BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047980
(718 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|356497585|ref|XP_003517640.1| PREDICTED: DNA (cytosine-5)-methyltransferase CMT3-like [Glycine
max]
Length = 868
Score = 813 bits (2099), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/608 (65%), Positives = 492/608 (80%), Gaps = 18/608 (2%)
Query: 123 GEHDDDDEPEARFLGDPVPDGEARQRWPKRYEVKKQKR----RNQKDDDEEEIIQAKCHY 178
G D + ARF+G+PVPD EAR+RWPKRY+ K++K+ ++ ++D++EEI QA+ HY
Sbjct: 64 GNVSDGEGTNARFVGEPVPDEEARRRWPKRYQEKEKKQSAGPKSNRNDEDEEIQQARRHY 123
Query: 179 MWAEVDGHITYDLFDDAHVKAESGEEDYICKIVEMFEAVDGTPYFTAQWYYRARDTVIES 238
AEVDG + Y L+DDAHVKAE GE++YICKIVE+FEA+DG YFTAQWYYRA+DTVI+
Sbjct: 124 TQAEVDGCMLYKLYDDAHVKAEEGEDNYICKIVEIFEAIDGALYFTAQWYYRAKDTVIKK 183
Query: 239 NAHLIDQRRVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLAIPHCDYYCDMMYLLP 298
A+LI+ +RVFFSE+Q+DNPL+CLV+KLNIAR+ LN+DLEAKK IP CDYYCD YLLP
Sbjct: 184 LAYLIEPKRVFFSEVQDDNPLDCLVEKLNIARITLNVDLEAKKETIPPCDYYCDTQYLLP 243
Query: 299 YSTFFSLPPENKRVSSETSSTISS--------DVDANECEVGEPQKM---DVKLLDLYSG 347
YSTF +LP EN SETSSTISS +V++ E P++ ++KLLDLY G
Sbjct: 244 YSTFVNLPSENGESGSETSSTISSETNGIGKYEVNSQPKEAFLPEESKDPEMKLLDLYCG 303
Query: 348 CGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWE 407
CGAMSTGLCLG NL+G+NLVTRWAVD+N++AC+ LKLNHPETEVRNESAE+FL+LL+EW+
Sbjct: 304 CGAMSTGLCLGGNLSGVNLVTRWAVDLNQHACECLKLNHPETEVRNESAENFLSLLKEWQ 363
Query: 408 KLCISFSLIARKDPQQQ---LYSFNDDGESEEDDDNGNVEDESEDDSEIFEVEKILKICY 464
+LC FSL+ +K ++ L+S +DD S ++ N ++E +D EIFEV +IL +CY
Sbjct: 364 ELCSYFSLVEKKVSHEKYVNLFSEDDDDTSSNEEVNSEDDNELNEDDEIFEVSEILAVCY 423
Query: 465 GDPKEIKKRGLYLKVRWRNYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDVD 524
GDP + K++GLY KV W+ Y + D+WEPIEGLSNC EKIKEFV+ GFKS+ILPLPGDVD
Sbjct: 424 GDPNKKKEQGLYFKVHWKGYESALDSWEPIEGLSNCKEKIKEFVSRGFKSQILPLPGDVD 483
Query: 525 VICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAK 584
VICGGPPCQG+SGFNRFRNK++PL DEKNKQL+VFMDIV +LKPKF LMENVVD+VKFA+
Sbjct: 484 VICGGPPCQGISGFNRFRNKESPLDDEKNKQLVVFMDIVQYLKPKFTLMENVVDLVKFAE 543
Query: 585 GLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVL 644
G LGRYAL RL+QMNYQ R+G+MAAGAYGLPQFR+RVFLWGA P++KLP + LPTHDV++
Sbjct: 544 GFLGRYALGRLLQMNYQARLGIMAAGAYGLPQFRLRVFLWGAAPSQKLPQFPLPTHDVIV 603
Query: 645 RGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQC 704
RGVIP EFE NTVAY+EGQ+ +L +KLLL+DAISDLP V N E RDEI YD+ +TEFQ
Sbjct: 604 RGVIPLEFEINTVAYNEGQKVQLQKKLLLEDAISDLPRVQNNERRDEIKYDKAAQTEFQR 663
Query: 705 FIRLRKDG 712
FIRL K G
Sbjct: 664 FIRLSKHG 671
>gi|330370547|gb|AEC12443.1| chromomethylase 3 [Gossypium hirsutum]
Length = 824
Score = 806 bits (2083), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/588 (67%), Positives = 476/588 (80%), Gaps = 9/588 (1%)
Query: 127 DDDEPEARFLGDPVPDGEARQRWPKRYEVKKQKRRNQK--DDDEEEIIQAKCHYMWAEVD 184
++DE E +FLG+PV D EAR+RWPKRY+ K K+ K + D EEIIQA+ HY A+VD
Sbjct: 38 NEDEEETKFLGEPVDDEEARRRWPKRYQGKGAKKVISKSSNGDSEEIIQARRHYTQAKVD 97
Query: 185 GHITYDLFDDAHVKAESGEEDYICKIVEMFEAVDGTPYFTAQWYYRARDTVIESNAHLID 244
G + ++L+DDAHVKAE GE+ YICKIVEMFEAVDG YFTAQW+YRA+DTV+++ HLID
Sbjct: 98 GCMIFNLYDDAHVKAEDGEDCYICKIVEMFEAVDGDLYFTAQWFYRAQDTVLKTLGHLID 157
Query: 245 QRRVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLAIPHCDYYCDMMYLLPYSTFFS 304
++RVFFS+IQ+DNPL+CLV KLNIA+V DLEAK IP CDYYCDM+Y L YS+F +
Sbjct: 158 KKRVFFSQIQDDNPLDCLVAKLNIAKV----DLEAKNKEIPSCDYYCDMLYKLEYSSFTN 213
Query: 305 LPPENKRVSSETSSTISSDVDANECEVGEPQKMDVKLLDLYSGCGAMSTGLCLGANLAGL 364
LPPE K +SE +S+ SD + D LLDLYSGCGAMSTGLCLGAN+AGL
Sbjct: 214 LPPEGKTNASEEASSTISDDSPDTVNGANSGSEDASLLDLYSGCGAMSTGLCLGANMAGL 273
Query: 365 NLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWEKLCISFSLIARKDPQQQ 424
LVT+WAVDIN+YAC+SL+ NHPET VRNESAEDFL LL+EWE+LC SFSL ++ ++Q
Sbjct: 274 RLVTKWAVDINKYACESLQWNHPETTVRNESAEDFLALLKEWERLCASFSLSKSENLERQ 333
Query: 425 LYSFNDDGESEEDDDNGNVEDESEDDSE-IFEVEKILKICYGDPKEIKKRGLYLKVRWRN 483
SFN + +D EDE+ED +FEVEK L ICYGDPKE +RGLYLKVRW+N
Sbjct: 334 --SFNSSVNEDNVNDEEEEEDENEDGDGEVFEVEKFLAICYGDPKEKGERGLYLKVRWKN 391
Query: 484 YGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRN 543
YGP EDTWEP++GL +C E +K+FVT GFK+KILPLPGDVDVICGGPPCQG+SGFNRFRN
Sbjct: 392 YGPEEDTWEPLDGLGDCRECLKDFVTSGFKAKILPLPGDVDVICGGPPCQGISGFNRFRN 451
Query: 544 KDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVR 603
KDNPL DEKNKQL VF +IV++LKPKFVLMENVVDIVKFA+G LGRYAL++LI +NYQVR
Sbjct: 452 KDNPLQDEKNKQLQVFTEIVEYLKPKFVLMENVVDIVKFAEGYLGRYALSKLIHLNYQVR 511
Query: 604 MGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQ 663
MGMMAAGAYGLPQFRMR F WGA+P +KLP Y LPTHD+VLRGVIP EFE NTV ++EG+
Sbjct: 512 MGMMAAGAYGLPQFRMRAFFWGARPNQKLPQYPLPTHDLVLRGVIPVEFEMNTVGWEEGK 571
Query: 664 QAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQCFIRLRKD 711
+ EL +KLLL+DAISDLPSV NYE +DE+ Y++EP+TEFQ FIRLR++
Sbjct: 572 KIELEKKLLLEDAISDLPSVGNYEDKDEMDYEKEPKTEFQRFIRLRRE 619
>gi|359478779|ref|XP_002283355.2| PREDICTED: DNA (cytosine-5)-methyltransferase CMT3-like [Vitis
vinifera]
Length = 956
Score = 805 bits (2080), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/605 (66%), Positives = 480/605 (79%), Gaps = 21/605 (3%)
Query: 129 DEPEARFLGDPVPDGEARQRWPKRYEVKKQKRR------NQKDDDEEEIIQAKCHYMWAE 182
+E + R +G+ +PD EARQRWP+RYE KK+ + ++ DD EEI++A+CHY AE
Sbjct: 159 EEGDCRLVGEVIPDEEARQRWPERYEPKKKNTQASGSKSSKDKDDSEEIVKARCHYRQAE 218
Query: 183 VDGHITYDLFDDAHVKAESGEEDYICKIVEMFEAVDGTPYFTAQWYYRARDTVIESNAHL 242
+DG + +L DDAHVKA + YICKIVE+F A+DGTPYFTAQW+YRARDTVI+ +A+L
Sbjct: 219 IDGRVIVNLNDDAHVKAGDNADHYICKIVELFVALDGTPYFTAQWFYRARDTVIKDHANL 278
Query: 243 IDQRRVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLAIPHCDYYCDMMYLLPYSTF 302
ID +RVFFSE+++DNPL+CLV+KLNIARVP N+DLEA+KLAI CDYY DM+YLL YS+F
Sbjct: 279 IDNKRVFFSEMRDDNPLDCLVQKLNIARVPHNLDLEARKLAISSCDYYYDMLYLLDYSSF 338
Query: 303 FSLPPENKRVSSETSSTISS--DVDANECEVG----------EPQKMDVKLLDLYSGCGA 350
LPPEN RV+SE STISS ++D + CE+ E ++ LLDLYSGCGA
Sbjct: 339 IKLPPENSRVNSEALSTISSEANMDGSTCELKSDSEEVSQARERSLSEMTLLDLYSGCGA 398
Query: 351 MSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWEKLC 410
MS+GLCLGA ++G+NLVTRWA+DIN YAC+S++LNHPET+VRNESAEDFL LLREWEKLC
Sbjct: 399 MSSGLCLGAKMSGVNLVTRWAIDINAYACESVRLNHPETQVRNESAEDFLALLREWEKLC 458
Query: 411 ISFSLIARKDPQQQLYSFNDDGESEEDDDNGNVEDESEDDS--EIFEVEKILKICYGDPK 468
+ FSLI KDP D EE+DD+ N D SED+ E+FEV+KI+ ICYGDPK
Sbjct: 459 VRFSLIGNKDPNAHDLDPIDAKADEENDDDDNDNDNSEDEDDFEVFEVQKIIGICYGDPK 518
Query: 469 EIKKRGLYLKVRWRNYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDVDVICG 528
+ R L+ KVRW+ YGPS D+WEP EGL NC E IK+FVT G+KSKILPLPGDVDVICG
Sbjct: 519 DKGDRELHFKVRWKGYGPSADSWEPFEGLGNCCESIKDFVTEGYKSKILPLPGDVDVICG 578
Query: 529 GPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLG 588
GPPCQG+SGFNRFRNK+NPL D KNKQL+VFMD+V++LKP+FVLMENVVDIVKFA G LG
Sbjct: 579 GPPCQGISGFNRFRNKENPLEDPKNKQLVVFMDVVNYLKPRFVLMENVVDIVKFAGGYLG 638
Query: 589 RYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVI 648
RYAL RLI MNYQ RMGMMAAGAYGLPQFRMRVF+WGA+ E LP Y LPTHDV++RGVI
Sbjct: 639 RYALGRLIGMNYQTRMGMMAAGAYGLPQFRMRVFMWGARFEEVLPQYPLPTHDVIIRGVI 698
Query: 649 PTEFERNTVAYDEGQQA-ELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQCFIR 707
P EFE NTVAYDEG + EL KLLL DAISDLP V N E+RDE+PY + P+TEFQ FIR
Sbjct: 699 PLEFEMNTVAYDEGHKFDELETKLLLADAISDLPPVTNDEARDEMPYGKAPQTEFQRFIR 758
Query: 708 LRKDG 712
LRK+G
Sbjct: 759 LRKNG 763
>gi|449462605|ref|XP_004149031.1| PREDICTED: DNA (cytosine-5)-methyltransferase CMT3-like [Cucumis
sativus]
Length = 855
Score = 801 bits (2069), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/617 (65%), Positives = 487/617 (78%), Gaps = 23/617 (3%)
Query: 105 NRSSSKKPIDSVKKLPVRGEHDDDDEPEARFLGDPVPDGEARQRWPKRY--EVKKQKRRN 162
+RSS K +K+ ++DD P ARFL PD +AR RWP RY + K
Sbjct: 41 SRSSPKPSAAKTRKVKAELSVEEDDAP-ARFLQPHFPDSDARVRWPLRYARKKKNVVEEK 99
Query: 163 QKDDDEEEIIQAKCHYMWAEVDGHITYDLFDDAHVKAESGEEDYICKIVEMFEAVDGTPY 222
+ DD EE+IQA HY A+VD +ITY+L DDAHVKAE E+DYICKI+EMFEAVDG Y
Sbjct: 100 KSRDDSEEVIQALHHYSQAKVD-NITYNLLDDAHVKAEGEEDDYICKIIEMFEAVDGQLY 158
Query: 223 FTAQWYYRARDTVIESNAHLIDQRRVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKL 282
FTAQWYYRA+DTV++ +AHLI+ +RVFFSE+++DNPL+CLVKKLNIAR+PL +D KK
Sbjct: 159 FTAQWYYRAKDTVVKDHAHLINDKRVFFSEVRDDNPLDCLVKKLNIARIPLTMD--EKKN 216
Query: 283 AIPHCDYYCDMMYLLPYSTFFSLPPENKRVSSETSSTISSDVDANE-CEVGEPQ------ 335
+P CD+YCDM+YLLPYS+F LP K+V SETSSTISSDVD NE CEV
Sbjct: 217 CLPSCDFYCDMLYLLPYSSFVKLPTSEKKVGSETSSTISSDVDTNEACEVNSQIGDVTQA 276
Query: 336 ----KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEV 391
K DV LLDLYSGCGAMSTGLCLG NL+G+NLVT+WAVD+N+YAC+SL+ NHPET+V
Sbjct: 277 QQCCKPDVALLDLYSGCGAMSTGLCLGGNLSGVNLVTKWAVDLNQYACESLRFNHPETQV 336
Query: 392 RNESAEDFLTLLREWEKLCISFSLIARKDPQQQLYSFNDDGESEEDDDNGNVEDESEDDS 451
RNE AEDFL+L++EWE LC SL+ K+PQQ+ ++D+ N ++++E+D
Sbjct: 337 RNEMAEDFLSLVKEWEVLCKYCSLVKSKEPQQKYIDL-----FADEDEEENEDEKTEEDE 391
Query: 452 EIFEVEKILKICYGDPKEIKKRGLYLKVRWRNYGPSEDTWEPIEGLSNCGEKIKEFVTHG 511
E+FEVEKIL ICYGDP E KKRGL+LKVRW+ YG EDTWEPI+GLSNC EK+K+FVT G
Sbjct: 392 EVFEVEKILAICYGDPNETKKRGLFLKVRWKGYGSDEDTWEPIDGLSNCKEKLKDFVTSG 451
Query: 512 FKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFV 571
+KSKILPLPGDVDVICGGPPCQG+SGFNRFRNK+NPL DEKNKQL+V+MD+V++L+PK+V
Sbjct: 452 YKSKILPLPGDVDVICGGPPCQGISGFNRFRNKENPLEDEKNKQLVVYMDLVEYLRPKYV 511
Query: 572 LMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEK 631
LMENVVDIVKFA G LGRYAL RLI MNYQVRMGMMAAGAYGLPQFRMR+F+WGAQPTEK
Sbjct: 512 LMENVVDIVKFANGFLGRYALGRLISMNYQVRMGMMAAGAYGLPQFRMRMFMWGAQPTEK 571
Query: 632 LPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQ-AELARKLLLQDAISDLPSVDNYESRD 690
LP Y LPTHDVV+RGVIPTEFE N VAY+EG + L +KLLL+DAISDLP+V+N E RD
Sbjct: 572 LPQYPLPTHDVVVRGVIPTEFEMNVVAYEEGHKDVHLEKKLLLEDAISDLPAVENDERRD 631
Query: 691 EIPYDREPETEFQCFIR 707
E+PY P+TEFQ IR
Sbjct: 632 EMPYHEPPKTEFQHLIR 648
>gi|449526100|ref|XP_004170052.1| PREDICTED: DNA (cytosine-5)-methyltransferase CMT3-like, partial
[Cucumis sativus]
Length = 753
Score = 775 bits (2002), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/554 (69%), Positives = 458/554 (82%), Gaps = 20/554 (3%)
Query: 166 DDEEEIIQAKCHYMWAEVDGHITYDLFDDAHVKAESGEEDYICKIVEMFEAVDGTPYFTA 225
DD EE+IQA HY A+VD +ITY+L DDAHVKAE E+DYICKI+EMFEAVDG YFTA
Sbjct: 1 DDSEEVIQALHHYSQAKVD-NITYNLLDDAHVKAEGEEDDYICKIIEMFEAVDGQLYFTA 59
Query: 226 QWYYRARDTVIESNAHLIDQRRVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLAIP 285
QWYYRA+DTV++ +AHLI+ +RVFFSE+++DNPL+CLVKKLNIAR+PL +D KK +P
Sbjct: 60 QWYYRAKDTVVKDHAHLINDKRVFFSEVRDDNPLDCLVKKLNIARIPLTMD--EKKNCLP 117
Query: 286 HCDYYCDMMYLLPYSTFFSLPPENKRVSSETSSTISSDVDANE-CEVG----------EP 334
CD+YCDM+YLLPYS+F LP K+V SETSSTISSDVD NE CEV +
Sbjct: 118 SCDFYCDMLYLLPYSSFVKLPTSEKKVGSETSSTISSDVDTNEACEVNSQIGDVTQAQQC 177
Query: 335 QKMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNE 394
K DV LLDLYSGCGAMSTGLCLG NL+G+NLVT+WAVD+N+YAC+SL+ NHPET+VRNE
Sbjct: 178 CKPDVALLDLYSGCGAMSTGLCLGGNLSGVNLVTKWAVDLNQYACESLRFNHPETQVRNE 237
Query: 395 SAEDFLTLLREWEKLCISFSLIARKDPQQQLYSFNDDGESEEDDDNGNVEDESEDDSEIF 454
AEDFL+L++EWE LC SL+ K+PQQ+ ++D+ N ++++E+D E+F
Sbjct: 238 MAEDFLSLVKEWEVLCKYCSLVKSKEPQQKYIDL-----FADEDEEENEDEKTEEDEEVF 292
Query: 455 EVEKILKICYGDPKEIKKRGLYLKVRWRNYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKS 514
EVEKIL ICYGDP E KKRGL+LKVRW+ YG EDTWEPI+GLSNC EK+K+FVT G+KS
Sbjct: 293 EVEKILAICYGDPNETKKRGLFLKVRWKGYGSDEDTWEPIDGLSNCKEKLKDFVTSGYKS 352
Query: 515 KILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLME 574
KILPLPGDVDVICGGPPCQG+SGFNRFRNK+NPL DEKNKQL+V+MD+V++L+PK+VLME
Sbjct: 353 KILPLPGDVDVICGGPPCQGISGFNRFRNKENPLEDEKNKQLVVYMDLVEYLRPKYVLME 412
Query: 575 NVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPP 634
NVVDIVKFA G LGRYAL RLI MNYQVRMGMMAAGAYGLPQFRMR+F+WGAQPTEKLP
Sbjct: 413 NVVDIVKFANGFLGRYALGRLISMNYQVRMGMMAAGAYGLPQFRMRMFMWGAQPTEKLPQ 472
Query: 635 YALPTHDVVLRGVIPTEFERNTVAYDEGQQ-AELARKLLLQDAISDLPSVDNYESRDEIP 693
Y LPTHDVV+RGVIPTEFE N VAY+EG + L +KLLL+DAISDLP+V+N E RDE+P
Sbjct: 473 YPLPTHDVVVRGVIPTEFEMNVVAYEEGHKDVHLEKKLLLEDAISDLPAVENDERRDEMP 532
Query: 694 YDREPETEFQCFIR 707
Y P+TEFQ IR
Sbjct: 533 YHEPPKTEFQHLIR 546
>gi|224057130|ref|XP_002299134.1| DNA methyltransferase [Populus trichocarpa]
gi|222846392|gb|EEE83939.1| DNA methyltransferase [Populus trichocarpa]
Length = 973
Score = 770 bits (1988), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/653 (61%), Positives = 494/653 (75%), Gaps = 28/653 (4%)
Query: 89 NSVAGSGSSSGVKVNKNRSSSK------KPIDSVKKLPVRGEHDDDDEPEARFLGDPVPD 142
NS+ G+ G +RS +K + KK+ + ++D ARF+G+ VPD
Sbjct: 133 NSIDEVGAKMGTDNGDSRSETKEKEKEKRGSGKTKKISTPEKAKEEDGTPARFVGNQVPD 192
Query: 143 GEARQRWPKRYEVKKQKRR-----NQKDDDEEEIIQAKCHYMWAEVDGHITYDLFDDAHV 197
EAR++WP RY K + + + DD EEII+A+CHY AEVDG I Y+L+DDAHV
Sbjct: 193 AEARKKWPHRYANKIKNKTPISKPSNSLDDSEEIIKARCHYKRAEVDG-IIYNLYDDAHV 251
Query: 198 KAESGEEDYICKIVEMFEAVDGTPYFTAQWYYRARDTVIESNAHLIDQRRVFFSEIQNDN 257
+A GE DYIC+I+EMFE+ D TP+FTAQWYYR+ DT+I+ + ++ D + VFFSEI+NDN
Sbjct: 252 QASDGEADYICRIIEMFESEDRTPHFTAQWYYRSTDTIIK-DKYISDPKCVFFSEIRNDN 310
Query: 258 PLECLVKKLNIARVPLNIDLEAKKLAIPHCDYYCDMMYLLPYSTFFSLPPENKRVSSETS 317
PL+CL +KL I R+ L +D E ++ +CD+YCDM+YLLPYSTF LP EN + E+S
Sbjct: 311 PLDCLTRKLKIVRLALGVDSETRRAKTLNCDFYCDMLYLLPYSTFVKLPSENNTTAPESS 370
Query: 318 STISSDVDA--------NECEVGEPQKMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTR 369
STISSD+DA CE +K +V LLDLYSGCGAMSTGLCLGANL+GLNLVT+
Sbjct: 371 STISSDIDAAGVKFECDEVCESSGRRKSEVALLDLYSGCGAMSTGLCLGANLSGLNLVTK 430
Query: 370 WAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWEKLCISFSLIARKDPQ-QQLYSF 428
WAVD+N++AC+SL+LNHPET+VRNE+AEDFL LL+EWEKLCI FSL+ DP+ QQ YSF
Sbjct: 431 WAVDLNKHACESLRLNHPETQVRNETAEDFLMLLKEWEKLCIRFSLVKNDDPEKQQTYSF 490
Query: 429 N-----DDGESEEDDDNGNVEDESEDDSEIFEVEKILKICYGDPKEI-KKRGLYLKVRWR 482
+ DD + EE+DD+ N ++ DDSE+FEVEKIL++C+GDPKEI +R LY KV W+
Sbjct: 491 DMDDEDDDDDEEEEDDDNNDVSDNNDDSEVFEVEKILEVCHGDPKEIGGQRDLYFKVSWK 550
Query: 483 NYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFR 542
NYGP DTWEPI GLSNC E IK+FV HG+KS ILPLPGDV+VICGGPPCQG+SGFNRFR
Sbjct: 551 NYGPDYDTWEPISGLSNCREAIKKFVMHGYKSNILPLPGDVEVICGGPPCQGISGFNRFR 610
Query: 543 NKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQV 602
N NPL D KNKQL+VFMDIVDFLKPKFVLMENVVD++KFA G LGRYA+ L+ M YQ
Sbjct: 611 NVKNPLEDPKNKQLVVFMDIVDFLKPKFVLMENVVDLLKFADGFLGRYAMGCLVSMKYQA 670
Query: 603 RMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEG 662
R+GM+AAGAYGLPQFRMRVFLWGA TEKLP Y LPTHDV++RGV+P EFE NTVAY+EG
Sbjct: 671 RLGMLAAGAYGLPQFRMRVFLWGACATEKLPQYPLPTHDVLVRGVVPLEFEGNTVAYEEG 730
Query: 663 QQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQCFIRLRKDGKKL 715
+ +L RKL L+DAISDLP+V N E RDE+PY P+TEFQ IRL+K G +L
Sbjct: 731 VKPQLERKLFLEDAISDLPAVANDEKRDEMPYGESPKTEFQRMIRLKKMGLEL 783
>gi|411012959|gb|AFV99136.1| CMT-type cytosine DNA-methyltransferase 3b [Malus x domestica]
Length = 1096
Score = 732 bits (1890), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/599 (60%), Positives = 454/599 (75%), Gaps = 18/599 (3%)
Query: 127 DDDEPEARFLGDPVPDGEARQRWPKRYEVKKQKRRNQKD-DDEEEIIQAKCHYMWAEVDG 185
DDD EARFLG+P+ D EAR+++PKRY KK K Q + +D+E+IIQA+CHY A VDG
Sbjct: 170 DDDGEEARFLGEPMEDEEARKQYPKRYVGKKPKMNGQNNSNDDEDIIQARCHYTKALVDG 229
Query: 186 HITYDLFDDAHVKAESGEEDYICKIVEMFEAVDGTPYFTAQWYYRARDTVIESNAHLIDQ 245
I YDL+DDAH + EE YICKIVEMFEA+ G YFTAQWYYR+RDTVI+ + +
Sbjct: 230 -INYDLYDDAH--SGEKEEPYICKIVEMFEAIGGLLYFTAQWYYRSRDTVIK-HCTTVAC 285
Query: 246 RRVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLAIPHCDYYCDMMYLLPYSTFFSL 305
RVFFS++++DNPL CLV+KL+I R+ LN+D + K +IP C+YYCD YLLPYSTF +L
Sbjct: 286 GRVFFSDVRDDNPLNCLVEKLHIVRLTLNVDEDLKSKSIPVCNYYCDTKYLLPYSTFVNL 345
Query: 306 PPENKRVSSETSSTISSDVDANECEV------GEPQKMDVKLLDLYSGCGAMSTGLCLGA 359
EN + S+ S+ D + EV GE K +V+LLDLYSGCGAMSTGLCLGA
Sbjct: 346 XAENMQTGSDDSTISVEDDVCLDSEVDSKLPNGERAKSEVRLLDLYSGCGAMSTGLCLGA 405
Query: 360 NLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWEKLCISFSLIARK 419
+LA +NLVTRWAVD N+YAC+SL NHPETEVRNE+AEDFLT+L+ W KLC+ L+
Sbjct: 406 HLANVNLVTRWAVDYNKYACKSLAQNHPETEVRNEAAEDFLTMLKAWRKLCMCLKLVEND 465
Query: 420 DPQQQL-------YSFNDDGESEEDDDNGNVEDESEDDSEIFEVEKILKICYGDPKEIKK 472
+ ++ + + DD E EED++ +V ++DSE+FEV+ ++ +C+GDPK+ +K
Sbjct: 466 NLEEDVDKSILDFFGKEDDEEEEEDEEEEDVSGNVKNDSEVFEVDCVIGVCFGDPKKTEK 525
Query: 473 RGLYLKVRWRNYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDVDVICGGPPC 532
+G+Y K+ W+ YGP EDTWEP+ L +C + IK+F+T G++ K LPLPGDVDV+CGGPPC
Sbjct: 526 KGIYFKIHWKGYGPXEDTWEPMNELEHCKQAIKKFITEGYRLKKLPLPGDVDVVCGGPPC 585
Query: 533 QGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYAL 592
QGVSGFNRFRN ++PLAD+KN+QL V+MDIV +L PKFVLMENVVDI+KFA G LGRYAL
Sbjct: 586 QGVSGFNRFRNTESPLADDKNQQLEVYMDIVRYLXPKFVLMENVVDILKFADGFLGRYAL 645
Query: 593 ARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEF 652
RL+ MNYQVRMGMMAAGAYGLPQFRMRVFLWGA+PTE LP Y LPTHDVV RGV PT+F
Sbjct: 646 GRLVDMNYQVRMGMMAAGAYGLPQFRMRVFLWGARPTEILPQYPLPTHDVVSRGVTPTQF 705
Query: 653 ERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQCFIRLRKD 711
E N VAYDEG Q +L + L L DAISDLP+V N E RDE+PY P+TEFQ IRL K+
Sbjct: 706 EGNAVAYDEGHQTQLGKSLFLDDAISDLPAVANNEERDEMPYGVAPKTEFQRLIRLSKE 764
>gi|159461700|gb|ABW96889.1| CMT-type DNA-methyltransferase [Elaeis guineensis]
Length = 925
Score = 719 bits (1857), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/607 (61%), Positives = 443/607 (72%), Gaps = 33/607 (5%)
Query: 127 DDDEPEARFLGDPVPDGEARQRWPKRYEVKKQKRR-----NQKDDDEEEIIQAKCHYMWA 181
++ E E F+G+PVPD EA++RWP+RY+ K +R + K DEEE+++A+ HY A
Sbjct: 122 NEKEVEHCFVGEPVPDDEAKKRWPERYQRKNAGKRALASASSKKSDEEEVLKARRHYWQA 181
Query: 182 EVDGHITYDLFDDAHVKAESGEEDYICKIVEMFEAVDGTPYFTAQWYYRARDTVIESNAH 241
VD ++ Y+L DDA++KA GE DYI +IVE FE DG YF AQW++RA DTVI+ AH
Sbjct: 182 MVD-NVIYNLNDDAYIKAGDGEPDYIGRIVEFFETTDGQLYFAAQWFFRAEDTVIKEIAH 240
Query: 242 ----LIDQRRVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLAIPHCDYYCDMMYLL 297
+ D RRVF SE +NDN L+C+V K+ I RV NIDL+AK+ +IP CD Y DM Y L
Sbjct: 241 DPKTVHDPRRVFLSEEKNDNVLDCIVSKIRIVRVESNIDLKAKEDSIPPCDLYYDMSYSL 300
Query: 298 PYSTFFSLPPENKRVSSETSSTISSDVDANECE---------VGEPQKMDVKLLDLYSGC 348
YSTF +LPPE+ R SETSSTISS+ +N C+ +K + LLDLYSGC
Sbjct: 301 SYSTFGNLPPESLRAGSETSSTISSEDASNVCKGKCQSDSEASSSGEKRVLSLLDLYSGC 360
Query: 349 GAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWEK 408
GAMSTGLCLGANL+GL L TRWAVDIN YAC+SLKLNHP TEVRNE AEDFL LLREWEK
Sbjct: 361 GAMSTGLCLGANLSGLKLETRWAVDINPYACESLKLNHPHTEVRNEKAEDFLALLREWEK 420
Query: 409 LCISFSLIARKDPQQQLYSFNDDGESEEDDDNGNVEDESEDDSEI----FEVEKILKICY 464
LC F+LI + SF ES DD EDES +E+ FEV K++ ICY
Sbjct: 421 LCAKFNLIGMES------SFAQGSESSGSDD----EDESRISTEVPRGEFEVGKLVGICY 470
Query: 465 GDPKEIKKRGLYLKVRWRNYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDVD 524
GDP I K GL KVRW+ YGPSEDTWEPI+GLS C E+IK+FV +G+K ILPLPG VD
Sbjct: 471 GDPSNIGKVGLKFKVRWKGYGPSEDTWEPIDGLSKCQERIKDFVQNGYKKNILPLPGKVD 530
Query: 525 VICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAK 584
VICGGPPCQG+SGFNRFRN + PL D KN+Q++VFMDIVDFLKPK+VLMENVVDI+KFA
Sbjct: 531 VICGGPPCQGISGFNRFRNYNAPLEDPKNQQMVVFMDIVDFLKPKYVLMENVVDILKFAH 590
Query: 585 GLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVL 644
G L RYAL+RL+ MNYQ R+GMM AG YGLPQFRMRVFLWGA PTE LP + LPTHDVV+
Sbjct: 591 GFLLRYALSRLVAMNYQARLGMMVAGCYGLPQFRMRVFLWGACPTEILPQFPLPTHDVVV 650
Query: 645 RGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQC 704
RG P EFE+N VAYDE Q +L R LLL+DAISDLP V N E RDE+PY R P TEFQ
Sbjct: 651 RGGAPNEFEQNIVAYDENQHRQLERALLLEDAISDLPQVGNNEMRDEMPYGRPPRTEFQH 710
Query: 705 FIRLRKD 711
FIRL ++
Sbjct: 711 FIRLTRE 717
>gi|297739809|emb|CBI29991.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 714 bits (1842), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/595 (58%), Positives = 438/595 (73%), Gaps = 19/595 (3%)
Query: 132 EARFLGDPVPDGEARQRWPKRYEVKKQKRRNQKDDDE----EEIIQAKCHYMWAEVDGHI 187
EA +G P+ EARQ+WP+RY +K + + DE E+I+QA+ H+ A VDG I
Sbjct: 30 EASVVGAPISVNEARQKWPQRYISTFRKGSDSRTKDESIEAEDILQARRHFTEAVVDGCI 89
Query: 188 TYDLFDDAHVKAESGEEDYICKIVEMFEAVDGTPYFTAQWYYRARDTVIESNAHLIDQRR 247
Y L+D A+VKAE G+ D+I KIVE+FE +D PYFTAQW++RA DTVI+ +AHL+DQ+R
Sbjct: 90 -YKLYDYAYVKAEDGQPDFIAKIVELFETIDREPYFTAQWFFRAEDTVIKDHAHLVDQKR 148
Query: 248 VFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLAIPHCDYYCDMMYLLPYSTFFSLPP 307
VF+S++++DNPL+C+V K+ I +V N+DL K+ IP CD Y DM Y L + TF +L
Sbjct: 149 VFYSDMRDDNPLDCIVSKVEIVQVAPNVDLAEKEKTIPPCDLYYDMSYSLKHLTFANLLT 208
Query: 308 ENKRVSSETSSTISSDVDANEC------------EVGEPQKMDVKLLDLYSGCGAMSTGL 355
EN R S+ SSTISS++ N +V + Q + LLDLYSGCGAMSTGL
Sbjct: 209 ENSRTESDESSTISSEIGLNSTTDGINSAIGESSQVHKFQGSGMTLLDLYSGCGAMSTGL 268
Query: 356 CLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWEKLCISFSL 415
CLGA+L+GL LVTRWAVDIN +AC+SLKLNHPETEVRNE+AEDFL+LL+EW LC FSL
Sbjct: 269 CLGASLSGLKLVTRWAVDINPHACESLKLNHPETEVRNEAAEDFLSLLKEWATLCEDFSL 328
Query: 416 IARKDPQQQLYSFNDDGESEEDDDNGNVEDESEDDSEIFEVEKILKICYGDPKEIKKRGL 475
+ + P+ N G +E+D +G+ FEV+K++ ICYGDP EI K GL
Sbjct: 329 LGSRRPEVVNPISNRSGSDDEEDADGDDGSPVPRGE--FEVKKLVAICYGDPNEINKPGL 386
Query: 476 YLKVRWRNYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGV 535
Y KVRW+ YGPS+DTWEPIEGLS C + +KEFV G++S ILPLPGDVD ICGGPPCQGV
Sbjct: 387 YFKVRWKGYGPSDDTWEPIEGLSKCKKSVKEFVKKGYRSSILPLPGDVDFICGGPPCQGV 446
Query: 536 SGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARL 595
SGFNRFRN + PL D KN QL+VFMDIV++LKPK+VLMENVVDI+KFA G LGRYA+ RL
Sbjct: 447 SGFNRFRNTEAPLDDPKNHQLVVFMDIVNYLKPKYVLMENVVDILKFAGGFLGRYAMGRL 506
Query: 596 IQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERN 655
+ MNYQ R+GMMAAG+YG+PQ+RMRVFLWGA P EKLPPY LPTHDV+ RGV+P EFE
Sbjct: 507 VSMNYQARLGMMAAGSYGVPQYRMRVFLWGAHPMEKLPPYPLPTHDVIGRGVVPNEFEEI 566
Query: 656 TVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQCFIRLRK 710
TV YD+ + +L + L L DAISDLP V NY +DE+PY++ TEFQ +IRLRK
Sbjct: 567 TVGYDKSELCKLEKALFLGDAISDLPPVTNYNGQDEMPYNKAAHTEFQRYIRLRK 621
>gi|225441510|ref|XP_002275932.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Vitis
vinifera]
Length = 829
Score = 712 bits (1837), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/597 (58%), Positives = 439/597 (73%), Gaps = 21/597 (3%)
Query: 132 EARFLGDPVPDGEARQRWPKRY----EVKKQKRRNQKDD--DEEEIIQAKCHYMWAEVDG 185
EA +G P+ EARQ+WP+RY + +K KD+ + E+I+QA+ H+ A VDG
Sbjct: 30 EASVVGAPISVNEARQKWPQRYISTNKFRKGSDSRTKDESIEAEDILQARRHFTEAVVDG 89
Query: 186 HITYDLFDDAHVKAESGEEDYICKIVEMFEAVDGTPYFTAQWYYRARDTVIESNAHLIDQ 245
I Y L+D A+VKAE G+ D+I KIVE+FE +D PYFTAQW++RA DTVI+ +AHL+DQ
Sbjct: 90 CI-YKLYDYAYVKAEDGQPDFIAKIVELFETIDREPYFTAQWFFRAEDTVIKDHAHLVDQ 148
Query: 246 RRVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLAIPHCDYYCDMMYLLPYSTFFSL 305
+RVF+S++++DNPL+C+V K+ I +V N+DL K+ IP CD Y DM Y L + TF +L
Sbjct: 149 KRVFYSDMRDDNPLDCIVSKVEIVQVAPNVDLAEKEKTIPPCDLYYDMSYSLKHLTFANL 208
Query: 306 PPENKRVSSETSSTISSDVDANEC------------EVGEPQKMDVKLLDLYSGCGAMST 353
EN R S+ SSTISS++ N +V + Q + LLDLYSGCGAMST
Sbjct: 209 LTENSRTESDESSTISSEIGLNSTTDGINSAIGESSQVHKFQGSGMTLLDLYSGCGAMST 268
Query: 354 GLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWEKLCISF 413
GLCLGA+L+GL LVTRWAVDIN +AC+SLKLNHPETEVRNE+AEDFL+LL+EW LC F
Sbjct: 269 GLCLGASLSGLKLVTRWAVDINPHACESLKLNHPETEVRNEAAEDFLSLLKEWATLCEDF 328
Query: 414 SLIARKDPQQQLYSFNDDGESEEDDDNGNVEDESEDDSEIFEVEKILKICYGDPKEIKKR 473
SL+ + P+ N G +E+D +G+ FEV+K++ ICYGDP EI K
Sbjct: 329 SLLGSRRPEVVNPISNRSGSDDEEDADGDDGSPVPRGE--FEVKKLVAICYGDPNEINKP 386
Query: 474 GLYLKVRWRNYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQ 533
GLY KVRW+ YGPS+DTWEPIEGLS C + +KEFV G++S ILPLPGDVD ICGGPPCQ
Sbjct: 387 GLYFKVRWKGYGPSDDTWEPIEGLSKCKKSVKEFVKKGYRSSILPLPGDVDFICGGPPCQ 446
Query: 534 GVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALA 593
GVSGFNRFRN + PL D KN QL+VFMDIV++LKPK+VLMENVVDI+KFA G LGRYA+
Sbjct: 447 GVSGFNRFRNTEAPLDDPKNHQLVVFMDIVNYLKPKYVLMENVVDILKFAGGFLGRYAMG 506
Query: 594 RLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFE 653
RL+ MNYQ R+GMMAAG+YG+PQ+RMRVFLWGA P EKLPPY LPTHDV+ RGV+P EFE
Sbjct: 507 RLVSMNYQARLGMMAAGSYGVPQYRMRVFLWGAHPMEKLPPYPLPTHDVIGRGVVPNEFE 566
Query: 654 RNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQCFIRLRK 710
TV YD+ + +L + L L DAISDLP V NY +DE+PY++ TEFQ +IRLRK
Sbjct: 567 EITVGYDKSELCKLEKALFLGDAISDLPPVTNYNGQDEMPYNKAAHTEFQRYIRLRK 623
>gi|297841705|ref|XP_002888734.1| chromomethylase CMT3 [Arabidopsis lyrata subsp. lyrata]
gi|297334575|gb|EFH64993.1| chromomethylase CMT3 [Arabidopsis lyrata subsp. lyrata]
Length = 838
Score = 708 bits (1828), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/626 (58%), Positives = 456/626 (72%), Gaps = 20/626 (3%)
Query: 102 VNKNRSSSKKPIDSVKKLPVRGEHDDDDEPEARFLGDPVPDGEARQRWPKRYE---VKKQ 158
+ K R + K +VK+ PV+ ++ ++ ARFL +P+P+ EA+ WP RY+ V+K
Sbjct: 18 IPKPRKRAPKRAKTVKEEPVKFV-EEGEKYVARFLDEPIPESEAKSTWPDRYKPITVQKP 76
Query: 159 K---RRNQKDDDEEEIIQAKCHYMWAEVDGHITYDLFDDAHVKAESGEEDYICKIVEMFE 215
K R KDD++++II+A+CHY A VD Y+L DDA+V+A G + ++CKIVEMFE
Sbjct: 77 KAPSRNTTKDDEKDKIIRARCHYRRAIVDERQIYELNDDAYVQAGEGNQPFVCKIVEMFE 136
Query: 216 AVDGTPYFTAQWYYRARDTVIESNAHLIDQRRVFFSEIQNDNPLECLVKKLNIARVPLNI 275
+G YFTA+W+YRA DTV++ LID +RVFFSEI++ N L L KKLNI +PLN
Sbjct: 137 GANGKLYFTARWFYRADDTVMKQFKILIDDKRVFFSEIRDTNELGLLEKKLNILMIPLNE 196
Query: 276 DLEAKKLAIPHCDYYCDMMYLLPYSTFFSLPPENKRVSSETSSTISSDVDANE--CEVGE 333
+ A CDYYCDM YLLPY TF +L + K SE SSTISSD D NE + E
Sbjct: 197 NAAGPIAATKTCDYYCDMNYLLPYDTFEALQQDTKMAISE-SSTISSDTDVNEGAAAISE 255
Query: 334 PQ--------KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLN 385
Q + + LLDLYSGCGAMSTGLC+GA L+GLNLVT+WAVD+N +AC+SL N
Sbjct: 256 NQEGSQDTRVQRETTLLDLYSGCGAMSTGLCMGAQLSGLNLVTKWAVDMNAHACKSLGHN 315
Query: 386 HPETEVRNESAEDFLTLLREWEKLCISFSLIARKDPQQQLYSFNDDGESEEDDDNGNVED 445
HPET VRN SAEDFL LL+EWEKLCI FSL R P + Y + ED+++ + E
Sbjct: 316 HPETHVRNMSAEDFLFLLKEWEKLCIHFSL--RNSPNSEEYENLHGMTNVEDNEDVSEES 373
Query: 446 ESEDDSEIFEVEKILKICYGDPKEIKKRGLYLKVRWRNYGPSEDTWEPIEGLSNCGEKIK 505
+ EDD E+F VEKI+ I +G PK+++KRGLYLKVRW NY S DTWEPIEGLSNC EKIK
Sbjct: 374 DDEDDGEVFTVEKIVGISFGVPKKLQKRGLYLKVRWLNYDDSHDTWEPIEGLSNCREKIK 433
Query: 506 EFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDF 565
EFV G++S ILPLPG VDV+CGGPPCQG+SG NRFRN PL DEKNKQL+V+M+IV+F
Sbjct: 434 EFVKLGYESGILPLPGGVDVVCGGPPCQGISGHNRFRNLLEPLKDEKNKQLLVYMNIVEF 493
Query: 566 LKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWG 625
LKPK+VLMENVVD++K ++G L RYA+ RLIQMNYQVRMGMMAAGAYGL QFR+R FLWG
Sbjct: 494 LKPKYVLMENVVDMLKMSEGYLARYAVGRLIQMNYQVRMGMMAAGAYGLAQFRLRFFLWG 553
Query: 626 AQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDN 685
A P+ +P + LPTHD+V RG I EF+ NTVAYDEG +LA KLLL+D ISDLP+VDN
Sbjct: 554 ALPSMMIPQFPLPTHDLVQRGNIVKEFQGNTVAYDEGHTVKLADKLLLRDVISDLPAVDN 613
Query: 686 YESRDEIPYDREPETEFQCFIRLRKD 711
E RDEIPYD++P T FQ FIRLRKD
Sbjct: 614 SEQRDEIPYDQDPVTPFQQFIRLRKD 639
>gi|14647157|gb|AAK71870.1| chromomethylase 3 [Arabidopsis thaliana]
Length = 839
Score = 701 bits (1809), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/626 (56%), Positives = 452/626 (72%), Gaps = 20/626 (3%)
Query: 102 VNKNRSSSKKPIDSVKKLPVRGEHDDDDEPEARFLGDPVPDGEARQRWPKRYEV------ 155
+ K + + K +VK+ PV ++ ++ ARFL +P+P+ EA+ WP RY+
Sbjct: 18 IPKPKKRAPKRAKTVKEEPVT-VVEEGEKHVARFLDEPIPESEAKSTWPDRYKPIEVQPP 76
Query: 156 KKQKRRNQKDDDEEEIIQAKCHYMWAEVDGHITYDLFDDAHVKAESGEEDYICKIVEMFE 215
K R+ KDD++ EII+A+CHY A VD Y+L DDA+V++ G++ +ICKI+EMFE
Sbjct: 77 KASSRKKTKDDEKVEIIRARCHYRRAIVDERQIYELNDDAYVQSGEGKDPFICKIIEMFE 136
Query: 216 AVDGTPYFTAQWYYRARDTVIESNAHLIDQRRVFFSEIQNDNPLECLVKKLNIARVPLNI 275
V+G YFTA+W+YR DTV++ LI+++RVFFSEIQ+ N L L KKLNI +PLN
Sbjct: 137 GVNGKLYFTARWFYRPSDTVMKEFEILINKKRVFFSEIQDTNELGLLEKKLNILMIPLNE 196
Query: 276 DLEAKKLAIPHCDYYCDMMYLLPYSTFFSLPPENKRVSSETSSTISSDVDANE-----CE 330
+ + A +CD++CDM Y LPY TF ++ E SE SSTISSD D E E
Sbjct: 197 NTKETIPATENCDFFCDMNYFLPYDTFEAIQQETMMAISE-SSTISSDTDIREGAAAISE 255
Query: 331 VGE-----PQKMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLN 385
+GE + + LLDLYSGCGAMSTGLC+GA L+GLNLVT+WAVD+N +AC+SL+ N
Sbjct: 256 IGECSQETEGQKEATLLDLYSGCGAMSTGLCMGAQLSGLNLVTKWAVDMNAHACKSLQHN 315
Query: 386 HPETEVRNESAEDFLTLLREWEKLCISFSLIARKDPQQQLYSFNDDGESEEDDDNGNVED 445
HPET VRN +AEDFL LL+EWEKLCI FSL R P + Y+ + ED+++ + E
Sbjct: 316 HPETNVRNMTAEDFLFLLKEWEKLCIHFSL--RNSPNSEEYANLHGLNNVEDNEDVSEES 373
Query: 446 ESEDDSEIFEVEKILKICYGDPKEIKKRGLYLKVRWRNYGPSEDTWEPIEGLSNCGEKIK 505
E+EDD E+F V+KI+ I +G PK++ KRGLYLKVRW NY S DTWEPIEGLSNC KI
Sbjct: 374 ENEDDGEVFTVDKIVGISFGVPKKLLKRGLYLKVRWLNYDDSHDTWEPIEGLSNCRGKIG 433
Query: 506 EFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDF 565
EFV G+KS ILPLPG VDV+CGGPPCQG+SG NRFRN +PL D+KNKQL+V+M+IV++
Sbjct: 434 EFVKLGYKSGILPLPGGVDVVCGGPPCQGISGHNRFRNLLDPLEDQKNKQLLVYMNIVEY 493
Query: 566 LKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWG 625
LKPKFVLMENVVD++K AKG L R+A+ RL+QMNYQVR GMMAAGAYGL QFR+R FLWG
Sbjct: 494 LKPKFVLMENVVDMLKMAKGYLARFAVGRLLQMNYQVRNGMMAAGAYGLAQFRLRFFLWG 553
Query: 626 AQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDN 685
A P+E +P + LPTHD+V RG I EF+ N VAYDEG +LA KLLL+D ISDLP+V N
Sbjct: 554 ALPSEIIPQFPLPTHDLVHRGNIVKEFQGNIVAYDEGHTVKLADKLLLKDVISDLPAVAN 613
Query: 686 YESRDEIPYDREPETEFQCFIRLRKD 711
E RDEI YD++P T FQ FIRLRKD
Sbjct: 614 SEKRDEITYDKDPTTPFQKFIRLRKD 639
>gi|14583092|gb|AAK69756.1|AF383170_1 chromomethylase CMT3 [Arabidopsis thaliana]
Length = 839
Score = 699 bits (1803), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/626 (56%), Positives = 450/626 (71%), Gaps = 20/626 (3%)
Query: 102 VNKNRSSSKKPIDSVKKLPVRGEHDDDDEPEARFLGDPVPDGEARQRWPKRYEV------ 155
+ K + + K +VK+ PV ++ ++ ARFL +P+P+ EA+ WP RY+
Sbjct: 18 IPKPKKRAPKRAKTVKEEPVTVV-EEGEKHVARFLDEPIPESEAKSTWPDRYKPIEVQPP 76
Query: 156 KKQKRRNQKDDDEEEIIQAKCHYMWAEVDGHITYDLFDDAHVKAESGEEDYICKIVEMFE 215
K R+ KDD++ EII+A+CHY A VD Y+L DDA+V++ G++ +ICKI+EMFE
Sbjct: 77 KASSRKKTKDDEKVEIIRARCHYRRAIVDERQIYELNDDAYVQSGEGKDPFICKIIEMFE 136
Query: 216 AVDGTPYFTAQWYYRARDTVIESNAHLIDQRRVFFSEIQNDNPLECLVKKLNIARVPLNI 275
+G YFTA+W+YR DTV++ LI ++RVFFSEIQ+ N L L KKLNI +PLN
Sbjct: 137 GANGKLYFTARWFYRPSDTVMKEFEILIKEKRVFFSEIQDTNELGLLEKKLNILMIPLNE 196
Query: 276 DLEAKKLAIPHCDYYCDMMYLLPYSTFFSLPPENKRVSSETSSTISSDVDANE-----CE 330
+ + A +CD++CDM Y LPY TF ++ E SE SSTISSD D E E
Sbjct: 197 NTKETIPATENCDFFCDMNYFLPYDTFEAIQQETMMAISE-SSTISSDTDIREGAAAISE 255
Query: 331 VGEPQK-----MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLN 385
+GE + LLDLYSGCGAMSTGLC+GA L+GLNLVT+WAVD+N +AC+SL+ N
Sbjct: 256 IGECSQETEGHKKATLLDLYSGCGAMSTGLCMGAQLSGLNLVTKWAVDMNAHACKSLQHN 315
Query: 386 HPETEVRNESAEDFLTLLREWEKLCISFSLIARKDPQQQLYSFNDDGESEEDDDNGNVED 445
HPET VRN +AEDFL LL+EWEKLCI FSL R P + Y+ + ED+++ + E
Sbjct: 316 HPETNVRNMTAEDFLFLLKEWEKLCIHFSL--RNSPNSEEYANLHGLNNVEDNEDVSEES 373
Query: 446 ESEDDSEIFEVEKILKICYGDPKEIKKRGLYLKVRWRNYGPSEDTWEPIEGLSNCGEKIK 505
E+EDD E+F V+KI+ I +G PK++ KRGLYLKVRW NY S DTWEPIEGLSNC KI+
Sbjct: 374 ENEDDGEVFTVDKIVGISFGVPKKLLKRGLYLKVRWLNYDDSHDTWEPIEGLSNCRGKIE 433
Query: 506 EFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDF 565
EFV G+KS ILPLPG VDV+CGGPPCQG+SG NRFRN +PL D+KNKQL+V+M+IV++
Sbjct: 434 EFVKLGYKSGILPLPGGVDVVCGGPPCQGISGHNRFRNLLDPLEDQKNKQLLVYMNIVEY 493
Query: 566 LKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWG 625
LKPKFVLMENVVD++K AKG L R+A+ RL+QMNYQVR GMMAAGAYGL QFR+R FLWG
Sbjct: 494 LKPKFVLMENVVDMLKMAKGYLARFAVGRLLQMNYQVRNGMMAAGAYGLAQFRLRFFLWG 553
Query: 626 AQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDN 685
A P+E +P + LPTHD+V RG I EF+ N VAYDEG +LA KLLL+D ISDLP+V N
Sbjct: 554 ALPSEIIPQFPLPTHDLVHRGNIVKEFQGNIVAYDEGHTVKLADKLLLKDVISDLPAVAN 613
Query: 686 YESRDEIPYDREPETEFQCFIRLRKD 711
E RDEI YD++P T FQ FIRLRKD
Sbjct: 614 SEKRDEITYDKDPTTPFQKFIRLRKD 639
>gi|15222449|ref|NP_177135.1| DNA (cytosine-5)-methyltransferase CMT3 [Arabidopsis thaliana]
gi|110832800|sp|Q94F88.2|CMT3_ARATH RecName: Full=DNA (cytosine-5)-methyltransferase CMT3; AltName:
Full=Chromomethylase 3; AltName: Full=Protein
CHROMOMETHYLASE 3
gi|12325192|gb|AAG52543.1|AC013289_10 putative chromomethylase; 17383-22406 [Arabidopsis thaliana]
gi|332196852|gb|AEE34973.1| DNA (cytosine-5)-methyltransferase CMT3 [Arabidopsis thaliana]
Length = 839
Score = 698 bits (1802), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/626 (56%), Positives = 450/626 (71%), Gaps = 20/626 (3%)
Query: 102 VNKNRSSSKKPIDSVKKLPVRGEHDDDDEPEARFLGDPVPDGEARQRWPKRYEV------ 155
+ K + + K +VK+ PV ++ ++ ARFL +P+P+ EA+ WP RY+
Sbjct: 18 IPKPKKRAPKRAKTVKEEPVTVV-EEGEKHVARFLDEPIPESEAKSTWPDRYKPIEVQPP 76
Query: 156 KKQKRRNQKDDDEEEIIQAKCHYMWAEVDGHITYDLFDDAHVKAESGEEDYICKIVEMFE 215
K R+ KDD++ EII+A+CHY A VD Y+L DDA+V++ G++ +ICKI+EMFE
Sbjct: 77 KASSRKKTKDDEKVEIIRARCHYRRAIVDERQIYELNDDAYVQSGEGKDPFICKIIEMFE 136
Query: 216 AVDGTPYFTAQWYYRARDTVIESNAHLIDQRRVFFSEIQNDNPLECLVKKLNIARVPLNI 275
+G YFTA+W+YR DTV++ LI ++RVFFSEIQ+ N L L KKLNI +PLN
Sbjct: 137 GANGKLYFTARWFYRPSDTVMKEFEILIKKKRVFFSEIQDTNELGLLEKKLNILMIPLNE 196
Query: 276 DLEAKKLAIPHCDYYCDMMYLLPYSTFFSLPPENKRVSSETSSTISSDVDANE-----CE 330
+ + A +CD++CDM Y LPY TF ++ E SE SSTISSD D E E
Sbjct: 197 NTKETIPATENCDFFCDMNYFLPYDTFEAIQQETMMAISE-SSTISSDTDIREGAAAISE 255
Query: 331 VGEPQK-----MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLN 385
+GE + LLDLYSGCGAMSTGLC+GA L+GLNLVT+WAVD+N +AC+SL+ N
Sbjct: 256 IGECSQETEGHKKATLLDLYSGCGAMSTGLCMGAQLSGLNLVTKWAVDMNAHACKSLQHN 315
Query: 386 HPETEVRNESAEDFLTLLREWEKLCISFSLIARKDPQQQLYSFNDDGESEEDDDNGNVED 445
HPET VRN +AEDFL LL+EWEKLCI FSL R P + Y+ + ED+++ + E
Sbjct: 316 HPETNVRNMTAEDFLFLLKEWEKLCIHFSL--RNSPNSEEYANLHGLNNVEDNEDVSEES 373
Query: 446 ESEDDSEIFEVEKILKICYGDPKEIKKRGLYLKVRWRNYGPSEDTWEPIEGLSNCGEKIK 505
E+EDD E+F V+KI+ I +G PK++ KRGLYLKVRW NY S DTWEPIEGLSNC KI+
Sbjct: 374 ENEDDGEVFTVDKIVGISFGVPKKLLKRGLYLKVRWLNYDDSHDTWEPIEGLSNCRGKIE 433
Query: 506 EFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDF 565
EFV G+KS ILPLPG VDV+CGGPPCQG+SG NRFRN +PL D+KNKQL+V+M+IV++
Sbjct: 434 EFVKLGYKSGILPLPGGVDVVCGGPPCQGISGHNRFRNLLDPLEDQKNKQLLVYMNIVEY 493
Query: 566 LKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWG 625
LKPKFVLMENVVD++K AKG L R+A+ RL+QMNYQVR GMMAAGAYGL QFR+R FLWG
Sbjct: 494 LKPKFVLMENVVDMLKMAKGYLARFAVGRLLQMNYQVRNGMMAAGAYGLAQFRLRFFLWG 553
Query: 626 AQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDN 685
A P+E +P + LPTHD+V RG I EF+ N VAYDEG +LA KLLL+D ISDLP+V N
Sbjct: 554 ALPSEIIPQFPLPTHDLVHRGNIVKEFQGNIVAYDEGHTVKLADKLLLKDVISDLPAVAN 613
Query: 686 YESRDEIPYDREPETEFQCFIRLRKD 711
E RDEI YD++P T FQ FIRLRKD
Sbjct: 614 SEKRDEITYDKDPTTPFQKFIRLRKD 639
>gi|110739012|dbj|BAF01425.1| putative chromomethylase [Arabidopsis thaliana]
Length = 839
Score = 696 bits (1796), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/626 (56%), Positives = 449/626 (71%), Gaps = 20/626 (3%)
Query: 102 VNKNRSSSKKPIDSVKKLPVRGEHDDDDEPEARFLGDPVPDGEARQRWPKRYEV------ 155
+ K + + K +VK+ PV ++ ++ ARFL +P+P+ EA+ WP RY+
Sbjct: 18 IPKPKKRAPKRAKTVKEEPVT-VVEEGEKHVARFLDEPIPESEAKSTWPDRYKPIEVQPP 76
Query: 156 KKQKRRNQKDDDEEEIIQAKCHYMWAEVDGHITYDLFDDAHVKAESGEEDYICKIVEMFE 215
K R+ KDD++ EII+A+CHY A V Y+L DDA+V++ G++ +ICKI+EMFE
Sbjct: 77 KASSRKKTKDDEKVEIIRARCHYRRAIVGERQIYELNDDAYVQSGEGKDPFICKIIEMFE 136
Query: 216 AVDGTPYFTAQWYYRARDTVIESNAHLIDQRRVFFSEIQNDNPLECLVKKLNIARVPLNI 275
+G YFTA+W+YR DTV++ LI ++RVFFSEIQ+ N L L KKLNI +PLN
Sbjct: 137 GANGKLYFTARWFYRPSDTVMKEFEILIKKKRVFFSEIQDTNELGLLEKKLNILMIPLNE 196
Query: 276 DLEAKKLAIPHCDYYCDMMYLLPYSTFFSLPPENKRVSSETSSTISSDVDANE-----CE 330
+ + A +CD++CDM Y LPY TF ++ E SE SSTISSD D E E
Sbjct: 197 NTKETIPATENCDFFCDMNYFLPYDTFEAIQQETMMAISE-SSTISSDTDIREGAAAISE 255
Query: 331 VGEPQK-----MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLN 385
+GE + LLDLYSGCGAMSTGLC+GA L+GLNLVT+WAVD+N +AC+SL+ N
Sbjct: 256 IGECSQETEGHKKATLLDLYSGCGAMSTGLCMGAQLSGLNLVTKWAVDMNAHACKSLQHN 315
Query: 386 HPETEVRNESAEDFLTLLREWEKLCISFSLIARKDPQQQLYSFNDDGESEEDDDNGNVED 445
HPET VRN +AEDFL LL+EWEKLCI FSL R P + Y+ + ED+++ + E
Sbjct: 316 HPETNVRNMTAEDFLFLLKEWEKLCIHFSL--RNSPNSEEYANLHGLNNVEDNEDVSEES 373
Query: 446 ESEDDSEIFEVEKILKICYGDPKEIKKRGLYLKVRWRNYGPSEDTWEPIEGLSNCGEKIK 505
E+EDD E+F V+KI+ I +G PK++ KRGLYLKVRW NY S DTWEPIEGLSNC KI+
Sbjct: 374 ENEDDGEVFTVDKIVGISFGVPKKLLKRGLYLKVRWLNYDDSHDTWEPIEGLSNCRGKIE 433
Query: 506 EFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDF 565
EFV G+KS ILPLPG VDV+CGGPPCQG+SG NRFRN +PL D+KNKQL+V+M+IV++
Sbjct: 434 EFVKLGYKSGILPLPGGVDVVCGGPPCQGISGHNRFRNLLDPLEDQKNKQLLVYMNIVEY 493
Query: 566 LKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWG 625
LKPKFVLMENVVD++K AKG L R+A+ RL+QMNYQVR GMMAAGAYGL QFR+R FLWG
Sbjct: 494 LKPKFVLMENVVDMLKMAKGYLARFAVGRLLQMNYQVRNGMMAAGAYGLAQFRLRFFLWG 553
Query: 626 AQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDN 685
A P+E +P + LPTHD+V RG I EF+ N VAYDEG +LA KLLL+D ISDLP+V N
Sbjct: 554 ALPSEIIPQFPLPTHDLVHRGNIVKEFQGNIVAYDEGHTVKLADKLLLKDVISDLPAVAN 613
Query: 686 YESRDEIPYDREPETEFQCFIRLRKD 711
E RDEI YD++P T FQ FIRLRKD
Sbjct: 614 SEKRDEITYDKDPTTPFQKFIRLRKD 639
>gi|169977312|emb|CAQ18903.1| chromomethylase [Nicotiana sylvestris]
gi|169977314|emb|CAQ18904.1| chromomethylase [Nicotiana sylvestris]
gi|169977316|emb|CAQ18905.1| chromomethylase [Nicotiana sylvestris]
gi|169977318|emb|CAQ18906.1| chromomethylase [Nicotiana sylvestris]
Length = 741
Score = 695 bits (1794), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/548 (62%), Positives = 419/548 (76%), Gaps = 5/548 (0%)
Query: 166 DDEEEIIQAKCHYMWAEVDGHITYDLFDDAHVKAESGEEDYICKIVEMFEAVDGTPYFTA 225
DD +++IQAKCH+ A VDG I Y+L DDA+V+A + E+DYICKIVE F+AVDG YFTA
Sbjct: 7 DDADQLIQAKCHFAQAVVDGQI-YNLGDDAYVQASNDEDDYICKIVEFFQAVDGMQYFTA 65
Query: 226 QWYYRARDTVIESNAHLIDQRRVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLAIP 285
QW+YRA+DTVI+++ I+ +RVFFSEI++DNPL CLVKK+ I +P N+ L K+
Sbjct: 66 QWFYRAKDTVIKAHDQFINNKRVFFSEIKDDNPLGCLVKKIKIVPIPSNVRLPLKESLRS 125
Query: 286 HCDYYCDMMYLLPYSTFFSLPPENKRVSSETSSTISSDVDANECEVGEPQKMDVKLLDLY 345
+ DYY DMMYLLPYS+F SLP + VSS S + S+ ++ + QK++ LLDLY
Sbjct: 126 NSDYYYDMMYLLPYSSFVSLP---QDVSSPISESDSTISSDSDTVDVKEQKLEKNLLDLY 182
Query: 346 SGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLRE 405
SGCGAMSTGLCLGA++ G+ LVT+WAVD+N+YAC SLK NHPET VRNESA+DFL LLRE
Sbjct: 183 SGCGAMSTGLCLGADIGGVKLVTKWAVDLNQYACDSLKWNHPETAVRNESADDFLLLLRE 242
Query: 406 WEKLCISFSLIARKDPQQQLYSFNDDGESEEDDDNGNVEDESEDD-SEIFEVEKILKICY 464
W +LC S SL+ P D+ E + +D+ E +D+ EIFEVE++L+ICY
Sbjct: 243 WRQLCASCSLLRNNTPTHPFLKVRDEDEEDNNDNGDEDEGSGDDEQGEIFEVEELLEICY 302
Query: 465 GDPKEIKKRGLYLKVRWRNYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDVD 524
GDPKEI K GLY KVRW+ YG EDTWEPIEGL C EKIK+FV GFK+ ILPLPG+V+
Sbjct: 303 GDPKEINKPGLYFKVRWKGYGQEEDTWEPIEGLDGCQEKIKDFVAKGFKASILPLPGEVE 362
Query: 525 VICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAK 584
VICGGPPCQGVSGFNRFRN NPL D KNKQL FMDIV+FL P+FVLMENVVD+VKFA
Sbjct: 363 VICGGPPCQGVSGFNRFRNSKNPLGDSKNKQLETFMDIVEFLNPRFVLMENVVDLVKFAD 422
Query: 585 GLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVL 644
G LGRYAL RL+ MNYQ RMGMM AGAYGLPQFR RVF+WGA P+EKLP Y LPTH+VV+
Sbjct: 423 GFLGRYALGRLVGMNYQTRMGMMVAGAYGLPQFRRRVFMWGALPSEKLPQYPLPTHNVVV 482
Query: 645 RGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQC 704
RG +P EFE N VAYDE + EL R+L L+DAISDLP V+N E +DE+PY EP++ FQ
Sbjct: 483 RGGMPKEFELNVVAYDEALKVELKRELFLKDAISDLPPVENDEPKDEMPYIDEPKSAFQH 542
Query: 705 FIRLRKDG 712
FIR R+DG
Sbjct: 543 FIRSRRDG 550
>gi|388890583|gb|AFK80345.1| chromomethylase 3 [Nicotiana benthamiana]
Length = 740
Score = 689 bits (1777), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/547 (61%), Positives = 414/547 (75%), Gaps = 4/547 (0%)
Query: 166 DDEEEIIQAKCHYMWAEVDGHITYDLFDDAHVKAESGEEDYICKIVEMFEAVDGTPYFTA 225
DD + +IQAKCH+ A VDG I Y+L DDA+V+A + E+DYICKIVE F+AVDGT YFTA
Sbjct: 7 DDADHLIQAKCHFTQAVVDGQI-YNLGDDAYVQASNDEDDYICKIVEFFQAVDGTQYFTA 65
Query: 226 QWYYRARDTVIESNAHLIDQRRVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLAIP 285
QW+YRA+DTVI+++ ID +RVFFSEI++DNPL CLVKK+ I +P N+ L K+
Sbjct: 66 QWFYRAKDTVIKAHDQFIDNKRVFFSEIKDDNPLGCLVKKIKIVPIPSNVRLPLKESLKS 125
Query: 286 HCDYYCDMMYLLPYSTFFSLPPENKRVSSETSSTISSDVDANECEVGEPQKMDVKLLDLY 345
+ DYY DMMYLLPYS+F SLP + VSS S + S+ ++ + QK+++ LLDLY
Sbjct: 126 NSDYYYDMMYLLPYSSFVSLPQD---VSSPISESDSTISSDSDTVDVKEQKLEMNLLDLY 182
Query: 346 SGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLRE 405
SGCGAMSTGLCLGA++ G+ LVT+WAVD+N+YAC SLK NHPET VRNESA+DFL LL E
Sbjct: 183 SGCGAMSTGLCLGADIGGVKLVTKWAVDLNQYACDSLKWNHPETAVRNESADDFLLLLGE 242
Query: 406 WEKLCISFSLIARKDPQQQLYSFNDDGESEEDDDNGNVEDESEDDSEIFEVEKILKICYG 465
W +LC S SL+ P D+ E + ++++ + ++ EIFEVE++L+ICYG
Sbjct: 243 WRQLCASCSLLRNNSPTHPFLKVRDEDEEDNNNEDEDEGSGDDEQGEIFEVEELLEICYG 302
Query: 466 DPKEIKKRGLYLKVRWRNYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDVDV 525
DPKEI K GLY KVRW+ YG EDTWEPIEG C EKIK+FVT GFK+ ILPLPG+V V
Sbjct: 303 DPKEINKPGLYFKVRWKGYGQEEDTWEPIEGFDGCQEKIKDFVTKGFKASILPLPGEVAV 362
Query: 526 ICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKG 585
ICGGPPCQGVSGFNRFRN NPL D KNKQL FMDIV+FL P+FVLMENVVD+VKFA G
Sbjct: 363 ICGGPPCQGVSGFNRFRNSKNPLGDSKNKQLETFMDIVEFLNPRFVLMENVVDLVKFADG 422
Query: 586 LLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLR 645
LGRYAL RL+ M+YQ RMGMM AGAYGLPQFR RVF+WGA P+E LP Y LPTH+VV+R
Sbjct: 423 FLGRYALGRLVGMDYQARMGMMVAGAYGLPQFRRRVFMWGALPSENLPQYPLPTHNVVVR 482
Query: 646 GVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQCF 705
G +P EFE N VAYDE ++ + L+DAISDLP V+N E RDE+PY EP++ FQ F
Sbjct: 483 GGMPKEFELNVVAYDEALKSRAKERTFLKDAISDLPPVENDEPRDEMPYIDEPKSAFQHF 542
Query: 706 IRLRKDG 712
IR R+DG
Sbjct: 543 IRSRRDG 549
>gi|255579031|ref|XP_002530367.1| protein with unknown function [Ricinus communis]
gi|223530114|gb|EEF32028.1| protein with unknown function [Ricinus communis]
Length = 845
Score = 683 bits (1762), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/603 (57%), Positives = 446/603 (73%), Gaps = 31/603 (5%)
Query: 135 FLGDPVPDGEARQRWPKRYEVKKQKRRN---------QKDDDEEEIIQAKCHYMWAEVDG 185
F+G+P+ EAR++WP+RY+ + K +N KDDD + QAKCHY A VDG
Sbjct: 50 FIGNPISATEARKKWPQRYKSQISKVKNGSEPQNGVLSKDDD---VTQAKCHYKQAMVDG 106
Query: 186 HITYDLFDDAHVKAESGEEDYICKIVEMFEAVDGTPYFTAQWYYRARDTVIESNAHLIDQ 245
I YDL DDA+VKAE G+ DYI +IVEMFE++DG P FTAQW+YRA DTVI+ +
Sbjct: 107 -ILYDLGDDAYVKAEDGKPDYIARIVEMFESIDGEPLFTAQWFYRAEDTVIKDYVKTAES 165
Query: 246 RRVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLAIPHCDYYCDMMYLLPYSTFFSL 305
RRVF SEI++DNPL+C+V K+ IA V N+DL K+ +P CD Y DM Y LP+ T+ ++
Sbjct: 166 RRVFLSEIRDDNPLDCIVSKVKIALVEPNLDLAEKERNLPPCDLYYDMKYTLPFLTYETI 225
Query: 306 PPENKRVSSETSSTISSDVDANEC----------------EVGEPQKMDVKLLDLYSGCG 349
++ S +SSTISS+ D+N +V +K ++ LLDLYSGCG
Sbjct: 226 KTDDSGRDSGSSSTISSENDSNNSIDDVKVTTAKPLKVLSKVHSSEKSELYLLDLYSGCG 285
Query: 350 AMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWEKL 409
AMSTGLC+GA+L+G+ LVT+WAVDIN +AC+SLK NHPETEVRNE+AEDFL+LL+EWEKL
Sbjct: 286 AMSTGLCMGASLSGVKLVTKWAVDINAFACKSLKTNHPETEVRNEAAEDFLSLLKEWEKL 345
Query: 410 CISFSLI-ARKDPQQQLYSFNDDGESEEDDDNGNVEDESEDDSE-IFEVEKILKICYGDP 467
C FSL + K P+Q S +D+ E +E+++ + +DD + IFEVEK+L +CYGDP
Sbjct: 346 CRKFSLFGSEKHPEQSSNSASDEEEEDEEEEEEEKGKDKDDDDDEIFEVEKLLAVCYGDP 405
Query: 468 KEIKKRGLYLKVRWRNYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDVDVIC 527
++ KRGLY KVRW+ YGPSEDTWEPIEGLS+C +K+KEFVT GF+SKILPLPGD D IC
Sbjct: 406 NKVNKRGLYFKVRWKGYGPSEDTWEPIEGLSDCKDKLKEFVTKGFRSKILPLPGDADFIC 465
Query: 528 GGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLL 587
GGPPCQG+SGFNRFRN PL D KN Q++V+MDIV++LKPK+VLMENVVDI++FA G L
Sbjct: 466 GGPPCQGISGFNRFRNTKAPLDDPKNHQMVVYMDIVEYLKPKYVLMENVVDILRFAGGFL 525
Query: 588 GRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGV 647
RYAL RLI MNYQ R+GMMAAG+YGLPQFRMRVF+WG+QP+E LP Y LPTH+VV++G
Sbjct: 526 VRYALGRLISMNYQARLGMMAAGSYGLPQFRMRVFMWGSQPSESLPQYPLPTHEVVVKGG 585
Query: 648 IPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQCFIR 707
IP EFE TVAY++ +L + L L DAI DLP V+N ES+DE Y P+++FQ +IR
Sbjct: 586 IPNEFEEITVAYNKLDPCQLEKALYLGDAILDLPPVNNDESQDERKYGTTPQSDFQKYIR 645
Query: 708 LRK 710
L+K
Sbjct: 646 LKK 648
>gi|356540854|ref|XP_003538899.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Glycine max]
Length = 830
Score = 680 bits (1755), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/628 (54%), Positives = 445/628 (70%), Gaps = 29/628 (4%)
Query: 104 KNRSSSKKPIDSVKKLPV---RGEHDDDDEPEARFLGDPVPDGEARQRWPKRYEVKKQKR 160
K +S D+V LP + +H + + A F G P+P EA +WP RY + +K+
Sbjct: 5 KTSDASDAQDDTVSLLPSQRNKAKHPNSNS-NACFAGKPIPPAEALAKWPHRYPSEGKKK 63
Query: 161 RNQKDDDE-----EEIIQAKCHYMWAEVDGHITYDLFDDAHVKAESGEEDYICKIVEMFE 215
+ + E E++ A+CHY A+VDG + Y+L+DDA+VKAE G+ DYI +IVEMFE
Sbjct: 64 GSARTSKEATSENSEVMPARCHYRQAKVDG-VVYNLYDDAYVKAEDGKPDYIARIVEMFE 122
Query: 216 AVDGTPYFTAQWYYRARDTV---IESNAHLIDQRRVFFSEIQNDNPLECLVKKLNIARVP 272
VD FTAQW+YRA DTV I+++ L+D++R+F S++++ NPL+C+V K+ I +
Sbjct: 123 TVDKEQCFTAQWFYRAEDTVMQVIKNHGDLVDKKRIFISDVKDVNPLDCIVSKVKIYKKS 182
Query: 273 LNIDLEAKKLAIPHCDYYCDMMYLLPYSTFFSLPPENKRVSSETSSTISSDVDAN----- 327
++DL +KK +P CDYY DM Y +PY TF ++ E+ S+ +S + S+ +N
Sbjct: 183 PSVDLTSKKGKLPSCDYYYDMKYTVPYLTFSNIVNESDASSTISSESGSNGCVSNANLAN 242
Query: 328 --ECEVGEPQKMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLN 385
+ + LLDLYSGCGAMSTGLC GA+LAG+ LVTRWAVDIN +AC+SLKLN
Sbjct: 243 GKTTQNNSSGSSEWTLLDLYSGCGAMSTGLCFGASLAGIKLVTRWAVDINAHACESLKLN 302
Query: 386 HPETEVRNESAEDFLTLLREWEKLCISFSLIARKDPQQQLYSFNDDGESEEDDDNGNVED 445
HPET+VRNE AEDFL L++ W KLC F+L+ + + D + +ED++ ++
Sbjct: 303 HPETQVRNEPAEDFLNLIKSWAKLCEEFALLGSE-------RLDSDPDMDEDENEAVRKE 355
Query: 446 ES--EDDSEIFEVEKILKICYGDPKEIKKRGLYLKVRWRNYGPSEDTWEPIEGLSNCGEK 503
ES + DSE FEVEK+L +CYGDP ++KK GLY KVRW Y S DTWEPIEGLS+C E
Sbjct: 356 ESGNQSDSEEFEVEKLLAVCYGDPNDVKKPGLYFKVRWLGYASSYDTWEPIEGLSDCKEA 415
Query: 504 IKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIV 563
+K+FVT G+K ++LPLPGD + ICGGPPCQGVSGFNRFRN PL D KNKQL+V+MDI+
Sbjct: 416 MKDFVTKGYKKRLLPLPGDANFICGGPPCQGVSGFNRFRNAAAPLEDTKNKQLLVYMDII 475
Query: 564 DFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFL 623
DFLKPK+VLMENVVDI++F+ G LGRYA+ RL+ MNYQ RMGMMAAG+YGLPQFRMRVFL
Sbjct: 476 DFLKPKYVLMENVVDILRFSGGYLGRYAICRLVAMNYQARMGMMAAGSYGLPQFRMRVFL 535
Query: 624 WGAQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSV 683
WGA+PTEKLPPY LPTH+VV RG +PTEFE TVAYD+ LA LLL+DAISDLP V
Sbjct: 536 WGARPTEKLPPYPLPTHEVVSRGSVPTEFEEITVAYDKKDTCHLAGALLLEDAISDLPHV 595
Query: 684 DNYESRDEIPYDREPETEFQCFIRLRKD 711
N E++DE Y+ ETEFQ +IRL+K+
Sbjct: 596 TNDENQDERNYEAPSETEFQKYIRLKKN 623
>gi|27529842|dbj|BAC53936.1| chromomethylase-like protein [Nicotiana tabacum]
Length = 741
Score = 676 bits (1744), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/548 (61%), Positives = 410/548 (74%), Gaps = 5/548 (0%)
Query: 166 DDEEEIIQAKCHYMWAEVDGHITYDLFDDAHVKAESGEEDYICKIVEMFEAVDGTPYFTA 225
DD +++IQAKCH+ A VDG I Y+L DDA+V+A S E+DYICKIVE F+AVDG YFTA
Sbjct: 7 DDGDQLIQAKCHFTQAVVDGQI-YNLGDDAYVQASSDEDDYICKIVEFFQAVDGMQYFTA 65
Query: 226 QWYYRARDTVIESNAHLIDQRRVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLAIP 285
QW+YRA+DTVI+++ ID +RVFFSEI++DNPL CLVKK+ I +P N+ K+
Sbjct: 66 QWFYRAKDTVIKAHDQFIDNKRVFFSEIKDDNPLGCLVKKIKIVAIPSNVRPPLKESLRS 125
Query: 286 HCDYYCDMMYLLPYSTFFSLPPENKRVSSETSSTISSDVDANECEVGEPQKMDVKLLDLY 345
+ DYY DMMYLLPYS+F SLP + VSS S + S+ ++ + QK++ LLDLY
Sbjct: 126 NSDYYYDMMYLLPYSSFVSLP---QDVSSPISESDSTISSDSDTVDVKEQKLEKNLLDLY 182
Query: 346 SGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLRE 405
SGCGAMSTGLCLGA++ G+ LVT+WAVD+N+YAC SLK NHPET VRNESA+DFL LLRE
Sbjct: 183 SGCGAMSTGLCLGADIGGVKLVTKWAVDLNQYACDSLKWNHPETAVRNESADDFLLLLRE 242
Query: 406 WEKLCISFSLIARKDPQQQLYSFNDDGESEEDDDNGNVEDESEDD-SEIFEVEKILKICY 464
W +LC S SL+ P D+ + +++D+ E +D+ EIFEVE++L+ICY
Sbjct: 243 WRQLCASCSLLRNNTPTHSFLKVRDEDDKDDNDNEDEDEGSGDDEQGEIFEVEQLLEICY 302
Query: 465 GDPKEIKKRGLYLKVRWRNYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDVD 524
GDPKE K GLY KVRW+ YG EDTWEPIEGL C EKIK+FV GFK+ ILPLPG+V
Sbjct: 303 GDPKEKNKPGLYFKVRWKGYGQEEDTWEPIEGLDGCQEKIKDFVAKGFKASILPLPGEVQ 362
Query: 525 VICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAK 584
VICGGPPCQGVSGFNRFRN NPL D KNKQL FMDIV+FL P+FVLMENVVD+VKFA
Sbjct: 363 VICGGPPCQGVSGFNRFRNSTNPLGDSKNKQLETFMDIVEFLNPRFVLMENVVDLVKFAD 422
Query: 585 GLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVL 644
G LGRYAL RL+ MNYQ RMGMM AGAYGLPQFR R +WGA P+E LP Y LPTH+VV+
Sbjct: 423 GFLGRYALGRLVGMNYQARMGMMVAGAYGLPQFRRRASMWGALPSETLPQYPLPTHNVVV 482
Query: 645 RGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQC 704
RG +P FE N VAYDE EL R+L L+DAIS LP V++ E DE+PY EP++ FQ
Sbjct: 483 RGEMPKAFEFNVVAYDEALTVELKRELFLKDAISALPPVEHDEPTDEMPYIDEPKSAFQH 542
Query: 705 FIRLRKDG 712
FIR R++G
Sbjct: 543 FIRSRRNG 550
>gi|356495335|ref|XP_003516534.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Glycine max]
Length = 834
Score = 671 bits (1731), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/601 (56%), Positives = 430/601 (71%), Gaps = 28/601 (4%)
Query: 131 PEARFLGDPVPDGEARQRWPKRY--EVKKQ---KRRNQKDDDEEEIIQAKCHYMWAEVDG 185
P+A F+G P+P EAR +WP RY EVKK+ + + + E++ A+CHY A+VDG
Sbjct: 36 PDACFVGKPIPSAEARAKWPHRYPSEVKKKAPARSSEEVTSENSEVMLARCHYRQAKVDG 95
Query: 186 HITYDLFDDAHVKAESGEEDYICKIVEMFEAVDGTPYFTAQWYYRARDTV---IESNAHL 242
+ Y+L+DDA+VKAE G+ DYI +IVEMFE VD F AQW+YRA DTV I+++ L
Sbjct: 96 -VVYNLYDDAYVKAEDGKPDYIARIVEMFETVDKEQCFMAQWFYRAEDTVMQVIKNHGDL 154
Query: 243 IDQRRVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLAIPHCDYYCDMMYLLPYSTF 302
+D++RVF S++++ NPL+C+V K+ I + ++DL +KK +P CDYY DM Y +PY TF
Sbjct: 155 VDKKRVFISDVKDVNPLDCIVSKVKIFKKNPSVDLASKKAKLPFCDYYYDMKYTVPYLTF 214
Query: 303 FSLPPENKRVSSETSST-------ISSDVDANECEVGEPQKMDV-----KLLDLYSGCGA 350
+L N + S+ SST I +AN + Q LLDLYSGCGA
Sbjct: 215 SNL--VNGKNDSDASSTISSESGSIGCVNNANLAKRKTTQNNSSGSSQWTLLDLYSGCGA 272
Query: 351 MSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWEKLC 410
MSTGLCLGA+LAG+ LVT WAVDIN +AC+SLKLNHPET VRNE AEDFL L++ W KLC
Sbjct: 273 MSTGLCLGASLAGIKLVTMWAVDINAHACKSLKLNHPETHVRNEPAEDFLNLIKAWAKLC 332
Query: 411 ISFSLIARKDPQQQLYSFNDDGESEEDDDNGNVEDESEDDSEIFEVEKILKICYGDPKEI 470
F+L+ + D+ E+ + +++GN + D E FEVEK+L +CYGDP +
Sbjct: 333 EEFALLGSERSDSDPDMDEDENEAVQKEESGN-----QSDLEEFEVEKLLAVCYGDPNGV 387
Query: 471 KKRGLYLKVRWRNYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDVDVICGGP 530
KK GLY KVRW Y S DTWEPI+GLS+C E +K+FVT G+K ++LPLPGD + ICGGP
Sbjct: 388 KKPGLYFKVRWLGYDSSYDTWEPIDGLSDCKEVMKDFVTKGYKKRLLPLPGDANFICGGP 447
Query: 531 PCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRY 590
PCQGVSGFNRFRN + PL D KNKQL+V+MDI+DFLKPK+VLMENVVDI+KF+ G LGRY
Sbjct: 448 PCQGVSGFNRFRNAEAPLEDTKNKQLLVYMDIIDFLKPKYVLMENVVDILKFSGGYLGRY 507
Query: 591 ALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPT 650
A+ RL+ MNYQ RMGMMAAG+YGLPQFRMRVFLWGA+PTE+LPPY LPTH+VV RG +PT
Sbjct: 508 AIGRLVAMNYQARMGMMAAGSYGLPQFRMRVFLWGARPTEQLPPYPLPTHEVVSRGFVPT 567
Query: 651 EFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQCFIRLRK 710
EFE TVAYD+ +LA LLL DAISDLP V N E++DE Y TEFQ +IRL+K
Sbjct: 568 EFEEITVAYDKKDTCQLAGALLLDDAISDLPPVTNDENQDERNYGAPARTEFQRYIRLKK 627
Query: 711 D 711
+
Sbjct: 628 N 628
>gi|411012961|gb|AFV99137.1| CMT-type cytosine DNA-methyltransferase 3c [Malus x domestica]
Length = 974
Score = 662 bits (1707), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/597 (56%), Positives = 430/597 (72%), Gaps = 49/597 (8%)
Query: 99 GVKVNKNRSSSKKPIDSVKKLPVRGEHDDDDEPEARFLGDPVPDGEARQRWPKRYEVKKQ 158
V K S +KP+ P D+D E+RF+G P+ D EAR+++PKRY +K
Sbjct: 203 ATSVEKAASPPRKPVTQEVAAP------DEDGEESRFIGKPMEDEEARKQYPKRYAGEKP 256
Query: 159 KRRNQKD-DDEEEIIQAKCHYMWAEVDGHITYDLFDDAHVKAESGEEDYICKIVEMFEAV 217
+R Q + +D+E+IIQA+CHY A VDG I+YDL+DDAHV+ E+ EE YICKIVEMFEA+
Sbjct: 257 QRNGQNNSNDDEDIIQARCHYTKALVDG-ISYDLYDDAHVQGETKEEPYICKIVEMFEAI 315
Query: 218 DGTPYFTAQWYYRARDTVIESNAHLIDQRRVFFSEIQNDNPLECLVKKLNIARVPLNIDL 277
G YFTAQWYYR+RDTVI+ A + RVFFS++++DNPL+CLV+KL+I R+ LN+D
Sbjct: 316 GGLLYFTAQWYYRSRDTVIKHCA-TVACGRVFFSDVRDDNPLDCLVEKLHIVRLTLNVDE 374
Query: 278 EAKKLAIPHCDYYCDMMYLLPYSTFFSLPPENKRVSSETSSTISSDVDANECEVGEPQKM 337
+ K +IP C+YYCD YLLPYSTF +LP EN + S+ STIS + D V ++
Sbjct: 375 DVKSKSIPVCNYYCDTKYLLPYSTFVNLPTENMQSGSD-DSTISVEDD-----VCLDSEV 428
Query: 338 DVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAE 397
D KL S G+C + RWAVD NE AC+SL+ NHPETEVRNE+AE
Sbjct: 429 DSKL----------SNGVCAKSE--------RWAVDYNEXACKSLEQNHPETEVRNEAAE 470
Query: 398 DFLTLLREWEKLCISFSLIA----RKDPQQQLYSF--------NDDGESEEDDDNGNVED 445
DFLT+L+EW KLC+ L+ +D ++ + F +GE EE+D +GN
Sbjct: 471 DFLTMLKEWRKLCMCLKLVETDNLEEDVEKSMLEFFRKEDDEVEXEGEEEEEDVSGN--- 527
Query: 446 ESEDDSEIFEVEKILKICYGDPKEIKKRGLYLKVRWRNYGPSEDTWEPIEGLSNCGEKIK 505
DDSE+FEV+ ++ +C+GDPK+ +K+G+Y K+ W+ YGP EDTWEP+ L +C + IK
Sbjct: 528 -ENDDSEVFEVDCVVGVCFGDPKKNEKKGIYFKIHWKGYGPEEDTWEPMNELEHCKKAIK 586
Query: 506 EFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDF 565
F+T G++ K LPLPGDVDV+CGGPPCQGVSGFNRFRN ++PLADEKN+QL V+MDIV +
Sbjct: 587 GFITEGYRLKKLPLPGDVDVVCGGPPCQGVSGFNRFRNTESPLADEKNQQLEVYMDIVRY 646
Query: 566 LKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWG 625
LKPKFVLMENVVDI+KFA G LGRYAL RL+ MNYQ RMGMMAAGAYGLPQFRMRVFLWG
Sbjct: 647 LKPKFVLMENVVDILKFADGFLGRYALGRLVDMNYQARMGMMAAGAYGLPQFRMRVFLWG 706
Query: 626 AQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPS 682
A+PTE LP Y LPTHDV+ RGVIPT+FE N VAYDEGQ+ +LA+ L L+DAISDLP+
Sbjct: 707 ARPTEILPQYPLPTHDVISRGVIPTQFEGNAVAYDEGQKTQLAKSLFLEDAISDLPA 763
>gi|357484051|ref|XP_003612312.1| DNA (cytosine-5)-methyltransferase [Medicago truncatula]
gi|355513647|gb|AES95270.1| DNA (cytosine-5)-methyltransferase [Medicago truncatula]
Length = 835
Score = 652 bits (1681), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/590 (55%), Positives = 419/590 (71%), Gaps = 27/590 (4%)
Query: 132 EARFLGDPVPDGEARQRWPKRYEVKKQKRRNQKDDDEEEIIQAKCHYMWAEVDGHITYDL 191
+A F+G+P+P EA+++WP RY + E+E ++AK HY A+VDG I Y L
Sbjct: 58 DACFVGEPIPADEAQKKWPHRYT-------KNDESSEDESLKAKFHYREAKVDG-ILYKL 109
Query: 192 FDDAHVKAESGEEDYICKIVEMFEAVDGTPYFTAQWYYRARDTVIESNAHLIDQRRVFFS 251
D+A+VK E G+EDYI IVEMFE + YFTAQW+YRA DTVI+ + +L+D++R+F S
Sbjct: 110 EDNAYVKGEEGKEDYIATIVEMFETPEEEQYFTAQWFYRAEDTVIKDHGNLVDKKRIFKS 169
Query: 252 EIQNDNPLECLVKKLNIARVPLNIDLEAKKLAIPHCDYYCDMMYLLPYSTFFSLPPENKR 311
+++++NPL+CLV+K+NI ++ + AKK IP CD+Y DM Y +PY TF ++ +
Sbjct: 170 DVKDENPLDCLVRKINIVQISPD---AAKKKKIPPCDFYFDMKYNVPYLTFSNIDNAHAI 226
Query: 312 V-----------SSETSSTISSDVDANECEVGEPQKMDVKLLDLYSGCGAMSTGLCLGAN 360
+ S +T V ++ E + + LLDLYSGCGAMSTGLC GA+
Sbjct: 227 IESETSTLSSESGSNVRATDKKGVKEKSTQIKESNRPEWTLLDLYSGCGAMSTGLCFGAS 286
Query: 361 LAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWEKLCISFSLIARKD 420
++G+ LVT+WAVDIN+YAC+SLKLNHPET VRNE EDFL+LL+EW KLC F L +
Sbjct: 287 ISGIKLVTKWAVDINKYACESLKLNHPETYVRNEPTEDFLSLLKEWAKLCDEFVLNGAES 346
Query: 421 PQQQLYSFNDDGESEEDDDNGNVEDESEDDSEIFEVEKILKICYGDPKEIKKRGLYLKVR 480
L N E+EE D+ ++D DSE+FEVE++L ICYGDP E +K GLY KV
Sbjct: 347 TDSDL---NAAEEAEEKADDEAMDDSP--DSEVFEVERLLSICYGDPNEDEKPGLYFKVH 401
Query: 481 WRNYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNR 540
W+ Y S DTWEPIEGLS C + +K+FV +G+K KILPLPG D ICGGPPCQGVSGFNR
Sbjct: 402 WKGYDSSYDTWEPIEGLSECKDAMKDFVINGYKEKILPLPGQADFICGGPPCQGVSGFNR 461
Query: 541 FRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNY 600
FRNK+ PL DEKNKQLIV+M+I+DFLKPK+VLMENVVDI+KFA G LGRYA+ RL+ MNY
Sbjct: 462 FRNKNAPLEDEKNKQLIVYMNIIDFLKPKYVLMENVVDILKFAGGFLGRYAVGRLVAMNY 521
Query: 601 QVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAYD 660
Q RMGMMAAG+YGLPQFRMRVFLWGA TEKLP Y LPTH VV R VIPTEFE TVAY
Sbjct: 522 QARMGMMAAGSYGLPQFRMRVFLWGALATEKLPSYPLPTHKVVSRSVIPTEFEEITVAYS 581
Query: 661 EGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQCFIRLRK 710
+ +LA+ L L+ AI+DLP V+N +S DE Y P T+FQ +IRL++
Sbjct: 582 TNENCQLAKALNLEGAINDLPPVENDDSDDERSYGTTPRTDFQKYIRLQR 631
>gi|359474666|ref|XP_002267685.2| PREDICTED: uncharacterized protein LOC100255190 [Vitis vinifera]
Length = 1789
Score = 645 bits (1665), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/680 (49%), Positives = 450/680 (66%), Gaps = 37/680 (5%)
Query: 47 TKRKTRSSVNDNTSLSSKKSKVEPEPEACVEKEGEVAEVICENSVAGSGSSSGVKVNKNR 106
T ++ S ND +S + S V E C+ + ++ +S+ G GSS V
Sbjct: 940 TSSQSSESGNDAKIVSFRTSDVTVMDEKCLRRSPRLS-----SSLVGPGSSKPVFSCSES 994
Query: 107 SSS--KKPIDSVKKLPVRGEHDDDDEPEARFLGDPVPDGEARQRWPKRYEVKKQKRRN-- 162
S S K+P + LP + + F+GDPVPD EA++RW RY++K +
Sbjct: 995 SDSFEKRPCKKIV-LPTSENRHGQYKRTSFFIGDPVPDKEAQERWHWRYDLKVEHNYFFF 1053
Query: 163 QKDDDEEEII-QAKCHYMWAEVDGHITYDLFDDAHVKAESGEEDYICKIVEMFEAVDGTP 221
DD+EEEI+ +CHY A++DG I ++L D AH+K E GE+ ++ +I+E F+ +G
Sbjct: 1054 SADDNEEEIVTNVECHYTQAKLDGTI-FNLGDCAHIKGE-GEQKHVGRILEFFKTTEGED 1111
Query: 222 YFTAQWYYRARDTVIESNAHLIDQRRVFFSEIQNDNPLECLVKKLNIA----RVPLNIDL 277
YF QW+YRA DTV++ A D++R+F S I NDN L+C++ K+N+ RV L +D
Sbjct: 1112 YFRVQWFYRAEDTVMKEEAASHDKKRIFCSTIMNDNSLDCIISKVNVLELTPRVSLKLD- 1170
Query: 278 EAKKLAIPHCDYYCDMMYLLPYSTFFSLPPENKRVSS---ETSSTISSDVDANECEVGEP 334
+IP DYY DM Y + YSTF +L + ++S ET ++++ + + +P
Sbjct: 1171 -----SIPPFDYYYDMKYNVEYSTFHTL--LSGKISPNCIETPLSVANTTFPEDMDGCKP 1223
Query: 335 QKMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNE 394
K ++ LLDLYSGCG MSTGLCLGA L+ +NLVT+WA+D ++ AC+SLKLNHPET+VRNE
Sbjct: 1224 DKAELALLDLYSGCGGMSTGLCLGAKLSCVNLVTKWALDFDKSACESLKLNHPETQVRNE 1283
Query: 395 SAEDFLTLLREWEKLC--ISFSLIARKDPQQQLYSFNDDGESEEDDDNGNVEDESEDDSE 452
+AEDFL LL+EWE LC + +L+ RK + D DE
Sbjct: 1284 TAEDFLDLLKEWEMLCEQYALNLVERKSQSRSNVLRTSKSNINSPHDIKVATDE------ 1337
Query: 453 IFEVEKILKICYGDPKEIKKRGLYLKVRWRNYGPSEDTWEPIEGLSNCGEKIKEFVTHGF 512
E+ K++ ICYGDP E KRGL KVRW+ YGPSEDTWEPIEGLSNC E I +FV +G
Sbjct: 1338 -LEILKLVDICYGDPSETGKRGLKFKVRWKGYGPSEDTWEPIEGLSNCQEGIYDFVRNGL 1396
Query: 513 KSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVL 572
KSKILP PGDVDVICGGPPCQG+SG+NRFRN D+PL+DE+N Q+++FMDIV FLKPK+VL
Sbjct: 1397 KSKILPRPGDVDVICGGPPCQGISGYNRFRNVDSPLSDERNHQIVIFMDIVKFLKPKYVL 1456
Query: 573 MENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKL 632
MENVVD++K K LGRYA++RL+ M YQ R+GM+AAG YGLPQFR+RVFLWGA P E L
Sbjct: 1457 MENVVDLLKLDKASLGRYAISRLVHMKYQARLGMIAAGCYGLPQFRLRVFLWGAHPGESL 1516
Query: 633 PPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEI 692
P + LPTHDVV + P+EFE N VAYDEGQ EL + ++L+DAISDLP+V NYE+RDE+
Sbjct: 1517 PQFPLPTHDVVAKYWPPSEFECNIVAYDEGQPRELEKAVVLRDAISDLPAVTNYETRDEM 1576
Query: 693 PYDREPETEFQCFIRLRKDG 712
Y + PETEFQ +IR KD
Sbjct: 1577 LYGKPPETEFQKYIRSTKDA 1596
>gi|358345790|ref|XP_003636958.1| DNA (cytosine-5)-methyltransferase [Medicago truncatula]
gi|355502893|gb|AES84096.1| DNA (cytosine-5)-methyltransferase [Medicago truncatula]
Length = 827
Score = 645 bits (1664), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/623 (53%), Positives = 435/623 (69%), Gaps = 35/623 (5%)
Query: 103 NKNRSSSKKPIDS--VKKLPVR---GEHDDDDEPEARFLGDPVPDGEARQRWPKRYEVKK 157
+K + + + P++ V LP R + + +A F+G+P+P EA+++WP RY
Sbjct: 20 SKRKKAKQSPVEEELVSLLPSRRKKSKQSSVNSDDACFVGEPIPADEAQKKWPHRY---- 75
Query: 158 QKRRNQKDDD--EEEIIQAKCHYMWAEVDGHITYDLFDDAHVKAESGEEDYICKIVEMFE 215
K+D+ E E ++AK HY A+VDG I Y L D+A+VK E G+EDYI +IVEMFE
Sbjct: 76 -----TKNDELSEGESLKAKFHYHEAKVDG-ILYKLEDNAYVKGEEGKEDYIARIVEMFE 129
Query: 216 AVDGTPYFTAQWYYRARDTVIESNAHLIDQRRVFFSEIQNDNPLECLVKKLNIARVPLNI 275
D YFTAQW+YRA DTVI+ + +L+D++R+F S+++++NPL+CLV+K+NI ++ +
Sbjct: 130 TPDEEQYFTAQWFYRAEDTVIKDHGNLVDKKRIFISDVKDENPLDCLVRKVNIVQISPD- 188
Query: 276 DLEAKKLAIPHCDYYCDMMYLLPYSTFFSLPPENKRVSSETSSTISSDVDANE------- 328
AKK IP C++Y DM Y +PY TF ++ N+ +S SS +V A +
Sbjct: 189 --AAKKKKIPPCEFYFDMKYTVPYLTFSNV--GNESETSTLSSESGYNVHAADKNAVKEK 244
Query: 329 -CEVGEPQKMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHP 387
++ E + + LLDLYSGCGAMSTGLC GA+++G+ LVTRWAVDIN++AC+SLKLNHP
Sbjct: 245 SSQIKECNRPEWTLLDLYSGCGAMSTGLCFGASISGIKLVTRWAVDINDHACESLKLNHP 304
Query: 388 ETEVRNESAEDFLTLLREWEKLCISFSLIARKDPQQQLYSFNDDGESEEDDDNGNVEDES 447
ET VRNE EDFL+LL+EW KLC F L + L + + GE + + N
Sbjct: 305 ETHVRNEPTEDFLSLLKEWAKLCEKFVLNGAESTDSDLNAGEEAGEEADGEATNN----- 359
Query: 448 EDDSEIFEVEKILKICYGDPKEIKKRGLYLKVRWRNYGPSEDTWEPIEGLSNCGEKIKEF 507
DSE+FEVE++L ICYGDP E +K GLY +V+W+ Y S DTWEPIEGLS C + +K+F
Sbjct: 360 SPDSEVFEVERLLSICYGDPNEDEKPGLYFRVQWKGYDSSYDTWEPIEGLSECKDAMKDF 419
Query: 508 VTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLK 567
V +G+K KILPLPG D ICGGPPCQGVSGFNRFRNK+ PL DEKNKQLIV+MDI++FLK
Sbjct: 420 VINGYKEKILPLPGQADFICGGPPCQGVSGFNRFRNKNAPLDDEKNKQLIVYMDIINFLK 479
Query: 568 PKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQ 627
PK+VLMENVVDI+KFA G LGRYA+ RL+ MNYQ RMGMMAAG+YGLPQFRMRVFLWGA
Sbjct: 480 PKYVLMENVVDILKFAGGFLGRYAVGRLVAMNYQARMGMMAAGSYGLPQFRMRVFLWGAL 539
Query: 628 PTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYE 687
TEKLP Y LPTH+V R VIP EFE TVAY ++ +LA+ L L D I DLP V+N
Sbjct: 540 TTEKLPSYPLPTHEVESRSVIPIEFEAITVAYSTNEKCQLAKALYLGDTIDDLPPVENDN 599
Query: 688 SRDEIPYDREPETEFQCFIRLRK 710
S DE Y P T+FQ +IRL++
Sbjct: 600 SDDEKSYGTTPRTDFQKYIRLKR 622
>gi|347952210|gb|AEP33250.1| CMT-type DNA-methyltransferase [Posidonia oceanica]
Length = 802
Score = 637 bits (1642), Expect = e-180, Method: Compositional matrix adjust.
Identities = 326/590 (55%), Positives = 413/590 (70%), Gaps = 30/590 (5%)
Query: 128 DDEPEARFLGDPVPDGEARQRWPKRYEVKKQKRRNQKDDD---EEEIIQAKCHYMWAEVD 184
D++ + RF+G P+PDGEAR+RWP RY KK ++ N + E E + AKCHY AEV+
Sbjct: 13 DEDHDCRFVGTPIPDGEARRRWPARYP-KKPRQGNSITNGAAFEYEDLLAKCHYERAEVE 71
Query: 185 GHITYDLFDDAHVKAESGEEDYICKIVEMFEAVDGTPYFTAQWYYRARDTVIESNAHLID 244
G + Y+L DD +VKAE+G+ DYI +IVE FEA+DG YFTAQW++R DT+I S D
Sbjct: 72 GFV-YNLHDDVYVKAETGKPDYIGRIVEFFEAIDGEYYFTAQWFFRVEDTIIGSVGDFHD 130
Query: 245 QRRVFFSEIQNDNPLECLVKKLNIA-RVPLNIDLEAKKLAIPHCDYYCDMMYLLPYSTFF 303
+ RVF S+ +NDN L+C+V K+ I R P +K IP CD Y +M Y +PYS+F
Sbjct: 131 RCRVFLSDEKNDNVLDCIVSKIKIVQRDP------EQKGPIPSCDLYYNMSYSVPYSSFT 184
Query: 304 SLPPENKRVSSETSSTISSD--VDANECEVGEPQKMDVKLLDLYSGCGAMSTGLCLGANL 361
+L + R SE SST+S + VD + E +K V LDLYSGCGAMSTGLC GA+L
Sbjct: 185 NLSKDKSRAGSEESSTVSFEDAVDTSNEETLSEKKTTV--LDLYSGCGAMSTGLCHGAHL 242
Query: 362 AGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWEKLCISFSLIARKDP 421
AGLN+ T WAVD+N+ AC+SL+LNH E +VRNE+AE FL LL+EWEKLC
Sbjct: 243 AGLNIETMWAVDMNKDACRSLQLNHSEAKVRNENAEHFLALLKEWEKLC----------- 291
Query: 422 QQQLYSFNDDGESEEDDDNGNVEDESEDDS-EIFEVEKILKICYGDPKEIKKRGLYLKVR 480
+ YS + D + EE N ED + DS E F VEK+L ICYGDP +I K G+ KVR
Sbjct: 292 --EKYSGSKDLDLEETMQEDNSEDNDDADSDEEFVVEKLLDICYGDPAKIGKDGIKFKVR 349
Query: 481 WRNYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNR 540
W+ YG EDTWEPIE L C E++ FV G K+ +LPLPGDVD +CGGPPCQG+SGFNR
Sbjct: 350 WKGYGSDEDTWEPIENLGKCEERMGNFVRWGMKTYLLPLPGDVDAVCGGPPCQGISGFNR 409
Query: 541 FRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNY 600
FRN DNPL DEKN+Q++ +MDIVD LKPK+VLMENVVDI+KF+KG LGRYAL+ L+ NY
Sbjct: 410 FRNSDNPLDDEKNRQMVTYMDIVDHLKPKYVLMENVVDILKFSKGFLGRYALSFLVSRNY 469
Query: 601 QVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAYD 660
Q R+G+MAAG YGLPQFR+R F WG+ P + LP + LPTHDVV + PTEFERN VAYD
Sbjct: 470 QARLGIMAAGCYGLPQFRLRAFFWGSDPYKMLPQFPLPTHDVVFKCGAPTEFERNVVAYD 529
Query: 661 EGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQCFIRLRK 710
E Q L + L+++DA+SDLPSV E+RD++ Y + P+TEFQ +IR K
Sbjct: 530 ENQPRVLEKALVIEDALSDLPSVTLLETRDQLSYGKAPQTEFQRYIRASK 579
>gi|297737359|emb|CBI26560.3| unnamed protein product [Vitis vinifera]
Length = 847
Score = 635 bits (1639), Expect = e-179, Method: Compositional matrix adjust.
Identities = 313/586 (53%), Positives = 419/586 (71%), Gaps = 27/586 (4%)
Query: 135 FLGDPVPDGEARQRWPKRYEVKKQKRRNQKDDDEEEII-QAKCHYMWAEVDGHITYDLFD 193
+GDPVPD EARQRWP RYE K +DD+E+E++ KCHY AE++ I ++L D
Sbjct: 74 LVGDPVPDEEARQRWPWRYEEK------VRDDEEDELVLDVKCHYSQAEIEKCI-FNLGD 126
Query: 194 DAHVKAESGEEDYICKIVEMFEAVDGTPYFTAQWYYRARDTVIESNAHLIDQRRVFFSEI 253
A+VKA G +YI +I+E F+ +D YF QW++R DTV+E +++R+F+S +
Sbjct: 127 CAYVKASKGGRNYIGRILEFFKTMDDEDYFRVQWFFRPEDTVMEEEGAFHEKKRLFYSNL 186
Query: 254 QNDNPLECLVKKLNIARVPLNIDLEAKKLAIPHCDYYCDMMYLLPYSTFFSLPPENK--R 311
NDN L+C+V K+NI ++ +++L++K +I CD+Y DM YL+ YSTF ++ +N R
Sbjct: 187 VNDNLLDCIVSKVNIIQITPSVNLKSK--SILPCDFYYDMKYLIDYSTFCTMEVDNSADR 244
Query: 312 VSSETSSTISS------DVDANECEVGEPQKMDVKLLDLYSGCGAMSTGLCLGANLAGLN 365
+ TS+ + + + N +P K ++ LLD+YSGCG MSTGLCLGA L+G++
Sbjct: 245 TNLSTSACLKTVHMNGIKPEFNRMSSHKPYKPELALLDIYSGCGGMSTGLCLGAKLSGVD 304
Query: 366 LVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWEKLCISFSLIARKDPQQQL 425
LVTRWA+DIN+ AC+SLKLNHPET++RNESAEDFL LL+EW+KLC + + KD Q+ L
Sbjct: 305 LVTRWALDINKSACESLKLNHPETQIRNESAEDFLDLLKEWDKLCKRYVV---KDVQESL 361
Query: 426 YSFNDDGESEE-DDDNGNVEDESEDDSEIFEVEKILKICYGDPKEIKKRGLYLKVRWRNY 484
+ + + + GN E FEV ++ ICYGDP K GL + RW +
Sbjct: 362 KVNSRVLRAAKVNSKTGNKSPSGE-----FEVASLIDICYGDPTNSGKHGLKFQARWAGH 416
Query: 485 GPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNK 544
GPSEDTWEPIEGLS C + I++FV GFK+KILP PGD DVICGGPPCQG+SG+NR RN
Sbjct: 417 GPSEDTWEPIEGLSKCQDLIQDFVLKGFKAKILPRPGDADVICGGPPCQGISGYNRHRNA 476
Query: 545 DNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRM 604
D+P DE+N+Q+IVFMDIV+FLKPK+VLMENVVDI++FAKG +GRYAL+RL++MNYQ R+
Sbjct: 477 DSPFDDERNRQIIVFMDIVNFLKPKYVLMENVVDILQFAKGSVGRYALSRLVRMNYQARL 536
Query: 605 GMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQ 664
G+MAAG YGLPQ+R+RVF WGA P E+LP +ALPTHDV+L+ PT FERN VAYDEGQ
Sbjct: 537 GIMAAGCYGLPQYRLRVFFWGAHPDERLPQFALPTHDVILKYGAPTAFERNIVAYDEGQS 596
Query: 665 AELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQCFIRLRK 710
+L + L+L DAI+DLP V N E+R+++ Y R PETEFQ +IR K
Sbjct: 597 PDLEKALVLGDAIADLPPVSNNETREQMSYRRPPETEFQKYIRATK 642
>gi|116062018|dbj|BAF34637.1| chromomethylase [Brassica rapa]
Length = 805
Score = 634 bits (1635), Expect = e-179, Method: Compositional matrix adjust.
Identities = 324/613 (52%), Positives = 420/613 (68%), Gaps = 43/613 (7%)
Query: 109 SKKPIDSVKKLPVRGEHDDDDEPEARFLGDPVPDGEARQRWPKRYEVKKQKR-------R 161
+ +PI S K V D +P + L +P+ D EAR WP+RY+V ++K +
Sbjct: 33 AAEPIRSRPKFKVELVVDSKKDP-SWVLDEPIADSEARTTWPERYQVIQKKEVVPLPKKK 91
Query: 162 NQKDDDEEEIIQAKCHYMWAEVDGHITYDLFDDAHVKAESGEEDYICKIVEMFEAVDGTP 221
+K +EEEI A+ H+ A +D ITY+L DDAHV++E E+ +ICKI E+FE DG
Sbjct: 92 KKKYVEEEEIFLARRHFRRAILDDSITYNLNDDAHVQSEEDEKPFICKIAEIFEGCDGKM 151
Query: 222 YFTAQWYYRARDTVIESNAHLIDQRRVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKK 281
YFTAQW+YRA DTVI+ + +ID +RVF S+I++ N + L+ KL I +PL + E +
Sbjct: 152 YFTAQWFYRACDTVIQKHEEMIDDKRVFISDIKDVNSMGVLLNKLKILMIPLTENTEVTE 211
Query: 282 LAIPHCDYYCDMMYLLPYSTFFSLPPENKRVSSETSSTISSDVDANECEVGEPQKMDVKL 341
CDYYC+M Y LP+ST +L ++S I+ + Q+ D +
Sbjct: 212 ----SCDYYCNMKYRLPFSTLEAL---------QSSQCITPN-----------QRTDATM 247
Query: 342 LDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLT 401
LDLY GCGAMSTGLC+GA L+GL LVT+WAVD EYA QS+K NHPET VRNESAEDFL
Sbjct: 248 LDLYCGCGAMSTGLCMGAQLSGLKLVTKWAVDTCEYAVQSIKYNHPETVVRNESAEDFLY 307
Query: 402 LLREWEKLCISFSLIARKDPQ--QQLYSFNDDGESEEDDDNGNVEDESEDDSEIFEVEKI 459
LL+EWEKLCI FSLI +D + + LY + + E+ +G+ E + +D E+FEVEKI
Sbjct: 308 LLKEWEKLCIHFSLIESEDSEKYENLYGMS----AAEEVKDGSDESDVKDGGEVFEVEKI 363
Query: 460 LKICYGDPKEIKKRGLYLKVRWRNYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPL 519
+ I K+ + L+LKVRW NYGPS DTWEPIE LSNC +KIKEFV HGFK+ ILPL
Sbjct: 364 VGI-----KKEEGGRLHLKVRWENYGPSHDTWEPIENLSNCRKKIKEFVVHGFKTSILPL 418
Query: 520 PGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDI 579
PG VDV+CGGPPCQG+SG+NRFRN+ PL D+KN+QL+ +M IV+FLKPK+VLMENVVD+
Sbjct: 419 PGGVDVVCGGPPCQGISGYNRFRNEKEPLKDKKNEQLLEYMKIVEFLKPKYVLMENVVDM 478
Query: 580 VKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPT 639
++F G L RYA+ RL+QMNYQ RMGMMAAG+YGL QFR R FLWGA +E LP + LPT
Sbjct: 479 LRFVDGFLARYAVGRLVQMNYQTRMGMMAAGSYGLAQFRRRFFLWGAMSSETLPQFPLPT 538
Query: 640 HDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPE 699
HD V RG +P F N VAY+E +LA K+LL D ++DLP V N E R E+PYD++P+
Sbjct: 539 HDAVNRGHVPVNFHSNVVAYEETDNVKLADKILLSDVLTDLPVVANNERRAEMPYDKDPK 598
Query: 700 TEFQCFIRLRKDG 712
T FQ FIRL ++G
Sbjct: 599 TPFQKFIRLTQEG 611
>gi|449456909|ref|XP_004146191.1| PREDICTED: DNA (cytosine-5)-methyltransferase CMT2-like [Cucumis
sativus]
gi|449512953|ref|XP_004164187.1| PREDICTED: DNA (cytosine-5)-methyltransferase CMT2-like [Cucumis
sativus]
Length = 1243
Score = 632 bits (1629), Expect = e-178, Method: Compositional matrix adjust.
Identities = 313/625 (50%), Positives = 419/625 (67%), Gaps = 28/625 (4%)
Query: 99 GVKVNKNRSSSKKPIDSVKKLPVRGEHDDD--------DEPEARFLGDPVPDGEARQRWP 150
G K ++ R SS + ++S P+ ++ + + F+GDPVP EA+QRW
Sbjct: 430 GTKASETRHSSSELLESGTGHPLEKTNNSSGADKKNNVSKMASFFVGDPVPADEAQQRWK 489
Query: 151 KRYEVKKQKRRNQK----DDDEEEII-QAKCHYMWAEVDGHITYDLFDDAHVKAESGEED 205
RYE+K Q + QK DDDE+ I+ CHY A + G+ + L D ++K E GE++
Sbjct: 490 WRYEMKNQITKEQKVTESDDDEDMIVVNVDCHYTQANI-GNTVFSLGDCVYIKGE-GEKN 547
Query: 206 YICKIVEMFEAVDGTPYFTAQWYYRARDTVIESNAHLIDQRRVFFSEIQNDNPLECLVKK 265
++ I+E F+ DG YF QW+YR DTVI+ D RR+F+S + NDNPL+C+V K
Sbjct: 548 HVGTIIEFFKTTDGDNYFRGQWFYRVEDTVIQEEGAFHDPRRLFYSTVMNDNPLDCIVSK 607
Query: 266 LNIARVPLNIDLEAKKLAIPHCDYYCDMMYLLPYSTFFSLPPENKRVSSETSSTISSDVD 325
+NI RV + K + D+Y DM Y + YSTF +L + + ++S +
Sbjct: 608 VNIKRVKPRVG--QKSNSASSYDFYYDMEYCVEYSTFRTLKNGESPTNCIDTPHVTSTSN 665
Query: 326 ANECEVGEPQKMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLN 385
E P+K +++LLDL+SGCG MSTGLCLGA L+ ++L++RWAVD + AC+SL+LN
Sbjct: 666 TFE---NMPKKAELELLDLFSGCGGMSTGLCLGAKLSSIDLISRWAVDSHMSACESLRLN 722
Query: 386 HPETEVRNESAEDFLTLLREWEKLCISFSLIARKDPQQQLYSFNDDGESEEDDDNGNVED 445
HPET VRNE+AEDFL LL+EWEKLC + + Q ND S +D+D
Sbjct: 723 HPETHVRNETAEDFLDLLKEWEKLCRRYKANESEGSHQLRSKANDYLTSSDDED------ 776
Query: 446 ESEDDSEIFEVEKILKICYGDPKEIKKRGLYLKVRWRNYGPSEDTWEPIEGLSNCGEKIK 505
E + FEV ++ ICYGDP KRGL VRW+ YGPSEDTWEPIEGLSNC E I+
Sbjct: 777 --EFPTSEFEVSSLVDICYGDPTRTGKRGLMFLVRWKGYGPSEDTWEPIEGLSNCQEAIQ 834
Query: 506 EFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDF 565
FV G KILPLPGDVDVICGGPPCQG+SG+NRFRN D P+ DE+N+Q+++FMDIV F
Sbjct: 835 NFVKRGLGEKILPLPGDVDVICGGPPCQGISGYNRFRNTDCPMDDERNRQIVIFMDIVKF 894
Query: 566 LKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWG 625
LKPK+VLMENV DI++F + LGRYA++RL+ MNYQ R+G +AAG +GLPQFR+RVFLWG
Sbjct: 895 LKPKYVLMENVTDILRFNQASLGRYAVSRLVHMNYQARLGTIAAGCFGLPQFRLRVFLWG 954
Query: 626 AQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDN 685
A+P+EKLP + LPTH+V++R P EFERNTVAYDE Q +L + ++LQDA+SDLP+V N
Sbjct: 955 ARPSEKLPQFPLPTHEVIVRYWPPPEFERNTVAYDENQPRQLEKAVVLQDALSDLPAVSN 1014
Query: 686 YESRDEIPYDREPETEFQCFIRLRK 710
ES +++PY++ PETEFQ +IR K
Sbjct: 1015 SESWEKMPYEKPPETEFQRYIRSSK 1039
>gi|218192371|gb|EEC74798.1| hypothetical protein OsI_10599 [Oryza sativa Indica Group]
Length = 1760
Score = 631 bits (1628), Expect = e-178, Method: Compositional matrix adjust.
Identities = 329/603 (54%), Positives = 410/603 (67%), Gaps = 33/603 (5%)
Query: 126 DDDDEPEARFLGDPVPDGEARQRWPKRYEVKKQKRRNQKDDDEEEIIQAKCHYMWAEVDG 185
D DD F+GDPVPD EARQRWP RY K +++ DE+E ++A+CHY+ A VD
Sbjct: 230 DSDDH----FVGDPVPDDEARQRWPVRYSRKGSDSLLKQEPDEDEEMKARCHYLAANVDD 285
Query: 186 HITYDLFDDAHVKAESGEEDYICKIVEMFEAVDGTPYFTAQWYYRARDTVIES-----NA 240
I Y L DD +VKA EE+YI +I E FE VD YF+ QW++R DTVI S +
Sbjct: 286 EI-YHLDDDVYVKAGPDEENYIGRITEFFEGVDRGSYFSCQWFFRTADTVISSKLLKVHD 344
Query: 241 HLIDQRRVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLAIPHCDYYCDMMYLLPYS 300
H + +RVF S+ +NDN +EC+V K+ IA V N+ +A+ AI CD Y DM Y + YS
Sbjct: 345 HRHNHKRVFLSKEKNDNLIECIVSKVKIAHVDPNMTPQARAHAISDCDLYYDMSYSVAYS 404
Query: 301 TFFSLPPEN-KRVSSETSSTISSDVDANECEVGE----------PQKMDVKLLDLYSGCG 349
TF +LP +N + SE +S IS D DA+ G+ Q LLDLYSGCG
Sbjct: 405 TFANLPADNDGALGSEATSNISCD-DADNSSKGKLSADIVSPYSEQTETASLLDLYSGCG 463
Query: 350 AMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWEKL 409
AMSTGLCLG +G+NL TRWAVDIN+YAC SLK NHP ++VRNE EDFL L+++W+ L
Sbjct: 464 AMSTGLCLGFAFSGINLETRWAVDINKYACASLKHNHPYSQVRNEKTEDFLALIQQWDAL 523
Query: 410 CISFSLIARKDPQQQLYSFNDDGESEEDDDNGNVEDESEDDSEIFEVEKILKICYGDPKE 469
C + + K+ L D ++ DD N E ED IF+VE++L+ICYGDP
Sbjct: 524 CRKY--VVHKN--NTLEPGIDMPLNDADDVN---EPLPED---IFDVEELLEICYGDPSN 573
Query: 470 IKKRGLYLKVRWRNYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDVDVICGG 529
K GL+ KVRW+ Y PS DTWEPI+GLS+C E+IKEFV G K ILPLPG VDVICGG
Sbjct: 574 TGKNGLWFKVRWKGYDPSYDTWEPIDGLSDCPERIKEFVEKGHKDNILPLPGAVDVICGG 633
Query: 530 PPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGR 589
PPCQG+SGFNRFR ++PL DEKNKQL+VFMDIV +L+PK+VLMENVVDI+KFA G LGR
Sbjct: 634 PPCQGISGFNRFRKHNDPLEDEKNKQLVVFMDIVKYLRPKYVLMENVVDILKFADGFLGR 693
Query: 590 YALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIP 649
YA++ L+ MNYQ R+GMMAAG YGLPQFRMR FLWGA P+ LP + LPTHD V+RG++P
Sbjct: 694 YAMSCLVAMNYQARLGMMAAGYYGLPQFRMRAFLWGALPSMVLPKFPLPTHDAVVRGIVP 753
Query: 650 TEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQCFIR-L 708
T F ++ VAY+E L + LLL DAISDLP V N + +D I Y P+TEFQ +IR
Sbjct: 754 TTFSQSVVAYNEVDTRCLRKALLLADAISDLPKVGNDQPKDVIEYSVAPKTEFQRYIRNN 813
Query: 709 RKD 711
RKD
Sbjct: 814 RKD 816
>gi|24421681|gb|AAN60988.1| Putative DNA cytosine methyltransferase MET2a [Oryza sativa
Japonica Group]
gi|108706955|gb|ABF94750.1| C-5 cytosine-specific DNA methylase family protein, expressed
[Oryza sativa Japonica Group]
Length = 1761
Score = 630 bits (1624), Expect = e-178, Method: Compositional matrix adjust.
Identities = 323/599 (53%), Positives = 405/599 (67%), Gaps = 34/599 (5%)
Query: 126 DDDDEPEARFLGDPVPDGEARQRWPKRYEVKKQKRRNQKDDDEEEIIQAKCHYMWAEVDG 185
D DD F+GDPVPD EARQRWP RY K +++ DE+E ++A+CHY+ A VD
Sbjct: 230 DSDDH----FVGDPVPDDEARQRWPVRYSRKGSDSLLKQEPDEDEEMKARCHYLAANVDD 285
Query: 186 HITYDLFDDAHVKAESGEEDYICKIVEMFEAVDGTPYFTAQWYYRARDTVIES-----NA 240
I Y L DD +VKA EE+YI +I E FE VD YF+ QW++R DTVI S +
Sbjct: 286 EI-YHLDDDVYVKAGPDEENYIGRITEFFEGVDRGSYFSCQWFFRTADTVISSKLLKVHD 344
Query: 241 HLIDQRRVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLAIPHCDYYCDMMYLLPYS 300
H + +RVF S+ +NDN +EC+V K+ IA V N+ +A+ AI CD Y DM Y + YS
Sbjct: 345 HRHNHKRVFLSKEKNDNLIECIVSKVKIAHVDPNMTPQARAHAISDCDLYYDMSYSVAYS 404
Query: 301 TFFSLPPEN-KRVSSETSSTISSDVDANECEVGE----------PQKMDVKLLDLYSGCG 349
TF +LP +N + SE +S IS D DA+ G+ Q LLDLYSGCG
Sbjct: 405 TFANLPADNDGALGSEATSNISCD-DADNSSKGKLSADIVAPYSEQTETASLLDLYSGCG 463
Query: 350 AMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWEKL 409
AMSTGLCLG +G+NL TRWAVDIN+YAC LK NHP ++VRNE EDFL L+++W+ L
Sbjct: 464 AMSTGLCLGFAFSGINLETRWAVDINKYACACLKHNHPYSQVRNEKTEDFLALIQQWDAL 523
Query: 410 CISFSLIARKDPQQQLYSFNDDGESEEDDDNGNVEDESEDDSE-IFEVEKILKICYGDPK 468
C ++ + ND E D + +D +E E IF+VE++L+ICYGDP
Sbjct: 524 C-----------RKYVVHKNDTLEPSIDMPLNDADDVNEPLPEDIFDVEELLEICYGDPS 572
Query: 469 EIKKRGLYLKVRWRNYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDVDVICG 528
K GL+ KVRW+ Y PS DTWEPI+GLS+C E+IKEFV G K ILPLPG VDVICG
Sbjct: 573 NTGKNGLWFKVRWKGYDPSYDTWEPIDGLSDCPERIKEFVEKGHKENILPLPGAVDVICG 632
Query: 529 GPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLG 588
GPPCQG+SGFNRFR ++PL DEKNKQL+VFMDIV +L+PK+VLMENVVDI+KFA G LG
Sbjct: 633 GPPCQGISGFNRFRKHNDPLEDEKNKQLVVFMDIVKYLRPKYVLMENVVDILKFADGFLG 692
Query: 589 RYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVI 648
RYA++ L+ MNYQ R+GMMAAG YGLPQFRMR FLWGA P+ LP + LPTHD V+RG++
Sbjct: 693 RYAMSCLVAMNYQARLGMMAAGYYGLPQFRMRAFLWGALPSMVLPKFPLPTHDAVVRGIV 752
Query: 649 PTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQCFIR 707
PT F ++ VAY+E L + LLL DAISDLP V N + +D I Y P+TEFQ +IR
Sbjct: 753 PTTFSQSVVAYNEVDTRCLRKALLLADAISDLPKVGNDQPKDVIEYSVAPKTEFQRYIR 811
>gi|242065598|ref|XP_002454088.1| hypothetical protein SORBIDRAFT_04g024430 [Sorghum bicolor]
gi|241933919|gb|EES07064.1| hypothetical protein SORBIDRAFT_04g024430 [Sorghum bicolor]
Length = 770
Score = 630 bits (1624), Expect = e-177, Method: Compositional matrix adjust.
Identities = 328/592 (55%), Positives = 405/592 (68%), Gaps = 34/592 (5%)
Query: 128 DDEPEARFLGDPVPDGEARQRWPKRYEVKKQKRRNQKDDDEEEIIQAKCHYMWAEVDGHI 187
D EPE F+G+ VP EAR WPKRYE + + ++DEE ++A+CHY A+VD ++
Sbjct: 139 DHEPE--FVGNAVPAVEARSNWPKRYE--RSTAATKPEEDEE--LKARCHYRSAKVD-NV 191
Query: 188 TYDLFDDAHVKAESGEEDYICKIVEMFEAVDGTPYFTAQWYYRARDTVIES------NAH 241
Y L DD +VKA E DYI +I E FE D YFT W++RA DTVI S + H
Sbjct: 192 VYCLGDDVYVKAGENEADYIGRITEFFEGTDRCHYFTCHWFFRAEDTVINSLVSINVDGH 251
Query: 242 LIDQRRVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLAIPHCDYYCDMMYLLPYST 301
+ D RRVF SE +NDN L+C++ K+ I RV NID +AK I HCD Y DM Y + YST
Sbjct: 252 MHDPRRVFLSEEKNDNVLDCIISKVKIVRVDPNIDPKAKAQLIEHCDLYYDMSYSVAYST 311
Query: 302 FFSLPPENKRVSSETSSTIS-SDVDANECEVGEPQKMDVKLLDLYSGCGAMSTGLCLGAN 360
F ++ EN + SET+S IS DVD E P++ LLDLYSGCG MSTGLCLGA
Sbjct: 312 FANISSENGQSGSETASGISDGDVDL-ETSSSMPERT-ATLLDLYSGCGGMSTGLCLGAA 369
Query: 361 LAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWEKLCISFSLIARKD 420
L+GL L TRWAVD+N +ACQSLK NHP+TEVRNE A++FL LL+EW LC + +D
Sbjct: 370 LSGLKLETRWAVDLNSFACQSLKYNHPQTEVRNEKADEFLALLKEWAVLCEKYV----QD 425
Query: 421 PQQQLYSFNDDGESEEDDDNGNVEDESEDDSEIFEVEKILKICYGDPKEIKKRGLYLKVR 480
L SE+ +D G+ D+ E F VEK++ ICYG +K G+Y KV+
Sbjct: 426 IDSNLAG------SEDQEDEGSPLDKDE-----FVVEKLIGICYGGSG--RKNGIYFKVQ 472
Query: 481 WRNYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNR 540
W YGP EDTWEPI+ LS+C KI+EFV G + KILPLPGDVDVICGGPPCQG+SGFNR
Sbjct: 473 WEGYGPEEDTWEPIDNLSDCPLKIREFVQEGHRRKILPLPGDVDVICGGPPCQGISGFNR 532
Query: 541 FRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNY 600
FRN+D PL DEKNKQ++ FMDIV +LKPK+VLMENVVDI+KFA G LG+YAL+ L+ M Y
Sbjct: 533 FRNRDEPLKDEKNKQMVTFMDIVAYLKPKYVLMENVVDILKFADGYLGKYALSCLVAMKY 592
Query: 601 QVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAYD 660
Q R+GMM AG YGLPQFRMRVFLWGA + LP Y LPT+DVV+RG P F + VAYD
Sbjct: 593 QARLGMMVAGCYGLPQFRMRVFLWGALSSMVLPKYPLPTYDVVVRGGAPNAFSQCIVAYD 652
Query: 661 EGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQCFIRL-RKD 711
E ++ L + LLL DAISDLP V+N++ D + Y P+TEFQ +IRL RKD
Sbjct: 653 ETEKPSLKKALLLGDAISDLPKVENHQPNDVMEYGGSPKTEFQRYIRLGRKD 704
>gi|222624499|gb|EEE58631.1| hypothetical protein OsJ_09996 [Oryza sativa Japonica Group]
Length = 1033
Score = 629 bits (1622), Expect = e-177, Method: Compositional matrix adjust.
Identities = 324/604 (53%), Positives = 406/604 (67%), Gaps = 34/604 (5%)
Query: 121 VRGEHDDDDEPEARFLGDPVPDGEARQRWPKRYEVKKQKRRNQKDDDEEEIIQAKCHYMW 180
R D DD F+GDPVPD EARQRWP RY K +++ DE+E ++A+CHY+
Sbjct: 225 ARRVEDSDDH----FVGDPVPDDEARQRWPVRYSRKGSDSLLKQEPDEDEEMKARCHYLA 280
Query: 181 AEVDGHITYDLFDDAHVKAESGEEDYICKIVEMFEAVDGTPYFTAQWYYRARDTVIES-- 238
A VD I Y L DD +VKA EE+YI +I E FE VD YF+ QW++R DTVI S
Sbjct: 281 ANVDDEI-YHLDDDVYVKAGPDEENYIGRITEFFEGVDRGSYFSCQWFFRTADTVISSKL 339
Query: 239 ---NAHLIDQRRVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLAIPHCDYYCDMMY 295
+ H + +RVF S+ +NDN +EC+V K+ IA V N+ +A+ AI CD Y DM Y
Sbjct: 340 LKVHDHRHNHKRVFLSKEKNDNLIECIVSKVKIAHVDPNMTPQARAHAISDCDLYYDMSY 399
Query: 296 LLPYSTFFSLPPENK-RVSSETSSTISSDVDANECEVGE----------PQKMDVKLLDL 344
+ YSTF +LP +N + SE +S IS D DA+ G+ Q LLDL
Sbjct: 400 SVAYSTFANLPADNDGALGSEATSNISCD-DADNSSKGKLSADIVAPYSEQTETASLLDL 458
Query: 345 YSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLR 404
YSGCGAMSTGLCLG +G+NL TRWAVDIN+YAC LK NHP ++VRNE EDFL L++
Sbjct: 459 YSGCGAMSTGLCLGFAFSGINLETRWAVDINKYACACLKHNHPYSQVRNEKTEDFLALIQ 518
Query: 405 EWEKLCISFSLIARKDPQQQLYSFNDDGESEEDDDNGNVEDESEDDSE-IFEVEKILKIC 463
+W+ LC ++ + ND E D + +D +E E IF+VE++L+IC
Sbjct: 519 QWDALC-----------RKYVVHKNDTLEPSIDMPLNDADDVNEPLPEDIFDVEELLEIC 567
Query: 464 YGDPKEIKKRGLYLKVRWRNYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDV 523
YGDP K GL+ KVRW+ Y PS DTWEPI+GLS+C E+IKEFV G K ILPLPG V
Sbjct: 568 YGDPSNTGKNGLWFKVRWKGYDPSYDTWEPIDGLSDCPERIKEFVEKGHKENILPLPGAV 627
Query: 524 DVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFA 583
DVICGGPPCQG+SGFNRFR ++PL DEKNKQL+VFMDIV +L+PK+VLMENVVDI+KFA
Sbjct: 628 DVICGGPPCQGISGFNRFRKHNDPLEDEKNKQLVVFMDIVKYLRPKYVLMENVVDILKFA 687
Query: 584 KGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVV 643
G LGRYA++ L+ MNYQ R+GMMAAG YGLPQFRMR FLWGA P+ LP + LPTHD V
Sbjct: 688 DGFLGRYAMSCLVAMNYQARLGMMAAGYYGLPQFRMRAFLWGALPSMVLPKFPLPTHDAV 747
Query: 644 LRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQ 703
+RG++PT F ++ VAY+E L + LLL DAISDLP V N + +D I Y P+TEFQ
Sbjct: 748 VRGIVPTTFSQSVVAYNEVDTRCLRKALLLADAISDLPKVGNDQPKDVIEYSVAPKTEFQ 807
Query: 704 CFIR 707
+IR
Sbjct: 808 RYIR 811
>gi|242077178|ref|XP_002448525.1| hypothetical protein SORBIDRAFT_06g028430 [Sorghum bicolor]
gi|241939708|gb|EES12853.1| hypothetical protein SORBIDRAFT_06g028430 [Sorghum bicolor]
Length = 913
Score = 627 bits (1617), Expect = e-177, Method: Compositional matrix adjust.
Identities = 325/591 (54%), Positives = 402/591 (68%), Gaps = 31/591 (5%)
Query: 128 DDEPEARFLGDPVPDGEARQRWPKRYEVKKQKRRNQKDDDEEEIIQAKCHYMWAEVDGHI 187
D EPE F+G+ VP EAR WPKRYE + K +E+E + AKCHY A+VD ++
Sbjct: 133 DHEPE--FVGNAVPAAEARSNWPKRYE----RSTAAKKPEEDEELNAKCHYRSAKVD-NV 185
Query: 188 TYDLFDDAHVKAESGEEDYICKIVEMFEAVDGTPYFTAQWYYRARDTVIES------NAH 241
Y L DD +VKA E DYI +I E FE D YFT +W++RA DTVI S + H
Sbjct: 186 VYCLGDDVYVKAGENEADYIGRITEFFEGTDRCHYFTCRWFFRAEDTVINSLVSINVDGH 245
Query: 242 LIDQRRVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLAIPHCDYYCDMMYLLPYST 301
D RRVF SE +NDN L+C++ K+ I V N+D +AK I HCD Y DM Y + YST
Sbjct: 246 KHDPRRVFLSEEKNDNVLDCIISKVKIVHVDPNMDPKAKAQLIEHCDLYYDMSYSVAYST 305
Query: 302 FFSLPPENKRVSSETSSTISSDVDANECEVGEPQKMDVKLLDLYSGCGAMSTGLCLGANL 361
F ++ EN + SET+S ISSD E P++ LLDLYSGCG MSTGLCLGA L
Sbjct: 306 FANISSENGQSGSETASGISSDDVDLEAPSSMPERT-ATLLDLYSGCGGMSTGLCLGAAL 364
Query: 362 AGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWEKLCISFSLIARKDP 421
+GL L TRWAVD+N +ACQSLK NHP+TEVRNE A++FL LL+EW LC + +D
Sbjct: 365 SGLKLETRWAVDLNSFACQSLKYNHPQTEVRNEKADEFLALLKEWAVLCEKY---VHQDV 421
Query: 422 QQQLYSFNDDGESEEDDDNGNVEDESEDDSEIFEVEKILKICYGDPKEIKKRGLYLKVRW 481
L SE+ +D G+ D+ E F VEK++ ICYG +K G+Y KV+W
Sbjct: 422 DSNLAG------SEDQEDEGSPLDKDE-----FVVEKLIGICYGGSG--RKDGIYFKVQW 468
Query: 482 RNYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRF 541
YGP EDTWEPI+ LS+C KI+EFV G + +ILPLPGDVDVICGGPPCQG+SGFNRF
Sbjct: 469 EGYGPEEDTWEPIDNLSDCPLKIREFVQEGHRRRILPLPGDVDVICGGPPCQGISGFNRF 528
Query: 542 RNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQ 601
RN+D PL DEKNKQ++ FMDIV +LKPK+VLMENVVDI+KFA G LG+YAL+ L+ M YQ
Sbjct: 529 RNRDEPLKDEKNKQMVTFMDIVAYLKPKYVLMENVVDILKFADGYLGKYALSCLVAMKYQ 588
Query: 602 VRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDE 661
R+GMM AG YGLPQFRMRVFLWGA + LP Y LPT+DVV+RG P F + VAYDE
Sbjct: 589 ARLGMMVAGCYGLPQFRMRVFLWGALSSMVLPKYPLPTYDVVVRGNTPNAFSQCMVAYDE 648
Query: 662 GQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQCFIRL-RKD 711
Q+ L + LLL DAISDLP V+N++ ++ + Y P+TEFQ +IRL RKD
Sbjct: 649 KQKPHLKKALLLGDAISDLPKVENHQPKEVMEYGGSPKTEFQRYIRLSRKD 699
>gi|218188370|gb|EEC70797.1| hypothetical protein OsI_02246 [Oryza sativa Indica Group]
Length = 907
Score = 622 bits (1604), Expect = e-175, Method: Compositional matrix adjust.
Identities = 327/609 (53%), Positives = 403/609 (66%), Gaps = 45/609 (7%)
Query: 120 PVRGEHDDDDEPEARFLGDPVPDGEARQRWPKRYEVKKQKRRNQKDDDEEEIIQAKCHYM 179
P R H D + + F+GDP P EAR +WP+RY+ RR DEEE I+A+CHY
Sbjct: 110 PSRVRHGSDGDHDPEFVGDPFPAKEARDKWPQRYQRNAATRR----PDEEEDIKARCHYS 165
Query: 180 WAEVDGHITYDLFDDAHVKAESGEEDYICKIVEMFEAVDGTPYFTAQWYYRARDTVIES- 238
A+VDG + Y L DD +VKAE + DYI +I E FE D YFT +W++RA DTVI S
Sbjct: 166 SAKVDGTL-YCLHDDVYVKAEEDKADYIGRITEFFEGTDHCRYFTCRWFFRAEDTVISSI 224
Query: 239 ---NA--HLIDQRRVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLAIPHCDYYCDM 293
NA D +RVF SE +NDN L+C++ K+ I + N++ EAK + CD Y DM
Sbjct: 225 MMENADDEKHDLKRVFLSEEKNDNVLDCIISKVKIVHIDPNMESEAKARRLADCDLYYDM 284
Query: 294 MYLLPYSTFFSLPPENKRVSSETS------------STISSDVDANECEVGEPQKMDVKL 341
Y + YSTF ++P EN S+T+ + SD +A+ VG+ L
Sbjct: 285 SYTVAYSTFANIPLENGASGSDTASDISSDDVDSSKGKVVSDSEASS--VGK-----ATL 337
Query: 342 LDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLT 401
LDLYSGCG MSTGLCLGA LAGLNL TRWAVD N +AC+SLK NHP TEVRNE A++FL
Sbjct: 338 LDLYSGCGGMSTGLCLGAALAGLNLETRWAVDFNSFACESLKYNHPRTEVRNEKADEFLA 397
Query: 402 LLREWEKLCISFSLIARKDPQQQLYSFNDDGESEEDDDNGNVEDESEDDSEIFEVEKILK 461
LL+ W LC + +KD +S E+EEDDD +DE F VEK+
Sbjct: 398 LLKGWHSLCDEY---VKKDID---FSSAGASENEEDDDEPLEKDE-------FVVEKLAG 444
Query: 462 ICYGDPKEIKKRGLYLKVRWRNYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPG 521
ICYG ++ GLY KV+W+ YG EDTWEPIE L +C KIKEFV G++ KILPLPG
Sbjct: 445 ICYGGSG--REDGLYFKVQWKGYGREEDTWEPIENLRDCPLKIKEFVQEGYRRKILPLPG 502
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
DVDVICGGPPCQG+SGFNRFRN+ PL DEKNKQ++ FMDIV +LKPK+VLMENVVDI+K
Sbjct: 503 DVDVICGGPPCQGISGFNRFRNRKEPLKDEKNKQMVTFMDIVAYLKPKYVLMENVVDILK 562
Query: 582 FAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHD 641
FA G LGRYAL+RL+ M YQ R+GMM AG YGLPQFRMRVFLWGA PT LP Y LPTH+
Sbjct: 563 FADGYLGRYALSRLVAMKYQARLGMMVAGCYGLPQFRMRVFLWGALPTMVLPKYPLPTHN 622
Query: 642 VVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETE 701
VV+RG P F ++ VAYDE Q+ L LLL DAISDLP V+N++ + + Y P+TE
Sbjct: 623 VVVRGGAPNAFSQSIVAYDETQKPTLKNALLLGDAISDLPEVNNHQPNEVMEYGSSPKTE 682
Query: 702 FQCFIRLRK 710
FQ +IRL +
Sbjct: 683 FQRYIRLSR 691
>gi|226088548|dbj|BAH37019.1| chromomethylase OsMET2a [Oryza sativa Japonica Group]
Length = 907
Score = 621 bits (1602), Expect = e-175, Method: Compositional matrix adjust.
Identities = 327/609 (53%), Positives = 403/609 (66%), Gaps = 45/609 (7%)
Query: 120 PVRGEHDDDDEPEARFLGDPVPDGEARQRWPKRYEVKKQKRRNQKDDDEEEIIQAKCHYM 179
P R H D + + F+GDP P EAR +WP+RY+ RR DEEE I+A+CHY
Sbjct: 110 PSRVRHGSDGDHDPEFVGDPFPAKEARDKWPQRYQRNAATRR----PDEEEDIKARCHYS 165
Query: 180 WAEVDGHITYDLFDDAHVKAESGEEDYICKIVEMFEAVDGTPYFTAQWYYRARDTVIES- 238
A+VDG + Y L DD +VKAE + DYI +I E FE D YFT +W++RA DTVI S
Sbjct: 166 SAKVDGTL-YCLHDDVYVKAEEDKADYIGRITEFFEGTDHCHYFTCRWFFRAEDTVISSI 224
Query: 239 ---NA--HLIDQRRVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLAIPHCDYYCDM 293
NA D +RVF SE +NDN L+C++ K+ I + N++ EAK + CD Y DM
Sbjct: 225 MMENADDEKHDLKRVFLSEEKNDNVLDCIISKVKIVYIDPNMESEAKARRLADCDLYYDM 284
Query: 294 MYLLPYSTFFSLPPENKRVSSETS------------STISSDVDANECEVGEPQKMDVKL 341
Y + YSTF ++P EN S+T+ + SD +A+ VG+ L
Sbjct: 285 SYTVAYSTFANIPLENGASGSDTASDISSDDVDSSKGKVVSDSEASS--VGK-----ATL 337
Query: 342 LDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLT 401
LDLYSGCG MSTGLCLGA LAGLNL TRWAVD N +AC+SLK NHP TEVRNE A++FL
Sbjct: 338 LDLYSGCGGMSTGLCLGAALAGLNLETRWAVDFNSFACESLKYNHPRTEVRNEKADEFLA 397
Query: 402 LLREWEKLCISFSLIARKDPQQQLYSFNDDGESEEDDDNGNVEDESEDDSEIFEVEKILK 461
LL+ W LC + +KD +S E+EEDDD +DE F VEK+
Sbjct: 398 LLKGWHSLCDEY---VKKDID---FSSAGASENEEDDDEPLEKDE-------FVVEKLAG 444
Query: 462 ICYGDPKEIKKRGLYLKVRWRNYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPG 521
ICYG ++ GLY KV+W+ YG EDTWEPIE L +C KIKEFV G++ KILPLPG
Sbjct: 445 ICYGGSG--REDGLYFKVQWKGYGREEDTWEPIENLRDCPLKIKEFVQEGYRRKILPLPG 502
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
DVDVICGGPPCQG+SGFNRFRN+ PL DEKNKQ++ FMDIV +LKPK+VLMENVVDI+K
Sbjct: 503 DVDVICGGPPCQGISGFNRFRNRKEPLKDEKNKQMVTFMDIVAYLKPKYVLMENVVDILK 562
Query: 582 FAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHD 641
FA G LGRYAL+RL+ M YQ R+GMM AG YGLPQFRMRVFLWGA PT LP Y LPTH+
Sbjct: 563 FADGYLGRYALSRLVAMKYQARLGMMVAGCYGLPQFRMRVFLWGALPTMVLPKYPLPTHN 622
Query: 642 VVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETE 701
VV+RG P F ++ VAYDE Q+ L LLL DAISDLP V+N++ + + Y P+TE
Sbjct: 623 VVVRGGAPNAFSQSIVAYDETQKPTLKNALLLGDAISDLPEVNNHQPNEVMEYGSSPKTE 682
Query: 702 FQCFIRLRK 710
FQ +IRL +
Sbjct: 683 FQRYIRLSR 691
>gi|222612319|gb|EEE50451.1| hypothetical protein OsJ_30466 [Oryza sativa Japonica Group]
Length = 907
Score = 621 bits (1602), Expect = e-175, Method: Compositional matrix adjust.
Identities = 327/609 (53%), Positives = 403/609 (66%), Gaps = 45/609 (7%)
Query: 120 PVRGEHDDDDEPEARFLGDPVPDGEARQRWPKRYEVKKQKRRNQKDDDEEEIIQAKCHYM 179
P R H D + + F+GDP P EAR +WP+RY+ RR DEEE I+A+CHY
Sbjct: 110 PSRVRHGSDGDHDPEFVGDPFPAKEARDKWPQRYQRNAATRR----PDEEEDIKARCHYS 165
Query: 180 WAEVDGHITYDLFDDAHVKAESGEEDYICKIVEMFEAVDGTPYFTAQWYYRARDTVIES- 238
A+VDG + Y L DD +VKAE + DYI +I E FE D YFT +W++RA DTVI S
Sbjct: 166 SAKVDGTL-YCLHDDVYVKAEEDKADYIGRITEFFEGTDHCHYFTCRWFFRAEDTVISSI 224
Query: 239 ---NA--HLIDQRRVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLAIPHCDYYCDM 293
NA D +RVF SE +NDN L+C++ K+ I + N++ EAK + CD Y DM
Sbjct: 225 MMENADDEKHDLKRVFLSEEKNDNVLDCIISKVKIVYIDPNMESEAKARRLADCDLYYDM 284
Query: 294 MYLLPYSTFFSLPPENKRVSSETS------------STISSDVDANECEVGEPQKMDVKL 341
Y + YSTF ++P EN S+T+ + SD +A+ VG+ L
Sbjct: 285 SYTVAYSTFANIPLENGASGSDTASDISSDDVDSSKGKVVSDSEASS--VGK-----ATL 337
Query: 342 LDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLT 401
LDLYSGCG MSTGLCLGA LAGLNL TRWAVD N +AC+SLK NHP TEVRNE A++FL
Sbjct: 338 LDLYSGCGGMSTGLCLGAALAGLNLETRWAVDFNSFACESLKYNHPRTEVRNEKADEFLA 397
Query: 402 LLREWEKLCISFSLIARKDPQQQLYSFNDDGESEEDDDNGNVEDESEDDSEIFEVEKILK 461
LL+ W LC + +KD +S E+EEDDD +DE F VEK+
Sbjct: 398 LLKGWHSLCDEY---VKKDID---FSSAGASENEEDDDEPLEKDE-------FVVEKLAG 444
Query: 462 ICYGDPKEIKKRGLYLKVRWRNYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPG 521
ICYG ++ GLY KV+W+ YG EDTWEPIE L +C KIKEFV G++ KILPLPG
Sbjct: 445 ICYGGSG--REDGLYFKVQWKGYGREEDTWEPIENLRDCPLKIKEFVQEGYRRKILPLPG 502
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
DVDVICGGPPCQG+SGFNRFRN+ PL DEKNKQ++ FMDIV +LKPK+VLMENVVDI+K
Sbjct: 503 DVDVICGGPPCQGISGFNRFRNRKEPLKDEKNKQMVTFMDIVAYLKPKYVLMENVVDILK 562
Query: 582 FAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHD 641
FA G LGRYAL+RL+ M YQ R+GMM AG YGLPQFRMRVFLWGA PT LP Y LPTH+
Sbjct: 563 FADGYLGRYALSRLVAMKYQARLGMMVAGCYGLPQFRMRVFLWGALPTMVLPKYPLPTHN 622
Query: 642 VVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETE 701
VV+RG P F ++ VAYDE Q+ L LLL DAISDLP V+N++ + + Y P+TE
Sbjct: 623 VVVRGGAPNAFSQSIVAYDETQKPTLKNALLLGDAISDLPEVNNHQPNEVMEYGSSPKTE 682
Query: 702 FQCFIRLRK 710
FQ +IRL +
Sbjct: 683 FQRYIRLSR 691
>gi|162463785|ref|NP_001104978.1| DNA (cytosine-5)-methyltransferase 1 [Zea mays]
gi|75168496|sp|Q9AXT8.1|CMT1_MAIZE RecName: Full=DNA (cytosine-5)-methyltransferase 1; AltName:
Full=Chromomethylase 1; AltName: Full=DNA cytosine
methyltransferase MET2a; AltName: Full=Zea
methyltransferase2; Short=Zmet2
gi|13021690|gb|AAK11516.1|AF243043_1 DNA cytosine methyltransferase MET2a [Zea mays]
gi|260749135|gb|ACX48824.1| chromomethylase [Zea mays]
Length = 912
Score = 620 bits (1598), Expect = e-174, Method: Compositional matrix adjust.
Identities = 321/595 (53%), Positives = 397/595 (66%), Gaps = 40/595 (6%)
Query: 128 DDEPEARFLGDPVPDGEARQRWPKRYEVKKQKRRNQKDDDEEEIIQAKCHYMWAEVDGHI 187
D EPE F+G PV EAR WPKRY + K DEEE ++A+CHY A+VD ++
Sbjct: 132 DHEPE--FIGSPVAADEARSNWPKRY----GRSTAAKKPDEEEELKARCHYRSAKVD-NV 184
Query: 188 TYDLFDDAHVKAESGEEDYICKIVEMFEAVDGTPYFTAQWYYRARDTVIES------NAH 241
Y L DD +VKA E DYI +I E FE D YFT +W++RA DTVI S + H
Sbjct: 185 VYCLGDDVYVKAGENEADYIGRITEFFEGTDQCHYFTCRWFFRAEDTVINSLVSISVDGH 244
Query: 242 LIDQRRVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLAIPHCDYYCDMMYLLPYST 301
D RRVF SE +NDN L+C++ K+ I V N+D +AK I CD Y DM Y + YST
Sbjct: 245 KHDPRRVFLSEEKNDNVLDCIISKVKIVHVDPNMDPKAKAQLIESCDLYYDMSYSVAYST 304
Query: 302 FFSLPPENKRVSSETSSTISSDVDANECEVGEPQKMDVKLLDLYSGCGAMSTGLCLGANL 361
F ++ EN + S+T+S ISSD E P + LLDLYSGCG MSTGLCLGA L
Sbjct: 305 FANISSENGQSGSDTASGISSDDVDLETSSSMPTRT-ATLLDLYSGCGGMSTGLCLGAAL 363
Query: 362 AGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWEKLCISFSLIARKDP 421
+GL L TRWAVD N +ACQSLK NHP+TEVRNE A++FL LL+EW LC +
Sbjct: 364 SGLKLETRWAVDFNSFACQSLKYNHPQTEVRNEKADEFLALLKEWAVLCKKYV------- 416
Query: 422 QQQLYSFNDDGESEEDDDNGNVEDESEDDSEI----FEVEKILKICYGDPKEIKKRGLYL 477
+ D + + ED++++DS + F VEK++ ICYG ++ G+Y
Sbjct: 417 ------------QDVDSNLASSEDQADEDSPLDKDEFVVEKLVGICYGGSD--RENGIYF 462
Query: 478 KVRWRNYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSG 537
KV+W YGP EDTWEPI+ LS+C +KI+EFV G K KILPLPGDVDVICGGPPCQG+SG
Sbjct: 463 KVQWEGYGPEEDTWEPIDNLSDCPQKIREFVQEGHKRKILPLPGDVDVICGGPPCQGISG 522
Query: 538 FNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQ 597
FNR+RN+D PL DEKNKQ++ FMDIV +LKPK+VLMENVVDI+KFA G LG+YAL+ L+
Sbjct: 523 FNRYRNRDEPLKDEKNKQMVTFMDIVAYLKPKYVLMENVVDILKFADGYLGKYALSCLVA 582
Query: 598 MNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNTV 657
M YQ R+GMM AG YGLPQFRMRVFLWGA + LP Y LPT+DVV+RG P F + V
Sbjct: 583 MKYQARLGMMVAGCYGLPQFRMRVFLWGALSSMVLPKYPLPTYDVVVRGGAPNAFSQCMV 642
Query: 658 AYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQCFIRL-RKD 711
AYDE Q+ L + LLL DAISDLP V N++ D + Y P+TEFQ +IRL RKD
Sbjct: 643 AYDETQKPSLKKALLLGDAISDLPKVQNHQPNDVMEYGGSPKTEFQRYIRLSRKD 697
>gi|413919506|gb|AFW59438.1| DNA (cytosine-5)-methyltransferase 1 [Zea mays]
Length = 915
Score = 619 bits (1596), Expect = e-174, Method: Compositional matrix adjust.
Identities = 320/595 (53%), Positives = 397/595 (66%), Gaps = 40/595 (6%)
Query: 128 DDEPEARFLGDPVPDGEARQRWPKRYEVKKQKRRNQKDDDEEEIIQAKCHYMWAEVDGHI 187
D EPE F+G PV EAR WPKRY + K DEEE ++A+CHY A+VD ++
Sbjct: 135 DHEPE--FIGSPVAADEARSNWPKRY----GRSTAAKKPDEEEELKARCHYRSAKVD-NV 187
Query: 188 TYDLFDDAHVKAESGEEDYICKIVEMFEAVDGTPYFTAQWYYRARDTVIES------NAH 241
Y L DD +VKA E DYI +I E FE D YFT +W++RA DTVI S + H
Sbjct: 188 VYCLGDDVYVKAGENEADYIGRITEFFEGTDQCHYFTCRWFFRAEDTVINSLVSISVDGH 247
Query: 242 LIDQRRVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLAIPHCDYYCDMMYLLPYST 301
D RRVF SE +NDN L+C++ K+ I V N+D +AK I CD Y DM Y + YST
Sbjct: 248 KHDPRRVFLSEEKNDNVLDCIISKVKIVHVDPNMDPKAKAQLIESCDLYYDMSYSVAYST 307
Query: 302 FFSLPPENKRVSSETSSTISSDVDANECEVGEPQKMDVKLLDLYSGCGAMSTGLCLGANL 361
F ++ EN + S+T+S ISSD E P + LLDLYSGCG MSTGLCLGA L
Sbjct: 308 FANISSENGQSDSDTASGISSDDVDLETSSSMPTRT-ATLLDLYSGCGGMSTGLCLGAAL 366
Query: 362 AGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWEKLCISFSLIARKDP 421
+GL L TRWAVD N +ACQSLK NHP+TEVRNE A++FL LL+EW LC +
Sbjct: 367 SGLKLETRWAVDFNSFACQSLKYNHPQTEVRNEKADEFLALLKEWAVLCKKYV------- 419
Query: 422 QQQLYSFNDDGESEEDDDNGNVEDESEDDSEI----FEVEKILKICYGDPKEIKKRGLYL 477
+ D + + ED++++DS + F VEK++ ICYG ++ G+Y
Sbjct: 420 ------------QDVDSNLASSEDQADEDSPLDKDEFVVEKLVGICYGGSD--RENGIYF 465
Query: 478 KVRWRNYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSG 537
KV+W YGP EDTWEPI+ LS+C +KI++FV G K KILPLPGDVDVICGGPPCQG+SG
Sbjct: 466 KVQWEGYGPEEDTWEPIDNLSDCPQKIRDFVQEGHKRKILPLPGDVDVICGGPPCQGISG 525
Query: 538 FNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQ 597
FNR+RN+D PL DEKNKQ++ FMDIV +LKPK+VLMENVVDI+KFA G LG+YAL+ L+
Sbjct: 526 FNRYRNRDEPLKDEKNKQMVTFMDIVAYLKPKYVLMENVVDILKFADGYLGKYALSCLVA 585
Query: 598 MNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNTV 657
M YQ R+GMM AG YGLPQFRMRVFLWGA + LP Y LPT+DVV+RG P F + V
Sbjct: 586 MKYQARLGMMVAGCYGLPQFRMRVFLWGALSSMVLPKYPLPTYDVVVRGGAPNAFSQCMV 645
Query: 658 AYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQCFIRL-RKD 711
AYDE Q+ L + LLL DAISDLP V N++ D + Y P+TEFQ +IRL RKD
Sbjct: 646 AYDETQKPSLKKALLLGDAISDLPKVQNHQPNDVMEYGGSPKTEFQRYIRLSRKD 700
>gi|409107274|pdb|4FT2|A Chain A, Crystal Structure Of Zea Mays Zmet2 In Complex
H3(1-15)k9me2 Peptide And Sah
gi|409107275|pdb|4FT2|B Chain B, Crystal Structure Of Zea Mays Zmet2 In Complex
H3(1-15)k9me2 Peptide And Sah
gi|409107277|pdb|4FT4|B Chain B, Crystal Structure Of Zea Mays Zmet2 In Complex
H3(1-32)k9me2 Peptide And Sah
gi|409107278|pdb|4FT4|A Chain A, Crystal Structure Of Zea Mays Zmet2 In Complex
H3(1-32)k9me2 Peptide And Sah
Length = 784
Score = 618 bits (1594), Expect = e-174, Method: Compositional matrix adjust.
Identities = 321/595 (53%), Positives = 397/595 (66%), Gaps = 40/595 (6%)
Query: 128 DDEPEARFLGDPVPDGEARQRWPKRYEVKKQKRRNQKDDDEEEIIQAKCHYMWAEVDGHI 187
D EPE F+G PV EAR WPKRY + K DEEE ++A+CHY A+VD ++
Sbjct: 4 DHEPE--FIGSPVAADEARSNWPKRY----GRSTAAKKPDEEEELKARCHYRSAKVD-NV 56
Query: 188 TYDLFDDAHVKAESGEEDYICKIVEMFEAVDGTPYFTAQWYYRARDTVIES------NAH 241
Y L DD +VKA E DYI +I E FE D YFT +W++RA DTVI S + H
Sbjct: 57 VYCLGDDVYVKAGENEADYIGRITEFFEGTDQCHYFTCRWFFRAEDTVINSLVSISVDGH 116
Query: 242 LIDQRRVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLAIPHCDYYCDMMYLLPYST 301
D RRVF SE +NDN L+C++ K+ I V N+D +AK I CD Y DM Y + YST
Sbjct: 117 KHDPRRVFLSEEKNDNVLDCIISKVKIVHVDPNMDPKAKAQLIESCDLYYDMSYSVAYST 176
Query: 302 FFSLPPENKRVSSETSSTISSDVDANECEVGEPQKMDVKLLDLYSGCGAMSTGLCLGANL 361
F ++ EN + S+T+S ISSD E P + LLDLYSGCG MSTGLCLGA L
Sbjct: 177 FANISSENGQSGSDTASGISSDDVDLETSSSMPTRT-ATLLDLYSGCGGMSTGLCLGAAL 235
Query: 362 AGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWEKLCISFSLIARKDP 421
+GL L TRWAVD N +ACQSLK NHP+TEVRNE A++FL LL+EW LC +
Sbjct: 236 SGLKLETRWAVDFNSFACQSLKYNHPQTEVRNEKADEFLALLKEWAVLCKKYV------- 288
Query: 422 QQQLYSFNDDGESEEDDDNGNVEDESEDDSEI----FEVEKILKICYGDPKEIKKRGLYL 477
+ D + + ED++++DS + F VEK++ ICYG ++ G+Y
Sbjct: 289 ------------QDVDSNLASSEDQADEDSPLDKDEFVVEKLVGICYGGSD--RENGIYF 334
Query: 478 KVRWRNYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSG 537
KV+W YGP EDTWEPI+ LS+C +KI+EFV G K KILPLPGDVDVICGGPPCQG+SG
Sbjct: 335 KVQWEGYGPEEDTWEPIDNLSDCPQKIREFVQEGHKRKILPLPGDVDVICGGPPCQGISG 394
Query: 538 FNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQ 597
FNR+RN+D PL DEKNKQ++ FMDIV +LKPK+VLMENVVDI+KFA G LG+YAL+ L+
Sbjct: 395 FNRYRNRDEPLKDEKNKQMVTFMDIVAYLKPKYVLMENVVDILKFADGYLGKYALSCLVA 454
Query: 598 MNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNTV 657
M YQ R+GMM AG YGLPQFRMRVFLWGA + LP Y LPT+DVV+RG P F + V
Sbjct: 455 MKYQARLGMMVAGCYGLPQFRMRVFLWGALSSMVLPKYPLPTYDVVVRGGAPNAFSQCMV 514
Query: 658 AYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQCFIRL-RKD 711
AYDE Q+ L + LLL DAISDLP V N++ D + Y P+TEFQ +IRL RKD
Sbjct: 515 AYDETQKPSLKKALLLGDAISDLPKVQNHQPNDVMEYGGSPKTEFQRYIRLSRKD 569
>gi|75157426|sp|Q8LPU5.1|CMT3_MAIZE RecName: Full=DNA (cytosine-5)-methyltransferase 3; AltName:
Full=Chromomethylase 3; AltName: Full=DNA
methyltransferase 105
gi|20977600|gb|AAM28227.1| DNA methyltransferase 105 [Zea mays]
gi|414585461|tpg|DAA36032.1| TPA: DNA (cytosine-5)-methyltransferase 2 [Zea mays]
Length = 915
Score = 617 bits (1591), Expect = e-174, Method: Compositional matrix adjust.
Identities = 319/591 (53%), Positives = 395/591 (66%), Gaps = 32/591 (5%)
Query: 128 DDEPEARFLGDPVPDGEARQRWPKRYEVKKQKRRNQKDDDEEEIIQAKCHYMWAEVDGHI 187
D PE F+G PV EA WPKRYE + ++DD+ ++A+CHY A+VD +I
Sbjct: 136 DHVPE--FIGSPVAAAEAHSNWPKRYERSTAANKPEEDDE----LKARCHYRSAKVD-NI 188
Query: 188 TYDLFDDAHVKAESGEEDYICKIVEMFEAVDGTPYFTAQWYYRARDTVIES------NAH 241
Y L DD +VKA E DYI +I E FE D YFT +W++RA DTVI S + H
Sbjct: 189 VYCLGDDVYVKAGENEADYIGRITEFFEGTDRCHYFTCRWFFRAEDTVINSLVSINVDGH 248
Query: 242 LIDQRRVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLAIPHCDYYCDMMYLLPYST 301
D RRVF SE +NDN L+C++ K+ I V N+D +AK I HCD Y DM Y + YST
Sbjct: 249 KHDPRRVFLSEEKNDNVLDCIISKVKIVHVDPNMDPKAKAQLIEHCDLYYDMSYSVAYST 308
Query: 302 FFSLPPENKRVSSETSSTISSDVDANECEVGEPQKMDVKLLDLYSGCGAMSTGLCLGANL 361
F ++ EN + SET+S ISSD E P++ LLDLYSGCG MSTGLCLGA L
Sbjct: 309 FANISSENGQSGSETASGISSDDAGLETSSNMPERT-ATLLDLYSGCGGMSTGLCLGAAL 367
Query: 362 AGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWEKLCISFSLIARKDP 421
+GL L TRWAVD+N +ACQSLK NHP+TEVRNE A++FL LL+EW LC + +D
Sbjct: 368 SGLKLETRWAVDLNSFACQSLKYNHPQTEVRNEKADEFLALLKEWAVLCEKY---VHQDV 424
Query: 422 QQQLYSFNDDGESEEDDDNGNVEDESEDDSEIFEVEKILKICYGDPKEIKKRGLYLKVRW 481
L ED ++ + D+ E F V+K++ I Y +K+G+Y KV+W
Sbjct: 425 DSNL-------AGSEDQEDADTLDKDE-----FVVQKLIGIRYDGTG--RKKGVYFKVQW 470
Query: 482 RNYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRF 541
YGP EDTWEPI+ LS+C KI+EFV G K KILPLPGDVDVICGGPPCQG+SGFNRF
Sbjct: 471 EGYGPEEDTWEPIDNLSDCPLKIREFVQEGRKRKILPLPGDVDVICGGPPCQGISGFNRF 530
Query: 542 RNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQ 601
RN+D PL DEKNKQ++ FMDIV +LKPK+VLMENVVDI+KFA G LG+YAL+ L+ M YQ
Sbjct: 531 RNRDEPLKDEKNKQMVTFMDIVAYLKPKYVLMENVVDILKFADGYLGKYALSCLVAMKYQ 590
Query: 602 VRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDE 661
R+GMM AG YGLPQFRMRVFLWGA + LP Y LPT+DVV+RG P F + VAYDE
Sbjct: 591 ARLGMMVAGCYGLPQFRMRVFLWGALSSMVLPKYPLPTYDVVVRGGAPNAFSQCMVAYDE 650
Query: 662 GQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQCFIRL-RKD 711
Q+ L + LLL DA SDLP V+N++ D + Y P+TEFQ +IRL RKD
Sbjct: 651 TQRPSLKKALLLGDAFSDLPKVENHQPNDVMEYGGSPKTEFQRYIRLGRKD 701
>gi|162460714|ref|NP_001105167.1| DNA (cytosine-5)-methyltransferase 3 [Zea mays]
gi|75167623|sp|Q9ARI6.1|CMT2_MAIZE RecName: Full=DNA (cytosine-5)-methyltransferase 2; AltName:
Full=Chromomethylase 2; AltName: Full=DNA cytosine
methyltransferase MET5; AltName: Full=Zea
methyltransferase5; Short=Zmet5
gi|13272199|gb|AAK15805.1| chromomethylase [Zea mays]
Length = 915
Score = 615 bits (1587), Expect = e-173, Method: Compositional matrix adjust.
Identities = 319/591 (53%), Positives = 395/591 (66%), Gaps = 32/591 (5%)
Query: 128 DDEPEARFLGDPVPDGEARQRWPKRYEVKKQKRRNQKDDDEEEIIQAKCHYMWAEVDGHI 187
D PE F+G PV EA WPKRYE + ++DD+ ++A+CHY A+VD +I
Sbjct: 136 DHVPE--FIGSPVGAAEAHSNWPKRYERSTAANKPEEDDE----LKARCHYRSAKVD-NI 188
Query: 188 TYDLFDDAHVKAESGEEDYICKIVEMFEAVDGTPYFTAQWYYRARDTVIES------NAH 241
Y L DD +VKA E DYI +I E FE D YFT +W++RA DTVI S + H
Sbjct: 189 VYCLGDDVYVKAGENEADYIGRITEFFEGTDRCHYFTCRWFFRAEDTVINSLVSINVDGH 248
Query: 242 LIDQRRVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLAIPHCDYYCDMMYLLPYST 301
D RRVF SE +NDN L+C++ K+ I V N+D +AK I HCD Y DM Y + YST
Sbjct: 249 KHDPRRVFLSEEKNDNVLDCIISKVKIVHVDPNMDPKAKAQLIEHCDLYYDMSYSVAYST 308
Query: 302 FFSLPPENKRVSSETSSTISSDVDANECEVGEPQKMDVKLLDLYSGCGAMSTGLCLGANL 361
F ++ EN + SET+S ISSD E P++ LLDLYSGCG MSTGLCLGA L
Sbjct: 309 FANISSENGQSGSETASGISSDDAGLETSSNMPERT-ATLLDLYSGCGGMSTGLCLGAAL 367
Query: 362 AGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWEKLCISFSLIARKDP 421
+GL L TRWAVD+N +ACQSLK NHP+TEVRNE A++FL LL+EW LC + +D
Sbjct: 368 SGLKLETRWAVDLNSFACQSLKYNHPQTEVRNEKADEFLALLKEWAVLCEKY---VHQDV 424
Query: 422 QQQLYSFNDDGESEEDDDNGNVEDESEDDSEIFEVEKILKICYGDPKEIKKRGLYLKVRW 481
L ED ++ + D+ E F V+K++ I Y +K+G+Y KV+W
Sbjct: 425 DSNL-------AGSEDQEDADTLDKDE-----FVVQKLIGIRYDGTG--RKKGVYFKVQW 470
Query: 482 RNYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRF 541
YGP EDTWEPI+ LS+C KI+EFV G K KILPLPGDVDVICGGPPCQG+SGFNRF
Sbjct: 471 EEYGPEEDTWEPIDNLSDCPLKIREFVQEGRKRKILPLPGDVDVICGGPPCQGISGFNRF 530
Query: 542 RNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQ 601
RN+D PL DEKNKQ++ FMDIV +LKPK+VLMENVVDI+KFA G LG+YAL+ L+ M YQ
Sbjct: 531 RNRDEPLKDEKNKQMVTFMDIVAYLKPKYVLMENVVDILKFADGYLGKYALSCLVAMKYQ 590
Query: 602 VRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDE 661
R+GMM AG YGLPQFRMRVFLWGA + LP Y LPT+DVV+RG P F + VAYDE
Sbjct: 591 ARLGMMVAGCYGLPQFRMRVFLWGALSSMVLPKYPLPTYDVVVRGGAPNAFSQCMVAYDE 650
Query: 662 GQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQCFIRL-RKD 711
Q+ L + LLL DA SDLP V+N++ D + Y P+TEFQ +IRL RKD
Sbjct: 651 TQRPSLKKALLLGDAFSDLPKVENHQPNDVMEYGGSPKTEFQRYIRLGRKD 701
>gi|414585462|tpg|DAA36033.1| TPA: hypothetical protein ZEAMMB73_314017 [Zea mays]
Length = 849
Score = 615 bits (1585), Expect = e-173, Method: Compositional matrix adjust.
Identities = 319/591 (53%), Positives = 395/591 (66%), Gaps = 32/591 (5%)
Query: 128 DDEPEARFLGDPVPDGEARQRWPKRYEVKKQKRRNQKDDDEEEIIQAKCHYMWAEVDGHI 187
D PE F+G PV EA WPKRYE + ++DD+ ++A+CHY A+VD +I
Sbjct: 136 DHVPE--FIGSPVAAAEAHSNWPKRYERSTAANKPEEDDE----LKARCHYRSAKVD-NI 188
Query: 188 TYDLFDDAHVKAESGEEDYICKIVEMFEAVDGTPYFTAQWYYRARDTVIES------NAH 241
Y L DD +VKA E DYI +I E FE D YFT +W++RA DTVI S + H
Sbjct: 189 VYCLGDDVYVKAGENEADYIGRITEFFEGTDRCHYFTCRWFFRAEDTVINSLVSINVDGH 248
Query: 242 LIDQRRVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLAIPHCDYYCDMMYLLPYST 301
D RRVF SE +NDN L+C++ K+ I V N+D +AK I HCD Y DM Y + YST
Sbjct: 249 KHDPRRVFLSEEKNDNVLDCIISKVKIVHVDPNMDPKAKAQLIEHCDLYYDMSYSVAYST 308
Query: 302 FFSLPPENKRVSSETSSTISSDVDANECEVGEPQKMDVKLLDLYSGCGAMSTGLCLGANL 361
F ++ EN + SET+S ISSD E P++ LLDLYSGCG MSTGLCLGA L
Sbjct: 309 FANISSENGQSGSETASGISSDDAGLETSSNMPERT-ATLLDLYSGCGGMSTGLCLGAAL 367
Query: 362 AGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWEKLCISFSLIARKDP 421
+GL L TRWAVD+N +ACQSLK NHP+TEVRNE A++FL LL+EW LC + +D
Sbjct: 368 SGLKLETRWAVDLNSFACQSLKYNHPQTEVRNEKADEFLALLKEWAVLCEKY---VHQDV 424
Query: 422 QQQLYSFNDDGESEEDDDNGNVEDESEDDSEIFEVEKILKICYGDPKEIKKRGLYLKVRW 481
L ED ++ + D+ E F V+K++ I Y +K+G+Y KV+W
Sbjct: 425 DSNL-------AGSEDQEDADTLDKDE-----FVVQKLIGIRYDGTG--RKKGVYFKVQW 470
Query: 482 RNYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRF 541
YGP EDTWEPI+ LS+C KI+EFV G K KILPLPGDVDVICGGPPCQG+SGFNRF
Sbjct: 471 EGYGPEEDTWEPIDNLSDCPLKIREFVQEGRKRKILPLPGDVDVICGGPPCQGISGFNRF 530
Query: 542 RNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQ 601
RN+D PL DEKNKQ++ FMDIV +LKPK+VLMENVVDI+KFA G LG+YAL+ L+ M YQ
Sbjct: 531 RNRDEPLKDEKNKQMVTFMDIVAYLKPKYVLMENVVDILKFADGYLGKYALSCLVAMKYQ 590
Query: 602 VRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDE 661
R+GMM AG YGLPQFRMRVFLWGA + LP Y LPT+DVV+RG P F + VAYDE
Sbjct: 591 ARLGMMVAGCYGLPQFRMRVFLWGALSSMVLPKYPLPTYDVVVRGGAPNAFSQCMVAYDE 650
Query: 662 GQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQCFIRL-RKD 711
Q+ L + LLL DA SDLP V+N++ D + Y P+TEFQ +IRL RKD
Sbjct: 651 TQRPSLKKALLLGDAFSDLPKVENHQPNDVMEYGGSPKTEFQRYIRLGRKD 701
>gi|356560887|ref|XP_003548718.1| PREDICTED: DNA (cytosine-5)-methyltransferase CMT2-like [Glycine
max]
Length = 1143
Score = 614 bits (1584), Expect = e-173, Method: Compositional matrix adjust.
Identities = 325/630 (51%), Positives = 422/630 (66%), Gaps = 48/630 (7%)
Query: 101 KVNKNRSSSKKPIDSVKKLPVRGEHDDDDEPEARFLGDPVPDGEARQRWPKRYEVK---- 156
K N + SS+K+ IDS E F+GDP+PD EA++RW RYE+K
Sbjct: 293 KFNTSTSSTKECIDS--------------ENFPSFIGDPIPDDEAQKRWGWRYELKVVDL 338
Query: 157 ----KQKRRNQ---KDDDEEEII-QAKCHYMWAEVDGHITYDLFDDAHVKAESGEEDYIC 208
K+ + N + +E+EII KCHY AE+ G+ + L D A VK E GEE ++
Sbjct: 339 ILSDKKCKDNMFKINEGEEDEIIANVKCHYAQAEI-GNCIFSLGDCAFVKGE-GEEKHVG 396
Query: 209 KIVEMFEAVDGTPYFTAQWYYRARDTVIESNAHLIDQRRVFFSEIQNDNPLECLVKKLNI 268
KI+E F+ DG YF QW+YR +DTV++ D+RRVF+S I NDN ++C++ K N+
Sbjct: 397 KIIEFFQTTDGQNYFRVQWFYRIQDTVVQDEGGFHDKRRVFYSAIMNDNLIDCIMGKANV 456
Query: 269 ARVPLNIDLEAKKLAIPHCDYYCDMMYLLPYSTFFSL--PPENKRVSS----ETSSTISS 322
+ + L K +I D+Y DM Y + YSTF +L P + +S E+ ST +S
Sbjct: 457 THITPRVGL--KLASISSSDFYYDMEYCVDYSTFRTLNNPVKTNELSPPSVLESLSTDAS 514
Query: 323 DVDANECEVGEPQKMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSL 382
V ++ E K ++ LLDLYSGCG MSTGLCLGA A +NLVTRWAVD + A +SL
Sbjct: 515 TVTESQ-PCSELNKTELALLDLYSGCGGMSTGLCLGAKTASVNLVTRWAVDSDRSAGESL 573
Query: 383 KLNHPETEVRNESAEDFLTLLREWEKLCISFSLIA--RKDPQQQLYSFNDDGESEEDDDN 440
KLNH +T VRNESAEDFL LL+ WEKLC +++ + RK P + N G +
Sbjct: 574 KLNHSDTHVRNESAEDFLELLKAWEKLCKRYNVSSTERKLP----FRSNSSGAKKR---- 625
Query: 441 GNVEDESEDDSEIFEVEKILKICYGDPKEIKKRGLYLKVRWRNYGPSEDTWEPIEGLSNC 500
GN E D E+ EV K++ IC+GDP E KRGLYLKV W+ Y SEDTWEPI+ LS C
Sbjct: 626 GNSEVHEISDGEL-EVSKLVDICFGDPNETGKRGLYLKVHWKGYSASEDTWEPIKSLSKC 684
Query: 501 GEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFM 560
E +++FV G KS ILPLPG+VDVICGGPPCQG+SG+NRFRN +PL DE+N+Q+++FM
Sbjct: 685 KESMQDFVRKGMKSNILPLPGEVDVICGGPPCQGISGYNRFRNCASPLDDERNRQIVIFM 744
Query: 561 DIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMR 620
D+V FLKP++VLMENVVDI++F KG LGRYAL+RL+ MNYQ R+G++AAG YGLPQFR+R
Sbjct: 745 DMVKFLKPRYVLMENVVDILRFDKGSLGRYALSRLVHMNYQARLGIIAAGCYGLPQFRLR 804
Query: 621 VFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDL 680
VFLWGA P+E +P + LPTHDV++R P EFERN VAYDE Q EL + ++QDAISDL
Sbjct: 805 VFLWGAHPSEVIPQFPLPTHDVIVRYWPPPEFERNVVAYDEEQPRELEKATVIQDAISDL 864
Query: 681 PSVDNYESRDEIPYDREPETEFQCFIRLRK 710
P+V N E+RDE+PY PETEFQ +IR K
Sbjct: 865 PAVMNTETRDEMPYQNPPETEFQRYIRSTK 894
>gi|357140240|ref|XP_003571678.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3-like [Brachypodium
distachyon]
Length = 898
Score = 613 bits (1581), Expect = e-172, Method: Compositional matrix adjust.
Identities = 337/705 (47%), Positives = 445/705 (63%), Gaps = 47/705 (6%)
Query: 12 RLSSKRCRCGLPLSRSPAAAAAAAAAAATTTTTMPTKRKTRSSVNDNTSLSSKKSKVEPE 71
R +S + ++ P AAA++ T ++ R K+ +V E
Sbjct: 22 RTASAKAELAQEATKRPRKAAASSGKKKVTKPKAKAEKAPRKK---------KEVEVLGE 72
Query: 72 PEACVEKEGEVAEVICENSVAGSGSSSGVKVNKNRSSSKKPIDSVKKLPVRGEHDDDDEP 131
E C E+ E + E ++SG + + ++++K + P+R + +
Sbjct: 73 DEVCAEEPDEEELALGEED---ESAASGEQQPEEPAAARKRVAQ----PIRARNQAGGDK 125
Query: 132 EARFLGDPVPDGEARQRWPKRYEVKKQKRRNQKDDDEEEIIQAKCHYMWAEVDGHITYDL 191
+ F+G P P GEAR +WP+RY+ K +R ++++D +A+CHY A+VD I Y+L
Sbjct: 126 DHGFVGAPFPAGEARSKWPQRYQPTKPRRPEEEEEDP----KARCHYRSAKVDEAI-YNL 180
Query: 192 FDDAHVKAESGEEDYICKIVEMFEAVDGTPYFTAQWYYRARDTVIES----NAHLIDQRR 247
DD +V A E YI +I E FE +D YFT +W++R DTVI + N H D +R
Sbjct: 181 GDDVYVMAGENEPHYIGRITEFFEGIDKKCYFTCRWFFRPEDTVISTAKFVNDHTHDPKR 240
Query: 248 VFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLAIPHCDYYCDMMYLLPYSTFFSLPP 307
VF SE +NDN LEC+V K+NI V N+D EAK + D Y DM Y + YSTF ++
Sbjct: 241 VFLSEEKNDNVLECIVLKVNIVHVDPNMDSEAKAQLVAESDLYYDMSYSVAYSTFANITS 300
Query: 308 ENKRVSSETSSTISSDVDANECEVGEPQKMDVKLLDLYSGCGAMSTGLCLGANLAGLNLV 367
N +++ S ISSDVD+ E P + V LLDLYSGCG MSTGLCLG+ LAGL L
Sbjct: 301 GNFCYTNDNSG-ISSDVDS---EAASPVRTAV-LLDLYSGCGGMSTGLCLGSALAGLKLE 355
Query: 368 TRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWEKLCISFSLIARKDPQQQLYS 427
TRWAVD+N +AC+SLK NHP TEVRNE AEDFL LL+EW LC ++ ++
Sbjct: 356 TRWAVDLNSFACKSLKYNHPGTEVRNEKAEDFLALLKEWAILCDTY-----------VHG 404
Query: 428 FNDDGESEEDDDNGNVEDESEDDSEIFEVEKILKICYGDPKEIKKRGLYLKVRWRNYGPS 487
N D S +D+ + E +D+ F VEK+L+ICYG +++ +Y KV+W+ YGP
Sbjct: 405 NNSDPASPSEDEEEDDEPLGKDE---FVVEKLLEICYGGSG--REKAIYFKVQWKGYGPE 459
Query: 488 EDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNP 547
EDTWEPI LS+C KIKEFV G K ILPLPGDV+VICGGPPCQG+SGFNRFRN+ P
Sbjct: 460 EDTWEPIGNLSDCPLKIKEFVQEGHKRNILPLPGDVEVICGGPPCQGISGFNRFRNRKEP 519
Query: 548 LADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMM 607
L DEKN+Q++ FMDIV +LKPKFVLMENVVDI+KFA G LGRYAL+RL+ +NYQ R+G+M
Sbjct: 520 LKDEKNQQMVTFMDIVSYLKPKFVLMENVVDILKFADGYLGRYALSRLVSLNYQARLGIM 579
Query: 608 AAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAEL 667
AG YGLPQFRMRVFLWGA P LP Y LPTHDVV+RG P F ++ VAYDE Q+ L
Sbjct: 580 VAGCYGLPQFRMRVFLWGALPAMVLPKYPLPTHDVVVRGGAPNAFSQSIVAYDETQKPTL 639
Query: 668 ARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQCFIRL-RKD 711
+ LLL DAISDLP +N++ + + Y +P+TEFQ +IRL RKD
Sbjct: 640 KKALLLGDAISDLPKANNFQPHEVMEYGAQPKTEFQSYIRLSRKD 684
>gi|357141720|ref|XP_003572323.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3-like [Brachypodium
distachyon]
Length = 897
Score = 612 bits (1578), Expect = e-172, Method: Compositional matrix adjust.
