFLVGECENMQ-LSYIHSKVKVIYRGPSPNWAMEGGMDPEAMLPGAED 859
Query: 289 ---YYCDMMYLLPYSTFFSLPPENK 310
Y+ Y Y+ F S PP+ +
Sbjct: 860 GKTYFYQFWYSQDYARFES-PPKTQ 883
Score = 43 (20.2 bits), Expect = 1.7e-19, Sum P(4) = 1.7e-19
Identities = 13/61 (21%), Positives = 22/61 (36%)
Query: 23 PLSRSPXXXXXXXXXXXXXXXXMPTKRKTRSSVNDNTSLSS--KKSKVEPEPEACVEKEG 80
P R P +K R + ++ + S K +V P + C E++G
Sbjct: 172 PAKRKPKEDSEKGNANESAAEERDQDKKRRVAGTESRAGESVEKPERVRPGTQLCQEEQG 231
Query: 81 E 81
E
Sbjct: 232 E 232
Score = 38 (18.4 bits), Expect = 7.1e-18, Sum P(4) = 7.1e-18
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 209 KIVEMFEAVDGTPY 222
K++E E VDG Y
Sbjct: 909 KVLEQLEEVDGRVY 922
Score = 37 (18.1 bits), Expect = 9.6e-18, Sum P(3) = 9.6e-18
Identities = 7/13 (53%), Positives = 8/13 (61%)
Query: 46 PTKRKTRSSVNDN 58
P KR R VN+N
Sbjct: 955 PMKRSKRDPVNEN 967
Score = 37 (18.1 bits), Expect = 9.6e-18, Sum P(3) = 9.6e-18
Identities = 14/53 (26%), Positives = 26/53 (49%)
Query: 231 ARDTVIESNA-HLIDQRRVFFSEIQNDN--PLECLVKKLNIARVPLNIDLEAK 280
AR + S A L D R +++ D EC+ +KLN+ L +++++
Sbjct: 8 ARVPALASPAGSLPDHVRRRLKDLERDGLTEKECVKEKLNLLHEFLQTEIKSQ 60
>TIGR_CMR|SPO_1049 [details] [associations]
symbol:SPO_1049 "DNA methylase, C-5 cytosine-specific
family" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003886 "DNA
(cytosine-5-)-methyltransferase activity" evidence=ISS] [GO:0006304
"DNA modification" evidence=ISS] InterPro:IPR001525 Pfam:PF00145
PRINTS:PR00105 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0003677 GO:GO:0006306 GO:GO:0008168 KO:K00558
PANTHER:PTHR10629 TIGRFAMs:TIGR00675 OMA:LLYEFAR RefSeq:YP_166300.1
ProteinModelPortal:Q5LUK5 REBASE:10710 GeneID:3194254
KEGG:sil:SPO1049 PATRIC:23375391 HOGENOM:HOG000225505
ProtClustDB:CLSK933423 Uniprot:Q5LUK5
Length = 373
Score = 165 (63.1 bits), Expect = 4.0e-11, Sum P(2) = 4.0e-11
Identities = 40/121 (33%), Positives = 62/121 (51%)
Query: 520 PGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDI 579
PG++ V+ GGPPCQ S +N R + DE+ ++ IVD L+P++++MENV I
Sbjct: 70 PGELTVLAGGPPCQAYSVYNHQRG----MHDERATLFKEYLRIVDGLRPEWIVMENVTGI 125
Query: 580 VKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPT 639
G + L + Y+V ++ A YG+PQ R RV G + + + PT
Sbjct: 126 YSIGGGEAVAAIKSELAALGYEVEEAVLRAEEYGVPQERRRVVFIGNRVGVPIS-HPEPT 184
Query: 640 H 640
H
Sbjct: 185 H 185
Score = 62 (26.9 bits), Expect = 4.0e-11, Sum P(2) = 4.0e-11
Identities = 13/32 (40%), Positives = 23/32 (71%)
Query: 673 LQDAISDLPSVDNYESRDEIPY-DREPETEFQ 703
++DAI DLP+++N E++ + Y D +P T +Q
Sbjct: 196 IKDAIGDLPALENGEAKPDAAYLDGKP-TSYQ 226
>UNIPROTKB|F1PAS9 [details] [associations]
