Query 047980
Match_columns 718
No_of_seqs 444 out of 2419
Neff 6.1
Searched_HMMs 29240
Date Mon Mar 25 08:28:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047980.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047980hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4ft4_B DNA (cytosine-5)-methyl 100.0 1.4E-97 5E-102 884.2 38.2 565 128-715 2-572 (784)
2 3swr_A DNA (cytosine-5)-methyl 100.0 2E-75 6.9E-80 699.1 44.3 496 96-710 68-806 (1002)
3 3av4_A DNA (cytosine-5)-methyl 100.0 1.3E-72 4.5E-77 688.2 32.2 496 97-710 380-1117(1330)
4 3g7u_A Cytosine-specific methy 100.0 3.7E-47 1.3E-51 416.2 20.0 228 337-709 1-233 (376)
5 3ubt_Y Modification methylase 100.0 6.3E-46 2.2E-50 397.5 15.8 169 339-634 1-169 (331)
6 2c7p_A Modification methylase 100.0 4E-42 1.4E-46 369.9 17.8 179 335-641 8-188 (327)
7 3qv2_A 5-cytosine DNA methyltr 100.0 9.9E-40 3.4E-44 351.1 18.0 178 335-641 7-190 (327)
8 4h0n_A DNMT2; SAH binding, tra 100.0 1.7E-39 5.7E-44 350.2 18.7 170 337-631 2-172 (333)
9 1g55_A DNA cytosine methyltran 100.0 9E-39 3.1E-43 345.9 17.5 178 338-641 2-181 (343)
10 4dkj_A Cytosine-specific methy 100.0 3.4E-39 1.2E-43 355.4 11.6 115 520-641 123-248 (403)
11 3me5_A Cytosine-specific methy 100.0 5.1E-38 1.7E-42 352.8 15.8 189 336-631 86-291 (482)
12 2qrv_A DNA (cytosine-5)-methyl 100.0 4E-35 1.4E-39 311.0 14.4 166 333-629 11-183 (295)
13 1w4s_A Polybromo, polybromo 1 99.9 2.4E-28 8.1E-33 240.3 8.4 134 172-309 11-146 (174)
14 2pv0_B DNA (cytosine-5)-methyl 99.9 4.8E-27 1.6E-31 253.4 8.3 98 521-641 236-340 (386)
15 2qrv_B DNA (cytosine-5)-methyl 99.9 8.7E-27 3E-31 236.5 8.7 98 521-641 80-184 (230)
16 4dov_A ORC1, origin recognitio 99.8 9.1E-20 3.1E-24 174.2 15.8 130 175-308 21-163 (163)
17 3swr_A DNA (cytosine-5)-methyl 99.8 1.1E-19 3.6E-24 218.5 15.3 138 174-312 321-508 (1002)
18 3av4_A DNA (cytosine-5)-methyl 99.7 3E-18 1E-22 210.4 13.6 136 174-310 633-817 (1330)
19 2fl7_A Regulatory protein SIR3 98.9 4.6E-09 1.6E-13 106.2 9.4 120 184-306 49-191 (232)
20 1m4z_A Origin recognition comp 98.9 4.1E-09 1.4E-13 106.9 8.9 121 184-307 49-192 (238)
21 2igt_A SAM dependent methyltra 98.6 2E-07 6.7E-12 100.1 14.2 97 521-626 224-323 (332)
22 3c0k_A UPF0064 protein YCCW; P 98.0 3.2E-05 1.1E-09 84.4 13.2 56 337-398 220-282 (396)
23 2rso_A Chromatin-associated pr 97.6 5.6E-06 1.9E-10 72.7 -1.5 57 449-509 26-83 (92)
24 2rsn_A Chromo domain-containin 97.5 3.9E-06 1.3E-10 71.0 -3.0 54 450-508 18-71 (75)
25 1g6z_A CLR4 protein; transfera 97.5 6.1E-06 2.1E-10 68.8 -2.3 57 453-514 8-65 (70)
26 1wy7_A Hypothetical protein PH 97.5 0.00069 2.4E-08 66.0 11.5 45 337-387 49-93 (207)
27 3cgg_A SAM-dependent methyltra 97.4 0.0024 8.3E-08 60.6 14.2 52 336-394 45-96 (195)
28 4hae_A CDY-like 2, chromodomai 97.3 5.2E-06 1.8E-10 71.3 -4.7 51 452-507 22-72 (81)
29 2frn_A Hypothetical protein PH 97.2 0.00089 3.1E-08 69.4 9.6 44 337-386 125-168 (278)
30 3lwe_A M-phase phosphoprotein 97.2 6.3E-06 2.1E-10 67.1 -5.5 51 453-509 4-54 (62)
31 3fdt_A Chromobox protein homol 97.1 9E-06 3.1E-10 65.5 -5.2 50 453-509 3-52 (59)
32 3ajd_A Putative methyltransfer 97.1 0.0019 6.5E-08 66.7 10.4 57 337-398 83-145 (274)
33 3f2u_A Chromobox protein homol 97.1 1.5E-05 5E-10 63.4 -4.4 49 454-509 3-51 (55)
34 2b78_A Hypothetical protein SM 97.1 0.0031 1.1E-07 68.7 12.3 57 337-399 212-275 (385)
35 3gdh_A Trimethylguanosine synt 97.0 0.0028 9.6E-08 63.3 10.8 43 337-386 78-120 (241)
36 2yxd_A Probable cobalt-precorr 97.0 0.0095 3.3E-07 55.9 13.7 43 337-386 35-77 (183)
37 2as0_A Hypothetical protein PH 97.0 0.0043 1.5E-07 67.5 12.6 44 337-386 217-260 (396)
38 1ap0_A Modifier protein 1; chr 97.0 4.3E-05 1.5E-09 64.2 -2.6 51 452-509 12-62 (73)
39 1ne2_A Hypothetical protein TA 96.9 0.0035 1.2E-07 60.8 10.2 51 337-393 51-101 (200)
40 3lpm_A Putative methyltransfer 96.9 0.0066 2.3E-07 61.8 12.6 44 337-386 49-92 (259)
41 4dmg_A Putative uncharacterize 96.9 0.0048 1.6E-07 67.6 11.8 42 338-386 215-256 (393)
42 1wxx_A TT1595, hypothetical pr 96.9 0.009 3.1E-07 64.7 13.9 56 337-399 209-269 (382)
43 2dnt_A Chromodomain protein, Y 96.8 5.1E-05 1.8E-09 64.5 -3.3 55 452-511 12-66 (78)
44 1q3l_A Heterochromatin protein 96.8 2.7E-05 9.4E-10 64.7 -5.0 51 452-509 15-65 (69)
45 3g7l_A Chromo domain-containin 96.8 3.5E-05 1.2E-09 62.5 -4.5 51 452-509 6-57 (61)
46 2dnv_A Chromobox protein homol 96.8 7.8E-05 2.7E-09 61.0 -2.6 50 452-508 9-58 (64)
47 2k1b_A Chromobox protein homol 96.8 5E-05 1.7E-09 63.8 -4.0 51 452-509 20-70 (73)
48 1pdq_A Polycomb protein; methy 96.7 4.3E-05 1.5E-09 64.0 -4.7 50 452-508 19-68 (72)
49 3evz_A Methyltransferase; NYSG 96.6 0.028 9.6E-07 55.4 13.8 44 336-386 54-99 (230)
50 2d9u_A Chromobox protein homol 96.3 0.00022 7.4E-09 60.1 -3.0 54 452-512 9-62 (74)
51 1uwv_A 23S rRNA (uracil-5-)-me 96.3 0.023 7.9E-07 62.7 12.3 43 337-386 286-328 (433)
52 3q87_B N6 adenine specific DNA 96.2 0.079 2.7E-06 50.2 14.1 36 338-381 24-59 (170)
53 2fpo_A Methylase YHHF; structu 96.0 0.0073 2.5E-07 59.2 6.1 57 337-399 54-115 (202)
54 2f8l_A Hypothetical protein LM 96.0 0.086 3E-06 56.0 14.7 49 336-385 129-178 (344)
55 3a27_A TYW2, uncharacterized p 96.0 0.041 1.4E-06 56.7 11.6 44 337-386 119-163 (272)
56 3mti_A RRNA methylase; SAM-dep 96.0 0.036 1.2E-06 52.6 10.5 43 337-386 22-64 (185)
57 1y8c_A S-adenosylmethionine-de 95.9 0.11 3.7E-06 51.1 14.0 44 337-387 37-80 (246)
58 2kvm_A Chromobox protein homol 95.9 0.00028 9.7E-09 59.3 -4.1 50 453-509 13-62 (74)
59 3v97_A Ribosomal RNA large sub 95.9 0.017 5.8E-07 67.9 9.3 44 337-386 539-582 (703)
60 2ift_A Putative methylase HI07 95.9 0.0089 3E-07 58.5 5.9 57 337-399 53-116 (201)
61 3p9n_A Possible methyltransfer 95.9 0.0096 3.3E-07 57.2 6.0 58 337-400 44-106 (189)
62 3m4x_A NOL1/NOP2/SUN family pr 95.9 0.016 5.4E-07 64.7 8.5 46 336-385 104-149 (456)
63 3m6w_A RRNA methylase; rRNA me 95.8 0.043 1.5E-06 61.4 11.8 47 336-386 100-146 (464)
64 3k6r_A Putative transferase PH 95.7 0.0065 2.2E-07 63.5 4.3 43 337-385 125-167 (278)
65 2jjq_A Uncharacterized RNA met 95.7 0.018 6.2E-07 63.6 7.9 43 337-386 290-332 (425)
66 3i91_A Chromobox protein homol 95.6 0.0028 9.6E-08 49.9 0.9 35 472-507 16-50 (54)
67 1ixk_A Methyltransferase; open 95.6 0.018 6.1E-07 60.8 7.3 47 336-386 117-163 (315)
