BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047980
(718 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q94F88|CMT3_ARATH DNA (cytosine-5)-methyltransferase CMT3 OS=Arabidopsis thaliana
GN=CMT3 PE=1 SV=2
Length = 839
Score = 698 bits (1802), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/626 (56%), Positives = 450/626 (71%), Gaps = 20/626 (3%)
Query: 102 VNKNRSSSKKPIDSVKKLPVRGEHDDDDEPEARFLGDPVPDGEARQRWPKRYEV------ 155
+ K + + K +VK+ PV ++ ++ ARFL +P+P+ EA+ WP RY+
Sbjct: 18 IPKPKKRAPKRAKTVKEEPVTVV-EEGEKHVARFLDEPIPESEAKSTWPDRYKPIEVQPP 76
Query: 156 KKQKRRNQKDDDEEEIIQAKCHYMWAEVDGHITYDLFDDAHVKAESGEEDYICKIVEMFE 215
K R+ KDD++ EII+A+CHY A VD Y+L DDA+V++ G++ +ICKI+EMFE
Sbjct: 77 KASSRKKTKDDEKVEIIRARCHYRRAIVDERQIYELNDDAYVQSGEGKDPFICKIIEMFE 136
Query: 216 AVDGTPYFTAQWYYRARDTVIESNAHLIDQRRVFFSEIQNDNPLECLVKKLNIARVPLNI 275
+G YFTA+W+YR DTV++ LI ++RVFFSEIQ+ N L L KKLNI +PLN
Sbjct: 137 GANGKLYFTARWFYRPSDTVMKEFEILIKKKRVFFSEIQDTNELGLLEKKLNILMIPLNE 196
Query: 276 DLEAKKLAIPHCDYYCDMMYLLPYSTFFSLPPENKRVSSETSSTISSDVDANE-----CE 330
+ + A +CD++CDM Y LPY TF ++ E SE SSTISSD D E E
Sbjct: 197 NTKETIPATENCDFFCDMNYFLPYDTFEAIQQETMMAISE-SSTISSDTDIREGAAAISE 255
Query: 331 VGEPQK-----MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLN 385
+GE + LLDLYSGCGAMSTGLC+GA L+GLNLVT+WAVD+N +AC+SL+ N
Sbjct: 256 IGECSQETEGHKKATLLDLYSGCGAMSTGLCMGAQLSGLNLVTKWAVDMNAHACKSLQHN 315
Query: 386 HPETEVRNESAEDFLTLLREWEKLCISFSLIARKDPQQQLYSFNDDGESEEDDDNGNVED 445
HPET VRN +AEDFL LL+EWEKLCI FSL R P + Y+ + ED+++ + E
Sbjct: 316 HPETNVRNMTAEDFLFLLKEWEKLCIHFSL--RNSPNSEEYANLHGLNNVEDNEDVSEES 373
Query: 446 ESEDDSEIFEVEKILKICYGDPKEIKKRGLYLKVRWRNYGPSEDTWEPIEGLSNCGEKIK 505
E+EDD E+F V+KI+ I +G PK++ KRGLYLKVRW NY S DTWEPIEGLSNC KI+
Sbjct: 374 ENEDDGEVFTVDKIVGISFGVPKKLLKRGLYLKVRWLNYDDSHDTWEPIEGLSNCRGKIE 433
Query: 506 EFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDF 565
EFV G+KS ILPLPG VDV+CGGPPCQG+SG NRFRN +PL D+KNKQL+V+M+IV++
Sbjct: 434 EFVKLGYKSGILPLPGGVDVVCGGPPCQGISGHNRFRNLLDPLEDQKNKQLLVYMNIVEY 493
Query: 566 LKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWG 625
LKPKFVLMENVVD++K AKG L R+A+ RL+QMNYQVR GMMAAGAYGL QFR+R FLWG
Sbjct: 494 LKPKFVLMENVVDMLKMAKGYLARFAVGRLLQMNYQVRNGMMAAGAYGLAQFRLRFFLWG 553
Query: 626 AQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDN 685
A P+E +P + LPTHD+V RG I EF+ N VAYDEG +LA KLLL+D ISDLP+V N
Sbjct: 554 ALPSEIIPQFPLPTHDLVHRGNIVKEFQGNIVAYDEGHTVKLADKLLLKDVISDLPAVAN 613
Query: 686 YESRDEIPYDREPETEFQCFIRLRKD 711
E RDEI YD++P T FQ FIRLRKD
Sbjct: 614 SEKRDEITYDKDPTTPFQKFIRLRKD 639
>sp|Q9AXT8|CMT1_MAIZE DNA (cytosine-5)-methyltransferase 1 OS=Zea mays GN=MET2A PE=1 SV=1
Length = 912
Score = 620 bits (1598), Expect = e-176, Method: Compositional matrix adjust.
Identities = 321/595 (53%), Positives = 397/595 (66%), Gaps = 40/595 (6%)
Query: 128 DDEPEARFLGDPVPDGEARQRWPKRYEVKKQKRRNQKDDDEEEIIQAKCHYMWAEVDGHI 187
D EPE F+G PV EAR WPKRY + K DEEE ++A+CHY A+VD ++
Sbjct: 132 DHEPE--FIGSPVAADEARSNWPKRY----GRSTAAKKPDEEEELKARCHYRSAKVD-NV 184
Query: 188 TYDLFDDAHVKAESGEEDYICKIVEMFEAVDGTPYFTAQWYYRARDTVIES------NAH 241
Y L DD +VKA E DYI +I E FE D YFT +W++RA DTVI S + H
Sbjct: 185 VYCLGDDVYVKAGENEADYIGRITEFFEGTDQCHYFTCRWFFRAEDTVINSLVSISVDGH 244
Query: 242 LIDQRRVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLAIPHCDYYCDMMYLLPYST 301
D RRVF SE +NDN L+C++ K+ I V N+D +AK I CD Y DM Y + YST
Sbjct: 245 KHDPRRVFLSEEKNDNVLDCIISKVKIVHVDPNMDPKAKAQLIESCDLYYDMSYSVAYST 304
Query: 302 FFSLPPENKRVSSETSSTISSDVDANECEVGEPQKMDVKLLDLYSGCGAMSTGLCLGANL 361
F ++ EN + S+T+S ISSD E P + LLDLYSGCG MSTGLCLGA L
Sbjct: 305 FANISSENGQSGSDTASGISSDDVDLETSSSMPTRT-ATLLDLYSGCGGMSTGLCLGAAL 363
Query: 362 AGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWEKLCISFSLIARKDP 421
+GL L TRWAVD N +ACQSLK NHP+TEVRNE A++FL LL+EW LC +
Sbjct: 364 SGLKLETRWAVDFNSFACQSLKYNHPQTEVRNEKADEFLALLKEWAVLCKKYV------- 416
Query: 422 QQQLYSFNDDGESEEDDDNGNVEDESEDDSEI----FEVEKILKICYGDPKEIKKRGLYL 477
+ D + + ED++++DS + F VEK++ ICYG ++ G+Y
Sbjct: 417 ------------QDVDSNLASSEDQADEDSPLDKDEFVVEKLVGICYGGSD--RENGIYF 462
Query: 478 KVRWRNYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSG 537
KV+W YGP EDTWEPI+ LS+C +KI+EFV G K KILPLPGDVDVICGGPPCQG+SG
Sbjct: 463 KVQWEGYGPEEDTWEPIDNLSDCPQKIREFVQEGHKRKILPLPGDVDVICGGPPCQGISG 522
Query: 538 FNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQ 597
FNR+RN+D PL DEKNKQ++ FMDIV +LKPK+VLMENVVDI+KFA G LG+YAL+ L+
Sbjct: 523 FNRYRNRDEPLKDEKNKQMVTFMDIVAYLKPKYVLMENVVDILKFADGYLGKYALSCLVA 582
Query: 598 MNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNTV 657
M YQ R+GMM AG YGLPQFRMRVFLWGA + LP Y LPT+DVV+RG P F + V
Sbjct: 583 MKYQARLGMMVAGCYGLPQFRMRVFLWGALSSMVLPKYPLPTYDVVVRGGAPNAFSQCMV 642
Query: 658 AYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQCFIRL-RKD 711
AYDE Q+ L + LLL DAISDLP V N++ D + Y P+TEFQ +IRL RKD
Sbjct: 643 AYDETQKPSLKKALLLGDAISDLPKVQNHQPNDVMEYGGSPKTEFQRYIRLSRKD 697
>sp|Q8LPU5|CMT3_MAIZE DNA (cytosine-5)-methyltransferase 3 OS=Zea mays GN=DMT105 PE=2
SV=1
Length = 915
Score = 617 bits (1591), Expect = e-175, Method: Compositional matrix adjust.