symbol:DNMT1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0006306 "DNA methylation" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001525
Pfam:PF00145 PRINTS:PR00105 GO:GO:0003677 GO:GO:0006306
GO:GO:0008168 PANTHER:PTHR10629 GeneTree:ENSGT00390000005100
EMBL:AAEX03010534 Ensembl:ENSCAFT00000013291 OMA:TEDCHAL
Uniprot:F1PAS9
Length = 477
Score = 154 (59.3 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 56/196 (28%), Positives = 87/196 (44%)
Query: 518 PLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADE-KNKQLIVFMDIVDFLKPKFVLMENV 576
P G V ++CGGPPCQG+ G NR + P + KN ++ + D+ +P+ L+ENV
Sbjct: 126 PRRGAVVMLCGGPPCQGL-GINRVTS---PTCSKLKNTLVVSLLSYCDYYRPRCFLLENV 181
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEK-LPPY 635
+ V F + + R ++ Q G+ AG G Q + R + A P + L P
Sbjct: 182 RNSVSFQRSTVLRLSVPASSTW-LQWTPGVSQAGRCGPAQTQRRAIILAAAPGKPPLAPE 240
Query: 636 AL---PTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISD-LPSVDNYESRDE 691
L L V+ F N + G R + ++D +SD L + S
Sbjct: 241 LLRVFAARACQLSVVVDKRFVSNVTGFSSGP----FRTITVRDTVSDNLKKKKSGASGLG 296
Query: 692 IPYDREPETEFQCFIR 707
I YD EP++ Q +R
Sbjct: 297 ILYDGEPQSWLQRQLR 312
>UNIPROTKB|E2RM86 [details] [associations]
symbol:TRDMT1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0006306 "DNA methylation" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001525
InterPro:IPR018117 Pfam:PF00145 PRINTS:PR00105 PROSITE:PS00095
GO:GO:0003677 GO:GO:0006306 GO:GO:0008168 PANTHER:PTHR10629
KO:K15336 OMA:LFYEFAR TIGRFAMs:TIGR00675 CTD:1787
GeneTree:ENSGT00390000016416 InterPro:IPR025813 PROSITE:PS51607
EMBL:AAEX03001247 RefSeq:XP_848593.1 ProteinModelPortal:E2RM86
Ensembl:ENSCAFT00000007328 GeneID:487116 KEGG:cfa:487116
NextBio:20860760 Uniprot:E2RM86
Length = 391
Score = 103 (41.3 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 40/140 (28%), Positives = 66/140 (47%)
Query: 524 DVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLK--PKFVLMENVVDI-V 580
++I PPCQ F R + D + L+ ++I+ L+ PK+VL+ENV V
Sbjct: 71 NMILMSPPCQP---FTRI-GLQGDVTDPRTNSLLYILNILPRLQKLPKYVLLENVKGFEV 126
Query: 581 KFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTH 640
+ LL + L +Q + +++ ++G+P R+R FL +E LP + P
Sbjct: 127 SSTRDLL----IQTLENCGFQYQEFLLSPTSFGIPNSRLRYFLIAKLQSEPLP-FQAPGQ 181
Query: 641 DVVLRGVIPTEFE---RNTV 657
VL TE E +NT+
Sbjct: 182 --VLMEFPKTESENPEKNTI 199
Score = 80 (33.2 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 26/85 (30%), Positives = 42/85 (49%)
Query: 339 VKLLDLYSGCGAMSTXXXXXXXXXXXXXVTRWAVDINEYACQSLKLNHPETEVRNESAED 398
+++L+LYSG G M A+D+N A + K N P T++ ++ E
Sbjct: 4 LRVLELYSGIGGMHQALRESCIPAQVVA----AIDVNTVANEVYKYNFPHTQLLAKTIEG 59