68 3mts_A Histone-lysine N-methyl 95.6 0.0031 1E-07 51.5 1.0 37 472-509 13-49 (64)
69 1yzh_A TRNA (guanine-N(7)-)-me 95.5 0.03 1E-06 54.9 8.1 45 337-386 41-85 (214)
70 3bt7_A TRNA (uracil-5-)-methyl 95.5 0.014 4.8E-07 63.0 6.0 55 339-400 215-274 (369)
71 1ws6_A Methyltransferase; stru 95.4 0.021 7.1E-07 53.1 6.4 57 337-400 41-101 (171)
72 3eey_A Putative rRNA methylase 95.3 0.15 5.1E-06 48.8 12.2 45 336-386 21-67 (197)
73 3e05_A Precorrin-6Y C5,15-meth 95.2 0.19 6.5E-06 48.5 12.8 44 336-386 39-84 (204)
74 3h91_A Chromobox protein homol 95.2 0.0045 1.6E-07 48.7 0.9 35 472-507 16-50 (54)
75 1pfb_A Polycomb protein; chrom 95.2 0.0052 1.8E-07 48.5 1.2 48 454-508 4-51 (55)
76 3axs_A Probable N(2),N(2)-dime 95.2 0.019 6.6E-07 62.8 6.1 59 337-400 52-118 (392)
77 2ozv_A Hypothetical protein AT 95.1 0.19 6.4E-06 51.2 12.9 47 337-388 36-82 (260)
78 1nv8_A HEMK protein; class I a 95.0 0.033 1.1E-06 57.9 6.9 44 337-386 123-166 (284)
79 2esr_A Methyltransferase; stru 95.0 0.026 8.9E-07 53.3 5.6 57 337-399 31-93 (177)
80 2frx_A Hypothetical protein YE 95.0 0.068 2.3E-06 59.9 9.8 46 337-386 117-162 (479)
81 3lcc_A Putative methyl chlorid 94.9 0.32 1.1E-05 47.9 13.5 43 339-388 68-110 (235)
82 3e23_A Uncharacterized protein 94.8 0.23 7.7E-06 48.1 12.1 43 337-386 43-85 (211)
83 3tm4_A TRNA (guanine N2-)-meth 94.8 0.15 5.3E-06 54.9 11.8 44 336-386 216-261 (373)
84 3e8s_A Putative SAM dependent 94.8 0.56 1.9E-05 45.2 14.9 54 337-398 52-105 (227)
85 3dtn_A Putative methyltransfer 94.7 0.16 5.6E-06 49.8 10.8 48 336-388 43-90 (234)
86 2b9e_A NOL1/NOP2/SUN domain fa 94.6 0.057 2E-06 57.0 7.5 47 336-386 101-147 (309)
87 1l3i_A Precorrin-6Y methyltran 94.6 0.36 1.2E-05 45.1 12.5 44 336-386 32-75 (192)
88 2fhp_A Methylase, putative; al 94.5 0.039 1.3E-06 52.1 5.6 57 337-399 44-106 (187)
89 2b3t_A Protein methyltransfera 94.4 0.051 1.8E-06 55.6 6.4 45 337-386 109-153 (276)
90 3ll7_A Putative methyltransfer 94.3 0.032 1.1E-06 61.4 4.8 57 338-401 94-157 (410)
91 1inl_A Spermidine synthase; be 94.2 0.71 2.4E-05 48.0 14.8 45 338-387 91-135 (296)
92 2dul_A N(2),N(2)-dimethylguano 94.2 0.057 2E-06 58.7 6.6 58 337-400 47-125 (378)
93 4dzr_A Protein-(glutamine-N5) 93.9 0.053 1.8E-06 52.1 5.1 48 336-388 29-76 (215)
94 2fca_A TRNA (guanine-N(7)-)-me 93.9 0.37 1.3E-05 47.3 11.4 44 337-385 38-81 (213)
95 3tma_A Methyltransferase; thum 93.8 0.13 4.4E-06 54.8 8.3 45 336-386 202-248 (354)
96 1m6y_A S-adenosyl-methyltransf 93.6 0.091 3.1E-06 55.4 6.7 61 337-403 26-91 (301)
97 2r6z_A UPF0341 protein in RSP 93.6 0.089 3E-06 54.0 6.5 57 337-400 83-152 (258)
98 3dmg_A Probable ribosomal RNA 93.6 0.11 3.9E-06 56.3 7.6 43 337-386 233-275 (381)
99 3h2b_A SAM-dependent methyltra 93.5 0.079 2.7E-06 51.0 5.6 54 338-398 42-95 (203)
100 2yxl_A PH0851 protein, 450AA l 93.5 0.11 3.7E-06 57.6 7.3 45 336-385 258-303 (450)
101 2yx1_A Hypothetical protein MJ 93.3 0.061 2.1E-06 57.2 4.7 55 337-399 195-255 (336)
102 3d2l_A SAM-dependent methyltra 93.2 1.9 6.4E-05 42.1 15.3 41 338-386 34-74 (243)
103 1qam_A ERMC' methyltransferase 93.1 0.074 2.5E-06 53.9 4.8 55 337-398 30-87 (244)
104 2ih2_A Modification methylase 93.0 0.4 1.4E-05 51.6 10.9 38 338-381 40-79 (421)
105 2oyr_A UPF0341 protein YHIQ; a 93.0 0.046 1.6E-06 56.4 3.2 54 339-399 90-157 (258)
106 1o54_A SAM-dependent O-methylt 92.9 0.27 9.4E-06 50.1 8.9 44 337-386 112-157 (277)
107 1sqg_A SUN protein, FMU protei 92.8 0.087 3E-06 57.9 5.1 46 336-386 245-290 (429)
108 3m33_A Uncharacterized protein 92.6 0.14 4.6E-06 50.6 5.9 54 336-396 47-100 (226)
109 3njr_A Precorrin-6Y methylase; 92.4 0.12 4E-06 50.7 5.1 56 336-398 54-115 (204)
110 1x3p_A Cpsrp43; chromo-2 domai 92.3 0.046 1.6E-06 43.0 1.5 29 476-508 19-47 (54)
111 2qm3_A Predicted methyltransfe 92.3 0.84 2.9E-05 48.9 12.1 41 338-386 173-215 (373)
112 3pfg_A N-methyltransferase; N, 91.8 0.14 4.8E-06 51.5 5.0 55 337-398 50-104 (263)
113 3tqs_A Ribosomal RNA small sub 91.6 0.12 4E-06 53.1 4.2 55 337-398 29-86 (255)
114 2oo3_A Protein involved in cat 91.2 0.19 6.6E-06 52.4 5.2 56 338-400 92-150 (283)
115 2ar0_A M.ecoki, type I restric 91.2 1.5 5E-05 49.8 13.0 50 336-385 168-230 (541)
116 2vdv_E TRNA (guanine-N(7)-)-me 91.1 0.12 4.2E-06 51.8 3.6 57 337-398 49-118 (246)
117 2zig_A TTHA0409, putative modi 90.7 0.17 5.8E-06 52.7 4.4 43 337-386 235-277 (297)
118 2h1r_A Dimethyladenosine trans 90.7 0.17 5.8E-06 52.9 4.4 43 337-386 42-84 (299)
119 3m70_A Tellurite resistance pr 90.6 0.19 6.6E-06 51.2 4.6 54 337-397 120-177 (286)
120 2okc_A Type I restriction enzy 90.3 2.5 8.5E-05 46.4 13.5 47 336-385 170-227 (445)
121 3hnr_A Probable methyltransfer 90.3 0.22 7.5E-06 48.3 4.5 54 337-397 45-99 (220)
122 3k0b_A Predicted N6-adenine-sp 90.3 0.34 1.2E-05 52.8 6.4 48 337-385 201-282 (393)
123 3dxy_A TRNA (guanine-N(7)-)-me 89.8 0.49 1.7E-05 46.9 6.7 59 337-400 34-97 (218)
124 2i7c_A Spermidine synthase; tr 89.8 5.3 0.00018 41.0 14.8 46 337-388 78-124 (283)
125 1xdz_A Methyltransferase GIDB; 89.7 0.35 1.2E-05 48.2 5.5 58 337-399 70-132 (240)
126 1iy9_A Spermidine synthase; ro 89.6 0.43 1.5E-05 49.2 6.3 59 337-400 75-142 (275)
127 3ggd_A SAM-dependent methyltra 89.6 0.3 1E-05 48.3 4.9 57 336-399 55-113 (245)
128 3fut_A Dimethyladenosine trans 89.3 0.23 7.8E-06 51.5 3.9 52 340-398 49-102 (271)
129 3ofk_A Nodulation protein S; N 89.2 0.23 7.9E-06 48.1 3.7 54 336-396 50-106 (216)
130 2pxx_A Uncharacterized protein 89.1 0.38 1.3E-05 46.0 5.2 55 336-396 41-98 (215)
131 1ve3_A Hypothetical protein PH 89.1 0.34 1.2E-05 47.0 4.8 52 338-396 39-94 (227)
132 3tr6_A O-methyltransferase; ce 89.1 0.6 2.1E-05 45.5 6.6 60 337-400 64-129 (225)
133 3ftd_A Dimethyladenosine trans 89.0 0.25 8.4E-06 50.4 3.9 54 337-398 31-87 (249)
134 3tfw_A Putative O-methyltransf 88.9 0.49 1.7E-05 47.6 5.9 61 336-400 62-128 (248)
135 1g60_A Adenine-specific methyl 88.7 0.25 8.5E-06 50.5 3.6 45 336-387 211-255 (260)
136 3bxo_A N,N-dimethyltransferase 88.6 0.34 1.2E-05 47.4 4.5 55 337-398 40-94 (239)
137 3duw_A OMT, O-methyltransferas 88.5 0.73 2.5E-05 44.9 6.8 61 336-400 57-123 (223)
138 2gb4_A Thiopurine S-methyltran 88.4 0.43 1.5E-05 48.6 5.1 43 337-386 68-110 (252)
139 1vbf_A 231AA long hypothetical 88.3 0.42 1.5E-05 46.8 4.9 54 336-396 69-125 (231)