Identities = 319/591 (53%), Positives = 395/591 (66%), Gaps = 32/591 (5%)
Query: 128 DDEPEARFLGDPVPDGEARQRWPKRYEVKKQKRRNQKDDDEEEIIQAKCHYMWAEVDGHI 187
D PE F+G PV EA WPKRYE + ++DD+ ++A+CHY A+VD +I
Sbjct: 136 DHVPE--FIGSPVAAAEAHSNWPKRYERSTAANKPEEDDE----LKARCHYRSAKVD-NI 188
Query: 188 TYDLFDDAHVKAESGEEDYICKIVEMFEAVDGTPYFTAQWYYRARDTVIES------NAH 241
Y L DD +VKA E DYI +I E FE D YFT +W++RA DTVI S + H
Sbjct: 189 VYCLGDDVYVKAGENEADYIGRITEFFEGTDRCHYFTCRWFFRAEDTVINSLVSINVDGH 248
Query: 242 LIDQRRVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLAIPHCDYYCDMMYLLPYST 301
D RRVF SE +NDN L+C++ K+ I V N+D +AK I HCD Y DM Y + YST
Sbjct: 249 KHDPRRVFLSEEKNDNVLDCIISKVKIVHVDPNMDPKAKAQLIEHCDLYYDMSYSVAYST 308
Query: 302 FFSLPPENKRVSSETSSTISSDVDANECEVGEPQKMDVKLLDLYSGCGAMSTGLCLGANL 361
F ++ EN + SET+S ISSD E P++ LLDLYSGCG MSTGLCLGA L
Sbjct: 309 FANISSENGQSGSETASGISSDDAGLETSSNMPERT-ATLLDLYSGCGGMSTGLCLGAAL 367
Query: 362 AGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWEKLCISFSLIARKDP 421
+GL L TRWAVD+N +ACQSLK NHP+TEVRNE A++FL LL+EW LC + +D
Sbjct: 368 SGLKLETRWAVDLNSFACQSLKYNHPQTEVRNEKADEFLALLKEWAVLCEKY---VHQDV 424
Query: 422 QQQLYSFNDDGESEEDDDNGNVEDESEDDSEIFEVEKILKICYGDPKEIKKRGLYLKVRW 481
L ED ++ + D+ E F V+K++ I Y +K+G+Y KV+W
Sbjct: 425 DSNL-------AGSEDQEDADTLDKDE-----FVVQKLIGIRYDGTG--RKKGVYFKVQW 470
Query: 482 RNYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRF 541
YGP EDTWEPI+ LS+C KI+EFV G K KILPLPGDVDVICGGPPCQG+SGFNRF
Sbjct: 471 EGYGPEEDTWEPIDNLSDCPLKIREFVQEGRKRKILPLPGDVDVICGGPPCQGISGFNRF 530
Query: 542 RNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQ 601
RN+D PL DEKNKQ++ FMDIV +LKPK+VLMENVVDI+KFA G LG+YAL+ L+ M YQ
Sbjct: 531 RNRDEPLKDEKNKQMVTFMDIVAYLKPKYVLMENVVDILKFADGYLGKYALSCLVAMKYQ 590
Query: 602 VRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDE 661
R+GMM AG YGLPQFRMRVFLWGA + LP Y LPT+DVV+RG P F + VAYDE
Sbjct: 591 ARLGMMVAGCYGLPQFRMRVFLWGALSSMVLPKYPLPTYDVVVRGGAPNAFSQCMVAYDE 650
Query: 662 GQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQCFIRL-RKD 711
Q+ L + LLL DA SDLP V+N++ D + Y P+TEFQ +IRL RKD
Sbjct: 651 TQRPSLKKALLLGDAFSDLPKVENHQPNDVMEYGGSPKTEFQRYIRLGRKD 701
>sp|Q9ARI6|CMT2_MAIZE DNA (cytosine-5)-methyltransferase 2 OS=Zea mays GN=ZMET5 PE=2 SV=1
Length = 915
Score = 615 bits (1587), Expect = e-175, Method: Compositional matrix adjust.
Identities = 319/591 (53%), Positives = 395/591 (66%), Gaps = 32/591 (5%)
Query: 128 DDEPEARFLGDPVPDGEARQRWPKRYEVKKQKRRNQKDDDEEEIIQAKCHYMWAEVDGHI 187
D PE F+G PV EA WPKRYE + ++DD+ ++A+CHY A+VD +I
Sbjct: 136 DHVPE--FIGSPVGAAEAHSNWPKRYERSTAANKPEEDDE----LKARCHYRSAKVD-NI 188
Query: 188 TYDLFDDAHVKAESGEEDYICKIVEMFEAVDGTPYFTAQWYYRARDTVIES------NAH 241
Y L DD +VKA E DYI +I E FE D YFT +W++RA DTVI S + H
Sbjct: 189 VYCLGDDVYVKAGENEADYIGRITEFFEGTDRCHYFTCRWFFRAEDTVINSLVSINVDGH 248
Query: 242 LIDQRRVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLAIPHCDYYCDMMYLLPYST 301
D RRVF SE +NDN L+C++ K+ I V N+D +AK I HCD Y DM Y + YST
Sbjct: 249 KHDPRRVFLSEEKNDNVLDCIISKVKIVHVDPNMDPKAKAQLIEHCDLYYDMSYSVAYST 308
Query: 302 FFSLPPENKRVSSETSSTISSDVDANECEVGEPQKMDVKLLDLYSGCGAMSTGLCLGANL 361
F ++ EN + SET+S ISSD E P++ LLDLYSGCG MSTGLCLGA L
Sbjct: 309 FANISSENGQSGSETASGISSDDAGLETSSNMPERT-ATLLDLYSGCGGMSTGLCLGAAL 367
Query: 362 AGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWEKLCISFSLIARKDP 421
+GL L TRWAVD+N +ACQSLK NHP+TEVRNE A++FL LL+EW LC + +D
Sbjct: 368 SGLKLETRWAVDLNSFACQSLKYNHPQTEVRNEKADEFLALLKEWAVLCEKY---VHQDV 424
Query: 422 QQQLYSFNDDGESEEDDDNGNVEDESEDDSEIFEVEKILKICYGDPKEIKKRGLYLKVRW 481
L ED ++ + D+ E F V+K++ I Y +K+G+Y KV+W
Sbjct: 425 DSNL-------AGSEDQEDADTLDKDE-----FVVQKLIGIRYDGTG--RKKGVYFKVQW 470
Query: 482 RNYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRF 541
YGP EDTWEPI+ LS+C KI+EFV G K KILPLPGDVDVICGGPPCQG+SGFNRF
Sbjct: 471 EEYGPEEDTWEPIDNLSDCPLKIREFVQEGRKRKILPLPGDVDVICGGPPCQGISGFNRF 530
Query: 542 RNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQ 601
RN+D PL DEKNKQ++ FMDIV +LKPK+VLMENVVDI+KFA G LG+YAL+ L+ M YQ
Sbjct: 531 RNRDEPLKDEKNKQMVTFMDIVAYLKPKYVLMENVVDILKFADGYLGKYALSCLVAMKYQ 590
Query: 602 VRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDE 661
R+GMM AG YGLPQFRMRVFLWGA + LP Y LPT+DVV+RG P F + VAYDE
Sbjct: 591 ARLGMMVAGCYGLPQFRMRVFLWGALSSMVLPKYPLPTYDVVVRGGAPNAFSQCMVAYDE 650
Query: 662 GQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQCFIRL-RKD 711
Q+ L + LLL DA SDLP V+N++ D + Y P+TEFQ +IRL RKD
Sbjct: 651 TQRPSLKKALLLGDAFSDLPKVENHQPNDVMEYGGSPKTEFQRYIRLGRKD 701
>sp|Q94F87|CMT2_ARATH DNA (cytosine-5)-methyltransferase CMT2 OS=Arabidopsis thaliana
GN=CMT2 PE=2 SV=3
Length = 1295
Score = 588 bits (1516), Expect = e-167, Method: Compositional matrix adjust.
Identities = 322/714 (45%), Positives = 449/714 (62%), Gaps = 32/714 (4%)
Query: 10 SLRLSSKRCRCGLPLSRSPAA--AAAAAAAAATTTTTMPTKRKTRSSVNDNTSLSSKKSK 67
SL++S GL ++ + A + T+ K KTR ++T + S
Sbjct: 399 SLKISKNDTSNGLTMTTALVEQDAMESLLQGKTSACGAADKGKTREMHVNSTVIYLSDSD 458
Query: 68 VEPEPEACVEKEGEVAEVICENSVAGSGSSSGV---KVNKNRSSSKKPIDSVKKLPVRGE 124
EP + G+ + S SG + G+ +N S+K+ V + V
Sbjct: 459 ---EPSSIEYLNGDNLTQVESGSALSSGGNEGIVSLDLNNPTKSTKRKGKRVTRTAV--- 512
Query: 125 HDDDDEPEARFLGDPVPDGEARQRWPKRYEVKKQK---RRNQKDDDEEEII-QAKCHYMW 180
+ + F+G+P+ EA++RW RYE+K++K R Q +DDE++I+ +CHY
Sbjct: 513 QEQNKRSICFFIGEPLSCEEAQERWRWRYELKERKSKSRGQQSEDDEDKIVANVECHYSQ 572
Query: 181 AEVDGHITYDLFDDAHVKAESGEEDYICKIVEMFEAVDGTPYFTAQWYYRARDTVIESNA 240
A+VDGH T+ L D A++K E EE ++ +IVE F+ DG YF QW+YRA DT++E A
Sbjct: 573 AKVDGH-TFSLGDFAYIKGEE-EETHVGQIVEFFKTTDGESYFRVQWFYRATDTIMERQA 630
Query: 241 HLIDQRRVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLAIPHCDYYCDMMYLLPYS 300
D+RR+F+S + NDNP++CL+ K+ + +V + L+ + DYY DM Y + YS
Sbjct: 631 TNHDKRRLFYSTVMNDNPVDCLISKVTVLQVSPRVGLKPNSI---KSDYYFDMEYCVEYS 687
Query: 301 TFFSLPPENKRVSSETSSTISSDVDANECEVGEPQKM----DVKLLDLYSGCGAMSTGLC 356
TF +L N + +SE +DV E +K ++ +LDLYSGCG MSTGL
Sbjct: 688 TFQTL--RNPK-TSENKLECCADVVPTESTESILKKKSFSGELPVLDLYSGCGGMSTGLS 744
Query: 357 LGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWEKLCISFSLI 416
LGA ++G+++VT+WAVD N AC+SLKLNHP T+VRN++A DFL LL+EW+KLC + +
Sbjct: 745 LGAKISGVDVVTKWAVDQNTAACKSLKLNHPNTQVRNDAAGDFLQLLKEWDKLCKRY-VF 803
Query: 417 ARKDPQQQLYSFNDDGESEEDDDNGNVEDESEDDSEIFEVEKILKICYGDPKEIKKRGLY 476
L S N E+ + + + +SE+ +EVEK++ IC+GD + K GL
Sbjct: 804 NNDQRTDTLRSVNSTKETSGSSSSSDDDSDSEE----YEVEKLVDICFGDHDKTGKNGLK 859
Query: 477 LKVRWRNYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVS 536
KV W+ Y EDTWE E LSNC + I+EFVT GFKSKILPLPG V VICGGPPCQG+S
Sbjct: 860 FKVHWKGYRSDEDTWELAEELSNCQDAIREFVTSGFKSKILPLPGRVGVICGGPPCQGIS 919
Query: 537 GFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLI 596
G+NR RN D+PL DE+N+Q+IVFMDIV++LKP +VLMENVVDI++ KG LGRYAL+RL+
Sbjct: 920 GYNRHRNVDSPLNDERNQQIIVFMDIVEYLKPSYVLMENVVDILRMDKGSLGRYALSRLV 979
Query: 597 QMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNT 656
M YQ R+G+M AG YGL QFR RVF+WGA P + LPP+ LPTHDV++R +P EFERN
Sbjct: 980 NMRYQARLGIMTAGCYGLSQFRSRVFMWGAVPNKNLPPFPLPTHDVIVRYGLPLEFERNV 1039
Query: 657 VAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQCFIRLRK 710
VAY EGQ +L + L+L+DAISDLP V N E R+++PY+ P+T+FQ +IR K
Sbjct: 1040 VAYAEGQPRKLEKALVLKDAISDLPHVSNDEDREKLPYESLPKTDFQRYIRSTK 1093
>sp|O49139|CMT1_ARATH Putative DNA (cytosine-5)-methyltransferase CMT1 OS=Arabidopsis
thaliana GN=CMT1 PE=5 SV=2
Length = 791
Score = 575 bits (1482), Expect = e-163, Method: Compositional matrix adjust.