Query: 399 FLTLLREWEKLCISFSLIARKDPQQ 423
+TL E++KL SF++I P Q
Sbjct: 60 -ITL-EEFDKL--SFNMILMSPPCQ 80
>UNIPROTKB|O14717 [details] [associations]
symbol:TRDMT1 "tRNA (cytosine(38)-C(5))-methyltransferase"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008033 "tRNA
processing" evidence=IEA] [GO:0001975 "response to amphetamine"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003886 "DNA
(cytosine-5-)-methyltransferase activity" evidence=TAS] [GO:0090116
"C-5 methylation of cytosine" evidence=TAS] InterPro:IPR001525
InterPro:IPR018117 Pfam:PF00145 PRINTS:PR00105 PROSITE:PS00094
PROSITE:PS00095 GO:GO:0005634 GO:GO:0003677 GO:GO:0001975
GO:GO:0003723 EMBL:CH471072 GO:GO:0008033 eggNOG:COG0270
GO:GO:0003886 PANTHER:PTHR10629 KO:K15336 OMA:LFYEFAR
TIGRFAMs:TIGR00675 EMBL:AC067747 CTD:1787 HOVERGEN:HBG051385
InterPro:IPR025813 EMBL:AF012128 EMBL:AJ223333 EMBL:AF045888
EMBL:EF444974 EMBL:AL133415 EMBL:BC047733 EMBL:AF329940
EMBL:AF329941 EMBL:AF329942 EMBL:AF329943 EMBL:AF329944
IPI:IPI00034003 IPI:IPI00219905 IPI:IPI00219906 IPI:IPI00219907
IPI:IPI00219908 IPI:IPI00221269 RefSeq:NP_004403.1
UniGene:Hs.351665 PDB:1G55 PDBsum:1G55 ProteinModelPortal:O14717
SMR:O14717 IntAct:O14717 STRING:O14717 PhosphoSite:O14717
PaxDb:O14717 PRIDE:O14717 Ensembl:ENST00000351358
Ensembl:ENST00000358282 Ensembl:ENST00000377799
Ensembl:ENST00000412821 Ensembl:ENST00000424636
Ensembl:ENST00000495022 Ensembl:ENST00000525762 GeneID:1787
KEGG:hsa:1787 UCSC:uc001iop.3 GeneCards:GC10M017098 HGNC:HGNC:2977
HPA:CAB009468 MIM:602478 neXtProt:NX_O14717 PharmGKB:PA162406922
InParanoid:O14717 PhylomeDB:O14717 BioCyc:MetaCyc:HS03011-MONOMER
ChiTaRS:TRDMT1 EvolutionaryTrace:O14717 GenomeRNAi:1787
NextBio:7271 ArrayExpress:O14717 Bgee:O14717 CleanEx:HS_TRDMT1
Genevestigator:O14717 GermOnline:ENSG00000107614 Uniprot:O14717
Length = 391
Score = 104 (41.7 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 31/113 (27%), Positives = 54/113 (47%)
Query: 524 DVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLK--PKFVLMENVVDI-V 580
D+I PPCQ F R + + D + + +DI+ L+ PK++L+ENV V
Sbjct: 71 DMILMSPPCQP---FTRI-GRQGDMTDSRTNSFLHILDILPRLQKLPKYILLENVKGFEV 126
Query: 581 KFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLP 633
+ LL + + +Q + +++ + G+P R+R FL +E LP
Sbjct: 127 SSTRDLL----IQTIENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSEPLP 175
Score = 75 (31.5 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 25/85 (29%), Positives = 41/85 (48%)
Query: 339 VKLLDLYSGCGAMSTXXXXXXXXXXXXXVTRWAVDINEYACQSLKLNHPETEVRNESAED 398
+++L+LYSG G M A+D+N A + K N P T++ ++ E