140 3gru_A Dimethyladenosine trans 88.3 0.2 7E-06 52.5 2.7 55 337-398 50-107 (295)
141 1zx0_A Guanidinoacetate N-meth 88.1 0.52 1.8E-05 46.6 5.5 58 336-399 59-120 (236)
142 3l8d_A Methyltransferase; stru 87.9 0.46 1.6E-05 46.7 4.9 53 337-396 53-107 (242)
143 2h00_A Methyltransferase 10 do 87.9 0.37 1.3E-05 48.2 4.3 45 337-386 65-109 (254)
144 3g89_A Ribosomal RNA small sub 87.8 0.58 2E-05 47.4 5.7 59 336-399 79-142 (249)
145 3grz_A L11 mtase, ribosomal pr 87.8 0.39 1.3E-05 46.2 4.2 54 337-396 60-118 (205)
146 4fzv_A Putative methyltransfer 87.8 1.2 3.9E-05 48.1 8.3 45 336-385 147-191 (359)
147 1o9g_A RRNA methyltransferase; 87.8 0.29 1E-05 49.0 3.4 48 337-387 51-98 (250)
148 3i9f_A Putative type 11 methyl 87.7 0.5 1.7E-05 43.8 4.8 53 336-395 16-68 (170)
149 1pjz_A Thiopurine S-methyltran 87.6 0.36 1.2E-05 47.0 3.9 42 337-385 22-63 (203)
150 2qfm_A Spermine synthase; sper 87.6 0.68 2.3E-05 50.0 6.3 58 337-400 188-258 (364)
151 3lbf_A Protein-L-isoaspartate 87.6 0.6 2.1E-05 45.0 5.4 54 336-396 76-134 (210)
152 1mjf_A Spermidine synthase; sp 87.4 0.77 2.6E-05 47.3 6.4 58 337-400 75-147 (281)
153 1wzn_A SAM-dependent methyltra 87.4 0.51 1.7E-05 46.8 4.9 55 337-398 41-99 (252)
154 2p7i_A Hypothetical protein; p 87.4 0.69 2.4E-05 45.2 5.8 55 337-398 42-97 (250)
155 3ou2_A SAM-dependent methyltra 87.4 0.42 1.4E-05 46.0 4.2 54 337-397 46-100 (218)
156 2p35_A Trans-aconitate 2-methy 87.2 0.57 1.9E-05 46.5 5.1 58 336-398 32-89 (259)
157 4htf_A S-adenosylmethionine-de 87.0 0.48 1.6E-05 48.2 4.5 55 337-398 68-128 (285)
158 3uzu_A Ribosomal RNA small sub 87.0 0.32 1.1E-05 50.5 3.2 55 337-398 42-101 (279)
159 1zq9_A Probable dimethyladenos 87.0 0.32 1.1E-05 50.3 3.2 53 337-396 28-86 (285)
160 3sm3_A SAM-dependent methyltra 86.9 0.52 1.8E-05 45.8 4.6 45 337-388 30-74 (235)
161 1yb2_A Hypothetical protein TA 86.8 0.5 1.7E-05 48.2 4.6 47 336-386 109-155 (275)
162 3u81_A Catechol O-methyltransf 86.8 0.58 2E-05 45.8 4.9 60 336-399 57-122 (221)
163 2xvm_A Tellurite resistance pr 86.8 0.57 1.9E-05 44.3 4.7 54 337-397 32-90 (199)
164 1dus_A MJ0882; hypothetical pr 86.8 0.6 2E-05 43.7 4.8 43 337-386 52-94 (194)
165 3iv6_A Putative Zn-dependent a 86.7 0.55 1.9E-05 48.3 4.8 47 336-389 44-90 (261)
166 2b2y_C CHD-1, chromodomain-hel 86.7 0.18 6.3E-06 45.6 1.0 43 451-498 34-81 (115)
167 3g5l_A Putative S-adenosylmeth 86.7 0.64 2.2E-05 46.2 5.2 57 336-398 43-101 (253)
168 2avd_A Catechol-O-methyltransf 86.6 0.82 2.8E-05 44.6 5.8 60 337-400 69-134 (229)
169 2yqz_A Hypothetical protein TT 86.3 0.68 2.3E-05 45.9 5.1 55 336-397 38-96 (263)
170 3mb5_A SAM-dependent methyltra 86.2 0.67 2.3E-05 46.2 5.0 58 336-397 92-155 (255)
171 3ntv_A MW1564 protein; rossman 86.1 0.66 2.3E-05 46.0 4.9 58 337-399 71-134 (232)
172 2epb_A Chromodomain-helicase-D 86.0 0.035 1.2E-06 45.8 -3.8 52 454-507 12-63 (68)
173 3bzb_A Uncharacterized protein 85.9 0.62 2.1E-05 47.8 4.7 44 337-386 79-123 (281)
174 2kw5_A SLR1183 protein; struct 85.6 0.56 1.9E-05 44.8 4.0 50 340-396 32-85 (202)
175 3dli_A Methyltransferase; PSI- 85.5 0.97 3.3E-05 44.6 5.8 53 337-399 41-93 (240)
176 4dcm_A Ribosomal RNA large sub 85.5 0.58 2E-05 50.5 4.4 42 338-386 223-266 (375)
177 3c3p_A Methyltransferase; NP_9 85.3 0.94 3.2E-05 43.8 5.5 59 337-399 56-120 (210)
178 3dr5_A Putative O-methyltransf 85.3 0.62 2.1E-05 46.3 4.2 58 338-399 57-121 (221)
179 2pt6_A Spermidine synthase; tr 85.2 1.1 3.9E-05 47.2 6.4 58 337-400 116-183 (321)
180 3bkw_A MLL3908 protein, S-aden 85.2 1.1 3.7E-05 43.9 5.9 54 337-397 43-99 (243)
181 3jwg_A HEN1, methyltransferase 85.1 0.87 3E-05 44.1 5.1 44 337-387 29-74 (219)
182 1g8a_A Fibrillarin-like PRE-rR 85.1 0.56 1.9E-05 45.9 3.8 55 337-397 73-132 (227)
183 3ujc_A Phosphoethanolamine N-m 85.1 0.8 2.7E-05 45.4 5.0 56 336-397 54-112 (266)
184 1jsx_A Glucose-inhibited divis 84.9 0.59 2E-05 44.9 3.7 54 338-396 66-124 (207)
185 3jwh_A HEN1; methyltransferase 84.6 0.98 3.4E-05 43.7 5.2 44 337-387 29-74 (217)
186 3dou_A Ribosomal RNA large sub 84.4 0.42 1.5E-05 46.3 2.5 50 336-398 24-73 (191)
187 1fbn_A MJ fibrillarin homologu 84.3 1 3.4E-05 44.5 5.2 54 337-396 74-131 (230)
188 2gs9_A Hypothetical protein TT 84.3 0.92 3.2E-05 43.6 4.8 51 337-397 36-87 (211)
189 3g5t_A Trans-aconitate 3-methy 84.3 0.79 2.7E-05 47.0 4.6 59 336-398 35-100 (299)
190 3ccf_A Cyclopropane-fatty-acyl 84.2 1 3.5E-05 45.6 5.4 56 336-398 56-111 (279)
191 3hm2_A Precorrin-6Y C5,15-meth 84.2 0.79 2.7E-05 42.6 4.2 45 336-386 24-69 (178)
192 2pwy_A TRNA (adenine-N(1)-)-me 83.8 1 3.4E-05 44.7 5.1 55 336-396 95-157 (258)
193 2nxc_A L11 mtase, ribosomal pr 83.7 0.61 2.1E-05 47.2 3.4 44 336-386 119-162 (254)
194 3bwc_A Spermidine synthase; SA 83.6 1.5 5.1E-05 45.7 6.4 59 337-400 95-162 (304)
195 3g2m_A PCZA361.24; SAM-depende 83.5 0.51 1.8E-05 48.4 2.8 52 339-397 84-143 (299)
196 1xxl_A YCGJ protein; structura 83.5 0.97 3.3E-05 44.7 4.7 55 336-397 20-79 (239)
197 3ldu_A Putative methylase; str 83.3 0.6 2E-05 50.7 3.3 50 336-386 194-277 (385)
198 1yub_A Ermam, rRNA methyltrans 83.3 0.091 3.1E-06 52.9 -3.0 54 337-397 29-85 (245)
199 3thr_A Glycine N-methyltransfe 83.0 1.1 3.8E-05 45.4 5.1 42 337-385 57-98 (293)
200 3vc1_A Geranyl diphosphate 2-C 83.0 0.88 3E-05 47.1 4.4 55 336-396 116-176 (312)
201 3kkz_A Uncharacterized protein 82.8 0.89 3E-05 45.7 4.2 56 336-397 45-106 (267)
202 2yvl_A TRMI protein, hypotheti 82.8 1 3.5E-05 44.4 4.6 43 337-386 91-133 (248)
203 2o07_A Spermidine synthase; st 82.6 1.7 5.8E-05 45.5 6.4 58 337-400 95-162 (304)
204 2ipx_A RRNA 2'-O-methyltransfe 82.5 1.1 3.8E-05 44.1 4.7 54 337-397 77-136 (233)
205 2gpy_A O-methyltransferase; st 82.4 1.3 4.4E-05 43.6 5.1 58 337-399 54-117 (233)
206 3mq2_A 16S rRNA methyltransfer 81.9 0.57 1.9E-05 45.5 2.3 56 336-397 26-91 (218)
207 3hem_A Cyclopropane-fatty-acyl 81.6 0.71 2.4E-05 47.5 3.0 57 336-398 71-133 (302)
208 1i9g_A Hypothetical protein RV 81.5 1.6 5.3E-05 44.1 5.5 55 336-396 98-162 (280)
209 2ex4_A Adrenal gland protein A 81.3 1.2 4.1E-05 43.9 4.5 45 337-388 79-124 (241)
210 1ri5_A MRNA capping enzyme; me 81.3 0.99 3.4E-05 45.7 3.9 46 336-388 63-109 (298)
211 1sui_A Caffeoyl-COA O-methyltr 81.2 1.4 4.6E-05 44.5 4.9 60 337-400 79-144 (247)
212 2avn_A Ubiquinone/menaquinone 81.1 1.5 5.2E-05 43.8 5.2 52 337-396 54-105 (260)