Identities = 318/591 (53%), Positives = 400/591 (67%), Gaps = 39/591 (6%)
Query: 128 DDEPEARFLGDPVPDGEARQRWPKRYEVKKQKRRNQKDDDEEEIIQAKCHYMWAEVDGHI 187
D EPE F+G+P P EAR +W +RY+ +R DEE ++A+CHY A VDG +
Sbjct: 125 DKEPE--FVGEPFPADEARSKWSQRYQRAAPRR-----PDEEPELKARCHYRSANVDGTV 177
Query: 188 TYDLFDDAHVKAESGEEDYICKIVEMFEAVDGTPYFTAQWYYRARDTVIES----NAHLI 243
Y L DD +VKA E DYI +I E FE D YF +W++R DTVI + + H
Sbjct: 178 -YALGDDVYVKAAENEADYIGRITEFFEGTDRHCYFACRWFFRPEDTVISTAKFVDDHTH 236
Query: 244 DQRRVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKK--LAIPHCDYYCDMMYLLPYST 301
D +RVF SE NDN L+C++KK+ I V N+D E K +A + Y DM Y + YST
Sbjct: 237 DPKRVFLSEETNDNVLDCIIKKVKIIHVDPNMDPEGKAQLVADSEAELYYDMSYAVAYST 296
Query: 302 FFSLPPENKRVSSETSSTISSDVDANECEVGEPQKMDVKLLDLYSGCGAMSTGLCLGANL 361
F ++P + + +S ISSD D E G P LLDLYSGCG MSTGLCLGA L
Sbjct: 297 FANIPSD-----TNENSGISSDAD---LEAGTPPVRTAALLDLYSGCGGMSTGLCLGAAL 348
Query: 362 AGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWEKLCISFSLIARKDP 421
AGL L TRWAVD+N +AC+SLK NHP TEVRNE AE+FL LL+EW LC ++
Sbjct: 349 AGLKLETRWAVDLNSFACKSLKYNHPGTEVRNEKAEEFLALLKEWAILCDTY-------- 400
Query: 422 QQQLYSFNDDGESEEDDDNGNVEDESEDDSEIFEVEKILKICYGDPKEIKKRGLYLKVRW 481
++ N + +S +D+ + E ++D+ F VEK+L+ICYG + +G+Y KV+W
Sbjct: 401 ---VHVNNSESDSPIEDEEEDDEPLAKDE---FVVEKLLEICYGGSG--RGKGIYFKVQW 452
Query: 482 RNYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRF 541
+ YGP EDTWEPI LS+C KIKEFV G K KILPLPGDVDVICGGPPCQG+SGFNRF
Sbjct: 453 KGYGPEEDTWEPIGNLSDCQLKIKEFVQEGHKRKILPLPGDVDVICGGPPCQGISGFNRF 512
Query: 542 RNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQ 601
RN+ PL DEKN+Q++ FMDIV +LKPKFVLMENVVDI+KFA G LGRYAL+RL+ +NYQ
Sbjct: 513 RNRKEPLKDEKNQQMVTFMDIVSYLKPKFVLMENVVDILKFADGYLGRYALSRLVALNYQ 572
Query: 602 VRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDE 661
R+GMM AG YGLPQFRMRVFLWGA P LP Y LPT+DVV+RG++P F ++ VAYDE
Sbjct: 573 ARLGMMVAGCYGLPQFRMRVFLWGALPDMVLPKYPLPTYDVVVRGIVPNAFSQSVVAYDE 632
Query: 662 GQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQCFIRL-RKD 711
Q+ L + LLL DAISDLP +NY+ + + Y +P+TEFQ +IRL RKD
Sbjct: 633 TQKPTLKKALLLGDAISDLPEANNYQLHEVMEYGTKPKTEFQRYIRLGRKD 683
>gi|409107272|pdb|4FSX|A Chain A, Crystal Structure Of Se-Substituted Zea Mays Zmet2 In
Complex With Sah
gi|409107273|pdb|4FSX|B Chain B, Crystal Structure Of Se-Substituted Zea Mays Zmet2 In
Complex With Sah
Length = 784
Score = 594 bits (1532), Expect = e-167, Method: Compositional matrix adjust.
Identities = 313/595 (52%), Positives = 386/595 (64%), Gaps = 40/595 (6%)
Query: 128 DDEPEARFLGDPVPDGEARQRWPKRYEVKKQKRRNQKDDDEEEIIQAKCHYMWAEVDGHI 187
D EPE F+G PV EAR WPKRY + K DEEE ++A+CHY A+VD ++
Sbjct: 4 DHEPE--FIGSPVAADEARSNWPKRY----GRSTAAKKPDEEEELKARCHYRSAKVD-NV 56
Query: 188 TYDLFDDAHVKAESGEEDYICKIVEMFEAVDGTPYFTAQWYYRARDTVIES------NAH 241
Y L DD +VKA E DYI +I E FE D YFT +W++RA DTVI S + H
Sbjct: 57 VYCLGDDVYVKAGENEADYIGRITEFFEGTDQCHYFTCRWFFRAEDTVINSLVSISVDGH 116
Query: 242 LIDQRRVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLAIPHCDYYCDMMYLLPYST 301
D RRVF SE +NDN L+C++ K+ I V N D +AK I CD Y D Y + YST
Sbjct: 117 KHDPRRVFLSEEKNDNVLDCIISKVKIVHVDPNXDPKAKAQLIESCDLYYDXSYSVAYST 176
Query: 302 FFSLPPENKRVSSETSSTISSDVDANECEVGEPQKMDVKLLDLYSGCGAMSTGLCLGANL 361
F ++ EN + S+T+S ISSD E P + LLDLYSGCG STGLCLGA L
Sbjct: 177 FANISSENGQSGSDTASGISSDDVDLETSSSXPTRT-ATLLDLYSGCGGXSTGLCLGAAL 235
Query: 362 AGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWEKLCISFSLIARKDP 421
+GL L TRWAVD N +ACQSLK NHP+TEVRNE A++FL LL+EW LC +
Sbjct: 236 SGLKLETRWAVDFNSFACQSLKYNHPQTEVRNEKADEFLALLKEWAVLCKKYV------- 288
Query: 422 QQQLYSFNDDGESEEDDDNGNVEDESEDDSEI----FEVEKILKICYGDPKEIKKRGLYL 477
+ D + + ED++++DS + F VEK++ ICYG ++ G+Y
Sbjct: 289 ------------QDVDSNLASSEDQADEDSPLDKDEFVVEKLVGICYGGSD--RENGIYF 334
Query: 478 KVRWRNYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSG 537
KV+W YGP EDTWEPI+ LS+C +KI+EFV G K KILPLPGDVDVICGGPPCQG+SG
Sbjct: 335 KVQWEGYGPEEDTWEPIDNLSDCPQKIREFVQEGHKRKILPLPGDVDVICGGPPCQGISG 394
Query: 538 FNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQ 597
FNR+RN+D PL DEKNKQ + F DIV +LKPK+VL ENVVDI+KFA G LG+YAL+ L+
Sbjct: 395 FNRYRNRDEPLKDEKNKQXVTFXDIVAYLKPKYVLXENVVDILKFADGYLGKYALSCLVA 454
Query: 598 MNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNTV 657
YQ R+G AG YGLPQFR RVFLWGA + LP Y LPT+DVV+RG P F + V
Sbjct: 455 XKYQARLGXXVAGCYGLPQFRXRVFLWGALSSXVLPKYPLPTYDVVVRGGAPNAFSQCXV 514
Query: 658 AYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQCFIRL-RKD 711
AYDE Q+ L + LLL DAISDLP V N++ D Y P+TEFQ +IRL RKD
Sbjct: 515 AYDETQKPSLKKALLLGDAISDLPKVQNHQPNDVXEYGGSPKTEFQRYIRLSRKD 569
>gi|42566945|ref|NP_193637.2| chromomethylase 2 [Arabidopsis thaliana]
gi|322510132|sp|Q94F87.3|CMT2_ARATH RecName: Full=DNA (cytosine-5)-methyltransferase CMT2; AltName:
Full=Chromomethylase 2; AltName: Full=Protein
CHROMOMETHYLASE 2
gi|332658726|gb|AEE84126.1| chromomethylase 2 [Arabidopsis thaliana]
Length = 1295
Score = 588 bits (1516), Expect = e-165, Method: Compositional matrix adjust.
Identities = 322/714 (45%), Positives = 449/714 (62%), Gaps = 32/714 (4%)
Query: 10 SLRLSSKRCRCGLPLSRSPAA--AAAAAAAAATTTTTMPTKRKTRSSVNDNTSLSSKKSK 67
SL++S GL ++ + A + T+ K KTR ++T + S
Sbjct: 399 SLKISKNDTSNGLTMTTALVEQDAMESLLQGKTSACGAADKGKTREMHVNSTVIYLSDSD 458
Query: 68 VEPEPEACVEKEGEVAEVICENSVAGSGSSSGV---KVNKNRSSSKKPIDSVKKLPVRGE 124
EP + G+ + S SG + G+ +N S+K+ V + V
Sbjct: 459 ---EPSSIEYLNGDNLTQVESGSALSSGGNEGIVSLDLNNPTKSTKRKGKRVTRTAV--- 512
Query: 125 HDDDDEPEARFLGDPVPDGEARQRWPKRYEVKKQK---RRNQKDDDEEEII-QAKCHYMW 180
+ + F+G+P+ EA++RW RYE+K++K R Q +DDE++I+ +CHY
Sbjct: 513 QEQNKRSICFFIGEPLSCEEAQERWRWRYELKERKSKSRGQQSEDDEDKIVANVECHYSQ 572
Query: 181 AEVDGHITYDLFDDAHVKAESGEEDYICKIVEMFEAVDGTPYFTAQWYYRARDTVIESNA 240
A+VDGH T+ L D A++K E EE ++ +IVE F+ DG YF QW+YRA DT++E A
Sbjct: 573 AKVDGH-TFSLGDFAYIKGEE-EETHVGQIVEFFKTTDGESYFRVQWFYRATDTIMERQA 630
Query: 241 HLIDQRRVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLAIPHCDYYCDMMYLLPYS 300
D+RR+F+S + NDNP++CL+ K+ + +V + L+ + DYY DM Y + YS
Sbjct: 631 TNHDKRRLFYSTVMNDNPVDCLISKVTVLQVSPRVGLKPNSI---KSDYYFDMEYCVEYS 687
Query: 301 TFFSLPPENKRVSSETSSTISSDVDANECEVGEPQKM----DVKLLDLYSGCGAMSTGLC 356
TF +L N + +SE +DV E +K ++ +LDLYSGCG MSTGL
Sbjct: 688 TFQTL--RNPK-TSENKLECCADVVPTESTESILKKKSFSGELPVLDLYSGCGGMSTGLS 744
Query: 357 LGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWEKLCISFSLI 416
LGA ++G+++VT+WAVD N AC+SLKLNHP T+VRN++A DFL LL+EW+KLC + +
Sbjct: 745 LGAKISGVDVVTKWAVDQNTAACKSLKLNHPNTQVRNDAAGDFLQLLKEWDKLCKRY-VF 803
Query: 417 ARKDPQQQLYSFNDDGESEEDDDNGNVEDESEDDSEIFEVEKILKICYGDPKEIKKRGLY 476
L S N E+ + + + +SE+ +EVEK++ IC+GD + K GL
Sbjct: 804 NNDQRTDTLRSVNSTKETSGSSSSSDDDSDSEE----YEVEKLVDICFGDHDKTGKNGLK 859
Query: 477 LKVRWRNYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVS 536
KV W+ Y EDTWE E LSNC + I+EFVT GFKSKILPLPG V VICGGPPCQG+S
Sbjct: 860 FKVHWKGYRSDEDTWELAEELSNCQDAIREFVTSGFKSKILPLPGRVGVICGGPPCQGIS 919
Query: 537 GFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLI 596
G+NR RN D+PL DE+N+Q+IVFMDIV++LKP +VLMENVVDI++ KG LGRYAL+RL+
Sbjct: 920 GYNRHRNVDSPLNDERNQQIIVFMDIVEYLKPSYVLMENVVDILRMDKGSLGRYALSRLV 979
Query: 597 QMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNT 656
M YQ R+G+M AG YGL QFR RVF+WGA P + LPP+ LPTHDV++R +P EFERN
Sbjct: 980 NMRYQARLGIMTAGCYGLSQFRSRVFMWGAVPNKNLPPFPLPTHDVIVRYGLPLEFERNV 1039
Query: 657 VAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQCFIRLRK 710
VAY EGQ +L + L+L+DAISDLP V N E R+++PY+ P+T+FQ +IR K
Sbjct: 1040 VAYAEGQPRKLEKALVLKDAISDLPHVSNDEDREKLPYESLPKTDFQRYIRSTK 1093
>gi|297804242|ref|XP_002870005.1| chromomethylase 2 [Arabidopsis lyrata subsp. lyrata]
gi|297315841|gb|EFH46264.1| chromomethylase 2 [Arabidopsis lyrata subsp. lyrata]
Length = 1253
Score = 583 bits (1502), Expect = e-163, Method: Compositional matrix adjust.
Identities = 298/592 (50%), Positives = 405/592 (68%), Gaps = 37/592 (6%)
Query: 135 FLGDPVPDGEARQRWPKRYEVKKQK---RRNQKDDDEEEII-QAKCHYMWAEVDGHITYD 190
F+G+P+ EA++RW RY++K++K R Q +DDE++I+ +CHY+ A+VDGH T+
Sbjct: 481 FIGEPISCEEAQERWRWRYDLKERKSKSRGQQSEDDEDKIVANVECHYLQAKVDGH-TFS 539
Query: 191 LFDDAHVKAESGEEDYICKIVEMFEAVDGTPYFTAQWYYRARDTVIESNAHLIDQRRVFF 250
L D A +K E EE ++ KI+E F+ D YF QW+YRA DTV++ A D++R+F+
Sbjct: 540 LGDFACIKGEE-EETHVGKILEFFKTTDEESYFRVQWFYRATDTVMKQQATNHDKKRLFY 598
Query: 251 SEIQNDNPLECLVKKLNIARVPLNIDLEAKKLAIPHCDYYCDMMYLLPYSTFFSLPPENK 310
S + NDNP++CL+ K+ + +V L+ + DYY DM Y + YSTF +L +N
Sbjct: 599 STVMNDNPVDCLISKVTVLQVSPMAGLKPNSI---KSDYYFDMEYCVEYSTFQTL--KNP 653
Query: 311 RVSSETSSTISSDVDANECEVGEPQKM----DVKLLDLYSGCGAMSTGLCLGANLAGLNL 366
+ SSE +DV E +K ++ +LDLYSGCG MSTGL LGA ++G+++
Sbjct: 654 K-SSENKLECCADVVPTESTESILKKKIFSGELPVLDLYSGCGGMSTGLSLGAKISGVDV 712
Query: 367 VTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWEKLCISFSLIARKDPQQQLY 426
VT+WAVD N AC+SLKLNHP T+VRN++A DFL LL+EW+KLC + Y
Sbjct: 713 VTKWAVDQNMAACESLKLNHPNTQVRNDAAGDFLQLLKEWDKLC-------------KRY 759
Query: 427 SFNDDGESEEDDDNGNVEDESEDDSEI--------FEVEKILKICYGDPKEIKKRGLYLK 478
FN+D ++ ++++ SE S +EVEK++ IC+GDP + K GL K
Sbjct: 760 VFNNDQRTDTLRSVNSIKETSESSSSRDDDSDSEEYEVEKLVDICFGDPDKTGKNGLKFK 819
Query: 479 VRWRNYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGF 538
V W+ Y EDTWE E LSNC + I+EFVT GFKSKILPLPG V VICGGPPCQG+SG+
Sbjct: 820 VHWKGYRSDEDTWELAEELSNCQDAIREFVTSGFKSKILPLPGCVGVICGGPPCQGISGY 879
Query: 539 NRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQM 598
NR+RN D+PL DE+N+Q+IVFMDIV++LKP +VLMENVVDI++ KG LGRYAL+RL+ M
Sbjct: 880 NRYRNVDSPLNDERNQQIIVFMDIVEYLKPSYVLMENVVDILRLDKGSLGRYALSRLVNM 939
Query: 599 NYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNTVA 658
YQ R+G+M AG YGL QFR RVF+WGA P + LPP+ LPTHDV++R +P EFERN VA
Sbjct: 940 RYQARLGIMTAGCYGLSQFRSRVFMWGAVPNKNLPPFPLPTHDVIVRYGLPLEFERNVVA 999
Query: 659 YDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQCFIRLRK 710
Y EGQ +L + L+L+DAISDLP V N E R+++PY+ PET+FQ +IR K
Sbjct: 1000 YVEGQPRKLEKALVLKDAISDLPHVSNDEDREKLPYESPPETDFQRYIRSTK 1051
>gi|255557861|ref|XP_002519960.1| protein with unknown function [Ricinus communis]
gi|223541006|gb|EEF42564.1| protein with unknown function [Ricinus communis]
Length = 734
Score = 580 bits (1495), Expect = e-163, Method: Compositional matrix adjust.
Identities = 290/531 (54%), Positives = 372/531 (70%), Gaps = 26/531 (4%)
Query: 190 DLFDDAHVKAESGEEDYICKIVEMFEAVDGTPYFTAQWYYRARDTVIESNAHLIDQRRVF 249
DL D ++ E G++ ++ +IVE F+ DG YF QW+YRA DTVI+ A D++R+F
Sbjct: 8 DLHYDQLLQGEGGQK-HVGRIVEFFKTTDGEDYFRVQWFYRAEDTVIKEEAGFHDKKRLF 66
Query: 250 FSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLAIPHCDYYCDMMYLLPYSTFFSLPPEN 309
+S I NDNP++C++ K+ I ++P I K +I D+Y DM Y + YS+F +L
Sbjct: 67 YSTIMNDNPIDCIISKVRIVQLPSMI---GSKSSIRSTDFYFDMEYNVDYSSFRTLLIGK 123
Query: 310 K---RVSS------ETSSTISSDVDANECEVGEPQKMDVKLLDLYSGCGAMSTGLCLGAN 360
R +S E ST + E K ++ LLDL+SGCG MSTGLCLGA
Sbjct: 124 HFCLRDNSSSPNVVEAVSTTGGNTSLENMRSSESNKAELALLDLFSGCGGMSTGLCLGAK 183
Query: 361 LAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWEKLCISFSLIARKD 420
++ ++LVTRWA+D N+ AC+SLKLNHPET VRNE+AEDFL LL+ WEKLC +++ K
Sbjct: 184 VSCVDLVTRWALDSNKSACESLKLNHPETNVRNEAAEDFLELLKVWEKLCKRYAVKDIKS 243
Query: 421 PQQQLYSFNDDGESEEDDDNGNVEDESEDDSEI----FEVEKILKICYGDPKEIKKRGLY 476
QQ S + E++DN S D++I +EV K++ +CYGDP I KRGL
Sbjct: 244 MQQ---SRSIASRVAEENDN------SLSDNDITPGEYEVSKLVDLCYGDPDNIGKRGLK 294
Query: 477 LKVRWRNYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVS 536
KV W+ Y SEDTWEP+EGL NC E I++FV GFKSKILPLPGDVDVICGGPPCQG+S
Sbjct: 295 FKVHWKGYSTSEDTWEPVEGLRNCQECIRDFVRKGFKSKILPLPGDVDVICGGPPCQGIS 354
Query: 537 GFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLI 596
G+NRFRN + PL+DE+N+Q++VFMDIV FLKPKFVLMENVVDI+KF K RYAL+RL+
Sbjct: 355 GYNRFRNVNAPLSDERNRQIVVFMDIVQFLKPKFVLMENVVDILKFDKASFARYALSRLV 414
Query: 597 QMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNT 656
M YQ R+G +AAG YGLPQFR+RVFLWGA P+EKLP + LPTHDV++R P EFERNT
Sbjct: 415 HMKYQARLGTIAAGCYGLPQFRLRVFLWGAHPSEKLPQFPLPTHDVIVRYWPPNEFERNT 474
Query: 657 VAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQCFIR 707
VAYDEGQ EL + +LQDAISDLP V +E+R+E+ Y++ PETEFQ FIR
Sbjct: 475 VAYDEGQPRELEKAAVLQDAISDLPPVTTHETREEMAYEKPPETEFQRFIR 525
>gi|2865420|gb|AAC02662.1| chromomethylase [Arabidopsis thaliana]
Length = 754
Score = 575 bits (1482), Expect = e-161, Method: Compositional matrix adjust.
Identities = 303/605 (50%), Positives = 399/605 (65%), Gaps = 22/605 (3%)
Query: 119 LPVRGEHDDDDEPEAR--FLGDPVPDGEARQRWPKRYEVKKQK---------RRNQKDDD 167
+ R + EPE+ F G P+ E+ RWP RY+ KK K + K +D
Sbjct: 1 MAARNKQKKRAEPESDLCFAGKPMSVVESTIRWPHRYQSKKTKLQAPTKKPANKGGKKED 60
Query: 168 EEEIIQAKCHYMWAEVDGHITYDLFDDAHVKAESGEEDYICKIVEMFEAVDGTPYFTAQW 227
EE I QAKCH+ A VDG + +L DD +V G+ +I K++E+FEA DG PY +W
Sbjct: 61 EEIIKQAKCHFDKALVDG-VLINLNDDVYVTGLPGKLKFIAKVIELFEADDGVPYCRFRW 119
Query: 228 YYRARDTVIESNAHLIDQRRVFFSEIQNDNPLECLVKKLNIARVPL-NIDLEAKKLAIPH 286
YYR DT+IE +HL+ +RVF S +NDNPL C+ K+NIA+VPL I ++ IP
Sbjct: 120 YYRPEDTLIERFSHLVQPKRVFLSNDENDNPLTCIWSKVNIAKVPLPKITSRIEQRVIPP 179
Query: 287 CDYYCDMMYLLPYSTFFSLPPENKRVSSETSSTISSDVDANECEVGEPQKMDVKLLDLYS 346
CDYY DM Y +PY F +S+ S A C K + LLDLYS
Sbjct: 180 CDYYYDMKYEVPYLNF------TSADDGSDASSSLSSDSALNC-FENLHKDEKFLLDLYS 232
Query: 347 GCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREW 406
GCGAMSTG C+GA+++G+ L+T+W+VDIN++AC SLKLNHPETEVRNE+AEDFL LL+EW
Sbjct: 233 GCGAMSTGFCMGASISGVKLITKWSVDINKFACDSLKLNHPETEVRNEAAEDFLALLKEW 292
Query: 407 EKLCISFSLIARKDPQQQLYSFNDDGESEEDDDNGNVEDESEDDSEIFEVEKILKICYGD 466
++LC FSL++ +P + + S +D E EE+DD +E + FEVEK L I +GD
Sbjct: 293 KRLCEKFSLVSSTEPVESI-SELEDEEVEENDDIDEASTGAELEPGEFEVEKFLGIMFGD 351
Query: 467 PKEIKKRGLYLKVRWRNYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDVDVI 526
P+ ++ L L VRW+ Y S DTWEP GL NC EK+KE+V GFKS +LPLPG V +
Sbjct: 352 PQGTGEKTLQLMVRWKGYNSSYDTWEPYSGLGNCKEKLKEYVIDGFKSHLLPLPGTVYTV 411
Query: 527 CGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGL 586
CGGPPCQG+SG+NR+RN + PL D+KN+QL+VF+DI+DFLKP +VLMENVVD+++F+KG
Sbjct: 412 CGGPPCQGISGYNRYRNNEAPLEDQKNQQLLVFLDIIDFLKPNYVLMENVVDLLRFSKGF 471
Query: 587 LGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRG 646
L R+A+A + MNYQ R+GMMAAG+YGLPQ R RVFLW AQP+EKLPPY LPTH+V +
Sbjct: 472 LARHAVASFVAMNYQTRLGMMAAGSYGLPQLRNRVFLWAAQPSEKLPPYPLPTHEVAKKF 531
Query: 647 VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPY-DREPETEFQCF 705
P EF+ V + + +L L L DAISDLP V NY + D + Y D P+TEF+ F
Sbjct: 532 NTPKEFKDLQVGRIQMEFLKLDNALTLADAISDLPPVTNYVANDVMDYNDAAPKTEFENF 591
Query: 706 IRLRK 710
I L++
Sbjct: 592 ISLKR 596
>gi|2766713|gb|AAB95485.1| chromomethylase [Arabidopsis thaliana]
gi|2865414|gb|AAC02659.1| chromomethylase [Arabidopsis thaliana]
Length = 791
Score = 575 bits (1482), Expect = e-161, Method: Compositional matrix adjust.
Identities = 303/605 (50%), Positives = 402/605 (66%), Gaps = 22/605 (3%)
Query: 119 LPVRGEHDDDDEPEAR--FLGDPVPDGEARQRWPKRYEVKKQK---------RRNQKDDD 167
+ R + EPE+ F G P+ E+ RWP RY+ KK K + K +D
Sbjct: 1 MAARNKQKKRAEPESDLCFAGKPMSVVESTIRWPHRYQSKKTKLQAPTKKPANKGGKKED 60
Query: 168 EEEIIQAKCHYMWAEVDGHITYDLFDDAHVKAESGEEDYICKIVEMFEAVDGTPYFTAQW 227
EE I QAKCH+ A VDG + +L DD +V G+ +I K++E+FEA DG PY +W
Sbjct: 61 EEIIKQAKCHFDKALVDG-VLINLNDDVYVTGLPGKLKFIAKVIELFEADDGVPYCRFRW 119
Query: 228 YYRARDTVIESNAHLIDQRRVFFSEIQNDNPLECLVKKLNIARVPL-NIDLEAKKLAIPH 286
YYR DT+IE +HL+ +RVF S +NDNPL C+ K+NIA+VPL I ++ IP
Sbjct: 120 YYRPEDTLIERFSHLVQPKRVFLSNDENDNPLTCIWSKVNIAKVPLPKITSRIEQRVIPP 179
Query: 287 CDYYCDMMYLLPYSTFFSLPPENKRVSSETSSTISSDVDANECEVGEPQKMDVKLLDLYS 346
CDYY DM Y +PY F S + SS +S + + + K + LLDLYS
Sbjct: 180 CDYYYDMKYEVPYLNFISADDGSDASSSLSSDSALNCFE-------NLHKDEKFLLDLYS 232
Query: 347 GCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREW 406
GCGAMSTG C+GA+++G+ L+T+W+VDIN++AC SLKLNHPETEVRNE+AEDFL LL+EW
Sbjct: 233 GCGAMSTGFCMGASISGVKLITKWSVDINKFACDSLKLNHPETEVRNEAAEDFLALLKEW 292
Query: 407 EKLCISFSLIARKDPQQQLYSFNDDGESEEDDDNGNVEDESEDDSEIFEVEKILKICYGD 466
++LC FSL++ +P + + S +D E EE+DD +E + FEVEK L I +GD
Sbjct: 293 KRLCEKFSLVSSTEPVESI-SELEDEEVEENDDIDEASTGAELEPGEFEVEKFLGIMFGD 351
Query: 467 PKEIKKRGLYLKVRWRNYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDVDVI 526
P+ ++ L L VRW+ Y S DTWEP GL NC EK+KE+V GFKS +LPLPG V +
Sbjct: 352 PQGTGEKTLQLMVRWKGYNSSYDTWEPYSGLGNCKEKLKEYVIDGFKSHLLPLPGTVYTV 411
Query: 527 CGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGL 586
CGGPPCQG+SG+NR+RN + PL D+KN+QL+VF+DI+DFLKP +VLMENVVD+++F+KG
Sbjct: 412 CGGPPCQGISGYNRYRNNEAPLEDQKNQQLLVFLDIIDFLKPNYVLMENVVDLLRFSKGF 471
Query: 587 LGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRG 646
L R+A+A + MNYQ R+GMMAAG+YGLPQ R RVFLW AQP+EKLPPY LPTH+V +
Sbjct: 472 LARHAVASFVAMNYQTRLGMMAAGSYGLPQLRNRVFLWAAQPSEKLPPYPLPTHEVAKKF 531
Query: 647 VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPY-DREPETEFQCF 705
P EF+ V + + +L L L DAISDLP V NY + D + Y D P+TEF+ F
Sbjct: 532 NTPKEFKDLQVGRIQMEFLKLDNALTLADAISDLPPVTNYVANDVMDYNDAAPKTEFENF 591
Query: 706 IRLRK 710
I L++
Sbjct: 592 ISLKR 596
>gi|18412893|ref|NP_565245.1| putative DNA (cytosine-5)-methyltransferase CMT1 [Arabidopsis
thaliana]
gi|110832797|sp|O49139.2|CMT1_ARATH RecName: Full=Putative DNA (cytosine-5)-methyltransferase CMT1;
AltName: Full=Chromomethylase 1; AltName: Full=Protein
CHROMOMETHYLASE 1
gi|6503286|gb|AAF14662.1|AC011713_10 Identical to gb|AF039367 ecotype Col-0 chromomethylase (CMT1) gene
from Arabidopsis thaliana [Arabidopsis thaliana]
gi|2865416|gb|AAC02660.1| chromomethylase [Arabidopsis thaliana]
gi|332198321|gb|AEE36442.1| putative DNA (cytosine-5)-methyltransferase CMT1 [Arabidopsis
thaliana]
Length = 791
Score = 575 bits (1482), Expect = e-161, Method: Compositional matrix adjust.
Identities = 303/605 (50%), Positives = 399/605 (65%), Gaps = 22/605 (3%)
Query: 119 LPVRGEHDDDDEPEAR--FLGDPVPDGEARQRWPKRYEVKKQK---------RRNQKDDD 167
+ R + EPE+ F G P+ E+ RWP RY+ KK K + K +D
Sbjct: 1 MAARNKQKKRAEPESDLCFAGKPMSVVESTIRWPHRYQSKKTKLQAPTKKPANKGGKKED 60
Query: 168 EEEIIQAKCHYMWAEVDGHITYDLFDDAHVKAESGEEDYICKIVEMFEAVDGTPYFTAQW 227
EE I QAKCH+ A VDG + +L DD +V G+ +I K++E+FEA DG PY +W
Sbjct: 61 EEIIKQAKCHFDKALVDG-VLINLNDDVYVTGLPGKLKFIAKVIELFEADDGVPYCRFRW 119
Query: 228 YYRARDTVIESNAHLIDQRRVFFSEIQNDNPLECLVKKLNIARVPL-NIDLEAKKLAIPH 286
YYR DT+IE +HL+ +RVF S +NDNPL C+ K+NIA+VPL I ++ IP
Sbjct: 120 YYRPEDTLIERFSHLVQPKRVFLSNDENDNPLTCIWSKVNIAKVPLPKITSRIEQRVIPP 179
Query: 287 CDYYCDMMYLLPYSTFFSLPPENKRVSSETSSTISSDVDANECEVGEPQKMDVKLLDLYS 346
CDYY DM Y +PY F +S+ S A C K + LLDLYS
Sbjct: 180 CDYYYDMKYEVPYLNF------TSADDGSDASSSLSSDSALNC-FENLHKDEKFLLDLYS 232
Query: 347 GCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREW 406
GCGAMSTG C+GA+++G+ L+T+W+VDIN++AC SLKLNHPETEVRNE+AEDFL LL+EW
Sbjct: 233 GCGAMSTGFCMGASISGVKLITKWSVDINKFACDSLKLNHPETEVRNEAAEDFLALLKEW 292
Query: 407 EKLCISFSLIARKDPQQQLYSFNDDGESEEDDDNGNVEDESEDDSEIFEVEKILKICYGD 466
++LC FSL++ +P + + S +D E EE+DD +E + FEVEK L I +GD
Sbjct: 293 KRLCEKFSLVSSTEPVESI-SELEDEEVEENDDIDEASTGAELEPGEFEVEKFLGIMFGD 351
Query: 467 PKEIKKRGLYLKVRWRNYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDVDVI 526
P+ ++ L L VRW+ Y S DTWEP GL NC EK+KE+V GFKS +LPLPG V +
Sbjct: 352 PQGTGEKTLQLMVRWKGYNSSYDTWEPYSGLGNCKEKLKEYVIDGFKSHLLPLPGTVYTV 411
Query: 527 CGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGL 586
CGGPPCQG+SG+NR+RN + PL D+KN+QL+VF+DI+DFLKP +VLMENVVD+++F+KG
Sbjct: 412 CGGPPCQGISGYNRYRNNEAPLEDQKNQQLLVFLDIIDFLKPNYVLMENVVDLLRFSKGF 471
Query: 587 LGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRG 646
L R+A+A + MNYQ R+GMMAAG+YGLPQ R RVFLW AQP+EKLPPY LPTH+V +
Sbjct: 472 LARHAVASFVAMNYQTRLGMMAAGSYGLPQLRNRVFLWAAQPSEKLPPYPLPTHEVAKKF 531
Query: 647 VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPY-DREPETEFQCF 705
P EF+ V + + +L L L DAISDLP V NY + D + Y D P+TEF+ F
Sbjct: 532 NTPKEFKDLQVGRIQMEFLKLDNALTLADAISDLPPVTNYVANDVMDYNDAAPKTEFENF 591
Query: 706 IRLRK 710
I L++
Sbjct: 592 ISLKR 596
>gi|2865422|gb|AAC02663.1| chromomethylase [Arabidopsis thaliana]
Length = 791
Score = 575 bits (1481), Expect = e-161, Method: Compositional matrix adjust.
Identities = 303/605 (50%), Positives = 399/605 (65%), Gaps = 22/605 (3%)
Query: 119 LPVRGEHDDDDEPEAR--FLGDPVPDGEARQRWPKRYEVKKQK---------RRNQKDDD 167
+ R + EPE+ F G P+ E+ RWP RY+ KK K + K +D
Sbjct: 1 MAARNKQKKRAEPESDLCFAGKPMSVVESTIRWPHRYQSKKTKLQAPTKKPANKGGKKED 60
Query: 168 EEEIIQAKCHYMWAEVDGHITYDLFDDAHVKAESGEEDYICKIVEMFEAVDGTPYFTAQW 227
EE I QAKCH+ A VDG + +L DD +V G+ +I K++E+FEA DG PY +W
Sbjct: 61 EEIIKQAKCHFDKALVDG-VLINLNDDVYVTGLPGKLKFIAKVIELFEADDGVPYCRFRW 119
Query: 228 YYRARDTVIESNAHLIDQRRVFFSEIQNDNPLECLVKKLNIARVPL-NIDLEAKKLAIPH 286
YYR DT+IE +HL+ +RVF S +NDNPL C+ K+NIA+VPL I ++ IP
Sbjct: 120 YYRPEDTLIERFSHLVQPKRVFLSNDENDNPLTCIWSKVNIAKVPLPKITSRIEQRVIPP 179
Query: 287 CDYYCDMMYLLPYSTFFSLPPENKRVSSETSSTISSDVDANECEVGEPQKMDVKLLDLYS 346
CDYY DM Y +PY F +S+ S A C K + LLDLYS
Sbjct: 180 CDYYYDMKYEVPYLNF------TSADDGSDASSSLSSDSALNC-FENLHKDEKFLLDLYS 232
Query: 347 GCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREW 406
GCGAMSTG C+GA+++G+ L+T+W+VDIN++AC SLKLNHPETEVRNE+AEDFL LL+EW
Sbjct: 233 GCGAMSTGFCMGASISGVKLITKWSVDINKFACDSLKLNHPETEVRNEAAEDFLALLKEW 292
Query: 407 EKLCISFSLIARKDPQQQLYSFNDDGESEEDDDNGNVEDESEDDSEIFEVEKILKICYGD 466
++LC FSL++ +P + + S +D E EE+DD +E + FEVEK L I +GD
Sbjct: 293 KRLCEKFSLVSSTEPVESI-SELEDEEVEENDDIDEASTGAELEPGEFEVEKFLGIMFGD 351
Query: 467 PKEIKKRGLYLKVRWRNYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDVDVI 526
P+ ++ L L VRW+ Y S DTWEP GL NC EK+KE+V GFKS +LPLPG V +
Sbjct: 352 PQGTGEKTLQLMVRWKGYNSSYDTWEPYSGLGNCKEKLKEYVIDGFKSHLLPLPGTVYTV 411
Query: 527 CGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGL 586
CGGPPCQG+SG+NR+RN + PL D+KN+QL+VF+DI+DFLKP +VLMENVVD+++F+KG
Sbjct: 412 CGGPPCQGISGYNRYRNNEAPLEDQKNQQLLVFLDIIDFLKPNYVLMENVVDLLRFSKGF 471
Query: 587 LGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRG 646
L R+A+A + MNYQ R+GMMAAG+YGLPQ R RVFLW AQP+EKLPPY LPTH+V +
Sbjct: 472 LARHAVASFVAMNYQTRLGMMAAGSYGLPQLRNRVFLWAAQPSEKLPPYPLPTHEVAKKF 531
Query: 647 VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPY-DREPETEFQCF 705
P EF+ V + + +L L L DAISDLP V NY + D + Y D P+TEF+ F
Sbjct: 532 NTPKEFKDLQVGRIQMEFLKLDNALTLADAISDLPPVTNYVANDVMDYNDAAPKTEFENF 591
Query: 706 IRLRK 710
I L++
Sbjct: 592 ISLKR 596
>gi|2865433|gb|AAC02670.1| chromomethylase [Arabidopsis suecica]
Length = 754
Score = 574 bits (1480), Expect = e-161, Method: Compositional matrix adjust.
Identities = 303/605 (50%), Positives = 399/605 (65%), Gaps = 22/605 (3%)
Query: 119 LPVRGEHDDDDEPEAR--FLGDPVPDGEARQRWPKRYEVKKQK---------RRNQKDDD 167
+ R + EPE+ F G P+ E+ RWP RY+ KK K + K +D
Sbjct: 1 MAARNKQKKRAEPESDLCFAGKPMSVVESTIRWPHRYQSKKTKLQAPTKKPANKGGKKED 60
Query: 168 EEEIIQAKCHYMWAEVDGHITYDLFDDAHVKAESGEEDYICKIVEMFEAVDGTPYFTAQW 227
EE I QAKCH+ A VDG + +L DD +V G+ +I K++E+FEA DG PY +W
Sbjct: 61 EEIIKQAKCHFDKALVDG-VLINLNDDVYVTGLPGKLKFIAKVIELFEADDGVPYCRFRW 119
Query: 228 YYRARDTVIESNAHLIDQRRVFFSEIQNDNPLECLVKKLNIARVPL-NIDLEAKKLAIPH 286
YYR DT+IE +HL+ +RVF S +NDNPL C+ K+NIA+VPL I ++ IP
Sbjct: 120 YYRPEDTLIERFSHLVQPKRVFLSNDENDNPLTCIWSKVNIAKVPLPKITSRIEQRVIPP 179
Query: 287 CDYYCDMMYLLPYSTFFSLPPENKRVSSETSSTISSDVDANECEVGEPQKMDVKLLDLYS 346
CDYY DM Y +PY F +S+ S A C K + LLDLYS
Sbjct: 180 CDYYYDMKYEVPYLNF------TSADDGSDASSSLSSDSALNC-FENLHKDEKFLLDLYS 232
Query: 347 GCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREW 406
GCGAMSTG C+GA+++G+ L+T+W+VDIN++AC SLKLNHPETEVRNE+AEDFL LL+EW
Sbjct: 233 GCGAMSTGFCMGASISGVKLITKWSVDINKFACDSLKLNHPETEVRNEAAEDFLALLKEW 292
Query: 407 EKLCISFSLIARKDPQQQLYSFNDDGESEEDDDNGNVEDESEDDSEIFEVEKILKICYGD 466
++LC FSL++ +P + + S +D E EE+DD +E + FEVEK L I +GD
Sbjct: 293 KRLCEKFSLVSSTEPVESI-SELEDEEVEENDDIDEASTGAELEPGEFEVEKFLGIMFGD 351
Query: 467 PKEIKKRGLYLKVRWRNYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDVDVI 526
P+ ++ L L VRW+ Y S DTWEP GL NC EK+KE+V GFKS +LPLPG V +
Sbjct: 352 PQGTGEKTLQLMVRWKGYNSSYDTWEPYSGLGNCKEKLKEYVIDGFKSHLLPLPGIVYTV 411
Query: 527 CGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGL 586
CGGPPCQG+SG+NR+RN + PL D+KN+QL+VF+DI+DFLKP +VLMENVVD+++F+KG
Sbjct: 412 CGGPPCQGISGYNRYRNNEAPLEDQKNQQLLVFLDIIDFLKPNYVLMENVVDLLRFSKGF 471
Query: 587 LGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRG 646
L R+A+A + MNYQ R+GMMAAG+YGLPQ R RVFLW AQP+EKLPPY LPTH+V +
Sbjct: 472 LARHAVASFVAMNYQTRLGMMAAGSYGLPQLRNRVFLWAAQPSEKLPPYPLPTHEVAKKF 531
Query: 647 VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPY-DREPETEFQCF 705
P EF+ V + + +L L L DAISDLP V NY + D + Y D P+TEF+ F
Sbjct: 532 NTPKEFKDLQVGRIQMEFLKLDNALTLADAISDLPPVTNYVANDVMDYNDAAPKTEFENF 591
Query: 706 IRLRK 710
I L++
Sbjct: 592 ISLKR 596
>gi|296088422|emb|CBI37413.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 574 bits (1479), Expect = e-161, Method: Compositional matrix adjust.
Identities = 288/527 (54%), Positives = 370/527 (70%), Gaps = 34/527 (6%)
Query: 202 GEEDYICKIVEMFEAVDGTPYFTAQWYYRARDTVIESNAHLIDQRRVFFSEIQNDNPLEC 261
GE+ ++ +I+E F+ +G YF QW+YRA DTV++ A D++R+F S I NDN L+C
Sbjct: 28 GEQKHVGRILEFFKTTEGEDYFRVQWFYRAEDTVMKEEAASHDKKRIFCSTIMNDNSLDC 87
Query: 262 LVKKLNIA----RVPLNIDLEAKKLAIPHCDYYCDMMYLLPYSTFFSL----------PP 307
++ K+N+ RV L +D +IP DYY DM Y + YSTF +L P
Sbjct: 88 IISKVNVLELTPRVSLKLD------SIPPFDYYYDMKYNVEYSTFHTLLSVKGYDLVSPN 141
Query: 308 ENKRVSSETSSTISSDVDANECEVGEPQKMDVKLLDLYSGCGAMSTGLCLGANLAGLNLV 367
+ S ++T D+D C+ P K ++ LLDLYSGCG MSTGLCLGA L+ +NLV
Sbjct: 142 CIETPLSVANTTFPEDMDG--CK---PDKAELALLDLYSGCGGMSTGLCLGAKLSCVNLV 196
Query: 368 TRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWEKLC--ISFSLIARKDPQQQL 425
T+WA+D ++ AC+SLKLNHPET+VRNE+AEDFL LL+EWE LC + +L+ RK
Sbjct: 197 TKWALDFDKSACESLKLNHPETQVRNETAEDFLDLLKEWEMLCEQYALNLVERK------ 250
Query: 426 YSFNDDGESEEDDDNGNVEDESEDDSEIFEVEKILKICYGDPKEIKKRGLYLKVRWRNYG 485
S + N N + + ++ E+ K++ ICYGDP E KRGL KVRW+ YG
Sbjct: 251 -SQSRSNVLRTSKSNINSPHDIKVATDELEILKLVDICYGDPSETGKRGLKFKVRWKGYG 309
Query: 486 PSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKD 545
PSEDTWEPIEGLSNC E I +FV +G KSKILP PGDVDVICGGPPCQG+SG+NRFRN D
Sbjct: 310 PSEDTWEPIEGLSNCQEGIYDFVRNGLKSKILPRPGDVDVICGGPPCQGISGYNRFRNVD 369
Query: 546 NPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMG 605
+PL+DE+N Q+++FMDIV FLKPK+VLMENVVD++K K LGRYA++RL+ M YQ R+G
Sbjct: 370 SPLSDERNHQIVIFMDIVKFLKPKYVLMENVVDLLKLDKASLGRYAISRLVHMKYQARLG 429
Query: 606 MMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQA 665
M+AAG YGLPQFR+RVFLWGA P E LP + LPTHDVV + P+EFE N VAYDEGQ
Sbjct: 430 MIAAGCYGLPQFRLRVFLWGAHPGESLPQFPLPTHDVVAKYWPPSEFECNIVAYDEGQPR 489
Query: 666 ELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQCFIRLRKDG 712
EL + ++L+DAISDLP+V NYE+RDE+ Y + PETEFQ +IR KD
Sbjct: 490 ELEKAVVLRDAISDLPAVTNYETRDEMLYGKPPETEFQKYIRSTKDA 536
>gi|68655470|emb|CAJ01708.1| chromomethylase 1 [Hordeum vulgare subsp. vulgare]
Length = 735
Score = 573 bits (1476), Expect = e-160, Method: Compositional matrix adjust.
Identities = 298/536 (55%), Positives = 366/536 (68%), Gaps = 32/536 (5%)
Query: 181 AEVDGHITYDLFDDAHVKAESGEEDYICKIVEMFEAVDGTPYFTAQWYYRARDTVIES-- 238
A+VD + Y L DD +V A E DYI +I E FE VD T YFT +W++R DTVI
Sbjct: 12 AKVD-DVDYTLGDDVYVMAGENEADYIGRITEFFEGVDKTNYFTCRWFFRPEDTVISRAK 70
Query: 239 --NAHLIDQRRVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLAIPHCDYYCDMMYL 296
N H D +RVF SE +NDNPL+C++ K+ I V N D K + D Y DM Y
Sbjct: 71 FVNDHTHDPKRVFLSEEKNDNPLDCIISKVKIIHVDPNTDSVTKAKLVAGTDLYYDMSYS 130
Query: 297 LPYSTFFSLPPENKRVSSETSSTISSDVDANECEVGEPQKMDVKLLDLYSGCGAMSTGLC 356
+ YSTF ++P + + +S IS+D D+ E G P K LLDLYSGCG MSTGLC
Sbjct: 131 VAYSTFANIPSD-----TTENSGISTDADS---ENGTPVKT-ASLLDLYSGCGGMSTGLC 181
Query: 357 LGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWEKLCISFSLI 416
LG+ LAGL L T+WAVD+N +AC+SLK NHP+TEVRNE AEDFL LL+EW LC
Sbjct: 182 LGSALAGLKLETKWAVDLNSFACKSLKYNHPKTEVRNEKAEDFLALLKEWVILC------ 235
Query: 417 ARKDPQQQLYSFNDDGESEEDDDNGNVEDESEDDSEIFEVEKILKICYGDPKEIKKRGLY 476
+ ND +E ++ + E +D+ F V+K+L ICYG +K G+Y
Sbjct: 236 ------DKYVHGNDSDAAEPVEEEEDDEPLGKDE---FVVQKLLGICYGGSG--RKNGIY 284
Query: 477 LKVRWRNYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVS 536
KV+W+ YGP EDTWEPIE LS+C KIKEFV G+K ILP PG VDVICGGPPCQG+S
Sbjct: 285 FKVQWKGYGPEEDTWEPIENLSDCPLKIKEFVQEGYKRNILPQPGQVDVICGGPPCQGIS 344
Query: 537 GFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLI 596
GFNRFRN+DNPL DEKN+Q++ +MDIV +L+PKFVLMENVVDI+KFA G LGRYAL+RL+
Sbjct: 345 GFNRFRNRDNPLQDEKNQQMVTYMDIVSYLQPKFVLMENVVDILKFADGYLGRYALSRLV 404
Query: 597 QMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNT 656
+NYQ R+GMM AG YGLPQFRMRVFLWG+ PT LP Y LPTHDVV+RG P F ++
Sbjct: 405 SLNYQARLGMMVAGCYGLPQFRMRVFLWGSLPTMVLPKYPLPTHDVVVRGGAPNAFSQSI 464
Query: 657 VAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQCFIRL-RKD 711
VAYDE Q+ L + LLL DAISDLP VDNY+ + I Y +P+TEFQ +IRL RKD
Sbjct: 465 VAYDETQRPILKKALLLGDAISDLPKVDNYQPHEVIEYRGQPKTEFQRYIRLSRKD 520
>gi|226088550|dbj|BAH37020.1| chromomethylase OsMET2b [Oryza sativa Japonica Group]
Length = 690
Score = 571 bits (1472), Expect = e-160, Method: Compositional matrix adjust.
Identities = 292/536 (54%), Positives = 365/536 (68%), Gaps = 29/536 (5%)
Query: 189 YDLFDDAHVKAESGEEDYICKIVEMFEAVDGTPYFTAQWYYRARDTVIES-----NAHLI 243
Y L DD +VKA EE+YI +I E FE VD YF+ QW++R DTVI S + H
Sbjct: 6 YHLDDDVYVKAGPDEENYIGRITEFFEGVDRGSYFSCQWFFRTADTVISSKLLKVHDHRH 65
Query: 244 DQRRVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLAIPHCDYYCDMMYLLPYSTFF 303
+ +RVF S+ +NDN +EC+V K+ IA V N+ +A+ AI CD Y DM Y + YSTF
Sbjct: 66 NHKRVFLSKEKNDNLIECIVSKVKIAHVDPNMTPQARAHAISDCDLYYDMSYSVAYSTFA 125
Query: 304 SLPPENK-RVSSETSSTISSDVDANECEVGE----------PQKMDVKLLDLYSGCGAMS 352
+LP +N + SE +S IS D DA+ G+ Q LLDLYSGCGAMS
Sbjct: 126 NLPADNDGALGSEATSNISCD-DADNSSKGKLSADIVAPYSEQTETASLLDLYSGCGAMS 184
Query: 353 TGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWEKLCIS 412
TGLCLG +G+NL TRWAVDIN+YAC LK NHP ++VRNE EDFL L+++W+ LC
Sbjct: 185 TGLCLGFAFSGINLETRWAVDINKYACACLKHNHPYSQVRNEKTEDFLALIQQWDALC-- 242
Query: 413 FSLIARKDPQQQLYSFNDDGESEEDDDNGNVEDESEDDSE-IFEVEKILKICYGDPKEIK 471
++ + ND E D + +D +E E IF+VE++L+ICYGDP
Sbjct: 243 ---------RKYVVHKNDTLEPSIDMPLNDADDVNEPLPEDIFDVEELLEICYGDPSNTG 293
Query: 472 KRGLYLKVRWRNYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDVDVICGGPP 531
K GL+ KVRW+ Y PS DTWEPI+GLS+C E+IKEFV G K ILPLPG VDVICGGPP
Sbjct: 294 KNGLWFKVRWKGYDPSYDTWEPIDGLSDCPERIKEFVEKGHKENILPLPGAVDVICGGPP 353
Query: 532 CQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYA 591
CQG+SGFNRFR ++PL DEKNKQL+VFMDIV +L+PK+VLMENVVDI+KFA G LGRYA
Sbjct: 354 CQGISGFNRFRKHNDPLEDEKNKQLVVFMDIVKYLRPKYVLMENVVDILKFADGFLGRYA 413
Query: 592 LARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTE 651
++ L+ MNYQ R+GMMAAG YGLPQFRMR FLWGA P+ LP + LPTHD V+RG++PT
Sbjct: 414 MSCLVAMNYQARLGMMAAGYYGLPQFRMRAFLWGALPSMVLPKFPLPTHDAVVRGIVPTT 473
Query: 652 FERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQCFIR 707
F ++ VAY+E L + LLL DAISDLP V N + +D I Y P+TEFQ +IR
Sbjct: 474 FSQSVVAYNEVDTRCLRKALLLADAISDLPKVGNDQPKDVIEYSVAPKTEFQRYIR 529
>gi|357120080|ref|XP_003561758.1| PREDICTED: DNA (cytosine-5)-methyltransferase CMT2-like
[Brachypodium distachyon]
Length = 782
Score = 571 bits (1471), Expect = e-160, Method: Compositional matrix adjust.
Identities = 292/584 (50%), Positives = 391/584 (66%), Gaps = 24/584 (4%)
Query: 135 FLGDPVPDGEARQRWPKRYE-----VKKQKRRNQKD--DDEEEIIQAKCHYMWAEVDGHI 187
F+G+ V + EA+QRWP RY+ V+K KR + + +++ KCHY+ A V G
Sbjct: 6 FVGEAVLEEEAKQRWPHRYKKNHHFVEKDKRSGNQPFANAGNDVLDVKCHYLQASVSGS- 64
Query: 188 TYDLFDDAHVKAESGEEDYICKIVEMFEAVDGTPYFTAQWYYRARDTVIESNAHLIDQRR 247
T + D A VK G +YI +I+E FE V G Y QW++RA DTV+E A D RR
Sbjct: 65 TLCVGDCAFVKGPEGRPNYISRILEFFETVAGECYCRVQWFFRAEDTVMEDQAQSNDPRR 124
Query: 248 VFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLAIPHCDYYCDMMYLLPYSTFFSLPP 307
+F+S++Q+D L+C+V KL I +VP +D E+K +IP YY DM Y L YSTF +L
Sbjct: 125 LFYSDLQDDYSLDCIVSKLTIVQVPPCVDKESK--SIPSSQYYYDMKYSLDYSTFSTLEM 182
Query: 308 ENKRV---SSETSSTISSDVDANECEVGE-PQKMDVKLLDLYSGCGAMSTGLCLGANLAG 363
E+ SS SS VD ++ + P K D+ LLDLY GCG MSTGLCLGA+ AG
Sbjct: 183 EDTNAILQSSHASSIEMKKVDFSKKQKSPVPNKKDLSLLDLYCGCGGMSTGLCLGAHGAG 242
Query: 364 LNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWEKLCISFSLIARKDPQQ 423
+NLV +WAVD + AC+S +LNHPET VRNE+ DFL LL+EW+KLC +K +Q
Sbjct: 243 VNLVKKWAVDDDLVACESYRLNHPETRVRNETTNDFLLLLKEWQKLC-------KKYVEQ 295
Query: 424 QLYSFNDDGESEEDDDNGNVEDESEDDSEIFEVEKILKICYGDPKEIKKRGLYLKVRWRN 483
+ DG +E ++ + D+S D +E EV K++ IC+GDP I+ L+ KVRW+
Sbjct: 296 SEVKDHADGLTETINE---IPDDSVDPTEELEVWKLVDICFGDPNGIENHCLHFKVRWKG 352
Query: 484 YGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRN 543
YG ++DTWEPI+GL NC E I++FV G K KILPLPGDVDV+CGGPPCQG+SG+NR R
Sbjct: 353 YGRNDDTWEPIDGLGNCNEAIRDFVIEGHKRKILPLPGDVDVVCGGPPCQGISGYNRNRE 412
Query: 544 KDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVR 603
D E+NK++I FMD++ FLKPK+V MENV+DI+KFA L RYAL+RL+ M YQ +
Sbjct: 413 FDAQFKCEENKEIIFFMDVMQFLKPKYVYMENVLDILKFADATLARYALSRLVAMRYQAK 472
Query: 604 MGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQ 663
+G+MAAG YG+PQFRMRVFL G P EKLPP+ LPTH+ + + P FERN V + +G
Sbjct: 473 LGIMAAGCYGVPQFRMRVFLLGCHPEEKLPPFPLPTHEAIRKNGCPLAFERNLVGWSDGT 532
Query: 664 QAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQCFIR 707
+LA+ ++L+D +SDLP V N ESRDE+PY ++P+TEFQ +IR
Sbjct: 533 TVQLAKPIVLEDILSDLPEVGNEESRDEMPYVKDPQTEFQRYIR 576
>gi|18542936|gb|AAL75761.1| Putative DNA cytosine methyltransferase MET2a [Oryza sativa
Japonica Group]
Length = 719
Score = 571 bits (1471), Expect = e-160, Method: Compositional matrix adjust.
Identities = 308/597 (51%), Positives = 376/597 (62%), Gaps = 72/597 (12%)
Query: 120 PVRGEHDDDDEPEARFLGDPVPDGEARQRWPKRYEVKKQKRRNQKDDDEEEIIQAKCHYM 179
P R H D + + F+GDP P EAR +WP+RY+ RR DEEE I+A+CHY
Sbjct: 110 PSRVRHGSDGDHDPEFVGDPFPAKEARDKWPQRYQRNAATRR----PDEEEDIKARCHYS 165
Query: 180 WAEVDGHITYDLFDDAHVKAESGEEDYICKIVEMFEAVDGTPYFTAQWYYRARDTVIES- 238
A+VDG + Y L DD +VKAE + DYI +I E FE D YFT +W++RA DTVI S
Sbjct: 166 SAKVDGTL-YCLHDDVYVKAEEDKADYIGRITEFFEGTDHCHYFTCRWFFRAEDTVISSI 224
Query: 239 ---NA--HLIDQRRVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLAIPHCDYYCDM 293
NA D +RVF SE +NDN L+C++ K+ I + N++ EAK + CD Y DM
Sbjct: 225 MMENADDEKHDLKRVFLSEEKNDNVLDCIISKVKIVYIDPNMESEAKARRLADCDLYYDM 284
Query: 294 MYLLPYSTFFSLPPENKRVSSETSSTISSDVDANECEVGEPQKMDVKLLDLYSGCGAMST 353
Y + YSTF ++P SE SS VG+ LLDLYSGCG MST
Sbjct: 285 SYTVAYSTFANIPLGKVVSDSEASS------------VGK-----ATLLDLYSGCGGMST 327
Query: 354 GLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWEKLCISF 413
GLCLGA LAGLNL TRWAVD N +AC+SLK NHP TEVRNE A++FL LL+ W LC +
Sbjct: 328 GLCLGAALAGLNLETRWAVDFNSFACESLKYNHPRTEVRNEKADEFLALLKGWHSLCDEY 387
Query: 414 SLIARKDPQQQLYSFNDDGESEEDDDNGNVEDESEDDSEIFEVEKILKICYGDPKEIKKR 473
+KD +S E+EEDDD +DE F VEK+ ICYG ++
Sbjct: 388 ---VKKDID---FSSAGASENEEDDDEPLEKDE-------FVVEKLAGICYGGSG--RED 432
Query: 474 GLYLKVRWRNYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQ 533
GLY KV+W+ YG EDTWEPIE L +C KIKEFV G++ KILPLPGDVDVICGGPPCQ
Sbjct: 433 GLYFKVQWKGYGREEDTWEPIENLRDCPLKIKEFVQEGYRRKILPLPGDVDVICGGPPCQ 492
Query: 534 GVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALA 593
G+SGFNRFRN+ PL DEKNKQ++ FMDIV +LKPK+VLMENVVDI+KFA G LGRYAL+
Sbjct: 493 GISGFNRFRNRKEPLKDEKNKQMVTFMDIVAYLKPKYVLMENVVDILKFADGYLGRYALS 552
Query: 594 RLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFE 653
RL+ M YQ R+GMM AG YGLPQFRMRVFLWGA PT LP Y LPTH+VV+RG P F
Sbjct: 553 RLVAMKYQARLGMMVAGCYGLPQFRMRVFLWGALPTMVLPKYPLPTHNVVVRGGAPNAF- 611
Query: 654 RNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQCFIRLRK 710
SV+N++ + + Y P+TEFQ +IRL +
Sbjct: 612 ----------------------------SVNNHQPNEVMEYGSSPKTEFQRYIRLSR 640
>gi|2766715|gb|AAB95486.1| chromomethylase [Arabidopsis arenosa]
gi|2865435|gb|AAC02671.1| chromomethylase [Arabidopsis arenosa]
Length = 744
Score = 569 bits (1466), Expect = e-159, Method: Compositional matrix adjust.
Identities = 300/586 (51%), Positives = 397/586 (67%), Gaps = 14/586 (2%)
Query: 130 EPEARFL--GDPVPDGEARQRWPKRYEVKKQK-RRNQKDDDEEEIIQAKCHYMWAEVDGH 186
EPE G PV E+ RWP RY KK K K D +E+I AK HY A VDG
Sbjct: 4 EPEGDLCRAGKPVSVVESMIRWPHRYPSKKTKLEAATKGDKKEKIKLAKRHYEQALVDG- 62
Query: 187 ITYDLFDDAHVKAESGEEDYICKIVEMFEAVDGTPYFTAQWYYRARDTVIESNAHLIDQR 246
+ +L DD +V +G+ ++I K++EMFEA DG PY +W+YR DT+IE A L+ ++
Sbjct: 63 VLINLNDDVYVTHATGKLNFIGKVIEMFEADDGVPYCRIRWFYRPDDTLIERFAELVQKK 122
Query: 247 RVFFSEIQNDNPLECLVKKLNIARVPL-NIDLEAKKLAIPHCDYYCDMMYLLPYSTFFSL 305
RVF S +++DNPL C+ K+NIA+VPL I ++ IP CDYY DM Y +PY +L
Sbjct: 123 RVFLSNVEDDNPLTCIYSKVNIAKVPLPKITSRIEQRVIPPCDYYYDMKYEVPY---LNL 179
Query: 306 PPENKRVSSETSSTISSDVDANECEVGEPQKMDVKLLDLYSGCGAMSTGLCLGANLAGLN 365
+ ++ ++ + S + E K + LLDLYSGCGAMSTG C+GA++AG+
Sbjct: 180 TSADDDSAASSTLSSDSASNCFETL----HKDEKFLLDLYSGCGAMSTGFCMGASIAGVK 235
Query: 366 LVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWEKLCISFSLIARKDPQQQL 425
L+T+W+VDIN++AC S + NHPETEVRNE+AEDFL LL+EW++LC FSLI+ +P + +
Sbjct: 236 LITKWSVDINKFACDSFRHNHPETEVRNEAAEDFLILLKEWKRLCERFSLISSTEPMESI 295
Query: 426 YSFNDDGESEEDDDNGNVEDESEDDSEIFEVEKILKICYGDPKEIKKRGLYLKVRWRNYG 485
S +D ES+E+DD + E + FEVEK + I +GDPK ++ L+LKVRW+ Y
Sbjct: 296 -SELEDEESDENDDIDEASTDMELSAGEFEVEKFVGIVFGDPKGTGEKTLHLKVRWKGYS 354
Query: 486 PSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKD 545
P DTWEP GL NC EK+KE+VT GFKS +LPLPG V +CGGPPCQG+SG+NRFRNK
Sbjct: 355 PKYDTWEPYSGLGNCKEKLKEYVTDGFKSHLLPLPGTVYSVCGGPPCQGISGYNRFRNKQ 414
Query: 546 NPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMG 605
PL D+KN+QL+VF+DI+DFLKP +VLMENVVD+++F+KG L R+A+A + MNYQ R+G
Sbjct: 415 APLEDKKNQQLLVFLDIIDFLKPSYVLMENVVDLLRFSKGYLARHAVASFVAMNYQTRLG 474
Query: 606 MMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQA 665
MM AG+YGLPQ R RVFLW AQPTEKLPPY LPTH+V + P EFE V + +
Sbjct: 475 MMTAGSYGLPQVRNRVFLWAAQPTEKLPPYPLPTHEVEKKYNTPKEFEDLQVGLIQKELL 534
Query: 666 ELARKLLLQDAISDLPSVDNYESRDEIPY-DREPETEFQCFIRLRK 710
+L L L DAISDLP V N E+ D Y D P+T+F+ FI L++
Sbjct: 535 QLDNALTLADAISDLPPVTNSEANDVRNYNDAAPKTDFENFISLKR 580
>gi|224071435|ref|XP_002303458.1| DNA methyltransferase [Populus trichocarpa]
gi|222840890|gb|EEE78437.1| DNA methyltransferase [Populus trichocarpa]
Length = 729
Score = 565 bits (1457), Expect = e-158, Method: Compositional matrix adjust.
Identities = 284/559 (50%), Positives = 388/559 (69%), Gaps = 26/559 (4%)
Query: 165 DDDEEEII-QAKCHYMWAEVDGHITYDLFDDAHVKAESGEEDYICKIVEMFEAVDGTPYF 223
DDDE++++ +CHY A ++G I +L D +VK E G +++I I+E F+ D YF
Sbjct: 4 DDDEDKVVWNVECHYTQANIEGRII-NLGDCVYVKGE-GAKNHIGSILEFFKTTDREDYF 61
Query: 224 TAQWYYRARDTVIESNAHLIDQRRVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLA 283
QW+YRA DTV++ A D +R+F+S + NDNP++C++ K+ + ++ + L K +
Sbjct: 62 RVQWFYRAEDTVMKEAADFHDNKRLFYSTVMNDNPIDCIISKVTVVQISPRVHL--KFHS 119
Query: 284 IPHCDYYCDMMYLLPYSTFFSLPPENKRVSSETSSTISSDVDANECEVGEPQKMDVKLLD 343
P D+Y DM Y + YSTF +L S+ + IS + N G K + LLD
Sbjct: 120 TPASDFYFDMEYCVDYSTFRTLLTGKNLNSTPGTDDISME---NMSTCGS-YKAKLTLLD 175
Query: 344 LYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLL 403
L+SGCG MSTGLCLGA ++ ++LVTRWA+D +E ACQSLKLNHPET VRNE+AEDFL LL
Sbjct: 176 LFSGCGGMSTGLCLGAKVSCVDLVTRWALDSDESACQSLKLNHPETHVRNEAAEDFLELL 235
Query: 404 REWEKLCISFSL--IARKDPQQQLYSFNDDGESEEDDDNGNVEDESEDDSEIFEVEKILK 461
+EW+KLC +++ + R + + S S+++ ++ N +D + + +EV +++
Sbjct: 236 KEWQKLCKRYAVNDVGRTHKSRSMAS----SMSKQNKNSSNDDDIASGE---YEVARLVD 288
Query: 462 ICYGDPKEIKKRGLYLKVRWRNYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPG 521
ICYG + KRGL KV W+ Y SED+WEPIEGLSNC I++FV GFKSKILPLPG
Sbjct: 289 ICYGKTDKRGKRGLKFKVHWKGYSTSEDSWEPIEGLSNCEHSIRDFVREGFKSKILPLPG 348
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
D DVICGGPPCQG+SG+NR+RN D+PLADE+N Q++VFMDIV FLKPK+VLMENVVDI++
Sbjct: 349 DADVICGGPPCQGISGYNRYRNVDSPLADERNIQIVVFMDIVQFLKPKYVLMENVVDILR 408
Query: 582 FAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTE-------KLPP 634
F K RYAL+RL+ M YQ R+G +AAG YGLPQFR+RVFLWGA P E KLP
Sbjct: 409 FDKASFARYALSRLVHMKYQARLGTVAAGCYGLPQFRLRVFLWGAHPKEASFIIHGKLPQ 468
Query: 635 YALPTHDVVLRGVIPTEFERNTVAYDEGQ-QAELARKLLLQDAISDLPSVDNYESRDEIP 693
+ LP+HDV++R P EFERNTVAYDE Q + +L + +L+DAISDLP V ++E+R+E+
Sbjct: 469 FPLPSHDVIVRYWPPPEFERNTVAYDEDQPRDDLEKATVLRDAISDLPDVTSHETREEMA 528
Query: 694 YDREPETEFQCFIRLRKDG 712
YD+ PET+FQ FIR ++G
Sbjct: 529 YDKPPETDFQQFIRSTRNG 547
>gi|226088552|dbj|BAH37021.1| chromomethylase OsMET2c [Oryza sativa Japonica Group]
Length = 749
Score = 564 bits (1454), Expect = e-158, Method: Compositional matrix adjust.
Identities = 283/585 (48%), Positives = 386/585 (65%), Gaps = 26/585 (4%)
Query: 136 LGDPVPDGEARQRWPKRYEV-----KKQKRRNQKD--DDEEEIIQAKCHYMWAEVDGHIT 188
+GD VPD EAR++WP RYE+ KK KR + + + + ++ KCHY+ A+V + T
Sbjct: 1 VGDAVPDDEARKQWPHRYEINDQIMKKDKRTSSQTFANAGKAVLDVKCHYLQAKVSRY-T 59
Query: 189 YDLFDDAHVKAESGEEDYICKIVEMFEAVDGTPYFTAQWYYRARDTVIESNAHLIDQRRV 248
+ + + A VK G+ +YI +++E FE G YF QW++ A DTVI A D RR+
Sbjct: 60 FCIGECAFVKGPEGKPNYIGRLLEFFETKTGECYFRVQWFFTAEDTVIGEQAQSHDPRRL 119
Query: 249 FFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLAIPHCDYYCDMMYLLPYSTFFSLPPE 308
F+S++ +DN L+C+V K+ I +VP ++D ++K ++P DYY DM Y + YSTF ++ E
Sbjct: 120 FYSDLTDDNLLDCIVSKVTIVQVPPSVDGKSK--SVPSSDYYYDMKYSIDYSTFSTIEME 177
Query: 309 NKRVSSETSSTISSDVDANECEVGEP------QKMDVKLLDLYSGCGAMSTGLCLGANLA 362
+ ++ T + + +V + +KM++ LLDLY GCG MSTGLCLGA
Sbjct: 178 DTDDLMQSCYTSRINDKMKKIDVNKKHKSPVLEKMELSLLDLYCGCGGMSTGLCLGARGG 237
Query: 363 GLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWEKLCISFSLIARKDPQ 422
G+NL RWA+D +E AC+S + NHPET VRNE+ +DFL LL+EWEKLC ++ +R
Sbjct: 238 GVNLSARWAIDDDEIACESFRNNHPETRVRNETTDDFLELLKEWEKLCKTYVKHSRTKAC 297
Query: 423 QQLYSFNDDGESEEDDDNGNVEDESEDDSEIFEVEKILKICYGDPKEIKKRGLYLKVRWR 482
D +E N D S E FEV K++ IC+GDP ++ K GLY KVRW+
Sbjct: 298 V-------DSTTES---NNETPDCSTVPPEEFEVWKLVDICFGDPNKVSKHGLYFKVRWK 347
Query: 483 NYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFR 542
YGP DTWEP+EGL NC E I++FV G + +ILP PGDVDV+CGGPPCQG+SG+NR R
Sbjct: 348 GYGPHHDTWEPVEGLRNCKEAIRDFVIEGHRQRILPRPGDVDVVCGGPPCQGISGYNRNR 407
Query: 543 NKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQV 602
+ P EKNKQ+IVFMD+V FLKPK+V MENV+DI+KFA L RYAL+RL+ M+YQ
Sbjct: 408 EFEAPFKCEKNKQIIVFMDVVQFLKPKYVYMENVLDILKFADATLARYALSRLVAMHYQA 467
Query: 603 RMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEG 662
R+G+MAAG YGLPQFRMRVFL G EKLPP+ LPTH+ +++ P FERN V +
Sbjct: 468 RLGIMAAGCYGLPQFRMRVFLLGCHSKEKLPPFPLPTHEAIVKNGCPLAFERNLVGWPND 527
Query: 663 QQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQCFIR 707
+LAR ++L+D +SDLP V N ESRDE+ Y + P+TEFQ +IR
Sbjct: 528 TPMQLARPIVLEDILSDLPEVANGESRDEMLYVKGPQTEFQRYIR 572
>gi|218196311|gb|EEC78738.1| hypothetical protein OsI_18945 [Oryza sativa Indica Group]
Length = 1325
Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust.
Identities = 276/601 (45%), Positives = 372/601 (61%), Gaps = 38/601 (6%)
Query: 129 DEPEARFLGDPVPDGEARQRWPKRYEVKKQKRRNQKDDDEEEIIQAKCHYMWAEVDGHIT 188
D+ F+GD VPD EAR++WP RYE+ Q + D+ Q + G
Sbjct: 538 DDGSCFFVGDAVPDDEARKQWPHRYEINDQIMKK----DKRTSSQTFAKLVTVSFCGVFM 593
Query: 189 YDLFDDAHVKAESGEEDYICKIVEMFEAVDGTPYFTAQWYYRARDTVIESNAHLIDQRRV 248
Y + G+ +YI +++E FE G YF QW++ A DTVI A D RR+
Sbjct: 594 YVYLQMLDFRGPEGKPNYIGRLLEFFETKTGECYFRVQWFFTAEDTVIGEQAQSHDPRRL 653
Query: 249 FFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLAIPHCDYYCDMMYLLPYSTFFSLPPE 308
F+S++ +DN L+C+V K+ I +VP ++D ++K ++P DYY DM Y + YSTF ++ E
Sbjct: 654 FYSDLTDDNLLDCIVSKVTIVQVPPSVDGKSK--SVPSSDYYYDMKYSIDYSTFSTIEME 711
Query: 309 NKRVSSETSSTISSDVDANECEVGEP------QKMDVKLLDLYSGCGAMSTGLCLGANLA 362
+ ++ T + + +V + +KM++ LLDLY GCG MSTGLCLGA
Sbjct: 712 DTDDLMQSCYTSRINDKMKKIDVNKKHKSPVLEKMELSLLDLYCGCGGMSTGLCLGARGG 771
Query: 363 GLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWEKLCISFSLIARKDPQ 422
G+NL RWA+D +E AC+S + NHPET VRNE+ +DFL LL+EWEKLC ++ +R
Sbjct: 772 GVNLSARWAIDDDEIACESFRNNHPETRVRNETTDDFLELLKEWEKLCKTYVKHSRTKAC 831
Query: 423 QQLYSFNDDGESEEDDDNGNVEDESEDDSEIFEVEKILKICYGDPKEIKKRGLYLKVRWR 482
D +E N D S E FEV K++ IC+GDP ++ K GLY KVRW+
Sbjct: 832 V-------DSTTES---NNETPDCSTVPPEEFEVWKLVDICFGDPNKVSKHGLYFKVRWK 881
Query: 483 NYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLP----------------GDVDVI 526
YGP DTWEP+EGL NC E I++FV G + +ILP P GDVDV+
Sbjct: 882 GYGPHHDTWEPVEGLRNCKEAIRDFVIEGHRQRILPRPRRNIAVFLLRPSKFPLGDVDVV 941
Query: 527 CGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGL 586
CGGPPCQG+SG+NR R + P EKNKQ+IVFMD+V FLKPK+V MENV+DI+KFA
Sbjct: 942 CGGPPCQGISGYNRNREFEAPFKCEKNKQIIVFMDVVQFLKPKYVYMENVLDILKFADAT 1001
Query: 587 LGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRG 646
L RYAL+RL+ M+YQ R+G+MAAG YGLPQFRMRVFL G EKLPP+ LPTH+ +++
Sbjct: 1002 LARYALSRLVAMHYQARLGIMAAGCYGLPQFRMRVFLLGCHSKEKLPPFPLPTHEAIVKN 1061
Query: 647 VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQCFI 706
P FERN V + +LAR ++L+D +SDLP V N ESRDE+ Y + P+TEFQ +I
Sbjct: 1062 GCPLAFERNLVGWPNDTPMQLARPIVLEDILSDLPEVANGESRDEMLYVKGPQTEFQRYI 1121
Query: 707 R 707
R
Sbjct: 1122 R 1122
>gi|2865428|gb|AAC02667.1| chromomethylase [Arabidopsis thaliana]
Length = 560
Score = 541 bits (1394), Expect = e-151, Method: Compositional matrix adjust.
Identities = 281/548 (51%), Positives = 368/548 (67%), Gaps = 23/548 (4%)
Query: 119 LPVRGEHDDDDEPEAR--FLGDPVPDGEARQRWPKRYEVKKQK---------RRNQKDDD 167
+ R + EPE+ F G P+ E+ RWP RY+ KK K + K +D
Sbjct: 1 MAARNKQKKRAEPESDLCFAGKPMSVVESTIRWPHRYQSKKTKLQAPTKKPANKGGKKED 60
Query: 168 EEEIIQAKCHYMWAEVDGHITYDLFDDAHVKAESGEEDYICKIVEMFEAVDGTPYFTAQW 227
EE I QAKCH+ A VDG + +L DD +V G+ +I K++E+FEA DG PY +W
Sbjct: 61 EEIIKQAKCHFDKALVDG-VLINLNDDVYVTGLPGKLKFIAKVIELFEADDGVPYCRFRW 119
Query: 228 YYRARDTVIESNAHLIDQRRVFFSEIQNDNPLECLVKKLNIARVPL-NIDLEAKKLAIPH 286
YYR DT+IE +HL+ +RVF S +NDNPL C+ K+NIA+VPL I ++ IP
Sbjct: 120 YYRPEDTLIERFSHLVQPKRVFLSNDENDNPLTCIWSKVNIAKVPLPKITSRIEQRVIPP 179
Query: 287 CDYYCDMMYLLPYSTFFSLPPENKRVSSETSSTISSDVDANECEVGEPQKMDVK-LLDLY 345
CDYY DM Y +PY F S + + S SS + E D K LLDLY
Sbjct: 180 CDYYYDMKYEVPYLNFTS--------TDDGSDASSSLSSDSALNCFENLHKDEKFLLDLY 231
Query: 346 SGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLRE 405
SGCGAMSTG C+GA+++G+ L+T+W+VDIN++AC SLKLNHPETEVRNE+AEDFL LL+E
Sbjct: 232 SGCGAMSTGFCMGASISGVKLITKWSVDINKFACDSLKLNHPETEVRNEAAEDFLALLKE 291
Query: 406 WEKLCISFSLIARKDPQQQLYSFNDDGESEEDDDNGNVEDESEDDSEIFEVEKILKICYG 465
W++LC FSL++ +P + + S +D E EE+DD +E + FEVEK L I +G
Sbjct: 292 WKRLCEKFSLVSSTEPVESI-SELEDEEVEENDDIDEASTGAELEPGEFEVEKFLGIMFG 350
Query: 466 DPKEIKKRGLYLKVRWRNYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDVDV 525
DP+ ++ L L VRW+ Y S DTWEP GL NC EK+KE+V GFKS +LPLPG V
Sbjct: 351 DPQGTGEKTLQLMVRWKGYNSSYDTWEPYSGLGNCKEKLKEYVIDGFKSHLLPLPGTVYT 410
Query: 526 ICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKG 585
+CGGPPCQG+SG+NR+RN + PL D+KN+QL+VF+DI+DFLKP +VLMENVVD+++F+KG
Sbjct: 411 VCGGPPCQGISGYNRYRNNEAPLEDQKNQQLLVFLDIIDFLKPNYVLMENVVDLLRFSKG 470
Query: 586 LLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLR 645
L R+A+A + MNYQ R+GMMAAG+YGLPQ R RVFLW AQP+EKLPPY LPTH+V +
Sbjct: 471 FLARHAVASFVAMNYQTRLGMMAAGSYGLPQLRNRVFLWAAQPSEKLPPYPLPTHEVAKK 530
Query: 646 GVIPTEFE 653
P EF+
Sbjct: 531 FNTPKEFK 538
>gi|261414310|gb|ACX83573.1| DNA chromomethylase [Hieracium piloselloides]
Length = 607
Score = 540 bits (1391), Expect = e-150, Method: Compositional matrix adjust.
Identities = 262/400 (65%), Positives = 319/400 (79%), Gaps = 11/400 (2%)
Query: 316 TSSTISSDVDANECEVGEPQKMD-----VKLLDLYSGCGAMSTGLCLGANLAGLNLVTRW 370
+ STISS+ N E Q + +++LDLYSGCGAMSTGLCLGAN+A +NLVTRW
Sbjct: 9 SDSTISSESGVNGAVNEESQSQNNKSSEMRMLDLYSGCGAMSTGLCLGANMADVNLVTRW 68
Query: 371 AVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWEKLCISFSLIARKDPQQQLYSFND 430
AVD+N+YAC+SLKLNHPETE RNESAEDFL LL+EWEKLC S+ L+ D QQ+
Sbjct: 69 AVDLNKYACESLKLNHPETEARNESAEDFLQLLKEWEKLCQSYGLVGGGDSQQK------ 122
Query: 431 DGESEEDDDNGNVEDESEDDSEIFEVEKILKICYGDPKEIKKRGLYLKVRWRNYGPSEDT 490
+ + ++D +D D+ EIFEVE+IL +CYGDPKE+KK GLYLK+RW+ YG EDT
Sbjct: 123 EEPATIEEDEEEEDDVEVDNEEIFEVEQILSVCYGDPKEMKKPGLYLKIRWKGYGSEEDT 182
Query: 491 WEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLAD 550
WEPIEGLS+C +KIKEFV +GFKSK+LPLPGDVDVI GGPPCQG+SGFNRFRNKD PL D
Sbjct: 183 WEPIEGLSDCHDKIKEFVVNGFKSKLLPLPGDVDVITGGPPCQGISGFNRFRNKDKPLED 242
Query: 551 EKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAG 610
EKNKQL+V+MDIV++LKP+F LMENVVDI++FAKG LGRYAL RL+ MNY R+G+M AG
Sbjct: 243 EKNKQLVVYMDIVEYLKPRFCLMENVVDIIRFAKGFLGRYALGRLVSMNYIARVGLMVAG 302
Query: 611 AYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARK 670
+YGLPQFR R+F+WGA+P+EKLP Y LPTH+VV RGV P EFE NTV +D+G + EL ++
Sbjct: 303 SYGLPQFRRRMFMWGARPSEKLPQYPLPTHNVVTRGVSPLEFESNTVVHDDGAKVELEKE 362
Query: 671 LLLQDAISDLPSVDNYESRDEIPYDREPETEFQCFIRLRK 710
L L DAISDLP V N E+RDE+PY +P+TEFQ FI L+K
Sbjct: 363 LYLGDAISDLPPVPNDEARDEMPYGEKPKTEFQKFISLKK 402
>gi|242087283|ref|XP_002439474.1| hypothetical protein SORBIDRAFT_09g007390 [Sorghum bicolor]
gi|241944759|gb|EES17904.1| hypothetical protein SORBIDRAFT_09g007390 [Sorghum bicolor]
Length = 1441
Score = 540 bits (1391), Expect = e-150, Method: Compositional matrix adjust.
Identities = 283/604 (46%), Positives = 383/604 (63%), Gaps = 50/604 (8%)
Query: 135 FLGDPVPDGEARQRWPKRYE-----VKKQKRRNQK--DDDEEEIIQAKCHYMWAEVDGHI 187
F+GD VPD EA++RWP RY+ +KK KR N + + + ++ KCHY+ A + G
Sbjct: 644 FVGDAVPDEEAQKRWPHRYQNNHCLLKKDKRSNTQTVSNVGKAVLDVKCHYLEASICGS- 702
Query: 188 TYDLFDDAHVKAESGEEDYICKIVEMFEAVDGTPYFTAQWYYRARDTVIESNAHLIDQRR 247
T + D A +K G+ YI +++E FE YFT QW++RA DTV+E A D RR
Sbjct: 703 TLCIGDCAFIKGLEGKPHYIGRLLEFFETTADEYYFTVQWFFRAEDTVMEDQAQSHDPRR 762
Query: 248 VFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLAIPHCDYYCDMMYLLPYSTFFSLP- 306
+F+S++++DN L+C+V K+ I +P++ L K IP YY DM Y L YSTF ++
Sbjct: 763 LFYSDLKDDNLLDCIVSKVTI--MPVSPSLNEKPRLIPSFHYYYDMKYSLDYSTFSTMEM 820
Query: 307 --PENKRVSSETSSTISSDVDANECEVGEPQKM-DVKLLDLYSGCGAMSTGLCLGANLAG 363
P + S TSS +D E + +M ++ LLDLY GCG MSTGLCLGA G
Sbjct: 821 GDPNDTLHSHYTSSNNVKRIDFTEKQKSPTSEMRELSLLDLYCGCGGMSTGLCLGARGGG 880
Query: 364 LNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWEKLCISFSLIARKDPQQ 423
+NLV RWAVD +E AC++ +LNHPET VRNE+ +DFL LL+EW+KLC ++ K Q
Sbjct: 881 VNLVARWAVDGDEVACETFRLNHPETRVRNETTDDFLELLKEWKKLCKTYVKPCSKVKSQ 940
Query: 424 QLYSFNDDGESEEDDDNGNVEDESEDDSEIFEVEKILKICYGDPKEIKKRGLYLKVRWRN 483
NG D S +E FEV K++ IC+GDP ++KR LY KVRW+
Sbjct: 941 S--------NVPTQSSNGT-PDCSTFSTEEFEVWKLVDICFGDPNGVRKRALYFKVRWKG 991
Query: 484 YGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLP--------------------GDV 523
YGP++DTWEP+EGL NC + I++FV G KILPLP GDV
Sbjct: 992 YGPNDDTWEPMEGLKNCKDAIRDFVIEGHNKKILPLPAWPLPPLVGWMAACLGWLWLGDV 1051
Query: 524 DVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFA 583
DVICGGPPCQG+SG+NR R D P E+NKQ+IVFMD++ FLKPK++ MENV+DI+KFA
Sbjct: 1052 DVICGGPPCQGISGYNRNREFDAPFNCERNKQIIVFMDVMQFLKPKYIYMENVLDILKFA 1111
Query: 584 KGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVV 643
L RYAL+RL+ M+YQ ++G+MAAG YGLPQFRMRVFL KLPP+ LPTH+ +
Sbjct: 1112 DATLARYALSRLVSMHYQAKLGVMAAGCYGLPQFRMRVFL-------KLPPFPLPTHEAI 1164
Query: 644 LRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQ 703
++ P FERN V + + +L + ++L+DA+SDLP V+N E R+E+ Y + P+TEFQ
Sbjct: 1165 VKNGCPLAFERNLVGWPDSMPMQLEKPIVLEDALSDLPEVENGEKREEMLYMKGPQTEFQ 1224
Query: 704 CFIR 707
+IR
Sbjct: 1225 RYIR 1228
>gi|2865425|gb|AAC02665.1| chromomethylase [Arabidopsis thaliana]
gi|2865430|gb|AAC02668.1| chromomethylase [Arabidopsis thaliana]
Length = 560
Score = 540 bits (1390), Expect = e-150, Method: Compositional matrix adjust.
Identities = 283/567 (49%), Positives = 373/567 (65%), Gaps = 21/567 (3%)
Query: 119 LPVRGEHDDDDEPEAR--FLGDPVPDGEARQRWPKRYEVKKQK---------RRNQKDDD 167
+ R + EPE+ F G P+ E+ RWP RY+ KK K + K +D
Sbjct: 1 MAARNKQKKRAEPESDLCFAGKPMSVVESTIRWPHRYQSKKTKLQAPTKKPANKGGKKED 60
Query: 168 EEEIIQAKCHYMWAEVDGHITYDLFDDAHVKAESGEEDYICKIVEMFEAVDGTPYFTAQW 227
EE I QAKCH+ A VDG + +L DD +V G+ +I K++E+FEA DG PY +W
Sbjct: 61 EEIIKQAKCHFDKALVDG-VLINLNDDVYVTGLPGKLKFIAKVIELFEADDGVPYCRFRW 119
Query: 228 YYRARDTVIESNAHLIDQRRVFFSEIQNDNPLECLVKKLNIARVPL-NIDLEAKKLAIPH 286
YYR DT+IE +HL+ +RVF S +NDNPL C+ K+NIA+VPL I ++ IP
Sbjct: 120 YYRPEDTLIERFSHLVQPKRVFLSNDENDNPLTCIWSKVNIAKVPLPKITSRIEQRVIPP 179
Query: 287 CDYYCDMMYLLPYSTFFSLPPENKRVSSETSSTISSDVDANECEVGEPQKMDVKLLDLYS 346
CDYY DM Y +PY F +S+ S A C K + LLDLYS
Sbjct: 180 CDYYYDMKYEVPYLNF------TSADDGSDASSSLSSDSALNC-FENLHKDEKFLLDLYS 232
Query: 347 GCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREW 406
GCGAMSTG C+GA+++G+ L+T+W+VDIN++AC SLKLNHPETEVRNE+AEDFL LL+EW
Sbjct: 233 GCGAMSTGFCMGASISGVKLITKWSVDINKFACDSLKLNHPETEVRNEAAEDFLALLKEW 292
Query: 407 EKLCISFSLIARKDPQQQLYSFNDDGESEEDDDNGNVEDESEDDSEIFEVEKILKICYGD 466
++LC FSL++ +P + + S +D E EE+DD +E + FEVEK L I +GD
Sbjct: 293 KRLCEKFSLVSSTEPVESI-SELEDEEVEENDDIDEASTGAELEPGEFEVEKFLGIMFGD 351
Query: 467 PKEIKKRGLYLKVRWRNYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDVDVI 526
P+ ++ L L VRW+ Y S DTWEP GL NC EK+KE+V GFKS +LPLPG V +
Sbjct: 352 PQGTGEKTLQLMVRWKGYNSSYDTWEPYSGLGNCKEKLKEYVIDGFKSHLLPLPGTVYTV 411
Query: 527 CGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGL 586
CGGPPCQG+SG+NR+RN + PL D+KN+QL+VF+DI+DFLKP +VLMENVVD+++F+KG
Sbjct: 412 CGGPPCQGISGYNRYRNNEAPLEDQKNQQLLVFLDIIDFLKPNYVLMENVVDLLRFSKGF 471
Query: 587 LGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRG 646
L R+A+A + MNYQ R+GMMAAG+YGLPQ R RVFLW AQP+EKLPPY LPTH+V +
Sbjct: 472 LARHAVASFVAMNYQTRLGMMAAGSYGLPQLRNRVFLWAAQPSEKLPPYPLPTHEVAKKF 531
Query: 647 VIPTEFERNTVAYDEGQQAELARKLLL 673
P EF+ V + + +L L L
Sbjct: 532 NTPKEFKDLQVGRIQMEFLKLDNALTL 558
>gi|222630668|gb|EEE62800.1| hypothetical protein OsJ_17603 [Oryza sativa Japonica Group]
Length = 1190
Score = 522 bits (1344), Expect = e-145, Method: Compositional matrix adjust.
Identities = 275/645 (42%), Positives = 376/645 (58%), Gaps = 80/645 (12%)
Query: 127 DDDEPEARFLGDPVPDGEARQRWPKRYEVKKQKRRNQKDDDEEEIIQAKCHYMWAEVDGH 186
+ D+ F+GD VPD EAR++WP RYE+ Q + K + + + V +
Sbjct: 359 ETDDGSCFFVGDAVPDDEARKQWPHRYEINDQIMKKDKRTSSQTFAKL-VTVSFCVVFMY 417
Query: 187 ITYDLFDDAHVKAESGEEDYICKIVEMFEAVDGTPYFTAQWYYRARDTVIESNAHLIDQR 246
+ + D + G+ +YI +++E FE G YF QW++ A DTVI A D R
Sbjct: 418 VYLQMLD---FRGPEGKPNYIGRLLEFFETKTGECYFRVQWFFTAEDTVIGEQAQSHDPR 474
Query: 247 RVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLAIPHCDYYCDMMYLLPYSTFFSLP 306
R+F+S++ +DN L+C+V K+ I +VP ++D ++K ++P DYY DM Y + YSTF ++
Sbjct: 475 RLFYSDLTDDNLLDCIVSKVTIVQVPPSVDGKSK--SVPSSDYYYDMKYSIDYSTFSTIE 532
Query: 307 PENKRVSSETSSTISSDVDANECEVGEP------QKMDVKLLDLYSGCGAMSTGLCLGAN 360
E+ ++ T + + +V + +KM++ LLDLY GCG MSTGLCLGA
Sbjct: 533 MEDTDDLMQSCYTSRINDKMKKIDVNKKHKSPVLEKMELSLLDLYCGCGGMSTGLCLGAR 592
Query: 361 LAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWEKLCISFSLIARKD 420
G+NL RWA+D +E AC+S + NHPET VRNE+ +DFL LL+EWEKLC ++ +R
Sbjct: 593 GGGVNLSARWAIDDDEIACESFRNNHPETRVRNETTDDFLELLKEWEKLCKTYVKHSRTK 652
Query: 421 PQQQLYSFNDDGESEEDDDNGNVEDESEDDSEIFEVEKILKICYGDPKEIKKRGLYLKVR 480
D +E N D S E FEV K++ IC+GDP ++ K GLY KVR
Sbjct: 653 ACV-------DSTTES---NNETPDCSTVPPEEFEVWKLVDICFGDPNKVSKHGLYFKVR 702
Query: 481 WRNYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKI------------------------ 516
W+ YGP DTWEP+EGL NC E I++FV G + +I
Sbjct: 703 WKGYGPHHDTWEPVEGLRNCKEAIRDFVIEGHRQRILPRPVRWKGYGPHHDTWEPVEGLR 762
Query: 517 ------------------LPLP----------------GDVDVICGGPPCQGVSGFNRFR 542
LP P GDVDV+CGGPPCQG+SG+NR R
Sbjct: 763 NCKEAIRDFVIEGHRQRILPRPRRNIAVFLLRPSKFPLGDVDVVCGGPPCQGISGYNRNR 822
Query: 543 NKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQV 602
+ P EKNKQ+IVFMD+V FLKPK+V MENV+DI+KFA L RYAL+RL+ M+YQ
Sbjct: 823 EFEAPFKCEKNKQIIVFMDVVQFLKPKYVYMENVLDILKFADATLARYALSRLVAMHYQA 882
Query: 603 RMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEG 662
R+G+MAAG YGLPQFRMRVFL G EKLPP+ LPTH+ +++ P FERN V +
Sbjct: 883 RLGIMAAGCYGLPQFRMRVFLLGCHSKEKLPPFPLPTHEAIVKNGCPLAFERNLVGWPND 942
Query: 663 QQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQCFIR 707
+LAR ++L+D +SDLP V N ESRDE+ Y + P+TEFQ +IR
Sbjct: 943 TPMQLARPIVLEDILSDLPEVANGESRDEMLYVKGPQTEFQRYIR 987
>gi|168034417|ref|XP_001769709.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679058|gb|EDQ65510.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 700
Score = 518 bits (1335), Expect = e-144, Method: Compositional matrix adjust.
Identities = 264/538 (49%), Positives = 365/538 (67%), Gaps = 32/538 (5%)
Query: 177 HYMWAEVDGHITYDLFDDAHVKAESGEED-YICKIVEMFEAVDGTPYFTAQWYYRARDTV 235
HY AEV+G + Y L D HV SG ED +I +I E +E D +P+F AQW++R+ DTV
Sbjct: 1 HYRQAEVEGKL-YKLGDCVHV--HSGLEDPFIGRITEFYEKEDKSPWFHAQWFFRSYDTV 57
Query: 236 IESNAHLIDQRRVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLAIPHCDYYCDMMY 295
S H D +++++SE+ ++N L +V K+++ R+ + + P CDYY D Y
Sbjct: 58 --SRNH--DPKKIYYSEVADENELHVIVGKVSVIRIASKDRSDRSPIKTPACDYYFDKGY 113
Query: 296 LLPYSTFFSLPPENKRVSSETSSTISSDVDANECEVGEPQKMDVKLLDLYSGCGAMSTGL 355
+ Y TF++LP + S+++ + +S D+N+ K D LLDLY GCGAMSTG+
Sbjct: 114 MFQYGTFYTLPKDLPGHGSKSTESDNSCSDSND-------KKDFYLLDLYCGCGAMSTGI 166
Query: 356 CLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWEKLCISFSL 415
CLG NLAG+NLVT+WAVD+NE+AC SLK NHPET VRNE+AED+L LL+EW+KLC + +
Sbjct: 167 CLGMNLAGINLVTKWAVDLNEFACMSLKYNHPETTVRNEAAEDYLQLLKEWKKLCEKYPV 226
Query: 416 IARKDPQQQLYSFNDDGESEEDDDNGNVEDESEDDSEIFEVEKILKICYGDPKEIKKRGL 475
G ++D + + + + + +EVE++L I + K + +
Sbjct: 227 ----------------GCVVQEDSEEDEDGDDDPAAGEYEVERLLGIRWVGEVSEKDKEV 270
Query: 476 YLKVRWRNYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGV 535
+VRW+ Y P +DTWEP L +C E++KEFV G + K+LPLPGD DVICGGPPCQG
Sbjct: 271 MEQVRWKGYAPEDDTWEPAASLDHCPERVKEFVLEGRRQKLLPLPGDCDVICGGPPCQGA 330
Query: 536 SGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARL 595
SGFNRFRN+ +PLAD +NKQ++V+MDIVDFL+P+F +MENVVDI+KF G+LGRYALAR
Sbjct: 331 SGFNRFRNRVDPLADPRNKQMVVYMDIVDFLRPRFFIMENVVDILKFCDGILGRYALARA 390
Query: 596 IQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERN 655
+ MNYQ ++G+M AG YG+PQFR R FLWGA E LPPY +PTH V++RG P ++ER
Sbjct: 391 VGMNYQSKVGIMVAGCYGMPQFRARCFLWGAASDEILPPYPMPTHKVIVRGGFPQKWERC 450
Query: 656 TVAYDEGQQAE-LARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQCFIRLRKDG 712
VAY+E +Q E L L+L+DA+SDLP+V N +S+D+I YD EP+ +FQ F+RL K G
Sbjct: 451 LVAYEENKQPEWLQLPLVLKDALSDLPAVGNDQSKDDISYDEEPQCDFQHFLRLPKKG 508
>gi|302818367|ref|XP_002990857.1| hypothetical protein SELMODRAFT_132507 [Selaginella moellendorffii]
gi|300141418|gb|EFJ08130.1| hypothetical protein SELMODRAFT_132507 [Selaginella moellendorffii]
Length = 933
Score = 517 bits (1331), Expect = e-143, Method: Compositional matrix adjust.
Identities = 272/620 (43%), Positives = 379/620 (61%), Gaps = 61/620 (9%)
Query: 132 EARFLGDPVPDGEARQRWPKRYEVKKQKRRNQKDDDEEEIIQAKC--HYMWAEVDGHITY 189
+A F+G P+P A+++WP RY D KC HY A VDG Y
Sbjct: 155 KAHFVGKPIPAARAKRQWPNRY------------DKSAGAGSQKCVEHYEEAVVDGK-HY 201
Query: 190 DLFDDAHVKAESGEEDYICKIVEMFEAVDGTPYFTAQWYYRARDTV-------------I 236
+ D ++ + + +Y+ K++E F+ + +F QW++R DTV +
Sbjct: 202 KVGDCVALELQGDDAEYLGKVLEFFKTANQENWFRVQWFFRFSDTVCLRLCGYPDCKCSL 261
Query: 237 ESNAHL----IDQRRVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLAIPHCDYYCD 292
++ L +D +RVF S+ ++DN +EC++KK+ ++ P+ +D +KK CDYY D
Sbjct: 262 QAIGDLDDVHLDNKRVFLSDDEDDNMIECIIKKVKVSYAPV-MDAFSKKKIKQSCDYYFD 320
Query: 293 MMYLLPYSTFFSLPPENKRV-SSETSSTISSDVDANECEVGEPQKMDVKLLDLYSGCGAM 351
M Y +STF+ +P N V S++ SS + K ++ LLDLY GCGAM
Sbjct: 321 MGYTGDFSTFYKVPSGNVFVFSTDALEDASSSFQTAVTRCSDTIKPELILLDLYCGCGAM 380
Query: 352 STGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWEKLCI 411
STGL +GA L G+NLVT+WAVD NE+AC S+K NHPETEVRNE AE FL LL+EW+KLC
Sbjct: 381 STGLSMGAALGGVNLVTKWAVDYNEHACNSMKYNHPETEVRNEDAECFLLLLKEWQKLCT 440
Query: 412 SFSLIARKDPQQQLYSFNDDGESEEDDDNGNVEDESEDDSEIFEVEKILKICYGD----- 466
+ + + +D+ + D N DE D +EV++++ I
Sbjct: 441 KY----------EGHVADDNSNASSPDSNTLGADEYAADE--YEVQQVVDIRMAGIQKPK 488
Query: 467 --------PKEIKKRGLYLKVRWRNYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILP 518
P++ KR L KVRW+ Y DTWEP++ L +C E+I++FV G + +ILP
Sbjct: 489 KPDTSSKMPEKPIKRRLEFKVRWKGYTSDHDTWEPVDHLDSCQERIRDFVLEGRRRRILP 548
Query: 519 LPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVD 578
LPGDVD++CGGPPCQG SG+NRFRN + PL +N+Q+++FMDIV FL+PKFVLMENVVD
Sbjct: 549 LPGDVDMVCGGPPCQGASGYNRFRNTEAPLTCPRNRQMVIFMDIVGFLRPKFVLMENVVD 608
Query: 579 IVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALP 638
I+KF +GLLGRYA+ RL+ M YQ ++GMMAAG+YGLPQFRMRVFLWGA P+E LP + LP
Sbjct: 609 ILKFQQGLLGRYAMFRLVDMRYQAKLGMMAAGSYGLPQFRMRVFLWGAAPSEMLPAFPLP 668
Query: 639 THDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREP 698
+HD + +G +P +F RN V + +Q E A L L D+ISDLP V N E+RDEIPY P
Sbjct: 669 SHDAIYKGNVPNQFSRNVVKHIGERQLEKA--LFLGDSISDLPPVKNCETRDEIPYRDGP 726
Query: 699 ETEFQCFIRLRKDGKKLWFN 718
+TEFQ IR +D +++
Sbjct: 727 KTEFQTRIRSARDDFTVFYG 746
>gi|302785127|ref|XP_002974335.1| hypothetical protein SELMODRAFT_30570 [Selaginella moellendorffii]
gi|300157933|gb|EFJ24557.1| hypothetical protein SELMODRAFT_30570 [Selaginella moellendorffii]
Length = 773
Score = 509 bits (1312), Expect = e-141, Method: Compositional matrix adjust.
Identities = 271/624 (43%), Positives = 384/624 (61%), Gaps = 71/624 (11%)
Query: 135 FLGDPVPDGEARQRWPKRYEVKKQKRRNQKDDDEEEIIQAKC--HYMWAEVDGHITYDLF 192
F+G P+P A+++WP RY+ K +++ + KC HY A VDG Y +
Sbjct: 1 FVGKPIPAARAKRQWPNRYDKVKAFKQSAGAGSQ------KCVEHYEEAVVDGK-HYKVG 53
Query: 193 DDAHVKAESGEEDYICKIVEMFEAVDGTPYFTAQWYYRARDTV-------------IESN 239
D ++ + + +Y+ K++E F+ + +F QW++R DTV +++
Sbjct: 54 DCVALELQGDDTEYLGKVLEFFKTANQENWFRVQWFFRFSDTVCLRLCVYPDCKCSLQAI 113
Query: 240 AHL----IDQRRVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLAIPHCDYYCDMMY 295
L +D +RVF S+ ++DN +EC++KK+ ++ P+ +D +KK +CDYY DM Y
Sbjct: 114 GDLDDVHLDNKRVFLSDDEDDNMIECIIKKVKVSYAPV-MDAFSKKKIKQNCDYYFDMGY 172
Query: 296 LLPYSTFFSLPPENKRVS---SETSSTISSDVDANECEVGEPQKMDVKLLDLYSGCGAMS 352
+STF+ +P N V E SS+ + V + K ++ LLDLY GCGAMS
Sbjct: 173 TGDFSTFYKVPSGNVFVFDALEEASSSFQTAV----TRCSDTIKPELILLDLYCGCGAMS 228
Query: 353 TGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWEKLCIS 412
TGL +GA L G+ LVT+WAVD NE+AC S+K NHPETEVRNE AE FL LL+EW+KLC
Sbjct: 229 TGLSMGAALGGVKLVTKWAVDYNEHACNSMKYNHPETEVRNEDAECFLLLLKEWQKLCTK 288
Query: 413 FSLIARKDPQQQLYSFNDDGESEEDDDNGNVEDES-----EDDSEIFEVEKILKICYGD- 466
+ +G +D+ N + D + E ++ +EV++++ I
Sbjct: 289 Y-----------------EGHVADDNSNASSPDSTTLGADEYAADEYEVQQVVDIRMAGI 331
Query: 467 ------------PKEIKKRGLYLKVRWRNYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKS 514
P++ KR L KVRW+ Y DTWEP++ L +C E+I++FV G +
Sbjct: 332 QKPKKPDTSSKMPEKPIKRRLEFKVRWKGYTSDHDTWEPVDHLDSCQERIRDFVLEGRRR 391
Query: 515 KILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLME 574
+ILPLPGDVD++CGGPPCQG SG+NRFRN + PL +N+Q+++FMDIV FL+PKFVLME
Sbjct: 392 RILPLPGDVDMVCGGPPCQGASGYNRFRNTEAPLTCPRNRQMVIFMDIVGFLRPKFVLME 451
Query: 575 NVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPP 634
NVVDI+KF +GLLGRYA+ RL+ M YQ ++GMMAAG+YGLPQFRMRVFLWGA P+E LP
Sbjct: 452 NVVDILKFQQGLLGRYAMFRLVDMRYQAKLGMMAAGSYGLPQFRMRVFLWGAAPSEMLPA 511
Query: 635 YALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPY 694
+ LPTHD + +G +P +F RN V + +Q E A L L D+ISDLP V N E+RDEIPY
Sbjct: 512 FPLPTHDAIYKGNVPNQFSRNVVKHIGERQLEKA--LFLGDSISDLPPVKNCETRDEIPY 569
Query: 695 DREPETEFQCFIRLRKDGKKLWFN 718
P+TEFQ IR +D +++
Sbjct: 570 RDGPKTEFQKRIRSARDDFAVFYG 593
>gi|14583094|gb|AAK69757.1|AF383171_1 chromomethylase CMT2 [Arabidopsis thaliana]
Length = 1244
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 270/591 (45%), Positives = 363/591 (61%), Gaps = 86/591 (14%)
Query: 135 FLGDPVPDGEARQRWPKRYEVKKQKRRNQKDDDEEEIIQAKCHYMWAEVDGHITYDLFDD 194
F+G+P+ EA++RW RYE+K +K ++ E+ IQ Y F
Sbjct: 523 FIGEPLSCEEAQERWRWRYELKMEKVTSEFSGFTEQRIQC-------------VYKFF-- 567
Query: 195 AHVKAESGEEDYICKIVEMFEAVDGTPYFTAQWYYRARDTVIESNAHLIDQRRVFFSEIQ 254
++E A D+RR+F+S +
Sbjct: 568 --------------------------------------SFIMERQATNHDKRRLFYSTVM 589
Query: 255 NDNPLECLVKKLNIARVPLNIDLEAKKLAIPHCDYYCDMMYLLPYSTFFSLPPENKRVSS 314
NDNP++CL+ K+ + +V L+ + DYY DM Y + YSTF +L N++ SS
Sbjct: 590 NDNPVDCLISKVTVLQVSPRAGLKPNSI---KSDYYFDMEYCVEYSTFQTL--RNRKCSS 644
Query: 315 ETSST---ISSDVDANECEVGEPQKM----DVKLLDLYSGCGAMSTGLCLGANLAGLNLV 367
+TS +DV E +K ++ +LDLYSGCG MSTGL LGA ++G+++V
Sbjct: 645 KTSENKLECWADVVPTESTESILKKKSFSGELPVLDLYSGCGGMSTGLSLGAKISGVDVV 704
Query: 368 TRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWEKLCISFSLIARKDPQQQLYS 427
T+WAVD N AC+SLKLNHP T+VRN++A DFL LL+EW+KLC + Y
Sbjct: 705 TKWAVDQNTAACKSLKLNHPNTQVRNDAAGDFLQLLKEWDKLC-------------KRYV 751
Query: 428 FNDDGE--------SEEDDDNGNVEDESEDDSEIFEVEKILKICYGDPKEIKKRGLYLKV 479
FN+D S ++ + + + DSE +EVEK++ IC+GDP + K GL KV
Sbjct: 752 FNNDQRTDTLRSVNSTKETSESSSSSDDDSDSEEYEVEKLVDICFGDPDKTGKNGLKFKV 811
Query: 480 RWRNYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFN 539
W+ Y EDTWE E LSNC + I+EFVT GFKSKILPLPG V VICGGPPCQG+SG+N
Sbjct: 812 HWKGYRSDEDTWELAEELSNCQDAIREFVTSGFKSKILPLPGRVGVICGGPPCQGISGYN 871
Query: 540 RFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMN 599
R RN D+PL DE+N+Q+IVFMDIV++LKP +VLMENVVDI++ KG LGRYAL+RL+ M
Sbjct: 872 RHRNVDSPLNDERNQQIIVFMDIVEYLKPSYVLMENVVDILRMDKGSLGRYALSRLVNMR 931
Query: 600 YQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAY 659
YQ R+G+M AG YGL QFR RVF+WGA P + LPP+ LPTHDV++R +P EFERN VAY
Sbjct: 932 YQARLGIMTAGCYGLSQFRSRVFMWGAVPNKNLPPFPLPTHDVIVRYGLPLEFERNVVAY 991
Query: 660 DEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQCFIRLRK 710
EGQ +L + L+L+DAISDLP V N E R+++PY+ P+T+FQ +IR K
Sbjct: 992 AEGQPRKLEKALVLKDAISDLPHVSNDEDREKLPYESLPKTDFQRYIRSTK 1042
>gi|359490000|ref|XP_002274960.2| PREDICTED: DNA (cytosine-5)-methyltransferase CMT2-like [Vitis
vinifera]
Length = 1298
Score = 496 bits (1276), Expect = e-137, Method: Compositional matrix adjust.
Identities = 255/500 (51%), Positives = 337/500 (67%), Gaps = 34/500 (6%)
Query: 235 VIESNAHLID---QRRVFFSEIQN------DNPLECLVKKLNI--ARVPLNIDLEAKKLA 283
V+ S+ L D Q+ V FSE + +E L++KL + R + ++ K +
Sbjct: 604 VVGSDNSLNDLSFQKFVSFSEFLGLLVEGFEKEVESLLRKLEVRKGRKVVGSSVKRKPSS 663
Query: 284 IPHCDYYCDMMYLLPYSTFFSLPPENKRVSSETSSTISSDV------------DANECEV 331
H + L ++ F L + +R +S + +S+ + N
Sbjct: 664 ASHAKRV--LQKLECFANFNQLGGKGRRYNSADRTNLSTSACLKTVHMNGIKPEFNRMSS 721
Query: 332 GEPQKMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEV 391
+P K ++ LLD+YSGCG MSTGLCLGA L+G++LVTRWA+DIN+ AC+SLKLNHPET++
Sbjct: 722 HKPYKPELALLDIYSGCGGMSTGLCLGAKLSGVDLVTRWALDINKSACESLKLNHPETQI 781
Query: 392 RNESAEDFLTLLREWEKLCISFSLIARKDPQQQLYSFNDDGESEE-DDDNGNVEDESEDD 450
RNESAEDFL LL+EW+KLC + + KD Q+ L + + + + GN E
Sbjct: 782 RNESAEDFLDLLKEWDKLCKRYVV---KDVQESLKVNSRVLRAAKVNSKTGNKSPSGE-- 836
Query: 451 SEIFEVEKILKICYGDPKEIKKRGLYLKVRWRNYGPSEDTWEPIEGLSNCGEKIKEFVTH 510
FEV ++ ICYGDP K GL + RW +GPSEDTWEPIEGLS C + I++FV
Sbjct: 837 ---FEVASLIDICYGDPTNSGKHGLKFQARWAGHGPSEDTWEPIEGLSKCQDLIQDFVLK 893
Query: 511 GFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKF 570
GFK+KILP PGD DVICGGPPCQG+SG+NR RN D+P DE+N+Q+IVFMDIV+FLKPK+
Sbjct: 894 GFKAKILPRPGDADVICGGPPCQGISGYNRHRNADSPFDDERNRQIIVFMDIVNFLKPKY 953
Query: 571 VLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTE 630
VLMENVVDI++FAKG +GRYAL+RL++MNYQ R+G+MAAG YGLPQ+R+RVF WGA P E
Sbjct: 954 VLMENVVDILQFAKGSVGRYALSRLVRMNYQARLGIMAAGCYGLPQYRLRVFFWGAHPDE 1013
Query: 631 KLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRD 690
+LP +ALPTHDV+L+ PT FERN VAYDEGQ +L + L+L DAI+DLP V N E+R+
Sbjct: 1014 RLPQFALPTHDVILKYGAPTAFERNIVAYDEGQSPDLEKALVLGDAIADLPPVSNNETRE 1073
Query: 691 EIPYDREPETEFQCFIRLRK 710
++ Y R PETEFQ +IR K
Sbjct: 1074 QMSYRRPPETEFQKYIRATK 1093
Score = 155 bits (393), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 76/176 (43%), Positives = 119/176 (67%), Gaps = 8/176 (4%)
Query: 135 FLGDPVPDGEARQRWPKRYEVKKQKRRNQK---DDDEEE--IIQAKCHYMWAEVDGHITY 189
+GDPVPD EARQRWP RYE K ++ + Q +DDEE+ ++ KCHY AE++ I +
Sbjct: 74 LVGDPVPDEEARQRWPWRYEEKDRQSKGQSVKPNDDEEDELVLDVKCHYSQAEIEKCI-F 132
Query: 190 DLFDDAHVKAESGEEDYICKIVEMFEAVDGTPYFTAQWYYRARDTVIESNAHLIDQRRVF 249
+L D A+VK + G +YI +I+E F+ +D YF QW++R DTV+E +++R+F
Sbjct: 133 NLGDCAYVKGKKGGRNYIGRILEFFKTMDDEDYFRVQWFFRPEDTVMEEEGAFHEKKRLF 192
Query: 250 FSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLAIPHCDYYCDMMYLLPYSTFFSL 305
+S + NDN L+C+V K+NI ++ +++L++K +I CD+Y DM YL+ YSTF ++
Sbjct: 193 YSNLVNDNLLDCIVSKVNIIQITPSVNLKSK--SILPCDFYYDMKYLIDYSTFCTM 246
>gi|357490109|ref|XP_003615342.1| DNA (cytosine-5)-methyltransferase [Medicago truncatula]
gi|355516677|gb|AES98300.1| DNA (cytosine-5)-methyltransferase [Medicago truncatula]
Length = 800
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 272/594 (45%), Positives = 353/594 (59%), Gaps = 113/594 (19%)
Query: 119 LPVRGEHDDDDEPEARFLGDPVPDGEARQRWPKRY-EVKKQKRRNQKDDDEEEIIQAKCH 177
+P+ + DD+ ++FL DP+ EA+ RWPKRY E +K+K R++ + DE+E++QA+CH
Sbjct: 107 VPMNVDGGDDEVSNSKFLRDPILLKEAKLRWPKRYLEKEKKKTRSRSNSDEDEVLQARCH 166
Query: 178 YMWAEVDGHITYDLFDDAHVKAESGEEDYICKIVEMFEAVDGTPYFTAQWYYRARDTVIE 237
Y A+VDG + Y L+DDAHVK E + +ICKI+EMFEAVDG YFT
Sbjct: 167 YTEAKVDGGVIYKLYDDAHVKGEKDDYHFICKIMEMFEAVDGELYFTP------------ 214
Query: 238 SNAHLIDQRRVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLAIPHCDYYCDMMYLL 297
+RVF SE+Q+DNPL+CLV+KL IA + L D +A IP C YYCD +YLL
Sbjct: 215 --------KRVFLSEVQDDNPLDCLVEKLTIALLELKKDFDATNDVIPPCKYYCDTLYLL 266
Query: 298 PYSTFFSLPPENKRVSSETSSTISSDVDANECEVG---EPQKMDVKLLDLYSGCGAMSTG 354
S+ +S+ET S+VD+ + +K ++KLLDLYSGCG MSTG
Sbjct: 267 EISS---------TISNETEVNAKSEVDSKSAITDINDDKKKPELKLLDLYSGCGGMSTG 317
Query: 355 LCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWEKLCISFS 414
LC L+G ++VT+W VD+N+ ACQSLKLNHPETEVR
Sbjct: 318 LCQWRILSGSDIVTKWVVDLNKDACQSLKLNHPETEVR---------------------- 355
Query: 415 LIARKDPQQQLYSFNDDGESEEDDDNGNVEDESEDDSEIFEVEKILKICYGDPKEIKKRG 474
+EE+DD +V Y D + G
Sbjct: 356 -------------------NEEEDDVHDVR-------------------YDDANKETGPG 377
Query: 475 LYLKVRWRNYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQG 534
LY+KV W+ Y +D WEPI GLSNC E IK+FVT GFKS
Sbjct: 378 LYIKVSWKGYNYDKDIWEPINGLSNCKEMIKDFVTRGFKS-------------------- 417
Query: 535 VSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALAR 594
+ GFNRFRN NPL DEKNKQL+V+MDIV +L+P+F LMENVV++++F +G LGRYAL R
Sbjct: 418 IRGFNRFRNFANPLDDEKNKQLMVYMDIVQYLQPRFTLMENVVNLLRFLEGFLGRYALGR 477
Query: 595 LIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFER 654
L+QMNYQ R+G++AA AYGL QFR+RVFLWG P+E L + L THDV+ RG +P EFE
Sbjct: 478 LVQMNYQSRLGILAARAYGLRQFRLRVFLWGGTPSENLHQFPLRTHDVIERGFVPVEFEG 537
Query: 655 NTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQCFIRL 708
VAY EG A+L +KL L DAISDL S++N ESRD++ Y +FQ FIRL
Sbjct: 538 CLVAYSEGHSAQLQKKLELNDAISDLFSIENNESRDDMDYCGPLLIDFQKFIRL 591
>gi|297837287|ref|XP_002886525.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297332366|gb|EFH62784.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 732
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 270/550 (49%), Positives = 347/550 (63%), Gaps = 61/550 (11%)
Query: 172 IQAKCHYMWAEVDGHITYDLFDDAHVKAESGEEDYICKIVEMFEAVDGTPYFTAQWYYRA 231
++A HY A V+G + Y L DD +V+A+ GE + I KI+E+FE VDG YF AQ +YRA
Sbjct: 16 LEATSHYDKALVNG-VVYSLNDDIYVQAK-GEPNRIAKIIELFEGVDGEGYFRAQLFYRA 73
Query: 232 RDTVIESNA--HLIDQRRVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLAIPHCDY 289
DTVI+ A +L ++RRVF S ++ D L +V K++I ++P I LE ++ IP CD+
Sbjct: 74 EDTVIQDLAGEYLQEKRRVFLSNVEADYSLNLIVSKVHIIKLPAKILLENEERDIPACDF 133
Query: 290 YCDMMYLLPYSTFFSLPPENKRVSSETSSTISSDVDANECEVGEPQKMDVKLLDLYSGCG 349
+ DM Y L + TF S+ E V S+ + S C + +LDLYSGCG
Sbjct: 134 FYDMRYNLEHLTFSSVDNEISNVEGNDSNNVGS------C------NKEKYMLDLYSGCG 181
Query: 350 AMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWEKL 409
AMSTGLC+GA+L+G+NL+T+WAVD N +AC+SLKLNHPET+ R + EK
Sbjct: 182 AMSTGLCMGASLSGVNLITKWAVDNNSFACESLKLNHPETKCRR-----IFEIAEGMEKA 236
Query: 410 CISFSLIARKDPQQQLYSFNDDGESEEDDDNGNVEDES---EDDSEIFEVEKILKICYGD 466
+ +P + F DD ESE NVE ES E + FEV+++L ICYGD
Sbjct: 237 MPKVFTSPKTEPLELDSDFEDDNESE-----NNVEGESDGYEMSPDEFEVDEVLSICYGD 291
Query: 467 PKE-------IKKRGLYLKVRWRNY-GPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILP 518
PK+ +K LY KV W+ Y E+TWEP +GL C EK+KEFVT GFKSK+LP
Sbjct: 292 PKKANASVKKVKPSALYFKVHWKGYDSEEENTWEPYDGLRKCKEKVKEFVTKGFKSKLLP 351
Query: 519 LPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVD 578
LPGDV ++CGGPPCQG+SGFNRFRNKD PL DEKN Q+ VFMDI+D+LKPK+VLMENVV
Sbjct: 352 LPGDVHIVCGGPPCQGLSGFNRFRNKDKPLQDEKNNQVTVFMDIIDYLKPKYVLMENVVS 411
Query: 579 IVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALP 638
++ FAKG +GRYA+ARL+ NYQ R+G+MAAGAYG+PQ R RVFLWGAQP+E+L
Sbjct: 412 LLGFAKGFVGRYAVARLVNKNYQARLGIMAAGAYGVPQCRYRVFLWGAQPSEELK----- 466
Query: 639 THDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREP 698
+ +L L L DA SDLP V N+E R+ I YD EP
Sbjct: 467 -------------------VGNNRSDLQLKTALTLGDATSDLPEVTNFEEREAINYDIEP 507
Query: 699 ETEFQCFIRL 708
ETEFQ FI L
Sbjct: 508 ETEFQKFISL 517
>gi|213498014|emb|CAS84142.1| chromomethylase [Nicotiana tomentosiformis]
Length = 500
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 238/361 (65%), Positives = 280/361 (77%), Gaps = 1/361 (0%)
Query: 353 TGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWEKLCIS 412
TGLCLGA++ G+ LVT+WAVD+N+YAC SLK NHPET VRNESA+DFL LLREW +LC S
Sbjct: 1 TGLCLGADIGGVKLVTKWAVDLNQYACDSLKWNHPETAVRNESADDFLLLLREWRQLCAS 60
Query: 413 FSLIARKDPQQQLYSFNDDGESEEDDDNGNVEDESEDD-SEIFEVEKILKICYGDPKEIK 471
SL+ P D+ + +++D+ E +D+ EIFEVE++L+ICYGDPKE
Sbjct: 61 CSLLRNNTPTHSFLKVRDEDDKDDNDNEDEDEGSGDDEQGEIFEVEQLLEICYGDPKEKN 120
Query: 472 KRGLYLKVRWRNYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDVDVICGGPP 531
K GLY KVRW+ YG EDTWEPIEGL C EKIK+FV GFK+ ILPLPG+V VICGGPP
Sbjct: 121 KPGLYFKVRWKGYGQEEDTWEPIEGLDGCQEKIKDFVAKGFKASILPLPGEVQVICGGPP 180
Query: 532 CQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYA 591
CQGVSGFNRFRN NPL D KNKQL FMDIV+FL P+FVLMENVVD+VKFA G LGRYA
Sbjct: 181 CQGVSGFNRFRNSTNPLGDSKNKQLETFMDIVEFLNPQFVLMENVVDLVKFADGFLGRYA 240
Query: 592 LARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTE 651
L RL+ MNYQ RMGMM AGAYGLPQFR RVF+WGA P+EKLP Y LPTH+VV+RG +P E
Sbjct: 241 LGRLVGMNYQARMGMMVAGAYGLPQFRRRVFMWGALPSEKLPQYPLPTHNVVVRGGMPKE 300
Query: 652 FERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQCFIRLRKD 711
FE N VAYDE + EL R+L L+DAISDLP V+N E DE+PY EP++ FQ FIR R++
Sbjct: 301 FELNVVAYDEALKVELKRELFLKDAISDLPPVENDEPTDEMPYIDEPKSAFQHFIRSRRN 360
Query: 712 G 712
G
Sbjct: 361 G 361
>gi|2832630|emb|CAA16759.1| putative protein [Arabidopsis thaliana]
gi|7268696|emb|CAB78904.1| putative protein [Arabidopsis thaliana]
Length = 1171
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 267/648 (41%), Positives = 366/648 (56%), Gaps = 101/648 (15%)
Query: 71 EPEACVEKEGEVAEVICENSVAGSGSSSGV---KVNKNRSSSKKPIDSVKKLPVRGEHDD 127
EP + G+ + S SG + G+ +N S+K+ V + V +
Sbjct: 459 EPSSIEYLNGDNLTQVESGSALSSGGNEGIVSLDLNNPTKSTKRKGKRVTRTAV---QEQ 515
Query: 128 DDEPEARFLGDPVPDGEARQRWPKRYEVKKQKRRNQKDDDEEEIIQAKCHYMWAEVDGHI 187
+ F+G+P+ EA++RW RYE+K +K ++ E+ IQ
Sbjct: 516 NKRSICFFIGEPLSCEEAQERWRWRYELKMEKATSEFSGFTEQRIQC------------- 562
Query: 188 TYDLFDDAHVKAESGEEDYICKIVEMFEAVDGTPYFTAQWYYRARDTVIESNAHLIDQRR 247
Y F ++E A D+RR
Sbjct: 563 VYKFF----------------------------------------SFIMERQATNHDKRR 582
Query: 248 VFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLAIPHCDYYCDMMYLLPYSTFFSLPP 307
+F+S + NDNP++CL+ K+ + +V + L+ + DYY DM Y + YSTF +L
Sbjct: 583 LFYSTVMNDNPVDCLISKVTVLQVSPRVGLKPNSI---KSDYYFDMEYCVEYSTFQTL-- 637
Query: 308 ENKRVSSETSST---ISSDVDANECEVGEPQKM----DVKLLDLYSGCGAMSTGLCLGAN 360
N++ SS+TS +DV E +K ++ +LDLYSGCG MSTGL LGA
Sbjct: 638 RNRKCSSKTSENKLECCADVVPTESTESILKKKSFSGELPVLDLYSGCGGMSTGLSLGAK 697
Query: 361 LAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWEKLCISFSLIARKD 420
++G+++VT+WAVD N AC+SLKLNHP T+VRN++A DFL LL+EW+KLC + +
Sbjct: 698 ISGVDVVTKWAVDQNTAACKSLKLNHPNTQVRNDAAGDFLQLLKEWDKLCKRY-VFNNDQ 756
Query: 421 PQQQLYSFNDDGESEEDDDNGNVEDESEDDSEIFEVEKILKICYGDPKEIKKRGLYLKVR 480
L S N E+ + + + +SE+ +EVEK++ IC+GD + K GL KV
Sbjct: 757 RTDTLRSVNSTKETSGSSSSSDDDSDSEE----YEVEKLVDICFGDHDKTGKNGLKFKVH 812
Query: 481 WRNYGPSEDTWEPIEGL-------------------------SNCGEKIKEFVTHGFKSK 515
W+ Y EDTWE E L SNC + I+EFVT GFKSK
Sbjct: 813 WKGYRSDEDTWELAEELRYMLQNNVKKRFCCYLELINFVWNFSNCQDAIREFVTSGFKSK 872
Query: 516 ILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMEN 575
ILPLPG V VICGGPPCQG+SG+NR RN D+PL DE+N+Q+IVFMDIV++LKP +VLMEN
Sbjct: 873 ILPLPGRVGVICGGPPCQGISGYNRHRNVDSPLNDERNQQIIVFMDIVEYLKPSYVLMEN 932
Query: 576 VVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPY 635
VVDI++ KG LGRYAL+RL+ M YQ R+G+M AG YGL QFR RVF+WGA P + LPP+
Sbjct: 933 VVDILRMDKGSLGRYALSRLVNMRYQARLGIMTAGCYGLSQFRSRVFMWGAVPNKNLPPF 992
Query: 636 ALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSV 683
LPTHDV++R +P EFERN VAY EGQ +L + L+L+DAISDLP V
Sbjct: 993 PLPTHDVIVRYGLPLEFERNVVAYAEGQPRKLEKALVLKDAISDLPHV 1040
>gi|297842789|ref|XP_002889276.1| hypothetical protein ARALYDRAFT_895912 [Arabidopsis lyrata subsp.
lyrata]
gi|297335117|gb|EFH65535.1| hypothetical protein ARALYDRAFT_895912 [Arabidopsis lyrata subsp.
lyrata]
Length = 876
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 262/600 (43%), Positives = 352/600 (58%), Gaps = 83/600 (13%)
Query: 119 LPVRGEHDDDDEPEAR--FLGDPVPDGEARQRWPKRYEVKKQK---RRNQKDDDEEEIIQ 173
+ V+ + EPE+ F G PV E+ RWP RY KK K K D +E+I
Sbjct: 1 MAVKNKQMKRAEPESDLCFAGKPVSVVESMIRWPHRYPSKKTKLEAATATKGDKKEKIKL 60
Query: 174 AKCHYMWAEVDGHITYDLFDDAHVKAESGEEDYICKIVEMFEAVDGTPYFTAQWYYRARD 233
AK HY A VDG + +L DD +V G+ ++I K++EMFEA DG PY +W+YR D
Sbjct: 61 AKRHYEQALVDG-VLINLNDDVYVTGLPGKLNFIGKVIEMFEADDGVPYSRIRWFYRPND 119
Query: 234 TVIESNAHLIDQRRVFFSEIQNDNPLECLVKKLNIARVPL-NIDLEAKKLAIPHCDYYCD 292
T+IE A L+ ++RVF S +++DNPL C+ K+NIA+VPL I ++ IP CDYY D
Sbjct: 120 TLIERFAELVQKKRVFLSNVEDDNPLTCIYSKVNIAKVPLPKITSRIEQRVIPPCDYYYD 179
Query: 293 MMYLLPYSTFFSLPPENKRVSSETSSTISSDVDANECEVGEPQKMDVK-LLDLYSGCGAM 351
M Y +PY F S + + ++ S+ + E D K LLDLYSGCGAM
Sbjct: 180 MKYEVPYLNFTS--------ADDDTAASSTLSSDSASNCFETLHKDEKYLLDLYSGCGAM 231
Query: 352 STGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWEKLCI 411
STG C+GA++AG+ L+T+W+VDIN++AC S + NHPETEVRNE+AEDFL LL+EW++LC
Sbjct: 232 STGFCMGASIAGVKLITKWSVDINKFACDSFRHNHPETEVRNEAAEDFLILLKEWKRLCE 291
Query: 412 SFSLIARKDPQQQLYSFNDDGESEEDDDNGNVEDESEDDSEIFEVEKILKICYGDPKEIK 471
FSL + +P + + S +D ES+E+DD E + FEVEK + I +GDPK
Sbjct: 292 RFSLSSSTEPMESI-SELEDEESDENDDIDEASTGMELSAGEFEVEKFVGIVFGDPKGTG 350
Query: 472 KRGLYLKVRWRNYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDVDVICGGPP 531
++ L+LK G V +CGGPP
Sbjct: 351 EKTLHLK------------------------------------------GTVYSVCGGPP 368
Query: 532 CQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYA 591
CQG+SG+NRFRNK PL D+KN+QL+VF+DI+DFLKP +VLMENVVD+++F+KG L R+A
Sbjct: 369 CQGISGYNRFRNKQAPLEDKKNQQLLVFLDIIDFLKPSYVLMENVVDLLRFSKGYLARHA 428
Query: 592 LARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTE 651
+A + MNYQ R+GMM AG+YGLPQ R RVFLW AQPTE L
Sbjct: 429 VASFVAMNYQTRLGMMTAGSYGLPQVRNRVFLWAAQPTEDL------------------- 469
Query: 652 FERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPY-DREPETEFQCFIRLRK 710
V + + +L L L DAISDLP V N E+ D Y D P+T+F+ FI L++
Sbjct: 470 ----QVGLIQKELLQLDNALTLADAISDLPPVTNSEANDVRNYNDAAPKTDFENFISLKR 525
>gi|1297185|gb|AAA98912.1| theoretical protein with similarity to Swiss-Prot Accession Number
P34881 DNA (cytosine-5-) methyltransferase [Arabidopsis
thaliana]
Length = 620
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 203/371 (54%), Positives = 262/371 (70%), Gaps = 25/371 (6%)
Query: 341 LLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFL 400
LLDLYSGCGAMSTG C+GA+++G+ L+T+W+VDIN++AC SLKLNHPETEVRNE+AEDFL
Sbjct: 145 LLDLYSGCGAMSTGFCMGASISGVKLITKWSVDINKFACDSLKLNHPETEVRNEAAEDFL 204
Query: 401 TLLREWEKLCISFSLIARKDPQQQLYSFNDDGESEEDDDNGNVEDESEDDSEIFEVEKIL 460
LL+EW++LC FSL++ +P + + S +D E EE+DD +E + FEVEK L
Sbjct: 205 ALLKEWKRLCEKFSLVSSTEPVESI-SELEDEEVEENDDIDEASTGAELEPGEFEVEKFL 263
Query: 461 KICYGDPKEIKKRGLYLKVRWRNYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLP 520
I +GDP+ ++ L L VRW+ Y S DTWEP GL NC EK+KE+V GFKS +LPL
Sbjct: 264 GIMFGDPQGTGEKTLQLMVRWKGYNSSYDTWEPYSGLGNCKEKLKEYVIDGFKSHLLPLS 323
Query: 521 GDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIV 580
G V +CGGPPCQG+SG+NR+RN + PL D+KN+QL+VF+DI+DFLKP +VLMENVVD++
Sbjct: 324 GTVYTVCGGPPCQGISGYNRYRNNEAPLEDQKNQQLLVFLDIIDFLKPNYVLMENVVDLL 383
Query: 581 KFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTH 640
+F+KG L R+A+A + MNYQ R+GMMAAG+YGLPQ R RVFLW AQP+E L
Sbjct: 384 RFSKGFLARHAVASFVAMNYQTRLGMMAAGSYGLPQLRNRVFLWAAQPSEDLQ------- 436
Query: 641 DVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPY-DREPE 699
G I EF + L L L DAISDLP V NY + D + Y D P+
Sbjct: 437 ----VGRIQMEFLK------------LDNALTLADAISDLPPVTNYVANDVMDYNDAAPK 480
Query: 700 TEFQCFIRLRK 710
TEF+ FI L++
Sbjct: 481 TEFENFISLKR 491
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 46/95 (48%), Gaps = 17/95 (17%)
Query: 119 LPVRGEHDDDDEPEAR--FLGDPVPDGEARQRWPKRYEVKKQKRR--------------N 162
+ R + EPE+ F G P+ E+ RWP RY+ KK K +
Sbjct: 1 MAARNKQKKRAEPESDLCFAGKPMSVVESTIRWPHRYQSKKTKLQAPTKKPANKGYNFTG 60
Query: 163 QKDDDEEEIIQAKCHYMWAEVDGHITYDLFDDAHV 197
K +DEE I QAKCH+ A VDG + +L DD +V
Sbjct: 61 GKKEDEEIIKQAKCHFDKALVDG-VLINLNDDVYV 94
>gi|297746421|emb|CBI16477.3| unnamed protein product [Vitis vinifera]
Length = 821
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/238 (76%), Positives = 204/238 (85%), Gaps = 1/238 (0%)
Query: 475 LYLKVRWRNYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQG 534
L++ VRW+ YGPS D+WEP EGL NC E IK+FVT G+KSKILPLPGDVDVICGGPPCQG
Sbjct: 381 LFIYVRWKGYGPSADSWEPFEGLGNCCESIKDFVTEGYKSKILPLPGDVDVICGGPPCQG 440
Query: 535 VSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALAR 594
+SGFNRFRNK+NPL D KNKQL+VFMD+V++LKP+FVLMENVVDIVKFA G LGRYAL R
Sbjct: 441 ISGFNRFRNKENPLEDPKNKQLVVFMDVVNYLKPRFVLMENVVDIVKFAGGYLGRYALGR 500
Query: 595 LIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFER 654
LI MNYQ RMGMMAAGAYGLPQFRMRVF+WGA+ E LP Y LPTHDV++RGVIP EFE
Sbjct: 501 LIGMNYQTRMGMMAAGAYGLPQFRMRVFMWGARFEEVLPQYPLPTHDVIIRGVIPLEFEM 560
Query: 655 NTVAYDEGQQA-ELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQCFIRLRKD 711
NTVAYDEG + EL KLLL DAISDLP V N E+RDE+PY + P+TEFQ FIRLRK+
Sbjct: 561 NTVAYDEGHKFDELETKLLLADAISDLPPVTNDEARDEMPYGKAPQTEFQRFIRLRKN 618
Score = 368 bits (945), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 180/286 (62%), Positives = 221/286 (77%), Gaps = 15/286 (5%)
Query: 129 DEPEARFLGDPVPDGEARQRWPKRYEVKKQKRRN-QKDDDEEEIIQAKCHYMWAEVDGHI 187
+E + R +G+ +PD EARQRWP+RYE K + DD EEI++A+CHY AE+DG +
Sbjct: 7 EEGDCRLVGEVIPDEEARQRWPERYEPKVYRNWFCSTKDDSEEIVKARCHYRQAEIDGRV 66
Query: 188 TYDLFDDAHVKAESGEEDYICKIVEMFEAVDGTPYFTAQWYYRARDTVIESNAHLIDQRR 247
+L DDAHVKA + YICKIVE+F A+DGTPYFTAQW+YRARDTVI+ +A+LID +R
Sbjct: 67 IVNLNDDAHVKAGDNADHYICKIVELFVALDGTPYFTAQWFYRARDTVIKDHANLIDNKR 126
Query: 248 VFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLAIPHCDYYCDMMYLLPYSTFFSLPP 307
VFFSE+++DNPL+CLV+KLNIARVP N+DLEA+KLAI CDYY DM+YLL YS+F LPP
Sbjct: 127 VFFSEMRDDNPLDCLVQKLNIARVPHNLDLEARKLAISSCDYYYDMLYLLDYSSFIKLPP 186
Query: 308 ENKRVSSETSSTISSDVDANECEVGEPQKMDVKLLDLYSGCGAMSTGLCLGANLAGLNLV 367
EN S E S A E + E + LLDLYSGCGAMS+GLCLGA ++G+NLV
Sbjct: 187 ENN--SEEVSQ-------ARERSLSE-----MTLLDLYSGCGAMSSGLCLGAKMSGVNLV 232
Query: 368 TRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWEKLCISF 413
TRWA+DIN YAC+S++LNHPET+VRNESAEDFL LLREWEKLC F
Sbjct: 233 TRWAIDINAYACESVRLNHPETQVRNESAEDFLALLREWEKLCCKF 278
>gi|224076026|ref|XP_002304879.1| hypothetical protein POPTRDRAFT_555247 [Populus trichocarpa]
gi|222842311|gb|EEE79858.1| hypothetical protein POPTRDRAFT_555247 [Populus trichocarpa]
Length = 363
Score = 295 bits (756), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 163/316 (51%), Positives = 202/316 (63%), Gaps = 38/316 (12%)
Query: 89 NSVAGSGSSSGVKVNKNRSSSKKPIDSVK-----KLPVRGEHDDDDEPEARFLGDPVPDG 143
NSV G+ G +R +K+ S K PV+ + +DE ARF+G +P
Sbjct: 61 NSVDEVGARMGTGSADSRPDTKEKRGSGKAEKKISTPVKVK---EDETPARFVGAQIPGA 117
Query: 144 EARQRWPKRYEVKKQKRRNQKDDDEEEIIQAKCHYMWAEVDGHITYDLFDDAHVKAESGE 203
EAR++WP RY K I++A+CHY AEVD I YDL+ DAHV+A GE
Sbjct: 118 EARKKWPHRYANK--------------IVKARCHYTRAEVD-RIIYDLYYDAHVQASDGE 162
Query: 204 EDYICKIVEMFEAVDGTPYFTAQWYYRARDTVIESNAHLIDQRRVFFSEIQNDNPLECLV 263
DYIC+I EMFE+VD T YFT QWYYR+ T+I+ + ++ D + VFFSEI+NDNPLECL
Sbjct: 163 PDYICRISEMFESVDRTLYFTTQWYYRSTVTIIK-DKYISDPKCVFFSEIRNDNPLECLT 221
Query: 264 KKLNIARVPLNIDLEAKKLAIPHCDYYCDMMYLLPYSTFFSLPPENKRVSSETSSTISSD 323
KLNI R+ LN+D E ++ CD+YCDM+YLLPYSTF LP EN E SSTIS+D
Sbjct: 222 WKLNIVRLALNVDPENRRARSSGCDFYCDMLYLLPYSTFVRLPTENNTTGPE-SSTISND 280
Query: 324 VDA--------NECEVGEPQKMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDIN 375
+DA CE K +V LLDLYSGCGAMSTGLCL GLNLVT+WAVD+N
Sbjct: 281 IDAAGVKSECDEVCETSGSSKSEVALLDLYSGCGAMSTGLCL-----GLNLVTKWAVDLN 335
Query: 376 EYACQSLKLNHPETEV 391
ACQSL+LNHPET+V
Sbjct: 336 INACQSLRLNHPETQV 351
>gi|224076024|ref|XP_002304878.1| hypothetical protein POPTRDRAFT_555246 [Populus trichocarpa]
gi|222842310|gb|EEE79857.1| hypothetical protein POPTRDRAFT_555246 [Populus trichocarpa]
Length = 250
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 144/231 (62%), Positives = 166/231 (71%), Gaps = 25/231 (10%)
Query: 455 EVEKILKICYGDPKEIKKRGLYLKVRWRNYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKS 514
+VEKIL+ICYGDPK +NYGP DTWEPI GL NC E IK FV HG+ S
Sbjct: 18 KVEKILEICYGDPK-------------KNYGPDYDTWEPISGLINCREAIKNFVMHGYLS 64
Query: 515 KILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLME 574
ILPLPGDVDVICGGPPCQG+SGFNRFRN +PL D KNKQLIVFMD VDFL+PKFVL+E
Sbjct: 65 NILPLPGDVDVICGGPPCQGISGFNRFRNTKSPLDDPKNKQLIVFMDTVDFLRPKFVLIE 124
Query: 575 NVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRV--FLWGAQPTEKL 632
NVVD++KFA G +GRYA+ L M YQ R+GM+ G FR V F +G K
Sbjct: 125 NVVDLLKFADGFIGRYAMGCLTNMKYQARLGML-----GHTVFRSFVCGFFYG-----KP 174
Query: 633 PPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSV 683
P Y LPTHDV+ RG+ P EFE NTVAY+EG QA+L KL L+DAISDLP++
Sbjct: 175 PQYPLPTHDVLGRGIAPVEFEGNTVAYEEGVQAQLENKLFLKDAISDLPAL 225
>gi|115480860|ref|NP_001064023.1| Os10g0104900 [Oryza sativa Japonica Group]
gi|113638632|dbj|BAF25937.1| Os10g0104900, partial [Oryza sativa Japonica Group]
Length = 406
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 127/190 (66%), Positives = 150/190 (78%)
Query: 521 GDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIV 580
GDVDVICGGPPCQG+SGFNRFRN+ PL DEKNKQ++ FMDIV +LKPK+VLMENVVDI+
Sbjct: 1 GDVDVICGGPPCQGISGFNRFRNRKEPLKDEKNKQMVTFMDIVAYLKPKYVLMENVVDIL 60
Query: 581 KFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTH 640
KFA G LGRYAL+RL+ M YQ R+GMM AG YGLPQFRMRVFLWGA PT LP Y LPTH
Sbjct: 61 KFADGYLGRYALSRLVAMKYQARLGMMVAGCYGLPQFRMRVFLWGALPTMVLPKYPLPTH 120
Query: 641 DVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPET 700
+VV+RG P F ++ VAYDE Q+ L LLL DAISDLP V+N++ + + Y P+T
Sbjct: 121 NVVVRGGAPNAFSQSIVAYDETQKPTLKNALLLGDAISDLPEVNNHQPNEVMEYGSSPKT 180
Query: 701 EFQCFIRLRK 710
EFQ +IRL +
Sbjct: 181 EFQRYIRLSR 190
>gi|110288523|gb|ABB46585.2| DNA cytosine methyltransferase MET2a, putative, expressed [Oryza
sativa Japonica Group]
Length = 371
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 97/155 (62%), Positives = 118/155 (76%)
Query: 556 LIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLP 615
++ FMDIV +LKPK+VLMENVVDI+KFA G LGRYAL+RL+ M YQ R+GMM AG YGLP
Sbjct: 1 MVTFMDIVAYLKPKYVLMENVVDILKFADGYLGRYALSRLVAMKYQARLGMMVAGCYGLP 60
Query: 616 QFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQD 675
QFRMRVFLWGA PT LP Y LPTH+VV+RG P F ++ VAYDE Q+ L LLL D
Sbjct: 61 QFRMRVFLWGALPTMVLPKYPLPTHNVVVRGGAPNAFSQSIVAYDETQKPTLKNALLLGD 120
Query: 676 AISDLPSVDNYESRDEIPYDREPETEFQCFIRLRK 710
AISDLP V+N++ + + Y P+TEFQ +IRL +
Sbjct: 121 AISDLPEVNNHQPNEVMEYGSSPKTEFQRYIRLSR 155
>gi|297600571|ref|NP_001049442.2| Os03g0226800 [Oryza sativa Japonica Group]
gi|255674328|dbj|BAF11356.2| Os03g0226800, partial [Oryza sativa Japonica Group]
Length = 130
Score = 195 bits (495), Expect = 8e-47, Method: Composition-based stats.
Identities = 83/109 (76%), Positives = 96/109 (88%)
Query: 521 GDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIV 580
G VDVICGGPPCQG+SGFNRFR ++PL DEKNKQL+VFMDIV +L+PK+VLMENVVDI+
Sbjct: 4 GAVDVICGGPPCQGISGFNRFRKHNDPLEDEKNKQLVVFMDIVKYLRPKYVLMENVVDIL 63
Query: 581 KFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPT 629
KFA G LGRYA++ L+ MNYQ R+GMMAAG YGLPQFRMR FLWGA P+
Sbjct: 64 KFADGFLGRYAMSCLVAMNYQARLGMMAAGYYGLPQFRMRAFLWGALPS 112
>gi|147801051|emb|CAN77847.1| hypothetical protein VITISV_020831 [Vitis vinifera]
Length = 320
Score = 182 bits (462), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 90/163 (55%), Positives = 110/163 (67%), Gaps = 35/163 (21%)
Query: 521 GDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIV 580
GD DVICGGPPCQG+SG+NR RN D+P DE+N+Q+IVFMDIV+FLKPK+VLMENVVDI+
Sbjct: 183 GDADVICGGPPCQGISGYNRHRNADSPFDDERNRQIIVFMDIVNFLKPKYVLMENVVDIL 242
Query: 581 KFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTH 640
+FAKG +GRYAL+RL +LP +ALPTH
Sbjct: 243 QFAKGSVGRYALSRL-----------------------------------RLPQFALPTH 267
Query: 641 DVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSV 683
DV+L+ PT FERN VAYDEGQ +L + L+L DAI+DLP V
Sbjct: 268 DVILKYGAPTAFERNIVAYDEGQSPDLEKALVLGDAIADLPPV 310
>gi|169977308|emb|CAQ18901.1| chromomethylase [Nicotiana sylvestris]
Length = 308
Score = 182 bits (462), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 83/120 (69%), Positives = 99/120 (82%)
Query: 593 ARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEF 652
RL+ MNYQ RMGMMAAGAYGLPQFRMRVF+WGA +EKLP Y LPTH V++RGVIPTEF
Sbjct: 1 GRLVGMNYQARMGMMAAGAYGLPQFRMRVFMWGALSSEKLPQYPLPTHKVIVRGVIPTEF 60
Query: 653 ERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQCFIRLRKDG 712
E NTVA DEG++ +L ++L L DA+SDLPSV+N E RDE+PY EP ++FQ FIRL +DG
Sbjct: 61 ESNTVALDEGREIDLKKELFLGDALSDLPSVENNEQRDEMPYTNEPTSDFQHFIRLGRDG 120
>gi|16755863|gb|AAL28119.1|AF433678_1 putative chromomethylase MTH1 [Triticum aestivum]
Length = 107
Score = 178 bits (452), Expect = 7e-42, Method: Composition-based stats.
Identities = 73/105 (69%), Positives = 91/105 (86%)
Query: 525 VICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAK 584
++CGGPPCQG+SG NRFRN + PL D++NKQL+VFMD+V++L+PK+VLMENVVDI+KFA
Sbjct: 1 MVCGGPPCQGISGLNRFRNYNEPLEDDRNKQLVVFMDVVNYLRPKYVLMENVVDILKFAD 60
Query: 585 GLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPT 629
G LGRYAL+RL+ M YQ R+G+M AG YGLPQFRMR FL GA P+
Sbjct: 61 GFLGRYALSRLVSMRYQARLGLMVAGCYGLPQFRMRAFLGGALPS 105
>gi|2865418|gb|AAC02661.1| chromomethylase [Arabidopsis thaliana]
Length = 248
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 106/256 (41%), Positives = 142/256 (55%), Gaps = 20/256 (7%)
Query: 119 LPVRGEHDDDDEPEAR--FLGDPVPDGEARQRWPKRYEVKKQK---------RRNQKDDD 167
+ R + EPE+ F G P+ E+ RWP RY+ KK K + K +D
Sbjct: 1 MAARNKQKKRAEPESDLCFAGKPMSVVESTIRWPHRYQSKKTKLQAPTKKPANKGGKKED 60
Query: 168 EEEIIQAKCHYMWAEVDGHITYDLFDDAHVKAESGEEDYICKIVEMFEAVDGTPYFTAQW 227
EE I QAKCH+ A VDG + +L DD +V G+ +I K++E+FEA DG PY +W
Sbjct: 61 EEIIKQAKCHFDKALVDG-VLINLNDDVYVTGLPGKLKFIAKVIELFEADDGVPYCRFRW 119
Query: 228 YYRARDTVIESNAHLIDQRRVFFSEIQNDNPLECLVKKLNIARVPL-NIDLEAKKLAIPH 286
YYR DT+IE +HL+ +RVF S +N NPL C+ K+NIA+VPL I ++ IP
Sbjct: 120 YYRPEDTLIERFSHLVQPKRVFLSNDENGNPLTCIWSKVNIAKVPLPKITSRIEQRVIPP 179
Query: 287 CDYYCDMMYLLPYSTFFSLPPENKRVSSETSSTISSDVDANECEVGEPQKMDVKLLDLYS 346
CDYY DM Y +PY F +S+ S A C K + LLDLYS
Sbjct: 180 CDYYYDMKYEVPYLNF------TSADDGSDASSSLSSDSALNC-FENLHKDEKFLLDLYS 232
Query: 347 GCGAMSTGLCLGANLA 362
GCGAMSTG C+GA+++
Sbjct: 233 GCGAMSTGFCMGASIS 248
>gi|307106990|gb|EFN55234.1| hypothetical protein CHLNCDRAFT_52630 [Chlorella variabilis]
Length = 1211
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 91/245 (37%), Positives = 135/245 (55%), Gaps = 17/245 (6%)
Query: 472 KRGLYLKVRWRNYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDVDVICGGPP 531
+R L KV G ++ W + L E ++ FV + +++P PG+VD ICGGPP
Sbjct: 492 ERWLEFKVVMEAGGEQQEVWLSRKQLKGQDELLRGFVRKLRERQLIPFPGEVDFICGGPP 551
Query: 532 CQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYA 591
CQG+SG NR ++ L D +N+QL VF+ ++ KPK+VLMENV DI+K GL +YA
Sbjct: 552 CQGISGNNRHAMTEDILQDPRNRQLPVFIAYSEWFKPKYVLMENVQDILKKEDGLYIKYA 611
Query: 592 LARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVL------- 644
+ ++ M YQVR+G++AAG +G+PQ R R FLW A P ++LP PTH+ +
Sbjct: 612 MGSMLNMRYQVRVGLLAAGNFGVPQGRWRCFLWAAAPGQQLPAIPKPTHNCIHFKAGSRR 671
Query: 645 --RGVIP------TEFERNTVAYDEGQQAELARK--LLLQDAISDLPSVDNYESRDEIPY 694
+ P +R T + + + +LL D SDLP VDN+E + Y
Sbjct: 672 DSQAAAPRCCATANNAKRLTSGFVSNEDCTMNGHPPVLLGDIFSDLPEVDNFELHERRRY 731
Query: 695 DREPE 699
+ P+
Sbjct: 732 ETGPQ 736
Score = 42.7 bits (99), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 65/309 (21%), Positives = 112/309 (36%), Gaps = 61/309 (19%)
Query: 126 DDDDEPEARFLGDPVPDGEARQRWPKRYEV-------KKQKRRNQKDDDEEE-------- 170
DD+ +LGDP+P EARQR+P+R V ++ R K E E
Sbjct: 20 DDEYAGGYHWLGDPMPPAEARQRYPERELVDLVGVSEAQRARLVAKHRKEREAGTGRRSY 79
Query: 171 --IIQAKCHYMWAEVD----GHITYDLFDDAHVKAESGEEDY----ICKIVEMFEAVDGT 220
A H WA+ D G Y D +K G+E+ + ++ E+++ DG
Sbjct: 80 HPAAAAHFHGFWADEDEDGKGDQQYVYCGD-FIKVNVGDENTKGWSVAQVEELYQTPDGA 138
Query: 221 PYFTAQWYYRARDTVIESNAHLIDQRRVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAK 280
W+Y A D ++ + + +L + A+
Sbjct: 139 RMMRVHWFYAAHDAATSL---------IYTKQKAGGKKAAAALSRLAVDGFDERQVFRAR 189
Query: 281 KLAIPHCDYYCDMM-------YLLPYST-------FFSLPPENKRVSSETSSTISSDVDA 326
+ +Y DM+ Y+ P + ++S + + ++ E + ++
Sbjct: 190 DNRLYQHEYLIDMLECKVEVVYVQPQTAPPAGCQFWWSFEFDRRFLTFEVPAHVAKQQRE 249
Query: 327 NECEVGEPQKMDVKL--LDLYSGCGAMSTGLCLGANL--------AGLNLVTRWAVDINE 376
+ +K V L +DLY G G + G +L AG+ T WA D E
Sbjct: 250 RFLAARKGKKAPVVLRGMDLYVGAGGL--GYLDHISLLEDGRPDPAGVQTRTDWACDYEE 307
Query: 377 YACQSLKLN 385
++ K N
Sbjct: 308 DMARTFKAN 316
>gi|384244940|gb|EIE18436.1| S-adenosyl-L-methionine-dependent methyltransferase, partial
[Coccomyxa subellipsoidea C-169]
Length = 418
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 117/188 (62%), Gaps = 2/188 (1%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
DVD + GGPPCQGVSG NR + + + D +N+Q+ F D++++ +P +VLMENV+DI K
Sbjct: 1 DVDAVMGGPPCQGVSGLNRHAKRADIVNDPRNRQVQAFYDVIEWFQPGYVLMENVLDIFK 60
Query: 582 FAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQP-TEKLPPYALPTH 640
G+ ++A +RL+ M YQ R+G +AA +G PQ R R F+WGA+ E+LP + P+H
Sbjct: 61 KQDGMYAKFAASRLLNMRYQTRLGCIAACDHGAPQGRWRAFMWGAKAGVEQLPAFPEPSH 120
Query: 641 DVVLRGVIPTEFERNTVAYDEGQQAELARKLL-LQDAISDLPSVDNYESRDEIPYDREPE 699
V +G +P V + + AR+++ + D +SDLP + NY + + Y +P+
Sbjct: 121 FAVFQGGVPHSASECIVGFTSEASRDAARQMVFMGDVLSDLPEISNYTTAEAAQYASDPK 180
Query: 700 TEFQCFIR 707
T +Q ++R
Sbjct: 181 TPYQMWLR 188
>gi|159461698|gb|ABW96888.1| MET1-type DNA-methyltransferase [Elaeis guineensis]
Length = 1543
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/198 (40%), Positives = 110/198 (55%), Gaps = 7/198 (3%)
Query: 513 KSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVL 572
K K LP+PG+VD I GGPPCQG SG NRF + + + + ++ F+ ++ +P+F L
Sbjct: 1191 KLKNLPMPGEVDFINGGPPCQGFSGMNRF--SQSTWSKVQCEMILAFLSFAEYFRPRFFL 1248
Query: 573 MENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKL 632
+ENV + V F KG R LA L++M YQVR G++ AGAYG+PQ R R F+W A P E L
Sbjct: 1249 LENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAYGVPQSRKRAFIWAASPKETL 1308
Query: 633 PPYALPTHDVV---LRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESR 689
P + P H L+ +P V G R + ++D I DLP V N S+
Sbjct: 1309 PEWPEPMHVFASPELKITMPGGVHYAAVRSTSGGAP--FRSITVRDTIGDLPPVPNGASK 1366
Query: 690 DEIPYDREPETEFQCFIR 707
I Y EP + FQ IR
Sbjct: 1367 PTIKYGSEPVSWFQKLIR 1384
Score = 46.6 bits (109), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 74/166 (44%), Gaps = 26/166 (15%)
Query: 240 AHLIDQRRVFFSEIQNDNPLE-----CLVKKLNIARVPLNIDLEAKKLAIPHCDYYCD-- 292
A+ D R V++SE P+E C V+K N +P N+D + CDY D
Sbjct: 995 AYCSDIREVYYSEEIISVPVEMIEGKCEVRKRN--DLP-NLDFPVVIDHVFFCDYSYDPV 1051
Query: 293 --MMYLLPYSTFFSLPPENKRVSSETSSTISSDVDANECEVGEPQKMD-------VKLLD 343
+ LP + F+ +R S+ T E E K+ + LD
Sbjct: 1052 KGALNQLPANVKFT--SLTRRASNTTRKKNKGKEKCKEGEQDGSDKLKDMAQENRLATLD 1109
Query: 344 LYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPET 389
+++GCG +S GL +G++ T+WA++ + A ++ NHPET
Sbjct: 1110 IFAGCGGLSAGL----QQSGVSF-TKWAIEYEQPAGEAFSENHPET 1150
>gi|2895087|gb|AAC39355.1| Met1-type cytosine DNA-methyltransferase [Daucus carota]
Length = 1545
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/196 (41%), Positives = 108/196 (55%), Gaps = 7/196 (3%)
Query: 515 KILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLME 574
K LPLPG VD I GGPPCQG SG NRF + + + + ++ F+ D+ +PK+ L+E
Sbjct: 1196 KNLPLPGQVDFINGGPPCQGFSGMNRFNQ--SSWSKVQCEMILAFLSFADYYRPKYFLLE 1253
Query: 575 NVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPP 634
NV V F KG R A+A L+ M YQVR G++ AGAYG+PQ R R F+W A P E LP
Sbjct: 1254 NVRTFVSFNKGQTFRLAIASLLDMGYQVRFGILEAGAYGVPQSRKRAFIWAASPEETLPE 1313
Query: 635 YALPTHDVV---LRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDE 691
+ P H L+ +P + A Q R + ++D I DLP V N SR
Sbjct: 1314 WPEPMHVFAAPELKIALPE--NKYYAAVRSTQTGAPFRSITVRDTIGDLPMVSNGASRTS 1371
Query: 692 IPYDREPETEFQCFIR 707
I Y +P + FQ IR
Sbjct: 1372 IEYQMDPISWFQKKIR 1387
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 94/206 (45%), Gaps = 39/206 (18%)
Query: 207 ICKIVEMF------EAVDGTPYFTAQWYYRARDTVIESNAHLIDQRRVFFSEIQNDNPLE 260
IC+++E+ +A + + +YR D + + A+ D R V++SE + E
Sbjct: 964 ICQLLEIIVPKAPKQAEPHSTEIKVRRFYRPED-ISDEKAYCSDIREVYYSEETHTIDAE 1022
Query: 261 CLVKKLNIARVPLNIDLEAKKLAIPHCD--------YYCDMMYLLPYSTFFSLPPENK-R 311
+ + + KK +P CD ++C+ +Y + LPP K R
Sbjct: 1023 TVEGRCEVR----------KKNDLPSCDAPTIFDHVFFCEYLYDPAKGSLKQLPPNIKLR 1072
Query: 312 VSSETSSTISS-DVDANECEVGEPQKMDVK-------LLDLYSGCGAMSTGLCLGANLAG 363
S+ + +SS + +C+ GE +K LD+++GCG +S GL +G
Sbjct: 1073 YSAVKGAHVSSLRKNKGKCKEGEDDLDSLKSKVNCLATLDIFAGCGGLSEGL----QKSG 1128
Query: 364 LNLVTRWAVDINEYACQSLKLNHPET 389
+ T+WA++ E A + KLNHPE+
Sbjct: 1129 V-CTTKWAIEYEEAAGDAFKLNHPES 1153
>gi|116062016|dbj|BAF34636.1| DNA methyltransferase 1b [Brassica rapa]
Length = 1519
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/200 (39%), Positives = 116/200 (58%), Gaps = 3/200 (1%)
Query: 513 KSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVL 572
+ + LPLPG VD I GGPPCQG SG NRF +P + + + ++ F+ VD+ +P++ L
Sbjct: 1165 QKRTLPLPGQVDFINGGPPCQGFSGMNRF--SQSPWSKIQCQMVLAFLSFVDYFRPRYFL 1222
Query: 573 MENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKL 632
+ENV + V ++KG + + LA L++M YQVR G++ AGAYG+ Q R R F+W A P E L
Sbjct: 1223 LENVRNFVSYSKGQMFKLTLASLLEMGYQVRFGVLEAGAYGVSQSRKRAFIWAAAPEEVL 1282
Query: 633 PPYALPTHDVVLRGV-IPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDE 691
P + P H + + I A QQ R + ++D I DLP V+N ES +
Sbjct: 1283 PEWPEPMHVFNVSQLNISLSKGLRYAAVRSTQQGAPFRPITVRDTIGDLPPVENGESNID 1342
Query: 692 IPYDREPETEFQCFIRLRKD 711
Y+ +P + FQ IR K+
Sbjct: 1343 KEYETDPVSWFQKEIRGNKN 1362
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 95/207 (45%), Gaps = 38/207 (18%)
Query: 207 ICKIVEMF---EAVDGTPYFTAQWYYRARDTVIESNAHLIDQRRVFFSEIQNDNPLECLV 263
+C++VE+ ++ G+ + +YR D V E A+ D R V++SE E L
Sbjct: 936 VCQLVEIIVPKKSRKGSFEVNVRRFYRPED-VSERKAYASDIREVYYSEDTFVVQPEALK 994
Query: 264 KKLNIARVPLNIDLEAKKLAIPHCD--------YYCDMMY--------LLPYSTF--FSL 305
K + KK +P C ++C+ +Y LP ST +S
Sbjct: 995 GKCEVR----------KKKDMPSCSEFPISENIFFCEQIYDPSKGSVKQLPLSTKPKYST 1044
Query: 306 PPENKRVSSETSSTISSDVDANECEVGE-PQKMDVKLLDLYSGCGAMSTGLCLGANLAGL 364
++ + + + S+ + + E P++M + LD+++GCG +S GL AG+
Sbjct: 1045 VKDDALLRKKKGKGVESETGSGIVKPDELPKEMRLATLDIFAGCGGLSQGL----EQAGV 1100
Query: 365 NLVTRWAVDINEYACQSLKLNHPETEV 391
+ T+WA++ A ++ + NHPET V
Sbjct: 1101 S-ATKWAIEYEGPAGEAFRKNHPETTV 1126
>gi|357626147|gb|EHJ76342.1| DNA cytosine-5 methyltransferase [Danaus plexippus]
Length = 1363
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 80/209 (38%), Positives = 118/209 (56%), Gaps = 4/209 (1%)
Query: 509 THGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKP 568
TH +P+ G+V+++CGGPPCQG SG NRF +++ ++ KN + ++ DF +P
Sbjct: 967 THSAGGLRIPMQGEVELLCGGPPCQGFSGMNRFNSRE--YSNFKNSLVASYLSFCDFYRP 1024
Query: 569 KFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQP 628
K+ ++ENV + V F KG++ + L L+ M YQ G++ AG YG+PQ R R+ + A P
Sbjct: 1025 KYFILENVRNFVAFKKGMVLKLTLRALLDMGYQCTFGILQAGNYGVPQTRRRLIILAAAP 1084
Query: 629 TEKLPPYALPTHDVVLRG--VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNY 686
KLP Y PTH R + T + V + ++ R +QDA+SDLP + N
Sbjct: 1085 GYKLPLYPEPTHVFSRRACSLTTTIDGKRFVTNIQWDESAPRRTCTIQDAMSDLPQICNG 1144
Query: 687 ESRDEIPYDREPETEFQCFIRLRKDGKKL 715
+R EI Y PET FQ IR R + KL
Sbjct: 1145 ANRIEIDYGCMPETYFQRLIRSRDESAKL 1173
>gi|302760531|ref|XP_002963688.1| hypothetical protein SELMODRAFT_80009 [Selaginella moellendorffii]
gi|300168956|gb|EFJ35559.1| hypothetical protein SELMODRAFT_80009 [Selaginella moellendorffii]
Length = 1471
Score = 150 bits (379), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 110/193 (56%), Gaps = 5/193 (2%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP PG+VD I GGPPCQG SG NRF NK N + + + ++ F+ D+ +P++ L+ENV
Sbjct: 1125 LPRPGEVDFISGGPPCQGFSGMNRF-NKRN-WSKIQCEMVLGFLSYADYFRPRYFLLENV 1182
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F KG R LA L++M YQVR G++ AG YG+ Q R R +W A P E LP +
Sbjct: 1183 RNFVSFNKGQTFRLTLASLLEMGYQVRFGILQAGHYGISQSRTRAIIWAAAPDEVLPDWP 1242
Query: 637 LPTHDVVLRGVIPTEFERNTV--AYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPY 694
P H V + N+V A D+ + R + ++D I DLP V N + E PY
Sbjct: 1243 EPVH-VFASAQLKIPLSGNSVYAAADDTRGGAPLRSITVRDTIGDLPPVANGTEKPETPY 1301
Query: 695 DREPETEFQCFIR 707
EP++ FQ IR
Sbjct: 1302 GNEPQSWFQKNIR 1314
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 87/194 (44%), Gaps = 18/194 (9%)
Query: 207 ICKIVEMF-EAVDGTPYFTAQWYYRARDTVIESNAHLIDQRRVFFSEIQNDNPLECLVKK 265
IC+++++ + G T + +YR D + A+ D V+F E L + K
Sbjct: 898 ICQLMDVIPSSKTGAEQLTVRKFYRPEDVDL-GKAYKADVHEVYFCERTTTISLAAVRGK 956
Query: 266 LNIA-RVPLNIDLEAKKLAIPHCDYYCDMMYLLPYSTFFSLPPENKRVSSETSSTISS-- 322
+ R + E K L ++C +Y T LP K +S+++S
Sbjct: 957 CTVVKRQEFTVASETKALMDL---FFCSCVYDPLKGTVKQLPANVKLGKPPVASSLASAK 1013
Query: 323 ---DVDANECEVGEPQKMDVKL--LDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEY 377
+ ++ + E D KL LD+++GCG +S G+ + +G+ T+WA++ +
Sbjct: 1014 GKGKLVEDDRQPKETSANDEKLSMLDIFAGCGGLSEGI----HQSGI-ASTKWAIEYDHA 1068
Query: 378 ACQSLKLNHPETEV 391
A ++ K+NHP V
Sbjct: 1069 AAEAFKMNHPTATV 1082
>gi|302786012|ref|XP_002974777.1| hypothetical protein SELMODRAFT_232368 [Selaginella moellendorffii]
gi|300157672|gb|EFJ24297.1| hypothetical protein SELMODRAFT_232368 [Selaginella moellendorffii]
Length = 1335
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 110/193 (56%), Gaps = 5/193 (2%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP PG+VD I GGPPCQG SG NRF NK N + + + ++ F+ D+ +P++ L+ENV
Sbjct: 989 LPRPGEVDFISGGPPCQGFSGMNRF-NKRN-WSKIQCEMVLGFLSYADYFRPRYFLLENV 1046
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F KG R LA L++M YQVR G++ AG YG+ Q R R +W A P E LP +
Sbjct: 1047 RNFVSFNKGQTFRLTLASLLEMGYQVRFGILQAGHYGISQSRTRAIIWAAAPDEVLPDWP 1106
Query: 637 LPTHDVVLRGVIPTEFERNTV--AYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPY 694
P H V + N+V A D+ + R + ++D I DLP V N + E PY
Sbjct: 1107 EPVH-VFASAQLKIPLSGNSVYAAADDTRGGAPLRSITVRDTIGDLPPVANGTEKPETPY 1165
Query: 695 DREPETEFQCFIR 707
EP++ FQ IR
Sbjct: 1166 GNEPQSWFQKNIR 1178
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 84/197 (42%), Gaps = 24/197 (12%)
Query: 207 ICKIVEMF-EAVDGTPYFTAQWYYRARDTVIESNAHLIDQRRVFFSEIQNDNPLECLVKK 265
IC+++++ + G T + +YR D + A+ D V+F E L + K
Sbjct: 762 ICQLMDIIPSSKTGAEQLTVRKFYRPEDVDL-GKAYKADVHEVYFCERTTTISLAAVRGK 820
Query: 266 LNIA-RVPLNIDLEAKKLAIPHCDYYCDMMY--------LLPYSTFFSLPPENKRVSSET 316
+ R + E K L ++C +Y LP + PP ++S
Sbjct: 821 CTVVKRQEFTVASETKALMDL---FFCSCVYDPLKGTVKQLPANVKLGKPPAASSLASAK 877
Query: 317 SS--TISSDVDANECEVGEPQKMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDI 374
+ D E + + + +LD+++GCG +S G+ + +G+ T+WA++
Sbjct: 878 GKGKLVEDDRQPKETSANDEK---LSMLDIFAGCGGLSEGI----HQSGIA-STKWAIEY 929
Query: 375 NEYACQSLKLNHPETEV 391
+ A ++ K+NHP V
Sbjct: 930 DHAAAEAFKMNHPTATV 946
>gi|233770212|gb|ACQ91179.1| Met1-type cytosine DNA-methyltransferase [Fragaria x ananassa]
Length = 1557
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 78/195 (40%), Positives = 113/195 (57%), Gaps = 9/195 (4%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LPLPG VD I GGPPCQG SG NRF + + + + ++ F+ D+ +PK+ L+ENV
Sbjct: 1206 LPLPGQVDFINGGPPCQGFSGMNRFNT--STWSKVQCEMILAFLSFADYFRPKYFLLENV 1263
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F KG R LA L++M YQVR G++ AGAYG+ Q R R F+W A P E LP +
Sbjct: 1264 RNFVAFNKGQTFRLTLASLLEMGYQVRFGILEAGAYGVSQSRKRAFIWAAAPDEILPEWP 1323
Query: 637 LPTHDVVLRGVIPTEFERNTVAYDEGQQAELA----RKLLLQDAISDLPSVDNYESRDEI 692
P H + GV + ++ +Y ++ + R + ++D I DLP+V N S+ I
Sbjct: 1324 EPMH---VFGVPELKINLSSNSYYAAVRSTASGAPFRPITVRDTIGDLPAVGNGASKVNI 1380
Query: 693 PYDREPETEFQCFIR 707
Y+ +P + FQ IR
Sbjct: 1381 EYESDPVSWFQKKIR 1395
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 91/180 (50%), Gaps = 29/180 (16%)
Query: 228 YYRARDTVIESNAHLIDQRRVFFSEIQNDNPLECLVKKLNIARVPLNIDL-EAKKLAIPH 286
++R D +E A+ D R V++SE + P++ + K + R DL E A+
Sbjct: 997 FFRPEDISVE-KAYCSDVREVYYSEELHILPVDSIEGKCEVRR---RSDLPECNAPALFQ 1052
Query: 287 CDYYCDMMYLLPYSTFFSLPPENKRVSSETSSTISSDVDA----NECEVGE--------- 333
++C+ +Y P + P N RV ST+ D ++ +C+ GE
Sbjct: 1053 HIFFCEHLYD-PSNGSLKQLPANIRVKY---STVGGDTESRKRKGKCKEGEDVPEVEQQR 1108
Query: 334 --PQKMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEV 391
+ M + LD+++GCG +S GL + AG++ +T+WA++ E A Q+ +LNHPE++V
Sbjct: 1109 VDSEHMRLATLDIFAGCGGLSEGL----HQAGVS-ITKWAIEYEEPAGQAFQLNHPESKV 1163
>gi|357115052|ref|XP_003559306.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1A-like [Brachypodium
distachyon]
Length = 1528
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 79/198 (39%), Positives = 111/198 (56%), Gaps = 7/198 (3%)
Query: 513 KSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVL 572
K K LP+PG+V+ I GGPPCQG SG NRF +P + + + ++ F+ ++ +P+F L
Sbjct: 1179 KIKNLPVPGEVEFINGGPPCQGFSGMNRFNQ--SPWSKVQCEMILAFLSFAEYFRPRFFL 1236
Query: 573 MENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKL 632
+ENV + V F KG R LA L++M YQVR G++ AGAYG+ Q R R F+W A P E L
Sbjct: 1237 LENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAYGVAQSRKRAFIWAAAPGETL 1296
Query: 633 PPYALPTHDVV---LRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESR 689
P + P H L+ +P + A R + ++D I DLP V+N S+
Sbjct: 1297 PDWPEPMHVFASPELKITLPD--GKYYAAAKSTAGGAPFRSITVRDTIGDLPPVENGASK 1354
Query: 690 DEIPYDREPETEFQCFIR 707
I Y EP + FQ IR
Sbjct: 1355 PTIQYGSEPISWFQKKIR 1372
Score = 46.6 bits (109), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 97/242 (40%), Gaps = 31/242 (12%)
Query: 179 MWAEVDGHITYDLFDDAHVKAESGEEDYICKIVEMFEAVDGT-------PYFTAQWYYRA 231
++ VDGH TY + +K Y+ + A G+ + + YR
Sbjct: 925 FFSRVDGHETYKAGRNVGLKP------YVVCHLHSINAPAGSKKVNPESTKVSVRRLYRP 978
Query: 232 RDTVIESNAHLIDQRRVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLAIPHCDYYC 291
D + + A+ D R V++SE P+ + K + N+ + + H +YC
Sbjct: 979 -DDISSARAYSSDIREVYYSEDMLSVPVAMIEGKCEVT-TKNNLPDSNLPVVVDHV-FYC 1035
Query: 292 DMMYLLPYSTFFSLPPENKRVSSETSSTIS----------SDVDANECEVGEPQKMDVKL 341
+ +Y L K ++ + S SD ++ + + +
Sbjct: 1036 EYLYDPDTGALKQLQSNVKLMTIARKAPTSKKNKGKQICDSDQAGSDKQKAAASENSLAT 1095
Query: 342 LDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLT 401
LD+++GCG +S GL L+G + T+WA++ E A Q+ NHPE V E+ L
Sbjct: 1096 LDIFAGCGGLSEGL----QLSGASH-TKWAIEYEEPAGQAFGENHPEAAVFVENCNVILK 1150
Query: 402 LL 403
+
Sbjct: 1151 AI 1152
>gi|2895089|gb|AAC39356.1| Met2-type cytosine DNA-methyltransferase [Daucus carota]
Length = 1761
Score = 149 bits (376), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 80/201 (39%), Positives = 110/201 (54%), Gaps = 16/201 (7%)
Query: 515 KILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLME 574
K LPLPG VD I GGPPCQG SG NRF + + + + ++ F+ D+ +PK+ L+E
Sbjct: 1411 KNLPLPGQVDFINGGPPCQGFSGMNRFNQ--SSWSKVQCEMILAFLSFADYYRPKYFLLE 1468
Query: 575 NVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPP 634
NV + V F KG R A+A L++M YQVR G++ AGA+G+PQ R R F+W A P E LP
Sbjct: 1469 NVRNFVSFNKGQTFRLAIASLLEMGYQVRFGILEAGAFGVPQSRKRAFIWAASPEETLPG 1528
Query: 635 --------YALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNY 686
+A P V L G ++ A Q R + ++D I DLP V N
Sbjct: 1529 SWPEPMHVFAAPELKVALPG------NKHYAAVRSTQAGAPFRAITVRDTIGDLPMVTNG 1582
Query: 687 ESRDEIPYDREPETEFQCFIR 707
S+ + Y +P + FQ IR
Sbjct: 1583 ASKTTLEYRCDPISWFQKNIR 1603
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 93/208 (44%), Gaps = 39/208 (18%)
Query: 207 ICKIVEMF------EAVDGTPYFTAQWYYRARDTVIESNAHLIDQRRVFFSEIQNDNPLE 260
IC+++E+ +A D + + +YR D + + A+ D R V++SE + +E
Sbjct: 1179 ICQLLEVVVPKKPQQADDSSTEVKVRRFYRPED-ISDEKAYCSDIREVYYSEETHTLLVE 1237
Query: 261 CLVKKLNIARVPLNIDLEAKKLAIPHCD--------YYCDMMYLLPYSTFFSLPPENKRV 312
+ + + KK +P CD +YC+ +Y + LP K
Sbjct: 1238 AIEGRCEVR----------KKSDLPTCDAPTIYEHVFYCEYLYDPHKGSLKQLPSNIKLR 1287
Query: 313 SSETSSTISSDVDANE--CEVGE-------PQKMDVKLLDLYSGCGAMSTGLCLGANLAG 363
S S + N+ C+ GE ++ + LD+++GCG +S GL +G
Sbjct: 1288 YSTVKGAYDSSLRKNKGKCKEGEDDLEAEKSKENCLATLDIFAGCGGLSEGL----QQSG 1343
Query: 364 LNLVTRWAVDINEYACQSLKLNHPETEV 391
+ T+WA++ E A + KLNHP+T +
Sbjct: 1344 V-CRTKWAIEYEEPAGDAFKLNHPDTTM 1370
>gi|16755865|gb|AAL28120.1|AF433679_1 putative chromomethylase MTH2 [Triticum aestivum]
Length = 90
Score = 149 bits (376), Expect = 6e-33, Method: Composition-based stats.