Identities = 303/605 (50%), Positives = 399/605 (65%), Gaps = 22/605 (3%)
Query: 119 LPVRGEHDDDDEPEAR--FLGDPVPDGEARQRWPKRYEVKKQK---------RRNQKDDD 167
+ R + EPE+ F G P+ E+ RWP RY+ KK K + K +D
Sbjct: 1 MAARNKQKKRAEPESDLCFAGKPMSVVESTIRWPHRYQSKKTKLQAPTKKPANKGGKKED 60
Query: 168 EEEIIQAKCHYMWAEVDGHITYDLFDDAHVKAESGEEDYICKIVEMFEAVDGTPYFTAQW 227
EE I QAKCH+ A VDG + +L DD +V G+ +I K++E+FEA DG PY +W
Sbjct: 61 EEIIKQAKCHFDKALVDG-VLINLNDDVYVTGLPGKLKFIAKVIELFEADDGVPYCRFRW 119
Query: 228 YYRARDTVIESNAHLIDQRRVFFSEIQNDNPLECLVKKLNIARVPL-NIDLEAKKLAIPH 286
YYR DT+IE +HL+ +RVF S +NDNPL C+ K+NIA+VPL I ++ IP
Sbjct: 120 YYRPEDTLIERFSHLVQPKRVFLSNDENDNPLTCIWSKVNIAKVPLPKITSRIEQRVIPP 179
Query: 287 CDYYCDMMYLLPYSTFFSLPPENKRVSSETSSTISSDVDANECEVGEPQKMDVKLLDLYS 346
CDYY DM Y +PY F +S+ S A C K + LLDLYS
Sbjct: 180 CDYYYDMKYEVPYLNF------TSADDGSDASSSLSSDSALNC-FENLHKDEKFLLDLYS 232
Query: 347 GCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREW 406
GCGAMSTG C+GA+++G+ L+T+W+VDIN++AC SLKLNHPETEVRNE+AEDFL LL+EW
Sbjct: 233 GCGAMSTGFCMGASISGVKLITKWSVDINKFACDSLKLNHPETEVRNEAAEDFLALLKEW 292
Query: 407 EKLCISFSLIARKDPQQQLYSFNDDGESEEDDDNGNVEDESEDDSEIFEVEKILKICYGD 466
++LC FSL++ +P + + S +D E EE+DD +E + FEVEK L I +GD
Sbjct: 293 KRLCEKFSLVSSTEPVESI-SELEDEEVEENDDIDEASTGAELEPGEFEVEKFLGIMFGD 351
Query: 467 PKEIKKRGLYLKVRWRNYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDVDVI 526
P+ ++ L L VRW+ Y S DTWEP GL NC EK+KE+V GFKS +LPLPG V +
Sbjct: 352 PQGTGEKTLQLMVRWKGYNSSYDTWEPYSGLGNCKEKLKEYVIDGFKSHLLPLPGTVYTV 411
Query: 527 CGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGL 586
CGGPPCQG+SG+NR+RN + PL D+KN+QL+VF+DI+DFLKP +VLMENVVD+++F+KG
Sbjct: 412 CGGPPCQGISGYNRYRNNEAPLEDQKNQQLLVFLDIIDFLKPNYVLMENVVDLLRFSKGF 471
Query: 587 LGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRG 646
L R+A+A + MNYQ R+GMMAAG+YGLPQ R RVFLW AQP+EKLPPY LPTH+V +
Sbjct: 472 LARHAVASFVAMNYQTRLGMMAAGSYGLPQLRNRVFLWAAQPSEKLPPYPLPTHEVAKKF 531
Query: 647 VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPY-DREPETEFQCF 705
P EF+ V + + +L L L DAISDLP V NY + D + Y D P+TEF+ F
Sbjct: 532 NTPKEFKDLQVGRIQMEFLKLDNALTLADAISDLPPVTNYVANDVMDYNDAAPKTEFENF 591
Query: 706 IRLRK 710
I L++
Sbjct: 592 ISLKR 596
>sp|Q7Y1I7|DNM1A_ORYSJ DNA (cytosine-5)-methyltransferase 1A OS=Oryza sativa subsp. japonica
GN=MET1A PE=2 SV=1
Length = 1527
Score = 147 bits (370), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 77/198 (38%), Positives = 110/198 (55%), Gaps = 7/198 (3%)
Query: 513 KSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVL 572
K K LP+PG+V+ I GGPPCQG SG NRF +P + + + ++ F+ ++ +P+F L
Sbjct: 1178 KIKNLPVPGEVEFINGGPPCQGFSGMNRFNQ--SPWSKVQCEMILAFLSFAEYFRPRFFL 1235
Query: 573 MENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKL 632
+ENV + V F KG R LA L++M YQVR G++ AGAYG+ Q R R F+W A P E L
Sbjct: 1236 LENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAYGVAQSRKRAFIWAAAPGETL 1295
Query: 633 PPYALPTHDVV---LRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESR 689
P + P H L+ +P + A R + ++D I DLP+V+N +
Sbjct: 1296 PEWPEPMHVFASPELKITLPD--GKFYAAVKSTAAGAPFRSITVRDTIGDLPAVENGAGK 1353
Query: 690 DEIPYDREPETEFQCFIR 707
I Y P + FQ IR
Sbjct: 1354 PTIQYGSGPVSWFQKKIR 1371
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 85/188 (45%), Gaps = 22/188 (11%)
Query: 228 YYRARDTVIESNAHLIDQRRVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKL-AIPH 286
+YR D + + A+ D R V++SE P+ + K V L DL L A+
Sbjct: 974 FYRP-DDISSTKAYSSDIREVYYSEDIISVPVVMIEGK---CEVRLKDDLPNSDLPAVVE 1029
Query: 287 CDYYCDMMYLLPYSTFFSLPPENKRVSSETSSTISSDVDANE--CEV---GEPQKMD--- 338
+ C+ +Y LPP N R+ + T +S + + C++ G + D
Sbjct: 1030 HVFCCEYLYDPANGALKQLPP-NVRLVTLTRKVPASKKNKGKQICDIELGGSDKPKDGQS 1088
Query: 339 ---VKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNES 395
+ LD+++GCG +S GL +GL+L T+WA++ E A + NHPE V E+
Sbjct: 1089 ENCLATLDIFAGCGGLSEGL----QRSGLSL-TKWAIEYEEPAGDAFGENHPEAAVFVEN 1143
Query: 396 AEDFLTLL 403
L +
Sbjct: 1144 CNVILKAI 1151
>sp|Q27746|DNMT1_PARLI DNA (cytosine-5)-methyltransferase PliMCI OS=Paracentrotus lividus
GN=DNMT PE=2 SV=1
Length = 1612
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/215 (36%), Positives = 124/215 (57%), Gaps = 9/215 (4%)
Query: 499 NCGEKIKEFVTHGFKS----KILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNK 554
+C E ++ V G K+ + LP GDV+++CGGPPCQG SG NRF +++ + KN
Sbjct: 1182 DCNELLR-LVMQGEKTSRTGQKLPQKGDVELLCGGPPCQGFSGMNRFNSRE--YSKFKNS 1238
Query: 555 QLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGL 614
+ ++ D+ +P+F L+ENV + V + K ++ + AL LI+M YQ G++ AG YG+
Sbjct: 1239 LISSYLSYCDYYRPRFFLLENVRNFVSYKKNMVLKLALRCLIRMGYQCTFGILQAGQYGV 1298
Query: 615 PQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEF--ERNTVAYDEGQQAELARKLL 672
PQ R R + A P EKLP Y P H R + E+ + ++ + R +
Sbjct: 1299 PQTRRRAIILAAAPGEKLPFYPEPLHVFSSRACSLSVMIGEKKIESNNQWCLSAPYRTIT 1358
Query: 673 LQDAISDLPSVDNYESRDEIPYDREPETEFQCFIR 707
++D +SDLP+++N + EI YD EP+++FQ IR
Sbjct: 1359 VRDTMSDLPTINNGAQKLEISYDGEPQSDFQKKIR 1393
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 339 VKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAED 398
+K LD+++GCG +S G + AG+ + WA++ E A Q+ +LN+P + V ++ +
Sbjct: 1131 LKCLDVFAGCGGLSEGF----HQAGI-CESSWAIEKEEPAAQAYRLNNPGSTVFSDDCNE 1185
Query: 399 FLTLLREWEKLCISFSLIARKDPQQ 423
L L+ + EK S +K PQ+
Sbjct: 1186 LLRLVMQGEKT----SRTGQKLPQK 1206
>sp|B1Q3J6|DNM1B_ORYSJ DNA (cytosine-5)-methyltransferase 1B OS=Oryza sativa subsp. japonica
GN=MET1B PE=2 SV=1
Length = 1529
Score = 139 bits (351), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 108/194 (55%), Gaps = 7/194 (3%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP+PG+V+ I GGPPCQG SG NRF +P + + + ++ F+ ++ +P+F L+ENV
Sbjct: 1183 LPVPGEVEFINGGPPCQGFSGMNRFNQ--SPWSKVQCEMILAFLSFAEYFRPRFFLLENV 1240
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F KG R +A L++M YQVR G++ AG +G+ Q R R F+W A P E LP +
Sbjct: 1241 RNFVSFNKGQTFRLTVASLLEMGYQVRFGILEAGTFGVAQSRKRAFIWAAAPGETLPDWP 1300
Query: 637 LPTHDVV---LRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIP 693
P H L+ +P + A R + ++D I DLP V+N S+ +
Sbjct: 1301 EPMHVFASPELKINLPD--GKYYAAAKSTAGGAPFRAITVRDTIGDLPKVENGASKLLLE 1358
Query: 694 YDREPETEFQCFIR 707
Y EP + FQ IR
Sbjct: 1359 YGGEPISWFQKKIR 1372
Score = 60.1 bits (144), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 125/266 (46%), Gaps = 51/266 (19%)
Query: 163 QKDDDEEEI-IQAKCHYMWAEVDGHITYDLFDDAHVKAE--SGEED-------------- 205
QK+ D +E+ I +K +++ +ITY++ D +++ + S EED