213 3dh0_A SAM dependent methyltra 80.7 0.99 3.4E-05 43.5 3.5 54 336-396 36-97 (219)
214 3dlc_A Putative S-adenosyl-L-m 80.6 1 3.5E-05 43.0 3.6 51 340-396 46-102 (219)
215 1xtp_A LMAJ004091AAA; SGPP, st 80.6 1.2 4E-05 44.0 4.1 56 336-397 92-150 (254)
216 3gjy_A Spermidine synthase; AP 80.5 2.2 7.6E-05 45.1 6.4 59 337-400 89-152 (317)
217 1xj5_A Spermidine synthase 1; 80.4 2.3 7.9E-05 45.1 6.5 58 337-400 120-187 (334)
218 4gek_A TRNA (CMO5U34)-methyltr 80.3 1.4 4.8E-05 44.9 4.7 60 336-398 69-134 (261)
219 2pbf_A Protein-L-isoaspartate 80.3 1.9 6.4E-05 42.0 5.4 44 336-385 79-128 (227)
220 1uir_A Polyamine aminopropyltr 80.3 2.3 7.9E-05 44.5 6.4 58 337-400 77-145 (314)
221 3uwp_A Histone-lysine N-methyl 80.0 1.6 5.3E-05 48.2 5.1 59 336-399 172-244 (438)
222 4azs_A Methyltransferase WBDD; 79.8 1.6 5.4E-05 49.7 5.3 58 336-400 65-127 (569)
223 3adn_A Spermidine synthase; am 79.7 0.98 3.4E-05 47.1 3.3 58 337-399 83-150 (294)
224 1p91_A Ribosomal RNA large sub 79.1 2 6.8E-05 43.0 5.3 56 336-397 84-140 (269)
225 3f4k_A Putative methyltransfer 79.0 0.82 2.8E-05 45.3 2.4 54 337-396 46-105 (257)
226 3mgg_A Methyltransferase; NYSG 78.8 1.9 6.5E-05 43.3 5.1 58 336-398 36-98 (276)
227 3cbg_A O-methyltransferase; cy 78.8 2.5 8.4E-05 41.8 5.8 59 337-399 72-136 (232)
228 3ldg_A Putative uncharacterize 78.5 1.1 3.8E-05 48.6 3.3 48 337-385 194-275 (384)
229 3c3y_A Pfomt, O-methyltransfer 78.5 2.3 7.9E-05 42.3 5.5 60 337-400 70-135 (237)
230 3r0q_C Probable protein argini 78.3 1.2 4.1E-05 47.9 3.5 57 336-399 62-124 (376)
231 3r3h_A O-methyltransferase, SA 78.1 0.6 2E-05 47.0 1.0 60 337-400 60-125 (242)
232 2fyt_A Protein arginine N-meth 78.1 1.3 4.5E-05 46.9 3.7 55 337-398 64-124 (340)
233 1nkv_A Hypothetical protein YJ 78.0 2 6.7E-05 42.5 4.8 56 336-397 35-96 (256)
234 2hnk_A SAM-dependent O-methylt 77.9 2.1 7E-05 42.4 4.9 57 337-399 60-124 (239)
235 1dl5_A Protein-L-isoaspartate 77.8 1.7 5.9E-05 45.2 4.5 56 336-398 74-137 (317)
236 1qyr_A KSGA, high level kasuga 77.3 1.8 6E-05 44.2 4.3 53 337-398 21-78 (252)
237 1vl5_A Unknown conserved prote 77.3 2.1 7.2E-05 42.6 4.8 55 336-397 36-95 (260)
238 1i1n_A Protein-L-isoaspartate 77.2 2.7 9.1E-05 40.9 5.5 45 336-386 76-122 (226)
239 2fk8_A Methoxy mycolic acid sy 77.1 1.8 6.2E-05 44.6 4.4 57 336-398 89-151 (318)
240 2b2c_A Spermidine synthase; be 76.4 3.7 0.00013 43.1 6.6 57 338-400 109-175 (314)
241 3kr9_A SAM-dependent methyltra 76.4 2.4 8.2E-05 42.6 4.9 43 338-385 16-58 (225)
242 3ckk_A TRNA (guanine-N(7)-)-me 76.2 2.3 7.8E-05 42.5 4.7 58 336-398 45-113 (235)
243 3cc8_A Putative methyltransfer 76.2 2.8 9.6E-05 40.2 5.2 52 336-396 31-82 (230)
244 1kpg_A CFA synthase;, cyclopro 75.8 2.5 8.5E-05 42.7 4.9 57 336-398 63-125 (287)
245 3ocj_A Putative exported prote 75.7 2 7E-05 44.1 4.3 59 336-398 117-181 (305)
246 2p8j_A S-adenosylmethionine-de 75.6 2.3 7.9E-05 40.5 4.4 54 337-396 23-80 (209)
247 1wg8_A Predicted S-adenosylmet 75.4 4.9 0.00017 41.9 7.0 61 337-405 22-84 (285)
248 3q7e_A Protein arginine N-meth 75.2 2 6.9E-05 45.5 4.2 56 336-398 65-126 (349)
249 3gnl_A Uncharacterized protein 74.6 2.8 9.6E-05 42.7 4.9 43 338-385 22-64 (244)
250 2b25_A Hypothetical protein; s 74.3 1.9 6.4E-05 45.2 3.7 45 336-386 104-150 (336)
251 3lec_A NADB-rossmann superfami 74.3 2.9 9.9E-05 42.2 4.9 44 337-385 21-64 (230)
252 1jg1_A PIMT;, protein-L-isoasp 73.9 2.5 8.5E-05 41.6 4.2 45 336-386 90-134 (235)
253 3fzg_A 16S rRNA methylase; met 73.2 2.9 0.0001 41.3 4.5 46 336-386 48-93 (200)
254 1u2z_A Histone-lysine N-methyl 73.2 3.5 0.00012 45.5 5.5 42 336-382 241-282 (433)
255 2o57_A Putative sarcosine dime 73.1 2.7 9.1E-05 42.7 4.4 55 336-396 81-141 (297)
256 3gu3_A Methyltransferase; alph 72.9 2.2 7.6E-05 43.3 3.7 58 336-397 21-82 (284)
257 3ege_A Putative methyltransfer 72.8 1.7 5.8E-05 43.6 2.7 54 336-397 33-86 (261)
258 1r18_A Protein-L-isoaspartate( 72.3 2.6 8.7E-05 41.2 3.9 44 336-385 83-133 (227)
259 3lkd_A Type I restriction-modi 71.9 3 0.0001 47.4 4.7 48 336-385 220-267 (542)
260 2yxe_A Protein-L-isoaspartate 71.4 3.2 0.00011 39.9 4.3 45 336-386 76-122 (215)
261 3bgv_A MRNA CAP guanine-N7 met 71.3 2.3 7.9E-05 43.8 3.4 44 337-386 34-77 (313)
262 2y1w_A Histone-arginine methyl 70.3 3.8 0.00013 43.4 4.9 55 337-398 50-110 (348)
263 1g6q_1 HnRNP arginine N-methyl 70.1 2.7 9.3E-05 44.1 3.7 55 337-398 38-98 (328)
264 3id6_C Fibrillarin-like rRNA/T 69.9 5.6 0.00019 40.0 5.8 57 336-396 75-134 (232)
265 2i62_A Nicotinamide N-methyltr 69.0 3 0.0001 41.2 3.6 46 336-388 55-101 (265)
266 1boo_A Protein (N-4 cytosine-s 68.1 4 0.00014 42.9 4.4 47 336-389 251-297 (323)
267 3opn_A Putative hemolysin; str 67.9 1.8 6E-05 43.4 1.6 50 336-391 36-85 (232)
268 4hg2_A Methyltransferase type 67.8 1.9 6.6E-05 43.9 1.9 52 339-398 41-92 (257)
269 3g07_A 7SK snRNA methylphospha 67.8 3.9 0.00013 41.9 4.2 46 337-388 46-92 (292)
270 4fsd_A Arsenic methyltransfera 66.9 4.2 0.00014 43.5 4.4 59 336-398 82-153 (383)
271 2pjd_A Ribosomal RNA small sub 66.6 3.5 0.00012 43.4 3.7 42 338-386 197-240 (343)
272 2plw_A Ribosomal RNA methyltra 66.4 2.2 7.6E-05 40.5 1.9 49 337-397 22-73 (201)
273 3bus_A REBM, methyltransferase 65.8 6.4 0.00022 39.2 5.3 45 336-386 60-104 (273)
274 3b3j_A Histone-arginine methyl 65.4 4.5 0.00015 45.1 4.4 55 337-398 158-218 (480)
275 4hc4_A Protein arginine N-meth 65.0 5.3 0.00018 43.2 4.7 56 337-398 83-143 (376)
276 3htx_A HEN1; HEN1, small RNA m 63.0 5.3 0.00018 47.7 4.5 55 337-398 721-789 (950)
277 2vdw_A Vaccinia virus capping 62.4 6.6 0.00022 40.8 4.7 42 338-386 49-91 (302)
278 3fwz_A Inner membrane protein 61.1 7.8 0.00027 35.0 4.5 50 344-398 11-60 (140)
279 1nt2_A Fibrillarin-like PRE-rR 61.0 6.9 0.00024 38.2 4.4 40 337-382 57-97 (210)
280 3fpf_A Mtnas, putative unchara 60.7 8.2 0.00028 40.4 5.1 58 336-398 121-183 (298)
281 2bm8_A Cephalosporin hydroxyla 58.7 2.1 7.3E-05 42.7 0.2 56 338-396 82-139 (236)
282 2nyu_A Putative ribosomal RNA 58.6 4.7 0.00016 37.9 2.6 35 337-377 22-66 (196)
283 3p2e_A 16S rRNA methylase; met 58.5 4.3 0.00015 40.2 2.4 58 336-398 23-89 (225)
284 3khk_A Type I restriction-modi 58.0 4.6 0.00016 45.8 2.8 45 340-385 247-302 (544)
285 4df3_A Fibrillarin-like rRNA/T 57.6 9.7 0.00033 38.4 4.8 48 336-387 76-123 (233)