Identities = 60/90 (66%), Positives = 78/90 (86%)
Query: 525 VICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAK 584
++CGGPPCQG+SG NRFRN + PL D++NKQL+VFMD+V++L+PK+VLMENVVDI+KFA
Sbjct: 1 MVCGGPPCQGISGLNRFRNYNEPLEDDRNKQLVVFMDVVNYLRPKYVLMENVVDILKFAD 60
Query: 585 GLLGRYALARLIQMNYQVRMGMMAAGAYGL 614
G LGRYAL+RL+ M Q R+G+M AG YG+
Sbjct: 61 GFLGRYALSRLVSMRCQARLGLMVAGCYGV 90
>gi|233770210|gb|ACQ91178.1| Met1-type cytosine DNA-methyltransferase [Fragaria x ananassa]
Length = 1565
Score = 148 bits (374), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 77/195 (39%), Positives = 113/195 (57%), Gaps = 9/195 (4%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LPLPG VD I GGPPCQG SG NRF + + + + ++ F+ D+ +PK+ L+ENV
Sbjct: 1214 LPLPGQVDFINGGPPCQGFSGMNRFNT--STWSKVQCEMILAFLSFADYFRPKYFLLENV 1271
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F KG R LA L++M YQVR G++ AGAYG+ Q R R F+W A P E LP +
Sbjct: 1272 RNFVAFNKGQTFRLTLASLLEMGYQVRFGILEAGAYGVSQSRKRAFIWAAAPDEILPEWP 1331
Query: 637 LPTHDVVLRGVIPTEFERNTVAYDEGQQAELA----RKLLLQDAISDLPSVDNYESRDEI 692
P H + GV + ++ +Y ++ + R + ++D I DLP+V N S+ +
Sbjct: 1332 EPMH---VFGVPELKINLSSNSYYAAVRSTASGAPFRPITVRDTIGDLPAVGNGASKVNM 1388
Query: 693 PYDREPETEFQCFIR 707
Y+ +P + FQ IR
Sbjct: 1389 EYESDPVSWFQKKIR 1403
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 91/180 (50%), Gaps = 29/180 (16%)
Query: 228 YYRARDTVIESNAHLIDQRRVFFSEIQNDNPLECLVKKLNIARVPLNIDL-EAKKLAIPH 286
++R D +E A+ D R V++SE + P++ + K + R DL E A+
Sbjct: 1005 FFRPEDISVE-KAYCSDVREVYYSEELHILPVDSIEGKCEVRR---RSDLPECNAPALFQ 1060
Query: 287 CDYYCDMMYLLPYSTFFSLPPENKRVSSETSSTISSDVDA----NECEVGE--------- 333
++C+ +Y P + P N RV ST+ D ++ +C+ GE
Sbjct: 1061 HIFFCEHLYD-PSNGSLKQLPANIRVKY---STVGGDTESRKRKGKCKEGEDVPEVEQQR 1116
Query: 334 --PQKMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEV 391
+ M + LD+++GCG +S GL + AG++ +T+WA++ E A Q+ +LNHPE++V
Sbjct: 1117 VDSEHMRLATLDIFAGCGGLSEGL----HQAGVS-ITKWAIEYEEPAGQAFQLNHPESKV 1171
>gi|260806879|ref|XP_002598311.1| hypothetical protein BRAFLDRAFT_204680 [Branchiostoma floridae]
gi|229283583|gb|EEN54323.1| hypothetical protein BRAFLDRAFT_204680 [Branchiostoma floridae]
Length = 1275
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/206 (38%), Positives = 113/206 (54%), Gaps = 4/206 (1%)
Query: 504 IKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIV 563
+ E T + LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+
Sbjct: 858 VMEGATTNSTGQRLPQKGDVELLCGGPPCQGFSGMNRFNSRQ--YSQFKNSLVVSFLSYC 915
Query: 564 DFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFL 623
DF +PKF L+ENV + V F ++ + L LI+M YQ G++ AG YG+ Q R R +
Sbjct: 916 DFYRPKFFLLENVRNFVSFKSSMVLKLTLRCLIRMGYQCTFGVLQAGNYGVAQTRRRAII 975
Query: 624 WGAQPTEKLPPYALPTHDVVLRGVIPTEF--ERNTVAYDEGQQAELARKLLLQDAISDLP 681
A P EKLP Y P H R + E+ + + +Q+ R + ++D +SDLP
Sbjct: 976 LAAAPGEKLPMYPEPQHVFSPRACQLSVMVDEKKYNSNTQWRQSAPYRTITIRDTMSDLP 1035
Query: 682 SVDNYESRDEIPYDREPETEFQCFIR 707
S+ N S EI YD EP + FQ IR
Sbjct: 1036 SIRNGHSATEISYDGEPRSYFQKIIR 1061
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 49/85 (57%), Gaps = 5/85 (5%)
Query: 321 SSDVDANECEVGEPQKMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQ 380
SS+ ++ E + P +++LD+++GCG +S G + AG+ ++WAV++ E A Q
Sbjct: 781 SSEAESKEQQPPSPAFTKLRMLDVFAGCGGLSEGF----HQAGI-ADSKWAVEVMEPAAQ 835
Query: 381 SLKLNHPETEVRNESAEDFLTLLRE 405
+ +LN+P+ V + L L+ E
Sbjct: 836 AYRLNNPDCTVFTDDCNILLKLVME 860
>gi|411012963|gb|AFV99138.1| MET-type cytosine DNA-methyltransferase 1 [Malus x domestica]
Length = 1570
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/195 (38%), Positives = 111/195 (56%), Gaps = 9/195 (4%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LPLPG VD I GGPPCQG SG NRF + + + + ++ F+ D+ +PK+ L+ENV
Sbjct: 1221 LPLPGQVDFINGGPPCQGFSGMNRFNQ--STWSKVQCEMILAFLSFADYFRPKYFLLENV 1278
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F KG R +A L++M YQVR G++ AGAYG+ Q R R F+W A P E LP +
Sbjct: 1279 RNFVSFNKGQTFRLTVASLLEMGYQVRFGILEAGAYGVSQSRKRAFIWAAAPDENLPEWP 1338
Query: 637 LPTHDVVLRGVIPTEFERNTVAYDEGQQAELA----RKLLLQDAISDLPSVDNYESRDEI 692
P H + GV + + +Y ++ R + ++D I DLP+V N S+ +
Sbjct: 1339 EPMH---VFGVPELKISLSGNSYYSAVRSTAGGAPFRSITVRDTIGDLPAVGNGASKVNL 1395
Query: 693 PYDREPETEFQCFIR 707
Y+ +P + FQ IR
Sbjct: 1396 EYESDPISWFQKKIR 1410
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 94/209 (44%), Gaps = 40/209 (19%)
Query: 207 ICKIVEMF---EAVDGTPYFT---AQWYYRARDTVIESNAHLIDQRRVFFSE-----IQN 255
+C+++E+ E+ P T + ++R D +E A+ D R V++SE +
Sbjct: 986 VCQVLEIIGTKESKRPGPVSTQVKVRRFFRPEDISVE-KAYGCDIREVYYSEETHIVTVD 1044
Query: 256 DNPLECLVKK---LNIARVPLNIDLEAKKLAIPHCDYYCDMMYLLPYSTFFSLPPENKRV 312
D +C V+K L + P+ + H ++C+ +Y + LP K
Sbjct: 1045 DIEGKCEVRKKSDLPVCNAPVTFE---------HT-FFCEYLYDPSNGSIKQLPATIKLR 1094
Query: 313 SSETSSTISS----------DVDANECEVGEPQKMDVKLLDLYSGCGAMSTGLCLGANLA 362
S + S DV E + + + + LD+++GCG +S GL A
Sbjct: 1095 YSTVGGDVESRKRKGKGKEGDVSEVEKQRADSVQKRLATLDIFAGCGGLSEGL----RQA 1150
Query: 363 GLNLVTRWAVDINEYACQSLKLNHPETEV 391
G++L T+WA++ E A + KLNHPE+ V
Sbjct: 1151 GISL-TKWAIEYEEPAGDAFKLNHPESLV 1178
>gi|296084836|emb|CBI27718.3| unnamed protein product [Vitis vinifera]
Length = 1429
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 104/192 (54%), Gaps = 3/192 (1%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LPLPG VD I GGPPCQG SG NRF + + + + ++ F+ D+ +PKF L+ENV
Sbjct: 1081 LPLPGQVDFINGGPPCQGFSGMNRFNQ--STWSKVQCEMILAFLSFADYFRPKFFLLENV 1138
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F KG R LA L++M YQVR G++ AGAYG+ Q R R F+W A P E LP +
Sbjct: 1139 RNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAYGVSQSRKRAFIWAASPEETLPEWP 1198
Query: 637 LPTHDVVLRGVIPTEFER-NTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYD 695
P H + + T E A R + ++D I DLP V N S + Y
Sbjct: 1199 EPMHVFAVPELKITLSENMQYAAVRSTATGAPFRAITVRDTIGDLPDVKNGASITNLEYQ 1258
Query: 696 REPETEFQCFIR 707
+P + FQ IR
Sbjct: 1259 NDPVSWFQKKIR 1270
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 79/183 (43%), Gaps = 37/183 (20%)
Query: 228 YYRARDTVIESNAHLIDQRRVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLAIPHC 287
++R D E A+ D R V++SE + P+E + K + KK +P C
Sbjct: 870 FFRPEDISAE-KAYCSDIREVYYSEETHSVPVETIEGKCEVM----------KKHDLPPC 918
Query: 288 D--------YYCDMMYLLPYSTFFSLPPE-------NKRVSSETSSTISSDVDANECEVG 332
D ++C+ +Y LP K V + E ++
Sbjct: 919 DVPAIFDHVFFCERLYDPSKGCLKQLPAHIKLRYSARKEVDDAAARKKKGKAKEGENDLE 978
Query: 333 EPQKMD------VKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH 386
+++D + LD+++GCG +S GL +G++ VT+WA++ E A + KLNH
Sbjct: 979 VERQIDAFHENRLATLDIFAGCGGLSEGL----QQSGVS-VTKWAIEYEEPAGDAFKLNH 1033
Query: 387 PET 389
PE+
Sbjct: 1034 PES 1036
>gi|224144433|ref|XP_002325288.1| DNA methyltransferase [Populus trichocarpa]
gi|222862163|gb|EEE99669.1| DNA methyltransferase [Populus trichocarpa]
Length = 1549
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 106/192 (55%), Gaps = 3/192 (1%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LPLPG VD I GGPPCQG SG NRF + + + + ++ F+ D+ +PK+ L+ENV
Sbjct: 1202 LPLPGQVDFINGGPPCQGFSGMNRFNQ--STWSKVQCEMILAFLSFADYFRPKYFLLENV 1259
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F KG R +A L+QM YQVR G++ AGAYG+ Q R R F+W A P E LP +
Sbjct: 1260 RNFVSFNKGQTFRLTIASLLQMGYQVRFGILEAGAYGVSQSRKRAFIWAASPEEILPEWP 1319
Query: 637 LPTHDVVLRGVIPTEFERNT-VAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYD 695
P H + T E++ A R + ++D I DLP V N S+ + Y
Sbjct: 1320 EPMHVFAAPELKITLSEKSQYAAVRSTAYGAPFRAITVRDTIGDLPDVANGASKTNLEYG 1379
Query: 696 REPETEFQCFIR 707
+P + FQ IR
Sbjct: 1380 NDPISWFQKKIR 1391
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 80/186 (43%), Gaps = 37/186 (19%)
Query: 225 AQWYYRARDTVIESNAHLIDQRRVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLAI 284
Q ++R D E A+ D R +++SE + +E + K + KK+ I
Sbjct: 988 VQRFFRPDDISPE-KAYCSDIREIYYSEETHLLSVEVIEGKCEVR----------KKIDI 1036
Query: 285 PHCD--------YYCDMMYLLPYSTFFSLPPENKRVSSETS--STISSDVDANECEVGEP 334
P C ++C+ MY + LP K S S ++S + + GE
Sbjct: 1037 PTCSAPAIFDHTFFCEHMYDPSNGSLKQLPAHIKSKFSAVSKDGDVASRKRKGKSKEGEN 1096
Query: 335 QKMDVK-----------LLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLK 383
D K LD+++GCG +S GL AG++ T+WA++ E A ++ K
Sbjct: 1097 DTEDDKQLEASPEYRLATLDIFAGCGGLSEGL----QQAGVS-TTKWAIEYEEPAGEAFK 1151
Query: 384 LNHPET 389
LNH E+
Sbjct: 1152 LNHAES 1157
>gi|224077654|ref|XP_002305346.1| DNA methyltransferase [Populus trichocarpa]
gi|222848310|gb|EEE85857.1| DNA methyltransferase [Populus trichocarpa]
Length = 1529
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 106/192 (55%), Gaps = 3/192 (1%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LPLPG VD I GGPPCQG SG NRF + + + + ++ F+ D+ +PK+ L+ENV
Sbjct: 1182 LPLPGQVDFINGGPPCQGFSGMNRFNQ--STWSKVQCEMILAFLSFADYFRPKYFLLENV 1239
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F KG R +A L+QM YQVR G++ AGAYG+ Q R R F+W A P E LP +
Sbjct: 1240 RNFVSFNKGQTFRLTIASLLQMGYQVRFGILEAGAYGVSQSRKRAFIWAASPEEILPEWP 1299
Query: 637 LPTHDVVLRGVIPTEFERNTV-AYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYD 695
P H + T E++ A R + ++D I DLP V N S+ + Y
Sbjct: 1300 EPMHVFAAPELKITLSEKSQYSAVRSTAYGAPFRAITVRDTIGDLPDVGNGASKTNLEYG 1359
Query: 696 REPETEFQCFIR 707
+P + FQ IR
Sbjct: 1360 NDPVSWFQKKIR 1371
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 89/207 (42%), Gaps = 44/207 (21%)
Query: 207 ICKIVEMF-----EAVDGTPYFTAQWYYRARDTVIESNAHLIDQRRVFFSEIQNDNPLEC 261
+C+++E+ +A + Q ++R D E A+ D R +++SE + +E
Sbjct: 945 VCQLLEVVLKEPKQAETRSTQVNVQRFFRPDDISPE-KAYCSDIREIYYSEETHLLSVET 1003
Query: 262 LVKKLNIARVPLNIDLEAKKLAIPHCD--------YYCDMMYLLPYSTFFSLPPENK--- 310
+ K + KK IP C ++C+ MY + LP + K
Sbjct: 1004 IEGKCEVR----------KKNDIPTCSAPAIFDNIFFCEHMYDPSKGSLKQLPAQVKSKF 1053
Query: 311 -----------RVSSETSSTISSDVDANECEVGEPQKMDVKLLDLYSGCGAMSTGLCLGA 359
R S +D++A++ P+ + LD+++GCG +S GL
Sbjct: 1054 SAVSRDGDVASRKRKGKSKEGENDIEADKQREASPENR-LATLDIFAGCGGLSEGL---- 1108
Query: 360 NLAGLNLVTRWAVDINEYACQSLKLNH 386
AG++ T+WA++ E A ++ KLNH
Sbjct: 1109 QQAGVS-STKWAIEYEEPAGEAFKLNH 1134
>gi|359480931|ref|XP_002267284.2| PREDICTED: DNA (cytosine-5)-methyltransferase 1B-like [Vitis
vinifera]
Length = 1530
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 105/192 (54%), Gaps = 3/192 (1%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LPLPG VD I GGPPCQG SG NRF + + + + ++ F+ D+ +P+F L+ENV
Sbjct: 1187 LPLPGQVDFINGGPPCQGFSGMNRFNQ--STWSKVQCEMILAFLSFADYFRPRFFLLENV 1244
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F KG R +A L++M YQVR G++ AGAYG+ Q R RVF+W A P E LP +
Sbjct: 1245 RNFVSFNKGQTFRLTVASLLEMGYQVRFGILEAGAYGVSQSRKRVFIWAASPEETLPEWP 1304
Query: 637 LPTHDVVLRGV-IPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYD 695
P H + + I A R + ++D I DLP+V N S+ + Y
Sbjct: 1305 EPMHVFAVPELKITLSKNMQYAAVRSTATGAPFRAITVRDTIGDLPAVTNGASKTGLEYQ 1364
Query: 696 REPETEFQCFIR 707
P + FQ IR
Sbjct: 1365 NGPVSWFQKKIR 1376
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 83/185 (44%), Gaps = 37/185 (20%)
Query: 228 YYRARDTVIESNAHLIDQRRVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLAIPHC 287
++R D E A+ D R VF+SE + P+E + K + +K +P C
Sbjct: 976 FFRPEDISAE-KAYTSDIREVFYSEETHFVPVEMIEGKCEVI----------QKHDLPSC 1024
Query: 288 D--------YYCDMMYLLPYSTFFSLPPENKRVSSETSST--ISSDVDANECEVGEP--- 334
D ++C+ ++ + LP K S + ++ + +VGE
Sbjct: 1025 DVLATFEHIFFCEHLFEPSKGSLKQLPVHIKMRYSARKAVDDAATRKRKGKGKVGEDDLK 1084
Query: 335 --------QKMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH 386
Q+ + LD+++GCG +S GL +G++ VT+WA++ E A + KLNH
Sbjct: 1085 VERQKTAFQENCLATLDIFAGCGGLSEGL----QQSGVS-VTKWAIEYEEPAGDAFKLNH 1139
Query: 387 PETEV 391
PE+ +
Sbjct: 1140 PESSM 1144
>gi|225463167|ref|XP_002267200.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1B-like [Vitis
vinifera]
Length = 1549
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 104/192 (54%), Gaps = 3/192 (1%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LPLPG VD I GGPPCQG SG NRF + + + + ++ F+ D+ +PKF L+ENV
Sbjct: 1201 LPLPGQVDFINGGPPCQGFSGMNRFNQ--STWSKVQCEMILAFLSFADYFRPKFFLLENV 1258
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F KG R LA L++M YQVR G++ AGAYG+ Q R R F+W A P E LP +
Sbjct: 1259 RNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAYGVSQSRKRAFIWAASPEETLPEWP 1318
Query: 637 LPTHDVVLRGVIPTEFER-NTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYD 695
P H + + T E A R + ++D I DLP V N S + Y
Sbjct: 1319 EPMHVFAVPELKITLSENMQYAAVRSTATGAPFRAITVRDTIGDLPDVKNGASITNLEYQ 1378
Query: 696 REPETEFQCFIR 707
+P + FQ IR
Sbjct: 1379 NDPVSWFQKKIR 1390
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 79/183 (43%), Gaps = 37/183 (20%)
Query: 228 YYRARDTVIESNAHLIDQRRVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLAIPHC 287
++R D E A+ D R V++SE + P+E + K + KK +P C
Sbjct: 990 FFRPEDISAE-KAYCSDIREVYYSEETHSVPVETIEGKCEVM----------KKHDLPPC 1038
Query: 288 D--------YYCDMMYLLPYSTFFSLPPE-------NKRVSSETSSTISSDVDANECEVG 332
D ++C+ +Y LP K V + E ++
Sbjct: 1039 DVPAIFDHVFFCERLYDPSKGCLKQLPAHIKLRYSARKEVDDAAARKKKGKAKEGENDLE 1098
Query: 333 EPQKMD------VKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH 386
+++D + LD+++GCG +S GL +G++ VT+WA++ E A + KLNH
Sbjct: 1099 VERQIDAFHENRLATLDIFAGCGGLSEGL----QQSGVS-VTKWAIEYEEPAGDAFKLNH 1153
Query: 387 PET 389
PE+
Sbjct: 1154 PES 1156
>gi|75233438|sp|Q7Y1I7.1|DNM1A_ORYSJ RecName: Full=DNA (cytosine-5)-methyltransferase 1A; Short=OsMET1a;
AltName: Full=DNA methyltransferase 1-1; Short=OsMET1-1
gi|31126751|gb|AAP44671.1| putative DNA (cytosine-5-)-methyltransferase [Oryza sativa Japonica
Group]
gi|171196101|dbj|BAG15928.1| putative cytosine-5 DNA methyltransferase [Oryza sativa Japonica
Group]
gi|222625970|gb|EEE60102.1| hypothetical protein OsJ_12965 [Oryza sativa Japonica Group]
Length = 1527
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/198 (38%), Positives = 110/198 (55%), Gaps = 7/198 (3%)
Query: 513 KSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVL 572
K K LP+PG+V+ I GGPPCQG SG NRF +P + + + ++ F+ ++ +P+F L
Sbjct: 1178 KIKNLPVPGEVEFINGGPPCQGFSGMNRFNQ--SPWSKVQCEMILAFLSFAEYFRPRFFL 1235
Query: 573 MENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKL 632
+ENV + V F KG R LA L++M YQVR G++ AGAYG+ Q R R F+W A P E L
Sbjct: 1236 LENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAYGVAQSRKRAFIWAAAPGETL 1295
Query: 633 PPYALPTHDVV---LRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESR 689
P + P H L+ +P + A R + ++D I DLP+V+N +
Sbjct: 1296 PEWPEPMHVFASPELKITLPD--GKFYAAVKSTAAGAPFRSITVRDTIGDLPAVENGAGK 1353
Query: 690 DEIPYDREPETEFQCFIR 707
I Y P + FQ IR
Sbjct: 1354 PTIQYGSGPVSWFQKKIR 1371
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 85/188 (45%), Gaps = 22/188 (11%)
Query: 228 YYRARDTVIESNAHLIDQRRVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKL-AIPH 286
+YR D + + A+ D R V++SE P+ + K V L DL L A+
Sbjct: 974 FYRP-DDISSTKAYSSDIREVYYSEDIISVPVVMIEGK---CEVRLKDDLPNSDLPAVVE 1029
Query: 287 CDYYCDMMYLLPYSTFFSLPPENKRVSSETSSTISSDVDANE--CEV---GEPQKMD--- 338
+ C+ +Y LPP N R+ + T +S + + C++ G + D
Sbjct: 1030 HVFCCEYLYDPANGALKQLPP-NVRLVTLTRKVPASKKNKGKQICDIELGGSDKPKDGQS 1088
Query: 339 ---VKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNES 395
+ LD+++GCG +S GL +GL+L T+WA++ E A + NHPE V E+
Sbjct: 1089 ENCLATLDIFAGCGGLSEGL----QRSGLSL-TKWAIEYEEPAGDAFGENHPEAAVFVEN 1143
Query: 396 AEDFLTLL 403
L +
Sbjct: 1144 CNVILKAI 1151
>gi|218193912|gb|EEC76339.1| hypothetical protein OsI_13909 [Oryza sativa Indica Group]
Length = 1527
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/198 (38%), Positives = 110/198 (55%), Gaps = 7/198 (3%)
Query: 513 KSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVL 572
K K LP+PG+V+ I GGPPCQG SG NRF +P + + + ++ F+ ++ +P+F L
Sbjct: 1178 KIKNLPVPGEVEFINGGPPCQGFSGMNRFNQ--SPWSKVQCEMILAFLSFAEYFRPRFFL 1235
Query: 573 MENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKL 632
+ENV + V F KG R LA L++M YQVR G++ AGAYG+ Q R R F+W A P E L
Sbjct: 1236 LENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAYGVAQSRKRAFIWAAAPGETL 1295
Query: 633 PPYALPTHDVV---LRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESR 689
P + P H L+ +P + A R + ++D I DLP+V+N +
Sbjct: 1296 PEWPEPMHVFASPELKITLPD--GKFYAAVKSTAAGAPFRSITVRDTIGDLPAVENGAGK 1353
Query: 690 DEIPYDREPETEFQCFIR 707
I Y P + FQ IR
Sbjct: 1354 PTIQYGSGPVSWFQKKIR 1371
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 85/188 (45%), Gaps = 22/188 (11%)
Query: 228 YYRARDTVIESNAHLIDQRRVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKL-AIPH 286
+YR D + + A+ D R V++SE P+ + K V L DL L A+
Sbjct: 974 FYRP-DDISSTKAYSSDIREVYYSEDIISVPVVMIEGK---CEVRLKDDLPNSDLPAVVE 1029
Query: 287 CDYYCDMMYLLPYSTFFSLPPENKRVSSETSSTISSDVDANE--CEV---GEPQKMD--- 338
+ C+ +Y LPP N R+ + T +S + + C++ G + D
Sbjct: 1030 HVFCCEYLYDPANGALKQLPP-NVRLVTLTRKVPASKKNKGKQICDIELGGSDKPKDGQS 1088
Query: 339 ---VKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNES 395
+ LD+++GCG +S GL +GL+L T+WA++ E A + NHPE V E+
Sbjct: 1089 ENCLATLDIFAGCGGLSEGL----QRSGLSL-TKWAIEYEEPAGDAFGENHPEAAVFVEN 1143
Query: 396 AEDFLTLL 403
L +
Sbjct: 1144 CNVILKAI 1151
>gi|18653391|gb|AAL77415.1| putative cytosine-5 DNA methyltransferase [Oryza sativa Japonica
Group]
Length = 1522
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/198 (38%), Positives = 110/198 (55%), Gaps = 7/198 (3%)
Query: 513 KSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVL 572
K K LP+PG+V+ I GGPPCQG SG NRF +P + + + ++ F+ ++ +P+F L
Sbjct: 1173 KIKNLPVPGEVEFINGGPPCQGFSGMNRFNQ--SPWSKVQCEMILAFLSFAEYFRPRFFL 1230
Query: 573 MENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKL 632
+ENV + V F KG R LA L++M YQVR G++ AGAYG+ Q R R F+W A P E L
Sbjct: 1231 LENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAYGVAQSRKRAFIWAAAPGETL 1290
Query: 633 PPYALPTHDVV---LRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESR 689
P + P H L+ +P + A R + ++D I DLP+V+N +
Sbjct: 1291 PEWPEPMHVFASPELKITLPD--GKFYAAVKSTAAGAPFRSITVRDTIGDLPAVENGAGK 1348
Query: 690 DEIPYDREPETEFQCFIR 707
I Y P + FQ IR
Sbjct: 1349 PTIQYGSGPVSWFQKKIR 1366
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 85/188 (45%), Gaps = 22/188 (11%)
Query: 228 YYRARDTVIESNAHLIDQRRVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKL-AIPH 286
+YR D + + A+ D R V++SE P+ + K V L DL L A+
Sbjct: 969 FYRP-DDISSTKAYSSDIREVYYSEDIISVPVVMIEGK---CEVRLKDDLPNSDLPAVVE 1024
Query: 287 CDYYCDMMYLLPYSTFFSLPPENKRVSSETSSTISSDVDANE--CEV---GEPQKMD--- 338
+ C+ +Y LPP N R+ + T +S + + C++ G + D
Sbjct: 1025 HVFCCEYLYDPANGALKQLPP-NVRLVTLTRKVPASKKNKGKQICDIELGGSDKPKDGQS 1083
Query: 339 ---VKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNES 395
+ LD+++GCG +S GL +GL+L T+WA++ E A + NHPE V E+
Sbjct: 1084 ENCLATLDIFAGCGGLSEGL----QRSGLSL-TKWAIEYEEPAGDAFGENHPEAAVFVEN 1138
Query: 396 AEDFLTLL 403
L +
Sbjct: 1139 CNVILKAI 1146
>gi|296084835|emb|CBI27717.3| unnamed protein product [Vitis vinifera]
Length = 1417
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 105/192 (54%), Gaps = 3/192 (1%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LPLPG VD I GGPPCQG SG NRF + + + + ++ F+ D+ +P+F L+ENV
Sbjct: 1074 LPLPGQVDFINGGPPCQGFSGMNRFNQ--STWSKVQCEMILAFLSFADYFRPRFFLLENV 1131
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F KG R +A L++M YQVR G++ AGAYG+ Q R RVF+W A P E LP +
Sbjct: 1132 RNFVSFNKGQTFRLTVASLLEMGYQVRFGILEAGAYGVSQSRKRVFIWAASPEETLPEWP 1191
Query: 637 LPTHDVVLRGV-IPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYD 695
P H + + I A R + ++D I DLP+V N S+ + Y
Sbjct: 1192 EPMHVFAVPELKITLSKNMQYAAVRSTATGAPFRAITVRDTIGDLPAVTNGASKTGLEYQ 1251
Query: 696 REPETEFQCFIR 707
P + FQ IR
Sbjct: 1252 NGPVSWFQKKIR 1263
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 83/185 (44%), Gaps = 37/185 (20%)
Query: 228 YYRARDTVIESNAHLIDQRRVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLAIPHC 287
++R D E A+ D R VF+SE + P+E + K + +K +P C
Sbjct: 863 FFRPEDISAE-KAYTSDIREVFYSEETHFVPVEMIEGKCEVI----------QKHDLPSC 911
Query: 288 D--------YYCDMMYLLPYSTFFSLPPENKRVSSETSST--ISSDVDANECEVGEP--- 334
D ++C+ ++ + LP K S + ++ + +VGE
Sbjct: 912 DVLATFEHIFFCEHLFEPSKGSLKQLPVHIKMRYSARKAVDDAATRKRKGKGKVGEDDLK 971
Query: 335 --------QKMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH 386
Q+ + LD+++GCG +S GL +G++ VT+WA++ E A + KLNH
Sbjct: 972 VERQKTAFQENCLATLDIFAGCGGLSEGL----QQSGVS-VTKWAIEYEEPAGDAFKLNH 1026
Query: 387 PETEV 391
PE+ +
Sbjct: 1027 PESSM 1031
>gi|359486204|ref|XP_002268238.2| PREDICTED: DNA (cytosine-5)-methyltransferase 1B-like [Vitis
vinifera]
Length = 1238
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 76/187 (40%), Positives = 102/187 (54%), Gaps = 6/187 (3%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP PG VD I GGPPCQG SG NRF + + + ++ F+ D+ +P+F L+ENV
Sbjct: 893 LPRPGQVDFINGGPPCQGFSGMNRFNQ--GKWSKMQCEMILAFLSFADYFRPRFFLLENV 950
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F KG R LA L++M YQVR G++ AGAYG+PQ R R F+W A P E LP +
Sbjct: 951 RNFVTFNKGQTFRLTLASLLEMGYQVRFGVLEAGAYGVPQSRRRAFIWAASPEETLPEWP 1010
Query: 637 LPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDR 696
P H V G P N A R + ++DAI DLP++ N + Y R
Sbjct: 1011 EPMH--VFPG--PELKINNYAAVRSTATGGPFRAITVRDAIGDLPNIGNGACETTMEYPR 1066
Query: 697 EPETEFQ 703
E + +Q
Sbjct: 1067 EASSWYQ 1073
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 78/167 (46%), Gaps = 18/167 (10%)
Query: 228 YYRARDTVIESNAHLIDQRRVFFSEIQNDNPLECLVKKLNIAR---VP-LNIDLEAKKLA 283
++R D E AHL D R V++S P+ + K + + +P N E + +
Sbjct: 693 FFRPEDISAE-KAHLSDIREVYYSTQIVVVPVMAIEGKCEVRKKHELPAFNAPAEFQHI- 750
Query: 284 IPHCDYYCDMMYLLPYSTFFSLPPENKRVSSETSST--ISSDVDANECEVGEPQKMDVKL 341
++C Y LP K SSE T + +EC+ GE K +
Sbjct: 751 -----FFCQSQYDPDTRAIKKLPARLKLSSSENMDTDEAACRKRTSECKGGECDKSRLAT 805
Query: 342 LDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPE 388
LD+++GCG +S GL AG++L T+WA++ E A ++ LNHP+
Sbjct: 806 LDVFAGCGGLSEGL----QQAGVSL-TKWAIEYEEPAGEAFHLNHPD 847
>gi|112983430|ref|NP_001036980.1| DNA cytosine-5 methyltransferase [Bombyx mori]
gi|54888739|dbj|BAD67189.1| DNA cytosine-5 methyltransferase [Bombyx mori]
Length = 1409
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 116/212 (54%), Gaps = 12/212 (5%)
Query: 510 HGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPK 569
H LP+ G+V+++CGGPPCQG SG NRF +++ ++ KN + ++ D+ +PK
Sbjct: 1011 HSANGLRLPMQGEVELLCGGPPCQGFSGMNRFNSRE--YSNFKNSLVASYLSFCDYYRPK 1068
Query: 570 FVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPT 629
+ ++ENV + V F KG++ + L L+ M YQ G++ AG YG+PQ R R+ + A P
Sbjct: 1069 YFILENVRNFVAFKKGMVLKLTLRALLDMGYQCTFGILQAGNYGVPQTRRRLIILAAAPG 1128
Query: 630 EKLPPYALPTHDVVLRGVIPT------EFERNTVAYDEGQQAELARKLLLQDAISDLPSV 683
LP Y PTH R T F N + +DE + R +QDA+SDLP +
Sbjct: 1129 YNLPFYPEPTHVFSRRACTLTTTIDGKRFSTN-IHWDE---SAPKRTCTIQDAMSDLPQI 1184
Query: 684 DNYESRDEIPYDREPETEFQCFIRLRKDGKKL 715
N ++ EI Y PE+ FQ +R + KL
Sbjct: 1185 CNGANKIEIEYGSMPESHFQRLVRSNDENSKL 1216
>gi|242022906|ref|XP_002431878.1| DNA cytosine-5,-methyltransferase, putative [Pediculus humanus
corporis]
gi|212517219|gb|EEB19140.1| DNA cytosine-5,-methyltransferase, putative [Pediculus humanus
corporis]
Length = 1330
Score = 146 bits (369), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 79/215 (36%), Positives = 121/215 (56%), Gaps = 9/215 (4%)
Query: 499 NCGEKIKEFVTHGFKS---KILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQ 555
+C +KE ++ K+ + LP G+VD+ICGGPPCQG SG NRF ++ + KN
Sbjct: 923 DCNTLLKEVMSGKLKNDKGQCLPQKGEVDLICGGPPCQGFSGMNRFNSRQ--YSQFKNSL 980
Query: 556 LIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLP 615
++ F+ D+ +PK+ ++ENV + V F + ++ + L LI M YQ G++ AG YG+P
Sbjct: 981 VVSFLSYCDYFRPKYFILENVRNFVAFKRSMVLKQTLYCLISMGYQCTFGVLQAGNYGIP 1040
Query: 616 QFRMRVFLWGAQPTEKLPPYALPTHDVVLRGV---IPTEFERNTVAYDEGQQAELARKLL 672
Q R R+F+ A P KLP + PTH LR + + +R T A L R +
Sbjct: 1041 QTRRRLFILAAAPNLKLPLFPEPTHVFSLRASNLQVTVDDKRFTTNCKWSTSAPL-RTIT 1099
Query: 673 LQDAISDLPSVDNYESRDEIPYDREPETEFQCFIR 707
++DA+SDLP + N R + Y+ + +T FQ IR
Sbjct: 1100 VRDALSDLPEIPNGADRVVMNYNEDCKTHFQRLIR 1134
>gi|23306230|emb|CAD43077.1| DNA methyltransferase 1a [Paracentrotus lividus]
Length = 1461
Score = 146 bits (369), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 78/215 (36%), Positives = 125/215 (58%), Gaps = 9/215 (4%)
Query: 499 NCGEKIKEFVTHGFKS----KILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNK 554
+C E ++ V G K+ + LP GDV+++CGGPPCQG SG NRF +++ + KN
Sbjct: 1031 DCNELLR-LVMQGEKTSRTGQKLPQKGDVELLCGGPPCQGFSGMNRFNSRE--YSKFKNS 1087
Query: 555 QLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGL 614
+ ++ D+ +P+F L+ENV + V + K ++ + AL LI+M YQ G++ AG YG+
Sbjct: 1088 LISSYLSYCDYYRPRFFLLENVRNFVSYKKNMVLKLALRCLIRMGYQCTFGILQAGQYGV 1147
Query: 615 PQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEF--ERNTVAYDEGQQAELARKLL 672
PQ R R + A P EKLP Y P H R + E+ + ++ + R +
Sbjct: 1148 PQTRRRAIILAAAPGEKLPFYPEPLHVFSTRACSLSVMIGEKKIESNNQWCLSAPYRTIT 1207
Query: 673 LQDAISDLPSVDNYESRDEIPYDREPETEFQCFIR 707
++D++SDLP+++N + EI YD EP+++FQ IR
Sbjct: 1208 VRDSMSDLPTINNGAQKLEISYDGEPQSDFQKKIR 1242
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 339 VKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAED 398
+K LD+++GCG +S G + AG+ + WA++ E A Q+ +LN+P + V ++ +
Sbjct: 980 LKCLDVFAGCGGLSEGF----HQAGI-CESSWAIEKEEPAAQAYRLNNPGSTVFSDDCNE 1034
Query: 399 FLTLLREWEKLCISFSLIARKDPQQ 423
L L+ + EK S +K PQ+
Sbjct: 1035 LLRLVMQGEKT----SRTGQKLPQK 1055
>gi|23306229|emb|CAD42182.3| DNA methyltransferase [Paracentrotus lividus]
Length = 1613
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 78/215 (36%), Positives = 125/215 (58%), Gaps = 9/215 (4%)
Query: 499 NCGEKIKEFVTHGFKS----KILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNK 554
+C E ++ V G K+ + LP GDV+++CGGPPCQG SG NRF +++ + KN
Sbjct: 1183 DCNELLR-LVMQGEKTSRTGQKLPQKGDVELLCGGPPCQGFSGMNRFNSRE--YSKFKNS 1239
Query: 555 QLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGL 614
+ ++ D+ +P+F L+ENV + V + K ++ + AL LI+M YQ G++ AG YG+
Sbjct: 1240 LISSYLSYCDYYRPRFFLLENVRNFVSYKKNMVLKLALRCLIRMGYQCTFGILQAGQYGV 1299
Query: 615 PQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEF--ERNTVAYDEGQQAELARKLL 672
PQ R R + A P EKLP Y P H R + E+ + ++ + R +
Sbjct: 1300 PQTRRRAIILAAAPGEKLPFYPEPLHVFSTRACSLSVMIGEKKIESNNQWCLSAPYRTIT 1359
Query: 673 LQDAISDLPSVDNYESRDEIPYDREPETEFQCFIR 707
++D++SDLP+++N + EI YD EP+++FQ IR
Sbjct: 1360 VRDSMSDLPTINNGAQKLEISYDGEPQSDFQKKIR 1394
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 339 VKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAED 398
+K LD+++GCG +S G + AG+ + WA++ E A Q+ +LN+P + V ++ +
Sbjct: 1132 LKCLDVFAGCGGLSEGF----HQAGI-CESSWAIEKEEPAAQAYRLNNPGSTVFSDDCNE 1186
Query: 399 FLTLLREWEKLCISFSLIARKDPQQ 423
L L+ + EK S +K PQ+
Sbjct: 1187 LLRLVMQGEKT----SRTGQKLPQK 1207
>gi|23306233|emb|CAD43080.2| DNA methyltransferase 1d [Paracentrotus lividus]
Length = 1429
Score = 146 bits (368), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 78/215 (36%), Positives = 125/215 (58%), Gaps = 9/215 (4%)
Query: 499 NCGEKIKEFVTHGFKS----KILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNK 554
+C E ++ V G K+ + LP GDV+++CGGPPCQG SG NRF +++ + KN
Sbjct: 1183 DCNELLR-LVMQGEKTSRTGQKLPQKGDVELLCGGPPCQGFSGMNRFNSRE--YSKFKNS 1239
Query: 555 QLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGL 614
+ ++ D+ +P+F L+ENV + V + K ++ + AL LI+M YQ G++ AG YG+
Sbjct: 1240 LISSYLSYCDYYRPRFFLLENVRNFVSYKKNMVLKLALRCLIRMGYQCTFGILQAGQYGV 1299
Query: 615 PQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEF--ERNTVAYDEGQQAELARKLL 672
PQ R R + A P EKLP Y P H R + E+ + ++ + R +
Sbjct: 1300 PQTRRRAIILAAAPGEKLPFYPEPLHVFSTRACSLSVMIGEKKIESNNQWCLSAPYRTIT 1359
Query: 673 LQDAISDLPSVDNYESRDEIPYDREPETEFQCFIR 707
++D++SDLP+++N + EI YD EP+++FQ IR
Sbjct: 1360 VRDSMSDLPTINNGAQKLEISYDGEPQSDFQKKIR 1394
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 339 VKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAED 398
+K LD+++GCG +S G + AG+ + WA++ E A Q+ +LN+P + V ++ +
Sbjct: 1132 LKCLDVFAGCGGLSEGF----HQAGI-CESSWAIEKEEPAAQAYRLNNPGSTVFSDDCNE 1186
Query: 399 FLTLLREWEKLCISFSLIARKDPQQ 423
L L+ + EK S +K PQ+
Sbjct: 1187 LLRLVMQGEKT----SRTGQKLPQK 1207
>gi|115455937|ref|NP_001051569.1| Os03g0798300 [Oryza sativa Japonica Group]
gi|113550040|dbj|BAF13483.1| Os03g0798300, partial [Oryza sativa Japonica Group]
Length = 413
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 77/198 (38%), Positives = 110/198 (55%), Gaps = 7/198 (3%)
Query: 513 KSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVL 572
K K LP+PG+V+ I GGPPCQG SG NRF +P + + + ++ F+ ++ +P+F L
Sbjct: 64 KIKNLPVPGEVEFINGGPPCQGFSGMNRF--NQSPWSKVQCEMILAFLSFAEYFRPRFFL 121
Query: 573 MENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKL 632
+ENV + V F KG R LA L++M YQVR G++ AGAYG+ Q R R F+W A P E L
Sbjct: 122 LENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAYGVAQSRKRAFIWAAAPGETL 181
Query: 633 PPYALPTHDVV---LRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESR 689
P + P H L+ +P + A R + ++D I DLP+V+N +
Sbjct: 182 PEWPEPMHVFASPELKITLPD--GKFYAAVKSTAAGAPFRSITVRDTIGDLPAVENGAGK 239
Query: 690 DEIPYDREPETEFQCFIR 707
I Y P + FQ IR
Sbjct: 240 PTIQYGSGPVSWFQKKIR 257
>gi|108711567|gb|ABF99362.1| expressed protein [Oryza sativa Japonica Group]
gi|215766031|dbj|BAG98259.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 376
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 77/198 (38%), Positives = 110/198 (55%), Gaps = 7/198 (3%)
Query: 513 KSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVL 572
K K LP+PG+V+ I GGPPCQG SG NRF +P + + + ++ F+ ++ +P+F L
Sbjct: 27 KIKNLPVPGEVEFINGGPPCQGFSGMNRF--NQSPWSKVQCEMILAFLSFAEYFRPRFFL 84
Query: 573 MENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKL 632
+ENV + V F KG R LA L++M YQVR G++ AGAYG+ Q R R F+W A P E L
Sbjct: 85 LENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAYGVAQSRKRAFIWAAAPGETL 144
Query: 633 PPYALPTHDVV---LRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESR 689
P + P H L+ +P + A R + ++D I DLP+V+N +
Sbjct: 145 PEWPEPMHVFASPELKITLPD--GKFYAAVKSTAAGAPFRSITVRDTIGDLPAVENGAGK 202
Query: 690 DEIPYDREPETEFQCFIR 707
I Y P + FQ IR
Sbjct: 203 PTIQYGSGPVSWFQKKIR 220
>gi|297739461|emb|CBI29643.3| unnamed protein product [Vitis vinifera]
Length = 460
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 76/187 (40%), Positives = 102/187 (54%), Gaps = 6/187 (3%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP PG VD I GGPPCQG SG NRF + + + ++ F+ D+ +P+F L+ENV
Sbjct: 115 LPRPGQVDFINGGPPCQGFSGMNRF--NQGKWSKMQCEMILAFLSFADYFRPRFFLLENV 172
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F KG R LA L++M YQVR G++ AGAYG+PQ R R F+W A P E LP +
Sbjct: 173 RNFVTFNKGQTFRLTLASLLEMGYQVRFGVLEAGAYGVPQSRRRAFIWAASPEETLPEWP 232
Query: 637 LPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDR 696
P H V G P N A R + ++DAI DLP++ N + Y R
Sbjct: 233 EPMH--VFPG--PELKINNYAAVRSTATGGPFRAITVRDAIGDLPNIGNGACETTMEYPR 288
Query: 697 EPETEFQ 703
E + +Q
Sbjct: 289 EASSWYQ 295
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 40/63 (63%), Gaps = 5/63 (7%)
Query: 327 NECEVGEPQKMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH 386
+EC+ GE K + LD+++GCG +S GL AG++L T+WA++ E A ++ LNH
Sbjct: 13 SECKGGECDKSRLATLDVFAGCGGLSEGL----QQAGVSL-TKWAIEYEEPAGEAFHLNH 67
Query: 387 PET 389
P+
Sbjct: 68 PDA 70
>gi|168010951|ref|XP_001758167.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690623|gb|EDQ76989.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1579
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 80/198 (40%), Positives = 112/198 (56%), Gaps = 7/198 (3%)
Query: 513 KSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVL 572
K K+LP G+VD I GGPPCQG SG NRF + + + ++ F+ ++ +P++ L
Sbjct: 1214 KKKLLPAQGEVDFINGGPPCQGFSGMNRFNT--GAWSKVQCEMILGFLSYAEYFRPRYFL 1271
Query: 573 MENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKL 632
+ENV + V F KG R LA L++M YQVR G++ AG YG+ Q R R F+W A P E L
Sbjct: 1272 LENVRNFVSFNKGQTFRLTLATLLEMGYQVRFGVLQAGNYGVSQSRKRAFIWAAAPNEIL 1331
Query: 633 PPYALPTH---DVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESR 689
P + P H L+ +P V D G+ A L R + ++D I DLP V+N S+
Sbjct: 1332 PEWPEPMHVFGSSQLKIALPGGASYAAVR-DAGKGAPL-RAMTVKDTIYDLPPVENGASK 1389
Query: 690 DEIPYDREPETEFQCFIR 707
+EI Y P + FQ IR
Sbjct: 1390 EEIKYSDPPVSWFQKQIR 1407
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Query: 342 LDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLT 401
LD+++GCG +S GL AG+ T+WA++ A ++ LNHPET V E+ L
Sbjct: 1131 LDIFAGCGGLSEGL----RQAGV-ATTKWAIEYEHPASEAFNLNHPETNVFCENCNVILR 1185
Query: 402 LLRE 405
+ E
Sbjct: 1186 CIME 1189
>gi|12230342|sp|Q27746.1|DNMT1_PARLI RecName: Full=DNA (cytosine-5)-methyltransferase PliMCI; AltName:
Full=DNA methyltransferase PliMCI; Short=DNA MTase
PliMCI; Short=M.PliMCI; AltName: Full=Dnmt1; AltName:
Full=MCMT
gi|1004286|emb|CAA90563.1| DNA (cytosine-5-)-methyltransferase [Paracentrotus lividus]
Length = 1612
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 78/215 (36%), Positives = 124/215 (57%), Gaps = 9/215 (4%)
Query: 499 NCGEKIKEFVTHGFKS----KILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNK 554
+C E ++ V G K+ + LP GDV+++CGGPPCQG SG NRF +++ + KN
Sbjct: 1182 DCNELLR-LVMQGEKTSRTGQKLPQKGDVELLCGGPPCQGFSGMNRFNSRE--YSKFKNS 1238
Query: 555 QLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGL 614
+ ++ D+ +P+F L+ENV + V + K ++ + AL LI+M YQ G++ AG YG+
Sbjct: 1239 LISSYLSYCDYYRPRFFLLENVRNFVSYKKNMVLKLALRCLIRMGYQCTFGILQAGQYGV 1298
Query: 615 PQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEF--ERNTVAYDEGQQAELARKLL 672
PQ R R + A P EKLP Y P H R + E+ + ++ + R +
Sbjct: 1299 PQTRRRAIILAAAPGEKLPFYPEPLHVFSSRACSLSVMIGEKKIESNNQWCLSAPYRTIT 1358
Query: 673 LQDAISDLPSVDNYESRDEIPYDREPETEFQCFIR 707
++D +SDLP+++N + EI YD EP+++FQ IR
Sbjct: 1359 VRDTMSDLPTINNGAQKLEISYDGEPQSDFQKKIR 1393
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 339 VKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAED 398
+K LD+++GCG +S G + AG+ + WA++ E A Q+ +LN+P + V ++ +
Sbjct: 1131 LKCLDVFAGCGGLSEGF----HQAGI-CESSWAIEKEEPAAQAYRLNNPGSTVFSDDCNE 1185
Query: 399 FLTLLREWEKLCISFSLIARKDPQQ 423
L L+ + EK S +K PQ+
Sbjct: 1186 LLRLVMQGEKT----SRTGQKLPQK 1206
>gi|255553977|ref|XP_002518029.1| DNA (cytosine-5)-methyltransferase, putative [Ricinus communis]
gi|223543011|gb|EEF44547.1| DNA (cytosine-5)-methyltransferase, putative [Ricinus communis]
Length = 1542
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 103/192 (53%), Gaps = 3/192 (1%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LPLPG VD I GGPPCQG SG NRF + + + + ++ F+ D+ +PK+ L+ENV
Sbjct: 1196 LPLPGQVDFINGGPPCQGFSGMNRF--SQSTWSKVQCEMILAFLSFADYFRPKYFLLENV 1253
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F KG R ALA L++M YQVR G++ AGAYG+ R R F+W A P E LP +
Sbjct: 1254 RNFVSFNKGQTFRLALASLLEMGYQVRFGILEAGAYGVSHSRKRAFIWAASPEEVLPEWP 1313
Query: 637 LPTHDVVLRGV-IPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYD 695
P H + I + A R + ++D I DLP V N S + Y
Sbjct: 1314 EPMHVFSAPELKISLSGNSHYAAVRSTANGAPFRAITVRDTIGDLPVVGNGASATNMEYK 1373
Query: 696 REPETEFQCFIR 707
+P + FQ IR
Sbjct: 1374 NDPVSWFQKRIR 1385
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 78/171 (45%), Gaps = 34/171 (19%)
Query: 240 AHLIDQRRVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLAIPHCD--------YYC 291
A+ D R V+++E + +E + K + KK IP C ++C
Sbjct: 998 AYCSDIREVYYTEETHLLSVETIEGKCEVR----------KKNDIPPCGSAAIFDHIFFC 1047
Query: 292 DMMYLLPYSTFFSLPPENK-RVSSETS-STISSDVDANECEVGE---------PQKMDVK 340
+ +Y + LP K R S+ T S +S +C+ GE Q +
Sbjct: 1048 EHLYDPSKGSLKQLPAHIKLRYSTGTQESDAASRKRKGKCKEGEDEVENKREATQGRRLA 1107
Query: 341 LLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEV 391
LD++SGCG +S GL AG++ T+WA++ E A ++ KLNHPE+ V
Sbjct: 1108 TLDIFSGCGGLSEGL----QQAGVS-STKWAIEYEEPAGEAFKLNHPESLV 1153
>gi|147771321|emb|CAN71866.1| hypothetical protein VITISV_027340 [Vitis vinifera]
Length = 374
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 105/192 (54%), Gaps = 3/192 (1%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LPLPG VD I GGPPCQG SG NRF + + + + ++ F+ D+ +P+F L+ENV
Sbjct: 31 LPLPGQVDFINGGPPCQGFSGMNRF--NQSTWSKVQCEMILAFLSFADYFRPRFFLLENV 88
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F KG R +A L++M YQVR G++ AGAYG+ Q R RVF+W A P E LP +
Sbjct: 89 RNFVSFNKGQTFRLTVASLLEMGYQVRFGILEAGAYGVSQSRKRVFIWAASPEETLPEWP 148
Query: 637 LPTHDVVLRGV-IPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYD 695
P H + + I A R + ++D I DLP+V N S+ + Y
Sbjct: 149 EPMHVFAVPELKITLSKNMQYAAVRSTATGAPFRAITVRDTIGDLPAVTNGASKTGLEYQ 208
Query: 696 REPETEFQCFIR 707
P + FQ IR
Sbjct: 209 NGPVSWFQKKIR 220
>gi|147853569|emb|CAN82351.1| hypothetical protein VITISV_019436 [Vitis vinifera]
Length = 377
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/187 (40%), Positives = 102/187 (54%), Gaps = 6/187 (3%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP PG VD I GGPPCQG SG NRF + + + ++ F+ D+ +P+F L+ENV
Sbjct: 32 LPRPGQVDFINGGPPCQGFSGMNRF--NQGKWSKMQCEMILAFLSFADYFRPRFFLLENV 89
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F KG R LA L++M YQVR G++ AGAYG+PQ R R F+W A P E LP +
Sbjct: 90 RNFVTFNKGQTFRLTLASLLEMGYQVRFGVLEAGAYGVPQSRRRAFIWAASPEETLPEWP 149
Query: 637 LPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDR 696
P H V G P N A R + ++DAI DLP++ N + Y R
Sbjct: 150 EPMH--VFPG--PELKINNYAAVRSTATGGPFRAITVRDAIGDLPNIGNGACETTMEYPR 205
Query: 697 EPETEFQ 703
E + +Q
Sbjct: 206 EASSWYQ 212
>gi|242043138|ref|XP_002459440.1| hypothetical protein SORBIDRAFT_02g004680 [Sorghum bicolor]
gi|241922817|gb|EER95961.1| hypothetical protein SORBIDRAFT_02g004680 [Sorghum bicolor]
Length = 1397
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/194 (39%), Positives = 112/194 (57%), Gaps = 7/194 (3%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP+PG+V+ I GGPPCQG SG NRF +P + + + ++ F+ ++ +P+F L+ENV
Sbjct: 1042 LPVPGEVEFINGGPPCQGFSGMNRFNQ--SPWSKVQCEMILAFLSFAEYFRPRFFLLENV 1099
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F KG R A+A L++M YQVR G++ AGA+G+ Q R R F+W A P E LP +
Sbjct: 1100 RNFVSFNKGQTFRLAVASLLEMGYQVRFGILEAGAFGVAQSRKRAFIWAAAPGEMLPDWP 1159
Query: 637 LPTHDVV---LRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIP 693
P H L+ +P + + A A R + ++D I DLP V+N S+ +
Sbjct: 1160 EPMHVFASPELKITLP-DGQYYAAARSTAGGAPF-RAITVRDTIGDLPKVENGASKLTLE 1217
Query: 694 YDREPETEFQCFIR 707
Y EP + FQ IR
Sbjct: 1218 YGGEPVSWFQKKIR 1231
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 98/204 (48%), Gaps = 29/204 (14%)
Query: 207 ICKIVEMFEAVD------GTPYFTAQWYYRARDTVIESNAHLIDQRRVFFSEIQNDNPLE 260
+C+I+ + E + +A+ +YR D + + A+ D R V++SE D P++
Sbjct: 806 VCQILAIPEGAGSKKLNPASANISARRFYRP-DDISTAKAYASDIREVYYSEDVIDVPVD 864
Query: 261 CLVKKLNIARVPLNIDLEAKKLAI--PHCDYYCDMMYLLPYSTFFSLPPENKRVSSETSS 318
+ K + + DL + L + H ++C+++Y LPP + +S +
Sbjct: 865 MIEGKCEVRK---KNDLASSDLPVMFEHV-FFCELIYDRASGALKQLPPNVRFMSMVQKA 920
Query: 319 TISSDVDANE--CEVGE---------PQKMDVKLLDLYSGCGAMSTGLCLGANLAGLNLV 367
TI+S + + CE + P++ + LD+++GCG +S GL AG++
Sbjct: 921 TIASKKNKGKQICETDQIDSGKWLDVPKENRLATLDIFAGCGGLSEGL----QQAGVSF- 975
Query: 368 TRWAVDINEYACQSLKLNHPETEV 391
T+WA++ E A ++ NHPE V
Sbjct: 976 TKWAIEYEEPAGEAFSKNHPEAVV 999
>gi|169977306|emb|CAQ18900.1| DNA (cytosine-5) methyltransferase [Nicotiana sylvestris]
Length = 1558
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/195 (38%), Positives = 111/195 (56%), Gaps = 9/195 (4%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LPLPG VD I GGPPCQG SG NRF + + + + ++ F+ D+ +PKF L+ENV
Sbjct: 1210 LPLPGQVDFINGGPPCQGFSGMNRFNQ--STWSKVQCEMILAFLSFADYYRPKFFLLENV 1267
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F + R +A L++M YQVR G++ AGA+G+PQ R R F+W A P E LP +
Sbjct: 1268 RNFVSFNQKQTFRLTVASLLEMGYQVRFGILEAGAFGVPQSRKRAFIWAASPEEILPEWP 1327
Query: 637 LPTHDVVLRGVIPTEFERNTVAYDEGQQAELA----RKLLLQDAISDLPSVDNYESRDEI 692
P H + GV + + ++ ++ + R L ++D I DLP+V N S+ I
Sbjct: 1328 EPMH---VFGVPELKIALSETSHYAAVRSTASGAPFRSLTVRDTIGDLPAVGNGASKTCI 1384
Query: 693 PYDREPETEFQCFIR 707
Y +P + FQ IR
Sbjct: 1385 EYQVDPVSWFQRKIR 1399
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 90/190 (47%), Gaps = 20/190 (10%)
Query: 228 YYRARDTVIESNAHLIDQRRVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLAIPHC 287
++R D + A+ D R +++SE + P+E + K + R +I E H
Sbjct: 1000 FFRPED-ISSDKAYSSDIREIYYSEEIHTVPVETIEGKCEV-RKKYDIPSEDVPAIFDHV 1057
Query: 288 DYYCDMMYLLPYSTFFSLPPENK----RVSSETSSTISSDVDANECE----VGE----PQ 335
++C+ Y + LP + K RV + +++ E E VG+ Q
Sbjct: 1058 -FFCEYFYDPLNGSLKQLPAQVKLRFSRVKLDDAASRKRKGKGKEGEDELRVGQLNEASQ 1116
Query: 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNES 395
+ + LD+++GCG +S GL +G++ T+WA++ E A + KLNHPE +V ++
Sbjct: 1117 QNRLATLDIFAGCGGLSEGL----QRSGVS-DTKWAIEYEEPAGDAFKLNHPEAKVFIQN 1171
Query: 396 AEDFLTLLRE 405
FL ++ +
Sbjct: 1172 CNVFLRVVMQ 1181
>gi|116062014|dbj|BAF34635.1| DNA methyltransferase 1a [Brassica rapa]
Length = 1528
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/199 (39%), Positives = 109/199 (54%), Gaps = 9/199 (4%)
Query: 513 KSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVL 572
+ + LPLPG VD I GGPPCQG SG NRF + + + + ++ F+ D+ +P++ L
Sbjct: 1174 QKRTLPLPGQVDFINGGPPCQGFSGMNRFNQ--SSWSKVQCEMILAFLSFADYFRPRYFL 1231
Query: 573 MENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKL 632
+ENV V F KG + LA L++M YQVR G++ AGAYG+ Q R R F+W A P E L
Sbjct: 1232 LENVRTFVSFNKGQTFQLTLASLLEMGYQVRFGILEAGAYGVSQSRKRAFIWAAAPDEVL 1291
Query: 633 PPYALPTHDVVLRGV----IPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYES 688
P + P H + GV I + A Q R + ++D I DLPSV N ES
Sbjct: 1292 PEWPEPMH---VFGVPELKISLSKGVHYAAVRSTQYGAPFRPITVRDTIGDLPSVVNGES 1348
Query: 689 RDEIPYDREPETEFQCFIR 707
+ Y +P + FQ IR
Sbjct: 1349 NTKREYKAQPISWFQKEIR 1367
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 93/200 (46%), Gaps = 24/200 (12%)
Query: 207 ICKIVEMF---EAVDGTPYFTAQWYYRARDTVIESNAHLIDQRRVFFSEIQNDNPLECLV 263
+C+I+E+ E+ + + YR D V + A+ D + +++SE + E L
Sbjct: 945 VCQILEIIVLKESRKASFEVKVRRLYRPED-VSDEKAYASDIQELYYSEDTDVLQPEALE 1003
Query: 264 KKLNIARVPLNIDLEAKK-LAIPHCDYYCDMMYLLPYSTFFSLP----PENKRVSSET-- 316
+ + + ID+ +++ I ++C+ +Y + LP P+ V E
Sbjct: 1004 GRCEVRK---KIDMPSRREYPISDNIFFCEQIYDPSKGSLKQLPVNIKPKYTTVKDEALL 1060
Query: 317 ----SSTISSDVDANECEVGEPQK-MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWA 371
+ ++ D+ + E K + LD+++GCG +S GL AG++ T+WA
Sbjct: 1061 RKRKGKGLVTETDSVTDKPEEVSKETRLATLDIFAGCGGLSQGL----EQAGVS-ATKWA 1115
Query: 372 VDINEYACQSLKLNHPETEV 391
++ E A ++ + NHPET V
Sbjct: 1116 IEYEEPAGKAFRKNHPETTV 1135
>gi|3132825|gb|AAC16389.1| putative cytosine-5 DNA methyltransferase [Zea mays]
Length = 1525
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/194 (39%), Positives = 111/194 (57%), Gaps = 7/194 (3%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP+PG+V+ I GGPPCQG SG NRF +P + + + ++ F+ ++ +P+F L+ENV
Sbjct: 1171 LPVPGEVEFINGGPPCQGFSGMNRFNQ--SPWSKVQCEMILAFLSFAEYFRPRFFLLENV 1228
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F KG R A+A L++M YQVR G++ AGA+G+ Q R R F+W A P E LP +
Sbjct: 1229 RNFVSFNKGQTFRLAVASLLEMGYQVRFGILEAGAFGVAQSRKRAFIWAAAPGEMLPDWP 1288
Query: 637 LPTHDVV---LRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIP 693
P H L+ +P + + A A R + ++D I DLP V N S+ +
Sbjct: 1289 EPMHVFASPELKITLP-DGQYYAAARSTAGGAPF-RAITVRDTIGDLPKVGNGASKLTLE 1346
Query: 694 YDREPETEFQCFIR 707
Y EP + FQ IR
Sbjct: 1347 YGGEPVSWFQKKIR 1360
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 120/261 (45%), Gaps = 41/261 (15%)
Query: 162 NQKDDDEEEIIQAKCHYMWAEVDGHITYDLF----------DDAHVKA--ESGEEDY-IC 208
N + D +E I +K +++ +V ++ L+ D A KA G + Y +C
Sbjct: 878 NIEPDSDELKIFSKTSFVYRKVTYNVNEFLYIRPDFFAEDEDRATFKAGRNVGLKPYAVC 937
Query: 209 KIVEMFEAVD------GTPYFTAQWYYRARDTVIESNAHLIDQRRVFFSEIQNDNPLECL 262
+I+ + E + +A+ +YR D + + A+ D R V++SE D P++ +
Sbjct: 938 QILSIPEGAGSKKLNPASANISARRFYRP-DDISSAKAYASDIREVYYSEDVIDVPVDMI 996
Query: 263 VKKLNIARVPLNIDLEAKKLAI--PHCDYYCDMMYLLPYSTFFSLPPENKRVSS-ETSST 319
K + + DL + L + H ++C+++Y LPP + +S + +S
Sbjct: 997 EGKCEVRK---KNDLASSDLPVMFEHV-FFCELIYDRASGALKQLPPNVRFMSMVQRTSA 1052
Query: 320 ISSDVDANECEVGE---------PQKMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRW 370
+ + CE + P++ + LD+++GCG +S GL AG++ T+W
Sbjct: 1053 LKKNKGKQICEPDQIDSGKWLDVPKENRLATLDIFAGCGGLSEGL----QQAGVSF-TKW 1107
Query: 371 AVDINEYACQSLKLNHPETEV 391
A++ E A ++ NHPE V
Sbjct: 1108 AIEYEEPAGEAFNKNHPEAVV 1128
>gi|297804976|ref|XP_002870372.1| hypothetical protein ARALYDRAFT_355455 [Arabidopsis lyrata subsp.
lyrata]
gi|297316208|gb|EFH46631.1| hypothetical protein ARALYDRAFT_355455 [Arabidopsis lyrata subsp.
lyrata]
Length = 1496
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/196 (39%), Positives = 107/196 (54%), Gaps = 3/196 (1%)
Query: 516 ILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMEN 575
ILPLPG VD I GGPPCQG SG NRF D + + + ++ F+ D+ +PK+ L+EN
Sbjct: 1134 ILPLPGQVDFINGGPPCQGFSGMNRF--SDRSWSKVQCEMILAFLSFADYFRPKYFLLEN 1191
Query: 576 VVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPY 635
V V F KG + +A L++M YQVR G++ AGAYG+ Q R R F+W A P E LP +
Sbjct: 1192 VKKFVTFNKGRTFQLTVASLLEMGYQVRFGLLEAGAYGISQPRKRAFIWAAAPNEVLPEW 1251
Query: 636 ALPTHDVVLRGV-IPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPY 694
P H G I + A + R + ++D I DLP V++ ES+ Y
Sbjct: 1252 PEPMHVFNNPGFKISLSRRLHYAAVQSTKFGAPFRSITVRDTIGDLPPVESGESKINKEY 1311
Query: 695 DREPETEFQCFIRLRK 710
D P + FQ +R K
Sbjct: 1312 DIVPVSWFQKEMRGNK 1327
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 11/84 (13%)
Query: 308 ENKRVSSETSSTISSDVDANECEVGEPQKMDVKLLDLYSGCGAMSTGLCLGANLAGLNLV 367
+ K V SET S +S D EV P++M + LD+++GCG +S GL AG++
Sbjct: 1020 KGKGVLSETDSVMSVKPD----EV--PKEMRLATLDIFAGCGGLSYGL----EKAGVS-D 1068
Query: 368 TRWAVDINEYACQSLKLNHPETEV 391
T+WA++ E A Q+ K NHP+T V
Sbjct: 1069 TKWAIEYEEPAAQAFKQNHPKTTV 1092
>gi|261414304|gb|ACX83570.1| DNA methyltransferase [Hieracium pilosella]
Length = 1569
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/200 (40%), Positives = 107/200 (53%), Gaps = 15/200 (7%)
Query: 515 KILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLME 574
K LP PG VD I GGPPCQG SG NRF + + + + ++ F+ ++ +PK+ L+E
Sbjct: 1216 KNLPRPGQVDFINGGPPCQGFSGMNRFNQ--STWSKAQCEMILAFLSFAEYFRPKYSLLE 1273
Query: 575 NVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPP 634
NV + V F KG R ALA L++M YQVR G++ AGA+G+ Q R R F+W A P E LP
Sbjct: 1274 NVRNFVSFNKGQTFRLALASLLEMGYQVRFGILEAGAFGVSQSRKRAFIWAASPEEILPE 1333
Query: 635 YALPTH-------DVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYE 687
+ P H V L G R+T + R + ++D I DLP V N
Sbjct: 1334 WPEPMHVFASPELRVSLNGNSQYAAARSTAS------GAPFRAITVRDTIGDLPPVGNGA 1387
Query: 688 SRDEIPYDREPETEFQCFIR 707
S I Y EP + FQ IR
Sbjct: 1388 SNPTIEYKNEPVSWFQKRIR 1407
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 80/178 (44%), Gaps = 27/178 (15%)
Query: 228 YYRARDTVIESNAHLIDQRRVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLA-IPH 286
++R D ++ A+ D + V++SE + + + K + R DL ++ I
Sbjct: 1007 FFRPEDLSLD-KAYRSDIQEVYYSEEVHKLAVSSIEGKCEVRR---KKDLSSQNTTYITD 1062
Query: 287 CDYYCDMMY--------LLPYSTFFSLPPENK------RVSSETSSTISSDVDANECEVG 332
++C+ +Y LP + S P E R S DV+ E +
Sbjct: 1063 HVFFCERLYDPTKGSLKQLPVNIKLSPPKETPANEAAIRKRKGKSKEGEDDVEMTENKDS 1122
Query: 333 EPQKMDVKLLDLYSGCGAMSTGLC-LGANLAGLNLVTRWAVDINEYACQSLKLNHPET 389
+ + +K LD+++GCG +S GL GA+ VT+WA++ E A + +LNHPE
Sbjct: 1123 VSKNI-LKTLDIFAGCGGLSEGLTKAGAS------VTKWAIEYEEPAGDAFRLNHPEA 1173
>gi|414883785|tpg|DAA59799.1| TPA: cytosine-specific methyltransferase [Zea mays]
Length = 1536
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/194 (39%), Positives = 111/194 (57%), Gaps = 7/194 (3%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP+PG+V+ I GGPPCQG SG NRF +P + + + ++ F+ ++ +P+F L+ENV
Sbjct: 1182 LPVPGEVEFINGGPPCQGFSGMNRFNQ--SPWSKVQCEMILAFLSFAEYFRPRFFLLENV 1239
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F KG R A+A L++M YQVR G++ AGA+G+ Q R R F+W A P E LP +
Sbjct: 1240 RNFVSFNKGQTFRLAVASLLEMGYQVRFGILEAGAFGVAQSRKRAFIWAAAPGEMLPDWP 1299
Query: 637 LPTHDVV---LRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIP 693
P H L+ +P + + A A R + ++D I DLP V N S+ +
Sbjct: 1300 EPMHVFASPELKITLP-DGQYYAAARSTAGGAPF-RAITVRDTIGDLPKVGNGASKLTLE 1357
Query: 694 YDREPETEFQCFIR 707
Y EP + FQ IR
Sbjct: 1358 YGGEPVSWFQKKIR 1371
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 120/261 (45%), Gaps = 41/261 (15%)
Query: 162 NQKDDDEEEIIQAKCHYMWAEVDGHITYDLF----------DDAHVKA--ESGEEDY-IC 208
N + D +E I +K +++ +V ++ L+ D A KA G + Y +C
Sbjct: 889 NIEPDSDELKIFSKTSFVYRKVTYNVNEFLYIRPDFFAEDEDRATFKAGRNVGLKPYAVC 948
Query: 209 KIVEMFEAVD------GTPYFTAQWYYRARDTVIESNAHLIDQRRVFFSEIQNDNPLECL 262
+I+ + E + +A+ +YR D + + A+ D R V++SE D P++ +
Sbjct: 949 QILSIPEGAGSKKLNPASANISARRFYRP-DDISSAKAYASDIREVYYSEDVIDVPVDMI 1007
Query: 263 VKKLNIARVPLNIDLEAKKLAI--PHCDYYCDMMYLLPYSTFFSLPPENKRVSS-ETSST 319
K + + DL + L + H ++C+++Y LPP + +S + +S
Sbjct: 1008 EGKCEVRK---KNDLASSDLPVMFEHV-FFCELIYDRASGALKQLPPNVRFMSMVQRTSA 1063
Query: 320 ISSDVDANECEVGE---------PQKMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRW 370
+ + CE + P++ + LD+++GCG +S GL AG++ T+W
Sbjct: 1064 LKKNKGKQICEPDQIDSGKWLDVPKENRLATLDIFAGCGGLSEGL----QQAGVSF-TKW 1118
Query: 371 AVDINEYACQSLKLNHPETEV 391
A++ E A ++ NHPE V
Sbjct: 1119 AIEYEEPAGEAFNKNHPEAVV 1139
>gi|7288140|dbj|BAA92852.1| DNA (cytosine-5-)-methyltransferase [Nicotiana tabacum]
gi|56130955|gb|AAV80209.1| cytosine-5-methyltransferase [Nicotiana tabacum]
Length = 1556
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 107/192 (55%), Gaps = 3/192 (1%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LPLPG VD I GGPPCQG SG NRF + + + + ++ F+ D+ +PKF L+ENV
Sbjct: 1208 LPLPGQVDFINGGPPCQGFSGMNRFNQ--STWSKVQCEMILAFLSFADYYRPKFFLLENV 1265
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F + R +A L++M YQVR G++ AGA+G+PQ R R F+W A P E LP +
Sbjct: 1266 RNFVSFNQKQTFRLTVASLLEMGYQVRFGILEAGAFGVPQSRKRAFIWAASPEEILPEWP 1325
Query: 637 LPTHDVVLRGVIPTEFER-NTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYD 695
P H + + T E + A R L ++D I DLP+V N S+ I Y
Sbjct: 1326 EPMHVFGVPELKITLSETCHYAAVRSTASGAPFRSLTVRDTIGDLPAVGNGASKTCIEYQ 1385
Query: 696 REPETEFQCFIR 707
+P + FQ IR
Sbjct: 1386 VDPISWFQRKIR 1397
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 84/176 (47%), Gaps = 20/176 (11%)
Query: 228 YYRARDTVIESNAHLIDQRRVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLAIPHC 287
++R D + A+ D R +++SE + P+E + K + R +I E H
Sbjct: 998 FFRPED-ISSDKAYSSDIREIYYSEEIHTVPVETIEGKCEV-RKKYDIPSEDVPATFDHV 1055
Query: 288 DYYCDMMYLLPYSTFFSLPPENK----RVSSETSSTISSDVDANECE----VGE----PQ 335
++C+ +Y + LP + K RV + +++ E E VG+ Q
Sbjct: 1056 -FFCEYLYDPLNGSLKQLPAQVKLRFSRVKLDDAASRKRKGKGKEGEDELRVGQLNVASQ 1114
Query: 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEV 391
+ + LD+++GCG +S GL +G++ T+WA++ E A + KLNHPE +V
Sbjct: 1115 QNRLATLDIFAGCGGLSEGL----QRSGVS-DTKWAIEYEEPAGDAFKLNHPEAKV 1165
>gi|357470695|ref|XP_003605632.1| DNA (cytosine-5)-methyltransferase [Medicago truncatula]
gi|355506687|gb|AES87829.1| DNA (cytosine-5)-methyltransferase [Medicago truncatula]
Length = 1641
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 106/192 (55%), Gaps = 3/192 (1%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LPLPG VD I GGPPCQG SG NRF + + + + ++ F+ D+ +P++ L+ENV
Sbjct: 1136 LPLPGQVDFINGGPPCQGFSGMNRFNT--STWSKVQCEMILAFLSFADYFRPRYFLLENV 1193
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F KG R LA L++M YQVR G++ AGA+G+ Q R RVF+W A P + LP +
Sbjct: 1194 RNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAFGVSQSRKRVFIWAASPEDVLPEWP 1253
Query: 637 LPTHDVVLRGVIPTEFER-NTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYD 695
P H + T E+ A R + ++D I +L +V N SR + Y
Sbjct: 1254 EPMHVFSAPELKITLSEKVQYAAVRSTTNGAPLRAITVRDTIGELQAVGNGASRTNMEYQ 1313
Query: 696 REPETEFQCFIR 707
+P + FQ IR
Sbjct: 1314 SDPVSWFQTKIR 1325
>gi|261414302|gb|ACX83569.1| DNA methyltransferase [Hieracium piloselloides]
Length = 1547
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 80/200 (40%), Positives = 107/200 (53%), Gaps = 15/200 (7%)
Query: 515 KILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLME 574
K LP PG VD I GGPPCQG SG NRF + + + + ++ F+ ++ +PK+ L+E
Sbjct: 1195 KNLPRPGQVDFINGGPPCQGFSGMNRFNQ--STWSKVQCEMILAFLSFAEYFRPKYFLLE 1252
Query: 575 NVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPP 634
NV + V F KG R ALA L++M YQVR G++ AGA+G+ Q R R F+W A P E LP
Sbjct: 1253 NVRNFVSFNKGQTFRLALASLLEMGYQVRFGILEAGAFGVSQSRKRAFIWAASPEEILPE 1312
Query: 635 YALPTH-------DVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYE 687
+ P H V L G R+T + R + ++D I DLP V N
Sbjct: 1313 WPEPMHVFASPELRVSLNGNSQYAAARSTAS------GAPFRAITVRDTIGDLPPVGNGA 1366
Query: 688 SRDEIPYDREPETEFQCFIR 707
S I Y EP + FQ IR
Sbjct: 1367 SNPTIEYKNEPVSWFQKRIR 1386
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 27/178 (15%)
Query: 228 YYRARDTVIESNAHLIDQRRVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLA-IPH 286
++R D ++ A+ D + V++SE + + + K + R DL ++ I
Sbjct: 986 FFRPEDLSLD-KAYQSDIQEVYYSEEVHKLAVSSIEGKCEVRR---KKDLSSQNTTYITD 1041
Query: 287 CDYYCDMMY--------LLPYSTFFSLPPENK------RVSSETSSTISSDVDANECEVG 332
++C+ +Y LP + S P E R S DV+ E +
Sbjct: 1042 HVFFCERLYDPTKGSLKQLPVNIKLSPPKETPANEAAIRKRKGKSKEGEDDVEMTENK-D 1100
Query: 333 EPQKMDVKLLDLYSGCGAMSTGLC-LGANLAGLNLVTRWAVDINEYACQSLKLNHPET 389
K+ +K LD+++GCG +S GL GA+ VT+WA++ E A + +LNHPE
Sbjct: 1101 SVSKIILKTLDIFAGCGGLSEGLTKAGAS------VTKWAIEYEEPAGDAFRLNHPEA 1152
>gi|350536241|ref|NP_001234748.1| DNA (cytosine-5)-methyltransferase [Solanum lycopersicum]
gi|2887280|emb|CAA05207.1| DNA (cytosine-5)-methyltransferase [Solanum lycopersicum]
Length = 1559
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/195 (38%), Positives = 108/195 (55%), Gaps = 9/195 (4%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LPLPG VD I GGPPCQG SG NRF + + + + ++ F+ D+ +PKF L+ENV
Sbjct: 1211 LPLPGQVDFINGGPPCQGFSGMNRFNQ--STWSKVQCEMILAFLSFADYYRPKFFLLENV 1268
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F + R +A L++M YQVR G++ AGAYG+PQ R R F+W P E LP +
Sbjct: 1269 RNFVSFNQKQTFRLTVASLLEMGYQVRFGILEAGAYGVPQSRKRAFIWAGSPEEVLPEWP 1328
Query: 637 LPTHDVVLRGVIPTEFERNTVAYDEGQQAELA----RKLLLQDAISDLPSVDNYESRDEI 692
P H + V + + +Y ++ + R L ++D I DLP V N S+ I
Sbjct: 1329 EPMH---VFAVPELKIALSETSYYAAVRSTASGAPFRSLTVRDTIGDLPVVGNGASKTCI 1385
Query: 693 PYDREPETEFQCFIR 707
Y +P + FQ IR
Sbjct: 1386 EYQGDPVSWFQKKIR 1400
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 79/175 (45%), Gaps = 20/175 (11%)
Query: 228 YYRARDTVIESNAHLIDQRRVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLAIPHC 287
++R D + A+ D R +++SE + P+E + K + R +I E H
Sbjct: 1003 FFRPED-ISSDKAYSSDIREIYYSEDIHTVPVEIIKGKCEV-RKKYDISSEDVPAMFDHI 1060
Query: 288 DYYCDMMYLLPYSTFFSLPPENKRVSSE------TSSTISSDVDANECEVGE-----PQK 336
++C+ +Y + LP + + S+ TS EVGE PQ
Sbjct: 1061 -FFCEYLYDPLNGSLKKLPAQINLILSKIKLDDATSRKRKGKGKEGVDEVGELNETSPQN 1119
Query: 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEV 391
+ LD+++GCG +S GL +G+ T WA++ A + +LNHP+T+V
Sbjct: 1120 R-LSTLDIFAGCGGLSEGL----QHSGVT-DTNWAIEYEAPAGDAFRLNHPKTKV 1168
>gi|72091983|ref|XP_780273.1| PREDICTED: DNA (cytosine-5)-methyltransferase PliMCI-like isoform 1
[Strongylocentrotus purpuratus]
Length = 1618
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/215 (36%), Positives = 121/215 (56%), Gaps = 9/215 (4%)
Query: 499 NCGEKIKEFVTHGFKS----KILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNK 554
+C E ++ V G K+ + LP GDV+++CGGPPCQG SG NRF +++ + KN
Sbjct: 1188 DCNELLR-LVMQGDKTSRTGQKLPQKGDVELLCGGPPCQGFSGMNRFNSRE--YSKFKNS 1244
Query: 555 QLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGL 614
+ ++ D+ +P+F L+ENV + V + K ++ + AL LI+M YQ G++ AG YG+
Sbjct: 1245 LISSYLSYCDYYRPRFFLLENVRNFVSYKKNMVLKLALRCLIRMGYQCTFGILQAGQYGV 1304
Query: 615 PQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELA--RKLL 672
PQ R R + A P EKLP Y P H R + + Q A R +
Sbjct: 1305 PQTRRRAIILAAAPGEKLPFYPEPLHVFSPRACSLSVMIGDKKIQSNNQWCLSAPYRTIS 1364
Query: 673 LQDAISDLPSVDNYESRDEIPYDREPETEFQCFIR 707
++D++SDLP++ N + EI YD EP+++FQ IR
Sbjct: 1365 VRDSMSDLPTISNGAQKLEISYDGEPQSDFQKKIR 1399
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 339 VKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAED 398
+K LD+++GCG +S G + AG+ + WA++ E A Q+ +LN+P + V ++ +
Sbjct: 1137 LKCLDVFAGCGGLSEGF----HQAGI-CESSWAIEKEEPAAQAFRLNNPGSTVFSDDCNE 1191
Query: 399 FLTLLREWEKLCISFSLIARKDPQQ 423
L L+ + +K S +K PQ+
Sbjct: 1192 LLRLVMQGDKT----SRTGQKLPQK 1212
>gi|390363610|ref|XP_003730410.1| PREDICTED: DNA (cytosine-5)-methyltransferase PliMCI-like
[Strongylocentrotus purpuratus]
Length = 1618
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/215 (36%), Positives = 121/215 (56%), Gaps = 9/215 (4%)
Query: 499 NCGEKIKEFVTHGFKS----KILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNK 554
+C E ++ V G K+ + LP GDV+++CGGPPCQG SG NRF +++ + KN
Sbjct: 1188 DCNELLR-LVMQGDKTSRTGQKLPQKGDVELLCGGPPCQGFSGMNRFNSRE--YSKFKNS 1244
Query: 555 QLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGL 614
+ ++ D+ +P+F L+ENV + V + K ++ + AL LI+M YQ G++ AG YG+
Sbjct: 1245 LISSYLSYCDYYRPRFFLLENVRNFVSYKKNMVLKLALRCLIRMGYQCTFGILQAGQYGV 1304
Query: 615 PQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELA--RKLL 672
PQ R R + A P EKLP Y P H R + + Q A R +
Sbjct: 1305 PQTRRRAIILAAAPGEKLPFYPEPLHVFSPRACSLSVMIGDKKIQSNNQWCLSAPYRTIS 1364
Query: 673 LQDAISDLPSVDNYESRDEIPYDREPETEFQCFIR 707
++D++SDLP++ N + EI YD EP+++FQ IR
Sbjct: 1365 VRDSMSDLPTISNGAQKLEISYDGEPQSDFQKKIR 1399
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 339 VKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAED 398
+K LD+++GCG +S G + AG+ + WA++ E A Q+ +LN+P + V ++ +
Sbjct: 1137 LKCLDVFAGCGGLSEGF----HQAGI-CESSWAIEKEEPAAQAFRLNNPGSTVFSDDCNE 1191
Query: 399 FLTLLREWEKLCISFSLIARKDPQQ 423
L L+ + +K S +K PQ+
Sbjct: 1192 LLRLVMQGDKT----SRTGQKLPQK 1212
>gi|117307345|dbj|BAF36443.1| DNA methyltransferase type 1 [Nicotiana tabacum]
Length = 1558
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 107/192 (55%), Gaps = 3/192 (1%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LPLPG VD I GGPPCQG SG NRF + + + + ++ F+ D+ +PKF L+ENV
Sbjct: 1210 LPLPGQVDFINGGPPCQGFSGMNRFNQ--STWSKVQCEMILAFLSFADYYRPKFFLLENV 1267
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F + R +A L++M YQVR G++ AGA+G+PQ R R F+W A P E LP +
Sbjct: 1268 RNFVSFNQKQTFRLTVASLLEMGYQVRFGILEAGAFGVPQSRKRAFIWAASPEEILPEWP 1327
Query: 637 LPTHDVVLRGVIPTEFER-NTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYD 695
P H + + T E + A R L ++D I DLP+V N S+ I Y
Sbjct: 1328 EPMHVFGVPELKITLSETCHYAAVRSTASGAPFRSLTVRDTIGDLPAVGNGASKTCIEYQ 1387
Query: 696 REPETEFQCFIR 707
+P + FQ IR
Sbjct: 1388 VDPISWFQRKIR 1399
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 96/204 (47%), Gaps = 28/204 (13%)
Query: 207 ICKIVEMF-------EAVDGTPYFTAQWYYRARDTVIESNAHLIDQRRVFFSEIQNDNPL 259
+C+++E+F VD T + ++R D + A+ D R +++SE + P+
Sbjct: 973 VCQLLEIFGPKGSKQAKVDST-NVKVRRFFRPED-ISSDKAYSSDIREIYYSEEIHTVPV 1030
Query: 260 ECLVKKLNIARVPLNIDLEAKKLAIPHCDYYCDMMYLLPYSTFFSLPPENK----RVSSE 315
E + K + R +I E H ++C+ +Y + LP + K RV +
Sbjct: 1031 ETIEGKCEV-RKKYDIPSEDVPATFDHV-FFCEYLYDPLNGSLKQLPAQVKLRFSRVKLD 1088
Query: 316 TSSTISSDVDANECE----VGE----PQKMDVKLLDLYSGCGAMSTGLCLGANLAGLNLV 367
+++ E E VG+ Q+ + LD+++GCG +S GL +G++
Sbjct: 1089 DAASRKRKGKGKEGEDELRVGQLNVASQQNRLATLDIFAGCGGLSEGL----QRSGVS-D 1143
Query: 368 TRWAVDINEYACQSLKLNHPETEV 391
T+WA++ E A + KLNHPE +V
Sbjct: 1144 TKWAIEYEEPAGDAFKLNHPEAKV 1167
>gi|414883787|tpg|DAA59801.1| TPA: cytosine-specific methyltransferase [Zea mays]
Length = 1536
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 111/194 (57%), Gaps = 7/194 (3%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP+PG+V+ I GGPPCQG SG NRF +P + + + ++ F+ ++ +P+F L+ENV
Sbjct: 1182 LPVPGEVEFINGGPPCQGFSGMNRFNQ--SPWSKVQCEMILAFLSFAEYFRPRFFLLENV 1239
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F KG R A+A L++M YQVR G++ AGA+G+ Q R R F+W A P E LP +
Sbjct: 1240 RNFVSFNKGQTFRLAVASLLEMGYQVRFGILEAGAFGVAQSRKRAFIWAAAPGEMLPDWP 1299
Query: 637 LPTHDVV---LRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIP 693
P H L+ +P + + A A R + ++D + DLP V N S+ +
Sbjct: 1300 EPMHVFASPELKITLP-DGQYYAAARSTAGGAPF-RAITVRDTVGDLPKVGNGASKLTLE 1357
Query: 694 YDREPETEFQCFIR 707
Y EP + FQ IR
Sbjct: 1358 YGGEPVSWFQKKIR 1371
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 121/261 (46%), Gaps = 41/261 (15%)
Query: 162 NQKDDDEEEIIQAKCHYMWAEVDG------HITYDLF----DDAHVKA--ESGEEDY-IC 208
N + D +E I +K +++ +V +I+ D F D A KA G + Y +C
Sbjct: 889 NIEPDSDELKIFSKTSFVYRKVTYNVNEFLYISPDFFAEDEDRATFKAGRNVGLKPYAVC 948
Query: 209 KIVEMFEAVD------GTPYFTAQWYYRARDTVIESNAHLIDQRRVFFSEIQNDNPLECL 262
+I+ + E + +A+ +YR D + + A+ D R V++SE D P++ +
Sbjct: 949 QILSIPEGAGSKKLNPASANISARRFYRP-DDISSAKAYASDIREVYYSEDVIDVPVDMI 1007
Query: 263 VKKLNIARVPLNIDLEAKKLAI--PHCDYYCDMMYLLPYSTFFSLPPENKRVSS-ETSST 319
K + + DL + L + H ++C+++Y LPP + +S + +S
Sbjct: 1008 EGKCEVRK---KNDLASSDLPVMFEHV-FFCELIYDRASGALKQLPPNVRFMSMVQRTSA 1063
Query: 320 ISSDVDANECEVGE---------PQKMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRW 370
+ + CE + P++ + LD+++GCG +S GL AG++ T+W
Sbjct: 1064 LKKNKGKQICEPDQIDSGKWLDVPKENRLATLDIFAGCGGLSEGL----QQAGVSF-TKW 1118
Query: 371 AVDINEYACQSLKLNHPETEV 391
A++ E A ++ NHPE V
Sbjct: 1119 AIEYEEPAGEAFNKNHPEAVV 1139
>gi|10257413|gb|AAG15406.1| cytosine-5 DNA methyltransferase MET1 [Zea mays]
Length = 784
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 76/194 (39%), Positives = 111/194 (57%), Gaps = 7/194 (3%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP+PG+V+ I GGPPCQG SG NRF +P + + + ++ F+ ++ +P+F L+ENV
Sbjct: 430 LPVPGEVEFINGGPPCQGFSGMNRFNQ--SPWSKVQCEMILAFLSFAEYFRPRFFLLENV 487
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F KG R A+A L++M YQVR G++ AGA+G+ Q R R F+W A P E LP +
Sbjct: 488 RNFVSFNKGQTFRLAVASLLEMGYQVRFGILEAGAFGVAQSRKRAFIWAAAPGEMLPDWP 547
Query: 637 LPTHDVV---LRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIP 693
P H L+ +P + + A A R + ++D I DLP V N S+ +
Sbjct: 548 EPMHVFASPELKITLP-DGQYYAAARSTAGGAPF-RAITVRDTIGDLPKVGNGASKLTLE 605
Query: 694 YDREPETEFQCFIR 707
Y EP + FQ IR
Sbjct: 606 YGGEPVSWFQKKIR 619
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 120/261 (45%), Gaps = 41/261 (15%)
Query: 162 NQKDDDEEEIIQAKCHYMWAEVDGHITYDLF----------DDAHVKA--ESGEEDY-IC 208
N + D +E I +K +++ +V ++ L+ D A KA G + Y +C
Sbjct: 137 NIEPDSDELKIFSKTSFVYRKVTYNVNEFLYIRPDFFAEDEDRATFKAGRNVGLKPYAVC 196
Query: 209 KIVEMFEAVD------GTPYFTAQWYYRARDTVIESNAHLIDQRRVFFSEIQNDNPLECL 262
+I+ + E + +A+ +YR D + + A+ D R V++SE D P++ +
Sbjct: 197 QILSIPEGAGSKKLNPASANISARRFYRP-DDISSAKAYASDIREVYYSEDVIDVPVDMI 255
Query: 263 VKKLNIARVPLNIDLEAKKLAI--PHCDYYCDMMYLLPYSTFFSLPPENKRVSS-ETSST 319
K + + DL + L + H ++C+++Y LPP + +S + +S
Sbjct: 256 EGKCEVRK---KNDLASSDLPVMFEHV-FFCELIYDRASGALKQLPPNVRFMSMVQRTSA 311
Query: 320 ISSDVDANECEVGE---------PQKMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRW 370
+ + CE + P++ + LD+++GCG +S GL AG++ T+W
Sbjct: 312 LKKNKGKQICEPDQIDSGKWLDVPKENRLATLDIFAGCGGLSEGL----QQAGVSF-TKW 366
Query: 371 AVDINEYACQSLKLNHPETEV 391
A++ E A ++ NHPE V
Sbjct: 367 AIEYEEPAGEAFNKNHPEAVV 387
>gi|395518186|ref|XP_003763246.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like, partial
[Sarcophilus harrisii]
Length = 692
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 108/193 (55%), Gaps = 4/193 (2%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP GDV++ICGGPPCQG SG NRF + KN + F+ D+ +PKF L+ENV
Sbjct: 423 LPQKGDVEMICGGPPCQGFSGMNRFNTLT--YSKFKNSLIASFLSYCDYYRPKFFLLENV 480
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F + ++ + L L+QM YQ G++ AG YG+ Q R R F+ A P EKLP +
Sbjct: 481 RNFVSFKRSMVLKLTLRCLVQMGYQCTFGILQAGHYGIAQTRRRAFILAAAPGEKLPMFP 540
Query: 637 LPTHDVVLRGVIPTEFERNTVAYDEGQQAELA--RKLLLQDAISDLPSVDNYESRDEIPY 694
P H R + + N ++ A R + + D++SDLP++ N S +EI Y
Sbjct: 541 EPLHVFSTRSSLLSAVIDNKRFVSNVKRLTSAPFRTITVYDSLSDLPTIKNGASLEEISY 600
Query: 695 DREPETEFQCFIR 707
+ EP+T FQ IR
Sbjct: 601 EGEPKTWFQRQIR 613
Score = 42.4 bits (98), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 8/78 (10%)
Query: 330 EVGEPQKMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPET 389
EV P+ ++ LD++SGCG +S G + AG++ T WA+++ + A Q+ LN+P+T
Sbjct: 345 EVNVPK---LRTLDVFSGCGGLSEGF----HQAGIS-ETMWAIEMWKPAGQAFLLNYPKT 396
Query: 390 EVRNESAEDFLTLLREWE 407
V +E L ++ E
Sbjct: 397 IVLSEDCNILLKMVMSGE 414
>gi|411012957|gb|AFV99135.1| CMT-type cytosine DNA-methyltransferase 3a [Malus x domestica]
Length = 372
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 111/315 (35%), Positives = 155/315 (49%), Gaps = 70/315 (22%)
Query: 100 VKVNKNRSSSKKPIDSVKKLPVRGE--HDDDDEPEARFLGDPVPDGEARQRWPKRYEVKK 157
+V + ++S + S+ + PV E D+D E+RF G P+ D E R+++PKRY +
Sbjct: 83 ARVEEEVATSVEKAASLPRKPVTQEVAAADEDGEESRFSGKPMEDEETRKQYPKRYVGEN 142
Query: 158 Q---------------KRRNQKDDDEEEIIQAKCHYMWAEVDGHITYDLFDDAHVKAESG 202
R+ +K E I ++ + + D I + ++ K + G
Sbjct: 143 YALLAISCECSMYFTGSRKERKKCYERTITKSIA--LCFDFDPCIGAEGKEEWAKKLQRG 200
Query: 203 E--EDYICKIVEMFEAVDGTPYFTAQWYYRARDTVIESNAHLIDQRRVFFSEIQNDNPLE 260
E E YICKIVEMFEA+ G YFTAQWYYR++DTVI+ A +
Sbjct: 201 ETKEPYICKIVEMFEAIGGLLYFTAQWYYRSQDTVIKHCASVACG--------------- 245
Query: 261 CLVKKLNIARVPLNIDLEAKKLAIPHCDYYCDMMYLLPYSTFFSLPPENKRVSS------ 314
++D + K +IP C+YYCD YLLPYSTF +L +S+
Sbjct: 246 -------------HVDQDVKSKSIPVCNYYCDTKYLLPYSTFVNLQTGYCSLSTYCHDAE 292
Query: 315 -----ETSSTIS--------SDVDANECEVGEPQKMDVKLLDLYSGCGAMSTGLCLGANL 361
STIS S+VD+ + G K V+LLDLYSGCG MSTGLCL A+L
Sbjct: 293 IMQSGSDDSTISVSDDVCLDSEVDS-KLSNGVCAKSQVRLLDLYSGCGVMSTGLCLAAHL 351
Query: 362 AGLNLVT-RWAVDIN 375
A +NLVT R V I+
Sbjct: 352 ANVNLVTLRETVSID 366
>gi|357498929|ref|XP_003619753.1| DNA (cytosine-5)-methyltransferase [Medicago truncatula]
gi|355494768|gb|AES75971.1| DNA (cytosine-5)-methyltransferase [Medicago truncatula]
Length = 1573
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 74/193 (38%), Positives = 104/193 (53%), Gaps = 5/193 (2%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LPLPG VD I GGPPCQG SG NRF + + + + ++ F+ D+ +P++ L+ENV
Sbjct: 1226 LPLPGQVDFINGGPPCQGFSGMNRFNT--STWSKVQCEMILAFLSFADYFRPRYFLLENV 1283
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F KG R LA L++M YQVR G++ AGA+G+ Q R R F+W A P + LP +
Sbjct: 1284 RNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAFGVSQSRKRAFIWAASPEDVLPEWP 1343
Query: 637 LPTHDVVLRGVIPTEFERNT--VAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPY 694
P H V + N A R + ++D I +LP V N SR + Y
Sbjct: 1344 EPMH-VFSAPELKITLSENVQYAAVRSTANGAPLRAITVRDTIGELPVVGNGASRTNMEY 1402
Query: 695 DREPETEFQCFIR 707
+P + FQ IR
Sbjct: 1403 QSDPVSWFQKKIR 1415
Score = 47.4 bits (111), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 95/204 (46%), Gaps = 28/204 (13%)
Query: 207 ICKIVEMF------EAVDGTPYFTAQWYYRARDTVIESNAHLIDQRRVFFSEIQNDNPLE 260
IC+++E+ +A + + ++R D V A+ D + V++S+ ++
Sbjct: 989 ICQVLEIIAKKETKQAEIKSTDIKVRRFFRPED-VSSEKAYCSDVQEVYYSDEACTISVQ 1047
Query: 261 CLVKKLNIARVPLNIDL-EAKKLAIPHCDYYCDMMYLLPYSTFFSLPPENK-RVSSETSS 318
+ K + + ID+ E I H ++C+++Y LP K + S+ ++
Sbjct: 1048 SIEGKCEVRK---KIDVPEGCAPGIFHNIFFCELLYDPATGALKKLPAHIKVKYSTGHTA 1104
Query: 319 TISSDVDANECEVGE------PQKMD-----VKLLDLYSGCGAMSTGLCLGANLAGLNLV 367
++ +C+ G+ P++ + LD+++GCG +S GL + +G++
Sbjct: 1105 DAAARKKKGKCKEGDNISEPDPERKTSNEKRLATLDIFAGCGGLSEGL----HQSGVS-S 1159
Query: 368 TRWAVDINEYACQSLKLNHPETEV 391
T+WA++ E A + K NHPE V
Sbjct: 1160 TKWAIEYEEPAGNAFKANHPEALV 1183
>gi|162463699|ref|NP_001105186.1| DNA methyl transferase1 [Zea mays]
gi|20977598|gb|AAM28226.1| DNA methyltransferase 101 [Zea mays]
Length = 1457
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 111/194 (57%), Gaps = 7/194 (3%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP+PG+V+ I GGPPCQG SG NRF +P + + + ++ F+ ++ +P+F L+ENV
Sbjct: 1103 LPVPGEVEFINGGPPCQGFSGMNRFNQ--SPWSKVQCEMILAFLSFAEYFRPRFFLLENV 1160
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F KG R A+A L++M YQVR G++ AGA+G+ Q R R F+W A P E LP +
Sbjct: 1161 RNFVSFNKGQTFRLAVASLLEMGYQVRFGILEAGAFGVAQSRKRAFIWAAAPGEMLPDWP 1220
Query: 637 LPTHDVV---LRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIP 693
P H L+ +P + + A A R + ++D + DLP V N S+ +
Sbjct: 1221 EPMHVFASPELKITLP-DGQYYAAARSTAGGAPF-RAITVRDTVGDLPKVGNGASKLTLE 1278
Query: 694 YDREPETEFQCFIR 707
Y EP + FQ IR
Sbjct: 1279 YGGEPVSWFQKKIR 1292
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 121/261 (46%), Gaps = 41/261 (15%)
Query: 162 NQKDDDEEEIIQAKCHYMWAEVDG------HITYDLF----DDAHVKA--ESGEEDY-IC 208
N + D +E I +K +++ +V +I+ D F D A KA G + Y +C
Sbjct: 810 NIEPDSDELKIFSKTSFVYRKVTYNVNEFLYISPDFFAEDEDRATFKAGRNVGLKPYAVC 869
Query: 209 KIVEMFEAVD------GTPYFTAQWYYRARDTVIESNAHLIDQRRVFFSEIQNDNPLECL 262
+I+ + E + +A+ +YR D + + A+ D R V++SE D P++ +
Sbjct: 870 QILSIPEGAGSKKLNPASANISARRFYRP-DDISSAKAYASDIREVYYSEDVIDVPVDMI 928
Query: 263 VKKLNIARVPLNIDLEAKKLAI--PHCDYYCDMMYLLPYSTFFSLPPENKRVSS-ETSST 319
K + + DL + L + H ++C+++Y LPP + +S + +S
Sbjct: 929 EGKCEVRK---KNDLASSDLPVMFEHV-FFCELIYDRASGALKQLPPNVRFMSMVQRTSA 984
Query: 320 ISSDVDANECEVGE---------PQKMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRW 370
+ + CE + P++ + LD+++GCG +S GL AG++ T+W
Sbjct: 985 LKKNKGKQICEPDQIDSGKWLDVPKENRLATLDIFAGCGGLSEGL----QQAGVSF-TKW 1039
Query: 371 AVDINEYACQSLKLNHPETEV 391
A++ E A ++ NHPE V
Sbjct: 1040 AIEYEEPAGEAFNKNHPEAVV 1060
>gi|198416008|ref|XP_002122948.1| PREDICTED: Zn-finger (CXXC)-5 [Ciona intestinalis]
Length = 1305
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 111/197 (56%), Gaps = 12/197 (6%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP GDV+++CGGPPCQG SG NRF +++ + KN ++ ++ D+ +P+F L+ENV
Sbjct: 915 LPQKGDVELLCGGPPCQGFSGMNRFNSRE--YSRFKNSLVVSYLSYCDYYRPRFFLLENV 972
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F ++ + +LA L++M YQ G++ AG YG+ Q R R + A P E+LP Y
Sbjct: 973 RNFVSFKNCMVLKLSLAALLRMGYQCTFGVLQAGHYGVSQTRRRAIILAAAPGEQLPLYP 1032
Query: 637 LPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRD 690
P H RG V T + N + + R + + DA+SDLP + N ++
Sbjct: 1033 EPLHTFSTRGGSLSAQVGDTRYTNNI----KWSTSAPYRTITVHDAMSDLPKIPNGHAKL 1088
Query: 691 EIPYDREPETEFQCFIR 707
E+PY EP T FQ +R
Sbjct: 1089 EMPYTGEPLTHFQRMMR 1105
>gi|2654108|gb|AAC49931.1| cytosine-5 DNA methyltransferase [Pisum sativum]
Length = 1554
Score = 142 bits (358), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 105/192 (54%), Gaps = 3/192 (1%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LPLPG VD I GGPPCQG SG NRF + + + + ++ F+ D+ +P++ L+ENV
Sbjct: 1207 LPLPGQVDFINGGPPCQGFSGMNRFNT--STWSKVQCEMILAFLSFADYFRPRYFLLENV 1264
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F KG R LA L++M YQVR G++ AGA+G+ Q R R F+W A P + LP +
Sbjct: 1265 RNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAFGVSQSRKRAFIWAASPEDVLPEWP 1324
Query: 637 LPTHDVVLRGVIPTEFER-NTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYD 695
P H + T E A R + ++D I +LP+V N SR + Y
Sbjct: 1325 EPMHVFSAPELKITLAENVQYAAVCSTANGAPLRAITVRDTIGELPAVGNGASRTNMEYQ 1384
Query: 696 REPETEFQCFIR 707
+P + FQ IR
Sbjct: 1385 SDPISWFQKKIR 1396
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 95/204 (46%), Gaps = 28/204 (13%)
Query: 207 ICKIVEMF------EAVDGTPYFTAQWYYRARDTVIESNAHLIDQRRVFFSEIQNDNPLE 260
+C+++E+ +A + + ++R D V A+ D + V+FS+ ++
Sbjct: 970 VCQVLEIIAKKETKQAEIKSTELKVRRFFRPED-VSSEKAYCSDVQEVYFSDETYTISVQ 1028
Query: 261 CLVKKLNIARVPLNIDL-EAKKLAIPHCDYYCDMMYLLPYSTFFSLPPENK-RVSSETSS 318
+ K + + ID+ E H ++C+++Y + LP K + SS ++
Sbjct: 1029 SVEGKCEVRK---KIDIPEGSAPGAFHNVFFCELLYDPATGSLKKLPSHIKVKYSSGPTA 1085
Query: 319 TISSDVDANECEVGEPQKM-DVK----------LLDLYSGCGAMSTGLCLGANLAGLNLV 367
++ +C+ G+ + D+K LD+++GCGA+S GL + +G +
Sbjct: 1086 DNAARKKKGKCKEGDSISVPDIKSKTSNENRLATLDIFAGCGALSEGL----HKSGAS-S 1140
Query: 368 TRWAVDINEYACQSLKLNHPETEV 391
T+WA++ E A + K NHPE V
Sbjct: 1141 TKWAIEYEEPAGNAFKANHPEALV 1164
>gi|255573870|ref|XP_002527854.1| DNA (cytosine-5)-methyltransferase, putative [Ricinus communis]
gi|223532778|gb|EEF34557.1| DNA (cytosine-5)-methyltransferase, putative [Ricinus communis]
Length = 1584
Score = 142 bits (358), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 76/194 (39%), Positives = 103/194 (53%), Gaps = 7/194 (3%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
P PG+V+ I GGPPCQG SG NRF + + + + ++ F+ D+ +PKF L+ENV
Sbjct: 1214 FPRPGEVEFINGGPPCQGFSGMNRFNQRS--WSKVQCEMILAFLSFADYFRPKFFLLENV 1271
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F KG R LA L++M YQVR G++ AGA+G+ Q R R F+W A P E LP +
Sbjct: 1272 RNFVSFNKGNTFRLTLASLLEMGYQVRFGVLEAGAFGISQSRKRAFIWAASPEEILPEWP 1331
Query: 637 LPTHDVVLRG---VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIP 693
P H V G I A R + ++D I DLP+V N S +
Sbjct: 1332 EPMH--VFAGPELKIKLSGNSQYAAVRSTANGAPFRAITVRDTIGDLPAVGNGASLTTMQ 1389
Query: 694 YDREPETEFQCFIR 707
Y EP + FQ IR
Sbjct: 1390 YKNEPVSWFQKTIR 1403
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 82/182 (45%), Gaps = 34/182 (18%)
Query: 228 YYRARDTVIESNAHLIDQRRVFFSEIQNDNPL-----ECLVKKLNIARVPLNIDLEA-KK 281
++R+ D E NA+ D R V++SE P+ +C V+K + DL + K
Sbjct: 1002 FFRSEDISAE-NAYCSDIREVYYSEHIETFPILDIQGKCEVRKKH--------DLPSFDK 1052
Query: 282 LAIPHCDYYCDMMYLLPYSTFFSLPPENKRVSSE--------------TSSTISSDVDAN 327
LAI ++C+ +Y T LP K SS+ +D D N
Sbjct: 1053 LAIFEHIFFCEHIYDPEKGTIKQLPAHIKLSSSKERMNDDILYRKKKGKCKEGENDFDDN 1112
Query: 328 ECEVGEPQKMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHP 387
+ + LD+++GCG +S GL AG++ VT+WA++ E A ++ K NHP
Sbjct: 1113 VKRSEALSRNQLATLDIFAGCGGLSEGL----ERAGIS-VTKWAIEYEEPAGEAFKQNHP 1167
Query: 388 ET 389
E
Sbjct: 1168 EA 1169
>gi|219885163|gb|ACL52956.1| unknown [Zea mays]
Length = 385
Score = 142 bits (357), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 76/194 (39%), Positives = 111/194 (57%), Gaps = 7/194 (3%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP+PG+V+ I GGPPCQG SG NRF +P + + + ++ F+ ++ +P+F L+ENV
Sbjct: 31 LPVPGEVEFINGGPPCQGFSGMNRF--NQSPWSKVQCEMILAFLSFAEYFRPRFFLLENV 88
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F KG R A+A L++M YQVR G++ AGA+G+ Q R R F+W A P E LP +
Sbjct: 89 RNFVSFNKGQTFRLAVASLLEMGYQVRFGILEAGAFGVAQSRKRAFIWAAAPGEMLPDWP 148
Query: 637 LPTHDVV---LRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIP 693
P H L+ +P + + A A R + ++D I DLP V N S+ +
Sbjct: 149 EPMHVFASPELKITLP-DGQYYAAARSTAGGAPF-RAITVRDTIGDLPKVGNGASKLTLE 206
Query: 694 YDREPETEFQCFIR 707
Y EP + FQ IR
Sbjct: 207 YGGEPVSWFQKKIR 220
>gi|340373134|ref|XP_003385097.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Amphimedon
queenslandica]
Length = 1444
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 114/197 (57%), Gaps = 5/197 (2%)
Query: 513 KSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVL 572
+ ++LP GDV+++CGGPPCQG SG NRF +++ + KN +I ++ ++ +P+F L
Sbjct: 1052 RGQLLPQKGDVELLCGGPPCQGFSGMNRFNSRE--YSQFKNSLVISYLSFCEYYRPRFFL 1109
Query: 573 MENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKL 632
+ENV + V F K ++ + L L++M YQ G++ AG YG+PQ R R + A P EKL
Sbjct: 1110 LENVRNFVSFKKSMVLKLTLRCLVKMGYQCTFGVLQAGQYGVPQTRRRAIILAAAPGEKL 1169
Query: 633 PPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELA--RKLLLQDAISDLPSVDNYESRD 690
P + PTH R T N + Y+ + + A R + ++D++SDLP + N +
Sbjct: 1170 PHFPNPTHVFSPRACQLT-VVVNDIKYEGSIRMDSAPYRTITVRDSMSDLPHIKNGSAVR 1228
Query: 691 EIPYDREPETEFQCFIR 707
+ Y+ EP +Q +R
Sbjct: 1229 SMNYNGEPHCHYQRLMR 1245
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 5/107 (4%)
Query: 313 SSETSSTISSDVDANECEVGEPQKMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAV 372
S E+ +T S+D D + + +++LD+++GCG +S G + AG+ + WAV
Sbjct: 958 SKESIATTSTDDDKKDEITPDSSFKKLRMLDVFAGCGGLSEGF----HQAGV-ADSCWAV 1012
Query: 373 DINEYACQSLKLNHPETEVRNESAEDFLTLLREWEKLCISFSLIARK 419
+I+E A Q+ +LN+ +T V + L+L+ E K L+ +K
Sbjct: 1013 EIDEPAAQAFRLNNSQTTVFTDDCNILLSLVMEGAKTNSRGQLLPQK 1059
Score = 42.7 bits (99), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 206 YICKIVEMFEAVDGTPYFTAQWYYRARDTVIESNAHLIDQRRVFFSEIQNDNPLECLVKK 265
Y+ +I+ M+E +G F W++R+ DTV+ D R +F + DNPL ++ K
Sbjct: 590 YLTRIMSMYEDSNGKKMFHGWWFHRSTDTVLGETG---DPRELFLIDDCEDNPLGAIMDK 646
Query: 266 LNIARVP 272
+ + P
Sbjct: 647 VEVEYKP 653
>gi|213498012|emb|CAS84141.1| DNA (cytosine-5) methyltransferase [Nicotiana tomentosiformis]
Length = 395
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 107/192 (55%), Gaps = 3/192 (1%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LPLPG VD I GGPPCQG SG NRF + + + + ++ F+ D+ +PKF L+ENV
Sbjct: 80 LPLPGQVDFINGGPPCQGFSGMNRF--NQSTWSKVQCEMILAFLSFADYYRPKFFLLENV 137
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F + R +A L++M YQVR G++ AGA+G+PQ R R F+W A P E LP +
Sbjct: 138 RNFVSFNQKQTFRLTVASLLEMGYQVRFGILEAGAFGVPQSRKRAFIWAASPEEILPEWP 197
Query: 637 LPTHDVVLRGVIPTEFER-NTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYD 695
P H + + T E + A R L ++D I DLP+V N S+ I Y
Sbjct: 198 EPMHVFGVPELKITLSETCHYAAVRSTASGAPFRSLTVRDTIGDLPAVGNGASKTCIEYQ 257
Query: 696 REPETEFQCFIR 707
+P + FQ IR
Sbjct: 258 VDPISWFQRKIR 269
>gi|357119215|ref|XP_003561341.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1B-like [Brachypodium
distachyon]
Length = 1542
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 110/196 (56%), Gaps = 7/196 (3%)
Query: 515 KILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLME 574
K LP+PG+V+ I GGPPCQG SG NRF +P + + + ++ F+ ++ +P+F L+E
Sbjct: 1192 KNLPVPGEVEFINGGPPCQGFSGMNRFNQ--SPWSKVQCEMILAFLSFAEYFRPRFFLLE 1249
Query: 575 NVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPP 634
NV + V F KG R A+A L++M YQVR G++ AG +G+ Q R R F+W A P E LP
Sbjct: 1250 NVRNFVSFNKGQTFRLAVASLLEMGYQVRFGILEAGTFGVAQSRKRAFIWAAAPGEILPD 1309
Query: 635 YALPTHDVV---LRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDE 691
+ P H L+ +P + A R + ++D I DLP V+N ++
Sbjct: 1310 WPEPMHVFASPELKITLPD--GKYYAAAKSTAGGAPFRAITVRDTIGDLPKVENGANKLI 1367
Query: 692 IPYDREPETEFQCFIR 707
+ Y EP + FQ IR
Sbjct: 1368 LEYGGEPTSWFQKKIR 1383
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 106/239 (44%), Gaps = 42/239 (17%)
Query: 187 ITYDLFDDAHVKAE--SGEED---------------YICKIVEMFEAVD------GTPYF 223
+TY + D +++ E S EED +C ++++ E V +
Sbjct: 921 VTYSVHDFLYIRPEFFSQEEDRGTYKAGRNIGLKPYAVCHLLDVCEPVGSKKINPASAKV 980
Query: 224 TAQWYYRARDTVIESNAHLIDQRRVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLA 283
+ + +YR D + A+ D R V++SE + P++ + K ++ R ++I +
Sbjct: 981 SVRRFYRP-DDISSDKAYTSDIREVYYSEDIINVPVDMIEGKCDV-RKKIDISNSDLPVM 1038
Query: 284 IPHCDYYCDMMYLLPYSTFFSLPPENKRVS--SETSSTISSDVDANECEVGE-------- 333
+ H ++C+ +Y LPP K S + + + + CE +
Sbjct: 1039 VEHV-FFCEHIYDPMTGALKQLPPNVKLTSMVQKAAGALKKNKGKQICENDQVDSDKRKE 1097
Query: 334 -PQKMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEV 391
P++ + LD+++GCG +S GL AG + T+WA++ E A ++ + NHPE V
Sbjct: 1098 VPKENRISTLDIFAGCGGLSEGL----QQAGASF-TKWAIEYEEPAGEAFRQNHPEAAV 1151
>gi|297800866|ref|XP_002868317.1| hypothetical protein ARALYDRAFT_355413 [Arabidopsis lyrata subsp.
lyrata]
gi|297314153|gb|EFH44576.1| hypothetical protein ARALYDRAFT_355413 [Arabidopsis lyrata subsp.
lyrata]
Length = 1506
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 103/192 (53%), Gaps = 3/192 (1%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LPLPG VD I GGPPCQG SG NRF D + + + ++ F+ D+ +PK+ L+ENV
Sbjct: 1155 LPLPGQVDFINGGPPCQGFSGMNRF--SDRSWSKVQCEMILAFLSFADYFRPKYFLLENV 1212
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
IV F G + +A L++M YQVR G++ AGAYG+ Q R R F+W A P E LP +
Sbjct: 1213 KKIVSFNNGQTFQLTIASLLEMGYQVRFGLLEAGAYGISQPRKRAFIWAAAPNEVLPEWP 1272
Query: 637 LPTHDVVLRGV-IPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYD 695
P H G I + A + R + ++D I DLP V+N ES Y
Sbjct: 1273 EPMHVFNNPGFKISLSRGLHCAAVHNTKSGAPFRSITVRDTIGDLPPVENGESEINKKYK 1332
Query: 696 REPETEFQCFIR 707
P + FQ +R
Sbjct: 1333 DVPVSWFQKEMR 1344
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 87/174 (50%), Gaps = 19/174 (10%)
Query: 228 YYRARDTVIESNAHLIDQRRVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLAIPHC 287
+YR D +E A+ D + V++S+ P + + K + R ++ L + + H
Sbjct: 948 FYRPEDISVE-KAYASDIQEVYYSKDTYVLPPDAIKGKCEV-RKKTDMPLCREYPVLDHI 1005
Query: 288 DYYCDMMY--------LLPYSTF--FSLPPENKRVSSETSSTISSDVDANECEVGEPQKM 337
++C++ Y LP + FS ++K + + + S+ D+ + + P++M
Sbjct: 1006 -FFCELFYDSSNGYLKQLPSNMKLKFSTIKDDKLLREKKGKGVESETDSVKPDEA-PKEM 1063
Query: 338 DVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEV 391
+ LD+++GCG +S GL AG++ T+WA++ E A Q+ K NHP+ V
Sbjct: 1064 RLATLDIFAGCGGLSYGL----EKAGVS-DTKWAIEYEEPAAQAFKQNHPDATV 1112
>gi|383852983|ref|XP_003702004.1| PREDICTED: DNA (cytosine-5)-methyltransferase PliMCI-like [Megachile
rotundata]
Length = 1698
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 109/193 (56%), Gaps = 4/193 (2%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP G V+++CGGPPCQG SG NRF ++ L KN ++ ++ D+ +PKF +MENV
Sbjct: 1246 LPQKGQVELLCGGPPCQGFSGMNRFNSRQYSLF--KNSLVVSYLSYCDYYRPKFFIMENV 1303
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F K ++ + L L++M YQ G++ AG YG+PQ R R+ + A P + LP Y
Sbjct: 1304 RNFVSFKKSMVLKLTLRCLVRMGYQCTFGILQAGNYGVPQTRRRMVILAAAPGQTLPKYP 1363
Query: 637 LPTHDVVLRGVIPTEFERNTVAYDEGQQAELA--RKLLLQDAISDLPSVDNYESRDEIPY 694
PTH R + N + A R + ++DA+ DLP + N +++E+PY
Sbjct: 1364 EPTHVFSKRACQLSVLVDNKKYSSNCSWIDSAPYRTITVKDAMFDLPEIKNGWNKEEMPY 1423
Query: 695 DREPETEFQCFIR 707
+ EP + FQ +R
Sbjct: 1424 NSEPLSHFQRKMR 1436
>gi|405116965|gb|AFR91943.1| DNA cytosine-5-methyltransferase 1 [Patiria pectinifera]
Length = 1592
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 112/197 (56%), Gaps = 4/197 (2%)
Query: 513 KSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVL 572
+ + LP G+V+V+CGGPPCQG SG NRF +++ + KN + ++ D+ +PKF L
Sbjct: 1169 RGQKLPQRGEVEVLCGGPPCQGFSGMNRFNSRE--YSKFKNSLISSYLSYCDYYRPKFFL 1226
Query: 573 MENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKL 632
+ENV + V + K ++ + AL L++M YQ G++ AG YG+PQ R R + A P +KL
Sbjct: 1227 LENVRNFVSYKKNMVLKLALRCLVRMGYQCTFGVLQAGHYGVPQTRRRAIILAAAPGQKL 1286
Query: 633 PPYALPTHDVVLRGVIPTEF--ERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRD 690
P Y P H R + ER + ++ R + ++ A+SDLP + N +
Sbjct: 1287 PFYPEPNHVFAPRACQLSVLVDERKINSNISWLESAPYRTITVRAAMSDLPEIHNGHQKL 1346
Query: 691 EIPYDREPETEFQCFIR 707
EI YD EP++ FQ IR
Sbjct: 1347 EISYDGEPQSAFQRKIR 1363
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 43/70 (61%), Gaps = 5/70 (7%)
Query: 339 VKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAED 398
+K LD+++GCG +S G + AGL + WA++I+E A Q+ +LN+P + V +
Sbjct: 1101 LKSLDVFAGCGGLSEGF----HQAGL-CESNWAIEIDEPAAQAFRLNNPGSTVFTDDCNL 1155
Query: 399 FLTLLREWEK 408
L+L+ E EK
Sbjct: 1156 LLSLVMEGEK 1165
>gi|383862947|ref|XP_003706944.1| PREDICTED: DNA (cytosine-5)-methyltransferase PliMCI-like [Megachile
rotundata]
Length = 1440
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 109/193 (56%), Gaps = 4/193 (2%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP G+V+++CGGPPCQG SG NRF ++ L KN ++ + D+ +PKF +MENV
Sbjct: 1045 LPQKGEVELLCGGPPCQGFSGMNRFNSRQYSLF--KNSLVVSCLSYCDYYRPKFFIMENV 1102
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F K ++ + L L++M YQ G++ AG YG+PQ R R+ + A P E LP Y
Sbjct: 1103 RNFVSFKKSMVLKLTLRCLVRMGYQCTFGILQAGNYGIPQTRRRLIILAAAPGEVLPKYP 1162
Query: 637 LPTHDVVLRGVIPTEFERNTVAYDEGQQAELA--RKLLLQDAISDLPSVDNYESRDEIPY 694
PTH R + N E A R + ++DA+SDLP++ N +++EI Y
Sbjct: 1163 EPTHVFSKRACQLSVIVDNKKYSSNCDWTESAPYRTISVRDAMSDLPNIRNGWNKEEIAY 1222
Query: 695 DREPETEFQCFIR 707
EP + FQ IR
Sbjct: 1223 GDEPISHFQRKIR 1235
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 10/72 (13%)
Query: 334 PQKMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRN 393
P+K+ K LD+++GCG +S GL AG+ + +WA++ +E A + +LN+P T V
Sbjct: 970 PKKL--KTLDVFAGCGGLSEGL----RQAGI-IDNQWAIEKDEPAACAYRLNNPNTTV-- 1020
Query: 394 ESAEDFLTLLRE 405
ED LLR+
Sbjct: 1021 -FCEDCNVLLRK 1031
>gi|49117032|gb|AAH72774.1| Dnmt1 protein [Xenopus laevis]
Length = 1490
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 109/193 (56%), Gaps = 4/193 (2%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP GDV+++CGGPPCQG SG NRF ++ + KN ++ ++ D+ +PK+ L+ENV
Sbjct: 1086 LPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSYLSYCDYYRPKYFLLENV 1143
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F K ++ + L L++M YQ G++ AG YG+ Q R R + A P EKLP +
Sbjct: 1144 RNFVSFKKSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPMFP 1203
Query: 637 LPTHDVVLRGVIPTEF--ERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPY 694
P H R + E+ V+ + L R + ++D +SDLP + N S EI Y
Sbjct: 1204 EPLHVFAPRACTLSVVVDEKKYVSNTTRTNSSLFRTITVRDTMSDLPEIRNGASALEISY 1263
Query: 695 DREPETEFQCFIR 707
+ EP++ FQ IR
Sbjct: 1264 NGEPQSWFQRQIR 1276
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 5/70 (7%)
Query: 339 VKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAED 398
++ LD++SGCG +S G + AG++ T WA+++ E A Q+ +LN+P T V E
Sbjct: 1014 LRTLDVFSGCGGLSEGF----HQAGIS-ETNWAIEMWEPAAQAFRLNNPGTTVFTEDCNI 1068
Query: 399 FLTLLREWEK 408
L L+ EK
Sbjct: 1069 LLKLVMSGEK 1078
>gi|148225023|ref|NP_001084021.1| DNA (cytosine-5-)-methyltransferase 1 [Xenopus laevis]
gi|1731732|dbj|BAA11458.1| DNA (cytosine-5-)-methyltransferase [Xenopus laevis]
Length = 1490
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 109/193 (56%), Gaps = 4/193 (2%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP GDV+++CGGPPCQG SG NRF ++ + KN ++ ++ D+ +PK+ L+ENV
Sbjct: 1086 LPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSYLSYCDYYRPKYFLLENV 1143
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F K ++ + L L++M YQ G++ AG YG+ Q R R + A P EKLP +
Sbjct: 1144 RNFVSFKKSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIVLAAAPGEKLPMFP 1203
Query: 637 LPTHDVVLRGVIPTEF--ERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPY 694
P H R + E+ V+ + L R + ++D +SDLP + N S EI Y
Sbjct: 1204 EPLHVFAPRACTLSVVVDEKKYVSNTTRTNSSLFRTITVRDTMSDLPEIRNGASALEISY 1263
Query: 695 DREPETEFQCFIR 707
+ EP++ FQ IR
Sbjct: 1264 NGEPQSWFQRQIR 1276
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 5/70 (7%)
Query: 339 VKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAED 398
++ LD++SGCG +S G + AG++ T WA+++ E A Q+ +LN+P T V E
Sbjct: 1014 LRTLDVFSGCGGLSEGF----HQAGIS-ETNWAIEMWEPAAQAFRLNNPGTTVFTEDCNI 1068
Query: 399 FLTLLREWEK 408
L L+ EK
Sbjct: 1069 LLKLVMSGEK 1078
>gi|257096314|sp|B1Q3J6.1|DNM1B_ORYSJ RecName: Full=DNA (cytosine-5)-methyltransferase 1B; Short=OsMET1b;
AltName: Full=DNA methyltransferase 1-2; Short=OsMET1-2
gi|171196103|dbj|BAG15929.1| putative cytosine-5 DNA methyltransferase [Oryza sativa Japonica
Group]
Length = 1529
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 108/194 (55%), Gaps = 7/194 (3%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP+PG+V+ I GGPPCQG SG NRF +P + + + ++ F+ ++ +P+F L+ENV
Sbjct: 1183 LPVPGEVEFINGGPPCQGFSGMNRFNQ--SPWSKVQCEMILAFLSFAEYFRPRFFLLENV 1240
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F KG R +A L++M YQVR G++ AG +G+ Q R R F+W A P E LP +
Sbjct: 1241 RNFVSFNKGQTFRLTVASLLEMGYQVRFGILEAGTFGVAQSRKRAFIWAAAPGETLPDWP 1300
Query: 637 LPTHDVV---LRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIP 693
P H L+ +P + A R + ++D I DLP V+N S+ +
Sbjct: 1301 EPMHVFASPELKINLPD--GKYYAAAKSTAGGAPFRAITVRDTIGDLPKVENGASKLLLE 1358
Query: 694 YDREPETEFQCFIR 707
Y EP + FQ IR
Sbjct: 1359 YGGEPISWFQKKIR 1372
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 125/266 (46%), Gaps = 51/266 (19%)
Query: 163 QKDDDEEEI-IQAKCHYMWAEVDGHITYDLFDDAHVKAE--SGEED-------------- 205
QK+ D +E+ I +K +++ +ITY++ D +++ + S EED
Sbjct: 889 QKEPDCDELQILSKNSFIYR----NITYNVNDYLYIRPDFFSQEEDRATFKGGRNVGLKP 944
Query: 206 -YICKIVEMFEAVD------GTPYFTAQWYYRARDTVIESNAHLIDQRRVFFSEIQNDNP 258
+C ++++ E + + + +YR D + + A++ D R V++SE P
Sbjct: 945 YVVCHLLDVHEPAGSRKIHPASTKISVRRFYRP-DDISSAKAYVSDIREVYYSENIVKVP 1003
Query: 259 LECLVKKLNIARVPLNIDLEAKKLAIPHCDYYCDMMYLLPYSTFFSLPPENKRVSSETSS 318
++ + K + + ++I + + H +++C+ Y LPP K +S + +
Sbjct: 1004 VDMIEGKCEVKK-KIDISNSDVPVMVEH-EFFCEHFYDPATGALKQLPPNVKLMSVQQKA 1061
Query: 319 TI------------SSDVDANEC-EVGEPQKMDVKLLDLYSGCGAMSTGLCLGANLAGLN 365
T S VD+++C +V + ++ LD+++GCG +S GL AG++
Sbjct: 1062 TGALKKNKGKQICESDQVDSDKCTKVSKENRLAT--LDIFAGCGGLSEGL----QQAGVS 1115
Query: 366 LVTRWAVDINEYACQSLKLNHPETEV 391
T+WA++ E A ++ NHPE V
Sbjct: 1116 F-TKWAIEYEEPAGEAFTKNHPEAAV 1140
>gi|15239810|ref|NP_199727.1| DNA (cytosine-5)-methyltransferase 1 [Arabidopsis thaliana]
gi|462650|sp|P34881.1|DNMT1_ARATH RecName: Full=DNA (cytosine-5)-methyltransferase 1; AltName: Full=DNA
methyltransferase 01; AltName: Full=DNA methyltransferase
2; AltName: Full=DNA methyltransferase AthI; Short=DNA
Metase AthI; Short=M.AthI; AltName: Full=DNA
methyltransferase DDM2; AltName: Full=Protein DECREASED
DNA METHYLATION 2
gi|304107|gb|AAA32829.1| cytosine-5 methyltransferase [Arabidopsis thaliana]
gi|10177145|dbj|BAB10334.1| DNA (cytosine-5)-methyltransferase [Arabidopsis thaliana]
gi|332008394|gb|AED95777.1| DNA (cytosine-5)-methyltransferase 1 [Arabidopsis thaliana]
Length = 1534
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 77/195 (39%), Positives = 107/195 (54%), Gaps = 9/195 (4%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LPLPG VD I GGPPCQG SG NRF + + + + ++ F+ D+ +P++ L+ENV
Sbjct: 1183 LPLPGQVDFINGGPPCQGFSGMNRFNQ--SSWSKVQCEMILAFLSFADYFRPRYFLLENV 1240
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
V F KG + LA L++M YQVR G++ AGAYG+ Q R R F+W A P E LP +
Sbjct: 1241 RTFVSFNKGQTFQLTLASLLEMGYQVRFGILEAGAYGVSQSRKRAFIWAAAPEEVLPEWP 1300
Query: 637 LPTHDVVLRGVIPTEFE-RNTVAYDEGQQAELA---RKLLLQDAISDLPSVDNYESRDEI 692
P H + GV + + Y + L R + ++D I DLPSV+N +SR
Sbjct: 1301 EPMH---VFGVPKLKISLSQGLHYAAVRSTALGAPFRPITVRDTIGDLPSVENGDSRTNK 1357
Query: 693 PYDREPETEFQCFIR 707
Y + FQ IR
Sbjct: 1358 EYKEVAVSWFQKEIR 1372
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 96/204 (47%), Gaps = 30/204 (14%)
Query: 207 ICKIVEMF-----EAVDGTPYFTAQWYYRARDTVIESNAHLIDQRRVFFSEIQNDNPLEC 261
+C+++E+ +A G+ + +YR D E A+ D + ++FS+ P
Sbjct: 948 VCQLLEIVPKESRKADLGSFDVKVRRFYRPEDVSAE-KAYASDIQELYFSQDTVVLPPGA 1006
Query: 262 LVKKLNIAR---VPLNIDLEAKKLAIPHCDYYCDMMYLLPYSTFFSLP----PENKRVSS 314
L K + + +PL +++ I ++CD+ + + LP P+ +
Sbjct: 1007 LEGKCEVRKKSDMPL-----SREYPISDHIFFCDLFFDTSKGSLKQLPANMKPKFSTIKD 1061
Query: 315 ET------SSTISSDVDANECEVGEPQK-MDVKLLDLYSGCGAMSTGLCLGANLAGLNLV 367
+T + S++++ + EP K + + LD+++GCG +S GL AG++
Sbjct: 1062 DTLLRKKKGKGVESEIESEIVKPVEPPKEIRLATLDIFAGCGGLSHGL----KKAGVS-D 1116
Query: 368 TRWAVDINEYACQSLKLNHPETEV 391
+WA++ E A Q+ K NHPE+ V
Sbjct: 1117 AKWAIEYEEPAGQAFKQNHPESTV 1140
>gi|37201980|tpg|DAA01513.1| TPA_exp: putative cytosine-5 DNA methyltransferase [Oryza sativa
(japonica cultivar-group)]
Length = 1497
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 108/194 (55%), Gaps = 7/194 (3%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP+PG+V+ I GGPPCQG SG NRF +P + + + ++ F+ ++ +P+F L+ENV
Sbjct: 1151 LPVPGEVEFINGGPPCQGFSGMNRFNQ--SPWSKVQCEMILAFLSFAEYFRPRFFLLENV 1208
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F KG R +A L++M YQVR G++ AG +G+ Q R R F+W A P E LP +
Sbjct: 1209 RNFVSFNKGQTFRLTVASLLEMGYQVRFGILEAGTFGVAQSRKRAFIWAAAPGETLPDWP 1268
Query: 637 LPTHDVV---LRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIP 693
P H L+ +P + A R + ++D I DLP V+N S+ +
Sbjct: 1269 EPMHVFASPELKINLPD--GKYYAAAKSTAGGAPFRAITVRDTIGDLPKVENGASKLLLE 1326
Query: 694 YDREPETEFQCFIR 707
Y EP + FQ IR
Sbjct: 1327 YGGEPISWFQKKIR 1340
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 125/266 (46%), Gaps = 51/266 (19%)
Query: 163 QKDDDEEEI-IQAKCHYMWAEVDGHITYDLFDDAHVKAE--SGEED-------------- 205
QK+ D +E+ I +K +++ +ITY++ D +++ E S EED
Sbjct: 857 QKEPDCDELQILSKNSFIYR----NITYNVNDYLYIRPEFFSQEEDRATFKGGRNVGLKP 912
Query: 206 -YICKIVEMFEAVD------GTPYFTAQWYYRARDTVIESNAHLIDQRRVFFSEIQNDNP 258
+C ++++ E + + + +YR D + + A++ D R V++SE P
Sbjct: 913 YVVCHLLDVHEPAGSRKIHPASTKISVRRFYRP-DDISSAKAYVSDIREVYYSENIVKVP 971
Query: 259 LECLVKKLNIARVPLNIDLEAKKLAIPHCDYYCDMMYLLPYSTFFSLPPENKRVSSETSS 318
++ + K + + ++I + + H +++C+ Y LPP K +S + +
Sbjct: 972 VDMIEGKCEVKK-KIDISNSDVPVMVEH-EFFCEHFYDPATGALKQLPPNVKLMSVQQKA 1029
Query: 319 TI------------SSDVDANEC-EVGEPQKMDVKLLDLYSGCGAMSTGLCLGANLAGLN 365
T S VD+++C +V + ++ LD+++GCG +S GL AG++
Sbjct: 1030 TGALKKNKGKQICESDQVDSDKCTKVSKENRLAT--LDIFAGCGGLSEGL----QQAGVS 1083
Query: 366 LVTRWAVDINEYACQSLKLNHPETEV 391
T+WA++ E A ++ NHPE V
Sbjct: 1084 F-TKWAIEYEEPAGEAFTKNHPEAAV 1108
>gi|222636555|gb|EEE66687.1| hypothetical protein OsJ_23341 [Oryza sativa Japonica Group]
Length = 1555
Score = 139 bits (351), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 108/194 (55%), Gaps = 7/194 (3%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP+PG+V+ I GGPPCQG SG NRF +P + + + ++ F+ ++ +P+F L+ENV
Sbjct: 1209 LPVPGEVEFINGGPPCQGFSGMNRFNQ--SPWSKVQCEMILAFLSFAEYFRPRFFLLENV 1266
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F KG R +A L++M YQVR G++ AG +G+ Q R R F+W A P E LP +
Sbjct: 1267 RNFVSFNKGQTFRLTVASLLEMGYQVRFGILEAGTFGVAQSRKRAFIWAAAPGETLPDWP 1326
Query: 637 LPTHDVV---LRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIP 693
P H L+ +P + A R + ++D I DLP V+N S+ +
Sbjct: 1327 EPMHVFASPELKINLPD--GKYYAAAKSTAGGAPFRAITVRDTIGDLPKVENGASKLLLE 1384
Query: 694 YDREPETEFQCFIR 707
Y EP + FQ IR
Sbjct: 1385 YGGEPISWFQKKIR 1398
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 125/266 (46%), Gaps = 51/266 (19%)
Query: 163 QKDDDEEEI-IQAKCHYMWAEVDGHITYDLFDDAHVKAE--SGEED-------------- 205
QK+ D +E+ I +K +++ +ITY++ D +++ + S EED
Sbjct: 915 QKEPDCDELQILSKNSFIYR----NITYNVNDYLYIRPDFFSQEEDRATFKGGRNVGLKP 970
Query: 206 -YICKIVEMFEAVD------GTPYFTAQWYYRARDTVIESNAHLIDQRRVFFSEIQNDNP 258
+C ++++ E + + + +YR D + + A++ D R V++SE P
Sbjct: 971 YVVCHLLDVHEPAGSRKIHPASTKISVRRFYRP-DDISSAKAYVSDIREVYYSENIVKVP 1029
Query: 259 LECLVKKLNIARVPLNIDLEAKKLAIPHCDYYCDMMYLLPYSTFFSLPPENKRVSSETSS 318
++ + K + + ++I + + H +++C+ Y LPP K +S + +
Sbjct: 1030 VDMIEGKCEVKK-KIDISNSDVPVMVEH-EFFCEHFYDPATGALKQLPPNVKLMSVQQKA 1087
Query: 319 TI------------SSDVDANEC-EVGEPQKMDVKLLDLYSGCGAMSTGLCLGANLAGLN 365
T S VD+++C +V + ++ LD+++GCG +S GL AG++
Sbjct: 1088 TGALKKNKGKQICESDQVDSDKCTKVSKENRLAT--LDIFAGCGGLSEGL----QQAGVS 1141
Query: 366 LVTRWAVDINEYACQSLKLNHPETEV 391
T+WA++ E A ++ NHPE V
Sbjct: 1142 F-TKWAIEYEEPAGEAFTKNHPEAAV 1166
>gi|171196104|dbj|BAG15930.1| putative cytosine-5 DNA methyltransferase [Oryza sativa Japonica
Group]
Length = 1486
Score = 139 bits (351), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 108/194 (55%), Gaps = 7/194 (3%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP+PG+V+ I GGPPCQG SG NRF +P + + + ++ F+ ++ +P+F L+ENV
Sbjct: 1140 LPVPGEVEFINGGPPCQGFSGMNRFNQ--SPWSKVQCEMILAFLSFAEYFRPRFFLLENV 1197
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F KG R +A L++M YQVR G++ AG +G+ Q R R F+W A P E LP +
Sbjct: 1198 RNFVSFNKGQTFRLTVASLLEMGYQVRFGILEAGTFGVAQSRKRAFIWAAAPGETLPDWP 1257
Query: 637 LPTHDVV---LRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIP 693
P H L+ +P + A R + ++D I DLP V+N S+ +
Sbjct: 1258 EPMHVFASPELKINLPD--GKYYAAAKSTAGGAPFRAITVRDTIGDLPKVENGASKLLLE 1315
Query: 694 YDREPETEFQCFIR 707
Y EP + FQ IR
Sbjct: 1316 YGGEPISWFQKKIR 1329
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 125/266 (46%), Gaps = 51/266 (19%)
Query: 163 QKDDDEEEI-IQAKCHYMWAEVDGHITYDLFDDAHVKAE--SGEED-------------- 205
QK+ D +E+ I +K +++ +ITY++ D +++ + S EED
Sbjct: 846 QKEPDCDELQILSKNSFIYR----NITYNVNDYLYIRPDFFSQEEDRATFKGGRNVGLKP 901
Query: 206 -YICKIVEMFEAVD------GTPYFTAQWYYRARDTVIESNAHLIDQRRVFFSEIQNDNP 258
+C ++++ E + + + +YR D + + A++ D R V++SE P
Sbjct: 902 YVVCHLLDVHEPAGSRKIHPASTKISVRRFYRP-DDISSAKAYVSDIREVYYSENIVKVP 960
Query: 259 LECLVKKLNIARVPLNIDLEAKKLAIPHCDYYCDMMYLLPYSTFFSLPPENKRVSSETSS 318
++ + K + + ++I + + H +++C+ Y LPP K +S + +
Sbjct: 961 VDMIEGKCEVKK-KIDISNSDVPVMVEH-EFFCEHFYDPATGALKQLPPNVKLMSVQQKA 1018
Query: 319 TI------------SSDVDANEC-EVGEPQKMDVKLLDLYSGCGAMSTGLCLGANLAGLN 365
T S VD+++C +V + ++ LD+++GCG +S GL AG++
Sbjct: 1019 TGALKKNKGKQICESDQVDSDKCTKVSKENRLAT--LDIFAGCGGLSEGL----QQAGVS 1072
Query: 366 LVTRWAVDINEYACQSLKLNHPETEV 391
T+WA++ E A ++ NHPE V
Sbjct: 1073 F-TKWAIEYEEPAGEAFTKNHPEAAV 1097
>gi|15236413|ref|NP_193150.1| DNA methyltransferase 2 [Arabidopsis thaliana]
gi|2244770|emb|CAB10193.1| (cytosine-5-)-methyltransferase [Arabidopsis thaliana]
gi|7268119|emb|CAB78456.1| (cytosine-5-)-methyltransferase [Arabidopsis thaliana]
gi|332657979|gb|AEE83379.1| DNA methyltransferase 2 [Arabidopsis thaliana]
Length = 1519
Score = 139 bits (351), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 76/194 (39%), Positives = 105/194 (54%), Gaps = 7/194 (3%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LPLPG VD I GGPPCQG SG NRF + + + + ++ F+ D+ +PK+ L+ENV
Sbjct: 1168 LPLPGQVDFINGGPPCQGFSGMNRFSH--GSWSKVQCEMILAFLSFADYFRPKYFLLENV 1225
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
V + KG + +A L++M YQVR G++ AG YG+ Q R RV +W A P E LP +
Sbjct: 1226 KKFVTYNKGRTFQLTMASLLEMGYQVRFGILEAGTYGVSQPRKRVIIWAASPEEVLPEWP 1285
Query: 637 LPTHDVVLRGVIPTEFERNTVAYDEGQQAELA---RKLLLQDAISDLPSVDNYESRDEIP 693
P H V R + YD G + R + ++D I DLP V+N ES+
Sbjct: 1286 EPMH-VFDNPGSKISLPRG-LRYDAGCNTKFGAPFRSITVRDTIGDLPPVENGESKINKE 1343
Query: 694 YDREPETEFQCFIR 707
Y P + FQ IR
Sbjct: 1344 YGTTPASWFQKKIR 1357
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 77/179 (43%), Gaps = 26/179 (14%)
Query: 228 YYRARDTVIESNAHLIDQRRVFFSEIQNDNPLECLVKKLNIAR---VPLNIDLEAKKLAI 284
+YR D + E A+ D + +++S+ P E + K + + +PL ++ I
Sbjct: 958 FYRPED-ISEEKAYASDIQELYYSQDTYILPPEAIQGKCEVRKKSDMPL-----CREYPI 1011
Query: 285 PHCDYYCDMMYLLPYSTFFSLPPENK-RVSSETSSTISSDVDANECEVGEPQKMDVK--- 340
++C++ Y P K + S+ T+ + E G M +K
Sbjct: 1012 LDHIFFCEVFYDSSTGYLKQFPANMKLKFSTIKDETLLREKKGKGVETGTSSGMLMKPDE 1071
Query: 341 --------LLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEV 391
LD+++GCG +S GL AG++ T+WA++ E A + K NHPE V
Sbjct: 1072 VPKEKPLATLDIFAGCGGLSHGL----ENAGVS-TTKWAIEYEEPAGHAFKQNHPEATV 1125
>gi|218199194|gb|EEC81621.1| hypothetical protein OsI_25142 [Oryza sativa Indica Group]
Length = 1538
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 108/194 (55%), Gaps = 7/194 (3%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP+PG+V+ I GGPPCQG SG NRF +P + + + ++ F+ ++ +P+F L+ENV
Sbjct: 1192 LPVPGEVEFINGGPPCQGFSGMNRFNQ--SPWSKVQCEMILAFLSFAEYFRPRFFLLENV 1249
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F KG R +A L++M YQVR G++ AG +G+ Q R R F+W A P E LP +
Sbjct: 1250 RNFVSFNKGQTFRLTVASLLEMGYQVRFGILEAGTFGVAQSRKRAFIWAAAPGETLPDWP 1309
Query: 637 LPTHDVV---LRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIP 693
P H L+ +P + A R + ++D I DLP V+N S+ +
Sbjct: 1310 EPMHVFASPELKINLPD--GKYYAAAKSTAGGAPFRAITVRDTIGDLPKVENGASKLLLE 1367
Query: 694 YDREPETEFQCFIR 707
Y EP + FQ IR
Sbjct: 1368 YGGEPISWFQKKIR 1381
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 125/266 (46%), Gaps = 51/266 (19%)
Query: 163 QKDDDEEEI-IQAKCHYMWAEVDGHITYDLFDDAHVKAE--SGEED-------------- 205
QK+ D +E+ I +K +++ +ITY++ D +++ E S EED
Sbjct: 898 QKEPDCDELQILSKNSFIYR----NITYNVNDYLYIRPEFFSQEEDRATFKGGRNVGLKP 953
Query: 206 -YICKIVEMFEAVD------GTPYFTAQWYYRARDTVIESNAHLIDQRRVFFSEIQNDNP 258
+C ++++ E + + + +YR D + + A++ D R V++SE P
Sbjct: 954 YVVCHLLDVHEPAGSRKIHPASTKISVRRFYRP-DDISSAKAYVSDIREVYYSENIVKVP 1012
Query: 259 LECLVKKLNIARVPLNIDLEAKKLAIPHCDYYCDMMYLLPYSTFFSLPPENKRVSSETSS 318
++ + K + + ++I + + H +++C+ Y LPP K +S + +
Sbjct: 1013 VDMIEGKCEVKK-KIDISNSDVPVMVEH-EFFCEHFYDPATGALKQLPPNVKLMSVQQKA 1070
Query: 319 TI------------SSDVDANEC-EVGEPQKMDVKLLDLYSGCGAMSTGLCLGANLAGLN 365
T S VD+++C +V + ++ LD+++GCG +S GL AG++
Sbjct: 1071 TGALKKNKGKQICESDQVDSDKCTKVSKENRLAT--LDIFAGCGGLSQGL----QQAGVS 1124
Query: 366 LVTRWAVDINEYACQSLKLNHPETEV 391
T+WA++ E A ++ NHPE V
Sbjct: 1125 F-TKWAIEYEEPAGEAFTKNHPEAAV 1149
>gi|209978474|gb|ACJ04671.1| DNA methyltransferase 1 [Carassius auratus]
Length = 1503
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 108/193 (55%), Gaps = 4/193 (2%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP GDV+++CGGPPCQG SG NRF ++ + KN + ++ D+ +PKF L+ENV
Sbjct: 1098 LPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSAFKNSLAVSYLSYCDYYRPKFFLLENV 1155
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F + ++ + L L++M YQ G++ AG YG+ Q R R + A P EKLP +
Sbjct: 1156 RNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPRFP 1215
Query: 637 LPTHDVVLRGVIPTEF--ERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPY 694
P H R P+ E+ V+ + R + ++D +SDLP + N + EI Y
Sbjct: 1216 EPLHVFAPRACSPSVVVDEKRYVSNVTRGNGGIYRTITVRDTMSDLPEIRNGAAALEISY 1275
Query: 695 DREPETEFQCFIR 707
+ EP++ FQ IR
Sbjct: 1276 NGEPQSWFQRHIR 1288
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 330 EVGEPQKMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPET 389
E EP ++ LD++SGCG +S G + AG++ T WA+++ + A Q+ +LN+P T
Sbjct: 1017 EPQEPTVPKLRTLDVFSGCGGLSEGF----HQAGIS-ETHWAIEMWDPAAQAFRLNNPGT 1071
Query: 390 EVRNESAEDFLTLLREWEKLCISFSLIARKDPQQ 423
V E L L+ EK + + +K PQ+
Sbjct: 1072 TVFTEDCNVLLKLVMSGEKT----NSLGQKLPQK 1101
>gi|6523846|gb|AAF14882.1|AF138283_1 cytosine-5 methyltransferase [Arabidopsis thaliana]
Length = 1517
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 76/194 (39%), Positives = 105/194 (54%), Gaps = 7/194 (3%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LPLPG VD I GGPPCQG SG NRF + + + + ++ F+ D+ +PK+ L+ENV
Sbjct: 1166 LPLPGQVDFINGGPPCQGFSGMNRFSH--GSWSKVQCEMILAFLSFADYFRPKYFLLENV 1223
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
V + KG + +A L++M YQVR G++ AG YG+ Q R RV +W A P E LP +
Sbjct: 1224 KKFVTYNKGRTFQLTMASLLEMGYQVRFGILEAGTYGVSQPRKRVIIWAASPEEVLPEWP 1283
Query: 637 LPTHDVVLRGVIPTEFERNTVAYDEGQQAELA---RKLLLQDAISDLPSVDNYESRDEIP 693
P H V R + YD G + R + ++D I DLP V+N ES+
Sbjct: 1284 EPMH-VFDNPGSKISLPRG-LRYDAGCNTKFGAPFRSITVRDTIGDLPPVENGESKINKE 1341
Query: 694 YDREPETEFQCFIR 707
Y P + FQ IR
Sbjct: 1342 YGTTPASWFQKKIR 1355
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 77/179 (43%), Gaps = 26/179 (14%)
Query: 228 YYRARDTVIESNAHLIDQRRVFFSEIQNDNPLECLVKKLNIAR---VPLNIDLEAKKLAI 284
+YR D + E A+ D + +++S+ P E + K + + +PL ++ I
Sbjct: 956 FYRPED-ISEEKAYASDIQELYYSQDTYILPPEAIQGKCEVRKKSDMPL-----CREYPI 1009
Query: 285 PHCDYYCDMMYLLPYSTFFSLPPENK-RVSSETSSTISSDVDANECEVGEPQKMDVK--- 340
++C++ Y P K + S+ T+ + E G M +K
Sbjct: 1010 LDHIFFCEVFYDSSTGYLKQFPANMKLKFSTIKDETLLREKKGKGVETGTSSGMLMKPDE 1069
Query: 341 --------LLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEV 391
LD+++GCG +S GL AG++ T+WA++ E A + K NHPE V
Sbjct: 1070 VPKEKPLATLDIFAGCGGLSHGL----ENAGVS-TTKWAIEYEEPAGHAFKQNHPEATV 1123
>gi|50509186|dbj|BAD30340.1| putative DNA methyltransferase [Oryza sativa Japonica Group]
Length = 1548
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 108/194 (55%), Gaps = 7/194 (3%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP+PG+V+ I GGPPCQG SG NRF +P + + + ++ F+ ++ +P+F L+ENV
Sbjct: 1202 LPVPGEVEFINGGPPCQGFSGMNRFNQ--SPWSKVQCEMILAFLSFAEYFRPRFFLLENV 1259
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F KG R +A L++M YQVR G++ AG +G+ Q R R F+W A P E LP +
Sbjct: 1260 RNFVSFNKGQTFRLTVASLLEMGYQVRFGILEAGTFGVAQSRKRAFIWAAAPGETLPDWP 1319
Query: 637 LPTHDVV---LRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIP 693
P H L+ +P + A R + ++D I DLP V+N S+ +
Sbjct: 1320 EPMHVFASPELKINLPD--GKYYAAAKSTAGGAPFRAITVRDTIGDLPKVENGASKLLLE 1377
Query: 694 YDREPETEFQCFIR 707
Y EP + FQ IR
Sbjct: 1378 YGGEPISWFQKKIR 1391
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 73/151 (48%), Gaps = 34/151 (22%)
Query: 267 NIARVPLNIDLEAK-----KLAIPHCD--------YYCDMMYLLPYSTFFSLPPENKRVS 313
NI +VP+++ +E K K+ I + D ++C+ Y LPP K +S
Sbjct: 1017 NIVKVPVDM-IEGKCEVKKKIDISNSDVPVMVEHEFFCEHFYDPATGALKQLPPNVKLMS 1075
Query: 314 SETSSTI------------SSDVDANEC-EVGEPQKMDVKLLDLYSGCGAMSTGLCLGAN 360
+ +T S VD+++C +V + ++ LD+++GCG +S GL
Sbjct: 1076 VQQKATGALKKNKGKQICESDQVDSDKCTKVSKENRLAT--LDIFAGCGGLSEGL----Q 1129
Query: 361 LAGLNLVTRWAVDINEYACQSLKLNHPETEV 391
AG++ T+WA++ E A ++ NHPE V
Sbjct: 1130 QAGVSF-TKWAIEYEEPAGEAFTKNHPEAAV 1159
>gi|334186509|ref|NP_001190725.1| DNA methyltransferase 2 [Arabidopsis thaliana]
gi|332657980|gb|AEE83380.1| DNA methyltransferase 2 [Arabidopsis thaliana]
Length = 1545
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 76/194 (39%), Positives = 105/194 (54%), Gaps = 7/194 (3%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LPLPG VD I GGPPCQG SG NRF + + + + ++ F+ D+ +PK+ L+ENV
Sbjct: 1194 LPLPGQVDFINGGPPCQGFSGMNRFSH--GSWSKVQCEMILAFLSFADYFRPKYFLLENV 1251
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
V + KG + +A L++M YQVR G++ AG YG+ Q R RV +W A P E LP +
Sbjct: 1252 KKFVTYNKGRTFQLTMASLLEMGYQVRFGILEAGTYGVSQPRKRVIIWAASPEEVLPEWP 1311
Query: 637 LPTHDVVLRGVIPTEFERNTVAYDEGQQAELA---RKLLLQDAISDLPSVDNYESRDEIP 693
P H G R + YD G + R + ++D I DLP V+N ES+
Sbjct: 1312 EPMHVFDNPGS-KISLPRG-LRYDAGCNTKFGAPFRSITVRDTIGDLPPVENGESKINKE 1369
Query: 694 YDREPETEFQCFIR 707
Y P + FQ IR
Sbjct: 1370 YGTTPASWFQKKIR 1383
>gi|110765384|ref|XP_001122269.1| PREDICTED: DNA (cytosine-5)-methyltransferase PliMCI [Apis mellifera]
Length = 1427
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 108/193 (55%), Gaps = 4/193 (2%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP G+V+++CGGPPCQG SG NRF ++ L KN ++ + D+ +PKF +MENV
Sbjct: 1028 LPQKGEVELLCGGPPCQGFSGMNRFNSRQYSLF--KNSLVVSCLSYCDYYRPKFFIMENV 1085
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F + ++ + L L++M YQ G++ AG YG+PQ R R+ + A P E LP Y
Sbjct: 1086 RNFVSFKRSMVLKLTLRCLVRMGYQCTFGILQAGNYGIPQTRRRLIILAAAPGEVLPKYP 1145
Query: 637 LPTHDVVLRGVIPTEFERNTVAYDEGQQAELA--RKLLLQDAISDLPSVDNYESRDEIPY 694
PTH R + N E A R + ++DA+SDLP++ N + +EI Y
Sbjct: 1146 EPTHVFSKRACQLSVIVDNKKYSSNCDWTESAPYRTISVRDAMSDLPNIRNGWNNEEIAY 1205
Query: 695 DREPETEFQCFIR 707
EP + FQ +R
Sbjct: 1206 SDEPISHFQRKVR 1218
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 12/91 (13%)
Query: 315 ETSSTISSDVDANECEVGEPQKMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDI 374
ETS D N C+V P+K+ K LD+++GCG +S GL AG+ + +WA++
Sbjct: 936 ETSDKKIIDKPINYCKV--PKKL--KTLDVFAGCGGLSEGL----RQAGI-VDNQWAIEK 986
Query: 375 NEYACQSLKLNHPETEVRNESAEDFLTLLRE 405
+E A + +LN+P T V ED LLR+
Sbjct: 987 DEPAACAYRLNNPNTTV---FCEDCNVLLRK 1014
>gi|182765469|ref|NP_001116832.1| uncharacterized protein LOC100036795 [Xenopus laevis]
gi|171846414|gb|AAI61682.1| LOC100036795 protein [Xenopus laevis]
Length = 1492
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 74/195 (37%), Positives = 110/195 (56%), Gaps = 8/195 (4%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP GDV+++CGGPPCQG SG NRF ++ + KN ++ ++ D+ +PKF L+ENV
Sbjct: 1088 LPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSYLSYCDYYRPKFFLLENV 1145
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F ++ + L L++M YQ G++ AG YG+ Q R R + A P EKLP +
Sbjct: 1146 RNFVSFKSSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIVLAAAPGEKLPMFP 1205
Query: 637 LPTHDVVLR----GVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEI 692
P H R GV+ E+ V+ + L R + ++D +SDLP + N S EI
Sbjct: 1206 EPLHVFAPRACSLGVVVD--EKKYVSNITRTSSSLFRTITVRDTMSDLPEIRNGASALEI 1263
Query: 693 PYDREPETEFQCFIR 707
Y+ EP++ FQ IR
Sbjct: 1264 SYNGEPQSWFQRQIR 1278
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 5/70 (7%)
Query: 339 VKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAED 398
++ LD++SGCG +S G + AG++ T WA+++ E A Q+ +LN+P T V E
Sbjct: 1016 LRTLDVFSGCGGLSEGF----HQAGIS-ETNWAIEMWEPAAQAFRLNNPGTTVFTEDCNV 1070
Query: 399 FLTLLREWEK 408
L L+ EK
Sbjct: 1071 LLKLVMSGEK 1080
>gi|443691961|gb|ELT93682.1| hypothetical protein CAPTEDRAFT_160905 [Capitella teleta]
Length = 1334
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 109/194 (56%), Gaps = 6/194 (3%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP G+V+++CGGPPCQG SG NRF +++ + KN + ++ D+ +PKF L+ENV
Sbjct: 873 LPQKGEVELLCGGPPCQGFSGMNRFNSREYSMF--KNSLIASYLSYCDYYRPKFFLLENV 930
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F + ++ + AL L++M YQ G++ AG YG+PQ R R + A P EKLP Y
Sbjct: 931 RNFVSFKRSMVLKLALRCLLRMGYQCTFGVLQAGNYGVPQTRRRAIILAAAPGEKLPFYP 990
Query: 637 LPTHDVVLRGV---IPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIP 693
P H RG+ + +R A R + ++DA+SDLP V N ++I
Sbjct: 991 EPLHVFAPRGMQLSVQVGDKRYNSCVQRMSSAPF-RTISVRDAMSDLPEVKNGAKAEKIS 1049
Query: 694 YDREPETEFQCFIR 707
Y E ++ FQ IR
Sbjct: 1050 YSVEAQSHFQRMIR 1063
Score = 43.1 bits (100), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 9/99 (9%)
Query: 141 PDGEARQRWPKRYEVKKQKRRNQKDDDEEEIIQA--KCHYMWAEVDGHITYDLFDDAHVK 198
P GEA+ R +K +K+++Q + + E +++ K Y A ++G I + D VK
Sbjct: 374 PKGEAKSRM-----LKFKKQKSQLEWEGEPVLKKSKKTFYASARLNGEIL-SVGDYVSVK 427
Query: 199 AESGEED-YICKIVEMFEAVDGTPYFTAQWYYRARDTVI 236
+ YI +I +E DGT F AQWY R DTV+
Sbjct: 428 PDDPSTPVYIAQIKYFYEDSDGTMMFHAQWYSRGSDTVL 466
>gi|68655480|emb|CAJ01710.1| putative cytosine-5 DNA methyltransferase [Hordeum vulgare subsp.
vulgare]
Length = 251
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 75/196 (38%), Positives = 110/196 (56%), Gaps = 7/196 (3%)
Query: 515 KILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLME 574
K LP+PG+V+ I GGPPCQG SG NRF +P + + + ++ F+ ++ +P+F L+E
Sbjct: 55 KNLPVPGEVEFINGGPPCQGFSGMNRF--NQSPWSKVQCEMILAFLSFAEYFRPRFFLLE 112
Query: 575 NVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPP 634
NV + V F KG R A+A L++M YQVR G++ AG +G+ Q R R F+W A P E LP
Sbjct: 113 NVRNFVSFNKGQTFRLAVASLLEMGYQVRFGILEAGTFGVAQSRKRAFIWAAAPGENLPD 172
Query: 635 YALPTHDVV---LRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDE 691
+ P H L+ +P + A R + ++D I DLP V+N S+
Sbjct: 173 WPEPMHVFASPELKITLPD--GKYYAAAKSTAAGAPFRAITVRDTIGDLPKVENGASKLI 230
Query: 692 IPYDREPETEFQCFIR 707
+ Y EP + FQ IR
Sbjct: 231 LEYGGEPTSWFQKKIR 246
>gi|301609669|ref|XP_002934384.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Xenopus (Silurana)
tropicalis]
Length = 1492
Score = 138 bits (348), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 109/193 (56%), Gaps = 4/193 (2%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP GDV+++CGGPPCQG SG NRF ++ + KN ++ ++ D+ +PK+ L+ENV
Sbjct: 1088 LPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSYLSYCDYYRPKYFLLENV 1145
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F + ++ + L L++M YQ G++ AG YG+ Q R R + A P EKLP +
Sbjct: 1146 RNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIVLAAAPGEKLPMFP 1205
Query: 637 LPTHDVVLRGVIPTEF--ERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPY 694
P H R + E+ V+ + L R + ++D +SDLP + N S EI Y
Sbjct: 1206 EPLHVFAPRACSLSVVVDEKKYVSNITRTNSSLFRTITVRDTMSDLPEIRNGASALEISY 1265
Query: 695 DREPETEFQCFIR 707
+ EP++ FQ IR
Sbjct: 1266 NGEPQSWFQRQIR 1278
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 5/70 (7%)
Query: 339 VKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAED 398
++ LD++SGCG +S G + AG++ T WA+++ E A Q+ +LN+P T V E
Sbjct: 1016 LRTLDVFSGCGGLSEGF----HQAGIS-ETNWAIEMWEPAAQAFRLNNPGTTVFTEDCNV 1070
Query: 399 FLTLLREWEK 408
L L+ EK
Sbjct: 1071 LLKLVMSGEK 1080
>gi|115470907|ref|NP_001059052.1| Os07g0182900 [Oryza sativa Japonica Group]
gi|113610588|dbj|BAF20966.1| Os07g0182900, partial [Oryza sativa Japonica Group]
Length = 445
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 108/194 (55%), Gaps = 7/194 (3%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP+PG+V+ I GGPPCQG SG NRF +P + + + ++ F+ ++ +P+F L+ENV
Sbjct: 99 LPVPGEVEFINGGPPCQGFSGMNRF--NQSPWSKVQCEMILAFLSFAEYFRPRFFLLENV 156
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F KG R +A L++M YQVR G++ AG +G+ Q R R F+W A P E LP +
Sbjct: 157 RNFVSFNKGQTFRLTVASLLEMGYQVRFGILEAGTFGVAQSRKRAFIWAAAPGETLPDWP 216
Query: 637 LPTHDVV---LRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIP 693
P H L+ +P + A R + ++D I DLP V+N S+ +
Sbjct: 217 EPMHVFASPELKINLPD--GKYYAAAKSTAGGAPFRAITVRDTIGDLPKVENGASKLLLE 274
Query: 694 YDREPETEFQCFIR 707
Y EP + FQ IR
Sbjct: 275 YGGEPISWFQKKIR 288
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 5/50 (10%)
Query: 342 LDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEV 391
LD+++GCG +S GL AG++ T+WA++ E A ++ NHPE V
Sbjct: 12 LDIFAGCGGLSEGL----QQAGVSF-TKWAIEYEEPAGEAFTKNHPEAAV 56
>gi|224031943|gb|ACN35047.1| unknown [Zea mays]
Length = 329
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/115 (59%), Positives = 81/115 (70%), Gaps = 1/115 (0%)
Query: 598 MNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNTV 657
M YQ R+GMM AG YGLPQFRMRVFLWGA + LP Y LPT+DVV+RG P F + V
Sbjct: 1 MKYQARLGMMVAGCYGLPQFRMRVFLWGALSSMVLPKYPLPTYDVVVRGGAPNAFSQCMV 60
Query: 658 AYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQCFIRL-RKD 711
AYDE Q+ L + LLL DA SDLP V+N++ D + Y P+TEFQ +IRL RKD
Sbjct: 61 AYDETQRPSLKKALLLGDAFSDLPKVENHQPNDVMEYGGSPKTEFQRYIRLGRKD 115
>gi|449462818|ref|XP_004149137.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1B-like [Cucumis
sativus]
Length = 1523
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 104/193 (53%), Gaps = 5/193 (2%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP PG V+ I GGPPCQG SG NRF + + + + ++ F+ ++ +PK+ L+ENV
Sbjct: 1172 LPRPGQVEFINGGPPCQGFSGMNRFNQ--STWSKVQCEMILAFLSFAEYFRPKYFLLENV 1229
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F KG R LA L++M YQV+ G++ AGAYG+ Q R R F+W A P E LP +
Sbjct: 1230 RNFVSFNKGQTFRLTLASLLEMGYQVKFGILEAGAYGISQSRKRAFIWAASPEEILPEWP 1289
Query: 637 LPTHDVVLRGVIPTEFERNT--VAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPY 694
P H V + NT A R + ++D I DLP+V N S + Y
Sbjct: 1290 EPMH-VFGSPELKISLSDNTRYAAVPSTAGGAPFRPITVRDTIGDLPAVGNGASVITMEY 1348
Query: 695 DREPETEFQCFIR 707
EP + FQ IR
Sbjct: 1349 KSEPASWFQKKIR 1361
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 53/115 (46%), Gaps = 19/115 (16%)
Query: 289 YYCDMMY--------LLPYSTFFSLPPENK------RVSSETSSTISSDVDANECEVGEP 334
++C+ +Y LP S S P E + R D NE + P
Sbjct: 1018 FFCEHLYDPEKGAIKKLPASVKLSSPSERQISDAAQRKKKGKCKEGEIIPDENENKKDLP 1077
Query: 335 QKMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPET 389
+ + LD+++GCG +S GL AG++ VT+WA++ E A ++ LNHPE
Sbjct: 1078 LENRLATLDIFAGCGGLSEGL----QQAGVS-VTKWAIEYEEPAGEAFSLNHPEA 1127
>gi|8132067|gb|AAF73200.1|AF152342_1 DNA-(cytosine-5)-methyltransferase [Xiphophorus maculatus x
Xiphophorus hellerii]
Length = 1503
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 107/193 (55%), Gaps = 4/193 (2%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP GDV+++CGGPPCQG SG NRF ++ + KN ++ ++ D+ +PKF L+ENV
Sbjct: 1097 LPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSYLSYCDYYRPKFFLLENV 1154
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F ++ + L L++M YQ G++ AG YG+ Q R R + A P EKLP Y
Sbjct: 1155 RNFVSFKNSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPRYP 1214
Query: 637 LPTHDVVLRGVIPTEF--ERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPY 694
P H R T E+ V+ + R + ++D +SDLP + N + EI Y
Sbjct: 1215 EPLHVFAPRACSLTVAVDEKKYVSNVTRGNGGIYRTITVRDTMSDLPEIRNGAASLEISY 1274
Query: 695 DREPETEFQCFIR 707
+ EP++ FQ IR
Sbjct: 1275 NGEPQSWFQRQIR 1287
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 52/94 (55%), Gaps = 12/94 (12%)
Query: 333 EPQKMDV---KLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPET 389
EPQ + V + LD++SGCG +S G + AG++ T WA+++ E A Q+ +LN+P T
Sbjct: 1016 EPQALKVPKYRTLDVFSGCGGLSEGF----HQAGIS-ETLWAIEMWEPAAQAFRLNNPGT 1070
Query: 390 EVRNESAEDFLTLLREWEKLCISFSLIARKDPQQ 423
V E L L+ EK + + +K PQ+
Sbjct: 1071 TVFTEDCNVLLKLVMSGEKT----NSLGQKLPQK 1100
>gi|110740122|dbj|BAF01962.1| DNA (cytosine-5)-methyltransferase [Arabidopsis thaliana]
Length = 603
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 103/192 (53%), Gaps = 3/192 (1%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LPLPG VD I GGPPCQG SG NRF + + + ++ F+ D+ +P++ L+ENV
Sbjct: 252 LPLPGQVDFINGGPPCQGFSGMNRFNQSS--WSKVQCEMILAFLSFADYFRPRYFLLENV 309
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
V F KG + LA L++M YQVR G++ AGAYG+ Q R R F+W A P E LP +
Sbjct: 310 RTFVSFNKGQTFQLTLASLLEMGYQVRFGILEAGAYGVSQSRKRAFIWAAAPEEVLPEWP 369
Query: 637 LPTHDV-VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYD 695
P H V + I + A R + ++D I DLPSV+N +SR Y
Sbjct: 370 EPMHVFGVPKLKISLSQGLHYAAVRSTALGAPFRPITVRDTIGDLPSVENGDSRTNKEYK 429
Query: 696 REPETEFQCFIR 707
+ FQ IR
Sbjct: 430 EVAVSWFQKEIR 441
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 96/204 (47%), Gaps = 30/204 (14%)
Query: 207 ICKIVEMF-----EAVDGTPYFTAQWYYRARDTVIESNAHLIDQRRVFFSEIQNDNPLEC 261
+C+++E+ +A G+ + +YR D E A+ D + ++FS+ P
Sbjct: 17 VCQLLEIVPKESRKADLGSFDVKVRRFYRPEDVSAE-KAYASDIQELYFSQDTVVLPPGA 75
Query: 262 LVKKLNIAR---VPLNIDLEAKKLAIPHCDYYCDMMYLLPYSTFFSLP----PENKRVSS 314
L K + + +PL +++ I ++CD+ + + LP P+ +
Sbjct: 76 LEGKCEVRKKSDMPL-----SREYPISDHIFFCDLFFDTSKGSLKQLPANMKPKFSTIKD 130
Query: 315 ET------SSTISSDVDANECEVGEPQK-MDVKLLDLYSGCGAMSTGLCLGANLAGLNLV 367
+T + S++++ + EP K + + LD+++GCG +S GL AG++
Sbjct: 131 DTLLRKKKGKGVESEIESEIVKPVEPPKEIRLATLDIFAGCGGLSHGL----KKAGVS-D 185
Query: 368 TRWAVDINEYACQSLKLNHPETEV 391
+WA++ E A Q+ K NHPE+ V
Sbjct: 186 AKWAIEYEEPAGQAFKQNHPESTV 209
>gi|297792161|ref|XP_002863965.1| hypothetical protein ARALYDRAFT_331330 [Arabidopsis lyrata subsp.
lyrata]
gi|297309800|gb|EFH40224.1| hypothetical protein ARALYDRAFT_331330 [Arabidopsis lyrata subsp.