Sbjct: 889 QKEPDCDELQILSKNSFIYR----NITYNVNDYLYIRPDFFSQEEDRATFKGGRNVGLKP 944
Query: 206 -YICKIVEMFEAVD------GTPYFTAQWYYRARDTVIESNAHLIDQRRVFFSEIQNDNP 258
+C ++++ E + + + +YR D + + A++ D R V++SE P
Sbjct: 945 YVVCHLLDVHEPAGSRKIHPASTKISVRRFYRP-DDISSAKAYVSDIREVYYSENIVKVP 1003
Query: 259 LECLVKKLNIARVPLNIDLEAKKLAIPHCDYYCDMMYLLPYSTFFSLPPENKRVSSETSS 318
++ + K + + ++I + + H +++C+ Y LPP K +S + +
Sbjct: 1004 VDMIEGKCEVKK-KIDISNSDVPVMVEH-EFFCEHFYDPATGALKQLPPNVKLMSVQQKA 1061
Query: 319 TI------------SSDVDANEC-EVGEPQKMDVKLLDLYSGCGAMSTGLCLGANLAGLN 365
T S VD+++C +V + ++ LD+++GCG +S GL AG++
Sbjct: 1062 TGALKKNKGKQICESDQVDSDKCTKVSKENRLAT--LDIFAGCGGLSEGL----QQAGVS 1115
Query: 366 LVTRWAVDINEYACQSLKLNHPETEV 391
T+WA++ E A ++ NHPE V
Sbjct: 1116 F-TKWAIEYEEPAGEAFTKNHPEAAV 1140
>sp|P34881|DNMT1_ARATH DNA (cytosine-5)-methyltransferase 1 OS=Arabidopsis thaliana GN=DMT1
PE=1 SV=1
Length = 1534
Score = 139 bits (351), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 77/195 (39%), Positives = 107/195 (54%), Gaps = 9/195 (4%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LPLPG VD I GGPPCQG SG NRF + + + + ++ F+ D+ +P++ L+ENV
Sbjct: 1183 LPLPGQVDFINGGPPCQGFSGMNRFNQ--SSWSKVQCEMILAFLSFADYFRPRYFLLENV 1240
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
V F KG + LA L++M YQVR G++ AGAYG+ Q R R F+W A P E LP +
Sbjct: 1241 RTFVSFNKGQTFQLTLASLLEMGYQVRFGILEAGAYGVSQSRKRAFIWAAAPEEVLPEWP 1300
Query: 637 LPTHDVVLRGVIPTEFE-RNTVAYDEGQQAELA---RKLLLQDAISDLPSVDNYESRDEI 692
P H + GV + + Y + L R + ++D I DLPSV+N +SR
Sbjct: 1301 EPMH---VFGVPKLKISLSQGLHYAAVRSTALGAPFRPITVRDTIGDLPSVENGDSRTNK 1357
Query: 693 PYDREPETEFQCFIR 707
Y + FQ IR
Sbjct: 1358 EYKEVAVSWFQKEIR 1372
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 96/204 (47%), Gaps = 30/204 (14%)
Query: 207 ICKIVEMF-----EAVDGTPYFTAQWYYRARDTVIESNAHLIDQRRVFFSEIQNDNPLEC 261
+C+++E+ +A G+ + +YR D E A+ D + ++FS+ P
Sbjct: 948 VCQLLEIVPKESRKADLGSFDVKVRRFYRPEDVSAE-KAYASDIQELYFSQDTVVLPPGA 1006
Query: 262 LVKKLNIAR---VPLNIDLEAKKLAIPHCDYYCDMMYLLPYSTFFSLP----PENKRVSS 314
L K + + +PL +++ I ++CD+ + + LP P+ +
Sbjct: 1007 LEGKCEVRKKSDMPL-----SREYPISDHIFFCDLFFDTSKGSLKQLPANMKPKFSTIKD 1061
Query: 315 ET------SSTISSDVDANECEVGEPQK-MDVKLLDLYSGCGAMSTGLCLGANLAGLNLV 367
+T + S++++ + EP K + + LD+++GCG +S GL AG++
Sbjct: 1062 DTLLRKKKGKGVESEIESEIVKPVEPPKEIRLATLDIFAGCGGLSHGL----KKAGVS-D 1116
Query: 368 TRWAVDINEYACQSLKLNHPETEV 391
+WA++ E A Q+ K NHPE+ V
Sbjct: 1117 AKWAIEYEEPAGQAFKQNHPESTV 1140
>sp|P13864|DNMT1_MOUSE DNA (cytosine-5)-methyltransferase 1 OS=Mus musculus GN=Dnmt1 PE=1
SV=5
Length = 1620
Score = 137 bits (345), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 107/197 (54%), Gaps = 12/197 (6%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P+F L+ENV
Sbjct: 1214 LPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRPRFFLLENV 1271
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V + + ++ + L L++M YQ G++ AG YG+ Q R R + A P EKLP +
Sbjct: 1272 RNFVSYRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFP 1331
Query: 637 LPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRD 690
P H R V +F N G R + ++D +SDLP + N S
Sbjct: 1332 EPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEIQNGASNS 1387
Query: 691 EIPYDREPETEFQCFIR 707
EIPY+ EP + FQ +R
Sbjct: 1388 EIPYNGEPLSWFQRQLR 1404
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 12/108 (11%)
Query: 303 FSLPPENKRVSSETSSTISSDVDANECEVGEPQKMD-------VKLLDLYSGCGAMSTGL 355
F PP + R + +V EP++ + ++ LD++SGCG +S G
Sbjct: 1099 FEDPPNHARSPGNKGKGKGKGKGKGKHQVSEPKEPEAAIKLPKLRTLDVFSGCGGLSEGF 1158
Query: 356 CLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLL 403
+ AG++ T WA+++ + A Q+ +LN+P T V E L L+
Sbjct: 1159 ----HQAGIS-ETLWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLLKLV 1201
>sp|P26358|DNMT1_HUMAN DNA (cytosine-5)-methyltransferase 1 OS=Homo sapiens GN=DNMT1 PE=1
SV=2
Length = 1616
Score = 135 bits (341), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 74/205 (36%), Positives = 110/205 (53%), Gaps = 12/205 (5%)
Query: 509 THGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKP 568
T + + LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P
Sbjct: 1203 TTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRP 1260
Query: 569 KFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQP 628
+F L+ENV + V F + ++ + L L++M YQ G++ AG YG+ Q R R + A P
Sbjct: 1261 RFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAP 1320
Query: 629 TEKLPPYALPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPS 682
EKLP + P H R V +F N G R + ++D +SDLP
Sbjct: 1321 GEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPE 1376
Query: 683 VDNYESRDEIPYDREPETEFQCFIR 707
V N S EI Y+ EP++ FQ +R
Sbjct: 1377 VRNGASALEISYNGEPQSWFQRQLR 1401
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 11/83 (13%)
Query: 326 ANECEVGEPQKMDVKL-----LDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQ 380
+ CE EP+ +++KL LD++SGCG +S G + AG++ T WA+++ + A Q
Sbjct: 1122 SQACEPSEPE-IEIKLPKLRTLDVFSGCGGLSEGF----HQAGIS-DTLWAIEMWDPAAQ 1175
Query: 381 SLKLNHPETEVRNESAEDFLTLL 403
+ +LN+P + V E L L+
Sbjct: 1176 AFRLNNPGSTVFTEDCNILLKLV 1198
>sp|Q92072|DNMT1_CHICK DNA (cytosine-5)-methyltransferase 1 OS=Gallus gallus GN=DNMT1 PE=1
SV=1
Length = 1537
Score = 134 bits (337), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 107/197 (54%), Gaps = 12/197 (6%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P+F L+ENV
Sbjct: 1126 LPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRPRFFLLENV 1183
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F + ++ + L L++M YQ G++ AG YG+ Q R R + A P EKLP +
Sbjct: 1184 RNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIVLAAAPGEKLPMFP 1243
Query: 637 LPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRD 690
P H R V +F N G R + ++D +SDLP + N S
Sbjct: 1244 EPLHVFAPRACQLSVVVDDKKFVSNITRTYSGP----FRTITVRDTMSDLPEIRNGASAL 1299
Query: 691 EIPYDREPETEFQCFIR 707
EI Y+ EP++ FQ IR
Sbjct: 1300 EISYNGEPQSWFQRQIR 1316
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 14/100 (14%)
Query: 329 CEVGEPQKMDVKL-----LDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLK 383
CE EP+ ++KL LD++SGCG +S G + AG++ T WA+++ E A Q+ +
Sbjct: 1039 CEQSEPEPTELKLPKLRTLDVFSGCGGLSEGF----HQAGVS-ETLWAIEMWEPAAQAFR 1093
Query: 384 LNHPETEVRNESAEDFLTLLREWEKLCISFSLIARKDPQQ 423
LN+P T V E L L+ EK + + +K PQ+
Sbjct: 1094 LNNPGTTVFTEDCNVLLKLVMSGEKT----NSLGQKLPQK 1129
>sp|Q24K09|DNMT1_BOVIN DNA (cytosine-5)-methyltransferase 1 OS=Bos taurus GN=DNMT1 PE=2 SV=1