286 1ej0_A FTSJ; methyltransferase 57.4 2.5 8.5E-05 38.4 0.4 54 336-399 21-74 (180)
287 3s1s_A Restriction endonucleas 56.6 5.7 0.00019 47.3 3.3 46 337-385 321-369 (878)
288 1i4w_A Mitochondrial replicati 55.7 12 0.00041 40.1 5.5 57 337-398 58-116 (353)
289 3v97_A Ribosomal RNA large sub 55.6 6.6 0.00023 45.9 3.6 50 337-386 190-276 (703)
290 1eg2_A Modification methylase 55.2 7 0.00024 41.1 3.5 45 336-387 241-288 (319)
291 1vlm_A SAM-dependent methyltra 55.1 9.6 0.00033 36.7 4.2 46 338-396 48-93 (219)
292 2cmg_A Spermidine synthase; tr 55.0 6.5 0.00022 40.1 3.1 44 338-388 73-116 (262)
293 3llv_A Exopolyphosphatase-rela 53.1 12 0.00042 33.4 4.3 50 344-398 10-59 (141)
294 3lcv_B Sisomicin-gentamicin re 49.4 9.9 0.00034 39.5 3.3 44 338-386 133-176 (281)
295 3orh_A Guanidinoacetate N-meth 48.7 19 0.00064 35.5 5.3 57 337-399 60-120 (236)
296 2a14_A Indolethylamine N-methy 47.2 13 0.00044 37.2 3.8 44 336-385 54-97 (263)
297 2b2y_A CHD-1, chromodomain-hel 46.4 4.9 0.00017 39.3 0.5 47 451-497 34-80 (187)
298 2h1e_A Chromo domain protein 1 43.7 4.7 0.00016 39.1 -0.1 36 472-507 138-174 (177)
299 2oxt_A Nucleoside-2'-O-methylt 41.0 9.7 0.00033 38.8 1.8 33 336-376 73-105 (265)
300 3hp7_A Hemolysin, putative; st 40.8 9.9 0.00034 39.6 1.8 48 337-390 85-132 (291)
301 3c85_A Putative glutathione-re 40.1 21 0.0007 33.4 3.8 48 344-396 43-91 (183)
302 3tka_A Ribosomal RNA small sub 39.2 45 0.0015 35.6 6.5 64 336-405 56-122 (347)
303 2wa2_A Non-structural protein 39.1 11 0.00037 38.8 1.8 33 336-376 81-113 (276)
304 3bkx_A SAM-dependent methyltra 39.0 10 0.00034 37.7 1.5 36 336-377 42-79 (275)
305 2b2y_A CHD-1, chromodomain-hel 38.2 4.8 0.00016 39.4 -1.0 36 473-508 147-183 (187)
306 2m0o_A PHD finger protein 1; t 37.9 28 0.00097 29.0 3.7 28 188-216 26-53 (79)
307 1lss_A TRK system potassium up 37.8 39 0.0013 29.4 5.1 49 344-396 8-56 (140)
308 2ee1_A Chromodomain helicase-D 37.2 11 0.00039 30.4 1.2 22 474-495 27-48 (64)
309 2dpm_A M.dpnii 1, protein (ade 37.0 35 0.0012 35.2 5.2 38 339-385 37-74 (284)
310 2r3s_A Uncharacterized protein 36.2 23 0.0008 36.2 3.8 45 336-386 164-208 (335)
311 4e2x_A TCAB9; kijanose, tetron 35.3 28 0.00097 37.1 4.4 43 336-385 106-148 (416)
312 3ufb_A Type I restriction-modi 35.1 29 0.001 39.0 4.6 49 337-385 217-273 (530)
313 3l4b_C TRKA K+ channel protien 35.0 32 0.0011 33.2 4.4 52 344-399 4-55 (218)
314 1qzz_A RDMB, aclacinomycin-10- 34.0 34 0.0012 35.7 4.7 45 336-386 181-225 (374)
315 3ua3_A Protein arginine N-meth 34.0 40 0.0014 39.5 5.5 61 337-399 409-484 (745)
316 4hcz_A PHD finger protein 1; p 32.8 52 0.0018 26.0 4.3 28 188-216 3-30 (58)
317 1x87_A Urocanase protein; stru 32.2 70 0.0024 35.7 6.7 63 342-408 164-226 (551)
318 1uwk_A Urocanate hydratase; hy 32.2 67 0.0023 35.9 6.6 63 342-408 169-231 (557)
319 2fkn_A Urocanate hydratase; ro 31.4 68 0.0023 35.8 6.4 63 342-408 165-227 (552)
320 2k4m_A TR8_protein, UPF0146 pr 31.4 16 0.00055 34.6 1.4 37 337-380 35-73 (153)
321 2eqj_A Metal-response element- 31.3 50 0.0017 26.9 4.0 34 188-223 13-46 (66)
322 2g72_A Phenylethanolamine N-me 31.0 38 0.0013 34.0 4.4 45 337-387 71-115 (289)
323 3oj0_A Glutr, glutamyl-tRNA re 31.0 66 0.0022 28.7 5.5 41 344-387 25-65 (144)
324 1af7_A Chemotaxis receptor met 30.6 36 0.0012 34.9 4.0 47 337-386 105-157 (274)
325 3ged_A Short-chain dehydrogena 30.5 74 0.0025 32.0 6.3 51 346-399 9-59 (247)
326 3ic5_A Putative saccharopine d 28.6 74 0.0025 26.6 5.2 48 346-398 11-59 (118)
327 3frh_A 16S rRNA methylase; met 28.4 46 0.0016 34.0 4.3 43 336-386 104-146 (253)
328 2h1e_A Chromo domain protein 1 27.3 14 0.00046 35.8 0.1 38 472-509 44-83 (177)
329 1id1_A Putative potassium chan 27.0 54 0.0018 29.6 4.2 51 345-398 8-60 (153)
330 3zzs_A Transcription attenuati 26.5 1.1E+02 0.0038 24.4 5.1 47 223-270 13-59 (65)
331 1x19_A CRTF-related protein; m 26.2 41 0.0014 35.1 3.6 44 336-385 189-232 (359)
332 2xk0_A Polycomb protein PCL; t 25.8 75 0.0026 26.0 4.2 24 188-212 15-38 (69)
333 2p41_A Type II methyltransfera 25.1 31 0.0011 35.8 2.4 31 336-374 81-111 (305)
334 2a7y_A Hypothetical protein RV 24.3 61 0.0021 27.5 3.5 39 189-228 6-45 (83)
335 4g65_A TRK system potassium up 23.8 72 0.0025 35.1 5.2 56 345-405 8-63 (461)
336 2qe6_A Uncharacterized protein 23.2 56 0.0019 33.0 3.9 57 338-399 78-140 (274)
337 1yf3_A DNA adenine methylase; 23.0 44 0.0015 33.8 3.0 38 339-386 26-63 (259)
338 2g1p_A DNA adenine methylase; 22.9 56 0.0019 33.5 3.8 38 339-385 29-66 (278)
339 3sso_A Methyltransferase; macr 21.9 51 0.0018 36.1 3.4 56 336-399 215-276 (419)
340 1tw3_A COMT, carminomycin 4-O- 21.3 50 0.0017 34.3 3.1 44 337-386 183-226 (360)
341 3dii_A Short-chain dehydrogena 21.2 1.4E+02 0.0048 29.0 6.3 53 344-399 7-59 (247)
342 3l9w_A Glutathione-regulated p 20.7 65 0.0022 34.9 4.0 50 344-398 8-57 (413)
No 1
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=100.00 E-value=1.4e-97 Score=884.22 Aligned_cols=565 Identities=55% Similarity=0.957 Sum_probs=451.3
Q ss_pred CCCccccccCCCCCCchhhccCcchhhhhhhhhcCCCCChHHHHhhhcceeeEEEECCEEEEecCCeEEEecCCCCCCeE
Q 047980 128 DDEPEARFLGDPVPDGEARQRWPKRYEVKKQKRRNQKDDDEEEIIQAKCHYMWAEVDGHITYDLFDDAHVKAESGEEDYI 207 (718)
Q Consensus 128 ~~~~~~~f~g~pv~~~ear~~wp~ry~~~~~~~~~~~~~~~~~~~~~r~~Y~s~~v~G~~~y~vGD~VyV~~~~~~p~yI 207 (718)
..+.+++|+|+|||++|||++|||||+.+.. ....+++++.++||||.++.|+|+ +|+|||||||++++++++||
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~v~~~~~~~~~i 76 (784)
T 4ft4_B 2 AGDHEPEFIGSPVAADEARSNWPKRYGRSTA----AKKPDEEEELKARCHYRSAKVDNV-VYCLGDDVYVKAGENEADYI 76 (784)
T ss_dssp ---CCCEECSSCCCHHHHHHHCGGGCC----------------CCCEEEECSEEEETTE-EEETTCEEEECCSTTSCCEE
T ss_pred CCCCCccccCCcCChHHHhhcCccccccccc----CCCccchhccccceeeeeeeECCE-EEeCCCeEEEeCCCCCCCEE
Confidence 3567899999999999999999999977543 334456677899999999999999 99999999999999999999
Q ss_pred EEEeEEeecCCCceEEEEEEEEecccCcccc------ccccCCCCceEeeCCccccccccccceeEEEeeCCccchhhhh
Q 047980 208 CKIVEMFEAVDGTPYFTAQWYYRARDTVIES------NAHLIDQRRVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKK 281 (718)
Q Consensus 208 grI~~iwe~~~g~~~v~v~WFyRpeET~~~~------~~~~~d~rELF~S~~~d~~~l~~I~gKC~V~~~~~~~~~~~~~ 281 (718)
|||++||++.+|+.+|+|||||||+||+++. ..+.+|+||||+|+++++|+++||.|||+|+++.+..+.....