lyrata]
Length = 1532
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/195 (39%), Positives = 106/195 (54%), Gaps = 9/195 (4%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LPLPG VD I GGPPCQG SG NRF + + + + ++ F+ D+ +P++ L+ENV
Sbjct: 1181 LPLPGQVDFINGGPPCQGFSGMNRFNQ--SSWSKVQCEMILAFLSFADYFRPRYFLLENV 1238
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
V F KG + LA L++M YQVR G++ AGAYG+ Q R R F+W A P E LP +
Sbjct: 1239 RTFVSFNKGQTFQLTLASLLEMGYQVRFGILEAGAYGVSQSRKRAFIWAAAPEEVLPEWP 1298
Query: 637 LPTHDVVLRGVIPTEFE-RNTVAYDEGQQAELA---RKLLLQDAISDLPSVDNYESRDEI 692
P H + GV + + Y + L R + ++D I DLPSV+N ES
Sbjct: 1299 EPMH---VFGVPKLKISLSQGLHYAAVRSTALGAPFRPITVRDTIGDLPSVENGESMTNK 1355
Query: 693 PYDREPETEFQCFIR 707
Y + FQ IR
Sbjct: 1356 EYKDVAVSWFQKEIR 1370
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 95/208 (45%), Gaps = 38/208 (18%)
Query: 207 ICKIVEMF-----EAVDGTPYFTAQWYYRARDTVIESNAHLIDQRRVFFSEIQNDNPLEC 261
+C+++E+ +A G+ + +YR D +E A+ D + +++S+ + P
Sbjct: 946 VCQLLEIVPKESRKADLGSFDVKVRRFYRPEDVSVE-KAYASDIQELYYSQDTDVLPPGA 1004
Query: 262 LVKKLNIAR---VPLNIDLEAKKLAIPHCDYYCDMMYLLPYSTFFSLPP----------- 307
L K + + +PL ++ I ++CD+ + + LP
Sbjct: 1005 LEGKCEVRKKSDMPL-----CREYPISDHIFFCDLFFDSSKGSLKQLPANMKLKFSTIKD 1059
Query: 308 ----ENKRVSSETSSTISSDVDANECEVGEPQKMDVKLLDLYSGCGAMSTGLCLGANLAG 363
K+ S T+S V +E P+++ + LD+++GCG +S GL AG
Sbjct: 1060 DTLLRKKKGKGVESETVSEIVKPDE----PPKEIRLATLDIFAGCGGLSQGL----KKAG 1111
Query: 364 LNLVTRWAVDINEYACQSLKLNHPETEV 391
++ T+WA++ E A Q+ K NHPE+ V
Sbjct: 1112 VS-DTKWAIEYEEPAGQAFKQNHPESTV 1138
>gi|148693196|gb|EDL25143.1| DNA methyltransferase (cytosine-5) 1, isoform CRA_e [Mus musculus]
Length = 1604
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 107/197 (54%), Gaps = 12/197 (6%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P+F L+ENV
Sbjct: 1198 LPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRPRFFLLENV 1255
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V + + ++ + L L++M YQ G++ AG YG+ Q R R + A P EKLP +
Sbjct: 1256 RNFVSYRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFP 1315
Query: 637 LPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRD 690
P H R V +F N G R + ++D +SDLP + N S
Sbjct: 1316 EPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEIQNGASNS 1371
Query: 691 EIPYDREPETEFQCFIR 707
EIPY+ EP + FQ +R
Sbjct: 1372 EIPYNGEPLSWFQRQLR 1388
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 12/108 (11%)
Query: 303 FSLPPENKRVSSETSSTISSDVDANECEVGEPQKMD-------VKLLDLYSGCGAMSTGL 355
F PP + R + +V EP++ + ++ LD++SGCG +S G
Sbjct: 1083 FEDPPNHARSPGNKGKGKGKGKGKGKHQVSEPKEPEAAIKLPKLRTLDVFSGCGGLSEGF 1142
Query: 356 CLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLL 403
+ AG++ T WA+++ + A Q+ +LN+P T V E L L+
Sbjct: 1143 ----HQAGIS-ETLWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLLKLV 1185
>gi|148693195|gb|EDL25142.1| DNA methyltransferase (cytosine-5) 1, isoform CRA_d [Mus musculus]
Length = 1619
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 107/197 (54%), Gaps = 12/197 (6%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P+F L+ENV
Sbjct: 1213 LPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRPRFFLLENV 1270
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V + + ++ + L L++M YQ G++ AG YG+ Q R R + A P EKLP +
Sbjct: 1271 RNFVSYRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFP 1330
Query: 637 LPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRD 690
P H R V +F N G R + ++D +SDLP + N S
Sbjct: 1331 EPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEIQNGASNS 1386
Query: 691 EIPYDREPETEFQCFIR 707
EIPY+ EP + FQ +R
Sbjct: 1387 EIPYNGEPLSWFQRQLR 1403
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 12/108 (11%)
Query: 303 FSLPPENKRVSSETSSTISSDVDANECEVGEPQKMD-------VKLLDLYSGCGAMSTGL 355
F PP + R + +V EP++ + ++ LD++SGCG +S G
Sbjct: 1098 FEDPPNHARSPGNKGKGKGKGKGKGKHQVSEPKEPEAAIKLPKLRTLDVFSGCGGLSEGF 1157
Query: 356 CLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLL 403
+ AG++ T WA+++ + A Q+ +LN+P T V E L L+
Sbjct: 1158 ----HQAGIS-ETLWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLLKLV 1200
>gi|74151181|dbj|BAE27713.1| unnamed protein product [Mus musculus]
Length = 1619
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 107/197 (54%), Gaps = 12/197 (6%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P+F L+ENV
Sbjct: 1213 LPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRPRFFLLENV 1270
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V + + ++ + L L++M YQ G++ AG YG+ Q R R + A P EKLP +
Sbjct: 1271 RNFVSYRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFP 1330
Query: 637 LPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRD 690
P H R V +F N G R + ++D +SDLP + N S
Sbjct: 1331 EPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEIQNGASNS 1386
Query: 691 EIPYDREPETEFQCFIR 707
EIPY+ EP + FQ +R
Sbjct: 1387 EIPYNGEPLSWFQRQLR 1403
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 12/108 (11%)
Query: 303 FSLPPENKRVSSETSSTISSDVDANECEVGEPQKMD-------VKLLDLYSGCGAMSTGL 355
F PP + R + +V EP++ + ++ LD++SGCG +S G
Sbjct: 1098 FEDPPNHARSPGNKGKGKGKGKGKGKHQVSEPKEPEAAIKLPKLRTLDVFSGCGGLSEGF 1157
Query: 356 CLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLL 403
+ AG++ T WA+++ + A Q+ +LN+P T V E L L+
Sbjct: 1158 ----HQAGIS-ETLWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLLKLV 1200
>gi|31419356|gb|AAH53047.1| Dnmt1 protein [Mus musculus]
Length = 1627
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 107/197 (54%), Gaps = 12/197 (6%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P+F L+ENV
Sbjct: 1221 LPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRPRFFLLENV 1278
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V + + ++ + L L++M YQ G++ AG YG+ Q R R + A P EKLP +
Sbjct: 1279 RNFVSYRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFP 1338
Query: 637 LPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRD 690
P H R V +F N G R + ++D +SDLP + N S
Sbjct: 1339 EPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEIQNGASNS 1394
Query: 691 EIPYDREPETEFQCFIR 707
EIPY+ EP + FQ +R
Sbjct: 1395 EIPYNGEPLSWFQRQLR 1411
Score = 45.4 bits (106), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 12/108 (11%)
Query: 303 FSLPPENKRVSSETSSTISSDVDANECEVGEPQKMD-------VKLLDLYSGCGAMSTGL 355
F PP + R + +V EP++ + ++ LD++SGCG +S G
Sbjct: 1106 FEDPPNHARSPGNKGKGKGKGKGKGKHQVSEPKEPEAAIKLPKLRTLDVFSGCGGLSEGF 1165
Query: 356 CLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLL 403
+ AG++ T WA+++ + A Q+ +LN+P T V E L L+
Sbjct: 1166 ----HQAGIS-ETLWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLLKLV 1208
>gi|148693197|gb|EDL25144.1| DNA methyltransferase (cytosine-5) 1, isoform CRA_f [Mus musculus]
Length = 1638
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 107/197 (54%), Gaps = 12/197 (6%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P+F L+ENV
Sbjct: 1232 LPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRPRFFLLENV 1289
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V + + ++ + L L++M YQ G++ AG YG+ Q R R + A P EKLP +
Sbjct: 1290 RNFVSYRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFP 1349
Query: 637 LPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRD 690
P H R V +F N G R + ++D +SDLP + N S
Sbjct: 1350 EPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEIQNGASNS 1405
Query: 691 EIPYDREPETEFQCFIR 707
EIPY+ EP + FQ +R
Sbjct: 1406 EIPYNGEPLSWFQRQLR 1422
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 12/108 (11%)
Query: 303 FSLPPENKRVSSETSSTISSDVDANECEVGEPQKMD-------VKLLDLYSGCGAMSTGL 355
F PP + R + +V EP++ + ++ LD++SGCG +S G
Sbjct: 1117 FEDPPNHARSPGNKGKGKGKGKGKGKHQVSEPKEPEAAIKLPKLRTLDVFSGCGGLSEGF 1176
Query: 356 CLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLL 403
+ AG++ T WA+++ + A Q+ +LN+P T V E L L+
Sbjct: 1177 ----HQAGIS-ETLWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLLKLV 1219
>gi|148693194|gb|EDL25141.1| DNA methyltransferase (cytosine-5) 1, isoform CRA_c [Mus musculus]
Length = 1683
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 107/197 (54%), Gaps = 12/197 (6%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P+F L+ENV
Sbjct: 1277 LPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRPRFFLLENV 1334
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V + + ++ + L L++M YQ G++ AG YG+ Q R R + A P EKLP +
Sbjct: 1335 RNFVSYRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFP 1394
Query: 637 LPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRD 690
P H R V +F N G R + ++D +SDLP + N S
Sbjct: 1395 EPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEIQNGASNS 1450
Query: 691 EIPYDREPETEFQCFIR 707
EIPY+ EP + FQ +R
Sbjct: 1451 EIPYNGEPLSWFQRQLR 1467
Score = 45.4 bits (106), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 12/108 (11%)
Query: 303 FSLPPENKRVSSETSSTISSDVDANECEVGEPQKMD-------VKLLDLYSGCGAMSTGL 355
F PP + R + +V EP++ + ++ LD++SGCG +S G
Sbjct: 1162 FEDPPNHARSPGNKGKGKGKGKGKGKHQVSEPKEPEAAIKLPKLRTLDVFSGCGGLSEGF 1221
Query: 356 CLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLL 403
+ AG++ T WA+++ + A Q+ +LN+P T V E L L+
Sbjct: 1222 ----HQAGIS-ETLWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLLKLV 1264
>gi|148693193|gb|EDL25140.1| DNA methyltransferase (cytosine-5) 1, isoform CRA_b [Mus musculus]
Length = 1645
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 107/197 (54%), Gaps = 12/197 (6%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P+F L+ENV
Sbjct: 1239 LPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRPRFFLLENV 1296
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V + + ++ + L L++M YQ G++ AG YG+ Q R R + A P EKLP +
Sbjct: 1297 RNFVSYRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFP 1356
Query: 637 LPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRD 690
P H R V +F N G R + ++D +SDLP + N S
Sbjct: 1357 EPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEIQNGASNS 1412
Query: 691 EIPYDREPETEFQCFIR 707
EIPY+ EP + FQ +R
Sbjct: 1413 EIPYNGEPLSWFQRQLR 1429
Score = 45.4 bits (106), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 12/108 (11%)
Query: 303 FSLPPENKRVSSETSSTISSDVDANECEVGEPQKMD-------VKLLDLYSGCGAMSTGL 355
F PP + R + +V EP++ + ++ LD++SGCG +S G
Sbjct: 1124 FEDPPNHARSPGNKGKGKGKGKGKGKHQVSEPKEPEAAIKLPKLRTLDVFSGCGGLSEGF 1183
Query: 356 CLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLL 403
+ AG++ T WA+++ + A Q+ +LN+P T V E L L+
Sbjct: 1184 ----HQAGIS-ETLWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLLKLV 1226
>gi|1765919|emb|CAA32910.1| DNA methyltransferase 1 [Mus musculus]
Length = 1620
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 107/197 (54%), Gaps = 12/197 (6%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P+F L+ENV
Sbjct: 1214 LPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRPRFFLLENV 1271
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V + + ++ + L L++M YQ G++ AG YG+ Q R R + A P EKLP +
Sbjct: 1272 RNFVSYRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFP 1331
Query: 637 LPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRD 690
P H R V +F N G R + ++D +SDLP + N S
Sbjct: 1332 EPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEIQNGASNS 1387
Query: 691 EIPYDREPETEFQCFIR 707
EIPY+ EP + FQ +R
Sbjct: 1388 EIPYNGEPLSWFQRQLR 1404
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 12/108 (11%)
Query: 303 FSLPPENKRVSSETSSTISSDVDANECEVGEPQKMD-------VKLLDLYSGCGAMSTGL 355
F PP + R + +V EP++ + ++ LD++SGCG +S G
Sbjct: 1099 FEDPPNHARSPGNKGKGKGKGKGKGKHQVSEPKEPEAAIKLPKLRTLDVFSGCGGLSEGF 1158
Query: 356 CLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLL 403
+ AG++ T WA+++ + A Q+ +LN+P T V E L L+
Sbjct: 1159 ----HQAGIS-ETLWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLLKLV 1201
>gi|432869168|ref|XP_004071656.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Oryzias
latipes]
Length = 1466
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 108/193 (55%), Gaps = 4/193 (2%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP GDV+++CGGPPCQG SG NRF ++ + KN ++ ++ D+ +PKF L+ENV
Sbjct: 1060 LPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSYLRYXDYYRPKFFLLENV 1117
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F ++ + L L++M YQ G++ AG YG+ Q R R + A P EKLP Y
Sbjct: 1118 RNFVSFKNSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPRYP 1177
Query: 637 LPTHDVVLRGVIPTEF--ERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPY 694
P H R + E+ V+ + R + ++D++SDLP + N S EI Y
Sbjct: 1178 EPLHVFAPRACSLSVVVDEKRYVSNVTRGNGGIYRTITVRDSMSDLPEIRNGASALEISY 1237
Query: 695 DREPETEFQCFIR 707
+ EP++ FQ IR
Sbjct: 1238 NGEPQSWFQRQIR 1250
Score = 45.8 bits (107), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 334 PQKMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRN 393
P+ + LD++SGCG +S G + AG++ + WA+++ E A Q+ +LN+P T V
Sbjct: 983 PKVPKYRTLDVFSGCGGLSEGF----HQAGIS-ESLWAIEMWEPAAQAFRLNNPGTTVFT 1037
Query: 394 ESAEDFLTLLREWEKLCISFSLIARKDPQQ 423
E L L+ EK + + +K PQ+
Sbjct: 1038 EDCNVLLKLVMSGEKT----NSLGQKLPQK 1063
>gi|327180734|ref|NP_034196.5| DNA (cytosine-5)-methyltransferase 1 isoform 2 [Mus musculus]
Length = 1619
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 107/197 (54%), Gaps = 12/197 (6%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P+F L+ENV
Sbjct: 1213 LPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRPRFFLLENV 1270
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V + + ++ + L L++M YQ G++ AG YG+ Q R R + A P EKLP +
Sbjct: 1271 RNFVSYRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFP 1330
Query: 637 LPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRD 690
P H R V +F N G R + ++D +SDLP + N S
Sbjct: 1331 EPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEIQNGASNS 1386
Query: 691 EIPYDREPETEFQCFIR 707
EIPY+ EP + FQ +R
Sbjct: 1387 EIPYNGEPLSWFQRQLR 1403
Score = 45.4 bits (106), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 12/108 (11%)
Query: 303 FSLPPENKRVSSETSSTISSDVDANECEVGEPQKMD-------VKLLDLYSGCGAMSTGL 355
F PP + R + +V EP++ + ++ LD++SGCG +S G
Sbjct: 1098 FEDPPNHARSPGNKGKGKGKGKGKGKHQVSEPKEPEAAIKLPKLRTLDVFSGCGGLSEGF 1157
Query: 356 CLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLL 403
+ AG++ T WA+++ + A Q+ +LN+P T V E L L+
Sbjct: 1158 ----HQAGIS-ETLWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLLKLV 1200
>gi|327180732|ref|NP_001186360.2| DNA (cytosine-5)-methyltransferase 1 isoform 1 [Mus musculus]
gi|20141336|sp|P13864.5|DNMT1_MOUSE RecName: Full=DNA (cytosine-5)-methyltransferase 1; Short=Dnmt1;
Short=Met-1; AltName: Full=DNA methyltransferase MmuI;
Short=DNA MTase MmuI; Short=M.MmuI; AltName: Full=MCMT
gi|6625687|gb|AAF19352.1| DNA methyltransferase [Mus musculus]
gi|37574019|gb|AAH48148.2| DNA methyltransferase (cytosine-5) 1 [Mus musculus]
Length = 1620
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 107/197 (54%), Gaps = 12/197 (6%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P+F L+ENV
Sbjct: 1214 LPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRPRFFLLENV 1271
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V + + ++ + L L++M YQ G++ AG YG+ Q R R + A P EKLP +
Sbjct: 1272 RNFVSYRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFP 1331
Query: 637 LPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRD 690
P H R V +F N G R + ++D +SDLP + N S
Sbjct: 1332 EPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEIQNGASNS 1387
Query: 691 EIPYDREPETEFQCFIR 707
EIPY+ EP + FQ +R
Sbjct: 1388 EIPYNGEPLSWFQRQLR 1404
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 12/108 (11%)
Query: 303 FSLPPENKRVSSETSSTISSDVDANECEVGEPQKMD-------VKLLDLYSGCGAMSTGL 355
F PP + R + +V EP++ + ++ LD++SGCG +S G
Sbjct: 1099 FEDPPNHARSPGNKGKGKGKGKGKGKHQVSEPKEPEAAIKLPKLRTLDVFSGCGGLSEGF 1158
Query: 356 CLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLL 403
+ AG++ T WA+++ + A Q+ +LN+P T V E L L+
Sbjct: 1159 ----HQAGIS-ETLWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLLKLV 1201
>gi|313661499|ref|NP_001186362.1| DNA (cytosine-5)-methyltransferase 1 isoform 4 [Mus musculus]
gi|7339827|gb|AAF60965.1| DNA methyltransferase [Mus musculus]
gi|9719249|gb|AAF97695.1| DNA (cytosine-5)-methyltransferase [Mus musculus]
gi|148693192|gb|EDL25139.1| DNA methyltransferase (cytosine-5) 1, isoform CRA_a [Mus musculus]
gi|148693198|gb|EDL25145.1| DNA methyltransferase (cytosine-5) 1, isoform CRA_a [Mus musculus]
Length = 1502
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 107/197 (54%), Gaps = 12/197 (6%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P+F L+ENV
Sbjct: 1096 LPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRPRFFLLENV 1153
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V + + ++ + L L++M YQ G++ AG YG+ Q R R + A P EKLP +
Sbjct: 1154 RNFVSYRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFP 1213
Query: 637 LPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRD 690
P H R V +F N G R + ++D +SDLP + N S
Sbjct: 1214 EPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEIQNGASNS 1269
Query: 691 EIPYDREPETEFQCFIR 707
EIPY+ EP + FQ +R
Sbjct: 1270 EIPYNGEPLSWFQRQLR 1286
Score = 45.8 bits (107), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 12/108 (11%)
Query: 303 FSLPPENKRVSSETSSTISSDVDANECEVGEPQKMD-------VKLLDLYSGCGAMSTGL 355
F PP + R + +V EP++ + ++ LD++SGCG +S G
Sbjct: 981 FEDPPNHARSPGNKGKGKGKGKGKGKHQVSEPKEPEAAIKLPKLRTLDVFSGCGGLSEGF 1040
Query: 356 CLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLL 403
+ AG++ T WA+++ + A Q+ +LN+P T V E L L+
Sbjct: 1041 ----HQAGIS-ETLWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLLKLV 1083
>gi|449494652|ref|XP_004159609.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1B-like [Cucumis
sativus]
Length = 544
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 104/193 (53%), Gaps = 5/193 (2%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP PG V+ I GGPPCQG SG NRF + + + + ++ F+ ++ +PK+ L+ENV
Sbjct: 193 LPRPGQVEFINGGPPCQGFSGMNRF--NQSTWSKVQCEMILAFLSFAEYFRPKYFLLENV 250
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F KG R LA L++M YQV+ G++ AGAYG+ Q R R F+W A P E LP +
Sbjct: 251 RNFVSFNKGQTFRLTLASLLEMGYQVKFGILEAGAYGISQSRKRAFIWAASPEEILPEWP 310
Query: 637 LPTHDVVLRGVIPTEFERNT--VAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPY 694
P H V + NT A R + ++D I DLP+V N S + Y
Sbjct: 311 EPMH-VFGSPELKISLSDNTRYAAVPSTAGGAPFRPITVRDTIGDLPAVGNGASVITMEY 369
Query: 695 DREPETEFQCFIR 707
EP + FQ IR
Sbjct: 370 KSEPASWFQKKIR 382
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 54/101 (53%), Gaps = 7/101 (6%)
Query: 289 YYCDMMYLLPYSTFFSLPPENKRVSSETSSTISSDVDANECEVGEPQKMDVKLLDLYSGC 348
++C+ +Y P P + ++SS + IS D + + P + + LD+++GC
Sbjct: 55 FFCEHLYD-PEKGAIKKLPASVKLSSPSERQIS-DAAQRKKKENLPLENRLATLDIFAGC 112
Query: 349 GAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPET 389
G +S GL AG++ VT+WA++ E A ++ LNHPE
Sbjct: 113 GGLSEGL----QQAGVS-VTKWAIEYEEPAGEAFSLNHPEA 148
>gi|313661497|ref|NP_001186361.1| DNA (cytosine-5)-methyltransferase 1 isoform 3 [Mus musculus]
Length = 1501
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 107/197 (54%), Gaps = 12/197 (6%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P+F L+ENV
Sbjct: 1095 LPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRPRFFLLENV 1152
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V + + ++ + L L++M YQ G++ AG YG+ Q R R + A P EKLP +
Sbjct: 1153 RNFVSYRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFP 1212
Query: 637 LPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRD 690
P H R V +F N G R + ++D +SDLP + N S
Sbjct: 1213 EPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEIQNGASNS 1268
Query: 691 EIPYDREPETEFQCFIR 707
EIPY+ EP + FQ +R
Sbjct: 1269 EIPYNGEPLSWFQRQLR 1285
Score = 45.8 bits (107), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 12/108 (11%)
Query: 303 FSLPPENKRVSSETSSTISSDVDANECEVGEPQKMD-------VKLLDLYSGCGAMSTGL 355
F PP + R + +V EP++ + ++ LD++SGCG +S G
Sbjct: 980 FEDPPNHARSPGNKGKGKGKGKGKGKHQVSEPKEPEAAIKLPKLRTLDVFSGCGGLSEGF 1039
Query: 356 CLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLL 403
+ AG++ T WA+++ + A Q+ +LN+P T V E L L+
Sbjct: 1040 ----HQAGIS-ETLWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLLKLV 1082
>gi|2689716|gb|AAC40061.1| DNA (cytosine-5)-methyltransferase [Mus musculus]
Length = 1502
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 107/197 (54%), Gaps = 12/197 (6%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P+F L+ENV
Sbjct: 1096 LPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRPRFFLLENV 1153
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V + + ++ + L L++M YQ G++ AG YG+ Q R R + A P EKLP +
Sbjct: 1154 RNFVSYRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFP 1213
Query: 637 LPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRD 690
P H R V +F N G R + ++D +SDLP + N S
Sbjct: 1214 EPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEIQNGASNS 1269
Query: 691 EIPYDREPETEFQCFIR 707
EIPY+ EP + FQ +R
Sbjct: 1270 EIPYNGEPLSWFQRQLR 1286
Score = 45.8 bits (107), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 12/108 (11%)
Query: 303 FSLPPENKRVSSETSSTISSDVDANECEVGEPQKMD-------VKLLDLYSGCGAMSTGL 355
F PP + R + +V EP++ + ++ LD++SGCG +S G
Sbjct: 981 FEDPPNHARSPGNKGKGKGKGKGKGKHQVSEPKEPEAAIKLPKLRTLDVFSGCGGLSEGF 1040
Query: 356 CLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLL 403
+ AG++ T WA+++ + A Q+ +LN+P T V E L L+
Sbjct: 1041 ----HQAGIS-ETLWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLLKLV 1083
>gi|40538748|ref|NP_571264.1| DNA (cytosine-5)-methyltransferase 1 [Danio rerio]
gi|19263095|gb|AAL86596.1|AF483203_1 DNA (cytosine-5)-methyltransferase [Danio rerio]
Length = 1499
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 108/193 (55%), Gaps = 4/193 (2%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP GDV+++CGGPPCQG SG NRF ++ + KN ++ ++ D+ +PKF L+ENV
Sbjct: 1094 LPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSYLSYCDYYRPKFFLLENV 1151
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F + ++ + L L++M YQ G++ AG YG+ Q R R + A P EKLP Y
Sbjct: 1152 RNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPRYP 1211
Query: 637 LPTHDVVLRGVIPTEF--ERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPY 694
P H R + E+ V+ + R + ++D +SDLP + N + EI Y
Sbjct: 1212 EPLHVFAPRACSLSVAVDEKKYVSNVTRGNGGIYRTITVRDTMSDLPEIRNGAAALEISY 1271
Query: 695 DREPETEFQCFIR 707
+ EP++ FQ IR
Sbjct: 1272 NGEPQSWFQRQIR 1284
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 9/91 (9%)
Query: 333 EPQKMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVR 392
EP ++ LD++SGCG +S G + AG++ T WA+++ + A Q+ +LN+P T V
Sbjct: 1016 EPVVPKLRTLDVFSGCGGLSEGF----HQAGIS-ETHWAIEMWDPAAQAFRLNNPGTTVF 1070
Query: 393 NESAEDFLTLLREWEKLCISFSLIARKDPQQ 423
E L L+ EK + + +K PQ+
Sbjct: 1071 TEDCNVLLKLVMSGEKT----NSLGQKLPQK 1097
>gi|60544836|gb|AAX22756.1| DMT1 [Arabidopsis thaliana]
Length = 1431
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 101/177 (57%), Gaps = 9/177 (5%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LPLPG VD I GGPPCQG SG NRF + + + + ++ F+ D+ +P++ L+ENV
Sbjct: 1151 LPLPGQVDFINGGPPCQGFSGMNRFNQ--SSWSKVQCEMILAFLSFADYFRPRYFLLENV 1208
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
V F KG + LA L++M YQVR G++ AGAYG+ Q R R F+W A P E LP +
Sbjct: 1209 RTFVSFNKGQTFQLTLASLLEMGYQVRFGILEAGAYGVSQSRKRAFIWAAAPEEVLPEWP 1268
Query: 637 LPTHDVVLRGVIPTEFE-RNTVAYDEGQQAELA---RKLLLQDAISDLPSVDNYESR 689
P H + GV + + Y + L R + ++D I DLPSV+N +SR
Sbjct: 1269 EPMH---VFGVPKLKISLSQGLHYAAVRSTALGAPFRPITVRDTIGDLPSVENGDSR 1322
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 96/204 (47%), Gaps = 30/204 (14%)
Query: 207 ICKIVEMF-----EAVDGTPYFTAQWYYRARDTVIESNAHLIDQRRVFFSEIQNDNPLEC 261
+C+++E+ +A G+ + +YR D E A+ D + ++FS+ P
Sbjct: 916 VCQLLEIVPKESRKADLGSFDVKVRRFYRPEDVSAE-KAYASDIQELYFSQDTVVLPPGA 974
Query: 262 LVKKLNIAR---VPLNIDLEAKKLAIPHCDYYCDMMYLLPYSTFFSLP----PENKRVSS 314
L K + + +PL +++ I ++CD+ + + LP P+ +
Sbjct: 975 LEGKCEVRKKSDMPL-----SREYPISDHIFFCDLFFDTSKGSLKQLPANMKPKFSTIKD 1029
Query: 315 ET------SSTISSDVDANECEVGEPQK-MDVKLLDLYSGCGAMSTGLCLGANLAGLNLV 367
+T + S++++ + EP K + + LD+++GCG +S GL AG++
Sbjct: 1030 DTLLRKKKGKGVESEIESEIVKPVEPPKEIRLATLDIFAGCGGLSHGL----KKAGVS-D 1084
Query: 368 TRWAVDINEYACQSLKLNHPETEV 391
+WA++ E A Q+ K NHPE+ V
Sbjct: 1085 AKWAIEYEEPAGQAFKQNHPESTV 1108
>gi|190338613|gb|AAI63894.1| Dnmt1 protein [Danio rerio]
Length = 1500
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 108/193 (55%), Gaps = 4/193 (2%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP GDV+++CGGPPCQG SG NRF ++ + KN ++ ++ D+ +PKF L+ENV
Sbjct: 1095 LPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSYLSYCDYYRPKFFLLENV 1152
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F + ++ + L L++M YQ G++ AG YG+ Q R R + A P EKLP Y
Sbjct: 1153 RNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPRYP 1212
Query: 637 LPTHDVVLRGVIPTEF--ERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPY 694
P H R + E+ V+ + R + ++D +SDLP + N + EI Y
Sbjct: 1213 EPLHVFAPRACSLSVAVDEKKYVSNVTRGNGGIYRTITVRDTMSDLPEIRNGAAALEISY 1272
Query: 695 DREPETEFQCFIR 707
+ EP++ FQ IR
Sbjct: 1273 NGEPQSWFQRQIR 1285
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 330 EVGEPQKMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPET 389
E EP ++ LD++SGCG +S G + AG++ T WA+++ + A Q+ +LN+P T
Sbjct: 1014 EAQEPAVPKLRTLDVFSGCGGLSEGF----HQAGIS-ETHWAIEMWDPAAQAFRLNNPGT 1068
Query: 390 EVRNESAEDFLTLLREWEKLCISFSLIARKDPQQ 423
V E L L+ EK + + +K PQ+
Sbjct: 1069 TVFTEDCNVLLKLVMSGEKT----NSLGQKLPQK 1098
>gi|348509192|ref|XP_003442135.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Oreochromis
niloticus]
Length = 1505
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 107/193 (55%), Gaps = 4/193 (2%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP GDV+++CGGPPCQG SG NRF ++ + KN ++ ++ D+ +PKF L+ENV
Sbjct: 1099 LPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSYLSYCDYYRPKFFLLENV 1156
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F ++ + L L++M YQ G++ AG YG+ Q R R + A P EKLP Y
Sbjct: 1157 RNFVSFKNSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPRYP 1216
Query: 637 LPTHDVVLRGVIPTEF--ERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPY 694
P H R + E+ V+ + R + ++D +SDLP + N + EI Y
Sbjct: 1217 EPLHVFAPRACSLSVVVGEKRYVSNVTRGNGGIYRTITVRDTMSDLPEIRNGAAALEISY 1276
Query: 695 DREPETEFQCFIR 707
+ EP++ FQ IR
Sbjct: 1277 NGEPQSWFQRQIR 1289
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 9/91 (9%)
Query: 333 EPQKMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVR 392
+P+ + LD++SGCG +S G + AG++ T WA+++ E A Q+ +LN+P T V
Sbjct: 1021 KPKVPKYRTLDVFSGCGGLSEGF----HQAGIS-ETLWAIEMWEPAAQAFRLNNPGTTVF 1075
Query: 393 NESAEDFLTLLREWEKLCISFSLIARKDPQQ 423
E L L+ EK + + +K PQ+
Sbjct: 1076 TEDCNVLLKLVMSGEKT----NSLGQKLPQK 1102
>gi|332138119|pdb|3AV4|A Chain A, Crystal Structure Of Mouse Dna Methyltransferase 1
gi|332138120|pdb|3AV5|A Chain A, Crystal Structure Of Mouse Dna Methyltransferase 1 With
Adohcy
gi|332138121|pdb|3AV6|A Chain A, Crystal Structure Of Mouse Dna Methyltransferase 1 With
Adomet
Length = 1330
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 107/197 (54%), Gaps = 12/197 (6%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P+F L+ENV
Sbjct: 924 LPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRPRFFLLENV 981
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V + + ++ + L L++M YQ G++ AG YG+ Q R R + A P EKLP +
Sbjct: 982 RNFVSYRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFP 1041
Query: 637 LPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRD 690
P H R V +F N G R + ++D +SDLP + N S
Sbjct: 1042 EPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEIQNGASNS 1097
Query: 691 EIPYDREPETEFQCFIR 707
EIPY+ EP + FQ +R
Sbjct: 1098 EIPYNGEPLSWFQRQLR 1114
Score = 45.4 bits (106), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 12/112 (10%)
Query: 303 FSLPPENKRVSSETSSTISSDVDANECEVGEPQKMD-------VKLLDLYSGCGAMSTGL 355
F PP + R + +V EP++ + ++ LD++SGCG +S G
Sbjct: 809 FEDPPNHARSPGNKGKGKGKGKGKGKHQVSEPKEPEAAIKLPKLRTLDVFSGCGGLSEGF 868
Query: 356 CLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWE 407
+ AG++ T WA+++ + A Q+ +LN+P T V E L L+ E
Sbjct: 869 ----HQAGIS-ETLWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLLKLVMAGE 915
>gi|190337769|gb|AAI63893.1| Dnmt1 protein [Danio rerio]
Length = 1500
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 108/193 (55%), Gaps = 4/193 (2%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP GDV+++CGGPPCQG SG NRF ++ + KN ++ ++ D+ +PKF L+ENV
Sbjct: 1095 LPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSYLSYCDYYRPKFFLLENV 1152
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F + ++ + L L++M YQ G++ AG YG+ Q R R + A P EKLP Y
Sbjct: 1153 RNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPRYP 1212
Query: 637 LPTHDVVLRGVIPTEF--ERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPY 694
P H R + E+ V+ + R + ++D +SDLP + N + EI Y
Sbjct: 1213 EPLHVFAPRACSLSVAVDEKKYVSNVTRGNGGIYRTITVRDTMSDLPEIRNGAAALEISY 1272
Query: 695 DREPETEFQCFIR 707
+ EP++ FQ IR
Sbjct: 1273 NGEPQSWFQRQIR 1285
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 330 EVGEPQKMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPET 389
E EP ++ LD++SGCG +S G + AG++ T WA+++ + A Q+ +LN+P T
Sbjct: 1014 EAQEPAVPKLRTLDVFSGCGGLSEGF----HQAGIS-ETHWAIEMWDPAAQAFRLNNPGT 1068
Query: 390 EVRNESAEDFLTLLREWEKLCISFSLIARKDPQQ 423
V E L L+ EK + + +K PQ+
Sbjct: 1069 TVFTEDCNVLLKLVMSGEKT----NSLGQKLPQK 1098
>gi|340719551|ref|XP_003398214.1| PREDICTED: DNA (cytosine-5)-methyltransferase PliMCI-like [Bombus
terrestris]
Length = 1442
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 108/193 (55%), Gaps = 4/193 (2%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP G+V+++CGGPPCQG SG NRF ++ L KN ++ + D+ +PKF +MENV
Sbjct: 1041 LPQKGEVELLCGGPPCQGFSGMNRFNSRQYSLF--KNSLVVSCLSYCDYYRPKFFIMENV 1098
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F + ++ + L L++M YQ G++ AG YG+PQ R R+ + A P E LP Y
Sbjct: 1099 RNFVSFKRSMVLKLTLRCLLRMGYQCTFGILQAGNYGIPQTRRRLIILAAAPGEVLPKYP 1158
Query: 637 LPTHDVVLRGVIPTEFERNTVAYDEGQQAELA--RKLLLQDAISDLPSVDNYESRDEIPY 694
PTH R + N E A R + ++DA+SDLP++ N + +E+ Y
Sbjct: 1159 EPTHVFSKRACQLSVIVDNKKYSSNCDWIESAPYRTISVRDAMSDLPNIRNGWNTEEMAY 1218
Query: 695 DREPETEFQCFIR 707
EP + FQ +R
Sbjct: 1219 SDEPISHFQRKVR 1231
Score = 40.0 bits (92), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 10/74 (13%)
Query: 339 VKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAED 398
+K LD+++GCG +S GL AG+ + +WA++ +E A + +LN+P T V ED
Sbjct: 969 LKTLDVFAGCGGLSEGL----RQAGI-VDNQWAIERDEPAACAYRLNNPNTTV---FCED 1020
Query: 399 FLTLLREWEK--LC 410
LLR+ K LC
Sbjct: 1021 CNVLLRKVMKGDLC 1034
>gi|354475153|ref|XP_003499794.1| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase
1-like [Cricetulus griseus]
Length = 1621
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 106/197 (53%), Gaps = 12/197 (6%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P+F L+ENV
Sbjct: 1216 LPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSTFKNSLVVSFLSYCDYYRPRFFLLENV 1273
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F + ++ + L L++M YQ G++ AG YG+ Q R R + A P EKLP +
Sbjct: 1274 RNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFP 1333
Query: 637 LPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRD 690
P H R V +F N G R + ++D +SDLP + N S
Sbjct: 1334 EPLHVFAPRACQLSVVVDDKKFVSNITRLTSGPY----RTITVRDTMSDLPEIQNGASAP 1389
Query: 691 EIPYDREPETEFQCFIR 707
EI Y EP++ FQ +R
Sbjct: 1390 EISYSGEPQSWFQRQLR 1406
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 12/108 (11%)
Query: 303 FSLPPENKRVSSETSSTISSDVDANECEVGEPQKMD-------VKLLDLYSGCGAMSTGL 355
F PP + R +C+V EP++ + ++ LD++SGCG +S G
Sbjct: 1101 FEDPPNHARNPLNKGKGKGKGKGNAKCQVSEPKEPETAIKLPKLRTLDVFSGCGGLSEGF 1160
Query: 356 CLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLL 403
+ AG++ T WA+++ + A Q+ +LN+P + V E L L+
Sbjct: 1161 ----HQAGIS-ETLWAIEMWDPAAQAFRLNNPSSTVFTEDCNVLLKLV 1203
>gi|15236318|ref|NP_193097.1| DNA (cytosine-5-)-methyltransferase [Arabidopsis thaliana]
gi|4678387|emb|CAB41119.1| DNA (cytosine-5-)-methyltransferase-like protein [Arabidopsis
thaliana]
gi|7268065|emb|CAB78403.1| DNA (cytosine-5-)-methyltransferase-like protein [Arabidopsis
thaliana]
gi|332657902|gb|AEE83302.1| DNA (cytosine-5-)-methyltransferase [Arabidopsis thaliana]
Length = 1404
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 97/174 (55%), Gaps = 3/174 (1%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LPLPG VD I GGPPCQG S NRF D + + + ++ F+ D+ +PK+ L+ENV
Sbjct: 1070 LPLPGQVDFISGGPPCQGFSRLNRF--SDGSWSKNQCQMILAFLSFADYFRPKYFLLENV 1127
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
V F +G +A L++M YQVR G++ AGAYG+ Q R R F+W A P E LP +
Sbjct: 1128 KTFVSFNEGHTFHLTVASLLEMGYQVRFGLLEAGAYGISQPRKRAFIWAAAPNEVLPEWP 1187
Query: 637 LPTHDVVLRGV-IPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESR 689
P H G IP + A + R + ++DAI DLP +++ ES+
Sbjct: 1188 EPMHVFNNPGFKIPLSQGLHYAAVQSTKFGAPFRSITVRDAIGDLPPIESGESK 1241
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 91/204 (44%), Gaps = 27/204 (13%)
Query: 228 YYRARDTVIESNAHLIDQRRVFFSEIQNDNPLECLVKKLNIAR---VPLNIDLEAKKLAI 284
+YR D E A+ D + V++SE P E + K + + +PL ++ I
Sbjct: 854 FYRPDDVSAEE-AYASDIQEVYYSEDTYILPPEAIKGKCEVMKKTDMPL-----CREYPI 907
Query: 285 PHCDYYCDMMY--------LLPYSTFFSLPP-ENKRVSSETSSTISSDVDANECEVGEPQ 335
Y+CD Y LPY+ ++ + E + S + EV P+
Sbjct: 908 LDHVYFCDRFYDSSNGCLKKLPYNMMLKFSTIKDDTLLREKKTETGSAMLLKPDEV--PK 965
Query: 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNES 395
+ LD+++GCG +S GL AG++ T+WA++ E A Q+ K NHP+T V ++
Sbjct: 966 GKRLATLDIFAGCGGLSYGL----EKAGVS-DTKWAIEYEEPAAQAFKQNHPKTTVFVDN 1020
Query: 396 AEDFLTLLREWEKLCISFSLIARK 419
L + W +L I+ I K
Sbjct: 1021 CNVILRI--SWLRLLINDRAIMEK 1042
>gi|344240107|gb|EGV96210.1| DNA (cytosine-5)-methyltransferase 1 [Cricetulus griseus]
Length = 1494
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 106/197 (53%), Gaps = 12/197 (6%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P+F L+ENV
Sbjct: 1207 LPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSTFKNSLVVSFLSYCDYYRPRFFLLENV 1264
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F + ++ + L L++M YQ G++ AG YG+ Q R R + A P EKLP +
Sbjct: 1265 RNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFP 1324
Query: 637 LPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRD 690
P H R V +F N G R + ++D +SDLP + N S
Sbjct: 1325 EPLHVFAPRACQLSVVVDDKKFVSNITRLTSGPY----RTITVRDTMSDLPEIQNGASAP 1380
Query: 691 EIPYDREPETEFQCFIR 707
EI Y EP++ FQ +R
Sbjct: 1381 EISYSGEPQSWFQRQLR 1397
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 12/108 (11%)
Query: 303 FSLPPENKRVSSETSSTISSDVDANECEVGEPQKMD-------VKLLDLYSGCGAMSTGL 355
F PP + R +C+V EP++ + ++ LD++SGCG +S G
Sbjct: 1092 FEDPPNHARNPLNKGKGKGKGKGNAKCQVSEPKEPETAIKLPKLRTLDVFSGCGGLSEGF 1151
Query: 356 CLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLL 403
+ AG++ T WA+++ + A Q+ +LN+P + V E L L+
Sbjct: 1152 ----HQAGIS-ETLWAIEMWDPAAQAFRLNNPSSTVFTEDCNVLLKLV 1194
>gi|15236676|ref|NP_192638.1| DNA (cytosine-5-)-methyltransferase [Arabidopsis thaliana]
gi|7267541|emb|CAB78023.1| Met2-type cytosine DNA-methyltransferase-like protein [Arabidopsis
thaliana]
gi|332657308|gb|AEE82708.1| DNA (cytosine-5-)-methyltransferase [Arabidopsis thaliana]
Length = 1512
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 104/194 (53%), Gaps = 7/194 (3%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LPLPG D I GGPPCQG SG NRF D + + + ++ F+ D+ +PK+ L+ENV
Sbjct: 1161 LPLPGQADFISGGPPCQGFSGMNRF--SDGSWSKVQCEMILAFLSFADYFRPKYFLLENV 1218
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
V + KG + +A L+++ YQVR G++ AG YG+ Q R RV +W A P E LP +
Sbjct: 1219 KKFVTYNKGRTFQLTMASLLEIGYQVRFGILEAGTYGVSQPRKRVIIWAASPEEVLPEWP 1278
Query: 637 LPTHDVVLRG---VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIP 693
P H G +P +TV + R + ++D I DLP V+N ES+
Sbjct: 1279 EPMHVFDNPGSKISLPRGLHYDTVR--NTKFGAPFRSITVRDTIGDLPLVENGESKINKE 1336
Query: 694 YDREPETEFQCFIR 707
Y P + FQ IR
Sbjct: 1337 YRTTPVSWFQKKIR 1350
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 78/179 (43%), Gaps = 26/179 (14%)
Query: 228 YYRARDTVIESNAHLIDQRRVFFSEIQNDNPLECLVKKLNIAR---VPLNIDLEAKKLAI 284
+YR D + E A+ D + +++S P E L K + + +PL ++ I
Sbjct: 951 FYRPED-ISEEKAYASDIQELYYSHDTYILPPEALQGKCEVRKKNDMPL-----CREYPI 1004
Query: 285 PHCDYYCDMMYLLPYSTFFSLPPENK-RVSSETSSTISSDVDANECEVGE---------- 333
++C++ Y P K + S+ T+ + E G
Sbjct: 1005 LDHIFFCEVFYDSSTGYLKQFPANMKLKFSTIKDETLLREKKGKGVETGTSSGILMKPDE 1064
Query: 334 -PQKMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEV 391
P++M + LD+++GCG +S GL AG++ T+WA++ E A + K NHPE V
Sbjct: 1065 VPKEMRLATLDIFAGCGGLSHGL----EKAGVS-NTKWAIEYEEPAGHAFKQNHPEATV 1118
>gi|214010196|ref|NP_445806.3| DNA (cytosine-5)-methyltransferase 1 [Rattus norvegicus]
gi|149020535|gb|EDL78340.1| DNA (cytosine-5-)-methyltransferase 1, isoform CRA_b [Rattus
norvegicus]
Length = 1621
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 107/197 (54%), Gaps = 12/197 (6%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P+F L+ENV
Sbjct: 1215 LPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRPRFFLLENV 1272
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F + ++ + L L++M YQ G++ AG YG+ Q R R + A P EKLP +
Sbjct: 1273 RNFVSFRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFP 1332
Query: 637 LPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRD 690
P H R V +F N G R + ++D +SDLP + N S
Sbjct: 1333 EPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEIQNGASAP 1388
Query: 691 EIPYDREPETEFQCFIR 707
EI Y+ EP++ FQ +R
Sbjct: 1389 EISYNGEPQSWFQRQLR 1405
Score = 46.2 bits (108), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 12/108 (11%)
Query: 303 FSLPPENKRVSSETSSTISSDVDANECEVGEPQKMD-------VKLLDLYSGCGAMSTGL 355
F PP + R + +V EP++ + ++ LD++SGCG GL
Sbjct: 1100 FEDPPNHARSPGNKGKGKGKGKGKGKPQVSEPKEPEAAIKLPKLRTLDVFSGCG----GL 1155
Query: 356 CLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLL 403
G + AG++ T WA+++ E A Q+ +LN+P T V E L L+
Sbjct: 1156 TEGFHQAGIS-ETLWAIEMWEPAAQAFRLNNPGTTVFTEDCNVLLKLV 1202
>gi|62088406|dbj|BAD92650.1| DNA (cytosine-5-)-methyltransferase 1 variant [Homo sapiens]
Length = 1606
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 74/205 (36%), Positives = 110/205 (53%), Gaps = 12/205 (5%)
Query: 509 THGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKP 568
T + + LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P
Sbjct: 1190 TTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRP 1247
Query: 569 KFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQP 628
+F L+ENV + V F + ++ + L L++M YQ G++ AG YG+ Q R R + A P
Sbjct: 1248 RFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAP 1307
Query: 629 TEKLPPYALPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPS 682
EKLP + P H R V +F N G R + ++D +SDLP
Sbjct: 1308 GEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPE 1363
Query: 683 VDNYESRDEIPYDREPETEFQCFIR 707
V N S EI Y+ EP++ FQ +R
Sbjct: 1364 VRNGASALEISYNGEPQSWFQRQLR 1388
Score = 45.8 bits (107), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 11/83 (13%)
Query: 326 ANECEVGEPQKMDVKL-----LDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQ 380
+ CE EP+ +++KL LD++SGCG +S G + AG++ T WA+++ + A Q
Sbjct: 1109 SQACEPSEPE-IEIKLPKLRTLDVFSGCGGLSEGF----HQAGIS-DTLWAIEMWDPAAQ 1162
Query: 381 SLKLNHPETEVRNESAEDFLTLL 403
+ +LN+P + V E L L+
Sbjct: 1163 AFRLNNPGSTVFTEDCNILLKLV 1185
>gi|307193684|gb|EFN76367.1| DNA (cytosine-5)-methyltransferase 1 [Harpegnathos saltator]
Length = 1460
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 71/195 (36%), Positives = 110/195 (56%), Gaps = 10/195 (5%)
Query: 518 PLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVV 577
P G+V+++CGGPPCQG SG NRF + L KN ++ + +D+ +PKF +MENV
Sbjct: 1009 PQKGEVELLCGGPPCQGFSGMNRFNLRQYSLF--KNSLVVSCLSYLDYYRPKFFVMENVR 1066
Query: 578 DIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYAL 637
+ V F + ++ + L L++M YQ G++ AG YG+PQ R R+ + A P E LP Y
Sbjct: 1067 NFVTFKRSMVLKLTLCCLVRMGYQCTFGILQAGNYGVPQTRRRLIILAAAPGETLPCYPE 1126
Query: 638 PTHDVVLRG-----VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEI 692
PT+ R V+ + A+ E R + ++DA+SDLP + N +++E+
Sbjct: 1127 PTNVFTRRCCRLSVVVDNRKYSSNCAWKESAP---FRTISVRDAMSDLPPIKNGWNKEEM 1183
Query: 693 PYDREPETEFQCFIR 707
PY EP + FQ +R
Sbjct: 1184 PYGNEPMSHFQRKVR 1198
>gi|149020536|gb|EDL78341.1| DNA (cytosine-5-)-methyltransferase 1, isoform CRA_c [Rattus
norvegicus]
Length = 1634
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 107/197 (54%), Gaps = 12/197 (6%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P+F L+ENV
Sbjct: 1228 LPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRPRFFLLENV 1285
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F + ++ + L L++M YQ G++ AG YG+ Q R R + A P EKLP +
Sbjct: 1286 RNFVSFRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFP 1345
Query: 637 LPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRD 690
P H R V +F N G R + ++D +SDLP + N S
Sbjct: 1346 EPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEIQNGASAP 1401
Query: 691 EIPYDREPETEFQCFIR 707
EI Y+ EP++ FQ +R
Sbjct: 1402 EISYNGEPQSWFQRQLR 1418
Score = 46.2 bits (108), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 12/108 (11%)
Query: 303 FSLPPENKRVSSETSSTISSDVDANECEVGEPQKMD-------VKLLDLYSGCGAMSTGL 355
F PP + R + +V EP++ + ++ LD++SGCG GL
Sbjct: 1113 FEDPPNHARSPGNKGKGKGKGKGKGKPQVSEPKEPEAAIKLPKLRTLDVFSGCG----GL 1168
Query: 356 CLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLL 403
G + AG++ T WA+++ E A Q+ +LN+P T V E L L+
Sbjct: 1169 TEGFHQAGIS-ETLWAIEMWEPAAQAFRLNNPGTTVFTEDCNVLLKLV 1215
>gi|315583643|pdb|3PT6|A Chain A, Crystal Structure Of Mouse Dnmt1(650-1602) In Complex With
Dna
gi|315583644|pdb|3PT6|B Chain B, Crystal Structure Of Mouse Dnmt1(650-1602) In Complex With
Dna
Length = 954
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 107/197 (54%), Gaps = 12/197 (6%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P+F L+ENV
Sbjct: 566 LPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRPRFFLLENV 623
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V + + ++ + L L++M YQ G++ AG YG+ Q R R + A P EKLP +
Sbjct: 624 RNFVSYRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFP 683
Query: 637 LPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRD 690
P H R V +F N G R + ++D +SDLP + N S
Sbjct: 684 EPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEIQNGASNS 739
Query: 691 EIPYDREPETEFQCFIR 707
EIPY+ EP + FQ +R
Sbjct: 740 EIPYNGEPLSWFQRQLR 756
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 12/112 (10%)
Query: 303 FSLPPENKRVSSETSSTISSDVDANECEVGEPQKMD-------VKLLDLYSGCGAMSTGL 355
F PP + R + +V EP++ + ++ LD++SGCG +S G
Sbjct: 451 FEDPPNHARSPGNKGKGKGKGKGKGKHQVSEPKEPEAAIKLPKLRTLDVFSGCGGLSEGF 510
Query: 356 CLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWE 407
+ AG++ T WA+++ + A Q+ +LN+P T V E L L+ E
Sbjct: 511 ----HQAGIS-ETLWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLLKLVMAGE 557
>gi|332852917|ref|XP_512361.3| PREDICTED: DNA (cytosine-5)-methyltransferase 1 isoform 11 [Pan
troglodytes]
gi|410226624|gb|JAA10531.1| DNA (cytosine-5-)-methyltransferase 1 [Pan troglodytes]
gi|410308688|gb|JAA32944.1| DNA (cytosine-5-)-methyltransferase 1 [Pan troglodytes]
Length = 1632
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 74/205 (36%), Positives = 110/205 (53%), Gaps = 12/205 (5%)
Query: 509 THGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKP 568
T + + LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P
Sbjct: 1219 TTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRP 1276
Query: 569 KFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQP 628
+F L+ENV + V F + ++ + L L++M YQ G++ AG YG+ Q R R + A P
Sbjct: 1277 RFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAP 1336
Query: 629 TEKLPPYALPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPS 682
EKLP + P H R V +F N G R + ++D +SDLP
Sbjct: 1337 GEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPE 1392
Query: 683 VDNYESRDEIPYDREPETEFQCFIR 707
V N S EI Y+ EP++ FQ +R
Sbjct: 1393 VRNGASALEISYNGEPQSWFQRQLR 1417
Score = 45.8 bits (107), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 11/83 (13%)
Query: 326 ANECEVGEPQKMDVKL-----LDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQ 380
+ CE EP+ +++KL LD++SGCG +S G + AG++ T WA+++ + A Q
Sbjct: 1138 SQACEPSEPE-IEIKLPKLRTLDVFSGCGGLSEGF----HQAGIS-DTLWAIEMWDPAAQ 1191
Query: 381 SLKLNHPETEVRNESAEDFLTLL 403
+ +LN+P + V E L L+
Sbjct: 1192 AFRLNNPGSTVFTEDCNILLKLV 1214
>gi|195927037|ref|NP_001124295.1| DNA (cytosine-5)-methyltransferase 1 isoform a [Homo sapiens]
gi|116496659|gb|AAI26228.1| DNMT1 protein [Homo sapiens]
gi|219521538|gb|AAI44094.1| DNA (cytosine-5-)-methyltransferase 1 [Homo sapiens]
Length = 1632
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 74/205 (36%), Positives = 110/205 (53%), Gaps = 12/205 (5%)
Query: 509 THGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKP 568
T + + LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P
Sbjct: 1219 TTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRP 1276
Query: 569 KFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQP 628
+F L+ENV + V F + ++ + L L++M YQ G++ AG YG+ Q R R + A P
Sbjct: 1277 RFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAP 1336
Query: 629 TEKLPPYALPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPS 682
EKLP + P H R V +F N G R + ++D +SDLP
Sbjct: 1337 GEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPE 1392
Query: 683 VDNYESRDEIPYDREPETEFQCFIR 707
V N S EI Y+ EP++ FQ +R
Sbjct: 1393 VRNGASALEISYNGEPQSWFQRQLR 1417
Score = 45.8 bits (107), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 11/83 (13%)
Query: 326 ANECEVGEPQKMDVKL-----LDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQ 380
+ CE EP+ +++KL LD++SGCG +S G + AG++ T WA+++ + A Q
Sbjct: 1138 SQACEPSEPE-IEIKLPKLRTLDVFSGCGGLSEGF----HQAGIS-DTLWAIEMWDPAAQ 1191
Query: 381 SLKLNHPETEVRNESAEDFLTLL 403
+ +LN+P + V E L L+
Sbjct: 1192 AFRLNNPGSTVFTEDCNILLKLV 1214
>gi|3818628|gb|AAC69603.1| DNA methyltransferase [Danio rerio]
Length = 700
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 108/193 (55%), Gaps = 4/193 (2%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP GDV+++CGGPPCQG SG NRF ++ + KN ++ ++ D+ +P+F L+ENV
Sbjct: 295 LPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSYLSYCDYYRPRFFLLENV 352
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F + ++ + L L++M YQ G++ AG YG+ Q R R + A P EKLP Y
Sbjct: 353 RNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPRYP 412
Query: 637 LPTHDVVLRGVIPTEF--ERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPY 694
P H R + E+ V+ + R + ++D +SDLP + N + EI Y
Sbjct: 413 EPLHVFAPRACSLSVAVDEKKYVSNVTRGNGGIYRTITVRDTMSDLPEIRNGAAALEISY 472
Query: 695 DREPETEFQCFIR 707
+ EP++ FQ IR
Sbjct: 473 NGEPQSWFQRQIR 485
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 9/91 (9%)
Query: 333 EPQKMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVR 392
EP ++ LD++SGCG +S G + AG++ T WA+++ + A Q+ +LN+P T V
Sbjct: 217 EPVVPKLRTLDVFSGCGGLSEGF----HQAGIS-ETHWAIEMWDPAAQAFRLNNPGTTVF 271
Query: 393 NESAEDFLTLLREWEKLCISFSLIARKDPQQ 423
E L L+ EK + + +K PQ+
Sbjct: 272 TEDCNVLLKLVMSGEKT----NSLGQKLPQK 298
>gi|410226626|gb|JAA10532.1| DNA (cytosine-5-)-methyltransferase 1 [Pan troglodytes]
gi|410308690|gb|JAA32945.1| DNA (cytosine-5-)-methyltransferase 1 [Pan troglodytes]
Length = 1616
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 74/205 (36%), Positives = 110/205 (53%), Gaps = 12/205 (5%)
Query: 509 THGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKP 568
T + + LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P
Sbjct: 1203 TTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRP 1260
Query: 569 KFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQP 628
+F L+ENV + V F + ++ + L L++M YQ G++ AG YG+ Q R R + A P
Sbjct: 1261 RFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAP 1320
Query: 629 TEKLPPYALPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPS 682
EKLP + P H R V +F N G R + ++D +SDLP
Sbjct: 1321 GEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPE 1376
Query: 683 VDNYESRDEIPYDREPETEFQCFIR 707
V N S EI Y+ EP++ FQ +R
Sbjct: 1377 VRNGASALEISYNGEPQSWFQRQLR 1401
Score = 45.8 bits (107), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 11/83 (13%)
Query: 326 ANECEVGEPQKMDVKL-----LDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQ 380
+ CE EP+ +++KL LD++SGCG +S G + AG++ T WA+++ + A Q
Sbjct: 1122 SQACEPSEPE-IEIKLPKLRTLDVFSGCGGLSEGF----HQAGIS-DTLWAIEMWDPAAQ 1175
Query: 381 SLKLNHPETEVRNESAEDFLTLL 403
+ +LN+P + V E L L+
Sbjct: 1176 AFRLNNPGSTVFTEDCNILLKLV 1198
>gi|350410581|ref|XP_003489082.1| PREDICTED: DNA (cytosine-5)-methyltransferase PliMCI-like [Bombus
impatiens]
Length = 1441
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 107/193 (55%), Gaps = 4/193 (2%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP G+V+++CGGPPCQG SG NRF ++ L KN + + D+ +PKF +MENV
Sbjct: 1040 LPQKGEVELLCGGPPCQGFSGMNRFNSRQYSLF--KNSLVASCLSYCDYYRPKFFIMENV 1097
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F + ++ + L L++M YQ G++ AG YG+PQ R R+ + A P E LP Y
Sbjct: 1098 RNFVSFKRSMVLKLTLRCLVRMGYQCTFGILQAGNYGIPQTRRRLIILAAAPGEVLPKYP 1157
Query: 637 LPTHDVVLRGVIPTEFERNTVAYDEGQQAELA--RKLLLQDAISDLPSVDNYESRDEIPY 694
PTH R + N E A R + ++DA+SDLP++ N + +E+ Y
Sbjct: 1158 EPTHVFSKRACQLSVIVDNKKYSSNCDWIESAPYRTISVRDAMSDLPNIRNGWNTEEMAY 1217
Query: 695 DREPETEFQCFIR 707
EP + FQ +R
Sbjct: 1218 SDEPISHFQRKVR 1230
>gi|355703123|gb|EHH29614.1| DNA (cytosine-5)-methyltransferase 1 [Macaca mulatta]
Length = 1632
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 74/205 (36%), Positives = 110/205 (53%), Gaps = 12/205 (5%)
Query: 509 THGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKP 568
T + + LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P
Sbjct: 1219 TTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRP 1276
Query: 569 KFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQP 628
+F L+ENV + V F + ++ + L L++M YQ G++ AG YG+ Q R R + A P
Sbjct: 1277 RFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAP 1336
Query: 629 TEKLPPYALPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPS 682
EKLP + P H R V +F N G R + ++D +SDLP
Sbjct: 1337 GEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPE 1392
Query: 683 VDNYESRDEIPYDREPETEFQCFIR 707
V N S EI Y+ EP++ FQ +R
Sbjct: 1393 VRNGASALEISYNGEPQSWFQRQLR 1417
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 11/83 (13%)
Query: 326 ANECEVGEPQKMDVKL-----LDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQ 380
+ CE EP+ M++KL LD++SGCG +S G + AG++ T WA+++ + A Q
Sbjct: 1138 SQACEPSEPE-MEIKLPKLRTLDVFSGCGGLSEGF----HQAGIS-DTLWAIEMWDPAAQ 1191
Query: 381 SLKLNHPETEVRNESAEDFLTLL 403
+ +LN+P + V E L L+
Sbjct: 1192 AFRLNNPGSTVFTEDCNILLKLV 1214
>gi|395750441|ref|XP_002828696.2| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase 1
[Pongo abelii]
Length = 1602
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 74/205 (36%), Positives = 110/205 (53%), Gaps = 12/205 (5%)
Query: 509 THGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKP 568
T + + LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P
Sbjct: 1189 TTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRP 1246
Query: 569 KFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQP 628
+F L+ENV + V F + ++ + L L++M YQ G++ AG YG+ Q R R + A P
Sbjct: 1247 RFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAP 1306
Query: 629 TEKLPPYALPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPS 682
EKLP + P H R V +F N G R + ++D +SDLP
Sbjct: 1307 GEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPE 1362
Query: 683 VDNYESRDEIPYDREPETEFQCFIR 707
V N S EI Y+ EP++ FQ +R
Sbjct: 1363 VRNGASALEISYNGEPQSWFQRQLR 1387
Score = 45.8 bits (107), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 11/83 (13%)
Query: 326 ANECEVGEPQKMDVKL-----LDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQ 380
+ CE EP+ +++KL LD++SGCG +S G + AG++ T WA+++ + A Q
Sbjct: 1108 SQACEPSEPE-IEIKLPKLRTLDVFSGCGGLSEGF----HQAGIS-DTLWAIEMWDPAAQ 1161
Query: 381 SLKLNHPETEVRNESAEDFLTLL 403
+ +LN+P + V E L L+
Sbjct: 1162 AFRLNNPGSTVFTEDCNILLKLV 1184
>gi|441628422|ref|XP_003275776.2| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase 1
isoform 1 [Nomascus leucogenys]
Length = 1616
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 74/205 (36%), Positives = 110/205 (53%), Gaps = 12/205 (5%)
Query: 509 THGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKP 568
T + + LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P
Sbjct: 1203 TTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRP 1260
Query: 569 KFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQP 628
+F L+ENV + V F + ++ + L L++M YQ G++ AG YG+ Q R R + A P
Sbjct: 1261 RFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAP 1320
Query: 629 TEKLPPYALPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPS 682
EKLP + P H R V +F N G R + ++D +SDLP
Sbjct: 1321 GEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPE 1376
Query: 683 VDNYESRDEIPYDREPETEFQCFIR 707
V N S EI Y+ EP++ FQ +R
Sbjct: 1377 VRNGASALEISYNGEPQSWFQRQLR 1401
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 11/83 (13%)
Query: 326 ANECEVGEPQKMDVKL-----LDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQ 380
+ CE EP+ M++KL LD++SGCG +S G + AG++ T WA+++ + A Q
Sbjct: 1122 SQACEPSEPE-MEIKLPKLRTLDVFSGCGGLSEGF----HQAGIS-DTLWAIEMWDPAAQ 1175
Query: 381 SLKLNHPETEVRNESAEDFLTLL 403
+ +LN+P + V E L L+
Sbjct: 1176 AFRLNNPGSTVFTEDCNILLKLV 1198
>gi|410226628|gb|JAA10533.1| DNA (cytosine-5-)-methyltransferase 1 [Pan troglodytes]
Length = 1635
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 74/205 (36%), Positives = 110/205 (53%), Gaps = 12/205 (5%)
Query: 509 THGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKP 568
T + + LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P
Sbjct: 1219 TTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRP 1276
Query: 569 KFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQP 628
+F L+ENV + V F + ++ + L L++M YQ G++ AG YG+ Q R R + A P
Sbjct: 1277 RFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAP 1336
Query: 629 TEKLPPYALPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPS 682
EKLP + P H R V +F N G R + ++D +SDLP
Sbjct: 1337 GEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPE 1392
Query: 683 VDNYESRDEIPYDREPETEFQCFIR 707
V N S EI Y+ EP++ FQ +R
Sbjct: 1393 VRNGASALEISYNGEPQSWFQRQLR 1417
Score = 45.8 bits (107), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 11/83 (13%)
Query: 326 ANECEVGEPQKMDVKL-----LDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQ 380
+ CE EP+ +++KL LD++SGCG +S G + AG++ T WA+++ + A Q
Sbjct: 1138 SQACEPSEPE-IEIKLPKLRTLDVFSGCGGLSEGF----HQAGIS-DTLWAIEMWDPAAQ 1191
Query: 381 SLKLNHPETEVRNESAEDFLTLL 403
+ +LN+P + V E L L+
Sbjct: 1192 AFRLNNPGSTVFTEDCNILLKLV 1214
>gi|344282773|ref|XP_003413147.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 isoform 2 [Loxodonta
africana]
Length = 1625
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 73/201 (36%), Positives = 109/201 (54%), Gaps = 12/201 (5%)
Query: 513 KSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVL 572
+ + LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P+F L
Sbjct: 1216 RGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRPRFFL 1273
Query: 573 MENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKL 632
+ENV + V F + ++ + L L++M YQ G++ AG YG+ Q R R + A P EKL
Sbjct: 1274 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKL 1333
Query: 633 PPYALPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNY 686
P + P H R V +F N G R + ++D +SDLP V N
Sbjct: 1334 PLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEVRNG 1389
Query: 687 ESRDEIPYDREPETEFQCFIR 707
S EI Y+ EP++ FQ +R
Sbjct: 1390 ASALEISYNGEPQSWFQRQLR 1410
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 11/88 (12%)
Query: 326 ANECEVGEPQKMDVKL-----LDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQ 380
+ CE EP+ M+VKL LD++SGCG +S G + AG++ T WA+++ + A Q
Sbjct: 1131 SQACEPSEPE-MEVKLPKLRTLDVFSGCGGLSEGF----HQAGIS-ETLWAIEMWDPAAQ 1184
Query: 381 SLKLNHPETEVRNESAEDFLTLLREWEK 408
+ +LN+P + V E L L+ E+
Sbjct: 1185 AFRLNNPGSTVFTEDCNVLLKLVMAGEE 1212
>gi|315583649|pdb|3PT9|A Chain A, Crystal Structure Of Mouse Dnmt1(731-1602) In The Free
State
gi|377656587|pdb|4DA4|A Chain A, Structure Of Mouse Dnmt1 (731-1602) Bound To
Hemimethylated Cpg Dna
gi|377656588|pdb|4DA4|B Chain B, Structure Of Mouse Dnmt1 (731-1602) Bound To
Hemimethylated Cpg Dna
Length = 873
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 107/197 (54%), Gaps = 12/197 (6%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P+F L+ENV
Sbjct: 485 LPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRPRFFLLENV 542
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V + + ++ + L L++M YQ G++ AG YG+ Q R R + A P EKLP +
Sbjct: 543 RNFVSYRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFP 602
Query: 637 LPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRD 690
P H R V +F N G R + ++D +SDLP + N S
Sbjct: 603 EPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEIQNGASNS 658
Query: 691 EIPYDREPETEFQCFIR 707
EIPY+ EP + FQ +R
Sbjct: 659 EIPYNGEPLSWFQRQLR 675
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 12/108 (11%)
Query: 303 FSLPPENKRVSSETSSTISSDVDANECEVGEPQKMD-------VKLLDLYSGCGAMSTGL 355
F PP + R + +V EP++ + ++ LD++SGCG +S G
Sbjct: 370 FEDPPNHARSPGNKGKGKGKGKGKGKHQVSEPKEPEAAIKLPKLRTLDVFSGCGGLSEGF 429
Query: 356 CLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLL 403
+ AG++ T WA+++ + A Q+ +LN+P T V E L L+
Sbjct: 430 ----HQAGIS-ETLWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLLKLV 472
>gi|4503351|ref|NP_001370.1| DNA (cytosine-5)-methyltransferase 1 isoform b [Homo sapiens]
gi|12231019|sp|P26358.2|DNMT1_HUMAN RecName: Full=DNA (cytosine-5)-methyltransferase 1; Short=Dnmt1;
AltName: Full=CXXC-type zinc finger protein 9; AltName:
Full=DNA methyltransferase HsaI; Short=DNA MTase HsaI;
Short=M.HsaI; AltName: Full=MCMT
gi|1632819|emb|CAA45219.1| DNA (cytosine-5-)-methyltransferase [Homo sapiens]
Length = 1616
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 74/205 (36%), Positives = 110/205 (53%), Gaps = 12/205 (5%)
Query: 509 THGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKP 568
T + + LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P
Sbjct: 1203 TTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRP 1260
Query: 569 KFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQP 628
+F L+ENV + V F + ++ + L L++M YQ G++ AG YG+ Q R R + A P
Sbjct: 1261 RFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAP 1320
Query: 629 TEKLPPYALPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPS 682
EKLP + P H R V +F N G R + ++D +SDLP
Sbjct: 1321 GEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPE 1376
Query: 683 VDNYESRDEIPYDREPETEFQCFIR 707
V N S EI Y+ EP++ FQ +R
Sbjct: 1377 VRNGASALEISYNGEPQSWFQRQLR 1401
Score = 45.8 bits (107), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 11/83 (13%)
Query: 326 ANECEVGEPQKMDVKL-----LDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQ 380
+ CE EP+ +++KL LD++SGCG +S G + AG++ T WA+++ + A Q
Sbjct: 1122 SQACEPSEPE-IEIKLPKLRTLDVFSGCGGLSEGF----HQAGIS-DTLWAIEMWDPAAQ 1175
Query: 381 SLKLNHPETEVRNESAEDFLTLL 403
+ +LN+P + V E L L+
Sbjct: 1176 AFRLNNPGSTVFTEDCNILLKLV 1198
>gi|348546033|ref|XP_003460483.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like, partial
[Oreochromis niloticus]
Length = 772
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 107/193 (55%), Gaps = 4/193 (2%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP GDV+++CGGPPCQG SG NRF ++ + KN ++ ++ D+ +PKF L+ENV
Sbjct: 520 LPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSYLSYCDYYRPKFFLLENV 577
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F ++ + L L++M YQ G++ AG YG+ Q R R + A P EKLP Y
Sbjct: 578 RNFVSFKNSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPRYP 637
Query: 637 LPTHDVVLRGVIPTEF--ERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPY 694
P H R + E+ V+ + R + ++D +SDLP + N + EI Y
Sbjct: 638 EPLHVFAPRACSLSVVVGEKRYVSNVTRGNGGIYRTITVRDTMSDLPEIRNGAAALEISY 697
Query: 695 DREPETEFQCFIR 707
+ EP++ FQ IR
Sbjct: 698 NGEPQSWFQRQIR 710
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 9/91 (9%)
Query: 333 EPQKMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVR 392
+P+ + LD++SGCG +S G + AG++ T WA+++ E A Q+ +LN+P T V
Sbjct: 442 KPKVPKYRTLDVFSGCGGLSEGF----HQAGIS-ETLWAIEMWEPAAQAFRLNNPGTTVF 496
Query: 393 NESAEDFLTLLREWEKLCISFSLIARKDPQQ 423
E L L+ EK + + +K PQ+
Sbjct: 497 TEDCNVLLKLVMSGEKT----NSLGQKLPQK 523
>gi|410902659|ref|XP_003964811.1| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase
1-like [Takifugu rubripes]
Length = 1493
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 108/197 (54%), Gaps = 12/197 (6%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP GDV+++CGGPPCQG SG NRF ++ + KN ++ ++ D+ +PKF L+ENV
Sbjct: 1087 LPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSAFKNSLVVSYLSYCDYYRPKFFLLENV 1144
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F ++ + L L++M YQ G++ AG YG+ Q R R + A P E+LP Y
Sbjct: 1145 RNFVSFKSSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEELPRYP 1204
Query: 637 LPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRD 690
P H R V +F N + G + R + ++D +SDLP + N S
Sbjct: 1205 EPLHVFAPRACSLNVVVDDKKFVSNVTRGNGG----IYRTITVRDTMSDLPEIRNGASAL 1260
Query: 691 EIPYDREPETEFQCFIR 707
EI Y+ EP++ FQ IR
Sbjct: 1261 EISYNGEPQSWFQRQIR 1277
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 12/94 (12%)
Query: 333 EPQKMDV---KLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPET 389
EPQ V + LD++SGCG +S G + AG++ + WA+++ E A Q+ +LN+P
Sbjct: 1006 EPQMPKVPKYRTLDVFSGCGGLSEGF----HQAGIS-ESLWAIEMWEPAAQAFRLNNPGA 1060
Query: 390 EVRNESAEDFLTLLREWEKLCISFSLIARKDPQQ 423
V E L L+ EK + + +K PQ+
Sbjct: 1061 TVFTEDCNILLKLVMSGEKT----NSLGQKLPQK 1090
>gi|149020534|gb|EDL78339.1| DNA (cytosine-5-)-methyltransferase 1, isoform CRA_a [Rattus
norvegicus]
Length = 1503
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 107/197 (54%), Gaps = 12/197 (6%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P+F L+ENV
Sbjct: 1097 LPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRPRFFLLENV 1154
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F + ++ + L L++M YQ G++ AG YG+ Q R R + A P EKLP +
Sbjct: 1155 RNFVSFRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFP 1214
Query: 637 LPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRD 690
P H R V +F N G R + ++D +SDLP + N S
Sbjct: 1215 EPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEIQNGASAP 1270
Query: 691 EIPYDREPETEFQCFIR 707
EI Y+ EP++ FQ +R
Sbjct: 1271 EISYNGEPQSWFQRQLR 1287
Score = 46.6 bits (109), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 12/108 (11%)
Query: 303 FSLPPENKRVSSETSSTISSDVDANECEVGEPQKMD-------VKLLDLYSGCGAMSTGL 355
F PP + R + +V EP++ + ++ LD++SGCG GL
Sbjct: 982 FEDPPNHARSPGNKGKGKGKGKGKGKPQVSEPKEPEAAIKLPKLRTLDVFSGCG----GL 1037
Query: 356 CLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLL 403
G + AG++ T WA+++ E A Q+ +LN+P T V E L L+
Sbjct: 1038 TEGFHQAGIS-ETLWAIEMWEPAAQAFRLNNPGTTVFTEDCNVLLKLV 1084
>gi|403296174|ref|XP_003938993.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Saimiri boliviensis
boliviensis]
Length = 1683
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 74/205 (36%), Positives = 110/205 (53%), Gaps = 12/205 (5%)
Query: 509 THGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKP 568
T + + LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P
Sbjct: 1271 TTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRP 1328
Query: 569 KFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQP 628
+F L+ENV + V F + ++ + L L++M YQ G++ AG YG+ Q R R + A P
Sbjct: 1329 RFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAP 1388
Query: 629 TEKLPPYALPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPS 682
EKLP + P H R V +F N G R + ++D +SDLP
Sbjct: 1389 GEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPE 1444
Query: 683 VDNYESRDEIPYDREPETEFQCFIR 707
V N S EI Y+ EP++ FQ +R
Sbjct: 1445 VRNGASALEISYNGEPQSWFQRQLR 1469
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 11/87 (12%)
Query: 326 ANECEVGEPQKMDVKL-----LDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQ 380
+ CE EP+ ++KL LD++SGCG +S G + AG++ T WA+++ + A Q
Sbjct: 1190 SQACEPSEPE-TEIKLPKLRTLDVFSGCGGLSEGF----HQAGIS-ETLWAIEMWDPAAQ 1243
Query: 381 SLKLNHPETEVRNESAEDFLTLLREWE 407
+ +LN+P + V E L L+ E
Sbjct: 1244 AFRLNNPGSTVFTEDCNVLLKLVMAGE 1270
>gi|355755438|gb|EHH59185.1| DNA (cytosine-5)-methyltransferase 1 [Macaca fascicularis]
Length = 1541
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 74/205 (36%), Positives = 110/205 (53%), Gaps = 12/205 (5%)
Query: 509 THGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKP 568
T + + LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P
Sbjct: 1128 TTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRP 1185
Query: 569 KFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQP 628
+F L+ENV + V F + ++ + L L++M YQ G++ AG YG+ Q R R + A P
Sbjct: 1186 RFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAP 1245
Query: 629 TEKLPPYALPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPS 682
EKLP + P H R V +F N G R + ++D +SDLP
Sbjct: 1246 GEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPE 1301
Query: 683 VDNYESRDEIPYDREPETEFQCFIR 707
V N S EI Y+ EP++ FQ +R
Sbjct: 1302 VRNGASALEISYNGEPQSWFQRQLR 1326
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 11/87 (12%)
Query: 326 ANECEVGEPQKMDVKL-----LDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQ 380
+ CE EP+ M++KL LD++SGCG +S G + AG++ T WA+++ + A Q
Sbjct: 1047 SQACEPSEPE-MEIKLPKLRTLDVFSGCGGLSEGF----HQAGIS-DTLWAIEMWDPAAQ 1100
Query: 381 SLKLNHPETEVRNESAEDFLTLLREWE 407
+ +LN+P + V E L L+ E
Sbjct: 1101 AFRLNNPGSTVFTEDCNILLKLVMAGE 1127
>gi|344282771|ref|XP_003413146.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 isoform 1 [Loxodonta
africana]
Length = 1611
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 73/201 (36%), Positives = 109/201 (54%), Gaps = 12/201 (5%)
Query: 513 KSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVL 572
+ + LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P+F L
Sbjct: 1202 RGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRPRFFL 1259
Query: 573 MENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKL 632
+ENV + V F + ++ + L L++M YQ G++ AG YG+ Q R R + A P EKL
Sbjct: 1260 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKL 1319
Query: 633 PPYALPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNY 686
P + P H R V +F N G R + ++D +SDLP V N
Sbjct: 1320 PLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEVRNG 1375
Query: 687 ESRDEIPYDREPETEFQCFIR 707
S EI Y+ EP++ FQ +R
Sbjct: 1376 ASALEISYNGEPQSWFQRQLR 1396
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 63/137 (45%), Gaps = 23/137 (16%)
Query: 284 IPHC--DYYC---DMMYLL----PYSTFFSLPPENKR---VSSETSSTISSDVDANECEV 331
+P C DY D Y L S F PP + R + + CE
Sbjct: 1063 LPECVQDYSAGGPDRFYFLEAYNAKSKSFEDPPNHARSPGNKGKGKGKGKGKAKSQACEP 1122
Query: 332 GEPQKMDVKL-----LDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH 386
EP+ M+VKL LD++SGCG +S G + AG++ T WA+++ + A Q+ +LN+
Sbjct: 1123 SEPE-MEVKLPKLRTLDVFSGCGGLSEGF----HQAGIS-ETLWAIEMWDPAAQAFRLNN 1176
Query: 387 PETEVRNESAEDFLTLL 403
P + V E L L+
Sbjct: 1177 PGSTVFTEDCNVLLKLV 1193
>gi|380786361|gb|AFE65056.1| DNA (cytosine-5)-methyltransferase 1 isoform b [Macaca mulatta]
Length = 1616
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 74/205 (36%), Positives = 110/205 (53%), Gaps = 12/205 (5%)
Query: 509 THGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKP 568
T + + LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P
Sbjct: 1203 TTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRP 1260
Query: 569 KFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQP 628
+F L+ENV + V F + ++ + L L++M YQ G++ AG YG+ Q R R + A P
Sbjct: 1261 RFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAP 1320
Query: 629 TEKLPPYALPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPS 682
EKLP + P H R V +F N G R + ++D +SDLP
Sbjct: 1321 GEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPE 1376
Query: 683 VDNYESRDEIPYDREPETEFQCFIR 707
V N S EI Y+ EP++ FQ +R
Sbjct: 1377 VRNGASALEISYNGEPQSWFQRQLR 1401
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 11/83 (13%)
Query: 326 ANECEVGEPQKMDVKL-----LDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQ 380
+ CE EP+ M++KL LD++SGCG +S G + AG++ T WA+++ + A Q
Sbjct: 1122 SQACEPSEPE-MEIKLPKLRTLDVFSGCGGLSEGF----HQAGIS-DTLWAIEMWDPAAQ 1175
Query: 381 SLKLNHPETEVRNESAEDFLTLL 403
+ +LN+P + V E L L+
Sbjct: 1176 AFRLNNPGSTVFTEDCNILLKLV 1198
>gi|410053162|ref|XP_003953403.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Pan troglodytes]
Length = 1511
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 74/205 (36%), Positives = 110/205 (53%), Gaps = 12/205 (5%)
Query: 509 THGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKP 568
T + + LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P
Sbjct: 1098 TTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRP 1155
Query: 569 KFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQP 628
+F L+ENV + V F + ++ + L L++M YQ G++ AG YG+ Q R R + A P
Sbjct: 1156 RFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAP 1215
Query: 629 TEKLPPYALPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPS 682
EKLP + P H R V +F N G R + ++D +SDLP
Sbjct: 1216 GEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPE 1271
Query: 683 VDNYESRDEIPYDREPETEFQCFIR 707
V N S EI Y+ EP++ FQ +R
Sbjct: 1272 VRNGASALEISYNGEPQSWFQRQLR 1296
Score = 45.8 bits (107), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 11/83 (13%)
Query: 326 ANECEVGEPQKMDVKL-----LDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQ 380
+ CE EP+ +++KL LD++SGCG +S G + AG++ T WA+++ + A Q
Sbjct: 1017 SQACEPSEPE-IEIKLPKLRTLDVFSGCGGLSEGF----HQAGIS-DTLWAIEMWDPAAQ 1070
Query: 381 SLKLNHPETEVRNESAEDFLTLL 403
+ +LN+P + V E L L+
Sbjct: 1071 AFRLNNPGSTVFTEDCNILLKLV 1093
>gi|62204780|gb|AAH92517.1| DNMT1 protein [Homo sapiens]
Length = 1511
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 74/205 (36%), Positives = 110/205 (53%), Gaps = 12/205 (5%)
Query: 509 THGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKP 568
T + + LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P
Sbjct: 1098 TTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRP 1155
Query: 569 KFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQP 628
+F L+ENV + V F + ++ + L L++M YQ G++ AG YG+ Q R R + A P
Sbjct: 1156 RFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAP 1215
Query: 629 TEKLPPYALPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPS 682
EKLP + P H R V +F N G R + ++D +SDLP
Sbjct: 1216 GEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPE 1271
Query: 683 VDNYESRDEIPYDREPETEFQCFIR 707
V N S EI Y+ EP++ FQ +R
Sbjct: 1272 VRNGASALEISYNGEPQSWFQRQLR 1296
Score = 45.8 bits (107), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 11/83 (13%)
Query: 326 ANECEVGEPQKMDVKL-----LDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQ 380
+ CE EP+ +++KL LD++SGCG +S G + AG++ T WA+++ + A Q
Sbjct: 1017 SQACEPSEPE-IEIKLPKLRTLDVFSGCGGLSEGF----HQAGIS-DTLWAIEMWDPAAQ 1070
Query: 381 SLKLNHPETEVRNESAEDFLTLL 403
+ +LN+P + V E L L+
Sbjct: 1071 AFRLNNPGSTVFTEDCNILLKLV 1093
>gi|168277642|dbj|BAG10799.1| DNA (cytosine-5)-methyltransferase 1 [synthetic construct]
Length = 1498
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 74/205 (36%), Positives = 110/205 (53%), Gaps = 12/205 (5%)
Query: 509 THGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKP 568
T + + LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P
Sbjct: 1082 TTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRP 1139
Query: 569 KFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQP 628
+F L+ENV + V F + ++ + L L++M YQ G++ AG YG+ Q R R + A P
Sbjct: 1140 RFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAP 1199
Query: 629 TEKLPPYALPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPS 682
EKLP + P H R V +F N G R + ++D +SDLP
Sbjct: 1200 GEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPE 1255
Query: 683 VDNYESRDEIPYDREPETEFQCFIR 707
V N S EI Y+ EP++ FQ +R
Sbjct: 1256 VRNGASALEISYNGEPQSWFQRQLR 1280
Score = 45.8 bits (107), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 11/83 (13%)
Query: 326 ANECEVGEPQKMDVKL-----LDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQ 380
+ CE EP+ +++KL LD++SGCG +S G + AG++ T WA+++ + A Q
Sbjct: 1001 SQACEPSEPE-IEIKLPKLRTLDVFSGCGGLSEGF----HQAGIS-DTLWAIEMWDPAAQ 1054
Query: 381 SLKLNHPETEVRNESAEDFLTLL 403
+ +LN+P + V E L L+
Sbjct: 1055 AFRLNNPGSTVFTEDCNILLKLV 1077
>gi|119604485|gb|EAW84079.1| DNA (cytosine-5-)-methyltransferase 1, isoform CRA_a [Homo sapiens]
gi|119604486|gb|EAW84080.1| DNA (cytosine-5-)-methyltransferase 1, isoform CRA_a [Homo sapiens]
Length = 1678
Score = 135 bits (341), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 74/205 (36%), Positives = 110/205 (53%), Gaps = 12/205 (5%)
Query: 509 THGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKP 568
T + + LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P
Sbjct: 1265 TTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRP 1322
Query: 569 KFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQP 628
+F L+ENV + V F + ++ + L L++M YQ G++ AG YG+ Q R R + A P
Sbjct: 1323 RFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAP 1382
Query: 629 TEKLPPYALPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPS 682
EKLP + P H R V +F N G R + ++D +SDLP
Sbjct: 1383 GEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPE 1438
Query: 683 VDNYESRDEIPYDREPETEFQCFIR 707
V N S EI Y+ EP++ FQ +R
Sbjct: 1439 VRNGASALEISYNGEPQSWFQRQLR 1463
Score = 45.8 bits (107), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 11/83 (13%)
Query: 326 ANECEVGEPQKMDVKL-----LDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQ 380
+ CE EP+ +++KL LD++SGCG +S G + AG++ T WA+++ + A Q
Sbjct: 1184 SQACEPSEPE-IEIKLPKLRTLDVFSGCGGLSEGF----HQAGIS-DTLWAIEMWDPAAQ 1237
Query: 381 SLKLNHPETEVRNESAEDFLTLL 403
+ +LN+P + V E L L+
Sbjct: 1238 AFRLNNPGSTVFTEDCNILLKLV 1260
>gi|114675304|ref|XP_001163764.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 isoform 10 [Pan
troglodytes]
Length = 1678
Score = 135 bits (341), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 74/205 (36%), Positives = 110/205 (53%), Gaps = 12/205 (5%)
Query: 509 THGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKP 568
T + + LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P
Sbjct: 1265 TTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRP 1322
Query: 569 KFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQP 628
+F L+ENV + V F + ++ + L L++M YQ G++ AG YG+ Q R R + A P
Sbjct: 1323 RFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAP 1382
Query: 629 TEKLPPYALPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPS 682
EKLP + P H R V +F N G R + ++D +SDLP
Sbjct: 1383 GEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPE 1438
Query: 683 VDNYESRDEIPYDREPETEFQCFIR 707
V N S EI Y+ EP++ FQ +R
Sbjct: 1439 VRNGASALEISYNGEPQSWFQRQLR 1463
Score = 45.8 bits (107), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 11/83 (13%)
Query: 326 ANECEVGEPQKMDVKL-----LDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQ 380
+ CE EP+ +++KL LD++SGCG +S G + AG++ T WA+++ + A Q
Sbjct: 1184 SQACEPSEPE-IEIKLPKLRTLDVFSGCGGLSEGF----HQAGIS-DTLWAIEMWDPAAQ 1237
Query: 381 SLKLNHPETEVRNESAEDFLTLL 403
+ +LN+P + V E L L+
Sbjct: 1238 AFRLNNPGSTVFTEDCNILLKLV 1260
>gi|397476607|ref|XP_003809690.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Pan paniscus]
Length = 1631
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 74/205 (36%), Positives = 110/205 (53%), Gaps = 12/205 (5%)
Query: 509 THGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKP 568
T + + LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P
Sbjct: 1218 TTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRP 1275
Query: 569 KFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQP 628
+F L+ENV + V F + ++ + L L++M YQ G++ AG YG+ Q R R + A P
Sbjct: 1276 RFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAP 1335
Query: 629 TEKLPPYALPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPS 682
EKLP + P H R V +F N G R + ++D +SDLP
Sbjct: 1336 GEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPE 1391
Query: 683 VDNYESRDEIPYDREPETEFQCFIR 707
V N S EI Y+ EP++ FQ +R
Sbjct: 1392 VRNGASALEISYNGEPQSWFQRQLR 1416
Score = 45.8 bits (107), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 11/83 (13%)
Query: 326 ANECEVGEPQKMDVKL-----LDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQ 380
+ CE EP+ +++KL LD++SGCG +S G + AG++ T WA+++ + A Q
Sbjct: 1137 SQACEPSEPE-IEIKLPKLRTLDVFSGCGGLSEGF----HQAGIS-DTLWAIEMWDPAAQ 1190
Query: 381 SLKLNHPETEVRNESAEDFLTLL 403
+ +LN+P + V E L L+
Sbjct: 1191 AFRLNNPGSTVFTEDCNILLKLV 1213
>gi|417414438|gb|JAA53513.1| Putative translation initiation factor 5b eif-5b, partial [Desmodus
rotundus]
Length = 1581
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 109/201 (54%), Gaps = 12/201 (5%)
Query: 513 KSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVL 572
+ + LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P++ L
Sbjct: 1204 RGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRPRYFL 1261
Query: 573 MENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKL 632
+ENV + V F + ++ + L L++M YQ G++ AG YG+ Q R R + A P EKL
Sbjct: 1262 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKL 1321
Query: 633 PPYALPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNY 686
P + P H R V +F N G R + ++D +SDLP + N
Sbjct: 1322 PLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEIRNG 1377
Query: 687 ESRDEIPYDREPETEFQCFIR 707
S EI Y+ EP++ FQ +R
Sbjct: 1378 ASAQEISYNGEPQSWFQRQLR 1398
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 12/111 (10%)
Query: 300 STFFSLPPENKR---VSSETSSTISSDVDANECEVGEP----QKMDVKLLDLYSGCGAMS 352
S F PP + R + + V + CE EP Q ++ LD++SGCG +S
Sbjct: 1090 SKSFEDPPNHARSPGNKGKGKGKGKARVKSQPCEPSEPKAEIQLRKLRTLDVFSGCGGLS 1149
Query: 353 TGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLL 403
G + AG++ T WAV++ + A Q+ +LN+P + V E L L+
Sbjct: 1150 EGF----HQAGIS-ETLWAVEMWDPAAQAFRLNNPGSTVFTEDCNVLLKLV 1195
>gi|383416291|gb|AFH31359.1| DNA (cytosine-5)-methyltransferase 1 isoform b [Macaca mulatta]
Length = 1619
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 73/201 (36%), Positives = 109/201 (54%), Gaps = 12/201 (5%)
Query: 513 KSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVL 572
+ + LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P+F L
Sbjct: 1207 RGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRPRFFL 1264
Query: 573 MENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKL 632
+ENV + V F + ++ + L L++M YQ G++ AG YG+ Q R R + A P EKL
Sbjct: 1265 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKL 1324
Query: 633 PPYALPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNY 686
P + P H R V +F N G R + ++D +SDLP V N
Sbjct: 1325 PLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEVRNG 1380
Query: 687 ESRDEIPYDREPETEFQCFIR 707
S EI Y+ EP++ FQ +R
Sbjct: 1381 ASALEISYNGEPQSWFQRQLR 1401
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 11/83 (13%)
Query: 326 ANECEVGEPQKMDVKL-----LDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQ 380
+ CE EP+ M++KL LD++SGCG +S G + AG++ T WA+++ + A Q
Sbjct: 1122 SQACEPSEPE-MEIKLPKLRTLDVFSGCGGLSEGF----HQAGIS-DTLWAIEMWDPAAQ 1175
Query: 381 SLKLNHPETEVRNESAEDFLTLL 403
+ +LN+P + V E L L+
Sbjct: 1176 AFRLNNPGSTVFTEDCNILLKLV 1198
>gi|426387162|ref|XP_004060043.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Gorilla gorilla
gorilla]
Length = 1790
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 74/205 (36%), Positives = 110/205 (53%), Gaps = 12/205 (5%)
Query: 509 THGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKP 568
T + + LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P
Sbjct: 1377 TTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRP 1434
Query: 569 KFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQP 628
+F L+ENV + V F + ++ + L L++M YQ G++ AG YG+ Q R R + A P
Sbjct: 1435 RFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAP 1494
Query: 629 TEKLPPYALPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPS 682
EKLP + P H R V +F N G R + ++D +SDLP
Sbjct: 1495 GEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPE 1550
Query: 683 VDNYESRDEIPYDREPETEFQCFIR 707
V N S EI Y+ EP++ FQ +R
Sbjct: 1551 VRNGASALEISYNGEPQSWFQRQLR 1575
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 11/83 (13%)
Query: 326 ANECEVGEPQKMDVKL-----LDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQ 380
+ CE EP+ +++KL LD++SGCG +S G + AG++ T WA+++ + A Q
Sbjct: 1296 SQACEPSEPE-IEIKLPKLRTLDVFSGCGGLSEGF----HQAGIS-DTLWAIEMWDPAAQ 1349
Query: 381 SLKLNHPETEVRNESAEDFLTLL 403
+ +LN+P + V E L L+
Sbjct: 1350 AFRLNNPGSTVFTEDCNILLKLV 1372
>gi|332023953|gb|EGI64171.1| DNA (cytosine-5)-methyltransferase PliMCI [Acromyrmex echinatior]
Length = 1449
Score = 135 bits (340), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 109/201 (54%), Gaps = 4/201 (1%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP GDV+++CGGPPCQG SG NRF + L KN ++ F+ D+ +PKF +MENV
Sbjct: 1014 LPQKGDVELLCGGPPCQGFSGMNRFNLRQYSLF--KNSLIVTFLSYCDYYRPKFFVMENV 1071
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V K ++ + L LI+M YQ G++ AG+YG+PQ R R+ L A P E LP +
Sbjct: 1072 RNFVFCKKSMVLKLTLRCLIRMGYQCTFGILQAGSYGVPQTRRRMILLAAAPGEILPKFP 1131
Query: 637 LPTHDVVLRGVIPTEFERNTVAYDEGQQAELA--RKLLLQDAISDLPSVDNYESRDEIPY 694
+PTH R + Q E A R + ++DA+ DLP + + +E+ Y
Sbjct: 1132 IPTHVFSKRCCSLAVIVDSKRYITNCVQKESAPYRAITVKDALYDLPEIKCGSNIEEMSY 1191
Query: 695 DREPETEFQCFIRLRKDGKKL 715
EP T FQ +R + KL
Sbjct: 1192 VGEPITHFQRKMRGKPYQSKL 1212
Score = 39.3 bits (90), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 334 PQKMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRN 393
P+K+ ++LD+++GCG +S G+ L WA++ A + +LN+P+T V +
Sbjct: 939 PRKL--RMLDIFAGCGGLSEGMHQAGVAESL-----WAIEKESSAANAYRLNNPKTMVFS 991
Query: 394 ESAEDFLTLLREWEKL 409
E L + + +++
Sbjct: 992 EDCNKLLQRVMDGDRV 1007
>gi|345482937|ref|XP_001600175.2| PREDICTED: DNA (cytosine-5)-methyltransferase PliMCI [Nasonia
vitripennis]
Length = 1404
Score = 135 bits (340), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 107/190 (56%), Gaps = 6/190 (3%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP G+VD++CGGPPCQG SG NRF ++ + KN ++ F+ D+ KP+F LMENV
Sbjct: 1001 LPKKGEVDLLCGGPPCQGFSGMNRFNSR--AYSSFKNSLIVSFISFCDYYKPRFFLMENV 1058
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F K + + L+ L +M YQ G++ AG+YG+PQ R R+ L A P E LP +
Sbjct: 1059 RNFVSFKKSAVLKLTLSCLSRMGYQCTFGILQAGSYGIPQTRRRMILIAAAPGEILPRFP 1118
Query: 637 LPTHDVVLRGVIPTEFERNTVAY---DEGQQAELARKLLLQDAISDLPSVDNYESRDEIP 693
P H V + + + V Y + ++ R + + DA+SDLP + + + +
Sbjct: 1119 NPLH-VFSKSTCQLTVDVDNVKYFTFTDVHESAPYRAITVYDALSDLPKIKSGSNEVVMR 1177
Query: 694 YDREPETEFQ 703
Y+ +P T FQ
Sbjct: 1178 YENDPLTHFQ 1187
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 79/188 (42%), Gaps = 14/188 (7%)
Query: 222 YFTAQWYYRARDTVI-ESNAHLIDQRRVFFSEIQNDNPLECLVKKLNIARVP-LNIDLEA 279
Y T + YR +T ES D +++S+ + D L C+V K IA LN +E
Sbjct: 804 YVTVKKMYRPENTHRGESLKKKSDMNMLYWSDEECDVRLNCIVGKCYIAYSENLNQSIEE 863
Query: 280 KKLAIPHCDYYCDMM------YLLPYSTFFSLPPENKRVSSETSSTISSDVDANECEVGE 333
+ PH Y+ + Y P + S+ K+ S + + + V
Sbjct: 864 WSASGPHRFYFSEAYDLNNEEYTEPPAHACSVTKSFKKDVKAKSKSKKVETIIEDIPVSL 923
Query: 334 PQ-KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVR 392
PQ ++ LD+++GCG +S GL L WA++ + A + +LN+P+ V
Sbjct: 924 PQISHKLRTLDVFAGCGGLSEGLKQAGVAESL-----WAIENDTAAAHAYRLNNPKASVF 978
Query: 393 NESAEDFL 400
FL
Sbjct: 979 TTDCNSFL 986
>gi|321469202|gb|EFX80183.1| hypothetical protein DAPPUDRAFT_346987 [Daphnia pulex]
Length = 1400
Score = 135 bits (340), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 112/196 (57%), Gaps = 4/196 (2%)
Query: 514 SKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLM 573
++LP V+++CGGPPCQG SG NRF ++ + +N ++ ++ D+ +P+F ++
Sbjct: 994 GQVLPPKDGVELLCGGPPCQGFSGMNRFNSRQ--YSSFRNSLIVSYLSYCDYYRPRFFIL 1051
Query: 574 ENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLP 633
ENV + V F + ++ + + L++M YQ G++ AG YG+ Q R R F++ A P EKLP
Sbjct: 1052 ENVRNFVSFKRNMVLKLTMRCLVRMGYQCTFGVLQAGNYGVSQTRRRAFIFAAAPGEKLP 1111
Query: 634 PYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELA--RKLLLQDAISDLPSVDNYESRDE 691
Y PTH RG + Y + A R + ++DA+SDLP + N ++E
Sbjct: 1112 LYPEPTHVFSRRGCQLSVAVGRDKFYSNCRWLLSAPYRTVTVRDAMSDLPEIPNGAKQEE 1171
Query: 692 IPYDREPETEFQCFIR 707
I Y +P++ FQ ++R
Sbjct: 1172 ISYGGDPQSHFQRWMR 1187
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 5/69 (7%)
Query: 334 PQKMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRN 393
P+ +K LD+++GCG +S GL + +G+ T WA++ A Q+ +LN+P+ V
Sbjct: 921 PKIEPLKTLDIFAGCGGLSEGL----HQSGV-AKTYWAIECEPTAAQAFRLNNPDAAVFT 975
Query: 394 ESAEDFLTL 402
+ L +
Sbjct: 976 DDCNTILKM 984
>gi|383408753|gb|AFH27590.1| DNA (cytosine-5)-methyltransferase 1 isoform b [Macaca mulatta]
Length = 1616
Score = 135 bits (340), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 73/201 (36%), Positives = 109/201 (54%), Gaps = 12/201 (5%)
Query: 513 KSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVL 572
+ + LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P+F L
Sbjct: 1207 RGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRPRFFL 1264
Query: 573 MENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKL 632
+ENV + V F + ++ + L L++M YQ G++ AG YG+ Q R R + A P EKL
Sbjct: 1265 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKL 1324
Query: 633 PPYALPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNY 686
P + P H R V +F N G R + ++D +SDLP V N
Sbjct: 1325 PLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEVRNG 1380
Query: 687 ESRDEIPYDREPETEFQCFIR 707
S EI Y+ EP++ FQ +R
Sbjct: 1381 ASALEISYNGEPQSWFQRQLR 1401
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 11/83 (13%)
Query: 326 ANECEVGEPQKMDVKL-----LDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQ 380
+ CE EP+ M++KL LD++SGCG +S G + AG++ T WA+++ + A Q
Sbjct: 1122 SQACEPSEPE-MEIKLPKLRTLDVFSGCGGLSEGF----HQAGIS-DTLWAIEMWDPAAQ 1175
Query: 381 SLKLNHPETEVRNESAEDFLTLL 403
+ +LN+P + V E L L+
Sbjct: 1176 AFRLNNPGSTVFTEDCNILLKLV 1198
>gi|4160670|dbj|BAA37118.1| DNA cytosine 5 methyltransferase [Rattus rattus]
Length = 1622
Score = 135 bits (340), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 107/197 (54%), Gaps = 12/197 (6%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P+F L+ENV
Sbjct: 1216 LPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRPRFFLLENV 1273
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F + ++ + L L++M YQ G++ AG YG+ Q R R + A P EKLP +
Sbjct: 1274 RNSVSFRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFP 1333
Query: 637 LPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRD 690
P H R V +F N G R + ++D +SDLP + N S
Sbjct: 1334 EPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEIQNGASAP 1389
Query: 691 EIPYDREPETEFQCFIR 707
EI Y+ EP++ FQ +R
Sbjct: 1390 EISYNGEPQSWFQRQLR 1406
Score = 46.6 bits (109), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 12/108 (11%)
Query: 303 FSLPPENKRVSSETSSTISSDVDANECEVGEPQKMD-------VKLLDLYSGCGAMSTGL 355
F PP + R + +V EP++ + ++ LD++SGCG GL
Sbjct: 1101 FEDPPNHARSPGNKGKGKGKGKGKGKPQVSEPKEPEAAIKLPKLRTLDVFSGCG----GL 1156
Query: 356 CLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLL 403
G + AG++ T WA+++ E A Q+ +LN+P T V E L L+
Sbjct: 1157 TEGFHQAGIS-ETLWAIEMWEPAAQAFRLNNPGTTVFTEDCNVLLKLV 1203
>gi|343197726|pdb|3SWR|A Chain A, Structure Of Human Dnmt1 (601-1600) In Complex With
Sinefungin
Length = 1002
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 74/205 (36%), Positives = 110/205 (53%), Gaps = 12/205 (5%)
Query: 509 THGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKP 568
T + + LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P
Sbjct: 605 TTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRP 662
Query: 569 KFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQP 628
+F L+ENV + V F + ++ + L L++M YQ G++ AG YG+ Q R R + A P
Sbjct: 663 RFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAP 722
Query: 629 TEKLPPYALPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPS 682
EKLP + P H R V +F N G R + ++D +SDLP
Sbjct: 723 GEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPE 778
Query: 683 VDNYESRDEIPYDREPETEFQCFIR 707
V N S EI Y+ EP++ FQ +R
Sbjct: 779 VRNGASALEISYNGEPQSWFQRQLR 803
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 11/83 (13%)
Query: 326 ANECEVGEPQKMDVKL-----LDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQ 380
+ CE EP+ +++KL LD++SGCG +S G + AG++ T WA+++ + A Q
Sbjct: 524 SQACEPSEPE-IEIKLPKLRTLDVFSGCGGLSEGF----HQAGIS-DTLWAIEMWDPAAQ 577
Query: 381 SLKLNHPETEVRNESAEDFLTLL 403
+ +LN+P + V E L L+
Sbjct: 578 AFRLNNPGSTVFTEDCNILLKLV 600
>gi|291238124|ref|XP_002738981.1| PREDICTED: DNA (cytosine-5-)-methyltransferase [Saccoglossus
kowalevskii]
Length = 1294
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 107/194 (55%), Gaps = 6/194 (3%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP G V+++CGGPPCQG SG NRF +++ + KN ++ ++ D+ +PKF L+ENV
Sbjct: 896 LPQKGQVELLCGGPPCQGFSGMNRFNSRE--YSKFKNSLVVSYLSYCDYYRPKFFLLENV 953
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F K ++ + + L+ M YQ G++ AG YG+ Q R R + A P EKLP Y
Sbjct: 954 RNFVSFKKSMVLKLTMRSLLSMGYQCTFGVVQAGLYGVAQTRRRAIILAAAPGEKLPFYP 1013
Query: 637 LPTHDVVLRGVIPTEFERNTVAYDEGQQAELA---RKLLLQDAISDLPSVDNYESRDEIP 693
P H R P + Y+ + R + ++DA+SDLP + N ++ E+
Sbjct: 1014 EPAHVFSPRAC-PLSVTIDEKKYESNMARVWSAPYRTITVRDALSDLPEIRNGYNKLEMS 1072
Query: 694 YDREPETEFQCFIR 707
YDRE + +Q IR
Sbjct: 1073 YDREAQNGYQKAIR 1086
>gi|297276085|ref|XP_001104704.2| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Macaca mulatta]
Length = 1280
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/205 (36%), Positives = 110/205 (53%), Gaps = 12/205 (5%)
Query: 509 THGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKP 568
T + + LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P
Sbjct: 867 TTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRP 924
Query: 569 KFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQP 628
+F L+ENV + V F + ++ + L L++M YQ G++ AG YG+ Q R R + A P
Sbjct: 925 RFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAP 984
Query: 629 TEKLPPYALPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPS 682
EKLP + P H R V +F N G R + ++D +SDLP
Sbjct: 985 GEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPE 1040
Query: 683 VDNYESRDEIPYDREPETEFQCFIR 707
V N S EI Y+ EP++ FQ +R
Sbjct: 1041 VRNGASALEISYNGEPQSWFQRQLR 1065
Score = 47.4 bits (111), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 11/87 (12%)
Query: 326 ANECEVGEPQKMDVKL-----LDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQ 380
+ CE EP+ M++KL LD++SGCG +S G + AG++ T WA+++ + A Q
Sbjct: 786 SQACEPSEPE-MEIKLPKLRTLDVFSGCGGLSEGF----HQAGIS-DTLWAIEMWDPAAQ 839
Query: 381 SLKLNHPETEVRNESAEDFLTLLREWE 407
+ +LN+P + V E L L+ E
Sbjct: 840 AFRLNNPGSTVFTEDCNILLKLVMAGE 866
>gi|6684525|gb|AAF23609.1| DNA (cytosine-5)-methyltransferase [Homo sapiens]
Length = 1280
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/205 (36%), Positives = 110/205 (53%), Gaps = 12/205 (5%)
Query: 509 THGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKP 568
T + + LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P
Sbjct: 867 TTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRP 924
Query: 569 KFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQP 628
+F L+ENV + V F + ++ + L L++M YQ G++ AG YG+ Q R R + A P
Sbjct: 925 RFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAP 984
Query: 629 TEKLPPYALPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPS 682
EKLP + P H R V +F N G R + ++D +SDLP
Sbjct: 985 GEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPE 1040
Query: 683 VDNYESRDEIPYDREPETEFQCFIR 707
V N S EI Y+ EP++ FQ +R
Sbjct: 1041 VRNGASALEISYNGEPQSWFQRQLR 1065
Score = 45.4 bits (106), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 11/87 (12%)
Query: 326 ANECEVGEPQKMDVKL-----LDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQ 380
+ CE EP+ +++KL LD++SGCG +S G + AG++ T WA+++ + A Q
Sbjct: 786 SQACEPSEPE-IEIKLPKLRTLDVFSGCGGLSEGF----HQAGIS-DTLWAIEMWDPAAQ 839
Query: 381 SLKLNHPETEVRNESAEDFLTLLREWE 407
+ +LN+P + V E L L+ E
Sbjct: 840 AFRLNNPGSTVFTEDCNILLKLVMAGE 866
>gi|283549178|ref|NP_001164522.1| DNA methyltransferase 1a [Apis mellifera]
Length = 1366
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 104/189 (55%), Gaps = 4/189 (2%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP G V+++CGGPPCQG SG NRF ++ L KN ++ ++ D+ +P F +MENV
Sbjct: 967 LPQKGQVELLCGGPPCQGFSGMNRFNSRQYSLF--KNSLVVSYLSYCDYYRPNFFIMENV 1024
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F + ++ + L LI+M YQ G++ AG YG+PQ R R+ + A P + LP Y
Sbjct: 1025 RNFVSFKRSMVLKLTLRCLIRMGYQCTFGILQAGNYGIPQTRRRMIILAAAPGQMLPKYP 1084
Query: 637 LPTHDVVLRGVIPTEFERNTVAYDEGQQAELA--RKLLLQDAISDLPSVDNYESRDEIPY 694
P+H R + N + A R + ++DA+ DLP + N +++E+ Y
Sbjct: 1085 EPSHVFSKRACQLSVLVDNKKYSSNCNWIDSAPFRTISVKDAMFDLPEIKNGWNKEEMSY 1144
Query: 695 DREPETEFQ 703
EP T FQ
Sbjct: 1145 TNEPTTHFQ 1153
>gi|395851079|ref|XP_003798094.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Otolemur garnettii]
Length = 1620
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/201 (35%), Positives = 109/201 (54%), Gaps = 12/201 (5%)
Query: 513 KSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVL 572
+ + LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P+F L
Sbjct: 1211 RGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRPRFFL 1268
Query: 573 MENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKL 632
+ENV + V F + ++ + L L++M YQ G++ AG YG+ Q R R + A P EKL
Sbjct: 1269 LENVRNFVSFKRSMVLKLTLCCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKL 1328
Query: 633 PPYALPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNY 686
P + P H R V +F N G R + ++D +SDLP + N
Sbjct: 1329 PLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEIRNG 1384
Query: 687 ESRDEIPYDREPETEFQCFIR 707
S EI Y+ EP++ FQ +R
Sbjct: 1385 ASALEILYNGEPQSWFQRQLR 1405
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 11/83 (13%)
Query: 326 ANECEVGEPQKMDVKL-----LDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQ 380
+ CE EP+ ++KL LD++SGCG +S G + AG++ T WA+++ + A Q
Sbjct: 1126 SQTCEPSEPE-TEIKLPKLRTLDVFSGCGGLSEGF----HQAGVS-ETLWAIEMWDPAAQ 1179
Query: 381 SLKLNHPETEVRNESAEDFLTLL 403
+ +LN+P + V E L L+
Sbjct: 1180 AFRLNNPGSTVFTEDCNVLLKLV 1202
>gi|327284227|ref|XP_003226840.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Anolis
carolinensis]
Length = 1553
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 107/197 (54%), Gaps = 12/197 (6%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P+F L+ENV
Sbjct: 1148 LPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRPRFFLLENV 1205
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F + ++ + L L++M YQ G++ AG YG+ Q R R + A P EKLP +
Sbjct: 1206 RNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIVLAAAPGEKLPMFP 1265
Query: 637 LPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRD 690
P H R V +F N G R + ++D +SDLP + N S
Sbjct: 1266 EPLHVFAPRACQLSVVVDDKKFVSNITRTYSGP----FRTITVRDTMSDLPEIRNGASAL 1321
Query: 691 EIPYDREPETEFQCFIR 707
EI Y+ EP++ FQ IR
Sbjct: 1322 EISYNGEPQSWFQRQIR 1338
Score = 43.1 bits (100), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 53/99 (53%), Gaps = 9/99 (9%)
Query: 325 DANECEVGEPQKMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKL 384
+ +E E + + ++ LD++SGCG +S G + A ++ T WA+++ E A Q+ +L
Sbjct: 1062 EHSEHEAAKMKPPKLRSLDVFSGCGGLSEGF----HQAEVS-ETLWAIEMWEPAAQAFRL 1116
Query: 385 NHPETEVRNESAEDFLTLLREWEKLCISFSLIARKDPQQ 423
N+P T V E L L+ EK + + +K PQ+
Sbjct: 1117 NNPGTTVFTEDCNVLLKLVMSGEKT----NSLGQKLPQK 1151
>gi|156365066|ref|XP_001626663.1| predicted protein [Nematostella vectensis]
gi|156213548|gb|EDO34563.1| predicted protein [Nematostella vectensis]
Length = 1263
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 107/193 (55%), Gaps = 4/193 (2%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
+P G+V+++CGGPPCQG SG NRF ++ L KN ++ ++ DF +P+F ++ENV
Sbjct: 861 IPQRGEVELLCGGPPCQGFSGMNRFNTREYSLF--KNSLVVSYLSYCDFYRPRFFILENV 918
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F K ++ + L L++M YQ G++ AG YG+PQ R R + A P E+LP Y
Sbjct: 919 RNFVSFKKSMVLKLTLRCLLRMGYQCTFGVLQAGCYGVPQTRRRAIIMAAAPGEELPLYP 978
Query: 637 LPTHDVVLRGVIPTEF--ERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPY 694
PTH R T E+ + + R + ++DA+SDLP + N S E Y
Sbjct: 979 EPTHCFSPRTCQLTVMVDEKKFTSNITRTASAPYRTITVRDAMSDLPEIRNGASAAESSY 1038
Query: 695 DREPETEFQCFIR 707
+ E + FQ IR
Sbjct: 1039 EGEAISHFQRQIR 1051
Score = 39.7 bits (91), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 5/69 (7%)
Query: 339 VKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAED 398
++ LD+++GCG +S GL + AG+ + WA++ E A Q+ +LN+P V +
Sbjct: 789 LRSLDVFAGCGGLSEGL----HQAGV-AESLWAIEKEEPAAQAYRLNNPGCTVFTDDCNT 843
Query: 399 FLTLLREWE 407
L L E E
Sbjct: 844 LLKLAMEGE 852
>gi|74136491|ref|NP_001028141.1| DNA (cytosine-5)-methyltransferase 1 [Monodelphis domestica]
gi|22023943|gb|AAM89258.1|AF527541_1 cytosine-5-methyltransferase [Monodelphis domestica]
Length = 1514
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 108/193 (55%), Gaps = 4/193 (2%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P+F L+ENV
Sbjct: 1109 LPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRPRFFLLENV 1166
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F + ++ + L L++M YQ G++ AG YG+ Q R R + A P EKLP +
Sbjct: 1167 RNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPMFP 1226
Query: 637 LPTHDVVLRGVIPTEF--ERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPY 694
P H R + ++ V+ + R + ++D +SDLP + N S EI Y
Sbjct: 1227 EPLHVFAPRACQLSVVVDDKKFVSNITRMNSAPFRTITVRDTMSDLPEIRNGASALEISY 1286
Query: 695 DREPETEFQCFIR 707
+ EP++ FQ IR
Sbjct: 1287 NGEPQSWFQRQIR 1299
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 55/100 (55%), Gaps = 9/100 (9%)
Query: 324 VDANECEVGEPQKMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLK 383
V+ +E E E + ++ LD++SGCG +S G + AG++ T WA+++ E A Q+ +
Sbjct: 1022 VEPSEHETIEVKPPKLRTLDVFSGCGGLSEGF----HQAGIS-ETLWAIEMWEPAAQAFR 1076
Query: 384 LNHPETEVRNESAEDFLTLLREWEKLCISFSLIARKDPQQ 423
LN+P T V E L L+ EK + + +K PQ+
Sbjct: 1077 LNNPGTTVFTEDCNVLLKLVMSGEKT----NSLGQKLPQK 1112
>gi|315583650|pdb|3PTA|A Chain A, Crystal Structure Of Human Dnmt1(646-1600) In Complex With
Dna
Length = 956
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/205 (36%), Positives = 110/205 (53%), Gaps = 12/205 (5%)
Query: 509 THGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKP 568
T + + LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P
Sbjct: 559 TTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRP 616
Query: 569 KFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQP 628
+F L+ENV + V F + ++ + L L++M YQ G++ AG YG+ Q R R + A P
Sbjct: 617 RFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAP 676
Query: 629 TEKLPPYALPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPS 682
EKLP + P H R V +F N G R + ++D +SDLP
Sbjct: 677 GEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPE 732
Query: 683 VDNYESRDEIPYDREPETEFQCFIR 707
V N S EI Y+ EP++ FQ +R
Sbjct: 733 VRNGASALEISYNGEPQSWFQRQLR 757
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 11/87 (12%)
Query: 326 ANECEVGEPQKMDVKL-----LDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQ 380
+ CE EP+ +++KL LD++SGCG +S G + AG++ T WA+++ + A Q
Sbjct: 478 SQACEPSEPE-IEIKLPKLRTLDVFSGCGGLSEGF----HQAGIS-DTLWAIEMWDPAAQ 531
Query: 381 SLKLNHPETEVRNESAEDFLTLLREWE 407
+ +LN+P + V E L L+ E
Sbjct: 532 AFRLNNPGSTVFTEDCNILLKLVMAGE 558
>gi|444525514|gb|ELV14061.1| DNA (cytosine-5)-methyltransferase 1 [Tupaia chinensis]
Length = 1472
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 110/205 (53%), Gaps = 12/205 (5%)
Query: 509 THGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKP 568
T + + LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P
Sbjct: 1012 TANARGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRP 1069
Query: 569 KFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQP 628
+F L+ENV + V F + ++ + L L++M YQ G++ AG YG+ Q R R + A P
Sbjct: 1070 RFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAP 1129
Query: 629 TEKLPPYALPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPS 682
EKLP + P H R V +F N G R + ++D +SDLP
Sbjct: 1130 GEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPE 1185
Query: 683 VDNYESRDEIPYDREPETEFQCFIR 707
+ N S EI Y+ EP++ FQ +R
Sbjct: 1186 IRNGASALEISYNGEPQSWFQRQLR 1210
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 8/80 (10%)
Query: 328 ECEVGEPQKMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHP 387
E E+ P+ ++ LD++SGCG +S G + AG++ T WA+++ + A Q+ +LN+P
Sbjct: 940 EAEIKLPK---LRTLDVFSGCGGLSEGF----HQAGIS-ETLWAIEMWDPAAQAFRLNNP 991
Query: 388 ETEVRNESAEDFLTLLREWE 407
T V E L L+ E
Sbjct: 992 GTAVFTEDCNVLLKLVMAGE 1011
>gi|395512631|ref|XP_003760539.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Sarcophilus
harrisii]
Length = 1486
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 108/193 (55%), Gaps = 4/193 (2%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P+F L+ENV
Sbjct: 1081 LPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRPRFFLLENV 1138
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F + ++ + L L++M YQ G++ AG YG+ Q R R + A P EKLP +
Sbjct: 1139 RNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPMFP 1198
Query: 637 LPTHDVVLRGVIPTEF--ERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPY 694
P H R + ++ V+ + R + ++D +SDLP + N S EI Y
Sbjct: 1199 EPLHVFAPRACQLSVVVDDKKFVSNITRMNSAPFRTITVRDTMSDLPEIRNGASALEISY 1258
Query: 695 DREPETEFQCFIR 707
+ EP++ FQ IR
Sbjct: 1259 NGEPQSWFQRQIR 1271
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 55/100 (55%), Gaps = 9/100 (9%)
Query: 324 VDANECEVGEPQKMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLK 383
V+ +E E E + ++ LD++SGCG +S G + AG++ T WA+++ E A Q+ +
Sbjct: 994 VEPSEQETIEVKLPKLRTLDVFSGCGGLSEGF----HQAGIS-ETLWAIEMWEPAAQAFR 1048
Query: 384 LNHPETEVRNESAEDFLTLLREWEKLCISFSLIARKDPQQ 423
LN+P T V E L L+ EK + + +K PQ+
Sbjct: 1049 LNNPGTTVFTEDCNVLLKLVMSGEKT----NSLGQKLPQK 1084
>gi|405957557|gb|EKC23761.1| DNA (cytosine-5)-methyltransferase 1, partial [Crassostrea gigas]
Length = 993
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 110/202 (54%), Gaps = 15/202 (7%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP GDV+++CGGPPCQG SG NRF +++ + KN + ++ D+ +P+F L+ENV
Sbjct: 796 LPQKGDVELLCGGPPCQGFSGMNRFNSRE--YSRFKNSLIASYLSYCDYYRPRFFLLENV 853
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F + ++ + AL L M YQ G++ AG+YG+PQ R R + A P EKLP +
Sbjct: 854 RNFVSFKRSMVLKLALRCLTTMGYQCTFGVLQAGSYGVPQTRRRAIILAAAPGEKLPFFP 913
Query: 637 LPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRD 690
P H R V +F N ++ R + ++D +SDLP + N +
Sbjct: 914 EPQHVFAPRAMQLSVQVDDKKFMSNITR----MESAPFRTITVRDTMSDLPEIRNGAKAE 969
Query: 691 EIPYDREPETEFQCFIRLRKDG 712
EI Y +P++ FQ R+R G
Sbjct: 970 EISYQGDPQSHFQ---RIRLSG 988
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 53/117 (45%), Gaps = 13/117 (11%)
Query: 300 STFFSLPPENKRVSSETSSTISSDVD-----ANECEVGEPQK---MDVKLLDLYSGCGAM 351
+ F PP RVS + E E EP+K ++ LD+++GCG +
Sbjct: 677 TKMFEEPPRQARVSGGKGKGKGKGKGKSSGPSAEEETTEPKKPTYRRLRTLDVFAGCGGI 736
Query: 352 STGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWEK 408
S G + AG+ + WA++ E A Q+ +LN+P V + L L+ E EK
Sbjct: 737 SEGF----HQAGI-AESCWAIEKEEPAGQAFRLNNPGCTVFTDDCNVLLKLVMEGEK 788
>gi|224613538|gb|ACN60348.1| DNA [Salmo salar]
Length = 466
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 108/197 (54%), Gaps = 12/197 (6%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP GDV+++CGGPPCQG SG NRF ++ + KN ++ ++ D+ +PKF L+ENV
Sbjct: 50 LPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSYLSYCDYYRPKFFLLENV 107
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F ++ + L L++M YQ G++ AG YG+ Q R R + A P EKLP Y
Sbjct: 108 RNFVSFKSSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPRYP 167
Query: 637 LPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRD 690
P H R V ++ N + G + R + ++D +SDLP + N S
Sbjct: 168 EPLHVFAPRACSLNVVVDDKKYFSNVTRGNGG----VYRTITVRDTMSDLPEIRNGASAL 223
Query: 691 EIPYDREPETEFQCFIR 707
EI Y+ EP++ FQ IR
Sbjct: 224 EISYNGEPQSWFQRQIR 240
>gi|193783730|dbj|BAG53712.1| unnamed protein product [Homo sapiens]
Length = 540
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/201 (36%), Positives = 109/201 (54%), Gaps = 12/201 (5%)
Query: 513 KSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVL 572
+ + LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P+F L
Sbjct: 131 RGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRPRFFL 188
Query: 573 MENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKL 632
+ENV + V F + ++ + L L++M YQ G++ AG YG+ Q R R + A P EKL
Sbjct: 189 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKL 248
Query: 633 PPYALPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNY 686
P + P H R V +F N G R + ++D +SDLP V N
Sbjct: 249 PLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEVRNG 304
Query: 687 ESRDEIPYDREPETEFQCFIR 707
S EI Y+ EP++ FQ +R
Sbjct: 305 ASALEISYNGEPQSWFQRQLR 325
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 11/87 (12%)
Query: 326 ANECEVGEPQKMDVKL-----LDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQ 380
+ CE EP+ +++KL LD++SGCG +S G + AG++ T WA+++ + A Q
Sbjct: 46 SQACEPSEPE-IEIKLPKLRTLDVFSGCGGLSEGF----HQAGIS-DTLWAIEMWDPAAQ 99
Query: 381 SLKLNHPETEVRNESAEDFLTLLREWE 407
+ +LN+P + V E L L+ E
Sbjct: 100 AFRLNNPGSTVFTEDCNILLKLVMAGE 126
>gi|338727207|ref|XP_001916472.2| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase
1-like [Equus caballus]
Length = 1619
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/201 (35%), Positives = 109/201 (54%), Gaps = 12/201 (5%)
Query: 513 KSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVL 572
+ + LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P++ L
Sbjct: 1210 RGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRPRYFL 1267
Query: 573 MENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKL 632
+ENV + V F + ++ + L L++M YQ G++ AG YG+ Q R R + A P EKL
Sbjct: 1268 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKL 1327
Query: 633 PPYALPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNY 686
P + P H R V +F N G R + ++D +SDLP V N
Sbjct: 1328 PLFPEPLHVFAPRACQLSVVVDDRKFVSNITRLSSGP----FRTITVRDTMSDLPEVRNG 1383
Query: 687 ESRDEIPYDREPETEFQCFIR 707
S EI Y+ EP++ FQ +R
Sbjct: 1384 ASALEISYNGEPQSWFQRQLR 1404
Score = 46.2 bits (108), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 11/80 (13%)
Query: 329 CEVGEPQKMDVKL-----LDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLK 383
CE EP K ++KL LD++SGCG +S G + AG++ T WA+++ + A Q+ +
Sbjct: 1128 CEPSEP-KAEIKLPKLRTLDVFSGCGGLSEGF----HQAGIS-ETLWAIEMWDPAAQAFR 1181
Query: 384 LNHPETEVRNESAEDFLTLL 403
LN+P + V E L L+
Sbjct: 1182 LNNPGSTVFTEDCNVLLKLV 1201
>gi|46048774|ref|NP_996835.1| DNA (cytosine-5)-methyltransferase 1 [Gallus gallus]
gi|12230343|sp|Q92072.1|DNMT1_CHICK RecName: Full=DNA (cytosine-5)-methyltransferase 1; Short=Dnmt1;
AltName: Full=DNA methyltransferase GgaI; Short=DNA MTase
GgaI; Short=M.GgaI; AltName: Full=MCMT
gi|1109610|dbj|BAA07867.1| DNA (cytosine-5-)-methyltransferase [Gallus gallus]
gi|1096715|prf||2112268A DNA methyltransferase
Length = 1537
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 107/197 (54%), Gaps = 12/197 (6%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P+F L+ENV
Sbjct: 1126 LPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRPRFFLLENV 1183
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F + ++ + L L++M YQ G++ AG YG+ Q R R + A P EKLP +
Sbjct: 1184 RNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIVLAAAPGEKLPMFP 1243
Query: 637 LPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRD 690
P H R V +F N G R + ++D +SDLP + N S
Sbjct: 1244 EPLHVFAPRACQLSVVVDDKKFVSNITRTYSGP----FRTITVRDTMSDLPEIRNGASAL 1299
Query: 691 EIPYDREPETEFQCFIR 707
EI Y+ EP++ FQ IR
Sbjct: 1300 EISYNGEPQSWFQRQIR 1316
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 14/100 (14%)
Query: 329 CEVGEPQKMDVKL-----LDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLK 383
CE EP+ ++KL LD++SGCG +S G + AG++ T WA+++ E A Q+ +
Sbjct: 1039 CEQSEPEPTELKLPKLRTLDVFSGCGGLSEGF----HQAGVS-ETLWAIEMWEPAAQAFR 1093
Query: 384 LNHPETEVRNESAEDFLTLLREWEKLCISFSLIARKDPQQ 423
LN+P T V E L L+ EK + + +K PQ+
Sbjct: 1094 LNNPGTTVFTEDCNVLLKLVMSGEKT----NSLGQKLPQK 1129
>gi|283462212|gb|ADB22400.1| DNA (cytosine-5-)-methyltransferase [Saccoglossus kowalevskii]
Length = 820
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 107/194 (55%), Gaps = 6/194 (3%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP G V+++CGGPPCQG SG NRF +++ + KN ++ ++ D+ +PKF L+ENV
Sbjct: 422 LPQKGQVELLCGGPPCQGFSGMNRFNSRE--YSKFKNSLVVSYLSYCDYYRPKFFLLENV 479
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F K ++ + + L+ M YQ G++ AG YG+ Q R R + A P EKLP Y
Sbjct: 480 RNFVSFKKSMVLKLTMRSLLSMGYQCTFGVVQAGLYGVAQTRRRAIILAAAPGEKLPFYP 539
Query: 637 LPTHDVVLRGVIPTEFERNTVAYDEGQQAELA---RKLLLQDAISDLPSVDNYESRDEIP 693
P H R P + Y+ + R + ++DA+SDLP + N ++ E+
Sbjct: 540 EPAHVFSPRAC-PLSVTIDEKKYESNMARVWSAPYRTITVRDALSDLPEIRNGYNKLEMS 598
Query: 694 YDREPETEFQCFIR 707
YDRE + +Q IR
Sbjct: 599 YDREAQNGYQKAIR 612
>gi|281337410|gb|EFB12994.1| hypothetical protein PANDA_010327 [Ailuropoda melanoleuca]
Length = 1576
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/201 (35%), Positives = 109/201 (54%), Gaps = 12/201 (5%)
Query: 513 KSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVL 572
+ + LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P++ L
Sbjct: 1167 RGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRPRYFL 1224
Query: 573 MENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKL 632
+ENV + V F + ++ + L L++M YQ G++ AG YG+ Q R R + A P EKL
Sbjct: 1225 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKL 1284
Query: 633 PPYALPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNY 686
P + P H R V +F N G R + ++D +SDLP V N
Sbjct: 1285 PLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEVRNG 1340
Query: 687 ESRDEIPYDREPETEFQCFIR 707
S EI Y+ EP++ FQ +R
Sbjct: 1341 ASALEILYNGEPQSWFQRQLR 1361
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 11/83 (13%)
Query: 326 ANECEVGEPQKMDVKL-----LDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQ 380
+ CE EP+ ++KL LD++SGCG +S G + AG++ T WA+++ + A Q
Sbjct: 1082 SQTCEPSEPE-AEIKLPKLRTLDVFSGCGGLSEGF----HQAGIS-ETLWAIEMWDPAAQ 1135
Query: 381 SLKLNHPETEVRNESAEDFLTLL 403
+ +LN+P + V E L L+
Sbjct: 1136 AFRLNNPGSTVFTEDCNVLLKLV 1158
>gi|328708218|ref|XP_003243626.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Acyrthosiphon
pisum]
Length = 1227
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/201 (35%), Positives = 108/201 (53%), Gaps = 12/201 (5%)
Query: 513 KSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVL 572
K++ +P G+VD ICGGPPCQG SG NRF + L KN ++ F+ +DF +PK+ +
Sbjct: 830 KNQNIPQKGEVDFICGGPPCQGFSGMNRFNSGQYSLF--KNSLIVSFLSYIDFYRPKYFV 887
Query: 573 MENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKL 632
MENV + V F + ++ + L + +M YQ G++ AG +G+PQ R R+ + A P EKL
Sbjct: 888 MENVRNFVSFKRSMVLKLTLRCITRMGYQCTFGILQAGNFGVPQTRRRLIIMAAAPGEKL 947
Query: 633 PPYALPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNY 686
P Y P + + V +F+ N + R L + DA SDLP + N
Sbjct: 948 PFYPEPINVFNRKSSSLSVQVGDEKFKTNCKYVNSAP----LRTLTVYDAWSDLPGISNG 1003
Query: 687 ESRDEIPYDREPETEFQCFIR 707
++ IPY+ P T Q +R
Sbjct: 1004 AYQERIPYNSTPITHLQKLLR 1024
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Query: 342 LDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLT 401
LD+++GCG +S GL +GL +++ WA++ ++ A + KLN+PE V E L
Sbjct: 765 LDIFAGCGGLSRGL----EDSGL-VISNWAIECDDKAAGAFKLNNPEATVFVEDCNHLLK 819
Query: 402 LLREWEK 408
L EK
Sbjct: 820 LAMAGEK 826
>gi|410950440|ref|XP_003981913.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Felis catus]
Length = 1610
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/201 (35%), Positives = 109/201 (54%), Gaps = 12/201 (5%)
Query: 513 KSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVL 572
+ + LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P++ L
Sbjct: 1201 RGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRPRYFL 1258
Query: 573 MENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKL 632
+ENV + V F + ++ + L L++M YQ G++ AG YG+ Q R R + A P EKL
Sbjct: 1259 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKL 1318
Query: 633 PPYALPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNY 686
P + P H R V +F N G R + ++D +SDLP V N
Sbjct: 1319 PLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEVRNG 1374
Query: 687 ESRDEIPYDREPETEFQCFIR 707
S EI Y+ EP++ FQ +R
Sbjct: 1375 ASALEILYNGEPQSWFQRQLR 1395
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 9/82 (10%)
Query: 326 ANECEVGEP----QKMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQS 381
+ CE EP Q ++ LD++SGCG +S G + AG++ T WA+++ + A Q+
Sbjct: 1116 SQTCEPSEPETEIQLPKLRTLDVFSGCGGLSEGF----HQAGIS-ETLWAIEMWDPAAQA 1170
Query: 382 LKLNHPETEVRNESAEDFLTLL 403
+LN+P + V E L L+
Sbjct: 1171 FRLNNPGSTVFTEDCNVLLKLV 1192
>gi|345786497|ref|XP_533919.3| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Canis lupus
familiaris]
Length = 1611
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/201 (35%), Positives = 109/201 (54%), Gaps = 12/201 (5%)
Query: 513 KSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVL 572
+ + LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P++ L
Sbjct: 1204 RGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRPRYFL 1261
Query: 573 MENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKL 632
+ENV + V F + ++ + L L++M YQ G++ AG YG+ Q R R + A P EKL
Sbjct: 1262 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKL 1321
Query: 633 PPYALPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNY 686
P + P H R V +F N G R + ++D +SDLP V N
Sbjct: 1322 PLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEVRNG 1377
Query: 687 ESRDEIPYDREPETEFQCFIR 707
S EI Y+ EP++ FQ +R
Sbjct: 1378 ASALEILYNGEPQSWFQRQLR 1398
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 11/87 (12%)
Query: 326 ANECEVGEPQKMDVKL-----LDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQ 380
+ CE EP+ ++KL LD++SGCG +S G + AG++ T WA+++ + A Q
Sbjct: 1119 SQTCEPSEPE-TEIKLPKLRTLDVFSGCGGLSEGF----HQAGIS-ETLWAIEMWDPAAQ 1172
Query: 381 SLKLNHPETEVRNESAEDFLTLLREWE 407
+ +LN+P + V E L L+ E
Sbjct: 1173 AFRLNNPGSTVFTEDCNVLLKLVMAGE 1199
>gi|301772046|ref|XP_002921451.1| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase
1-like [Ailuropoda melanoleuca]
Length = 1676
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/201 (35%), Positives = 109/201 (54%), Gaps = 12/201 (5%)
Query: 513 KSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVL 572
+ + LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P++ L
Sbjct: 1267 RGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRPRYFL 1324
Query: 573 MENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKL 632
+ENV + V F + ++ + L L++M YQ G++ AG YG+ Q R R + A P EKL
Sbjct: 1325 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKL 1384
Query: 633 PPYALPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNY 686
P + P H R V +F N G R + ++D +SDLP V N
Sbjct: 1385 PLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEVRNG 1440
Query: 687 ESRDEIPYDREPETEFQCFIR 707
S EI Y+ EP++ FQ +R
Sbjct: 1441 ASALEILYNGEPQSWFQRQLR 1461
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 11/83 (13%)
Query: 326 ANECEVGEPQKMDVKL-----LDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQ 380
+ CE EP+ ++KL LD++SGCG +S G + AG++ T WA+++ + A Q
Sbjct: 1182 SQTCEPSEPE-AEIKLPKLRTLDVFSGCGGLSEGF----HQAGIS-ETLWAIEMWDPAAQ 1235
Query: 381 SLKLNHPETEVRNESAEDFLTLL 403
+ +LN+P + V E L L+
Sbjct: 1236 AFRLNNPGSTVFTEDCNVLLKLV 1258
>gi|283549176|ref|NP_001164521.1| DNA methyltransferase 1a [Nasonia vitripennis]
Length = 1349
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 110/194 (56%), Gaps = 6/194 (3%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP G+VD++CGGPPCQG SG NRF ++ L KN ++ ++ D+ +P+F +MENV
Sbjct: 951 LPQRGEVDLLCGGPPCQGFSGMNRFNSRAYSLF--KNSLVVSYLSYCDYYRPRFFIMENV 1008
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F K ++ + L LI+M YQ G++ AG YG+PQ R R+ + A P E LP Y
Sbjct: 1009 RNFVTFKKSMVLKLTLRCLIRMGYQCTFGILQAGNYGVPQTRRRMIILAAAPGEVLPKYP 1068
Query: 637 LPTHDVVLRGV---IPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIP 693
P H + + ++ YD + A + ++DA+SDLPS+ + ++ D +
Sbjct: 1069 NPLHVFSKSACNLSVVIDNKKYFPTYDWVESAPY-KVTTIRDALSDLPSIKSGKNEDVMS 1127
Query: 694 YDREPETEFQCFIR 707
Y EP + FQ +R
Sbjct: 1128 YGSEPLSHFQRKLR 1141
Score = 42.4 bits (98), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 85/194 (43%), Gaps = 21/194 (10%)
Query: 229 YRARDTV-IESNAHLIDQRRVFFSEIQNDNPLECLVKKLNIARVP-LNIDLEAKKLAIPH 286
YR +T ES D +++SE + P C+V K + L+I +E +A P+
Sbjct: 760 YRPENTFKSESMKGRSDLNMLYWSEEEVTLPFTCVVGKCYLTYSENLDISVEEWTVAGPN 819
Query: 287 CDYYCDMMYLLPYSTFFSLPPENKRVSSETSSTISSDVDANECEVGEPQKMDV------- 339
+Y MY F P +K S S + + + P+ +D+
Sbjct: 820 -RFYFTQMYSHKEEEFDE--PPSKACSIGKLIKKSDKIKSKSKKADAPKLIDIPPDFPQI 876
Query: 340 ----KLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNES 395
+ LD+++GCG +S GL + AG+ + WA++++E A + +LN+P V
Sbjct: 877 KKKLRTLDVFAGCGGLSEGL----HQAGV-AESSWAIEVDEAAAHAYRLNNPNAAVFTGD 931
Query: 396 AEDFLTLLREWEKL 409
+L + + E +
Sbjct: 932 CNAYLKKVMDGETM 945
>gi|449674400|ref|XP_002155714.2| PREDICTED: DNA (cytosine-5)-methyltransferase PliMCI-like [Hydra
magnipapillata]
Length = 1283
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/193 (38%), Positives = 109/193 (56%), Gaps = 5/193 (2%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP G+VD++CGGPPCQG SG NRF ++ + KN + ++ D+ +PKF ++ENV
Sbjct: 878 LPRRGEVDLLCGGPPCQGFSGMNRFNQREYSMF--KNSLVTSYLSYCDYFRPKFFILENV 935
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F K ++ + L+ L++M YQ G++ AG+YG+PQ R R + A P E LP +
Sbjct: 936 RNFVSFKKSMVLKLTLSCLVKMGYQCEFGVLQAGSYGVPQTRRRAIIIAAAPGEILPKFP 995
Query: 637 LPTHDVVLRGVIPTEFERNTVAYDEGQQAELA--RKLLLQDAISDLPSVDNYESRDEIPY 694
P H V + N+ Y ++ A R + DA+SDLP + N ++ EI Y
Sbjct: 996 EPQH-VFASKALSLSVTINSHKYQALKRLHSAPYRTTTVYDAMSDLPEIKNGANKMEIGY 1054
Query: 695 DREPETEFQCFIR 707
D EP T FQ IR
Sbjct: 1055 DTEPLTHFQKKIR 1067
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 206 YICKIVEMFEAVDGTPYFTAQWYYRARDTVIESNAHLIDQRRVFFSEIQNDNPLECLVKK 265
YIC+++ M+E ++G F AQW YR+ +TV+ + D VF S+ +D L ++ K
Sbjct: 480 YICRVMYMWEDLNGDKKFHAQWLYRSSETVL---GEVGDPSEVFLSDDCDDIKLGAIMSK 536
Query: 266 LNIA 269
N++
Sbjct: 537 CNVS 540
>gi|37039880|gb|AAM96952.1| DNA cytosine-5-methyltransferase [Prunus persica]
Length = 1564
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/195 (39%), Positives = 102/195 (52%), Gaps = 9/195 (4%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LPLPG VD I GGPPC+G SG NRF +P K + + D+ +PK +ENV
Sbjct: 1214 LPLPGQVDFINGGPPCRGFSGMNRF--TQSPWIKFHCKMIWACLAFADYFRPKLFPLENV 1271
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
V F KG + LA L++M YQVR G++ AGAYG+ Q R R F+W A P E LP +
Sbjct: 1272 RKFVSFNKGQTFQLTLASLLEMGYQVRFGILEAGAYGISQSRKRAFIWAAAPEEVLPEWP 1331
Query: 637 LPTHDVVLRGVIPTEFE-RNTVAYDEGQQAELA---RKLLLQDAISDLPSVDNYESRDEI 692
P H + GV + + Y + L R + ++D I DLPSV+N +SR
Sbjct: 1332 EPMH---VFGVPKLKISLSQGLHYAAVRSTALGAPFRPITVRDTIGDLPSVENGDSRTNK 1388
Query: 693 PYDREPETEFQCFIR 707
Y + FQ IR
Sbjct: 1389 EYKEVAVSWFQKEIR 1403
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 84/183 (45%), Gaps = 35/183 (19%)
Query: 228 YYRARDTVIESNAHLIDQRRVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLAIPHC 287
++R D +E A+ D R V++SE + P++ + +K + KK +P C
Sbjct: 1005 FFRPEDISVE-KAYSSDIREVYYSEQTHIVPVDNIERKCEVR----------KKSDLPVC 1053
Query: 288 D--------YYCDMMYLLPYSTFFSLPPENKRVSSETSSTISSDVDANECEVGEP----- 334
+ ++C+ +Y + LP K S S +C+ GE
Sbjct: 1054 NAPVIFQHIFFCEHLYDPSKGSIKQLPAHIKLRYSTGGGHADSRKRKGKCKEGENVSEVE 1113
Query: 335 -QKMD-----VKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPE 388
Q++D + LD+++GCG +S GL +G + +T+WA++ E A + KLNHPE
Sbjct: 1114 NQRVDSEQKRLATLDIFAGCGGLSNGL----RQSGAS-ITKWAIEYEEPAGDAFKLNHPE 1168
Query: 389 TEV 391
+ V
Sbjct: 1169 SLV 1171
>gi|348550184|ref|XP_003460912.1| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase
1-like [Cavia porcellus]
Length = 1681
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 106/197 (53%), Gaps = 12/197 (6%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P+F L+ENV
Sbjct: 1207 LPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRPRFFLLENV 1264
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F + ++ + L L++M YQ G++ AG YG+ Q R R + A P EKLP +
Sbjct: 1265 RNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFP 1324
Query: 637 LPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRD 690
P H R V +F N R + ++D +SDLP + N S
Sbjct: 1325 EPLHVFAPRACQLSVVVDDKKFVSNITRLGSAP----FRTITVRDTMSDLPEIRNGASAP 1380
Query: 691 EIPYDREPETEFQCFIR 707
EI Y+ EP++ FQ +R
Sbjct: 1381 EIAYNGEPQSWFQRQLR 1397
Score = 45.8 bits (107), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 57/129 (44%), Gaps = 16/129 (12%)
Query: 286 HCDYYCDMMYLL----PYSTFFSLPPENKRVSSETSSTISSDVDANECEVGEPQK--MDV 339
+C D Y L S F PP + R + +V EP + + +
Sbjct: 1071 YCAGGPDRFYFLEAYNAKSKTFEDPPNHARSPRNKGKGKGKGKSKAKSQVSEPSEPELAI 1130
Query: 340 KL-----LDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNE 394
KL LD++SGCG +S G + AG+ T WA+++ E A Q+ +LN+P + V E
Sbjct: 1131 KLPKLRTLDVFSGCGGLSEGF----HQAGI-CETLWAIEMWEPAAQAFRLNNPGSTVFTE 1185
Query: 395 SAEDFLTLL 403
L L+
Sbjct: 1186 DCNVLLKLV 1194
>gi|147801053|emb|CAN77849.1| hypothetical protein VITISV_020833 [Vitis vinifera]
Length = 631
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 61/93 (65%), Positives = 78/93 (83%), Gaps = 3/93 (3%)
Query: 333 EPQKMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVR 392
+P K ++ LLD+YSGCG MSTGLCLGA L+G++LVTRWA+DIN+ AC+SLKLNHPET++R
Sbjct: 524 KPYKPELALLDIYSGCGGMSTGLCLGAKLSGVDLVTRWALDINKSACESLKLNHPETQIR 583
Query: 393 NESAEDFLTLLREWEKLCISFSLIARKDPQQQL 425
NESAEDFL LL+EW+KLC + + KD Q+ L
Sbjct: 584 NESAEDFLDLLKEWDKLCKRYVV---KDVQESL 613
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 11/101 (10%)
Query: 217 VDGTPYFTAQWYYRARDTVIESNAHLIDQRRVFFSEIQNDNPLECLVKKLNIARVPLNID 276
+D YF QW++R DTV+E +++R+F+S + NDN L+C+V K+N+
Sbjct: 1 MDDEDYFRVQWFFRPEDTVMEEEGAFHEKKRLFYSNLVNDNLLDCIVSKVNL-------- 52
Query: 277 LEAKKLAIPHCDYYCDMMYLLPYSTFFSLPPENKRVSSETS 317
K +I CD+Y DM YL+ YSTF ++ + + TS
Sbjct: 53 ---KSNSILPCDFYYDMKYLIDYSTFCTMEVGGETLQVGTS 90
>gi|355684539|gb|AER97432.1| DNA -methyltransferase 1 [Mustela putorius furo]
Length = 939
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 109/201 (54%), Gaps = 12/201 (5%)
Query: 513 KSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVL 572
+ + LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P++ L
Sbjct: 531 RGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRPRYFL 588
Query: 573 MENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKL 632
+ENV + V F + ++ + L L++M YQ G++ AG YG+ Q R R + A P E+L
Sbjct: 589 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEQL 648
Query: 633 PPYALPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNY 686
P + P H R V +F N G R + ++D +SDLP V N
Sbjct: 649 PLFPEPLHVFAPRACQLXXVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEVRNG 704
Query: 687 ESRDEIPYDREPETEFQCFIR 707
S EI Y+ EP++ FQ +R
Sbjct: 705 ASSLEILYNGEPQSWFQRQLR 725
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 11/83 (13%)
Query: 326 ANECEVGEPQKMDVKL-----LDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQ 380
+ CE EP+ ++KL LD++SGCG +S G + AG++ T WA+++ + A Q
Sbjct: 446 SQTCEPSEPE-TEIKLPKLRTLDVFSGCGGLSEGF----HQAGIS-ETLWAIEMWDPAAQ 499
Query: 381 SLKLNHPETEVRNESAEDFLTLL 403
+ +LN+P + V E L L+
Sbjct: 500 AFRLNNPGSTVFTEDCNVLLKLV 522
>gi|222840488|gb|ACM68681.1| DNA methyltransferase 1 [Capra hircus]
Length = 1420
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 108/201 (53%), Gaps = 12/201 (5%)
Query: 513 KSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVL 572
+ + LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P++ L
Sbjct: 1131 RGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRPRYFL 1188
Query: 573 MENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKL 632
+ENV + V F + ++ + L L++M YQ G++ AG YG+ Q R R + A P E L
Sbjct: 1189 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEPL 1248
Query: 633 PPYALPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNY 686
P + P H R V +F N G R + ++D +SDLP V N
Sbjct: 1249 PLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEVRNG 1304
Query: 687 ESRDEIPYDREPETEFQCFIR 707
S EI Y+ EP++ FQ +R
Sbjct: 1305 ASALEISYNGEPQSWFQRQLR 1325
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 54/115 (46%), Gaps = 12/115 (10%)
Query: 300 STFFSLPPENKRVSSETSSTISSDVDANECEVGEPQKMDVKL-------LDLYSGCGAMS 352
S F PP + R + + + EP +++ ++ LD++SGCG +S
Sbjct: 1017 SKSFEDPPNHARSPGNKGKGKGKGKNRTKSQTCEPSELETEIKLPKLRTLDVFSGCGGLS 1076
Query: 353 TGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWE 407
G + AG++ T WA+++ + A Q+ +LN+P + V E L L+ E
Sbjct: 1077 EGF----HQAGIS-ETLWAIEMWDPAAQAFRLNNPGSTVFTEDCNVLLKLVMAGE 1126
>gi|156739999|gb|ABU93584.1| DNA cytosine 5-methyltransferase 1 [Ovis aries]
Length = 1572
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 108/201 (53%), Gaps = 12/201 (5%)
Query: 513 KSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVL 572
+ + LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P++ L
Sbjct: 1174 RGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRPRYFL 1231
Query: 573 MENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKL 632
+ENV + V F + ++ + L L++M YQ G++ AG YG+ Q R R + A P E L
Sbjct: 1232 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEPL 1291
Query: 633 PPYALPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNY 686
P + P H R V +F N G R + ++D +SDLP + N
Sbjct: 1292 PLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEIRNG 1347
Query: 687 ESRDEIPYDREPETEFQCFIR 707
S EI Y+ EP++ FQ +R
Sbjct: 1348 ASALEISYNGEPQSWFQRQLR 1368
Score = 43.1 bits (100), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 52/111 (46%), Gaps = 12/111 (10%)
Query: 300 STFFSLPPENKRVSSETSSTISSDVDANECEVGEPQKMDVKL-------LDLYSGCGAMS 352
S F PP + R + + + EP +++ ++ LD+ SGCG +S
Sbjct: 1060 SKSFEDPPNHARSHGNKGKGKGKGKNRTKSQTCEPSELETEIKLPKLRTLDVSSGCGGLS 1119
Query: 353 TGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLL 403
G + AG++ T WA+++ + A Q+ +LN+P + V E L L+
Sbjct: 1120 EGF----HQAGIS-ETLWAIEMWDPAAQAFRLNNPGSTVFTEDCNVLLKLV 1165
>gi|37728049|gb|AAO44952.1| cytosine-5-methyltransferase [Bos taurus]
Length = 1611
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 108/201 (53%), Gaps = 12/201 (5%)
Query: 513 KSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVL 572
+ + LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P++ L
Sbjct: 1204 RGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRPRYFL 1261
Query: 573 MENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKL 632
+ENV + V F + ++ + L L++M YQ G++ AG YG+ Q R R + A P E L
Sbjct: 1262 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEPL 1321
Query: 633 PPYALPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNY 686
P + P H R V +F N G R + ++D +SDLP + N
Sbjct: 1322 PLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEIRNG 1377
Query: 687 ESRDEIPYDREPETEFQCFIR 707
S EI Y+ EP++ FQ +R
Sbjct: 1378 ASALEISYNGEPQSWFQRQLR 1398
Score = 45.8 bits (107), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 54/111 (48%), Gaps = 12/111 (10%)
Query: 300 STFFSLPPENKRVSSETSSTISSDVDANECEVGEPQKMDVKL-------LDLYSGCGAMS 352
S F PP + R + + + + EP +++ ++ LD++SGCG +S
Sbjct: 1090 SKSFEDPPNHARSTGNKGKGKGKGKNRTKSQTCEPSELETEIKLPKLRTLDVFSGCGGLS 1149
Query: 353 TGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLL 403
G + AG++ T WA+++ + A Q+ +LN+P + V E L L+
Sbjct: 1150 EGF----HQAGIS-ETLWAIEMWDPAAQAFRLNNPGSTVFTEDCNVLLKLV 1195
>gi|317108162|ref|NP_872592.2| DNA (cytosine-5)-methyltransferase 1 [Bos taurus]
gi|108935977|sp|Q24K09.1|DNMT1_BOVIN RecName: Full=DNA (cytosine-5)-methyltransferase 1; Short=Dnmt1
gi|89994055|gb|AAI14064.1| DNA (cytosine-5-)-methyltransferase 1 [Bos taurus]
gi|296485884|tpg|DAA27999.1| TPA: DNA (cytosine-5)-methyltransferase 1 [Bos taurus]
Length = 1611
Score = 132 bits (331), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 108/201 (53%), Gaps = 12/201 (5%)
Query: 513 KSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVL 572
+ + LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P++ L
Sbjct: 1204 RGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRPRYFL 1261
Query: 573 MENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKL 632
+ENV + V F + ++ + L L++M YQ G++ AG YG+ Q R R + A P E L
Sbjct: 1262 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEPL 1321
Query: 633 PPYALPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNY 686
P + P H R V +F N G R + ++D +SDLP + N
Sbjct: 1322 PLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEIRNG 1377
Query: 687 ESRDEIPYDREPETEFQCFIR 707
S EI Y+ EP++ FQ +R
Sbjct: 1378 ASALEISYNGEPQSWFQRQLR 1398
Score = 45.8 bits (107), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 54/111 (48%), Gaps = 12/111 (10%)
Query: 300 STFFSLPPENKRVSSETSSTISSDVDANECEVGEPQKMDVKL-------LDLYSGCGAMS 352
S F PP + R + + + + EP +++ ++ LD++SGCG +S
Sbjct: 1090 SKSFEDPPNHARSTGNKGKGKGKGKNRTKSQTCEPSELETEIKLPKLRTLDVFSGCGGLS 1149
Query: 353 TGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLL 403
G + AG++ T WA+++ + A Q+ +LN+P + V E L L+
Sbjct: 1150 EGF----HQAGIS-ETLWAIEMWDPAAQAFRLNNPGSTVFTEDCNVLLKLV 1195
>gi|350422372|ref|XP_003493144.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Bombus
impatiens]
Length = 1368
Score = 132 bits (331), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 68/193 (35%), Positives = 105/193 (54%), Gaps = 4/193 (2%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP G V+++CGGPPCQG SG NRF ++ L KN ++ ++ D+ +P F +MENV
Sbjct: 966 LPQKGQVELLCGGPPCQGFSGMNRFNSRQYSLF--KNSLVVSYLSYCDYYRPNFFIMENV 1023
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F + ++ + L L++M YQ G++ AG YG+PQ R R+ + A P + LP Y
Sbjct: 1024 RNFVSFKRSMVLKLTLRCLVRMGYQCTFGILQAGNYGVPQTRRRIIILAAAPGQILPQYP 1083
Query: 637 LPTHDVVLRGVIPTEFERNTVAYDEGQQAELA--RKLLLQDAISDLPSVDNYESRDEIPY 694
PTH R + N E A R + ++DA+ DLP + N +++E+ Y
Sbjct: 1084 EPTHVFSKRACQLSVLVDNKKYSTNCSWTESAPFRTISVRDALFDLPEIKNGWNKEEMSY 1143
Query: 695 DREPETEFQCFIR 707
+ + FQ IR
Sbjct: 1144 TNDAISHFQRRIR 1156
Score = 39.7 bits (91), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 13/87 (14%)
Query: 339 VKLLDLYSGCGAMSTGLCLGANLAGL--NLVTRWAVDINEYACQSLKLNHPETEVRNESA 396
+K LD+++GCG +S GL + AG+ NL WA++ E A + +LN+P T V +
Sbjct: 894 LKTLDVFAGCGGLSEGL----HQAGIAENL---WAIEKEEAAANAYRLNNPNTTVFTDDC 946
Query: 397 EDFLTLLREWEKLCISFSLIARKDPQQ 423
L + + E + + I +K PQ+
Sbjct: 947 NILLKKVMDGE----TTNEIGQKLPQK 969
>gi|57164173|ref|NP_001009473.1| DNA (cytosine-5)-methyltransferase 1 [Ovis aries]
gi|29536011|gb|AAO39704.1| DNA (cytosine-5)-methyltransferase 1 [Ovis aries]
Length = 1611
Score = 132 bits (331), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 108/201 (53%), Gaps = 12/201 (5%)
Query: 513 KSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVL 572
+ + LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P++ L
Sbjct: 1204 RGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRPRYFL 1261
Query: 573 MENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKL 632
+ENV + V F + ++ + L L++M YQ G++ AG YG+ Q R R + A P E L
Sbjct: 1262 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEPL 1321
Query: 633 PPYALPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNY 686
P + P H R V +F N G R + ++D +SDLP + N
Sbjct: 1322 PLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEIRNG 1377
Query: 687 ESRDEIPYDREPETEFQCFIR 707
S EI Y+ EP++ FQ +R
Sbjct: 1378 ASALEISYNGEPQSWFQRQLR 1398
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 12/111 (10%)
Query: 300 STFFSLPPENKRVSSETSSTISSDVDANECEVGEPQKMDVKL-------LDLYSGCGAMS 352
S F PP + R + + + EP +++ ++ LD++SGCG +S
Sbjct: 1090 SKSFEDPPNHARSHGNKGKGKGKGKNRTKSQTCEPSELETEIKLPKLRTLDVFSGCGGLS 1149
Query: 353 TGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLL 403
G + AG++ T WA+++ + A Q+ +LN+P + V E L L+
Sbjct: 1150 EGF----HQAGIS-ETLWAIEMWDPAAQAFRLNNPGSTVFTEYCNVLLKLV 1195
>gi|440891547|gb|ELR45163.1| DNA (cytosine-5)-methyltransferase 1 [Bos grunniens mutus]
Length = 1618
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 111/208 (53%), Gaps = 19/208 (9%)
Query: 513 KSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVL 572
+ + LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P++ L
Sbjct: 1204 RGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRPRYFL 1261
Query: 573 MENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKL 632
+ENV + V F + ++ + L L++M YQ G++ AG YG+ Q R R + A P E L
Sbjct: 1262 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEPL 1321
Query: 633 PPYALPTHDVV------------LRGVI-PTEFERNTVAYDEGQQAELARKLLLQDAISD 679
P + P H V LR V+ +F N G R + ++D +SD
Sbjct: 1322 PLFPEPVHVVAPRXXXXXXXXCPLRVVVDDKKFVSNITRLSSGP----FRTITVRDTMSD 1377
Query: 680 LPSVDNYESRDEIPYDREPETEFQCFIR 707
LP + N S EI Y+ EP++ FQ +R
Sbjct: 1378 LPEIRNGASALEISYNGEPQSWFQRQLR 1405
Score = 43.9 bits (102), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 51/102 (50%), Gaps = 12/102 (11%)
Query: 300 STFFSLPPENKRVSSETSSTISSDVDANECEVGEPQKMDVKL-------LDLYSGCGAMS 352
S F PP + R + + + + EP +++ ++ LD++SGCG +S
Sbjct: 1090 SKSFEDPPNHARSTGNKGKGKGKGKNRTKSQTCEPSELETEIKLPKLRTLDVFSGCGGLS 1149
Query: 353 TGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNE 394
G + AG++ T WA+++ + A Q+ +LN+P + V E
Sbjct: 1150 EGF----HQAGIS-ETLWAIEMWDPAAQAFRLNNPGSTVFTE 1186
>gi|168805279|gb|ACA28713.1| DNA methyltransferase b [Bos taurus]
Length = 1348
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 108/201 (53%), Gaps = 12/201 (5%)
Query: 513 KSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVL 572
+ + LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P++ L
Sbjct: 923 RGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRPRYFL 980
Query: 573 MENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKL 632
+ENV + V F + ++ + L L++M YQ G++ AG YG+ Q R R + A P E L
Sbjct: 981 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEPL 1040
Query: 633 PPYALPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNY 686
P + P H R V +F N G R + ++D +SDLP + N
Sbjct: 1041 PLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEIRNG 1096
Query: 687 ESRDEIPYDREPETEFQCFIR 707
S EI Y+ EP++ FQ +R
Sbjct: 1097 ASALEISYNGEPQSWFQRQLR 1117
Score = 45.8 bits (107), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 54/111 (48%), Gaps = 12/111 (10%)
Query: 300 STFFSLPPENKRVSSETSSTISSDVDANECEVGEPQKMDVKL-------LDLYSGCGAMS 352
S F PP + R + + + + EP +++ ++ LD++SGCG +S
Sbjct: 809 SKSFEDPPNHARSTGNKGKGKGKGKNRTKSQTCEPSELETEIKLPKLRTLDVFSGCGGLS 868
Query: 353 TGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLL 403
G + AG++ T WA+++ + A Q+ +LN+P + V E L L+
Sbjct: 869 EGF----HQAGIS-ETLWAIEMWDPAAQAFRLNNPGSTVFTEDCNVLLKLV 914
>gi|340728437|ref|XP_003402531.1| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase
1-like, partial [Bombus terrestris]
Length = 635
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/193 (35%), Positives = 105/193 (54%), Gaps = 4/193 (2%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP G V+++CGGPPCQG SG NRF ++ L KN ++ ++ D+ +P F +MENV
Sbjct: 311 LPQKGQVELLCGGPPCQGFSGMNRFNSRQYSLF--KNSLVVSYLSYCDYYRPNFFIMENV 368
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F + ++ + L L++M YQ G++ AG YG+PQ R R+ + A P + LP Y
Sbjct: 369 RNFVTFERSMVLKLTLRCLVRMGYQCTFGILQAGNYGIPQTRRRIIILAAAPGQILPQYP 428
Query: 637 LPTHDVVLRGVIPTEFERNTVAYDEGQQAELA--RKLLLQDAISDLPSVDNYESRDEIPY 694
PTH R + N E A R + ++DA+ DLP + N +++E+ Y
Sbjct: 429 EPTHVFSKRTCRLSVLVDNKKYSTNCSWTESAPFRTINVRDALFDLPEIKNGWNKEEMSY 488
Query: 695 DREPETEFQCFIR 707
+ + FQ IR
Sbjct: 489 TNDAISHFQRRIR 501
>gi|431918990|gb|ELK17857.1| DNA (cytosine-5)-methyltransferase 1 [Pteropus alecto]
Length = 1535
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 106/195 (54%), Gaps = 23/195 (11%)
Query: 513 KSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVL 572
+ + LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P++ L
Sbjct: 1149 RGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRPRYFL 1206
Query: 573 MENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKL 632
+ENV + V F + ++ + L L++M YQ G++ AG YG+ Q R R + A P EKL
Sbjct: 1207 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKL 1266
Query: 633 PPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEI 692
P + P H V+ G R + ++D +SDLP + N S EI
Sbjct: 1267 PLFPEPLH-VLSSGPF--------------------RTITVRDTMSDLPEIRNGASALEI 1305
Query: 693 PYDREPETEFQCFIR 707
Y+ EP++ FQ +R
Sbjct: 1306 SYNGEPQSWFQRQLR 1320
>gi|67970373|dbj|BAE01529.1| unnamed protein product [Macaca fascicularis]
Length = 493
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 106/198 (53%), Gaps = 12/198 (6%)
Query: 509 THGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKP 568
T + + LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P
Sbjct: 302 TTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRP 359
Query: 569 KFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQP 628
+F L+ENV + V F + ++ + L L++M YQ G++ AG YG+ Q R R + A P
Sbjct: 360 RFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAP 419
Query: 629 TEKLPPYALPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPS 682
EKLP + P H R V +F N G R + ++D +SDLP
Sbjct: 420 GEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPE 475
Query: 683 VDNYESRDEIPYDREPET 700
V N S EI Y+ EP++
Sbjct: 476 VRNGASALEISYNGEPQS 493
Score = 47.8 bits (112), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 11/87 (12%)
Query: 326 ANECEVGEPQKMDVKL-----LDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQ 380
+ CE EP+ M++KL LD++SGCG +S G + AG++ T WA+++ + A Q
Sbjct: 221 SQACEPSEPE-MEIKLPKLRTLDVFSGCGGLSEGF----HQAGIS-DTLWAIEMWDPAAQ 274
Query: 381 SLKLNHPETEVRNESAEDFLTLLREWE 407
+ +LN+P + V E L L+ E
Sbjct: 275 AFRLNNPGSTVFTEDCNILLKLVMAGE 301
>gi|31074161|gb|AAP20551.1| DNA cytosine-5 methyltransferase 1 [Bos taurus]
Length = 1611
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 110/206 (53%), Gaps = 13/206 (6%)
Query: 508 VTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLK 567
VT+ K+L GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +
Sbjct: 1200 VTNSRGQKLL-QKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYR 1256
Query: 568 PKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQ 627
P++ L+ENV + V F + ++ + L L++ YQ G++ AG YG+ Q R R + A
Sbjct: 1257 PRYFLLENVRNFVSFKRSMVLKLTLRCLVRRGYQCTFGVLQAGQYGVAQTRRRAIILAAA 1316
Query: 628 PTEKLPPYALPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLP 681
P E LP + P H R V +F N G R + ++D +SDLP
Sbjct: 1317 PGEPLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLP 1372
Query: 682 SVDNYESRDEIPYDREPETEFQCFIR 707
+ N S EI Y+REP++ FQ +R
Sbjct: 1373 EIRNGASALEISYNREPQSWFQRQLR 1398
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 49/99 (49%), Gaps = 12/99 (12%)
Query: 300 STFFSLPPENKRVSSETSSTISSDVDANECEVGEPQKMDVKL-------LDLYSGCGAMS 352
S F PP + R + + + + EP +++ ++ LD++SGCG +S
Sbjct: 1090 SKSFEDPPNHARSTGNKGKGKGKGKNRTKSQTCEPSELETEIKLPKLRTLDVFSGCGGLS 1149
Query: 353 TGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEV 391
G + AG++ T WA+++ + A Q+ + N+P + V
Sbjct: 1150 EGF----HQAGIS-ETLWAIEMWDPAAQAFRFNNPGSTV 1183
>gi|343172220|gb|AEL98814.1| DNA (cytosine-5)-methyltransferase, partial [Silene latifolia]
Length = 264
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/124 (48%), Positives = 81/124 (65%), Gaps = 2/124 (1%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP PG VD I GGPPCQG SG NRF NK + + + + ++ F+ D+L+PK+ L+ENV
Sbjct: 116 LPRPGQVDFINGGPPCQGFSGMNRF-NK-SAWSKVQCEMILAFLSFADYLRPKYFLLENV 173
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F KG R A+A L++M YQVR G++ AGA+G+ Q R R F+W A P E LP +
Sbjct: 174 RNFVSFNKGQTFRLAIASLLEMGYQVRFGILDAGAFGVSQSRKRAFIWAASPEETLPDWP 233
Query: 637 LPTH 640
P H
Sbjct: 234 EPMH 237
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 5/56 (8%)
Query: 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEV 391
K + LD+++GCG +S GL +G++ T+WA++ E A ++ LNHPE +
Sbjct: 23 KNQLATLDIFAGCGGLSEGL----ERSGVS-QTKWAIEYEEPAGEAFNLNHPEASL 73
>gi|73853882|ref|NP_001027526.1| DNA (cytosine-5)-methyltransferase 1 [Sus scrofa]
gi|66363554|gb|AAY45793.1| DNA methyltransferase 1 [Sus scrofa]
Length = 1610
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 108/199 (54%), Gaps = 10/199 (5%)
Query: 513 KSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVL 572
+ + LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P++ L
Sbjct: 1203 RGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRPRYFL 1260
Query: 573 MENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKL 632
+ENV + V F + ++ + L L++M YQ G++ AG YG+ Q R R + A P E+L
Sbjct: 1261 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEQL 1320
Query: 633 P----PYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYES 688
P P P + V +F N G R + ++D +SDLP + N S
Sbjct: 1321 PLFPEPLFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEIRNGAS 1376
Query: 689 RDEIPYDREPETEFQCFIR 707
+I Y+ EP++ FQ +R
Sbjct: 1377 AQDISYNGEPQSWFQRQLR 1395
Score = 43.1 bits (100), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 12/111 (10%)
Query: 300 STFFSLPPENKRVSSETSSTISSDVDANECEVGEPQKMDVKL-------LDLYSGCGAMS 352
S F PP + R + + EP +++ ++ LD++SGCG +S
Sbjct: 1089 SKSFEDPPNHARSPGNKGKGKGKGKSRTKSQTCEPSELETEIKLPKLRTLDVFSGCGGLS 1148
Query: 353 TGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLL 403
G + AG++ T WA+++ + A + +LN+P + V E L L+
Sbjct: 1149 EGF----HQAGIS-ETLWAIEMWDPAAHAFRLNNPGSTVFTEDCNVLLKLV 1194
>gi|20137608|sp|Q9Z330.2|DNMT1_RAT RecName: Full=DNA (cytosine-5)-methyltransferase 1; Short=Dnmt1;
AltName: Full=DNA MTase RnoIP; Short=M.RnoIP; AltName:
Full=DNA methyltransferase I; AltName: Full=MCMT
Length = 1622
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 98/184 (53%), Gaps = 12/184 (6%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P+F L+ENV
Sbjct: 1216 LPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRPRFFLLENV 1273
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F + ++ + L L++M YQ G++ AG YG+ Q R R + A P EKLP +
Sbjct: 1274 RNFVSFRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFP 1333
Query: 637 LPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRD 690
P H R V +F N G R + ++D +SDLP + N S
Sbjct: 1334 EPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITMRDTMSDLPEIQNGASAP 1389
Query: 691 EIPY 694
EI Y
Sbjct: 1390 EISY 1393
Score = 46.6 bits (109), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 12/108 (11%)
Query: 303 FSLPPENKRVSSETSSTISSDVDANECEVGEPQKMD-------VKLLDLYSGCGAMSTGL 355
F PP + R + +V EP++ + ++ LD++SGCG GL
Sbjct: 1101 FEDPPNHARSPGNKGKGKGKGKGKGKPQVSEPKEPEAAIKLPKLRTLDVFSGCG----GL 1156
Query: 356 CLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLL 403
G + AG++ T WA+++ E A Q+ +LN+P T V E L L+
Sbjct: 1157 TEGFHQAGIS-ETLWAIEMWEPAAQAFRLNNPGTTVFTEDCNVLLKLV 1203
>gi|159481068|ref|XP_001698604.1| cytosine-C5 specific DNA methyltransferase [Chlamydomonas
reinhardtii]
gi|158282344|gb|EDP08097.1| cytosine-C5 specific DNA methyltransferase [Chlamydomonas
reinhardtii]
Length = 2204
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 103/196 (52%), Gaps = 15/196 (7%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP PG V ++ GGPPCQG SG NRF + +N ++ + DF +P++ L+ENV
Sbjct: 1816 LPAPGAVGLMMGGPPCQGYSGMNRFNT--GMWSQVQNSMVMAYTSYCDFYRPRYFLLENV 1873
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V + G + R + L+++ YQVR G++ AG +G+ Q R R F+W A P E LP +
Sbjct: 1874 RNFVAYNDGRVFRLVVRTLLELGYQVRFGVLNAGCFGVSQSRKRTFIWAALPGELLPDWP 1933
Query: 637 LPTH-------DVVLRGVIPTEFERNTVAYDEGQQAELA--RKLLLQDAISDLPSVDNYE 687
H V +RGV + G A A R + ++D I DLP V+N
Sbjct: 1934 AALHRFKQEQLGVRMRGV----GGDGQFFHASGPPAAGAPLRTVTVRDVIGDLPPVENGS 1989
Query: 688 SRDEIPYDREPETEFQ 703
+ D +PY +P + FQ
Sbjct: 1990 TTDPLPYTGQPVSAFQ 2005
Score = 39.7 bits (91), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEV 391
+ + +D+++GCG +S G + AG+ +RWA++ + A + KLN+P T V
Sbjct: 1724 LKLPTMDIFAGCGGLSEGF----HQAGV-AESRWAIEYDREAADAFKLNNPHTTV 1773
>gi|194688394|gb|ACF78281.1| unknown [Zea mays]
Length = 322
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/107 (59%), Positives = 75/107 (70%), Gaps = 1/107 (0%)
Query: 606 MMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQA 665
MM AG YGLPQFRMRVFLWGA + LP Y LPT+DVV+RG P F + VAYDE Q+
Sbjct: 1 MMVAGCYGLPQFRMRVFLWGALSSMVLPKYPLPTYDVVVRGGAPNAFSQCMVAYDETQKP 60
Query: 666 ELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQCFIRL-RKD 711
L + LLL DAISDLP V N++ D + Y P+TEFQ +IRL RKD
Sbjct: 61 SLKKALLLGDAISDLPKVQNHQPNDVMEYGGSPKTEFQRYIRLSRKD 107
>gi|343172218|gb|AEL98813.1| DNA (cytosine-5)-methyltransferase, partial [Silene latifolia]
Length = 264
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/124 (47%), Positives = 80/124 (64%), Gaps = 2/124 (1%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP PG VD I GGPPCQG SG NRF NK + + + + ++ F+ D+ +PK+ L+ENV
Sbjct: 116 LPRPGQVDFINGGPPCQGFSGMNRF-NK-SAWSKVQCEMILAFLSFADYFRPKYFLLENV 173
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F KG R A+A L++M YQVR G++ AGA+G+ Q R R F+W A P E LP +
Sbjct: 174 RNFVSFNKGQTFRLAIASLLEMGYQVRFGILDAGAFGVSQSRKRAFIWAASPEETLPDWP 233
Query: 637 LPTH 640
P H
Sbjct: 234 EPMH 237
Score = 42.7 bits (99), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 5/56 (8%)
Query: 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEV 391
K + LD+++GCG +S GL +G++ T+WA++ E A ++ LNHPE V
Sbjct: 23 KNQLATLDIFAGCGGLSEGL----ERSGVS-QTKWAIEYEEPAGEAFNLNHPEASV 73
>gi|341868915|gb|AEK98581.1| chromomethyltransferase 2a1 [Vitis amurensis]
Length = 70
Score = 127 bits (318), Expect = 3e-26, Method: Composition-based stats.
Identities = 56/70 (80%), Positives = 63/70 (90%)
Query: 535 VSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALAR 594
+SGFNRFRNK+NPL D KNKQL+VFMD+V++LKP+FVLMENVVDIVKFA G LGRYAL R
Sbjct: 1 ISGFNRFRNKENPLEDPKNKQLVVFMDVVNYLKPRFVLMENVVDIVKFAGGYLGRYALGR 60
Query: 595 LIQMNYQVRM 604
LI MNYQ RM
Sbjct: 61 LIGMNYQTRM 70
>gi|23306232|emb|CAD43079.1| DNA methyltransferase 1c [Paracentrotus lividus]
Length = 1375
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 109/191 (57%), Gaps = 9/191 (4%)
Query: 499 NCGEKIKEFVTHGFKS----KILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNK 554
+C E ++ V G K+ + LP GDV+++CGGPPCQG SG NRF +++ + KN
Sbjct: 1183 DCNELLR-LVMQGEKTSRTGQKLPQKGDVELLCGGPPCQGFSGMNRFNSRE--YSKFKNS 1239
Query: 555 QLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGL 614
+ ++ D+ +P+F L+ENV + V + K ++ + AL LI+M YQ G++ AG YG+
Sbjct: 1240 LISSYLSYCDYYRPRFFLLENVRNFVSYKKNMVLKLALRCLIRMGYQCTFGILQAGQYGV 1299
Query: 615 PQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEF--ERNTVAYDEGQQAELARKLL 672
PQ R R + A P EKLP Y P H R + E+ + ++ + R +
Sbjct: 1300 PQTRRRAIILAAAPGEKLPFYPEPLHVFSTRACSLSVMIGEKKIESNNQWCLSAPYRTIT 1359
Query: 673 LQDAISDLPSV 683
++D++SDLP++
Sbjct: 1360 VRDSMSDLPTI 1370
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 339 VKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAED 398
+K LD+++GCG +S G + AG+ + WA++ E A Q+ +LN+P + V ++ +
Sbjct: 1132 LKCLDVFAGCGGLSEGF----HQAGI-CESSWAIEKEEPAAQAYRLNNPGSTVFSDDCNE 1186
Query: 399 FLTLLREWEKLCISFSLIARKDPQQ 423
L L+ + EK S +K PQ+
Sbjct: 1187 LLRLVMQGEKT----SRTGQKLPQK 1207
>gi|307111085|gb|EFN59320.1| hypothetical protein CHLNCDRAFT_137705 [Chlorella variabilis]
Length = 1369
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 104/194 (53%), Gaps = 14/194 (7%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LPLPG+VD ICGGPPCQG SG NRF ++ N ++ ++ FL P++ L+ENV
Sbjct: 1017 LPLPGEVDFICGGPPCQGYSGMNRF--------NKGNWSMVQNSMVMAFLSPRYFLLENV 1068
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V K R + L+ M YQVR G++ AG +G+ Q R R F+W A P E LP +
Sbjct: 1069 RNFVSHNKSFTFRLTVRSLLDMGYQVRFGVLNAGNFGVAQSRKRTFIWAAAPGELLPDWP 1128
Query: 637 LPTH---DVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIP 693
H L +P + V G A L R + ++DAI+DLP ++N +E+
Sbjct: 1129 KLMHCFRTPQLTINLPGGVQYRAVPQTVG--APL-RPVTVRDAIADLPEIENGHMVEEME 1185
Query: 694 YDREPETEFQCFIR 707
Y P + FQ +R
Sbjct: 1186 YVGGPVSAFQQHVR 1199
>gi|341868917|gb|AEK98582.1| chromomethyltransferase 2a2 [Vitis amurensis]
Length = 70
Score = 125 bits (313), Expect = 1e-25, Method: Composition-based stats.
Identities = 55/70 (78%), Positives = 63/70 (90%)
Query: 535 VSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALAR 594
+SGFNRFRNK+NPL D KNKQL+VFMD+V++LKP+FVLMENVV+IVKFA G LGRYAL R
Sbjct: 1 ISGFNRFRNKENPLEDPKNKQLVVFMDVVNYLKPRFVLMENVVNIVKFAGGYLGRYALGR 60
Query: 595 LIQMNYQVRM 604
LI MNYQ RM
Sbjct: 61 LIGMNYQTRM 70
>gi|385139885|gb|AFI41915.1| Met1-type cytosine DNA-methyltransferase, partial [Betula
platyphylla]
Length = 169
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/124 (46%), Positives = 78/124 (62%), Gaps = 2/124 (1%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LPLPG VD I GGPPCQG SG NRF + + + + ++ F+ D+ +PK+ L+ENV
Sbjct: 42 LPLPGQVDFINGGPPCQGFSGMNRF--NQSTWSKVQCEMILAFLSFADYFRPKYFLLENV 99
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F KG R LA L++M YQVR G++ AGA+G+ Q R R F+W A P E LP +
Sbjct: 100 RNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAFGVSQSRKRAFIWAASPEEILPEWP 159
Query: 637 LPTH 640
P H
Sbjct: 160 EPMH 163
>gi|4704471|gb|AAD28102.1| cytosine DNA methyltransferase [Rattus norvegicus]
Length = 349
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 98/184 (53%), Gaps = 12/184 (6%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P+F L+ENV
Sbjct: 48 LPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRPRFFLLENV 105
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F + ++ + L L++M YQ G++ AG YG+ Q R R + A P EKLP +
Sbjct: 106 RNFVSFRRSMVLKLTLRCLVRMGYQCIFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFP 165
Query: 637 LPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRD 690
P H R V +F N G R + ++D +SDLP + N S
Sbjct: 166 EPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITMRDTMSDLPEIQNGASAP 221
Query: 691 EIPY 694
EI Y
Sbjct: 222 EISY 225
>gi|242023477|ref|XP_002432160.1| DNA methyltransferase, putative [Pediculus humanus corporis]
gi|212517542|gb|EEB19422.1| DNA methyltransferase, putative [Pediculus humanus corporis]
Length = 1161
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 106/196 (54%), Gaps = 14/196 (7%)
Query: 518 PLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVV 577
P G+V+ +CGGPPCQG S NRF K+ + N +I ++ D+ +PKF L+ENV
Sbjct: 771 PEKGEVEFLCGGPPCQGFSTMNRFTTKEE--SQYNNSLIITYLSFCDYYRPKFFLLENVK 828
Query: 578 DIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYAL 637
+ + F K L ++ L+ L+ M YQ G++ AG YGLPQ R R+F+ A P +LP +
Sbjct: 829 NFLSFKKSLFFKHVLSCLVTMGYQCSFGVLQAGNYGLPQSRRRLFILAAAPGYRLPFFPK 888
Query: 638 PTHDVVLRGVIPT-EFERNTVAYDEGQQAELA-----RKLLLQDAISDLPSVDNYESRDE 691
PTH V G + + E N + L+ R + ++DAI DLP V +++
Sbjct: 889 PTH--VFYGSLKNFDSEMNYTNFRCRFSKTLSPSAPFRNVTVRDAIFDLPPVGKASNKN- 945
Query: 692 IPYDREPETEFQCFIR 707
+ P T +Q F++
Sbjct: 946 --FSSSP-TSYQRFLK 958
>gi|384244928|gb|EIE18425.1| S-adenosyl-L-methionine-dependent methyltransferase, partial
[Coccomyxa subellipsoidea C-169]
Length = 468
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 105/212 (49%), Gaps = 26/212 (12%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP PG+VD +CGGPPCQG SG NRF L +N ++ ++ DF +P++ L+ENV
Sbjct: 91 LPAPGEVDFLCGGPPCQGYSGMNRFNKGTWSLV--QNSMVMAYLSYADFYRPRYFLLENV 148
Query: 577 VDIVKFAKGLLGRYALARLIQMNY------------------QVRMGMMAAGAYGLPQFR 618
+ V K R L L+ M Y QVR G++ AG +G+ Q R
Sbjct: 149 RNFVSHNKSHAFRLTLRSLLDMGYQARLLISIPLALGIWECEQVRFGVLNAGNFGVSQSR 208
Query: 619 MRVFLWGAQPTEKLPPYALPT---HDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQD 675
R F+WG P +LP + P H L +P E V +G A L R + ++D
Sbjct: 209 KRTFIWGVAPDNELPQWPAPLHVFHSPQLTIKLPGGVEYTAV--PKGSGAPL-RTVTVKD 265
Query: 676 AISDLPSVDNYESRDEIPYDREPETEFQCFIR 707
AI DLP + N + +++ Y P + FQ IR
Sbjct: 266 AIGDLPPLTNGANLEDMQYAGPPISAFQKAIR 297
>gi|357516637|ref|XP_003628607.1| Cytosine-specific methyltransferase [Medicago truncatula]
gi|355522629|gb|AET03083.1| Cytosine-specific methyltransferase [Medicago truncatula]
Length = 171
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 75/164 (45%), Positives = 91/164 (55%), Gaps = 47/164 (28%)
Query: 204 EDYICKIVEMFEAVDGTPYFTAQWYYRARDTVIESNAHLIDQRRVFFSEIQNDNPLECLV 263
E I +EMFE+VDG +F AQWYYRA+DT LID +RVF+SE+Q+DNPL+CLV
Sbjct: 42 EGIIFVKLEMFESVDGELFFRAQWYYRAKDT-------LIDPKRVFYSEVQDDNPLDCLV 94
Query: 264 KKLNIARVPLNIDLEAKKLAIPHCDYYCDMMYLLPYSTFFSLPPENKRVSSETSSTISSD 323
KLNIAR+ LN IP SETSS +SSD
Sbjct: 95 GKLNIARLELN--------DIP----------------------------SETSSIVSSD 118
Query: 324 VDANECEVGEPQ----KMDVKLLDLYSGCGAMSTGLCLGANLAG 363
++ N K ++KLLDLYSGCGAMSTGLC G L+G
Sbjct: 119 IEVNGISELNTNIANTKPELKLLDLYSGCGAMSTGLCQGGILSG 162
>gi|290999391|ref|XP_002682263.1| cytosine-5 DNA methyltransferase [Naegleria gruberi]
gi|284095890|gb|EFC49519.1| cytosine-5 DNA methyltransferase [Naegleria gruberi]
Length = 1527
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 129/531 (24%), Positives = 236/531 (44%), Gaps = 86/531 (16%)
Query: 206 YICKIVEMFEAVDGTPYFTAQWYYRARDTVIES-----NAHLIDQRRVFFSEIQNDNPLE 260
YIC + FE G +W R +D I + N D + ++ ++ +DN ++
Sbjct: 751 YICMVDSFFENWKGQRQMRVRWLRRYQDIKILTTGEYHNVLCYDHQELYLTDEYDDNFIK 810
Query: 261 CLVKKLNIARVPLNIDLEAKKLAIPHCD-YYCD--MMYLLPYSTFFSLPPENKRVSSETS 317
+ + + V D E + + D +YC ++ + + L P+ + T
Sbjct: 811 NIKGRCAVFFVRKTEDFEKIEGSRDKKDIFYCKSKIVIVGEQISLLELSPQEIEL---TF 867
Query: 318 STISSDVDANECEVGEPQKMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEY 377
+ ++++A + + +K + LD++SGCG GL LG AG+++ +++++ +
Sbjct: 868 KCMENNLNAIKDQFIPKEK--ITALDIFSGCG----GLSLGLERAGIHV--KYSIEFWKP 919
Query: 378 ACQSLKLNHPETEVRNESAEDFLTLLREWEKLCISFSLIARKDPQQQLYSFNDDGESEED 437
A + + ++AE+FL ++ +L F L+ D + Q+
Sbjct: 920 AADTHHYYFKDCHTFCKNAEEFLKHIKVANELKKRFGLL---DKKCQIKG---------- 966
Query: 438 DDNGNVEDESEDDSEIFEVEKILKICYGDPKEIKKRGLYLKVRWRNYGPSEDTWEPIEGL 497
S + ++ + K K L+L V + +D W +E +
Sbjct: 967 ---------SPGKRRVIHIK--------NAKRKKDGSLWLMVEKQ----GQDLWMDVEKM 1005
Query: 498 SNCGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNP--LADEKNKQ 555
+ +I F++ + + +P P ++D+I GGPPCQG S NRF+ D+ L+ +KN+
Sbjct: 1006 DSYRAEIVHFLSTKYAN--IPAPDEIDLIAGGPPCQGFSLLNRFKETDSSKFLSHDKNRL 1063
Query: 556 LIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLP 615
++VF+D V + KPK+VL+ENV I+ + + +L Y+ + + A +GLP
Sbjct: 1064 VLVFLDYVKYFKPKYVLIENVTGILNTTVFDVPSAIIEKLDARGYEAKFSTVNAQHFGLP 1123
Query: 616 QFRMRVFLWGAQPTE--KLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAEL---ARK 670
Q R RV +GA+ E K+P + TH + + D Q +L RK
Sbjct: 1124 QTRTRVIFFGARKDENLKVPDFPKNTHAS----------HKVSAVLDNASQVKLVANVRK 1173
Query: 671 LL--------LQDAISDL-PSVDNYESRDE-IPYDREPETEFQCFIRLRKD 711
++ L+D ISDL P D+ ES E +P P+T +Q R D
Sbjct: 1174 IVAGPLPPVSLRDVISDLIPFEDSSESTAEYLP----PKTVYQKLYRKDSD 1220
>gi|23306234|emb|CAD43089.1| DNA methyltransferase 1e [Paracentrotus lividus]
Length = 1335
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 89/152 (58%), Gaps = 7/152 (4%)
Query: 499 NCGEKIKEFVTHGFKS----KILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNK 554
+C E ++ V G K+ + LP GDV+++CGGPPCQG SG NRF +++ + KN
Sbjct: 1183 DCNELLR-LVMQGEKTSRTGQKLPQKGDVELLCGGPPCQGFSGMNRFNSRE--YSKFKNS 1239
Query: 555 QLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGL 614
+ ++ D+ +P+F L+ENV + V + K ++ + AL LI+M YQ G++ AG YG+
Sbjct: 1240 LISSYLSYCDYYRPRFFLLENVRNFVSYKKNMVLKLALRCLIRMGYQCTFGILQAGQYGV 1299
Query: 615 PQFRMRVFLWGAQPTEKLPPYALPTHDVVLRG 646
PQ R R + A P EKLP Y P H R
Sbjct: 1300 PQTRRRAIILAAAPGEKLPFYPEPLHVFSTRA 1331
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 339 VKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAED 398
+K LD+++GCG +S G + AG+ + WA++ E A Q+ +LN+P + V ++ +
Sbjct: 1132 LKCLDVFAGCGGLSEGF----HQAGI-CESSWAIEKEEPAAQAYRLNNPGSTVFSDDCNE 1186
Query: 399 FLTLLREWEKLCISFSLIARKDPQQ 423
L L+ + EK S +K PQ+
Sbjct: 1187 LLRLVMQGEKT----SRTGQKLPQK 1207
>gi|208964726|gb|ACI31553.1| MET1 [Nicotiana benthamiana]
Length = 227
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 77/122 (63%), Gaps = 2/122 (1%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LPLPG VD I GGPPCQG SG NRF + + + + ++ F+ D+ +PK+ L+ENV
Sbjct: 108 LPLPGQVDFINGGPPCQGFSGMNRF--NQSTWSKVQCEMILAFLSFADYYRPKYFLLENV 165
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F + R +A L++M YQVR G++ AGA+G+PQ R R F+W A P E LP +
Sbjct: 166 RNFVSFNQKQTFRLTVASLLEMGYQVRFGILEAGAFGVPQSRKRAFIWAASPEEILPEWP 225
Query: 637 LP 638
P
Sbjct: 226 EP 227
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 5/66 (7%)
Query: 335 QKMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNE 394
Q+ + LD+++GCG +S GL +G++ T+WA++ E A + KLNHPE EV +
Sbjct: 14 QQNRLATLDIFAGCGGLSEGL----QRSGVS-DTKWAIEYEEPAGDAFKLNHPEAEVFIQ 68
Query: 395 SAEDFL 400
+ FL
Sbjct: 69 NCNVFL 74
>gi|297604073|ref|NP_001054957.2| Os05g0224800 [Oryza sativa Japonica Group]
gi|57863807|gb|AAW56861.1| unknow protein [Oryza sativa Japonica Group]
gi|255676144|dbj|BAF16871.2| Os05g0224800 [Oryza sativa Japonica Group]
Length = 304
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 56/101 (55%), Positives = 71/101 (70%)
Query: 607 MAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAE 666
MAAG YGLPQFRMRVFL G EKLPP+ LPTH+ +++ P FERN V + +
Sbjct: 1 MAAGCYGLPQFRMRVFLLGCHSKEKLPPFPLPTHEAIVKNGCPLAFERNLVGWPNDTPMQ 60
Query: 667 LARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQCFIR 707
LAR ++L+D +SDLP V N ESRDE+ Y + P+TEFQ +IR
Sbjct: 61 LARPIVLEDILSDLPEVANGESRDEMLYVKGPQTEFQRYIR 101
>gi|270015149|gb|EFA11597.1| DNA methyltransferase 1 [Tribolium castaneum]
Length = 1882
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 108/191 (56%), Gaps = 7/191 (3%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP +V++I GGPPCQG SG NRF + L KN ++ + + D+ +P ++ENV
Sbjct: 819 LPPKSEVEMIVGGPPCQGFSGMNRFNEGEYSLF--KNSLVVSLLSLCDYYRPLIFVLENV 876
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ + + GL+ + L L+ + YQVR+ ++ AG +G+PQ R R L + P +LP
Sbjct: 877 RNFMLYKGGLILKLTLQCLVAIGYQVRISIVEAGEFGVPQARRRFILIASAPGYQLPRIP 936
Query: 637 LPTHDVVLRGVIPTEFERNTVAYDEGQ---QAELARKLLLQDAISDLPSVDNYESRDEIP 693
P H + RG + + V Y G Q+ R L ++DAI+DLP++++ ++R ++P
Sbjct: 937 EPQHVFLQRGS-RLDIYVDGVKYTNGNFWTQSAPYRMLHVRDAIADLPAIEHDDNRPQMP 995
Query: 694 Y-DREPETEFQ 703
Y D E + FQ
Sbjct: 996 YDDDEGTSHFQ 1006
>gi|322792109|gb|EFZ16181.1| hypothetical protein SINV_14765 [Solenopsis invicta]
Length = 298
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/124 (45%), Positives = 77/124 (62%), Gaps = 2/124 (1%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP G+V++ICGGPPCQG SG NRF ++ L KN ++ F+ D+ KPKF +MENV
Sbjct: 138 LPQKGEVELICGGPPCQGFSGMNRFNSRQYSLF--KNSLVVSFLSYCDYYKPKFFIMENV 195
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ KG++ + L L++M YQ G++ AG+YG+PQ R R+ L A P E LP Y
Sbjct: 196 RNFTSCKKGMVLKLTLRCLVRMGYQCTFGILQAGSYGVPQTRKRMILIAAAPGEILPNYP 255
Query: 637 LPTH 640
P H
Sbjct: 256 EPMH 259
>gi|189233760|ref|XP_001814230.1| PREDICTED: similar to DNA (cytosine-5-)-methyltransferase
[Tribolium castaneum]
Length = 1187
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 108/191 (56%), Gaps = 7/191 (3%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP +V++I GGPPCQG SG NRF + L KN ++ + + D+ +P ++ENV
Sbjct: 801 LPPKSEVEMIVGGPPCQGFSGMNRFNEGEYSLF--KNSLVVSLLSLCDYYRPLIFVLENV 858
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ + + GL+ + L L+ + YQVR+ ++ AG +G+PQ R R L + P +LP
Sbjct: 859 RNFMLYKGGLILKLTLQCLVAIGYQVRISIVEAGEFGVPQARRRFILIASAPGYQLPRIP 918
Query: 637 LPTHDVVLRGVIPTEFERNTVAYDEGQ---QAELARKLLLQDAISDLPSVDNYESRDEIP 693
P H + RG + + V Y G Q+ R L ++DAI+DLP++++ ++R ++P
Sbjct: 919 EPQHVFLQRGS-RLDIYVDGVKYTNGNFWTQSAPYRMLHVRDAIADLPAIEHDDNRPQMP 977
Query: 694 Y-DREPETEFQ 703
Y D E + FQ
Sbjct: 978 YDDDEGTSHFQ 988
>gi|159474758|ref|XP_001695492.1| cytosine-C5 specific DNA methyltransferase [Chlamydomonas
reinhardtii]
gi|158275975|gb|EDP01750.1| cytosine-C5 specific DNA methyltransferase [Chlamydomonas
reinhardtii]
Length = 1663
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 106/233 (45%), Gaps = 44/233 (18%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP PG VD++ GGPPCQG SG NR + + K + ++ DFL+P++ L+ENV
Sbjct: 1198 LPGPGAVDLLVGGPPCQGFSGMNRDNGSEGSVL--KKSMIKAYLSYADFLRPRYFLLENV 1255
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ G R AL L+ M YQVR+G++ A +G+PQ R R F+W A P E+LP +
Sbjct: 1256 RNFAAHEGGRYFRLALRSLLDMGYQVRVGVLNAAHHGVPQSRSRTFIWAALPGERLPHWP 1315
Query: 637 LPTH---DVVLRGVIPTEF----ERNTVAYDEGQQAELA--------------------- 668
P H +L +P + VA + A +
Sbjct: 1316 QPLHAFDHTMLSLPVPVPAWVLEHPDCVAALQRDNANVTVQDRGGRGDGGGEGVATLRYW 1375
Query: 669 -----------RKLLLQDAISDLPSVDNYESRD---EIPYDREPETEFQCFIR 707
R + + DA+SDL VDN + D PY P+T FQ IR
Sbjct: 1376 AASPAAGGAPLRPVTVWDAVSDLAPVDNADGNDWRRVAPYGSAPQTPFQRAIR 1428
>gi|341868911|gb|AEK98579.1| chromomethyltransferase 1a2 [Vitis amurensis]
gi|341868913|gb|AEK98580.1| chromomethyltransferase 1a3 [Vitis amurensis]
Length = 70
Score = 117 bits (293), Expect = 2e-23, Method: Composition-based stats.
Identities = 51/70 (72%), Positives = 60/70 (85%)
Query: 535 VSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALAR 594
VSGFNRFRN + PL D KN QL+VFMDIV++LKPK+VLMENVVDI+KFA G LGRYA+ R
Sbjct: 1 VSGFNRFRNTEAPLDDPKNHQLVVFMDIVNYLKPKYVLMENVVDILKFAGGFLGRYAMGR 60
Query: 595 LIQMNYQVRM 604
L+ MNYQ R+
Sbjct: 61 LVSMNYQARL 70
>gi|304441893|gb|ADM34182.1| DNA methyltransferase 1 [Aplysia californica]
Length = 405
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 97/178 (54%), Gaps = 4/178 (2%)
Query: 532 CQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYA 591
CQG SG NRF +++ + KN + ++ D+ +P+F L+ENV + V F + ++ + A
Sbjct: 1 CQGFSGMNRFNSRE--YSKFKNSLIASYLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLA 58
Query: 592 LARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTE 651
L L++M YQ G++ AG+YG+ Q R R + A P EKLP Y P H R + +
Sbjct: 59 LRCLVRMGYQCTFGVLQAGSYGVAQTRRRAIILAAAPGEKLPVYPEPQHTFAPRAMQLSV 118
Query: 652 F--ERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQCFIR 707
+R + + + R + ++DA+SDLP + N +EI Y + +T FQ IR
Sbjct: 119 MVDDRKFNSNIKNMTSTPYRTITVRDAMSDLPEIKNGAKAEEISYKGDAQTHFQRLIR 176
>gi|326454730|gb|ADZ74246.1| chromomethyltransferase 1a1 [Vitis amurensis]
Length = 70
Score = 112 bits (281), Expect = 6e-22, Method: Composition-based stats.
Identities = 50/70 (71%), Positives = 59/70 (84%)
Query: 535 VSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALAR 594
VSGFNRFRN + L D KN QL+VFMDIV++LKPK+VLMENVVDI+KFA G LGRYA+ R
Sbjct: 1 VSGFNRFRNTEASLDDPKNHQLVVFMDIVNYLKPKYVLMENVVDILKFAGGFLGRYAMGR 60
Query: 595 LIQMNYQVRM 604
L+ MNYQ R+
Sbjct: 61 LVFMNYQARL 70
>gi|89243223|gb|ABD64771.1| Met1 [Volvox carteri f. nagariensis]
Length = 2262
Score = 112 bits (280), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 76/127 (59%), Gaps = 2/127 (1%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP PG V ++ GGPPCQG SG NRF NK + +N ++ ++ DF +P++ L+ENV
Sbjct: 1832 LPTPGSVALMMGGPPCQGYSGMNRF-NK-GLWSQVQNSMVMAYLSYCDFYRPRYFLLENV 1889
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ + G + R + L+ + YQVR G++ AG +G+PQ R R F+W A P E LP +
Sbjct: 1890 RNFAVYRGGEVFRLVVRTLLDLGYQVRFGILNAGHFGVPQSRKRTFIWAALPGEVLPEWP 1949
Query: 637 LPTHDVV 643
P H V
Sbjct: 1950 TPRHVFV 1956
Score = 42.4 bits (98), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 43/69 (62%), Gaps = 6/69 (8%)
Query: 323 DVDANECEVGEPQKMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSL 382
DV+A E G + + + LD+++GCG +S G+ + AG+ TRWA++ + A ++
Sbjct: 1727 DVEAAVHEDGG-EGIQLDTLDIFAGCGGLSEGM----HQAGVAR-TRWAIEYDSEAAEAY 1780
Query: 383 KLNHPETEV 391
KLN+P+ +V
Sbjct: 1781 KLNNPDAKV 1789
>gi|302836690|ref|XP_002949905.1| maintenance DNA methyltransferase [Volvox carteri f. nagariensis]
gi|300264814|gb|EFJ49008.1| maintenance DNA methyltransferase [Volvox carteri f. nagariensis]
Length = 2277
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 76/127 (59%), Gaps = 2/127 (1%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP PG V ++ GGPPCQG SG NRF NK + +N ++ ++ DF +P++ L+ENV
Sbjct: 1847 LPTPGSVALMMGGPPCQGYSGMNRF-NK-GLWSQVQNSMVMAYLSYCDFYRPRYFLLENV 1904
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ + G + R + L+ + YQVR G++ AG +G+PQ R R F+W A P E LP +
Sbjct: 1905 RNFAVYRGGEVFRLVVRTLLDLGYQVRFGILNAGHFGVPQSRKRTFIWAALPGEVLPEWP 1964
Query: 637 LPTHDVV 643
P H V
Sbjct: 1965 TPRHVFV 1971
Score = 42.4 bits (98), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 43/69 (62%), Gaps = 6/69 (8%)
Query: 323 DVDANECEVGEPQKMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSL 382
DV+A E G + + + LD+++GCG +S G+ + AG+ TRWA++ + A ++
Sbjct: 1742 DVEAAVHEDGG-EGIQLDTLDIFAGCGGLSEGM----HQAGVAR-TRWAIEYDSEAAEAY 1795
Query: 383 KLNHPETEV 391
KLN+P+ +V
Sbjct: 1796 KLNNPDAKV 1804
>gi|241997518|ref|XP_002433408.1| DNA (cytosine-5)-methyltransferase, putative [Ixodes scapularis]
gi|215490831|gb|EEC00472.1| DNA (cytosine-5)-methyltransferase, putative [Ixodes scapularis]
Length = 414
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 103/204 (50%), Gaps = 24/204 (11%)
Query: 513 KSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVL 572
K + P G+VD +CGGPPCQG S NR R N + KN + + + D+ +P+F L
Sbjct: 71 KGQRFPKKGEVDFLCGGPPCQGYSLLNRHRGNWN--SRLKNSLVSTLLSLCDYYRPRFFL 128
Query: 573 MENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKL 632
MENV + KGL+ + L L+++ YQ G++ AG+YGLPQ R R+ + A P E L
Sbjct: 129 MENVKSFISEEKGLVMQLTLQSLLRLGYQCCFGVLQAGSYGLPQDRKRLVILAAAPGELL 188
Query: 633 PPYALPTHDVVLRGVIPTEFERNTVAYDEGQQ---------AELARKLLLQDAISDLPSV 683
P + P T F N +G++ + R + L+DAISDL S+
Sbjct: 189 PKFPEPK----------TSFPSNNFVTVKGKKFGPTTTWCTSAPLRTVTLRDAISDLASL 238
Query: 684 DNYESRDEIPYDREPETEFQCFIR 707
+ +S EP + +Q ++
Sbjct: 239 EPSDSASSF---SEPMSCYQRMLK 259
>gi|2952281|gb|AAC05486.1| chromomethylase [Sedum obtusatum]
Length = 62
Score = 110 bits (274), Expect = 4e-21, Method: Composition-based stats.
Identities = 48/62 (77%), Positives = 58/62 (93%)
Query: 536 SGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARL 595
SGFNRFRNK+NPL D KN+Q+IV+MDIV++LKP+FVLMENVVDI+K ++G LGRYALARL
Sbjct: 1 SGFNRFRNKENPLEDTKNEQIIVYMDIVNYLKPRFVLMENVVDILKLSQGFLGRYALARL 60
Query: 596 IQ 597
IQ
Sbjct: 61 IQ 62
>gi|440794374|gb|ELR15535.1| C5 cytosine-specific DNA methylase superfamily protein [Acanthamoeba
castellanii str. Neff]
Length = 1562
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 104/235 (44%), Gaps = 39/235 (16%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP G ++ I GPPCQG +G NRF D+ L N + + VDF +P + L+ENV
Sbjct: 1150 LPPKGAINFIYCGPPCQGFTGMNRFPKADDVL----NSLIATTLSCVDFYRPTYFLLENV 1205
Query: 577 VDIVKFAKG-------------LLG--RYALARLIQMNYQVRMGMMAAGAYGLPQFRMRV 621
+V F G LG ++ L L M YQ R + AG YG+PQ R R
Sbjct: 1206 RGMVDFKLGGVQETKARMSGGIKLGVVKFILRALTAMGYQARFSLQQAGMYGVPQSRRRF 1265
Query: 622 FLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDE-GQQAELARKLLLQDAISDL 680
F+WG LP + PTH G + V + ++ R + + +AISDL
Sbjct: 1266 FIWGVLRGHTLPQFPQPTHTFPKPGSLSMLLPNVGVRLEPVTARSAPHRYISVSEAISDL 1325
Query: 681 PSV-------------------DNYESRDEIPYDREPETEFQCFIRLRKDGKKLW 716
P+ D + + YD EPE++FQ +R R KKL+
Sbjct: 1326 PAFEYDEPEEPKDERSRSGPHKDKWIGSEVREYDAEPESDFQKAMRRRTKDKKLY 1380
>gi|2952287|gb|AAC05489.1| chromomethylase [Quercus palustris]
Length = 62
Score = 108 bits (269), Expect = 1e-20, Method: Composition-based stats.
Identities = 48/61 (78%), Positives = 55/61 (90%)
Query: 536 SGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARL 595
SGFNRFRNK+NPL DEKNKQLIV+M++V LKP++VLMENVVD+VKFA G LGRYAL RL
Sbjct: 1 SGFNRFRNKENPLDDEKNKQLIVYMNLVQHLKPRYVLMENVVDLVKFANGFLGRYALGRL 60
Query: 596 I 596
I
Sbjct: 61 I 61
>gi|357516639|ref|XP_003628608.1| Cytosine-specific methyltransferase [Medicago truncatula]
gi|355522630|gb|AET03084.1| Cytosine-specific methyltransferase [Medicago truncatula]
Length = 159
Score = 108 bits (269), Expect = 2e-20, Method: Composition-based stats.