Length = 1611
Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 108/201 (53%), Gaps = 12/201 (5%)
Query: 513 KSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVL 572
+ + LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P++ L
Sbjct: 1204 RGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRPRYFL 1261
Query: 573 MENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKL 632
+ENV + V F + ++ + L L++M YQ G++ AG YG+ Q R R + A P E L
Sbjct: 1262 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEPL 1321
Query: 633 PPYALPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNY 686
P + P H R V +F N G R + ++D +SDLP + N
Sbjct: 1322 PLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITVRDTMSDLPEIRNG 1377
Query: 687 ESRDEIPYDREPETEFQCFIR 707
S EI Y+ EP++ FQ +R
Sbjct: 1378 ASALEISYNGEPQSWFQRQLR 1398
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 54/111 (48%), Gaps = 12/111 (10%)
Query: 300 STFFSLPPENKRVSSETSSTISSDVDANECEVGEPQKMDVKL-------LDLYSGCGAMS 352
S F PP + R + + + + EP +++ ++ LD++SGCG +S
Sbjct: 1090 SKSFEDPPNHARSTGNKGKGKGKGKNRTKSQTCEPSELETEIKLPKLRTLDVFSGCGGLS 1149
Query: 353 TGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLL 403
G + AG++ T WA+++ + A Q+ +LN+P + V E L L+
Sbjct: 1150 EGF----HQAGIS-ETLWAIEMWDPAAQAFRLNNPGSTVFTEDCNVLLKLV 1195
>sp|Q9Z330|DNMT1_RAT DNA (cytosine-5)-methyltransferase 1 OS=Rattus norvegicus GN=Dnmt1
PE=1 SV=2
Length = 1622
Score = 127 bits (319), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 98/184 (53%), Gaps = 12/184 (6%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
LP GDV+++CGGPPCQG SG NRF ++ + KN ++ F+ D+ +P+F L+ENV
Sbjct: 1216 LPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRPRFFLLENV 1273
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
+ V F + ++ + L L++M YQ G++ AG YG+ Q R R + A P EKLP +
Sbjct: 1274 RNFVSFRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFP 1333
Query: 637 LPTHDVVLRG------VIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRD 690
P H R V +F N G R + ++D +SDLP + N S
Sbjct: 1334 EPLHVFAPRACQLSVVVDDKKFVSNITRLSSGP----FRTITMRDTMSDLPEIQNGASAP 1389
Query: 691 EIPY 694
EI Y
Sbjct: 1390 EISY 1393
Score = 46.6 bits (109), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 12/108 (11%)
Query: 303 FSLPPENKRVSSETSSTISSDVDANECEVGEPQKMD-------VKLLDLYSGCGAMSTGL 355
F PP + R + +V EP++ + ++ LD++SGCG GL
Sbjct: 1101 FEDPPNHARSPGNKGKGKGKGKGKGKPQVSEPKEPEAAIKLPKLRTLDVFSGCG----GL 1156
Query: 356 CLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLL 403
G + AG++ T WA+++ E A Q+ +LN+P T V E L L+
Sbjct: 1157 TEGFHQAGIS-ETLWAIEMWEPAAQAFRLNNPGTTVFTEDCNVLLKLV 1203
>sp|P94147|MTA1_RUEGE Modification methylase AgeI OS=Ruegeria gelatinovora GN=ageIM PE=3
SV=1
Length = 429
Score = 89.4 bits (220), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 103/191 (53%), Gaps = 14/191 (7%)
Query: 520 PGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDI 579
PG VDV+ GGPPCQG S + + R+ D +N+ + + V+ +PK L+ENVV +
Sbjct: 68 PGQVDVVMGGPPCQGFSTYGQRRDDD-----ARNQLYVPYFGFVEEFRPKAFLIENVVGL 122
Query: 580 VKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPT 639
+ + G + +AR + Y + + A YG+PQ R RVF++GA +++ P P+
Sbjct: 123 LSMSGGAVLADMVARAEALGYAADVVTLDACEYGVPQHRRRVFIFGAADGQRIDP-PQPS 181
Query: 640 HDVVLR-GVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPS--VDNYESRDEIPYDR 696
H R GV+ ++ ++ +D + L ++DAISDLP + +++ + Y
Sbjct: 182 HVNGKRSGVVLN--DQPSLFFD---GPSIQPALTVRDAISDLPDEVLVPRDTQKPMEYPE 236
Query: 697 EPETEFQCFIR 707
P+TE+Q +R
Sbjct: 237 PPKTEYQRLMR 247
>sp|P05302|MTD1_DESNO Modification methylase DdeI OS=Desulfomicrobium norvegicum (strain
DSM 1741 / NCIMB 8310) GN=ddeIM PE=3 SV=1
Length = 415
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 84/187 (44%), Gaps = 34/187 (18%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
DVD I GGPPCQG F+ N+D D +N + F+ V F PKF +MENV+ I+
Sbjct: 66 DVDGIIGGPPCQG---FSLSGNRDQ--KDPRNSLFVDFVRFVKFFSPKFFVMENVLGILS 120
Query: 582 F---AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYAL- 637
++ + + Y+V + ++ A YG+PQ R RVF G + L L
Sbjct: 121 MKTKSRQYVKDIIAEEFSNVGYKVCVIILNACDYGVPQSRQRVFFIGLKSDRPLNQQILT 180
Query: 638 -PTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDR 696
P+ VI +E+ L++AISDLP ++ E + Y
Sbjct: 181 PPSK------VIESEYTS------------------LEEAISDLPVIEAGEGGEVQDYPV 216
Query: 697 EPETEFQ 703
P ++Q
Sbjct: 217 APRNKYQ 223
>sp|O52702|MTA1_ACEPA Modification methylase ApaLI OS=Acetobacter pasteurianus GN=apaLIM
PE=3 SV=1
Length = 429
Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 58/105 (55%), Gaps = 13/105 (12%)
Query: 525 VICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAK 584
V+ GGPPCQG S RN AD +N + +++IV+ L P++++ ENV ++
Sbjct: 74 VVIGGPPCQGFSTAGP-RN----FADPRNLLIFNYLNIVERLSPRWLIFENVEGLLTSGG 128
Query: 585 GLLGRYALARLIQ----MNYQVRMGMMAAGAYGLPQFRMRVFLWG 625
G LARL++ M Y VR+ + AYG+PQ R RV + G
Sbjct: 129 G----RDLARLVREFVDMGYSVRLQKVNLAAYGVPQTRKRVLIIG 169
>sp|P50192|MTHA_HAEPH Modification methylase HphIA OS=Haemophilus parahaemolyticus
GN=hphIAM PE=3 SV=1
Length = 372
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIV-FMDIVDFLKPKFVLMENVVDIVK 581
VDV+ GGPPCQG S + AD+ L F+ +V +PKF +MENV +
Sbjct: 113 VDVVIGGPPCQGFSMAGKI---GRTFADDPRNHLFKEFVRVVKLTQPKFFVMENVARLFT 169
Query: 582 FAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWG 625
G + ++ Y+V+ ++ A +G+PQ R R+ G
Sbjct: 170 HNSGKTRAEITEQFERLGYKVKCKVLNAADFGVPQLRSRIVFIG 213
>sp|P52311|MTX2_XANOR Modification methylase XorII OS=Xanthomonas oryzae pv. oryzae
(strain KACC10331 / KXO85) GN=xorIIM PE=3 SV=2
Length = 424
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 86/199 (43%), Gaps = 47/199 (23%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIV- 580
D+D++ GG PCQG S + L D +N+ + ++ +V LKPK+ + ENV +
Sbjct: 73 DIDIVIGGAPCQGFSLIGK-----RALDDSRNQLVHHYVRVVMELKPKYFVFENVKGLTV 127
Query: 581 ----KFAKGLLGRYALARL-IQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPY 635
+F K ++ + + +Y+V + A YG+PQ R R+ L GA+ LP Y
Sbjct: 128 GKHRQFLKEVIEAFQNGGYDVVTDYRV----LNAADYGVPQDRRRLILMGARKGLPLPAY 183
Query: 636 ALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYE---SRDEI 692
PT R TV DAI D+P +++ RD +
Sbjct: 184 PEPT-------------GRTTVG----------------DAIGDIPDAESFPELWERDWV 214
Query: 693 PYDREPETEFQCFIRLRKD 711
+ + ++R +KD
Sbjct: 215 KAKYGKPSTYAAYLRGKKD 233
>sp|P34882|MTAA_SYNP2 Modification methylase AquI subunit alpha OS=Synechococcus sp.