T Consensus 77 ~~i~~~~~~~~~~~~~~~~~~~r~~d~~~~~~~~~~~~~~~~d~~~~~~s~~~~~~~~~~i~~k~~v~~~~~~~~~~~~~ 156 (784)
T 4ft4_B 77 GRITEFFEGTDQCHYFTCRWFFRAEDTVINSLVSISVDGHKHDPRRVFLSEEKNDNVLDCIISKVKIVHVDPNMDPKAKA 156 (784)
T ss_dssp EEEEEEEEETTSCEEEEEEEEEEGGGSTTGGGGGCCBTTBCCCTTBEEEEEEEEEEEGGGEEEECCEEECCTTSCHHHHH
T ss_pred EEEEEEEEcCCCCEEEEEEEeeChhhhcccccccccccccccccceEEEeCcEEEechHHeeeeEEEEeeCccccchhhh
Confidence 9999999999999999999999999999764 3567899999999999999999999999999999888887777
Q ss_pred ccCCCCcEEEeeeeeCCCCeeeCCCccCccccCCCccccccCCCCCccccCCCCccccceeccccccchhhHhHhhhhhh
Q 047980 282 LAIPHCDYYCDMMYLLPYSTFFSLPPENKRVSSETSSTISSDVDANECEVGEPQKMDVKLLDLYSGCGAMSTGLCLGANL 361 (718)
Q Consensus 282 ~~~~~~dfyc~~~Yd~~~~~F~~lp~e~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~lDLFsG~Gg~s~Gl~~g~~~ 361 (718)
.....|+|||++.|...+.+|.+++.++....++.+.+...+..+..| ....++++|++|||||||||||+||+++...
T Consensus 157 ~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~k~ltvIDLFAG~GGls~Gfe~AG~~ 235 (784)
T 4ft4_B 157 QLIESCDLYYDMSYSVAYSTFANISSENGQSGSDTASGISSDDVDLET-SSSMPTRTATLLDLYSGCGGMSTGLCLGAAL 235 (784)
T ss_dssp HHHHHCSEEESEEEETGGGEEEEC------------------------------CEEEEEEEETCTTSHHHHHHHHHHHH
T ss_pred hccCCcceEeccccCccccCccCCCccccccccccccccccccccccc-ccccCCCCCeEEEeCcCccHHHHHHHHhCcc
Confidence 777889999999999999999999999876655544444443221112 2445688999999999999999999554333
Q ss_pred cCCeeEeEEeecccHHHHHHHHhhCCCceeecCchHHHHHHHHHHHHhhhcccccccCCccccccccCCCCCCCcCCCCC
Q 047980 362 AGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWEKLCISFSLIARKDPQQQLYSFNDDGESEEDDDNG 441 (718)
Q Consensus 362 aG~~~~~~~avd~~~~A~~t~~~N~p~~~v~~~~~~~~l~~lke~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (718)
+|..+.++||||+|+.||+||++|||++.++++|+++|+..+.+|..+|..+..-..... ......
T Consensus 236 ~~~~f~vv~AvE~d~~A~~Ty~~Nhp~~~~~~~di~~i~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~------- 301 (784)
T 4ft4_B 236 SGLKLETRWAVDFNSFACQSLKYNHPQTEVRNEKADEFLALLKEWAVLCKKYVQDVDSNL-------ASSEDQ------- 301 (784)
T ss_dssp HTEEEEEEEEEESCHHHHHHHHHHCTTSEEEESCHHHHHHHHHHHHHHHHHTC---------------------------
T ss_pred cCCceeEEEEEeCCHHHHHHHHHHCCCCceecCcHHHhhhhhhhcccccccccccccccc-------cccccc-------
Confidence 343344459999999999999999999999999999999999999998877542110000 000000
Q ss_pred CCCCCCCCchhHHHHHHHHhHhcCCchhhhcccceeeEeeccCCCCCCCCcccccccccccchhhhhhcccccccCCCCC
Q 047980 442 NVEDESEDDSEIFEVEKILKICYGDPKEIKKRGLYLKVRWRNYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKSKILPLPG 521 (718)
Q Consensus 442 ~~~~~~~~~~~~~~v~~l~~i~~g~p~~~~~~~l~~~~~w~~~~~~~d~w~~~~~~~~~~~~i~e~~~~~~~~~l~p~~~ 521 (718)
..........++..+++.+++++.+.. ..++++++.|.++....++|.++..+.+|.+.|.+++...+...++|.+|
T Consensus 302 -~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~i~~~~~~~~~~~~~~~~G 378 (784)
T 4ft4_B 302 -ADEDSPLDKDEFVVEKLVGICYGGSDR--ENGIYFKVQWEGYGPEEDTWEPIDNLSDCPQKIREFVQEGHKRKILPLPG 378 (784)
T ss_dssp -----------CCCEEEEEEEEESCSSS--CSSEEEEEEETTCCTTSCEEEESGGGTTCHHHHHHHHHHHHHHTSSCCTT
T ss_pred -cccccccccccchhhhhcccccccccc--cccccchhhhcccccccccccccccccccchhccccccccchhhccCCCC
Confidence 000111122234455677788887764 67789999999999999999999999999999999999999999999999
Q ss_pred CccEEEecCCCCccccccccCCCCCCcccchhhHHHHHHHHhhhcCCcEEEEecchhhhhcccchHHHHHHHHHHhCCce
Q 047980 522 DVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQ 601 (718)
Q Consensus 522 ~vDll~gGPPCQ~fS~ag~~r~~~~~~~D~rn~L~~~~~riv~~~kPk~~v~ENV~gll~~~~g~~~~~i~~~L~~lGY~ 601 (718)
+||||+||||||+||.+|++++...+.+|+||.||++|+|+|+.++|++||||||+||+++.+|.+++.|++.|.++||+
T Consensus 379 ~VDvl~GGpPCQ~FS~aG~~kg~~~~~~D~R~~L~~~~~riv~~~rPk~fvlENV~glls~~~g~~~~~il~~l~~lGY~ 458 (784)
T 4ft4_B 379 DVDVICGGPPCQGISGFNRYRNRDEPLKDEKNKQMVTFMDIVAYLKPKYVLMENVVDILKFADGYLGKYALSCLVAMKYQ 458 (784)
T ss_dssp SCSEEEECCCCCSSSGGGGGSCTTSTTTSTTCHHHHHHHHHHHHHCCSEEEEEEEGGGGTGGGGHHHHHHHHHHHHTTCE
T ss_pred CeEEEEecCCCcchhhhhcccCcCccccCchhHHHHHHHHHHHHHCCCEEEEEecCCccccccchHHHHHHHHHHhCCCe
Confidence 99999999999999999998877777899999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEeccccCCCCCCcEEEEEEecCCCCCCCCCCCccccccccCCCcccccccccccccchhhccCCccHHHHhcCCC
Q 047980 602 VRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERNTVAYDEGQQAELARKLLLQDAISDLP 681 (718)
Q Consensus 602 v~~~vLnA~dyGvPQ~R~R~fivg~r~~~~~p~~P~PtH~~~~~~~~p~~~~~~~v~~~~~~~~~l~~~vTv~dAI~DLP 681 (718)
+.+.+|||++|||||+|+|+||||++++..+|.||.|||........+..+..............+.+++|++|||+|||
T Consensus 459 v~~~vLnA~dyGVPQ~R~Rvfivg~r~d~~~~~~P~pth~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~dai~dlp 538 (784)
T 4ft4_B 459 ARLGMMVAGCYGLPQFRMRVFLWGALSSMVLPKYPLPTYDVVVRGGAPNAFSQCMVAYDETQKPSLKKALLLGDAISDLP 538 (784)
T ss_dssp EEEEEEEGGGGTCSSCCEEEEEEEECTTSCCCCEECCSBCCCCCSCSCGGGTTCBCSCCTTCCCCCBCCCCHHHHHTTSC
T ss_pred eeeeecCHHHcCCCcccccceeeeeccCCCcccCCCcccccccccccccccccccccccccccccccccccHHHHhhccc
Confidence 99999999999999999999999999999999999999987766655555555544444444556778999999999999
Q ss_pred CCCCCCCCCCccCCCCCCchHHHHHhcCCCccCc
Q 047980 682 SVDNYESRDEIPYDREPETEFQCFIRLRKDGKKL 715 (718)
Q Consensus 682 ~~~~~e~~~~~~Y~~~p~t~yq~~mR~~~~~~~~ 715 (718)
.+.++.....+.|...+.+.||++||.....+..