Sbjct: 4 LRVLELYSGVGGMHHALRESCIPAQVVA----AIDVNTVANEVYKYNFPHTQLLAKTIEG 59
Query: 399 FLTLLREWEKLCISFSLIARKDPQQ 423
+TL E+++L SF +I P Q
Sbjct: 60 -ITL-EEFDRL--SFDMILMSPPCQ 80
>MGI|MGI:1274787 [details] [associations]
symbol:Trdmt1 "tRNA aspartic acid methyltransferase 1"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006306 "DNA methylation" evidence=IEA]
[GO:0008033 "tRNA processing" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0032259 "methylation" evidence=IEA]
InterPro:IPR001525 InterPro:IPR018117 Pfam:PF00145 PRINTS:PR00105
PROSITE:PS00094 PROSITE:PS00095 EMBL:AF012129 MGI:MGI:1274787
GO:GO:0005634 GO:GO:0003677 GO:GO:0001975 GO:GO:0003723
GO:GO:0008033 GO:GO:0006306 GO:GO:0008168 eggNOG:COG0270
PANTHER:PTHR10629 KO:K15336 TIGRFAMs:TIGR00675 BRENDA:2.1.1.37
HOGENOM:HOG000265038 OMA:RLMSFPE CTD:1787 HOVERGEN:HBG051385
OrthoDB:EOG4MSCZB InterPro:IPR025813 EMBL:AF045889 IPI:IPI00115186
RefSeq:NP_034197.3 UniGene:Mm.6979 ProteinModelPortal:O55055
SMR:O55055 STRING:O55055 PhosphoSite:O55055 PaxDb:O55055
PRIDE:O55055 Ensembl:ENSMUST00000124488 GeneID:13434 KEGG:mmu:13434
InParanoid:O55055 NextBio:283863 Bgee:O55055 CleanEx:MM_TRDMT1
Genevestigator:O55055 GermOnline:ENSMUSG00000026723 Uniprot:O55055
Length = 415
Score = 99 (39.9 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 30/113 (26%), Positives = 53/113 (46%)
Query: 524 DVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLK--PKFVLMENVVDI-V 580
++I PPCQ F R + D + + +DI+ L+ PK++L+ENV V
Sbjct: 71 NMILMSPPCQP---FTRI-GLQGDMTDPRTTSFLYILDILPRLQKLPKYILLENVKGFEV 126
Query: 581 KFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLP 633
+GLL + + +Q + +++ + G+P R+R FL +E P
Sbjct: 127 SSTRGLL----IQTIEACGFQYQEFLLSPSSLGIPNSRLRYFLIAKLQSEPFP 175
Score = 74 (31.1 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 24/85 (28%), Positives = 40/85 (47%)
Query: 339 VKLLDLYSGCGAMSTXXXXXXXXXXXXXVTRWAVDINEYACQSLKLNHPETEVRNESAED 398
+++L+LYSG G M A+D+N A + K N P T + +++ E
Sbjct: 4 LRVLELYSGIGGMHHALRESHIPAHVVA----AIDVNTVANEVYKHNFPHTHLLSKTIEG 59
Query: 399 FLTLLREWEKLCISFSLIARKDPQQ 423
L +++KL SF++I P Q
Sbjct: 60 IS--LEDFDKL--SFNMILMSPPCQ 80
>ZFIN|ZDB-GENE-041008-138 [details] [associations]
symbol:trdmt1 "tRNA aspartic acid methyltransferase
1" species:7955 "Danio rerio" [GO:0006306 "DNA methylation"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0032259 "methylation" evidence=IEA]
InterPro:IPR001525 InterPro:IPR018117 Pfam:PF00145 PRINTS:PR00105
PROSITE:PS00095 ZFIN:ZDB-GENE-041008-138 GO:GO:0003677
GO:GO:0006306 GO:GO:0008168 PANTHER:PTHR10629 KO:K15336
TIGRFAMs:TIGR00675 CTD:1787 GeneTree:ENSGT00390000016416