(strain ATCC 27264 / PCC 7002 / PR-6) GN=aquIMA PE=3
SV=1
Length = 248
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 81/176 (46%), Gaps = 26/176 (14%)
Query: 514 SKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLM 573
+K+ PL ++D++ GGPPCQ S + D+P + ++ F+ +V PK +M
Sbjct: 66 AKVNPL--EIDLVIGGPPCQSFSLAGKRMGMDDP----RGMLVLEFLRVVREALPKCFVM 119
Query: 574 ENVVDIVKFAKGLLGRYALARLIQ--------MNYQVRMGMMAAGAYGLPQFRMRVFLWG 625
ENV ++ ++KG + Q Y V ++ A +G+PQFR RVF+ G
Sbjct: 120 ENVKGMINWSKGKALEAIMTEASQPIKYAGKEYKYAVSYHVLNAADFGVPQFRERVFIVG 179
Query: 626 AQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLP 681
+ K + PTH P+ R + + +L +QDAIS LP
Sbjct: 180 NR-LGKTFQFPEPTHG-------PSNQARQIDLFGK----QLKPYKTVQDAISTLP 223
Score = 37.4 bits (85), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 48/107 (44%), Gaps = 24/107 (22%)
Query: 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESA 396
M+ KL+ L+SG G M G + AG + T AV+ + C +L+LN P+T V
Sbjct: 1 MEKKLISLFSGAGGMDIGF----HAAGFS--TAVAVEQDPSCCNTLRLNMPDTPVIEGDI 54
Query: 397 EDFLT-LLREWEKL-------------CISFSLIARK----DPQQQL 425
T ++ E K+ C SFSL ++ DP+ L
Sbjct: 55 TSITTQVILEAAKVNPLEIDLVIGGPPCQSFSLAGKRMGMDDPRGML 101
>sp|Q58600|MT52_METJA Probable modification methylase MJ1200 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ1200 PE=3 SV=1
Length = 366
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 9/105 (8%)
Query: 523 VDVICGGPPCQGVSGFNRFRNK---DNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDI 579
VDVI GGPPC+G +G N R K D DE + ++ ++ IV L+PK +MENV I
Sbjct: 124 VDVIIGGPPCEGYTGANPKREKNPYDRLYKDETGRLVLEYIRIVGDLQPKIFVMENVPGI 183
Query: 580 VKFAKGLLGRYALARLIQMNYQ-VRMGMMAAGAYGLPQFRMRVFL 623
+ ++ + ++ Y+ V + A YG P R RVF+
Sbjct: 184 KEVRGAIIKEFR-----EIGYEDVYFNTLRAEDYGNPSVRRRVFV 223
>sp|P29567|MTHT_METTF Modification methylase MthTI OS=Methanobacterium thermoformicicum
GN=mthTIM PE=3 SV=1
Length = 330
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 76/191 (39%), Gaps = 36/191 (18%)
Query: 491 WEPIEGLSNCGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLAD 550
W+ E N G KI + K +P DV GGPPCQ S D+P
Sbjct: 37 WKTFE--KNHGIKINKKPIEWLKPSEIP---DVVGFIGGPPCQSWSLAGSMCGADDP--- 88
Query: 551 EKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAG 610
+ K ++D+V P F L ENV IV + + I + Y V ++ A
Sbjct: 89 -RGKTFYAYVDLVKEKDPLFFLAENVPGIVSRTHLPEFKRLVNSFIDIGYNVEYKVLNAK 147
Query: 611 AYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARK 670
YG+PQ R RVF+ G + D+ L+ P L +K
Sbjct: 148 DYGVPQDRKRVFIVGYR------------EDLNLKFEFPK---------------PLNKK 180
Query: 671 LLLQDAISDLP 681
+ L+DAI DLP
Sbjct: 181 VTLRDAIGDLP 191
>sp|P34877|MTSA_LACLC Modification methylase ScrFIA OS=Lactococcus lactis subsp. cremoris
GN=scrFIAM PE=3 SV=1
Length = 389
Score = 53.1 bits (126), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 4/104 (3%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
D D++ GG PCQ S K D + I+ +PK L+ENV ++
Sbjct: 139 DHDILVGGFPCQAFSQ----AGKKLGFDDTRGTLFFEIARIIKEKRPKAFLLENVKNLKT 194
Query: 582 FAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWG 625
KG + L L +++Y+V + A +GLPQ R R+++ G
Sbjct: 195 HDKGRTFKTILNTLEELDYEVHTALFKARDFGLPQNRERIYIVG 238
>sp|P17044|MTBF_BACIU Modification methylase BsuFI OS=Bacillus subtilis GN=hsdFM PE=3
SV=1
Length = 409
Score = 53.1 bits (126), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 76/183 (41%), Gaps = 23/183 (12%)
Query: 481 WRNYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKI----LPLPGDVDVICGGPPCQGVS 536
W Y + T+E +N GEK HG +KI +P D DV+ G PCQ S
Sbjct: 130 WDKY--AAQTYE-----ANYGEK-----PHGDITKINENDIP---DQDVLLAGFPCQPFS 174
Query: 537 GFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLI 596
K A E+ + + I+ +PK L+ENV ++ G R L L
Sbjct: 175 NIG----KREGFAHERRNIIFDVLRILKKKQPKMFLLENVKGLLTNDNGNTFRVILDNLK 230
Query: 597 QMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNT 656
+ Y V +M A +GLPQ R R+ + G P + ++ P + + I E N
Sbjct: 231 SLGYSVFYEVMDAQNFGLPQRRERIVIVGFHPDLGINDFSFPKGNPDNKVPINAILEHNP 290
Query: 657 VAY 659
Y
Sbjct: 291 TGY 293
>sp|P09795|MTS1_SALIN Modification methylase SinI OS=Salmonella infantis GN=sinIM PE=3
SV=1
Length = 461
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 68/151 (45%), Gaps = 31/151 (20%)
Query: 516 ILPLPG-----DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKF 570
IL L G ++D+I GGPPCQ S K L DE+ I ++D+ ++PK+
Sbjct: 133 ILKLAGVSSGNEIDLIMGGPPCQAFST----AGKRLGLEDERGNVFIKYLDVALDIRPKY 188
Query: 571 VLMENVVDIVKF----------AKGL-----------LGRYALARLIQMNYQVRMGMMAA 609
+++ENV ++ +GL + Y + + Y V + +
Sbjct: 189 IVIENVRGLLSAPMKHRPHNERGEGLPPLKSEEQPGGVLHYIIRIIKSAGYSVSFNLYNS 248
Query: 610 GAYGLPQFRMRVFLWGAQPTEKLPPYALPTH 640
+G+PQ R RV + ++ ++ P+ PTH
Sbjct: 249 ANFGVPQIRERVIIICSRDGSRV-PFLQPTH 278
>sp|P25282|MTG1_HAEGA Modification methylase HgaIA OS=Haemophilus gallinarum GN=hgaIAM
PE=3 SV=2
Length = 357
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 5/112 (4%)
Query: 517 LPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
+ L VD + PPCQG+S + R+ N D +N ++ + ++ LKP ++L+ENV
Sbjct: 68 IALTNQVDFLIASPPCQGMSVAGKNRDVSNMANDNRNYLIMYVIAMIKKLKPAYILIENV 127
Query: 577 VDIVKFAKGLLGRYALARLIQMN-----YQVRMGMMAAGAYGLPQFRMRVFL 623
++K + + + I + Y + ++ A YG PQ R R +
Sbjct: 128 PFLLKLELYIDNKLTPIKNILEDEFGSEYHIHFDILDAADYGTPQRRKRAII 179
>sp|P23737|MTS9_STAAU Modification methylase Sau96I OS=Staphylococcus aureus GN=sau96IM
PE=3 SV=1
Length = 430
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 66/149 (44%), Gaps = 10/149 (6%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
++D++ GG PCQ S + K N AD + + I+ LKPK + ENV +V
Sbjct: 164 EIDILSGGYPCQTFS----YAGKRNGFADTRGTLFYPYSKILSKLKPKAFIAENVRGLVN 219
Query: 582 FAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQP---TEKLPPYALP 638
G L I+ Y+V ++ + Y + Q R R+ + G + E+ P+ P
Sbjct: 220 HDDGKTLEVMLKVFIKEGYEVYWNILNSWNYDVAQKRERIVIIGIREDLVKEQKYPFRFP 279
Query: 639 THDV---VLRGVIPTEFERNTVAYDEGQQ 664
V VL+ V+ + AY + ++
Sbjct: 280 LAQVYKPVLKDVLKDVPKSKVTAYSDKKR 308
>sp|P08455|MTP2_NEIGO Modification methylase NgoPII OS=Neisseria gonorrhoeae GN=ngoPIIM
PE=3 SV=2
Length = 330
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 53/113 (46%), Gaps = 16/113 (14%)
Query: 519 LPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVD 578
P ++D I GGPPCQ S R D D + + ++ I+ +PKF L ENV
Sbjct: 60 FPEEIDGIIGGPPCQSWSEAGALRGID----DARGQLFFDYIRILKSKQPKFFLAENVSG 115
Query: 579 IVKFAKGLLGRY--ALARLIQM----NYQVRMGMMAAGAYGLPQFRMRVFLWG 625
+ L R+ A+ L++M Y V + M A YG+ Q R RVF G
Sbjct: 116 M------LANRHNGAVQNLLKMFDGCGYDVTLTMANAKDYGVAQERKRVFYIG 162
Score = 33.5 bits (75), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 11/66 (16%)
Query: 339 VKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPET-----EVRN 393
+K++ L+SGCG GL LG AG + D +A + K NHP+T ++R