T Consensus 539 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 572 (784)
T 4ft4_B 539 KVQNHQPNDVMEYGGSPKTEFQRYIRLSRKDMLD 572 (784)
T ss_dssp CCCSCCCCSEECCSSCCCSHHHHHHTCCTTTTTC
T ss_pred ccccCCCccccccCCCCccHHHHHHhhccccccc
Confidence 9999998899999999999999999987665543
No 2
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=100.00 E-value=2e-75 Score=699.06 Aligned_cols=496 Identities=26% Similarity=0.452 Sum_probs=366.2
Q ss_pred CCCcccccccCCCCCCCccccccCCCCCCCCCCCCccccccCCCCCCchh-hccCcchhhhhhhhhcCCCCChHHHHhhh
Q 047980 96 SSSGVKVNKNRSSSKKPIDSVKKLPVRGEHDDDDEPEARFLGDPVPDGEA-RQRWPKRYEVKKQKRRNQKDDDEEEIIQA 174 (718)
Q Consensus 96 ~~~~~k~~~k~~~~~k~~~a~~~~~~~~~~~~~~~~~~~f~g~pv~~~ea-r~~wp~ry~~~~~~~~~~~~~~~~~~~~~ 174 (718)
.+..-+..+|+|++++++|+|..++|++.+..+.+.+.... +.++.++. ++.-..+. .+..+....|.++.-.....
T Consensus 68 ~c~~c~~~~k~gg~~~~~q~c~~r~c~~~~~~e~~d~~~~e-ee~~~~~~~~~~~~~~~-k~~~~~~~~W~G~p~k~~~~ 145 (1002)
T 3swr_A 68 KCKACKDMVKFGGSGRSKQACQERRCPNMAMKEADDDEEVD-DNIPEMPSPKKMHQGKK-KKQNKNRISWVGEAVKTDGK 145 (1002)
T ss_dssp CSTTGGGSSTTSSCTTCCCCCGGGCCTTCBCCCSCCCTTCT-TSSCCCCCCCCTTCSCB-CCCCCSCEEEESCCCCCBTT
T ss_pred CCcccccCCccCCCccccHHHHhccCcccccCccccccccc-ccccccccchhhhhccc-cccccccccccCcccccccC
Confidence 34444889999999999999999999987766655443321 22211111 11111110 11111111222222122357
Q ss_pred cceeeEEEECCEEEEecCCeEEEecCC-CCCCeEEEEeEEeecCCCceEEEEEEEEecccCccccccccCCCCceEeeCC
Q 047980 175 KCHYMWAEVDGHITYDLFDDAHVKAES-GEEDYICKIVEMFEAVDGTPYFTAQWYYRARDTVIESNAHLIDQRRVFFSEI 253 (718)
Q Consensus 175 r~~Y~s~~v~G~~~y~vGD~VyV~~~~-~~p~yIgrI~~iwe~~~g~~~v~v~WFyRpeET~~~~~~~~~d~rELF~S~~ 253 (718)
+.+|+++.++|. +|+|||||||++++ +.|+|||+|++||++.+|++||||+|||||+||+++.. ++++|||+|++
T Consensus 146 ~~~Y~s~~v~g~-~i~VGD~V~v~~~d~~~ppyIarIe~m~ed~~g~k~~~v~Wf~rp~ET~lg~~---~~~~ElFlsd~ 221 (1002)
T 3swr_A 146 KSYYKKVCIDAE-TLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGTDTVLGAT---SDPLELFLVDE 221 (1002)
T ss_dssp EEECSEEEETTE-EEETTCEEEECBSSTTSCCEEEEEEEEEEETTTEEEEEEEEEEEGGGSTTGGG---SCTTEEEEEEE
T ss_pred ceeeeEEEECCE-EEecCCEEEEecCCCCCCceEEEEEEEeecCCCCeEEEEEEEecchhcccccC---CCCCceEeecc
Confidence 899999999999 99999999999987 56779999999999999999999999999999997654 78999999999
Q ss_pred ccccccccccceeEEEeeCCccch--------hhhhccCCCCcEEEeeeeeCCCCeeeCCCccCccc-------------
Q 047980 254 QNDNPLECLVKKLNIARVPLNIDL--------EAKKLAIPHCDYYCDMMYLLPYSTFFSLPPENKRV------------- 312 (718)
Q Consensus 254 ~d~~~l~~I~gKC~V~~~~~~~~~--------~~~~~~~~~~dfyc~~~Yd~~~~~F~~lp~e~~~~------------- 312 (718)
||+++|++|.|||+|+++.+..+. .........++|||++.|++.+++|.+||.+....
T Consensus 222 cd~~~l~~I~gkc~V~~~~~~~~w~~~~~~~~~~~~~~~~~~~ffc~~~Y~~~~~~F~~lp~~~~~~~~~~~~c~~c~~~ 301 (1002)
T 3swr_A 222 CEDMQLSYIHSKVKVIYKAPSENWAMEGGMDPESLLEGDDGKTYFYQLWYDQDYARFESPPKTQPTEDNKFKFCVSCARL 301 (1002)
T ss_dssp EEEEEGGGEEEEECEEECCCCTTGGGCTTCCCCCSCCCCCCTSEEEEEEEETTTTEEECCCCCCCCTTCTTTCCHHHHHH
T ss_pred ccCCcHHHhceeeEEEEccCCcchhhhcccccccccccCCCCeEEEEEEECCCCCcccCCChhhcccccCCCcCcccccc
Confidence 999999999999999998762221 11111223567999999999999999999743210
Q ss_pred ------------c------------------------------CCC-c--------------------------------
Q 047980 313 ------------S------------------------------SET-S-------------------------------- 317 (718)
Q Consensus 313 ------------~------------------------------s~~-~-------------------------------- 317 (718)
. +++ +
T Consensus 302 e~~~~~~~~~~~~~l~~~~~~~~~~~~~~~g~~y~vgD~Vyl~p~~~~f~~~~~~~~~~~~~~~vd~~~ype~yrk~~~~ 381 (1002)
T 3swr_A 302 AEMRQKEIPRVLEQLEDLDSRVLYYSATKNGILYRVGDGVYLPPEAFTFNIKLSSPVKRPRKEPVDEDLYPEHYRKYSDY 381 (1002)
T ss_dssp HHHHHHTSCEECSEEEECSSCEEESEEEETTEEEETTCEEEECTTSCCCSSCCCCCCCCSCSCCCCTTTCTTSGGGHHHH
T ss_pred hhhhhcccCcccccccccCCcEEEEEEEECCEEEecCCEEEECCcccccccccccccccccccccccccchhhhhccchh
Confidence 0 000 0
Q ss_pred ----------c-------cc-----cc-------------------------------CC------C-------------
Q 047980 318 ----------S-------TI-----SS-------------------------------DV------D------------- 325 (718)
Q Consensus 318 ----------~-------~~-----~~-------------------------------~~------~------------- 325 (718)
+ .| +. |. +
T Consensus 382 ~kg~n~~~~~P~~IgrI~~i~~~~~~~~~~~~~~~~v~v~~fyRPed~~~~~~~~~~~D~~elf~S~~~~~~~~~~i~Gk 461 (1002)
T 3swr_A 382 IKGSNLDAPEPYRIGRIKEIFCPKKSNGRPNETDIKIRVNKFYRPENTHKSTPASYHADINLLYWSDEEAVVDFKAVQGR 461 (1002)
T ss_dssp HTCCCCCCCCCCEEEEEEEEEECCCSSSSCCSSCCEEEEEECBCGGGSTTCGGGGSSSCTTEEEECCCEEEEEGGGCCEE
T ss_pred ccccccCCCCCceeeEEeEEEecCCccccCCCccEEEEEEEEECcccccccccccccCCcceEEEecceeccCHHHcceE
Confidence 0 00 00 00 0
Q ss_pred CC-------------------------------------------ccc-----------------------cCCCCcccc
Q 047980 326 AN-------------------------------------------ECE-----------------------VGEPQKMDV 339 (718)
Q Consensus 326 ~~-------------------------------------------~~~-----------------------~~~~~~~~~ 339 (718)
|. .|. .......++
T Consensus 462 C~V~~~~d~~~~~~~~~~~~p~~fyf~~~Yd~~~~~f~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 541 (1002)
T 3swr_A 462 CTVEYGEDLPECVQVYSMGGPNRFYFLEAYNAKSKSFEDPPNHARSPGNKGKGKGKGKGKPKSQACEPSEPEIEIKLPKL 541 (1002)
T ss_dssp EEEEEGGGCSSCHHHHHHTSSSEEEEEEEEETTTTEEECCCSTTSCC----------------------CCCCCCCCCCE
T ss_pred EEEEEeccccccchhhccCCCCeEEEEEEEeCCCCeeecCccccccccccccccccccccccccccccccccccccCCCC
Confidence 10 000 001134677
Q ss_pred ceeccccccchhhHhHhhhhhhcCC-eeEeEEeecccHHHHHHHHhhCCCceeecCchHHHHHHHHHHHHhhhccccccc
Q 047980 340 KLLDLYSGCGAMSTGLCLGANLAGL-NLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWEKLCISFSLIAR 418 (718)
Q Consensus 340 ~~lDLFsG~Gg~s~Gl~~g~~~aG~-~~~~~~avd~~~~A~~t~~~N~p~~~v~~~~~~~~l~~lke~~~l~~~~~~~~~ 418 (718)
++||||||||||++|| ++||| +++ ||||+|+.|++||++|||++.+++.||.+++..+.. .++..