Identities = 62/168 (36%), Positives = 83/168 (49%), Gaps = 52/168 (30%)
Query: 437 DDDNGNVEDESEDDSEIFEVEKILKICYGDPKEIKKRGLYLKVRWRNYGPSEDTWEPIEG 496
DD+ G E+ E EIFEV K++ + Y DPK+ K GLY KV W+ Y
Sbjct: 19 DDNTGPEENNGE---EIFEVPKVIDMRYNDPKKEDKHGLYFKVFWKGYDS---------- 65
Query: 497 LSNCGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQL 556
G DV+CGGPPCQG+ +K
Sbjct: 66 ------------------------GVEDVVCGGPPCQGI---------------KKQTTS 86
Query: 557 IVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRM 604
+ F+ IV +L+PKF LMENVVD++KF+ G L RYAL RL+QM+Y+ +
Sbjct: 87 LFFIHIVHYLRPKFTLMENVVDLLKFSYGFLVRYALGRLVQMSYRSHL 134
>gi|341868919|gb|AEK98583.1| chromomethyltransferase 3a1 [Vitis amurensis]
Length = 70
Score = 107 bits (268), Expect = 2e-20, Method: Composition-based stats.
Identities = 45/70 (64%), Positives = 59/70 (84%)
Query: 535 VSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALAR 594
+SG+NRFRN D+PL+DE+N Q+++FMDIV FLKPK+VLMENVVD++K K LGRYA++R
Sbjct: 1 ISGYNRFRNVDSPLSDERNHQIVIFMDIVKFLKPKYVLMENVVDLLKLDKASLGRYAISR 60
Query: 595 LIQMNYQVRM 604
L M YQ R+
Sbjct: 61 LGHMKYQARL 70
>gi|336379961|gb|EGO21115.1| hypothetical protein SERLADRAFT_417509 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1251
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 91/187 (48%), Gaps = 23/187 (12%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
+P PGDVD I GGPPCQ SG N ++ + D ++ + + V+F +P + L+ENV
Sbjct: 841 MPKPGDVDFIYGGPPCQSFSGINHWKKAN----DIRSTLICNMLSYVEFYRPSYFLLENV 896
Query: 577 VDIVKF-AKGLL-GR------------YALARLIQMNYQVRMGMMAAGAYGLPQFRMRVF 622
I+ + KG + GR + L L + YQ+R ++ AG YG PQ R RV
Sbjct: 897 TGILNYRLKGRMEGRSTVDGIEMGVVKFILRSLAALGYQIRFNVLQAGQYGAPQGRQRVI 956
Query: 623 LWGAQPTEKLPPYALPTHDVVLRGV---IPTEFERNTVAYD--EGQQAELARKLLLQDAI 677
WGA+ LP +PTH V R T R T + D + R + + DAI
Sbjct: 957 FWGAKRGLLLPELPIPTHGFVSRNYKVSTGTRLPRMTRSKDPTDDHLCSPFRAVTINDAI 1016
Query: 678 SDLPSVD 684
DLP D
Sbjct: 1017 GDLPGFD 1023
>gi|432099546|gb|ELK28687.1| DNA (cytosine-5)-methyltransferase 1 [Myotis davidii]
Length = 1604
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 114/224 (50%), Gaps = 18/224 (8%)
Query: 489 DTWEPIEG---LSNCGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKD 545
+ W+P L+N G + E VT+ K LP GDV+++CGGPPCQG SG NRF ++
Sbjct: 1169 EMWDPAAQAFRLNNPGSTVLE-VTNSLGQK-LPQKGDVEMLCGGPPCQGFSGMNRFNSRT 1226
Query: 546 NPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMG 605
+ KN ++ F+ D+ +P++ L+ENV + V F + ++ + L L++M YQ G
Sbjct: 1227 --YSKFKNSLVVSFLSYCDYYRPRYFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFG 1284
Query: 606 MMAA-GAYGLPQ-FRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQ 663
++ G P + F G+ ++++ V+R R+ + Y
Sbjct: 1285 VLQGDGCEAAPTPVKPAAFREGSASSQEMA--------TVIRWTAAVCVPRSAMLYCRLS 1336
Query: 664 QAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQCFIR 707
R + ++D +SDLP + N S EI Y+ EP++ FQ +R
Sbjct: 1337 SCPF-RTITVRDTMSDLPEIRNGASALEISYNGEPQSWFQRQLR 1379
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 12/96 (12%)
Query: 303 FSLPPENKRVSSETSSTISSDVDANECEVGEPQ--KMDVKL-----LDLYSGCGAMSTGL 355
F PP + R + + EP+ K+D++L LD++SGCG +S G
Sbjct: 1097 FEDPPNHARSPGNKGKGKGKGKGRPKSQTSEPKEPKVDIQLPKLRTLDVFSGCGGLSEGF 1156
Query: 356 CLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEV 391
+ AG++ T WA+++ + A Q+ +LN+P + V
Sbjct: 1157 ----HQAGISQ-TLWAIEMWDPAAQAFRLNNPGSTV 1187
>gi|2956677|emb|CAB09661.1| DNA-C5-methyltransferase [Ascobolus immersus]
Length = 1336
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 96/182 (52%), Gaps = 24/182 (13%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP G+VD I GGPPCQG SG NR++ + D KN + F+ VD KP+FVL+ENV
Sbjct: 866 LPKKGEVDFIYGGPPCQGFSGVNRYKKGN----DIKNSLVATFLSYVDHYKPRFVLLENV 921
Query: 577 VDIV------------KFAKGL---LGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRV 621
++ K+ G+ + ++ LI MNYQ R+G++ +G YG+PQ R RV
Sbjct: 922 KGLITTKLGNSKNAEGKWEGGISNGVVKFIYRTLISMNYQCRIGLVQSGEYGVPQSRPRV 981
Query: 622 FLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELA--RKLLLQDAISD 679
A+ E+LP P H V+ +++ + Q +A ++ + +A+SD
Sbjct: 982 IFLAARMGERLPDLPEPMHAF---EVLDSQYALPHIKRYHTTQNGVAPLPRITIGEAVSD 1038
Query: 680 LP 681
LP
Sbjct: 1039 LP 1040
Score = 46.6 bits (109), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 39/63 (61%), Gaps = 5/63 (7%)
Query: 339 VKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAED 398
+K LD+++GCG GL LG +L+G + T+WA++ A +L LN P+ +V N+ A
Sbjct: 784 LKGLDIFAGCG----GLTLGLDLSGA-VDTKWAIEFAPSAANTLALNFPDAQVFNQCANV 838
Query: 399 FLT 401
L+
Sbjct: 839 LLS 841
>gi|2906004|gb|AAC03766.1| C5-DNA-methyltransferase [Ascobolus immersus]
Length = 1356
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 96/182 (52%), Gaps = 24/182 (13%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP G+VD I GGPPCQG SG NR++ + D KN + F+ VD KP+FVL+ENV
Sbjct: 866 LPKKGEVDFIYGGPPCQGFSGVNRYKKGN----DIKNSLVATFLSYVDHYKPRFVLLENV 921
Query: 577 VDIV------------KFAKGL---LGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRV 621
++ K+ G+ + ++ LI MNYQ R+G++ +G YG+PQ R RV
Sbjct: 922 KGLITTKLGNSKNAEGKWEGGISNGVVKFIYRTLISMNYQCRIGLVQSGEYGVPQSRPRV 981
Query: 622 FLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELA--RKLLLQDAISD 679
A+ E+LP P H V+ +++ + Q +A ++ + +A+SD
Sbjct: 982 IFLAARMGERLPDLPEPMHAF---EVLDSQYALPHIKRYHTTQNGVAPLPRITIGEAVSD 1038
Query: 680 LP 681
LP
Sbjct: 1039 LP 1040
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 5/63 (7%)
Query: 339 VKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAED 398
+K LD+++GCG GL LG +L+G + T+W ++ A +L LN P+ +V N+ A
Sbjct: 784 LKGLDIFAGCG----GLTLGLDLSG-AVDTKWDIEFAPSAANTLALNFPDAQVFNQCANV 838
Query: 399 FLT 401
L+
Sbjct: 839 LLS 841
>gi|449268905|gb|EMC79734.1| DNA (cytosine-5)-methyltransferase 1, partial [Columba livia]
Length = 1252
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 97/193 (50%), Gaps = 16/193 (8%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P+F L+ENV
Sbjct: 867 LPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRPRFFLLENV 924
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRM-RVFLWGAQPTEKLP-P 634
+ V F + ++ + L L++M YQ G++ GA + R W + P P
Sbjct: 925 RNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQVGAATPRDAELGRKPFWAPPGSVAAPRP 984
Query: 635 YALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPY 694
+ + V P + + R + ++D +SDLP + N S EI Y
Sbjct: 985 SGVTIGALTAPRVPPRTY------------SGPFRTITVRDTMSDLPEIRNGASALEISY 1032
Query: 695 DREPETEFQCFIR 707
+ EP++ FQ IR
Sbjct: 1033 NGEPQSWFQRQIR 1045
>gi|357477891|ref|XP_003609231.1| Cytosine-specific methyltransferase [Medicago truncatula]
gi|355510286|gb|AES91428.1| Cytosine-specific methyltransferase [Medicago truncatula]
Length = 569
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 98/170 (57%), Gaps = 23/170 (13%)
Query: 210 IVEMFEAVDGTPYFTAQWYYRARDTVIESNAHLIDQRRVFFSEIQNDNPLECLVKKLNIA 269
IVE+FE+ D YFTAQW+YRA DTVI+ + +L D++R+F S+++++NPL+CLVKK+ I
Sbjct: 48 IVELFESHDKEYYFTAQWFYRAEDTVIKDHGNLFDKKRIFKSDVKDENPLDCLVKKVGIV 107
Query: 270 RVPLNIDLEAKKLAIPHCDYYCDMMYLLPYSTFFSL---PPE---------------NKR 311
R+ + AKK IP ++Y DM Y +PY TF ++ P N R
Sbjct: 108 RISPDAS-AAKKKKIPPSEFYFDMKYTVPYLTFSNIDNAPARIESETSTLSSESGILNFR 166
Query: 312 VSSETSSTISSDVDANECEV--GEPQKMDVKLLDLYSGCGAM-STGLCLG 358
+ I S + + + G P +++ +L +Y CG++ S GLC+G
Sbjct: 167 IWYLRGHVIFSSKERHCLDYSPGYPTSLEI-MLAIYQPCGSIFSAGLCIG 215
>gi|336367242|gb|EGN95587.1| hypothetical protein SERLA73DRAFT_76683 [Serpula lacrymans var.
lacrymans S7.3]
Length = 1285
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 91/189 (48%), Gaps = 25/189 (13%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
+P PGDVD I GGPPCQ SG N ++ + D ++ + + V+F +P + L+ENV
Sbjct: 893 MPKPGDVDFIYGGPPCQSFSGINHWKKAN----DIRSTLICNMLSYVEFYRPSYFLLENV 948
Query: 577 VDIVKF-AKGLL-GR------------YALARLIQMNYQVRMGM--MAAGAYGLPQFRMR 620
I+ + KG + GR + L L + YQ+R + + AG YG PQ R R
Sbjct: 949 TGILNYRLKGRMEGRSTVDGIEMGVVKFILRSLAALGYQIRFNVLQLQAGQYGAPQGRQR 1008
Query: 621 VFLWGAQPTEKLPPYALPTHDVVLRGV---IPTEFERNTVAYD--EGQQAELARKLLLQD 675
V WGA+ LP +PTH V R T R T + D + R + + D
Sbjct: 1009 VIFWGAKRGLLLPELPIPTHGFVSRNYKVSTGTRLPRMTRSKDPTDDHLCSPFRAVTIND 1068
Query: 676 AISDLPSVD 684
AI DLP D
Sbjct: 1069 AIGDLPGFD 1077
>gi|351700800|gb|EHB03719.1| DNA (cytosine-5)-methyltransferase 1 [Heterocephalus glaber]
Length = 1601
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 94/191 (49%), Gaps = 22/191 (11%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P+F L+ENV
Sbjct: 1216 LPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRPRFFLLENV 1273
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F + ++ + L L++M YQ G++ G P + +
Sbjct: 1274 RNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQVPV-------------GVPPRQHVLCCC 1320
Query: 637 LPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDR 696
L + GV P F + R + ++D +SDLP + N S EI Y+
Sbjct: 1321 LGSRAGQSGGVSPALFRPRL-------SSAPFRTITVRDTMSDLPEIRNGASAPEIAYNG 1373
Query: 697 EPETEFQCFIR 707
EP++ FQ +R
Sbjct: 1374 EPQSWFQRQLR 1384
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 51/111 (45%), Gaps = 12/111 (10%)
Query: 300 STFFSLPPENKRVSSETSSTISSDVDANECEVGEP----QKMDV---KLLDLYSGCGAMS 352
S F PP + R + + EP Q +D+ + LD++SGCG +S
Sbjct: 1098 SKTFEDPPNHARSPGNKGKGKGKGKGKTKSQALEPSEPEQAIDLPKLRTLDVFSGCGGLS 1157
Query: 353 TGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLL 403
G + AG+ T WA+++ E A Q+ +LN+P + V E L L+
Sbjct: 1158 EGF----HQAGI-CETLWAIEMWEPAAQAFRLNNPGSTVFTEDCNVLLKLV 1203
>gi|6273357|gb|AAF06333.1| DNA methyltransferase 1 [Xenopus laevis]
Length = 373
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 86/160 (53%), Gaps = 6/160 (3%)
Query: 552 KNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGA 611
KN ++ ++ D+ +PKF L+ENV + V F ++ + L L++M YQ G++ AG
Sbjct: 2 KNSLVVSYLSYCDYYRPKFFLLENVRNFVSFKSSMVLKLTLRCLVRMGYQCTFGVLQAGQ 61
Query: 612 YGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLR----GVIPTEFERNTVAYDEGQQAEL 667
YG+ Q R R + A P EKLP + P H R GVI E+ V+ + L
Sbjct: 62 YGVAQTRRRAIVLAAAPGEKLPMFPEPLHVFAPRACSLGVIVD--EKKYVSNITRTSSSL 119
Query: 668 ARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQCFIR 707
R + ++D +SDLP + N S EI Y+ EP++ FQ IR
Sbjct: 120 FRTITVRDTMSDLPEIRNGASALEISYNGEPQSWFQRQIR 159
>gi|2952285|gb|AAC05488.1| chromomethylase [Gaultheria shallon]
Length = 62
Score = 100 bits (248), Expect = 3e-18, Method: Composition-based stats.
Identities = 46/61 (75%), Positives = 52/61 (85%)
Query: 536 SGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARL 595
SGFNRFRN PL D KN+QLIVFMDIV+FLKP+FVLMENVVDI K A G+LG YA+ARL
Sbjct: 1 SGFNRFRNVTEPLKDPKNQQLIVFMDIVEFLKPRFVLMENVVDIFKLAGGVLGCYAIARL 60
Query: 596 I 596
+
Sbjct: 61 V 61
>gi|2952277|gb|AAC05484.1| chromomethylase CMT2 [Brassica oleracea var. italica]
Length = 62
Score = 99.4 bits (246), Expect = 6e-18, Method: Composition-based stats.
Identities = 43/61 (70%), Positives = 56/61 (91%)
Query: 536 SGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARL 595
SG+NRFR+ D+PL DE+N+Q++VFMDIV++LKPKFVLMENVVDI++ KG LGRYAL+RL
Sbjct: 1 SGYNRFRDVDSPLTDERNQQIVVFMDIVEYLKPKFVLMENVVDILRLDKGSLGRYALSRL 60
Query: 596 I 596
+
Sbjct: 61 V 61
>gi|242217704|ref|XP_002474649.1| predicted protein [Postia placenta Mad-698-R]
gi|220726179|gb|EED80137.1| predicted protein [Postia placenta Mad-698-R]
Length = 1157
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 85/181 (46%), Gaps = 21/181 (11%)
Query: 518 PLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVV 577
P PG +D I G PCQ S N F+ D D K+ ++ + V+FL+P+F L ENV
Sbjct: 767 PTPGQIDCIIAGFPCQPHSQLNMFQRAD----DRKSHLILNLLSWVNFLQPRFCLFENVR 822
Query: 578 DIVKFAKGLL--GRY-------------ALARLIQMNYQVRMGMMAAGAYGLPQFRMRVF 622
+ + GRY + L+ MNYQVR ++ A YG PQ R+R F
Sbjct: 823 GFLSYNLNATQAGRYRVEGGIKMGGLKFLVHSLLAMNYQVRFALLQAAHYGTPQSRIRFF 882
Query: 623 LWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELA--RKLLLQDAISDL 680
L A+ LP + PTHD L+ + EF +A Q + + DAISDL
Sbjct: 883 LIAARSGHPLPAFPQPTHDFPLKDSLKLEFTNKGIARPIWTQNGTVPHNYVSVDDAISDL 942
Query: 681 P 681
P
Sbjct: 943 P 943
>gi|402224966|gb|EJU05028.1| S-adenosyl-L-methionine-dependent methyltransferase [Dacryopinax sp.
DJM-731 SS1]
Length = 1321
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 86/179 (48%), Gaps = 28/179 (15%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP PGD D+I GPPCQG S N +R D D KN + + VD+ +P+F L+ENV
Sbjct: 923 LPNPGDPDIIICGPPCQGYSVLNSYRRTD----DIKNTLVANALSYVDYFRPRFFLLENV 978
Query: 577 VDIV--------------KFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVF 622
++ + + + ++ + L YQVR+ ++ AG +G+ Q R RVF
Sbjct: 979 QPLLNSRGKVLKPGDIDERIIENAVRKFIVRFLTARGYQVRVTVLQAGEFGVAQHRARVF 1038
Query: 623 LWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLP 681
W A+ E LP + LPTH + R T + + + ++D I DLP
Sbjct: 1039 FWAAKRNEALPEFPLPTH----------TWARTTPSRRDALGGAPLPCVTVKDVIGDLP 1087
>gi|409045787|gb|EKM55267.1| hypothetical protein PHACADRAFT_184079 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1376
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 96/200 (48%), Gaps = 37/200 (18%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
+P PG+VD I GGPPCQG S N R D D +N + + V+F PKF ++ENV
Sbjct: 943 MPRPGEVDFIYGGPPCQGFSRMNHSRTVD----DYRNTLVCNMLSYVEFYHPKFFMLENV 998
Query: 577 VDIV-------------KFAKGL---LGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMR 620
I+ K G+ + + L L + YQV ++ AG YG PQ R+R
Sbjct: 999 EGILYHPLAATQSGPGRKMEGGVRMGVVKLILRTLTSLGYQVHFKLLQAGQYGAPQSRLR 1058
Query: 621 VFLWGAQPTEKLPPYALPTH----DV---------VLRG---VIPTEFERNTVAYDEGQQ 664
V GAQ LP + +PTH DV +LR +IP E +++ V Q
Sbjct: 1059 VIFLGAQRGLPLPSFPIPTHCTADDVQQIKLVTGNLLRPAVRIIPFE-DKDVVNRKAWLQ 1117
Query: 665 AELARKLLLQDAISDLPSVD 684
++ ++DAISDLP D
Sbjct: 1118 FAPHLRVSVEDAISDLPKFD 1137
>gi|440637271|gb|ELR07190.1| hypothetical protein GMDG_02417 [Geomyces destructans 20631-21]
Length = 1233
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 90/186 (48%), Gaps = 32/186 (17%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADE-KNKQLIVFMDIVDFLKPKFVLMEN 575
+P GD+D + GGPPCQ SG NR P A+ KN L F+ VD +PK+ L+EN
Sbjct: 805 MPKRGDIDFLYGGPPCQDFSGCNRC-----PKANSIKNSLLTTFLSFVDHYRPKYFLLEN 859
Query: 576 VVDIV---------KFAKGLLG-------RYALARLIQMNYQVRMGMMAAGAYGLPQFRM 619
V ++ K G+ G ++ L L + Y + M+ A +G PQ R
Sbjct: 860 VRGLLQHRLGSTQKKSGPGVQGGIQQGSVKFILRALTSLGYSAQFHMLQAAEHGAPQSRR 919
Query: 620 RVFLWGAQPTEKLPPYALPTHDVVLRGV-IPTEFERNTVAYDEGQQAELARKLLLQDAIS 678
RVF WGA KLP Y PTH V +G+ PT + G A + + DAIS
Sbjct: 920 RVFFWGALLGRKLPLYPQPTH--VCKGLSAPTN------TFTMGSTAP-HNPVTVGDAIS 970
Query: 679 DLPSVD 684
DLP+ D
Sbjct: 971 DLPAFD 976
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 15/86 (17%)
Query: 324 VDANECEVGEPQK---------MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDI 374
VD NE VG +K + ++ +D+++GCG +S+GL G + L + W +D
Sbjct: 700 VDGNEM-VGMEEKRHETFSKAGLKLRAMDVFAGCGGLSSGLHEGGAVETLYGI-EWDID- 756
Query: 375 NEYACQSLKLNHPETEVRNESAEDFL 400
A ++LK N P +V NE+A L
Sbjct: 757 ---ASRTLKRNFPHMKVYNENANTLL 779
>gi|403417903|emb|CCM04603.1| predicted protein [Fibroporia radiculosa]
Length = 1212
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 89/181 (49%), Gaps = 21/181 (11%)
Query: 518 PLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVV 577
P PG +D I G PCQ S N F+ + D K+ ++ + +DFL+PK+ +ENV
Sbjct: 838 PKPGQIDCIVAGFPCQPHSRLNMFQRAN----DRKSHLILNLLSWIDFLRPKYCFLENVR 893
Query: 578 DIVKFAKGLL--GRY-------------ALARLIQMNYQVRMGMMAAGAYGLPQFRMRVF 622
+ ++ GRY + L+ MNYQVRMG++ A YG PQ R+R F
Sbjct: 894 GFLSYSLNATQAGRYRVEGGIAMGGLKFVIHALLAMNYQVRMGLLQAAHYGTPQTRVRFF 953
Query: 623 LWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELA--RKLLLQDAISDL 680
L A+ + LP PTH ++ + + +A + LA + + + DAISDL
Sbjct: 954 LIAARHSYLLPSMPQPTHSFPVKDALALKLTNGGMALPVLTGSGLAPFKYISIDDAISDL 1013
Query: 681 P 681
P
Sbjct: 1014 P 1014
>gi|443724442|gb|ELU12454.1| hypothetical protein CAPTEDRAFT_222429 [Capitella teleta]
Length = 1007
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 85/175 (48%), Gaps = 14/175 (8%)
Query: 515 KILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLME 574
++ PL G+VD+I GPPCQG S N+F + + KN ++ + D+ +PK+ +ME
Sbjct: 628 QVYPLKGEVDLISAGPPCQGYSLLNKFTSSEA--YQFKNSLVVTALSFCDYYQPKYFVME 685
Query: 575 NVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPP 634
NV G L + + L+++ YQ R G++ AG+YG+PQ R R L A LP
Sbjct: 686 NVSTFATHKGGNLLKLVIRCLLELGYQCRFGILQAGSYGVPQSRRRFILMAAAQGLLLPA 745
Query: 635 YALPTHDVVLRGVIPTEF------ERNTVAYDEGQQAELARKLLLQDAISDLPSV 683
+ P H P F +R E + R L ++DA DLP V
Sbjct: 746 FPEPIH------AFPVAFCDVYIDKRKFKPGLERIKIGHLRPLQIRDAFDDLPDV 794
>gi|2952279|gb|AAC05485.1| chromomethylase CMT1 [Brassica oleracea var. italica]
Length = 62
Score = 97.4 bits (241), Expect = 2e-17, Method: Composition-based stats.
Identities = 41/61 (67%), Positives = 53/61 (86%)
Query: 536 SGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARL 595
SGFNRFRN PL DEKN+QL+V+M+I+D+LKP +VLMENVVD++KF+KG RYA+ARL
Sbjct: 1 SGFNRFRNNKAPLEDEKNQQLLVYMNIIDYLKPNYVLMENVVDLLKFSKGFCARYAVARL 60
Query: 596 I 596
+
Sbjct: 61 V 61
>gi|409045793|gb|EKM55273.1| hypothetical protein PHACADRAFT_184086 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1237
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 94/194 (48%), Gaps = 31/194 (15%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
+P PG+VD ICGGPPCQ SG NR++ D D ++ + + VDF +PK+ L+ENV
Sbjct: 818 MPKPGEVDFICGGPPCQSFSGANRWKKAD----DIRSTLICNTISYVDFYRPKYFLLENV 873
Query: 577 VDIVKFAKGL-------------LGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFL 623
++ G + ++ L+ + YQV ++ A YG PQ R RV
Sbjct: 874 TGLLSVPLGTEKQDQMTDGVAMGVVKFIFRALVSLGYQVHCKVLQAAQYGTPQSRERVIF 933
Query: 624 WGAQPTEKLPPYALPTHDVVLRGV----IPTE--FER--NTVAYDEGQQAELAR-----K 670
W A+ LP + PTH +GV +PT R ++ +++E A+
Sbjct: 934 WAARRDVPLPDFPYPTHHFA-KGVRSFNLPTGEVLHRPVRVAPHESAKRSEYAQYAPLCA 992
Query: 671 LLLQDAISDLPSVD 684
+ ++DAI DL D
Sbjct: 993 ITVEDAIGDLQKFD 1006
>gi|402904162|ref|XP_003914916.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Papio anubis]
Length = 1706
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 103/239 (43%), Gaps = 46/239 (19%)
Query: 509 THGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKP 568
T + + LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P
Sbjct: 1259 TTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRP 1316
Query: 569 KFVLMENVVDIVK------------FAKGLLGRY---------ALARLIQMNYQ------ 601
+F L+ENV + V GR+ + L + Q
Sbjct: 1317 RFFLLENVRNFVSXXXXXXXXXXXXXXXXXAGRWMWPAHDPASSQPSLTESRVQWHRPAI 1376
Query: 602 -------VRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRG------VI 648
V AG YG+ Q R R + A P EKLP + P H R V
Sbjct: 1377 QAAEAGVVLCPTGGAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVD 1436
Query: 649 PTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQCFIR 707
+F N G R + ++D +SDLP V N S EI Y+ EP++ FQ +R
Sbjct: 1437 DKKFVSNITRLSSGP----FRTITVRDTMSDLPEVRNGASALEISYNGEPQSWFQRQLR 1491
Score = 47.0 bits (110), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 11/83 (13%)
Query: 326 ANECEVGEPQKMDVKL-----LDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQ 380
+ CE EP+K ++KL LD++SGCG +S G + AG++ T WA+++ + A Q
Sbjct: 1178 SQACEPSEPEK-EIKLPKLRTLDVFSGCGGLSEGF----HQAGIS-DTLWAIEMWDPAAQ 1231
Query: 381 SLKLNHPETEVRNESAEDFLTLL 403
+ +LN+P + V E L L+
Sbjct: 1232 AFRLNNPGSTVFTEDCNILLKLV 1254
>gi|2952283|gb|AAC05487.1| chromomethylase [Rhododendron macrophyllum]
Length = 62
Score = 97.1 bits (240), Expect = 3e-17, Method: Composition-based stats.
Identities = 45/61 (73%), Positives = 51/61 (83%)
Query: 536 SGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARL 595
SGFNRFRN PL+D KN QL VFMDIV+FLKP+FVLMENVVDI K A G+LG YA+ARL
Sbjct: 1 SGFNRFRNVTEPLSDPKNHQLEVFMDIVEFLKPRFVLMENVVDIFKLAGGVLGCYAVARL 60
Query: 596 I 596
+
Sbjct: 61 V 61
>gi|24416628|dbj|BAC22505.1| cytosine methyltransferase [Marchantia paleacea subsp. diptera]
Length = 284
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 81/158 (51%), Gaps = 3/158 (1%)
Query: 556 LIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLP 615
++ F+ D+ +P++ L+ENV + V F KG R +A L++M YQVR G++ AG +G+
Sbjct: 12 ILAFLSYADYFRPRYFLLENVRNFVSFNKGQTFRLTMASLLEMGYQVRFGVLQAGNFGVS 71
Query: 616 QFRMRVFLWGAQPTEKLP--PYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLL 673
Q R R F+W A P E LP P A GV + D G A R + +
Sbjct: 72 QSRKRAFIWAAAPDESLPDWPEARHVSASSQLGVTLPGGGQYAAVRDAGLGAPF-RAITV 130
Query: 674 QDAISDLPSVDNYESRDEIPYDREPETEFQCFIRLRKD 711
+D I+DLP V N + Y + E+ FQ IR + D
Sbjct: 131 RDTIADLPPVANGADTLKTVYTQPAESWFQMHIRGKTD 168
>gi|402224965|gb|EJU05027.1| S-adenosyl-L-methionine-dependent methyltransferase [Dacryopinax
sp. DJM-731 SS1]
Length = 470
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 75/144 (52%), Gaps = 21/144 (14%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP PG+VD+I GGPPCQG S N F + D +N + + VDFL P+FVL+ENV
Sbjct: 318 LPRPGEVDIIIGGPPCQGFSRLNPFASA----LDSRNSLIGNALSYVDFLHPRFVLLENV 373
Query: 577 VDIVKFAKGL-------------LGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFL 623
++K + + + ++ L+Q YQVR ++ AG +G PQ R R
Sbjct: 374 PPLLKMSSTVRDETGDEEHIENAFAKLIVSFLVQRGYQVRFKVLQAGQHGAPQGRSRAIF 433
Query: 624 WGAQPTEKLPPYALPTHDVVLRGV 647
W A E LP + P ++RG+
Sbjct: 434 WAAWHGEVLPDFPFP----LIRGI 453
>gi|393230538|gb|EJD38142.1| S-adenosyl-L-methionine-dependent methyltransferase [Auricularia
delicata TFB-10046 SS5]
Length = 710
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 79/135 (58%), Gaps = 19/135 (14%)
Query: 521 GDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIV 580
G +DVIC GPPCQG S N R D+P KN ++ + +V+ ++P+++++ENVV I+
Sbjct: 293 GHIDVICAGPPCQGHSTLNSHRTADDP----KNCLILTALSLVEHIRPRYLVIENVVMIM 348
Query: 581 KF-------AKGLL-------GRYALAR-LIQMNYQVRMGMMAAGAYGLPQFRMRVFLWG 625
+ +G++ G + + L+++ YQVR+G++ AG +G PQ R R FL
Sbjct: 349 GWRLMAEQRGQGIIRGGETHGGIFLITSILLRLGYQVRIGLLNAGMHGTPQNRRRFFLIA 408
Query: 626 AQPTEKLPPYALPTH 640
A+P LP + PTH
Sbjct: 409 AEPGSTLPDFPHPTH 423
Score = 42.7 bits (99), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Query: 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNES 395
K +++LD + G G ++ G+ G+ + T++AVD +E A ++ NHP V ++
Sbjct: 208 KQKMQMLDPFCGAGGLTAGIERGSRC----IQTKFAVDSDEEAAKAFAKNHPHATVFHDD 263
Query: 396 AEDFLTLL 403
A FLT L
Sbjct: 264 ANSFLTSL 271
>gi|159470409|ref|XP_001693352.1| predicted protein [Chlamydomonas reinhardtii]
gi|158277610|gb|EDP03378.1| predicted protein [Chlamydomonas reinhardtii]
Length = 2505
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 100/218 (45%), Gaps = 24/218 (11%)
Query: 512 FKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFV 571
+ ++LPL G V ++ G PPCQ V+G NR +N A +N+ + +++V FL+ +V
Sbjct: 1753 YTERLLPLRGTVTLLVGCPPCQDVTGHNRSQNGMPVWASPRNRVIGHILELVKFLEIPYV 1812
Query: 572 LMENVVDIVKFAKGLLGRYALARL-IQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTE 630
+E V D V+ G RY A+ M YQ+R ++ A G+PQ R R+ +W A P
Sbjct: 1813 FIEQVRDAVRKDDGYWRRYVRAKAQADMRYQIRDAILHAPLQGIPQIRARLIMWMAAPGY 1872
Query: 631 KLPPYALPTHDVVLRGVIPTEFERNTVAYDE---------------------GQQAELAR 669
+LPP+ P + V+P T E G+ L
Sbjct: 1873 QLPPFPRPDFSSIFT-VLPDPDTAGTSTVTELPKPYNLRRLCTVMRHSTPTAGEGTMLHP 1931
Query: 670 KLLLQDAISDLPSVDNYESRDEIPY-DREPETEFQCFI 706
+++DA++ LP+ NY+ + D P T + +
Sbjct: 1932 PQVIKDAVTSLPARSNYDLSPAVKLGDSAPATALEHVL 1969
>gi|47220040|emb|CAG12188.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1209
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 90/191 (47%), Gaps = 36/191 (18%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP GDV+++CGGPPCQG SG NRF ++ + KN ++ ++ D+ +PKF L+ENV
Sbjct: 855 LPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSAFKNSLVVSYLSYCDYYRPKFFLLENV 912
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F ++ + L L++M YQ G++ G P
Sbjct: 913 RNFVSFKSSMVLKLTLRCLVRMGYQCTFGVLQVS--GTP--------------------- 949
Query: 637 LPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDR 696
G + + + Y + R + ++D +SDLP + N S EI Y+
Sbjct: 950 ---------GCVGSGWAAG--VYLSRGNGGIYRTITVRDTMSDLPEIRNGASALEISYNG 998
Query: 697 EPETEFQCFIR 707
EP++ FQ IR
Sbjct: 999 EPQSWFQRQIR 1009
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 51/94 (54%), Gaps = 12/94 (12%)
Query: 333 EPQKMDV---KLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPET 389
EPQ + V + LD++SGCG +S G + AG++ T WA+++ E A Q+ +LN+P
Sbjct: 774 EPQTLKVPKYRTLDVFSGCGGLSEGF----HQAGIS-ETLWAIEMWEPAAQAFRLNNPGA 828
Query: 390 EVRNESAEDFLTLLREWEKLCISFSLIARKDPQQ 423
V E L L+ EK + + +K PQ+
Sbjct: 829 TVFTEDCNILLKLVMSGEKT----NSLGQKLPQK 858
>gi|302694677|ref|XP_003037017.1| hypothetical protein SCHCODRAFT_103476 [Schizophyllum commune H4-8]
gi|300110714|gb|EFJ02115.1| hypothetical protein SCHCODRAFT_103476, partial [Schizophyllum
commune H4-8]
Length = 1190
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 92/188 (48%), Gaps = 23/188 (12%)
Query: 520 PGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDI 579
PGD+DV+ G PCQ S NRFR + D+KN + + V FLKPKFV ENV
Sbjct: 791 PGDIDVVVAGFPCQSHSLLNRFRR----IGDKKNNLIWNALSWVGFLKPKFVFFENVPGF 846
Query: 580 VKF--------AKGLLG-------RYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLW 624
+++ A L G + + L +M YQ+R +M AG YG PQ R+R F+
Sbjct: 847 LQYNLLPRQVSANRLEGGIEKGGLKLCVRALAEMGYQLRFCLMQAGHYGAPQHRVRFFVV 906
Query: 625 GAQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVD 684
A+ LP PTHD I ++ER T+ + + R + Q+ ++ +V
Sbjct: 907 AAKQGVPLPDLPQPTHDFT---TIAKQYERLTLVLSKNTDTTI-RPINTQNGVAPFKAVT 962
Query: 685 NYESRDEI 692
++ D++
Sbjct: 963 VADAIDDL 970
>gi|426201069|gb|EKV50992.1| hypothetical protein AGABI2DRAFT_113733 [Agaricus bisporus var.
bisporus H97]
Length = 1362
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 73/140 (52%), Gaps = 19/140 (13%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
+P PG VD+I G PCQ SG N F+ ++P K+ ++ + VD+ +PK+V +ENV
Sbjct: 933 VPRPGSVDLITAGFPCQTHSGLNMFKTANDP----KSSLMLTALSWVDYYRPKYVYLENV 988
Query: 577 VDIVKF--------------AKGLLGRYALAR-LIQMNYQVRMGMMAAGAYGLPQFRMRV 621
++F + G L R L+ M YQVR ++ AG YG PQ R+R
Sbjct: 989 AGFLRFNLDTRQAGLHRVEGGVTMGGLKLLVRALLDMRYQVRYSLLQAGHYGTPQRRIRF 1048
Query: 622 FLWGAQPTEKLPPYALPTHD 641
FL +Q T LP PTHD
Sbjct: 1049 FLIASQSTLPLPNLPQPTHD 1068
>gi|395332104|gb|EJF64483.1| S-adenosyl-L-methionine-dependent methyltransferase [Dichomitus
squalens LYAD-421 SS1]
Length = 1249
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 89/186 (47%), Gaps = 25/186 (13%)
Query: 518 PLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVV 577
P PGD+D I G PCQ S N F+ + D K+ L+ + +D+L+PK+ + ENV
Sbjct: 860 PKPGDIDCIVAGFPCQPHSTLNMFQKAN----DRKSHLLLNLLSWIDYLQPKYCVFENVR 915
Query: 578 DIVKFA--KGLLGRYALA-------------RLIQMNYQVRMGMMAAGAYGLPQFRMRVF 622
+ + GR+ + L+ + YQV ++ AG YG PQ R+R F
Sbjct: 916 GFLNYNLNASQAGRFRMVGGIKMGGLKFFIHALLTLGYQVHFSLLQAGQYGTPQRRVRFF 975
Query: 623 LWGAQPTEKLPPYALPTHDVV----LRGVIPTEFERNTVAYDEGQQAELARKLLLQDAIS 678
L +Q + LP + LPTH V+ L P E N V +G R + ++DAI
Sbjct: 976 LLASQKSYPLPSFPLPTHAVLNPDALSIRFPNGVEINPVPTGDGTAP--FRAVCIRDAID 1033
Query: 679 DLPSVD 684
DL + D
Sbjct: 1034 DLVAFD 1039
>gi|393216765|gb|EJD02255.1| S-adenosyl-L-methionine-dependent methyltransferase [Fomitiporia
mediterranea MF3/22]
Length = 1109
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 82/157 (52%), Gaps = 21/157 (13%)
Query: 501 GEKIKEFVTHGFKSKILP---LPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLI 557
G+++ + ++ G + ++LP PG+VD+I GGPPCQ +G NRF+ D D + +
Sbjct: 673 GKRLPDLLSLGPEKEVLPSLPRPGEVDLIMGGPPCQPYTGLNRFKRID----DIRQTCIP 728
Query: 558 VFMDIVDFLKPKFVLMENVVDIVKF--------------AKGLLGRYALARLIQMNYQVR 603
+ V+F PK+VL+ENV I+ + +G + ++ + L + YQ
Sbjct: 729 TLLSYVEFYSPKYVLIENVTSILHYRLKGRQEGRKIVGGVEGGMVKFIVRTLTSLGYQCS 788
Query: 604 MGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTH 640
+ ++ + YG P R VF W A+ LP + +PTH
Sbjct: 789 LKVLNSVDYGSPHQRKCVFFWAARRDLLLPKWPIPTH 825
>gi|347839917|emb|CCD54489.1| hypothetical protein [Botryotinia fuckeliana]
Length = 983
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 71/143 (49%), Gaps = 19/143 (13%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADE---KNKQLIVFMDIVDFLKPKFVLM 573
+P GD+D+I GGPPCQG S NR N + L + + + F+ VDF +PK+ L+
Sbjct: 393 MPAKGDIDMIVGGPPCQGWSRANRKNNPNKILKEPICPMREAIATFLSYVDFYRPKYFLL 452
Query: 574 ENV----------VDIVKFA------KGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQF 617
ENV DI ++ K ++ L + YQ + + AGAYG+P
Sbjct: 453 ENVPGIKHHPLNGNDIPNYSPDGGPLKNGAMKFIFRFLTSLGYQCQHATLQAGAYGVPSS 512
Query: 618 RMRVFLWGAQPTEKLPPYALPTH 640
R RV +W P KLP Y PT+
Sbjct: 513 RKRVIIWACLPGHKLPKYPEPTN 535
>gi|443920769|gb|ELU40612.1| C5-DNA-methyltransferase [Rhizoctonia solani AG-1 IA]
Length = 1230
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 98/219 (44%), Gaps = 48/219 (21%)
Query: 519 LPG--DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LPG DVD IC GPPCQ SG NRFR +P + +I M VD +PK+ L+ENV
Sbjct: 812 LPGRYDVDFICAGPPCQSFSGANRFRKDTDP----RTTMIIAVMAAVDHYRPKYFLVENV 867
Query: 577 VDIVK-------------------------FAKGLLGRYALARLIQMNYQVRMGMMAAGA 611
+ + +G+L R+ + + Y +R+G++ A
Sbjct: 868 PNALTNRILGPSARGRSSDSAETDFHEDNYVEQGIL-RFITRAALDLGYAIRVGILQASE 926
Query: 612 YGLPQFRMRVFLWGAQ-----PTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQ--- 663
+G PQ R R F+ GA+ P LP Y +P + LR +P+ + +G
Sbjct: 927 HGAPQHRRRAFIMGARHGHTLPNFPLPSYCVPKPETGLR--LPSSRYGDPTHQKDGNVPI 984
Query: 664 -QAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETE 701
+ R++ + DAISDL + PY PETE
Sbjct: 985 VGNGIHRRVTMWDAISDLAPFEWVN-----PYFAIPETE 1018
>gi|403413292|emb|CCL99992.1| predicted protein [Fibroporia radiculosa]
Length = 671
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 96/213 (45%), Gaps = 50/213 (23%)
Query: 517 LPLPGDVDVICGG------------------PPCQGVSGFNRFRNKDNPLADEKNKQLIV 558
+P PG+VD I GG PPCQ SG N ++ D D +N +
Sbjct: 247 MPKPGEVDFIYGGNYCAFILIDAIVICSFTGPPCQSFSGMNHYKRAD----DIRNTLVCN 302
Query: 559 FMDIVDFLKPKFVLMENVVDIVKF-------AKGLLG-------RYALARLIQMNYQVRM 604
+ V+F +P + L+ENV ++ + + ++G ++ L L+ + YQVR
Sbjct: 303 MLSYVEFYQPLYFLLENVTGLLFYPLNGRQEGRAIVGGVKMGVVKFILRTLVSLGYQVRF 362
Query: 605 GMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGV----IPT-EFERNTVAY 659
++ AG YG PQ R RV WGA+ LP + LPTH RGV +PT + R
Sbjct: 363 KVLQAGQYGSPQDRKRVIFWGAKQGLPLPEFPLPTHSFP-RGVQAFKLPTGDILRPVTRS 421
Query: 660 DEGQQAELARKL--------LLQDAISDLPSVD 684
D + +L + +A+SDLP D
Sbjct: 422 DHSATTSKSMRLDFAPLLPVTVNEALSDLPPFD 454
>gi|392571000|gb|EIW64172.1| S-adenosyl-L-methionine-dependent methyltransferase [Trametes
versicolor FP-101664 SS1]
Length = 1239
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 72/150 (48%), Gaps = 19/150 (12%)
Query: 518 PLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVV 577
P PGD+D I G PCQ S N F+ + D K ++ + VDFL+PK+ ENV
Sbjct: 831 PCPGDIDCIVAGFPCQPHSQLNMFKKAN----DRKTNLILNLLSWVDFLRPKYCFFENVR 886
Query: 578 DI--------------VKFAKGLLGRYALAR-LIQMNYQVRMGMMAAGAYGLPQFRMRVF 622
V+ + G L R L+ M YQVR G++ AG YG PQ R+R F
Sbjct: 887 GFLSSTLHARQASKYRVEGGIKMGGLKFLTRSLLAMGYQVRFGLLQAGHYGTPQARVRFF 946
Query: 623 LWGAQPTEKLPPYALPTHDVVLRGVIPTEF 652
L AQ LP PTHD L+ + +F
Sbjct: 947 LVAAQIGYPLPKLPQPTHDFPLQDGLEIKF 976
>gi|422024086|ref|ZP_16370586.1| cytosine-specific methyltransferase [Providencia sneebia DSM 19967]
gi|414091279|gb|EKT52966.1| cytosine-specific methyltransferase [Providencia sneebia DSM 19967]
Length = 353
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 81/167 (48%), Gaps = 33/167 (19%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+DV+ GGPPCQG+S + L D +N+ + F+ IV L PK+VL+ENV I+
Sbjct: 70 IDVVIGGPPCQGLS-----LSGPRKLEDPRNQLYLSFIRIVSLLNPKYVLIENVPGIISL 124
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTH-- 640
KG + + L + Y V ++ A YG+PQ R RVF G + EK + LPTH
Sbjct: 125 FKGKIKDEIIKSLETLGYTVNFQVLKASEYGVPQHRRRVFFIGTKAMEKF-DFPLPTHKE 183
Query: 641 --DVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDN 685
D++ + +I T DA+ DLP ++N
Sbjct: 184 QEDLIFKKMIST-----------------------YDALHDLPVLEN 207
>gi|12229856|sp|P94147.1|MTA1_RUEGE RecName: Full=Modification methylase AgeI; Short=M.AgeI; AltName:
Full=Cytosine-specific methyltransferase AgeI
gi|8037880|gb|AAF71525.1|AF247972_2 AgeI methylase [Thalassobius gelatinovorus]
gi|1695647|dbj|BAA11333.1| ageI metylase [Thalassobius gelatinovorus]
gi|1588637|prf||2209243A AgeI methylase
Length = 429
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 103/191 (53%), Gaps = 14/191 (7%)
Query: 520 PGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDI 579
PG VDV+ GGPPCQG S + + R+ D +N+ + + V+ +PK L+ENVV +
Sbjct: 68 PGQVDVVMGGPPCQGFSTYGQRRDDD-----ARNQLYVPYFGFVEEFRPKAFLIENVVGL 122
Query: 580 VKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPT 639
+ + G + +AR + Y + + A YG+PQ R RVF++GA +++ P P+
Sbjct: 123 LSMSGGAVLADMVARAEALGYAADVVTLDACEYGVPQHRRRVFIFGAADGQRIDP-PQPS 181
Query: 640 HDVVLR-GVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPS--VDNYESRDEIPYDR 696
H R GV+ ++ ++ +D + L ++DAISDLP + +++ + Y
Sbjct: 182 HVNGKRSGVVLN--DQPSLFFD---GPSIQPALTVRDAISDLPDEVLVPRDTQKPMEYPE 236
Query: 697 EPETEFQCFIR 707
P+TE+Q +R
Sbjct: 237 PPKTEYQRLMR 247
>gi|159477138|ref|XP_001696668.1| cytosine-C5 specific DNA methyltransferase [Chlamydomonas
reinhardtii]
gi|158282893|gb|EDP08645.1| cytosine-C5 specific DNA methyltransferase [Chlamydomonas
reinhardtii]
Length = 1263
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 98/220 (44%), Gaps = 40/220 (18%)
Query: 521 GDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDI- 579
G+V+++ GGPPCQG SG NR + A N + ++ DF +P++ ++ENV+
Sbjct: 810 GEVELLVGGPPCQGFSGLNRHAGSEK--AVRNNSLVGSYLSYCDFYRPRYFILENVMGFT 867
Query: 580 ----VKFAKGLLG-----------------RYALARLIQMNYQVRMGMMAAGAYGLPQFR 618
V+ +G + AL L+ M YQVR G + AG YG+PQ R
Sbjct: 868 FYKPVQPTEGSHKSRQRRRRSKSSPSVSYFKLALRTLLDMGYQVRFGALNAGNYGVPQSR 927
Query: 619 MRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFER----------NTVAYDEGQQAELA 668
R+F+ A P E LP + P H + + E + Y G LA
Sbjct: 928 KRMFIIAALPEEVLPNWPRPMHSFRVAAEAGSNREGQQDQPPIPVPGGMYYANGAGKCLA 987
Query: 669 ----RKLLLQDAISDLPSVDNYESRD-EIPYDREPETEFQ 703
R + ++DAI +LP + D +P R P + FQ
Sbjct: 988 GTPLRAVTVRDAIGNLPPITPGTKGDPAVPLPR-PMSAFQ 1026
>gi|388857258|emb|CCF49100.1| related to Cytosine-specific methyltransferase [Ustilago hordei]
Length = 767
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 85/178 (47%), Gaps = 13/178 (7%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
P PG++D+I GPPCQG S NR +++ D +N + + VD+L+PK+ +MENV
Sbjct: 390 FPCPGEIDMISAGPPCQGFSRKNRHAHREAAEKDSRNLLVCSVLGWVDYLRPKYFVMENV 449
Query: 577 VDIVKFAKGLLG-------RYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPT 629
F LG + + L++M Y V G +GA+G PQ R R L ++
Sbjct: 450 EG---FTMSRLGGREQGMVKLVMRCLMKMGYAVTCGYAQSGAFGCPQSRKRFLLLASKDE 506
Query: 630 EKLPPYALPTHDVVLRGVIPTEFERNT-VAYDEGQQAELAR--KLLLQDAISDLPSVD 684
LP PTH+ + R +E + Y+ A + DAISDLP D
Sbjct: 507 VTLPNLPQPTHEFLGRPAHTFLWEDGSETTYNSASTLVGATLPAVTASDAISDLPVFD 564
>gi|389748984|gb|EIM90161.1| S-adenosyl-L-methionine-dependent methyltransferase [Stereum
hirsutum FP-91666 SS1]
Length = 1151
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 85/181 (46%), Gaps = 23/181 (12%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
D+DVI G PCQ S N F+ + D K+ ++V + VD KPK+ L ENV ++
Sbjct: 758 DIDVILAGFPCQPHSRLNMFQKAN----DSKSNLILVLLSYVDLFKPKYCLFENVRGFLQ 813
Query: 582 F-----------AKGLLG----RYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGA 626
F +G + ++ ++ M+YQVR+ ++ G YGLPQ R+R F+ A
Sbjct: 814 FNLNATQKDQYSVEGGIDMGGIKFLQYAMLTMDYQVRIMLLQGGHYGLPQTRIRFFMVAA 873
Query: 627 QPTEKLPPYALPTHDVVLRGVIPTEFERNTV---AYDEGQQAELARKLLLQDAISDLPSV 683
+ LP PTH + +F V G+ A R ++DAI DLP
Sbjct: 874 KRGYHLPEVPQPTHQFPANDGLEIKFTNGMVIRPVQTNGRSAPF-RSTTIEDAIGDLPRF 932
Query: 684 D 684
D
Sbjct: 933 D 933
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 94/226 (41%), Gaps = 27/226 (11%)
Query: 189 YDLFDDAHVKAESGEEDYI------------CK---IVEMFEAVDGTPYFTAQWYYRARD 233
Y++ D+ VK + G E +I C+ I++ G P T Q D
Sbjct: 501 YEMLDNG-VKFDDGREFHIYDCAFFSLREKHCQAGMIIDFRVPARGEPTVTLQLIGFVND 559
Query: 234 TVIESNAHLIDQRRVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLAIPHCDYYCDM 293
+ + D+R VF S+ + L L +L+IA + DL P ++ +
Sbjct: 560 IPSLPDDVMKDERHVFLSDERVSVALRYLGDQLHIAHLRAIPDLSTWHSLSP---FHFHL 616
Query: 294 MYLLPYSTFFSLPPE--NKRVSSETSSTISSDVDA-NECEVGEPQKMDVKLLDLYSGCGA 350
Y LP + PE + R + S + + + G + ++ LD+++G GA
Sbjct: 617 TYQLPNAKPSRWTPEPLDYRKARICVSCMKVQIKKFQRKKEGRGEGPTLRALDVFAGVGA 676
Query: 351 MSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESA 396
LG AG VT A++I+ A ++LKLN P V N+ A
Sbjct: 677 FG----LGMEEAGGIKVTH-AIEISPSAAKTLKLNAPNVTVYNQDA 717
>gi|147790936|emb|CAN77234.1| hypothetical protein VITISV_010061 [Vitis vinifera]
Length = 3216
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 136/337 (40%), Gaps = 90/337 (26%)
Query: 47 TKRKTRSSVNDNTSLSSKKSKVEPEPEACVEKEGEVAEVICENSVAGSGSSSGVKVNKNR 106
T ++ S ND +S + S V E C+ + ++ +S+ G GSS V
Sbjct: 2865 TSSQSSESGNDAKIVSFRTSDVTVMDEKCLRRSPRLS-----SSLVGPGSSKPVFSCSES 2919
Query: 107 SSS--KKPIDSVKKLPVRGEHDDDDEPEARFLGDPVPDGEARQRWPKRYEVKKQKR---- 160
S S K+P + LP + + F+GDPVPD EA++RW RY++K R
Sbjct: 2920 SDSFEKRPCKKIV-LPTSENRHGQYKRTSFFIGDPVPDKEAQERWHWRYDLKAPPRVMVE 2978
Query: 161 -----------RNQKDDDEEEII-QAKCHYMWAEVDG---------HITYDLFDDAHV-- 197
DD+EEEI+ +CHY A++DG HI + + ++
Sbjct: 2979 MLAISFETFVVSQSADDNEEEIVTNVECHYTQAKLDGTIFNLGDCAHIKFMELHEMNLYL 3038
Query: 198 ----------------------------------KAESGEEDYI-----------CKIVE 212
K SG ++I C +
Sbjct: 3039 VIVRFLTRRLGSVPHDMIAKSQGVFVREILKIERKIGSGWRNWIVLSSIAVVGKGCSLPF 3098
Query: 213 MFEAVDGTPYFTAQWYYRARDTVIESNAHLIDQRRVFFSEIQNDNPLECLVKKLNIA--- 269
++E + + V++ A D++R+F S I NDN L+C++ K+N+
Sbjct: 3099 IYEIIIFVLAISLVHVNHIDHLVMKEEAASHDKKRIFCSTIMNDNSLDCIISKVNVLELT 3158
Query: 270 -RVPLNIDLEAKKLAIPHCDYYCDMMYLLPYSTFFSL 305
RV L +D +IP DYY DM Y + YSTF +L
Sbjct: 3159 PRVSLKLD------SIPPFDYYYDMKYNVEYSTFHTL 3189
>gi|338999490|ref|ZP_08638133.1| hypothetical protein GME_15605 [Halomonas sp. TD01]
gi|338763639|gb|EGP18628.1| hypothetical protein GME_15605 [Halomonas sp. TD01]
Length = 394
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 98/208 (47%), Gaps = 5/208 (2%)
Query: 504 IKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIV 563
I++ K K+ ++D++ GGPPCQG S R+ D DE+N F+ I
Sbjct: 57 IRQLCAVDLKGKLNLEENELDLVAGGPPCQGFSVNAPIRDLD----DERNHLFKDFLRIA 112
Query: 564 DFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFL 623
L PK +L+ENV IV KG + + L Y+V ++ AG YG+PQ R R +
Sbjct: 113 FELMPKAILIENVPGIVSLGKGTVVKQIYKELESRGYRVEHRILYAGHYGVPQLRFRTII 172
Query: 624 WGAQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSV 683
+ EK + P ++ R E + +EL ++ + DA+SDLP +
Sbjct: 173 IAVKGREKEIYFPQPQYNSTARANFAGAKEL-CLKLLPLFASELKKQTTVWDALSDLPPI 231
Query: 684 DNYESRDEIPYDREPETEFQCFIRLRKD 711
++ + Y+ P+ E+Q ++R D
Sbjct: 232 ESGSVNTLMNYEAPPQGEYQKYLRKNSD 259
>gi|426281416|gb|AFY23862.1| DNA methyltransferase 1, partial [Schistocerca gregaria]
Length = 337
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 89/174 (51%), Gaps = 12/174 (6%)
Query: 540 RFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMN 599
RF ++ L KN ++ ++ D+ +P++ ++ENV + V F + ++ + L L +M
Sbjct: 1 RFNSRQYSLF--KNSLIVSYLSYCDYYRPRYFILENVRNFVSFKRSMVLKLTLRCLQKMG 58
Query: 600 YQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRG------VIPTEFE 653
YQ G++ AG YG+PQ R R + A P E LP + PTH R V +F
Sbjct: 59 YQCTFGILQAGNYGVPQTRRRAXILAAAPGEVLPNFPEPTHXFSPRACQLSVVVDENKFT 118
Query: 654 RNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQCFIR 707
N D + R + ++D++SDLP + N ++E+ Y EP T FQ +R
Sbjct: 119 SNCKWVDSAPR----RTITVRDSMSDLPEIRNGHKKEEMSYGGEPLTHFQRLVR 168
>gi|392567063|gb|EIW60238.1| S-adenosyl-L-methionine-dependent methyltransferase [Trametes
versicolor FP-101664 SS1]
Length = 1101
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 91/187 (48%), Gaps = 25/187 (13%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP PG+VD I GGPPCQ S N + + D ++ + + V++ +P F L+ENV
Sbjct: 678 LPQPGEVDFIYGGPPCQSFSNMNHHKKAN----DIRSTLVCNMISYVEYYRPMFFLLENV 733
Query: 577 VDIVKFAKG-------LLG-------RYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVF 622
V ++ + G ++G ++ L L + YQV ++ AG +G PQ R RV
Sbjct: 734 VGMLSYRLGGEQDHNRVVGGIEMGVVKFILGSLTILGYQVHFKVLQAGQHGAPQGRRRVI 793
Query: 623 LWGAQPTEKLPPYALPTHDV---VLRGVIPTEFERNTV----AYDEGQQAELARKLLLQD 675
GAQ LP + LP H V +PT + V A ++G Q + +++
Sbjct: 794 FLGAQRDVPLPAFPLPQHAFPTPVHNVNLPTGEVLHPVIRVGADEDGHQCAPLPPVTVRE 853
Query: 676 AISDLPS 682
AISDL S
Sbjct: 854 AISDLVS 860
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 41/62 (66%), Gaps = 5/62 (8%)
Query: 339 VKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAED 398
++ L+L++G G +STGL +++G+ + TRWAV+ + A ++ K NHP+T V ++ +
Sbjct: 593 LRGLELFAGAGGLSTGL----DMSGM-VQTRWAVEFSPSAARTYKANHPDTIVYSQCSNK 647
Query: 399 FL 400
L
Sbjct: 648 LL 649
>gi|84686808|ref|ZP_01014695.1| DNA methylase, C-5 cytosine-specific family protein [Maritimibacter
alkaliphilus HTCC2654]
gi|84665239|gb|EAQ11718.1| DNA methylase, C-5 cytosine-specific family protein
[Rhodobacterales bacterium HTCC2654]
Length = 336
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 98/196 (50%), Gaps = 10/196 (5%)
Query: 521 GDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIV 580
G++D++ GGPPCQG S R+ D D++N + F+ VD +PK VL+ENV +V
Sbjct: 6 GELDLVAGGPPCQGFSINAPKRSAD----DDRNSLFLEFLRFVDEFEPKAVLIENVPGLV 61
Query: 581 KFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYAL--P 638
F G + L L Y + ++ A +G+PQ R R + G + + P A P
Sbjct: 62 SFEGGGTLQAILLALGHHGYSADVKILYAPHFGVPQTRWRTVIIGIRGDQADPLRAFPEP 121
Query: 639 THDVVLRGVIPTEFE-RNTVAYDEGQQAELARKLLLQDAISDLPSVDNYE-SRDEIPYDR 696
+ LR + FE +N VA EL + ++DAI DLP++ N E ++ Y
Sbjct: 122 VRNAPLRVNFTSNFEGKNIVALP--TNLELPSFVSVRDAIDDLPALANGEIGKERKNYRS 179
Query: 697 EPETEFQCFIRLRKDG 712
P+ +FQ +R DG
Sbjct: 180 GPQNDFQVAMRNGSDG 195
>gi|392595567|gb|EIW84890.1| S-adenosyl-L-methionine-dependent methyltransferase [Coniophora
puteana RWD-64-598 SS2]
Length = 1176
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 92/218 (42%), Gaps = 54/218 (24%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
+P PGDV+ I GGPPCQ S N + D D + + + V+F +P+F L+ENV
Sbjct: 756 MPQPGDVNFIYGGPPCQPFSRMNSHKKSD----DIRATLVANMLSYVEFYRPRFFLLENV 811
Query: 577 VDIVKFA----------KGLLGRYALAR---------------------LIQMNYQVRMG 605
+ ++ L GR R L+ + YQ++
Sbjct: 812 LGMLGHKLEDQIGREQDNQLKGRLPKERSSDEQEDQSIKFGVVKFITRCLLALGYQIQFK 871
Query: 606 MMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV---VLRGVIPTEFERNTVAYDEG 662
++ AG YG PQ R R+ WGA+ E +P + LPTH + + + ++PT V +D
Sbjct: 872 ILNAGQYGAPQSRRRIIFWGAKNGELMPAFPLPTHSLQNPLQKSLLPTGSWSLPVTWDHQ 931
Query: 663 QQAELARKLL----------------LQDAISDLPSVD 684
L + ++DAI DLP D
Sbjct: 932 GLWLLQDSVYEEVTGLHSCAPLDMVTIEDAIGDLPPFD 969
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 16/89 (17%)
Query: 317 SSTISSDVDANECEVGEPQKMDVKL-----------LDLYSGCGAMSTGLCLGANLAGLN 365
S +I + +EC G +++ K L+L+ G G + TGL ++G
Sbjct: 640 SKSIFTTTVCSECHDGHLEELRCKADCLKQSGCLQGLELFCGAGGLGTGL----EMSGF- 694
Query: 366 LVTRWAVDINEYACQSLKLNHPETEVRNE 394
+ T+WA DI+ + ++ K NHP+ V N+
Sbjct: 695 VETKWAADISPSSAKTFKSNHPDATVYNQ 723
>gi|389749172|gb|EIM90349.1| S-adenosyl-L-methionine-dependent methyltransferase [Stereum hirsutum
FP-91666 SS1]
Length = 1217
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 90/190 (47%), Gaps = 33/190 (17%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
+P PGD+D+I G PCQ SG N ++ D+P +N+ + + VD+ +P +MENV
Sbjct: 823 MPQPGDIDIIVAGLPCQSYSGMNHNKDPDDP----RNELVANMLSYVDWYRPPIFVMENV 878
Query: 577 VDIVKFAKGLLGRYALARLI----------------QMNYQVRMGMMAAGAYGLPQFRMR 620
I+ F G G+ R++ + YQV + ++ A YG PQ R R
Sbjct: 879 FGILHFPLG--GKKKGYRIVDGKPQGVIMLIFRVLTALGYQVHIALLHAPHYGSPQDRRR 936
Query: 621 VFLWGAQPTEKLPPYALPTHDVVLRG---------VIPTEFERNTVAYDEGQQAELARKL 671
V + + P LP + +PTH V R V+ T R + D A L R +
Sbjct: 937 VIIMASLPGVPLPKFPVPTHVFVPRAHKFSLCYNQVLHT-VTRAHESQDHYYGAPL-RSV 994
Query: 672 LLQDAISDLP 681
L +AISDLP
Sbjct: 995 RLGEAISDLP 1004
>gi|431758608|ref|ZP_19547233.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecium E3083]
gi|430616976|gb|ELB53862.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecium E3083]
Length = 352
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 98/209 (46%), Gaps = 42/209 (20%)
Query: 512 FKSKILPLPGD--VDVICGGPPCQG--VSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLK 567
+ I P+ GD +DVI GGPPCQG +SG +F D +NK + ++ +V +K
Sbjct: 61 YTKDIKPIIGDKRIDVIVGGPPCQGMSLSGPRKFE-------DPRNKLYLSYIRLVKEIK 113
Query: 568 PKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQ 627
PK ++ENV+ IV KG + + L +M Y V+ ++ A YG+PQ R RV G
Sbjct: 114 PKAFVIENVIGIVSLFKGQIKNHILKEFSEMGYNVQFKILLASDYGVPQKRKRVIFVGTL 173
Query: 628 PTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYE 687
++ + P P ++ T + AISDLPS++N
Sbjct: 174 AEKE---FTYPN---------PVDYTITT-----------------EMAISDLPSLENEL 204
Query: 688 SRDEIPYDREPETEFQCFIRLRKDGKKLW 716
E+ Y P+ +Q +RK +K++
Sbjct: 205 GDTEMDYLTAPQNSYQSL--MRKSSRKVY 231
>gi|443899025|dbj|GAC76358.1| hypothetical protein PANT_20d00075 [Pseudozyma antarctica T-34]
Length = 758
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 90/200 (45%), Gaps = 27/200 (13%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP PGDVDVI GPPCQG S N+ +D D +N + + V+ L+PK+ ++ENV
Sbjct: 378 LPRPGDVDVIAAGPPCQGFSRKNQTAARDAAEKDPRNLLVCTVLGWVEHLQPKYFILENV 437
Query: 577 VDIVKFAKGLLG-------RYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPT 629
F LG + LA L+++ Y G + +GAYG Q R R L A+
Sbjct: 438 EG---FTASKLGGHDQGMVKLVLAVLLKIGYAATWGFVQSGAYGCAQSRGRFILLAAKQE 494
Query: 630 EKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAE------LARKLLLQDAISDLPSV 683
LP PTHD +G + F + + GQ + L + D I DL
Sbjct: 495 LTLPKLPQPTHD--FQGRSSSGFWWSDAS---GQHTSRVPSMPILPALSVADTIDDLAVF 549
Query: 684 D------NYESRDEIPYDRE 697
D YE D I +RE
Sbjct: 550 DWRDPHQTYEGPDAIELERE 569
>gi|289167785|ref|YP_003446054.1| site-specific DNA methylase [Streptococcus mitis B6]
gi|288907352|emb|CBJ22189.1| site-specific DNA methylase [Streptococcus mitis B6]
Length = 351
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 99/202 (49%), Gaps = 37/202 (18%)
Query: 512 FKSKILPLPGD--VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPK 569
++ I P+ G+ +D+I GGPPCQG+S + R D+P +NK + ++ +V ++P
Sbjct: 60 YEEDIKPIIGEQKIDIIVGGPPCQGMS-LSGPRKFDDP----RNKLYLSYIRLVREIQPT 114
Query: 570 FVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPT 629
++ENV+ IV KG + + +M Y+V+ ++ A YG+PQ R RV G +
Sbjct: 115 AFVIENVIGIVSLFKGQIKDTIIEEFSKMGYKVQFKVLLASDYGVPQNRKRVIFVGTRND 174
Query: 630 EKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESR 689
E P AL T +I TE AISDLP+++N
Sbjct: 175 EFEYPEALGT-------IITTEM-----------------------AISDLPTLENELGE 204
Query: 690 DEIPYDREPETEFQCFIRLRKD 711
E+ Y EP+ ++Q +R R +
Sbjct: 205 IEMSYVSEPQNDYQKLMRKRSN 226
>gi|449541865|gb|EMD32847.1| hypothetical protein CERSUDRAFT_99217 [Ceriporiopsis subvermispora B]
Length = 1248
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 88/185 (47%), Gaps = 23/185 (12%)
Query: 518 PLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVV 577
P PG++DV+ G PCQ S N F+ + D K + M +D KPK+V +ENV
Sbjct: 841 PKPGEIDVLIAGFPCQPHSTLNMFQKAN----DRKTHLIATLMAYIDHYKPKYVFLENVR 896
Query: 578 DIVKFA----------------KGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRV 621
+ A KG L ++ +A +++ +QVR G++ A YG PQ R+R
Sbjct: 897 GFLSHALQAVQANRHKVVGGVEKGGL-KWLVATFLELGFQVRFGLLQAAHYGTPQSRVRF 955
Query: 622 FLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELA--RKLLLQDAISD 679
FL ++ LP + PTH ++ + + + A A +A + ++DAI D
Sbjct: 956 FLIASRRGLPLPQFPTPTHFFHVKDNLEIKLTDDEPAAAVRTAAGVAPFSFVSIEDAIGD 1015
Query: 680 LPSVD 684
LP D
Sbjct: 1016 LPRFD 1020
>gi|336377037|gb|EGO05372.1| hypothetical protein SERLA73DRAFT_68986 [Serpula lacrymans var.
lacrymans S7.3]
gi|336390079|gb|EGO31222.1| hypothetical protein SERLADRAFT_432870 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1211
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 104/237 (43%), Gaps = 55/237 (23%)
Query: 520 PGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV--- 576
PGD+D I G PCQ S N ++ + D K+ ++ + +DFL+P++ + ENV
Sbjct: 819 PGDIDCIVAGFPCQPHSRLNMYQKAN----DLKSNLILNVLSWIDFLQPRYCIFENVRGF 874
Query: 577 ---------VDIVKFAKGL-LG--RYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLW 624
VD K A G+ +G ++ + +I M YQVR+G++ A YG PQ R+R FL
Sbjct: 875 LQYNLKAHQVDEHKVAGGIEMGGLKFVMRVMIAMGYQVRVGLLQAAHYGTPQTRVRFFLV 934
Query: 625 GAQPTEKLPPYALPTHDVVLRGVIPTEFERN----TVAYDEGQQAELARKLLLQDAISDL 680
++ LP P+HD L + +F + + G + + DAI DL
Sbjct: 935 ASKHGYPLPELPQPSHDFPLVDSLEIKFPNGHYVRPIKFMNGTAPH--SYVSIDDAIHDL 992
Query: 681 PSVD------------NYESRDEIP------------------YDREPETEFQCFIR 707
P D + E+RD+I Y EP T FQ + R
Sbjct: 993 PLFDWSNPDRAGRSRQDPETRDDIKQVKCDKQKAWCGLRGQAVYRHEPRTAFQLWCR 1049
>gi|79835456|gb|ABB52087.1| Mod [Arthrospira platensis]
Length = 443
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 90/177 (50%), Gaps = 10/177 (5%)
Query: 521 GDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIV 580
GD+D++ GGPPCQG S + K +PL D++N+ F+ ++ +PK +MENVV I+
Sbjct: 74 GDLDILLGGPPCQGFSTYG----KRDPL-DQRNRLYRYFLKFLEEFRPKAFVMENVVGIL 128
Query: 581 KFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKL-PPYALPT 639
G + + + ++NY V + + A +G+PQFR RVF+ G +K+ PP A T
Sbjct: 129 SLEGGYVVEDIVNKAEKLNYGVSVITLDAVDFGVPQFRKRVFILGGSNHQKIQPPSA--T 186
Query: 640 HDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPS--VDNYESRDEIPY 694
H++ P + E + + +AI DLP + + + IPY
Sbjct: 187 HEISKNTSKPDSSSYQLCLFPESLDPPYQPAIKVSEAIGDLPEEVLPPRLTHESIPY 243
>gi|417847800|ref|ZP_12493761.1| putative modification methylase HaeIII [Streptococcus mitis SK1073]
gi|339456198|gb|EGP68791.1| putative modification methylase HaeIII [Streptococcus mitis SK1073]
Length = 351
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 98/202 (48%), Gaps = 37/202 (18%)
Query: 512 FKSKILPLPGD--VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPK 569
++ I P+ G+ +D+I GGPPCQG+S + R D+P +NK + ++ +V +KP
Sbjct: 60 YEEDIKPIIGEQKIDIIVGGPPCQGMS-LSGPRKFDDP----RNKLYLSYIRLVREIKPT 114
Query: 570 FVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPT 629
++ENV+ IV KG + + +M Y+V+ ++ A YG+PQ R RV G +
Sbjct: 115 AFVIENVIGIVSLFKGQIKDTIIEEFSKMGYKVQFKVLLASDYGVPQNRKRVIFVGTRND 174
Query: 630 EKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESR 689
P AL T +I TE AISDLP+++N
Sbjct: 175 GFEYPEALGT-------IITTEM-----------------------AISDLPTLENELGE 204
Query: 690 DEIPYDREPETEFQCFIRLRKD 711
E+ Y EP+ ++Q +R R +
Sbjct: 205 IEMSYVSEPQNDYQKLMRKRSN 226
>gi|409990103|ref|ZP_11273531.1| hypothetical protein APPUASWS_04335 [Arthrospira platensis str.
Paraca]
gi|291571237|dbj|BAI93509.1| type II DNA modification methyltransferase [Arthrospira platensis
NIES-39]
gi|409939035|gb|EKN80271.1| hypothetical protein APPUASWS_04335 [Arthrospira platensis str.
Paraca]
Length = 451
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 90/177 (50%), Gaps = 10/177 (5%)
Query: 521 GDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIV 580
GD+D++ GGPPCQG S + K +PL D++N+ F+ ++ +PK +MENVV I+
Sbjct: 74 GDLDILLGGPPCQGFSTYG----KRDPL-DQRNRLYRYFLKFLEEFRPKAFVMENVVGIL 128
Query: 581 KFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKL-PPYALPT 639
G + + + ++NY V + + A +G+PQFR RVF+ G +K+ PP A T
Sbjct: 129 SLEGGYVVEDIVNKAEKLNYGVSVITLDAVDFGVPQFRKRVFILGGSNHQKIQPPSA--T 186
Query: 640 HDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPS--VDNYESRDEIPY 694
H++ P + E + + +AI DLP + + + IPY
Sbjct: 187 HEISKNTSKPDSSSYQLCLFPESLDPPYQPAIKVSEAIGDLPEEVLPPRLTHESIPY 243
>gi|148988375|ref|ZP_01819822.1| cytosine specific DNA methyltransferase [Streptococcus pneumoniae
SP6-BS73]
gi|418166559|ref|ZP_12803215.1| DNA-cytosine methyltransferase family protein [Streptococcus
pneumoniae GA17971]
gi|421211039|ref|ZP_15668023.1| modification methylase DdeI [Streptococcus pneumoniae 2070035]
gi|421231707|ref|ZP_15688352.1| modification methylase DdeI [Streptococcus pneumoniae 2080076]
gi|147926056|gb|EDK77130.1| cytosine specific DNA methyltransferase [Streptococcus pneumoniae
SP6-BS73]
gi|353830155|gb|EHE10285.1| DNA-cytosine methyltransferase family protein [Streptococcus
pneumoniae GA17971]
gi|395573762|gb|EJG34349.1| modification methylase DdeI [Streptococcus pneumoniae 2070035]
gi|395596197|gb|EJG56419.1| modification methylase DdeI [Streptococcus pneumoniae 2080076]
Length = 351
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 99/204 (48%), Gaps = 41/204 (20%)
Query: 512 FKSKILPLPGD--VDVICGGPPCQG--VSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLK 567
++ I P+ G+ +D+I GGPPCQG +SG RF D+P +NK + ++ +V ++
Sbjct: 60 YEEDIKPIIGEQKIDIIVGGPPCQGMSLSGPRRF---DDP----RNKLYLSYIRLVREIQ 112
Query: 568 PKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQ 627
P ++ENV+ IV KG + + +M Y+V+ ++ A YG+PQ R RV G +
Sbjct: 113 PTAFVIENVIGIVSLFKGQIKDTIIEEFSKMGYKVQFKVLLASDYGVPQNRKRVIFVGTR 172
Query: 628 PTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYE 687
P AL T +I TE AISDLP+++N
Sbjct: 173 NDGFEYPEALGT-------IITTEM-----------------------AISDLPTLENEL 202
Query: 688 SRDEIPYDREPETEFQCFIRLRKD 711
E+ Y EP+ ++Q +R R +
Sbjct: 203 GEIEMSYVSEPQNDYQKLMRKRSN 226
>gi|393216766|gb|EJD02256.1| S-adenosyl-L-methionine-dependent methyltransferase, partial
[Fomitiporia mediterranea MF3/22]
Length = 1118
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 91/194 (46%), Gaps = 34/194 (17%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP PG+VD+I GGPPCQ SG N ++ D D + + + V+F PK+V +ENV
Sbjct: 694 LPSPGEVDLIMGGPPCQPFSGMNSWKRVD----DIRQTCIPTVLSYVEFYSPKYVCIENV 749
Query: 577 VDIVKF-------AKGLLG-------RYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVF 622
++ + + ++G ++ + + YQ +M ++ A YG PQ R RV
Sbjct: 750 TGLLYYRLKGRQEGRRIVGGIESGMVKFVMRAFTSLGYQCQMKVLNAADYGSPQQRNRVI 809
Query: 623 LWGAQPTEKLPPYALPTH----------DVVLRGVIPTEFERNTVAYDEGQQAELA--RK 670
W A+ LP + TH + G + RN + G++ E A
Sbjct: 810 FWAARLDLALPKWPTQTHIPRQGHKAVQRRITNGFLAPLASRN----ESGEKHEQAPFYA 865
Query: 671 LLLQDAISDLPSVD 684
+ +++AI DLP+ D
Sbjct: 866 VTIKEAIDDLPAWD 879
Score = 43.9 bits (102), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 5/71 (7%)
Query: 335 QKMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNE 394
+++ ++ +DL+SG G ++TG+ + +G + T WAV+ A QSLK NH +T V N+
Sbjct: 606 KELPLRAMDLFSGAGGLTTGM----DQSGF-IKTCWAVERCPAAAQSLKANHADTVVYNQ 660
Query: 395 SAEDFLTLLRE 405
+ L + E
Sbjct: 661 DCSELLKHVAE 671
>gi|320588321|gb|EFX00790.1| DNA methyltransferase dim-2 [Grosmannia clavigera kw1407]
Length = 1168
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 83/176 (47%), Gaps = 18/176 (10%)
Query: 490 TWEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLA 549
T + +E +++ G S+ +P PG+VD+I GG PCQG S +K P
Sbjct: 697 TADAVEPFLGSADELLARALQGRYSRAVPAPGEVDLISGGSPCQGFSVLTS--DKAAPKQ 754
Query: 550 DEKNKQLIVFMDIVDFLKPKFVLMENVVDIV---------KFAKGLLGRYALARLIQMNY 600
+ + F +VD +P + ++ENV V + + G+ L L+ + Y
Sbjct: 755 YKNRSMVASFASMVDLYRPLYGVLENVPAFVARQPRQQDKNHREDIFGQL-LCALVGLGY 813
Query: 601 QVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNT 656
QV + + A AYG PQ R RVFL A P +LP + LP+H P++F T
Sbjct: 814 QVAVHLGNAWAYGAPQSRQRVFLLFAAPAVRLPVFPLPSHGS------PSDFHATT 863
>gi|205360554|ref|ZP_02684441.2| modification methylase DdeI [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|417370248|ref|ZP_12141176.1| DNA-cytosine methyltransferase [Salmonella enterica subsp. enterica
serovar Hvittingfoss str. A4-620]
gi|205348823|gb|EDZ35454.1| modification methylase DdeI [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|353582256|gb|EHC42962.1| DNA-cytosine methyltransferase [Salmonella enterica subsp. enterica
serovar Hvittingfoss str. A4-620]
Length = 394
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 99/196 (50%), Gaps = 30/196 (15%)
Query: 524 DVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFA 583
D+I GGPPCQG S N+ +N D+ D +N F+ I L P ++MENV +I+K A
Sbjct: 73 DIILGGPPCQGFSIANK-KNGDH--KDPRNSLFEEFLRIGRILSPMVMIMENVPNIIK-A 128
Query: 584 KGLLGRYAL----ARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPT 639
K G + + L + Y V ++ + +G+PQ R R+F+ ++ E P+ PT
Sbjct: 129 KTKDGIFVVDIIKEELSSLGYHVYHNILESTDFGVPQIRKRLFIIASR-KELKNPFPKPT 187
Query: 640 HDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPE 699
H++ G L + L DAISDLP ++ E +E+ YD++
Sbjct: 188 HNIT------------------GSDG-LKKTPTLWDAISDLPQINAREGSEEMDYDKQAL 228
Query: 700 TEFQCFIRLRKDGKKL 715
T++Q +LR++ K+
Sbjct: 229 TDYQK--QLRENSHKI 242
Score = 43.5 bits (101), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 36/61 (59%), Gaps = 6/61 (9%)
Query: 339 VKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAED 398
VK+LD ++G G G LG ++AG ++ A++++ +A ++ K NHPE+ V +
Sbjct: 4 VKVLDTFAGAG----GFSLGFHMAGAEIIG--AIEVDSWATETFKFNHPESLVIKKDISQ 57
Query: 399 F 399
F
Sbjct: 58 F 58
>gi|406865911|gb|EKD18952.1| beta-Ala-His dipeptidase [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 2005
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 89/211 (42%), Gaps = 32/211 (15%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP VD I GGPPC G S N + P KN + ++ VDF +PK+ L+ENV
Sbjct: 1612 LPFRDQVDFIKGGPPCPGYSVANCQKKDGEP----KNSLVALYSAYVDFYRPKYSLIENV 1667
Query: 577 VDIVKFA-----------------KGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRM 619
++ G + R M YQV+ ++ A +G PQ R
Sbjct: 1668 TGLIHHTLRTPESNDFKTKPETLENGTI-RMIYRTYTSMGYQVQCAVLYAEEHGSPQSRP 1726
Query: 620 RVFLWGAQPTEKLPPYALPTHDVVLRGVIP-----TEFERNTVAYDEGQQAELARKLLLQ 674
RV +W QP +LP Y P H R P ++ ++ + +++ R + L
Sbjct: 1727 RVIIWATQPGCRLPEYPQPEHLWKTRAACPIFMPGSKLNQSDFHWHRKRRSTPHRVVTLG 1786
Query: 675 DAISDLPSVDNYESRDEIPYDREPETEFQCF 705
DA DLP D P+ P+T FQ F
Sbjct: 1787 DAWIDLPEYDIKN-----PHLIIPQTRFQKF 1812
>gi|109638623|ref|YP_656628.1| ORF120 [Ranid herpesvirus 2]
gi|109138110|gb|ABG25588.1| ORF120 [Ranid herpesvirus 2]
Length = 861
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 83/168 (49%), Gaps = 13/168 (7%)
Query: 518 PLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVV 577
P PG V+ + GGPPCQG SG N F + A EK + ++ ++ + + PK ++ENV
Sbjct: 495 PRPGQVECLVGGPPCQGFSGCNFFPKGEK--AGEKRQMMVEYLRMCEMYLPKLFILENVQ 552
Query: 578 DIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQP----TEKLP 633
+ G + + L +L+ + Y V G++ AG YGLPQ R R+ + A+ + LP
Sbjct: 553 NFTVQEDGAVFKAVLHKLLSLQYSVLCGVVQAGMYGLPQSRRRLLIVAARDDFPLPDMLP 612
Query: 634 PYALPTHDVVLRGVIPTE-FERNTVAYDEGQQAELARKLLLQDAISDL 680
P LR TE FE V + R + L++AI DL
Sbjct: 613 PQLHAFAPSALRLCNSTEKFEPLHVT------VPIFRTITLREAIMDL 654
>gi|179506952|gb|ACB86652.1| EagI methylase [Pantoea agglomerans]
Length = 401
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 91/209 (43%), Gaps = 29/209 (13%)
Query: 521 GDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIV 580
G++D++ GGPPCQG S R D D +N ++ + + LKPK +L+ENV IV
Sbjct: 73 GELDLLAGGPPCQGFSINAPIRTLD----DTRNHLFKDYLRVAEVLKPKAILIENVPGIV 128
Query: 581 KFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTH 640
KG + L +M Y V ++ AG YG+PQ R R K + P
Sbjct: 129 SLGKGTVVEQIYKELNRMGYSVAHKILFAGHYGVPQMRFRTIFIAIYGHGKSISFPEP-- 186
Query: 641 DVVLRGVIPTEFERNTVAYDEGQQA-----------ELARKLLLQDAISDLPSVDNYESR 689
E+ VA G + +L + DAISDLP +
Sbjct: 187 ----------EYNAKAVANFAGSKELCFQVPPLFADQLIPHTTVWDAISDLPPITGGNGS 236
Query: 690 DEIPYDREPETEFQCFIRLRKDGKKLWFN 718
+E Y +P++++Q LR+D + +N
Sbjct: 237 NESVYLSQPKSDYQKV--LRQDSPNIIYN 263
>gi|425441645|ref|ZP_18821915.1| Cytosine specific DNA methyltransferase (modular protein)
[Microcystis aeruginosa PCC 9717]
gi|389717574|emb|CCH98349.1| Cytosine specific DNA methyltransferase (modular protein)
[Microcystis aeruginosa PCC 9717]
Length = 381
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 96/199 (48%), Gaps = 19/199 (9%)
Query: 522 DVDVICGGPPCQGVS-----GFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
++ + GGPPCQG S G+ R+ N D +N F+ V +P V+MENV
Sbjct: 72 ELTALIGGPPCQGFSRNIPAGY-RYLN------DSRNHLYKSFLGFVQEFRPLHVVMENV 124
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+I+K G++ +A L YQV + A YG+PQ R R F + E+LP
Sbjct: 125 PEILKAYNGIIRDEIVAHLESWGYQVVTTSLNAAYYGVPQTRSRAFFLAS--LERLPSLP 182
Query: 637 LPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDR 696
TH +R + E +A ++DAISDLP+++ ++ D Y R
Sbjct: 183 QATHSGDIRSDYKAVKSWTQLTLLE---PNIAPVTTVKDAISDLPTLEAGQAYDHEIYTR 239
Query: 697 EPETEFQCFIRLRKDGKKL 715
EPET +Q ++R+ +K+
Sbjct: 240 EPETIYQQ--KMREQSQKI 256
>gi|374572064|ref|ZP_09645160.1| DNA-methyltransferase Dcm [Bradyrhizobium sp. WSM471]
gi|374420385|gb|EHQ99917.1| DNA-methyltransferase Dcm [Bradyrhizobium sp. WSM471]
Length = 338
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 95/208 (45%), Gaps = 40/208 (19%)
Query: 502 EKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFN-RFRNKDNPLADEKNKQLIVFM 560
+ I+E + + LPL V+ GGPPCQG S N R R + NP N + F+
Sbjct: 38 QDIREVTSFDLPKRDLPL-----VVFGGPPCQGFSTSNQRTRTRANP----SNWLFLEFL 88
Query: 561 DIVDFLKPKFVLMENVVDIVKFAKG-LLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRM 619
+VD L P++++ ENV IV G LGR ++L Y+V ++ A +G+PQ R
Sbjct: 89 RVVDLLGPEWLVFENVAGIVHTEGGYFLGRLE-SQLKSRGYRVSSALLNAADFGIPQRRT 147
Query: 620 RVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISD 679
R FL G++ E+ PP P D V V +DAI D
Sbjct: 148 RFFLIGSR--EQSPPSLSPPGDPVATTV--------------------------RDAIWD 179
Query: 680 LPSVDNYESRDEIPYDREPETEFQCFIR 707
LP + N S+D PY + + + +R
Sbjct: 180 LPVLRNGSSKDVRPYRTQAVSAYSLALR 207
>gi|156936516|ref|YP_001440431.1| hypothetical protein ESA_pESA2p06562 [Cronobacter sakazakii ATCC
BAA-894]
gi|156534770|gb|ABU79595.1| hypothetical protein ESA_pESA2p06562 [Cronobacter sakazakii ATCC
BAA-894]
Length = 415
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 102/214 (47%), Gaps = 13/214 (6%)
Query: 504 IKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIV 563
I+E H ++ + G++D+I GGPPCQG S R+ + D +N ++ V
Sbjct: 67 IREVDAHKIRNLLGLKRGELDLIAGGPPCQGFSINAPKRSTE----DSRNHLFREYLRFV 122
Query: 564 DFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFL 623
+P+ VL+ENV +V F G L L + Y+ + ++ A YG+PQ R R +
Sbjct: 123 SEFQPRAVLIENVPGMVSFEGGATLDAILESLKNLGYEADVRILYAPHYGIPQTRWRTII 182
Query: 624 WGAQ----PTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISD 679
G + PTE P P +R ++F + + EL + ++DAI D
Sbjct: 183 LGCRDGLNPTELFPE---PLRQAPVRVNFTSQFGGKNLV-NLPISLELPSHVTVRDAIGD 238
Query: 680 LPSVDNYESRDEI-PYDREPETEFQCFIRLRKDG 712
LPS+ N E +++ Y + ++Q +R+ DG
Sbjct: 239 LPSLCNGEIGEQVKSYRHSADNQYQKLMRIGSDG 272
>gi|390441689|ref|ZP_10229729.1| Cytosine specific DNA methyltransferase (modular protein)
[Microcystis sp. T1-4]
gi|389835002|emb|CCI33855.1| Cytosine specific DNA methyltransferase (modular protein)
[Microcystis sp. T1-4]
Length = 381
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 99/201 (49%), Gaps = 23/201 (11%)
Query: 522 DVDVICGGPPCQGVS-----GFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
++ + GGPPCQG S G+ R+ N D +N F+ V +P V+MENV
Sbjct: 72 ELTALIGGPPCQGFSRNIPAGY-RYLN------DSRNHLYKSFLGFVQEFRPLHVVMENV 124
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+I+K G++ +A L YQV + A YG+PQ R R F + E+LP
Sbjct: 125 PEILKAYGGIIRDEIVAHLESWGYQVVTTSLNAAYYGVPQTRSRAFFLAS--LERLPSLP 182
Query: 637 LPTHDVVLRGVIPT--EFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPY 694
TH +R + + TV + +A ++DAISDLP+++ ++ D Y
Sbjct: 183 QATHSGDIRSDYKAVKSWTQLTVL-----EPNIAPVTTVKDAISDLPTLEAGQAYDHEIY 237
Query: 695 DREPETEFQCFIRLRKDGKKL 715
REPET +Q ++R+ +K+
Sbjct: 238 TREPETIYQQ--KMREQSQKI 256
>gi|427717809|ref|YP_007065803.1| DNA-cytosine methyltransferase [Calothrix sp. PCC 7507]
gi|427350245|gb|AFY32969.1| DNA-cytosine methyltransferase [Calothrix sp. PCC 7507]
Length = 413
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 96/196 (48%), Gaps = 32/196 (16%)
Query: 524 DVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFA 583
D++ GGPPCQG S + +P D +N I F + FL+P+ ++ENV
Sbjct: 75 DIVIGGPPCQGFSIAGP--AQKDP-KDPRNSLFINFAHWICFLQPRAFVIENV------- 124
Query: 584 KGLLGR-----YALARLIQ-----MNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKL- 632
KGLL R + +IQ + Y V + ++ A YG+PQ R R+F+ G + +KL
Sbjct: 125 KGLLSRKNFEGIKVIDIIQKTFEDLGYFVEVWLLNAAEYGVPQIRERIFVVGNKMGKKLG 184
Query: 633 -PPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDE 691
PP TH + L N+ + L L + DAISDLPS++ E ++E
Sbjct: 185 IPP---KTHSLDL-------LLTNSSQLSVLKNMNLLPSLSVWDAISDLPSLNAREGKEE 234
Query: 692 IPYDREPETEFQCFIR 707
PY +P +Q +IR
Sbjct: 235 QPYISKPHNNYQHWIR 250
>gi|428776676|ref|YP_007168463.1| DNA-cytosine methyltransferase [Halothece sp. PCC 7418]
gi|428690955|gb|AFZ44249.1| DNA-cytosine methyltransferase [Halothece sp. PCC 7418]
Length = 430
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 88/167 (52%), Gaps = 20/167 (11%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
++DV+CGGPPCQG S + L DE+N + F+ +V LKPK+ +MENV +
Sbjct: 78 EIDVVCGGPPCQGFSLIGK-----RVLEDERNALVFHFLRLVLELKPKYFVMENVAGMAI 132
Query: 582 FAKGLLGRYALARLIQMNYQVRM--GMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPT 639
L + + + +Y+V++ ++ A +G+PQ R R+FL G + + LP Y +P
Sbjct: 133 GKSQQLLNELIEKFQKNDYKVQLPYQVLNASNFGVPQNRNRLFLLGCRSDQTLPDYPIPI 192
Query: 640 HDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNY 686
P + + N++ G Q + ++DA+ DLP ++NY
Sbjct: 193 TQ-------PAKSQANSI---NGHQPD---SPTVKDALIDLPLIENY 226
>gi|256397638|ref|YP_003119202.1| DNA-cytosine methyltransferase [Catenulispora acidiphila DSM 44928]
gi|256363864|gb|ACU77361.1| DNA-cytosine methyltransferase [Catenulispora acidiphila DSM 44928]
Length = 389
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 89/188 (47%), Gaps = 13/188 (6%)
Query: 522 DVDVICGGPPCQGVSGF--NRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDI 579
+VDVI GGPPCQG S NR N D+P +N F V + +P+ + ENVV +
Sbjct: 74 EVDVIIGGPPCQGFSSIRPNRSTNYDDP----RNTLFEEFAAYVGYWRPRVFVFENVVGL 129
Query: 580 VKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPT 639
+G+ Q+ Y ++ A +G+PQ R R+ L GAQ KL + PT
Sbjct: 130 ATHQRGVDLDAIQESFSQLGYTTDWRILNAAHFGVPQKRERLILLGAQQGVKL-RWPRPT 188
Query: 640 HDVVLRGVI---PTEFERNTVA-YDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYD 695
H R + P R + +EL L ++DAI DLP + + E+ + YD
Sbjct: 189 HHGNFRTIGHQDPARLLRPSQPDLFSDSSSELPAALTVRDAIDDLPPIGSGEAAER--YD 246
Query: 696 REPETEFQ 703
R T++Q
Sbjct: 247 RPARTDYQ 254
>gi|67922668|ref|ZP_00516173.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501]
gi|67855516|gb|EAM50770.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501]
Length = 282
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 108/244 (44%), Gaps = 51/244 (20%)
Query: 483 NYGPSEDTWEPIEGLSNCGEKIKEFV-THGFKSKIL-------------PLPGDVDVICG 528
+YG + +E I G+ N + + F H IL + +DVI G
Sbjct: 20 SYGFQQAGFEVIAGIDNWKDALATFQKNHPTSQGILMDLAVASSSKISQQINKSIDVIVG 79
Query: 529 GPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLG 588
GPPCQG S + RN D+P +N F+ ++D+ +PK ++MENV ++V A+G +
Sbjct: 80 GPPCQGFSISGK-RNPDDP----RNLLYKSFLRVIDYFQPKAIVMENVPNMVSMAQGRIR 134
Query: 589 RYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVI 648
L L ++ YQV+ ++ A YG+PQ R RV G +
Sbjct: 135 EQILTDLGRLGYQVQYKILLASDYGVPQNRRRVIFVG----------------------V 172
Query: 649 PTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYES-RDEIPYDREPETEFQCFIR 707
P +E N + G E K+ A++DLP ES D PY P + +Q +R
Sbjct: 173 PKNYEFN---FPIGDFTE--NKITCSQAMNDLPE----ESMTDGEPYPINPLSSYQKLMR 223
Query: 708 LRKD 711
+ D
Sbjct: 224 IGSD 227
>gi|416389243|ref|ZP_11685287.1| putative 5-methylcytosine methyltransferase [Crocosphaera watsonii
WH 0003]
gi|357264261|gb|EHJ13173.1| putative 5-methylcytosine methyltransferase [Crocosphaera watsonii
WH 0003]
Length = 291
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 108/244 (44%), Gaps = 51/244 (20%)
Query: 483 NYGPSEDTWEPIEGLSNCGEKIKEFV-THGFKSKIL-------------PLPGDVDVICG 528
+YG + +E I G+ N + + F H IL + +DVI G
Sbjct: 20 SYGFQQAGFEVIAGIDNWKDALATFQKNHPTSQGILMDLAVASSSKISQQINKSIDVIVG 79
Query: 529 GPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLG 588
GPPCQG S + RN D+P +N F+ ++D+ +PK ++MENV ++V A+G +
Sbjct: 80 GPPCQGFSISGK-RNPDDP----RNLLYKSFLRVIDYFQPKAIVMENVPNMVSMAQGRIR 134
Query: 589 RYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVI 648
L L ++ YQV+ ++ A YG+PQ R RV G +
Sbjct: 135 EQILTDLERLGYQVQYKILLASDYGVPQNRRRVIFVG----------------------V 172
Query: 649 PTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYES-RDEIPYDREPETEFQCFIR 707
P +E N + G E K+ A++DLP ES D PY P + +Q +R
Sbjct: 173 PKNYEFN---FPIGDFTE--NKITCSQAMNDLPE----ESMTDGEPYPINPLSSYQKLMR 223
Query: 708 LRKD 711
+ D
Sbjct: 224 IGSD 227
>gi|428203215|ref|YP_007081804.1| DNA-methyltransferase Dcm [Pleurocapsa sp. PCC 7327]
gi|427980647|gb|AFY78247.1| DNA-methyltransferase Dcm [Pleurocapsa sp. PCC 7327]
Length = 418
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 85/171 (49%), Gaps = 26/171 (15%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIV- 580
D+DV+ GGPPCQG S + R D+P +N + F+ +V LKPKF +MENV +
Sbjct: 79 DIDVVFGGPPCQGFSLIGK-RVVDDP----RNSLVFQFLRVVLELKPKFFVMENVRGLAV 133
Query: 581 ----KFAKGLLGRYAL-ARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPY 635
K + L+ + L +Q NYQV + A YG+PQ R R+FL GA+ +LP Y
Sbjct: 134 GKQQKILETLIQEFQLQGYQVQKNYQV----LNAACYGVPQARERLFLLGAREDFELPKY 189
Query: 636 ALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNY 686
P I N Y + + L + DAI DLP V++Y
Sbjct: 190 PQP---------ITQPVRLNNFKYK--KLSNLPTAPTVWDAIGDLPEVEHY 229
>gi|440636281|gb|ELR06200.1| hypothetical protein GMDG_07855 [Geomyces destructans 20631-21]
Length = 1529
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 73/123 (59%), Gaps = 9/123 (7%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIV-FMDIVDFLKPKFVLMEN 575
+PLPGD+D I G PC G S N NKD+ KN+ LI ++DF +PK+ L+EN
Sbjct: 800 IPLPGDIDFIAAGSPCVGYSILNP--NKDSAQG-LKNQSLIADVASMIDFYRPKYALLEN 856
Query: 576 VVDIVKFAKGLLGRYALARLI----QMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEK 631
V+ + + KG +L++LI M YQ+++ ++ A ++G PQ R R+F+ A P K
Sbjct: 857 VLTMAQKGKGR-NHDSLSQLICCIVGMGYQLQVYVLDAWSFGSPQGRSRLFVSVAAPGFK 915
Query: 632 LPP 634
LPP
Sbjct: 916 LPP 918
>gi|111185554|gb|AAI19484.1| Dnmt1 protein [Mus musculus]
Length = 197
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 56/89 (62%), Gaps = 2/89 (2%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P+F L+ENV
Sbjct: 108 LPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRPRFFLLENV 165
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMG 605
+ V + + ++ + L L++M YQ G
Sbjct: 166 RNFVSYRRSMVLKLTLRCLVRMGYQCTFG 194
Score = 42.7 bits (99), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 5/69 (7%)
Query: 339 VKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAED 398
++ LD++SGCG +S G + AG++ T WA+++ + A Q+ +LN+P T V E
Sbjct: 36 LRTLDVFSGCGGLSEGF----HQAGIS-ETLWAIEMWDPAAQAFRLNNPGTTVFTEDCNV 90
Query: 399 FLTLLREWE 407
L L+ E
Sbjct: 91 LLKLVMAGE 99
>gi|297788908|ref|XP_002862484.1| hypothetical protein ARALYDRAFT_920657 [Arabidopsis lyrata subsp.
lyrata]
gi|297308026|gb|EFH38742.1| hypothetical protein ARALYDRAFT_920657 [Arabidopsis lyrata subsp.
lyrata]
Length = 163
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LPLPG VD I GGPPCQG SG NRF D + + + ++ F+ D+ +PK+ L+ENV
Sbjct: 79 LPLPGQVDFINGGPPCQGFSGMNRF--SDRSWSKVQCEMILAFLSFADYFRPKYFLLENV 136
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQ 601
IV F G + +A L++M YQ
Sbjct: 137 KKIVSFNNGQTFQLTIASLLEMGYQ 161
>gi|310796311|gb|EFQ31772.1| C-5 cytosine-specific DNA methylase [Glomerella graminicola M1.001]
Length = 1141
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 72/142 (50%), Gaps = 9/142 (6%)
Query: 504 IKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIV-FMDI 562
++ G SK +P G VD + GG PC GF+R N KN+ L+ F
Sbjct: 672 LQTLALQGKFSKKVPPVGSVDFVSGGSPC---PGFSRLTNDKATPEQRKNQSLVAAFASF 728
Query: 563 VDFLKPKFVLMENVVDIV----KFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFR 618
+D +PKF L+ENV+DIV K + + + A ++ + YQ +M + AYG PQ R
Sbjct: 729 IDVYRPKFGLLENVMDIVQTKTKRNEDVFSQLICA-IVGLGYQTHFFIMDSWAYGSPQSR 787
Query: 619 MRVFLWGAQPTEKLPPYALPTH 640
RVFL A P KLP + +H
Sbjct: 788 SRVFLCFAAPGLKLPEVPIQSH 809
>gi|425462210|ref|ZP_18841684.1| Cytosine specific DNA methyltransferase (modular protein)
[Microcystis aeruginosa PCC 9808]
gi|389824798|emb|CCI25960.1| Cytosine specific DNA methyltransferase (modular protein)
[Microcystis aeruginosa PCC 9808]
Length = 381
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 96/199 (48%), Gaps = 19/199 (9%)
Query: 522 DVDVICGGPPCQGVS-----GFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
++ + GGPPCQG S G+ R+ N D +N F+ V +P V+MENV
Sbjct: 72 ELTALIGGPPCQGFSRNIPAGY-RYLN------DSRNHLYKSFLGFVQEFRPLHVVMENV 124
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+I+K G++ +A L YQV + A YG+PQ R R F + ++LP
Sbjct: 125 PEILKAYGGIIRDEIVAHLESWGYQVVTTSLNAAYYGVPQTRSRAFFLAS--LDRLPSLP 182
Query: 637 LPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDR 696
TH +R + E +A ++DAISDLP+++ ++ D Y R
Sbjct: 183 QATHSGDIRSDYKAVKSWTQLTLLE---PNIAPVTTVKDAISDLPTLEAGQAYDHEIYTR 239
Query: 697 EPETEFQCFIRLRKDGKKL 715
EPET +Q ++R+ +K+
Sbjct: 240 EPETIYQQ--KMREQSQKI 256
>gi|345867871|ref|ZP_08819872.1| DNA-cytosine methyltransferase family protein [Bizionia
argentinensis JUB59]
gi|344047793|gb|EGV43416.1| DNA-cytosine methyltransferase family protein [Bizionia
argentinensis JUB59]
Length = 387
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 97/207 (46%), Gaps = 35/207 (16%)
Query: 504 IKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIV 563
+++ T KS I P DV+ GGPPCQG S N+ RNK +D +N+ F+ +V
Sbjct: 52 LRDISTAEIKSIISRTP---DVVIGGPPCQGFSLANKNRNKVK--SDPRNELFYEFVRVV 106
Query: 564 DFLKPKFVLMENVVDIVKFAKGLLGRYALARL--IQMNYQVRMGMMAAGAYGLPQFRMRV 621
L+PK +MENV ++ KG + + + YQV ++ A YG+PQ R RV
Sbjct: 107 TDLQPKAFVMENVRGLLSMQKGEVIKLMKEEFENAGIGYQVDYKVLLASDYGVPQNRHRV 166
Query: 622 FLWGAQP-TEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDL 680
+ G + EK P + P + N V + +AISDL
Sbjct: 167 IMIGIRKDLEKQP-------------LFPNKTYENPVT--------------VWEAISDL 199
Query: 681 PSVDNYESRDEIPYDREPETEFQCFIR 707
P + E +++ Y+ +PE FQ FIR
Sbjct: 200 PQIKASEGDEKMMYETDPENNFQEFIR 226
>gi|343427737|emb|CBQ71263.1| related to Cytosine-specific methyltransferase [Sporisorium
reilianum SRZ2]
Length = 768
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 92/199 (46%), Gaps = 16/199 (8%)
Query: 499 NCGEKIKEFVTHGFKSKILPLP--GDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQL 556
+ G+ ++ ++ ++ +P P G VDVI GPPCQG S NR ++ D +N +
Sbjct: 364 DAGDALRRAISGRLSAQGVPFPQRGQVDVISAGPPCQGFSHRNRTAPREAAQQDPRNLLV 423
Query: 557 IVFMDIVDFLKPKFVLMENVVDIVKFAKGLLG-------RYALARLIQMNYQVRMGMMAA 609
+ V+ L+PK++++ENV F LG + + L+ + Y G + +
Sbjct: 424 CTVLGWVEHLQPKYLILENVEG---FTDSKLGGRKQGMVKLVMKCLLDLGYAATCGFVQS 480
Query: 610 GAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELAR 669
GA G PQ R R L A+ LP LPTH + R P + T Q+A A
Sbjct: 481 GASGCPQSRGRFILLAARRDLVLPRLPLPTHQFLGRKANPFTWTDGTGKTYAAQRASSAA 540
Query: 670 KLL----LQDAISDLPSVD 684
+L + DAI DL D
Sbjct: 541 AMLPAITVSDAIGDLSRFD 559
>gi|317054725|ref|YP_004103193.1| cytosine specific DNA methyltransferase [Paracoccus aminophilus]
gi|294869157|gb|ADF47149.1| cytosine specific DNA methyltransferase [Paracoccus aminophilus]
Length = 363
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 92/194 (47%), Gaps = 20/194 (10%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+DV+CGGPPCQG S + R D+P +N+ + F+ +V+ + P+F + ENV I
Sbjct: 70 IDVLCGGPPCQGFSLAGK-RLTDDP----RNQLFLEFVRMVNLINPRFFVFENVSGITSM 124
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
+ G + L Y+ ++ A YG+PQ R R FL G + EK + P+H
Sbjct: 125 SGGAILEAILQEFRTSGYECFFKVLNAADYGVPQARPRFFLIGTRDGEKY-NFPDPSH-- 181
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
PT + ++ + + R L + DA+SDLP ++ E +E+ + +
Sbjct: 182 -----APT-------SVNDLFLSNMPRHLNVWDALSDLPYIEQGEGSEEMKNSTQAHNAY 229
Query: 703 QCFIRLRKDGKKLW 716
Q R + L+
Sbjct: 230 QLERRGNRSAGTLF 243
>gi|170088424|ref|XP_001875435.1| C5-DNA-methyltransferase [Laccaria bicolor S238N-H82]
gi|164650635|gb|EDR14876.1| C5-DNA-methyltransferase [Laccaria bicolor S238N-H82]
Length = 1309
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 85/190 (44%), Gaps = 25/190 (13%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
VD I GGPPCQ S N R K+ D ++ + V++ P + L+ENV ++
Sbjct: 901 VDFIFGGPPCQSFSLANHHRKKN----DIRSTLPCSMLSYVEYYNPDYFLLENVRGLLSH 956
Query: 583 A----------KGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKL 632
+ + ++ + + YQ+ ++ A YG PQ R RV WGA+ L
Sbjct: 957 TLQDGRTNTVVQAGMVKFICRTSLALGYQIHYKLLQASHYGTPQGRSRVIFWGAKQGLVL 1016
Query: 633 PPYALPTHDVVLR---------GVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSV 683
P + LP+H R G IP R+ ++ D Q A L + +L+ DAI DLP
Sbjct: 1017 PQFPLPSHAFEGRLACPSLPTGGHIPPP-SRSKISGDYHQYAPL-KPILVDDAIGDLPPF 1074
Query: 684 DNYESRDEIP 693
+ IP
Sbjct: 1075 EWTNPHQVIP 1084
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 46/110 (41%), Gaps = 6/110 (5%)
Query: 200 ESGEEDYICKIVEMFEAVDG---TPYFTAQWYYRARDTVIESNAHLIDQRRVFFSEIQND 256
+ G+ + C I FE T F QW+ +TV++ AH R +F +
Sbjct: 511 QYGQNWWFCYITHFFEHQSQKGRTKMFHGQWFVHGSETVLQETAH---SRALFLLNSCDS 567
Query: 257 NPLECLVKKLNIARVPLNIDLEAKKLAIPHCDYYCDMMYLLPYSTFFSLP 306
NP+ + +K N + L A+ D++C +Y ++ F +P
Sbjct: 568 NPINAIYQKCNFRFLELGEQEPFDDFAVDANDFHCSYLYDDDHAKFTHIP 617
>gi|299753284|ref|XP_001833175.2| hypothetical protein CC1G_01237 [Coprinopsis cinerea okayama7#130]
gi|298410229|gb|EAU88864.2| hypothetical protein CC1G_01237 [Coprinopsis cinerea okayama7#130]
Length = 1253
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 97/222 (43%), Gaps = 41/222 (18%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
++D I GGPPCQG S N R ++ D + + + + P + L+ENV ++
Sbjct: 830 NIDFILGGPPCQGFSRANHTRKEN----DIRTTMPVNMLSYAEHYDPTYFLLENVTGLLD 885
Query: 582 FA--------------KGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQ 627
F +G+L ++ + LI + YQV ++ A YG+PQ R R+ +W A+
Sbjct: 886 FKLRDHRLGSNGEIIERGML-KFIVRALIALGYQVHWNVLQAAQYGVPQSRNRLIIWAAK 944
Query: 628 PTEKLPPYALPTHDVVLRGVIPT---------EFERNTVAYDEGQQAELARKLLLQ--DA 676
LP + +PTH G P R + + G+ + A L + DA
Sbjct: 945 RGATLPKFPVPTHAFEGNGHRPKILGSASSLPNVSRALIPDEHGRYHQCAPFLPISIFDA 1004
Query: 677 ISDLPSVDNYESRDEIPYDREPETEFQCFIRLRKDGKKLWFN 718
I+DLP+ + PY +P + ++ +LWF
Sbjct: 1005 IADLPAFEWSN-----PYLIQP------YPAMQDTTHRLWFG 1035
>gi|421735907|ref|ZP_16174779.1| hypothetical protein B217_02580 [Bifidobacterium bifidum IPLA
20015]
gi|407296797|gb|EKF16307.1| hypothetical protein B217_02580 [Bifidobacterium bifidum IPLA
20015]
Length = 398
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 90/192 (46%), Gaps = 13/192 (6%)
Query: 521 GDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIV 580
G +D++ GGPPCQG S R+ ++P +N ++ VD +P+ +L+ENV +V
Sbjct: 77 GQLDLVAGGPPCQGFSINAPVRSNEDP----RNHLFREYLRYVDAFQPRAILIENVPGLV 132
Query: 581 KFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQ----PTEKLPPYA 636
F G L L + Y + ++ A YG+PQ R R + G + P P
Sbjct: 133 SFEHGGTLHAILDALADLGYGADVHILGAPYYGVPQMRWRTIILGLRGAVIPQSAWPE-- 190
Query: 637 LPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIP-YD 695
PT +R T F+ + + + A L++AI DLPS+ N E + + Y
Sbjct: 191 -PTRHAPVRANFTTTFDGRQIVKQPSPETD-APFTTLREAIGDLPSLQNGERGEAVKEYP 248
Query: 696 REPETEFQCFIR 707
P+ ++Q +R
Sbjct: 249 VRPQCDYQRALR 260
>gi|331085773|ref|ZP_08334856.1| hypothetical protein HMPREF0987_01159 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330406696|gb|EGG86201.1| hypothetical protein HMPREF0987_01159 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 356
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 86/185 (46%), Gaps = 30/185 (16%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+DVI GPPCQG S RN D DE+NK + +++V +PK ++ENV +
Sbjct: 70 IDVIIAGPPCQGFS-LTGPRNFD----DERNKLYLAVIEMVKQYQPKAFIIENVPGMATL 124
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG + L R +M Y + ++ A YG+PQ R R+ G + P + +V
Sbjct: 125 YKGQIKDEILRRFKKMGYNIECRILCAADYGVPQIRKRLIFMGIRKDIGAPKFP----EV 180
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
L P + + + A+SDLPS+ N +E Y REP+TE+
Sbjct: 181 KL---TPENY------------------ITCRAAVSDLPSLQNDLGMEEAEYIREPQTEY 219
Query: 703 QCFIR 707
Q +R
Sbjct: 220 QRLMR 224
>gi|310657622|ref|YP_003935343.1| Cytosine-specific methyltransferase [[Clostridium] sticklandii]
gi|308824400|emb|CBH20438.1| Cytosine-specific methyltransferase [[Clostridium] sticklandii]
Length = 344
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 89/187 (47%), Gaps = 39/187 (20%)
Query: 523 VDVICGGPPCQG--VSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIV 580
+D+I GGPPCQG +SG +F D +N+ + F+ +V ++PK ++ENV +V
Sbjct: 69 IDLIVGGPPCQGMSLSGPRKFE-------DPRNELYLSFIRLVKEIQPKAFVIENVPGLV 121
Query: 581 KFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTH 640
KG + + + +M Y+VR +M A YG+PQ R RV G Q E P + T+
Sbjct: 122 SLFKGKIKDSIIEKFSEMGYKVRFEIMCASDYGVPQSRKRVIFVGHQDKEFEFPEKMNTY 181
Query: 641 DVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPET 700
+ + A+SDLP +++ +E PY ++P+
Sbjct: 182 ------------------------------VTCEMALSDLPPLEDCLGNEESPYYKDPQN 211
Query: 701 EFQCFIR 707
++Q +R
Sbjct: 212 DYQQIMR 218
>gi|330997449|ref|ZP_08321300.1| DNA (cytosine-5-)-methyltransferase [Paraprevotella xylaniphila YIT
11841]
gi|329570823|gb|EGG52539.1| DNA (cytosine-5-)-methyltransferase [Paraprevotella xylaniphila YIT
11841]
Length = 357
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 86/189 (45%), Gaps = 38/189 (20%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
VD+I GGPPCQG S RN D D++NK + ++ V KPK L+ENV +
Sbjct: 75 VDIIIGGPPCQGFS-LTGPRNID----DQRNKLYLAMIETVRRFKPKAFLIENVPGMANL 129
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWG---AQPTEKLP-PYALP 638
G + + R QM Y+V ++ A YG+PQ R R+ G ++ + + P PY LP
Sbjct: 130 YGGAVKEEIIRRFTQMGYKVSCKIVCAADYGVPQIRKRLVFIGLRDSKASYEFPVPYRLP 189
Query: 639 THDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREP 698
+ L +DAISDLP++ + + Y+ EP
Sbjct: 190 DN-----------------------------YLTCEDAISDLPALVDTLGEEVGKYEMEP 220
Query: 699 ETEFQCFIR 707
+FQ +R
Sbjct: 221 LNDFQKLMR 229
>gi|421717606|ref|ZP_16156908.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R038b]
gi|407223113|gb|EKE92906.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R038b]
Length = 584
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 94/195 (48%), Gaps = 35/195 (17%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
++++I GGPPCQG S + K+ L D +N + +++IV +KP+ ++ENV +I+
Sbjct: 301 EINMIIGGPPCQGFSN----KGKNLGLKDPRNFLFLEYIEIVKAIKPEIFIIENVKNIIS 356
Query: 582 FAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHD 641
AKG RL + YQ+ ++ A YG+PQ R R F+ GA
Sbjct: 357 CAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGAS-------------- 402
Query: 642 VVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETE 701
F+ N + EL++ + +QDAISDL + + E E Y ++
Sbjct: 403 -------RFSFDFNLL--------ELSQSVNVQDAISDLAYLCSNEGAFESDYLNPIQSS 447
Query: 702 FQCFIRLRKDGKKLW 716
+Q +RK+ KL+
Sbjct: 448 YQAL--MRKNSPKLY 460
Score = 42.4 bits (98), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
VD++ PPCQG+S N + D ++N +I +D++ +KP+F ++ENV+ K
Sbjct: 86 VDLVVATPPCQGMSVANHKKKNDEI---KRNSLVIESIDLIKQIKPRFFILENVLSFYK 141
>gi|17232307|ref|NP_488855.1| site-specific DNA-methyltransferase [Nostoc sp. PCC 7120]
gi|17133952|dbj|BAB76514.1| site-specific DNA-methyltransferase [Nostoc sp. PCC 7120]
Length = 414
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 96/196 (48%), Gaps = 32/196 (16%)
Query: 524 DVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFA 583
D+I GGPPCQG S + +P D +N I F + FL+PK +MENV
Sbjct: 76 DIIIGGPPCQGFSIAGP--AQKDP-KDPRNGLFINFAQWIKFLEPKAFVMENV------- 125
Query: 584 KGLLGR-----YALARLI-----QMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLP 633
KGLL R + + +I ++ Y V + ++ A YG+PQ R R+F+ G + + L
Sbjct: 126 KGLLSRKNAEGFKVIDIIKKTFEELGYFVEVWVLNAAEYGIPQIRERIFIVGNKKGKVL- 184
Query: 634 PYALP--THDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDE 691
+P TH + + ++ +D+ + L L DAISDLP ++ E +E
Sbjct: 185 --GIPKKTHSLQFLNLNRSQLS----IFDD---MSIIPALTLWDAISDLPELNAREGSEE 235
Query: 692 IPYDREPETEFQCFIR 707
PY +P+ +Q + R
Sbjct: 236 QPYHLKPQNTYQTWAR 251
>gi|347533667|ref|YP_004842380.1| DNA methylase C-5 cytosine-specific family protein [Sphingobium
chungbukense]
gi|345452348|gb|AEN94388.1| DNA methylase C-5 cytosine-specific family protein [Sphingobium
chungbukense]
Length = 389
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 86/187 (45%), Gaps = 28/187 (14%)
Query: 521 GDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIV 580
G++DVI GGPPCQG S +N R ++P A + ++ IV ++P++++MENV I
Sbjct: 75 GEIDVIVGGPPCQGYSVYNHQRGVNDPRAGLFRE----YLRIVKGIQPRWIVMENVTGIT 130
Query: 581 KFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTH 640
G + + + Y+V M ++ A YG+PQ R RVF
Sbjct: 131 SIGGGGIVHEIFEGMKSLGYRVDMKVLRAEEYGVPQERRRVFF----------------- 173
Query: 641 DVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPET 700
+ R P F T L + + DAISDLP ++N + PY + P+
Sbjct: 174 -IATRTDAPILFPEQT------HGPGLLPFVTVWDAISDLPKLENGDRAGPRPYGKRPQN 226
Query: 701 EFQCFIR 707
+Q +R
Sbjct: 227 SYQALLR 233
>gi|393245839|gb|EJD53349.1| S-adenosyl-L-methionine-dependent methyltransferase [Auricularia
delicata TFB-10046 SS5]
Length = 787
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 67/135 (49%), Gaps = 22/135 (16%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
+VDVIC G PCQG S N R + N+Q++ + +V+ L+P++V +ENV I K
Sbjct: 383 NVDVICAGVPCQGHSRLNIHRGSKE--GEHNNQQMLTALSLVEVLRPRYVCIENVPAIDK 440
Query: 582 FA------------------KGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFL 623
+A GL R + L+ + YQVR+G++ AG YG PQ R R L
Sbjct: 441 WALKMRRETDDGIPIAADPHGGL--RLTITILLALGYQVRVGILQAGNYGTPQSRRRFIL 498
Query: 624 WGAQPTEKLPPYALP 638
A+ LP P
Sbjct: 499 LAAEFGSTLPDLPRP 513
>gi|347726864|gb|AEP19810.1| C5 cytosine DNA methyltransferase [Helicobacter pylori]
Length = 355
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 98/207 (47%), Gaps = 37/207 (17%)
Query: 512 FKSKILPLPG--DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPK 569
K K++ L +V++I GGPPCQG S + K+ L D +N + +++IV +KP+
Sbjct: 60 IKEKVIKLAQTLEVNMIIGGPPCQGFSN----KGKNLGLKDPRNFLFLEYIEIVKAIKPE 115
Query: 570 FVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPT 629
++ENV +I+ AKG RL + YQ+ ++ A YG+PQ R R F+ GA
Sbjct: 116 IFIIENVKNIISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQSRERAFIVGAS-- 173
Query: 630 EKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESR 689
F+ N + E ++ + +QDAISDL + + E
Sbjct: 174 -------------------RFSFDFNLL--------EPSQSVNVQDAISDLAYLCSNEGA 206
Query: 690 DEIPYDREPETEFQCFIRLRKDGKKLW 716
E Y ++ +Q +RKD KL+
Sbjct: 207 FESDYLNPIQSSYQAL--MRKDSPKLY 231
>gi|448542558|ref|ZP_21624720.1| DNA-cytosine methyltransferase [Haloferax sp. ATCC BAA-646]
gi|445707037|gb|ELZ58903.1| DNA-cytosine methyltransferase [Haloferax sp. ATCC BAA-646]
Length = 368
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 85/192 (44%), Gaps = 9/192 (4%)
Query: 520 PGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDI 579
P DVDVI GGPPCQG S R D + DE+N F++ V +P F +MENVV +
Sbjct: 21 PDDVDVIVGGPPCQGFSSIRPDRGDD--VEDERNGLYSDFIEYVSHYEPDFFIMENVVGL 78
Query: 580 VKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPT 639
G L + Y ++ +GLPQ R R+ + GA + + + PT
Sbjct: 79 ATHEDGDTISQILEDAKNIGYSADWRILNGANFGLPQRRERLIMIGAADEQDI-EFPEPT 137
Query: 640 HDVVLRGVI---PTEFERNTVAYDEGQQAE-LARKLLLQDAISDLPSVDNYESRDEIPYD 695
H R + T+ + AE L + DAI DLP ++ E + I Y
Sbjct: 138 HQANGRTIGYRDKTKVITTQPTLSNFRDAEALPEARTIMDAIGDLPKLEAGE--EAIEYT 195
Query: 696 REPETEFQCFIR 707
P+ +Q +R
Sbjct: 196 EPPQNRYQAALR 207
>gi|420396777|ref|ZP_14895995.1| cytosine-specific methyltransferase [Helicobacter pylori CPY1313]
gi|393012439|gb|EJB13617.1| cytosine-specific methyltransferase [Helicobacter pylori CPY1313]
Length = 361
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 100/207 (48%), Gaps = 37/207 (17%)
Query: 512 FKSKILPLPG--DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPK 569
K K++ L ++++I GGPPCQG S + K+ L D +N + +++IV LKP+
Sbjct: 60 IKEKVIKLAQTLEINMIIGGPPCQGFSN----KGKNLGLKDPRNFLFLEYIEIVKALKPE 115
Query: 570 FVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPT 629
++ENV +++ AKG RL + YQ+ ++ A YG+PQ R R F+ GA
Sbjct: 116 IFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGA--- 172
Query: 630 EKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESR 689
+H F+ N + E ++ + +QDAISDL + + E
Sbjct: 173 ---------SH---------FSFDFNLL--------EPSQSVNVQDAISDLAYLCSNEGA 206
Query: 690 DEIPYDREPETEFQCFIRLRKDGKKLW 716
E Y ++ +Q +RKD KL+
Sbjct: 207 FESDYLNPIQSSYQAL--MRKDSPKLY 231
>gi|427387312|ref|ZP_18883368.1| DNA (cytosine-5-)-methyltransferase [Bacteroides oleiciplenus YIT
12058]
gi|425725473|gb|EKU88344.1| DNA (cytosine-5-)-methyltransferase [Bacteroides oleiciplenus YIT
12058]
Length = 356
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 86/192 (44%), Gaps = 32/192 (16%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
++ ++ GGPPCQG S NR K + +E N F+ VD L P++ L ENV +V
Sbjct: 71 NIFILFGGPPCQGFSVSNR---KTRTVENENNGLFKEFLRFVDDLNPEWFLFENVEGLVN 127
Query: 582 FAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHD 641
F KG RY L + ++ Y+ ++ A YG+PQ R R F+ G
Sbjct: 128 FDKGKTLRYILNQFKKIGYKTSEAILYASDYGVPQHRNRFFIVG---------------- 171
Query: 642 VVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETE 701
RN + +D + + + + +AI+DLP ++N D +PY + E
Sbjct: 172 -----------NRNDIDFDFPPPND--KIITVGEAINDLPIIENGAHCDALPYRNDIELS 218
Query: 702 FQCFIRLRKDGK 713
+ RK K
Sbjct: 219 DYSLLMRRKSNK 230
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 10/100 (10%)
Query: 342 LDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLT 401
+D++SG G GL LGA AG+ + R+A++I+E + ++ NHP T++ + + T
Sbjct: 11 IDIFSGAG----GLSLGAEWAGITV--RYAIEIDENSAKTYSKNHPNTQIIRQDISNVET 64
Query: 402 LLREWEKLCISFSLIARKDPQQQLYSFNDDGESEEDDDNG 441
E + I F P Q N + E+++NG
Sbjct: 65 STFSHENIFILFG----GPPCQGFSVSNRKTRTVENENNG 100
>gi|428781246|ref|YP_007173032.1| DNA-methyltransferase Dcm [Dactylococcopsis salina PCC 8305]
gi|428695525|gb|AFZ51675.1| DNA-methyltransferase Dcm [Dactylococcopsis salina PCC 8305]
Length = 433
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 82/167 (49%), Gaps = 20/167 (11%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
D+DV+CGGPPCQG S + L DE+N + F+ +V LKPK+ +MENV +
Sbjct: 79 DIDVVCGGPPCQGFSLIGK-----RVLDDERNSLVFHFLRLVLELKPKYFVMENVAGMGI 133
Query: 582 FAKGLLGRYALARLIQMNYQVRM--GMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPT 639
L + + + YQV++ ++ A +G+PQ R R+FL G + + LP Y P
Sbjct: 134 GKSQQLLEELIKKFQENGYQVQLPYQVLNASNFGVPQNRKRLFLLGCRQDQTLPNYPKPM 193
Query: 640 HDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNY 686
P E + + L ++DAI DLP ++NY
Sbjct: 194 TK-------PPEAKVMLL------NCYLPNSPTVEDAIIDLPEIENY 227
>gi|153868905|ref|ZP_01998633.1| C-5 cytosine-specific DNA methylase [Beggiatoa sp. PS]
gi|152074513|gb|EDN71359.1| C-5 cytosine-specific DNA methylase [Beggiatoa sp. PS]
Length = 418
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 99/201 (49%), Gaps = 32/201 (15%)
Query: 521 GDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIV 580
G++D++ GGPPCQG S R+ D D++N ++ + L PK +L+ENV I+
Sbjct: 99 GEIDLLAGGPPCQGFSINAPIRSLD----DDRNYLFREYISVAQELLPKAILIENVPGII 154
Query: 581 KFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMR-VFLWGAQPTEKLPPYALPT 639
KG + + L Q+ Y+V ++ AG YG+PQ R R +FL A+
Sbjct: 155 SLGKGTVVEKIYSELEQLGYKVNHRILFAGHYGVPQMRFRTIFL------------AIHL 202
Query: 640 HDVVLRGVIPTEFERNTVAYDEGQQAELARKLL------------LQDAISDLPSVDNYE 687
DV ++ P + VA G + EL +L + DAISD+P +++ E
Sbjct: 203 PDVEIKFPEPL-YNAKAVANFTGAK-ELCLDVLPLFSQSLKPQTSVWDAISDMPKIESGE 260
Query: 688 SRDEIPYDRE-PETEFQCFIR 707
++I Y P++E+Q +R
Sbjct: 261 KNEKIKYGSPYPKSEYQKILR 281
>gi|448549957|ref|ZP_21628562.1| DNA-cytosine methyltransferase [Haloferax sp. ATCC BAA-645]
gi|445713005|gb|ELZ64786.1| DNA-cytosine methyltransferase [Haloferax sp. ATCC BAA-645]
Length = 416
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 85/192 (44%), Gaps = 9/192 (4%)
Query: 520 PGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDI 579
P DVDVI GGPPCQG S R D + DE+N F++ V +P F +MENVV +
Sbjct: 69 PDDVDVIVGGPPCQGFSSIRPDRGDD--VEDERNGLYSDFIEYVSHYEPDFFIMENVVGL 126
Query: 580 VKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPT 639
G L + Y ++ +GLPQ R R+ + GA + + + PT
Sbjct: 127 ATHEDGDTISQILEDAKNIGYSADWRILNGANFGLPQRRERLIMIGAADEQDI-EFPEPT 185
Query: 640 HDVVLRGVI---PTEFERNTVAYDEGQQAE-LARKLLLQDAISDLPSVDNYESRDEIPYD 695
H R + T+ + AE L + DAI DLP ++ E + I Y
Sbjct: 186 HQANGRTIGYRDKTKVITTQPTLSNFRDAEALPEARTIMDAIGDLPKLEAGE--EAIEYT 243
Query: 696 REPETEFQCFIR 707
P+ +Q +R
Sbjct: 244 EPPQNRYQAALR 255
>gi|161621504|gb|ABX75256.1| cytosine-5-methyltransferase [Malus x domestica]
Length = 148
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LPLP VD I GGPPCQG SG NRF + + + + ++ + D+ +PK+ L+ENV
Sbjct: 65 LPLPWQVDFINGGPPCQGFSGMNRF--NQSTWSKVQCEMILASLSFADYFRPKYFLLENV 122
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQV 602
++V F +G R LA L++M YQV
Sbjct: 123 RNLVSFNEGQTFRLTLASLLEMGYQV 148
>gi|420420796|ref|ZP_14919880.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4161]
gi|393035595|gb|EJB36639.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4161]
Length = 355
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 98/207 (47%), Gaps = 37/207 (17%)
Query: 512 FKSKILPLPG--DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPK 569
K K++ L ++++I GGPPCQG S + K+ L D +N + +++IV +KP+
Sbjct: 60 IKEKVIKLAQTLEINMIIGGPPCQGFSN----KGKNLGLKDPRNFLFLEYIEIVKAIKPE 115
Query: 570 FVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPT 629
++ENV +I+ AKG RL + YQ+ ++ A YG+PQ R R F+ GA
Sbjct: 116 IFIIENVKNIISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGAS-- 173
Query: 630 EKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESR 689
F+ N + E ++ + +QDAISDL + + E
Sbjct: 174 -------------------RFSFDFNLL--------EPSQSVNIQDAISDLAYLCSNEGA 206
Query: 690 DEIPYDREPETEFQCFIRLRKDGKKLW 716
E Y ++ +Q +RKD KL+
Sbjct: 207 FESDYLNPIQSSYQAL--MRKDSPKLY 231
>gi|420412917|ref|ZP_14912042.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4099]
gi|393030678|gb|EJB31756.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4099]
Length = 355
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 98/206 (47%), Gaps = 37/206 (17%)
Query: 513 KSKILPLPG--DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKF 570
K K++ L ++++I GGPPCQG S + K+ L D +N + +++IV +KP+
Sbjct: 61 KEKVIKLAQTLEINMIIGGPPCQGFSN----KGKNLGLKDPRNFLFLEYIEIVKAIKPEI 116
Query: 571 VLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTE 630
++ENV +I+ AKG RL + YQ+ ++ A YG+PQ R R F+ GA
Sbjct: 117 FIIENVKNIISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGAS--- 173
Query: 631 KLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRD 690
F+ N + E ++ + +QDAISDL + + E
Sbjct: 174 ------------------RFSFDFNLL--------EPSQSVNIQDAISDLAYLCSNEGAF 207
Query: 691 EIPYDREPETEFQCFIRLRKDGKKLW 716
E Y ++ +Q +RKD KL+
Sbjct: 208 ESDYLNPIQSSYQAL--MRKDSPKLY 231
>gi|325678040|ref|ZP_08157677.1| putative modification methylase BspRI [Ruminococcus albus 8]
gi|324110257|gb|EGC04436.1| putative modification methylase BspRI [Ruminococcus albus 8]
Length = 358
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 94/200 (47%), Gaps = 38/200 (19%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
+VDVI GGPPCQG S + R D+P +N F+ +V ++PK +MENV +VK
Sbjct: 70 EVDVIIGGPPCQGFSLSGK-RMIDDP----RNILYKSFVRMVSDIQPKIFVMENVPGLVK 124
Query: 582 FAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGA-----QPTEKLPPYA 636
KG + + + Y+V +G + A YG+PQ R RVF G + TEK
Sbjct: 125 LFKGKVKDQVIEDFSNLGYEVTLGQLTACDYGVPQARKRVFFVGVNKSKIKHTEKF---- 180
Query: 637 LPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSV-DNYESRDEIPYD 695
V PT + +AY + +DAISDL + D ++ Y
Sbjct: 181 ----------VFPTPTHGDKIAY-----------VTCKDAISDLDFIGDTTLLQEHDAYQ 219
Query: 696 REPETEFQCFIRLRKDGKKL 715
+ E+Q + +RK+ K+L
Sbjct: 220 ISAQNEYQ--VMMRKNAKEL 237
>gi|420419205|ref|ZP_14918295.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4076]
gi|393031111|gb|EJB32183.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4076]
Length = 355
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 98/207 (47%), Gaps = 37/207 (17%)
Query: 512 FKSKILPLPG--DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPK 569
K K++ L ++++I GGPPCQG S + K+ L D +N + +++IV +KP+
Sbjct: 60 IKEKVIKLAQTLEINMIIGGPPCQGFSN----KGKNLGLKDPRNFLFLEYIEIVKAIKPE 115
Query: 570 FVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPT 629
++ENV +I+ AKG RL + YQ+ ++ A YG+PQ R R F+ GA
Sbjct: 116 IFIIENVKNIISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGAS-- 173
Query: 630 EKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESR 689
F+ N + E ++ + +QDAISDL + + E
Sbjct: 174 -------------------RFSFDFNLL--------EPSQSVNIQDAISDLAYLCSNEGA 206
Query: 690 DEIPYDREPETEFQCFIRLRKDGKKLW 716
E Y ++ +Q +RKD KL+
Sbjct: 207 FESDYLNPIQSSYQAL--MRKDSPKLY 231
>gi|384254282|gb|EIE27756.1| S-adenosyl-L-methionine-dependent methyltransferase [Coccomyxa
subellipsoidea C-169]
Length = 788
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 98/214 (45%), Gaps = 27/214 (12%)
Query: 520 PGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIV--FMDIVDFLKPKFVLMENVV 577
PG+V + PPCQG++ N RN ++ A + L+ + V+ L+P F +E V
Sbjct: 332 PGEVGCMHASPPCQGITVLNNRRNSESLSAPDGLFPLLAEYLVKTVELLQPAFFTLEEVP 391
Query: 578 DIVKF-AKGLLGRYALAR--------LIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQP 628
+ AK G + +AR L+ + YQ+ + +M A YG PQ R+RV L+ A+P
Sbjct: 392 SFLAISAKSTDGGWEIARCVWAIVLPLLDLGYQLDVRVMNAANYGTPQSRLRVILFAAKP 451
Query: 629 TEKL--PPYALPTHDVVLRGVIPTEFE------------RNTVAYDEGQQAELARKLLLQ 674
+L PP H +G +P+ E R+ + Q +L L +
Sbjct: 452 GYRLCHPPKPWNHHTWTYKG-LPSLGEDAALLNCQDNRWRHIALTSDDQAEKLPPALSAK 510
Query: 675 DAISDLPSVDNYESRDEI-PYDREPETEFQCFIR 707
DAI DLP+ S+D + Y +F F+R
Sbjct: 511 DAIDDLPADVTAGSKDRVMAYPSGSAGDFARFLR 544
>gi|384899614|ref|YP_005774994.1| cytosine specific DNA methyltransferase [Helicobacter pylori F30]
gi|317179558|dbj|BAJ57346.1| cytosine specific DNA methyltransferase [Helicobacter pylori F30]
Length = 355
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 98/207 (47%), Gaps = 37/207 (17%)
Query: 512 FKSKILPLPG--DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPK 569
K K++ L ++++I GGPPCQG S + K+ L D +N + +++IV LKP+
Sbjct: 60 IKEKVIKLAQTLEINMIIGGPPCQGFSN----KGKNLGLKDPRNFLFLEYIEIVKALKPE 115
Query: 570 FVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPT 629
++ENV +++ AKG RL + YQ+ ++ A YG+PQ R R F+ GA
Sbjct: 116 IFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGAS-- 173
Query: 630 EKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESR 689
F+ N + E ++ + +QDAISDL + + E
Sbjct: 174 -------------------RFSFDFNLL--------EPSQSVNIQDAISDLAYLCSNEGA 206
Query: 690 DEIPYDREPETEFQCFIRLRKDGKKLW 716
E Y ++ +Q +RKD KL+
Sbjct: 207 FESDYLNPIQSSYQAL--MRKDSPKLY 231
>gi|317127845|ref|YP_004094127.1| DNA-cytosine methyltransferase [Bacillus cellulosilyticus DSM 2522]
gi|315472793|gb|ADU29396.1| DNA-cytosine methyltransferase [Bacillus cellulosilyticus DSM 2522]
Length = 363
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 89/191 (46%), Gaps = 37/191 (19%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
++ I GGPPCQG F+ +D + DE+N + + +V + PKF ++ENV ++
Sbjct: 72 IEGIIGGPPCQG---FSTVGTRD--INDERNHLYLEYFRVVKEVMPKFFVIENVKGLLTL 126
Query: 583 AKGLLGRYALARLIQMNYQVRM-GMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHD 641
KG+ + R + Y++ ++ A YG+PQ R RVF G
Sbjct: 127 NKGMFKEDIMDRFGNLGYRISEPQVLNAADYGVPQHRHRVFFVG---------------- 170
Query: 642 VVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRD-EIPYDREPET 700
VL G ++N V + +DA+SDLPS++ +E D E Y +P+
Sbjct: 171 -VLDGAFEFPRKKNEV-------------ISTKDALSDLPSLEKFEGSDVEFEYHVKPQN 216
Query: 701 EFQCFIRLRKD 711
+Q F+R D
Sbjct: 217 LYQTFMRENSD 227
>gi|172038906|ref|YP_001805407.1| C-5 cytosine-specific DNA methylase [Cyanothece sp. ATCC 51142]
gi|354552802|ref|ZP_08972110.1| DNA-cytosine methyltransferase [Cyanothece sp. ATCC 51472]
gi|171700360|gb|ACB53341.1| C-5 cytosine-specific DNA methylase [Cyanothece sp. ATCC 51142]
gi|353556124|gb|EHC25512.1| DNA-cytosine methyltransferase [Cyanothece sp. ATCC 51472]
Length = 427
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 81/166 (48%), Gaps = 24/166 (14%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+DV+ GGPPCQG S + L D++N + F+ +V L+PK+ +MENV +
Sbjct: 76 IDVVFGGPPCQGFSLMGK-----RCLEDDRNSLVKHFLRLVVELQPKYFVMENVRGMAIG 130
Query: 583 AKGLLGRYALARLIQMNYQVRM--GMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTH 640
+L ++ NY+V+ + A YG+PQ R R+FL GA+ KLP Y
Sbjct: 131 KHQILLEEIFDEFVKNNYRVQTEYKFLNAANYGVPQLRERLFLLGAKQGLKLPNYP---- 186
Query: 641 DVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNY 686
D V + Y++ L ++DAI DLP V++Y
Sbjct: 187 DFVTK-------------YNQQDNLSLPLTPTVKDAIQDLPEVNHY 219
>gi|294667855|ref|ZP_06733064.1| DNA cytosine-5 -methyltransferase PliMCI [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 10535]
gi|292602358|gb|EFF45800.1| DNA cytosine-5 -methyltransferase PliMCI [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 10535]
Length = 410
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 94/197 (47%), Gaps = 13/197 (6%)
Query: 521 GDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIV 580
G++D+I GGPPCQG S R+ + D +N ++ V +P+ VL+ENV +V
Sbjct: 79 GELDLIAGGPPCQGFSINAPKRSTE----DSRNHLFREYLRFVTEFQPQAVLIENVPGMV 134
Query: 581 KFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQ----PTEKLPPYA 636
F G LA L Q+ Y + ++ A YG+PQ R R + G++ PT P
Sbjct: 135 SFEGGATLDAILAALKQLGYDADVRILYAPHYGVPQTRWRTIILGSRCGVDPTALFPE-- 192
Query: 637 LPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDR 696
P +R ++F + + + EL + ++DAI DLP + N E + + R
Sbjct: 193 -PLRQAPVRVNFTSQFAGKNLV-NLPRSLELPSHVTVKDAIGDLPKLRNGEMGEPVKDYR 250
Query: 697 EP-ETEFQCFIRLRKDG 712
P + +Q +R+ G
Sbjct: 251 HPADNPYQQLMRVGSTG 267
>gi|79835453|gb|ABB52085.1| Mod [Arthrospira platensis]
gi|291569776|dbj|BAI92048.1| type II DNA modification methyltransferase [Arthrospira platensis
NIES-39]
Length = 429
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 98/198 (49%), Gaps = 23/198 (11%)
Query: 515 KILPLPGDV--DVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVL 572
+IL G++ +I GG PCQG S N+ NK + D +N + I L+P+ ++
Sbjct: 98 QILDTFGEIKPHIILGGIPCQGFSICNQ--NKGD-RQDSRNYMFQDLIRISSLLQPEIII 154
Query: 573 MENVVDIVKFA---KGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPT 629
+ENV +++K + L+ +++L + YQV ++ A YG+PQ R R+F+ A
Sbjct: 155 IENVPNLIKAKTTNRQLVIDLIMSKLRHLGYQVNYQILNATDYGIPQVRKRLFIL-AHRC 213
Query: 630 EKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESR 689
+ P+ PTH T E L + L +AISDLP +D E
Sbjct: 214 DLTHPFPQPTH--------------TTSNQTELFTHNLKKCPSLWEAISDLPDIDAGEGA 259
Query: 690 DEIPYDREPETEFQCFIR 707
+E+ Y++ P+ E+Q +R
Sbjct: 260 EEMEYNKCPDHEYQQILR 277
>gi|387907427|ref|YP_006337761.1| cytosine specific DNA methyltransferase (DDEM) [Helicobacter pylori
XZ274]
gi|387572362|gb|AFJ81070.1| cytosine specific DNA methyltransferase (DDEM) [Helicobacter pylori
XZ274]
Length = 355
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 92/194 (47%), Gaps = 35/194 (18%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+++I GGPPCQG S + K+ L D +N + +++IV LKP+ ++ENV +++
Sbjct: 73 INMIIGGPPCQGFSN----KGKNLGLKDPRNFLFLEYIEIVKALKPEIFIIENVKNLISC 128
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
AKG RL + YQV ++ A YG+PQ R R F+ GA
Sbjct: 129 AKGYFLEEIKERLNALGYQVSYQILNAKDYGVPQNRERAFVVGAS--------------- 173
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
F+ N + E ++ + +QDAISDL + + E E Y ++ +
Sbjct: 174 ------RFSFDFNLL--------EPSQSVNVQDAISDLAYLCSNEGAFESDYLNPIQSSY 219
Query: 703 QCFIRLRKDGKKLW 716
Q +RKD KL+
Sbjct: 220 QAL--MRKDSPKLY 231
>gi|385221554|ref|YP_005770687.1| cytosine specific DNA methyltransferase [Helicobacter pylori
SouthAfrica7]
gi|317010333|gb|ADU84080.1| cytosine specific DNA methyltransferase [Helicobacter pylori
SouthAfrica7]
Length = 361
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 37/208 (17%)
Query: 511 GFKSKILPLPG--DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKP 568
G K K++ L ++++I GGPPCQG S + K+ L D +N + +++IV +KP
Sbjct: 59 GIKEKVIELAKKLEINMIIGGPPCQGFSN----KGKNLGLKDPRNFLFLEYIEIVKAIKP 114
Query: 569 KFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQP 628
+ ++ENV +++ AKG RL + YQ+ ++ A YG+PQ R R F+ GA
Sbjct: 115 EIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQSRERAFIVGA-- 172
Query: 629 TEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYES 688
TH F+ + + E ++ + +Q+AISDL + + E
Sbjct: 173 ----------TH---------FSFDFDLL--------EPSQSVSVQEAISDLAYLHSNEG 205
Query: 689 RDEIPYDREPETEFQCFIRLRKDGKKLW 716
E Y ++ +Q +RK+ KL+
Sbjct: 206 AFESDYLNPIQSNYQAL--MRKNSPKLY 231
>gi|440682378|ref|YP_007157173.1| DNA-cytosine methyltransferase [Anabaena cylindrica PCC 7122]
gi|428679497|gb|AFZ58263.1| DNA-cytosine methyltransferase [Anabaena cylindrica PCC 7122]
Length = 412
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 101/205 (49%), Gaps = 35/205 (17%)
Query: 524 DVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFA 583
D+I GGPPCQG F+ + D +N I F + FL+PK +MENV
Sbjct: 75 DIIIGGPPCQG---FSIAGPAEKDPHDPRNTLFINFAKWISFLEPKAFVMENV------- 124
Query: 584 KGLLGR-----YALARLI-----QMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLP 633
KGLL R + +I ++ Y V + ++ + YG+PQ R RVF+ G + +KL
Sbjct: 125 KGLLSRKNAEGVKVIDIIKKTFEELGYFVEVWLLNSAEYGVPQIRERVFIVGNKLGQKL- 183
Query: 634 PYALP--THDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDE 691
+P TH + L + + ++++E L + L DAISDLP + E ++E
Sbjct: 184 --GIPKKTHSLNLLNINSYQ-----LSFEE---INLIPAINLWDAISDLPPLKAREGKEE 233
Query: 692 IPYDREPETEFQCFIRLRKDGKKLW 716
Y E + +Q +IR R GK L+
Sbjct: 234 QSYILESQNHYQNWIRNR--GKILY 256
>gi|422855124|ref|ZP_16901782.1| modification methylase DdeI [Streptococcus sanguinis SK1]
gi|327463101|gb|EGF09422.1| modification methylase DdeI [Streptococcus sanguinis SK1]
Length = 351
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 94/198 (47%), Gaps = 37/198 (18%)
Query: 512 FKSKILPLPGD--VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPK 569
++ I P+ G+ VD+I GGPPCQG+S + R D+P +NK + ++ +V ++P
Sbjct: 60 YEEDIKPIIGEQKVDLIVGGPPCQGMS-LSGPRKFDDP----RNKLYLSYIRLVREIQPT 114
Query: 570 FVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPT 629
++ENV+ IV KG + + +M Y+V+ ++ A YG+PQ R RV G +
Sbjct: 115 AFVIENVIGIVSLFKGHIKDAIIEEFSKMGYKVQFKVLLASDYGVPQNRKRVIFVGTKND 174
Query: 630 EKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESR 689
P +L T I TE A+SDLP+++N
Sbjct: 175 GFEYPTSLGT-------TITTEM-----------------------ALSDLPTLENELGD 204
Query: 690 DEIPYDREPETEFQCFIR 707
E+ Y EP+ +Q +R
Sbjct: 205 AEMVYVSEPKNNYQKLMR 222
>gi|387781756|ref|YP_005792469.1| cytosine-methyltransferase [Helicobacter pylori 51]
gi|261837515|gb|ACX97281.1| cytosine-methyltransferase [Helicobacter pylori 51]
Length = 355
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 98/207 (47%), Gaps = 37/207 (17%)
Query: 512 FKSKILPLPG--DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPK 569
K K++ L ++++I GGPPCQG S + K+ L D +N + +++IV LKP+
Sbjct: 60 IKEKVIKLAQTLEINMIIGGPPCQGFSN----KGKNLGLKDPRNFLFLEYIEIVKALKPE 115
Query: 570 FVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPT 629
++ENV +++ AKG RL + YQ+ ++ A YG+PQ R R F+ GA
Sbjct: 116 IFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGAS-- 173
Query: 630 EKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESR 689
F+ N + E ++ + +QDAISDL + + E
Sbjct: 174 -------------------RFSFDFNLL--------EPSQSVNVQDAISDLAYLCSNEGA 206
Query: 690 DEIPYDREPETEFQCFIRLRKDGKKLW 716
E Y ++ +Q +RKD KL+
Sbjct: 207 FESDYLNPIQSSYQAL--MRKDSPKLY 231
>gi|425791505|ref|YP_007019422.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Aklavik86]
gi|425629820|gb|AFX90360.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Aklavik86]
Length = 355
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 98/207 (47%), Gaps = 37/207 (17%)
Query: 512 FKSKILPLPG--DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPK 569
K K++ L ++++I GGPPCQG S + K+ L D +N + +++IV LKP+
Sbjct: 60 IKEKVIKLAQTLEINMIIGGPPCQGFSN----KGKNLGLKDPRNFLFLEYIEIVKALKPE 115
Query: 570 FVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPT 629
++ENV +++ AKG RL + YQ+ ++ A YG+PQ R R F+ GA
Sbjct: 116 IFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGAS-- 173
Query: 630 EKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESR 689
F+ N + E ++ + +QDAISDL + + E
Sbjct: 174 -------------------RFSFDFNLL--------EPSQSVNVQDAISDLAYLCSNEGA 206
Query: 690 DEIPYDREPETEFQCFIRLRKDGKKLW 716
E Y ++ +Q +RKD KL+
Sbjct: 207 FESDYLNPIQSSYQAL--MRKDSPKLY 231
>gi|425788683|ref|YP_007016603.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Aklavik117]
gi|425626998|gb|AFX90466.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Aklavik117]
Length = 355
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 98/207 (47%), Gaps = 37/207 (17%)
Query: 512 FKSKILPLPG--DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPK 569
K K++ L ++++I GGPPCQG S + K+ L D +N + +++IV LKP+
Sbjct: 60 IKEKVIKLAQTLEINMIIGGPPCQGFSN----KGKNLGLKDPRNFLFLEYIEIVKALKPE 115
Query: 570 FVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPT 629
++ENV +++ AKG RL + YQ+ ++ A YG+PQ R R F+ GA
Sbjct: 116 IFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGAS-- 173
Query: 630 EKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESR 689
F+ N + E ++ + +QDAISDL + + E
Sbjct: 174 -------------------RFSFDFNLL--------EPSQSVNVQDAISDLAYLCSNEGA 206
Query: 690 DEIPYDREPETEFQCFIRLRKDGKKLW 716
E Y ++ +Q +RKD KL+
Sbjct: 207 FESDYLNPIQSSYQAL--MRKDSPKLY 231
>gi|419418017|ref|ZP_13958382.1| cytosine specific DNA methyltransferase [Helicobacter pylori NCTC
11637 = CCUG 17874]
gi|384374926|gb|EIE30275.1| cytosine specific DNA methyltransferase [Helicobacter pylori NCTC
11637 = CCUG 17874]
Length = 355
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 98/207 (47%), Gaps = 37/207 (17%)
Query: 512 FKSKILPLPG--DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPK 569
K K++ L ++++I GGPPCQG S + K+ L D +N + +++IV LKP+
Sbjct: 60 IKEKVIKLAQTLEINMIIGGPPCQGFSN----KGKNLGLKDPRNFLFLEYIEIVKALKPE 115
Query: 570 FVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPT 629
++ENV +++ AKG RL + YQ+ ++ A YG+PQ R R F+ GA
Sbjct: 116 IFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGAS-- 173
Query: 630 EKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESR 689
F+ N + E ++ + +QDAISDL + + E
Sbjct: 174 -------------------RFSFDFNLL--------EPSQSVNVQDAISDLAYLCSNEGA 206
Query: 690 DEIPYDREPETEFQCFIRLRKDGKKLW 716
E Y ++ +Q +RKD KL+
Sbjct: 207 FESDYLNPIQSSYQAL--MRKDSPKLY 231
>gi|420490054|ref|ZP_14988640.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-13]
gi|420523894|ref|ZP_15022304.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-13b]
gi|393109397|gb|EJC09928.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-13]
gi|393133053|gb|EJC33470.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-13b]
Length = 361
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 105/223 (47%), Gaps = 41/223 (18%)
Query: 496 GLSNCGEKIKEFVTHGFKSKILPLPG--DVDVICGGPPCQGVSGFNRFRNKDNPLADEKN 553
+S CG+ + + K K++ L ++++I GGPPCQG S + K+ L D +N
Sbjct: 48 AISVCGDITQTEI----KEKVIELAKKLEINMIIGGPPCQGFSN----KGKNLGLKDPRN 99
Query: 554 KQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYG 613
+ +++IV +KP+ ++ENV +++ AKG RL + YQ+ ++ A YG
Sbjct: 100 FLFLEYIEIVKAIKPEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYG 159
Query: 614 LPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLL 673
+PQ R R F+ GA F+ N + E ++ + +
Sbjct: 160 VPQNRERAFIVGAS---------------------RFSFDFNLL--------EPSQSVNI 190
Query: 674 QDAISDLPSVDNYESRDEIPYDREPETEFQCFIRLRKDGKKLW 716
QDAISDL + + E E Y ++ +Q +RKD KL+
Sbjct: 191 QDAISDLAYLCSNEGAFESDYLNPIQSSYQAL--MRKDSPKLY 231
>gi|409991231|ref|ZP_11274511.1| site-specific DNA-methyltransferase [Arthrospira platensis str.
Paraca]
gi|409937907|gb|EKN79291.1| site-specific DNA-methyltransferase [Arthrospira platensis str.
Paraca]
Length = 388
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 98/198 (49%), Gaps = 23/198 (11%)
Query: 515 KILPLPGDV--DVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVL 572
+IL G++ +I GG PCQG S N+ NK + D +N + I L+P+ ++
Sbjct: 57 QILDTFGEIKPHIILGGIPCQGFSICNQ--NKGD-RQDSRNYMFQDLIRISSLLQPEIII 113
Query: 573 MENVVDIVKFA---KGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPT 629
+ENV +++K + L+ +++L + YQV ++ A YG+PQ R R+F+ A
Sbjct: 114 IENVPNLIKAKTTNRQLVIDLIMSKLRHLGYQVNYQILNATDYGIPQVRKRLFIL-AHRC 172
Query: 630 EKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESR 689
+ P+ PTH T E L + L +AISDLP +D E
Sbjct: 173 DLTHPFPQPTH--------------TTSNQTELFTHNLKKCPSLWEAISDLPDIDAGEGA 218
Query: 690 DEIPYDREPETEFQCFIR 707
+E+ Y++ P+ E+Q +R
Sbjct: 219 EEMEYNKCPDHEYQQILR 236
>gi|17225517|gb|AAL37447.1|AF328915_1 cytosine-specific DNA methyltransferase [Helicobacter pylori]
Length = 361
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 98/207 (47%), Gaps = 37/207 (17%)
Query: 512 FKSKILPLPG--DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPK 569
K K++ L ++++I GGPPCQG S + K+ L D +N + +++IV +KP+
Sbjct: 60 IKEKVIKLAQTLEINMIIGGPPCQGFSN----KGKNLGLKDPRNFLFLEYIEIVKAIKPE 115
Query: 570 FVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPT 629
++ENV +++ AKG RL + YQ+ ++ A YG+PQ R R F+ GA
Sbjct: 116 IFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGAS-- 173
Query: 630 EKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESR 689
F+ N + E ++ + +QDAISDL + + E
Sbjct: 174 -------------------RFSFDFNLL--------EPSQSVNIQDAISDLAYLCSNEGA 206
Query: 690 DEIPYDREPETEFQCFIRLRKDGKKLW 716
E Y ++ +Q +RKD KL+
Sbjct: 207 FESDYLNPIQSSYQAL--MRKDSPKLY 231
>gi|443313327|ref|ZP_21042939.1| DNA-methyltransferase Dcm [Synechocystis sp. PCC 7509]
gi|442776732|gb|ELR87013.1| DNA-methyltransferase Dcm [Synechocystis sp. PCC 7509]
Length = 413
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 96/194 (49%), Gaps = 28/194 (14%)
Query: 524 DVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFA 583
D+I GGPPCQG F+ + D +N + F ++ L+PK +MENV
Sbjct: 75 DIIIGGPPCQG---FSIAGSAQKDPKDPRNSLFLNFAQWINCLRPKAFIMENV------- 124
Query: 584 KGLLGRY-----ALARLI-----QMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLP 633
KGLL R + +I ++ Y V + ++ + YG+PQ R RVF+ G + L
Sbjct: 125 KGLLSRKNTEGEKVINIIKKTFEEIGYFVEIWLLNSAEYGVPQIRERVFIVGNTLGKTLG 184
Query: 634 PYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIP 693
L TH + L + +F+ +++ + L L L DAISDLPS++ E ++E
Sbjct: 185 T-PLKTHSLNLSNM--KDFQLSSL-----ENTGLFPSLSLWDAISDLPSLNAREGKEEQS 236
Query: 694 YDREPETEFQCFIR 707
Y P+ +Q +IR
Sbjct: 237 YISLPQNIYQNWIR 250
>gi|225862882|ref|YP_002748260.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus 03BB102]
gi|225789623|gb|ACO29840.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus 03BB102]
Length = 360
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 60/112 (53%), Gaps = 3/112 (2%)
Query: 516 ILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMEN 575
+ L GD+DVI GGPPCQG S NR++ + + D +NK ++ V+ LKPK VL+EN
Sbjct: 65 MFDLLGDIDVIVGGPPCQGFSSANRWQKE---IEDPRNKLFYEYIRFVEVLKPKVVLIEN 121
Query: 576 VVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQ 627
V I+ G L + Y V ++ A YG+PQ R+R F +
Sbjct: 122 VRGILTRDNGYAKNKIYEILQRSGYNVDSAVLDASEYGVPQKRLRAFFLATR 173
>gi|420500502|ref|ZP_14999048.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-30]
gi|393152269|gb|EJC52570.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-30]
Length = 355
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 97/208 (46%), Gaps = 37/208 (17%)
Query: 511 GFKSKILPLPG--DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKP 568
K K++ L ++++I GGPPCQG S + K+ L D +N + +++IV +KP
Sbjct: 59 AIKEKVIKLAQKLEINMIIGGPPCQGFSN----KGKNLGLKDPRNFLFLEYIEIVGAIKP 114
Query: 569 KFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQP 628
+ ++ENV +++ AKG RL + YQV + A YG+PQ R R F+ GA
Sbjct: 115 EIFIIENVKNLISCAKGYFLEEIKERLNALGYQVSYQTLNAKDYGVPQNRERAFIVGAS- 173
Query: 629 TEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYES 688
F+ N + E ++ + +QDAISDL + + E
Sbjct: 174 --------------------RFSFDFNLL--------EPSQSVNVQDAISDLAYLCSNEG 205
Query: 689 RDEIPYDREPETEFQCFIRLRKDGKKLW 716
E Y ++ +Q +RKD KL+
Sbjct: 206 TFESDYLNPVQSNYQAL--MRKDSPKLY 231
>gi|430894893|ref|ZP_19484642.1| Alw26I/Eco31I/Esp3I family type II restriction m6 adenine DNA
methyltransferase [Enterococcus faecium E1575]
gi|430555189|gb|ELA94738.1| Alw26I/Eco31I/Esp3I family type II restriction m6 adenine DNA
methyltransferase [Enterococcus faecium E1575]
Length = 940
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 70/133 (52%), Gaps = 8/133 (6%)
Query: 508 VTHGFKSKIL---PLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVD 564
VT+ + +I+ + +VD+ICGGPPCQG S FR D+P +NK ++ F DI+
Sbjct: 748 VTNEYTKEIIIDTAIQNNVDIICGGPPCQGFS-LAGFRKSDDP----RNKLVLDFADIIK 802
Query: 565 FLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLW 624
++PK + ENVV ++ + KG + + Y++ + YG+PQ R RV +
Sbjct: 803 NVEPKVFVFENVVGLLSYNKGETFNEIKKMFLALGYKLHAETLDFSDYGVPQRRRRVIII 862
Query: 625 GAQPTEKLPPYAL 637
G + + P L
Sbjct: 863 GVRNNINIEPSKL 875
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 31/52 (59%), Gaps = 6/52 (11%)
Query: 340 KLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEV 391
K LDL+SG G GL G +AG+ V A DI+ AC +LK+N+PE V
Sbjct: 698 KSLDLFSGAG----GLLYGFKMAGVEHV--LANDIDRSACVTLKINNPEVNV 743
>gi|367047877|ref|XP_003654318.1| hypothetical protein THITE_2155132 [Thielavia terrestris NRRL 8126]
gi|347001581|gb|AEO67982.1| hypothetical protein THITE_2155132 [Thielavia terrestris NRRL 8126]
Length = 2062
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 71/129 (55%), Gaps = 9/129 (6%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIV-FMDIVDFLKPKFVLMEN 575
+P PG+VD I G PC G S + K L KN+ L+ F VDF +PK+ ++EN
Sbjct: 1511 VPRPGEVDFISAGSPCPGFSLLTPDKTK---LVQIKNQSLVASFASFVDFYRPKYGILEN 1567
Query: 576 VVDIVKF----AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEK 631
V+ IV+ ++ +L + A ++ + YQ ++ + A +YG PQ R RVF + A P +
Sbjct: 1568 VITIVQARHNRSEDVLSQLFCA-IVGLGYQAQLILGDAWSYGAPQGRSRVFFYFAAPGLR 1626
Query: 632 LPPYALPTH 640
LP P+H
Sbjct: 1627 LPESPTPSH 1635
>gi|325679553|ref|ZP_08159133.1| DNA (cytosine-5-)-methyltransferase [Ruminococcus albus 8]
gi|324108840|gb|EGC03076.1| DNA (cytosine-5-)-methyltransferase [Ruminococcus albus 8]
Length = 708
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 100/217 (46%), Gaps = 43/217 (19%)
Query: 508 VTHG------FKSKILPLPGD--VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVF 559
+ HG K +I+ L + V+++ GGPPCQG S + K L D +N + +
Sbjct: 396 IVHGDITDSAVKERIISLSKEKKVNMVIGGPPCQGFS----LKGKKLGLNDPRNFLFLEY 451
Query: 560 MDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRM 619
++IV + P+ ++ENV ++ + G + R+ +M Y VR G++ + YG+PQ R
Sbjct: 452 LNIVSEINPQVFIIENVKALLSTSAGWFKDQIVQRVEEMGYTVRYGVLNSADYGVPQLRQ 511
Query: 620 RVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISD 679
R ++ P LP PT + TV +DAI D
Sbjct: 512 RAIFICSKDI----PIELPK---------PTAKKVTTV----------------RDAIFD 542
Query: 680 LPSVDNYESRDEIPYDREPETEFQCFIRLRKDGKKLW 716
L +++ E E Y +P +++Q ++RK KKL+
Sbjct: 543 LAYLNSGEGAFEQDYTTQPSSDYQT--KMRKGAKKLY 577
>gi|395333804|gb|EJF66181.1| S-adenosyl-L-methionine-dependent methyltransferase [Dichomitus
squalens LYAD-421 SS1]
Length = 1200
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 81/189 (42%), Gaps = 27/189 (14%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
+P G+VD I GGPPCQ S N + D+P ++ + V+F +P + L+ENV
Sbjct: 786 MPQRGEVDFIYGGPPCQSFSQINHNKKIDDP----RSTLACNMISYVEFYRPMYFLLENV 841
Query: 577 VDIVK---------------FAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRV 621
I+ G++ ++ L L + YQV ++ AG YG PQ R RV
Sbjct: 842 RGILNAPTDGQPRDQPLDRNICMGVV-KFILRSLTALGYQVHFRILQAGQYGTPQGRQRV 900
Query: 622 FLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDE------GQQAELARKLLLQD 675
GA+ LP + P HD + V V Y GQ + ++
Sbjct: 901 IFLGARCDIPLPQFPTPQHDYP-KSVQAKNLPDGGVLYPYLRPTGCGQACVSLPAITTEE 959
Query: 676 AISDLPSVD 684
AI DLP D
Sbjct: 960 AIGDLPKFD 968
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 98/225 (43%), Gaps = 31/225 (13%)
Query: 187 ITYDLFDDAHVKAESGEEDYICKIVEMFEAVDGTPYFTAQWYYRARDTVIESNAHLIDQR 246
I Y + D + G +I ++VE + P + + R D V++ A D R
Sbjct: 556 IDYHVNDFVYHHNSGGNLLHIGQVVEFSDLSCEEPMVQVRRFGR-YDHVVKDKAIPSDNR 614
Query: 247 RVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLAIPHCDYYCDMMYLLPYSTFFSLP 306
R+F +++ ++ + K +A E A H +YCD+ SL
Sbjct: 615 RLFMTDVIISVKMKAVEGKAFVACPSSPWQREQWVKADDH--FYCDLFAK-------SLT 665
Query: 307 PENKRVSSETSSTISSDVDANEC---------EVGEPQKMDVKL--LDLYSGCGAMSTGL 355
P++ + T+ V N C E K KL L+L++G G +STGL
Sbjct: 666 PQSLEILQPTAL-----VHCNRCYAAVLEEATEEELLLKTSSKLRGLELFAGAGGLSTGL 720
Query: 356 CLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFL 400
+L+G + TRWAV+++E AC++ + NH + V N++ L
Sbjct: 721 ----DLSGF-VETRWAVELSESACKTFQANHQSSLVYNQNTSTLL 760
>gi|341868925|gb|AEK98586.1| domain rearranged methyltransferase 1 [Vitis amurensis]
Length = 137
Score = 77.4 bits (189), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/80 (46%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LPLPG VD I GGPPCQG SG NRF + + + + ++ F+ D+ +PKF L+ENV
Sbjct: 60 LPLPGQVDFINGGPPCQGFSGMNRFNQ--STWSKVQCEMILAFLSFADYFRPKFFLLENV 117
Query: 577 VDIVKFAKGLLGRYALARLI 596
+ V F KG R LA L+
Sbjct: 118 RNFVSFNKGQTFRLTLASLL 137
>gi|420429703|ref|ZP_14928733.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-20]
gi|393048322|gb|EJB49289.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-20]
Length = 361
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 93/195 (47%), Gaps = 35/195 (17%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
++++I GGPPCQG S + K+ L D +N + +++IV +KP+ ++ENV +++
Sbjct: 72 EINMIIGGPPCQGFSN----KGKNLGLKDPRNFLFLEYIEIVKAIKPEIFIIENVKNLIS 127
Query: 582 FAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHD 641
AKG RL + YQ+ ++ A YG+PQ R R F+ GA
Sbjct: 128 CAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGAS-------------- 173
Query: 642 VVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETE 701
F+ N + E ++ + +QDAISDL + + E E Y ++
Sbjct: 174 -------RFSFDFNLL--------EPSQSVNIQDAISDLAYLCSNEGAFESDYLNPIQSS 218
Query: 702 FQCFIRLRKDGKKLW 716
+Q +RKD KL+
Sbjct: 219 YQAL--MRKDSPKLY 231
>gi|257877765|ref|ZP_05657418.1| cytosine specific DNA methyltransferase [Enterococcus casseliflavus
EC20]
gi|257811931|gb|EEV40751.1| cytosine specific DNA methyltransferase [Enterococcus casseliflavus
EC20]
Length = 380
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 82/188 (43%), Gaps = 30/188 (15%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
++DVI GPPCQG S + D +NK + + VD +PK L+ENV +
Sbjct: 74 NIDVIIAGPPCQGFS-----LTGARDINDSRNKLYVAVVHAVDHFRPKAFLIENVPGMAT 128
Query: 582 FAKGLLGRYALARLIQMNYQVRMG--MMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPT 639
KG + + + M Y + + + A YG+PQ R R+F G + + P
Sbjct: 129 LYKGAVKQQIINTFEDMGYSISVTDKPLLAADYGVPQMRKRMFFVGFRKDLNYDYFEFPK 188
Query: 640 HDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPE 699
+ + T DAISDLPS+ + ++ +PY +EP+
Sbjct: 189 AYLSKDNYVGTA-----------------------DAISDLPSLIDTLGQESVPYSKEPQ 225
Query: 700 TEFQCFIR 707
+++Q +R
Sbjct: 226 SDYQKLMR 233
>gi|420448068|ref|ZP_14946952.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-44]
gi|393066881|gb|EJB67699.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-44]
Length = 355
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 93/195 (47%), Gaps = 35/195 (17%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
++++I GGPPCQG S + K+ L D +N + +++IV +KP+ ++ENV +++
Sbjct: 72 EINMIIGGPPCQGFSN----KGKNLGLKDPRNFLFLEYIEIVKAIKPEIFIIENVKNLIS 127
Query: 582 FAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHD 641
AKG RL + YQ+ ++ A YG+PQ R R F+ GA
Sbjct: 128 CAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGAS-------------- 173
Query: 642 VVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETE 701
F+ N + E ++ + +QDAISDL + + E E Y ++
Sbjct: 174 -------RFSFDFNLL--------EPSQSVNIQDAISDLAYLCSNEGSFESDYLNPIQSN 218
Query: 702 FQCFIRLRKDGKKLW 716
+Q +RKD KL+
Sbjct: 219 YQAL--MRKDSPKLY 231
>gi|420451207|ref|ZP_14950061.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-45]
gi|393065139|gb|EJB65969.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-45]
Length = 355
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 98/207 (47%), Gaps = 37/207 (17%)
Query: 512 FKSKILPLPG--DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPK 569
K K++ L ++++I GGPPCQG S + K+ L D +N + +++IV +KP+
Sbjct: 60 IKEKVIKLAQTLEINMIIGGPPCQGFSN----KGKNLGLKDPRNFLFLEYIEIVKAIKPE 115
Query: 570 FVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPT 629
++ENV +++ AKG RL + YQ+ ++ A YG+PQ R R F+ GA
Sbjct: 116 IFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGAS-- 173
Query: 630 EKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESR 689
F+ N + E ++ + +QDAISDL + + E
Sbjct: 174 -------------------RFSFDFNLL--------EPSQSVNIQDAISDLAYLCSNEGA 206
Query: 690 DEIPYDREPETEFQCFIRLRKDGKKLW 716
E Y ++ +Q +RKD KL+
Sbjct: 207 FESDYLNPIQSSYQAL--MRKDSPKLY 231
>gi|342882968|gb|EGU83532.1| hypothetical protein FOXB_05942 [Fusarium oxysporum Fo5176]
Length = 1335
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 79/176 (44%), Gaps = 18/176 (10%)
Query: 485 GPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNK 544
GPSE + + ++ G S +P GDVD I GG PC GF+R N
Sbjct: 843 GPSE-----VSPFLGSIDDLQRLAIEGEFSDSVPPIGDVDFISGGSPC---PGFSRLTND 894
Query: 545 DNPLADEKNKQLIV-FMDIVDFLKPKFVLMENVVDIVKFAKGL---LGRYALARLIQMNY 600
A KN+ L+ F VD +P++ L+ENV IV+ + + ++ + Y
Sbjct: 895 KTTAAQRKNQSLVAAFASCVDLYRPRYGLLENVPGIVQKTANRDQDVFSQLICAIVGLGY 954
Query: 601 QVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLP--PYALPTH----DVVLRGVIPT 650
Q + A A G PQ R RVFL A P +LP PY H + G++PT
Sbjct: 955 QAHFFFLDASACGSPQRRSRVFLAFAAPGHRLPHKPYQTHAHPQNTSRLSLGILPT 1010
>gi|15644682|ref|NP_206852.1| cytosine specific DNA methyltransferase (DDEM) [Helicobacter pylori
26695]
gi|410023283|ref|YP_006892536.1| cytosine specific DNA methyltransferase [Helicobacter pylori Rif1]
gi|410501052|ref|YP_006935579.1| cytosine specific DNA methyltransferase [Helicobacter pylori Rif2]
gi|410681569|ref|YP_006933971.1| cytosine specific DNA methyltransferase [Helicobacter pylori 26695]
gi|419416152|ref|ZP_13956734.1| cytosine specific DNA methyltransferase [Helicobacter pylori P79]
gi|2313124|gb|AAD07117.1| cytosine specific DNA methyltransferase (DDEM) [Helicobacter pylori
26695]
gi|384375626|gb|EIE30896.1| cytosine specific DNA methyltransferase [Helicobacter pylori P79]
gi|409893210|gb|AFV41268.1| cytosine specific DNA methyltransferase [Helicobacter pylori 26695]
gi|409894940|gb|AFV42862.1| cytosine specific DNA methyltransferase [Helicobacter pylori Rif1]
gi|409896603|gb|AFV44457.1| cytosine specific DNA methyltransferase [Helicobacter pylori Rif2]
Length = 355
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 98/207 (47%), Gaps = 37/207 (17%)
Query: 512 FKSKILPLPG--DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPK 569
K K++ L ++++I GGPPCQG S + K+ L D +N + +++IV +KP+
Sbjct: 60 IKEKVIKLAKKLEINMIIGGPPCQGFSN----KGKNLGLKDPRNFLFLEYIEIVKAIKPE 115
Query: 570 FVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPT 629
++ENV +++ AKG RL + YQ+ ++ A YG+PQ R R F+ GA
Sbjct: 116 IFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGAS-- 173
Query: 630 EKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESR 689
F+ N + E ++ + +QDAISDL + + E
Sbjct: 174 -------------------RFSFDFNLL--------EPSQSVNVQDAISDLAYLCSNEGA 206
Query: 690 DEIPYDREPETEFQCFIRLRKDGKKLW 716
E Y ++ +Q +RKD KL+
Sbjct: 207 FESDYLNPIQSSYQAL--MRKDSPKLY 231
>gi|206975132|ref|ZP_03236046.1| modification methylase HaeIII [Bacillus cereus H3081.97]
gi|206746553|gb|EDZ57946.1| modification methylase HaeIII [Bacillus cereus H3081.97]
Length = 352
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 88/200 (44%), Gaps = 43/200 (21%)
Query: 513 KSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVL 572
K+ P G +DVI GGPPCQG S + + + D++N F+ +V +KP + +
Sbjct: 60 KNVFCPYVGKIDVIIGGPPCQGFSQ----KGQRKTINDDRNFLFKYFVSVVGLIKPMYFV 115
Query: 573 MENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKL 632
MENV +++ KG + + Y + G++ A +G+PQ R R + G
Sbjct: 116 MENVPNLLTAEKGYFKKEIYDLFKSLGYSLSSGVLNAADFGVPQNRKRAVIIGK------ 169
Query: 633 PPYALPTHDVVLRGVIPTEF-----ERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYE 687
RG+ P EF E+NT+ DAISDL +++ E
Sbjct: 170 ------------RGLAPAEFPKPKNEKNTI----------------WDAISDLAFLESGE 201
Query: 688 SRDEIPYDREPETEFQCFIR 707
+ Y + E+ +Q +R
Sbjct: 202 GNEVQDYRKAAESFYQQVMR 221
>gi|416020937|ref|ZP_11566837.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. glycinea
str. B076]
gi|320321292|gb|EFW77421.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. glycinea
str. B076]
Length = 410
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 93/192 (48%), Gaps = 13/192 (6%)
Query: 521 GDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIV 580
G++D+I GGPPCQG S R+ + D +N ++ V +P+ VL+ENV +V
Sbjct: 79 GELDLIAGGPPCQGFSINAPKRSTE----DSRNHLFREYLRFVTEFQPRAVLIENVPGMV 134
Query: 581 KFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQ----PTEKLPPYA 636
F G L L + Y + ++ A YG+PQ R R + G++ PT P
Sbjct: 135 SFEGGATLDAILESLKDLGYDADVRILYAPHYGVPQTRWRTIILGSRCGVDPTALFPE-- 192
Query: 637 LPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDR 696
P H +R ++F + + + EL + ++DAI DLP++ N E +++ R
Sbjct: 193 -PLHHAPVRVNFTSQFAGKNLV-NLPRSLELPSHVTVKDAIGDLPALCNGEIGEQVKDYR 250
Query: 697 EP-ETEFQCFIR 707
P + +Q +R
Sbjct: 251 HPADNPYQQLMR 262
>gi|167042310|gb|ABZ07039.1| putative C-5 cytosine-specific DNA methylase [uncultured marine
crenarchaeote HF4000_ANIW97J3]
Length = 380
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 90/187 (48%), Gaps = 30/187 (16%)
Query: 523 VDVICGGPPCQGVSGFNRF-RNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
VDVI GGPPC+G S N+ RN NP+ N+ ++ ++ ++ LKPK +MENV I
Sbjct: 83 VDVIIGGPPCKGFSLTNKMTRNMKNPM----NRLVMDYVAMIRKLKPKAFVMENVPGIFA 138
Query: 582 FAKGLLGRYALARLIQMN-YQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTH 640
G + + ++ M Y ++ A YG+PQ R R F+ G+
Sbjct: 139 MEGGKIVKDLISEFRSMGYYNTDSWLLNAADYGVPQIRKRAFIVGS-------------- 184
Query: 641 DVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPET 700
R IP E R T + GQ A ++ + DAISDLP + + S Y ++P
Sbjct: 185 ----RSRIPIEKPRTTHGSN-GQ----APRVSVFDAISDLPKIPDGSSSSRAAY-KKPPN 234
Query: 701 EFQCFIR 707
+FQ +R
Sbjct: 235 KFQRQLR 241
>gi|420426239|ref|ZP_14925295.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-9]
gi|393044959|gb|EJB45949.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-9]
Length = 355
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 98/207 (47%), Gaps = 37/207 (17%)
Query: 512 FKSKILPLPG--DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPK 569
K K++ L ++++I GGPPCQG S + K+ L D +N + +++IV +KP+
Sbjct: 60 IKEKVIKLAQKLEINMIIGGPPCQGFSN----KGKNLGLKDPRNFLFLEYIEIVKAIKPE 115
Query: 570 FVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPT 629
++ENV +++ AKG RL + YQ+ ++ A YG+PQ R R F+ GA
Sbjct: 116 IFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGAS-- 173
Query: 630 EKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESR 689
F+ N + E ++ + +QDAISDL + + E
Sbjct: 174 -------------------RFSFDFNLL--------EPSQSVNIQDAISDLAYLCSNEGA 206
Query: 690 DEIPYDREPETEFQCFIRLRKDGKKLW 716
E Y ++ +Q +RKD KL+
Sbjct: 207 FESDYLNPIQSSYQAL--MRKDSPKLY 231
>gi|319639604|ref|ZP_07994351.1| cytosine-specific methyltransferase [Neisseria mucosa C102]
gi|317399175|gb|EFV79849.1| cytosine-specific methyltransferase [Neisseria mucosa C102]
Length = 348
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 85/190 (44%), Gaps = 36/190 (18%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+DVI GGPPCQG S + + DE+N+ F+D V F +PK LMENV +I+
Sbjct: 76 LDVIIGGPPCQGFSIAGK-----RMIDDERNQLYKAFVDFVRFYQPKAFLMENVPNIMSM 130
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG + + Q+ Y V+ ++ A YG+PQ R R F G +
Sbjct: 131 GKGAIKQQITQDFEQLGYIVKSQILMASDYGVPQNRKRAFFVGFK--------------- 175
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
G I EF + TV + + ++ AISDLP +Y D Y +E+
Sbjct: 176 --NGTI-FEFPKQTV----------NQYVTVKQAISDLP---DYSVDDGAAYPLLGSSEY 219
Query: 703 QCFIRLRKDG 712
Q +R G
Sbjct: 220 QHMMRQNSTG 229
>gi|209546991|ref|YP_002278909.1| DNA-cytosine methyltransferase [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209538235|gb|ACI58169.1| DNA-cytosine methyltransferase [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 355
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 97/220 (44%), Gaps = 40/220 (18%)
Query: 496 GLSNCGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFN-RFRNKDNPLADEKNK 554
G + G I + T + PL V+ GGPPCQG S N R R+ DNP KN
Sbjct: 44 GATLLGTDIAKVATIDVGPRHQPL-----VLFGGPPCQGFSTSNQRTRHADNP----KNW 94
Query: 555 QLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGL 614
F+ +V+ LKP++V+ ENV I++ G +L M Y++ G++ A +G
Sbjct: 95 LFREFLRMVETLKPEWVVFENVAGILQTDGGRFAEAFREQLKAMGYRIAFGILNAADFGC 154
Query: 615 PQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQ 674
PQ R R + A ++ P A+P +V PT L
Sbjct: 155 PQRRSRYIVIAALNSDPELPKAVPNVEV------PT----------------------LW 186
Query: 675 DAISDLPSVDNYESRDEIPYDREPETEFQCFIRLRKDGKK 714
AI DLP + N + DE+ Y P +E+ R+R D K
Sbjct: 187 QAIGDLPELLNGATVDELEYGGAPLSEYAR--RMRSDLAK 224
>gi|17225496|gb|AAL37432.1|AF328909_1 putative cytosine-specific DNA methyltransferase [Helicobacter
pylori]
gi|17225522|gb|AAL37451.1|AF328916_1 cytosine-specific DNA methyltransferase [Helicobacter pylori]
Length = 361
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 93/195 (47%), Gaps = 35/195 (17%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
++++I GGPPCQG S + K+ L D +N + +++IV +KP+ ++ENV +++
Sbjct: 72 EINMIIGGPPCQGFSN----KGKNLGLKDPRNFLFLEYIEIVKAIKPEIFIIENVKNLIS 127
Query: 582 FAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHD 641
AKG RL + YQ+ ++ A YG+PQ R R F+ GA
Sbjct: 128 CAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGAS-------------- 173
Query: 642 VVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETE 701
F+ N + E ++ + +QDAISDL + + E E Y ++
Sbjct: 174 -------RFSFDFNLL--------EPSQSVNVQDAISDLAYLCSNEGAFESDYLNPIQSS 218
Query: 702 FQCFIRLRKDGKKLW 716
+Q +RKD KL+
Sbjct: 219 YQAL--MRKDSPKLY 231
>gi|302900266|ref|XP_003048231.1| hypothetical protein NECHADRAFT_39810 [Nectria haematococca mpVI
77-13-4]
gi|256729163|gb|EEU42518.1| hypothetical protein NECHADRAFT_39810 [Nectria haematococca mpVI
77-13-4]
Length = 1354
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 69/143 (48%), Gaps = 7/143 (4%)
Query: 502 EKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIV-FM 560
++++ G + +PL GDVD I GG PC GF+ N + KN+ L+ F
Sbjct: 879 DELQRLAIQGEFANNVPLVGDVDFISGGSPC---PGFSLLTNDKTTITQRKNQSLVAAFG 935
Query: 561 DIVDFLKPKFVLMENVVDIVKFAKGL---LGRYALARLIQMNYQVRMGMMAAGAYGLPQF 617
+D +P++ L+ENV IV+ + + ++ + YQ + A A G PQ
Sbjct: 936 SFIDLYRPRYGLLENVPGIVQRKSNRDQDVFSQLICAIVGLGYQTHFFFLDASACGSPQR 995
Query: 618 RMRVFLWGAQPTEKLPPYALPTH 640
R RVFL A P +LP PTH
Sbjct: 996 RARVFLAFAAPGHRLPRRPNPTH 1018
>gi|420461148|ref|ZP_14959943.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-27]
gi|393074722|gb|EJB75481.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-27]
Length = 355
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 98/207 (47%), Gaps = 37/207 (17%)
Query: 512 FKSKILPLPG--DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPK 569
K K++ L ++++I GGPPCQG S + K+ L D +N + +++IV +KP+
Sbjct: 60 IKEKVIKLAQKLEINMIIGGPPCQGFSN----KGKNLGLKDPRNFLFLEYIEIVKAIKPE 115
Query: 570 FVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPT 629
++ENV +++ AKG RL + YQ+ ++ A YG+PQ R R F+ GA
Sbjct: 116 IFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGAS-- 173
Query: 630 EKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESR 689
F+ N + E ++ + +QDAISDL + + E
Sbjct: 174 -------------------RFSFDFNLL--------EPSQSVNVQDAISDLAYLCSNEGA 206
Query: 690 DEIPYDREPETEFQCFIRLRKDGKKLW 716
E Y ++ +Q +RKD KL+
Sbjct: 207 FESDYLNPIQSSYQAL--MRKDSPKLY 231
>gi|420416221|ref|ZP_14915332.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4044]
gi|393037667|gb|EJB38702.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4044]
Length = 361
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 93/195 (47%), Gaps = 35/195 (17%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
++++I GGPPCQG S + K+ L D +N + ++++V +KP+ ++ENV +++
Sbjct: 72 EINMIIGGPPCQGFSN----KGKNLGLKDPRNFLFLEYIEVVKAIKPEIFIIENVKNLIS 127
Query: 582 FAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHD 641
AKG RL + YQ+ ++ A YG+PQ R R F+ GA
Sbjct: 128 CAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGAS-------------- 173
Query: 642 VVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETE 701
F+ N + E ++ + +QDAISDL + + E E Y ++
Sbjct: 174 -------RFSFDFNLL--------EPSQSVNIQDAISDLAYLCSNEGAFESDYLNPIQSS 218
Query: 702 FQCFIRLRKDGKKLW 716
+Q +RKD KL+
Sbjct: 219 YQAL--MRKDSPKLY 231
>gi|444301299|gb|AGD98765.1| C5 cytosine DNA methyltransferase [Helicobacter pylori]
Length = 354
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 93/195 (47%), Gaps = 35/195 (17%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
++++I GGPPCQG S + K+ L D +N + +++IV LKP+ +++NV +++
Sbjct: 72 EINMIIGGPPCQGFSN----KGKNLGLKDPRNFLFLEYIEIVKALKPEIFIIKNVKNLIS 127
Query: 582 FAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHD 641
AKG RL + YQ+ ++ A YG+PQ R R F+ GA
Sbjct: 128 CAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQSRERAFIVGAS-------------- 173
Query: 642 VVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETE 701
F+ N + E ++ + +QDAISDL + + E E Y ++
Sbjct: 174 -------RFSFDFNLL--------EPSQSVNIQDAISDLAYLCSNEGAFESDYLNPIQSS 218
Query: 702 FQCFIRLRKDGKKLW 716
+Q +RKD KL+
Sbjct: 219 YQAL--MRKDSPKLY 231
>gi|323650463|gb|ADX97312.1| M.FspI [Fischerella muscicola SAG 1427-1 = PCC 73103]
Length = 385
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 93/191 (48%), Gaps = 17/191 (8%)
Query: 522 DVDVICGGPPCQGVS-----GFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
++ + GGPPCQG S G+ R+ N D +N+ F++ V+ +P +V+MENV
Sbjct: 72 ELTALIGGPPCQGFSRNIPAGY-RYLN------DSRNQLYRTFLEFVEEFRPIYVVMENV 124
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+I+K G++ +L ++Y+V + A YG+PQ R R F + + +
Sbjct: 125 PEILKAYNGVIREEITQQLESLSYKVVSSSLNAAHYGIPQTRSRAFFIAS--LDHYLHFP 182
Query: 637 LPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDR 696
PTH +R T N + E + L + ++DAI DLP ++ + + Y
Sbjct: 183 KPTHFGDIRSDYRTRKSCNQLNLLETNVSPL---VTVRDAIGDLPPLEAGQKYEAEVYPS 239
Query: 697 EPETEFQCFIR 707
P+T +Q IR
Sbjct: 240 APQTTYQAMIR 250
>gi|428308044|ref|YP_007144869.1| DNA-cytosine methyltransferase [Crinalium epipsammum PCC 9333]
gi|428249579|gb|AFZ15359.1| DNA-cytosine methyltransferase [Crinalium epipsammum PCC 9333]
Length = 395
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 27/211 (12%)
Query: 499 NCGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIV 558
N E +K + F + + L G+VD++ G PPCQG S ++N+ +P +N +
Sbjct: 43 NISENVKCVDLNTFDVRTI-LDGNVDIVVGSPPCQGFSN-EGYKNEKDP----RNSLVWK 96
Query: 559 FMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQM-NYQVRMGMMAAGAYGLPQF 617
F D ++ L PK + ENV KG+ + RL M YQ ++ + YG+PQ
Sbjct: 97 FFDFIEILTPKVWIFENVPGFKTSYKGIYFKQLQQRLELMPAYQWNYFILNSSDYGVPQK 156
Query: 618 RMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAI 677
R R F GA+ + P A TH + G+ + + L ++I
Sbjct: 157 RSRFFAIGAKKFQPQRPEA--THSKL------------------GEVLGTDKAISLWESI 196
Query: 678 SDLPSVDNYESRDEIPYDREPETEFQCFIRL 708
SDLP + E + YD+ E E+Q + RL
Sbjct: 197 SDLPKIGIGEKKGIFEYDKPAECEYQKWARL 227
>gi|398808843|ref|ZP_10567701.1| DNA-methyltransferase Dcm [Variovorax sp. CF313]
gi|398086852|gb|EJL77459.1| DNA-methyltransferase Dcm [Variovorax sp. CF313]
Length = 429
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 90/192 (46%), Gaps = 26/192 (13%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
VD++ GGPPCQG S R L DE+N+ + IV LKP+ LMENV ++
Sbjct: 92 VDLVFGGPPCQGFSQIGMRR-----LDDERNELYQQYTRIVAKLKPRVFLMENVPNLALM 146
Query: 583 AKGLLGRYALARLIQMNY-QVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHD 641
KG L + Y M ++A YG+PQ R RV G + E+L +
Sbjct: 147 NKGHFKHLILKEFADLGYSNTVMLRVSADDYGVPQTRQRVIFVGTRDEEQLNVDLGSLCE 206
Query: 642 VVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPE-T 700
VL G+ ++AR + + +AISDLP+ +S D +PY + + T
Sbjct: 207 WVLEGL------------------KVARPVTVAEAISDLPA-KIVDSGDVMPYPKTTKLT 247
Query: 701 EFQCFIRLRKDG 712
FQ +RL DG
Sbjct: 248 PFQKDMRLDHDG 259
Score = 44.3 bits (103), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 6/60 (10%)
Query: 342 LDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLT 401
L L+SGCG G C G +G + R AV++++YAC++ + N P T++ + FLT
Sbjct: 25 LSLFSGCG----GFCEGIESSGFEV--RAAVELDKYACETYRHNFPRTKLFEGDVQSFLT 78
>gi|374586019|ref|ZP_09659111.1| DNA-cytosine methyltransferase [Leptonema illini DSM 21528]
gi|373874880|gb|EHQ06874.1| DNA-cytosine methyltransferase [Leptonema illini DSM 21528]
Length = 340
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 73/128 (57%), Gaps = 8/128 (6%)
Query: 520 PGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDI 579
PG++D++ G PPCQG S R RNK NP+ADE+N+ + F+ + L+PK +LMENV +
Sbjct: 71 PGELDLLAGCPPCQGFSTI-RTRNKPNPVADERNELIFDFLRLALALRPKAILMENVPGL 129
Query: 580 VKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPT 639
+K + L + A RL Y V + ++ A +G+PQ R R+ L + +LP+
Sbjct: 130 MKDRR--LEKTA-RRLRAAGYDVEVDVIDAADFGVPQRRKRMILVATRTGRA----SLPS 182
Query: 640 HDVVLRGV 647
D R V
Sbjct: 183 GDSKQRTV 190
>gi|341868927|gb|AEK98587.1| domain rearranged methyltransferase 1 [Vitis amurensis]
Length = 137
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LPLPG VD I GGPPCQG SG NRF + + + + ++ F+ D+ +PKF L+ENV
Sbjct: 60 LPLPGQVDFINGGPPCQGFSGMNRF--TQSTWSKVQCEMILAFLSFADYFRPKFFLLENV 117
Query: 577 VDIVKFAKGLLGRYALARLI 596
+ V F KG R LA L+
Sbjct: 118 RNFVSFNKGQTFRLTLASLL 137
>gi|367031908|ref|XP_003665237.1| hypothetical protein MYCTH_2095291 [Myceliophthora thermophila ATCC
42464]
gi|347012508|gb|AEO59992.1| hypothetical protein MYCTH_2095291 [Myceliophthora thermophila ATCC
42464]
Length = 2146
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 71/129 (55%), Gaps = 9/129 (6%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIV-FMDIVDFLKPKFVLMEN 575
+P PG+V+ I G PC GF+ LA KN+ L+ F VDF +PK+ ++EN
Sbjct: 1609 VPRPGEVEFISAGSPC---PGFSLLTPDKTTLAQVKNQSLVASFASFVDFYRPKYGILEN 1665
Query: 576 VVDIVKF----AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEK 631
VV IV+ ++ +L + A ++ M YQ ++ + A ++G PQ R RVFL+ A P
Sbjct: 1666 VVTIVQARHNRSQDVLSQLFCA-IVGMGYQAQLVLGDAWSHGAPQGRSRVFLYFAAPGLH 1724
Query: 632 LPPYALPTH 640
LP L +H
Sbjct: 1725 LPDAPLLSH 1733
>gi|384893666|ref|YP_005767715.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Sat464]
gi|308062920|gb|ADO04807.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Sat464]
Length = 355
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 98/207 (47%), Gaps = 37/207 (17%)
Query: 512 FKSKILPLPG--DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPK 569
K K++ L ++++I GGPPCQG S + K+ L D +N + +++IV +KP+
Sbjct: 60 IKEKVIKLAQTLEINMIIGGPPCQGFSN----KGKNLGLKDPRNFLFLEYIEIVKAIKPE 115
Query: 570 FVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPT 629
++ENV +++ AKG RL + YQ+ ++ A YG+PQ R R F+ GA
Sbjct: 116 IFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGAS-- 173
Query: 630 EKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESR 689
F+ N + E ++ + +QDAISDL + + E
Sbjct: 174 -------------------RFSFDFNLL--------EPSQSVDVQDAISDLAYLCSNEGA 206
Query: 690 DEIPYDREPETEFQCFIRLRKDGKKLW 716
E Y ++ +Q +RKD KL+
Sbjct: 207 FESDYLNPIQSSYQAL--MRKDSPKLY 231
>gi|420464739|ref|ZP_14963506.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-6]
gi|393082226|gb|EJB82942.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-6]
Length = 361
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 98/208 (47%), Gaps = 37/208 (17%)
Query: 511 GFKSKILPLPG--DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKP 568
K K++ L +V++I GGPPCQG S + K+ L D +N + +++IV +KP
Sbjct: 59 AIKEKVIKLAQTLEVNMIIGGPPCQGFSN----KGKNLGLKDPRNFLFLEYIEIVKAIKP 114
Query: 569 KFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQP 628
+ ++ENV +++ AKG RL + YQ+ ++ A YG+PQ R R F+ GA
Sbjct: 115 EIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGAS- 173
Query: 629 TEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYES 688
F+ N + E ++ + +Q+AISDL + + E
Sbjct: 174 --------------------RFSFDFNLL--------EPSQSVNIQEAISDLAYLCSNEG 205
Query: 689 RDEIPYDREPETEFQCFIRLRKDGKKLW 716
E Y ++ +Q +RKD KL+
Sbjct: 206 AFESDYLNPIQSSYQAL--MRKDSPKLY 231
>gi|386745575|ref|YP_006218792.1| cytosine specific DNA methyltransferase [Helicobacter pylori
HUP-B14]
gi|384551824|gb|AFI06772.1| cytosine specific DNA methyltransferase [Helicobacter pylori
HUP-B14]
Length = 650
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 37/206 (17%)
Query: 513 KSKILPLPG--DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKF 570
K K++ L ++++I GGPPCQG S + K+ L D +N + +++IV +KP+
Sbjct: 356 KEKVIELAKKLEINMIIGGPPCQGFSN----KGKNLGLKDPRNFLFLEYIEIVKAIKPEI 411
Query: 571 VLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTE 630
++ENV +++ AKG RL + YQ+ ++ A YG+PQ R R F+ GA
Sbjct: 412 FIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGAS--- 468
Query: 631 KLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRD 690
F+ N + E ++ + +QDAISDL + + E
Sbjct: 469 ------------------RFSFDFNLL--------EPSQSVNVQDAISDLAYLCSNEGAF 502
Query: 691 EIPYDREPETEFQCFIRLRKDGKKLW 716
E Y ++ +Q +RKD KL+
Sbjct: 503 ESDYLNPIQSSYQAL--MRKDSPKLY 526
>gi|311221492|gb|ADP76553.1| DNA methyltransferase [Helicobacter pylori]
Length = 587
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 37/206 (17%)
Query: 513 KSKILPLPG--DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKF 570
K K++ L ++++I GGPPCQG S + K+ L D +N + +++IV +KP+
Sbjct: 61 KEKVIKLAKKLEINMIIGGPPCQGFSN----KGKNLGLKDPRNFLFLEYIEIVKAIKPEI 116
Query: 571 VLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTE 630
++ENV +++ AKG RL + YQ+ ++ A YG+PQ R R F+ GA
Sbjct: 117 FIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGAS--- 173
Query: 631 KLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRD 690
F+ N + E ++ + +QDAISDL + + E
Sbjct: 174 ------------------RFSFDFNLL--------EPSQSVNVQDAISDLAYLCSNEGAF 207
Query: 691 EIPYDREPETEFQCFIRLRKDGKKLW 716
E Y ++ +Q +RKD KL+
Sbjct: 208 ESDYLNPIQSSYQAL--MRKDSPKLY 231
>gi|317127844|ref|YP_004094126.1| DNA-cytosine methyltransferase [Bacillus cellulosilyticus DSM 2522]
gi|315472792|gb|ADU29395.1| DNA-cytosine methyltransferase [Bacillus cellulosilyticus DSM 2522]
Length = 360
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 60/108 (55%), Gaps = 3/108 (2%)
Query: 516 ILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMEN 575
+ L GD+DVI GGPPCQG S NR++ + +AD +NK ++ V+ PK VL+EN
Sbjct: 65 MFDLTGDIDVIVGGPPCQGFSSANRWQKE---MADPRNKLFYEYIRFVEVFMPKVVLIEN 121
Query: 576 VVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFL 623
V I+ G + + L + Y V ++ A +G+PQ R+R F
Sbjct: 122 VRGILTRDNGYARKKIYSILENLGYIVDSAVLDASEFGVPQKRLRAFF 169
>gi|420443049|ref|ZP_14941978.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-41]
gi|393061454|gb|EJB62319.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-41]
Length = 361
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 98/207 (47%), Gaps = 37/207 (17%)
Query: 512 FKSKILPLPG--DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPK 569
K K++ L ++++I GGPPCQG S + K+ L D +N + +++IV +KP+
Sbjct: 60 IKEKVIKLAQKLEINMIIGGPPCQGFSN----KGKNLGLKDPRNFLFLEYIEIVKAIKPE 115
Query: 570 FVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPT 629
++ENV +++ AKG RL + YQ+ ++ A YG+PQ R R F+ GA
Sbjct: 116 IFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGAS-- 173
Query: 630 EKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESR 689
F+ N + E ++ + +QDAISDL + + E
Sbjct: 174 -------------------RFSFDFNLL--------EPSQSVSVQDAISDLAYLCSNEGS 206
Query: 690 DEIPYDREPETEFQCFIRLRKDGKKLW 716
E Y ++ +Q +RK+ KL+
Sbjct: 207 FESDYLNPIQSSYQAL--MRKNSPKLY 231
>gi|347836057|emb|CCD50629.1| hypothetical protein [Botryotinia fuckeliana]
Length = 1459
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 69/118 (58%), Gaps = 11/118 (9%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFM-DIVDFLKPKFVLMEN 575
+PLPGDVDVI G PCQG S N + D L +N+ LI + +DF +PK+ L+EN
Sbjct: 773 IPLPGDVDVIMAGSPCQGFSRMNSNKGNDQSL---RNQSLIASVAAYIDFYRPKYGLLEN 829
Query: 576 VVDIVKFAKGL-----LGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQP 628
V+++ + KGL + + ++ + YQV++ ++ + ++G Q R R+F+ A P
Sbjct: 830 VLNMAQ--KGLRRDEDVLSQLICTIVGLGYQVQLFLLDSWSFGSSQSRSRIFVSFAAP 885
>gi|358394495|gb|EHK43888.1| hypothetical protein TRIATDRAFT_36027 [Trichoderma atroviride IMI
206040]
Length = 1253
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 97/206 (47%), Gaps = 17/206 (8%)
Query: 504 IKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLI-VFMDI 562
++ G +K +P GDVD I GG PC GF+ N A KN+ L+ F
Sbjct: 792 LQRLSMQGDFAKNVPQIGDVDFISGGSPC---PGFSALTNDKTTAAQRKNQSLVAAFASF 848
Query: 563 VDFLKPKFVLMENVVDIV--KFAKGL-LGRYALARLIQMNYQVRMGMMAAGAYGLPQFRM 619
VD +PK+ ++ENV IV K A+ + + L+ + YQ + A + G PQ R
Sbjct: 849 VDLYRPKYGVLENVPGIVNKKTARDQDVFSQLICALVGLGYQTHFFFLDASSCGSPQRRP 908
Query: 620 RVFLWGAQPTEKLP--PYALPTHDVVLR----GVIPTEFERNTVAYDEGQQAELARKLLL 673
R+F+ A P +LP P +H R G +P ++A E A + +
Sbjct: 909 RIFVVFAAPGLELPKKPPHTHSHPANTRELGIGYLPNG---QSMAAREMPTATPFKYVTA 965
Query: 674 QDAISDLPSVDNYESRDEIPY-DREP 698
++A+SDLP++ + + +PY D P
Sbjct: 966 EEAVSDLPAIHDAQPDICVPYPDHRP 991
>gi|210134246|ref|YP_002300685.1| cytosine specific DNA methyltransferase [Helicobacter pylori P12]
gi|210132214|gb|ACJ07205.1| cytosine specific DNA methyltransferase [Helicobacter pylori P12]
Length = 355
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 98/208 (47%), Gaps = 37/208 (17%)
Query: 511 GFKSKILPLPG--DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKP 568
K K++ L ++++I GGPPCQG S + K+ L D +N + +++IV +KP
Sbjct: 59 AIKEKVIKLAQKLEINMIIGGPPCQGFSN----KGKNLGLKDPRNFLFLEYIEIVKAIKP 114
Query: 569 KFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQP 628
+ ++ENV +++ AKG RL + YQ+ ++ A YG+PQ R R F+ GA
Sbjct: 115 EIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGAS- 173
Query: 629 TEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYES 688
F+ N + E ++ + +QDAISDL + + E
Sbjct: 174 --------------------RFSFDFNLL--------EPSQSVNVQDAISDLAYLCSNEG 205
Query: 689 RDEIPYDREPETEFQCFIRLRKDGKKLW 716
E Y ++ +Q +RK+ KL+
Sbjct: 206 AFESDYLNPIQSSYQAL--MRKNSSKLY 231
>gi|145218883|ref|YP_001129592.1| DNA-cytosine methyltransferase [Chlorobium phaeovibrioides DSM 265]
gi|145205047|gb|ABP36090.1| DNA-cytosine methyltransferase [Chlorobium phaeovibrioides DSM 265]
Length = 377
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 85/186 (45%), Gaps = 25/186 (13%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
DV ++ GGPPCQG S +N+ DE+N ++ V L P +V+ ENV K
Sbjct: 72 DVTLVSGGPPCQGFSTVGS-KNRR----DERNSLFYEYLRAVAELNPLYVIFENVSGFKK 126
Query: 582 FAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHD 641
G L M Y + ++ A YGLPQ R R + G + + LP +LP+
Sbjct: 127 MYDGEAYLALTTELRSMGYDLASSILEASDYGLPQRRQRTIIVGWK--KHLPAVSLPS-- 182
Query: 642 VVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETE 701
PT F + A+KL + DAISDLP ++ + +E Y P+ +
Sbjct: 183 -------PTHFSSEDLFGG-------AKKLTVMDAISDLPPLEANSTSNE--YASSPKND 226
Query: 702 FQCFIR 707
+Q +R
Sbjct: 227 YQQRMR 232
>gi|420501970|ref|ZP_15000511.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-41]
gi|393153250|gb|EJC53543.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-41]
Length = 355
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 93/195 (47%), Gaps = 35/195 (17%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
++++I GGPPCQG S + K+ L D +N + +++IV +KP+ ++ENV +++
Sbjct: 72 EINMIIGGPPCQGFSN----KGKNLGLKDPRNFLFLEYIEIVKAIKPEIFIIENVKNLIS 127
Query: 582 FAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHD 641
AKG RL + YQ+ ++ A YG+PQ R R F+ GA
Sbjct: 128 CAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGAS-------------- 173
Query: 642 VVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETE 701
F+ N + E ++ + +Q+AISDL + + E E Y ++
Sbjct: 174 -------RFSFDFNLL--------EPSQSVNIQEAISDLAYLCSNEGSFESDYLNPIQSS 218
Query: 702 FQCFIRLRKDGKKLW 716
+Q +RKD KL+
Sbjct: 219 YQAL--MRKDSPKLY 231
>gi|419648632|ref|ZP_14179966.1| type II DNA modification methyltransferase [Campylobacter jejuni
subsp. jejuni LMG 9217]
gi|380626143|gb|EIB44638.1| type II DNA modification methyltransferase [Campylobacter jejuni
subsp. jejuni LMG 9217]
Length = 356
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 84/189 (44%), Gaps = 35/189 (18%)
Query: 521 GDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIV 580
G +D++ GGPPCQ S + + DE+ ++ ++ L+PK + ENV+ ++
Sbjct: 65 GKIDLLLGGPPCQSYSTLGKRK------MDERANLFQEYLRVLKILQPKIFIFENVIGLL 118
Query: 581 KFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALP-- 638
KG L +Y + ++NY V ++ A YG+PQ R R+ + G + + P
Sbjct: 119 SMQKGELFKYICCQFKKINYVVDYSILNAAFYGVPQIRERLIIVGIRQDIYYGSFIFPQK 178
Query: 639 THDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREP 698
THD + + L++A+ DLP + + E+ + Y +P
Sbjct: 179 THD---------------------------KFVSLKEALDDLPFIQSGENGNNKGYRFKP 211
Query: 699 ETEFQCFIR 707
F F+R
Sbjct: 212 NNAFLSFVR 220
>gi|188575624|ref|YP_001912553.1| DNA (cytosine-5)-methyltransferase PliMCI [Xanthomonas oryzae pv.