Sbjct: 1 MKIISLFSGCG----GLDLGFEKAGFEIPAANEYDKTIWA--TFKANHPKTHLIEGDIRK 54
Query: 394 ESAEDF 399
EDF
Sbjct: 55 IKEEDF 60
>sp|Q8EL95|MT36_OCEIH Putative modification methylase OB3336 OS=Oceanobacillus iheyensis
(strain DSM 14371 / JCM 11309 / KCTC 3954 / HTE831)
GN=OB3336 PE=3 SV=1
Length = 460
Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 89/213 (41%), Gaps = 35/213 (16%)
Query: 525 VICGGPPCQGVSGFNRF--------RNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576
++ GGPPCQ S R R ++N D + K F+D + ++MENV
Sbjct: 90 IVIGGPPCQAYSKIGRAKLKSLGEERRQEN---DARGKLYENFLDYALHVDANVIVMENV 146
Query: 577 VDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGA---------- 626
+ V + + LI Y ++ A +G+PQ R+R+F+
Sbjct: 147 PEAVNYGGVNIPDTVCDILINKGYDAIWTVLNAADFGVPQTRVRLFVMAIKKDIGKIKFI 206
Query: 627 -QPTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAE--LARKLLLQDAISDLPSV 683
+PT K P + V +R + +E RN+ Y + + L+ + + DAI DLP++
Sbjct: 207 PEPTHK-PHINVKRQSVNVRW-MQSEI-RNSKYYKQPNIPDETLSDWVTVGDAIGDLPNL 263
Query: 684 --------DNYESRDEIPYDREPETEFQCFIRL 708
NY+ Y P+ FQ +R+
Sbjct: 264 FPVYNQKYKNYKPMMMKEYKSPPQNTFQKLMRI 296
>sp|Q3TYA6|MPP8_MOUSE M-phase phosphoprotein 8 OS=Mus musculus GN=Mphosph8 PE=1 SV=1
Length = 858
Score = 50.4 bits (119), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 38/66 (57%), Gaps = 8/66 (12%)
Query: 443 VEDESEDDSEIFEVEKILKI-CYGDPKEIKKRGLYLKVRWRNYGPSEDTWEPIEGLSNCG 501
V D ED ++FEVE+IL + C G + LY KVRW+ Y +DTWEP L +C
Sbjct: 48 VGDSEEDGEDVFEVERILDMKCEGG------KNLY-KVRWKGYTSEDDTWEPEVHLEDCK 100
Query: 502 EKIKEF 507
E + EF
Sbjct: 101 EVLLEF 106
>sp|G3V8T1|MPP8_RAT M-phase phosphoprotein 8 OS=Rattus norvegicus GN=Mphosph8 PE=2 SV=1
Length = 851
Score = 50.4 bits (119), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 38/66 (57%), Gaps = 8/66 (12%)
Query: 443 VEDESEDDSEIFEVEKILKI-CYGDPKEIKKRGLYLKVRWRNYGPSEDTWEPIEGLSNCG 501
V D ED ++FEVE+IL + C G + LY KVRW+ Y +DTWEP L +C
Sbjct: 48 VGDSEEDGEDVFEVERILDMKCEGG------KNLY-KVRWKGYTSDDDTWEPEVHLEDCK 100
Query: 502 EKIKEF 507
E + EF
Sbjct: 101 EVLLEF 106
>sp|P25265|MTD2_HERAU Modification methylase HgiDII OS=Herpetosiphon aurantiacus
GN=hgiDIIM PE=3 SV=1
Length = 354
Score = 50.1 bits (118), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 69/149 (46%), Gaps = 7/149 (4%)
Query: 525 VICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAK 584
++ G PCQ F+++ K K + L F ++ ++P + MENV ++ F +
Sbjct: 72 ILVGCAPCQD---FSQYTKKSR--TGTKWQLLTEFSRLIREIEPDIISMENVPEVRTFNR 126
Query: 585 GLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQP--TEKLPPYALPTHDV 642
G + + L Q+ Y V ++ YG+PQ R R+ L+ A+ + +PP P +
Sbjct: 127 GEVFNNFIQSLEQLGYHVSHSVVHCPDYGIPQQRDRLVLFAAKQGVIKIIPPTHTPENYR 186
Query: 643 VLRGVIPTEFERNTVAYDEGQQAELARKL 671
+R VI + + + EG A +L
Sbjct: 187 TVRDVIGSLATNYSGGHWEGDSMHAASRL 215
>sp|P16668|MTS3_STAAU Modification methylase Sau3AI OS=Staphylococcus aureus GN=sau3AIM
PE=3 SV=1
Length = 412
Score = 50.1 bits (118), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 70/143 (48%), Gaps = 17/143 (11%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLK---PKFVLMENVVD 578
+ D+I GG PCQ S R+ + L + K+ ++F I+ +++ PK++L+ENV
Sbjct: 75 EADMIVGGFPCQDYS---VARSLNGELGIQ-GKKGVLFWQIIRYIQNTFPKYLLLENVDR 130
Query: 579 IVKFAKGLLGR---YALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWG-------AQP 628
++K GR L+ L ++ Y V ++ A YG Q R RVF++G ++
Sbjct: 131 LLKSPSSQRGRDFAVMLSTLNELGYNVEWRVINAADYGNAQRRRRVFIFGYKQDLNYSKA 190
Query: 629 TEKLPPYALPTHDVVLRGVIPTE 651
E+ P + H+ + P E
Sbjct: 191 MEESPLDKIIYHNGLFAEAFPIE 213
>sp|P50185|MTD5_DACSA Modification methylase DsaV OS=Dactylococcopsis salina GN=dsaVM
PE=3 SV=1
Length = 351
Score = 49.7 bits (117), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 524 DVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFA 583
D++ G PCQ S R DE+ + I++ +P+ +L+ENV +
Sbjct: 67 DLLLAGFPCQAFSQGGR----KQGFQDERGQLFFQVAKILNDHRPQAILLENVKGLRGHD 122
Query: 584 KGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQ 627
KG + L L ++NY V +++A + LPQ R R+F+ G Q
Sbjct: 123 KGRTLQMILYVLEKLNYVVSWKIISATDFNLPQKRERIFIVGFQ 166
>sp|P34906|MTF1_FUSNU Modification methylase FnuDI OS=Fusobacterium nucleatum GN=fnuDIM
PE=3 SV=1
Length = 344
Score = 49.3 bits (116), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 57/122 (46%), Gaps = 18/122 (14%)
Query: 524 DVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFA 583
D I GGPPCQ S R ++P + K ++ I+ ++PKF L ENV
Sbjct: 63 DGIIGGPPCQSWSEAGSLRGINDP----RGKLFYEYIRILKDIQPKFFLAENV------- 111
Query: 584 KGLLGRY---ALARLI----QMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYA 636
KG+L + A+ +I + Y V + ++ A YG+ Q R RVF G + + +
Sbjct: 112 KGMLSKRNTEAVKDIIKEFEEAGYNVFIKLLNAFDYGVAQDRERVFYVGFRKDLNISNFE 171
Query: 637 LP 638
P
Sbjct: 172 FP 173
>sp|P45968|YNZ8_CAEEL Chromo domain-containing protein T09A5.8 OS=Caenorhabditis elegans
GN=T09A5.8 PE=4 SV=1
Length = 339
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 29/53 (54%), Gaps = 6/53 (11%)
Query: 452 EIFEVEKILKICYGDPKEIKKRGLYLKVRWRNYGPSEDTWEPIEGLSNCGEKI 504
EIFEVEKIL D L L+VRW YG EDTWEP E L C ++
Sbjct: 22 EIFEVEKILAHKVTD------NLLVLQVRWLGYGADEDTWEPEEDLQECASEV 68
>sp|Q99549|MPP8_HUMAN M-phase phosphoprotein 8 OS=Homo sapiens GN=MPHOSPH8 PE=1 SV=2
Length = 860
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Query: 445 DESEDDSEIFEVEKILKICYGDPKEIKKRGLYLKVRWRNYGPSEDTWEPIEGLSNCGEKI 504
D ED ++FEVEKIL D K + LY KVRW+ Y +DTWEP L +C E +
Sbjct: 50 DSEEDGEDVFEVEKIL-----DMKTEGGKVLY-KVRWKGYTSDDDTWEPEIHLEDCKEVL 103
Query: 505 KEF 507
EF
Sbjct: 104 LEF 106
>sp|O34939|YDIO_BACSU Probable BsuMI modification methylase subunit YdiO OS=Bacillus
subtilis (strain 168) GN=ydiO PE=2 SV=1
Length = 427
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 5/105 (4%)
Query: 523 VDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKF 582
+D I GPPCQG S N + +P +N L+ +++ +P VL+ENV I+
Sbjct: 167 IDFILAGPPCQGHSDLNNHTRRKDP----RNALLMRVSRVIELFQPSSVLVENVPGIIHD 222
Query: 583 AKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQ 627
G + L Y ++ A G+ Q R R F++ ++
Sbjct: 223 KSGSFKEFK-NHLKTQGYYFDEIVLNAEKLGVSQARRRYFIFASK 266
Score = 37.0 bits (84), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 29/59 (49%)
Query: 339 VKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAE 397
+ + DL+SGCG +S G+ G+N +A D+NE A + N NES E
Sbjct: 84 INIADLFSGCGGLSLGVWEACRALGINPRFSFACDLNEAALSVYEKNFSPDFSLNESIE 142
>sp|P19888|MTBA_BACAR Modification methylase BanI OS=Bacillus aneurinolyticus GN=banIM
PE=1 SV=1
Length = 428
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 50/104 (48%), Gaps = 4/104 (3%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
+ D + G PCQ S + K D + ++ +PK L+ENV +V
Sbjct: 66 EFDFLLAGFPCQPFS----YAGKQQGFGDTRGTLFFEVERVLRDNRPKAFLLENVRGLVT 121