HOVERGEN:HBG051385 InterPro:IPR025813 PROSITE:PS51607 EMBL:CU207275
EMBL:FP340248 EMBL:AB196920 IPI:IPI00496594 RefSeq:NP_001018153.1
UniGene:Dr.161731 SMR:Q588C1 STRING:Q588C1
Ensembl:ENSDART00000048633 GeneID:449878 KEGG:dre:449878
InParanoid:Q588C1 NextBio:20832928 Uniprot:Q588C1
Length = 381
Score = 109 (43.4 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 37/141 (26%), Positives = 67/141 (47%)
Query: 524 DVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFL--KPKFVLMENVVDIVK 581
D+I PPCQ F R +AD + K + +D++ L +P+F+L+ENV K
Sbjct: 74 DMILMSPPCQP---FTRI-GLQGDVADPRTKSFLYILDLLPRLSKRPRFILLENV----K 125
Query: 582 FAKGLLGRYALARLI-QMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTH 640
+ R AL + + + +Y + +++ + G+P R+R FL + E ++ P
Sbjct: 126 GFESSAARDALLQTLRECDYSFQEFLISPTSLGIPNSRLRYFLIAKRAPET---FSFPVS 182
Query: 641 DVVLRGVIPTEFERN-TVAYD 660
++ G +E +V YD
Sbjct: 183 TEIIEGFPMSESTDGLSVPYD 203
Score = 60 (26.2 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 23/85 (27%), Positives = 40/85 (47%)
Query: 339 VKLLDLYSGCGAMSTXXXXXXXXXXXXXVTRWAVDINEYACQSLKLNHPETEVRNESAED 398
+++ +LYSG G M AVD+N A K N P T++ ++ E
Sbjct: 7 LRVFELYSGIGGMHYALKESLVPAEVVA----AVDVNTTANLIYKHNFPTTQLLPKTIEG 62
Query: 399 FLTLLREWEKLCISFSLIARKDPQQ 423
+TL +++++L +F +I P Q
Sbjct: 63 -MTL-QDFDRL--NFDMILMSPPCQ 83
>RGD|1306292 [details] [associations]
symbol:Trdmt1 "tRNA aspartic acid methyltransferase 1"
species:10116 "Rattus norvegicus" [GO:0001975 "response to
amphetamine" evidence=IEP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0006306 "DNA
methylation" evidence=IEA] [GO:0008033 "tRNA processing"
evidence=IEA] [GO:0008168 "methyltransferase activity"
evidence=IEA] InterPro:IPR001525 InterPro:IPR018117 Pfam:PF00145
PRINTS:PR00105 PROSITE:PS00094 PROSITE:PS00095 RGD:1306292
GO:GO:0005634 GO:GO:0003677 GO:GO:0001975 GO:GO:0003723
GO:GO:0008033 GO:GO:0006306 GO:GO:0008168 eggNOG:COG0270
PANTHER:PTHR10629 KO:K15336 TIGRFAMs:TIGR00675 HOGENOM:HOG000265038
OMA:RLMSFPE CTD:1787 GeneTree:ENSGT00390000016416
HOVERGEN:HBG051385 OrthoDB:EOG4MSCZB InterPro:IPR025813
EMBL:BC098700 IPI:IPI00363164 RefSeq:NP_001026813.1 UniGene:Rn.115
ProteinModelPortal:Q4G073 SMR:Q4G073 STRING:Q4G073 PRIDE:Q4G073
Ensembl:ENSRNOT00000038651 GeneID:291324 KEGG:rno:291324
UCSC:RGD:1306292 InParanoid:Q4G073 NextBio:632414
Genevestigator:Q4G073 GermOnline:ENSRNOG00000026132 Uniprot:Q4G073
Length = 391
Score = 99 (39.9 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 30/112 (26%), Positives = 54/112 (48%)
Query: 524 DVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLK--PKFVLMENVVDI-V 580