oryzae PXO99A]
gi|188520076|gb|ACD58021.1| DNA (cytosine-5)-methyltransferase PliMCI [Xanthomonas oryzae pv.
oryzae PXO99A]
Length = 395
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 93/197 (47%), Gaps = 13/197 (6%)
Query: 521 GDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIV 580
G++D+I GGPPCQG S R+ + D +N ++ V +P+ VL+ENV +V
Sbjct: 64 GELDLIAGGPPCQGFSINAPKRSTE----DSRNHLFREYLRFVTEFQPRAVLIENVPGMV 119
Query: 581 KFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQ----PTEKLPPYA 636
F G L L Q+ Y + ++ A YG+PQ R R + G++ PT P
Sbjct: 120 SFEGGATLDAILESLKQLGYDADVRILYAPHYGVPQTRWRTIILGSRCGIDPTALFPE-- 177
Query: 637 LPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDR 696
P +R ++F + + + EL + ++DAI DLP + N E + + R
Sbjct: 178 -PLRQAPVRVNFTSQFAGKNLV-NLPRSLELPSHVTVKDAIGDLPVLRNGEIGEPVKDYR 235
Query: 697 EP-ETEFQCFIRLRKDG 712
P + +Q +R+ G
Sbjct: 236 HPVDNPYQQLMRVGSTG 252
>gi|392597870|gb|EIW87192.1| S-adenosyl-L-methionine-dependent methyltransferase [Coniophora
puteana RWD-64-598 SS2]
Length = 1113
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 83/180 (46%), Gaps = 21/180 (11%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
++D I G PCQ S N ++ D K ++ + VD++KPK+++ ENV +
Sbjct: 694 EIDCIVAGFPCQPHSRMNMYQRT----TDSKTYLMLNLLSWVDYIKPKYIMFENVRGFLS 749
Query: 582 F------------AKGL-LG--RYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGA 626
F G+ +G ++ + L +M+YQ R ++ A YG PQ R+R FL GA
Sbjct: 750 FRLRARQKNRHTITGGIEMGGLKFLIRALTEMDYQCRFAVLQAAHYGTPQGRVRFFLVGA 809
Query: 627 QPTEKLPPYALPTHDVVLRG--VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVD 684
+ LP P+HD L VI R+ Q R + ++DAI DL D
Sbjct: 810 RRGLPLPDLPQPSHDFPLEDALVIHLPGGRDVHPILAVQGTAPHRFVTVEDAIGDLKRFD 869
>gi|420486671|ref|ZP_14985279.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-8]
gi|420520558|ref|ZP_15018989.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-8b]
gi|393104224|gb|EJC04781.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-8]
gi|393127145|gb|EJC27590.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-8b]
Length = 361
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 98/207 (47%), Gaps = 37/207 (17%)
Query: 512 FKSKILPLPG--DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPK 569
K K++ L ++++I GGPPCQG S + K+ L D +N + +++IV +KP+
Sbjct: 60 IKEKVIKLAQKLEINMIIGGPPCQGFSN----KGKNLGLKDPRNFLFLEYIEIVKAIKPE 115
Query: 570 FVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPT 629
++ENV +++ AKG RL + YQ+ ++ A YG+PQ R R F+ GA
Sbjct: 116 IFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGAS-- 173
Query: 630 EKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESR 689
F+ N + E ++ + +Q+AISDL + + E
Sbjct: 174 -------------------RFSFDFNLL--------EPSQSVNIQEAISDLAYLCSNEGA 206
Query: 690 DEIPYDREPETEFQCFIRLRKDGKKLW 716
E Y ++ +Q +RKD KL+
Sbjct: 207 FESDYLNPIQSSYQAL--MRKDSPKLY 231
>gi|420454595|ref|ZP_14953425.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-14]
gi|393072945|gb|EJB73719.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-14]
Length = 281
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 90/192 (46%), Gaps = 35/192 (18%)
Query: 525 VICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAK 584
+I GGPPCQG S + K+ L D +N + +++IV +KP+ ++ENV +I+ AK
Sbjct: 1 MIIGGPPCQGFSN----KGKNLGLKDPRNFLFLEYIEIVKAIKPEIFIIENVKNIISCAK 56
Query: 585 GLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVL 644
G RL + YQ+ ++ A YG+PQ R R F+ GA
Sbjct: 57 GYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGAS----------------- 99
Query: 645 RGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQC 704
F+ N + E ++ + +QDAISDL + + E E Y ++ +Q
Sbjct: 100 ----RFNFDFNLL--------EPSQSVNIQDAISDLAYLCSNEGAFESDYLNPIQSSYQA 147
Query: 705 FIRLRKDGKKLW 716
+RKD KL+
Sbjct: 148 L--MRKDSPKLY 157
>gi|290968468|ref|ZP_06560007.1| DNA (cytosine-5-)-methyltransferase [Megasphaera genomosp. type_1
str. 28L]
gi|290781464|gb|EFD94053.1| DNA (cytosine-5-)-methyltransferase [Megasphaera genomosp. type_1
str. 28L]
Length = 699
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 95/209 (45%), Gaps = 39/209 (18%)
Query: 511 GFKSKILPLP--GDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKP 568
K KI+ L V++I GGPPCQG S + K L D +N I ++ +V LKP
Sbjct: 394 AIKEKIINLSKKNKVNMIIGGPPCQGFS----LKGKKLGLDDPRNFLFIEYLHLVQELKP 449
Query: 569 KFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRV-FLWGAQ 627
++ENV ++ + G ++ + ++ Y+V +G++ A YG+PQ R RV FL
Sbjct: 450 LVFVIENVKSLMSTSNGWFKNQIISEIKKLGYEVSVGIVRASDYGVPQNRERVIFLCSKN 509
Query: 628 PTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYE 687
LP PT + TV +DAI DL +++ E
Sbjct: 510 KAISLPE--------------PTVKKTTTV----------------RDAIEDLAYLNSNE 539
Query: 688 SRDEIPYDREPETEFQCFIRLRKDGKKLW 716
E Y E +TE+Q +RKD +L+
Sbjct: 540 GDFEQSYITEAKTEYQKL--MRKDSDRLY 566
Score = 46.2 bits (108), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 58/109 (53%), Gaps = 22/109 (20%)
Query: 335 QKMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETE---- 390
++M+ ++LDL+ G G MS G+ ++ VT+ A+DINE Q+ K N PE+E
Sbjct: 334 KRMEFRILDLFCGAGGMSYGMHKNSHF-----VTKVALDINEKLAQTFKENIPESELIIG 388
Query: 391 -VRNESAEDFLTLLREWEKL--------CISFSLIARK----DPQQQLY 426
+++++ ++ + L + K+ C FSL +K DP+ L+
Sbjct: 389 DIQDKAIKEKIINLSKKNKVNMIIGGPPCQGFSLKGKKLGLDDPRNFLF 437
>gi|390993340|ref|ZP_10263514.1| DNA-cytosine methyltransferase family protein [Xanthomonas
axonopodis pv. punicae str. LMG 859]
gi|372551927|emb|CCF70489.1| DNA-cytosine methyltransferase family protein [Xanthomonas
axonopodis pv. punicae str. LMG 859]
Length = 404
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 94/194 (48%), Gaps = 7/194 (3%)
Query: 521 GDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIV 580
G++D++ GGPPCQG S R+ + D +N ++ V +P+ VL+ENV +V
Sbjct: 73 GELDLVAGGPPCQGFSINAPKRSTE----DSRNHLFREYLRFVTEFQPRAVLIENVPGMV 128
Query: 581 KFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQ-PTEKLPPYALPT 639
F G L L Q+ Y + ++ A YG+PQ R R + G++ + + + P
Sbjct: 129 SFEGGATLDAILESLKQLGYDADVRILYAPHYGVPQTRWRTIILGSRCGVDPMALFPEPL 188
Query: 640 HDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREP- 698
+R ++F + + + EL + ++DAI DLP++ N E +++ R P
Sbjct: 189 RQAPVRVNFTSQFAGKNLV-NLPRSLELPSHVTVKDAIGDLPALHNGEIGEQVKDYRHPA 247
Query: 699 ETEFQCFIRLRKDG 712
+ +Q +R G
Sbjct: 248 DNPYQQLMRAGSTG 261
>gi|385224707|ref|YP_005784632.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori 83]
gi|332672853|gb|AEE69670.1| possible DNA (cytosine-5-)-methyltransferase [Helicobacter pylori
83]
Length = 281
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 91/192 (47%), Gaps = 35/192 (18%)
Query: 525 VICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAK 584
+I GGPPCQG S + K+ L D +N + +++IV LKP+ ++ENV +++ AK
Sbjct: 1 MIIGGPPCQGFSN----KGKNLGLKDPRNFLFLEYIEIVKALKPEIFIIENVKNLISCAK 56
Query: 585 GLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVL 644
G RL + YQ+ ++ A YG+PQ R R F+ GA
Sbjct: 57 GYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGAS----------------- 99
Query: 645 RGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQC 704
F+ N + E ++ + +QDAISDL + + E E Y ++ +Q
Sbjct: 100 ----RFSFDFNLL--------EPSQSVNIQDAISDLAYLCSNEGAFESDYLNPIQSSYQ- 146
Query: 705 FIRLRKDGKKLW 716
+ +RKD KL+
Sbjct: 147 -VLMRKDSPKLY 157
>gi|56695946|ref|YP_166300.1| C-5 cytosine-specific family DNA methylase [Ruegeria pomeroyi
DSS-3]
gi|56677683|gb|AAV94349.1| DNA methylase, C-5 cytosine-specific family [Ruegeria pomeroyi
DSS-3]
Length = 373
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 88/188 (46%), Gaps = 27/188 (14%)
Query: 520 PGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDI 579
PG++ V+ GGPPCQ S +N R + DE+ ++ IVD L+P++++MENV I
Sbjct: 70 PGELTVLAGGPPCQAYSVYNHQRG----MHDERATLFKEYLRIVDGLRPEWIVMENVTGI 125
Query: 580 VKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPT 639
G + L + Y+V ++ A YG+PQ R RV G + P + P
Sbjct: 126 YSIGGGEAVAAIKSELAALGYEVEEAVLRAEEYGVPQERRRVVFIGNRVGV---PISHPE 182
Query: 640 HDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPE 699
PT ++ + + ++DAI DLP+++N E++ + Y
Sbjct: 183 ---------PTHGPGRSMPF-----------VTIKDAIGDLPALENGEAKPDAAYLDGKP 222
Query: 700 TEFQCFIR 707
T +Q +R
Sbjct: 223 TSYQRQMR 230
>gi|418519200|ref|ZP_13085307.1| DNA (cytosine-5)-methyltransferase PliMCI [Xanthomonas axonopodis
pv. malvacearum str. GSPB1386]
gi|410700593|gb|EKQ59141.1| DNA (cytosine-5)-methyltransferase PliMCI [Xanthomonas axonopodis
pv. malvacearum str. GSPB1386]
Length = 400
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 94/194 (48%), Gaps = 7/194 (3%)
Query: 521 GDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIV 580
G++D++ GGPPCQG S R+ + D +N ++ V +P+ VL+ENV +V
Sbjct: 69 GELDLVAGGPPCQGFSINAPKRSTE----DSRNHLFREYLRFVTEFQPRAVLIENVPGMV 124
Query: 581 KFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQ-PTEKLPPYALPT 639
F G L L Q+ Y + ++ A YG+PQ R R + G++ + + + P
Sbjct: 125 SFEGGATLDAILESLKQLGYDADVRILYAPHYGVPQTRWRTIILGSRCGVDPMALFPEPL 184
Query: 640 HDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREP- 698
+R ++F + + + EL + ++DAI DLP++ N E +++ R P
Sbjct: 185 RQAPVRVNFTSQFAGKNLV-NLPRSLELPSHVTVKDAIGDLPALHNGEIGEQVKDYRHPA 243
Query: 699 ETEFQCFIRLRKDG 712
+ +Q +R G
Sbjct: 244 DNPYQQLMRAGSTG 257
>gi|420480059|ref|ZP_14978703.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-1]
gi|420510504|ref|ZP_15008994.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-1b]
gi|393097972|gb|EJB98564.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-1]
gi|393122245|gb|EJC22722.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-1b]
Length = 361
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 93/195 (47%), Gaps = 35/195 (17%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
++++I GGPPCQG S + K+ L D +N + +++IV +KP+ ++ENV +++
Sbjct: 72 EINMIIGGPPCQGFSN----KGKNLGLKDPRNFLFLEYIEIVKAIKPEIFIIENVKNLIS 127
Query: 582 FAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHD 641
AKG RL + YQ+ ++ A YG+PQ R R F+ GA
Sbjct: 128 CAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGAS-------------- 173
Query: 642 VVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETE 701
F+ N + E ++ + +Q+AISDL + + E E Y ++
Sbjct: 174 -------RFSFDFNLL--------EPSQSVNIQEAISDLAYLCSNEGAFESDYLNPVQSS 218
Query: 702 FQCFIRLRKDGKKLW 716
+Q +RKD KL+
Sbjct: 219 YQAL--MRKDSPKLY 231
>gi|363580908|ref|ZP_09313718.1| DNA-cytosine methyltransferase [Flavobacteriaceae bacterium HQM9]
Length = 346
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 88/197 (44%), Gaps = 38/197 (19%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
+VDVI GGPPCQG S + + DE+N+ F++ V+ KPK LMENV +I+
Sbjct: 72 EVDVIIGGPPCQGFSIAGK-----RIIEDERNQLYKTFVNFVEHFKPKAFLMENVPNIMS 126
Query: 582 FAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHD 641
G++ + + Y+V ++ A YG+PQ R R F G + + + +PT
Sbjct: 127 MGNGVIRNQIIKDFENLGYKVSHQILLASDYGVPQNRKRAFFVGLKNGSEF-KFPIPT-- 183
Query: 642 VVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETE 701
P K+ ++AISDL + D PY + ++
Sbjct: 184 ------TPN------------------NKITSEEAISDLTE---HTVNDGTPYLDKYKSS 216
Query: 702 FQCFIRLRKDGKKLWFN 718
FQ + ++G K FN
Sbjct: 217 FQ---KQMRNGNKFIFN 230
>gi|386748699|ref|YP_006221907.1| cytosine specific DNA methyltransferase [Helicobacter cetorum MIT
99-5656]
gi|384554941|gb|AFI06697.1| cytosine specific DNA methyltransferase [Helicobacter cetorum MIT
99-5656]
Length = 355
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 93/194 (47%), Gaps = 35/194 (18%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+++I GGPPCQG S + K+ L D +N + +++IV +KP+ ++ENV +++
Sbjct: 73 INMIIGGPPCQGFSN----KGKNLGLKDPRNFLFLEYIEIVKAIKPEIFIIENVKNLISC 128
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
AKG A+ + YQ+ ++ A YG+PQ R R F+ GA+
Sbjct: 129 AKGYFLEEIKAKFHALGYQLSYQILNAKDYGVPQSRERAFIVGAR--------------- 173
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
F+ N + E + + +++AISDL +++ E E Y ++ +
Sbjct: 174 ------HFSFDFNCL--------EPLKSVSVKEAISDLAYLNSNEGAFESSYLNPIQSNY 219
Query: 703 QCFIRLRKDGKKLW 716
Q +RKD +L+
Sbjct: 220 QAL--MRKDSTRLY 231
>gi|420463026|ref|ZP_14961804.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-4]
gi|393080554|gb|EJB81279.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-4]
Length = 361
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 93/195 (47%), Gaps = 35/195 (17%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
++++I GGPPCQG S + K+ L D +N + +++IV +KP+ ++ENV +++
Sbjct: 72 EINMIIGGPPCQGFSN----KGKNLGLKDPRNFLFLEYIEIVKAIKPEIFIIENVKNLIS 127
Query: 582 FAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHD 641
AKG RL + YQ+ ++ A YG+PQ R R F+ GA
Sbjct: 128 CAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGAS-------------- 173
Query: 642 VVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETE 701
F+ N + E ++ + +Q+AISDL + + E E Y ++
Sbjct: 174 -------RFSFDFNLL--------EPSQSVNIQEAISDLAYLCSNEGAFESDYLNPIQSS 218
Query: 702 FQCFIRLRKDGKKLW 716
+Q +RKD KL+
Sbjct: 219 YQAL--MRKDSPKLY 231
>gi|420424632|ref|ZP_14923696.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-5]
gi|393043219|gb|EJB44223.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-5]
Length = 361
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 98/207 (47%), Gaps = 37/207 (17%)
Query: 512 FKSKILPLPG--DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPK 569
K K++ L ++++I GGPPCQG S + K+ L D +N + +++IV +KP+
Sbjct: 60 IKEKVIKLAQKLEINMIIGGPPCQGFSN----KGKNLGLKDPRNFLFLEYIEIVKAIKPE 115
Query: 570 FVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPT 629
++ENV +++ AKG RL + YQ+ ++ A YG+PQ R R F+ GA
Sbjct: 116 IFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGAS-- 173
Query: 630 EKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESR 689
F+ N + E ++ + +Q+AISDL + + E
Sbjct: 174 -------------------RFSFDFNLL--------EPSQSVNIQEAISDLAYLCSNEGA 206
Query: 690 DEIPYDREPETEFQCFIRLRKDGKKLW 716
E Y ++ +Q +RKD KL+
Sbjct: 207 FESDYLNPIQSSYQAL--MRKDSPKLY 231
>gi|386752038|ref|YP_006225257.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Shi169]
gi|384558296|gb|AFH98763.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Shi169]
Length = 353
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 98/206 (47%), Gaps = 37/206 (17%)
Query: 513 KSKILPLPG--DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKF 570
K K++ L ++++I GGPPCQG S + K+ L D +N + +++IV +KP+
Sbjct: 61 KEKVIKLAQTLEINMIIGGPPCQGFSN----KGKNLGLKDPRNFLFLEYIEIVKAIKPEI 116
Query: 571 VLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTE 630
++ENV +++ AKG +L + YQ+ ++ A YG+PQ R R F+ GA
Sbjct: 117 FIIENVKNLISCAKGYFLEEIKEKLNALGYQLSYQILNAKDYGVPQNRERAFIVGAS--- 173
Query: 631 KLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRD 690
F+ N + E ++ + +QDAISDL + + E
Sbjct: 174 ------------------RFSFDFNLL--------EPSQSVNVQDAISDLAYLCSNEGAF 207
Query: 691 EIPYDREPETEFQCFIRLRKDGKKLW 716
E Y ++ +Q +RKD KL+
Sbjct: 208 ESDYLNPIQSSYQAL--MRKDSPKLY 231
>gi|188526860|ref|YP_001909547.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Shi470]
gi|188143100|gb|ACD47517.1| cytosine specific DNA methyltransferase (DDEM) [Helicobacter pylori
Shi470]
Length = 355
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 98/207 (47%), Gaps = 37/207 (17%)
Query: 512 FKSKILPLPG--DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPK 569
K K++ L ++++I GGPPCQG S + K+ L D +N + +++IV +KP+
Sbjct: 60 IKEKVIKLAQTLEINMIIGGPPCQGFSN----KGKNLGLKDPRNFLFLEYIEIVKAIKPE 115
Query: 570 FVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPT 629
++ENV +++ AKG +L + YQ+ ++ A YG+PQ R R F+ GA
Sbjct: 116 IFIIENVKNLISCAKGYFLEEIKEKLNALGYQLSYQILNAKDYGVPQNRERAFIVGAS-- 173
Query: 630 EKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESR 689
F+ N + E ++ + +QDAISDL + + E
Sbjct: 174 -------------------RFSFDFNLL--------EPSQSVNVQDAISDLAYLCSNEGA 206
Query: 690 DEIPYDREPETEFQCFIRLRKDGKKLW 716
E Y ++ +Q +RKD KL+
Sbjct: 207 FESDYLNPIQSSYQAL--MRKDSPKLY 231
>gi|384887098|ref|YP_005761609.1| cytosine specific DNA methyltransferase (DDEM) [Helicobacter pylori
52]
gi|261838928|gb|ACX98693.1| cytosine specific DNA methyltransferase (DDEM) [Helicobacter pylori
52]
Length = 355
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 98/207 (47%), Gaps = 37/207 (17%)
Query: 512 FKSKILPLPG--DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPK 569
K K++ L ++++I GGPPCQG S + K+ L D +N + +++IV +KP+
Sbjct: 60 IKEKVIKLAQTLEINMIIGGPPCQGFSN----KGKNLGLKDPRNFLFLEYIEIVKAIKPE 115
Query: 570 FVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPT 629
++ENV +++ AKG RL + YQ+ ++ A YG+PQ R R F+ GA
Sbjct: 116 IFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGAS-- 173
Query: 630 EKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESR 689
F+ N + E ++ + +QDAISDL + + E
Sbjct: 174 -------------------RFSFDFNLL--------EPSQSVNVQDAISDLAYLCSNEGA 206
Query: 690 DEIPYDREPETEFQCFIRLRKDGKKLW 716
E Y ++ +Q +RK+ KL+
Sbjct: 207 FESDYLNPIQSSYQAL--MRKNSPKLY 231
>gi|385227820|ref|YP_005787753.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Puno120]
gi|344334258|gb|AEN14702.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Puno120]
Length = 355
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 97/206 (47%), Gaps = 37/206 (17%)
Query: 513 KSKILPLPG--DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKF 570
K K++ L ++++I GGPPCQG S + K+ L D +N + +++IV LK +
Sbjct: 61 KEKVIKLAQTLEINMIIGGPPCQGFSN----KGKNLGLKDSRNFLFLEYIEIVKALKLEI 116
Query: 571 VLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTE 630
++ENV +++ AKG RL + YQ+ ++ A YG+PQ R R F+ GA
Sbjct: 117 FIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGAS--- 173
Query: 631 KLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRD 690
F+ N + E ++ + +QDAISDL + + E
Sbjct: 174 ------------------RFSFDFNLL--------ESSQNVNVQDAISDLAYLCSNEGAF 207
Query: 691 EIPYDREPETEFQCFIRLRKDGKKLW 716
E Y ++ +Q +RKD KL+
Sbjct: 208 ESDYLNPIQSSYQAL--MRKDSPKLY 231
>gi|385229364|ref|YP_005789280.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Puno135]
gi|344335802|gb|AEN17763.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Puno135]
Length = 355
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 98/207 (47%), Gaps = 37/207 (17%)
Query: 512 FKSKILPLPG--DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPK 569
K K++ L ++++I GGPPCQG S + K+ L D +N + +++IV +KP+
Sbjct: 60 IKEKVIKLAQKLEINMIIGGPPCQGFSN----KGKNLGLKDPRNFLFLEYIEIVKAIKPE 115
Query: 570 FVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPT 629
++ENV +++ AKG +L + YQ+ ++ A YG+PQ R R F+ GA
Sbjct: 116 IFIIENVKNLISCAKGYFLEEIKEKLNALGYQLSYQILNAKDYGVPQNRERAFIVGAS-- 173
Query: 630 EKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESR 689
F+ N + E ++ + +QDAISDL + + E
Sbjct: 174 -------------------RFSFDFNLL--------EPSQSVNVQDAISDLAYLCSNEGA 206
Query: 690 DEIPYDREPETEFQCFIRLRKDGKKLW 716
E Y ++ +Q +RKD KL+
Sbjct: 207 FESDYLNPIQSSYQAL--MRKDSPKLY 231
>gi|2894386|emb|CAA74996.1| Bpu10I (5m)cytosine-specific DNA modification methyltransferase
(C1) [Bacillus pumilus]
Length = 398
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 93/196 (47%), Gaps = 39/196 (19%)
Query: 523 VDVICGGPPCQG--VSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIV 580
+D + GGPPCQG +S NR RN D+P +N F+ ++ +KP+ V MENV +IV
Sbjct: 73 IDAVIGGPPCQGFSISASNR-RNPDDP----RNYLYRQFLRVIKLVKPRIVFMENVKEIV 127
Query: 581 KF----AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
KF K LL L ++ Y ++ ++ A +G+PQ R+R F+
Sbjct: 128 KFVLPNGKLLLDEIIFC-LEELGYSIKPFIINAADFGIPQERIRFFM------------- 173
Query: 637 LPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQD---AISDLPSV--DNYESRDE 691
V G +P + T + + +L R +D AISDLP+V +E D
Sbjct: 174 -----VASLGPVPDLLQEATYS----ETVDLLRPNKYRDVYSAISDLPAVYPRQHEEGDT 224
Query: 692 IPYDREPETEFQCFIR 707
YD +P +Q +R
Sbjct: 225 FEYDNQPVNNYQRLMR 240
>gi|386753565|ref|YP_006226783.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Shi112]
gi|384559823|gb|AFI00290.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Shi112]
Length = 281
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 90/192 (46%), Gaps = 35/192 (18%)
Query: 525 VICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAK 584
+I GGPPCQG S + K+ L D +N + +++IV LKP+ ++ENV +++ AK
Sbjct: 1 MIIGGPPCQGFSN----KGKNLGLKDPRNFLFLEYIEIVKALKPEIFIIENVKNLISCAK 56
Query: 585 GLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVL 644
G RL + YQ+ ++ A YG+PQ R R F+ GA
Sbjct: 57 GYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGAS----------------- 99
Query: 645 RGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQC 704
F+ N + E ++ + +QDAISDL + + E E Y ++ +Q
Sbjct: 100 ----RFSFDFNLL--------EPSQSVNVQDAISDLAYLCSNEGAFESDYLNPIQSSYQA 147
Query: 705 FIRLRKDGKKLW 716
+RKD KL+
Sbjct: 148 L--MRKDSPKLY 157
>gi|170084587|ref|XP_001873517.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164651069|gb|EDR15309.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1273
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 89/210 (42%), Gaps = 47/210 (22%)
Query: 518 PLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVV 577
P PG++ V G PCQ S NRF++ + D K+ ++ + +DF +P ENV
Sbjct: 833 PKPGEIKVFTIGFPCQTHSTLNRFQD----VRDIKSNLILNALSWIDFYRPMLCYFENVA 888
Query: 578 DIVKF---------AKGL---LGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWG 625
++F +G+ + L+ M YQVR G++ A YG PQ R R FL
Sbjct: 889 GFLQFRVFHTENSDVEGIEMGGLKLLKRGLLDMGYQVREGLLQAAHYGTPQRRERFFLIA 948
Query: 626 AQPTEKLPPYALPTHDVVLRGVIPTEFERNT---------------VAYDEGQQAELARK 670
A LP PTHD P EF +NT + Y ++ + R
Sbjct: 949 ALDGTPLPALPQPTHD------FPKEFFKNTNSDVTYKTTPSTSLSIVYPNKKRIQPIRS 1002
Query: 671 ---------LLLQDAISDLPSVDNYESRDE 691
+ + DAI DLP D + RDE
Sbjct: 1003 ANGTALHPCVTIGDAIDDLPRFD-WTHRDE 1031
>gi|421716108|ref|ZP_16155420.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R037c]
gi|407222006|gb|EKE91809.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R037c]
Length = 355
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 98/207 (47%), Gaps = 37/207 (17%)
Query: 512 FKSKILPLPG--DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPK 569
K K++ L ++++I GGPPCQG S + K+ L D +N + +++IV +KP+
Sbjct: 60 IKEKVIKLAQTLEINMIIGGPPCQGFSN----KGKNLGLKDPRNFLFLEYIEIVKAIKPE 115
Query: 570 FVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPT 629
++ENV +++ AKG RL + YQ+ ++ A YG+PQ R R F+ GA
Sbjct: 116 IFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGAS-- 173
Query: 630 EKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESR 689
F+ N + E ++ + +QDAISDL + + E
Sbjct: 174 -------------------RFSFDFNLL--------EPSQSVNVQDAISDLAYLCSNEGA 206
Query: 690 DEIPYDREPETEFQCFIRLRKDGKKLW 716
E Y ++ +Q +RK+ KL+
Sbjct: 207 FESDYLNPIQSSYQAL--MRKNSPKLY 231
>gi|386750489|ref|YP_006223709.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Shi417]
gi|384556747|gb|AFH97215.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Shi417]
Length = 355
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 98/207 (47%), Gaps = 37/207 (17%)
Query: 512 FKSKILPLPG--DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPK 569
K K++ L ++++I GGPPCQG S + K+ L D +N + +++IV +KP+
Sbjct: 60 IKEKVIKLAQTLEINMIIGGPPCQGFSN----KGKNLGLKDPRNFLFLEYIEIVKAIKPE 115
Query: 570 FVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPT 629
++ENV +++ AKG +L + YQ+ ++ A YG+PQ R R F+ GA
Sbjct: 116 IFIIENVKNLISCAKGYFLEEIKEKLNALGYQLSYQILNAKDYGVPQNRERAFIVGAS-- 173
Query: 630 EKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESR 689
F+ N + E ++ + +QDAISDL + + E
Sbjct: 174 -------------------RFSFDFNLL--------EPSQSVNVQDAISDLAYLCSNEGA 206
Query: 690 DEIPYDREPETEFQCFIRLRKDGKKLW 716
E Y ++ +Q +RKD KL+
Sbjct: 207 FESDYLNPIQSSYQAL--MRKDSPKLY 231
>gi|217032842|ref|ZP_03438321.1| hypothetical protein HPB128_165g1 [Helicobacter pylori B128]
gi|298737011|ref|YP_003729541.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori B8]
gi|216945425|gb|EEC24089.1| hypothetical protein HPB128_165g1 [Helicobacter pylori B128]
gi|298356205|emb|CBI67077.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori B8]
Length = 361
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 92/194 (47%), Gaps = 35/194 (18%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+++I GGPPCQG S + K+ L D +N + +++IV +KP+ ++ENV +++
Sbjct: 73 INMIIGGPPCQGFSN----KGKNLGLKDPRNFLFLEYIEIVKAIKPEIFIIENVKNLISC 128
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
AKG RL + YQ+ ++ A YG+PQ R R F+ GA
Sbjct: 129 AKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGAS--------------- 173
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
F+ N + E ++ + +QDAISDL + + E E Y ++ +
Sbjct: 174 ------RFSFDFNLL--------EPSQSVNIQDAISDLAYLCSNEGAFESDYLNPIQSSY 219
Query: 703 QCFIRLRKDGKKLW 716
Q +RK+ KL+
Sbjct: 220 QAL--MRKNSPKLY 231
>gi|385215328|ref|YP_005775284.1| cytosine specific DNA methyltransferase [Helicobacter pylori F32]
gi|317179856|dbj|BAJ57642.1| cytosine specific DNA methyltransferase [Helicobacter pylori F32]
Length = 281
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 90/192 (46%), Gaps = 35/192 (18%)
Query: 525 VICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAK 584
+I GGPPCQG S + K+ L D +N + +++IV LKP+ ++ENV +++ AK
Sbjct: 1 MIIGGPPCQGFSN----KGKNLGLKDPRNFLFLEYIEIVKALKPEIFIIENVKNLISCAK 56
Query: 585 GLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVL 644
G RL + YQ+ ++ A YG+PQ R R F+ GA
Sbjct: 57 GYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGAS----------------- 99
Query: 645 RGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQC 704
F+ N + E ++ + +QDAISDL + + E E Y ++ +Q
Sbjct: 100 ----RFSFDFNLL--------EPSQSVNVQDAISDLAYLCSNEGAFESNYLNPIQSSYQA 147
Query: 705 FIRLRKDGKKLW 716
+RKD KL+
Sbjct: 148 L--MRKDSPKLY 157
>gi|404481780|ref|ZP_11017010.1| DNA (cytosine-5-)-methyltransferase [Clostridiales bacterium
OBRC5-5]
gi|404345084|gb|EJZ71438.1| DNA (cytosine-5-)-methyltransferase [Clostridiales bacterium
OBRC5-5]
Length = 180
Score = 75.5 bits (184), Expect = 1e-10, Method: Composition-based stats.
Identities = 41/116 (35%), Positives = 65/116 (56%), Gaps = 7/116 (6%)
Query: 512 FKSKILPLPGD--VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPK 569
+K I P+ GD +DVI GGPPCQG+S + R D+P +NK + ++ +VD ++PK
Sbjct: 60 YKENIKPIIGDANIDVIIGGPPCQGMS-LSGPRKFDDP----RNKLYLSYIRLVDEIRPK 114
Query: 570 FVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWG 625
++ENV +V G + + + M Y++ ++ A YG+PQ R RV G
Sbjct: 115 AFVIENVPGLVGLFGGQIKDSIIQKFSDMGYKIEYKILCAADYGVPQMRKRVVFVG 170
>gi|402080297|gb|EJT75442.1| modification methylase DdeI [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 1216
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 68/128 (53%), Gaps = 7/128 (5%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIV-FMDIVDFLKPKFVLMEN 575
+P G+V+ I GG PCQG S ++ + A +KN+ L+ F VDF +PK+ ++EN
Sbjct: 761 VPAKGEVEFISGGSPCQGFSLLTANKSSE---AQKKNRSLVASFASFVDFYRPKYGILEN 817
Query: 576 VVDIVKFAKGLLGRY---ALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKL 632
V +V + Y L ++ M YQ+++ + A YG PQ R RVFL A P L
Sbjct: 818 VSSMVGKSDNPGSDYFSQLLCAIVGMGYQIQIILGDAWTYGAPQSRSRVFLIFALPGCTL 877
Query: 633 PPYALPTH 640
P + +H
Sbjct: 878 PERPMMSH 885
>gi|420408038|ref|ZP_14907197.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4216]
gi|393025523|gb|EJB26629.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4216]
Length = 355
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 98/207 (47%), Gaps = 37/207 (17%)
Query: 512 FKSKILPLPG--DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPK 569
K K++ L ++++I GGPPCQG S + K+ L D +N + +++IV +KP+
Sbjct: 60 IKEKVIKLAQKLEINMIIGGPPCQGFSN----KGKNLGLKDPRNFLFLEYIEIVKAIKPE 115
Query: 570 FVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPT 629
++ENV +++ AKG RL + YQ+ ++ A YG+PQ R R F+ GA
Sbjct: 116 IFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGAS-- 173
Query: 630 EKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESR 689
F+ N + E ++ + +QDAISDL + + E
Sbjct: 174 -------------------RFSFDFNLL--------EPSQSVNVQDAISDLAYLCSNEGA 206
Query: 690 DEIPYDREPETEFQCFIRLRKDGKKLW 716
E Y ++ +Q +RK+ KL+
Sbjct: 207 FESDYLNPIQSSYQAL--MRKNSPKLY 231
>gi|113474395|ref|YP_720456.1| DNA-cytosine methyltransferase [Trichodesmium erythraeum IMS101]
gi|110165443|gb|ABG49983.1| DNA-cytosine methyltransferase [Trichodesmium erythraeum IMS101]
Length = 421
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 83/173 (47%), Gaps = 30/173 (17%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
++DVI GGPPCQG S + L D +N + F+ IV LKPK+ ++ENV +
Sbjct: 73 EIDVIFGGPPCQGFSQIGK-----RALDDPRNALISHFLRIVLELKPKYFVIENVKGLTV 127
Query: 582 FAKGLLGRYALARLIQMNYQVRM--GMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPT 639
+ + +L + +YQ+++ ++ A YG+PQ R R+F+ G + KLP Y
Sbjct: 128 GKHQIFLEEVINKLSKNSYQLQLPYQVLNAANYGVPQHRERLFILGCKKGLKLPNYP--- 184
Query: 640 HDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEI 692
+ + + AY + + DAI DLP V+NY EI
Sbjct: 185 ---------QIQIHKKSEAY-----------INVWDAIGDLPEVENYPELLEI 217
>gi|347726866|gb|AEP19811.1| C5 cytosine DNA methyltransferase [Helicobacter pylori]
Length = 355
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 92/195 (47%), Gaps = 35/195 (17%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
++++I GGPPCQG S + K+ L D +N + +++IV +KP+ ++ENV +++
Sbjct: 72 EINMIIGGPPCQGFSN----KGKNLGLKDPRNFLFLEYIEIVRAIKPEIFIIENVKNLIS 127
Query: 582 FAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHD 641
AKG R + YQ+ ++ A YG+PQ R R F+ GA
Sbjct: 128 CAKGYFLEEIKERFKALGYQLSYQILNAKDYGVPQNRERAFIVGAS-------------- 173
Query: 642 VVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETE 701
F+ N + E ++ + +QDAISDL + + E E Y ++
Sbjct: 174 -------RFSFDFNLL--------EPSQSVNVQDAISDLAYLCSNEGAFESDYLNPIQSS 218
Query: 702 FQCFIRLRKDGKKLW 716
+Q +RKD KL+
Sbjct: 219 YQAL--MRKDSPKLY 231
>gi|108562472|ref|YP_626788.1| cytosine specific DNA methyltransferase [Helicobacter pylori HPAG1]
gi|107836245|gb|ABF84114.1| cytosine specific DNA methyltransferase [Helicobacter pylori HPAG1]
Length = 355
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 99/206 (48%), Gaps = 37/206 (17%)
Query: 513 KSKILPLPG--DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKF 570
K K++ L ++++I GGPPCQG S + K+ L D +N + +++IV +KP+
Sbjct: 61 KEKVIKLAKKLEINMIIGGPPCQGFSN----KGKNLGLKDPRNFLFLEYIEIVKAIKPEI 116
Query: 571 VLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTE 630
++ENV +++ AKG RL + YQ+ ++ A YG+PQ R R F+ GA
Sbjct: 117 FIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGA---- 172
Query: 631 KLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRD 690
+ ++D + E ++ + +QDAISDL + + E
Sbjct: 173 ------------------------SRFSFD-FKLLEPSQSVNVQDAISDLAYLCSNEGAF 207
Query: 691 EIPYDREPETEFQCFIRLRKDGKKLW 716
E Y ++ +Q +RK+ KL+
Sbjct: 208 ESDYLNHIQSSYQAL--MRKNSPKLY 231
>gi|420398114|ref|ZP_14897327.1| cytosine-specific methyltransferase [Helicobacter pylori CPY1962]
gi|393014788|gb|EJB15959.1| cytosine-specific methyltransferase [Helicobacter pylori CPY1962]
Length = 281
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 90/192 (46%), Gaps = 35/192 (18%)
Query: 525 VICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAK 584
+I GGPPCQG S + K+ L D +N + +++IV LKP+ ++ENV +++ AK
Sbjct: 1 MIIGGPPCQGFSN----KGKNLGLKDPRNFLFLEYIEIVKALKPEIFIIENVKNLISCAK 56
Query: 585 GLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVL 644
G RL + YQ+ ++ A YG+PQ R R F+ GA
Sbjct: 57 GYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGAS----------------- 99
Query: 645 RGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQC 704
F+ N + E ++ + +QDAISDL + + E E Y ++ +Q
Sbjct: 100 ----RFSFDFNLL--------EPSQSVNVQDAISDLAYLCSNEGAFESDYLNPIQSSYQA 147
Query: 705 FIRLRKDGKKLW 716
+RKD KL+
Sbjct: 148 L--MRKDSPKLY 157
>gi|384921047|ref|ZP_10021038.1| DNA-cytosine methyltransferase [Citreicella sp. 357]
gi|384465060|gb|EIE49614.1| DNA-cytosine methyltransferase [Citreicella sp. 357]
Length = 374
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 88/186 (47%), Gaps = 28/186 (15%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
++D + GGPPCQG S +N R + DE++ ++ IV+ L PK+++MENV I+
Sbjct: 68 ELDCLAGGPPCQGYSVYNHQRG----MHDERSHLFKEYLRIVEGLMPKWLVMENVTGIMS 123
Query: 582 FAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHD 641
+G + LA + + Y V ++ A YG+PQ R RV G +
Sbjct: 124 AGEGEAFQAVLAGIRGLGYDVEAKILRAEDYGVPQERRRVVFIGNRIGS----------- 172
Query: 642 VVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETE 701
P + + T + EG L ++DA+SDLP + N E + Y P +E
Sbjct: 173 -------PIIWPQKT--HGEG----LKPFTTIKDALSDLPELLNGEDKGVGKYKTRPTSE 219
Query: 702 FQCFIR 707
+Q +R
Sbjct: 220 YQRELR 225
>gi|328857943|gb|EGG07057.1| hypothetical protein MELLADRAFT_85954 [Melampsora larici-populina
98AG31]
Length = 883
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 76/181 (41%), Gaps = 24/181 (13%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP PGD D+I G PC S N R + D KN + ++FLKP +V ENV
Sbjct: 446 LPKPGDFDIITAGFPCGSHSTLNVLRKGE----DSKNALCGTALSFIEFLKPTYVYFENV 501
Query: 577 VDIVK----------FAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGA 626
++K R +I ++YQ+R G++ A YG PQ R R L
Sbjct: 502 RGLLKTQLVDRETQEILTHAFLRLMCGTMITLDYQLRFGVLQAAQYGTPQERRRFILTAV 561
Query: 627 QPTEKLPPYALPTH---DVVLRGVIPTE---FERNTVAYDEGQQAELARKLLLQDAISDL 680
+ LP PTH D L+ +P + F Y G + + D ISDL
Sbjct: 562 KRGYTLPNLPDPTHFYPDGNLQIKLPDQNKIFMDFRTRYSRGTLDPIT----IGDTISDL 617
Query: 681 P 681
P
Sbjct: 618 P 618
>gi|386749158|ref|YP_006222365.1| cytosine specific DNA methyltransferase [Helicobacter cetorum MIT
00-7128]
gi|384555401|gb|AFI03735.1| cytosine specific DNA methyltransferase [Helicobacter cetorum MIT
00-7128]
Length = 355
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 94/194 (48%), Gaps = 35/194 (18%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+++I GGPPCQG S + K+ L D +N + ++DIV +KP+ ++ENV +++
Sbjct: 73 INMIIGGPPCQGFSN----KGKNLGLKDPRNFLFLEYIDIVKAIKPQIFIIENVKNLISC 128
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
AKG + + + YQ+ ++ A YG+PQ R R F+ GA+
Sbjct: 129 AKGYFLKEIKEKFNILGYQLSYHILNARDYGVPQSRERAFIVGAR--------------- 173
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
F+ N + E + + +++AISDL +++ E E Y + ++ +
Sbjct: 174 ------YFNFDFNLL--------EPLQIVSVKEAISDLAYLNSNEGAFESDYSKPIQSTY 219
Query: 703 QCFIRLRKDGKKLW 716
Q +RK+ KL+
Sbjct: 220 QAL--MRKNSNKLY 231
>gi|109638476|ref|YP_656741.1| ORF86 [Ranid herpesvirus 1]
gi|4219046|gb|AAD12284.1| ORF86 [Ranid herpesvirus 1]
Length = 739
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 71/142 (50%), Gaps = 4/142 (2%)
Query: 498 SNCGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLI 557
++ G + G S P G+V+ + GGPPCQG S NRF + + KN +
Sbjct: 326 ADVGVALHALQESGTMSHPWPAVGEVECMVGGPPCQGYSILNRFPHAHS--TKAKNTLVN 383
Query: 558 VFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQF 617
+++ + + KP ++MENV ++ + KG + + L Y V + ++ AG YG+PQ
Sbjct: 384 LYIALALYYKPAVLIMENVRNLTAYKKGRVLCGVVEMLRGGGYDVMLNILQAGHYGVPQT 443
Query: 618 RMRVFLWGAQPTE--KLPPYAL 637
R RV + P + PP AL
Sbjct: 444 RQRVIVVATLPNALPEGPPPAL 465
>gi|421711053|ref|ZP_16150397.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R030b]
gi|407213258|gb|EKE83116.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R030b]
Length = 355
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 92/194 (47%), Gaps = 35/194 (18%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+++I GGPPCQG S + K+ L D +N + +++IV +KP+ ++ENV +++
Sbjct: 73 INMIIGGPPCQGFSN----KGKNLGLKDPRNFLFLEYIEIVKAIKPEIFIIENVKNLISC 128
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
AKG RL + YQ+ ++ A YG+PQ R R F+ GA
Sbjct: 129 AKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGAS--------------- 173
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
F+ N + E ++ + +Q+AISDL + + E E Y ++ +
Sbjct: 174 ------RFSFDFNLL--------EPSQSVSVQEAISDLAYLCSNEGAFESDYLNPIQSNY 219
Query: 703 QCFIRLRKDGKKLW 716
Q +RKD KL+
Sbjct: 220 QAL--MRKDSPKLY 231
>gi|384892053|ref|YP_005766146.1| cytosine specific DNA methyltransferase [Helicobacter pylori Cuz20]
gi|308061350|gb|ADO03238.1| cytosine specific DNA methyltransferase [Helicobacter pylori Cuz20]
Length = 355
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 92/194 (47%), Gaps = 35/194 (18%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+++I GGPPCQG S + K+ L D +N + +++IV +KP+ ++ENV +++
Sbjct: 73 INMIIGGPPCQGFSN----KGKNLGLKDPRNFLFLEYIEIVKAIKPEIFIIENVKNLISC 128
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
AKG +L + YQ+ ++ A YG+PQ R R F+ GA
Sbjct: 129 AKGYFLEEIKEKLNALGYQLSYQILNAKDYGVPQNRERAFIVGAS--------------- 173
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
F+ N + E ++ + +QDAISDL + + E E Y ++ +
Sbjct: 174 ------RFSFDFNLL--------EPSQSVNVQDAISDLAYLCSNEGAFESDYLNPIQSSY 219
Query: 703 QCFIRLRKDGKKLW 716
Q +RKD KL+
Sbjct: 220 QAL--MRKDSPKLY 231
>gi|110643908|ref|YP_671638.1| type II 5-cytosoine methyltransferase [Escherichia coli 536]
gi|110345500|gb|ABG71737.1| putative type II 5-cytosoine methyltransferase [Escherichia coli
536]
Length = 315
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 61/120 (50%), Gaps = 5/120 (4%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
D DV+ GG PCQG S N RNKD DE+N+ + F+ +V+ KPKF ENV I+
Sbjct: 62 DCDVVIGGFPCQGFSQANLLRNKD----DERNQLYLEFLRVVNAKKPKFFFAENVRGILS 117
Query: 582 FAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLP-PYALPTH 640
G + + Y+V+ + YG+PQ R RV + G + K+ Y PTH
Sbjct: 118 LDNGTAIEKIESDFKSLGYKVKKQLFNVADYGVPQMRYRVIIVGVRDDIKVEYIYPQPTH 177
>gi|421713626|ref|ZP_16152957.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R32b]
gi|407216992|gb|EKE86829.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R32b]
Length = 355
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 97/207 (46%), Gaps = 37/207 (17%)
Query: 512 FKSKILPLPG--DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPK 569
K K++ L ++++I GGPPCQG S + K+ L D +N + +++IV +KP+
Sbjct: 60 IKEKVIKLAKKLEINMIIGGPPCQGFSN----KGKNLGLKDPRNFLFLEYIEIVKAIKPE 115
Query: 570 FVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPT 629
++ENV +++ AKG RL + YQ+ + A YG+PQ R R F+ GA
Sbjct: 116 IFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQTLNAKDYGVPQNRERAFIVGAS-- 173
Query: 630 EKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESR 689
F+ N + E ++ + +QDAISDL + + E
Sbjct: 174 -------------------RFSFDFNLL--------EPSQSVNVQDAISDLAYLCSNEGA 206
Query: 690 DEIPYDREPETEFQCFIRLRKDGKKLW 716
E Y ++ +Q +RK+ KL+
Sbjct: 207 FESDYLNPIQSSYQAL--MRKNSPKLY 231
>gi|341868929|gb|AEK98588.1| domain rearranged methyltransferase 1 [Vitis amurensis]
Length = 137
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LPLPG VD I GGPPCQG SG NRF + + + + ++ F+ D+ +P+F L+ENV
Sbjct: 60 LPLPGQVDFINGGPPCQGFSGMNRF--NQSTWSKVQCEMILAFLSFADYFRPRFFLLENV 117
Query: 577 VDIVKFAKGLLGRYALARLI 596
+ V F KG R +A L+
Sbjct: 118 RNFVSFNKGQTFRLTVALLL 137
>gi|428319250|ref|YP_007117132.1| DNA-cytosine methyltransferase [Oscillatoria nigro-viridis PCC
7112]
gi|428242930|gb|AFZ08716.1| DNA-cytosine methyltransferase [Oscillatoria nigro-viridis PCC
7112]
Length = 420
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
++DV+ G PCQG S + R+ D+P +N + F +V LKPKF +MENV I
Sbjct: 78 EIDVVISGSPCQGFSMMGK-RDVDDP----RNSLIFHFQRLVLELKPKFFVMENVPGIAS 132
Query: 582 FAKGLLGRYALARLIQMNYQV--RMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPT 639
L ++ ++ Y+V ++ A YG+PQ R R+FL G + +LP Y P
Sbjct: 133 GEHKELLNILISSFLKCGYKVEENYQVLNAVNYGVPQARKRLFLIGCKEGYELPKY--PQ 190
Query: 640 HDVVLRGV-IPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNY 686
+L + IP +++ L + DAI DLP VDNY
Sbjct: 191 QTTILPKIKIPKRYKK----------INLPAVPTVWDAIGDLPDVDNY 228
>gi|311977244|gb|ADQ20500.1| M1.BfuAI [Lysinibacillus fusiformis]
Length = 357
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 66/125 (52%), Gaps = 6/125 (4%)
Query: 521 GDVDVICGGPPCQGVSGFN--RFRNKD--NPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
++D++ GGPPCQG S F RF N NP D++NK + F+ +V LKPK+ MENV
Sbjct: 69 SEIDLVVGGPPCQGFSVFGKRRFINTQGYNPKEDDRNKLVYEFIRVVRELKPKYFFMENV 128
Query: 577 VDIVKFAKGLLGRYALARLIQMNY-QVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPY 635
+ KGL + + Y ++ + A YG+PQ R R+ + G + + + +
Sbjct: 129 KGFLSLDKGLFVEEVIKEFKSLGYDKIEYKVFCAADYGVPQKRYRMLMIGNRLGQDI-IF 187
Query: 636 ALPTH 640
PTH
Sbjct: 188 PEPTH 192
>gi|313667088|gb|ADR72987.1| M2.BsmFI [Geobacillus stearothermophilus]
Length = 365
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 96/188 (51%), Gaps = 33/188 (17%)
Query: 524 DVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFA 583
DV+ GGPPCQ S + R+ D E+ + + ++ I++ ++PK + ENVV + K A
Sbjct: 65 DVVIGGPPCQSFSLVGKRRSDD-----ERGQLVWQYLRIINEIRPKCFVFENVVGL-KSA 118
Query: 584 KGLLGRYALARLI----QMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPT 639
K G L LI ++ Y+V+ ++ A YG+PQ R R+F+ G + K + LPT
Sbjct: 119 KTAEGNLVLDELIIAFREIGYEVQWSVLNAADYGVPQRRKRIFIVGTREGVKF-NFPLPT 177
Query: 640 HDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPE 699
H+ ++G +L + + +++A+ DLPS + + + Y +EP
Sbjct: 178 HN------------------EKGDDGKL-KWISVEEALGDLPSPN---TDGIVKYSKEPL 215
Query: 700 TEFQCFIR 707
T +Q +R
Sbjct: 216 TPYQLKMR 223
>gi|46138503|ref|XP_390942.1| hypothetical protein FG10766.1 [Gibberella zeae PH-1]
Length = 1343
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 72/144 (50%), Gaps = 9/144 (6%)
Query: 502 EKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIV-FM 560
+ ++ F G ++ +P GDVD I GG PC GF+ N +A KN+ L+ F
Sbjct: 865 DDMQRFAIQGKFAENVPPVGDVDFISGGSPC---PGFSLLTNDKTTVAQRKNQSLVAAFG 921
Query: 561 DIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLI----QMNYQVRMGMMAAGAYGLPQ 616
+D +P++ L+ENV I++ +K + ++LI + YQ + + A + G PQ
Sbjct: 922 SFIDLYRPRYGLLENVPGIIQ-SKATRDQDVFSQLICAIVGLGYQTQFSFLDASSCGSPQ 980
Query: 617 FRMRVFLWGAQPTEKLPPYALPTH 640
R RVF+ A P LP TH
Sbjct: 981 RRSRVFVVFAAPGHHLPQRPHITH 1004
>gi|156549014|ref|XP_001607336.1| PREDICTED: DNA (cytosine-5)-methyltransferase PliMCI [Nasonia
vitripennis]
Length = 1682
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 84/202 (41%), Gaps = 24/202 (11%)
Query: 515 KILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLME 574
K+LP DV+ +C PC+ + K+ + F+ D+ KP ++E
Sbjct: 1296 KLLPRKDDVEFLCATLPCENYKTMTD-------ITVFKHSYIATFLSYCDYYKPSLFILE 1348
Query: 575 NVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPP 634
++K + + + LA L+ M YQV +M G YG PQ R R L GA P LP
Sbjct: 1349 ADEKLIK--RSFVLKLTLACLVSMGYQVTFDLMQVGCYGAPQNRRRSVLLGAAPDSVLPK 1406
Query: 635 YALPTHDVVLRGVIPTEFERNTVAYDEGQQAELA--------RKLLLQDAISDLPSVDNY 686
+ H V P + D + + R + +QDA+ DLP+
Sbjct: 1407 FPERLH------VFPKPLCELGIVIDSKKYTQDTFWTESAPYRSVTVQDALIDLPTT-KV 1459
Query: 687 ESRDEIPYDREPETEFQCFIRL 708
+E+ YD + + F +RL
Sbjct: 1460 AITEEMNYDAKSTSLFSKIMRL 1481
>gi|217034606|ref|ZP_03440014.1| hypothetical protein HP9810_903g31 [Helicobacter pylori 98-10]
gi|216942961|gb|EEC22446.1| hypothetical protein HP9810_903g31 [Helicobacter pylori 98-10]
Length = 281
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 89/192 (46%), Gaps = 35/192 (18%)
Query: 525 VICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAK 584
+I GG PCQG S + K+ L D +N + +++IV LKPK ++ENV +++ AK
Sbjct: 1 MIIGGSPCQGFSN----KGKNLGLKDPRNFLFLEYIEIVKALKPKIFIIENVKNLISCAK 56
Query: 585 GLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVL 644
G RL + YQ+ ++ A YG+PQ R R F+ GA
Sbjct: 57 GYFLEEIKKRLNALGYQLSYQILNAKDYGVPQNRERAFIVGAS----------------- 99
Query: 645 RGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQC 704
F+ N + E ++ + +QDAISDL + + E E Y ++ +Q
Sbjct: 100 ----RFSFDFNLL--------EPSQSVNVQDAISDLAYLCSNEGAFESDYLNPIQSSYQA 147
Query: 705 FIRLRKDGKKLW 716
+RKD KL+
Sbjct: 148 L--MRKDSPKLY 157
>gi|440475172|gb|ELQ43873.1| modification methylase DdeI [Magnaporthe oryzae Y34]
gi|440487101|gb|ELQ66907.1| modification methylase DdeI [Magnaporthe oryzae P131]
Length = 1289
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 87/175 (49%), Gaps = 13/175 (7%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIV-FMDIVDFLKPKFVLMEN 575
+P G+V+ I GG PCQG S ++ D + KN+ L+ F VDF +PK+ L+EN
Sbjct: 820 VPSRGEVEFISGGSPCQGFSLLTVNKSDDRQV---KNRSLVASFASFVDFYRPKYGLLEN 876
Query: 576 VVDIVKFAKGLLGRYA---LARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKL 632
V ++V Y L+ + YQV++ + A +YG PQ R R+FL A+ +L
Sbjct: 877 VTNMVNANVRPDCDYLSQLFCALVGLGYQVQIILGDAWSYGAPQQRSRIFLSFARADFQL 936
Query: 633 PPYALPTHDVVLRGVIPTE---FERNTVAYDEGQQAELA-RKLLLQDAISDLPSV 683
P +PT IP+ + N + E Q + A R + +AI DLP +
Sbjct: 937 P--QIPTRSHSHTAAIPSRAIGYLNNGERFVERQFSSTAFRYVTSGEAIDDLPKI 989
>gi|420399493|ref|ZP_14898698.1| cytosine-specific methyltransferase [Helicobacter pylori CPY3281]
gi|393019642|gb|EJB20783.1| cytosine-specific methyltransferase [Helicobacter pylori CPY3281]
Length = 281
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 90/192 (46%), Gaps = 35/192 (18%)
Query: 525 VICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAK 584
+I GGPPCQG S + K+ L D +N + +++IV LKP+ +++NV +++ AK
Sbjct: 1 MIIGGPPCQGFSN----KGKNLGLKDSRNFLFLEYIEIVKALKPEIFIIKNVKNLISCAK 56
Query: 585 GLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVL 644
G RL + YQ+ ++ A YG+PQ R R F+ GA
Sbjct: 57 GYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGAS----------------- 99
Query: 645 RGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQC 704
F+ N + E ++ + +QDAISDL + + E E Y ++ +Q
Sbjct: 100 ----RFSFDFNLL--------EPSQSVNVQDAISDLAYLCSNEGAFESDYLNPIQSSYQA 147
Query: 705 FIRLRKDGKKLW 716
+RKD KL+
Sbjct: 148 L--MRKDSPKLY 157
>gi|389640887|ref|XP_003718076.1| modification methylase DdeI [Magnaporthe oryzae 70-15]
gi|351640629|gb|EHA48492.1| modification methylase DdeI [Magnaporthe oryzae 70-15]
Length = 1294
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 88/177 (49%), Gaps = 13/177 (7%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIV-FMDIVDFLKPKFVLMEN 575
+P G+V+ I GG PCQG S ++ D + KN+ L+ F VDF +PK+ L+EN
Sbjct: 825 VPSRGEVEFISGGSPCQGFSLLTVNKSDDRQV---KNRSLVASFASFVDFYRPKYGLLEN 881
Query: 576 VVDIVKFAKGLLGRYA---LARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKL 632
V ++V Y L+ + YQV++ + A +YG PQ R R+FL A+ +L
Sbjct: 882 VTNMVNANVRPDCDYLSQLFCALVGLGYQVQIILGDAWSYGAPQQRSRIFLSFARADFQL 941
Query: 633 PPYALPTHDVVLRGVIPTE---FERNTVAYDEGQQAELA-RKLLLQDAISDLPSVDN 685
P +PT IP+ + N + E Q + A R + +AI DLP + +
Sbjct: 942 P--QIPTRSHSHTAAIPSRAIGYLNNGERFVERQFSSTAFRYVTSGEAIDDLPKIGD 996
>gi|449547195|gb|EMD38163.1| hypothetical protein CERSUDRAFT_122915 [Ceriporiopsis subvermispora
B]
Length = 1081
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 65/138 (47%), Gaps = 18/138 (13%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP PG+VD I GGPPCQ S N + D D ++ + + V+ +P + L+ENV
Sbjct: 665 LPKPGEVDFIFGGPPCQSFSLMNHSKKAD----DIRSTLVCNMLSWVELYRPSYFLIENV 720
Query: 577 V--------------DIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVF 622
+ +V K + ++ + + YQ+ ++ AG YG PQ R R+
Sbjct: 721 IGMLFHPLGGEQSGRSVVGGVKMGMVKFIVRAATALGYQIHFRVLQAGQYGAPQGRRRLI 780
Query: 623 LWGAQPTEKLPPYALPTH 640
GA+ LP + P+H
Sbjct: 781 FIGARRDLPLPQFPAPSH 798
Score = 45.8 bits (107), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 100/243 (41%), Gaps = 24/243 (9%)
Query: 173 QAKCHYMWAEVDGHIT-----YDLFDDAHVKAESGEEDYICKIVEM--FEAVDGTPYFTA 225
Q + + ++E DG I+ Y + D +++ +S EE Y+ +I E+ E P A
Sbjct: 403 QERSMWKFSEDDGSISQHGVDYHISDFVYLRVKS-EEAYLYQIAEIVNIEPGGSLPIVEA 461
Query: 226 QWYYRARDTVI------ESNAHLIDQRRVFFSEIQNDNPLECLVKKLNIARVPLNIDLEA 279
Y R D ++ E+ + D RR+F + + K+ + +L+
Sbjct: 462 SLYGRY-DLILRDLKGNEAWSLPKDNRRLFATPTITRVEASAIEGKVYVKPCRTKSELDE 520
Query: 280 KKLAIPHCDYYCDMMYLLPYSTFFSLPPENKRVSSETSSTISSDVDANECEVGE--PQKM 337
A H YY D+ P T + + D+ E Q+
Sbjct: 521 WLQADDH--YYVDLWAQSPRVTSLKALMNLDYTCTRSCPQCLHAHDSERAEAKRFLNQRG 578
Query: 338 DVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAE 397
++ LDL+SG G +STGL ++ T+WAV+ + A S + NHP+T V N+
Sbjct: 579 PLRALDLFSGAGGLSTGLNCSDSVN-----TKWAVEFSPSAALSYQANHPDTIVYNQCTN 633
Query: 398 DFL 400
L
Sbjct: 634 LLL 636
>gi|418630145|ref|ZP_13192633.1| DNA (cytosine-5-)-methyltransferase [Staphylococcus epidermidis
VCU127]
gi|374831827|gb|EHR95553.1| DNA (cytosine-5-)-methyltransferase [Staphylococcus epidermidis
VCU127]
Length = 329
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 81/171 (47%), Gaps = 33/171 (19%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
VDVI GGPPCQG S +F + D +N+ ++ V LKPK ++ENV +V
Sbjct: 71 VDVIIGGPPCQGFSLAGKFGR--TFIDDPRNQLFKEYLRFVSILKPKIFIIENVARLVSH 128
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG R + ++ YQV+ ++ Y +PQ R RVF+ G + E
Sbjct: 129 NKGKTIREIQDSIKKLGYQVKYEILQTSDYNIPQKRQRVFIVGYKNIE------------ 176
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIP 693
Y E +L RK+ +++AISDLP +++ E + +IP
Sbjct: 177 --------------FNYPE----KLKRKVTIKEAISDLPPLNSGE-KSKIP 208
>gi|313677760|ref|YP_004055756.1| DNA-cytosine methyltransferase [Marivirga tractuosa DSM 4126]
gi|312944458|gb|ADR23648.1| DNA-cytosine methyltransferase [Marivirga tractuosa DSM 4126]
Length = 346
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 38/197 (19%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
+VD+I GGPPCQG S + + DE+N+ F+ VD+ KPK +MENV +I+
Sbjct: 72 NVDLIVGGPPCQGFSIAGK-----RIIDDERNQLYKSFLRFVDYFKPKGFVMENVPNILS 126
Query: 582 FAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHD 641
G + L + Y++ + A + +PQ R R F G
Sbjct: 127 MGNGAVKSQILKDFKDIGYKINYNKLLASDFAVPQNRRRAFFVGL--------------- 171
Query: 642 VVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETE 701
+N++ ++ + K+ ++AISDLP D+ E D Y P++
Sbjct: 172 ------------KNSLEFEFPKPITTDNKITSEEAISDLPK-DSLE--DGCQYTINPKSV 216
Query: 702 FQCFIRLRKDGKKLWFN 718
FQ R ++G K+ FN
Sbjct: 217 FQ---REMRNGNKVVFN 230
>gi|413915570|emb|CCM44166.1| DNA-cytosine methyltransferase [Staphylococcus xylosus]
Length = 348
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 84/187 (44%), Gaps = 31/187 (16%)
Query: 521 GDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIV 580
G +D I GGPPCQG S R+ ++P +N I ++ V +KPKF ++ENV ++
Sbjct: 66 GSIDGIIGGPPCQGFSLVGT-RDTNDP----RNSLYIEYVRFVSVIKPKFFVLENVSGLL 120
Query: 581 KFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTH 640
KG + R + Y V ++ A YG+PQ R RVF G +
Sbjct: 121 SLEKGKFKDDIIKRFEGLGYNVDYKLLTASDYGVPQSRKRVFFVGLR------------K 168
Query: 641 DVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPET 700
DV F+ +D EL + A+SDLP + S+ + Y PE
Sbjct: 169 DV---------FKDEYFNFD---NLELEEMVSTSKALSDLPQATS--SKIGLDYINPPEN 214
Query: 701 EFQCFIR 707
++Q ++R
Sbjct: 215 KYQKYMR 221
>gi|308182232|ref|YP_003926359.1| cytosine specific DNA methyltransferase [Helicobacter pylori
PeCan4]
gi|308064417|gb|ADO06309.1| cytosine specific DNA methyltransferase [Helicobacter pylori
PeCan4]
Length = 281
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 90/192 (46%), Gaps = 35/192 (18%)
Query: 525 VICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAK 584
+I GGPPCQG S + K+ L D +N + +++IV LKP+ ++ENV +++ AK
Sbjct: 1 MIIGGPPCQGFSN----KGKNLGLKDPRNFLFLEYIEIVKALKPEIFIIENVKNLISCAK 56
Query: 585 GLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVL 644
G RL + YQ+ ++ A YG+PQ R R F+ GA
Sbjct: 57 GYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGAS----------------- 99
Query: 645 RGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQC 704
F+ N + E ++ + +QDAISDL + + E E Y ++ +Q
Sbjct: 100 ----RFSFDFNLL--------EPSQSVNVQDAISDLAYLCSNEGAFESDYLNPIQSSYQA 147
Query: 705 FIRLRKDGKKLW 716
+RK+ KL+
Sbjct: 148 L--MRKNSPKLY 157
>gi|119483468|ref|ZP_01618882.1| site-specific DNA-methyltransferase [Lyngbya sp. PCC 8106]
gi|119458235|gb|EAW39357.1| site-specific DNA-methyltransferase [Lyngbya sp. PCC 8106]
Length = 407
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 94/196 (47%), Gaps = 21/196 (10%)
Query: 524 DVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF- 582
+VI GGPPCQG F+ R D +N F+ +P +LMENV ++ K
Sbjct: 74 NVIIGGPPCQG---FSVCRQGRGDAKDPRNTLFQEFIRFGSIFEPDLMLMENVPNLAKIK 130
Query: 583 AKGLLGRYALAR--LIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTH 640
K + + LI++ Y V ++ A YG+PQ R R+F+ ++ + P+ TH
Sbjct: 131 TKSDQAVIDIIKDELIKLGYHVDYSVLNATDYGIPQNRRRLFIVASK-VKITHPFPPSTH 189
Query: 641 DVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPET 700
+ + + F N+ L L DAISDLP ++ E ++I Y + PET
Sbjct: 190 TIASQSQL--SFWENS----------LLPCPTLWDAISDLPILEAGEGAEKISYSKPPET 237
Query: 701 EFQCFIRLRKDGKKLW 716
++Q RLR + K L+
Sbjct: 238 DYQK--RLRGNCKLLY 251
Score = 42.4 bits (98), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 34/52 (65%), Gaps = 6/52 (11%)
Query: 340 KLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEV 391
K+LD+++G G G LG +AG LV ++I+++A ++L NHPET++
Sbjct: 6 KVLDIFAGAG----GFSLGFKMAGGTLVG--GIEIDQWAGETLAYNHPETQI 51
>gi|448677074|ref|ZP_21688568.1| MHphi(C) [Haloarcula argentinensis DSM 12282]
gi|445774722|gb|EMA25737.1| MHphi(C) [Haloarcula argentinensis DSM 12282]
Length = 379
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 66/114 (57%), Gaps = 6/114 (5%)
Query: 522 DVDVICGGPPCQGVSGFN-RFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIV 580
+VD++ GGPPC+G S N R + ++PL N+ F++IV + P+ VL+ENV ++
Sbjct: 79 NVDLVIGGPPCRGFSMANVRSDSAEHPL----NELPARFLEIVQEINPEAVLIENVPRLL 134
Query: 581 KFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTE-KLP 633
A G +ARL +M Y G++ A +G+PQ R RVF G + E +LP
Sbjct: 135 TIADGKFKESIIARLEEMGYSTTHGVLEAEKFGVPQKRRRVFFIGHKSVEPELP 188
>gi|311977245|gb|ADQ20501.1| M2.BfuAI [Lysinibacillus fusiformis]
Length = 342
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 69/123 (56%), Gaps = 6/123 (4%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDN----PLADEKNKQLIVFMDIVDFLKPKFVLMENVV 577
++DV+ GGPPCQG S + R N DE+NK ++ ++ I++ LKPK+ ++ENV
Sbjct: 68 EIDVLIGGPPCQGFSTIGK-RVSSNFERRTAEDERNKLILEYIRILNQLKPKYFVIENVK 126
Query: 578 DIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYAL 637
++ KG + L + Y ++ ++ YG+PQ R RVF+ G + ++ + L
Sbjct: 127 GLLTMDKGDFIKGVYKELDKTGYDYKLKLLNMADYGVPQLRERVFIIGNRLGHEV-NFPL 185
Query: 638 PTH 640
PTH
Sbjct: 186 PTH 188
>gi|119513855|ref|ZP_01632813.1| DNA methylase, C-5 cytosine-specific family protein [Nodularia
spumigena CCY9414]
gi|119461493|gb|EAW42572.1| DNA methylase, C-5 cytosine-specific family protein [Nodularia
spumigena CCY9414]
Length = 318
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 90/191 (47%), Gaps = 17/191 (8%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNP-----LADEKNKQLIVFMDIVDFLKPKFVLMENV 576
++ V+ GGPPCQG S ++ P L D +N+ F++ V+ +P + ++ENV
Sbjct: 72 ELTVLIGGPPCQGFS-------RNTPAGYRYLNDSRNQLYRTFLEFVEEFRPLYAVIENV 124
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+I+K G++ +L + Y+V + A YG+PQ R R F + P
Sbjct: 125 PEILKAYNGVVREEITKQLESLGYKVISSSLNAAHYGIPQTRSRAFFLASLDNSLHFPE- 183
Query: 637 LPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDR 696
PT+ +R T N + E + L + ++DAI DLP +D + E Y
Sbjct: 184 -PTNFGDIRSDYRTMKSCNQLNLLEANFSPL---VTVRDAIGDLPPLDAGQDYGEEVYPD 239
Query: 697 EPETEFQCFIR 707
P+T +Q IR
Sbjct: 240 APQTTYQAMIR 250
>gi|420461335|ref|ZP_14960126.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-3]
gi|393081851|gb|EJB82569.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-3]
Length = 355
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 98/208 (47%), Gaps = 37/208 (17%)
Query: 511 GFKSKILPLPG--DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKP 568
K K++ L ++++I GGPPCQG S + K+ L D +N + +++IV +KP
Sbjct: 59 AIKEKVIKLAQKLEINMIIGGPPCQGFSN----KGKNLGLKDPRNFLFLEYIEIVKAIKP 114
Query: 569 KFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQP 628
+ ++ENV +++ AKG RL + YQ+ ++ A YG+PQ R R F+ GA
Sbjct: 115 EIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGAS- 173
Query: 629 TEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYES 688
F+ N + E ++ + +Q+AISDL + + E
Sbjct: 174 --------------------RFSFDFNLL--------EPSQSVNVQEAISDLAYLCSNEG 205
Query: 689 RDEIPYDREPETEFQCFIRLRKDGKKLW 716
E Y ++ +Q +RK+ KL+
Sbjct: 206 AFESDYLNPIQSSYQAL--MRKNSPKLY 231
>gi|260890952|ref|ZP_05902215.1| modification methylase NgoFVII [Leptotrichia hofstadii F0254]
gi|260859505|gb|EEX74005.1| modification methylase NgoFVII [Leptotrichia hofstadii F0254]
Length = 452
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 84/173 (48%), Gaps = 13/173 (7%)
Query: 514 SKILPLP-GDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVL 572
SK +PL G+VD+I GG PCQG S NK+ + D++N + I+ KPKF +
Sbjct: 64 SKEIPLKKGEVDLIIGGFPCQGFS----IANKNRSMEDKRNFLYKEMLRIIKDKKPKFFI 119
Query: 573 MENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKL 632
ENV I+ G + + L + Y+V + ++ A YG+PQ R RV + G + K
Sbjct: 120 AENVKGILSLHNGEVIKMILKDFEDLGYKVDVKLLNAADYGVPQQRERVIIMGNRLGLK- 178
Query: 633 PPYALPTHDVVLRGVIPTEFERNTVAYDEGQQA-ELARKLLLQDAISDLPSVD 684
PY TH + G E N + +DE + L + ++ I L +D
Sbjct: 179 NPYPKKTHADLFPG------EENYLLFDEKLKGTNLKPYITVEQTIGFLSEID 225
>gi|123965679|ref|YP_001010760.1| DNA-cytosine methyltransferase [Prochlorococcus marinus str. MIT
9515]
gi|123200045|gb|ABM71653.1| DNA-cytosine methyltransferase [Prochlorococcus marinus str. MIT
9515]
Length = 689
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 94/197 (47%), Gaps = 34/197 (17%)
Query: 521 GDVDVICGGPPCQGVSGFNRFRNKDNPLA------DEKNKQLI-VFMDIVDFLKPKFVLM 573
G++ +I GGPPCQ S ++R + ++ +E ++L F+ IV+ +KPK LM
Sbjct: 119 GEISLIAGGPPCQPFSRNIKWRKHNEEVSAQHQELNEDRRELWESFISIVEQVKPKAFLM 178
Query: 574 ENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLP 633
ENV DI + + + R + R + Y++ ++ A YG+PQ R R+F+ G + E P
Sbjct: 179 ENVSDIAQGGEQEIFRSIINRAEKAGYRIDPKLIYAWQYGVPQLRPRLFISGTKINECAP 238
Query: 634 -PYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDN--YESRD 690
+ PT++ V + V L+DAISDLP ++ E D
Sbjct: 239 MKWPKPTYNSVDKAVT------------------------LEDAISDLPPLEGGWNEKWD 274
Query: 691 EIPYDREPETEFQCFIR 707
E P T +Q +R
Sbjct: 275 ERYSYGGPITPYQTSMR 291
>gi|24527985|emb|CAD33712.1| putative DNA methylase [Escherichia coli]
Length = 314
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 61/120 (50%), Gaps = 5/120 (4%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
D DV+ GG PCQG S N RNKD DE+N+ + F+ +V+ KPKF +NV I+
Sbjct: 61 DCDVVIGGFPCQGFSQANLLRNKD----DERNQLYLEFLRVVNAKKPKFFFAQNVRGILS 116
Query: 582 FAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLP-PYALPTH 640
G + + Y+V+ + YG+PQ R RV + G + K+ Y PTH
Sbjct: 117 LDNGTAIEKIESDFKSLGYKVKKQLFNVADYGVPQMRYRVIIVGVRDDIKVEYIYPQPTH 176
>gi|347726860|gb|AEP19808.1| C5 cytosine DNA methyltransferase [Helicobacter pylori]
Length = 355
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 37/206 (17%)
Query: 513 KSKILPLPG--DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKF 570
K K++ L ++++I GGPPCQG S + K+ L D +N + +++IV +KP+
Sbjct: 61 KEKVIKLAQKLEINMIIGGPPCQGFSN----KGKNLGLKDPRNFLFLEYIEIVRAIKPEI 116
Query: 571 VLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTE 630
++ENV +++ A+G R + YQ+ ++ A YG+PQ R R F+ G
Sbjct: 117 FIIENVKNLISCARGYFLEEIKERFKALGYQLSYQILNAKDYGVPQKRERAFIVGD---- 172
Query: 631 KLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRD 690
R + +D Q + + + +QDAISDL + + E
Sbjct: 173 ----------------------SRFSFVFD---QLDPSLSVNVQDAISDLAYLGSNEGAI 207
Query: 691 EIPYDREPETEFQCFIRLRKDGKKLW 716
E Y ++ ++ LRKD KL+
Sbjct: 208 ESDYLNPIQSSYEAL--LRKDSPKLY 231
>gi|421713201|ref|ZP_16152532.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R32b]
gi|407216567|gb|EKE86404.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R32b]
Length = 351
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 83/189 (43%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ ++D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFVFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + +Y + ++ A YG+PQ R RVFL GA K Y
Sbjct: 121 QKGQLFQQICNAFKERDYILEHAILNALDYGVPQIRERVFLVGALKRFKQKFY------- 173
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + E+ D + Y + + F
Sbjct: 174 -FPKPIKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNVF 213
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 214 LEFVRNSKE 222
>gi|416403376|ref|ZP_11687522.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 0003]
gi|357261713|gb|EHJ10948.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 0003]
Length = 435
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 77/166 (46%), Gaps = 24/166 (14%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+DV+ GGPPCQG S + L D++N + F+ +V L+P + ++ENV +V
Sbjct: 76 IDVVFGGPPCQGFSLMGK-----RSLEDDRNTLVKHFIRLVLELQPNYFVIENVPGMVIG 130
Query: 583 AKGLLGRYALARLIQMNYQVR--MGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTH 640
+ + A Q NYQV+ ++ + YG+PQ R R+FL G++ LP Y
Sbjct: 131 KQQMFLEEIFAEFAQNNYQVKPDYKILNSANYGVPQLRERLFLLGSKKGLNLPNYPSFIT 190
Query: 641 DVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNY 686
D Y + L +++AI DLP V+ Y
Sbjct: 191 D-----------------YTHINDSNLPSTPTVKEAIQDLPEVNQY 219
>gi|67924379|ref|ZP_00517809.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501]
gi|67853772|gb|EAM49101.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501]
Length = 435
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 77/166 (46%), Gaps = 24/166 (14%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+DV+ GGPPCQG S + L D++N + F+ +V L+P + ++ENV +V
Sbjct: 76 IDVVFGGPPCQGFSLMGK-----RSLEDDRNTLVKHFIRLVLELQPNYFVIENVPGMVIG 130
Query: 583 AKGLLGRYALARLIQMNYQVR--MGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTH 640
+ + A Q NYQV+ ++ + YG+PQ R R+FL G++ LP Y
Sbjct: 131 KQQMFLEEIFAEFAQNNYQVKPDYKILNSANYGVPQLRERLFLLGSKKGLNLPNYPSFIT 190
Query: 641 DVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNY 686
D Y + L +++AI DLP V+ Y
Sbjct: 191 D-----------------YTHINDSNLPSTPTVKEAIQDLPEVNQY 219
>gi|420406179|ref|ZP_14905350.1| cytosine-specific methyltransferase [Helicobacter pylori CPY6311]
gi|393024200|gb|EJB25311.1| cytosine-specific methyltransferase [Helicobacter pylori CPY6311]
Length = 281
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 90/192 (46%), Gaps = 35/192 (18%)
Query: 525 VICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAK 584
+I GGPPCQG S + K+ L D +N + +++IV LKP+ ++ENV +++ AK
Sbjct: 1 MIIGGPPCQGFSN----KGKNLGLKDPRNFLFLEYIEIVRALKPEIFIIENVKNLISCAK 56
Query: 585 GLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVL 644
G +L + YQ+ ++ A YG+PQ R R F+ GA
Sbjct: 57 GYFLEEIKEKLNALGYQLSYQILNAKDYGVPQNRERAFIVGAS----------------- 99
Query: 645 RGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQC 704
F+ N + E ++ + +QDAISDL + + E E Y ++ +Q
Sbjct: 100 ----RFSFDFNLL--------EPSQSVNVQDAISDLAYLCSNEGAFESDYLNPIQSSYQA 147
Query: 705 FIRLRKDGKKLW 716
+RKD KL+
Sbjct: 148 L--MRKDSPKLY 157
>gi|251811836|ref|ZP_04826309.1| DNA (cytosine-5-)-methyltransferase [Staphylococcus epidermidis
BCM-HMP0060]
gi|282875124|ref|ZP_06283997.1| DNA (cytosine-5-)-methyltransferase [Staphylococcus epidermidis
SK135]
gi|417914581|ref|ZP_12558225.1| putative modification methylase HaeIII [Staphylococcus epidermidis
VCU109]
gi|421608173|ref|ZP_16049400.1| DNA-cytosine methyltransferase [Staphylococcus epidermidis AU12-03]
gi|251804633|gb|EES57290.1| DNA (cytosine-5-)-methyltransferase [Staphylococcus epidermidis
BCM-HMP0060]
gi|281295889|gb|EFA88410.1| DNA (cytosine-5-)-methyltransferase [Staphylococcus epidermidis
SK135]
gi|341652137|gb|EGS75927.1| putative modification methylase HaeIII [Staphylococcus epidermidis
VCU109]
gi|406656171|gb|EKC82583.1| DNA-cytosine methyltransferase [Staphylococcus epidermidis AU12-03]
Length = 329
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 80/171 (46%), Gaps = 33/171 (19%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
VDVI GGPPCQG S +F + D +N+ ++ V LKPK ++ENV +V
Sbjct: 71 VDVIIGGPPCQGFSLAGKFGR--TFIDDPRNQLFKEYLRFVSILKPKIFIIENVARLVSH 128
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG R + ++ Y+V+ ++ Y +PQ R RVF+ G + E
Sbjct: 129 NKGKTIREIQESIEKLGYKVKYEILQTSDYNIPQKRQRVFIVGYKNIE------------ 176
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIP 693
Y E +L RK+ +++AISDLP + N E + +IP
Sbjct: 177 --------------FNYPE----KLKRKVTIKEAISDLPPLKNGE-KSKIP 208
>gi|407928299|gb|EKG21159.1| hypothetical protein MPH_01515 [Macrophomina phaseolina MS6]
Length = 1010
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 88/183 (48%), Gaps = 15/183 (8%)
Query: 521 GDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIV-FMDIVDFLKPKFVLMENVVDI 579
G +D I G PCQG S R ++ ++ L +N +I +DF +PK+ L+ENVV +
Sbjct: 589 GSIDFIAAGSPCQGFSVLQRDKSSESSL---RNISMIASVAAFIDFYRPKYALLENVVAM 645
Query: 580 VKFAKGLLGRYA--LARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQP--TEKLPPY 635
+ LG + L L+ + YQV + A ++G PQ R R+F+ A P T PP
Sbjct: 646 AHRGREQLGIFPQLLCTLVGLGYQVSQHYLDAWSFGDPQRRSRLFVAIAAPGLTPMPPPT 705
Query: 636 ALPTHDVVLRGVIPTEFER---NTVAYDEGQQAELARKLL-LQDAISDLPSVDNYESRDE 691
+H RG R N + + E + + + ++ ++ DLP V + S+
Sbjct: 706 ITHSHP---RGTPAVALGRNLANNLRFGERRFGPTPFEYISVEQSMGDLPDVGDSHSQTC 762
Query: 692 IPY 694
IPY
Sbjct: 763 IPY 765
>gi|347726862|gb|AEP19809.1| C5 cytosine DNA methyltransferase [Helicobacter pylori]
Length = 355
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 97/207 (46%), Gaps = 37/207 (17%)
Query: 512 FKSKILPLPG--DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPK 569
K K++ L ++++I G PPCQG S + K+ L D +N + +++IV +KP+
Sbjct: 60 IKEKVIKLAKKLEINMIIGRPPCQGFSN----KGKNLGLKDPRNFLFLEYIEIVKAIKPE 115
Query: 570 FVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPT 629
++ENV +I+ AKG RL + YQ+ ++ A YG+PQ R R F+ GA
Sbjct: 116 IFIIENVKNIISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQDRERAFIVGAS-- 173
Query: 630 EKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESR 689
F+ N + E ++ + +QDAISDL + + E
Sbjct: 174 -------------------RFSFDFNLL--------EPSQSVNVQDAISDLAYLCSNEGA 206
Query: 690 DEIPYDREPETEFQCFIRLRKDGKKLW 716
E Y ++ +Q +RK+ KL+
Sbjct: 207 FESDYLNPIQSSYQAL--MRKNSPKLY 231
>gi|420423359|ref|ZP_14922432.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-4]
gi|393042639|gb|EJB43648.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-4]
Length = 351
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 83/189 (43%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ I+D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRILDLVKPKIFVFENVVGLISM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + Y + ++ A YG+PQ R RV L GA + K + P
Sbjct: 121 QKGQLFQRICNAFKERGYILEHAILNALDYGVPQIRERVILVGALKSFK-QKFHFPK--- 176
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + E+ D + Y + + F
Sbjct: 177 ----PIKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNVF 213
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 214 LEFVRNSKE 222
>gi|153814224|ref|ZP_01966892.1| hypothetical protein RUMTOR_00433 [Ruminococcus torques ATCC 27756]
gi|145848620|gb|EDK25538.1| DNA (cytosine-5-)-methyltransferase [Ruminococcus torques ATCC
27756]
Length = 702
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 98/222 (44%), Gaps = 47/222 (21%)
Query: 500 CG----EKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQ 555
CG EKIK V K+K V++I GGPPCQG S + K L D +N
Sbjct: 399 CGDITDEKIKAKVIELCKAK------KVNMIIGGPPCQGFS----LKGKKLGLDDPRNFL 448
Query: 556 LIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLP 615
++ V+ LKP+ ++ENV ++ + G + ++ +M Y V G++ A +G+P
Sbjct: 449 FNEYLRFVEILKPEVFVIENVKALLSTSAGWFKDQIIKKVTEMGYHVEYGVLTASDFGVP 508
Query: 616 QFRMR-VFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQ 674
Q R R +F+ + LP T + ++
Sbjct: 509 QARQRAIFICSKNKSIPLPAATCET------------------------------PVTVR 538
Query: 675 DAISDLPSVDNYESRDEIPYDREPETEFQCFIRLRKDGKKLW 716
DAI DL +++ E E Y EP +E+Q ++R+ KKL+
Sbjct: 539 DAIYDLAYLNSGEGEFEQDYITEPSSEYQK--QMRRGSKKLY 578
>gi|89055380|ref|YP_510831.1| DNA-cytosine methyltransferase [Jannaschia sp. CCS1]
gi|88864929|gb|ABD55806.1| DNA-cytosine methyltransferase [Jannaschia sp. CCS1]
Length = 373
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 84/187 (44%), Gaps = 27/187 (14%)
Query: 521 GDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIV 580
G++ V+ GGPPCQ S +N R + D + ++ IVD L+P++++MENV I
Sbjct: 71 GELSVLVGGPPCQAYSVYNHQRG----MHDARASLFREYLRIVDGLRPEWIVMENVTGIY 126
Query: 581 KFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTH 640
A G R A + Y V ++ A YG+PQ R RV G + + + PTH
Sbjct: 127 SIANGEAVRAIKAEFAALGYAVEDAVLRAEDYGVPQERRRVVFIGNRVGAPI-SHPEPTH 185
Query: 641 DVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPET 700
G+ + ++DAI DLP +DN E+ + Y +
Sbjct: 186 -------------------GPGRANPFTK---IRDAIGDLPPLDNGENPGRVAYADARPS 223
Query: 701 EFQCFIR 707
++Q +R
Sbjct: 224 KYQRQMR 230
>gi|308183851|ref|YP_003927984.1| cytosine specific DNA methyltransferase [Helicobacter pylori
SJM180]
gi|308059771|gb|ADO01667.1| cytosine specific DNA methyltransferase [Helicobacter pylori
SJM180]
Length = 355
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 92/195 (47%), Gaps = 35/195 (17%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
++++I GGPPCQG S + K+ L D +N + ++++V +KP+ ++ENV +++
Sbjct: 72 EINMIIGGPPCQGFSN----KGKNLGLKDPRNFLFLEYIEVVKAIKPEIFIIENVKNLIS 127
Query: 582 FAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHD 641
KG RL + YQ+ ++ A YG+PQ R R F+ GA
Sbjct: 128 CTKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGAS-------------- 173
Query: 642 VVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETE 701
F+ N + E ++ + +Q+AISDL + + E E Y ++
Sbjct: 174 -------RFSFDFNLL--------EPSQSVNIQEAISDLAYLCSNEGAFESDYLNPIQSN 218
Query: 702 FQCFIRLRKDGKKLW 716
+Q +RKD KL+
Sbjct: 219 YQAL--MRKDSPKLY 231
>gi|420406668|ref|ZP_14905838.1| cytosine-specific methyltransferase [Helicobacter pylori CPY6311]
gi|393023505|gb|EJB24619.1| cytosine-specific methyltransferase [Helicobacter pylori CPY6311]
Length = 351
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 83/189 (43%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ ++D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKMFVFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + Y + ++ A YG+PQ R RVFL G + K + P
Sbjct: 121 QKGQLFKQICNAFKERGYILEHAILNALDYGVPQIRERVFLVGVLKSFK-QKFHFPK--- 176
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + E+ D + Y + + F
Sbjct: 177 ----PIKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNVF 213
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 214 LEFVRNSKE 222
>gi|328543334|ref|YP_004303443.1| DNA methylase [Polymorphum gilvum SL003B-26A1]
gi|326415695|gb|ADZ72758.1| DNA methylase, C-5 cytosine-specific family [Polymorphum gilvum
SL003B-26A1]
Length = 418
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 87/191 (45%), Gaps = 19/191 (9%)
Query: 521 GDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIV 580
GD+D + GGPPCQ S N R+ DE+ + ++ +V L PK ++MENV I+
Sbjct: 90 GDLDCLVGGPPCQSFSHNNHHRSA----VDERARLFEHYLTLVGALNPKTLVMENVPGIL 145
Query: 581 KFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQ---PTEKLPPYAL 637
G + LA L ++ + +G ++A +G PQ R RVF+ ++ +E LP
Sbjct: 146 SIDGGRVVDEILASLKELGFDAVVGRLSAEEFGTPQLRRRVFIVASRIGAASELLPN--- 202
Query: 638 PTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPY-DR 696
PTH ER A R + + AI DLP ++N P+
Sbjct: 203 PTHWSPALAKWGGPKERPAGATK--------RPVTVWQAIGDLPEIENGGGVQIAPWASS 254
Query: 697 EPETEFQCFIR 707
P T +Q +R
Sbjct: 255 HPTTTYQREMR 265
>gi|420404923|ref|ZP_14904103.1| cytosine-specific methyltransferase [Helicobacter pylori CPY6271]
gi|393024793|gb|EJB25903.1| cytosine-specific methyltransferase [Helicobacter pylori CPY6271]
Length = 351
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 83/189 (43%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ ++D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKMFVFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + Y + ++ A YG+PQ R RVFL G + K + P
Sbjct: 121 QKGQLFKQICNAFKERGYILEHAILNALDYGVPQIRERVFLVGVLKSFK-QKFHFPK--- 176
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + E+ D + Y + + F
Sbjct: 177 ----PIKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNVF 213
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 214 LEFVRNSKE 222
>gi|295110826|emb|CBL24779.1| DNA-methyltransferase (dcm) [Ruminococcus obeum A2-162]
Length = 312
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 59/106 (55%), Gaps = 4/106 (3%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
D D+I GG PCQG S N R++D DE+N + ++D +PKF L ENV I
Sbjct: 61 DCDIIIGGFPCQGFSVANTKRHED----DERNVLYKQLIRMIDAKRPKFFLAENVKGITN 116
Query: 582 FAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQ 627
AKG + + L ++ Y+V+ ++ A YG+PQ R RV + G +
Sbjct: 117 LAKGKVFQMILKDFTELGYKVKHKILNAADYGVPQTRQRVIIIGVR 162
>gi|347726868|gb|AEP19812.1| C5 cytosine DNA methyltransferase [Helicobacter pylori]
Length = 355
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 61/105 (58%), Gaps = 4/105 (3%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
++++I GGPPCQG S + K+ L D +N + +++IV LKP+ ++ENV +++
Sbjct: 72 EINMIIGGPPCQGFSN----KGKNLGLKDPRNFLFLEYIEIVRALKPEIFIIENVKNLIS 127
Query: 582 FAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGA 626
AKG RL + YQ+ ++ A YG+PQ R R F+ GA
Sbjct: 128 CAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGA 172
>gi|384895439|ref|YP_005769428.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori 35A]
gi|315586055|gb|ADU40436.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori 35A]
Length = 281
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 90/192 (46%), Gaps = 35/192 (18%)
Query: 525 VICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAK 584
+I GGPPCQG S + K+ + D +N + +++IV LKP+ ++ENV +++ AK
Sbjct: 1 MIIGGPPCQGFSN----KGKNLGIKDPRNFLFLEYIEIVKALKPEIFIIENVKNLISCAK 56
Query: 585 GLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVL 644
G RL + YQ+ ++ A YG+PQ R R F+ GA
Sbjct: 57 GYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGAS----------------- 99
Query: 645 RGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQC 704
F+ N + E ++ + +QDAISDL + + + E Y ++ +Q
Sbjct: 100 ----RFSFDFNLL--------EPSQSVNVQDAISDLAYLCSNDGAFESDYLNPIQSSYQA 147
Query: 705 FIRLRKDGKKLW 716
+RKD KL+
Sbjct: 148 L--MRKDSPKLY 157
>gi|420437308|ref|ZP_14936292.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-28]
gi|393053622|gb|EJB54566.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-28]
Length = 348
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 83/189 (43%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ ++D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFVFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + Y + ++ A YG+PQ R RVFL GA K + P
Sbjct: 121 QKGQLFKQICNAFKERGYILEHAILNALDYGVPQTRERVFLVGALKRFK-QKFHFPK--- 176
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + E+ D + Y + + F
Sbjct: 177 ----PIKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNVF 213
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 214 LEFVRNSKE 222
>gi|253827583|ref|ZP_04870468.1| putative methylase [Helicobacter canadensis MIT 98-5491]
gi|313141791|ref|ZP_07803984.1| cytosine-specific DNA methyltransferase [Helicobacter canadensis
MIT 98-5491]
gi|253510989|gb|EES89648.1| putative methylase [Helicobacter canadensis MIT 98-5491]
gi|313130822|gb|EFR48439.1| cytosine-specific DNA methyltransferase [Helicobacter canadensis
MIT 98-5491]
Length = 589
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 93/197 (47%), Gaps = 36/197 (18%)
Query: 513 KSKILPLPGD--VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKF 570
K K++ L + V+++ GGPPCQG S + K+ LADE+N + ++++V+ + P+
Sbjct: 60 KDKVVNLAKELKVNMVIGGPPCQGFS----LKGKNLGLADERNFLFLEYLELVEKVNPEI 115
Query: 571 VLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTE 630
++ENV ++ G + ++ M Y V ++ A YG+PQ R RVF + E
Sbjct: 116 FIIENVKNLYNAVNGYFREEIIKKIKNMGYVVNCKILNAKHYGVPQNRERVFFIAHK--E 173
Query: 631 KLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRD 690
+L + P L V +DAISDL +++ E
Sbjct: 174 RL--LSFPKESNCLVSV--------------------------KDAISDLNYLESGEGTI 205
Query: 691 EIPYDREPETEFQCFIR 707
+ Y EP++++Q +R
Sbjct: 206 QAEYKIEPQSDYQKIMR 222
>gi|449085225|gb|AGE84599.1| cytosine DNA methyltransferase [Helicobacter pylori]
Length = 356
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 37/206 (17%)
Query: 513 KSKILPLPG--DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKF 570
K K++ L ++++I G PPCQG S + K+ L D +N + +++IV +KP+
Sbjct: 61 KEKVIKLAKKLEINMIIGRPPCQGFSN----KGKNLGLKDPRNFLFLEYIEIVKAIKPEI 116
Query: 571 VLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTE 630
++ENV +I+ AKG RL + YQ+ ++ A YG+PQ R R F+ GA
Sbjct: 117 FIIENVKNIISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGAS--- 173
Query: 631 KLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRD 690
F+ N + E ++ + +QDAISDL + + E
Sbjct: 174 ------------------RFSFDFNLL--------EPSQSVNVQDAISDLAYLCSNEGAF 207
Query: 691 EIPYDREPETEFQCFIRLRKDGKKLW 716
E Y ++ +Q +RK+ KL+
Sbjct: 208 ESDYLNPIQSSYQAL--MRKNSPKLY 231
>gi|408906497|emb|CCM12282.1| DNA-cytosine methyltransferase [Helicobacter heilmannii ASB1.4]
Length = 353
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 80/188 (42%), Gaps = 33/188 (17%)
Query: 521 GDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIV 580
G +DV+ GGPPCQ S + + D + ++ I+ + PK L ENVV ++
Sbjct: 67 GSIDVLLGGPPCQSYSTLGKRQ------MDTRAHLFQEYLKILAAVHPKIFLFENVVGLL 120
Query: 581 KFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLP-PYALPT 639
G L A QM YQ+ ++ A +G+PQ R RV L G + + P + PT
Sbjct: 121 SMQGGKLFHSICACFAQMGYQIYSRVLNAMHFGVPQIRQRVILVGVDHSYQKPFVFPKPT 180
Query: 640 HDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPE 699
H+ EF + L+ A+ DLP + + ES D + Y
Sbjct: 181 HE--------KEF------------------INLRLALDDLPQIKSGESGDHLGYRHPAN 214
Query: 700 TEFQCFIR 707
F F+R
Sbjct: 215 NPFLEFVR 222
>gi|420477123|ref|ZP_14975783.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-23]
gi|393093971|gb|EJB94584.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-23]
Length = 352
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 84/189 (44%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ I+D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRILDLVKPKIFVFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + +Y + ++ A YG+PQ R RV L GA + K + P
Sbjct: 121 QKGQLFQRICNAFKERDYILEHAILNALDYGVPQIRERVILVGALKSFK-QKFHFPK--- 176
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + E+ D + Y + + F
Sbjct: 177 ----PIKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNVF 213
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 214 LEFVRNSKE 222
>gi|420461842|ref|ZP_14960629.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-3]
gi|393080005|gb|EJB80734.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-3]
Length = 325
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 84/189 (44%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ I+D +KPK + ENVV ++
Sbjct: 40 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRILDLVKPKIFVFENVVGLMSM 93
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + +Y + ++ A YG+PQ R RV L GA + K + P
Sbjct: 94 QKGQLFQRICNAFKERDYILEHAILNALDYGVPQIRERVILVGALKSFK-QKFHFPK--- 149
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + E+ D + Y + + F
Sbjct: 150 ----PIKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNVF 186
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 187 LEFVRNSKE 195
>gi|218134306|ref|ZP_03463110.1| hypothetical protein BACPEC_02199 [[Bacteroides] pectinophilus ATCC
43243]
gi|217991681|gb|EEC57687.1| DNA (cytosine-5-)-methyltransferase [[Bacteroides] pectinophilus
ATCC 43243]
Length = 622
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 98/222 (44%), Gaps = 47/222 (21%)
Query: 500 CG----EKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQ 555
CG EKIK V K+K V++I GGPPCQG S + K L D +N
Sbjct: 319 CGDITDEKIKAKVIELCKAK------KVNMIIGGPPCQGFS----LKGKKLGLDDPRNFL 368
Query: 556 LIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLP 615
++ V+ LKP+ ++ENV ++ + G + ++ +M Y V G++ A +G+P
Sbjct: 369 FNEYLRFVEILKPEVFVIENVKALLSTSAGWFKDQIIKKVTEMGYHVEYGVLTASDFGVP 428
Query: 616 QFRMR-VFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQ 674
Q R R +F+ + LP A + ++
Sbjct: 429 QARQRAIFICSKNKSIPLPA------------------------------ATCETPVTVR 458
Query: 675 DAISDLPSVDNYESRDEIPYDREPETEFQCFIRLRKDGKKLW 716
DAI DL +++ E E Y EP +E+Q ++R+ KKL+
Sbjct: 459 DAIYDLAYLNSGEGEFEQDYITEPSSEYQK--QMRRGSKKLY 498
>gi|444301295|gb|AGD98763.1| C5 cytosine DNA methyltransferase [Helicobacter pylori]
Length = 355
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 61/105 (58%), Gaps = 4/105 (3%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
++++I GGPPCQG S + K+ L D +N + +++IV LKP+ ++ENV +++
Sbjct: 72 EINMIIGGPPCQGFSN----KGKNLGLKDPRNFLFLEYIEIVRALKPEIFIIENVKNLIS 127
Query: 582 FAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGA 626
AKG RL + YQ+ ++ A YG+PQ R R F+ GA
Sbjct: 128 CAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQDRERAFIVGA 172
>gi|420399961|ref|ZP_14899165.1| cytosine-specific methyltransferase [Helicobacter pylori CPY3281]
gi|393019502|gb|EJB20645.1| cytosine-specific methyltransferase [Helicobacter pylori CPY3281]
Length = 351
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 83/189 (43%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ ++D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLQLLDLVKPKMFVFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + Y + ++ A YG+PQ R RV L GA + K + P
Sbjct: 121 QKGQLFKQICNAFKERGYILEHAILNALDYGVPQIRERVILVGALKSFK-QKFHFPK--- 176
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + E+ D + Y + + F
Sbjct: 177 ----PIKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNVF 213
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 214 LEFVRNSKE 222
>gi|171679563|ref|XP_001904728.1| hypothetical protein [Podospora anserina S mat+]
gi|170939407|emb|CAP64635.1| unnamed protein product [Podospora anserina S mat+]
Length = 1287
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 77/161 (47%), Gaps = 12/161 (7%)
Query: 485 GPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNK 544
P +D P G + + G S +P PGDV+VI G PC G S K
Sbjct: 849 APDQDIVHPFYG---SVDDLLRLALEGKFSDNVPRPGDVEVISAGSPCPGFSLLT-IDKK 904
Query: 545 DNPLADEKNKQLIV-FMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARL----IQMN 599
D L KN+ ++ F +DF +PK+ ++ENV IV+ A + L++L I +
Sbjct: 905 D--LKQTKNQSMVASFAAFIDFYRPKYAVLENVASIVQ-AHQNRSQDTLSQLFCAVIGLG 961
Query: 600 YQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTH 640
YQ ++ A +G PQ R RVFL A P +LP P+H
Sbjct: 962 YQAQLVNGDAWTHGAPQSRNRVFLLIATPDVRLPEAPAPSH 1002
>gi|420480501|ref|ZP_14979145.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-1]
gi|420510945|ref|ZP_15009434.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-1b]
gi|393098414|gb|EJB99006.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-1]
gi|393121453|gb|EJC21936.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-1b]
Length = 351
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 82/189 (43%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ ++D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFIFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + Y + ++ A YG+PQ R RV L GA + K Y
Sbjct: 121 QKGQLFKQICNAFKERGYILEHAILNALDYGVPQMRERVILVGALKSFKQKFY------- 173
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + E+ D + Y + + F
Sbjct: 174 -FPKPIKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNVF 213
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 214 LEFVRNSKE 222
>gi|420502448|ref|ZP_15000989.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-41]
gi|393153728|gb|EJC54021.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-41]
Length = 351
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 82/189 (43%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ I+D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRILDLVKPKIFVFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + Y + ++ A YG+PQ R RV L GA + K Y
Sbjct: 121 QKGQLFQRICNAFKERGYILEHAILNALDYGVPQIRERVILVGALKSFKQKFY------- 173
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + E+ D + Y + + F
Sbjct: 174 -FPKPIKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNVF 213
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 214 LEFVRNSKE 222
>gi|420398545|ref|ZP_14897758.1| cytosine-specific methyltransferase [Helicobacter pylori CPY1962]
gi|393015219|gb|EJB16390.1| cytosine-specific methyltransferase [Helicobacter pylori CPY1962]
Length = 352
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 84/189 (44%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ ++D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKMFVFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + +Y + ++ A YG+PQ R RV L GA + K + P
Sbjct: 121 QKGQLFKQICNAFKERDYILEHAILNALDYGVPQIRERVILVGALKSFK-QKFHFPK--- 176
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + E+ D + Y + + F
Sbjct: 177 ----PIKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNVF 213
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 214 LEFVRNSKE 222
>gi|308182632|ref|YP_003926759.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori PeCan4]
gi|308064817|gb|ADO06709.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori PeCan4]
Length = 351
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 81/189 (42%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ ++D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKMFVFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + Y + ++ A YG+PQ R RV L GA + K
Sbjct: 121 QKGQLFKQICNAFKERGYILEHAILNALDYGVPQIRERVILVGALKSFK--------QKF 172
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + E+ D + Y + + F
Sbjct: 173 HFHKPIKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNVF 213
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 214 LEFVRNSKE 222
>gi|350272585|ref|YP_004883893.1| putative methyltransferase [Oscillibacter valericigenes Sjm18-20]
gi|348597427|dbj|BAL01388.1| putative methyltransferase [Oscillibacter valericigenes Sjm18-20]
Length = 411
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 79/153 (51%), Gaps = 12/153 (7%)
Query: 477 LKVRWRNYGPSEDTWEPIEGL--SNCGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQG 534
L V +N+ P +PIE SN G+ + ++ + + + G+VDV+ GGPPCQG
Sbjct: 104 LNVYKKNFSPQFALDKPIETYIDSNIGDPLSDY-----ERNFISMVGNVDVLIGGPPCQG 158
Query: 535 VSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALAR 594
S N + +P +N + + + +KPK++L+ENV + G++ A +
Sbjct: 159 NSDLNNHTRRSDP----RNLLYLRMIRCAEIVKPKYILIENVPGVQHDKHGVVD-IAKST 213
Query: 595 LIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQ 627
L M Y++ G++ A G+PQ R R FL ++
Sbjct: 214 LEDMGYRLDSGIIDMSAIGVPQKRKRFFLIASK 246
>gi|386750888|ref|YP_006224108.1| type II DNA modification methyltransferase [Helicobacter pylori
Shi417]
gi|384557146|gb|AFH97614.1| type II DNA modification methyltransferase [Helicobacter pylori
Shi417]
Length = 348
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 84/189 (44%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ ++D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKMFVFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + +Y + ++ A YG+PQ R RV L GA + K + P
Sbjct: 121 QKGQLFKQICNAFKERDYILEHAILNALDYGVPQIRERVILVGALKSFK-QKFHFPK--- 176
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + E+ D + Y + + F
Sbjct: 177 ----PIKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNVF 213
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 214 LEFVRNSKE 222
>gi|444301297|gb|AGD98764.1| C5 cytosine DNA methyltransferase [Helicobacter pylori]
Length = 354
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 94/207 (45%), Gaps = 37/207 (17%)
Query: 512 FKSKILPLPG--DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPK 569
K K++ L ++++I G PPCQG S + K+ L D +N + +++IV +KP+
Sbjct: 60 IKEKVIKLAKKLEINMIIGRPPCQGFSN----KGKNLGLKDPRNFLFLEYIEIVKAIKPE 115
Query: 570 FVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPT 629
++ENV +I+ AKG RL + YQ+ ++ A YG+PQ R R F+ GA
Sbjct: 116 IFIIENVKNIISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGA--- 172
Query: 630 EKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESR 689
+ F + + Q +QDAISDL + + E
Sbjct: 173 --------------------SRFSFDFYLLEPSQSVN------VQDAISDLAYLCSNEGA 206
Query: 690 DEIPYDREPETEFQCFIRLRKDGKKLW 716
E Y ++ +Q +RK+ KL+
Sbjct: 207 FESDYLNPIQSSYQAL--MRKNSPKLY 231
>gi|428305832|ref|YP_007142657.1| DNA-cytosine methyltransferase [Crinalium epipsammum PCC 9333]
gi|428247367|gb|AFZ13147.1| DNA-cytosine methyltransferase [Crinalium epipsammum PCC 9333]
Length = 435
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 90/187 (48%), Gaps = 30/187 (16%)
Query: 509 THGFKSKILPLPGD--VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFL 566
T G +I+P G+ +D++ GGPPCQG S + R D+P +N F+ ++ L
Sbjct: 62 TTGKDIRIIPAIGNKEIDIVFGGPPCQGFSLMGK-RMLDDP----RNSLAFHFIRLIGEL 116
Query: 567 KPKFVLMENVVDIV-----KFAKGLLGRYA-LARLIQMNYQVRMGMMAAGAYGLPQFRMR 620
+PK+ ++ENV + KF ++ + + L + +YQ+ + A YG+PQ R R
Sbjct: 117 QPKYFVLENVRGMAIGKHKKFIAEIIEEFQKIGYLTKSDYQI----LNAAEYGVPQNRER 172
Query: 621 VFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDL 680
+FL G + +LP Y P + R + L + DA+ DL
Sbjct: 173 LFLIGCRQDMQLPKY-------------PDKLTRPAKQKKINSTSNLPLNPTVWDALQDL 219
Query: 681 PSVDNYE 687
PS++NY+
Sbjct: 220 PSIENYQ 226
>gi|420530985|ref|ZP_15029360.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-28b]
gi|393139011|gb|EJC39392.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-28b]
Length = 351
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 83/189 (43%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ I+D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRILDLVKPKIFVFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + Y + ++ A YG+PQ R RV L GA + K + P
Sbjct: 121 QKGQLFQRICNAFKERGYILEHAILNALDYGVPQIRERVILVGALKSFK-QKFHFPK--- 176
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + E+ D + Y + + F
Sbjct: 177 ----PIKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNVF 213
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 214 LEFVRNSKE 222
>gi|298253558|ref|ZP_06977348.1| site-specific DNA methylase [Gardnerella vaginalis 5-1]
gi|297532325|gb|EFH71213.1| site-specific DNA methylase [Gardnerella vaginalis 5-1]
Length = 317
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 86/185 (46%), Gaps = 33/185 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+DVI GGPPCQG S + + + D++N ++ +V+ +KPK+ +MENV +++
Sbjct: 30 IDVIIGGPPCQGFSQ----KGQRKTIYDKRNFLFEYYVKVVELVKPKYFVMENVPNLLTA 85
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG M Y ++ G++ A +G+PQ R R + G
Sbjct: 86 EKGYFFNEIETLFNAMGYFLQHGVLNAADFGVPQNRKRAVIIGK---------------- 129
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
+ GV P+ + L K+ + DAISDL +++ E + Y P++E+
Sbjct: 130 -MNGVAPS------------LPSSLNEKVTIWDAISDLAFLESGEGDEVQEYRYAPQSEY 176
Query: 703 QCFIR 707
+ +R
Sbjct: 177 EKKLR 181
>gi|156050777|ref|XP_001591350.1| hypothetical protein SS1G_07976 [Sclerotinia sclerotiorum 1980]
gi|154692376|gb|EDN92114.1| hypothetical protein SS1G_07976 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 1392
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 68/119 (57%), Gaps = 13/119 (10%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFM-DIVDFLKPKFVLMEN 575
+P PGDVDVI G PCQG S N + D L +N+ L+ + +DF +PK+ L+EN
Sbjct: 725 IPSPGDVDVILAGSPCQGFSRMNMNKGNDQSL---RNQSLVASVAAYIDFYRPKYGLLEN 781
Query: 576 VVDIVKFAKGLLGR------YALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQP 628
V+ + + KG LGR + ++ + YQV++ ++ + ++G Q R R+F+ A P
Sbjct: 782 VLTMAQ--KG-LGREEDILSQLICTIVGLGYQVQLFLLDSWSFGSSQARSRIFVSFAAP 837
>gi|15611502|ref|NP_223153.1| type II DNA modification (methyltransferase [Helicobacter pylori
J99]
gi|4154963|gb|AAD06007.1| TYPE II DNA MODIFICATION ENZYME (METHYLTRANSFERASE) [Helicobacter
pylori J99]
Length = 351
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 82/189 (43%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ I+D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRILDLVKPKIFVFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + Y + ++ A YG+PQ R RV L GA + K Y
Sbjct: 121 QKGQLFQRICNAFKERGYILEHAILNALDYGVPQVRERVILVGALKSFKQKFY------- 173
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + E+ D + Y + + F
Sbjct: 174 -FPKPIKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNVF 213
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 214 LEFVRNSKE 222
>gi|186683211|ref|YP_001866407.1| DNA-cytosine methyltransferase [Nostoc punctiforme PCC 73102]
gi|14594714|gb|AAK68647.1| cytosine-specific DNA methyltransferase [Nostoc punctiforme PCC
73102]
gi|186465663|gb|ACC81464.1| DNA-cytosine methyltransferase [Nostoc punctiforme PCC 73102]
Length = 421
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 83/171 (48%), Gaps = 26/171 (15%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIV- 580
++DV+ G PCQG S + R D+P +N + F +V LKPKF +MENV I
Sbjct: 79 EIDVVICGSPCQGFSLIGK-RVVDDP----RNSLVFHFHRLVFELKPKFFVMENVRGITV 133
Query: 581 ----KFAKGLLGRYAL-ARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPY 635
K + L+ + + ++ NYQ+ + A YG+PQ R R+FL GA+ +LP Y
Sbjct: 134 GEHKKILQSLISEFKIYGYKVEENYQI----LNAANYGVPQSRERLFLIGAREDVELPKY 189
Query: 636 ALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNY 686
P + + +P + + + + DAI DLP ++NY
Sbjct: 190 PQP----ITKPALPNNLTSKKI-------SNIPLSPTVWDAIKDLPEIENY 229
>gi|420412053|ref|ZP_14911182.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4228]
gi|420416683|ref|ZP_14915792.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4044]
gi|393027711|gb|EJB28799.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4228]
gi|393037112|gb|EJB38150.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4044]
Length = 351
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 82/189 (43%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ I+D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRILDLVKPKIFVFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + Y + ++ A YG+PQ R RV L GA + K Y
Sbjct: 121 QKGQLFQRICNAFKERGYILEHAILNALDYGVPQVRERVILVGALKSFKQKFY------- 173
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + E+ D + Y + + F
Sbjct: 174 -FPKPIKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNVF 213
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 214 LEFVRNSKE 222
>gi|420473869|ref|ZP_14972547.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-19]
gi|393090997|gb|EJB91630.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-19]
Length = 351
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 82/189 (43%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ ++D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFIFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + Y + ++ A YG+PQ R RV L GA + K Y
Sbjct: 121 QKGQLFQRICNAFKERGYILEHAILNALDYGVPQVRERVILVGALKSFKQKFY------- 173
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + E+ D + Y + + F
Sbjct: 174 -FPKPIKTHFS-------------------LKDALGDLPPIQSSENGDALGYLKNADNVF 213
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 214 LEFVRNSKE 222
>gi|410643136|ref|ZP_11353638.1| DNA (cytosine-5-)-methyltransferase [Glaciecola chathamensis S18K6]
gi|410137314|dbj|GAC11825.1| DNA (cytosine-5-)-methyltransferase [Glaciecola chathamensis S18K6]
Length = 356
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 87/199 (43%), Gaps = 32/199 (16%)
Query: 509 THGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKP 568
T KS L GD +I GGPPCQG S + K L DE+N + +++ V+ + P
Sbjct: 57 TVNIKSVFGNLNGDKTIIIGGPPCQGFSQ----KGKRIGLNDERNFLFLKYIECVEVINP 112
Query: 569 KFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQP 628
++ENV ++ G + +L + Y + ++ A YG+PQ R R F+ G
Sbjct: 113 IAFVIENVPGLLTNEGGFFLNEIIEKLQGLGYSLFERVLNASDYGVPQNRKRAFIVG--- 169
Query: 629 TEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYES 688
L T + PTEF +K+ + DAISDLP + + E
Sbjct: 170 --------LRTENATF--TWPTEF---------------GKKVTINDAISDLPILKSGEG 204
Query: 689 RDEIPYDREPETEFQCFIR 707
Y P +++Q +R
Sbjct: 205 SKSAGYRTAPVSDYQVKMR 223
>gi|385228214|ref|YP_005788147.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori Puno120]
gi|344334652|gb|AEN15096.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori Puno120]
Length = 351
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 83/189 (43%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ ++D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKMFVFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + Y + ++ A YG+PQ R RV L GA + K + P
Sbjct: 121 QKGQLFKQICNAFKERGYILEHAILNALDYGVPQIRERVILVGALKSFK-QKFHFPK--- 176
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + E+ D + Y + + F
Sbjct: 177 ----PIKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNVF 213
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 214 LEFVRNSKE 222
>gi|365120060|ref|ZP_09337880.1| DNA (cytosine-5-)-methyltransferase [Tannerella sp. 6_1_58FAA_CT1]
gi|363647912|gb|EHL87106.1| DNA (cytosine-5-)-methyltransferase [Tannerella sp. 6_1_58FAA_CT1]
Length = 334
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 63/114 (55%), Gaps = 17/114 (14%)
Query: 521 GDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIV 580
GDVDVI GGPPCQG S NR++ + + D +NK ++ V + PK +++ENV
Sbjct: 70 GDVDVIVGGPPCQGFSSANRWQKE---MEDPRNKLFFEYIRFVQKIHPKVIMIENV---- 122
Query: 581 KFAKGLLGR---YALARLIQM----NYQVRMGMMAAGAYGLPQFRMRVFLWGAQ 627
+GLL R YA+ R+ ++ Y + ++ A YG+PQ R R + G +
Sbjct: 123 ---RGLLTRDNGYAIERIKEILGAEEYNITYQVLDASEYGVPQNRKRAIIVGVR 173
>gi|384899203|ref|YP_005774583.1| Type II DNA modification enzyme [Helicobacter pylori F30]
gi|317179147|dbj|BAJ56935.1| Type II DNA modification enzyme [Helicobacter pylori F30]
Length = 351
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 83/189 (43%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ ++D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKMFVFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + Y + ++ A YG+PQ R RV L GA + K + P
Sbjct: 121 QKGQLFKQICNAFKERGYILEHAILNALDYGVPQIRERVILVGALKSFK-QKFHFPK--- 176
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + E+ D + Y + + F
Sbjct: 177 ----PIKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNVF 213
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 214 LEFVRNSKE 222
>gi|420427151|ref|ZP_14926196.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-9]
gi|393042084|gb|EJB43095.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-9]
Length = 335
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 83/189 (43%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ ++D +KPK + ENVV ++
Sbjct: 54 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFVFENVVGLMSM 107
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + +Y + ++ A YG+PQ R RV L GA + K Y
Sbjct: 108 QKGQLFQQICNAFKERDYILEHAILNALDYGVPQIRERVILVGALKSFKQKFY------- 160
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + E+ D + Y + + F
Sbjct: 161 -FPKPIKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNVF 200
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 201 LEFVRNSKE 209
>gi|386752472|ref|YP_006225691.1| type II DNA modification methyltransferase [Helicobacter pylori
Shi169]
gi|384558730|gb|AFH99197.1| type II DNA modification methyltransferase [Helicobacter pylori
Shi169]
Length = 348
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 83/189 (43%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ ++D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKMFVFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + Y + ++ A YG+PQ R RV L GA + K + P
Sbjct: 121 QKGQLFKQICNAFKERGYILEHAILNALDYGVPQIRERVILVGALKSFK-QKFHFPK--- 176
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + E+ D + Y + + F
Sbjct: 177 ----PIKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNVF 213
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 214 LEFVRNSKE 222
>gi|322708438|gb|EFZ00016.1| DNA (cytosine-5)-methyltransferase, putative [Metarhizium
anisopliae ARSEF 23]
Length = 1166
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 89/195 (45%), Gaps = 17/195 (8%)
Query: 511 GFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLI-VFMDIVDFLKPK 569
G SK +P G VD I GG PC G S R D KN+ L+ F VD +PK
Sbjct: 747 GNFSKSVPTIGSVDFISGGSPCPGFSTLTNDRTTDE---QRKNQSLVAAFASCVDLYRPK 803
Query: 570 FVLMENVVDIV----KFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWG 625
+ L+ENV I+ + +LG++ A ++ + YQ ++ + A + G Q R RVF+
Sbjct: 804 YGLLENVPGILPSKANREQDVLGQFMCA-IVGIGYQAQVFYLDASSCGSAQRRSRVFISF 862
Query: 626 AQPTEKLPPYALPTHD------VVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISD 679
A P KLP TH G +PT R+ +A + +A + + S
Sbjct: 863 AAPNYKLPGKPQQTHSHPPDTRYTSLGKLPT--RRHVLAERDFLRATPFSYSVARQVSSG 920
Query: 680 LPSVDNYESRDEIPY 694
LP + N ++ I +
Sbjct: 921 LPKIHNGQTDTCIAF 935
>gi|385216117|ref|YP_005776074.1| Type II DNA modification enzyme [Helicobacter pylori F32]
gi|317180646|dbj|BAJ58432.1| Type II DNA modification enzyme [Helicobacter pylori F32]
Length = 348
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 83/189 (43%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ ++D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKMFVFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + Y + ++ A YG+PQ R RV L GA + K + P
Sbjct: 121 QKGQLFKQICNAFKERGYILEHAILNALDYGVPQIRERVILVGALKSFK-QKFHFPK--- 176
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + E+ D + Y + + F
Sbjct: 177 ----PIKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNVF 213
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 214 LEFVRNSKE 222
>gi|386755513|ref|YP_006228730.1| type II DNA modification (methyltransferase) [Helicobacter pylori
PeCan18]
gi|384561771|gb|AFI02237.1| type II DNA modification (methyltransferase) [Helicobacter pylori
PeCan18]
Length = 351
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 82/189 (43%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ I+D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRILDLVKPKIFVFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + Y + ++ A YG+PQ R RV L GA + K Y
Sbjct: 121 QKGQLFQRICNAFKERGYILEHAILNALDYGVPQVRERVILVGALKSFKQKFY------- 173
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + E+ D + Y + + F
Sbjct: 174 -FPKPIKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNIF 213
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 214 LEFVRNSKE 222
>gi|353236422|emb|CCA68417.1| hypothetical protein PIIN_02281 [Piriformospora indica DSM 11827]
Length = 1109
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 82/179 (45%), Gaps = 26/179 (14%)
Query: 517 LPLPGDVDVICGGPPCQGVSGF-----NRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFV 571
P PG+VD+I GGPPC+ S + R R+ D NK L V +
Sbjct: 727 FPKPGEVDIIVGGPPCRPSSAYLRRLGKRPRSPDIQTWRNPNKSLYVGRRYTERGHHSGQ 786
Query: 572 LMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEK 631
+ ++ +F L + LI +YQVR G++ AG +G+PQ R RVF+ A+
Sbjct: 787 APTHGNEVCRF----LTNVSYLMLIG-SYQVRYGVLNAGQHGVPQIRRRVFVIAAKRGNL 841
Query: 632 LPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARK---------LLLQDAISDLP 681
LP PTH + NTV +EG+ ++R+ + + DAI+DLP
Sbjct: 842 LPDLPQPTH-------VAMHATHNTVTVEEGKVYTVSRRRENNAPLYAVTVGDAITDLP 893
>gi|380483902|emb|CCF40335.1| cytosine-specific methyltransferase [Colletotrichum higginsianum]
Length = 1246
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 73/143 (51%), Gaps = 9/143 (6%)
Query: 502 EKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIV-FM 560
E++++ G S +P G VD + GG PC G S + K L KN+ L+ F
Sbjct: 770 EELQKLALLGTFSDNVPEIGQVDFVSGGSPCPGFSRLTSDKTKPKQL---KNQSLVAAFA 826
Query: 561 DIVDFLKPKFVLMENVVDIVK---FAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQF 617
+D +PK+ L+ENV IV+ K + R + ++ + YQ R ++ + ++G PQ
Sbjct: 827 SFIDTYRPKYGLLENVEGIVQPETKKKEDVFRQLICAIVGLGYQTRCFLLDSWSHGAPQT 886
Query: 618 RMRVFLWGAQPTEKLPPYALPTH 640
R RVFL A P KLP +P H
Sbjct: 887 RTRVFLCFAAPGLKLP--KVPRH 907
>gi|385226718|ref|YP_005786642.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori SNT49]
gi|344331631|gb|AEN16661.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori SNT49]
Length = 351
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 83/189 (43%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ ++D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFVFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + Y + ++ A YG+PQ R RV L GA + K + P
Sbjct: 121 QKGQLFKQICNAFKERGYILEHAILNALDYGVPQIRERVILVGALKSFK-QKFRFPK--- 176
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + E+ D + Y + + F
Sbjct: 177 ----PIKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNVF 213
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 214 LEFVRNSKE 222
>gi|164510148|emb|CAJ40945.1| putative DNA cytosine methyltransferase [Sordaria macrospora]
Length = 1536
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 63/117 (53%), Gaps = 9/117 (7%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIV-FMDIVDFLKPKFVLMEN 575
+P PG+VD I G PC GF+ L KN+ L+ F VDF +PK+ ++EN
Sbjct: 929 VPRPGEVDFIAAGSPC---PGFSLLTQDKKVLNQVKNQSLVASFASFVDFYRPKYGVLEN 985
Query: 576 VVDIVKF----AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQP 628
V IV+ + +L + A LI M YQ ++ + A A+G PQ R RVFL+ A P
Sbjct: 986 VSGIVQTFVNRKQDVLSQLFCA-LIGMGYQAQLTLGDAWAHGAPQSRERVFLYFAAP 1041
>gi|336273254|ref|XP_003351382.1| hypothetical protein SMAC_03688 [Sordaria macrospora k-hell]
gi|380092903|emb|CCC09656.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1536
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 63/117 (53%), Gaps = 9/117 (7%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIV-FMDIVDFLKPKFVLMEN 575
+P PG+VD I G PC GF+ L KN+ L+ F VDF +PK+ ++EN
Sbjct: 929 VPRPGEVDFIAAGSPC---PGFSLLTQDKKVLNQVKNQSLVASFASFVDFYRPKYGVLEN 985
Query: 576 VVDIVKF----AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQP 628
V IV+ + +L + A LI M YQ ++ + A A+G PQ R RVFL+ A P
Sbjct: 986 VSGIVQTFVNRKQDVLSQLFCA-LIGMGYQAQLTLGDAWAHGAPQSRERVFLYFAAP 1041
>gi|283783021|ref|YP_003373775.1| DNA (cytosine-5-)-methyltransferase [Gardnerella vaginalis 409-05]
gi|283441534|gb|ADB14000.1| DNA (cytosine-5-)-methyltransferase [Gardnerella vaginalis 409-05]
Length = 357
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 86/185 (46%), Gaps = 33/185 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+DVI GGPPCQG S + + + D++N ++ +V+ +KPK+ +MENV +++
Sbjct: 70 IDVIIGGPPCQGFSQ----KGQRKTIYDKRNFLFEYYVKVVELVKPKYFVMENVPNLLTA 125
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG M Y ++ G++ A +G+PQ R R + G
Sbjct: 126 EKGYFFNEIETLFNAMGYFLQHGVLNAADFGVPQNRKRAVIIGK---------------- 169
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
+ GV P+ + L K+ + DAISDL +++ E + Y P++E+
Sbjct: 170 -MNGVAPS------------LPSSLNEKVTIWDAISDLAFLESGEGDEVQEYRYAPQSEY 216
Query: 703 QCFIR 707
+ +R
Sbjct: 217 EKKLR 221
>gi|78778763|ref|YP_396875.1| DNA-cytosine methyltransferase [Prochlorococcus marinus str. MIT
9312]
gi|78712262|gb|ABB49439.1| DNA-cytosine methyltransferase [Prochlorococcus marinus str. MIT
9312]
Length = 686
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 91/197 (46%), Gaps = 34/197 (17%)
Query: 521 GDVDVICGGPPCQGVSGFNRFRNKDNPLA------DEKNKQLI-VFMDIVDFLKPKFVLM 573
G++ +I GGPPCQ S ++R + ++ +E ++L F+ IV+ +KPK LM
Sbjct: 119 GEISLIAGGPPCQPFSRNIKWRKHNEEVSAQHQELNEDRRELWESFISIVEQVKPKAFLM 178
Query: 574 ENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLP 633
ENV DI + + + R + R + Y++ ++ A YG+PQ R R+F+ G + E P
Sbjct: 179 ENVTDIAQTGEQEIYRSIINRAEKAGYRINPKLIYAWQYGVPQLRPRLFISGTKINECAP 238
Query: 634 -PYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDN--YESRD 690
+ P +D V V L +AISDLP + E D
Sbjct: 239 MKWPKPKYDSVEEAVT------------------------LDEAISDLPPLKGGWNEKWD 274
Query: 691 EIPYDREPETEFQCFIR 707
E P+ ++Q +R
Sbjct: 275 EKYSYEGPKNDYQKLMR 291
>gi|448429916|ref|ZP_21584687.1| DNA-cytosine methyltransferase [Halorubrum tebenquichense DSM
14210]
gi|445689621|gb|ELZ41849.1| DNA-cytosine methyltransferase [Halorubrum tebenquichense DSM
14210]
Length = 403
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 81/186 (43%), Gaps = 34/186 (18%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
VD++ GGPPCQ GF+ + D +D++N + F+ V+ L PK L ENV +
Sbjct: 76 VDLVAGGPPCQ---GFSEVVSPDG--SDDRNHLFVNFISWVNELDPKAALFENVRGMTNT 130
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTE-KLPPYALPTHD 641
A G QM Y V ++ A +G+PQ R R+ + + +E +LP
Sbjct: 131 ADGKFFDAVEESFDQMGYDVTHRVVEASDFGVPQHRHRLLVLATKKSETELPFDGFELDP 190
Query: 642 VVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETE 701
V + GVI D I DLP V E++ E YD EPET
Sbjct: 191 VDIPGVI--------------------------DGIGDLPEVGPGETKTE--YDAEPETV 222
Query: 702 FQCFIR 707
Q +R
Sbjct: 223 IQRDLR 228
>gi|384887473|ref|YP_005761984.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori 52]
gi|261839303|gb|ACX99068.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori 52]
Length = 348
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 83/189 (43%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ ++D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKMFVFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + Y + ++ A YG+PQ R RV L GA + K + P
Sbjct: 121 QKGQLFKQICNAFKERGYILEHAILNALDYGVPQIRERVILVGALKSFK-QKFHFPK--- 176
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + E+ D + Y + + F
Sbjct: 177 ----PIKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNVF 213
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 214 LEFVRNSKE 222
>gi|421720709|ref|ZP_16159989.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R046Wa]
gi|407219301|gb|EKE89118.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R046Wa]
Length = 355
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 96/206 (46%), Gaps = 37/206 (17%)
Query: 513 KSKILPLPG--DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKF 570
K K++ L ++++I G PPCQG S + K+ L D +N + +++IV +KP+
Sbjct: 61 KEKVIKLAQKLEINMIIGEPPCQGFSN----KGKNLGLKDPRNFLFLEYIEIVKAIKPEI 116
Query: 571 VLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTE 630
++ENV +I+ AKG RL + YQ+ ++ A YG+PQ R R F+ GA
Sbjct: 117 FIIENVKNIISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGAS--- 173
Query: 631 KLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRD 690
F+ N + E ++ + +QDAISDL + + E
Sbjct: 174 ------------------RFSFDFNLL--------EPSQSVNVQDAISDLAYLCSNEGAF 207
Query: 691 EIPYDREPETEFQCFIRLRKDGKKLW 716
Y ++ +Q +RKD KL+
Sbjct: 208 GSDYLNPIQSNYQAL--MRKDSPKLY 231
>gi|299756527|ref|XP_001829400.2| hypothetical protein CC1G_00579 [Coprinopsis cinerea okayama7#130]
gi|298411717|gb|EAU92360.2| hypothetical protein CC1G_00579 [Coprinopsis cinerea okayama7#130]
Length = 1235
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 65/139 (46%), Gaps = 19/139 (13%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP PG DVI G PCQ S N ++ +D KN ++ + + ++ + V +ENV
Sbjct: 842 LPPPGSFDVIVIGFPCQAHSALNMYKKA----SDVKNNLVLNAISYIQYMGARIVYLENV 897
Query: 577 VDIVKF-----------AKGLLGRYALARLIQ----MNYQVRMGMMAAGAYGLPQFRMRV 621
+ ++ +G + AL LI+ M YQ+R + AG YG PQ R R
Sbjct: 898 MGFMRTPLNARQASPYKVQGGIEMGALKVLIRALLDMGYQLRFAALQAGHYGTPQGRERF 957
Query: 622 FLWGAQPTEKLPPYALPTH 640
L A P +LP PTH
Sbjct: 958 ILVAALPGTQLPELPQPTH 976
>gi|342732841|ref|YP_004771680.1| cytosine-specific methyltransferase [Candidatus Arthromitus sp.
SFB-mouse-Japan]
gi|342330296|dbj|BAK56938.1| cytosine-specific methyltransferase [Candidatus Arthromitus sp.
SFB-mouse-Japan]
Length = 375
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 85/192 (44%), Gaps = 30/192 (15%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
+VDVI GPPCQG F+ ++D + D +NK + + V +PK ++ENV +
Sbjct: 74 EVDVIIAGPPCQG---FSLTGSRD--INDSRNKLYVAVVHAVQHFRPKAFMIENVPGMAT 128
Query: 582 FAKGLLGRYALARLIQMNYQVRM--GMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPT 639
KG + + + M Y V + + A YG+PQFR R+F G + + P
Sbjct: 129 LYKGAVKQQIINTFEDMGYAVTVTDSPLLAADYGVPQFRKRMFFVGYRKNLGYDYFKFPE 188
Query: 640 HDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPE 699
+ I T DAISDLPS+ + + + Y EP+
Sbjct: 189 PLLDAEHYIGTA-----------------------DAISDLPSLVDELGSEIMDYINEPQ 225
Query: 700 TEFQCFIRLRKD 711
+++Q +R+ D
Sbjct: 226 SDYQKLMRIDSD 237
>gi|409910991|ref|YP_006889456.1| DNA cytosine methyltransferase [Geobacter sulfurreducens KN400]
gi|298504551|gb|ADI83274.1| DNA cytosine methyltransferase [Geobacter sulfurreducens KN400]
Length = 428
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 81/177 (45%), Gaps = 26/177 (14%)
Query: 524 DVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLI-VFMDIVDFLKPKFVLMENVVDIVKF 582
DV+ GGPPCQG S N+FRN D KQL FM++V +MENV +++
Sbjct: 103 DVVIGGPPCQGFSLLNKFRNGD------PRKQLWRPFMEVVKRSGASVFVMENVPQLLES 156
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWG---AQPTEKLPPYAL-- 637
+ + ++ +M +Q+R + A YG+PQ R R F+ G P PP
Sbjct: 157 HEYVEIKHVAH---EMGFQIRKAKLCAADYGVPQIRWRAFIIGCSFTNPAAVFPPKKTNF 213
Query: 638 -PTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIP 693
P + R EF+ +Y E ++DAISDLP E RD IP
Sbjct: 214 KPNNG--YRKAFSEEFD----SYTENPHIWKT----VRDAISDLPEPVGTEVRDAIP 260
>gi|218900598|ref|YP_002449009.1| modification methylase HaeIII [Bacillus cereus G9842]
gi|218544695|gb|ACK97089.1| modification methylase HaeIII [Bacillus cereus G9842]
Length = 313
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 78/163 (47%), Gaps = 16/163 (9%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
D D++ GG PCQG S N R+ D DE+N + + ++ +PKF + ENV I+
Sbjct: 64 DGDIVIGGFPCQGFSVANMNRSVD----DERNTLYLEMLRVIQDKQPKFFVAENVKGILS 119
Query: 582 FAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHD 641
KG + + Y V+ ++ A YG+PQ R RVF+ G + L Y+ PT
Sbjct: 120 LGKGAVIKMICKDFENAGYNVQYKLLNAADYGVPQTRQRVFIVGVRKDLDL-TYSYPT-- 176
Query: 642 VVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVD 684
PT E T +D L + + + +A+SD+P D
Sbjct: 177 -------PTHEESPT--FDLFNLNALQKWVTIGEALSDIPEPD 210
>gi|420485505|ref|ZP_14984123.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-4]
gi|420515995|ref|ZP_15014458.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-4c]
gi|420517700|ref|ZP_15016154.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-4d]
gi|393103640|gb|EJC04203.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-4]
gi|393123199|gb|EJC23668.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-4d]
gi|393124294|gb|EJC24762.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-4c]
Length = 351
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 82/189 (43%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ ++D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFVFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + Y + ++ A YG+PQ R RV L GA + K Y
Sbjct: 121 QKGQLFQRICNAFKERGYILEHAILNALDYGVPQIRERVILVGALKSFKQKFY------- 173
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + E+ D + Y + + F
Sbjct: 174 -FPKPIKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNVF 213
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 214 LEFVRNSKE 222
>gi|330991509|ref|ZP_08315460.1| Modification methylase DdeI [Gluconacetobacter sp. SXCC-1]
gi|329761528|gb|EGG78021.1| Modification methylase DdeI [Gluconacetobacter sp. SXCC-1]
Length = 449
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 98/217 (45%), Gaps = 48/217 (22%)
Query: 512 FKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFV 571
+ S++ + G VD++ GGPPCQG S R R+ D+P +++ + ++DIV ++P+ V
Sbjct: 101 YTSQLAAMAGSVDLLAGGPPCQGFSTNGR-RDPDDP----RSRMVEAYLDIVALVRPRLV 155
Query: 572 LMENVVDIVKFAKGLLGRYALA---RLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQP 628
L+ENV G YA A RL + Y ++ A ++G+PQ R R A
Sbjct: 156 LLENVRGFQSMPHAGGGTYATATRERLSSLGYDSWADVLIASSWGVPQRRPRYICIAA-- 213
Query: 629 TEKLPPYALPTHDVVLRGVIP--TEFERNTVAYDEGQQAELARKLL------LQDAISDL 680
LRG P ER G++ LAR+ L + DA+SDL
Sbjct: 214 ---------------LRGSFPGINPLER----LKTGRREFLARRGLGPGETSVADALSDL 254
Query: 681 PSVDNYESRD---EIP-------YDREPETEFQCFIR 707
VD SRD E P D E T +Q +R
Sbjct: 255 -IVDPNVSRDTKWEAPGYPGIMRVDPESPTAYQQLMR 290
>gi|157412795|ref|YP_001483661.1| site-specific DNA methylase [Prochlorococcus marinus str. MIT 9215]
gi|157387370|gb|ABV50075.1| Site-specific DNA methylase [Prochlorococcus marinus str. MIT 9215]
Length = 698
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 89/197 (45%), Gaps = 34/197 (17%)
Query: 521 GDVDVICGGPPCQGVSGFNRFRNKD-------NPLADEKNKQLIVFMDIVDFLKPKFVLM 573
G++ +I GGPPCQ S ++R + + L +++ + F+ IV+ +KPK LM
Sbjct: 119 GEISLIAGGPPCQPFSRNIKWRKHNEEVSAQHHELNEDRRELWESFISIVEQVKPKAFLM 178
Query: 574 ENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLP 633
ENV DI + + + R + R + Y++ ++ A YG+PQ R R+F+ G + E P
Sbjct: 179 ENVTDIAQTGEQEIYRSIINRAEKAGYRINPKLIYAWQYGVPQLRPRLFISGTKINECAP 238
Query: 634 -PYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDN--YESRD 690
+ P +D V V L +AISDLP + E D
Sbjct: 239 MKWPKPKYDSVEEAVT------------------------LDEAISDLPPLTGGWNEKWD 274
Query: 691 EIPYDREPETEFQCFIR 707
E P ++Q +R
Sbjct: 275 EKFSYEGPTNDYQKLMR 291
>gi|346973695|gb|EGY17147.1| modification methylase AgeI [Verticillium dahliae VdLs.17]
Length = 1411
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 65/128 (50%), Gaps = 7/128 (5%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIV-FMDIVDFLKPKFVLMEN 575
+P G+VD + GG PC GF+R KN+ L+ F +D +PK+ L+EN
Sbjct: 857 VPAVGEVDFVSGGSPC---PGFSRLTVDKTTPNQRKNQSLVAAFASFIDMYRPKYGLLEN 913
Query: 576 VVDIVKFAKGL---LGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKL 632
VV+I++ K + + ++ M YQ ++ A +G PQ R R+FL A P +L
Sbjct: 914 VVEIIQGRKTREEDVFCQLICAIVGMGYQTHFFLLDAWTFGSPQSRSRIFLAFAAPGLRL 973
Query: 633 PPYALPTH 640
P + +H
Sbjct: 974 PEVPMQSH 981
>gi|119493084|ref|ZP_01624009.1| C-5 cytosine-specific DNA methylase [Lyngbya sp. PCC 8106]
gi|119452829|gb|EAW34004.1| C-5 cytosine-specific DNA methylase [Lyngbya sp. PCC 8106]
Length = 441
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 79/171 (46%), Gaps = 28/171 (16%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
D+DV+ GGPPCQG S + L D +N + F+ IV LKPKF + ENV +
Sbjct: 83 DIDVVFGGPPCQGFSLMGK-----RLLEDPRNLLVFHFVRIVAELKPKFFVFENVKGMAS 137
Query: 582 -----FAKGLLGRY-ALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPY 635
F + L+ ++ +Q YQV + A YG+PQ R R+FL G + LP Y
Sbjct: 138 GKHQNFIQELINKFEYYGYQVQQPYQV----LNAAYYGVPQKRERLFLLGCREDLALPNY 193
Query: 636 ALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNY 686
PT V + + L +++A+ DLP ++NY
Sbjct: 194 PEPTFQPPYSQV-------------AKRYSHLPPTPTVREALQDLPKIENY 231
>gi|420478963|ref|ZP_14977615.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-34]
gi|393096518|gb|EJB97116.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-34]
Length = 351
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 82/189 (43%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ ++D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFIFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + Y + ++ A YG+PQ R RV L GA + K Y
Sbjct: 121 QKGQLFQRICNAFKERGYILEHAILNALDYGVPQVRERVILVGALKSFKQKFY------- 173
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + E+ D + Y + + F
Sbjct: 174 -FPKPIKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNVF 213
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 214 LEFVRNSKE 222
>gi|385266921|ref|ZP_10045008.1| DNA (cytosine-5-)-methyltransferase [Bacillus sp. 5B6]
gi|385151417|gb|EIF15354.1| DNA (cytosine-5-)-methyltransferase [Bacillus sp. 5B6]
Length = 377
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 87/195 (44%), Gaps = 34/195 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
VD++ GGPPCQG F+ ++D + D +N + + V KPK L+ENV I
Sbjct: 75 VDIVIGGPPCQG---FSLTGSRD--INDTRNTLYLAVVKAVRRFKPKAFLIENVPGIATL 129
Query: 583 AKGLLGRYALARLIQMNYQVRMGM--MAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTH 640
G++ + + M Y V + + A YG+PQ R R+F G + + PTH
Sbjct: 130 YNGIVKQQIINTFEDMGYNVSVSPKPLLAADYGVPQMRKRMFFVGIEKGYGSFEFPEPTH 189
Query: 641 DVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPET 700
R + +AISDLPS D + Y+++P++
Sbjct: 190 TP-------------------------ERYVTCSEAISDLPSRDEEFGEEVDNYEKKPQS 224
Query: 701 EFQCFIRLRKDGKKL 715
+Q F +R++ KKL
Sbjct: 225 LYQEF--MRQNSKKL 237
>gi|421721497|ref|ZP_16160772.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R055a]
gi|407224832|gb|EKE94607.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R055a]
Length = 351
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 81/189 (42%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ ++D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKMFVFENVVSLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + Y + ++ A YG+PQ R RV L GA K Y
Sbjct: 121 QKGQLFKQICNAFKERGYILEHAILNALDYGVPQIRERVILVGALKRFKQKFY------- 173
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + E+ D + Y + + F
Sbjct: 174 -FPKPIKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNVF 213
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 214 LEFVRNSKE 222
>gi|46019826|emb|CAE52348.1| putative cytosine-specific methyltransferase [Streptococcus
thermophilus]
Length = 365
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 83/187 (44%), Gaps = 30/187 (16%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+DVI GPPCQG F+ ++D + D +NK + + V KPK L+ENV +
Sbjct: 74 IDVIIAGPPCQG---FSLTGSRD--INDSRNKLYVAVVHAVKHFKPKAFLIENVPGMATL 128
Query: 583 AKGLLGRYALARLIQMNYQVRMG--MMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTH 640
KG + + + Y V + + A YG+PQ R R+F G + + P
Sbjct: 129 YKGKVKEQIINTFEDLGYAVSVTDKPLLAADYGVPQIRKRMFFVGYRKDLNYEYFKFP-- 186
Query: 641 DVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPET 700
T+ D + + DAISDLP++ + + +PY EP++
Sbjct: 187 -------------EPTLTPD--------KHIGTADAISDLPALVDELGEENVPYHMEPQS 225
Query: 701 EFQCFIR 707
E+Q +R
Sbjct: 226 EYQRLMR 232
>gi|226293429|gb|EEH48849.1| DNA methyltransferase Dim-2 [Paracoccidioides brasiliensis Pb18]
Length = 1311
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 75/144 (52%), Gaps = 10/144 (6%)
Query: 504 IKEFVTHGFKSK-----ILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIV 558
+ +F+ F+ K ++ GDV+ I G PCQG S N K+N ++ + +
Sbjct: 790 VNDFLLRAFQGKSEDNNLVAKLGDVEFISAGSPCQGYSSVNSC--KENEVSMRNSSMIAS 847
Query: 559 FMDIVDFLKPKFVLMENVVDIVKFA--KGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQ 616
VDF +PK+ ++ENV+ + + K L + L + M YQ+R+ + A ++G PQ
Sbjct: 848 VASYVDFFRPKYAILENVIMMSNRSNKKNPLCQL-LCAFVGMGYQLRILNLDAWSFGAPQ 906
Query: 617 FRMRVFLWGAQPTEKLPPYALPTH 640
R R+F++ A P +LP + TH
Sbjct: 907 SRSRLFIFIAVPGLQLPAHPPLTH 930
>gi|126657178|ref|ZP_01728344.1| C-5 cytosine-specific DNA methylase [Cyanothece sp. CCY0110]
gi|126621449|gb|EAZ92160.1| C-5 cytosine-specific DNA methylase [Cyanothece sp. CCY0110]
Length = 433
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 76/166 (45%), Gaps = 24/166 (14%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+DV+ GGPPCQG S + L D +N + F+ +V L+PK+ ++ENV +
Sbjct: 76 IDVVFGGPPCQGFSLMGK-----RSLEDGRNSLVKHFIRLVIELQPKYFIIENVPGMTIG 130
Query: 583 AKGLLGRYALARLIQMNYQVRMGM--MAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTH 640
+ + NYQV+ + A YG+PQ R R+FL GA+
Sbjct: 131 KHKIFLEEIFNEFAKNNYQVKTDYQNLNAANYGVPQLRERLFLLGAK------------- 177
Query: 641 DVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNY 686
+G+I + Y++ L ++DAI DLP V++Y
Sbjct: 178 ----QGLILPNYPNFVTQYNQQDNLFLPTTPNVKDAIQDLPEVNHY 219
>gi|445113595|ref|ZP_21377620.1| DNA (cytosine-5-)-methyltransferase [Prevotella nigrescens F0103]
gi|444841017|gb|ELX68037.1| DNA (cytosine-5-)-methyltransferase [Prevotella nigrescens F0103]
Length = 349
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 81/181 (44%), Gaps = 33/181 (18%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+DV+ GGPPCQG S + K + D +N F+ V+ KPK+ ++ENV +I+
Sbjct: 67 IDVVMGGPPCQGFSQ----KGKRLSINDPRNFLFKQFVRFVEEFKPKYFVLENVPNIITT 122
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
A G + Y+V G++ A +G+PQ R R G ++ LP
Sbjct: 123 ANGFFRNEINGAFNALGYEVCSGVLHAVDFGVPQDRRRAVFIGQLSKLEV---DLP---- 175
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
+ +K ++DAI DLP +++ + +E YD++P T+
Sbjct: 176 ----------------------KPIGKKNTVRDAIYDLPFIESGQGEEESTYDKQPTTDL 213
Query: 703 Q 703
Q
Sbjct: 214 Q 214
>gi|400598697|gb|EJP66406.1| DNA methyltransferase Dim-2 [Beauveria bassiana ARSEF 2860]
Length = 1142
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 71/144 (49%), Gaps = 10/144 (6%)
Query: 504 IKEFVTHGFKSKI---LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIV-F 559
I +F F+ + +P G+VD I GG PC GF++ N A KN+ L+ F
Sbjct: 737 IDDFQRLAFQGRFADNIPQVGEVDFISGGSPC---PGFSQLTNDKETDAQRKNQSLVAAF 793
Query: 560 MDIVDFLKPKFVLMENVVDIVKFAKGL---LGRYALARLIQMNYQVRMGMMAAGAYGLPQ 616
VD +PK+ ++ENV I++ + + + L+ M YQ R+ ++ A + G Q
Sbjct: 794 ASCVDLYRPKYGILENVAGIIQKHQNRGHDVFSQLMCALVGMGYQARLVLLDALSCGSAQ 853
Query: 617 FRMRVFLWGAQPTEKLPPYALPTH 640
R RVF+ A P LP + TH
Sbjct: 854 VRSRVFIIFAAPGWTLPEAPIQTH 877
>gi|255280633|ref|ZP_05345188.1| modification methylase DdeI [Bryantella formatexigens DSM 14469]
gi|255269098|gb|EET62303.1| DNA (cytosine-5-)-methyltransferase [Marvinbryantia formatexigens
DSM 14469]
Length = 378
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 87/187 (46%), Gaps = 24/187 (12%)
Query: 521 GDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIV 580
++DVI GGPPCQG S + R D+P +N ++ I ++P+ + ENV I+
Sbjct: 70 AEIDVITGGPPCQGFSLAGQ-RLSDDP----RNTLFREYVRIAADIRPRVLFFENVHGIM 124
Query: 581 KFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTH 640
G + + + ++ YQ + ++ A YG+PQ R R L G + +K + PTH
Sbjct: 125 NMQNGRVLKAIVTEFEKIGYQCKYNLVNAADYGVPQARPRFVLIGIRGFDKKITFPQPTH 184
Query: 641 DVVLRGVIPTEFERNTVAYDEGQQAELARKLL----LQDAISDLPSVDNYESRDEIPYDR 696
+N + GQ R+LL + DA S+LP V+ E +++
Sbjct: 185 G------------KNE---ESGQMNLFKRELLPYVTVNDAFSNLPVVNQGEGAEKMKMRN 229
Query: 697 EPETEFQ 703
+ +FQ
Sbjct: 230 HYDNDFQ 236
>gi|385229774|ref|YP_005789690.1| type II DNA modification methyltransferase [Helicobacter pylori
Puno135]
gi|344336212|gb|AEN18173.1| type II DNA modification methyltransferase [Helicobacter pylori
Puno135]
Length = 351
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 81/189 (42%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ ++D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKMFVFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + Y + ++ A YG+PQ R RV L GA K Y
Sbjct: 121 QKGQLFKQICNAFKERGYILEHAILNALDYGVPQIRERVILVGALKRFKQKFY------- 173
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + E+ D + Y + + F
Sbjct: 174 -FPKPIKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNVF 213
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 214 LEFVRNSKE 222
>gi|208434021|ref|YP_002265687.1| cytosine specific DNA methyltransferase [Helicobacter pylori G27]
gi|208431950|gb|ACI26821.1| cytosine specific DNA methyltransferase (putative type II)
[Helicobacter pylori G27]
Length = 281
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 90/192 (46%), Gaps = 35/192 (18%)
Query: 525 VICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAK 584
+I GGPPCQG S + K+ L D +N + +++IV +KP+ ++ENV +++ AK
Sbjct: 1 MIIGGPPCQGFSN----KGKNLGLKDPRNFLFLEYIEIVKAIKPEIFIIENVKNLISCAK 56
Query: 585 GLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVL 644
G RL + YQ+ ++ YG+PQ R R F+ GA
Sbjct: 57 GYFLEEIKERLNALGYQLSYQILNVKDYGVPQNRERAFIVGA------------------ 98
Query: 645 RGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQC 704
+ ++D + E ++ + +QDAISDL + + E E Y ++ +Q
Sbjct: 99 ----------SRFSFD-FKLLEPSQSVNVQDAISDLAYLCSNEGAFESDYLNPIQSNYQA 147
Query: 705 FIRLRKDGKKLW 716
+RKD KL+
Sbjct: 148 L--MRKDSPKLY 157
>gi|334117372|ref|ZP_08491463.1| DNA-cytosine methyltransferase [Microcoleus vaginatus FGP-2]
gi|333460481|gb|EGK89089.1| DNA-cytosine methyltransferase [Microcoleus vaginatus FGP-2]
Length = 420
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
++DV+ G PCQG S + R+ D+P +N + F +V LKPKF +MENV I
Sbjct: 78 EIDVVISGSPCQGFSMMGK-RDVDDP----RNSLIFHFQRLVLELKPKFFVMENVPGIAS 132
Query: 582 FAKGLLGRYALARLIQMNYQV--RMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPT 639
L ++ ++ Y+V ++ A YG+PQ R R+FL G + +LP Y P
Sbjct: 133 GEHKELLNILISSFMEAGYKVEENYQVLNAVHYGVPQARKRLFLIGCKKDYELPKY--PQ 190
Query: 640 HDVVL-RGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNY 686
+L R +P +++ L + DAI DLP V+ Y
Sbjct: 191 QTTILPRIKVPKRYKK----------VNLPAVPTVWDAIGDLPEVEKY 228
>gi|34451616|gb|AAQ72364.1| methylase fusion protein [Geobacillus stearothermophilus]
Length = 1007
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 56/102 (54%), Gaps = 5/102 (4%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
DVD+ICGGPPCQG S R D+P +N+ F++IV +KPK ++ ENV I+
Sbjct: 841 DVDIICGGPPCQGFS-MAGLRLTDDP----RNQLFKEFIEIVSRVKPKVIVFENVEGILS 895
Query: 582 FAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFL 623
F G + R L ++ Y + + Y +PQ R RVF+
Sbjct: 896 FQSGKVYRAILEMFSEIGYFTEGRTLMSSDYAVPQKRKRVFI 937
>gi|421711470|ref|ZP_16150813.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R030b]
gi|407212619|gb|EKE82481.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R030b]
Length = 351
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 83/189 (43%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ ++D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFVFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + Y + ++ A YG+PQ R RV L GA + K + P
Sbjct: 121 QKGQLFQRICNAFKERGYILEHAILNALDYGVPQIRERVILVGALKSFK-QKFHFPK--- 176
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + E+ D + Y + + F
Sbjct: 177 ----PIKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNVF 213
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 214 LEFVRNSKE 222
>gi|340518715|gb|EGR48955.1| predicted protein [Trichoderma reesei QM6a]
Length = 1044
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 66/129 (51%), Gaps = 9/129 (6%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIV-FMDIVDFLKPKFVLMEN 575
+PL GDVD + GG PC GF+R N A KN+ L+ F VD +PK+ ++EN
Sbjct: 703 VPLIGDVDFVSGGSPC---PGFSRLTNDKTTAAQRKNQSLVAAFASFVDLYRPKYGVLEN 759
Query: 576 VVDIVKFAKGLLGRYALARLI----QMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEK 631
V +V K R ++LI + YQ + + A + G PQ R R+F+ A P +
Sbjct: 760 VPGMVH-KKHDRDRDVFSQLICALVGLGYQTQFFYLDASSCGSPQRRSRIFIVFAAPGLE 818
Query: 632 LPPYALPTH 640
LP + TH
Sbjct: 819 LPDKPVQTH 827
>gi|434393274|ref|YP_007128221.1| DNA-cytosine methyltransferase [Gloeocapsa sp. PCC 7428]
gi|428265115|gb|AFZ31061.1| DNA-cytosine methyltransferase [Gloeocapsa sp. PCC 7428]
Length = 427
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 88/196 (44%), Gaps = 49/196 (25%)
Query: 501 GEKIKEFVTHGFKSK----ILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQL 556
G+ I+E T ++S I G +D++ GGPPCQG S + L DE+N +
Sbjct: 71 GDVIREAATCAYRSHYPQAISSWDGRIDLVFGGPPCQGFSIMGK-----RSLDDERNNLV 125
Query: 557 IVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYAL------ARLIQMNYQVRMGMMAAG 610
F +V L P + +MENV + +G+Y L + Q YQV + ++ A
Sbjct: 126 FHFYRLVTELSPSYFVMENVPGMA------IGQYKLWCAQLKTQFEQAGYQVEVQILNAA 179
Query: 611 AYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARK 670
+G+PQ R R+F G+Q + + P +LP L
Sbjct: 180 DFGVPQRRRRLFFLGSQ--QGVTPVSLPKPYSTL-------------------------- 211
Query: 671 LLLQDAISDLPSVDNY 686
+ ++DAI+DLP V+ +
Sbjct: 212 ITVKDAIADLPDVEEF 227
>gi|123967970|ref|YP_001008828.1| DNA-cytosine methyltransferase [Prochlorococcus marinus str.
AS9601]
gi|123198080|gb|ABM69721.1| DNA-cytosine methyltransferase [Prochlorococcus marinus str.