Query: 582 FAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWG 625
KG + +++L ++ Y V ++ + +G+PQ R+R+++ G
Sbjct: 122 HDKGRTLKTIISKLEELGYGVSYLLLNSSTFGVPQNRVRIYILG 165
>sp|P20589|MTH3_HAEAE Modification methylase HaeIII OS=Haemophilus aegyptius GN=haeIIIM
PE=1 SV=1
Length = 330
Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 54/121 (44%), Gaps = 21/121 (17%)
Query: 524 DVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFA 583
D I GGPPCQ S R D+P + K ++ I+ KP F L ENV
Sbjct: 63 DGIIGGPPCQSWSEGGSLRGIDDP----RGKLFYEYIRILKQKKPIFFLAENV------- 111
Query: 584 KGLLGRY---ALARLIQ----MNYQVRMGMMAAGAYGLPQFRMRVFLWGAQP---TEKLP 633
KG++ + A+ IQ Y V + ++ A YG+ Q R RVF G + LP
Sbjct: 112 KGMMAQRHNKAVQEFIQEFDNAGYDVHIILLNANDYGVAQDRKRVFYIGFRKELNINYLP 171
Query: 634 P 634
P
Sbjct: 172 P 172
>sp|P05102|MTH1_HAEPH Modification methylase HhaI OS=Haemophilus parahaemolyticus
GN=hhaIM PE=1 SV=1
Length = 327
Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 53/125 (42%), Gaps = 8/125 (6%)
Query: 499 NCGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIV 558
N GEK + +T K +P D D++C G PCQ S K D +
Sbjct: 52 NFGEKPEGDITQ-VNEKTIP---DHDILCAGFPCQAFS----ISGKQKGFEDSRGTLFFD 103
Query: 559 FMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFR 618
IV KPK V MENV + G + +++Y ++ A YG+PQ R
Sbjct: 104 IARIVREKKPKVVFMENVKNFASHDNGNTLEVVKNTMNELDYSFHAKVLNALDYGIPQKR 163
Query: 619 MRVFL 623
R+++
Sbjct: 164 ERIYM 168
>sp|P34879|MTS2_SHISO Modification methylase SsoII OS=Shigella sonnei GN=ssoIIM PE=3 SV=1
Length = 379
Score = 47.0 bits (110), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 50/113 (44%), Gaps = 22/113 (19%)
Query: 522 DVDVICGGPPCQGVS------GFNRFRNKDNPLADEKNKQLIVFMDIVDFLK---PKFVL 572
D +++ GG PC S GFN R +F DI +K P L
Sbjct: 132 DHEILVGGFPCVAFSQAGLKKGFNDTRG-------------TLFFDIARIIKEKKPHAFL 178
Query: 573 MENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWG 625
+ENV +++ KG L ++NY V + AA +G+PQ R R+++ G
Sbjct: 179 LENVKNLLGHDKGRTFSIIKNTLEELNYTVYYNIFAAKDFGVPQNRERIYIVG 231
>sp|P25263|MTC1_HERAU Modification methylase HgiCI OS=Herpetosiphon aurantiacus GN=hgiCIM
PE=3 SV=2
Length = 420
Score = 46.6 bits (109), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 73/163 (44%), Gaps = 14/163 (8%)
Query: 524 DVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFA 583
D + G PCQ S + K D + I+ +PK L+ENV +
Sbjct: 67 DFLLAGFPCQPFS----YAGKQKGFGDTRGTLFFEIERILKAYRPKGFLLENVRGLTTHD 122
Query: 584 KGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVV 643
KG + L +L ++NY V + ++ + + +PQ R+RV++ G ++ P + +H
Sbjct: 123 KGRTFKTILQKLHELNYGVYL-ILNSSNFQVPQNRLRVYIVGLDQSQ--PELTITSH--- 176
Query: 644 LRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLPSVDNY 686
+ T+ + ++ + + +L++D + D P +D Y
Sbjct: 177 ---IGATDSHKFKQLSNQASLFDTNKIMLVRDILEDHP-LDKY 215
>sp|P11408|MTM1_MORSP Modification methylase MspI OS=Moraxella sp. GN=mspIM PE=3 SV=1
Length = 418
Score = 46.6 bits (109), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 9/103 (8%)
Query: 524 DVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPK---FVLMENVVDIV 580
D++C G PCQ S + ++P Q +F +IV ++ K + +ENV ++
Sbjct: 166 DILCAGFPCQPFSHIGKREGFEHP------TQGTMFHEIVRIIETKKTPVLFLENVPGLI 219
Query: 581 KFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFL 623
G + + L M Y+V ++ A +G+PQ R R +L
Sbjct: 220 NHDDGNTLKVIIETLEDMGYKVHHTVLDASHFGIPQKRKRFYL 262
>sp|P10283|MTB1_BREEP Modification methylase BepI OS=Brevibacterium epidermidis GN=bepIM
PE=3 SV=1
Length = 403
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 65/137 (47%), Gaps = 26/137 (18%)
Query: 508 VTHGFKSKILPLPGDVDVICGGPPCQGVS------GFNRFRNKDNPLADEKNK----QLI 557
V + ++K P D+DV+ GG PCQ S GF+ ++ + + +E + QL
Sbjct: 91 VVNNIENKQFSFPNDIDVVTGGFPCQDFSFAGKRKGFDSHKDHNGIIYNEPTEATRGQLY 150
Query: 558 VFM-DIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQ--------VRMGMMA 608
+++ +V+ KPK + ENV KGL+ + +IQ +++ + ++
Sbjct: 151 LWLKKVVEITKPKVFIAENV-------KGLVTLGDVKDIIQKDFRNIDDGYVVLDAQVLN 203
Query: 609 AGAYGLPQFRMRVFLWG 625
A YG+ Q R RV G
Sbjct: 204 AKNYGVAQNRERVIFIG 220
>sp|P24581|MTNX_NEILA Cytosine-specific methyltransferase NlaX OS=Neisseria lactamica
GN=nlaXM PE=3 SV=1
Length = 313
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 10/107 (9%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFL---KPKFVLMENVVD 578
D D++ G PCQ S + AD + +F DI L KP+ L+ENV
Sbjct: 64 DHDILSAGFPCQPFSQAGLKKG----FADTRGT---LFFDIERILLAKKPQAFLLENVKQ 116
Query: 579 IVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWG 625
+ KG + LA L Q Y+V ++ A +G+PQ R R++L G
Sbjct: 117 LKGHDKGRTLQVILAHLQQAGYKVYTEVLKARDFGIPQNRERIYLVG 163
>sp|Q8N8U2|CDYL2_HUMAN Chromodomain Y-like protein 2 OS=Homo sapiens GN=CDYL2 PE=1 SV=2
Length = 506
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 5/56 (8%)
Query: 452 EIFEVEKILKICYGDPKEIKKRGLYLKVRWRNYGPSEDTWEPIEGLSNCGEKIKEF 507
+++EVE+I+ D ++ KK +RW+ YG +EDTWEP L +C E I EF
Sbjct: 5 DLYEVERIV-----DKRKNKKGKWEYLIRWKGYGSTEDTWEPEHHLLHCEEFIDEF 55
>sp|P25283|MTG2_HAEGA Modification methylase HgaIB OS=Haemophilus gallinarum GN=hgaIBM
PE=3 SV=1
Length = 358
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 57/119 (47%), Gaps = 7/119 (5%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
+V + PPCQG+S + +++D+ + D +N + + +D L F+L+ENV ++
Sbjct: 71 NVKFLLATPPCQGLSSVGKNKHQDHFIKDNRNFLIFEVFEFIDVLNLDFILIENVPRFIE 130
Query: 582 FAKGLLGRYALARLIQM-----NYQVRMGMMAAGAYGLPQFRMRVF--LWGAQPTEKLP 633
G+ L I YQ+ + ++ A YG+ Q R R ++ T KLP
Sbjct: 131 MYFPYNGQLLLLEEILKIKYASKYQIDIVILNAKDYGICQSRPRAIIKMYKYGITWKLP 189
>sp|Q59603|MTB1_NEIGO Modification methylase NgoBI OS=Neisseria gonorrhoeae GN=ngoBIM
PE=3 SV=2
Length = 317
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 45/104 (43%), Gaps = 4/104 (3%)
Query: 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVK 581
D D++ G PCQ S K D + +I+ +PK L+ENV +
Sbjct: 61 DHDILLAGFPCQPFS----IAGKGLGFEDTRGTLFFNIAEILKTKQPKAFLLENVKRLTT 116
Query: 582 FAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWG 625
G R L L Q+ Y V ++ +GLPQ R R+++ G
Sbjct: 117 HDSGRTFRIVLETLKQLGYTVYFKVLNTLDFGLPQKRERIYIVG 160
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.134 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 285,345,350
Number of Sequences: 539616
Number of extensions: 13089475
Number of successful extensions: 65686
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 211
Number of HSP's that attempted gapping in prelim test: 64298
Number of HSP's gapped (non-prelim): 1299
length of query: 718
length of database: 191,569,459
effective HSP length: 125
effective length of query: 593
effective length of database: 124,117,459
effective search space: 73601653187
effective search space used: 73601653187
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)