++I PPCQ F R ++D + + +DI+ L+ PK++L+ENV V
Sbjct: 71 NMILMSPPCQP---FTRI-GLQGDMSDRRTNSFLYILDILPRLQKLPKYILLENVKGFEV 126
Query: 581 KFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKL 632
+GLL + + +Q + +++ + G+P R+R FL +E L
Sbjct: 127 SSTRGLL----IQTMEACGFQYQEFLLSPSSLGIPNSRLRYFLIAKLQSEPL 174
Score = 69 (29.3 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 24/85 (28%), Positives = 39/85 (45%)
Query: 339 VKLLDLYSGCGAMSTXXXXXXXXXXXXXVTRWAVDINEYACQSLKLNHPETEVRNESAED 398
+++L+LYSG G M A+D++ A + K N P T + ++ E
Sbjct: 4 LRVLELYSGIGGMHHALRESRVPAHVVA----AIDVSTVANEVYKHNFPHTHLLAKTIEG 59
Query: 399 FLTLLREWEKLCISFSLIARKDPQQ 423
L E++KL SF++I P Q
Sbjct: 60 IS--LEEFDKL--SFNMILMSPPCQ 80
>UNIPROTKB|F1NJ02 [details] [associations]
symbol:TRDMT1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006306
"DNA methylation" evidence=IEA] [GO:0008168 "methyltransferase
activity" evidence=IEA] InterPro:IPR001525 InterPro:IPR018117
Pfam:PF00145 PRINTS:PR00105 PROSITE:PS00095 GO:GO:0003677
GO:GO:0006306 GO:GO:0008168 PANTHER:PTHR10629 OMA:LFYEFAR
TIGRFAMs:TIGR00675 GeneTree:ENSGT00390000016416 InterPro:IPR025813
PROSITE:PS51607 EMBL:AADN02000651 IPI:IPI00619885 PRIDE:F1NJ02
Ensembl:ENSGALT00000014137 Uniprot:F1NJ02
Length = 398
Score = 93 (37.8 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 29/103 (28%), Positives = 51/103 (49%)
Query: 524 DVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLK--PKFVLMENVVDIVK 581
D+I PPCQ F R ++D + K + +DI+ L+ PK++L+ENV K
Sbjct: 71 DMILMSPPCQP---FTRI-GLQGDVSDPRTKSFLYILDILPRLQKCPKYLLLENV----K 122
Query: 582 FAKGLLGRYALARLIQM-NYQVRMGMMAAGAYGLPQFRMRVFL 623
+ R L R ++ ++ + +++ G+P R+R FL
Sbjct: 123 GFESSSARNELLRTLETCGFKYQEFLLSPTCLGIPNSRLRYFL 165
Score = 73 (30.8 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 26/85 (30%), Positives = 41/85 (48%)
Query: 339 VKLLDLYSGCGAMSTXXXXXXXXXXXXXVTRWAVDINEYACQSLKLNHPETEVRNESAED 398
+++L+LYSG G M AVD+N A + K N P T + ++ E
Sbjct: 4 LRVLELYSGIGGMHQALKESCICAEVVA----AVDVNTLANEVYKHNFPSTPLWAKTIEG 59
Query: 399 FLTLLREWEKLCISFSLIARKDPQQ 423
+TL +E+++L SF +I P Q
Sbjct: 60 -ITL-KEFDRL--SFDMILMSPPCQ 80
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.138 0.425 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 718 613 0.00088 120 3 11 22 0.40 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 27
No. of states in DFA: 628 (67 KB)
Total size of DFA: 381 KB (2186 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 47.92u 0.10s 48.02t Elapsed: 00:00:02
Total cpu time: 47.92u 0.10s 48.02t Elapsed: 00:00:02
Start: Fri May 10 04:05:01 2013 End: Fri May 10 04:05:03 2013