AS9601]
Length = 698
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 94/197 (47%), Gaps = 34/197 (17%)
Query: 521 GDVDVICGGPPCQGVSGFNRFRNKDNPLA------DEKNKQLI-VFMDIVDFLKPKFVLM 573
G++ +I GGPPCQ S ++R + ++ +E ++L F+ IV+ +KPK LM
Sbjct: 119 GEISLIAGGPPCQPFSRNIKWRKHNEEVSAQHQELNEDRRELWESFISIVEQVKPKAFLM 178
Query: 574 ENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLP 633
ENV DI + + + R + R + Y++ ++ A YG+PQ R R+F+ G + E P
Sbjct: 179 ENVTDIAQTGEQEIYRSIINRAEKAGYRINPKLIYAWQYGVPQLRPRLFISGTKINECAP 238
Query: 634 -PYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVD-NYESRDE 691
+ P +D L + L +AISDLP + ++ + +
Sbjct: 239 MKWPKPKYD------------------------SLEEAVTLDEAISDLPPLKGGWDEKWD 274
Query: 692 IPYDRE-PETEFQCFIR 707
Y E P+ ++Q +R
Sbjct: 275 EKYSYEGPKNDYQKLMR 291
>gi|385218742|ref|YP_005780217.1| type II DNA modification (methyltransferase) [Helicobacter pylori
Gambia94/24]
gi|317013900|gb|ADU81336.1| type II DNA modification (methyltransferase) [Helicobacter pylori
Gambia94/24]
Length = 351
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 82/189 (43%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ ++D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFVFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + Y + ++ A YG+PQ R RV L GA + K Y
Sbjct: 121 QKGQLFQRICNAFKERGYILEHAILNALDYGVPQIRERVILVGALKSFKQKFY------- 173
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + E+ D + Y + + F
Sbjct: 174 -FPKPIKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNIF 213
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 214 LEFVRNSKE 222
>gi|420432040|ref|ZP_14931059.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-16]
gi|393049633|gb|EJB50599.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-16]
Length = 351
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 82/189 (43%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ ++D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFVFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + Y + ++ A YG+PQ R RV L GA + K Y
Sbjct: 121 QKGQLFQRICNAFKERGYILEHAILNALDYGVPQIRERVILVGALKSFKQKFY------- 173
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + E+ D + Y + + F
Sbjct: 174 -FPKPIKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNIF 213
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 214 LEFVRNSKE 222
>gi|325564165|gb|ADZ31422.1| M.PsuNI [Pseudomonas stutzeri]
Length = 422
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 91/196 (46%), Gaps = 28/196 (14%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
DVD++ GGPPCQG S + L DE+N+ + IV+ L+P+ LMENV ++
Sbjct: 87 DVDLVFGGPPCQGYSQIGTRK-----LDDERNELYKQYARIVETLRPRVFLMENVPNLAL 141
Query: 582 FAKGLLGRYALARLIQMNYQ-VRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTH 640
KG + L ++ Y+ M +++A + +PQ R RV G + +K P
Sbjct: 142 MNKGHFKKIILKHFAELGYKNTIMLLLSADEFSVPQTRQRVIFIGTRDEDKFP------- 194
Query: 641 DVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPS--VDNYESRDEIPYDREP 698
++ T + R + + +AI DLP+ V + E+ D P R P
Sbjct: 195 -----------YDLQTFCETVLDCYRVERAVTVGEAIGDLPADIVHSGETMD-YPKTRNP 242
Query: 699 ETEFQCFIRLRKDGKK 714
++F +RL DG +
Sbjct: 243 -SQFMKDMRLDFDGPR 257
>gi|420438503|ref|ZP_14937477.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-29]
gi|393056103|gb|EJB57015.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-29]
Length = 351
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 82/189 (43%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ I+D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRILDLVKPKIFVFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + Y + ++ A YG+PQ R RV L GA K + P
Sbjct: 121 QKGQLFQRICNAFKERGYILEHAILNALDYGVPQIRERVILVGALKRFK-QKFHFPK--- 176
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + E+ D + Y + + F
Sbjct: 177 ----PIKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNVF 213
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 214 LEFVRNSKE 222
>gi|9622224|gb|AAF89681.1| cytosine-specific methyltransferase [Bacillus sp. LU11]
Length = 365
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 95/190 (50%), Gaps = 33/190 (17%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
+ DV+ GGPPCQ S + R+ D E+ + + ++ I++ ++PK + ENVV + K
Sbjct: 63 EADVVIGGPPCQSFSLVGKRRSDD-----ERGQLVWQYLRIINEIRPKCFVFENVVGL-K 116
Query: 582 FAKGLLGRYALARLI----QMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYAL 637
AK G L LI ++ Y+V+ ++ A YG+PQ R R+F+ G + K + L
Sbjct: 117 SAKTAEGNLVLDELIIAFREIGYEVQWSVLNAADYGVPQRRKRIFIVGTREGIKF-NFPL 175
Query: 638 PTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDRE 697
PTH+ ++G +L + + +++A+ DLPS + + + Y E
Sbjct: 176 PTHN------------------EKGNDGKL-KWISVEEALGDLPSPN---TDGIVKYSTE 213
Query: 698 PETEFQCFIR 707
P +Q +R
Sbjct: 214 PLNPYQLKMR 223
>gi|428211715|ref|YP_007084859.1| DNA-methyltransferase Dcm [Oscillatoria acuminata PCC 6304]
gi|428000096|gb|AFY80939.1| DNA-methyltransferase Dcm [Oscillatoria acuminata PCC 6304]
Length = 434
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 78/167 (46%), Gaps = 20/167 (11%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
++DV+CGGPPCQG S + R D+P +N + F+ IV L+PK+ +MENV +
Sbjct: 76 EIDVVCGGPPCQGFSLMGK-RALDDP----RNSLVFHFIRIVTELQPKYFVMENVRGLTI 130
Query: 582 FAKGLLGRYALARLIQMNYQVRM--GMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPT 639
L + + YQV ++ + YG+PQ R R+FL G + LP Y
Sbjct: 131 GPHKQLLDEVIDKFHDSGYQVLTPYQVLNSAHYGVPQNRERLFLIGCREGLSLPDY---- 186
Query: 640 HDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNY 686
PT Q ++L + +AI DLP V++Y
Sbjct: 187 ---------PTPITNPPGCKKLRQLSDLPATPTVWEAIQDLPRVEDY 224
>gi|307153788|ref|YP_003889172.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7822]
gi|306984016|gb|ADN15897.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7822]
Length = 424
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 85/176 (48%), Gaps = 29/176 (16%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
D+DV+ GGPPCQG S + R D+P +N + F+ +V L PK+ ++ENV +
Sbjct: 78 DIDVVFGGPPCQGFSLIGK-RLLDDP----RNDLIYHFLRLVLELNPKYFILENVPGMAL 132
Query: 582 FAKGLLGRYALARLIQMNYQV--RMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPT 639
L + + + NY V + ++ A YG+PQ R R+FL G+Q LP Y P
Sbjct: 133 GKHKKLIEEIINKFQENNYNVEENIKILNAAHYGVPQNRERLFLLGSQKGLVLPQYPEPI 192
Query: 640 HDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNY---ESRDEI 692
P F+ L++ + +A+ DLP V++Y E+RD +
Sbjct: 193 -------TAPNPFQ------------NLSKTPTVWEALQDLPEVNHYPELETRDWV 229
>gi|91069833|gb|ABE10765.1| C-5 cytosine-specific DNA methylase [uncultured Prochlorococcus
marinus clone ASNC1092]
Length = 686
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 93/197 (47%), Gaps = 34/197 (17%)
Query: 521 GDVDVICGGPPCQGVSGFNRFRNKDNPLA------DEKNKQLI-VFMDIVDFLKPKFVLM 573
G++ +I GGPPCQ S ++R + ++ +E ++L F+ IV+ +KPK LM
Sbjct: 119 GEISLIAGGPPCQPFSRNIKWRKHNEEVSAQHQELNEDRRELWESFISIVEQVKPKAFLM 178
Query: 574 ENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLP 633
ENV DI + + + R + R + Y++ ++ A YG+PQ R R+F+ G + E P
Sbjct: 179 ENVTDIAQTGEQEIYRSIINRAEKAGYRINPKLIYAWQYGVPQLRPRLFISGTKINECAP 238
Query: 634 -PYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVD-NYESRDE 691
+ P D V V L +AISDLP + ++ + +
Sbjct: 239 MKWPKPKFDSVEEAVT------------------------LDEAISDLPPLKGGWDEKWD 274
Query: 692 IPYDRE-PETEFQCFIR 707
Y E P+ ++Q +R
Sbjct: 275 EKYSYEGPKNDYQKLMR 291
>gi|420471951|ref|ZP_14970647.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-18]
gi|393091306|gb|EJB91938.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-18]
Length = 348
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 81/189 (42%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ ++D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFVFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + Y + ++ A YG+PQ R RV L GA K Y
Sbjct: 121 QKGQLFKQICNAFKERGYILEHAILNALDYGVPQIRERVILVGALKRFKQKFY------- 173
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + E+ D + Y + + F
Sbjct: 174 -FPKPIKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNVF 213
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 214 LEFVRNSKE 222
>gi|281491831|ref|YP_003353811.1| C-5 cytosine-specific DNA methylase [Lactococcus lactis subsp.
lactis KF147]
gi|281375542|gb|ADA65048.1| C-5 cytosine-specific DNA methylase [Lactococcus lactis subsp.
lactis KF147]
Length = 347
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 91/200 (45%), Gaps = 41/200 (20%)
Query: 512 FKSKILPLPGD--VDVICGGPPCQG--VSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLK 567
++ I PL D +D+I GGPPCQG +SG +F D +N + ++ +V ++
Sbjct: 61 YEKDIKPLINDQKIDIIVGGPPCQGMSLSGPRKFE-------DPRNSLYLSYIRLVSEIR 113
Query: 568 PKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQ 627
PK ++ENV + KG + + + +M Y+V ++ A +G+PQ R R+ G Q
Sbjct: 114 PKAFVIENVPGLASLFKGQIKDSIIEKFTEMGYKVNYKILVASDFGVPQKRRRIVFVGLQ 173
Query: 628 PTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYE 687
+ + P G++ TE A+SDLPS+++
Sbjct: 174 --NDVFDFNFPEF-----GMVTTEM-----------------------ALSDLPSLEDEL 203
Query: 688 SRDEIPYDREPETEFQCFIR 707
+E Y +P+ +Q +R
Sbjct: 204 GTEESEYSNKPQNSYQKVMR 223
>gi|448497515|ref|ZP_21610468.1| DNA-cytosine methyltransferase [Halorubrum coriense DSM 10284]
gi|445699746|gb|ELZ51766.1| DNA-cytosine methyltransferase [Halorubrum coriense DSM 10284]
Length = 399
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 95/217 (43%), Gaps = 34/217 (15%)
Query: 431 DGESEEDDDNGNVEDESEDDSEIFEVEKILKICYGDPKEIKKRGLYLKVRWRNYGPSEDT 490
D ++ + D G+ D + DD++ V C G ++ G + + + P+ +T
Sbjct: 6 DADAGPESDAGSESDATSDDADAPVVAGFFSGCGGLDLGFERAGFDVALGSDQWEPAAET 65
Query: 491 W-------EPIEGLSNCGEKIKEFVTHGFKSKILPL---PGDVDVICGGPPCQGVSGFNR 540
+ E +EG ++E + + P VDV+ GGPPCQ GF+R
Sbjct: 66 YRRNFADTEVLEG------DVRELDAPAIRDAVAGAGYDPDGVDVVIGGPPCQ---GFSR 116
Query: 541 FRNK----DNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIV-------KFAKGLLGR 589
N+ D D +N F+ +V L+P+ VLMENV D++ ++ K L+
Sbjct: 117 LNNEQIELDEMEKDRRNTLFEEFLRVVSVLEPRLVLMENVRDLINRQTSDDRYVKDLI-- 174
Query: 590 YALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGA 626
+ Y+ ++ A YG+PQ R R+F G
Sbjct: 175 --VDEFAAHGYKCEYRVLEAEQYGVPQKRRRIFFIGT 209
>gi|420425058|ref|ZP_14924122.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-5]
gi|393043645|gb|EJB44649.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-5]
Length = 298
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 83/189 (43%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ ++D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFVFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + Y + ++ A YG+PQ R RV L GA + K + P
Sbjct: 121 QKGQLFQRICNAFKERGYILEHAILNALDYGVPQVRERVILVGALKSFK-QKFHFPK--- 176
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + E+ D + Y + + F
Sbjct: 177 ----PIKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNVF 213
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 214 LEFVRNSKE 222
>gi|448434340|ref|ZP_21586150.1| DNA-cytosine methyltransferase [Halorubrum tebenquichense DSM
14210]
gi|445685256|gb|ELZ37611.1| DNA-cytosine methyltransferase [Halorubrum tebenquichense DSM
14210]
Length = 392
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 73/160 (45%), Gaps = 29/160 (18%)
Query: 489 DTWEPI-----EGLSNCG---EKIKEFVTHGFKSKILPL---PGDVDVICGGPPCQGVSG 537
D WEP S+ G E ++E + + PG VDV+ GGPPCQ G
Sbjct: 50 DQWEPAAETYRRNFSDVGFVEEDVRELDAAAIRESVERAGYDPGGVDVVIGGPPCQ---G 106
Query: 538 FNRFRNK----DNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIV-------KFAKGL 586
F+R N+ D D +N F+ +V L+P+ VLMENV D++ ++ K L
Sbjct: 107 FSRLNNEQIELDEMEKDRRNTLFEEFLRVVSVLEPQLVLMENVRDLINRQTSDDRYVKDL 166
Query: 587 LGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGA 626
+ + Y+ ++ A YG+PQ R R+F G
Sbjct: 167 I----VDEFAAHGYKCEYRVLEAEQYGVPQKRRRIFFMGT 202
>gi|420490495|ref|ZP_14989081.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-13]
gi|420524322|ref|ZP_15022732.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-13b]
gi|393109838|gb|EJC10369.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-13]
gi|393133481|gb|EJC33898.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-13b]
Length = 351
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 82/189 (43%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ ++D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFVFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + Y + ++ A YG+PQ R RV L GA + K Y
Sbjct: 121 QKGQLFQRICNAFKERGYILEHAILNALDYGVPQVRERVILVGALKSFKQKFY------- 173
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + E+ D + Y + + F
Sbjct: 174 -FPKPIKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNIF 213
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 214 LEFVRNSKE 222
>gi|346322860|gb|EGX92458.1| DNA methyltransferase Dim-2 [Cordyceps militaris CM01]
Length = 1182
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 63/128 (49%), Gaps = 7/128 (5%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIV-FMDIVDFLKPKFVLMEN 575
+P G+VD I GG PC G S R D KN+ L+ F VD +PK+ ++EN
Sbjct: 762 VPRIGEVDFISGGSPCPGFSTMTNDRTTD---PQRKNQSLVAAFASCVDLYRPKYGILEN 818
Query: 576 VVDIVKFAKGL---LGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKL 632
V+ I++ + + + L+ M YQ R+ + A + G Q R RVF+ A P L
Sbjct: 819 VMGIIQSCRDRDQDVFSQLMCALVGMGYQARLFFLDALSCGSAQMRSRVFIVFAAPGWTL 878
Query: 633 PPYALPTH 640
P L TH
Sbjct: 879 PEKPLQTH 886
>gi|448671300|ref|ZP_21687239.1| C-5 cytosine-specific DNA methylase [Haloarcula amylolytica JCM
13557]
gi|445765903|gb|EMA17040.1| C-5 cytosine-specific DNA methylase [Haloarcula amylolytica JCM
13557]
Length = 392
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 60/108 (55%), Gaps = 5/108 (4%)
Query: 520 PGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDI 579
P DVDV+ GGPPCQG+S R+ D+P +N L+ F+D VD P ++ENV ++
Sbjct: 69 PDDVDVVIGGPPCQGLSSAGH-RDPDDP----RNTLLLWFLDYVDATSPDAFVIENVREL 123
Query: 580 VKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQ 627
L L+R ++ ++ ++ A +G+PQ R RVF+ G +
Sbjct: 124 TWDRNADLFDALLSRADELGFETEYQILTASDFGVPQKRKRVFVVGVR 171
>gi|420440236|ref|ZP_14939193.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-30]
gi|393056884|gb|EJB57793.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-30]
Length = 351
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 81/189 (42%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ I+D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRILDLVKPKIFVFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + Y + ++ YG+PQ R RV L GA + K Y
Sbjct: 121 QKGQLFQRICNAFKERGYILEHAILNTLDYGVPQIRERVILVGALKSFKQKFY------- 173
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + E+ D + Y + + F
Sbjct: 174 -FPKPIKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNVF 213
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 214 LEFVRNSKE 222
>gi|225684039|gb|EEH22323.1| DNA methyltransferase Dim-2 [Paracoccidioides brasiliensis Pb03]
Length = 1336
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 75/144 (52%), Gaps = 10/144 (6%)
Query: 504 IKEFVTHGFKSK-----ILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIV 558
+ +F+ F+ K ++ GDV+ I G PCQG S N K+N ++ + +
Sbjct: 815 VNDFLLRAFQGKSEDNNLVAKLGDVEFISAGSPCQGYSSVNSC--KENEVSMRNSSMIAS 872
Query: 559 FMDIVDFLKPKFVLMENVVDIVKFA--KGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQ 616
VDF +PK+ ++ENV+ + + K L + L + M YQ+R+ + A ++G PQ
Sbjct: 873 VASYVDFFRPKYAILENVIMMSNRSNKKNPLCQL-LCAFVGMGYQLRILNLDAWSFGAPQ 931
Query: 617 FRMRVFLWGAQPTEKLPPYALPTH 640
R R+F++ A P +LP + TH
Sbjct: 932 SRSRLFIFIAVPGLQLPAHPPLTH 955
>gi|217033040|ref|ZP_03438509.1| hypothetical protein HPB128_193g7 [Helicobacter pylori B128]
gi|298736593|ref|YP_003729119.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori B8]
gi|216945239|gb|EEC23921.1| hypothetical protein HPB128_193g7 [Helicobacter pylori B128]
gi|298355783|emb|CBI66655.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori B8]
Length = 351
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 84/189 (44%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
++++ GGPPCQ S + + DEK ++ ++D +KPK + ENVV ++
Sbjct: 67 INILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFVFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + +Y + ++ A YG+PQ R RV L GA + K + P
Sbjct: 121 QKGQLFKQICNAFKERDYILEHAILNALDYGVPQIRERVILVGALKSFK-QKFHFPK--- 176
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + E+ D + Y + + F
Sbjct: 177 ----PIKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNVF 213
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 214 LEFVRNSKE 222
>gi|420522621|ref|ZP_15021045.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-11b]
gi|393129578|gb|EJC30012.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-11b]
Length = 326
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 82/189 (43%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ ++D +KPK + ENVV ++
Sbjct: 42 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFVFENVVGLMSM 95
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + Y + ++ A YG+PQ R RV L G + K + P
Sbjct: 96 QKGQLFQRICNAFKERGYILEHAILNALDYGVPQIRERVILVGIHKSFK-QKFHFPK--- 151
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + E+ D + Y + + F
Sbjct: 152 ----PIKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNVF 188
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 189 LEFVRNSKE 197
>gi|420519255|ref|ZP_15017699.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp H-5b]
gi|393128347|gb|EJC28791.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp H-5b]
Length = 351
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 82/189 (43%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ I+D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRILDLVKPKIFVFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + Y + ++ A YG+PQ R RV L GA K + P
Sbjct: 121 QKGQLFQRICNAFKERGYILEHAILNALDYGVPQVRERVILVGALKRFK-QKFHFPK--- 176
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + E+ D + Y + + F
Sbjct: 177 ----PIKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNVF 213
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 214 LEFVRNSKE 222
>gi|423314738|ref|ZP_17292671.1| DNA (cytosine-5-)-methyltransferase [Bacteroides vulgatus
CL09T03C04]
gi|392681485|gb|EIY74843.1| DNA (cytosine-5-)-methyltransferase [Bacteroides vulgatus
CL09T03C04]
Length = 388
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 90/189 (47%), Gaps = 28/189 (14%)
Query: 513 KSKILPLPGD--VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKF 570
K KI GD VDVI GGPPCQG S + +R+ + D++N+ F+DIV LKPKF
Sbjct: 198 KQKIYEACGDNKVDVILGGPPCQGFS-YAGWRDPN----DQRNQLFRDFVDIVTTLKPKF 252
Query: 571 VLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGM-MAAGAYGLPQFRMRVFLWG-AQP 628
+MENV I+ KG + + Y V + + A YG+PQ R RV L G ++
Sbjct: 253 FVMENVPGILTMRKGEAIKEIIQAFADAGYHVGTPLKLTAADYGVPQKRKRVILIGCSEN 312
Query: 629 TEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYES 688
E P L T G+ P L + + +++AI P++ +
Sbjct: 313 IEIYQPEPLFTDKP--NGLFP-----------------LPQYITVREAIGSFPAIPDGGG 353
Query: 689 RDEIPYDRE 697
DE+ ++ E
Sbjct: 354 DDEMEFEIE 362
>gi|420488940|ref|ZP_14987537.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-11]
gi|393107690|gb|EJC08230.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-11]
Length = 351
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 82/189 (43%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ ++D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFVFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + Y + ++ A YG+PQ R RV L G + K + P
Sbjct: 121 QKGQLFQRICNAFKERGYILEHAILNALDYGVPQIRERVILVGIHKSFK-QKFHFPK--- 176
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + E+ D + Y + + F
Sbjct: 177 ----PIKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNVF 213
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 214 LEFVRNSKE 222
>gi|420470231|ref|ZP_14968941.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-11]
gi|393086356|gb|EJB87033.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-11]
Length = 348
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 81/189 (42%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ ++D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFIFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + Y + ++ A YG+PQ R RV L GA K Y
Sbjct: 121 QKGQLFQQICNAFKERGYILEHAILNALDYGVPQIRERVILVGALKRFKQKFY------- 173
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + E+ D + Y + + F
Sbjct: 174 -FPKPIKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNVF 213
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 214 LEFVRNSKE 222
>gi|420458340|ref|ZP_14957150.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-26]
gi|393075861|gb|EJB76615.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-26]
Length = 351
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 81/189 (42%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ ++D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFVFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + Y + ++ A YG+PQ R RV L GA K Y
Sbjct: 121 QKGQLFQQICNAFKERGYILEHAILNALDYGVPQIRERVILVGALKRFKQKFY------- 173
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + E+ D + Y + + F
Sbjct: 174 -FPKPIKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNVF 213
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 214 LEFVRNSKE 222
>gi|295664785|ref|XP_002792944.1| DNA methyltransferase Dim-2 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226278465|gb|EEH34031.1| DNA methyltransferase Dim-2 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1371
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 66/122 (54%), Gaps = 5/122 (4%)
Query: 521 GDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIV 580
GDV+ I G PCQG S N K+N ++ + + VDF +PK+ ++ENV+ +
Sbjct: 872 GDVEFISAGSPCQGYSSVNSC--KENEVSMRNSSMIASVASYVDFFRPKYAILENVIMMS 929
Query: 581 KFA--KGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALP 638
+ K L + L + M YQ+R+ + A ++G PQ R R+F++ A P +LP +
Sbjct: 930 NRSNKKNPLCQL-LCAFVGMGYQLRILNLDAWSFGAPQSRSRLFIFIAAPGLQLPAHPPL 988
Query: 639 TH 640
TH
Sbjct: 989 TH 990
>gi|428300014|ref|YP_007138320.1| Xre family transcriptional regulator [Calothrix sp. PCC 6303]
gi|428236558|gb|AFZ02348.1| transcriptional regulator, XRE family [Calothrix sp. PCC 6303]
Length = 484
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 88/184 (47%), Gaps = 8/184 (4%)
Query: 525 VICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAK 584
VI GGPPCQG S FRN + D +N F IV L+P++++ ENVV ++ +
Sbjct: 182 VIVGGPPCQGFSSIRPFRNIER--NDPRNNLAEEFCRIVHNLQPEWIVFENVVGLLTHSN 239
Query: 585 GLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVL 644
G + + ++ Y+ ++ A YGLPQ R R+ + G++ + + PTH
Sbjct: 240 GKTFQTIVEAFEEIGYRTAAKVLNAAYYGLPQCRERLIIVGSRAGKPF-KWTQPTHWCEH 298
Query: 645 RGVIP-TEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQ 703
R + EF + +G +L + + +AI DLP V+ D E T ++
Sbjct: 299 RSMAGRQEF---ILKPSKGLIQDLQSAITVDEAIHDLPEVEAGGRATTYQCDIE-STPYE 354
Query: 704 CFIR 707
FIR
Sbjct: 355 LFIR 358
>gi|453067043|ref|ZP_21970333.1| modification methylase [Rhodococcus qingshengii BKS 20-40]
gi|452767430|gb|EME25670.1| modification methylase [Rhodococcus qingshengii BKS 20-40]
Length = 431
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 8/139 (5%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
++DV+ GGPPCQG S R R++D+P +N +++ D ++PK V+MENV ++
Sbjct: 158 NIDVLAGGPPCQGFSLAGR-RDRDDP----RNHLFRNLLELADLVRPKVVVMENVRLLLS 212
Query: 582 FA---KGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALP 638
G++ L + Y + + A YG+PQFR RVF+ + + P P
Sbjct: 213 MKDPDGGMVVDRILGEMAACGYDASVNTVNAQDYGVPQFRERVFIVATRRDSGIGPLRFP 272
Query: 639 THDVVLRGVIPTEFERNTV 657
+ GV P R+
Sbjct: 273 PKTHGVNGVAPLRTFRDAT 291
>gi|188527268|ref|YP_001909955.1| type II DNA modification methyltransferase [Helicobacter pylori
Shi470]
gi|188143508|gb|ACD47925.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori Shi470]
Length = 348
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 82/189 (43%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ ++D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKMFVFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + Y + ++ A YG+PQ R RV L G + K + P
Sbjct: 121 QKGQLFKQICNAFKERGYVLEHAILNALDYGVPQIRERVILVGVLKSFK-QKFHFPK--- 176
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + E+ D + Y + + F
Sbjct: 177 ----PIKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNVF 213
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 214 LEFVRNSKE 222
>gi|226186551|dbj|BAH34655.1| putative modification methylase [Rhodococcus erythropolis PR4]
Length = 444
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 8/139 (5%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
D+DV+ GGPPCQG S R R++D+P +N + + + +KPK ++MENV ++
Sbjct: 171 DIDVLAGGPPCQGFSLAGR-RDRDDP----RNHLFRNLLQLAELVKPKVLVMENVRLLLS 225
Query: 582 FA---KGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALP 638
G++ L + Y + + A YG+PQFR RVF+ + + P P
Sbjct: 226 MKDPDGGMVVDRILGEMAACGYDASVNTVNAQDYGVPQFRERVFIVATRRDSSIGPLRFP 285
Query: 639 THDVVLRGVIPTEFERNTV 657
+ GV P R+
Sbjct: 286 PKTHGVNGVAPLRTFRDAT 304
>gi|420487096|ref|ZP_14985704.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-8]
gi|420520981|ref|ZP_15019412.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-8b]
gi|393104649|gb|EJC05206.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-8]
gi|393127568|gb|EJC28013.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-8b]
Length = 351
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 81/189 (42%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ I+D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRILDLVKPKIFVFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + Y + ++ A YG+PQ R RV L G + K Y
Sbjct: 121 QKGQLFQRICNAFKERGYILEHAILNALDYGVPQVRERVILVGVLKSFKQKFY------- 173
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + E+ D + Y + + F
Sbjct: 174 -FPKPIKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNVF 213
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 214 LEFVRNSKE 222
>gi|420466783|ref|ZP_14965540.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-9]
gi|393085181|gb|EJB85869.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-9]
Length = 351
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 81/189 (42%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ ++D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFVFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + Y + ++ A YG+PQ R RV L GA K Y
Sbjct: 121 QKGQLFQQICNAFKERGYILEHAILNALDYGVPQIRERVILVGALKRFKQKFY------- 173
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + E+ D + Y + + F
Sbjct: 174 -FPKPIKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNVF 213
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 214 LEFVRNSKE 222
>gi|256419690|ref|YP_003120343.1| DNA-cytosine methyltransferase [Chitinophaga pinensis DSM 2588]
gi|256034598|gb|ACU58142.1| DNA-cytosine methyltransferase [Chitinophaga pinensis DSM 2588]
Length = 390
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 89/196 (45%), Gaps = 32/196 (16%)
Query: 521 GDVDVICGGPPCQGVSGFNRFRNK--DNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVD 578
G D+I GGPPCQG S F K D + D++N+Q+ F+ + +KPK LMENV
Sbjct: 75 GKPDIIVGGPPCQGFS----FAGKRLDEYMHDKRNEQVFHFLRFIKEIKPKAFLMENVAG 130
Query: 579 IV---KFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPY 635
I + KG L Y + +M Y ++ + Y +PQ R R L G +K
Sbjct: 131 IRVTGQQKKGQLIDYLIEEYEKMGYATSWQVVNSADYRVPQNRKRFMLVGVLKGKKFIFP 190
Query: 636 ALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYD 695
P D L G G++ +L + DA+SDLPS ++ E + +
Sbjct: 191 EAPIQDNNLFG---------------GEE-----RLTVYDALSDLPSPNHEEPQL---HT 227
Query: 696 REPETEFQCFIRLRKD 711
+P T Q F+R D
Sbjct: 228 IQPLTPLQKFLRNETD 243
>gi|420406011|ref|ZP_14905184.1| cytosine-specific methyltransferase [Helicobacter pylori CPY6271]
gi|393021830|gb|EJB22960.1| cytosine-specific methyltransferase [Helicobacter pylori CPY6271]
Length = 281
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 88/192 (45%), Gaps = 35/192 (18%)
Query: 525 VICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAK 584
+I GG PCQG S + K+ L D +N + +++IV LKP+ ++ENV +++ K
Sbjct: 1 MIIGGSPCQGFSN----KGKNLGLKDPRNFLFLEYIEIVKALKPEIFIIENVKNLISCTK 56
Query: 585 GLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVL 644
G RL + YQ+ ++ A YG+PQ R R F+ GA
Sbjct: 57 GYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFIVGAS----------------- 99
Query: 645 RGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQC 704
F+ N + E ++ + +QDAISDL + + E E Y ++ +Q
Sbjct: 100 ----RFSFDFNLL--------EPSQSVNVQDAISDLAYLCSNEGAFESDYLNPIQSSYQA 147
Query: 705 FIRLRKDGKKLW 716
+RKD KL+
Sbjct: 148 L--MRKDSPKLY 157
>gi|384894068|ref|YP_005768117.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori Sat464]
gi|308063322|gb|ADO05209.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori Sat464]
Length = 348
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 82/189 (43%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ ++D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKMFVFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + Y + ++ A YG+PQ R RV L G + K + P
Sbjct: 121 QKGQLFKQICNAFKERGYVLEHAILNALDYGVPQIRERVILVGVLKSFK-QKFHFPKP-- 177
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + E+ D + Y + + F
Sbjct: 178 -----IKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNVF 213
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 214 LEFVRNSKE 222
>gi|352094116|ref|ZP_08955287.1| DNA-cytosine methyltransferase [Synechococcus sp. WH 8016]
gi|351680456|gb|EHA63588.1| DNA-cytosine methyltransferase [Synechococcus sp. WH 8016]
Length = 680
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 93/198 (46%), Gaps = 30/198 (15%)
Query: 521 GDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLI--------VFMDIVDFLKPKFVL 572
G+V ++ GGPPCQ S R+R D+ + E++K+L F+ +V+ + P+ L
Sbjct: 114 GEVALVAGGPPCQPFSRNIRWRKHDDDVI-EQHKELNEGRRELWESFLTVVEGVMPRAFL 172
Query: 573 MENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQ-PTEK 631
MENV DI + + R ++R Y+V ++ A +G+PQ R R+F+ G + P K
Sbjct: 173 MENVPDIAQTGDQEVFRGIVSRAEAAGYRVHARLVHAWEHGVPQLRPRLFIAGTRLPNAK 232
Query: 632 LPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSV--DNYESR 689
Y P + + E + L + L++AI DLP + D +E
Sbjct: 233 GNSYCSP------------------LVWPEPSCSSLEEAVSLEEAIGDLPELKGDWWEKW 274
Query: 690 DEIPYDREPETEFQCFIR 707
+E R P +Q +R
Sbjct: 275 NETCDYRGPGNAYQKLMR 292
>gi|385249008|ref|YP_005777227.1| Type II DNA modification enzyme [Helicobacter pylori F57]
gi|317181803|dbj|BAJ59587.1| Type II DNA modification enzyme [Helicobacter pylori F57]
Length = 351
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 82/189 (43%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ ++D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKMFVFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + Y + ++ A YG+PQ R RV L G + K + P
Sbjct: 121 QKGQLFKQICNAFKERGYILEHAILNALDYGVPQIRERVILVGVLKSFK-QKFHFPK--- 176
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + E+ D + Y + + F
Sbjct: 177 ----PIKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNVF 213
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 214 LEFVRNSKE 222
>gi|420410013|ref|ZP_14909156.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4200]
gi|393028326|gb|EJB29412.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4200]
Length = 351
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 81/189 (42%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ I+D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRILDLVKPKIFVFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + Y + ++ A YG+PQ R RV L G + K Y
Sbjct: 121 QKGQLFQRICNAFKERGYILEHAILNALDYGVPQVRERVILVGVLKSFKQKFY------- 173
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + E+ D + Y + + F
Sbjct: 174 -FPKPIKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNVF 213
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 214 LEFVRNSKE 222
>gi|384895833|ref|YP_005769822.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori 35A]
gi|315586449|gb|ADU40830.1| possible DNA (cytosine-5-)-methyltransferase [Helicobacter pylori
35A]
Length = 351
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 82/189 (43%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ ++D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKMFVFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + Y + ++ A YG+PQ R RV L G + K + P
Sbjct: 121 QKGQLFKQICNAFKERGYILEHAILNALDYGVPQIRERVILVGVLKSFK-QKFHFPK--- 176
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + E+ D + Y + + F
Sbjct: 177 ----PIKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNVF 213
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 214 LEFVRNSKE 222
>gi|419418098|ref|ZP_13958451.1| type II DNA modification enzyme [Helicobacter pylori NCTC 11637 =
CCUG 17874]
gi|384374751|gb|EIE30122.1| type II DNA modification enzyme [Helicobacter pylori NCTC 11637 =
CCUG 17874]
Length = 348
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 82/189 (43%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ ++D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKMFVFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + Y + ++ A YG+PQ R RV L GA K + P
Sbjct: 121 QKGQLFKQICNAFKERGYILEHAILNALDYGVPQIRERVILVGALKRFK-QKFHFPK--- 176
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + E+ D + Y + + F
Sbjct: 177 ----PIKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNVF 213
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 214 LEFVRNSKE 222
>gi|393245687|gb|EJD53197.1| S-adenosyl-L-methionine-dependent methyltransferase [Auricularia
delicata TFB-10046 SS5]
Length = 829
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 74/177 (41%), Gaps = 19/177 (10%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+ V+ GGPPCQG S NR R+ +DE+N + VD +P + L+ENV ++
Sbjct: 340 IGVLFGGPPCQGFSTLNRHRSP----SDERNLLFANMLSWVDVYRPTYFLLENVGGMLSI 395
Query: 583 AKGL-------------LGRYALAR--LIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQ 627
L G L L + YQ R+ + AG YG PQ R R+ ++G +
Sbjct: 396 KLRLELAEKDHPAVDVEFGTVKLIVRVLAALGYQARVHYLQAGMYGAPQSRHRLVIFGCR 455
Query: 628 PTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVD 684
+LP TH R + + + L DAI DLP+ D
Sbjct: 456 LGTELPIAPHATHAFQGRTKATKRLPGGLQLLLRPEPGCAFQGVSLGDAIGDLPAFD 512
>gi|420465164|ref|ZP_14963931.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-6]
gi|393082651|gb|EJB83367.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-6]
Length = 351
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 82/189 (43%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ ++D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFVFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + Y + ++ A YG+PQ R RV L GA K + P
Sbjct: 121 QKGQLFQRICNAFKERGYILEHAILNALDYGVPQIRERVILVGALKRFK-QKFHFPK--- 176
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + E+ D + Y + + F
Sbjct: 177 ----PIKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNVF 213
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 214 LEFVRNSKE 222
>gi|420455009|ref|ZP_14953839.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-14]
gi|393073359|gb|EJB74133.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-14]
Length = 348
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 82/189 (43%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ ++D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKMFVFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + Y + ++ A YG+PQ R RV L GA K + P
Sbjct: 121 QKGQLFQQICNAFKERGYILEHAILNALDYGVPQIRERVILVGALKHFK-QKFHFPK--- 176
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + E+ D + Y + + F
Sbjct: 177 ----PIKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNVF 213
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 214 LEFVRNSKE 222
>gi|420449975|ref|ZP_14948841.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-45]
gi|393069292|gb|EJB70090.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-45]
Length = 348
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 82/189 (43%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ ++D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFVFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + Y + ++ A YG+PQ R RV L GA K + P
Sbjct: 121 QKGQLFQQICNAFKERGYILEHAILNALDYGVPQIRERVILVGALKRFK-QKFHFPKP-- 177
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + E+ D + Y + + F
Sbjct: 178 -----IKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNVF 213
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 214 LEFVRNSKE 222
>gi|379754157|ref|YP_005342829.1| DNA-cytosine methyltransferase [Mycobacterium intracellulare
MOTT-02]
gi|378804373|gb|AFC48508.1| DNA-cytosine methyltransferase [Mycobacterium intracellulare
MOTT-02]
Length = 669
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 62/114 (54%), Gaps = 8/114 (7%)
Query: 521 GDVDVICGGPPCQGVS----GFNRFRNKD---NPLADEKNKQLIVFMDIVDFLKPKFVLM 573
+VD++ GGPPCQ S R+R + +P DE+ F++IVD +PK VLM
Sbjct: 118 AEVDLVAGGPPCQPFSRAGRSMIRYRVQSGLRDP-HDERRDLWRSFLEIVDRARPKAVLM 176
Query: 574 ENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQ 627
ENV D+ + + R + L QMNY V ++ A YG+PQFR R+ L Q
Sbjct: 177 ENVPDMALDREMFILRSMVEELEQMNYSVEERVIDAWRYGVPQFRQRLILVALQ 230
>gi|408399430|gb|EKJ78533.1| hypothetical protein FPSE_01342 [Fusarium pseudograminearum CS3096]
Length = 1348
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 71/144 (49%), Gaps = 9/144 (6%)
Query: 502 EKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLI-VFM 560
+ ++ F G ++ +P GDVD I GG PC GF+ N +A KN+ L+ F
Sbjct: 870 DDMQRFAIQGKFTENVPPVGDVDFISGGSPC---PGFSLLTNDKTTVAQRKNQSLVAAFG 926
Query: 561 DIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLI----QMNYQVRMGMMAAGAYGLPQ 616
+D +P++ L+ENV I+ +K + ++LI + YQ + + A + G PQ
Sbjct: 927 SFIDLYRPRYGLLENVPGIIH-SKVNRDQDVFSQLICAIVGLGYQTQFFFLDASSCGSPQ 985
Query: 617 FRMRVFLWGAQPTEKLPPYALPTH 640
R RVF+ A P LP TH
Sbjct: 986 RRSRVFVVFAAPGHHLPQRPHITH 1009
>gi|420413430|ref|ZP_14912554.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4099]
gi|393029417|gb|EJB30498.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4099]
Length = 351
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 82/189 (43%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ ++D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKMFVFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + Y + ++ A YG+PQ R RV L GA K + P
Sbjct: 121 QKGQLFQQICNAFKERGYILEHAILNALDYGVPQIRERVILVGALKRFK-QKFHFPK--- 176
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + E+ D + Y + + F
Sbjct: 177 ----PIKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNVF 213
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 214 LEFVRNSKE 222
>gi|420395561|ref|ZP_14894788.1| cytosine-specific methyltransferase [Helicobacter pylori CPY1124]
gi|393013997|gb|EJB15171.1| cytosine-specific methyltransferase [Helicobacter pylori CPY1124]
Length = 352
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 82/189 (43%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ ++D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKMFVFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + Y + ++ A YG+PQ R RV L G + K + P
Sbjct: 121 QKGQLFKQICNAFKERGYILEHAILNALDYGVPQIRERVILVGVLKSFK-QKFHFPK--- 176
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + E+ D + Y + + F
Sbjct: 177 ----PIKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNVF 213
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 214 LEFVRNSKE 222
>gi|420435793|ref|ZP_14934792.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-27]
gi|420492530|ref|ZP_14991104.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-15]
gi|420506345|ref|ZP_15004860.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-74]
gi|420526553|ref|ZP_15024954.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-15b]
gi|393051652|gb|EJB52603.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-27]
gi|393106969|gb|EJC07512.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-15]
gi|393115850|gb|EJC16360.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-74]
gi|393131858|gb|EJC32281.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-15b]
Length = 351
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 80/189 (42%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ ++D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFVFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + Y + ++ A YG PQ R RV L GA K Y
Sbjct: 121 QKGQLFKQICNAFKERGYILEHAILNALDYGAPQIRERVILVGALKRFKQKFY------- 173
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + E+ D + Y + + F
Sbjct: 174 -FPKPIKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNVF 213
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 214 LEFVRNSKE 222
>gi|386586337|ref|YP_006082739.1| modification methylase HaeIII [Streptococcus suis D12]
gi|353738483|gb|AER19491.1| modification methylase HaeIII [Streptococcus suis D12]
gi|451939649|gb|AGF89780.1| C-5 cytosine-specific DNA methylase [Streptococcus phage phiD12]
Length = 355
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 89/201 (44%), Gaps = 35/201 (17%)
Query: 516 ILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMEN 575
L VDV+ GGPPCQG S + + DE+N F+ +V+ + P + +MEN
Sbjct: 63 FLQYKNKVDVVVGGPPCQGYSQ----KGSRKTIHDERNFLFKYFVKVVELVSPNYFVMEN 118
Query: 576 VVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPY 635
V +++ KG + + ++ Y + M ++ A +G+PQ R R + G +
Sbjct: 119 VPNLLTAEKGFFKQELITLFEELGYSLSMEIVDASKFGVPQRRRRAIILGKKG------- 171
Query: 636 ALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYD 695
+ +V + + E + + + DAISDL +++ + +E Y
Sbjct: 172 ------------------KKSVTF----RLEEKKSVTIWDAISDLAFLESGDGEEEQNYL 209
Query: 696 REPETEFQCFIRLRKDGKKLW 716
++ +Q LR D K L+
Sbjct: 210 FPAQSNYQQ--ELRSDSKILY 228
>gi|218245850|ref|YP_002371221.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8801]
gi|257058898|ref|YP_003136786.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802]
gi|218166328|gb|ACK65065.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8801]
gi|256589064|gb|ACU99950.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802]
Length = 418
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 76/167 (45%), Gaps = 21/167 (12%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+DV+ GGPPCQG S + L DE+N + F+ +V L+PK+ ++ENV +
Sbjct: 76 IDVVFGGPPCQGFSLMGK-----RVLEDERNALIAHFIRLVLELQPKYFVLENVPGMAIG 130
Query: 583 AKGLLGRYALARLIQMNYQVRMG--MMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTH 640
+ L + + Y+V ++ A YG+PQ R R+FL G Q LP Y
Sbjct: 131 SHQQLLQEIFDKFSYHGYEVETNYQILNAANYGVPQNRERLFLLGCQKGLILPNY----- 185
Query: 641 DVVLRGVIPTEFERNTVAYDE-GQQAELARKLLLQDAISDLPSVDNY 686
P N E Q L + + +AI DLP V+NY
Sbjct: 186 --------PQAISYNFTNKSEPNNQLNLPKCPTVWEAIKDLPEVENY 224
>gi|448668261|ref|ZP_21686392.1| DNA-cytosine methyltransferase [Haloarcula amylolytica JCM 13557]
gi|445768343|gb|EMA19428.1| DNA-cytosine methyltransferase [Haloarcula amylolytica JCM 13557]
Length = 343
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 87/197 (44%), Gaps = 29/197 (14%)
Query: 525 VICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAK 584
+I GGPPC+G S R + DE+N F++ VDF +P F +MENVV +
Sbjct: 1 MIVGGPPCKGFSSIRPDRGTE--AEDERNGLYTDFVNYVDFFEPDFFIMENVVGLATHND 58
Query: 585 GLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVL 644
G+ + + + + Y ++ +GLPQ R R+ + G+ +++ + PTH
Sbjct: 59 GITIQKIIDSVRDIGYSADWRIVNGANFGLPQRRERLIMIGSG-DDRVIEFPRPTHQANG 117
Query: 645 RGVIPTEFERNTVAYDEGQQAELARKLL--------------LQDAISDLPSVDNYESRD 690
R T+ Y + + A+ L + DAI DLP ++ E
Sbjct: 118 R----------TIGYKDESKVITAQPTLDNFRAGTSLPEGRTIMDAIDDLPELEAGEEVT 167
Query: 691 EIPYDREPETEFQCFIR 707
E Y + + E+Q +R
Sbjct: 168 E--YTKPAQNEYQETMR 182
>gi|420441830|ref|ZP_14940775.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-36]
gi|393059959|gb|EJB60834.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-36]
Length = 352
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 78/185 (42%), Gaps = 33/185 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ ++D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFVFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + Y + ++ A YG+PQ R RV L G + K
Sbjct: 121 QKGQLFQRICNAFKERGYILEHAILNALDYGVPQIRERVILVGIHKSFK--------QKF 172
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + E+ D + Y + + F
Sbjct: 173 HFSKPIKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNVF 213
Query: 703 QCFIR 707
F+R
Sbjct: 214 LEFVR 218
>gi|303236368|ref|ZP_07322958.1| DNA (cytosine-5-)-methyltransferase [Prevotella disiens FB035-09AN]
gi|302483426|gb|EFL46431.1| DNA (cytosine-5-)-methyltransferase [Prevotella disiens FB035-09AN]
Length = 357
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 88/194 (45%), Gaps = 32/194 (16%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+DVI GGPPCQG S RN D++NK + ++ V +PK L+ENV +
Sbjct: 76 IDVIIGGPPCQGFS-LTGPRN----FEDKRNKLYLAMIETVHRYQPKAFLIENVPGMANL 130
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG + + R M Y V ++ A YG+PQ R R+ G + ++ + P
Sbjct: 131 YKGAVKDEIIRRFTAMGYNVSCQIVCAADYGVPQIRKRLVFVGLKNNKEKFEFPEP---- 186
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
++ E AY + + AISDLP + + + Y EPETE+
Sbjct: 187 ----LLKEE------AY-----------ITCKQAISDLPPLVDELGSEVSTYCEEPETEY 225
Query: 703 QCFIRLRKDGKKLW 716
Q ++RK+ L+
Sbjct: 226 Q--RKMRKNCDVLY 237
>gi|341868931|gb|AEK98589.1| domain rearranged methyltransferase 1 [Vitis amurensis]
Length = 137
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP PG VD I GGPPCQG SG NRF + + + ++ F+ D+ +P+F L+ENV
Sbjct: 60 LPRPGQVDFINGGPPCQGFSGMNRF--NQGKWSKMQCEMILAFLSFADYFRPRFFLLENV 117
Query: 577 VDIVKFAKGLLGRYALARLI 596
+ V F KG R A L+
Sbjct: 118 RNFVTFNKGQTFRLTPASLL 137
>gi|261203805|ref|XP_002629116.1| DNA methyltransferase Dim-2 [Ajellomyces dermatitidis SLH14081]
gi|239586901|gb|EEQ69544.1| DNA methyltransferase Dim-2 [Ajellomyces dermatitidis SLH14081]
gi|239608866|gb|EEQ85853.1| DNA methyltransferase Dim-2 [Ajellomyces dermatitidis ER-3]
Length = 1233
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 66/124 (53%), Gaps = 9/124 (7%)
Query: 521 GDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIV 580
GDV+VI G PCQG S N K+N ++ + + + VDF +P++ ++ENV+ +
Sbjct: 735 GDVEVISAGSPCQGYSNVNN--RKNNAVSMQNSSMIASVASYVDFYRPQYAILENVIAM- 791
Query: 581 KFAKGLLGRYALARL----IQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ R L +L + M YQ R+ + A ++G PQ R R+F+ A P +LP +
Sbjct: 792 --SNRTHKRNPLCQLLCTFVGMGYQARVLNLDAWSFGAPQSRSRLFIVIAAPGLQLPAHP 849
Query: 637 LPTH 640
TH
Sbjct: 850 PLTH 853
>gi|313667095|gb|ADR72992.1| M2.BspMI [Bacillus sp. M(2010)]
Length = 353
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 60/109 (55%), Gaps = 5/109 (4%)
Query: 522 DVDVICGGPPCQGVSGFN--RFRNKD--NPLADEKNKQLIVFMDIVDFLKPKFVLMENVV 577
DVD++ GGPPCQG S F RF N +P D +NK + ++ +V L+PK+ MENV
Sbjct: 69 DVDLVVGGPPCQGYSMFGKRRFINTQGYDPQEDPRNKLVYEYIRVVKILRPKYFFMENVK 128
Query: 578 DIVKFAKGLLGRYALARLIQMNY-QVRMGMMAAGAYGLPQFRMRVFLWG 625
+ G + + ++ Y ++ ++ A +G+PQ R R+F+ G
Sbjct: 129 GFLSLDNGQFLKTVIQEFEELGYDNIKCEVVCAADFGVPQQRYRMFMIG 177
>gi|327356173|gb|EGE85030.1| cytosine-specific methyltransferase [Ajellomyces dermatitidis ATCC
18188]
Length = 1233
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 66/124 (53%), Gaps = 9/124 (7%)
Query: 521 GDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIV 580
GDV+VI G PCQG S N K+N ++ + + + VDF +P++ ++ENV+ +
Sbjct: 735 GDVEVISAGSPCQGYSNVNN--RKNNAVSMQNSSMIASVASYVDFYRPQYAILENVIAM- 791
Query: 581 KFAKGLLGRYALARL----IQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ R L +L + M YQ R+ + A ++G PQ R R+F+ A P +LP +
Sbjct: 792 --SNRTHKRNPLCQLLCTFVGMGYQARVLNLDAWSFGAPQSRSRLFIVIAAPGLQLPAHP 849
Query: 637 LPTH 640
TH
Sbjct: 850 PLTH 853
>gi|385248556|ref|YP_005776775.1| cytosine specific DNA methyltransferase [Helicobacter pylori F57]
gi|317181351|dbj|BAJ59135.1| cytosine specific DNA methyltransferase [Helicobacter pylori F57]
Length = 281
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 35/192 (18%)
Query: 525 VICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAK 584
+I GGPPCQG S + K+ L D +N + ++IV LKP+ ++ENV +++ K
Sbjct: 1 MIIGGPPCQGFSN----KGKNLGLKDSRNFLFLEHIEIVKALKPEIFIIENVKNLISCTK 56
Query: 585 GLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVL 644
G +L + YQ+ ++ A YG+PQ R R F+ GA
Sbjct: 57 GYFLEEIKEKLNALGYQLSYQILNAKDYGVPQNRERAFIVGAS----------------- 99
Query: 645 RGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQC 704
F+ N + E ++ + +QD ISDL + + E E Y ++ +Q
Sbjct: 100 ----RFSFDFNLL--------EPSQSVNIQDVISDLAYLCSNEGAFESDYLNPIQSSYQ- 146
Query: 705 FIRLRKDGKKLW 716
+ +RKD KL+
Sbjct: 147 -VLMRKDSPKLY 157
>gi|448585611|ref|ZP_21648004.1| DNA-cytosine methyltransferase [Haloferax gibbonsii ATCC 33959]
gi|445726311|gb|ELZ77928.1| DNA-cytosine methyltransferase [Haloferax gibbonsii ATCC 33959]
Length = 404
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 81/189 (42%), Gaps = 32/189 (16%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
VD++ GGPPCQG F+ + D +DE+N + F+D VD L+P+ L ENV I
Sbjct: 76 VDLVAGGPPCQG---FSEVVSPDG--SDERNHLFVNFIDWVDELEPQAALFENVRGIQNT 130
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
A+G + Y V ++ + +G+PQ R RV L + + K P
Sbjct: 131 AEGKFLDAVNDSFANIGYNVTHRVVTSSDFGVPQHRRRVVLLATKDSLKHQPLG------ 184
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
FE N V + + D I DLP V E E YD+ P+T
Sbjct: 185 --------GFELNPV-----------KTPGVIDGIGDLPEVGPGEEITE--YDQSPQTVL 223
Query: 703 QCFIRLRKD 711
Q +R D
Sbjct: 224 QNDLRGDSD 232
>gi|386745963|ref|YP_006219180.1| type II DNA modification (methyltransferase) [Helicobacter pylori
HUP-B14]
gi|384552212|gb|AFI07160.1| type II DNA modification (methyltransferase) [Helicobacter pylori
HUP-B14]
Length = 351
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 82/189 (43%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ ++D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFVFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + Y + ++ A YG+PQ R RV L GA + + Y
Sbjct: 121 QKGQLFQRICNAFKERGYILEHAILNALDYGVPQMRERVILVGALKSFEQKFY------- 173
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + E+ D + Y + + F
Sbjct: 174 -FPKPIKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNVF 213
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 214 LEFVRNSKE 222
>gi|385220298|ref|YP_005781770.1| type II DNA modification [Helicobacter pylori India7]
gi|317009105|gb|ADU79685.1| type II DNA modification [Helicobacter pylori India7]
Length = 348
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 81/189 (42%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ ++D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFVFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + Y + ++ A YG+PQ R RV L G + K Y
Sbjct: 121 QKGQLFQQICNAFKERGYILEHAILNALDYGVPQIRERVILVGVLKSFKQKFY------- 173
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + E+ D + Y + + F
Sbjct: 174 -FPKPIKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNVF 213
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 214 LEFVRNSKE 222
>gi|302690426|ref|XP_003034892.1| hypothetical protein SCHCODRAFT_255903 [Schizophyllum commune H4-8]
gi|300108588|gb|EFI99989.1| hypothetical protein SCHCODRAFT_255903 [Schizophyllum commune H4-8]
Length = 1412
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 64/133 (48%), Gaps = 19/133 (14%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D + GGPPCQ S N +++ + D ++ + + V+ KP + L+ENV ++ F
Sbjct: 1014 IDFVFGGPPCQSFSKANHYKDPN----DIRSFLPLNMLSFVEAYKPDYFLLENVRGLLDF 1069
Query: 583 AKGLLGR---------------YALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQ 627
G R L LI + YQ + ++ AG +G+PQ R RV GA+
Sbjct: 1070 RLGTTTRGMQDANECIKNSMVKIILRTLIALGYQASVRVLQAGQFGVPQARERVIFLGAK 1129
Query: 628 PTEKLPPYALPTH 640
+P + +PTH
Sbjct: 1130 LGLPMPVHPVPTH 1142
>gi|449299607|gb|EMC95620.1| hypothetical protein BAUCODRAFT_90408, partial [Baudoinia
compniacensis UAMH 10762]
Length = 1123
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 65/129 (50%), Gaps = 14/129 (10%)
Query: 521 GDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIV-FMDIVDFLKPKFVLMENVVDI 579
G V+V+ G PC G S + D L +N ++ + VDF PK+ L+ENVV++
Sbjct: 800 GAVEVLGAGSPCPGFSNLQLNKFSDESL---RNASMVAAVIAYVDFYSPKYFLLENVVNM 856
Query: 580 VKFAKGL-------LGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKL 632
+ GL + LA L+ + YQV+ +M A +YG PQ R RVF+ P +
Sbjct: 857 TR---GLGPDKTENVFSQVLAALVGLGYQVQQFLMDAWSYGSPQQRTRVFIVATAPGLDI 913
Query: 633 PPYALPTHD 641
P + THD
Sbjct: 914 LPVPVHTHD 922
>gi|420494407|ref|ZP_14992976.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-16]
gi|393111208|gb|EJC11732.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-16]
Length = 351
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 81/189 (42%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ ++D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFVFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + Y + ++ A YG+PQ R RV L GA K Y
Sbjct: 121 QKGQLFQQICNAFKERGYILEHAILNALDYGVPQVRERVILVGALKRFKQKFY------- 173
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + E+ D + Y + + F
Sbjct: 174 -FPKPIKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNVF 213
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 214 LEFVRNSKE 222
>gi|403161899|ref|XP_003322205.2| hypothetical protein PGTG_03742 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375171974|gb|EFP77786.2| hypothetical protein PGTG_03742 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1210
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 86/203 (42%), Gaps = 37/203 (18%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP PGD D+I G PC S N R + D KN + + +LKP ++ ENV
Sbjct: 612 LPRPGDFDLITAGFPCGSHSTLNVLRKAN----DSKNALCATALSFIAYLKPDYLFFENV 667
Query: 577 VDIVKFAKGLLG-----------------RYALARLIQMNYQVRMGMMAAGAYGLPQFRM 619
+ GLL R LI + YQV+ G++ A +G PQ R
Sbjct: 668 -----WCAGLLKTSFINPGNDSVLNKAFLRIINGALISLGYQVQFGVLQAAQFGSPQARR 722
Query: 620 RVFLWGAQPTEKLPPYALPTH---DVVLRGVIPTEFERN------TVAYDEGQQAELARK 670
R+ G + PTH D L ++PT E++ V D + + A K
Sbjct: 723 RIIFAGTRHGLTAIKLPEPTHHYPDEGLAILLPTNDEKSDHNGHRLVRADYRKCSSGALK 782
Query: 671 -LLLQDAISDLPSVDNYESRDEI 692
+ + DAISDLP + Y + D I
Sbjct: 783 AITVHDAISDLPEFE-YLNPDRI 804
>gi|420430157|ref|ZP_14929187.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-20]
gi|393048776|gb|EJB49743.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-20]
Length = 351
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 82/189 (43%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ ++D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFIFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + Y + ++ A YG+PQ R RV L G + K + P
Sbjct: 121 QKGQLFQRICNAFKERGYILEHAILNALDYGVPQVRERVILVGVLKSFK-QKFHFPK--- 176
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + E+ D + Y + + F
Sbjct: 177 ----PIKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNIF 213
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 214 LEFVRNSKE 222
>gi|225862883|ref|YP_002748261.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus 03BB102]
gi|225787129|gb|ACO27346.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus 03BB102]
Length = 367
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 88/188 (46%), Gaps = 37/188 (19%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
D++ I GGPPCQG F+ +D + DE+N + + +V + PKF ++ENV ++
Sbjct: 71 DIEGIIGGPPCQG---FSTVGTRD--INDERNHLYLEYYRVVKEIMPKFFVIENVKGLLT 125
Query: 582 FAKGLLGRYALARLIQMNYQVR-MGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTH 640
G+ L R ++ Y++ ++ A YG+PQ R RVF
Sbjct: 126 LNNGMFKEDILNRFGELGYKISDPQVLNAADYGVPQNRQRVFFV---------------- 169
Query: 641 DVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEI-PYDREPE 699
GV+ FE + DE + + L +A+SDLP +D E +E+ Y +P+
Sbjct: 170 -----GVLDGHFEYPEL--DENKVSTL-------EALSDLPVLDKIEQYNEVYNYSCDPQ 215
Query: 700 TEFQCFIR 707
+Q +R
Sbjct: 216 NSYQSIMR 223
>gi|426200066|gb|EKV49990.1| hypothetical protein AGABI2DRAFT_115056 [Agaricus bisporus var.
bisporus H97]
Length = 1378
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 86/193 (44%), Gaps = 29/193 (15%)
Query: 518 PLP--GDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMEN 575
P+P G+VD I GGPPCQ SG N R D D ++ + ++ + L+EN
Sbjct: 945 PMPNRGEVDFIFGGPPCQSFSGANHHRQAD----DIRSTMPCNMLSFLEHYDADYFLLEN 1000
Query: 576 VVDIVKF--------------AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRV 621
V + + K + + + L+ + QV+ ++ AG YG PQ R RV
Sbjct: 1001 VRGLANYPLLSEQKGRILSGGVKSGMVKLIMQCLVALGRQVQWKVLQAGQYGAPQNRERV 1060
Query: 622 FLWGAQPTEKLPPYALPTHDV---VLRGVIPTEFE-----RNTVAYDEGQQAELARKLLL 673
W A+ LP + +P + + ++PT + R+ V Q A L + +
Sbjct: 1061 IFWAAKRGLVLPKHPVPLYAWKRGAMSSLLPTGTKLPPPTRSLVPGVCHQYAPLP-PITV 1119
Query: 674 QDAISDLPSVDNY 686
+ AI DLP+ D Y
Sbjct: 1120 KTAIGDLPAFDWY 1132
>gi|420475342|ref|ZP_14974013.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-21]
gi|393093449|gb|EJB94066.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-21]
Length = 352
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 82/189 (43%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ ++D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFIFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + Y + ++ A YG+PQ R RV L G + K + P
Sbjct: 121 QKGQLFQRICNAFKERGYILEHAILNALDYGVPQVRERVILVGVLKSFK-QKFHFPK--- 176
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + E+ D + Y + + F
Sbjct: 177 ----PIKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNVF 213
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 214 LEFVRNSKE 222
>gi|385221953|ref|YP_005771086.1| type II DNA modification (methyltransferase) [Helicobacter pylori
SouthAfrica7]
gi|317010732|gb|ADU84479.1| type II DNA modification (methyltransferase) [Helicobacter pylori
SouthAfrica7]
Length = 348
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 83/189 (43%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ ++D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFVFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + Y + ++ A YG+PQ R RV L G + K Y P
Sbjct: 121 QKGQLFKQICNAFKERGYILEHAILNALDYGVPQMRERVILVGVLKSFKQKFY-FPK--- 176
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
PT+ + L+DA+ DLP + + E+ D + Y + + F
Sbjct: 177 ------PTKMHFS-----------------LKDALGDLPPIQSGENGDALGYLKNADNVF 213
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 214 LEFVRNSKE 222
>gi|408826936|ref|ZP_11211826.1| site-specific DNA methylase [Streptomyces somaliensis DSM 40738]
Length = 335
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 41/210 (19%)
Query: 498 SNCGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLI 557
+ CG+ + + KS I P + I GGPPCQG S + RN+D D++N+
Sbjct: 35 AECGD-VADLTAEKLKSVI---PQRPNWIVGGPPCQGYSTVGK-RNRD----DQRNRLFE 85
Query: 558 VFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQF 617
F+ IV LKP ++ENV+ + + + Q+ YQVR + +A +G+PQ
Sbjct: 86 HFLRIVGHLKPDGFVIENVLGLKDMS---YEQEVADAFKQLGYQVRFQVASAADHGVPQL 142
Query: 618 RMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAI 677
R RV G + E +G+ P V+ ++ AI
Sbjct: 143 RRRVLFVGHREAE-------------FKGLDPLLQADQYVSVEQ--------------AI 175
Query: 678 SDLPSVDNYESRDEIPYDREPETEFQCFIR 707
DLP++ ++ YDR+ E++FQ +R
Sbjct: 176 GDLPALQPGQT--ATTYDRKAESQFQKLMR 203
>gi|448532943|ref|ZP_21621363.1| DNA-cytosine methyltransferase [Halorubrum hochstenium ATCC 700873]
gi|445706177|gb|ELZ58062.1| DNA-cytosine methyltransferase [Halorubrum hochstenium ATCC 700873]
Length = 396
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 60/118 (50%), Gaps = 18/118 (15%)
Query: 520 PGDVDVICGGPPCQGVSGFNRFRNK----DNPLADEKNKQLIVFMDIVDFLKPKFVLMEN 575
PG +DV+ GGPPCQ GF+R N+ D D +N F+ +V L+P+ VLMEN
Sbjct: 96 PGGIDVVIGGPPCQ---GFSRLNNEQIELDEMEKDRRNTLFEEFLRVVSVLEPQLVLMEN 152
Query: 576 VVDIV-------KFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGA 626
V D++ ++ K L+ + Y+ ++ A YG+PQ R R+F G
Sbjct: 153 VRDLINRQTSDDRYVKDLI----VDEFAAHGYKCEYRVLEAEQYGVPQKRRRIFFMGT 206
>gi|220903553|ref|YP_002478865.1| DNA-cytosine methyltransferase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219867852|gb|ACL48187.1| DNA-cytosine methyltransferase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 308
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 58/106 (54%), Gaps = 4/106 (3%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
D D+I GG PCQG S N RN ++DE+N + +V +PKF L ENV I+
Sbjct: 61 DSDIIIGGFPCQGFSVANIKRN----ISDERNTLYKHLLRVVSAKQPKFFLAENVKGILS 116
Query: 582 FAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQ 627
KG + + L + Y +++ ++ A YG+PQ R RVF+ G +
Sbjct: 117 LGKGHVIQMILNDFENIGYTMQLKLLNAADYGVPQTRQRVFIAGVR 162
>gi|358385860|gb|EHK23456.1| hypothetical protein TRIVIDRAFT_349, partial [Trichoderma virens
Gv29-8]
Length = 1029
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 16/201 (7%)
Query: 504 IKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIV-FMDI 562
++ F G + +P GDVD + GG PC GF+ N A KN+ L+ F
Sbjct: 671 LQHFAIRGQFADNVPRIGDVDFVSGGSPC---PGFSILTNDKTTAAQRKNQSLVAAFASF 727
Query: 563 VDFLKPKFVLMENVVDIVKFAKGL---LGRYALARLIQMNYQVRMGMMAAGAYGLPQFRM 619
VD +PK+ ++ENV ++ + + + L+ + YQ + + A + G PQ R
Sbjct: 728 VDLYRPKYGVLENVPGMIHKKESRDQDVFSQLICSLVGLGYQTQFFFLDASSCGSPQRRS 787
Query: 620 RVFLWGAQPTEKLPPYALPTHDVVLR------GVIPTEFERNTVAYDEGQQAELARKLLL 673
R+F+ A P +LP + TH + G +P +A E A + +
Sbjct: 788 RIFVIFAAPGLELPKKPVQTHSHPPKTRELGIGWLPNG---QHMATREMPAATPFKYISA 844
Query: 674 QDAISDLPSVDNYESRDEIPY 694
++A +DLP + + + +PY
Sbjct: 845 EEAAADLPPIHDAKPDICVPY 865
>gi|332706962|ref|ZP_08427022.1| DNA-methyltransferase [Moorea producens 3L]
gi|332354227|gb|EGJ33707.1| DNA-methyltransferase [Moorea producens 3L]
Length = 450
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 89/195 (45%), Gaps = 27/195 (13%)
Query: 514 SKILPLPGDVDVICGGPPCQGVS-GFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVL 572
S+I+ PG++D++ GGPPCQG S +RF + D +N L ++ + L PK+ +
Sbjct: 89 SEIVMKPGELDILIGGPPCQGFSTAGSRFWD------DPRNNLLKQYVKALTILNPKWFI 142
Query: 573 MENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKL 632
MENV ++ KG A I++ Y +R+ + + YG+PQ R RV + G +
Sbjct: 143 MENVEGLLTSNKGKYVYEAAKAFIELGYWIRIEKIYSQEYGIPQRRKRVLIIGNRLGHD- 201
Query: 633 PPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEI 692
+ +P + G + RN+ + + AI+ LP +
Sbjct: 202 --FRIPAPKFQVSG----QLFRNS-------------DITISHAINSLPPATKDKGTLLT 242
Query: 693 PYDREPETEFQCFIR 707
P P+ +F F+R
Sbjct: 243 PLTSPPQDDFDSFLR 257
>gi|428221921|ref|YP_007106091.1| DNA-methyltransferase Dcm [Synechococcus sp. PCC 7502]
gi|427995261|gb|AFY73956.1| DNA-methyltransferase Dcm [Synechococcus sp. PCC 7502]
Length = 441
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 80/176 (45%), Gaps = 23/176 (13%)
Query: 521 GDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIV 580
++DV+ GG PCQG S + L D +N + F+ +V L PK+ ++ENV +
Sbjct: 75 AEIDVVFGGSPCQGFSLIGK-----RALDDPRNALVSHFLRLVTELNPKYFVLENVKGLT 129
Query: 581 KFAKGLLGRYALARLIQMNYQVR--MGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALP 638
+A NY+V ++ A YG+PQ R R+FL G + KLP Y LP
Sbjct: 130 IGKHRQFLAEVIAEFESHNYEVLRDYRVLNASHYGVPQSRDRLFLIGCRQGLKLPNYPLP 189
Query: 639 -THDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYE---SRD 690
T L P EF L + DAI+DLP ++NY SRD
Sbjct: 190 ITKPPKLGKNPPQEF------------VSLPNCPTVWDAIADLPKIENYPELMSRD 233
>gi|334119885|ref|ZP_08493969.1| DNA-cytosine methyltransferase [Microcoleus vaginatus FGP-2]
gi|333457526|gb|EGK86149.1| DNA-cytosine methyltransferase [Microcoleus vaginatus FGP-2]
Length = 394
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 80/183 (43%), Gaps = 34/183 (18%)
Query: 521 GDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIV 580
++D+I GG PCQG S + + D +N F D+V ++P +V++ENV ++
Sbjct: 78 AEIDIITGGAPCQGFSTVGK-----REITDPRNSLWRNFRDLVAEIRPAYVIIENVEGML 132
Query: 581 KFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTH 640
G + +A + Y ++ ++ A YG+PQ R R F G
Sbjct: 133 VMQGGKVRDSVIASFADIGYHMKCRLLKAADYGVPQLRKRAFFIGW-------------- 178
Query: 641 DVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPET 700
L G++P EF Y + + DAISDLP ++ E Y P+T
Sbjct: 179 ---LDGLLPPEFPVPISHY----------YVTVADAISDLPPLNAGEICKS--YQSMPQT 223
Query: 701 EFQ 703
++Q
Sbjct: 224 DYQ 226
>gi|357458739|ref|XP_003599650.1| Cytosine-specific methyltransferase [Medicago truncatula]
gi|357491291|ref|XP_003615933.1| Cytosine-specific methyltransferase [Medicago truncatula]
gi|355488698|gb|AES69901.1| Cytosine-specific methyltransferase [Medicago truncatula]
gi|355517268|gb|AES98891.1| Cytosine-specific methyltransferase [Medicago truncatula]
Length = 145
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 78/186 (41%), Gaps = 59/186 (31%)
Query: 199 AESGEEDYICKIVEMFEAVDGTPYFTAQWYYRARDTVIESNAHLIDQRRVFFSEIQNDNP 258
E G E YICKI+EMFE+VDG + ++RA I +D F ++ Q
Sbjct: 11 GEKGGESYICKIIEMFESVDG------ELFFRAYICKIIEMFKSVDGELFFRAQWQ---- 60
Query: 259 LECLVKKLNIARVPLNIDLEAKKLAIPHCDYYCDMMYLLPYSTFFSLPPENKRVSSETSS 318
AK +NK + SE SS
Sbjct: 61 ------------------YRAKD------------------------TIKNKDILSEISS 78
Query: 319 TISSDVDAN-----ECEVGEPQKMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVD 373
T+SS N + +K ++KLLDLYSGCG MST LC G L+ + RWAV+
Sbjct: 79 TVSSHPKVNGKSFMNTNMVNTKKPELKLLDLYSGCGGMSTDLCQGGLLSSSKM--RWAVN 136
Query: 374 INEYAC 379
+NE+ C
Sbjct: 137 MNEHEC 142
>gi|420468527|ref|ZP_14967269.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-10]
gi|393088208|gb|EJB88860.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-10]
Length = 352
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 82/189 (43%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ ++D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFIFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + Y + ++ A YG+PQ R RV L G + K + P
Sbjct: 121 QKGQLFQRICNAFKERGYILEHAILNALDYGVPQVRERVILVGVLKSFK-QKFHFPK--- 176
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + E+ D + Y + + F
Sbjct: 177 ----PIKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNIF 213
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 214 LEFVRNSKE 222
>gi|2894387|emb|CAA74997.1| Bpu10I (5m)cytosine-specific DNA modification methyltransferase
(C2) [Bacillus pumilus]
Length = 392
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 97/201 (48%), Gaps = 36/201 (17%)
Query: 514 SKILPLPGDVDVICGGPPCQG--VSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFV 571
S+I+ L VD+I GGPPCQG V+G +++ + D +N ++ LKP V
Sbjct: 59 SEIIKLFKGVDIITGGPPCQGFSVAGPSQY-----GIIDNRNNLIMEMYRFASILKPNLV 113
Query: 572 LMENVVDIVKF----AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQ 627
++ENV I+ K L Y + + + Y++++ ++ +G+PQ R RVF+ A+
Sbjct: 114 ILENVKGILNGKLSPTKKALDEY-MNNMSNIGYKIKVFVLNTSDFGVPQGRQRVFVIAAR 172
Query: 628 PTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYE 687
IP E Y +G++A K + +A+ DLP +D+ E
Sbjct: 173 N----------------EAFIPLEI---IGEYTQGKKA----KRTVGEALEDLPLIDSGE 209
Query: 688 S-RDEIPYDREPETEFQCFIR 707
D + Y E +T++Q ++R
Sbjct: 210 GVEDAVTYPFEAKTDYQKWLR 230
>gi|392397895|ref|YP_006434496.1| DNA-methyltransferase Dcm [Flexibacter litoralis DSM 6794]
gi|390528973|gb|AFM04703.1| DNA-methyltransferase Dcm [Flexibacter litoralis DSM 6794]
Length = 332
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 57/111 (51%), Gaps = 2/111 (1%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
++DV+ GGPPCQG S K + D +N+ F+ IV +KPKF +MENV +
Sbjct: 72 EIDVVIGGPPCQGFSIAGNIGRKF--VDDPRNRLFKEFVRIVKVVKPKFFVMENVARLYT 129
Query: 582 FAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKL 632
KG + ++ Y+V ++ + YG+PQ R RV G +K+
Sbjct: 130 HNKGATRNEIIKDFEKLGYKVDCKILNSADYGVPQVRKRVIFIGTSTNQKI 180
>gi|208434405|ref|YP_002266071.1| type II DNA modification enzyme [Helicobacter pylori G27]
gi|208432334|gb|ACI27205.1| type II DNA modification enzyme [Helicobacter pylori G27]
Length = 348
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 81/189 (42%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ ++D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFVFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + Y + ++ A YG+PQ R RV L G K + P
Sbjct: 121 QKGQLFQQICNAFKERGYVLEHAILNALDYGVPQIRERVILVGTLKRFK-QKFHFPK--- 176
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + E+ D + Y + + F
Sbjct: 177 ----PIKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNVF 213
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 214 LEFVRNSKE 222
>gi|421714623|ref|ZP_16153944.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R036d]
gi|407218308|gb|EKE88137.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R036d]
Length = 351
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 80/189 (42%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ ++D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFVFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + Y + ++ A YG+PQ R RV L G K Y
Sbjct: 121 QKGQLFQQICNAFKERGYILEHAILNALDYGVPQIRERVILVGVLKRFKQKFY------- 173
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + E+ D + Y + + F
Sbjct: 174 -FPKPIKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNVF 213
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 214 LEFVRNSKE 222
>gi|384897195|ref|YP_005772623.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori Lithuania75]
gi|317012300|gb|ADU82908.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori Lithuania75]
Length = 348
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 81/192 (42%), Gaps = 39/192 (20%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ ++D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFVFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKL---PPYALPT 639
KG L + + Y + ++ A YG+PQ R RV L G + K P + T
Sbjct: 121 QKGQLFQQICNAFKERGYILEHAILNALDYGVPQIRERVILVGTLKSFKQKFHSPKPIKT 180
Query: 640 HDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPE 699
H L+DA+ DLP + + E+ D + Y + +
Sbjct: 181 H------------------------------FSLKDALGDLPPIQSGENGDALGYLKNAD 210
Query: 700 TEFQCFIRLRKD 711
F F+R K+
Sbjct: 211 NVFLEFVRNSKE 222
>gi|428779548|ref|YP_007171334.1| DNA-methyltransferase Dcm [Dactylococcopsis salina PCC 8305]
gi|428693827|gb|AFZ49977.1| DNA-methyltransferase Dcm [Dactylococcopsis salina PCC 8305]
Length = 392
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 55/101 (54%), Gaps = 5/101 (4%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++CGGPPCQG S + N D++N F+ I+ LKP +V+MENV ++
Sbjct: 71 IDLVCGGPPCQGFSTIGQ-----NNHQDQRNFLFWEFLRIIKSLKPDYVIMENVTGLLSR 125
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFL 623
+ L Q+ Y+V + +++A YG+P+ R R L
Sbjct: 126 KNEVTLNVILESFTQIGYKVDIKVLSAHHYGVPEKRRRTIL 166
>gi|420456726|ref|ZP_14955547.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-16]
gi|393075357|gb|EJB76112.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-16]
Length = 351
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 80/189 (42%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ ++D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKMFVFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + Y + ++ A YG+PQ R RV L G K Y
Sbjct: 121 QKGQLFQQICNAFKERGYILEHAILNALDYGVPQIRERVILVGVLKRFKQKFY------- 173
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + E+ D + Y + + F
Sbjct: 174 -FPKPIKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNVF 213
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 214 LEFVRNSKE 222
>gi|453084864|gb|EMF12908.1| S-adenosyl-L-methionine-dependent methyltransferase [Mycosphaerella
populorum SO2202]
Length = 1034
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 73/149 (48%), Gaps = 14/149 (9%)
Query: 511 GFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIV-FMDIVDFLKPK 569
G S I+ PG + VI G PCQG S ++++ D ++N ++ + VD P+
Sbjct: 679 GESSDIVAEPGSIHVISAGSPCQGFSNLQQYKDSDR---SKRNASMVASVISYVDLYAPR 735
Query: 570 FVLMENVVDIVKFAKGLLGRYA----LARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWG 625
++++ENV+ + K G+ +A L+ + YQV+ +M A YG Q R RVF+
Sbjct: 736 YLILENVIAMTTSIKEHGGQNVFSQMIAALVGLGYQVQQFLMDAYYYGSSQARSRVFILA 795
Query: 626 AQPTEKLPPYALPTHDVVLRGVIPTEFER 654
+ P ++ TH PTE ER
Sbjct: 796 SAPICEVLEQQDYTH------ARPTELER 818
>gi|420482042|ref|ZP_14980679.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-2]
gi|420512466|ref|ZP_15010949.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-2b]
gi|393099276|gb|EJB99857.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-2]
gi|393157529|gb|EJC57790.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-2b]
Length = 351
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 81/189 (42%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ ++D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFVFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + Y + ++ A YG+PQ R RV L G K + P
Sbjct: 121 QKGQLFQQICNAFKERGYILEHAILNALDYGVPQIRERVILVGVLKRFK-QKFHFPK--- 176
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + E+ D + Y + + F
Sbjct: 177 ----PIKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNVF 213
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 214 LEFVRNSKE 222
>gi|414079463|ref|YP_007000887.1| DNA 5-cytosine methylase [Anabaena sp. 90]
gi|413972742|gb|AFW96830.1| DNA 5-cytosine methylase [Anabaena sp. 90]
Length = 415
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 83/171 (48%), Gaps = 39/171 (22%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIV- 580
++DV+ GGPPCQG S + R+ D+P +N + F+ +V L+PKF ++ENV +
Sbjct: 75 EIDVVFGGPPCQGFSLIGK-RSFDDP----RNSLVFHFIRLVVELQPKFFVLENVKGMTV 129
Query: 581 ----KFAKGLLGRYALARL-IQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPY 635
+F ++ ++ + I NYQV + A YG+PQ R R+FL GA+ +LP Y
Sbjct: 130 GKHKEFIAEIINQFTESGYQIDANYQV----LNAANYGVPQNRERLFLLGAREDLELPKY 185
Query: 636 ALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNY 686
P PT + DA+ DLP+++NY
Sbjct: 186 --PEKITFPNQTSPT----------------------VWDALQDLPAIENY 212
>gi|421654486|ref|ZP_16094813.1| putative modification methylase HaeIII [Acinetobacter baumannii
Naval-72]
gi|408510257|gb|EKK11919.1| putative modification methylase HaeIII [Acinetobacter baumannii
Naval-72]
Length = 307
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 56/104 (53%), Gaps = 4/104 (3%)
Query: 524 DVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFA 583
DVI GG PCQG S N R D+P +NK + + I+ KPK+ + ENV I+
Sbjct: 63 DVIVGGFPCQGFSQANMKRKADDP----RNKLYLEMIRIISDKKPKYFIAENVRGILSLD 118
Query: 584 KGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQ 627
KG + ++ ++NY V ++ YG+PQ RMRV + G +
Sbjct: 119 KGKVIEQIVSDFNELNYNVSYSLLNCADYGVPQKRMRVIILGIR 162
>gi|420539629|ref|ZP_15037948.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M5]
gi|393147314|gb|EJC47639.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M5]
Length = 338
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 81/189 (42%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ ++D +KPK + ENVV ++
Sbjct: 54 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFIFENVVGLMSM 107
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + Y + ++ A YG PQ R RV L G + K + P
Sbjct: 108 QKGQLFQRICNAFKERGYILEHAILNALDYGAPQVRERVILVGTLKSFK-QKFHFPK--- 163
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + E+ D + Y + + F
Sbjct: 164 ----PIKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNVF 200
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 201 LEFVRNSKE 209
>gi|444424849|ref|ZP_21220301.1| modification methylase DdeI [Vibrio campbellii CAIM 519 = NBRC
15631]
gi|444241972|gb|ELU53490.1| modification methylase DdeI [Vibrio campbellii CAIM 519 = NBRC
15631]
Length = 418
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 77/164 (46%), Gaps = 30/164 (18%)
Query: 474 GLYLKVRWRNYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQ 533
G + W N+ P E T + N EK E +T L G VD+I GGPPCQ
Sbjct: 55 GKHAHFDWPNWLPEEAT-----TIQNLLEKYPEQLT--------ALKGKVDLIAGGPPCQ 101
Query: 534 GVSGFNRFRNKD--NPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYA 591
G S R KD N L+DE ++ +V+ + PK++L+ENV K L G+ A
Sbjct: 102 GFSLAGRRNAKDPRNKLSDE-------YIKMVEIVSPKYLLLENVRGFNASFKALEGKKA 154
Query: 592 --------LARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQ 627
A+L ++ Y+V + + +G+PQ R R + G +
Sbjct: 155 KKPHSMIVKAKLEKLGYKVFTDFLCSADFGVPQKRTRFIMIGVK 198
>gi|301321463|gb|ADK70106.1| DNA (cytosine-5-)-methyltransferase [Mycoplasma mycoides subsp.
mycoides SC str. Gladysdale]
Length = 493
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 89/194 (45%), Gaps = 36/194 (18%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
V++I GGPPCQG S + K L D++N +++IV L+P+ ++ENV ++
Sbjct: 46 VNMIIGGPPCQGFSN----KGKKLGLNDKRNFLFKEYLEIVGKLQPEIFIIENVKTMLTT 101
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
A G Q+ Y V G++ A +G+PQ R R + K P LP +
Sbjct: 102 ANGYFLDQIQNTAKQLGYFVEYGVLNAYDFGVPQTRSRTTI----ICHKNHPIKLPIGN- 156
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
+K+ ++DAISDL +++ + E Y EP++E+
Sbjct: 157 -------------------------HKKVNIEDAISDLNYLNSNQGEFESNYLLEPKSEY 191
Query: 703 QCFIRLRKDGKKLW 716
Q +RK+ KL+
Sbjct: 192 QKM--MRKNSNKLY 203
>gi|387907797|ref|YP_006338131.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori XZ274]
gi|387572732|gb|AFJ81440.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori XZ274]
Length = 352
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 81/189 (42%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ ++D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFVFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + Y + ++ A YG+ Q R RV L G + K + P
Sbjct: 121 QKGQLFKQICNAFKERGYILEHAILNALDYGVTQIRERVILVGVLKSFK-QKFHFPK--- 176
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + ES D + Y + + F
Sbjct: 177 ----PIKTHFS-------------------LKDALGDLPPIQSGESGDALGYLKNADNVF 213
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 214 LEFVRNSKE 222
>gi|354567856|ref|ZP_08987023.1| DNA-cytosine methyltransferase [Fischerella sp. JSC-11]
gi|353541530|gb|EHC10997.1| DNA-cytosine methyltransferase [Fischerella sp. JSC-11]
Length = 528
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 63/145 (43%), Gaps = 26/145 (17%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
L L D+DVI GGPPCQ S K DE+ + F+D++ L+PKF ++ENV
Sbjct: 183 LGLQEDIDVIVGGPPCQAFSS----AGKRQGFNDERGNVFLTFIDLITELRPKFAVIENV 238
Query: 577 VDIVKF---------------------AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLP 615
++ +G Y RL Q Y V + A +G P
Sbjct: 239 RGLLSAPLKHRPHEMRGVNYPPLSQEEQRGGALLYITRRLKQAGYSVSFNLYNAANFGSP 298
Query: 616 QFRMRVFLWGAQPTEKLPPYALPTH 640
Q R R+ + + EKL PY PTH
Sbjct: 299 QQRERIIITCCRDGEKL-PYLTPTH 322
>gi|390599489|gb|EIN08885.1| S-adenosyl-L-methionine-dependent methyltransferase, partial
[Punctularia strigosozonata HHB-11173 SS5]
Length = 181
Score = 68.9 bits (167), Expect = 9e-09, Method: Composition-based stats.
Identities = 38/111 (34%), Positives = 58/111 (52%), Gaps = 15/111 (13%)
Query: 521 GDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIV 580
GD+DVI G PCQ S N +R +D+P +++ ++ + V +PK+ + ENV +
Sbjct: 75 GDIDVILAGFPCQSHSALNMYRKEDDP----RSRLMLTMLSFVHVYQPKYCVFENVPGFL 130
Query: 581 KFAKGL---------LG--RYALARLIQMNYQVRMGMMAAGAYGLPQFRMR 620
++ G +G R L M+YQVR G++ AG YG PQ R R
Sbjct: 131 EYDPGAGQEDPEHNKMGGLRLLYHALTTMSYQVRCGVLQAGNYGAPQHRQR 181
>gi|341819908|emb|CCC56122.1| DNA (cytosine-5-)-methyltransferase [Weissella thailandensis
fsh4-2]
Length = 357
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 87/185 (47%), Gaps = 31/185 (16%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
V++I GGPPCQG S + K L D +N + ++++V+ L+P+ ++ENV ++
Sbjct: 73 VNMIIGGPPCQGFSN----KGKKLGLDDPRNFLFLEYLEMVNRLQPEVFVIENVKAMLTA 128
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
G + + R+ + Y+V +++A YG+PQ R R + A+ D
Sbjct: 129 VNGYFIKEIVDRINALGYKVNYSILSASNYGVPQNRQRAIIIAAK-------------DK 175
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
++ +PT + K ++DAISDL +++ E Y + E+ +
Sbjct: 176 KIKMPVPT--------------VGINNKTTVRDAISDLSYLNSGEGEMISQYRKPSESNY 221
Query: 703 QCFIR 707
Q +R
Sbjct: 222 QTMMR 226
>gi|284928852|ref|YP_003421374.1| DNA-methyltransferase Dcm [cyanobacterium UCYN-A]
gi|284809311|gb|ADB95016.1| DNA-methyltransferase Dcm [cyanobacterium UCYN-A]
Length = 422
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 77/167 (46%), Gaps = 24/167 (14%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
++DV+ GGPPCQG S + KDN +N + F+ +V L+PK+ ++ENV +
Sbjct: 75 EIDVVFGGPPCQGFSLIGKRNPKDN-----RNNLIKHFIRLVIELQPKYFVIENVPGMAT 129
Query: 582 FAKGLLGRYALARLIQMNYQVRMG--MMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPT 639
I NY++ ++ A YG+PQ R R+F+ G + LP Y
Sbjct: 130 KNNQAFLEEIFDEFIANNYRIETNYKILNAANYGVPQIRKRLFIMGGKSDLPLPDYP--- 186
Query: 640 HDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNY 686
+F N Y++ + + + AI+DLP V++Y
Sbjct: 187 -----------QFLTN---YNQEINSTIPFTPTVSQAINDLPEVNHY 219
>gi|421717992|ref|ZP_16157293.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R038b]
gi|407222784|gb|EKE92582.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R038b]
Length = 439
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 72/140 (51%), Gaps = 13/140 (9%)
Query: 500 CGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVF 559
CG+ ++ + + S + L D+ICGGPPCQG S FR ++P +N+ F
Sbjct: 248 CGDITQQAIKNKISS--IALEQGADIICGGPPCQGFS-MAGFRADNDP----RNQLFRDF 300
Query: 560 MDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRM 619
+D++ +KPK ++ ENV ++ + KG + + ++ Y +M+A +G+ Q R
Sbjct: 301 IDVIKKVKPKIIVFENVEGLLSYQKGKIYKEIHQLFSELGYNTNGRVMSANEFGVSQKRK 360
Query: 620 RVFLWGAQ------PTEKLP 633
RV + A+ P+E P
Sbjct: 361 RVIIICARDDLNIMPSELFP 380
>gi|420433643|ref|ZP_14932651.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-24]
gi|420507397|ref|ZP_15005910.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp H-24b]
gi|420509085|ref|ZP_15007587.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp H-24c]
gi|420532834|ref|ZP_15031197.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M1]
gi|420534397|ref|ZP_15032748.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M2]
gi|420536203|ref|ZP_15034545.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M3]
gi|420537907|ref|ZP_15036237.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M4]
gi|420541394|ref|ZP_15039702.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M6]
gi|420542914|ref|ZP_15041209.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M9]
gi|393051171|gb|EJB52124.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-24]
gi|393119478|gb|EJC19969.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp H-24b]
gi|393120511|gb|EJC21000.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp H-24c]
gi|393140465|gb|EJC40838.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M1]
gi|393142620|gb|EJC42974.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M2]
gi|393143851|gb|EJC44195.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M3]
gi|393145462|gb|EJC45793.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M4]
gi|393148014|gb|EJC48338.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M6]
gi|393159977|gb|EJC60226.1| cytosine-specific methyltransferase [Helicobacter pylori Hp M9]
Length = 351
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 81/189 (42%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ ++D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFIFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + Y + ++ A YG PQ R RV L G + K + P
Sbjct: 121 QKGQLFQRICNAFKERGYILEHAILNALDYGAPQVRERVILVGTLKSFK-QKFHFPK--- 176
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + E+ D + Y + + F
Sbjct: 177 ----PIKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNVF 213
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 214 LEFVRNSKE 222
>gi|336467555|gb|EGO55719.1| hypothetical protein NEUTE1DRAFT_67631 [Neurospora tetrasperma FGSC
2508]
Length = 1452
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 62/115 (53%), Gaps = 9/115 (7%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIV-FMDIVDFLKPKFVLMEN 575
+P PG+VD I G PC GF+ L KN+ L+ F VDF +PK+ ++EN
Sbjct: 909 VPRPGEVDFIAAGSPC---PGFSLLTQDKKVLNQVKNQSLVASFASFVDFYRPKYGVLEN 965
Query: 576 VVDIVKF----AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGA 626
V IV+ + +L + A L+ M YQ ++ + A A+G PQ R RVFL+ A
Sbjct: 966 VSGIVQTFVNRKQDVLSQLFCA-LVGMGYQAQLILGDAWAHGAPQSRERVFLYFA 1019
>gi|283956744|ref|ZP_06374220.1| hypothetical protein C1336_000290019 [Campylobacter jejuni subsp.
jejuni 1336]
gi|283791719|gb|EFC30512.1| hypothetical protein C1336_000290019 [Campylobacter jejuni subsp.
jejuni 1336]
Length = 330
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 57/105 (54%), Gaps = 2/105 (1%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
+ +VI GGPPCQG S + K+ L D++NK + ++ + +KPK +MENV + +
Sbjct: 72 NFEVIIGGPPCQGFSLAGKIGRKE--LQDDRNKLFLAYLKFIKNIKPKIFIMENVASLAR 129
Query: 582 FAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGA 626
KG + L +NY+V+ ++ Y + Q R R+F+ G
Sbjct: 130 HNKGQTLKEILQCFYNINYEVKYEILNTKDYSIAQNRSRIFIVGT 174
>gi|254779148|ref|YP_003057253.1| type II cytosine specific DNA methyltransferase [Helicobacter
pylori B38]
gi|254001059|emb|CAX29005.1| M. Hpy99XI, type II cytosine specific DNA methyltransferase
[Helicobacter pylori B38]
Length = 348
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 81/189 (42%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ ++D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFVFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + Y + ++ A YG+PQ R RV L G K + P
Sbjct: 121 QKGQLFQRICNAFKERGYILEHAILNALDYGVPQVRERVILVGVLKRFK-QKFHFPK--- 176
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + E+ D + Y + + F
Sbjct: 177 ----PIKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNVF 213
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 214 LEFVRNSKE 222
>gi|387782130|ref|YP_005792843.1| type II m5C methylase [Helicobacter pylori 51]
gi|261837889|gb|ACX97655.1| type II m5C methylase [Helicobacter pylori 51]
Length = 348
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 82/189 (43%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ ++D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKMFVFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + Y + ++ A YG+PQ R RV L G + K
Sbjct: 121 QKGQLFKQICNAFKERGYILEHAILNALDYGVPQIRERVILVGTLKSFK----------- 169
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
+ + +A + L+DA+ DLP + + E+ D + Y + + F
Sbjct: 170 ------------QKFHFPKPIKAHFS----LKDALGDLPPIQSGENGDALGYLKNADNVF 213
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 214 LEFVRNSKE 222
>gi|85094494|ref|XP_959891.1| hypothetical protein NCU02247 [Neurospora crassa OR74A]
gi|13936826|gb|AAK49954.1|AF348971_1 DNA methyltransferase Dim-2 [Neurospora crassa]
gi|28921348|gb|EAA30655.1| predicted protein [Neurospora crassa OR74A]
Length = 1454
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 62/115 (53%), Gaps = 9/115 (7%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIV-FMDIVDFLKPKFVLMEN 575
+P PG+VD I G PC GF+ L KN+ L+ F VDF +PK+ ++EN
Sbjct: 911 VPRPGEVDFIAAGSPC---PGFSLLTQDKKVLNQVKNQSLVASFASFVDFYRPKYGVLEN 967
Query: 576 VVDIVKF----AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGA 626
V IV+ + +L + A L+ M YQ ++ + A A+G PQ R RVFL+ A
Sbjct: 968 VSGIVQTFVNRKQDVLSQLFCA-LVGMGYQAQLILGDAWAHGAPQSRERVFLYFA 1021
>gi|350287792|gb|EGZ69028.1| DNA methyltransferase Dim-2 [Neurospora tetrasperma FGSC 2509]
Length = 1416
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 62/115 (53%), Gaps = 9/115 (7%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIV-FMDIVDFLKPKFVLMEN 575
+P PG+VD I G PC GF+ L KN+ L+ F VDF +PK+ ++EN
Sbjct: 873 VPRPGEVDFIAAGSPC---PGFSLLTQDKKVLNQVKNQSLVASFASFVDFYRPKYGVLEN 929
Query: 576 VVDIVKF----AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGA 626
V IV+ + +L + A L+ M YQ ++ + A A+G PQ R RVFL+ A
Sbjct: 930 VSGIVQTFVNRKQDVLSQLFCA-LVGMGYQAQLILGDAWAHGAPQSRERVFLYFA 983
>gi|386748677|ref|YP_006221885.1| type II DNA modification (methyltransferase) [Helicobacter cetorum
MIT 99-5656]
gi|384554919|gb|AFI06675.1| type II DNA modification (methyltransferase) [Helicobacter cetorum
MIT 99-5656]
Length = 349
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 82/189 (43%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ ++D +KPK + ENVV ++
Sbjct: 68 IDILLGGPPCQSYSTLGKRQ------MDEKANLFKEYLRVLDLVKPKIFIFENVVGLMSM 121
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + Y + ++ A YG+PQ R RV L G L +
Sbjct: 122 QKGQLFKKICSAFKDRGYILEYTILNALDYGVPQIRERVILVG----------VLKNFNR 171
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
PT+ + L+DA+ DLP + + E+ + + Y + + +F
Sbjct: 172 QFYFPKPTK-----------------KHFSLKDALGDLPQIQSGENGNALGYLKNADNDF 214
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 215 LKFVRNSKE 223
>gi|443322505|ref|ZP_21051526.1| DNA-methyltransferase Dcm [Gloeocapsa sp. PCC 73106]
gi|442787773|gb|ELR97485.1| DNA-methyltransferase Dcm [Gloeocapsa sp. PCC 73106]
Length = 404
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 78/166 (46%), Gaps = 35/166 (21%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
VDV+ GGPPCQG+S + R+ D+P +N L F+ +V L+ F ++ENV ++
Sbjct: 79 VDVVFGGPPCQGLSLMGK-RDLDDP----RNSLLQHFIRLVIELETNFFVLENVPGLIIG 133
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGA--YGLPQFRMRVFLWGAQPTEKLPPYALPTH 640
L + + +L Q Y+VR A YG+PQ R R+FL G + LP Y P
Sbjct: 134 KCSQLLQEMIEQLAQNGYKVRENFQTINACNYGVPQKRERLFLMGCKKNLPLPEYPSP-- 191
Query: 641 DVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNY 686
LA + + DAI+DLPSV +Y
Sbjct: 192 --------------------------LADQPKVNDAIADLPSVTDY 211
>gi|127439|sp|P05302.1|MTD1_DESNO RecName: Full=Modification methylase DdeI; Short=M.DdeI; AltName:
Full=Cytosine-specific methyltransferase DdeI
gi|79418|pir||S00543 site-specific DNA-methyltransferase (cytosine-specific) (EC
2.1.1.73) DdeI - Desulfovibrio desulfuricans
gi|40795|emb|CAA68505.1| DdeI methylase [Desulfovibrio vulgaris]
Length = 415
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 84/187 (44%), Gaps = 34/187 (18%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
DVD I GGPPCQG F+ N+D D +N + F+ V F PKF +MENV+ I+
Sbjct: 66 DVDGIIGGPPCQG---FSLSGNRDQ--KDPRNSLFVDFVRFVKFFSPKFFVMENVLGILS 120
Query: 582 F---AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYAL- 637
++ + + Y+V + ++ A YG+PQ R RVF G + L L
Sbjct: 121 MKTKSRQYVKDIIAEEFSNVGYKVCVIILNACDYGVPQSRQRVFFIGLKSDRPLNQQILT 180
Query: 638 -PTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDR 696
P+ VI +E+ L++AISDLP ++ E + Y
Sbjct: 181 PPSK------VIESEYTS------------------LEEAISDLPVIEAGEGGEVQDYPV 216
Query: 697 EPETEFQ 703
P ++Q
Sbjct: 217 APRNKYQ 223
>gi|409082235|gb|EKM82593.1| hypothetical protein AGABI1DRAFT_125058 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1360
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 85/191 (44%), Gaps = 29/191 (15%)
Query: 518 PLP--GDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMEN 575
P+P G+VD I GGPPCQ SG N R D D ++ + ++ + L+EN
Sbjct: 945 PMPNRGEVDFIFGGPPCQSFSGANHHRQAD----DIRSTMPCNMLSFLEHYDADYFLLEN 1000
Query: 576 VVDIVKF--------------AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRV 621
V + + K + + + L+ + QV+ ++ AG YG PQ R RV
Sbjct: 1001 VRGLANYPLLSEQKGRILSGGVKSGMVKLIMQCLVALGRQVQWKVLQAGQYGAPQNRERV 1060
Query: 622 FLWGAQPTEKLPPYALPTHDV---VLRGVIPTEFE-----RNTVAYDEGQQAELARKLLL 673
W A+ LP + +P + + ++PT + R+ V Q A L + +
Sbjct: 1061 IFWAAKRGLVLPKHPVPLYAWKRGAMSSLLPTGTKLPPPTRSLVPGVCHQYAPLP-PITV 1119
Query: 674 QDAISDLPSVD 684
+ AI DLP+ D
Sbjct: 1120 KTAIGDLPAFD 1130
>gi|426411086|ref|YP_007031185.1| cytosine-specific methyltransferase [Pseudomonas sp. UW4]
gi|426269303|gb|AFY21380.1| cytosine-specific methyltransferase [Pseudomonas sp. UW4]
Length = 424
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 73/158 (46%), Gaps = 28/158 (17%)
Query: 480 RWRNYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFN 539
R+R PS W PIE +S C E +KS +L L G +D++ GGPPCQG S
Sbjct: 47 RYRFNWPS---WLPIEAMS-C-----EAFLENYKSHLLKLAGTIDLMVGGPPCQGFSTAG 97
Query: 540 RFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDI--------------VKFAKG 585
R RN ++P +NK ++++V ++P F+++ENV K+
Sbjct: 98 R-RNPEDP----RNKMAEQYLELVKIIRPNFIVIENVSGFNSRFTRKNSDAEVDGKYITQ 152
Query: 586 LLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFL 623
+ L + Y V G + +G+PQ R R +
Sbjct: 153 SYADFICESLSSLGYAVSRGKINCADFGVPQNRHRYLI 190
>gi|357458741|ref|XP_003599651.1| Cytosine-specific methyltransferase [Medicago truncatula]
gi|357491293|ref|XP_003615934.1| Cytosine-specific methyltransferase [Medicago truncatula]
gi|355488699|gb|AES69902.1| Cytosine-specific methyltransferase [Medicago truncatula]
gi|355517269|gb|AES98892.1| Cytosine-specific methyltransferase [Medicago truncatula]
Length = 502
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 59/110 (53%), Gaps = 19/110 (17%)
Query: 273 LNIDLEAKKLAIPHCDYYCDMMYLLPYSTFFSLPPENKRVSSETSSTISSDVDANECEVG 332
++D +AKK IP CDYYCD S + + D +
Sbjct: 412 FDLDFDAKKETIPPCDYYCD-------------------TLYLLSYSHLLNFDQLNTNIA 452
Query: 333 EPQKMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSL 382
+K+++KLLDLYSGCG MSTGLC G L+ +VTRWAVD+NE+AC L
Sbjct: 453 NTEKLELKLLDLYSGCGGMSTGLCQGGMLSISKMVTRWAVDMNEHACMIL 502
>gi|322700739|gb|EFY92492.1| putative DNA cytosine methyltransferase [Metarhizium acridum CQMa
102]
Length = 950
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 67/135 (49%), Gaps = 9/135 (6%)
Query: 511 GFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIV-FMDIVDFLKPK 569
G SK +P G VD I GG PC G S + D KN+ L+ F VD +P
Sbjct: 542 GNFSKSVPTIGSVDFISGGSPCPGFSLLTNDKTTDE---QRKNQSLVAAFASCVDLYRPM 598
Query: 570 FVLMENVVDIVKFA----KGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWG 625
+ L+ENV IV+ + +L ++ A ++ + YQ ++ + A +YG Q R RVF+
Sbjct: 599 YGLLENVPGIVQSKANRDQDVLSQFICA-IVGIGYQAQVFCLDASSYGSAQRRSRVFISF 657
Query: 626 AQPTEKLPPYALPTH 640
A P KLP TH
Sbjct: 658 AAPNYKLPGKPQQTH 672
>gi|229490017|ref|ZP_04383870.1| modification methylase DdeI [Rhodococcus erythropolis SK121]
gi|229323118|gb|EEN88886.1| modification methylase DdeI [Rhodococcus erythropolis SK121]
Length = 431
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 8/139 (5%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
D+DV+ GGPPCQG S R R++ AD +N +++ + +KPK ++MENV ++
Sbjct: 158 DIDVLAGGPPCQGFSLAGR-RDR----ADPRNHLFRNLLELAELVKPKVLVMENVRLLLS 212
Query: 582 FA---KGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALP 638
G++ L + Y + + A YG+PQFR RVF+ + + P P
Sbjct: 213 MKDPDGGMVVDRILGEMAACGYDASVNTVNAQDYGVPQFRERVFIVATRRDSGIGPLRFP 272
Query: 639 THDVVLRGVIPTEFERNTV 657
+ GV P R+
Sbjct: 273 PKTHGVNGVAPLRTFRDAT 291
>gi|167046802|ref|YP_001661472.1| DNA methyltransferase [Acinetobacter venetianus]
gi|83833711|gb|ABC47668.1| DNA methyltransferase [Acinetobacter venetianus]
Length = 737
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 65/127 (51%), Gaps = 7/127 (5%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
+VDVI GGPPCQG F+ NK++ +D +N ++ +V+ KPK L ENV ++
Sbjct: 75 EVDVIIGGPPCQG---FSNMGNKNS--SDPRNYLFENYVSLVNTFKPKCFLFENVKGLLT 129
Query: 582 FAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHD 641
+G + + + Y + ++ + YG+PQ R RVFL G + K + P D
Sbjct: 130 MFEGRFFENIVNSFLSIGYSISYTLIDSSLYGVPQKRERVFLMGTRLQHK--KFNFPKPD 187
Query: 642 VVLRGVI 648
V G +
Sbjct: 188 VKPYGFL 194
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 61/122 (50%), Gaps = 5/122 (4%)
Query: 523 VDVICGGPPCQGVSGFN--RFRNKDNPLA--DEKNKQLIVFMDIVDFLKPKFVLMENVVD 578
VD++ GGPPCQG S F RF N N D++N + F +IV + K+ +MENV
Sbjct: 440 VDLVVGGPPCQGFSIFGKRRFVNTKNHQISEDKRNNLVFAFANIVIKSEAKWFIMENVPG 499
Query: 579 IVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALP 638
I+ G + + Y+ ++ A YG+PQ R R L G + T+ + P+ P
Sbjct: 500 ILSAQNGEYVKAIQEFFAENGYRTECKVINAADYGVPQLRKRFLLIGTK-TDLVIPFPKP 558
Query: 639 TH 640
+
Sbjct: 559 KY 560
>gi|157164246|ref|YP_001466260.1| modification methylase HaeIII (cytosine-specificmethyltransferase
HaeIII; M.HaeIII) [Campylobacter concisus 13826]
gi|112801543|gb|EAT98887.1| modification methylase HaeIII (Cytosine-specificmethyltransferase
HaeIII) (M.HaeIII) [Campylobacter concisus 13826]
Length = 388
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 110/241 (45%), Gaps = 36/241 (14%)
Query: 475 LYLKVRWRNYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQG 534
L L+ R R+YG E+ I+ ++ +K + K D+DVI GGPPCQ
Sbjct: 39 LTLQERMRHYGYHENEINKIKP-TDITDKNIISIIESNIGKT----SDIDVIIGGPPCQS 93
Query: 535 VSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALAR 594
S + R+ + D +N +++I+++ KPKF + ENV I+ + + G+ +
Sbjct: 94 FSSHGKARDPFSMKKDPRNYLYENYLNILNYFKPKFFVFENVSGIL--STKIKGKSIIKD 151
Query: 595 L---IQMNYQV----RMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGV 647
+ ++ NY + M ++ A +G+PQ R R+ + G + + P ++
Sbjct: 152 IFDGMKKNYNIIENKDMILLNAVDFGVPQDRKRIIIIGTRKDLSINPKSI---------- 201
Query: 648 IPTEFERNTVAYDEGQQ-AELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQCFI 706
YDE + + +K ++DAISDLP + E + ++ ++ + I
Sbjct: 202 -----------YDELKNITKKLKKTTVRDAISDLPKLKPSEGMQTVNFNPTNKSSYLKLI 250
Query: 707 R 707
R
Sbjct: 251 R 251
>gi|316934943|ref|YP_004109925.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris DX-1]
gi|315602657|gb|ADU45192.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris DX-1]
Length = 495
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 82/179 (45%), Gaps = 21/179 (11%)
Query: 524 DVICGGPPCQGVSGFNRFRNKD---NPLA---DEKNKQLIVFMDIVDFLKPKFVLMENVV 577
D+I GGPPCQ + R + ++ +P A D + + ++ V+ L+P +LMENV
Sbjct: 103 DLIVGGPPCQAYARVGRAKLREVAEHPQAFKIDPRANLYLRYLHYVERLQPIALLMENVP 162
Query: 578 DIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTE------- 630
DI+ + +G+ + L M Y+ R ++ + +G+PQ R RVFL +
Sbjct: 163 DILNYGGHNIGQEIVEALDAMGYEARYSLLNSAHHGVPQMRDRVFLLAFHKSIEADIRFP 222
Query: 631 ------KLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSV 683
+LP T V L+ + FE N + EL + +AI DLP +
Sbjct: 223 KASRFCQLPSGYAGTRSVALKHI--NMFEGNAYVTPDTGSPELPPAVTAGEAIGDLPPI 279
>gi|420453298|ref|ZP_14952137.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-8]
gi|393070906|gb|EJB71695.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-8]
Length = 269
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 81/189 (42%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ I+D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRILDLVKPKIFVFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + Y + ++ A YG+PQ R RV L G + K + P
Sbjct: 121 QKGQLFQRICNAFKERGYILEHAILNALDYGVPQIRERVILVGTLKSFK-QKFHFPK--- 176
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DL + + E+ D + Y + + F
Sbjct: 177 ----PIKTHFS-------------------LKDALGDLSPIQSGENGDALGYLKNADNVF 213
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 214 LEFVRNSKE 222
>gi|325270471|ref|ZP_08137073.1| modification methylase DdeI [Prevotella multiformis DSM 16608]
gi|324987194|gb|EGC19175.1| modification methylase DdeI [Prevotella multiformis DSM 16608]
Length = 398
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 87/191 (45%), Gaps = 38/191 (19%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
VDVI GGPPCQG S + + D++NK F+ +V PK +MENV +I+
Sbjct: 123 VDVIIGGPPCQGFSVAGK-----RIVDDDRNKLYKGFVRMVSCFHPKAFVMENVPNILTI 177
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMR-VFLWGAQPTEKLPPYALPTHD 641
G++ + ++ Y+V ++ A YG+PQ R R +F+ TE + P+
Sbjct: 178 GNGVIKESIIKDFSELGYKVSYKVLLASDYGVPQNRRRAIFVGMLDGTE----FVFPS-- 231
Query: 642 VVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETE 701
PT L + ++AISDLP D+ E P D P++E
Sbjct: 232 -------PT----------------LETPVTCKEAISDLPE-DSLPEGGEYPAD--PQSE 265
Query: 702 FQCFIRLRKDG 712
+Q +R DG
Sbjct: 266 YQKLMREGSDG 276
>gi|311064356|ref|YP_003971081.1| cytosine methyl transferase Dcm [Bifidobacterium bifidum PRL2010]
gi|310866675|gb|ADP36044.1| Dcm Cytosine methyl transferase [Bifidobacterium bifidum PRL2010]
Length = 326
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 80/172 (46%), Gaps = 23/172 (13%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
D D++ GG PCQG S N RN D++NK + ++ I+ KP F + ENV I+
Sbjct: 73 DCDIMIGGFPCQGFSMANTKRNA----LDKRNKLYLQYIRILKAKKPMFFVAENVKGILT 128
Query: 582 FAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHD 641
KG + + ++ + Y+V ++ A YG+PQ R RV + G
Sbjct: 129 LGKGEVIKAIVSDFAEAGYRVVYQLLNAADYGVPQTRQRVIIVG---------------- 172
Query: 642 VVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIP 693
+R + EF + + L R + +Q+AI D+P D ++ D +P
Sbjct: 173 --VRNDLDVEFTYPQPTNSKEGKNGLPRWISVQEAIKDIPDPDGPDA-DSVP 221
>gi|119489697|ref|ZP_01622456.1| putative 5-methylcytosine methyltransferase [Lyngbya sp. PCC 8106]
gi|119454434|gb|EAW35583.1| putative 5-methylcytosine methyltransferase [Lyngbya sp. PCC 8106]
Length = 384
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 52/103 (50%), Gaps = 5/103 (4%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
VD+ICGGPPCQG S N+ D++N F+ IV KP +++MENV ++
Sbjct: 71 VDLICGGPPCQGFSTIGANDNR-----DKRNFLFFEFLRIVTAFKPDYLIMENVTGLLSR 125
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWG 625
L ++ Y + + ++AA YG+PQ R R G
Sbjct: 126 NNEPTLSLILNSFAELGYTIEVRVLAAHHYGVPQARRRTIFLG 168
>gi|170739771|ref|YP_001768426.1| DNA-cytosine methyltransferase [Methylobacterium sp. 4-46]
gi|168194045|gb|ACA15992.1| DNA-cytosine methyltransferase [Methylobacterium sp. 4-46]
Length = 434
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 68/130 (52%), Gaps = 11/130 (8%)
Query: 507 FVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFL 566
F TH +++++ L G VD++ GGPPCQG S N R+ D+P ++ + V++ V +
Sbjct: 69 FTTH--RAELVGLRGKVDLLAGGPPCQGFST-NGLRHPDDP----RSAMVDVYLQYVAAV 121
Query: 567 KPKFVLMENVVDIVKF---AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFL 623
+P+ VL+ENVV G Y L ++ YQ ++ A +G+PQ R R L
Sbjct: 122 QPRLVLLENVVGFRSMKHRTGGSYSDYVTRELDRLGYQAWSDVLRAADWGVPQRRPRFVL 181
Query: 624 WGAQPTEKLP 633
A P LP
Sbjct: 182 LAA-PKGTLP 190
>gi|283834911|ref|ZP_06354652.1| C-5 cytosine-specific DNA methylase family protein [Citrobacter
youngae ATCC 29220]
gi|291069174|gb|EFE07283.1| C-5 cytosine-specific DNA methylase family protein [Citrobacter
youngae ATCC 29220]
Length = 400
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 68/113 (60%), Gaps = 10/113 (8%)
Query: 519 LPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVD 578
L G++D+I GGPPCQG F+ R K++ + D +N LI + D V KPK L+ENV
Sbjct: 85 LEGELDIIIGGPPCQG---FSSHRIKNSGVDDPRNNLLIRYFDFVKVFKPKLFLVENVPG 141
Query: 579 IV-KFAKGLLGRY-ALARLIQMNYQVRMGMMAAGA--YGLPQFRMRVFLWGAQ 627
++ + KG L ++ +LA NY++ +G + A YG+PQ R RVF+ G +
Sbjct: 142 LLWEKHKGYLNKFKSLAEC--NNYKI-IGPVKLNAKDYGVPQNRNRVFILGLR 191
>gi|385261866|ref|ZP_10039983.1| putative modification methylase BspRI [Streptococcus sp. SK643]
gi|385192588|gb|EIF39993.1| putative modification methylase BspRI [Streptococcus sp. SK643]
Length = 406
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 67/127 (52%), Gaps = 6/127 (4%)
Query: 519 LPG-DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVV 577
+PG D+DV+ GG PCQG S N RN + D +N + + ++ +PKF + ENV
Sbjct: 62 IPGTDIDVVIGGFPCQGFSIANSKRN----MEDHRNFLYLELLRVIKDKQPKFFVAENVK 117
Query: 578 DIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYAL 637
++ KG + + + Y+V ++ A YG+PQ R RV + G + + P+
Sbjct: 118 GLLSMQKGKVIDMIVKDFESLGYKVDYRLLNAAEYGVPQARERVIIIGNRLGIE-NPFPK 176
Query: 638 PTHDVVL 644
PTH +++
Sbjct: 177 PTHKIIV 183
>gi|284046510|ref|YP_003396850.1| DNA-cytosine methyltransferase [Conexibacter woesei DSM 14684]
gi|283950731|gb|ADB53475.1| DNA-cytosine methyltransferase [Conexibacter woesei DSM 14684]
Length = 424
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 95/190 (50%), Gaps = 24/190 (12%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
D+D++ GGPPCQ +++ RN D + D +N+ F+ ++ ++P+ +++ENV+ + +
Sbjct: 75 DLDLLAGGPPCQA---YSQVRNHDRLIDDPRNRLYREFVGLLQEIRPRTLVLENVLGMSQ 131
Query: 582 FAKGLLGRYALARL-IQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTH 640
G + R L +Q Y V G++ AG +G PQ R R+ G + + P LP
Sbjct: 132 LKGGAVRRQIEQDLSLQGAYDVISGVLDAGDFGTPQRRPRLVFIGVRTDIGVAP-GLPEG 190
Query: 641 DVVLRGV------IPTE----FER--NTVAYDEGQQAELARKLLLQDAISDL--PSVDNY 686
+ R + PTE +R + V D G + R + +Q A+SDL P D Y
Sbjct: 191 TGLSRALRNGHSGQPTEALFSLDRPLHEVLTDPGDR----RAVTVQQALSDLIEPG-DVY 245
Query: 687 ESRDEIPYDR 696
SR + Y R
Sbjct: 246 SSRPQSAYQR 255
>gi|209544778|ref|YP_002277007.1| DNA-cytosine methyltransferase [Gluconacetobacter diazotrophicus
PAl 5]
gi|209532455|gb|ACI52392.1| DNA-cytosine methyltransferase [Gluconacetobacter diazotrophicus
PAl 5]
Length = 435
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 65/124 (52%), Gaps = 9/124 (7%)
Query: 513 KSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVL 572
++++ L G VD++ GGPPCQG S N R D+P ++K + V++ V+ ++P+ +L
Sbjct: 73 ETELAELRGKVDLVAGGPPCQGFS-MNGLRRPDDP----RSKMVDVYLHYVEIVRPRLIL 127
Query: 573 MENVVDIVKF---AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPT 629
+ENVV G Y RL Y + ++ A +G+PQ R R F+ A P
Sbjct: 128 LENVVGFRSMKHRTGGTYSDYTKRRLEAFGYDTWIEILRAADWGVPQRRPR-FVLIAAPK 186
Query: 630 EKLP 633
LP
Sbjct: 187 GTLP 190
>gi|162149538|ref|YP_001603999.1| cytosine-specifi methyltransferase DdeI [Gluconacetobacter
diazotrophicus PAl 5]
gi|161788115|emb|CAP57719.1| putative cytosine-specifi methyltransferase DdeI [Gluconacetobacter
diazotrophicus PAl 5]
Length = 435
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 65/124 (52%), Gaps = 9/124 (7%)
Query: 513 KSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVL 572
++++ L G VD++ GGPPCQG S N R D+P ++K + V++ V+ ++P+ +L
Sbjct: 73 ETELAELRGKVDLVAGGPPCQGFS-MNGLRRPDDP----RSKMVDVYLHYVEIVRPRLIL 127
Query: 573 MENVVDIVKF---AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPT 629
+ENVV G Y RL Y + ++ A +G+PQ R R F+ A P
Sbjct: 128 LENVVGFRSMKHRTGGTYSDYTKRRLEAFGYDTWIEILRAADWGVPQRRPR-FVLIAAPK 186
Query: 630 EKLP 633
LP
Sbjct: 187 GTLP 190
>gi|60202519|gb|AAX14651.1| BbvCI methyltransferase 2 [Brevibacillus brevis]
Length = 396
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 91/195 (46%), Gaps = 39/195 (20%)
Query: 523 VDVICGGPPCQG--VSGFNRF--RNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVD 578
V+++ GGPPCQG VSG ++ K+N L E ++ ++ ++P++ ++ENV
Sbjct: 70 VNLVVGGPPCQGFSVSGPRQYGVYKKENALVAE-------YIRVIKAVEPEYFILENVRG 122
Query: 579 IVKFAKGLLGR-----YALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLP 633
+ GR + LA L ++ Y V ++ A YG+PQ R R+F+ G+
Sbjct: 123 FT--TATIEGRIKALNFLLAELREIGYHVYHDVLQAADYGVPQLRSRLFVVGS------- 173
Query: 634 PYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDE-I 692
R I F T + + Q L L + +AI DLP ++ E D +
Sbjct: 174 -----------RHPIANPFPNKTHSLNGTQH--LRPYLSIMEAIGDLPIINACEGTDNLV 220
Query: 693 PYDREPETEFQCFIR 707
Y EP+ +FQ +R
Sbjct: 221 QYSLEPQNDFQQAMR 235
>gi|225560828|gb|EEH09109.1| DNA methyltransferase Dim-2 [Ajellomyces capsulatus G186AR]
Length = 1236
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 65/124 (52%), Gaps = 9/124 (7%)
Query: 521 GDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIV 580
GDV I G PCQG S N K++ ++ + + + VDF +P++ ++ENV+ +
Sbjct: 737 GDVGFISAGSPCQGYSSVNG--RKESAVSMQNSSMIASVASYVDFYRPQYAILENVIAM- 793
Query: 581 KFAKGLLGRYALARL----IQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ R L +L + M YQVR+ + A ++G PQ R R+F+ A P +LP +
Sbjct: 794 --SNRTHERSPLCQLLCTFVGMGYQVRILNLDAWSFGAPQSRSRLFIVIAAPGLQLPAHP 851
Query: 637 LPTH 640
TH
Sbjct: 852 PLTH 855
>gi|255514225|gb|EET90487.1| DNA-cytosine methyltransferase [Candidatus Micrarchaeum acidiphilum
ARMAN-2]
Length = 328
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 80/168 (47%), Gaps = 18/168 (10%)
Query: 483 NYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVS-GFNRF 541
N+ P+ DT+ S E +T G + K L V+V+ GGPPCQG S G NR
Sbjct: 34 NWKPAVDTFSRNHKKSIGLEADMRSLTVG-QLKTLVSEAKVNVVIGGPPCQGFSMGGNR- 91
Query: 542 RNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF----AKGLLGRYALARLIQ 597
NP AD +N F+ IV + P F +MENV ++ +K G L
Sbjct: 92 ----NP-ADPRNSLFREFIRIVKGMAPDFFVMENVRGLLSLKLVDSKMTFGEKILHDFNS 146
Query: 598 MNYQVRMGMMAAGAYGLPQFRMRVFLWGA--QPTEK--LPPYALPTHD 641
+ Y+ + + A YG+PQ R R+F G + EK LPP +PTH
Sbjct: 147 IGYRTTIHTLNAANYGVPQKRQRIFFIGVNRRQAEKAILPP--VPTHS 192
>gi|240280627|gb|EER44131.1| DNA methyltransferase [Ajellomyces capsulatus H143]
gi|325089115|gb|EGC42425.1| DNA methyltransferase [Ajellomyces capsulatus H88]
Length = 1234
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 65/124 (52%), Gaps = 9/124 (7%)
Query: 521 GDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIV 580
GDV I G PCQG S N K++ ++ + + + VDF +P++ ++ENV+ +
Sbjct: 737 GDVGFISAGSPCQGYSSVNG--RKESAVSMQNSSMIASVASYVDFYRPQYAILENVIAM- 793
Query: 581 KFAKGLLGRYALARL----IQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ R L +L + M YQVR+ + A ++G PQ R R+F+ A P +LP +
Sbjct: 794 --SNRTHERSPLCQLLCTFVGMGYQVRILNLDAWSFGAPQSRSRLFIVIAAPGLQLPAHP 851
Query: 637 LPTH 640
TH
Sbjct: 852 PLTH 855
>gi|420501298|ref|ZP_14999842.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-30]
gi|393150104|gb|EJC50412.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-30]
Length = 351
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 80/189 (42%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ ++D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFVFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + Y + ++ A YG+ Q R RV L GA K Y
Sbjct: 121 QKGQLFQRICNAFKERGYILEHAILNALDYGVHQIRERVILVGALKRFKQKFY------- 173
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + E+ D + Y + + F
Sbjct: 174 -FPKPIKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNVF 213
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 214 LEFVRNSKE 222
>gi|402553563|ref|YP_006594834.1| site-specific DNA methylase [Bacillus cereus FRI-35]
gi|401794773|gb|AFQ08632.1| site-specific DNA methylase [Bacillus cereus FRI-35]
Length = 430
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 76/150 (50%), Gaps = 8/150 (5%)
Query: 494 IEGLSNCGEKIKEFVTHGFKSKILP--LPG-DVDVICGGPPCQGVSGFNRFRNKDNPLAD 550
+ ++ + I + + HG ++I +PG DVDV+ GG PCQG S N R+ + D
Sbjct: 36 VNAVNTYRKNIGDHIVHGDITQIPSEEIPGEDVDVVIGGFPCQGFSVANTKRS----MED 91
Query: 551 EKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAG 610
++N + + IV KPKF + ENV ++ +KG + ++ Y V ++ A
Sbjct: 92 KRNFLYLELLRIVKDKKPKFFVAENVKGLLSMSKGKVIEMIKNDFEKLGYTVEYRVLNAA 151
Query: 611 AYGLPQFRMRVFLWGAQPTEKLPPYALPTH 640
YG+PQ R RV + G + + PY TH
Sbjct: 152 DYGVPQLRERVIIIGNRFGIQ-NPYPEKTH 180
>gi|420414837|ref|ZP_14913953.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4053]
gi|393033804|gb|EJB34865.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4053]
Length = 439
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 71/140 (50%), Gaps = 13/140 (9%)
Query: 500 CGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVF 559
CG+ ++ + + S + L D+ICGGPPCQG S FR ++P +N+ F
Sbjct: 248 CGDITQQAIKNKISS--IALEQGADIICGGPPCQGFS-MAGFRADNDP----RNQLFRDF 300
Query: 560 MDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRM 619
+D++ +KPK ++ ENV ++ + KG + + ++ Y +M A +G+ Q R
Sbjct: 301 IDVIKKVKPKIIVFENVEGLLSYQKGKIYKEIHQLFSELGYNTNGRVMFANEFGVSQKRR 360
Query: 620 RVFLWGAQ------PTEKLP 633
RV + A+ P+E P
Sbjct: 361 RVIIICARDDLNIMPSELFP 380
>gi|448427452|ref|ZP_21583767.1| DNA-cytosine methyltransferase [Halorubrum terrestre JCM 10247]
gi|445678139|gb|ELZ30633.1| DNA-cytosine methyltransferase [Halorubrum terrestre JCM 10247]
Length = 426
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 59/118 (50%), Gaps = 18/118 (15%)
Query: 520 PGDVDVICGGPPCQGVSGFNRFRNK----DNPLADEKNKQLIVFMDIVDFLKPKFVLMEN 575
P VDV+ GGPPCQ GF+R N+ D D +N F+ +V L+P+ VLMEN
Sbjct: 126 PDGVDVVIGGPPCQ---GFSRLNNEQIELDEMEKDRRNTLFEEFLRVVSVLEPQLVLMEN 182
Query: 576 VVDIV-------KFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGA 626
V D++ ++ K L+ + Y+ ++ A YG+PQ R R+F G
Sbjct: 183 VRDLINRQTSDDRYVKDLI----VDEFAAHGYKCEYRVLEAEQYGVPQKRRRIFFMGT 236
>gi|258568064|ref|XP_002584776.1| predicted protein [Uncinocarpus reesii 1704]
gi|237906222|gb|EEP80623.1| predicted protein [Uncinocarpus reesii 1704]
Length = 1033
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 70/135 (51%), Gaps = 11/135 (8%)
Query: 511 GFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIV-FMDIVDFLKPK 569
G KS ++ G V+ I GG PCQG S N + + L +N +I + VDF +P
Sbjct: 649 GDKSDLIAKLGQVEFISGGSPCQGYSLANPQKWSEMSL---RNSSMIASVVAYVDFYRPH 705
Query: 570 FVLMENVVDIVKFAKGLLGRYALARLI----QMNYQVRMGMMAAGAYGLPQFRMRVFLWG 625
+ ++ENV + A R L++LI M YQ+R+ + A +YG PQ R R+FL
Sbjct: 706 YAILENVPAM---ASKTHKRNPLSQLICAFVGMGYQLRLMHLDAWSYGAPQSRSRLFLLI 762
Query: 626 AQPTEKLPPYALPTH 640
A P +LP + TH
Sbjct: 763 AAPGLELPDHPPLTH 777
>gi|428210295|ref|YP_007094648.1| DNA-cytosine methyltransferase [Chroococcidiopsis thermalis PCC
7203]
gi|428012216|gb|AFY90779.1| DNA-cytosine methyltransferase [Chroococcidiopsis thermalis PCC
7203]
Length = 390
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 26/143 (18%)
Query: 520 PGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDI 579
PG++D++ GGPPCQ S K + D + + F+ IV+ L+P+F +MENV +
Sbjct: 82 PGEIDLVTGGPPCQPFS----TAGKRGSVIDPRGSLFMDFIRIVEQLQPRFFVMENVRGL 137
Query: 580 VKF---------------------AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFR 618
+ +G + LA + + YQV ++ A YG+PQ R
Sbjct: 138 LSAPIRHRPHLQRGMGYPPLEQDEMQGSALQVVLAEMKSLGYQVVYNLLEAADYGVPQNR 197
Query: 619 MRVFLWGAQPTEKLPPYALPTHD 641
RV G++ +E + + LPTH
Sbjct: 198 ERVIFIGSRESEAV-TFPLPTHS 219
>gi|449085227|gb|AGE84600.1| cytosine DNA methyltransferase [Helicobacter pylori]
Length = 352
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 96/206 (46%), Gaps = 38/206 (18%)
Query: 513 KSKILPLPG--DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKF 570
K K++ L ++++I G PPCQG S + K+ L D +N + +++IV +KP+
Sbjct: 60 KEKVIKLAKKLEINMIIGRPPCQGFSN----KGKNLGLKDPRNF-FLEYIEIVKAIKPEI 114
Query: 571 VLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTE 630
++ENV +I+ AKG RL + YQ+ ++ A YG+PQ R R F GA
Sbjct: 115 FIIENVKNIISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRERAFNVGAS--- 171
Query: 631 KLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRD 690
F+ N + E ++ + +QDAISDL + + E
Sbjct: 172 ------------------RFSFDFNLL--------EPSQSVNVQDAISDLAYLCSNEGAF 205
Query: 691 EIPYDREPETEFQCFIRLRKDGKKLW 716
E Y ++ +Q +RK+ KL+
Sbjct: 206 ESDYLNPIQSSYQAL--MRKNSPKLY 229
>gi|413915569|emb|CCM44165.1| DNA-cytosine methyltransferase [Staphylococcus xylosus]
Length = 359
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 65/110 (59%), Gaps = 13/110 (11%)
Query: 523 VDVICGGPPCQGVSGFNRF-RNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
+DVI GGPPCQG S NR+ +++D+P +NK ++ V+ ++PK ++ENV I+
Sbjct: 69 IDVIIGGPPCQGFSSANRYLKDEDDP----RNKLFYEYLRFVNIIRPKAFIIENVPGILT 124
Query: 582 FAKGLLGRYALARLIQM----NYQVRMGMMAAGAYGLPQFRMRVFLWGAQ 627
G YA +++++ +Y V + ++++ YG+P+ R R F G +
Sbjct: 125 RDNG----YAKEKILELTESYDYNVEVKVLSSENYGVPEIRKRAFFVGIR 170
>gi|75906326|ref|YP_320622.1| C-5 cytosine-specific DNA methylase [Anabaena variabilis ATCC
29413]
gi|75700051|gb|ABA19727.1| C-5 cytosine-specific DNA methylase [Anabaena variabilis ATCC
29413]
Length = 431
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 81/174 (46%), Gaps = 32/174 (18%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIV- 580
D+DVI G PCQG S + R D+P +N + F +V L+PKF +MENV I
Sbjct: 86 DIDVIICGSPCQGFSLMGK-RIFDDP----RNSLVFHFHRLVLELQPKFFVMENVRGITL 140
Query: 581 ----KFAKGLLGRY-ALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPY 635
+ + L+ + + ++ NYQV + A YG+PQ R R+FL GA+ KLP Y
Sbjct: 141 GEHKQILQALIHEFKSHGYQVEENYQV----LNAAHYGVPQARERLFLIGAREDVKLPKY 196
Query: 636 ALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLL---LQDAISDLPSVDNY 686
P + + L+R L + +AI DLP V+ Y
Sbjct: 197 PKPI--------------TKPAKSNNSKAKNLSRLPLCPTVWEAIGDLPEVEQY 236
>gi|228474527|ref|ZP_04059258.1| site-specific DNA methylase [Staphylococcus hominis SK119]
gi|228271190|gb|EEK12558.1| site-specific DNA methylase [Staphylococcus hominis SK119]
Length = 414
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 93/195 (47%), Gaps = 19/195 (9%)
Query: 495 EGLSNCGEKIKEFVTHGFKSKI-----LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLA 549
+ ++ I + + +G +KI LP ++D++ GG PCQG S N RN +
Sbjct: 36 DAVTTYKNNIGDHIVYGDITKIDIKNELPNEEEIDLVIGGFPCQGFSVNNIKRN----MK 91
Query: 550 DEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAA 609
D++N + + +++ KPKF + ENV ++ KG + + + Y+V ++ A
Sbjct: 92 DKRNFLYLELLKVIELKKPKFFVAENVKGLLSMEKGKVIDMIVKDFENLGYEVDYQLLNA 151
Query: 610 GAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELAR 669
YG+PQ R RV + G + + P+ + +H V P + N +D EL
Sbjct: 152 ADYGVPQARERVIIIGNRIGVE-NPFPVISH------VAPDD---NLSFFDYKSDEELKT 201
Query: 670 KLLLQDAISDLPSVD 684
+ +++AI L ++
Sbjct: 202 HVTVEEAIGFLGDIE 216
>gi|24527986|emb|CAD33713.1| putative DNA methylase [Escherichia coli]
Length = 310
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 76/164 (46%), Gaps = 18/164 (10%)
Query: 477 LKVRWRN--YGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQG 534
L + W N Y + DT++ N GE I S +P + DV+ GG PCQG
Sbjct: 22 LDIIWANDIYEDAVDTYK-----RNIGEHIVLGDIANINSSDIP---NCDVVVGGFPCQG 73
Query: 535 VSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALAR 594
S N R ++P +NK + + I+ +P + + ENV I+ KGL+ + +
Sbjct: 74 FSVANMNRKSEDP----RNKLYLEMVRIIRDKRPAYFIAENVKGILSLDKGLVIQKITSD 129
Query: 595 LIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQP----TEKLPP 634
+ Y V+ ++ YG+PQ RMRV + G + E PP
Sbjct: 130 FESLGYNVKYSLLNCADYGVPQTRMRVIILGVRKDLPDIENFPP 173
>gi|448451310|ref|ZP_21592793.1| DNA-cytosine methyltransferase [Halorubrum litoreum JCM 13561]
gi|445810744|gb|EMA60760.1| DNA-cytosine methyltransferase [Halorubrum litoreum JCM 13561]
Length = 400
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 59/118 (50%), Gaps = 18/118 (15%)
Query: 520 PGDVDVICGGPPCQGVSGFNRFRNK----DNPLADEKNKQLIVFMDIVDFLKPKFVLMEN 575
P VDV+ GGPPCQ GF+R N+ D D +N F+ +V L+P+ VLMEN
Sbjct: 100 PDGVDVVIGGPPCQ---GFSRLNNEQIELDEMEKDRRNTLFEEFLRVVSVLEPQLVLMEN 156
Query: 576 VVDIV-------KFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGA 626
V D++ ++ K L+ + Y+ ++ A YG+PQ R R+F G
Sbjct: 157 VRDLINRQTSDDRYVKDLI----VDEFAAHGYKCEYRVLEAEQYGVPQKRRRIFFMGT 210
>gi|448513883|ref|ZP_21616814.1| DNA-cytosine methyltransferase [Halorubrum distributum JCM 9100]
gi|448526607|ref|ZP_21619876.1| DNA-cytosine methyltransferase [Halorubrum distributum JCM 10118]
gi|445693036|gb|ELZ45199.1| DNA-cytosine methyltransferase [Halorubrum distributum JCM 9100]
gi|445698834|gb|ELZ50872.1| DNA-cytosine methyltransferase [Halorubrum distributum JCM 10118]
Length = 400
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 59/118 (50%), Gaps = 18/118 (15%)
Query: 520 PGDVDVICGGPPCQGVSGFNRFRNK----DNPLADEKNKQLIVFMDIVDFLKPKFVLMEN 575
P VDV+ GGPPCQ GF+R N+ D D +N F+ +V L+P+ VLMEN
Sbjct: 100 PDGVDVVIGGPPCQ---GFSRLNNEQIELDEMEKDRRNTLFEEFLRVVSVLEPQLVLMEN 156
Query: 576 VVDIV-------KFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGA 626
V D++ ++ K L+ + Y+ ++ A YG+PQ R R+F G
Sbjct: 157 VRDLINRQTSDDRYVKDLI----VDEFAAHGYKCEYRVLEAEQYGVPQKRRRIFFMGT 210
>gi|420459983|ref|ZP_14958782.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-27]
gi|393077085|gb|EJB77834.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-27]
Length = 348
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 80/189 (42%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ ++ +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLYLVKPKIFVFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + +Y + ++ A YG+PQ R RV L G K Y
Sbjct: 121 QKGQLFKQICNAFKERDYILEHAILNALDYGVPQIRERVILVGTLKRFKQKFY------- 173
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + E+ D + Y + + F
Sbjct: 174 -FPKPIKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNVF 213
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 214 LEFVRNSKE 222
>gi|296414683|ref|XP_002837027.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295632876|emb|CAZ81218.1| unnamed protein product [Tuber melanosporum]
Length = 939
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 70/138 (50%), Gaps = 10/138 (7%)
Query: 511 GFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIV-FMDIVDFLKPK 569
G S ++ P +VD I G PCQG S N+ +N D L +N L+ VD +P+
Sbjct: 598 GKYSHLVAHPDEVDFISAGSPCQGFSNANQLKNNDTGL---RNCSLVASVATAVDVFRPR 654
Query: 570 FVLMENVVDIV---KFAKGL-LGRYA--LARLIQMNYQVRMGMMAAGAYGLPQFRMRVFL 623
+ L+ENV + K + G+ + +A + ++ M YQ + + + ++G Q R R+FL
Sbjct: 655 YALLENVGGLASTRKLSTGVEVNVFAQLVCCVVGMGYQTQQFTLDSWSFGSAQSRTRLFL 714
Query: 624 WGAQPTEKLPPYALPTHD 641
A P LPP +HD
Sbjct: 715 SIAAPGTGLPPRPTRSHD 732
>gi|160873497|ref|YP_001552813.1| DNA-cytosine methyltransferase [Shewanella baltica OS195]
gi|378706736|ref|YP_005271630.1| DNA-cytosine methyltransferase [Shewanella baltica OS678]
gi|160859019|gb|ABX47553.1| DNA-cytosine methyltransferase [Shewanella baltica OS195]
gi|315265725|gb|ADT92578.1| DNA-cytosine methyltransferase [Shewanella baltica OS678]
Length = 385
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 68/120 (56%), Gaps = 6/120 (5%)
Query: 521 GDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIV 580
G+++++ GGPPCQG F+ R + + D +N+ L+ + D VD L+PK L+ENV ++
Sbjct: 74 GELELLLGGPPCQG---FSTHRINNAGIDDPRNQLLLKYFDFVDGLQPKAFLIENVAGLL 130
Query: 581 -KFAKGLLGRYALARLIQMNYQVRM-GMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALP 638
K + L + LA Y + G++ A YG+PQ R RVF++G + K+ A P
Sbjct: 131 WKRHENYLNQL-LALAETHGYTIHFCGILNAKDYGVPQNRKRVFIFGTRNDLKINNPAFP 189
>gi|300866085|ref|ZP_07110814.1| site-specific DNA-methyltransferase [Oscillatoria sp. PCC 6506]
gi|300335911|emb|CBN55972.1| site-specific DNA-methyltransferase [Oscillatoria sp. PCC 6506]
Length = 436
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 78/171 (45%), Gaps = 30/171 (17%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIV- 580
++DV+ GGPPCQG S + L D +N + F+ +V L PK+ ++ENV +
Sbjct: 79 EIDVVFGGPPCQGFSLIGK-----RSLEDPRNSLVFEFIRLVIELNPKYFVIENVGGMAI 133
Query: 581 ----KFAKGLLGRY-ALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPY 635
F ++ + I+ NYQ+ + A YG+PQ R R+FL G + LP Y
Sbjct: 134 GHHKNFIAEIINEFRENGYQIEENYQI----LNAAQYGVPQKRERLFLLGCRQDLTLPTY 189
Query: 636 ALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNY 686
P F A + +EL + DA+ DLP V+NY
Sbjct: 190 -------------PQAFTHP--ASRKTSHSELPDSPNVWDALRDLPQVENY 225
>gi|110643909|ref|YP_671639.1| type II 5-cytosoine methyltransferase [Escherichia coli 536]
gi|110345501|gb|ABG71738.1| putative type II 5-cytosoine methyltransferase [Escherichia coli
536]
Length = 305
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 76/164 (46%), Gaps = 18/164 (10%)
Query: 477 LKVRWRN--YGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQG 534
L + W N Y + DT++ N GE I S +P + DV+ GG PCQG
Sbjct: 17 LDIIWANDIYEDAVDTYK-----RNIGEHIVLGDIANINSSDIP---NCDVVVGGFPCQG 68
Query: 535 VSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALAR 594
S N R ++P +NK + + I+ +P + + ENV I+ KGL+ + +
Sbjct: 69 FSVANMNRKSEDP----RNKLYLEMVRIIRDKRPAYFIAENVKGILSLDKGLVIQKITSD 124
Query: 595 LIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQP----TEKLPP 634
+ Y V+ ++ YG+PQ RMRV + G + E PP
Sbjct: 125 FESLGYNVKYSLLNCADYGVPQTRMRVIILGVRKDLPDIENFPP 168
>gi|442321096|ref|YP_007361117.1| DNA-cytosine methyltransferase [Myxococcus stipitatus DSM 14675]
gi|441488738|gb|AGC45433.1| DNA-cytosine methyltransferase [Myxococcus stipitatus DSM 14675]
Length = 470
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 82/175 (46%), Gaps = 36/175 (20%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
VD + GGPPCQG S + L D +N ++ F+ +V L+ + + ENV
Sbjct: 74 VDCVFGGPPCQGFSLMGQ-----RALEDPRNALVLEFVRLVAELEARTFVFENV------ 122
Query: 583 AKGLL---GRYALARLIQ----MNYQVRM--GMMAAGAYGLPQFRMRVFLWGAQPTEKLP 633
KGL R L L++ + Y+ RM ++ A +YG+PQ R R+ L G + LP
Sbjct: 123 -KGLTVGNHRRFLDELVRAFDDVGYEARMPWQVLDAASYGVPQHRERLILLGVRKGGTLP 181
Query: 634 PYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYES 688
Y PT P ++ER+ VA G ++A+ DLP D +E+
Sbjct: 182 RYPAPT-------TTPADWERDLVAPPSGPTC--------REALGDLPDADAFEA 221
>gi|448494453|ref|ZP_21609440.1| DNA-cytosine methyltransferase [Halorubrum californiensis DSM
19288]
gi|445689288|gb|ELZ41528.1| DNA-cytosine methyltransferase [Halorubrum californiensis DSM
19288]
Length = 389
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 76/175 (43%), Gaps = 40/175 (22%)
Query: 520 PGDVDVICGGPPCQGVSGFNRFRNK----DNPLADEKNKQLIVFMDIVDFLKPKFVLMEN 575
P VDV+ GGPPCQ GF+R N+ D D +N F+ +V L+P+ VLMEN
Sbjct: 89 PDGVDVVIGGPPCQ---GFSRLNNEQIELDEMEKDRRNTLFEEFLRVVSVLEPQLVLMEN 145
Query: 576 VVDIV-------KFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQP 628
V D++ ++ K L+ + Y+ ++ A YG+PQ R R+F G
Sbjct: 146 VRDLINRQTSDDRYVKDLI----VDEFAAHGYKCEYRVLEAEQYGVPQKRRRIFFMGTD- 200
Query: 629 TEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSV 683
DV +R PT E N E L DA DLP++
Sbjct: 201 -----------RDVPIRFPEPTTPEGNWRTAGEA----------LADAGDDLPNM 234
>gi|392862764|gb|EAS36569.2| DNA (cytosine-5-)-methyltransferase [Coccidioides immitis RS]
Length = 1117
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 68/134 (50%), Gaps = 9/134 (6%)
Query: 511 GFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKF 570
G +S ++ G V+ I G PCQG S N K N ++ + + VDF +P++
Sbjct: 674 GQRSDLVAKLGQVEFISAGSPCQGYSLANS--RKGNKVSLRNSSMIASVAAYVDFYRPQY 731
Query: 571 VLMENVVDIVKFAKGLLGRYALARLI----QMNYQVRMGMMAAGAYGLPQFRMRVFLWGA 626
++ENV + A R L++LI + YQ+R+ + A +YG PQ R R+FL A
Sbjct: 732 AILENVPAM---ASKTHERNPLSQLICAFVGLGYQLRLMHLDAWSYGAPQSRSRLFLLIA 788
Query: 627 QPTEKLPPYALPTH 640
P +LP + TH
Sbjct: 789 APGLQLPEHPALTH 802
>gi|420448488|ref|ZP_14947368.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-44]
gi|393065842|gb|EJB66670.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-44]
Length = 222
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 77/180 (42%), Gaps = 33/180 (18%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ I+D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRILDLVKPKIFVFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + Y + ++ A YG+PQ R RV L G + K + P
Sbjct: 121 QKGQLFQRICNAFKERGYILEHAILNALDYGVPQVRERVILVGTHKSFK-QKFHFPK--- 176
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + E+ D + Y + + F
Sbjct: 177 ----PIKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNVF 213
>gi|420495802|ref|ZP_14994366.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-23]
gi|393112113|gb|EJC12634.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-23]
Length = 351
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 79/189 (41%), Gaps = 33/189 (17%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ ++D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFVFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + Y + ++ A YG Q R RV L GA K Y
Sbjct: 121 QKGQLFKQICNAFKERGYILEHAILNALDYGALQIRERVILVGALKRFKQKFY------- 173
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + E+ D + Y + + F
Sbjct: 174 -FPKPIKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNVF 213
Query: 703 QCFIRLRKD 711
F+R K+
Sbjct: 214 LEFVRNSKE 222
>gi|409052037|gb|EKM61513.1| hypothetical protein PHACADRAFT_204683 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1320
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 76/177 (42%), Gaps = 22/177 (12%)
Query: 521 GDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIV 580
GD+D I G P K N D K+ ++ + VDFL+PK ENV +
Sbjct: 911 GDIDCIVAGFPWH--VKLVMLLPKAN---DRKSHLILNLLSWVDFLEPKLCFFENVCGFL 965
Query: 581 KFAKGLL--GRYALA-------------RLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWG 625
++ + RY L L+ M YQV+ ++ A YG PQ R+R FL
Sbjct: 966 QYNLNSIQASRYKLEGGIQMGGLKFLVRALVTMGYQVKFAVLQAAHYGTPQTRVRFFLIA 1025
Query: 626 AQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELA--RKLLLQDAISDL 680
AQ + +P + P + + + +F +A + +A R + + DAI DL
Sbjct: 1026 AQLGQPMPNFPAPLYSFTPKDALEIKFSHGLIARPINTENGIAPFRYVTVDDAIGDL 1082
>gi|344942873|ref|ZP_08782160.1| DNA-cytosine methyltransferase [Methylobacter tundripaludum SV96]
gi|344260160|gb|EGW20432.1| DNA-cytosine methyltransferase [Methylobacter tundripaludum SV96]
Length = 359
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 60/105 (57%), Gaps = 8/105 (7%)
Query: 524 DVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIV--K 581
D++ GGPPCQG F+ R KD + D +NK ++ + + V LKPK LMENV I+ +
Sbjct: 80 DIVLGGPPCQG---FSVHRIKDAGIDDPRNKLILRYFEYVAVLKPKVFLMENVPGILWSR 136
Query: 582 FAKGLLGRYALARLIQMNYQVRMGM-MAAGAYGLPQFRMRVFLWG 625
K L YA + + YQ+ + + A YGLPQ R RVF+ G
Sbjct: 137 HKKFLDAFYAEGK--KAGYQLMQPVTLDARDYGLPQRRKRVFILG 179
>gi|119194775|ref|XP_001247991.1| hypothetical protein CIMG_01762 [Coccidioides immitis RS]
Length = 1040
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 68/134 (50%), Gaps = 9/134 (6%)
Query: 511 GFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKF 570
G +S ++ G V+ I G PCQG S N K N ++ + + VDF +P++
Sbjct: 597 GQRSDLVAKLGQVEFISAGSPCQGYSLANS--RKGNKVSLRNSSMIASVAAYVDFYRPQY 654
Query: 571 VLMENVVDIVKFAKGLLGRYALARLI----QMNYQVRMGMMAAGAYGLPQFRMRVFLWGA 626
++ENV + A R L++LI + YQ+R+ + A +YG PQ R R+FL A
Sbjct: 655 AILENVPAM---ASKTHERNPLSQLICAFVGLGYQLRLMHLDAWSYGAPQSRSRLFLLIA 711
Query: 627 QPTEKLPPYALPTH 640
P +LP + TH
Sbjct: 712 APGLQLPEHPALTH 725
>gi|86142380|ref|ZP_01060890.1| putative 5-methylcytosine methyltransferase [Leeuwenhoekiella
blandensis MED217]
gi|85831132|gb|EAQ49589.1| putative 5-methylcytosine methyltransferase [Leeuwenhoekiella
blandensis MED217]
Length = 332
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 86/182 (47%), Gaps = 9/182 (4%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
++DV+ GGPPCQG S K + D +NK F+ +V ++P + +MENV +
Sbjct: 72 EIDVVIGGPPCQGFSIAGNIGRKF--IDDPRNKLFKEFVRVVKVVEPTYFVMENVARLYN 129
Query: 582 FAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHD 641
KG + + + Y+V ++ + YG+PQ R RV G + ++K+ P +
Sbjct: 130 HNKGNTRKEIINDFENLGYKVECKILNSADYGVPQVRKRVIFIGTKNSQKI---LFPKKE 186
Query: 642 VVLRGVIPTEFERNTVAYDEGQQAELARKLLL---QDAISDLPSVDNYESRDEIPYDREP 698
V + V E + GQ++++ + + + + + V + R+EIP P
Sbjct: 187 VD-KYVTVKEALSSYPKLKSGQESKIPNHIAMSHSEQMLHKMSFVSDGGDRNEIPEQIRP 245
Query: 699 ET 700
++
Sbjct: 246 KS 247
>gi|448482863|ref|ZP_21605634.1| DNA-cytosine methyltransferase [Halorubrum arcis JCM 13916]
gi|445821149|gb|EMA70945.1| DNA-cytosine methyltransferase [Halorubrum arcis JCM 13916]
Length = 400
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 59/118 (50%), Gaps = 18/118 (15%)
Query: 520 PGDVDVICGGPPCQGVSGFNRFRNK----DNPLADEKNKQLIVFMDIVDFLKPKFVLMEN 575
P VDV+ GGPPCQ GF+R N+ D D +N F+ +V L+P+ VLMEN
Sbjct: 100 PDGVDVVIGGPPCQ---GFSRLNNEQIELDEMEKDRRNTLFEEFLRVVSVLEPQLVLMEN 156
Query: 576 VVDIV-------KFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGA 626
V D++ ++ K L+ + Y+ ++ A YG+PQ R R+F G
Sbjct: 157 VRDLINRQTSDDRYVKDLI----VDEFAAHGYKCEYRVLEAEQYGVPQKRRRIFFMGT 210
>gi|427718814|ref|YP_007066808.1| DNA-cytosine methyltransferase [Calothrix sp. PCC 7507]
gi|427351250|gb|AFY33974.1| DNA-cytosine methyltransferase [Calothrix sp. PCC 7507]
Length = 418
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 83/171 (48%), Gaps = 27/171 (15%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIV- 580
++DV+ G PCQG S + R D+P +N + F +V L+PK+ +MENV I
Sbjct: 79 EIDVVICGSPCQGFSLMGK-RVFDDP----RNSLVFHFHRLVLELQPKYFVMENVRGITL 133
Query: 581 ----KFAKGLLGRY-ALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPY 635
K + L+ + A ++ NYQV + A YG+PQ R R+FL GA+ +LP Y
Sbjct: 134 GEHKKILQTLINEFQAKGYTVEENYQV----LNAAHYGVPQARERLFLLGAREDVELPKY 189
Query: 636 ALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNY 686
P P + ++ + + + L + DAI D+P V+ Y
Sbjct: 190 PQPITK-------PAKPHKSKI-----KLSNLPTSPTVWDAIKDIPEVEQY 228
>gi|46580156|ref|YP_010964.1| C-5 cytosine-specific DNA methylase [Desulfovibrio vulgaris str.
Hildenborough]
gi|387153409|ref|YP_005702345.1| DNA-cytosine methyltransferase [Desulfovibrio vulgaris RCH1]
gi|46449573|gb|AAS96223.1| C-5 cytosine-specific DNA methylase family protein [Desulfovibrio
vulgaris str. Hildenborough]
gi|311233853|gb|ADP86707.1| DNA-cytosine methyltransferase [Desulfovibrio vulgaris RCH1]
Length = 369
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 67/125 (53%), Gaps = 9/125 (7%)
Query: 520 PGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDI 579
PG VD+I GGPPCQ GF+ R K + D +N L+ + + V ++P++ L+ENV +
Sbjct: 83 PGGVDIIMGGPPCQ---GFSTHRIKGAGIDDPRNTLLLRYFEYVQAIRPRYFLVENVPGL 139
Query: 580 V--KFAKGLLGRYALARLIQMNYQVRMG-MMAAGAYGLPQFRMRVFLWGAQPTEKLPPY- 635
+ + + L Y LA + Y V ++ A YG+PQ R RVF+ G LP +
Sbjct: 140 LWPRHEEYLQRFYKLA--TEAGYHVSPPQVLNARDYGVPQNRKRVFILGTAGGHTLPDWP 197
Query: 636 ALPTH 640
PTH
Sbjct: 198 PRPTH 202
>gi|41584550|gb|AAS09913.1| BsmBI M1-M2 methyltransferase fusion protein [Geobacillus
stearothermophilus]
Length = 1068
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 62/113 (54%), Gaps = 7/113 (6%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D+I GG PCQG S +R D DE+N + F+ +V L P +VL+ENV ++
Sbjct: 866 LDLIAGGLPCQGFSTAG-WRKPD----DERNALVTYFLQVVQKLMPNYVLIENVEGLINM 920
Query: 583 AKGLLGRYALARLIQMNYQVRMG--MMAAGAYGLPQFRMRVFLWGAQPTEKLP 633
KGL+ + L ++ Y +++A YG+PQ R RVF+ A+ +LP
Sbjct: 921 NKGLVLKSIHEVLDELGYIYYKNPWVLSAEQYGVPQMRKRVFIVAAKKGLELP 973
>gi|350271400|ref|YP_004882708.1| cytosine-specific methyltransferase [Oscillibacter valericigenes
Sjm18-20]
gi|348596242|dbj|BAL00203.1| cytosine-specific methyltransferase [Oscillibacter valericigenes
Sjm18-20]
Length = 360
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 69/124 (55%), Gaps = 10/124 (8%)
Query: 521 GDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIV 580
G++D++ G PCQG F+R R ++ D +N+ ++ F+ +V L+PK + MENV ++
Sbjct: 70 GELDLLAGCSPCQG---FSRLRKGESGSTDPRNQLVLEFLRLVRGLRPKTIFMENVPGLI 126
Query: 581 --KFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALP 638
++ K L + L L ++ Y V ++ YG+PQFR R L G++ K P LP
Sbjct: 127 NTEYGKKLFDKI-LPELTRLGYAVDYKIVDTADYGVPQFRRRFVLLGSR--YKRHPIELP 183
Query: 639 --TH 640
TH
Sbjct: 184 ETTH 187
Score = 46.6 bits (109), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 54/102 (52%), Gaps = 15/102 (14%)
Query: 342 LDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPET-----EVRNESA 396
++L+SGCG +S+GL AG ++++ AV+IN+ A + +LNHP +VRN +A
Sbjct: 5 IELFSGCGGLSSGLI----AAGFDILS--AVEINQIAADTYRLNHPNVNLIVDDVRNVTA 58
Query: 397 EDFLTLLREWEKLCISFSLIARKDPQQQLYSFNDDGESEEDD 438
+LLR+ L+A P Q +S GES D
Sbjct: 59 A---SLLRQHNLRIGELDLLAGCSPCQG-FSRLRKGESGSTD 96
>gi|443326789|ref|ZP_21055431.1| DNA-methyltransferase Dcm [Xenococcus sp. PCC 7305]
gi|442793582|gb|ELS03027.1| DNA-methyltransferase Dcm [Xenococcus sp. PCC 7305]
Length = 422
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 65/144 (45%), Gaps = 14/144 (9%)
Query: 499 NCGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIV 558
+C E + GFK+ D+DVI GGPPCQG S D L D +N+ +
Sbjct: 60 SCEELLAAIQNKGFKT-------DIDVITGGPPCQGYSYMG-----DRILEDPRNQLIFE 107
Query: 559 FMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVR--MGMMAAGAYGLPQ 616
+ I+ ++PK+ + ENV I + Q NY + + ++ + YG PQ
Sbjct: 108 YARIISTIRPKYFIFENVPGIASGKHRQFLTELIKNFNQNNYSIVEPIQILDSSLYGAPQ 167
Query: 617 FRMRVFLWGAQPTEKLPPYALPTH 640
R R+ L G + P Y PTH
Sbjct: 168 KRKRLILIGYRNDMPKPNYPQPTH 191
>gi|218441171|ref|YP_002379500.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7424]
gi|218173899|gb|ACK72632.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7424]
Length = 415
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 92/195 (47%), Gaps = 45/195 (23%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDI-V 580
++DV+ GGPPCQG S + R D+P +N+ + F+ +V L PK+ +MENV + +
Sbjct: 79 EIDVVFGGPPCQGFSLMGK-RLIDDP----RNELIFHFLRLVLELNPKYFVMENVPGLAL 133
Query: 581 KFAKGLLGRYAL-----ARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPY 635
K L R L I NYQ+ + A YG+PQ R R+FL G + + LPP
Sbjct: 134 GQHKQFLDRIILEFNQKGYKIDNNYQI----LNAANYGVPQNRKRLFLLGGK--KNLPPL 187
Query: 636 ALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNY---ESRDEI 692
P +A +K + +AI DLP V++Y E+RD +
Sbjct: 188 KYP-------------------------EAISDKKTTVWEAIQDLPEVNDYPDLETRDWV 222
Query: 693 PYDREPETEFQCFIR 707
+ ++E+ +R
Sbjct: 223 IVEYGDKSEYAQKLR 237
>gi|396578258|gb|AFM52076.2| DNA methyltransferase [Mycoplasma bovis HB0801]
Length = 594
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 88/194 (45%), Gaps = 36/194 (18%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+++I GGPPCQG S + K L D +N + ++DIV+ + P+ ++ENV ++
Sbjct: 75 INMIIGGPPCQGFSN----KGKKQGLDDPRNFLFLEYLDIVEKVSPELFIIENVKTMLIA 130
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG + ++ M Y++ G++ A +G+PQ R R + K +LP +
Sbjct: 131 VKGYFIDQIVEKIEMMGYKISYGVLNAKDFGVPQNRARAIIIA----HKEKTISLPRSN- 185
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
+ ++DAISDL +++ + E Y ++E+
Sbjct: 186 -------------------------GNRTTVKDAISDLAYLNSADGNYESQYISNAQSEY 220
Query: 703 QCFIRLRKDGKKLW 716
Q ++RK +L+
Sbjct: 221 QK--QMRKGSLRLF 232
>gi|429860368|gb|ELA35108.1| DNA methyltransferase dim-2 [Colletotrichum gloeosporioides Nara
gc5]
Length = 1133
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 66/139 (47%), Gaps = 20/139 (14%)
Query: 512 FKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIV-FMDIVDFLKPKF 570
F K+ P G VD + G PC GF+R KN+ L+ F +D +P++
Sbjct: 724 FSDKV-PKIGTVDFVSAGSPC---PGFSRLTVDKATPEQRKNQSLVAAFASFIDTYRPRY 779
Query: 571 VLMENVVDIVK---------FAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRV 621
L+ENV++IV+ F + + L+ + YQ ++ A +YG PQ R RV
Sbjct: 780 GLLENVLEIVQPRREKNEDVFCQ------LICALVGLGYQTHFFLLDAWSYGSPQSRSRV 833
Query: 622 FLWGAQPTEKLPPYALPTH 640
FL A P KLP L +H
Sbjct: 834 FLCFAAPGHKLPEPPLQSH 852
>gi|339321213|ref|YP_004683735.1| adenine-specific DNA-methyltransferase [Mycoplasma bovis Hubei-1]
gi|392430292|ref|YP_006471337.1| DNA methyltransferase [Mycoplasma bovis HB0801]
gi|338227338|gb|AEI90400.1| adenine-specific DNA-methyltransferase [Mycoplasma bovis Hubei-1]
Length = 593
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 88/194 (45%), Gaps = 36/194 (18%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+++I GGPPCQG S + K L D +N + ++DIV+ + P+ ++ENV ++
Sbjct: 74 INMIIGGPPCQGFSN----KGKKQGLDDPRNFLFLEYLDIVEKVSPELFIIENVKTMLIA 129
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG + ++ M Y++ G++ A +G+PQ R R + K +LP +
Sbjct: 130 VKGYFIDQIVEKIEMMGYKISYGVLNAKDFGVPQNRARAIIIA----HKEKTISLPRSN- 184
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
+ ++DAISDL +++ + E Y ++E+
Sbjct: 185 -------------------------GNRTTVKDAISDLAYLNSADGNYESQYISNAQSEY 219
Query: 703 QCFIRLRKDGKKLW 716
Q ++RK +L+
Sbjct: 220 QK--QMRKGSLRLF 231
>gi|189423373|ref|YP_001950550.1| DNA-cytosine methyltransferase [Geobacter lovleyi SZ]
gi|189419632|gb|ACD94030.1| DNA-cytosine methyltransferase [Geobacter lovleyi SZ]
Length = 375
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 83/191 (43%), Gaps = 30/191 (15%)
Query: 500 CGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVF 559
C + IK+ F+ + + CG PCQ + +N ++P DE+ L F
Sbjct: 66 CDKSIKKLTVLDFQHTLDKYKDSYKLFCGCAPCQPFTK----QNTESPKQDERKDLLTYF 121
Query: 560 MDIVDFLKPKFVLMENVVDIVKFAKGLLGRY-ALARLIQ-MNYQVRMGMMAAGAYGLPQF 617
IV +P FV +ENV + K G + A L+ +NYQ+ G++AA YG PQ
Sbjct: 122 GTIVKECEPDFVFVENVPGLQKVPNHKHGPFPAFEELLHKLNYQIAYGVVAAQDYGAPQL 181
Query: 618 RMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAI 677
R R L ++ E P PTH G+ ++ K + DAI
Sbjct: 182 RRRFVLLASRHGEISIPE--PTH---------------------GKDSDTPYKTVY-DAI 217
Query: 678 SDLPSVDNYES 688
+DLP++ ES
Sbjct: 218 ADLPAITAGES 228
>gi|428299006|ref|YP_007137312.1| DNA-cytosine methyltransferase [Calothrix sp. PCC 6303]
gi|428235550|gb|AFZ01340.1| DNA-cytosine methyltransferase [Calothrix sp. PCC 6303]
Length = 438
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 75/134 (55%), Gaps = 14/134 (10%)
Query: 503 KIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDI 562
+I++ + H ++ G++ + GGPPCQG S + + L D++N+ ++ F+++
Sbjct: 65 EIRDIIQHKYQD----WDGEIAAVIGGPPCQGFSVAGKQK-----LDDDRNQLVLKFINL 115
Query: 563 VDFLKPKFVLMENV--VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMR 620
V L P +MENV ++ KFA G+ G A+A LI+ Y + ++ A YG+PQ R R
Sbjct: 116 VIELNPSMFVMENVPAIEWKKFA-GITGN-AIA-LIEEQYILSKWLLTASDYGVPQKRQR 172
Query: 621 VFLWGAQPTEKLPP 634
G++ E +PP
Sbjct: 173 AIWIGSKFGEVIPP 186
>gi|257386518|ref|YP_003176291.1| DNA-cytosine methyltransferase [Halomicrobium mukohataei DSM 12286]
gi|257168825|gb|ACV46584.1| DNA-cytosine methyltransferase [Halomicrobium mukohataei DSM 12286]
Length = 452
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 68/133 (51%), Gaps = 23/133 (17%)
Query: 521 GDVDVICGGPPCQ-----GVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMEN 575
G++D++ GGPPC G S N +DN +D+++ F+ VD +PK LMEN
Sbjct: 69 GELDLVAGGPPCPTFSLVGRSKINSIEGRDN-QSDDRHLLYEDFLRFVDHYQPKAFLMEN 127
Query: 576 V--------------VDIVKFAKGLLGRYALARL-IQMNYQVRMGMMAAGAYGLPQFRMR 620
V VD +K + + G +A L + +NY VR+ ++ + YG+PQ R R
Sbjct: 128 VEGMLSAENEDGKPVVDTIK--EQMRGEREVADLDLDLNYSVRVQLLDSADYGIPQHRKR 185
Query: 621 VFLWGAQPTEKLP 633
+F G + E+ P
Sbjct: 186 LFFIGNRIGEENP 198
>gi|434405034|ref|YP_007147919.1| DNA-methyltransferase Dcm [Cylindrospermum stagnale PCC 7417]
gi|428259289|gb|AFZ25239.1| DNA-methyltransferase Dcm [Cylindrospermum stagnale PCC 7417]
Length = 466
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 65/120 (54%), Gaps = 7/120 (5%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
++DV+ GGPPCQG S + RN D+P +N + ++ +V L+PKFV++ENV +
Sbjct: 107 EIDVVFGGPPCQGFSLIGK-RNLDDP----RNGLVDHYIRLVLELQPKFVVLENVKGMTV 161
Query: 582 FAKGLLGRYALARLIQMNYQV--RMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPT 639
+ + + YQV ++ A YG+PQ R R+FL + +LP Y LPT
Sbjct: 162 GKHQEFILEIIYKFEENGYQVLKNYKILNAAEYGVPQNRERLFLLACRQDLELPNYPLPT 221
>gi|417996763|ref|ZP_12637038.1| C-5 cytosine-specific DNA methylase [Lactobacillus casei M36]
gi|410534759|gb|EKQ09397.1| C-5 cytosine-specific DNA methylase [Lactobacillus casei M36]
Length = 337
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 65/128 (50%), Gaps = 4/128 (3%)
Query: 521 GDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIV 580
G VD++ G PPCQG + NR NK +D++N + ++ V +KP F++MENV I+
Sbjct: 66 GHVDIVAGCPPCQGFTQMNR-NNKRRAYSDKRNILIEEYLRAVKIIKPNFIMMENVPQII 124
Query: 581 KFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTH 640
+ + L L ++ Y + + +G+PQ R R+ L GA + P+ + T
Sbjct: 125 YYDR---FNSMLEELKEIGYSIDFKEINVKDFGIPQSRRRLVLIGALSHDVDFPFRMNTP 181
Query: 641 DVVLRGVI 648
+R I
Sbjct: 182 VKTVRDAI 189
>gi|428297014|ref|YP_007135320.1| DNA-cytosine methyltransferase [Calothrix sp. PCC 6303]
gi|428233558|gb|AFY99347.1| DNA-cytosine methyltransferase [Calothrix sp. PCC 6303]
Length = 437
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 80/158 (50%), Gaps = 15/158 (9%)
Query: 521 GDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIV 580
G++DV+ GGPPCQG S + N + DE+N + F+ +V L P +MENV I
Sbjct: 70 GEIDVVFGGPPCQGFS----VAGQQN-IEDERNGLVREFVRLVLELNPLAAIMENVPGIE 124
Query: 581 KFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTH 640
G + L +++ +Y + + A YG+PQ R RVF ++ E +PP P H
Sbjct: 125 NQKFGCI-TANLQAVLEEHYFLSKWNLNASNYGVPQARKRVFFVASKFDEIVPPQQFPQH 183
Query: 641 DVVLRGVI------PTEFERNT-VAYDEGQQAELARKL 671
+V R I P ++NT VA + ++ E AR L
Sbjct: 184 NV--RDAITDLLTFPLLPKQNTQVASPDWEKGEYARYL 219
>gi|108763142|ref|YP_631786.1| DNA-cytosine methyltransferase [Myxococcus xanthus DK 1622]
gi|108467022|gb|ABF92207.1| DNA-cytosine methyltransferase [Myxococcus xanthus DK 1622]
Length = 505
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 92/215 (42%), Gaps = 30/215 (13%)
Query: 523 VDVICGGPPCQGVSGFNR------FRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
VDVI GGPPC + R F++ + D + + ++ V LKP ++MENV
Sbjct: 97 VDVIVGGPPCPAFTRVGRAKLREVFQHPEAFKQDPRATLYVQYLQYVQALKPLALVMENV 156
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQP-TEKLPPY 635
DI+ + LG L M+Y+ ++ A +Y +PQ R R FL T P +
Sbjct: 157 PDILNWGGHNLGDEICESLKAMDYRCAYTLLNAASYDVPQMRERFFLVAVHKETRSDPSF 216
Query: 636 ALPT------------HDVVLRGVIPTEFERNT-VAYDEGQQAELARKLLLQDAISDLPS 682
+PT +V L+ V+ ++ + A + + +A++DLP
Sbjct: 217 PVPTRKVDFPRGYSSSRNVALKNVLAQSSDKGSWYVAPPAAPANAPPAVTVAEALADLPE 276
Query: 683 V-DNYESRD---------EIPYDREPETEFQCFIR 707
+ D+ +RD +P+ P + F +R
Sbjct: 277 LTDHLHNRDRRGARHLNGRVPHTTAPHSAFARLMR 311
>gi|159897859|ref|YP_001544106.1| DNA-cytosine methyltransferase [Herpetosiphon aurantiacus DSM 785]
gi|159890898|gb|ABX03978.1| DNA-cytosine methyltransferase [Herpetosiphon aurantiacus DSM 785]
Length = 415
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 58/124 (46%), Gaps = 21/124 (16%)
Query: 521 GDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIV 580
GD+D++ GGPPCQG S NR +K+ DE N + F+D V PK L+ENV +
Sbjct: 91 GDLDILMGGPPCQGYSSSNRQASKET--RDELNNMVKSFLDRVQDFSPKMFLLENVQGVT 148
Query: 581 KFAKGLLGR-------------------YALARLIQMNYQVRMGMMAAGAYGLPQFRMRV 621
A R Y + R ++ Y + ++ A +G+PQ R R
Sbjct: 149 WTASTDEMRIPSEQLSFIDNEEIADVKDYLVHRARELGYHIWYSVLDAADFGVPQHRKRF 208
Query: 622 FLWG 625
FL+G
Sbjct: 209 FLFG 212
>gi|20068992|gb|AAM09644.1|AF458984_2 m6 adenine and m5 cytosine DNA methyltransferase [Acinetobacter
lwoffii]
Length = 952
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 74/171 (43%), Gaps = 24/171 (14%)
Query: 513 KSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVL 572
K KI +D++CGGPPCQG S + R D+P +N+ + F++ + + PK V+
Sbjct: 784 KQKIYQYANKIDILCGGPPCQGFSQAGK-RIIDDP----RNQLFLEFIESISVINPKVVV 838
Query: 573 MENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKL 632
MENV + KG L ++ Y ++ YG+PQ R RV + G
Sbjct: 839 MENVQGFLTLDKGNFYDQTKELLEELGYVCEGRLLNTVHYGVPQKRKRVIILGVHKN--- 895
Query: 633 PPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSV 683
+ +H + EF DE QQ +AI+DL V
Sbjct: 896 ---LIGSHKI-------EEFFPTPTTLDESQQVSAF------EAIADLEHV 930
>gi|11138959|gb|AAG31558.1| SgrAIM methylase [Streptomyces griseus]
Length = 429
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 59/113 (52%), Gaps = 6/113 (5%)
Query: 521 GDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIV 580
G++D++ GGPPCQG S L D +N+ ++ ++ L+P+ LMENV +++
Sbjct: 99 GNIDLLFGGPPCQGYSQIG-----TRILDDPRNQLYAEYVRVLKTLRPRVFLMENVPNML 153
Query: 581 KFAKGLLGRYALARLIQMNY-QVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKL 632
KG R LA + Y + ++AA +G+PQ R R +G + E L
Sbjct: 154 LMDKGRFKREVLAAFAEAGYSNCGVTVVAASDHGVPQLRRRAIFFGVRDGENL 206
>gi|116627564|ref|YP_820183.1| site-specific DNA methylase [Streptococcus thermophilus LMD-9]
gi|116100841|gb|ABJ65987.1| Site-specific DNA methylase [Streptococcus thermophilus LMD-9]
Length = 406
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 64/125 (51%), Gaps = 6/125 (4%)
Query: 519 LPG-DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVV 577
+PG D+DV+ GG PCQG S N RN + D +N + + ++ +PKF + ENV
Sbjct: 62 IPGTDIDVVIGGFPCQGFSIANVKRN----MEDHRNFLYLELLRVIKDKQPKFFVAENVK 117
Query: 578 DIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYAL 637
++ KG + + + Y+V ++ A YG+PQ R RV + G + P+
Sbjct: 118 GLLSMQKGKVINMIVKDFESLGYKVDYQLLNAAEYGVPQARERVIIIGNRIGID-NPFPK 176
Query: 638 PTHDV 642
PTH +
Sbjct: 177 PTHKI 181
>gi|372269857|ref|ZP_09505905.1| DNA (cytosine-5-)-methyltransferase [Marinobacterium stanieri S30]
Length = 427
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 68/130 (52%), Gaps = 10/130 (7%)
Query: 520 PGDVDVICGGPPCQGVS-GFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVD 578
PG++D++ GGPPCQG S +F + D +N L ++ ++ ++PK+ +MENV
Sbjct: 71 PGELDILIGGPPCQGFSTAGTKFWD------DPRNHLLRSYVKALEVVRPKWFIMENVEG 124
Query: 579 IVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALP 638
++ KG A I++ Y +R+ + + YG+PQ R RV + G + Y LP
Sbjct: 125 LLTSNKGKYIHEAAKAFIEIGYFIRIEKVYSQEYGVPQRRKRVLIVGNRLGHN---YKLP 181
Query: 639 THDVVLRGVI 648
+ + G I
Sbjct: 182 EATIRVSGQI 191
>gi|108805045|ref|YP_644982.1| DNA (cytosine-5-)-methyltransferase [Rubrobacter xylanophilus DSM
9941]
gi|108766288|gb|ABG05170.1| DNA (cytosine-5-)-methyltransferase [Rubrobacter xylanophilus DSM
9941]
Length = 405
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 83/186 (44%), Gaps = 27/186 (14%)
Query: 526 ICGGPPCQGVS--GFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFA 583
+ GGPPCQG S G RF + DE+N + +++ L+P + ENV ++
Sbjct: 227 VLGGPPCQGFSTAGNRRF------VGDERNWLFRQYKAVLERLQPDGFVFENVPGLLNME 280
Query: 584 KGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWG--AQPTEKLPPYALPTHD 641
G + R L Q+ + + A YG+PQ R RV L G + E PP +
Sbjct: 281 GGSVFRAIRDELASTTKQLVVWRLRAEEYGVPQRRTRVILVGDSSGDVESEPPKTV---- 336
Query: 642 VVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETE 701
T+ N ++ EL + ++DA+SDLP++ E Y +PE
Sbjct: 337 --------TQLGNNMSLFN-----ELPAAVSVRDALSDLPALRPGEDGSHKDYTHDPEHP 383
Query: 702 FQCFIR 707
+Q F+R
Sbjct: 384 YQEFVR 389
>gi|452981219|gb|EME80979.1| hypothetical protein MYCFIDRAFT_114349, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 923
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 61/117 (52%), Gaps = 10/117 (8%)
Query: 521 GDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIV 580
G++D+I G PCQG S ++D+P + + + + VDF P+++++ENVV +
Sbjct: 595 GEIDLISAGSPCQGFSKLQH--DRDSPRSRKNASMVASVVSFVDFYVPEYLILENVVTMT 652
Query: 581 KFAKGLLG--------RYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPT 629
+ G ++ L+ + YQV+ +M + +YG PQ R RVF+ P+
Sbjct: 653 DHPRDKKGPIPEQNVFSQVISALVGLGYQVQQFLMDSWSYGSPQQRSRVFIVATAPS 709
>gi|420402021|ref|ZP_14901212.1| cytosine-specific methyltransferase [Helicobacter pylori CPY6081]
gi|393017840|gb|EJB18992.1| cytosine-specific methyltransferase [Helicobacter pylori CPY6081]
Length = 188
Score = 65.9 bits (159), Expect = 7e-08, Method: Composition-based stats.
Identities = 34/103 (33%), Positives = 53/103 (51%), Gaps = 6/103 (5%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ ++D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKMFVFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWG 625
KG L + + Y + ++ A YG+PQ R RVFL G
Sbjct: 121 QKGQLFKQICNAFKERGYILEHAILNALDYGVPQIRERVFLVG 163
>gi|336392213|ref|ZP_08573612.1| cytosine specific DNA methyltransferase [Lactobacillus coryniformis
subsp. torquens KCTC 3535]
Length = 349
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 83/186 (44%), Gaps = 33/186 (17%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
DV +I GGPPCQG S + K L D +N F D+V F+KP+ ++ENV +++
Sbjct: 67 DVGMIIGGPPCQGFSQ----KGKRLSLRDPRNYLFRYFFDVVKFVKPENFVIENVPNLLT 122
Query: 582 FAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHD 641
A G + Y+V ++ A YG+PQ R R + G+
Sbjct: 123 AANGYFKNEIYELFESLGYEVISDVLNAKDYGVPQARRRAIIIGS--------------- 167
Query: 642 VVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETE 701
+N + + + +Q E+ + DAISDL +++ E Y P+++
Sbjct: 168 ----------LRKNVLKFPK-KQNEMTT---VWDAISDLAFLESGEGEQVQEYKFIPQSK 213
Query: 702 FQCFIR 707
+Q +R
Sbjct: 214 YQEMMR 219
>gi|392392195|ref|YP_006428797.1| DNA-methyltransferase Dcm [Desulfitobacterium dehalogenans ATCC
51507]
gi|390523273|gb|AFL99003.1| DNA-methyltransferase Dcm [Desulfitobacterium dehalogenans ATCC
51507]
Length = 359
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 59/106 (55%), Gaps = 6/106 (5%)
Query: 521 GDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIV 580
G +D++ GGPPCQG S K +P DE++K + +MD+V+ LKPK +MENV +
Sbjct: 65 GSIDLVFGGPPCQGFS----VAGKMDP-DDERSKLIWEYMDVVNILKPKIFVMENVKALG 119
Query: 581 KFAKGLLGRYAL-ARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWG 625
K + R + +R M Y ++ A +G+PQ R RVF G
Sbjct: 120 KLQRWQSVREKIVSRAHDMGYTCFYKVLNAADFGVPQKRERVFFIG 165
>gi|303310981|ref|XP_003065502.1| DNA (cytosine-5)-methyltransferase, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|240105164|gb|EER23357.1| DNA (cytosine-5)-methyltransferase, putative [Coccidioides
posadasii C735 delta SOWgp]
Length = 1117
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 67/134 (50%), Gaps = 9/134 (6%)
Query: 511 GFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKF 570
G S ++ G V+ I G PCQG S N K N ++ + + VDF +P++
Sbjct: 674 GQGSDLVAKLGQVEFISAGSPCQGYSLANS--RKGNKVSLRNSSMIASVAAYVDFYRPQY 731
Query: 571 VLMENVVDIVKFAKGLLGRYALARLI----QMNYQVRMGMMAAGAYGLPQFRMRVFLWGA 626
++ENV + A R L++LI + YQ+R+ + A +YG PQ R R+FL A
Sbjct: 732 AILENVPAM---ASKTHERNPLSQLICAFVGLGYQLRLMHLDAWSYGAPQSRSRLFLLIA 788
Query: 627 QPTEKLPPYALPTH 640
P +LP + TH
Sbjct: 789 APGLQLPEHPALTH 802
>gi|158320926|ref|YP_001513433.1| DNA-cytosine methyltransferase [Alkaliphilus oremlandii OhILAs]
gi|158141125|gb|ABW19437.1| DNA-cytosine methyltransferase [Alkaliphilus oremlandii OhILAs]
Length = 423
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 118/288 (40%), Gaps = 69/288 (23%)
Query: 339 VKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAED 398
+ LDL++G G +S G AG V +D N AC++LK ++ D
Sbjct: 4 INFLDLFAGAGGLSEGFLR----AGFEPVAHIELDAN--ACKTLKTRSIYHYLKKN---D 54
Query: 399 FLTLLREWEKLCISFSLIARKDPQQQLYSFNDDGESEEDDDNGNVEDESEDDSEIFEVEK 458
L L R ++K ++N +SE+ D +EK
Sbjct: 55 MLDLYRTYQK------------------TYN---KSEDVKDKA--------------IEK 79
Query: 459 ILKICYGDPKEIKKRGLYLKVRWRNYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILP 518
+L +Y P +D EP+ + EK ++ ++
Sbjct: 80 LL----------------------SYIP-KDQLEPVMNIE-ISEKTLPYIFQEIDCRLKH 115
Query: 519 LPGD-VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVV 577
+ + +D+I GGPPCQ S R R+++N D +N +++ ++ KPK + ENV
Sbjct: 116 MEHEGIDLIIGGPPCQAYSLVGRARDENNMEDDPRNYLYKLYIRFLNKYKPKAFIFENVP 175
Query: 578 DIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWG 625
I+ KG L R A + ++ Y ++ M A +G+ Q R RV + G
Sbjct: 176 GILTAFKGNLFRNLQAYMRRVGYNIQARKMDAKDFGVLQSRKRVIIIG 223
>gi|226223282|ref|YP_002757389.1| type II DNA modification enzyme (methyltransferase) [Listeria
monocytogenes serotype 4b str. CLIP 80459]
gi|406703438|ref|YP_006753792.1| C-5 cytosine-specific DNA methylase [Listeria monocytogenes L312]
gi|225875744|emb|CAS04447.1| Putative type II DNA modification enzyme (methyltransferase)
[Listeria monocytogenes serotype 4b str. CLIP 80459]
gi|406360468|emb|CBY66741.1| C-5 cytosine-specific DNA methylase [Listeria monocytogenes L312]
Length = 389
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 88/204 (43%), Gaps = 56/204 (27%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
++D++ GGPPCQ S R + DEK + ++ FL+PK L ENV ++
Sbjct: 80 NIDLVIGGPPCQSFSTVGRRQ------YDEKATMYKEYRRMLSFLQPKVFLFENVTGLLT 133
Query: 582 FAKGLLGRYALARL-----------IQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTE 630
K G L + I + Y++R ++ A +G+PQ R RVFL G +
Sbjct: 134 -MKNDEGEPVLEDIRKEFGDFSDFEIDLTYEIRETVLNAKHFGVPQNRERVFLLGIR--- 189
Query: 631 KLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLL-------LQDAISDLPSV 683
D+ ++ Q E +LL L+DAI DLP++
Sbjct: 190 ---------KDLEIK-----------------QNWEFPERLLFEDDFLTLEDAIGDLPAL 223
Query: 684 DNYESRDEIPYDREPETEFQCFIR 707
N E +D YD +P T +Q +R
Sbjct: 224 RNGERKD--AYDGDPYTPYQNLMR 245
>gi|242237482|ref|YP_002985663.1| DNA-cytosine methyltransferase [Dickeya dadantii Ech703]
gi|242129539|gb|ACS83841.1| DNA-cytosine methyltransferase [Dickeya dadantii Ech703]
Length = 465
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 62/140 (44%), Gaps = 26/140 (18%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
D+D++ GGPPCQ S K DE+ + ++D+V LKPK+ ++ENV I+
Sbjct: 144 DIDLVMGGPPCQAFST----AGKRKSFKDERGNVFLKYIDLVLELKPKYFIIENVRGILS 199
Query: 582 FA---------------------KGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMR 620
A KG + L++L Y + A +G PQ R R
Sbjct: 200 AALNHRPLAERGDNFPVLENDEIKGGALNFILSKLKISGYAYSFNLYNAANFGTPQIRER 259
Query: 621 VFLWGAQPTEKLPPYALPTH 640
V + ++ K PPY PTH
Sbjct: 260 VIIICSR-NGKTPPYLTPTH 278
>gi|387812928|ref|YP_005428405.1| DNA-cytosine methyltransferase [Marinobacter hydrocarbonoclasticus
ATCC 49840]
gi|381337935|emb|CCG93982.1| Site-specific DNA-methyltransferase [Marinobacter
hydrocarbonoclasticus ATCC 49840]
Length = 395
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 66/126 (52%), Gaps = 12/126 (9%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
DV + GGPPCQ S R + ++ DE+ + F+ +VD ++P+F +MENV +
Sbjct: 92 DVFAVVGGPPCQAYSTAGRRKGEE----DERGQLYQQFVHVVDTIRPRFFVMENVKGLAS 147
Query: 582 FA--KGLLGRYALARLI-----QMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPP 634
KG + AL ++I + Y G++ A YG PQFR R+ + G++ E +
Sbjct: 148 MFVDKGTEHQRALLQVILEKFKALGYHTVHGVLDAVHYGTPQFRERLVIIGSRDNEGI-Y 206
Query: 635 YALPTH 640
+PTH
Sbjct: 207 IPMPTH 212
>gi|315917412|ref|ZP_07913652.1| cytosine specific DNA methyltransferase [Fusobacterium
gonidiaformans ATCC 25563]
gi|313691287|gb|EFS28122.1| cytosine specific DNA methyltransferase [Fusobacterium
gonidiaformans ATCC 25563]
Length = 358
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 90/196 (45%), Gaps = 32/196 (16%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+DV+ GGPPCQG S + R +D D++N + + + +KP+ V++ENV ++
Sbjct: 80 LDVLVGGPPCQGFSLAGK-REED----DKRNMLYKAMVKLAERMKPRAVVLENVPGMLTL 134
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
G + ++ Y++ + ++ A YG+PQ R R F G +++ + P
Sbjct: 135 YDGAGKKRIFNDFEKLGYKMSVKVLYAPEYGVPQIRKRAFFVGLLNSKE--GFTFPE--- 189
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
P N V +DAI DLPS++ + Y+ P+T++
Sbjct: 190 ------PILSSENFVT--------------CEDAIGDLPSLEGIYGDEIQEYECSPQTKY 229
Query: 703 QCFIRLRKDGKKLWFN 718
Q +RK+ KL+ N
Sbjct: 230 QA--EMRKNSTKLYNN 243
>gi|320031459|gb|EFW13422.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
Length = 1040
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 67/134 (50%), Gaps = 9/134 (6%)
Query: 511 GFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKF 570
G S ++ G V+ I G PCQG S N K N ++ + + VDF +P++
Sbjct: 597 GQGSDLVAKLGQVEFISAGSPCQGYSLANS--RKGNKVSLRNSSMIASVAAYVDFYRPQY 654
Query: 571 VLMENVVDIVKFAKGLLGRYALARLI----QMNYQVRMGMMAAGAYGLPQFRMRVFLWGA 626
++ENV + A R L++LI + YQ+R+ + A +YG PQ R R+FL A
Sbjct: 655 AILENVPAM---ASKTHERNPLSQLICAFVGLGYQLRLMHLDAWSYGAPQSRSRLFLLIA 711
Query: 627 QPTEKLPPYALPTH 640
P +LP + TH
Sbjct: 712 APGLQLPEHPALTH 725
>gi|255020360|ref|ZP_05292428.1| DNA-cytosine methyltransferase [Acidithiobacillus caldus ATCC
51756]
gi|254970280|gb|EET27774.1| DNA-cytosine methyltransferase [Acidithiobacillus caldus ATCC
51756]
gi|408385480|gb|AFU62910.1| site specific DNA modification methylase Dcm [Acidithiobacillus
phage AcaML1]
Length = 449
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 20/169 (11%)
Query: 519 LPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVD 578
L G V +I GGPPCQG S R +D ADE+N + +D+V+ ++P+ VL+ENV
Sbjct: 90 LRGAVTMIAGGPPCQGFSVGGR---RDG--ADERNSLVYQMLDMVELVRPRVVLIENVEG 144
Query: 579 IVKF-------AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEK 631
I + A + + RL + Y ++ A +G+PQ R RV + G Q
Sbjct: 145 IARRFVARPGEASTSVAESVIERLSDLGYTSIFDVLDASLFGVPQSRRRVVIVGIQDC-- 202
Query: 632 LPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDL 680
P L+ ++ VA + + + ++AI+DL
Sbjct: 203 ------PMSPADLKATFNEMLSKSAVAVRQHWGLHQTKNVTAKEAIADL 245
>gi|168821212|ref|ZP_02833212.1| modification methylase HaeIII [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|409247997|ref|YP_006888689.1| C-5 cytosine-specific DNA methylase family protein [Salmonella
enterica subsp. enterica serovar Weltevreden str.
2007-60-3289-1]
gi|205342142|gb|EDZ28906.1| modification methylase HaeIII [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|320088731|emb|CBY98489.1| C-5 cytosine-specific DNA methylase family protein [Salmonella
enterica subsp. enterica serovar Weltevreden str.
2007-60-3289-1]
Length = 361
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 57/120 (47%), Gaps = 5/120 (4%)
Query: 508 VTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLK 567
+ HG S+I P DVD++ GG PCQ S P D++ F+ +++ +
Sbjct: 58 IRHGDISQIQSFP-DVDIVVGGYPCQSFS----MAGNRKPNNDDRTNLYKHFLRVLETIH 112
Query: 568 PKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQ 627
PK+ + ENV + G L YQV M+ A AYG+PQ R R+F+ G +
Sbjct: 113 PKYFVAENVSGLKHLGAGSFLEQQLTAYKAAGYQVSYHMVNARAYGVPQSRKRLFIIGVR 172
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 52/97 (53%), Gaps = 14/97 (14%)
Query: 331 VGEPQKMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETE 390
V E + ++++L L+SGCG M G+ AG ++V +A D+ E AC++L P+T+
Sbjct: 4 VFERENDNIRVLSLFSGCGGMDFGIT----SAGGDIV--FANDVVENACKTLGNYFPDTD 57
Query: 391 VRN------ESAEDFLTLLREWEKLCISFSLIARKDP 421
+R+ +S D ++ + C SFS+ + P
Sbjct: 58 IRHGDISQIQSFPDVDIVVGGYP--CQSFSMAGNRKP 92
>gi|427727460|ref|YP_007073697.1| DNA-methyltransferase Dcm [Nostoc sp. PCC 7524]
gi|427363379|gb|AFY46100.1| DNA-methyltransferase Dcm [Nostoc sp. PCC 7524]
Length = 428
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 78/167 (46%), Gaps = 19/167 (11%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
++D + G PCQG S + R D+P +N + F +V L+PKF +MENV I
Sbjct: 86 EIDAVICGSPCQGFSLMGK-RVFDDP----RNSLVFHFHRLVLELQPKFFVMENVRGITV 140
Query: 582 FAKGLLGRYALARLIQMNYQV--RMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPT 639
+ + +A + YQV ++ A YG+PQ R R+FL GA+ KLP Y P
Sbjct: 141 GEHKQILQTLIAEFKAIGYQVEENYKILNAAKYGVPQARERLFLLGARQDVKLPKYPQPI 200
Query: 640 HDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNY 686
P + ++ Q ++L + AI DLP ++Y
Sbjct: 201 TQ-------PAQPHKSGC-----QNSDLPVCPTVWQAIGDLPEAEHY 235
>gi|48243617|gb|AAT40769.1| putative DNA methylase [Haemophilus influenzae]
Length = 293
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 78/172 (45%), Gaps = 23/172 (13%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
+ DV+ GG PCQG S N R++ DE+N + ++ I+ +PK + ENV I+
Sbjct: 65 NADVMIGGFPCQGFSMANTKRHE----LDERNSLYLEYVRILKAKQPKVFVAENVKGILS 120
Query: 582 FAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHD 641
KG + + + Y V ++ A YG+PQ R RV + G
Sbjct: 121 LGKGEIIKAIIQDFSDAGYSVEYKLLNAADYGVPQTRQRVIIVG---------------- 164
Query: 642 VVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIP 693
+R + +FE + + L R + +++AIS LP D E+ D +P
Sbjct: 165 --IRKDLDIQFEFPKQTHSKNGNDGLKRWVSIKEAISHLPDPDG-ENADSVP 213
>gi|399025008|ref|ZP_10727026.1| DNA-methyltransferase Dcm [Chryseobacterium sp. CF314]
gi|398079109|gb|EJL69981.1| DNA-methyltransferase Dcm [Chryseobacterium sp. CF314]
Length = 413
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 106/222 (47%), Gaps = 26/222 (11%)
Query: 497 LSNCGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQL 556
L+ I E V S + L G +++I GGPPCQG S R RN+ +DE+N+ +
Sbjct: 65 LTKSAHDINE-VIKNHSSDLKNLRGQINLIAGGPPCQGFSMAGR-RNE----SDERNELI 118
Query: 557 IVFMDIVDFLKPKFVLMENVVDI-VKFAKGLLGRYALARLI-----QMNYQVRMGMMAAG 610
++ VD ++P + ENV ++F K A + L+ + Y V+ ++
Sbjct: 119 KSYIQFVDLVQPDLIFFENVRGFTMEFKKNKEKGIAYSELVLKSLRDLGYYVQGKLVNFS 178
Query: 611 AYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARK 670
YG+PQ R R L G + ++ + ++V +E E+N ++ + ++ +
Sbjct: 179 EYGVPQKRTRFILIGIKCSKN-----NASQEMV--NSFFSELEKNKYSFLKSKKLKFINT 231
Query: 671 LLLQDAISDLPSVDNY-ESRDEIPYDR----EPETEFQCFIR 707
++DAISDL + ES D Y +P +++Q ++R
Sbjct: 232 --VEDAISDLVQSNGIVESIDSSGYKSSKYGQPVSKYQKYLR 271
>gi|419808401|ref|ZP_14333305.1| Type II restriction modification system C5-cytosine and N4-cytosine
or N6-adenine DNAmethyltransferase [Mycoplasma
agalactiae 14628]
gi|390605804|gb|EIN15177.1| Type II restriction modification system C5-cytosine and N4-cytosine
or N6-adenine DNAmethyltransferase [Mycoplasma
agalactiae 14628]
Length = 593
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 86/186 (46%), Gaps = 36/186 (19%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+++I GGPPCQG S + K L D +N + ++DIV+ + P+ ++ENV ++
Sbjct: 74 INMIIGGPPCQGFSN----KGKKKGLDDPRNFLFLEYLDIVEKVSPELFIIENVKTMLTA 129
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMR-VFLWGAQPTEKLPPYALPTHD 641
KG + ++ M Y++ G++ A +G+PQ R R + + + LPP
Sbjct: 130 VKGYFIDQIVKKIELMGYKISYGVLNAKDFGIPQSRPRAIIIAHKEMAVPLPP------- 182
Query: 642 VVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETE 701
N ++ + ++DAISDL +++ + E Y ++E
Sbjct: 183 ------------PNGIS------------VTVRDAISDLAYLNSADGDYESQYINNAQSE 218
Query: 702 FQCFIR 707
+Q +R
Sbjct: 219 YQKLMR 224
>gi|374709818|ref|ZP_09714252.1| site-specific DNA-methyltransferase [Sporolactobacillus inulinus
CASD]
Length = 466
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 67/135 (49%), Gaps = 16/135 (11%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP+ +D+I GGP CQ +S K AD + + I ++D+++ ++PK+ ++ENV
Sbjct: 137 LPMGYPIDIIIGGPNCQPMST----AGKRKGFADIRGEAFIRYIDVIEEIRPKYFILENV 192
Query: 577 VDIV-----------KFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWG 625
++ K KG + Y L R +M Y V + A +G PQ R RV +
Sbjct: 193 RGLLSVEAIFDDTNDKPVKGGVLHYTLNRFEKMGYAVSFQLYNAANFGAPQGRERV-ILL 251
Query: 626 AQPTEKLPPYALPTH 640
+ +K PY PTH
Sbjct: 252 GKLGKKKLPYLTPTH 266
>gi|378732261|gb|EHY58720.1| DNA (cytosine-5-)-methyltransferase [Exophiala dermatitidis
NIH/UT8656]
Length = 1254
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 67/144 (46%), Gaps = 9/144 (6%)
Query: 508 VTHGFKSKIL---PLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFM-DIV 563
V GF+ L P+P D+D I GG PC S N F++ +K+ L+ M +
Sbjct: 682 VEDGFEDFALGRKPMP-DIDFIIGGFPCPFYSTLNHFKHTRR---SQKDGSLVANMLSWI 737
Query: 564 DFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFL 623
+ P +VLMENV ++ + R A+ L+ + YQVR + G R R+F+
Sbjct: 738 EIFMPPYVLMENVPNMDRIRPNAC-RQAICHLVALGYQVRKSVHNDANLGGVSIRQRLFI 796
Query: 624 WGAQPTEKLPPYALPTHDVVLRGV 647
A P LP + TH LR +
Sbjct: 797 VAAAPGVMLPDKLVDTHGTGLRKI 820
>gi|427738987|ref|YP_007058531.1| DNA-methyltransferase Dcm [Rivularia sp. PCC 7116]
gi|427374028|gb|AFY57984.1| DNA-methyltransferase Dcm [Rivularia sp. PCC 7116]
Length = 429
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 78/171 (45%), Gaps = 25/171 (14%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
++DV+ GG PCQG S + L D +N + F+ ++ L+PK+ + ENV +
Sbjct: 72 EIDVVFGGSPCQGFSMMGK-----RALDDPRNSLVFHFLRLILELQPKYFVFENVPGLTV 126
Query: 582 FAKGLLGRYALARL------IQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPY 635
+ +A ++ NYQV + A YG+PQ R R+F++G + LP Y
Sbjct: 127 GEHRIFLSTVIAEFEKNGYRVEANYQV----LNAANYGVPQDRARLFIFGCRQGLNLPKY 182
Query: 636 ALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNY 686
P P +++ + +L + DAI DLP V+NY
Sbjct: 183 PQPL-------TAPKISKKSKYIVN---NPDLPATPTVWDAICDLPEVENY 223
>gi|417993543|ref|ZP_12633890.1| C-5 cytosine-specific DNA methylase [Lactobacillus casei CRF28]
gi|410531479|gb|EKQ06205.1| C-5 cytosine-specific DNA methylase [Lactobacillus casei CRF28]
Length = 311
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 62/119 (52%), Gaps = 4/119 (3%)
Query: 521 GDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIV 580
G VD++ G PPCQG + NR NK +D++N + ++ V +KP F++MENV I+
Sbjct: 66 GHVDIVAGCPPCQGFTQMNR-NNKRRAYSDKRNILIEEYLRAVKIIKPNFIMMENVPQII 124
Query: 581 KFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPT 639
+ + L L ++ Y + + +G+PQ R R+ L GA + P+ + T
Sbjct: 125 YYDR---FNSMLEELKEIGYSIDFKEINVKDFGIPQSRRRLVLIGALSHDVDFPFRMNT 180
>gi|152994008|ref|YP_001359729.1| cytosine-specific methyltransferase [Sulfurovum sp. NBC37-1]
gi|151425869|dbj|BAF73372.1| cytosine-specific methyltransferase [Sulfurovum sp. NBC37-1]
Length = 362
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 75/173 (43%), Gaps = 30/173 (17%)
Query: 525 VICGGPPCQGVSGFN-RFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFA 583
++ GGPPCQG S N + RN DNP N + V+ LKP + + ENVV F
Sbjct: 71 LLFGGPPCQGFSVANTKTRNLDNP----NNWMFREYCRFVEDLKPDWFVFENVVGFKSFD 126
Query: 584 KGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVV 643
KG L + Y+ ++ A +G+PQ+R R F+ G +
Sbjct: 127 KGRFAVEVEKELKSLGYKTNSSVLNAADFGVPQYRNRFFIIGHRKE-------------- 172
Query: 644 LRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDR 696
+G I +F+ E K+ + +A+ DLPS+ N + E Y R
Sbjct: 173 -KGGIKFDFD----------SLEKKPKVTVGEALKDLPSLKNGDKIKEAAYKR 214
>gi|409422062|ref|ZP_11259177.1| modification methylase XorII [Pseudomonas sp. HYS]
Length = 428
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 84/175 (48%), Gaps = 49/175 (28%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
D+DV+ GG PCQG S + L D +N+ + ++ IV LKPK+ + ENV
Sbjct: 80 DIDVVFGGAPCQGFSMIGK-----RALDDSRNQLVFHYVRIVAELKPKYCVFENV----- 129
Query: 582 FAKGL-LGRYA------LARLIQMNYQVRMG--MMAAGAYGLPQFRMRVFLWGAQPTEKL 632
KGL LG++A +A L + Y V + ++ A YG+PQ R R+FL G +
Sbjct: 130 --KGLTLGKHAEFLKELIAALGEAGYDVTLPYRVLNAADYGVPQDRKRLFLIGTR----- 182
Query: 633 PPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYE 687
RG+ NT Y E Q +++ + +AISDLP + +E
Sbjct: 183 ------------RGL-------NTPEYPEPQ----LKRVNVGEAISDLPDANTFE 214
>gi|384512754|ref|YP_005707847.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis OG1RF]
gi|430359983|ref|ZP_19426027.1| C-5 cytosine-specific DNA methylase [Enterococcus faecalis OG1X]
gi|430371445|ref|ZP_19429388.1| C-5 cytosine-specific DNA methylase [Enterococcus faecalis M7]
gi|327534643|gb|AEA93477.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis OG1RF]
gi|429513123|gb|ELA02715.1| C-5 cytosine-specific DNA methylase [Enterococcus faecalis OG1X]
gi|429515101|gb|ELA04628.1| C-5 cytosine-specific DNA methylase [Enterococcus faecalis M7]
Length = 334
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 15/150 (10%)
Query: 521 GDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIV 580
G D++CGG PCQ S K AD + L+P+F+ +ENV ++
Sbjct: 65 GHTDILCGGFPCQAFS----IAGKRQGFADTRGTLFFEIARFTAILRPRFLFLENVKGLL 120
Query: 581 KFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLP------- 633
+G L L ++ Y V + + AY +PQ R RVF+ G E+ P
Sbjct: 121 NHERGATFETILRTLDELGYDVEWACLNSKAY-VPQNRERVFIIGHSRAERTPQIFPLTR 179
Query: 634 ---PYALPTHDVVLRGVIPTEFERNTVAYD 660
P P +++ G +P ++++++ +
Sbjct: 180 EDKPVIYPKKGIIVVGKLPEKYQQSSRVFS 209
>gi|338812669|ref|ZP_08624837.1| BsaWI methylase [Acetonema longum DSM 6540]
gi|337275331|gb|EGO63800.1| BsaWI methylase [Acetonema longum DSM 6540]
Length = 414
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 64/124 (51%), Gaps = 14/124 (11%)
Query: 512 FKSKILPLPGDVDVICGGPPCQGVS-GFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKF 570
+ +L L G +D++CGGPPCQG S G R N D +N I +++ V +KP+
Sbjct: 78 LRRHLLDLQGKIDIVCGGPPCQGFSVGGMRDGN------DSRNNLPIKYLEFVSLVKPRV 131
Query: 571 VLMENVVDIVK-------FAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFL 623
++ ENV + + KG + + +L ++ Y ++ A +G+PQ R R+ +
Sbjct: 132 IIFENVDGMARPFLSKPSSFKGAFLDWLVNKLGELGYVAAYKIIDASKFGVPQIRKRLII 191
Query: 624 WGAQ 627
+G Q
Sbjct: 192 FGVQ 195
>gi|427720675|ref|YP_007068669.1| DNA-cytosine methyltransferase [Calothrix sp. PCC 7507]
gi|427353111|gb|AFY35835.1| DNA-cytosine methyltransferase [Calothrix sp. PCC 7507]
Length = 657
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 56/118 (47%), Gaps = 2/118 (1%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
VD + GGPPCQ S R D + ++ I+ L+PK L ENV I
Sbjct: 122 VDFVIGGPPCQTFSAAGRRAAGVLGTTDARGTLFQEYVRILKILQPKGFLFENVYGITGA 181
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTH 640
G + A ++ Y++ ++ A YG+PQ R R+F+ G + E L PY PTH
Sbjct: 182 NGGEAWQEIQAAFQEVGYKIYFRILDAADYGVPQHRERLFIVGLKEGEYLFPY--PTH 237
>gi|433772302|ref|YP_007302769.1| DNA-methyltransferase Dcm [Mesorhizobium australicum WSM2073]
gi|433664317|gb|AGB43393.1| DNA-methyltransferase Dcm [Mesorhizobium australicum WSM2073]
Length = 455
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 67/140 (47%), Gaps = 28/140 (20%)
Query: 509 THGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKP 568
THG K+ L G +D++ GGPPCQG S R R D +N+ + +++ V+ + P
Sbjct: 109 THG--DKLSALRGQIDLLAGGPPCQGFSSAGRRRQ-----GDPRNELVERYLEFVEIVLP 161
Query: 569 KFVLMENVVDIV-------------KFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLP 615
+ VL+ENV I FA+ L+ R + +Y V + YG+P
Sbjct: 162 RMVLIENVRGITYDFIDDNENVPPRNFAEELIAR------LGRHYHVYKDTVRCSEYGVP 215
Query: 616 QFRMRVFLWGAQPTE--KLP 633
Q R R FL G TE KLP
Sbjct: 216 QQRPRFFLVGMLKTEMRKLP 235
>gi|209528195|ref|ZP_03276665.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328]
gi|209491380|gb|EDZ91765.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328]
Length = 315
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 65/125 (52%), Gaps = 9/125 (7%)
Query: 500 CGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVF 559
CG+ + +F H + SKI V ++ GGPPCQG S K +P D +N F
Sbjct: 107 CGD-VNDFNPHQWLSKIGS--PSVHLVVGGPPCQGFS----VAGKRDP-NDPRNHLFQQF 158
Query: 560 MDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNY-QVRMGMMAAGAYGLPQFR 618
+ IV ++P +V+MENV I+ KG + + + + Y + + ++A+ AYG+PQ R
Sbjct: 159 IRIVAEVRPWYVVMENVPGILTLKKGKIKQAIFSAFQAIGYTNISVAILASAAYGVPQIR 218
Query: 619 MRVFL 623
R
Sbjct: 219 PRAIF 223
>gi|145638078|ref|ZP_01793692.1| putative type II 5-cytosoine methyltransferase [Haemophilus
influenzae PittHH]
gi|145268726|gb|EDK08715.1| putative type II 5-cytosoine methyltransferase [Haemophilus
influenzae PittHH]
Length = 226
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 78/172 (45%), Gaps = 23/172 (13%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
+ DV+ GG PCQG S N R++ DE+N + ++ I+ +PK + ENV I+
Sbjct: 66 NADVMIGGFPCQGFSMANTKRHE----LDERNSLYLEYVRILKAKQPKVFVAENVKGILS 121
Query: 582 FAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHD 641
KG + + + Y V ++ A YG+PQ R RV + G
Sbjct: 122 LGKGEIIKAIIQDFSDAGYSVEYKLLNAADYGVPQTRQRVIIVG---------------- 165
Query: 642 VVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIP 693
+R + +FE + + L R + +++AIS LP D E+ D +P
Sbjct: 166 --IRKDLDIQFEFPKQTHSKNGNDGLKRWVSIKEAISHLPDPDG-ENADSVP 214
>gi|308184264|ref|YP_003928397.1| type II DNA modification enzyme [Helicobacter pylori SJM180]
gi|308060184|gb|ADO02080.1| type II DNA modification enzyme [Helicobacter pylori SJM180]
Length = 188
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 56/109 (51%), Gaps = 6/109 (5%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ ++D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFVFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEK 631
KG L + L + Y + ++ A YG PQ R RVFL GA + K
Sbjct: 121 QKGQLFQRICNALKERGYILEHAILNALDYGAPQVRERVFLVGALKSFK 169
>gi|295110825|emb|CBL24778.1| DNA-methyltransferase (dcm) [Ruminococcus obeum A2-162]
Length = 311
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 57/112 (50%), Gaps = 5/112 (4%)
Query: 516 ILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMEN 575
I LP + DV+ GG PCQG S NR R L DE+N+ F + +PKF + EN
Sbjct: 56 IYDLP-EADVVVGGFPCQGFSLANRKRT----LEDERNQLYKFFYSTIKIKQPKFFIAEN 110
Query: 576 VVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQ 627
V I+ KG + + ++ + Y + ++ YG+PQ R RV + G +
Sbjct: 111 VRGILSLGKGEVIKQIVSDFEEAGYITTVNLVNMANYGVPQTRQRVLIIGQR 162
>gi|227112465|ref|ZP_03826121.1| putative C-5 cytosine-specific DNA methylase [Pectobacterium
carotovorum subsp. brasiliensis PBR1692]
Length = 390
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 71/137 (51%), Gaps = 15/137 (10%)
Query: 521 GDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIV 580
G++D+I GGPPCQ GF+ R K+ + D +N L+ + + V +PK L+ENV ++
Sbjct: 80 GELDIILGGPPCQ---GFSTHRIKNAGVDDPRNALLLKYFEFVHEFQPKAFLVENVTGLL 136
Query: 581 --KFAKGLLGRYALARLIQMNYQVRMG-MMAAGAYGLPQFRMRVFLWGAQ-----PTEKL 632
+ K LA+ +Y ++ ++ A YG+PQ R RVF++G T K
Sbjct: 137 WKRHEKYFHQFIDLAQ--NSHYTLKFSNIINAVDYGVPQNRKRVFIFGIHEDLNNSTIKF 194
Query: 633 PPYALPTHDVVLRGVIP 649
PP PTH GV P
Sbjct: 195 PPK--PTHHSPNSGVEP 209
>gi|406700893|gb|EKD04053.1| cytosine-specific methyltransferase [Trichosporon asahii var.
asahii CBS 8904]
Length = 513
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 61/129 (47%), Gaps = 18/129 (13%)
Query: 521 GDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIV 580
G+V ++ GPPCQ + N R D + + + ++ P+ VL+ENV I
Sbjct: 291 GEVSLLVAGPPCQAFTRANHNRK-----VDARGHEPARLLRLISQTLPQLVLIENVPGI- 344
Query: 581 KFAKGLLGRYALA---------RLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEK 631
K G +A L+ + YQVR ++ A +YG PQ+R R+F+ GA
Sbjct: 345 ---KDRCGSDDVAWNAAEDVVRSLLGLGYQVRWAVLDAASYGAPQYRKRLFVLGAMTGTP 401
Query: 632 LPPYALPTH 640
LP + PTH
Sbjct: 402 LPRFPEPTH 410
>gi|334346028|ref|YP_004554580.1| DNA-cytosine methyltransferase [Sphingobium chlorophenolicum L-1]
gi|334102650|gb|AEG50074.1| DNA-cytosine methyltransferase [Sphingobium chlorophenolicum L-1]
Length = 418
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 87/191 (45%), Gaps = 25/191 (13%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
D+D++ GGPPCQG F++ +D L D++N F ++ +KP+ LMENV +++
Sbjct: 70 DLDLVFGGPPCQG---FSQIGPRD--LLDDRNVLYREFARVIRKIKPRMFLMENVPNLLL 124
Query: 582 FAKGLLGRYALARLIQMNYQVRMGM-MAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTH 640
KG +A ++ Y + ++A +G+PQ R RVF +G + K P
Sbjct: 125 MQKGHFRDAIMAHFSELGYSNTTYLKVSAADFGVPQTRERVFFFGTRDDIKFP------- 177
Query: 641 DVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPET 700
FE A + ++ + + + AI DLP+ + S + Y P+
Sbjct: 178 -----------FELQAFAEAFLKGLKVKQPVTVWQAIGDLPA-NVVHSGETAAYPTLPKG 225
Query: 701 EFQCFIRLRKD 711
Q +R D
Sbjct: 226 ATQFLKAMRLD 236
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 6/62 (9%)
Query: 339 VKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAED 398
+K + L++GCG G C GA LAG + AV+ ++YAC + + N P+T + D
Sbjct: 1 MKAVSLFAGCG----GFCEGAELAGFEITV--AVEWDKYACMTYRENFPKTPLFEGDIHD 54
Query: 399 FL 400
FL
Sbjct: 55 FL 56
>gi|425432238|ref|ZP_18812810.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori GAM100Ai]
gi|410715217|gb|EKQ72642.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori GAM100Ai]
Length = 213
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 77/180 (42%), Gaps = 33/180 (18%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ ++D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFIFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
KG L + + Y + ++ A YG+PQ R RV L GA + + Y
Sbjct: 121 QKGQLFQRICNAFKERGYILEHAILNALDYGVPQIRERVILVGALKSFEQKFY------- 173
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
I T F L+DA+ DLP + + E+ D + Y + + F
Sbjct: 174 -FPKPIKTHFS-------------------LKDALGDLPPIQSGENGDALGYLKNADNVF 213
>gi|420489567|ref|ZP_14988159.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-11]
gi|420523508|ref|ZP_15021926.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-11b]
gi|393104988|gb|EJC05539.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-11]
gi|393125857|gb|EJC26309.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-11b]
Length = 368
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 59/117 (50%), Gaps = 4/117 (3%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
VD++ GG PCQ F+ NK L D + ++ +++ +KPK + ENV +++
Sbjct: 107 VDILVGGSPCQS---FSSIGNKLG-LEDTRGTLFYDYIRVLNEIKPKVFIFENVYGMLRH 162
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPT 639
KG ++Y + G++ A YG+PQ R R+FL G Q EK + P+
Sbjct: 163 DKGKTFEIIQKAFESLDYHYKYGILDARNYGIPQGRRRLFLVGFQEQEKCANFTFPS 219
>gi|326381717|ref|ZP_08203411.1| cytosine-specific methyltransferase [Gordonia neofelifaecis NRRL
B-59395]
gi|326199964|gb|EGD57144.1| cytosine-specific methyltransferase [Gordonia neofelifaecis NRRL
B-59395]
Length = 356
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 89/194 (45%), Gaps = 38/194 (19%)
Query: 519 LPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVD 578
LP D + GGPPCQG S + RN+++P +N + F IV L+PK ++ENV+
Sbjct: 72 LPEKPDWVVGGPPCQGYSTVGK-RNREDP----RNVLFLQFRRIVKGLRPKGFMIENVLG 126
Query: 579 IVKFAKGLLGRYALARLIQ-MNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYAL 637
+ K + +A + + Y+VR ++ + +G+PQ R RV G +
Sbjct: 127 L----KDMSYEQEVAESFKDLGYRVRFMVLTSAEHGVPQLRRRVVFVGHRD--------- 173
Query: 638 PTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDRE 697
RG+ F+ + +D+ +A DAI DLP + E+ E Y +
Sbjct: 174 -------RGL----FQGPPITHDDETYVSVA------DAIFDLPELSAGEAATE--YTKP 214
Query: 698 PETEFQCFIRLRKD 711
P T +Q + L D
Sbjct: 215 PSTPYQKLMHLPGD 228
>gi|434387116|ref|YP_007097727.1| DNA-methyltransferase Dcm [Chamaesiphon minutus PCC 6605]
gi|428018106|gb|AFY94200.1| DNA-methyltransferase Dcm [Chamaesiphon minutus PCC 6605]
Length = 426
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 80/169 (47%), Gaps = 31/169 (18%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
D+DV+ GG PCQG S + D +N+ + ++ +V L PK+ + ENV
Sbjct: 73 DIDVVFGGAPCQGFSLMGK-----RVFEDPRNQLVFHYVRLVRELNPKYCVFENV----- 122
Query: 582 FAKGL-LGRYA------LARLIQMNYQVRM--GMMAAGAYGLPQFRMRVFLWGAQPTEKL 632
KGL LG++A + L Y V ++ A YG+PQ R R+FL GA+ KL
Sbjct: 123 --KGLTLGKHAQFLDELITALGDAGYTVLTPYKVLNAADYGVPQDRRRLFLIGARKDMKL 180
Query: 633 PPYALPTHDVVLR----GVIPTE------FERNTVAYDEGQQAELARKL 671
P Y P D V G +P + +T++Y ++ ARKL
Sbjct: 181 PEYPKPNQDRVTVLEAIGDLPDADRFDDLWGTDTISYQWETKSTYARKL 229
>gi|424912865|ref|ZP_18336239.1| DNA-methyltransferase Dcm [Rhizobium leguminosarum bv. viciae USDA
2370]
gi|392844022|gb|EJA96545.1| DNA-methyltransferase Dcm [Rhizobium leguminosarum bv. viciae USDA
2370]
Length = 408
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 63/124 (50%), Gaps = 14/124 (11%)
Query: 507 FVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFL 566
HG S ++ L G +D+I GGPPCQG S F + NP D +NK +++IV +
Sbjct: 70 LANHG--SFLVGLRGSIDLIAGGPPCQGFS----FAGRRNP-NDPRNKLTEEYIEIVSLV 122
Query: 567 KPKFVLMENVVDIVKFAKGLLGRYAL-------ARLIQMNYQVRMGMMAAGAYGLPQFRM 619
P+F+L+ENV K + A+ RL + Y+V M+ A +G+PQ R
Sbjct: 123 MPQFLLLENVRGFTSAFKTSTEQQAIPYSEIVAGRLEDLGYKVFKKMLNASRFGVPQPRP 182
Query: 620 RVFL 623
R +
Sbjct: 183 RFIM 186
>gi|237753192|ref|ZP_04583672.1| cytosine specific DNA methyltransferase [Helicobacter winghamensis
ATCC BAA-430]
gi|229375459|gb|EEO25550.1| cytosine specific DNA methyltransferase [Helicobacter winghamensis
ATCC BAA-430]
Length = 354
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 84/186 (45%), Gaps = 36/186 (19%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
V++I GGPPCQG S + K L D +N + ++DIV L+P+ ++ENV I
Sbjct: 76 VNMIIGGPPCQGFS----LKGKKLGLQDPRNFLFLEYLDIVKQLQPELFIIENVKSIFST 131
Query: 583 AKGLLGRYALARLIQ-MNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHD 641
A G + + R IQ + Y+V ++ A + +PQ R R F A E L P
Sbjct: 132 ANGYF-KNEIERHIQDLGYKVDSAILNAKDFCVPQNRERAFFI-AHKKEYL---GFPA-- 184
Query: 642 VVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETE 701
P+E + + ++DAISDL + + + PY P++
Sbjct: 185 -------PSEMQ-----------------VCVKDAISDLAYLQSNQGEITSPYKNPPQSA 220
Query: 702 FQCFIR 707
+Q +R
Sbjct: 221 YQKMLR 226
>gi|422729221|ref|ZP_16785625.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX0012]
gi|315150308|gb|EFT94324.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX0012]
Length = 334
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 15/150 (10%)
Query: 521 GDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIV 580
G D++CGG PCQ S K AD + L+P+F+ +ENV ++
Sbjct: 65 GHTDILCGGFPCQAFS----IAGKRQGFADTRGTLFFEIARFTAILRPRFLFLENVKGLL 120
Query: 581 KFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLP------- 633
+G L L ++ Y V + + AY +PQ R RVF+ G E+ P
Sbjct: 121 NHERGATFETILRTLDELGYDVEWACLNSKAY-VPQNRERVFIIGHSRAERTPQIFPLTR 179
Query: 634 ---PYALPTHDVVLRGVIPTEFERNTVAYD 660
P P +++ G +P ++++++ +
Sbjct: 180 EDKPVIHPKKGIIVVGKLPEKYQQSSRVFS 209
>gi|194335797|ref|YP_002017591.1| DNA-cytosine methyltransferase [Pelodictyon phaeoclathratiforme
BU-1]
gi|194308274|gb|ACF42974.1| DNA-cytosine methyltransferase [Pelodictyon phaeoclathratiforme
BU-1]
Length = 434
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 75/173 (43%), Gaps = 19/173 (10%)
Query: 524 DVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFA 583
DV+ GGPPCQG S N +NK+ D + + I FMD+V +MENV +++
Sbjct: 103 DVVIGGPPCQGFSLLN--KNKE---GDARKQLWIPFMDVVRLSGADVFVMENVPELL--- 154
Query: 584 KGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWG---AQPTEKLPPYALPTH 640
L R A M +++ + A YG+PQ R R F+ G A P PP
Sbjct: 155 SSLECREIYAMANAMGFKLVSAKLCAADYGVPQIRWRAFIVGCKFADPQAVFPPKKTHFP 214
Query: 641 DVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIP 693
R F +++ Y Q ++DAI DLP+ R E P
Sbjct: 215 HKGYR----QRFVESSIPYIADAQPFRT----VKDAIGDLPAPQGTIVRPEAP 259
>gi|17229768|ref|NP_486316.1| site-specific DNA-methyltransferase [Nostoc sp. PCC 7120]
gi|17131367|dbj|BAB73975.1| site-specific DNA-methyltransferase [Nostoc sp. PCC 7120]
Length = 431
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 81/174 (46%), Gaps = 32/174 (18%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIV- 580
++DVI G PCQG S + R D+P +N + F +V L+PKF +MENV I
Sbjct: 86 EIDVIICGSPCQGFSLMGK-RVFDDP----RNSLVFHFHRLVLELQPKFFVMENVRGITF 140
Query: 581 ----KFAKGLLGRY-ALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPY 635
+ + L+ + + ++ NYQV + A YG+PQ R R+FL GA+ KLP Y
Sbjct: 141 GEHKQILQALIYEFKSHGYQVEENYQV----LNAAHYGVPQARERLFLIGAREDVKLPKY 196
Query: 636 ALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLL---LQDAISDLPSVDNY 686
P + + L+R L + +AI DLP V+ Y
Sbjct: 197 PKPI--------------TKPAKSNNSKARNLSRLPLCPNVWEAIGDLPEVEQY 236
>gi|237703954|ref|ZP_04534435.1| DNA-cytosine methyltransferase [Escherichia sp. 3_2_53FAA]
gi|226901866|gb|EEH88125.1| DNA-cytosine methyltransferase [Escherichia sp. 3_2_53FAA]
Length = 367
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 521 GDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIV 580
G++D+I GGPPCQG F+ R D + D +NK L+ + D V KPK L+ENV ++
Sbjct: 44 GELDMILGGPPCQG---FSSHRINDAGVDDPRNKLLLRYFDFVCEFKPKAFLVENVSGLL 100
Query: 581 -KFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQ 627
K + L R+ + ++ A YG+PQ R RVF+ G +
Sbjct: 101 WKRHEAHLKRFKFLASKNGYTLIHCDVLNARDYGVPQNRKRVFIAGVR 148
>gi|420418415|ref|ZP_14917507.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4076]
gi|393033241|gb|EJB34304.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4076]
Length = 189
Score = 64.3 bits (155), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 6/104 (5%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ ++D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKMFVFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGA 626
KG L + + Y + ++ A YG+PQ R RV L GA
Sbjct: 121 QKGQLFQQICNAFKERGYILEHAILNALDYGVPQIRERVILVGA 164
>gi|189459597|ref|ZP_03008382.1| hypothetical protein BACCOP_00223 [Bacteroides coprocola DSM 17136]
gi|189433679|gb|EDV02664.1| DNA (cytosine-5-)-methyltransferase [Bacteroides coprocola DSM
17136]
Length = 387
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 95/186 (51%), Gaps = 23/186 (12%)
Query: 513 KSKILPLPGD--VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKF 570
K++I+ G+ V+V+ GGPPCQG S + +R+ + D++N+ F+++V+ L+P+F
Sbjct: 198 KARIMEACGNTPVNVVVGGPPCQGFS-YAGWRDPN----DKRNQLFKDFVEMVNRLRPEF 252
Query: 571 VLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGM-MAAGAYGLPQFRMRVFLWGAQPT 629
+MENV I+ KG + + ++ Y+V + + + A +G+PQ R RVF+ G+
Sbjct: 253 FVMENVPGILTMRKGDAIKEIIEAFTEIGYRVNVPIKLNAEEFGVPQRRKRVFIIGSLEE 312
Query: 630 EKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESR 689
+P P+ + V VA + ++DAI LP ++N
Sbjct: 313 ISIPQ---PSPLFYMPSVKTPNMWNLPVA------------ITVRDAIGSLPELENGGGS 357
Query: 690 DEIPYD 695
E+ Y+
Sbjct: 358 LEMDYE 363
>gi|353240447|emb|CCA72316.1| related to cytosine-specific methyltransferase EC=2.1.1.37-Laccaria
bicolor [Piriformospora indica DSM 11827]
Length = 1301
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 79/183 (43%), Gaps = 15/183 (8%)
Query: 513 KSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVL 572
+ + +P P VDVI G PC G S +D A + L+ +P+F +
Sbjct: 905 RKRHMPPPQAVDVILAGLPCSGFS-MQSVYGRDTKEA-QVGLVLVARGTHKASYRPRFFI 962
Query: 573 MENVVDIVKF----------AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVF 622
+ENV ++ + + + L L + Y VR G+ A YG PQ R R+F
Sbjct: 963 IENVARMINYESLDYSTEETISFAIVKIILRTLTALGYSVRWGLFNAVNYGSPQHRSRLF 1022
Query: 623 LWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLL-LQDAISDLP 681
+G++ +LP +PTH V T F+R T+ + A + + AI DLP
Sbjct: 1023 FYGSRGGSRLPEIPIPTH--VASKNSRTRFQRFTLVPTKLMHYLAALPPVNISSAIGDLP 1080
Query: 682 SVD 684
D
Sbjct: 1081 PFD 1083
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 71/162 (43%), Gaps = 16/162 (9%)
Query: 243 IDQRRVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLAIPHCDYYCDMMYLLPYSTF 302
+D+RR++ + D P+E + ++ + R + D ++ + P+ + L T
Sbjct: 722 MDERRLYLVGDEIDIPVENIFRRC-VVRYDPHWDRHSQLESEPNEFFLTHRSTKLMNPTV 780
Query: 303 FSLPPENKR------VSSETSSTISSDVDANECEVGE----PQKMDVKLLDLYSGCGAMS 352
L P N R SE + S + + +GE + LDL+SG G
Sbjct: 781 RDLHPINPRDFPVCEECSERQGKMDSYFNFYKPSLGEGANASTGTQMNTLDLFSGAG--- 837
Query: 353 TGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNE 394
GL LG + G L +WAV+ + A Q+ + N P+ +V +
Sbjct: 838 -GLALGVTMTGA-LAVKWAVEKSIPASQTFRRNFPDAQVYTQ 877
>gi|270293678|ref|ZP_06199880.1| cytosine-specific methyltransferase [Bacteroides sp. D20]
gi|270275145|gb|EFA21005.1| cytosine-specific methyltransferase [Bacteroides sp. D20]
Length = 361
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 80/179 (44%), Gaps = 38/179 (21%)
Query: 522 DVDVICGGPPCQGVSGFNRF-RNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIV 580
+V +I GGPPCQG S N RN DNP N F+ +V +KP++ ++ENV +
Sbjct: 68 EVFIIMGGPPCQGFSMSNTMSRNMDNP----NNLLFKEFVRLVSEIKPRWFVLENVWGMT 123
Query: 581 KFAKGL---LGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYAL 637
K G + ++ I+ Y+V+ ++ A YG+PQ RMR+F+ G
Sbjct: 124 KMNNGETIEMIKHCFEE-IEPGYKVKWKVLWADEYGVPQRRMRMFMVG------------ 170
Query: 638 PTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDR 696
N D K+ +++AI DLP + N + D +PY +
Sbjct: 171 -----------------NNQGIDFEFPKPFDYKVSVEEAIGDLPVLHNGDMIDSLPYTK 212
>gi|51892448|ref|YP_075139.1| site-specific DNA-methyltransferase [Symbiobacterium thermophilum
IAM 14863]
gi|51856137|dbj|BAD40295.1| site-specific DNA-methyltransferase [Symbiobacterium thermophilum
IAM 14863]
Length = 486
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 95/215 (44%), Gaps = 30/215 (13%)
Query: 523 VDVICGGPPCQGVSGFNR------FRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
VD+I GGPPCQ + R +R+ + D + + ++ VD LKP ++MENV
Sbjct: 91 VDIIIGGPPCQAYARVGRAKLREIWRHPEGYKLDPRGDLFLHYLYYVDRLKPVALVMENV 150
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFL------WGAQPTE 630
D + + + + L NY R ++ A YG+PQ R R+FL G +P
Sbjct: 151 PDALNYGGHNIAQEVADWLEDRNYVCRYTLLNAVHYGVPQMRERMFLIAVAGELGVEPEF 210
Query: 631 KLPPYA--LP-----THDVVLRGVIPTEFER-NTVAYDEGQQAELARKLLLQDAISDLPS 682
+P +A LP V +R + + ER + L + +AI DLP
Sbjct: 211 PVPTHAFTLPAGYKNARKVAMRTLGLLQPERLGSFVSPPTVDPALPPAVTAYEAIGDLPP 270
Query: 683 VDNY-ESR---------DEIPYDREPETEFQCFIR 707
+ + E+R +++PY P +++ +R
Sbjct: 271 ITAHLENRIGRGPRRFTEQVPYAGPPHSDYARLMR 305
>gi|289167263|ref|YP_003445530.1| type II DNA modification enzyme (methyltransferase
cytosine-specific) [Streptococcus mitis B6]
gi|288906828|emb|CBJ21662.1| type II DNA modification enzyme (methyltransferase
cytosine-specific) [Streptococcus mitis B6]
Length = 387
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 104/239 (43%), Gaps = 42/239 (17%)
Query: 483 NYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFR 542
N+ +E + G++ E I H KSK + VD++ GGPPCQ S + +
Sbjct: 42 NHDAAEAFRQNYPGVTMIEEDIANIDEHFLKSKGIS-SKRVDLVIGGPPCQSFSTVGKRQ 100
Query: 543 NKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF---AKGLLGRYALARLIQMN 599
D++ K + I+ F++PK + ENV ++ G + R ++
Sbjct: 101 ------YDKRAKMYREYRRILSFIQPKMFVFENVYGLLTMKNEQNGPIIRNVKESFKDLS 154
Query: 600 -------YQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEF 652
Y V ++ A YG+PQ R RVFL G +R + EF
Sbjct: 155 SFGNVHGYNVYTELLNAKDYGVPQNRERVFLIG------------------VRNDLNIEF 196
Query: 653 ERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQCFIRLRKD 711
E ++ E +E L+DAI DLPS+ N + D+ Y +P+T++Q +R +D
Sbjct: 197 E---WSFPEKCTSE--NPFNLRDAIGDLPSLGNNDRADQ--YVEDPQTDYQILMRGNQD 248
>gi|169977310|emb|CAQ18902.1| chromomethylase [Nicotiana sylvestris]
Length = 55
Score = 64.3 bits (155), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/50 (60%), Positives = 40/50 (80%), Gaps = 1/50 (2%)
Query: 166 DDEEEIIQAKCHYMWAEVDGHITYDLFDDAHVKAESGEEDYICKIVEMFE 215
DD +++IQAKCH+ A VDG I Y+L DDA+V+A + E+DYICKIVE F+
Sbjct: 7 DDADQLIQAKCHFAQAVVDGQI-YNLGDDAYVQASNDEDDYICKIVEFFQ 55
>gi|427708365|ref|YP_007050742.1| DNA-cytosine methyltransferase [Nostoc sp. PCC 7107]
gi|427360870|gb|AFY43592.1| DNA-cytosine methyltransferase [Nostoc sp. PCC 7107]
Length = 413
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 80/171 (46%), Gaps = 28/171 (16%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIV- 580
++D + G PCQG S + R D+P +N + F +V L+PK+ +MENV I
Sbjct: 75 EIDAVICGSPCQGFSLMGK-RVFDDP----RNSLVFHFHRLVLELQPKYFVMENVRGITV 129
Query: 581 ----KFAKGLLGRY-ALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPY 635
+ K L+ + + ++ NYQV + A YG+PQ R R+FL GA+ KLP Y
Sbjct: 130 GEHKQILKSLISEFQSHGYQVEENYQV----LNAAHYGVPQSRERLFLLGARRDVKLPKY 185
Query: 636 ALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNY 686
+ + P + + L + DAI D+P V+NY
Sbjct: 186 P----KAITQIAKPNQLIKKNA---------LPLSPTVWDAIGDIPEVENY 223
>gi|421654595|ref|ZP_16094922.1| putative modification methylase HaeIII [Acinetobacter baumannii
Naval-72]
gi|408510366|gb|EKK12028.1| putative modification methylase HaeIII [Acinetobacter baumannii
Naval-72]
Length = 309
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 63/128 (49%), Gaps = 7/128 (5%)
Query: 502 EKIKEFVTHGFKSKILP--LPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVF 559
I E + HG S I +P + DV+ GG PCQG S N R+ D D++N+ + F
Sbjct: 40 HNIGEHIVHGNISSIFSDTIP-ECDVVIGGFPCQGFSQANLKRSND----DDRNQLYLEF 94
Query: 560 MDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRM 619
+ IV KPK+ + ENV I+ G + + Y+++ + YG+PQ R
Sbjct: 95 LRIVTDKKPKYFVAENVRGILSLDGGNAIKKIIDDFKNAGYRIQYQLFNTADYGVPQTRY 154
Query: 620 RVFLWGAQ 627
RV + G +
Sbjct: 155 RVIIIGIR 162
>gi|385800071|ref|YP_005836475.1| DNA-cytosine methyltransferase [Halanaerobium praevalens DSM 2228]
gi|309389435|gb|ADO77315.1| DNA-cytosine methyltransferase [Halanaerobium praevalens DSM 2228]
Length = 328
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 2/106 (1%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
DVDVI GGPPCQG S R + D++N F+ IV +KP+ ++ENV + +
Sbjct: 69 DVDVIVGGPPCQGFSLAGRIGR--TFIEDDRNYLFNEFVRIVSIVKPEMFILENVARMAR 126
Query: 582 FAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQ 627
G + +++Y V+ ++ YG+PQ R R+ + G +
Sbjct: 127 HNNGNTIIEIINEFKKIDYDVKYEVLQTSDYGIPQRRKRIIIVGTK 172
>gi|428299219|ref|YP_007137525.1| DNA-cytosine methyltransferase [Calothrix sp. PCC 6303]
gi|428235763|gb|AFZ01553.1| DNA-cytosine methyltransferase [Calothrix sp. PCC 6303]
Length = 447
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 63/124 (50%), Gaps = 10/124 (8%)
Query: 521 GDVDVICGGPPCQG--VSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVD 578
G++D++ GGPPCQG V+G +K N L E F+ +V L P +MENV
Sbjct: 80 GEIDLVFGGPPCQGFSVAGQQNVEDKRNGLVGE-------FVRLVLELNPLAAIMENVPG 132
Query: 579 IVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALP 638
I G + L +++ +Y + + A YG+PQ R RVF ++ +PP LP
Sbjct: 133 IENQKFGCI-TANLQAVLEEHYFLSKWNLNASNYGVPQARKRVFFVASKFGNIMPPQQLP 191
Query: 639 THDV 642
H+V
Sbjct: 192 QHNV 195
>gi|422870278|ref|ZP_16916771.1| modification methylase DdeI [Streptococcus sanguinis SK1087]
gi|328946815|gb|EGG40952.1| modification methylase DdeI [Streptococcus sanguinis SK1087]
Length = 387
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 94/216 (43%), Gaps = 42/216 (19%)
Query: 502 EKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMD 561
E I H KSK + VD++ GGPPCQ S + + D++ K +
Sbjct: 61 EDIANIDKHFLKSKGIS-SKRVDLVIGGPPCQSFSTVGKRQ------YDKRAKMYREYRR 113
Query: 562 IVDFLKPKFVLMENVVDIVKF---AKGLLGRYALARLIQMN-------YQVRMGMMAAGA 611
I+ F++PK + ENV ++ G + R ++ Y V ++ A
Sbjct: 114 ILSFIQPKMFVFENVYGLLTMKNEQNGPIIRNVKESFNDLSSFGEASGYDVYTKLINAKD 173
Query: 612 YGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKL 671
+G+PQ R RVFL G +R + +FE + ++ L ++
Sbjct: 174 FGVPQNRERVFLIG------------------IRKDLKIKFE-----WTFPEETTLNNEI 210
Query: 672 LLQDAISDLPSVDNYESRDEIPYDREPETEFQCFIR 707
L+DAISDLP + N E ++ Y EP TE+Q +R
Sbjct: 211 TLRDAISDLPILGNNEQKNN--YICEPRTEYQALLR 244
>gi|367478095|ref|ZP_09477417.1| putative Cytosine-specific methyltransferase [Bradyrhizobium sp.
ORS 285]
gi|365269655|emb|CCD89885.1| putative Cytosine-specific methyltransferase [Bradyrhizobium sp.
ORS 285]
Length = 368
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 75/161 (46%), Gaps = 24/161 (14%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
DV+ GGPPCQG S N+ N + DE+ F+D+V+ + +MENV ++
Sbjct: 69 ADVVIGGPPCQGFSLLNK-----NRIGDERRALWEPFLDVVELSGARTFVMENVAELYSS 123
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
A+ L + R +M +++R ++ YG+PQ R R G + L P PT
Sbjct: 124 AEFLAIKR---RAKRMGFEMRAAVLNTADYGVPQTRKRTIALGFK--ANLVPSFPPT--- 175
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSV 683
PT + T+ L R ++DAI+DLP+
Sbjct: 176 ------PTHAQPETLL-----SKRLPRWRTVRDAIADLPAT 205
>gi|378732781|gb|EHY59240.1| DNA (cytosine-5-)-methyltransferase [Exophiala dermatitidis
NIH/UT8656]
Length = 611
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 68/141 (48%), Gaps = 5/141 (3%)
Query: 502 EKIKEFVTHGFKSKILP-LPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFM 560
E + +F+ +++I L VD+I PPCQ S N N+D +EKN+ + +
Sbjct: 345 EHVSDFLAAAAEARIKKNLKFFVDIIHLSPPCQPFSPANTTPNED---LNEKNRAALTSI 401
Query: 561 D-IVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRM 619
D I+ F KP+ +E + R + + Y VR ++ +G+PQ R
Sbjct: 402 DDILRFCKPRIATLEEAAGMEHPKHQGWLRKLVTMFVDHGYSVRWKVVTLKTFGVPQTRD 461
Query: 620 RVFLWGAQPTEKLPPYALPTH 640
R+ + + P EKLPP+ PTH
Sbjct: 462 RLIVIASGPGEKLPPFLAPTH 482
>gi|416221799|ref|ZP_11625950.1| DNA-cytosine methyltransferase [Moraxella catarrhalis 103P14B1]
gi|326564851|gb|EGE15057.1| DNA-cytosine methyltransferase [Moraxella catarrhalis 103P14B1]
Length = 288
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 60/121 (49%), Gaps = 6/121 (4%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP G VDVI GG PCQ VS K L ++ MDIVD LKP ++++ENV
Sbjct: 74 LPNGGQVDVIAGGFPCQDVS----VAGKRAGLKGKRTSLFFNAMDIVDTLKPTYLVLENV 129
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
++ G + + L Q Y ++ + +G+PQ R RVFL K PP++
Sbjct: 130 AGLISSNDGKDLQTVIETLAQCGYVGFWRVLDSRYFGVPQKRRRVFL--VAGLGKYPPFS 187
Query: 637 L 637
L
Sbjct: 188 L 188
>gi|170739778|ref|YP_001768433.1| DNA-cytosine methyltransferase [Methylobacterium sp. 4-46]
gi|168194052|gb|ACA15999.1| DNA-cytosine methyltransferase [Methylobacterium sp. 4-46]
Length = 423
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 65/127 (51%), Gaps = 12/127 (9%)
Query: 515 KILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLME 574
+++ L G +D++ GGPPCQG S R R+ +P +N+ + +++ VD ++PK VL+E
Sbjct: 79 ELVNLRGKIDLLAGGPPCQGFSSAGR-RHPGDP----RNQLVERYLEFVDAIRPKMVLIE 133
Query: 575 NVVDIV-KFAKG--LLGRYALARLIQM----NYQVRMGMMAAGAYGLPQFRMRVFLWGAQ 627
NV I FA G GR A I NY V + YG+PQ R R FL G
Sbjct: 134 NVRGITYDFAGGNEAEGRRNFANDIMCRLGENYHVYADTIRCSEYGVPQQRPRFFLVGLL 193
Query: 628 PTEKLPP 634
E P
Sbjct: 194 KFEGWEP 200
>gi|298492225|ref|YP_003722402.1| DNA-cytosine methyltransferase ['Nostoc azollae' 0708]
gi|298234143|gb|ADI65279.1| DNA-cytosine methyltransferase ['Nostoc azollae' 0708]
Length = 434
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 85/171 (49%), Gaps = 23/171 (13%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIV- 580
++DV+ GGPPCQG S + R+ D+P +N F+ +V L+P F ++ENV +
Sbjct: 75 EIDVVFGGPPCQGFSLIGK-RSIDDP----RNTLGFHFIRLVLELQPNFFVLENVKGMTV 129
Query: 581 ----KFAKGLLGRYA-LARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPY 635
+F ++ ++ + NYQ ++ A YG+PQ R R+FL G + KLP +
Sbjct: 130 GKHKEFTTEIIDKFENNGYKVNRNYQ----LLNAANYGVPQNRERLFLLGCRQDLKLPNH 185
Query: 636 ALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNY 686
D + P + N++A ++L + AI DLP ++NY
Sbjct: 186 P----DKITH---PAK-SNNSIACTTIALSKLPSTPTVLQAIQDLPEIENY 228
>gi|386858204|ref|YP_006262903.1| methyltransferase protein [Deinococcus gobiensis I-0]
gi|380002924|gb|AFD28110.1| methyltransferase protein [Deinococcus gobiensis I-0]
Length = 536
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 88/192 (45%), Gaps = 23/192 (11%)
Query: 518 PLPGDVDVICGGPPCQGVSGFNRFRNKD---NPLA---DEKNKQLIVFMDIVDFLKPKFV 571
P+ +DVI GGPPCQ + R + ++ +P A D +++ + ++ V+ +P +
Sbjct: 122 PVAEGIDVIVGGPPCQAFARVGRSKLREILEHPEAYRQDPRSRLYMEYLKYVEAFQPVAL 181
Query: 572 LMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQ---- 627
LMENV D++ + L + Y R ++ A YG+PQ R R+FL +
Sbjct: 182 LMENVPDVLNHGGQNIAEETAEFLEDLGYVARYTLLNAAYYGVPQMRERMFLVAYRQELG 241
Query: 628 -------PTE--KLPPYALPTHDVVL----RGVIPTEFERNTVAYDEGQQAELARKLLLQ 674
PT +LPP + V L RG + E + + +L + +
Sbjct: 242 QEVSFPLPTHWLRLPPGYEGSRQVALKFLKRGGLFEEAPQFRYVHPPEATPDLTPAVTAR 301
Query: 675 DAISDLPSVDNY 686
+A+SDLP++ +
Sbjct: 302 EALSDLPTITAH 313
>gi|14520267|ref|NP_125742.1| modification methylase [Pyrococcus abyssi GE5]
gi|5457482|emb|CAB48973.1| Citosine-specific modificatrion methylase [Pyrococcus abyssi GE5]
gi|380740788|tpe|CCE69422.1| TPA: modification methylase [Pyrococcus abyssi GE5]
Length = 309
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 57/107 (53%), Gaps = 10/107 (9%)
Query: 521 GDVDVICGGPPCQGVSGFNRFRNKDNP----LADEKNKQLIVFMDIVDFLKPKFVLMENV 576
GDVDVI GGPPC+ + N R K+NP D + ++ F+ V+ LKPK +MENV
Sbjct: 68 GDVDVIIGGPPCEPFTAINP-RRKENPKDRLYRDPIGRLVLEFVRFVERLKPKVFVMENV 126
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFL 623
I++ L +Y + Y + ++ A YG PQ R RVF+
Sbjct: 127 PQIME-----LEKYLRKEFDKAGYDIYFNVLNALDYGAPQVRRRVFI 168
>gi|387832218|ref|YP_003352155.1| cytosine specific DNA methyltransferase [Escherichia coli SE15]
gi|422357827|ref|ZP_16438492.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 110-3]
gi|422840183|ref|ZP_16888154.1| hypothetical protein ESPG_02840 [Escherichia coli H397]
gi|432498116|ref|ZP_19739900.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE216]
gi|432586158|ref|ZP_19822534.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE58]
gi|432689610|ref|ZP_19924867.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE161]
gi|432697197|ref|ZP_19932382.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE162]
gi|432757346|ref|ZP_19991884.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE22]
gi|432776716|ref|ZP_20010976.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE59]
gi|432790417|ref|ZP_20024540.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE65]
gi|432819183|ref|ZP_20052900.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE118]
gi|432825311|ref|ZP_20058971.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE123]
gi|432916554|ref|ZP_20121478.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE173]
gi|432923880|ref|ZP_20126387.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE175]
gi|432979201|ref|ZP_20167994.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE211]
gi|433099167|ref|ZP_20285322.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE139]
gi|433108638|ref|ZP_20294583.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE148]
gi|281181375|dbj|BAI57705.1| cytosine specific DNA methyltransferase [Escherichia coli SE15]
gi|315288374|gb|EFU47772.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 110-3]
gi|371607392|gb|EHN95966.1| hypothetical protein ESPG_02840 [Escherichia coli H397]
gi|431034220|gb|ELD46165.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE216]
gi|431124980|gb|ELE27424.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE58]
gi|431229021|gb|ELF25674.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE162]
gi|431233016|gb|ELF28616.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE161]
gi|431298084|gb|ELF87719.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE22]
gi|431332604|gb|ELG19826.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE59]
gi|431334264|gb|ELG21435.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE65]
gi|431371968|gb|ELG57672.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE118]
gi|431376502|gb|ELG61824.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE123]
gi|431449896|gb|ELH30462.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE173]
gi|431451112|gb|ELH31589.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE175]
gi|431499735|gb|ELH78753.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE211]
gi|431610682|gb|ELI79968.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE139]
gi|431621734|gb|ELI90525.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE148]
Length = 398
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 521 GDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIV 580
G++D+I GGPPCQG F+ R D + D +NK L+ + D V KPK L+ENV ++
Sbjct: 75 GELDMILGGPPCQG---FSSHRINDAGVDDPRNKLLLRYFDFVCEFKPKAFLVENVSGLL 131
Query: 581 -KFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQ 627
K + L R+ + ++ A YG+PQ R RVF+ G +
Sbjct: 132 WKRHEAHLKRFKFLASKNGYTLIHCDVLNARDYGVPQNRKRVFIAGVR 179
>gi|300775991|ref|ZP_07085850.1| possible DNA (cytosine-5-)-methyltransferase [Chryseobacterium
gleum ATCC 35910]
gi|300505124|gb|EFK36263.1| possible DNA (cytosine-5-)-methyltransferase [Chryseobacterium
gleum ATCC 35910]
Length = 415
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 88/184 (47%), Gaps = 30/184 (16%)
Query: 508 VTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLK 567
V +K + L G V ++ GGPPCQG S R RN+ DE+N + ++ V+++
Sbjct: 69 VLRTYKKNLKSLRGSVSLVAGGPPCQGFSMAGR-RNE----TDERNDLINSYIKFVEYVM 123
Query: 568 PKFVLMENVVDI-VKFA----KGLLGRYALARLIQ-MNYQVRMGMMAAGAYGLPQFRMRV 621
PK + ENV ++F KG+ + + +Q + Y V+ ++ G YG+PQ R R
Sbjct: 124 PKVIFFENVKGFTMEFKKNKEKGIAYSSVVTQKLQNLGYYVKGKLVNFGDYGVPQKRTRF 183
Query: 622 FLWGAQPTEKLPPYALPTHDVV-----LRGVIPTEFERNTVAYDEGQQAELARKLLLQDA 676
L G + +D+V + + E + ++ E + L++ LQDA
Sbjct: 184 ILIGVR------------NDIVNSSQEIVDNFFSSLESKSFSFLE--KRGLSKDTNLQDA 229
Query: 677 ISDL 680
ISDL
Sbjct: 230 ISDL 233
>gi|421875759|ref|ZP_16307343.1| DNA-cytosine methyltransferase family protein [Brevibacillus
laterosporus GI-9]
gi|372455266|emb|CCF16892.1| DNA-cytosine methyltransferase family protein [Brevibacillus
laterosporus GI-9]
Length = 405
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 63/118 (53%), Gaps = 18/118 (15%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDI--- 579
+DVI GGPPCQG S + R++++P +NK + ++ IV +KPK+ ++ENV I
Sbjct: 75 IDVIVGGPPCQGFSLTGK-RDENDP----RNKLFLDYLKIVKMVKPKYFVIENVEGILSY 129
Query: 580 -VKFAKGLLGRYALARLI---------QMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQ 627
VK KG+ G L+ + Y V ++ A YG+PQ R RV +G +
Sbjct: 130 KVKKLKGISGTIYEDELVPNIIQKETEKFGYFVEHKLLNAKDYGVPQNRPRVIFFGTR 187
>gi|197124335|ref|YP_002136286.1| DNA-cytosine methyltransferase [Anaeromyxobacter sp. K]
gi|196174184|gb|ACG75157.1| DNA-cytosine methyltransferase [Anaeromyxobacter sp. K]
Length = 508
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 90/198 (45%), Gaps = 47/198 (23%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLA------DEKNKQLIVFMDIVDFLKPKFVLMENV 576
+D++ GGPPCQG S R K LA D +N FM+ D +PK +++ENV
Sbjct: 80 LDILIGGPPCQGFSRIGR--GKLASLAGSRTAHDPRNTLYFAFMEAADRWQPKAIVIENV 137
Query: 577 -----VDI---------VKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVF 622
VD+ + FA+ A + L+ Y+ ++ A YG+PQ R R+F
Sbjct: 138 PGMLSVDVNSSSHPEEDLSFAEK-----AASDLVARGYRAGFAVLNAAMYGVPQLRERIF 192
Query: 623 LWGAQP----TEKLPP----------YALPTHDVVLRGVIPTEFERNTVAYDEGQQAELA 668
G + +PP Y +P+ ++ L P + + ++ D + + +
Sbjct: 193 FIGIRKDLAVRPSVPPSTHLIGTPSGYTVPSAELFL----PFDDIHHDLSVDTSKAS--S 246
Query: 669 RKLLLQDAISDLPSVDNY 686
R ++DAI DLP ++ +
Sbjct: 247 RATTVRDAIGDLPPIEEH 264
>gi|401882061|gb|EJT46335.1| cytosine-specific methyltransferase [Trichosporon asahii var.
asahii CBS 2479]
Length = 569
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 61/129 (47%), Gaps = 18/129 (13%)
Query: 521 GDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIV 580
G+V ++ GPPCQ + R N D + + + ++ P+ VL+ENV I
Sbjct: 299 GEVSLLVAGPPCQAFT-----RANHNRKVDARGHEPARLLRLISQTLPQLVLIENVPGI- 352
Query: 581 KFAKGLLGRYALA---------RLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEK 631
K G +A L+ + YQVR ++ A +YG PQ+R R+F+ GA
Sbjct: 353 ---KDRCGSDDVAWNAAEDVVRSLLGLGYQVRWAVLDAASYGAPQYRKRLFVLGAMTGTP 409
Query: 632 LPPYALPTH 640
LP + PTH
Sbjct: 410 LPRFPEPTH 418
>gi|18202059|sp|O52702.1|MTA1_ACEPA RecName: Full=Modification methylase ApaLI; Short=M.ApaLI; AltName:
Full=Cytosine-specific methyltransferase ApaLI
gi|2865599|gb|AAC97180.1| ApaLI methyltransferase [Acetobacter pasteurianus]
Length = 429
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 58/105 (55%), Gaps = 13/105 (12%)
Query: 525 VICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAK 584
V+ GGPPCQG S RN AD +N + +++IV+ L P++++ ENV ++
Sbjct: 74 VVIGGPPCQGFSTAGP-RN----FADPRNLLIFNYLNIVERLSPRWLIFENVEGLLTSGG 128
Query: 585 GLLGRYALARLIQ----MNYQVRMGMMAAGAYGLPQFRMRVFLWG 625
G LARL++ M Y VR+ + AYG+PQ R RV + G
Sbjct: 129 G----RDLARLVREFVDMGYSVRLQKVNLAAYGVPQTRKRVLIIG 169
>gi|381402080|ref|ZP_09926961.1| site-specific DNA-methyltransferase [Kingella kingae PYKK081]
gi|380832889|gb|EIC12776.1| site-specific DNA-methyltransferase [Kingella kingae PYKK081]
Length = 395
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 83/189 (43%), Gaps = 31/189 (16%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIV- 580
++ I GGPPCQG S +P D +N + +M V P F +MENV I+
Sbjct: 67 NISGIIGGPPCQGFS----LSGSRDP-KDPRNSLFMDYMRFVGDFNPSFFVMENVPGILS 121
Query: 581 -KFAKGLLGRYALARL-IQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALP 638
K G L + ++ + + Y V + + A YG+PQ R R+F G +
Sbjct: 122 AKTKNGQLVKEVISSVALSHGYNVHILHLNAANYGVPQARNRIFFIGIRQD--------- 172
Query: 639 THDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREP 698
+ ++R + P + + + + L DAISDLP ++ + + + Y P
Sbjct: 173 -YSFIMRYLQPEKITTD-------------KPITLWDAISDLPQIEAGQGVEVVDYADLP 218
Query: 699 ETEFQCFIR 707
+ +Q + R
Sbjct: 219 KNTYQAWCR 227
>gi|418028739|ref|ZP_12667291.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
gi|354691422|gb|EHE91350.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
Length = 498
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 66/130 (50%), Gaps = 18/130 (13%)
Query: 496 GLSNCGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQ 555
G+ N IK++V +VD++ GGPPCQG S NR R D+P +NK
Sbjct: 173 GIENISSHIKDYVNE-----------EVDMVAGGPPCQGFSEANRQRLIDDP----RNKL 217
Query: 556 LIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLP 615
+++ V L+PK +MENV ++K A +L + + +Y + ++ A +G+P
Sbjct: 218 YKYYVESVTALQPKVFVMENVKGMLKVAGQVLEDFNNS---ASHYDIYYKILNARNFGVP 274
Query: 616 QFRMRVFLWG 625
Q R R+ G
Sbjct: 275 QNRERLIYIG 284
>gi|241661827|ref|YP_002980187.1| DNA-cytosine methyltransferase [Ralstonia pickettii 12D]
gi|240863854|gb|ACS61515.1| DNA-cytosine methyltransferase [Ralstonia pickettii 12D]
Length = 398
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 68/128 (53%), Gaps = 6/128 (4%)
Query: 502 EKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMD 561
E I E FKS+ P D++ GGPPCQ GF+ R K + D +N + + +
Sbjct: 96 ENIMELSPERFKSENFPEGASCDIVLGGPPCQ---GFSVHRIKGAGVNDPRNGLIHRYFE 152
Query: 562 IVDFLKPKFVLMENVVDIV-KFAKGLLGRYALARLIQMNYQVRMGM-MAAGAYGLPQFRM 619
V L+PK LMENV ++ K L ++ LA ++ Y++ + + A YG+PQ R+
Sbjct: 153 YVKCLQPKAFLMENVPGLLWPRHKKYLNKF-LAESKKVGYRIIGPLRLDARNYGVPQRRV 211
Query: 620 RVFLWGAQ 627
RVF+ G +
Sbjct: 212 RVFVLGVR 219
>gi|406875189|gb|EKD25010.1| hypothetical protein ACD_80C00131G0013 [uncultured bacterium (gcode
4)]
Length = 358
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 91/195 (46%), Gaps = 42/195 (21%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
D+D + PPCQ VS + RN + L D +N + ++ + KPK++++ENV +K
Sbjct: 75 DIDFLIAWPPCQWVSVAGKNRNLNEMLKDSRNYLIKRVIEFIKLKKPKYIMIENVPAYLK 134
Query: 582 FAKGLLGRYALARLIQM-------NYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPP 634
L ++ LA +I++ Y V ++ + YG+PQ R R + KL
Sbjct: 135 L--KLPHKWNLATIIEILQDCFWKEYNVESRVLDSSEYGVPQKRTRAII-------KL-- 183
Query: 635 YALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIP- 693
+++ + + ++ RK+ ++DAI LPS++++E + IP
Sbjct: 184 -----------------YKKWLLRWRPKKE----RKITVKDAIWHLPSLESWE-KSSIPH 221
Query: 694 -YDREPETEFQCFIR 707
Y R+ E +++
Sbjct: 222 HYARQHTKEHVLWMK 236
>gi|225571372|ref|ZP_03780368.1| hypothetical protein CLOHYLEM_07470 [Clostridium hylemonae DSM
15053]
gi|225159848|gb|EEG72467.1| hypothetical protein CLOHYLEM_07470 [Clostridium hylemonae DSM
15053]
Length = 479
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 66/119 (55%), Gaps = 5/119 (4%)
Query: 519 LPGDV-DVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVV 577
L GDV ++ G PPCQG S R N+D + DE+N ++ ++ V LKP +++ENV
Sbjct: 69 LEGDVLHLLAGCPPCQGFSSIRRL-NRDEYIEDERNNLVLEYLRFVKELKPLTIMLENVP 127
Query: 578 DIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ K++ + + ++ ++ Y V + ++ +YG+PQ R R+ + G+ + PY
Sbjct: 128 ALEKYST---FQSVVEKIKKLGYFVEVKIVNVASYGVPQNRKRLVMIGSLIKKVHIPYG 183
>gi|119503900|ref|ZP_01625982.1| putative cytosine-specific methyltransferase [marine gamma
proteobacterium HTCC2080]
gi|119460408|gb|EAW41501.1| putative cytosine-specific methyltransferase [marine gamma
proteobacterium HTCC2080]
Length = 463
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 59/111 (53%), Gaps = 8/111 (7%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFM-DIVDFLKPKFVLMENVVDIV- 580
+D+ICGGPPCQG SG R+ D + QL M +I++F +PK L ENV ++
Sbjct: 113 LDLICGGPPCQGYSGIGHRRSYAVEKKDVPSNQLYEKMAEIIEFFRPKIFLFENVKGLLS 172
Query: 581 -----KFAKGLLGRYALARLIQM-NYQVRMGMMAAGAYGLPQFRMRVFLWG 625
+ AKG + + R + Y + +++A YG+PQ R RV L G
Sbjct: 173 SKWTDEGAKGEIWQDVWNRFNAIEGYTIHWQLVSAKDYGVPQNRPRVLLVG 223
>gi|409990392|ref|ZP_11273771.1| cytosine specific DNA methyltransferase [Arthrospira platensis str.
Paraca]
gi|291570060|dbj|BAI92332.1| type II DNA modification methyltransferase [Arthrospira platensis
NIES-39]
gi|409938741|gb|EKN80026.1| cytosine specific DNA methyltransferase [Arthrospira platensis str.
Paraca]
Length = 418
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 84/184 (45%), Gaps = 35/184 (19%)
Query: 500 CGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVF 559
CG+ + +F H + SKI V ++ GGPPCQG S K +P D +N F
Sbjct: 124 CGD-VNDFNPHQWLSKIGS--PSVHLVVGGPPCQGFS----VAGKRDP-NDPRNHLFQEF 175
Query: 560 MDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNY-QVRMGMMAAGAYGLPQFR 618
+ IV ++P +V+MENV I+ KG + + A + Y + + ++ + AYG+PQ R
Sbjct: 176 IRIVAEVRPWYVVMENVPGILTLKKGTIKQAIFAAFEAIGYTNISVAILESAAYGVPQIR 235
Query: 619 MRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAIS 678
R + K PY P ++P E++ ++ AIS
Sbjct: 236 PRAIFIANRFGMK-NPYPYPQ-------LVPEEYQ------------------TIESAIS 269
Query: 679 DLPS 682
DLP+
Sbjct: 270 DLPA 273
>gi|330927820|ref|XP_003302014.1| hypothetical protein PTT_13685 [Pyrenophora teres f. teres 0-1]
gi|311322847|gb|EFQ89880.1| hypothetical protein PTT_13685 [Pyrenophora teres f. teres 0-1]
Length = 1252
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 60/130 (46%), Gaps = 8/130 (6%)
Query: 515 KILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLME 574
K++ G+VD+I G PC G S RN +P + + F VD +P + ++E
Sbjct: 723 KLIARVGEVDLIVAGSPCPGFSSLQ--RNWKSPQSLCNASHISTFCSFVDVYRPLYGILE 780
Query: 575 NVVDIVKFAKGLLGRYAL----ARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTE 630
NVV++ KG + L A L+ M YQV +M A Y Q R R+ L A P
Sbjct: 781 NVVNMSSTRKGYENQNVLSQVVASLVSMGYQVNQYIMDAWCYSSKQQRSRIVLTIAAP-- 838
Query: 631 KLPPYALPTH 640
L P P H
Sbjct: 839 HLNPIQQPWH 848
>gi|200388503|ref|ZP_03215115.1| modification methylase HaeIII [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|199605601|gb|EDZ04146.1| modification methylase HaeIII [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
Length = 361
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 5/120 (4%)
Query: 508 VTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLK 567
+ H S+I P DVD++ GG PCQ S P D++ F+ +++ ++
Sbjct: 58 IRHSDISQIQSFP-DVDIVVGGYPCQSFS----MAGNRKPNNDDRTNLYKHFLRVLETVR 112
Query: 568 PKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQ 627
PK+ + ENV + G L YQV M+ A AYG+PQ R R+F+ G +
Sbjct: 113 PKYFVAENVSGLKHLGAGSFLEQQLTAYKAAGYQVSYHMVNARAYGVPQSRKRLFIIGVR 172
Score = 40.4 bits (93), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 52/97 (53%), Gaps = 14/97 (14%)
Query: 331 VGEPQKMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETE 390
V E + ++++L L+SGCG M G+ AG ++V +A D+ E AC++L P+T+
Sbjct: 4 VFERENDNIRVLSLFSGCGGMDFGIT----SAGGDIV--FANDVVENACKTLGNYFPDTD 57
Query: 391 VRN------ESAEDFLTLLREWEKLCISFSLIARKDP 421
+R+ +S D ++ + C SFS+ + P
Sbjct: 58 IRHSDISQIQSFPDVDIVVGGYP--CQSFSMAGNRKP 92
>gi|326469309|gb|EGD93318.1| hypothetical protein TESG_00865 [Trichophyton tonsurans CBS 112818]
Length = 584
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 77/185 (41%), Gaps = 41/185 (22%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQ-LIVFMDIVDFLKPKFVLMENVVDIVK 581
VDVI PPCQ S DE N+ L +++ KP+ ME
Sbjct: 342 VDVIHVSPPCQPFSPAKTIAAAH----DEANEACLFSIYRLIELCKPRVATMEQT----- 392
Query: 582 FAKGLLGRYA------LARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPY 635
GL R+ + LI++ Y VR ++ YG+PQ R R+ L A P E+LPP+
Sbjct: 393 --SGLKQRHPVWLDAIIHSLIELGYSVRWRLVNCKDYGVPQSRCRLILIAAGPGEELPPF 450
Query: 636 ALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSV--DNYESRDEIP 693
PTH DE + L L DAI +PS D+ R E P
Sbjct: 451 PQPTHG------------------DEPGKRPLVTIL---DAIGSIPSTAPDHDLERAERP 489
Query: 694 YDREP 698
++R+P
Sbjct: 490 FERQP 494
>gi|440683449|ref|YP_007158244.1| DNA-cytosine methyltransferase [Anabaena cylindrica PCC 7122]
gi|428680568|gb|AFZ59334.1| DNA-cytosine methyltransferase [Anabaena cylindrica PCC 7122]
Length = 449
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 80/171 (46%), Gaps = 29/171 (16%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
++DV+ GGPPCQG S + L D +N + ++ +V L+PKFV++ENV +
Sbjct: 100 EIDVLFGGPPCQGFSLIGK-----RLLDDPRNSLVFHYIRLVLELQPKFVVLENVKGMTV 154
Query: 582 FAKGLLGRYALARLIQMNYQVRM--GMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPT 639
++ +NY+V ++ A YG+PQ R R+FL + LP Y P
Sbjct: 155 GKHREFILEVISAFAAINYKVYQDYQVLNAANYGVPQNRERLFLLACRQDLDLPNYPQP- 213
Query: 640 HDVVLRGVIPTEFERNTVAYDEGQQAELARKLLL----QDAISDLPSVDNY 686
Y + ++A + +LLL + A+ DLP ++NY
Sbjct: 214 ----------------ITTYIKKKKA-INNQLLLTPSVKKALQDLPIIENY 247
>gi|228478395|ref|ZP_04063003.1| modification methylase HaeIII [Streptococcus salivarius SK126]
gi|228250074|gb|EEK09344.1| modification methylase HaeIII [Streptococcus salivarius SK126]
Length = 387
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 86/199 (43%), Gaps = 43/199 (21%)
Query: 520 PGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDI 579
P VD++ GGPPCQ S + + D++ K + I+ F++PK + ENV +
Sbjct: 78 PKGVDLVIGGPPCQSFSTVGKRQ------YDKRAKMYREYRRILSFIQPKMFVFENVYGL 131
Query: 580 VKF---AKGLLGRYALARLIQMN-------YQVRMGMMAAGAYGLPQFRMRVFLWGAQPT 629
+ G + R ++ Y V ++ A +G+PQ R RVFL G +
Sbjct: 132 LTMKNEQNGPIIRNVKESFNDLSSFGDVSGYNVYTKLINAKDFGVPQNRERVFLIGVRKD 191
Query: 630 EKLPP-YALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYES 688
K+ + P ++ L ++ L+DAISDLP + N E
Sbjct: 192 LKIKSEWIFP------------------------EETSLNNEITLRDAISDLPILGNNEQ 227
Query: 689 RDEIPYDREPETEFQCFIR 707
+ Y EP+TE+Q +R
Sbjct: 228 K--YNYICEPKTEYQALLR 244
>gi|79835472|gb|ABB52097.1| Mod [Arthrospira platensis]
Length = 321
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 84/184 (45%), Gaps = 35/184 (19%)
Query: 500 CGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVF 559
CG+ + +F H + SKI V ++ GGPPCQG S K +P D +N F
Sbjct: 124 CGD-VNDFNPHQWLSKIGS--PSVHLVVGGPPCQGFS----VAGKRDP-NDPRNHLFQEF 175
Query: 560 MDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNY-QVRMGMMAAGAYGLPQFR 618
+ IV ++P +V+MENV I+ KG + + A + Y + + ++ + AYG+PQ R
Sbjct: 176 IRIVAEVRPWYVVMENVPGILTLKKGTIKQAIFAAFEAIGYTNISVAILESAAYGVPQIR 235
Query: 619 MRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAIS 678
R + K PY P ++P E++ ++ AIS
Sbjct: 236 PRAIFIANRFGMKN-PYPYPQ-------LVPEEYQT------------------IESAIS 269
Query: 679 DLPS 682
DLP+
Sbjct: 270 DLPA 273
>gi|357390490|ref|YP_004905331.1| putative DNA methyltransferase [Kitasatospora setae KM-6054]
gi|311896967|dbj|BAJ29375.1| putative DNA methyltransferase [Kitasatospora setae KM-6054]
Length = 676
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 60/113 (53%), Gaps = 8/113 (7%)
Query: 518 PLPGDVDVICGGPPCQGVSGFNRFRNKD-------NPLADEKNKQLIVFMDIVDFLKPKF 570
P G +D++ GGPPCQ S R + +D NP+ D + + ++ I++ +KP+
Sbjct: 119 PAAGRIDLVAGGPPCQPFSRAGRSKIRDLVENHGRNPV-DLRKELWRSYLRIIEVVKPRA 177
Query: 571 VLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFL 623
VLMENV D+ + R+ RL Y ++ ++ A YG+PQ R R+ L
Sbjct: 178 VLMENVPDMGLSDDFRVVRFIEQRLENAGYATQVRLVDAWRYGVPQHRKRLIL 230
>gi|171684935|ref|XP_001907409.1| hypothetical protein [Podospora anserina S mat+]
gi|170942428|emb|CAP68080.1| unnamed protein product [Podospora anserina S mat+]
Length = 752
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 69/163 (42%), Gaps = 17/163 (10%)
Query: 487 SEDTWEP--------IEGLSNCGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGF 538
S D WEP G +++ +FVT + P D++ PPCQ S
Sbjct: 354 SLDHWEPAARSLRRNFPGTHIYQKEVTDFVT----EDLPPEHSYPDILHLSPPCQFWSPA 409
Query: 539 NRFRNKDNPLADEKN-KQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQ 597
+ KD DEKN L D++ L+P+ +E +V L L
Sbjct: 410 HTVAGKD----DEKNIAVLFSCTDLIKKLRPRVFTVEQTFGLVHDRFRLYFHTFLQGFTS 465
Query: 598 MNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTH 640
Y +R ++ YGL Q R R+ + GA P EKLPP+ PTH
Sbjct: 466 HGYSLRYKILHLNQYGLAQTRRRLVIIGAGPGEKLPPFPPPTH 508
>gi|167746072|ref|ZP_02418199.1| hypothetical protein ANACAC_00767 [Anaerostipes caccae DSM 14662]
gi|373121713|ref|ZP_09535580.1| DNA (cytosine-5-)-methyltransferase [Erysipelotrichaceae bacterium
21_3]
gi|167654587|gb|EDR98716.1| DNA (cytosine-5-)-methyltransferase [Anaerostipes caccae DSM 14662]
gi|371664692|gb|EHO29861.1| DNA (cytosine-5-)-methyltransferase [Erysipelotrichaceae bacterium
21_3]
Length = 476
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 13/105 (12%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
VDV+ GGPPCQG S NR R D+P +NK ++ +V + PKF +MENV
Sbjct: 176 VDVVVGGPPCQGFSMANRQRLIDDP----RNKLYKSYVKVVSIVSPKFFVMENV------ 225
Query: 583 AKGL--LGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWG 625
KG+ + + + Y+V ++ A +G+PQ R R+ G
Sbjct: 226 -KGMKSVSSQVIEDFTNIGYKVSCRILNAKDFGVPQNRERLIFIG 269
>gi|302504717|ref|XP_003014317.1| C-5 cytosine methyltransferase DmtA [Arthroderma benhamiae CBS
112371]
gi|291177885|gb|EFE33677.1| C-5 cytosine methyltransferase DmtA [Arthroderma benhamiae CBS
112371]
Length = 644
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 77/185 (41%), Gaps = 41/185 (22%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQ-LIVFMDIVDFLKPKFVLMENVVDIVK 581
VDV+ PPCQ S DE N+ L +++ KP+ ME
Sbjct: 341 VDVMHVSPPCQPFSPAKTIAAAH----DEANEACLFSIYRLIELCKPRVATMEQ------ 390
Query: 582 FAKGLLGRYAL------ARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPY 635
GL R+ + LI++ Y VR ++ YG+PQ R R+ L A P E+LPP+
Sbjct: 391 -TSGLKQRHPIWLDAIIHSLIELGYSVRWRLVNCKDYGVPQSRCRLILIAAGPGEELPPF 449
Query: 636 ALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSV--DNYESRDEIP 693
PTH DE + L L DAIS +PS D+ R E P
Sbjct: 450 PQPTHG------------------DEPGKLPLVTIL---DAISGIPSTAPDHDLERAERP 488
Query: 694 YDREP 698
++R P
Sbjct: 489 FERRP 493
>gi|357410515|ref|YP_004922251.1| DNA-cytosine methyltransferase [Streptomyces flavogriseus ATCC
33331]
gi|320007884|gb|ADW02734.1| DNA-cytosine methyltransferase [Streptomyces flavogriseus ATCC
33331]
Length = 660
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 98/211 (46%), Gaps = 50/211 (23%)
Query: 520 PGDVDVICGGPPCQGVS--GFNRFR----NKDNPLADEKNKQLIVFMDIVDFLKPKFVLM 573
P +D++ GGPPCQ S G ++ R + D + + ++D+V L+P+ VLM
Sbjct: 107 PAKIDLVAGGPPCQPFSRAGRSKIRSLVEHHGRDPQDRRKELWSAYLDVVKRLRPRAVLM 166
Query: 574 ENVVDIVKFAKGLLGRYALARLIQ-----MNYQVRMGMMAAGAYGLPQFRMRVFLWGAQP 628
ENV D+ GL + + R I+ + Y ++ ++ A YG+PQ R R+ L
Sbjct: 167 ENVPDM-----GLGDDFFVVRTIEEQLENLGYATQVRLVDAWKYGVPQHRKRLIL----- 216
Query: 629 TEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSV----D 684
L +DV ER + Q+ E ++ L+DAI DLP +
Sbjct: 217 --------LARNDV----------ER----FSWRQELEQEQRTTLRDAIGDLPVLPVVPT 254
Query: 685 NYESRDEIPYDREPETEFQCFIR-LRKDGKK 714
+ E+PYD EP +E F + +RK +K
Sbjct: 255 ERVGQRELPYD-EP-SELSGFGKDMRKWARK 283
>gi|257069715|ref|YP_003155970.1| DNA-methyltransferase Dcm [Brachybacterium faecium DSM 4810]
gi|256560533|gb|ACU86380.1| DNA-methyltransferase Dcm [Brachybacterium faecium DSM 4810]
Length = 431
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 87/183 (47%), Gaps = 35/183 (19%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
++ ++ GGPPCQG+S R R D+P +N L F+ +V LKP++ +MENV +
Sbjct: 77 EIHLVAGGPPCQGISMIGR-RAIDDP----RNALLKEFVRLVLELKPRYFVMENVAGL-- 129
Query: 582 FAKGLLGRY-----ALARLIQMNYQVR----MGMMAAGAYGLPQFRMRVFLWGAQPTEKL 632
++G++ + +++ + + R + ++ A +G PQ R RV + G++ L
Sbjct: 130 ----MVGKHRQLVDEVVEMVEADDEYRVVTPIKVLQAADFGTPQSRKRVIVMGSRKDVTL 185
Query: 633 PPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEI 692
P Y TH T+ + + L + DAI DLP D + DE+
Sbjct: 186 PEYPSVTH------------APRTIKGGQPSKGTLPTGPSVFDAIGDLPDPDQF---DEL 230
Query: 693 PYD 695
+D
Sbjct: 231 LHD 233
>gi|403058608|ref|YP_006646825.1| Modification methylase FnuDI [Pectobacterium carotovorum subsp.
carotovorum PCC21]
gi|402805934|gb|AFR03572.1| Modification methylase FnuDI [Pectobacterium carotovorum subsp.
carotovorum PCC21]
Length = 361
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 5/120 (4%)
Query: 508 VTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLK 567
V H S+I P DVD++ GG PCQ S P D++ F+ +++ ++
Sbjct: 58 VIHSDISQIQSFP-DVDIVVGGYPCQSFS----MAGNRKPNNDDRTNLYKHFLRVLETVR 112
Query: 568 PKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQ 627
PK+ + ENV + G L YQV ++ A AYG+PQ R R+F+ G +
Sbjct: 113 PKYFVAENVSGLKHLGAGSFLEQQLTAYKAAGYQVSYHLVNARAYGVPQSRKRLFIIGVR 172
>gi|209809294|ref|YP_002264832.1| putative C-5 cytosine-specific DNA methylase [Aliivibrio
salmonicida LFI1238]
gi|208010856|emb|CAQ81257.1| putative C-5 cytosine-specific DNA methylase [Aliivibrio
salmonicida LFI1238]
Length = 387
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 71/135 (52%), Gaps = 12/135 (8%)
Query: 521 GDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIV 580
G++D+I GGPPCQ GF+ R + + D +N L+ + + V +PK L+ENV ++
Sbjct: 76 GELDLILGGPPCQ---GFSTHRINNAGVNDPRNALLLRYFEFVHEFQPKAFLVENVAGLL 132
Query: 581 -KFAKGLLGRYALARLIQMNYQVRM-GMMAAGAYGLPQFRMRVFLWGA----QPTEKLPP 634
K + L ++ L + Y++ G++ A +G+PQ R RVF+ G + T PP
Sbjct: 133 WKRHEDFLNKF-LQLAAKEGYEITFCGILNAKDFGVPQNRKRVFIHGVRKDIKSTVSFPP 191
Query: 635 YALPTHDVVLRGVIP 649
A TH G+ P
Sbjct: 192 EA--THFSPTSGLAP 204
>gi|418966068|ref|ZP_13517820.1| DNA binding domain protein, excisionase family [Streptococcus
constellatus subsp. constellatus SK53]
gi|383340945|gb|EID19224.1| DNA binding domain protein, excisionase family [Streptococcus
constellatus subsp. constellatus SK53]
Length = 458
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 62/129 (48%), Gaps = 15/129 (11%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIV-- 580
VD+I G PPCQ S + D DE+ + ++ I+ +KP +V++ENV ++
Sbjct: 145 VDIIFGDPPCQAFSTAGNRKAFD----DERGNVFLKYLSIISEIKPTYVVIENVRGLLST 200
Query: 581 --KFA------KGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKL 632
K+ KG L RL +M Y V + A +G PQ R RV + G EK+
Sbjct: 201 PFKYGDLEEPIKGGAMMIILDRLKEMGYSVSFNLYNAAYFGAPQIRERVVIIGKLGDEKV 260
Query: 633 PPYALPTHD 641
Y PTH+
Sbjct: 261 -SYLQPTHN 268
>gi|327309192|ref|XP_003239287.1| hypothetical protein TERG_01268 [Trichophyton rubrum CBS 118892]
gi|326459543|gb|EGD84996.1| hypothetical protein TERG_01268 [Trichophyton rubrum CBS 118892]
Length = 622
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 77/185 (41%), Gaps = 41/185 (22%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQ-LIVFMDIVDFLKPKFVLMENVVDIVK 581
VDV+ PPCQ S DE N+ L +++ KP+ ME
Sbjct: 380 VDVMHVSPPCQPFSPAKTIAAAH----DEANEACLFSIYRLIELCKPRVATMEQT----- 430
Query: 582 FAKGLLGRYA------LARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPY 635
GL R+ + LI++ Y VR ++ YG+PQ R R+ L A P E+LPP+
Sbjct: 431 --SGLKQRHPVWLDAIIHSLIELGYSVRWRLVNCKDYGVPQSRCRLILIAAGPGEELPPF 488
Query: 636 ALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSV--DNYESRDEIP 693
PTH DE + L + DAIS +PS D+ R E P
Sbjct: 489 PQPTHG------------------DEPGKLPL---FTILDAISGIPSTAPDHDLERAERP 527
Query: 694 YDREP 698
++R P
Sbjct: 528 FERRP 532
>gi|442321299|ref|YP_007361320.1| DNA-cytosine methyltransferase [Myxococcus stipitatus DSM 14675]
gi|441488941|gb|AGC45636.1| DNA-cytosine methyltransferase [Myxococcus stipitatus DSM 14675]
Length = 559
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 81/184 (44%), Gaps = 23/184 (12%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNP------------LADEKNKQLIVFMDIVDFLKPKF 570
+DV+ GGPPCQ + R + ++ L D + ++ + KP
Sbjct: 143 IDVLVGGPPCQAFARVGRAKLREQAHRRQEATADQAFLVDGRVSLWQRYVHFIRATKPVA 202
Query: 571 VLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWG-AQPT 629
+LMENV DI+ + L++ Y V ++ A YG+PQ R R+ L G + T
Sbjct: 203 LLMENVPDILNHGGSNVAELVSKSLVEEGYSVAYTLLNAAWYGVPQTRERMILIGFHRAT 262
Query: 630 EKLPPYALPTHDVVL-RGVIPTEFERNTVAYDEGQQ-----AELARKL----LLQDAISD 679
+P + PTH V L G ++ V ++EG + A+ R L A++D
Sbjct: 263 GIMPRFPSPTHHVDLPSGYTSSKNTARRVIHEEGSEYHRWMADPTRSLSPATTASQALTD 322
Query: 680 LPSV 683
LP +
Sbjct: 323 LPPL 326
>gi|423066558|ref|ZP_17055348.1| DNA-cytosine methyltransferase [Arthrospira platensis C1]
gi|406711866|gb|EKD07064.1| DNA-cytosine methyltransferase [Arthrospira platensis C1]
Length = 605
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 12/128 (9%)
Query: 500 CGEKIKEFVTHGFKSKILPLPGD--VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLI 557
CG+ ++E T +I L GD +++ICGGPPCQG S N D++N +
Sbjct: 56 CGD-LREIST----EQIRELIGDRHINLICGGPPCQGFSTIGSNNN-----LDKRNFLFL 105
Query: 558 VFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQF 617
F+ V+ LKP ++++ENV ++ L L + Y V + +++A YG+P+
Sbjct: 106 EFLRFVEQLKPDYIIIENVTGLLSRKNENTLTSILTCLQNIGYTVDVRVLSAHHYGVPEK 165
Query: 618 RMRVFLWG 625
R R G
Sbjct: 166 RRRTIFLG 173
>gi|1644234|dbj|BAA11339.1| ApaLI methylase [Acetobacter pasteurianus]
Length = 429
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 13/105 (12%)
Query: 525 VICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAK 584
V+ GGPPCQG S RN AD +N + +++IV+ L P++ + ENV ++
Sbjct: 74 VVIGGPPCQGFSTAGP-RN----FADPRNLLIFNYLNIVERLSPRWFIFENVEGLLTSGG 128
Query: 585 GLLGRYALARLIQ----MNYQVRMGMMAAGAYGLPQFRMRVFLWG 625
G LARL++ M Y VR+ + AYG+PQ R RV + G
Sbjct: 129 G----RDLARLVREFVDMGYSVRLQKVNLAAYGVPQTRKRVLIIG 169
>gi|420421857|ref|ZP_14920935.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4110]
gi|393038375|gb|EJB39409.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4110]
Length = 188
Score = 63.2 bits (152), Expect = 5e-07, Method: Composition-based stats.
Identities = 37/121 (30%), Positives = 58/121 (47%), Gaps = 9/121 (7%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ ++D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKIFVFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLP---PYALPT 639
KG L + + Y + ++ A YG+PQ R RV L G + K P + T
Sbjct: 121 QKGQLFQQICNAFKERGYILEHAILNALDYGVPQIRERVILVGTLKSFKQKFYFPKPIKT 180
Query: 640 H 640
H
Sbjct: 181 H 181
>gi|420417788|ref|ZP_14916883.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4044]
gi|393030969|gb|EJB32042.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4044]
Length = 362
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 4/117 (3%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
VD++ GG PCQ F+ NK L D + ++ +++ +KPK + ENV +++
Sbjct: 101 VDILVGGSPCQS---FSSIGNKLG-LEDTRGTLFYDYIRVLNEIKPKVFIFENVYGMLRH 156
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPT 639
KG ++Y + G++ A YG+PQ R R+FL G + EK + P+
Sbjct: 157 DKGKTFEVIQKAFESLDYHYKYGILDARNYGIPQGRRRLFLVGFKEQEKCANFTFPS 213
>gi|302654293|ref|XP_003018954.1| C-5 cytosine methyltransferase DmtA [Trichophyton verrucosum HKI
0517]
gi|291182644|gb|EFE38309.1| C-5 cytosine methyltransferase DmtA [Trichophyton verrucosum HKI
0517]
Length = 582
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 77/185 (41%), Gaps = 41/185 (22%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQ-LIVFMDIVDFLKPKFVLMENVVDIVK 581
VDV+ PPCQ S DE N+ L +++ KP+ ME
Sbjct: 340 VDVMHVSPPCQPFSPAKTIAAAH----DEANEACLFSIYRLIELCKPRVATMEQT----- 390
Query: 582 FAKGLLGRYAL------ARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPY 635
GL R+ + LI++ Y VR ++ YG+PQ R R+ L A P E+LPP+
Sbjct: 391 --SGLKQRHPIWLDAIIHSLIELGYSVRWRLVNCKDYGVPQSRCRLILIAAGPGEELPPF 448
Query: 636 ALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSV--DNYESRDEIP 693
PTH DE + L L DAIS +PS D+ R E P
Sbjct: 449 PQPTHG------------------DEPGKLPLVTIL---DAISGIPSTAPDHDLERAERP 487
Query: 694 YDREP 698
++R P
Sbjct: 488 FERRP 492
>gi|374988544|ref|YP_004964039.1| DNA-cytosine methyltransferase [Streptomyces bingchenggensis BCW-1]
gi|297159196|gb|ADI08908.1| DNA-cytosine methyltransferase [Streptomyces bingchenggensis BCW-1]
Length = 664
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 61/121 (50%), Gaps = 6/121 (4%)
Query: 518 PLPGDVDVICGGPPCQGVS--GFNRFR----NKDNPLADEKNKQLIVFMDIVDFLKPKFV 571
P G +D++ GGPPCQ S G ++ R + D + + ++D+V +KP+ V
Sbjct: 107 PAKGKIDLVAGGPPCQPFSRAGRSKIRSLVEHHGRDAHDLRKELWSAYLDVVKRIKPRAV 166
Query: 572 LMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEK 631
LMENV D+ + R +L ++ Y ++ ++ A YG+PQ R R+ L EK
Sbjct: 167 LMENVPDMGLGDDFFVVRVIEQQLEELGYATQVRLVDAWRYGVPQHRKRLILLARNDIEK 226
Query: 632 L 632
Sbjct: 227 F 227
>gi|420414315|ref|ZP_14913435.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4099]
gi|420419420|ref|ZP_14918510.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4076]
gi|393026649|gb|EJB27746.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4099]
gi|393031326|gb|EJB32398.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4076]
Length = 369
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 4/117 (3%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
VD++ GG PCQ F+ NK L D + ++ +++ +KPK + ENV +++
Sbjct: 108 VDILVGGSPCQS---FSSIGNKLG-LEDTRGTLFYDYIRVLNEIKPKVFIFENVYGMLRH 163
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPT 639
KG ++Y + G++ A YG+PQ R R+FL G + EK + P+
Sbjct: 164 DKGKTFEIIQKAFESLDYHYKYGILDARNYGIPQGRRRLFLVGFKEQEKCANFTFPS 220
>gi|302876802|ref|YP_003845435.1| DNA-cytosine methyltransferase [Clostridium cellulovorans 743B]
gi|307687485|ref|ZP_07629931.1| DNA-cytosine methyltransferase [Clostridium cellulovorans 743B]
gi|302579659|gb|ADL53671.1| DNA-cytosine methyltransferase [Clostridium cellulovorans 743B]
Length = 363
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 87/190 (45%), Gaps = 35/190 (18%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+DV+ GGPPCQG F+ +D + D++N + + + + L+P+ V++ENV +++
Sbjct: 76 LDVLVGGPPCQG---FSIAGPRD--MNDKRNSLYVAMVKLAERLQPQAVVLENVPGMIQT 130
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
G+ + + ++ Y++ ++ A YG+PQ R RVF G + ++
Sbjct: 131 NGGIGAKRIIEDFKEIGYRMTPKLLYAPDYGIPQIRKRVFFVGLRNSD------------ 178
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEI-----PYDRE 697
TEFE D+ + +DAI DLPS+ E Y E
Sbjct: 179 -------TEFEFPEAFVDK------ENYVTSEDAIGDLPSLQTAEGEIIYGEEEQSYISE 225
Query: 698 PETEFQCFIR 707
P+ +Q +R
Sbjct: 226 PQNAYQRLMR 235
>gi|448626675|ref|ZP_21671454.1| DNA-cytosine methyltransferase [Haloarcula vallismortis ATCC 29715]
gi|445760287|gb|EMA11551.1| DNA-cytosine methyltransferase [Haloarcula vallismortis ATCC 29715]
Length = 452
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 64/125 (51%), Gaps = 23/125 (18%)
Query: 521 GDVDVICGGPPCQ-----GVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMEN 575
G++D++ GGPPC G S N +DN +DE++ F+ VD +PK LMEN
Sbjct: 69 GELDLVAGGPPCPTFSLVGRSKINSLEGRDN-QSDERHLLYEEFLRFVDHYQPKAFLMEN 127
Query: 576 V--------------VDIVKFAKGLLGRYALARL-IQMNYQVRMGMMAAGAYGLPQFRMR 620
V VD +K + + G +A + + ++Y V++ ++ + YG+PQ R R
Sbjct: 128 VEGMLSAENEDGKPVVDTIK--EQMRGEREVADMDLDLDYNVKVQLLDSANYGVPQHRSR 185
Query: 621 VFLWG 625
+F G
Sbjct: 186 LFFIG 190
>gi|425782435|gb|EKV20344.1| C-5 cytosine methyltransferase DmtA [Penicillium digitatum Pd1]
Length = 627
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 76/170 (44%), Gaps = 15/170 (8%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
VD+ PPCQ ++ P D + + ++ +P+ + ME + + +
Sbjct: 385 VDIAHCSPPCQT---WSPAHTVPCPRDDANSACVFSAGSLIRESRPRVLTMEETMGLPQR 441
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
+ R L +++ Y VR ++ YG+PQ R R+ L A P E LP YA PTH V
Sbjct: 442 FPVIFNRVVL-DMVEFGYSVRWSVLGCDEYGVPQERKRLLLIAAGPGEVLPHYAQPTHGV 500
Query: 643 VLRGVIPTEFERNTV------AYDEGQQAELARKLLLQDAISDLPSVDNY 686
G++P E +T+ A D + LAR A+S PS + +
Sbjct: 501 PGHGLLPRETISSTIDNIPPDADDHNVEGALARW-----ALSHRPSFNRH 545
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 6/59 (10%)
Query: 343 DLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLT 401
D Y G G G+ GA AG+ L +WAVDI+++A ++ +LN E EV + FLT
Sbjct: 325 DAYCGAG----GVSCGAKQAGVKL--QWAVDIDKHALETYQLNFHEVEVEHSDFFSFLT 377
>gi|308185228|ref|YP_003929361.1| DNA-cytosine methyltransferase [Helicobacter pylori SJM180]
gi|308061148|gb|ADO03044.1| DNA-cytosine methyltransferase [Helicobacter pylori SJM180]
Length = 368
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 4/117 (3%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
VD++ GG PCQ F+ NK L D + ++ +++ +KPK + ENV +++
Sbjct: 107 VDILVGGSPCQS---FSSIGNKLG-LEDTRGTLFYDYIRVLNEIKPKVFIFENVYGMLRH 162
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPT 639
KG ++Y + G++ A YG+PQ R R+FL G + EK + P+
Sbjct: 163 DKGKTFEIIQKAFESLDYHYKYGILDARNYGIPQGRRRLFLVGFKEQEKCANFTFPS 219
>gi|420504023|ref|ZP_15002553.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-62]
gi|393155412|gb|EJC55689.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-62]
Length = 203
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 55/109 (50%), Gaps = 6/109 (5%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ I+D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRILDLVKPKIFVFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEK 631
KG L + + Y + ++ A YG+PQ R RV L GA + K
Sbjct: 121 QKGQLFQRICNAFKERGYILEHAILNALDYGVPQVRERVILVGAHKSFK 169
>gi|452840104|gb|EME42042.1| hypothetical protein DOTSEDRAFT_72966 [Dothistroma septosporum
NZE10]
Length = 1172
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 69/138 (50%), Gaps = 22/138 (15%)
Query: 514 SKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADE--KNKQLIV-FMDIVDFLKPKF 570
++ + LPG V +I G PC G S R + N L+D+ +N ++ + VDF P++
Sbjct: 742 NRHVALPGQVQLISAGSPCPGFS-----RLQTNMLSDDSRRNASMVASVVAFVDFYVPEY 796
Query: 571 VLMENVVDIVKFAKGLLGR--------YALARLIQMNYQVRMGMMAAGAYGLPQFRMRVF 622
++ENVV + +GR +A L+ + YQV+ +M A +YG Q R RVF
Sbjct: 797 FVLENVVSMTSG----MGRNKDENVFSQIIAALVGLGYQVQQFLMDAWSYGSSQQRSRVF 852
Query: 623 LWGAQPTEKLPPYALPTH 640
+ + LPP P H
Sbjct: 853 IIAS--AAGLPPLKQPQH 868
>gi|169600411|ref|XP_001793628.1| hypothetical protein SNOG_03039 [Phaeosphaeria nodorum SN15]
gi|160705432|gb|EAT89770.2| hypothetical protein SNOG_03039 [Phaeosphaeria nodorum SN15]
Length = 1146
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 70/150 (46%), Gaps = 13/150 (8%)
Query: 511 GFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKF 570
G +++P G V++I G PC G S + N +P + + + VD +P++
Sbjct: 593 GSDDQLVPYIGCVNIILAGSPCPGFSTLQQ--NFTSPQSIKNASHITTICSYVDIYRPEY 650
Query: 571 VLMENVVDIVKFAKGLLGRYALARL----IQMNYQVRMGMMAAGAYGLPQFRMRVFLWGA 626
++ENVV + KG + L++L + + YQV +M A +G Q R R+ L A
Sbjct: 651 AILENVVSMADTRKGFEDQNVLSQLVAFFVSLGYQVNQYIMDAWTFGSCQRRSRLILTIA 710
Query: 627 QPT-----EKLPPYALPTHDVVLR--GVIP 649
P + L ++LP D R G +P
Sbjct: 711 APGLDMIRQPLHTHSLPPDDTAARSLGTLP 740
>gi|425773859|gb|EKV12184.1| C-5 cytosine methyltransferase DmtA [Penicillium digitatum PHI26]
Length = 627
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 76/170 (44%), Gaps = 15/170 (8%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
VD+ PPCQ ++ P D + + ++ +P+ + ME + + +
Sbjct: 385 VDIAHCSPPCQT---WSPAHTVPCPRDDANSACVFSAGSLIRESRPRVLTMEETMGLPQR 441
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
+ R L +++ Y VR ++ YG+PQ R R+ L A P E LP YA PTH V
Sbjct: 442 FPVIFNRVVL-DMVEFGYSVRWSVLGCDEYGVPQERKRLLLIAAGPGEVLPHYAQPTHGV 500
Query: 643 VLRGVIPTEFERNTV------AYDEGQQAELARKLLLQDAISDLPSVDNY 686
G++P E +T+ A D + LAR A+S PS + +
Sbjct: 501 PGHGLLPRETISSTIDNIPPDADDHNVEGALARW-----ALSHRPSFNRH 545
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 6/59 (10%)
Query: 343 DLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLT 401
D Y G G G+ GA AG+ L +WAVDI+++A ++ +LN E EV + FLT
Sbjct: 325 DAYCGAG----GVSCGAKQAGVKL--QWAVDIDKHALETYQLNFHEVEVEHSDFFSFLT 377
>gi|423068121|ref|ZP_17056909.1| hypothetical protein HMPREF9682_00130 [Streptococcus intermedius
F0395]
gi|355367012|gb|EHG14725.1| hypothetical protein HMPREF9682_00130 [Streptococcus intermedius
F0395]
Length = 351
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 57/110 (51%), Gaps = 5/110 (4%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
++D I GGPPCQ S R NK D++ ++D +D KPKF + ENV ++
Sbjct: 42 ELDGIIGGPPCQAYSTIGRANNKSKKSTDKRIYLYKHYLDFLDKYKPKFFVFENVKGLLS 101
Query: 582 FAKGLLGRYALARLI----QMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQ 627
F K L G L ++I + Y+V ++ A YG+ Q R R+ L G +
Sbjct: 102 F-KDLSGELLLPKIICEFDKCGYEVDYQIVDASNYGVVQKRERLILVGHR 150
>gi|209523295|ref|ZP_03271851.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328]
gi|209496446|gb|EDZ96745.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328]
Length = 387
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 12/128 (9%)
Query: 500 CGEKIKEFVTHGFKSKILPLPGD--VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLI 557
CG+ ++E T +I L GD +++ICGGPPCQG S N D++N +
Sbjct: 56 CGD-LREISTE----QIRELIGDRHINLICGGPPCQGFSTIGSNNN-----LDKRNFLFL 105
Query: 558 VFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQF 617
F+ V+ LKP ++++ENV ++ L L + Y V + +++A YG+P+
Sbjct: 106 EFLRFVEQLKPDYIIIENVTGLLSRKNENTLTSILTCLQNIGYTVDVRVLSAHHYGVPEK 165
Query: 618 RMRVFLWG 625
R R G
Sbjct: 166 RRRTIFLG 173
>gi|242780736|ref|XP_002479658.1| C-5 cytosine methyltransferase DmtA [Talaromyces stipitatus ATCC
10500]
gi|218719805|gb|EED19224.1| C-5 cytosine methyltransferase DmtA [Talaromyces stipitatus ATCC
10500]
Length = 611
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 58/120 (48%), Gaps = 6/120 (5%)
Query: 523 VDVICGGPPCQGVS-GFNRFRNKDNPLADEKNKQLIV-FMDIVDFLKPKFVLMENVVDIV 580
VD+ PPCQ S R N+ DE+N LI +++ +KP+ +E +
Sbjct: 361 VDISHSSPPCQPFSPAHTRSYNQQR---DEENSSLIFSAFNMIQKVKPRIHTIEETFGVP 417
Query: 581 KFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTH 640
K R + +++ Y + +A YG+PQ R R+F+ A P EKLP + +PTH
Sbjct: 418 SRYKETFLR-MIQDFLELGYSIHSKTIACAKYGVPQLRRRLFIIAAGPGEKLPAFPVPTH 476
>gi|255946093|ref|XP_002563814.1| Pc20g13340 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211588549|emb|CAP86663.1| Pc20g13340 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 627
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 76/172 (44%), Gaps = 19/172 (11%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFM--DIVDFLKPKFVLMENVVDIV 580
VD+ PPCQ S + P A + VF ++ +P+ + ME + +
Sbjct: 385 VDIAHCSPPCQTWSPAHTV-----PCARDDANSACVFSAGSLIQESRPRVLTMEETMGLP 439
Query: 581 KFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTH 640
+ + R L +++ Y VR ++ YG+PQ R R+ L A P E LP YA PTH
Sbjct: 440 QRFPVIFNRVVL-DMVEFGYSVRWSVLGCDEYGVPQERKRLLLIAAGPGEVLPHYAQPTH 498
Query: 641 DVVLRGVIPTEFERNTV------AYDEGQQAELARKLLLQDAISDLPSVDNY 686
+ G++P E +T+ A D + L R A+S PS D +
Sbjct: 499 GMPGHGLLPRETISSTIDNIPPDADDHNVEGALERW-----ALSHRPSFDRH 545
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 6/59 (10%)
Query: 343 DLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLT 401
D Y G G G+ GA AGL L +WAVDI+++A ++ +LN + EV + FLT
Sbjct: 325 DAYCGAG----GVSCGAKQAGLKL--QWAVDIDKHALETYQLNFDDVEVEHSDFFSFLT 377
>gi|427722864|ref|YP_007070141.1| DNA-cytosine methyltransferase [Leptolyngbya sp. PCC 7376]
gi|427354584|gb|AFY37307.1| DNA-cytosine methyltransferase [Leptolyngbya sp. PCC 7376]
Length = 424
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 66/124 (53%), Gaps = 6/124 (4%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
++DV+ GGPPCQG S + RN ++P +N+ + ++ ++D L+PK+ + ENV +
Sbjct: 80 EIDVMVGGPPCQGFSMMGK-RNLNDP----RNRLIFEYVRLLDELQPKYFVFENVQGMAS 134
Query: 582 FAKGLLGRYALARLIQMNYQV-RMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTH 640
+ L++L + YQV ++ + YG PQ R R+ L G + K Y PTH
Sbjct: 135 GKHRDFLQRLLSKLAAVGYQVLEPRVINSADYGAPQNRNRLILLGYRQNVKPLEYPEPTH 194
Query: 641 DVVL 644
L
Sbjct: 195 GEFL 198
>gi|149373126|ref|ZP_01892014.1| DcmB [unidentified eubacterium SCB49]
gi|149354274|gb|EDM42843.1| DcmB [unidentified eubacterium SCB49]
Length = 349
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 74/162 (45%), Gaps = 24/162 (14%)
Query: 513 KSKILPLPGD----VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKP 568
K I+ +P D D I GGPPCQ S R + D++ + F+ I++ +P
Sbjct: 49 KRSIVNIPADEVPECDGIIGGPPCQSWSEAGAARG----IKDKRGQLFYDFIRILEAKQP 104
Query: 569 KFVLMENV--VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGA 626
KF L ENV + I K + L G L R + Y++ M+ A Y +PQ R RVF G
Sbjct: 105 KFFLAENVSGMLISKHTEALEGIKELFRNAGIGYELSFQMLNASDYNVPQDRKRVFFIGI 164
Query: 627 Q---------PTEKLPPYALPTHDVV---LRGVIPTEFERNT 656
+ PTE P +P DV+ GV+P NT
Sbjct: 165 RKDLNFKYQFPTETFP--KIPLEDVISDLQEGVLPALEYNNT 204
>gi|417321064|ref|ZP_12107604.1| putative C-5 cytosine-specific DNA methylase [Vibrio
parahaemolyticus 10329]
gi|328471744|gb|EGF42621.1| putative C-5 cytosine-specific DNA methylase [Vibrio
parahaemolyticus 10329]
Length = 392
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 61/120 (50%), Gaps = 6/120 (5%)
Query: 521 GDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIV 580
G++ +I GGPPCQG F+ R KD + D +NK L+ + D V PK L+ENV +
Sbjct: 76 GELSIILGGPPCQG---FSSHRIKDAGVDDPRNKLLLRYFDFVAAFYPKAFLVENVAGLF 132
Query: 581 -KFAKGLLGRYALARLIQMNYQVRM-GMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALP 638
+ K L R+ L NY++ + A YG+PQ R R F+ G + K+ P
Sbjct: 133 WERHKSYLTRF-LDLANANNYRIVFCNTLNAKDYGVPQNRKRAFILGIRDDVKIDKLVFP 191
>gi|433656500|ref|YP_007273879.1| DNA-cytosine methyltransferase( ) [Vibrio parahaemolyticus BB22OP]
gi|432507188|gb|AGB08705.1| DNA-cytosine methyltransferase( ) [Vibrio parahaemolyticus BB22OP]
Length = 392
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 61/120 (50%), Gaps = 6/120 (5%)
Query: 521 GDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIV 580
G++ +I GGPPCQG F+ R KD + D +NK L+ + D V PK L+ENV +
Sbjct: 76 GELSIILGGPPCQG---FSSHRIKDAGVDDPRNKLLLRYFDFVAAFYPKAFLVENVAGLF 132
Query: 581 -KFAKGLLGRYALARLIQMNYQVRM-GMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALP 638
+ K L R+ L NY++ + A YG+PQ R R F+ G + K+ P
Sbjct: 133 WERHKSYLTRF-LDLANANNYRIVFCNTLNAKDYGVPQNRKRAFILGIRDDVKIDKLVFP 191
>gi|291571391|dbj|BAI93663.1| cytosine-specific methyltransferase [Arthrospira platensis NIES-39]
Length = 390
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 12/128 (9%)
Query: 500 CGEKIKEFVTHGFKSKILPLPGD--VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLI 557
CG+ ++E T +I L GD +++ICGGPPCQG S N D++N +
Sbjct: 55 CGD-LREISTE----QIRELIGDRHINLICGGPPCQGFSTIGTNNN-----LDKRNFLFL 104
Query: 558 VFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQF 617
F+ V+ LKP ++++ENV ++ L L + Y V + +++A YG+P+
Sbjct: 105 EFLRFVEQLKPDYIIIENVTGLLSRKNENTLTSILTCLQNIGYTVDVRVLSAHHYGVPEK 164
Query: 618 RMRVFLWG 625
R R G
Sbjct: 165 RRRTIFLG 172
>gi|117620606|ref|YP_855619.1| modification methylase DdeI [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|117562013|gb|ABK38961.1| modification methylase DdeI [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length = 440
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 60/112 (53%), Gaps = 12/112 (10%)
Query: 519 LPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVD 578
L G VD+I GGPPCQG S + R+ D+P +NK ++D+V +KPK +L+ENV
Sbjct: 87 LAGKVDLIVGGPPCQGFSLAGK-RDPDDP----RNKLAEQYIDVVRLVKPKLLLLENVRG 141
Query: 579 I-VKFAKGL------LGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFL 623
KF KG + +L ++ Y V ++ + +G+PQ R R L
Sbjct: 142 FNTKFTKGRGEGSEPYSKIVKEKLEELGYGVSYKVITSSDWGVPQRRPRFIL 193
>gi|384937781|ref|ZP_10029476.1| modification methylase BepI-like protein [Mycoplasma canis UF31]
gi|384394394|gb|EIE40838.1| modification methylase BepI-like protein [Mycoplasma canis UF31]
Length = 416
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 96/230 (41%), Gaps = 51/230 (22%)
Query: 481 WRNYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVS---- 536
W NY +D +E + + +K H KI P ++DVI GG PCQ S
Sbjct: 73 WMNYMNPKDNIYKLESIIDLVKK------HNKGVKIFP--ENIDVITGGFPCQDFSVAGK 124
Query: 537 --GFNRFRNKDNP----LADEKNKQLIVFM-DIVDFLKPKFVLMENVVDIVKFAKGLLGR 589
GFN R+ +N E QL ++M ++V +KP + ENV KGL+
Sbjct: 125 REGFNSKRSHNNTKDFDQKTENRGQLYLWMKEVVGIVKPLVFIAENV-------KGLVNL 177
Query: 590 YALARLIQMNYQ---------VRMGMMAAGAYGLPQFRMRVFLWGAQPT----------- 629
++I+ ++ + ++ A YG+PQ R RVF +G + +
Sbjct: 178 KDTKKIIEKDFSNSANEEYIVIPAKVLQAANYGVPQSRERVFFYGFKKSALNYKAIEALN 237
Query: 630 -----EKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQ 674
+ PY PTH+ +R + T F A+ E + E + L Q
Sbjct: 238 NLENNDDYNPYPKPTHNFDIRNIKLTPFVTTDDAFIELLEPEKTKDLSQQ 287
>gi|448382790|ref|ZP_21562285.1| modification methylase XorII [Haloterrigena thermotolerans DSM
11522]
gi|445661259|gb|ELZ14050.1| modification methylase XorII [Haloterrigena thermotolerans DSM
11522]
Length = 361
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 24/208 (11%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
+VD++ GGPPCQG S + R+ D DE+N L+ + + + L P + +MENV ++
Sbjct: 73 EVDIVTGGPPCQGFSVMGK-RDPD----DERNNLLLKYAEHISGLSPDYFVMENVKGLMS 127
Query: 582 FAKGLLGRYALARLIQMNYQV--RMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPT 639
K L + Y + + ++ A +G+PQ+R RV + G + T P Y P
Sbjct: 128 GDKREFLEEFLNEIRSAGYNIVEPIQVLDAAEFGVPQYRERVIVLGYRDTCPKPSYPTPD 187
Query: 640 HDVV----LRGVIPTEFE--RNTVAYDE-GQQAELARKL--------LLQDAISDLPSVD 684
V G +P + N V E G Q++ +K+ + + I+ L VD
Sbjct: 188 DSNVNSWDAIGDLPNNLDDVENGVYKGELGPQSDYVKKINSWKQKASTIPEGITGLDPVD 247
Query: 685 NYESRDEIPYDREPET--EFQCFIRLRK 710
+ E D +P + E + RL+K
Sbjct: 248 HSERVRNRFADVDPGSNDEVSRYYRLKK 275
>gi|83859006|ref|ZP_00952527.1| C-5 cytosine-specific DNA methylase [Oceanicaulis sp. HTCC2633]
gi|83852453|gb|EAP90306.1| C-5 cytosine-specific DNA methylase [Oceanicaulis alexandrii
HTCC2633]
Length = 363
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 69/145 (47%), Gaps = 19/145 (13%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
L +PG V+ G PCQ S +N+ D+P K K L F D++D ++P V MENV
Sbjct: 83 LFIPGKRRVLVGCAPCQPFSTYNQ--KNDDP----KWKLLSYFGDLIDQVRPDVVSMENV 136
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
++ F +G + R + RL Y V ++ +GL Q R R+ L +Q + P A
Sbjct: 137 PRLLNFKEGAVFRQFVGRLEAAGYHVVWKVLYGPDFGLAQTRHRLVLLASQ----VGPIA 192
Query: 637 LPTHDVVLRGVIPTEFERNTVAYDE 661
LP +PT +R DE
Sbjct: 193 LP---------VPTHEDRPRTVRDE 208
>gi|282880843|ref|ZP_06289537.1| DNA (cytosine-5-)-methyltransferase [Prevotella timonensis CRIS
5C-B1]
gi|281305284|gb|EFA97350.1| DNA (cytosine-5-)-methyltransferase [Prevotella timonensis CRIS
5C-B1]
Length = 374
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 86/204 (42%), Gaps = 23/204 (11%)
Query: 487 SEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVS-GFNRFRNKD 545
+ED ++ + K E + K K+ D++V+ GGPPCQG S +R R
Sbjct: 49 NEDIRSFVDHFDDSISKATERLNSNCKEKLYQELNDINVVIGGPPCQGFSMAGSRIRKTS 108
Query: 546 NPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYAL------ARLIQMN 599
+ D +N + I+ +P++ + ENVV I+ G + +
Sbjct: 109 EFIDDSRNFLFRYYFKIIQKFEPQYFVFENVVGILSSKNGEILETIKSIFEDDSNFKNGR 168
Query: 600 YQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAY 659
Y + + + A YG+PQ R RV + G + + L ++R +PTE
Sbjct: 169 YYLHIKVFKAEEYGVPQQRRRVIILGTK-----FDFDLDRELKLMRESLPTEL------- 216
Query: 660 DEGQQAELARKLLLQDAISDLPSV 683
Q+ R+ ++DAI DL +
Sbjct: 217 ----QSVFNRRETIRDAIFDLKDI 236
>gi|417787172|ref|ZP_12434855.1| DNA-cytosine methyltransferase [Lactobacillus salivarius NIAS840]
gi|334307349|gb|EGL98335.1| DNA-cytosine methyltransferase [Lactobacillus salivarius NIAS840]
Length = 366
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 62/117 (52%), Gaps = 7/117 (5%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
+ +VI GGPPCQG S RN+D + D +N + +IV +KPK +MENV ++
Sbjct: 66 EAEVIIGGPPCQGFS-MAGARNRDGFMGDPRNYLFKHYFNIVKKVKPKVFIMENVKGLLS 124
Query: 582 FAKGLLGRYALA------RLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKL 632
+KG + R ++ RL +Y + ++ A +G+PQ R R+ + G E +
Sbjct: 125 MSKGEIFREIISIFSDKERLDGDSYTLYSRVVKAVEFGIPQKRERLIIVGVLNKENV 181
>gi|381179821|ref|ZP_09888668.1| DNA-cytosine methyltransferase [Treponema saccharophilum DSM 2985]
gi|380768299|gb|EIC02291.1| DNA-cytosine methyltransferase [Treponema saccharophilum DSM 2985]
Length = 415
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 60/111 (54%), Gaps = 6/111 (5%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP D D++CGGPPCQG S NR R D+P +N+ ++ ++ ++PKF +MENV
Sbjct: 105 LPRFKDADLVCGGPPCQGFSMANRQRIIDDP----RNQLYKEYLKLLSVVRPKFFIMENV 160
Query: 577 VDIVKFAKGLLGRYA--LARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWG 625
+ K + + + L + +YQ ++ A +G+PQ R R + G
Sbjct: 161 RGMSKKWEEIKENFETYLNANQKESYQFSSHLLYAEDFGVPQHRERFIVVG 211
>gi|2522459|gb|AAC45757.1| M.BssHII methylase [Geobacillus stearothermophilus]
Length = 375
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 58/117 (49%), Gaps = 4/117 (3%)
Query: 524 DVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFA 583
D++ GGPPCQ S + + ++P + + ++ ++ + P F +MENV ++
Sbjct: 237 DIVFGGPPCQAFSQAGKQKATNDP----RGNLIYEYLRFIEKINPPFFVMENVANLKGVQ 292
Query: 584 KGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTH 640
+G L + L R+ + Y V + + A YG PQ R R+ G + + +PTH
Sbjct: 293 RGELYQDILERMSNLGYNVTVAPLLAADYGAPQLRKRLIFLGCKKEFGVMELPVPTH 349
>gi|423486158|ref|ZP_17462840.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus BtB2-4]
gi|423491882|ref|ZP_17468526.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus CER057]
gi|423501326|ref|ZP_17477943.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus CER074]
gi|401153950|gb|EJQ61371.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus CER074]
gi|401158020|gb|EJQ65415.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus CER057]
gi|402439994|gb|EJV71991.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus BtB2-4]
Length = 357
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 5/103 (4%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D+I GGPPCQG S + RN++ DE+N ++ V F +PK ++ENV +
Sbjct: 75 IDLIIGGPPCQGFSLTGK-RNEN----DERNTLFEAMVNAVAFFQPKAFVLENVPGLATL 129
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWG 625
+G + + Y + ++ A YG+PQ R R+F G
Sbjct: 130 YQGKAKEAIMKEFETLGYTITYKVLYAPDYGIPQIRKRLFFVG 172
>gi|419703800|ref|ZP_14231353.1| modification methylase BepI-like protein [Mycoplasma canis PG 14]
gi|384394460|gb|EIE40903.1| modification methylase BepI-like protein [Mycoplasma canis PG 14]
Length = 416
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 86/203 (42%), Gaps = 51/203 (25%)
Query: 481 WRNYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVS---- 536
W NY +D +E + N +K H KI P ++DVI GG PCQ S
Sbjct: 73 WMNYMNPKDNIYKLESIVNLVKK------HNKGVKIFP--ENIDVITGGFPCQDFSVAGK 124
Query: 537 --GFNRFRNKDNP----LADEKNKQLIVFM-DIVDFLKPKFVLMENVVDIVKFAKGLLGR 589
GFN R+ +N E QL ++M ++V +KP + ENV KGL+
Sbjct: 125 REGFNSKRSHNNTKDFDQKTENRGQLYLWMKEVVGIVKPLVFIAENV-------KGLVNL 177
Query: 590 YALARLIQMNYQ---------VRMGMMAAGAYGLPQFRMRVFLWGAQPT----------- 629
++I+ ++ + ++ A YG+PQ R RVF +G + +
Sbjct: 178 KDAKKIIEKDFSNSANEEYIVIPAKVLQAANYGVPQSRERVFFYGFKKSALNYKTIEALN 237
Query: 630 -----EKLPPYALPTHDVVLRGV 647
+ PY PTH+ +R +
Sbjct: 238 NLENNDDYNPYPKPTHNFDIRNI 260
>gi|409993543|ref|ZP_11276681.1| cytosine-specific DNA methylase [Arthrospira platensis str. Paraca]
gi|79835459|gb|ABB52089.1| Mod [Arthrospira platensis]
gi|409935626|gb|EKN77152.1| cytosine-specific DNA methylase [Arthrospira platensis str. Paraca]
Length = 390
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 12/128 (9%)
Query: 500 CGEKIKEFVTHGFKSKILPLPGD--VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLI 557
CG+ ++E T +I L GD +++ICGGPPCQG S N D++N +
Sbjct: 55 CGD-LREISTE----QIRELIGDRHINLICGGPPCQGFSTIGTNNN-----LDKRNFLFL 104
Query: 558 VFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQF 617
F+ V+ LKP ++++ENV ++ L L + Y V + +++A YG+P+
Sbjct: 105 EFLRFVEQLKPDYIIIENVTGLLSRKNENTLTSILTCLQNIGYTVDVRVLSAHHYGVPEK 164
Query: 618 RMRVFLWG 625
R R G
Sbjct: 165 RRRTIFLG 172
>gi|423064852|ref|ZP_17053642.1| cytosine-specific DNA methylase [Arthrospira platensis C1]
gi|406714095|gb|EKD09263.1| cytosine-specific DNA methylase [Arthrospira platensis C1]
Length = 395
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 64/125 (51%), Gaps = 9/125 (7%)
Query: 500 CGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVF 559
CG+ + +F H + SKI V ++ GGPPCQG S K +P D +N F
Sbjct: 101 CGD-VNDFNPHQWLSKIGS--PSVHLVVGGPPCQGFS----VAGKRDP-NDPRNHLFQQF 152
Query: 560 MDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNY-QVRMGMMAAGAYGLPQFR 618
+ IV ++P +V+MENV I+ KG + + + + Y + + ++ + AYG+PQ R
Sbjct: 153 IRIVAEVRPWYVVMENVPGILTLKKGKIKQAIFSAFQAIGYTNISVAILESAAYGVPQIR 212
Query: 619 MRVFL 623
R
Sbjct: 213 PRAIF 217
>gi|389796771|ref|ZP_10199822.1| DNA-cytosine methyltransferase [Rhodanobacter sp. 116-2]
gi|388448296|gb|EIM04281.1| DNA-cytosine methyltransferase [Rhodanobacter sp. 116-2]
Length = 501
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 92/218 (42%), Gaps = 35/218 (16%)
Query: 524 DVICGGPPCQGVS--GFNRFRNKDNPL----ADEKNKQLIVFMDIVDFLKPKFVLMENVV 577
DV+ GGPPCQ + G + R DN D + + I ++ V+ P VL+ENV
Sbjct: 97 DVLVGGPPCQAFARVGRPKLREVDNHAEAFKHDPRAQLYIDYLRYVEAFAPLAVLVENVP 156
Query: 578 DIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQ---------- 627
D++ + L Y R ++ A YG+PQ R R+ L +
Sbjct: 157 DVLNHGGQNIAEEIAEVLENKGYICRYTLLNAAFYGVPQMRERMILIAYRREIADVVTFP 216
Query: 628 -PTE--KLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAE--LARKLLLQDAISDLPS 682
PT LPP T V L+ + +E + Y +A+ L + +DA+ DLP+
Sbjct: 217 DPTHFIHLPPGYEGTRSVALK-FLDSEIADDAHHYIHASKADSSLPPAVTAEDALDDLPA 275
Query: 683 VDNYE----------SR---DEIPYDREPETEFQCFIR 707
+D + +R D +PY + P T + +R
Sbjct: 276 IDARKLLKSGTLRRGARRFDDPVPYGKPPHTTYARLMR 313
>gi|376005611|ref|ZP_09783070.1| DNA (cytosine-5-)-methyltransferase [Arthrospira sp. PCC 8005]
gi|375326009|emb|CCE18823.1| DNA (cytosine-5-)-methyltransferase [Arthrospira sp. PCC 8005]
Length = 401
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 64/125 (51%), Gaps = 9/125 (7%)
Query: 500 CGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVF 559
CG+ + +F H + SKI V ++ GGPPCQG S K +P D +N F
Sbjct: 107 CGD-VNDFNPHQWLSKIGS--PSVHLVVGGPPCQGFS----VAGKRDP-NDPRNHLFQQF 158
Query: 560 MDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNY-QVRMGMMAAGAYGLPQFR 618
+ IV ++P +V+MENV I+ KG + + + + Y + + ++ + AYG+PQ R
Sbjct: 159 IRIVAEVRPWYVVMENVPGILTLKKGKIKQAIFSAFQAIGYTNISVAILESAAYGVPQIR 218
Query: 619 MRVFL 623
R
Sbjct: 219 PRAIF 223
>gi|308229522|gb|ADO24174.1| M.AclI [Acinetobacter calcoaceticus]
Length = 458
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 59/107 (55%), Gaps = 10/107 (9%)
Query: 521 GDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIV 580
G++D++ GGPPCQG S + R+K +D +NK ++D V KPK L+EN V ++
Sbjct: 188 GEIDIVIGGPPCQGFSLSGK-RDK----SDARNKLFENYLDFVTVFKPKIALLEN-VQLL 241
Query: 581 KFAKGLLGRYALARLIQ----MNYQVRMGMMAAGAYGLPQFRMRVFL 623
K G + +I+ +NY++ + A YG+PQ R RVF
Sbjct: 242 TSMKDENGNHIKDLIIKKFQDLNYKITYFDVNAKDYGVPQSRARVFF 288
>gi|399088671|ref|ZP_10753609.1| DNA-methyltransferase Dcm [Caulobacter sp. AP07]
gi|398030459|gb|EJL23871.1| DNA-methyltransferase Dcm [Caulobacter sp. AP07]
Length = 498
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 84/184 (45%), Gaps = 21/184 (11%)
Query: 519 LPGDVDVICGGPPCQGVSGFNRFRNK---DNPLA---DEKNKQLIVFMDIVDFLKPKFVL 572
L VDV+ GGPPCQ + R + + D+P A D + + ++ V +P +L
Sbjct: 103 LENSVDVLVGGPPCQAYARVGRAKLREVADHPQAFKVDPRGNLYLRYLTYVRAFRPLALL 162
Query: 573 MENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKL 632
+ENV DI+ +A + + L + Y ++ A +G+PQ R RVF+ + L
Sbjct: 163 IENVPDILHYAHHNVAEEIVEALEALGYVANYSLINAAFHGVPQMRDRVFIVAYRKELGL 222
Query: 633 P--------PYALP-----THDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISD 679
P + LP T V LR + E VA D G ++ L + DA+SD
Sbjct: 223 PIRFPKATHHFDLPVGYAGTRAVALR-YVNREGSAGYVAPDLGDES-LPFPVTATDALSD 280
Query: 680 LPSV 683
LP +
Sbjct: 281 LPPI 284
>gi|34451619|gb|AAQ72366.1| TspRI methylase [Thermus sp. R]
Length = 431
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 83/183 (45%), Gaps = 29/183 (15%)
Query: 525 VICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAK 584
V+ GG PCQ S NR RN ++P +N F+ + FL P +++ENV I A
Sbjct: 137 VVTGGVPCQRFSLTNRKRNDEDP----RNYLFREFIRLARFLDPDVLIVENVSGIRSAAN 192
Query: 585 GLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVL 644
G + + + Y+ + ++ A +G+PQ R R+F G +P + + PTH +
Sbjct: 193 GKFVLEIVRAMEEAGYRAHVEVLNAADFGVPQHRKRIFFVGVRPGIEF-RWPRPTHGPL- 250
Query: 645 RGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQC 704
G+ ++ + +AI DLP + ES E Y P+T++Q
Sbjct: 251 -----------------GEHPWVS----VWEAIGDLPPLGPGESAHE--YHLPPQTDYQR 287
Query: 705 FIR 707
+R
Sbjct: 288 RMR 290
>gi|315222621|ref|ZP_07864510.1| DNA (cytosine-5-)-methyltransferase [Streptococcus anginosus F0211]
gi|315188307|gb|EFU22033.1| DNA (cytosine-5-)-methyltransferase [Streptococcus anginosus F0211]
Length = 417
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 56/109 (51%), Gaps = 5/109 (4%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D I GGPPCQ S R NK D++ ++D +D KPKF + ENV ++ F
Sbjct: 109 LDGIIGGPPCQAYSTIGRANNKSKKSTDKRIYLYKHYLDFLDKYKPKFFVFENVKGLLSF 168
Query: 583 AKGLLGRYALARLI----QMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQ 627
K L G L ++I + Y+V ++ A YG+ Q R R+ L G +
Sbjct: 169 -KDLSGELLLPKIICEFDKCGYEVDYQIVDASNYGIVQKRERLILVGHR 216
>gi|326483421|gb|EGE07431.1| C-5 cytosine methyltransferase DmtA [Trichophyton equinum CBS
127.97]
Length = 584
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 77/185 (41%), Gaps = 41/185 (22%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQ-LIVFMDIVDFLKPKFVLMENVVDIVK 581
VDV+ PPCQ S DE N+ L +++ KP+ ME
Sbjct: 342 VDVMHVSPPCQPFSPAKTIAAAH----DEANEACLFSIYRLIELCKPRVATMEQT----- 392
Query: 582 FAKGLLGRYA------LARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPY 635
GL R+ + LI++ Y VR ++ YG+PQ R R+ L A P E+LPP+
Sbjct: 393 --SGLKQRHPVWLDAIIHSLIELGYSVRWRLVNCKDYGVPQSRCRLILIAAGPGEELPPF 450
Query: 636 ALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSV--DNYESRDEIP 693
PTH DE + L L DAI +PS D+ R E P
Sbjct: 451 PQPTHG------------------DEPGKRPLVTIL---DAIGSIPSTAPDHDLERAERP 489
Query: 694 YDREP 698
++R+P
Sbjct: 490 FERQP 494
>gi|119512221|ref|ZP_01631310.1| hypothetical protein N9414_08959 [Nodularia spumigena CCY9414]
gi|119463119|gb|EAW44067.1| hypothetical protein N9414_08959 [Nodularia spumigena CCY9414]
Length = 393
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
+V+V+ GGPPCQG S K +P D +N+ F+ +V ++P +V+MENV I+
Sbjct: 127 EVNVVVGGPPCQGFS----VAGKRDP-KDPRNRLFYEFVRVVSEIRPWYVVMENVPGILT 181
Query: 582 FAKGLLGRYALARLIQMNY-QVRMGMMAAGAYGLPQFRMRVFL 623
KG + + + Y + + ++ + AYG+PQ R R
Sbjct: 182 IQKGSVKTAIIEAFKSIGYPHISVAILESAAYGVPQIRPRAIF 224
>gi|393213319|gb|EJC98816.1| S-adenosyl-L-methionine-dependent methyltransferase [Fomitiporia
mediterranea MF3/22]
Length = 871
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 72/188 (38%), Gaps = 24/188 (12%)
Query: 517 LPLPG---DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLM 573
LP P ++D I G PCQ S NR+ D N+ + + V+ L PK+ L
Sbjct: 466 LPAPPQREEIDCIVSGFPCQPHSRMNRYPRA----TDLVNELYLTTISWVEHLCPKYCLF 521
Query: 574 ENVVDIVKFAKGLL---------------GRYALARLIQMNYQVRMGMMAAGAYGLPQFR 618
ENV ++ G + L + YQVR + A YG PQ R
Sbjct: 522 ENVPGFIQHRIGATQIDQHTIQGGIIQGGIKLTCRTLTALGYQVRFATLQAAHYGTPQRR 581
Query: 619 MRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELA--RKLLLQDA 676
R FLW A+ LP TH+ + VA + A + + DA
Sbjct: 582 KRFFLWAARTGLPLPDLPPRTHEFPATKSLAIRCSNGDVAGSVSCETGTAPMPMVTVADA 641
Query: 677 ISDLPSVD 684
ISDL D
Sbjct: 642 ISDLKRWD 649
>gi|313667096|gb|ADR72993.1| M1.BspMI [Bacillus sp. M(2010)]
Length = 348
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 62/116 (53%), Gaps = 7/116 (6%)
Query: 522 DVDVICGGPPCQGVSGFNR-----FRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
+VDV+ GGPPCQG S + + +P D +N + ++ ++ LKPK+++MENV
Sbjct: 70 EVDVLIGGPPCQGFSTIGKRVSSNLEKRSSP--DPRNGLIFQYIRLLKDLKPKYLVMENV 127
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKL 632
++ G A+ + ++ Y V ++ YG+PQ R RV + G + E++
Sbjct: 128 KGLLTMNGGGDLANAINLIQELGYNVAYKVLNMADYGVPQIRERVIIIGNRLGEEI 183
>gi|220903552|ref|YP_002478864.1| DNA-cytosine methyltransferase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219867851|gb|ACL48186.1| DNA-cytosine methyltransferase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 310
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 4/104 (3%)
Query: 524 DVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFA 583
+V+ GG PCQG S N R+ + DE+N I F+ IV L+P++ L ENV I+
Sbjct: 63 EVVVGGFPCQGFSQANLLRSGN----DERNSLYIEFLRIVSSLQPRYFLAENVRGILSLE 118
Query: 584 KGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQ 627
G + L Y+++ + +G+PQ R RV + G +
Sbjct: 119 GGSAIKKILGDFNNAGYRLKYKLFNVADFGVPQSRFRVIIAGTR 162
>gi|30523050|gb|AAP31838.1| AsiSI methylase [Arthrobacter sp. S]
Length = 390
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 57/118 (48%), Gaps = 4/118 (3%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+DV+ GGPPCQ S K L D + + F+ IVD ++PK V+ ENV +
Sbjct: 74 IDVLSGGPPCQPFS----IAGKRLGLDDPRGHLIAEFVRIVDEVRPKAVVFENVPALQTS 129
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTH 640
G + R L Q+ Y VR ++ A +G+PQ R R+ L + + PTH
Sbjct: 130 HNGDVVRATTDALEQLGYGVRRAILNAADWGVPQARKRLILIAVRDVAEFSFPPKPTH 187
>gi|407004442|gb|EKE20829.1| Cytosine-specific methyltransferase [uncultured bacterium]
Length = 373
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 82/185 (44%), Gaps = 29/185 (15%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
VD+I GGPPCQG S + R D+P +N F+++V +KPK ++ENV I+
Sbjct: 205 VDIIVGGPPCQGFSHAGK-RMIDDP----RNLLYKEFVNVVKKIKPKVFVLENVEGIMTI 259
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
G + ++ Y V + A +G+PQ R RV + G+
Sbjct: 260 NGGKTYEEVKSNFEELGYSVIGHKLHAVKFGVPQKRKRVIIIGS---------------- 303
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEF 702
L+G P F + YDE + Q+AI DL + + + + I +P F
Sbjct: 304 -LQGD-PETFFPKPLIYDE------KNYITTQNAIGDLFNTEVGDQYNPIKITTKPTHFF 355
Query: 703 QCFIR 707
Q F+R
Sbjct: 356 QKFVR 360
>gi|115386470|ref|XP_001209776.1| predicted protein [Aspergillus terreus NIH2624]
gi|114190774|gb|EAU32474.1| predicted protein [Aspergillus terreus NIH2624]
Length = 597
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 60/120 (50%), Gaps = 6/120 (5%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
VDV+ G PPCQ S + +D+ D + + V +++V LKP+ ME +
Sbjct: 356 VDVLHGSPPCQPFSPAHTRAGRDD---DANSACIFVSLNLVKKLKPRIYTMEETSGLAAQ 412
Query: 583 AKG--LLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTH 640
+ L R L +++ Y VR ++ YG+PQ R R+ + + P E+LPP PTH
Sbjct: 413 QQHSDTLCRVIL-DFLEVGYSVRWSILNCIDYGVPQSRKRLVVIASGPGERLPPLPRPTH 471
Score = 40.8 bits (94), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Query: 341 LLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFL 400
L D + G G G+ GA AGL+ WAVD++++A ++ LN P T+ FL
Sbjct: 294 LGDAFCGAG----GVSCGARKAGLH--NEWAVDVSQHALETYGLNFPTTDCWQADVNSFL 347
Query: 401 TLLREWEKL 409
+L ++ K+
Sbjct: 348 SLNHDYLKV 356
>gi|335437820|ref|ZP_08560578.1| site-specific DNA-methyltransferase (cytosine-specific)
[Halorhabdus tiamatea SARL4B]
gi|335438109|ref|ZP_08560859.1| site-specific DNA-methyltransferase (cytosine-specific)
[Halorhabdus tiamatea SARL4B]
gi|334892798|gb|EGM31025.1| site-specific DNA-methyltransferase (cytosine-specific)
[Halorhabdus tiamatea SARL4B]
gi|334893981|gb|EGM32189.1| site-specific DNA-methyltransferase (cytosine-specific)
[Halorhabdus tiamatea SARL4B]
Length = 373
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 85/185 (45%), Gaps = 35/185 (18%)
Query: 520 PGDVDVICGGPPCQGVSGFNRFRNKDNPLAD-EKNKQLIVFMDIVDFLKPKFVLMENVVD 578
P D+D++ G PPCQ ++ ++ PL D KNK L V++D++ + PK V+ ENV
Sbjct: 71 PEDIDLVIGCPPCQK---YSSLQDTTPPLDDGPKNKLLNVYIDLILKIAPKVVVFENVPG 127
Query: 579 IV-----KFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLP 633
++ ++ L RY L + NY + + YG+PQ R RV G Q
Sbjct: 128 LMSEKNEQYVDDL--RYHLRK---SNYGFDLKRLCTADYGVPQDRDRVIGIGIQ------ 176
Query: 634 PYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARK---LLLQDAISDLPSVDNYESRD 690
GV E + +QA+ K + DAI DLP ++ E+ D
Sbjct: 177 ------------GVSSEEVTLPEPTHAPPEQADSEGKEPYRTVGDAIGDLPPLEAGETHD 224
Query: 691 EIPYD 695
++P++
Sbjct: 225 DLPFN 229
>gi|420483743|ref|ZP_14982373.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-3]
gi|420514098|ref|ZP_15012571.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-3b]
gi|393102968|gb|EJC03532.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-3]
gi|393158561|gb|EJC58821.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-3b]
Length = 203
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 64/146 (43%), Gaps = 28/146 (19%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ I+D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRILDLVKPKIFVFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGA---------------- 626
KG L + + Y + ++ A YG+PQ R RV L GA
Sbjct: 121 QKGQLFQRICNAFKERGYILEHAILNALDYGVPQVRERVILVGALKRFKQKFHFPKPIKT 180
Query: 627 ---QPTEKLPPYALPTHDVVLRGVIP 649
QPT PPY +L VIP
Sbjct: 181 HFSQPTYIDPPYLF---YCLLLKVIP 203
>gi|157164649|ref|YP_001466261.1| two-component sensor [Campylobacter concisus 13826]
gi|112801493|gb|EAT98837.1| modification methylase HphIA (Cytosine-specificmethyltransferase
HphIA) (M.HphIA) (M.Hphi(C)) [Campylobacter concisus
13826]
Length = 489
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 56/103 (54%), Gaps = 9/103 (8%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
VD+I GGPPCQ S N+ R D+P +N F+ V+ LKPKF++MENV ++K
Sbjct: 185 VDMIIGGPPCQSFSSANQQRVIDDP----RNVLYKYFVKFVNDLKPKFIIMENVRGMLKV 240
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWG 625
A ++ + ++ Y + + A + +PQ R+R+ G
Sbjct: 241 ANQVVEDFD-----KIGYTAKYRLYDATNFSVPQKRIRLIYIG 278
>gi|386754006|ref|YP_006227224.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori Shi112]
gi|384560264|gb|AFI00731.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori Shi112]
Length = 188
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 55/109 (50%), Gaps = 6/109 (5%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ S + + DEK ++ ++D +KPK + ENVV ++
Sbjct: 67 IDILLGGPPCQSYSTLGKRK------MDEKANLFKEYLRLLDLVKPKMFVFENVVGLMSM 120
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEK 631
KG L + + Y + ++ A YG+PQ R RV L GA + K
Sbjct: 121 QKGQLFKRICNAFKERGYILEHAILNALDYGVPQIRERVILVGALKSFK 169
>gi|300868191|ref|ZP_07112823.1| Cytosine-specific methyltransferase [Oscillatoria sp. PCC 6506]
gi|300333815|emb|CBN58007.1| Cytosine-specific methyltransferase [Oscillatoria sp. PCC 6506]
Length = 395
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 66/142 (46%), Gaps = 26/142 (18%)
Query: 520 PGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDI 579
PG+VD++ GGPPCQ S K + D + + F+ IV+ ++P+F +MENV +
Sbjct: 88 PGEVDLVTGGPPCQPFS----TAGKRGSVGDPRGSLFMDFIRIVEEIQPRFFIMENVRGL 143
Query: 580 VKF---------------------AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFR 618
+ G + LA + ++ Y+V ++ A YG+PQ R
Sbjct: 144 LSAPIRHRPHEQRGINHPNLAPDEMAGAAMQVILAEIKRIGYEVVYDLLNAADYGVPQVR 203
Query: 619 MRVFLWGAQPTEKLPPYALPTH 640
RV G + ++ + LPTH
Sbjct: 204 ERVIFIGYKGSDSV-TLPLPTH 224
>gi|386284382|ref|ZP_10061604.1| modification methylase HaeIII [Sulfurovum sp. AR]
gi|385344667|gb|EIF51381.1| modification methylase HaeIII [Sulfurovum sp. AR]
Length = 409
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 92/196 (46%), Gaps = 35/196 (17%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
DVD+I GGPPCQ S + R+ + D +N ++ I++ +PKF + ENV ++
Sbjct: 98 DVDIIIGGPPCQSFSSQGKARDPHSMKCDPRNYLYESYLKILNHYRPKFFVFENVTGLL- 156
Query: 582 FAKGLLGRYALARL---IQMNYQV----RMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPP 634
+ + G+ + + ++ NY + ++ + +G+PQ R RV + G + + P
Sbjct: 157 -STEINGKKIIETIMKDMKKNYNIVEEKSEIVLNSSDFGIPQERKRVIIIGVRKDIDIHP 215
Query: 635 YALPTHDVVLRGVIPTEFERNTVAYDEGQQAELAR---KLLLQDAISDLPSVDNYESRDE 691
A+ Y++ AE+++ K+ +QDA++DLP + + D
Sbjct: 216 KAI---------------------YED--LAEISKNEPKVTVQDALADLPKLKAGQGEDC 252
Query: 692 IPYDREPETEFQCFIR 707
I + E E+ IR
Sbjct: 253 IDFIPEKTNEYLKKIR 268
>gi|258570503|ref|XP_002544055.1| predicted protein [Uncinocarpus reesii 1704]
gi|237904325|gb|EEP78726.1| predicted protein [Uncinocarpus reesii 1704]
Length = 571
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 80/170 (47%), Gaps = 15/170 (8%)
Query: 474 GLYLKVRWRNYGPSEDTWEPIEGLSNCGE--KIKEFVTHGFKSKILPLPGDVDVICGGPP 531
GLY++ + + DT+ + + GE ++ F+T+ K + VD++ PP
Sbjct: 293 GLYVRWGFDKCHKAMDTYR-LNFRTAVGETCEVAHFLTNDAKDIM------VDILHFSPP 345
Query: 532 CQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYA 591
CQ F+ + P + + +++ +KP+ ME + + K L YA
Sbjct: 346 CQT---FSSAKTVAAPTDNANEACIFSARELLLRVKPRIATMEETSGLQERHKEFL--YA 400
Query: 592 -LARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTH 640
+ I + Y +R ++ AYG+PQ R R+ + GA P E LPP+ PTH
Sbjct: 401 TILTFIDLGYSIRWKLLTCEAYGVPQQRKRLVIIGAGPGESLPPFPKPTH 450
>gi|281420197|ref|ZP_06251196.1| modification methylase HgiDII [Prevotella copri DSM 18205]
gi|281405692|gb|EFB36372.1| modification methylase HgiDII [Prevotella copri DSM 18205]
Length = 353
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 83/177 (46%), Gaps = 10/177 (5%)
Query: 521 GDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDI- 579
G++D++ GGPPCQG S + DE+N + ++ V ++PK ++ENV I
Sbjct: 76 GELDLLAGGPPCQGFS-----VQRIGADLDERNHLVEEYISKVIAIRPKMFILENVPGIE 130
Query: 580 VKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPT 639
K K +L AL ++ + Y + ++ A YG+PQ R RV + G + K+P + P
Sbjct: 131 GKRGKNIL-HSALEKVEKSGYFIHEKILDAQDYGVPQRRKRVVIVGERKDHKIPLFEYPK 189
Query: 640 ---HDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIP 693
H + +R I E D + R L I+ L ++ + RD +P
Sbjct: 190 PQEHKITVREAIAYLPEPPEDGSDHPHISLHRRDRLSAKNIARLQALKPGQGRDFLP 246
>gi|383935270|ref|ZP_09988707.1| DNA (cytosine-5-)-methyltransferase [Rheinheimera nanhaiensis
E407-8]
gi|383703686|dbj|GAB58798.1| DNA (cytosine-5-)-methyltransferase [Rheinheimera nanhaiensis
E407-8]
Length = 473
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 60/140 (42%), Gaps = 26/140 (18%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
D+D+I GGPPCQ S K D++ + F+D+ LKPK+ ++ENV ++
Sbjct: 140 DIDLIVGGPPCQAFST----AGKRKGFNDDRGNVFLKFLDLCLQLKPKYFVIENVRGLLS 195
Query: 582 F---------------------AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMR 620
KG + L RL Y + A +G PQ R R
Sbjct: 196 CPLEHRPHYKRGEGYTELDEDELKGGALNFILKRLESSGYGFSFNLYNAANFGTPQIRER 255
Query: 621 VFLWGAQPTEKLPPYALPTH 640
V + ++ K PPY +PTH
Sbjct: 256 VIIICSR-DRKRPPYLVPTH 274
>gi|376001427|ref|ZP_09779297.1| DNA (cytosine-5-)-methyltransferase [Arthrospira sp. PCC 8005]
gi|375330256|emb|CCE15050.1| DNA (cytosine-5-)-methyltransferase [Arthrospira sp. PCC 8005]
Length = 387
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 65/128 (50%), Gaps = 12/128 (9%)
Query: 500 CGEKIKEFVTHGFKSKILPLPGD--VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLI 557
CG+ ++E T +I L GD +++ICGGPPCQG S N D++N +
Sbjct: 56 CGD-LREISTE----QIRELIGDRHINLICGGPPCQGFSTIGSNNN-----LDKRNFLFL 105
Query: 558 VFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQF 617
F+ V+ L+P ++++ENV ++ L L + Y V + +++A YG+P+
Sbjct: 106 EFLRFVEQLQPDYIIIENVTGLLSRKNENTLTSILTCLQNIGYTVDVRVLSAHHYGVPEK 165
Query: 618 RMRVFLWG 625
R R G
Sbjct: 166 RRRTIFLG 173
>gi|212526390|ref|XP_002143352.1| C-5 cytosine methyltransferase DmtA [Talaromyces marneffei ATCC
18224]
gi|210072750|gb|EEA26837.1| C-5 cytosine methyltransferase DmtA [Talaromyces marneffei ATCC
18224]
Length = 604
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 78/186 (41%), Gaps = 38/186 (20%)
Query: 521 GDVDVICGGPPCQGVS-GFNRFRNKDNPLADEKNKQLIV-FMDIVDFLKPKFVLMENVVD 578
VD+ PPCQ S R N+ DE+N LI ++V +KP+ +E
Sbjct: 360 AQVDISHSSPPCQPFSPAHTRSYNQQR---DEENSSLIFSAFNMVQKVKPRVHTIEETFG 416
Query: 579 IVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALP 638
+ K R + +++ Y + +A YG+PQ R R+F+ A P E+LP + P
Sbjct: 417 VPSRHKETFLR-MIQDFLELGYSIHSKTIACAQYGVPQMRRRLFIIAAGPGERLPTFPTP 475
Query: 639 THDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSV-DNY--------ESR 689
TH +L + ++DAIS++P + DN+ + R
Sbjct: 476 THG-----------------------PDLLPYVTIKDAISNIPRLADNHGPDNVAFQDGR 512
Query: 690 DEIPYD 695
PYD
Sbjct: 513 TRAPYD 518
>gi|183602700|ref|ZP_02964064.1| site-specific DNA-methyltransferase [Bifidobacterium animalis
subsp. lactis HN019]
gi|219682526|ref|YP_002468909.1| modification methylase SinI [Bifidobacterium animalis subsp. lactis
AD011]
gi|241190098|ref|YP_002967492.1| site-specific DNA-methyltransferase [Bifidobacterium animalis
subsp. lactis Bl-04]
gi|241195504|ref|YP_002969059.1| site-specific DNA-methyltransferase [Bifidobacterium animalis
subsp. lactis DSM 10140]
gi|384194654|ref|YP_005580399.1| site-specific DNA-methyltransferase [Bifidobacterium animalis
subsp. lactis V9]
gi|387819961|ref|YP_006300004.1| DNA-cytosine methyltransferase [Bifidobacterium animalis subsp.
lactis B420]
gi|452892171|ref|YP_005578846.2| DNA-cytosine methyltransferase [Bifidobacterium animalis subsp.
lactis BLC1]
gi|183218118|gb|EDT88765.1| site-specific DNA-methyltransferase [Bifidobacterium animalis
subsp. lactis HN019]
gi|219620176|gb|ACL28333.1| modification methylase SinI [Bifidobacterium animalis subsp. lactis
AD011]
gi|240248490|gb|ACS45430.1| site-specific DNA-methyltransferase [Bifidobacterium animalis
subsp. lactis Bl-04]
gi|240250058|gb|ACS46997.1| site-specific DNA-methyltransferase [Bifidobacterium animalis
subsp. lactis DSM 10140]
gi|295793085|gb|ADG32620.1| site-specific DNA-methyltransferase [Bifidobacterium animalis
subsp. lactis V9]
gi|386652662|gb|AFJ15792.1| DNA-cytosine methyltransferase [Bifidobacterium animalis subsp.
lactis B420]
gi|447219165|gb|AEN75813.2| DNA-cytosine methyltransferase [Bifidobacterium animalis subsp.
lactis BLC1]
Length = 453
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 66/134 (49%), Gaps = 15/134 (11%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
+P ++DV+ GGPPCQ S R ++P + + ++D+ LKP+++++ENV
Sbjct: 138 IPQGREIDVMFGGPPCQAFSTAGARRAFEDP----RGNVFLRYLDLASELKPRYLVIENV 193
Query: 577 VDIV----------KFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGA 626
++ K +G + RY L +L +M Y V + A +G Q R RV +
Sbjct: 194 RGLLSTPFPVESGGKPIRGGVMRYILNKLEEMGYGVSFNLYNAANFGAAQIRERVVIIAK 253
Query: 627 QPTEKLPPYALPTH 640
+ K + +PTH
Sbjct: 254 RDGTKC-DWLIPTH 266
>gi|449106429|ref|ZP_21743095.1| DNA (cytosine-5-)-methyltransferase [Treponema denticola ASLM]
gi|449117489|ref|ZP_21753906.1| DNA (cytosine-5-)-methyltransferase [Treponema denticola H-22]
gi|451968138|ref|ZP_21921367.1| DNA (cytosine-5-)-methyltransferase [Treponema denticola US-Trep]
gi|448950690|gb|EMB31511.1| DNA (cytosine-5-)-methyltransferase [Treponema denticola H-22]
gi|448964942|gb|EMB45608.1| DNA (cytosine-5-)-methyltransferase [Treponema denticola ASLM]
gi|451703095|gb|EMD57477.1| DNA (cytosine-5-)-methyltransferase [Treponema denticola US-Trep]
Length = 413
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 65/127 (51%), Gaps = 12/127 (9%)
Query: 508 VTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLK 567
+ +K+++ G +D++ GGPPCQG S + R K+ D +N + +++ + ++
Sbjct: 71 ILKNYKNQLNEFRGKIDLVVGGPPCQGFSTAGK-RVKE----DVRNNLVFSYIEFIKLIE 125
Query: 568 PKFVLMENVVDIV-KFAKGL------LGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMR 620
PK +L ENV F K + + + LI +NY++ ++ YG+PQ R R
Sbjct: 126 PKMILFENVKGFTYAFEKKIDEASIPYSKKVIDALIDLNYKIEAYIIDFSEYGIPQRRNR 185
Query: 621 VFLWGAQ 627
L G++
Sbjct: 186 FILIGSK 192
>gi|119511191|ref|ZP_01630308.1| C-5 cytosine-specific DNA methylase [Nodularia spumigena CCY9414]
gi|119464179|gb|EAW45099.1| C-5 cytosine-specific DNA methylase [Nodularia spumigena CCY9414]
Length = 432
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 72/167 (43%), Gaps = 20/167 (11%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
++DV+ GGPPCQG S + D +N + ++ +V L PKF ++ENV +
Sbjct: 75 EIDVVFGGPPCQGFSLIGK-----RSFEDPRNSLVFHYIRLVLELSPKFFVIENVKGMTA 129
Query: 582 FAKGLLGRYALARLIQMNYQVRMG--MMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPT 639
+ + Y+VR ++ A +G+PQ R R+F+ G + +LP Y
Sbjct: 130 GNHQAFIAEIINKFASNGYKVRQKYQVLNAAHFGVPQNRERLFILGCRNDLELPNY---- 185
Query: 640 HDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNY 686
P + G EL + +A+ DLP ++ Y
Sbjct: 186 ---------PEAITQRAKPKKSGLPHELNLSPTVWEALQDLPEIEKY 223
>gi|443313511|ref|ZP_21043122.1| DNA-methyltransferase Dcm [Synechocystis sp. PCC 7509]
gi|442776454|gb|ELR86736.1| DNA-methyltransferase Dcm [Synechocystis sp. PCC 7509]
Length = 410
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 76/175 (43%), Gaps = 36/175 (20%)
Query: 521 GDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIV 580
G +D++ GGPPCQG S + + D++N ++ F +V L P++ +MENV +V
Sbjct: 71 GQIDLVFGGPPCQGFSIMGK-----RLINDDRNHLVLEFCRLVIELNPRYFVMENVPGMV 125
Query: 581 KFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTH 640
+ Y + ++ A +G+PQ R R+F GAQ
Sbjct: 126 TGKHKTWLNKLKNKFKLHGYHGKAQILNAADFGVPQRRKRLFFCGAQAG----------- 174
Query: 641 DVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNY---ESRDEI 692
+R P E N V + DAI+DLP +D++ ++ DE+
Sbjct: 175 ---IRVYFPKTLEGNNVK--------------VVDAIADLPDLDSFAELKTTDEV 212
>gi|167854495|ref|ZP_02477276.1| cyclic 3',5'-adenosine monophosphate phosphodiesterase [Haemophilus
parasuis 29755]
gi|219872138|ref|YP_002476513.1| DNA-cytosine methyltransferase/C-5 cytosine-specific DNA methylase
[Haemophilus parasuis SH0165]
gi|167854250|gb|EDS25483.1| cyclic 3',5'-adenosine monophosphate phosphodiesterase [Haemophilus
parasuis 29755]
gi|219692342|gb|ACL33565.1| DNA-cytosine methyltransferase/C-5 cytosine-specific DNA methylase
[Haemophilus parasuis SH0165]
Length = 320
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 54/106 (50%), Gaps = 4/106 (3%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
+ DV+ GG PCQ S K LA E+ + +D+VD +KPK L ENV ++
Sbjct: 77 EADVVLGGFPCQDFS----LAGKRQGLAVERGNLYLSMVDVVDKVKPKLFLAENVKGLLT 132
Query: 582 FAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQ 627
+ GL + ++ Y+++ ++ YG+PQ R RV + G +
Sbjct: 133 WQNGLAINTIVEDFGKIGYKIKYQLLNTANYGVPQTRERVIIVGVR 178
>gi|317148994|ref|XP_001823049.2| C-5 cytosine methyltransferase DmtA [Aspergillus oryzae RIB40]
Length = 614
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 60/128 (46%), Gaps = 5/128 (3%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
VDV PPCQ S + ++ D + + D++ KP+ ME ++
Sbjct: 380 VDVSHSSPPCQTWSSAHTIEGAND---DANSACVFSSADLIRRAKPRVHTMEETNGLLDR 436
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDV 642
+ L R + I++ Y VR G++ YG+PQ R R+ + + P E LPP+ PTH
Sbjct: 437 HRDTLHR-VINDFIEIGYSVRWGILRLLEYGVPQTRKRLLVIASGPGETLPPFPRPTHGP 495
Query: 643 VLRGVIPT 650
L G PT
Sbjct: 496 GL-GEYPT 502
>gi|354566259|ref|ZP_08985432.1| DNA-cytosine methyltransferase [Fischerella sp. JSC-11]
gi|353546767|gb|EHC16215.1| DNA-cytosine methyltransferase [Fischerella sp. JSC-11]
Length = 424
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 66/123 (53%), Gaps = 21/123 (17%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
++DV+ GG PCQG S R L D +N + F+ IV LKP + + ENV
Sbjct: 76 EIDVVFGGSPCQGYSYMGR-----RALDDPRNFLVKDFIRIVLELKPSYFVFENV----- 125
Query: 582 FAKGL-LGRYA--LARLIQM----NYQVRM--GMMAAGAYGLPQFRMRVFLWGAQPTEKL 632
KGL +G++ L LI+ NYQ+R+ ++ A YG+PQ R R+F+ GA+ L
Sbjct: 126 --KGLTIGKHKCFLYELIETFSNNNYQIRLPWKVLNAAYYGIPQNRERLFIIGAKKGFVL 183
Query: 633 PPY 635
P Y
Sbjct: 184 PEY 186
>gi|238922582|ref|YP_002936095.1| cytosine-specific methyltransferase [Eubacterium rectale ATCC
33656]
gi|238874254|gb|ACR73961.1| cytosine-specific methyltransferase [Eubacterium rectale ATCC
33656]
Length = 443
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 92/208 (44%), Gaps = 30/208 (14%)
Query: 525 VICGGPPCQGVS--GFNRFRNKDNPLADEKNKQLIVFMDIVDF---LKPKFVLMENVVDI 579
++ GGPPCQ S G + R+ + K+ + ++ D + F L+ + V+MENV +
Sbjct: 77 IVIGGPPCQAYSMAGRGKLRSLGEDRVNIKDARGYLYQDFLRFVFELEARAVVMENVPES 136
Query: 580 VKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTE----KLPPY 635
F + L + Y+ ++ + YG+PQ R RVF+ + E KLP
Sbjct: 137 TNFGGKNIPEIVCTELTKKGYKAYWTILNSADYGVPQVRERVFVVAIKGDEGKEIKLPN- 195
Query: 636 ALPTH----DVVLRGVIPTEFERNTVAYDE--GQQAELARKLLLQDAISDLPSVDNYESR 689
PTH DV+ + E + + E G EL + + DA SDLP V + +
Sbjct: 196 --PTHRNEVDVLTQHQKRFEGYKQCQFFVEPNGTTDELKPWVTVGDAFSDLPEV--FPTA 251
Query: 690 D----------EIPYDREPETEFQCFIR 707
D E PY E + E+Q +R
Sbjct: 252 DSKYKLVSLNIEYPYKTEAQNEYQELMR 279
>gi|374704182|ref|ZP_09711052.1| cytosine-specific methyltransferase [Pseudomonas sp. S9]
Length = 449
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 69/136 (50%), Gaps = 22/136 (16%)
Query: 521 GDVDVICGGPPCQGVSGFNR-----------FRNKDNPLADEKNKQLIVFMDIVDFLKPK 569
G++D + GGPPCQG S R F D +N ++ ++++ + LKPK
Sbjct: 82 GELDCMIGGPPCQGFSQLRRSEQLNKGKIVKFSGYSQLAHDPRNDLVLRYLEVAEALKPK 141
Query: 570 FVLMENVVDIVKFA-KGLLGRYA--LARLIQ--MNYQVRMGMMAAGAYGLPQFRMR-VFL 623
F+++ENV ++ G LG+ + + +++ + Y V + ++ YG+PQ R R VF+
Sbjct: 142 FLVIENVPQMLNHGFDGRLGKLSETVINILERDLGYNVEVAILNCADYGVPQLRERAVFI 201
Query: 624 WGAQPTEKLPPYALPT 639
+ P +LPT
Sbjct: 202 -----ASSIGPASLPT 212
>gi|83771786|dbj|BAE61916.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 586
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 4/118 (3%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
VDV PPCQ S + ++ D + + D++ KP+ ME ++
Sbjct: 380 VDVSHSSPPCQTWSSAHTIEGAND---DANSACVFSSADLIRRAKPRVHTMEETNGLLDR 436
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTH 640
+ L R + I++ Y VR G++ YG+PQ R R+ + + P E LPP+ PTH
Sbjct: 437 HRDTLHR-VINDFIEIGYSVRWGILRLLEYGVPQTRKRLLVIASGPGETLPPFPRPTH 493
>gi|391871281|gb|EIT80441.1| hypothetical protein Ao3042_02785 [Aspergillus oryzae 3.042]
Length = 586
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 4/118 (3%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
VDV PPCQ S + ++ D + + D++ KP+ ME ++
Sbjct: 380 VDVSHSSPPCQTWSSAHTIEGAND---DANSACVFSSADLIRRAKPRVHTMEETNGLLDR 436
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTH 640
+ L R + I++ Y VR G++ YG+PQ R R+ + + P E LPP+ PTH
Sbjct: 437 HRDTLHR-VINDFIEIGYSVRWGILRLLEYGVPQTRKRLLVIASGPGETLPPFPRPTH 493
>gi|423678621|ref|ZP_17653497.1| site-specific DNA-methyltransferase [Bifidobacterium animalis
subsp. lactis BS 01]
gi|366041810|gb|EHN18291.1| site-specific DNA-methyltransferase [Bifidobacterium animalis
subsp. lactis BS 01]
Length = 436
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 66/134 (49%), Gaps = 15/134 (11%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
+P ++DV+ GGPPCQ S R ++P + + ++D+ LKP+++++ENV
Sbjct: 121 IPQGREIDVMFGGPPCQAFSTAGARRAFEDP----RGNVFLRYLDLASELKPRYLVIENV 176
Query: 577 VDIV----------KFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGA 626
++ K +G + RY L +L +M Y V + A +G Q R RV +
Sbjct: 177 RGLLSTPFPVESGGKPIRGGVMRYILNKLEEMGYGVSFNLYNAANFGAAQIRERVVIIAK 236
Query: 627 QPTEKLPPYALPTH 640
+ K + +PTH
Sbjct: 237 RDGTKC-DWLIPTH 249
>gi|254412384|ref|ZP_05026158.1| C-5 cytosine-specific DNA methylase superfamily [Coleofasciculus
chthonoplastes PCC 7420]
gi|196180694|gb|EDX75684.1| C-5 cytosine-specific DNA methylase superfamily [Coleofasciculus
chthonoplastes PCC 7420]
Length = 221
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 66/128 (51%), Gaps = 14/128 (10%)
Query: 520 PGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDI 579
PGD+D++ GG PCQ S K L DE+ L F+ + + +PKF+++E V I
Sbjct: 73 PGDLDLLFGGSPCQSFSQ----AGKRGSLNDERGLLLFEFVRLAKYFQPKFIVIEQVKGI 128
Query: 580 V----KFAK-GLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGA--QPTEKL 632
+ K K G + +L ++ Y+ R ++ + YG+ Q R RVF+ +P+ +
Sbjct: 129 LNAPDKSGKNGGVFESLKNKLEELGYRFRQQILNSADYGVAQLRERVFIVATRIKPSFRF 188
Query: 633 PPYALPTH 640
P LPTH
Sbjct: 189 P---LPTH 193
>gi|291539766|emb|CBL12877.1| DNA-methyltransferase (dcm) [Roseburia intestinalis XB6B4]
Length = 366
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 59/103 (57%), Gaps = 5/103 (4%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+DV+ GGPPCQG F+ +D + D++N + +++ D +KP+ V++ENV +++
Sbjct: 76 LDVLVGGPPCQG---FSIAGPRD--MNDKRNSLYLAMVELADRIKPQAVVLENVPGMLQT 130
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWG 625
G+ R + ++ Y + ++ A YG+PQ R RVF G
Sbjct: 131 NGGIGARRIVEDFKKIGYVMIPKLLYAPDYGIPQMRKRVFFVG 173
>gi|432343044|ref|ZP_19592255.1| DNA-cytosine methyltransferase [Rhodococcus wratislaviensis IFP
2016]
gi|430771931|gb|ELB87748.1| DNA-cytosine methyltransferase [Rhodococcus wratislaviensis IFP
2016]
Length = 350
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 74/165 (44%), Gaps = 33/165 (20%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
D DVI GGPPCQG S R++D+ + N+ ++ V +KPK ++ENV + +
Sbjct: 65 DADVILGGPPCQGFSPLG--RDRDDESRAQLNELWQHYLRAVRQVKPKAFVIENVPEFQR 122
Query: 582 FAKGLLGRYALARLIQM--------NYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLP 633
A+ ARL+++ Y+ G++ A YG+PQ R R + +K+P
Sbjct: 123 SAQ-------FARLLELMETDRELKKYRFAYGVLNAADYGVPQRRRRGIFMAVRGRKKVP 175
Query: 634 PYALPT--------------HDVVLRGVIPTEFERNTVAYDEGQQ 664
PT HD + G IP R V +GQQ
Sbjct: 176 WPPAPTHGPDSVSATEYVTVHDAI--GDIPLATARTEVEVVDGQQ 218
>gi|384190309|ref|YP_005576057.1| DNA-cytosine methyltransferase [Bifidobacterium animalis subsp.
lactis BB-12]
gi|384191445|ref|YP_005577192.1| DNA (cytosine-5-)-methyltransferase [Bifidobacterium animalis
subsp. lactis CNCM I-2494]
gi|289177801|gb|ADC85047.1| DNA-cytosine methyltransferase [Bifidobacterium animalis subsp.
lactis BB-12]
gi|340364182|gb|AEK29473.1| DNA (cytosine-5-)-methyltransferase [Bifidobacterium animalis
subsp. lactis CNCM I-2494]
Length = 513
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 66/134 (49%), Gaps = 15/134 (11%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
+P ++DV+ GGPPCQ S R ++P + + ++D+ LKP+++++ENV
Sbjct: 198 IPQGREIDVMFGGPPCQAFSTAGARRAFEDP----RGNVFLRYLDLASELKPRYLVIENV 253
Query: 577 VDIV----------KFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGA 626
++ K +G + RY L +L +M Y V + A +G Q R RV +
Sbjct: 254 RGLLSTPFPVESGGKPIRGGVMRYILNKLEEMGYGVSFNLYNAANFGAAQIRERVVIIAK 313
Query: 627 QPTEKLPPYALPTH 640
+ K + +PTH
Sbjct: 314 RDGTKC-DWLIPTH 326
>gi|425457191|ref|ZP_18836897.1| Modification methylase DdeI (fragment) [Microcystis aeruginosa PCC
9807]
gi|389801524|emb|CCI19317.1| Modification methylase DdeI (fragment) [Microcystis aeruginosa PCC
9807]
Length = 249
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 88/185 (47%), Gaps = 23/185 (12%)
Query: 524 DVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFA 583
D+I GGPPCQG S KD D +N + F V++L+P +MENV
Sbjct: 75 DLIIGGPPCQGFS-IAGPAQKDP--KDPRNSLFVDFARWVEYLQPTAFVMENV------- 124
Query: 584 KGLLGRYALAR-----LIQ-----MNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLP 633
KGLL R A +IQ + Y V + ++ A +G+PQ R R+F+ G
Sbjct: 125 KGLLSRKNAAHERVIDIIQNTFENIGYSVELWVLNAANFGVPQTRERIFIVGNNLGIDKI 184
Query: 634 PYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIP 693
H++ + G P + E+ + ++ +G+ + L + L DAISDLP++ E +
Sbjct: 185 GEPQINHNLDITGY-PEQNEQLS-SFPKGEFS-LVPAITLWDAISDLPNLQASEGCEVQA 241
Query: 694 YDREP 698
Y P
Sbjct: 242 YLHRP 246
>gi|359792942|ref|ZP_09295731.1| DNA-cytosine methyltransferase [Mesorhizobium alhagi CCNWXJ12-2]
gi|359250923|gb|EHK54346.1| DNA-cytosine methyltransferase [Mesorhizobium alhagi CCNWXJ12-2]
Length = 340
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 88/190 (46%), Gaps = 27/190 (14%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D++ GGPPCQ GF++ +D L+D +N F+ I +K + +MENV ++V
Sbjct: 24 IDIVYGGPPCQ---GFSQIGPRD--LSDPRNALYKEFVRICRTVKARAFVMENVPNMVAM 78
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMA--AGAYGLPQFRMRVFLWGAQPTEKLPPYALPTH 640
G L+ Y+ R ++ A +G+PQ R RVF++G + +K
Sbjct: 79 KNGHFKSKILSAFAAAGYR-RTAILPVLASDFGVPQDRRRVFIFGLRDDQKF-------- 129
Query: 641 DVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPET 700
+ A GQ+A + +++A+SDLP + + +PY R+P
Sbjct: 130 --------EGDIAEAAAALLNGQKASAV--VTVREALSDLPQKVSADD-GPLPYPRKPRN 178
Query: 701 EFQCFIRLRK 710
+ + +L +
Sbjct: 179 GYSAYQKLMR 188
>gi|387821614|ref|YP_006301563.1| DNA-cytosine methyltransferase [Bifidobacterium animalis subsp.
lactis Bi-07]
gi|386654222|gb|AFJ17351.1| DNA-cytosine methyltransferase [Bifidobacterium animalis subsp.
lactis Bi-07]
Length = 502
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 66/134 (49%), Gaps = 15/134 (11%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
+P ++DV+ GGPPCQ S R ++P + + ++D+ LKP+++++ENV
Sbjct: 187 IPQGREIDVMFGGPPCQAFSTAGARRAFEDP----RGNVFLRYLDLASELKPRYLVIENV 242
Query: 577 VDIV----------KFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGA 626
++ K +G + RY L +L +M Y V + A +G Q R RV +
Sbjct: 243 RGLLSTPFPVESGGKPIRGGVMRYILNKLEEMGYGVSFNLYNAANFGAAQIRERVVIIAK 302
Query: 627 QPTEKLPPYALPTH 640
+ K + +PTH
Sbjct: 303 RDGTKC-DWLIPTH 315
>gi|414072910|ref|ZP_11408819.1| DNA (cytosine-5-)-methyltransferase [Pseudoalteromonas sp.
Bsw20308]
gi|410804668|gb|EKS10724.1| DNA (cytosine-5-)-methyltransferase [Pseudoalteromonas sp.
Bsw20308]
Length = 392
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 70/158 (44%), Gaps = 31/158 (19%)
Query: 509 THGFKSKILPL------------PGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQL 556
TH + I+PL GD+D++ GGPPCQ GF+ R K D +N+ L
Sbjct: 53 THVYAEDIMPLNIDALMSEKGLKSGDLDLLLGGPPCQ---GFSTHRIKGRGEDDPRNQLL 109
Query: 557 IVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMG---MMAAGAYG 613
+ + D V+ L PK L+ENV ++ L L + Y+V G ++ A YG
Sbjct: 110 LRYFDFVEKLMPKAFLVENVPGLLWPRHALYLNKFLELANEKKYKVITGKPLIINARDYG 169
Query: 614 LPQFRMRVFL-------------WGAQPTEKLPPYALP 638
+PQ R R F+ W +PT P + P
Sbjct: 170 VPQSRRRAFILAVREDIDIENLEWPPKPTHIKPDFDKP 207
>gi|257464589|ref|ZP_05628960.1| putative 5-methylcytosine methyltransferase [Actinobacillus minor
202]
gi|257450249|gb|EEV24292.1| putative 5-methylcytosine methyltransferase [Actinobacillus minor
202]
Length = 331
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 5/119 (4%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIV-FMDIVDFLKPKFVLMENVVDIVK 581
VDV+ GGPPCQG S + AD+ L F+ +V +P+F +MENV +
Sbjct: 71 VDVVIGGPPCQGFSMAGKI---GRTFADDPRNHLFKEFVRVVKLTQPRFFVMENVARLFT 127
Query: 582 FAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTH 640
G + + YQV ++ A +G+PQ R R+ G + K+ + P+H
Sbjct: 128 HNSGRTRTEIIQHFESLGYQVECKVLNAADFGVPQLRSRIVFIGRKDKGKI-LFPEPSH 185
>gi|228473386|ref|ZP_04058140.1| Cytosine-specific methyltransferase HphIA [Capnocytophaga
gingivalis ATCC 33624]
gi|228275288|gb|EEK14086.1| Cytosine-specific methyltransferase HphIA [Capnocytophaga
gingivalis ATCC 33624]
Length = 358
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 75/173 (43%), Gaps = 34/173 (19%)
Query: 523 VDVICGGPPCQGVSGFN-RFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
V +I GGPPCQG S N R RN N E N + F+ V LKP + ++ENV +
Sbjct: 68 VFIIMGGPPCQGFSLSNTRTRNMQN----ENNFLFLEFVRFVQELKPTWFVLENVWGLTN 123
Query: 582 FAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHD 641
+G + Y+V ++ A YG+PQ R R F+ G + H
Sbjct: 124 MEEGKTKNMIEDCFRALGYEVNSQVLWASDYGVPQNRNRFFMVGNR------------HG 171
Query: 642 VVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPY 694
+ P FE +K+ +++AI DLP +DN E ++ Y
Sbjct: 172 IEFE--FPEPFE---------------KKITVEEAIGDLPDLDNGEMLEKGKY 207
>gi|2558956|gb|AAC49849.1| Masc1 [Ascobolus immersus]
Length = 537
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 5/119 (4%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNK-QLIVFMDIVDFLKPKFVLMENVVDIVK 581
VD++ PPCQ S + K+ DE N+ ++++ ++P+ +E I+
Sbjct: 292 VDILHLSPPCQTFSRAHTIAGKN----DENNEASFFAVVNLIKAVRPRLFTVEETDGIMD 347
Query: 582 FAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTH 640
AL + ++ Y R+ ++ A YG+ Q R R+ + GA P E+LPP+ LPTH
Sbjct: 348 RQSRQFIDTALMGITELGYSFRICVLNAIEYGVCQNRKRLIIIGAAPGEELPPFPLPTH 406
>gi|284159927|ref|YP_001060514.2| BsaWI methylase [Burkholderia pseudomallei 668]
gi|283775103|gb|ABN83996.2| BsaWI methylase [Burkholderia pseudomallei 668]
Length = 440
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 73/134 (54%), Gaps = 15/134 (11%)
Query: 513 KSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVL 572
+ ++ L G VD+I GGPPCQG S R +D ADE+NK + +++V+ ++P+ VL
Sbjct: 78 RRQLRALSGTVDLIVGGPPCQGFSVGGR---RDG--ADERNKLVFKMLELVELVRPRAVL 132
Query: 573 MENVVDIVK--FAK-GLLGRYALARLIQMNYQVRMG------MMAAGAYGLPQFRMRVFL 623
+ENV I + AK G +A L+ ++ R+G +++A +G+PQ R RV +
Sbjct: 133 IENVEGIARRFVAKPGHSQSAPVAELVIQEFE-RLGYVGTYTVVSAVDFGVPQTRRRVAI 191
Query: 624 WGAQPTEKLPPYAL 637
+ + L L
Sbjct: 192 LAVRDADGLSSAGL 205
>gi|386284381|ref|ZP_10061603.1| two-component sensor [Sulfurovum sp. AR]
gi|385344666|gb|EIF51380.1| two-component sensor [Sulfurovum sp. AR]
Length = 492
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 9/105 (8%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
D+DVI GGPPCQ S N+ R D+P +N ++ V+ ++PKFVLMENV ++K
Sbjct: 184 DIDVIIGGPPCQSFSSANQQRVIDDP----RNVLYTYYVKAVEKIQPKFVLMENVRGMIK 239
Query: 582 FAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGA 626
A ++ + ++ Y V + + + + Q R+R+ G
Sbjct: 240 VADQVVEDFN-----RIGYDVEYRLFDSSEFSVAQKRVRLLYIGV 279
>gi|328947595|ref|YP_004364932.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM 2489]
gi|328447919|gb|AEB13635.1| DNA-cytosine methyltransferase [Treponema succinifaciens DSM 2489]
Length = 476
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 66/140 (47%), Gaps = 25/140 (17%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
++D++ GGPPCQ S + + D++ + F+D + L+PKF ++ENV I+
Sbjct: 144 EIDLVIGGPPCQAFSTAGQRKG----FQDKRGNVFLTFIDRILELRPKFAVIENVRGILS 199
Query: 582 -------------FA-------KGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRV 621
FA KG Y L +L + Y V + A YG PQ R RV
Sbjct: 200 APFECEEMEKRFGFAPKTPEEKKGGALLYILNKLEEGGYTVTFNLYNAANYGAPQKRERV 259
Query: 622 FLWGAQPTEKLPPYALPTHD 641
+ ++ EK+ PY PT+D
Sbjct: 260 VFFCSRDGEKV-PYLPPTND 278
>gi|254456253|ref|ZP_05069682.1| Cytosine-specific methyltransferase HphIA [Candidatus Pelagibacter
sp. HTCC7211]
gi|207083255|gb|EDZ60681.1| Cytosine-specific methyltransferase HphIA [Candidatus Pelagibacter
sp. HTCC7211]
Length = 342
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 81/183 (44%), Gaps = 30/183 (16%)
Query: 524 DVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFA 583
D+I GPPCQG S RN D+P +NK + + + PK ++ENV +
Sbjct: 66 DIIIAGPPCQGFS-ITGPRNIDDP----RNKLYLSVFETLKLTNPKAFVVENVRGLKTMW 120
Query: 584 KGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVV 643
G + + + + Y V ++ + YG+PQ R RVF+ G
Sbjct: 121 GGNVFKEIIKKFESAGYIVTESLLNSADYGVPQIRHRVFIVG------------------ 162
Query: 644 LRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQ 703
++ + +FE +D+ + +AI +LPS++N E + Y+ +P T +Q
Sbjct: 163 IKKELNKKFEFPKPEFDKDDY------ITCGEAIGNLPSLENGELKSN-DYNEKPTTNYQ 215
Query: 704 CFI 706
++
Sbjct: 216 MYV 218
>gi|434394728|ref|YP_007129675.1| DNA-cytosine methyltransferase [Gloeocapsa sp. PCC 7428]
gi|428266569|gb|AFZ32515.1| DNA-cytosine methyltransferase [Gloeocapsa sp. PCC 7428]
Length = 372
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 68/133 (51%), Gaps = 17/133 (12%)
Query: 496 GLSNCGEKIKEFVT--HGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKN 553
G+ C + I E++ H FK +D++ GGPPCQG S K NP D +N
Sbjct: 51 GIIKCSD-INEYLIDIHRFKG--------IDLVFGGPPCQGFS----VAGKMNP-NDPRN 96
Query: 554 KQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLI-QMNYQVRMGMMAAGAY 612
+ L VFM V+ KP+ + ENV + F K R L + Q+ Y ++ ++ + +
Sbjct: 97 ELLWVFMKAVELTKPRAFICENVKALAVFDKWSKMRQRLFSVTSQLGYSYKLVVLNSSDF 156
Query: 613 GLPQFRMRVFLWG 625
G+PQ R R+FL G
Sbjct: 157 GVPQSRERMFLIG 169
>gi|218900599|ref|YP_002449010.1| modification methylase HaeIII [Bacillus cereus G9842]
gi|218543463|gb|ACK95857.1| modification methylase HaeIII [Bacillus cereus G9842]
Length = 313
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 18/161 (11%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
D D++ GG PCQG S NR R DE+N + + ++ KP F + ENV I+
Sbjct: 61 DADIVIGGFPCQGFSVANRNRGT----GDERNTLYLEMLRVIRDKKPTFFVAENVKGILS 116
Query: 582 FAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLP-PYALPTH 640
KG + + Y+V+ + YG+PQ R RV G + + +PTH
Sbjct: 117 LDKGSVIKMICKDFENAGYKVKYKLFNLADYGVPQKRERVIFIGVRNDMNFEYEFPMPTH 176
Query: 641 DVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLP 681
E N +D Q L R + + + ++ LP
Sbjct: 177 ------------EENP-TFDLFNQNALQRWVSISEVLAGLP 204
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.134 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,919,936,434
Number of Sequences: 23463169
Number of extensions: 538662182
Number of successful extensions: 2690296
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1333
Number of HSP's successfully gapped in prelim test: 3737
Number of HSP's that attempted gapping in prelim test: 2676282
Number of HSP's gapped (non-prelim): 11940
length of query: 718
length of database: 8,064,228,071
effective HSP length: 150
effective length of query: 568
effective length of database: 8,839,720,017
effective search space: 5020960969656
effective search space used: 5020960969656
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 81 (35.8 bits)