T Consensus 542 ~~iDLFaG~GGlslGl----~~AG~~~vv--~avEid~~A~~ty~~N~p~~~~~~~DI~~l~~~~~~-----~di~~--- 607 (1002)
T 3swr_A 542 RTLDVFSGCGGLSEGF----HQAGISDTL--WAIEMWDPAAQAFRLNNPGSTVFTEDCNILLKLVMA-----GETTN--- 607 (1002)
T ss_dssp EEEEESCTTSHHHHHH----HHHTSEEEE--EEECSSHHHHHHHHHHCTTSEEECSCHHHHHHHHHH-----TCSBC---
T ss_pred eEEEeccCccHHHHHH----HHCCCCceE--EEEECCHHHHHHHHHhCCCCccccccHHHHhhhccc-----hhhhh---
Confidence 9999999999999999 78998 665 999999999999999999999999999876421110 00000
Q ss_pred CCccccccccCCCCCCCcCCCCCCCCCCCCCchhHHHHHHHHhHhcCCchhhhcccceeeEeeccCCCCCCCCccccccc
Q 047980 419 KDPQQQLYSFNDDGESEEDDDNGNVEDESEDDSEIFEVEKILKICYGDPKEIKKRGLYLKVRWRNYGPSEDTWEPIEGLS 498 (718)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~i~~g~p~~~~~~~l~~~~~w~~~~~~~d~w~~~~~~~ 498 (718)
+
T Consensus 608 -------------------------------------------~------------------------------------ 608 (1002)
T 3swr_A 608 -------------------------------------------S------------------------------------ 608 (1002)
T ss_dssp -------------------------------------------T------------------------------------
T ss_pred -------------------------------------------h------------------------------------
Confidence 0
Q ss_pred ccccchhhhhhcccccccCCCCCCccEEEecCCCCccccccccCCCCCCcccchhhHHHHHHHHhhhcCCcEEEEecchh
Q 047980 499 NCGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVD 578 (718)
Q Consensus 499 ~~~~~i~e~~~~~~~~~l~p~~~~vDll~gGPPCQ~fS~ag~~r~~~~~~~D~rn~L~~~~~riv~~~kPk~~v~ENV~g 578 (718)
....+|.++++|||+||||||+||.+|+.+ .++.+|+||.|+.+|+++|+.++|++||||||+|
T Consensus 609 --------------~~~~lp~~~~vDll~GGpPCQ~FS~ag~~~--~~~~~d~R~~L~~~~~riv~~~rPk~~llENV~g 672 (1002)
T 3swr_A 609 --------------RGQRLPQKGDVEMLCGGPPCQGFSGMNRFN--SRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRN 672 (1002)
T ss_dssp --------------TCCBCCCTTTCSEEEECCCCTTCCSSSCCC--HHHHHHHTTSHHHHHHHHHHHHCCSEEEEEEEGG
T ss_pred --------------hhhhcccCCCeeEEEEcCCCcchhhhCCCC--CCcccchhhHHHHHHHHHHHHhCCCEEEEeccHH
Confidence 000123457899999999999999998632 1235789999999999999999999999999999
Q ss_pred hhhcccchHHHHHHHHHHhCCceEEEEEEeccccCCCCCCcEEEEEEecCCCCCCCCCCCcccccccc-CCCc-----cc
Q 047980 579 IVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRG-VIPT-----EF 652 (718)
Q Consensus 579 ll~~~~g~~~~~i~~~L~~lGY~v~~~vLnA~dyGvPQ~R~R~fivg~r~~~~~p~~P~PtH~~~~~~-~~p~-----~~ 652 (718)
|+++.++..++.++..|.++||++.+.+|||++|||||+|+|+||||++.+..+|.||.|||....+. .+.. .|
T Consensus 673 lls~~~~~~~~~i~~~L~~lGY~v~~~vLnA~dyGvPQ~R~R~fiva~r~g~~~p~~P~pth~~~~~~~~l~~~~~~~~~ 752 (1002)
T 3swr_A 673 FVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKF 752 (1002)
T ss_dssp GGTTGGGHHHHHHHHHHHHHTCEEEEEEEEGGGGTCSBCCEEEEEEEECTTSCCCCCCCCCBCCCGGGCCCCEEETTEEE
T ss_pred HhccCcchHHHHHHHHHHhcCCeEEEEEEEHHHCCCCccceEEEEEEEeCCCCCCCCCCccccccccccccccccccccc
Confidence 99998899999999999999999999999999999999999999999999999999999999754321 1111 11
Q ss_pred ccccccccccchhhccCCccHHHHhcCCCCCCCCCCCCCccCCCCCCchHHHHHhcCC
Q 047980 653 ERNTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQCFIRLRK 710 (718)
Q Consensus 653 ~~~~v~~~~~~~~~l~~~vTv~dAI~DLP~~~~~e~~~~~~Y~~~p~t~yq~~mR~~~ 710 (718)
..+. .+ ....+.+++||+|||+|||.+.+++....++|...|.+.||++||.+.
T Consensus 753 ~~~~-~~---~~~~p~~~vTV~DAIsDLP~i~~g~~~~~~~y~~~p~s~yq~~mR~~~ 806 (1002)
T 3swr_A 753 VSNI-TR---LSSGPFRTITVRDTMSDLPEVRNGASALEISYNGEPQSWFQRQLRGAQ 806 (1002)
T ss_dssp CCSC-CC---SSCCSBCCCCHHHHHTTSCCCCTTCCCSEECCCSCCCSHHHHHHHTTC
T ss_pred cccc-cc---cccCCcCCcCHHHHhhhCCccccCccccccccCCCCccHHHHHhhccc
Confidence 1010 00 011234689999999999999999988899999999999999999764
No 3
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=100.00 E-value=1.3e-72 Score=688.23 Aligned_cols=496 Identities=26% Similarity=0.449 Sum_probs=336.3
Q ss_pred CCcccccccCCCCCCCccccccCCCCCCCCCCCCccccccCCCCCCchhhccCcchhhhhhhhhcCCCCChHHHHhhhcc
Q 047980 97 SSGVKVNKNRSSSKKPIDSVKKLPVRGEHDDDDEPEARFLGDPVPDGEARQRWPKRYEVKKQKRRNQKDDDEEEIIQAKC 176 (718)
Q Consensus 97 ~~~~k~~~k~~~~~k~~~a~~~~~~~~~~~~~~~~~~~f~g~pv~~~ear~~wp~ry~~~~~~~~~~~~~~~~~~~~~r~ 176 (718)
+..-+..+++|++++++|+|..++|+.++..+.+.+.. +.+.++.+...++.......++......|.++.-....+++
T Consensus 380 c~~c~~~~k~gg~~~~kq~c~~r~c~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~W~G~p~k~~~~~~ 458 (1330)
T 3av4_A 380 CKACKDMVKFGGTGRSKQACLKRRCPNLAVKEADDDEE-ADDDVSEMPSPKKLHQGKKKKQNKDRISWLGQPMKIEENRT 458 (1330)
T ss_dssp ------------------CCCCCCCHHHHHHHHHHTTC-CCC---CCCCCCCTTCSCBCCCCCSCEEEESSCSCCC--CE
T ss_pred chhhhcccccCCcccccchhHhhhcchhhccccccccc-cccchhhcccccchhhhhhhhcccCCceEccCceeccCCce
Confidence 33347788999999999999999998654222111110 00111111000000000000011111112222212346799
Q ss_pred eeeEEEECCEEEEecCCeEEEecCC-CCCCeEEEEeEEeecCCCceEEEEEEEEecccCccccccccCCCCceEeeCCcc
Q 047980 177 HYMWAEVDGHITYDLFDDAHVKAES-GEEDYICKIVEMFEAVDGTPYFTAQWYYRARDTVIESNAHLIDQRRVFFSEIQN 255 (718)
Q Consensus 177 ~Y~s~~v~G~~~y~vGD~VyV~~~~-~~p~yIgrI~~iwe~~~g~~~v~v~WFyRpeET~~~~~~~~~d~rELF~S~~~d 255 (718)
||+++.++|. +|+|||||||.+++ +.|+|||||++||++.+|.+||+|+|||||+||+++. .++++|||+|+|+|
T Consensus 459 ~Y~~~~v~g~-~~~vGD~V~v~~~d~~~p~yiarIe~iwe~~dg~~~~~~~WfyRp~ETvlg~---~~~~rElFlS~~~d 534 (1330)
T 3av4_A 459 YYQKVSIDEE-MLEVGDCVSVIPDDSSKPLYLARVTALWEDKNGQMMFHAHWFCAGTDTVLGA---TSDPLELFLVGECE 534 (1330)
T ss_dssp EECSEEEESS-EEETTCEEEECBCCSSCCCEEEEEEEEEEETTCCEEEEEEEEEEGGGSTTGG---GSCTTEEEEEEEEE
T ss_pred eeeEEEECCE-EEecCCEEEEeCCCCCCCCEEEEEeeeeecCCCCEEEEEEEEEchHHccccc---ccCCCeEEEecccc
Confidence 9999999999 99999999999987 5678999999999999999999999999999999665 38899999999999
Q ss_pred ccccccccceeEEEeeCCccch-------hhh--hccCCCCcEEEeeeeeCCCCeeeCCCccCc----------------
Q 047980 256 DNPLECLVKKLNIARVPLNIDL-------EAK--KLAIPHCDYYCDMMYLLPYSTFFSLPPENK---------------- 310 (718)
Q Consensus 256 ~~~l~~I~gKC~V~~~~~~~~~-------~~~--~~~~~~~dfyc~~~Yd~~~~~F~~lp~e~~---------------- 310 (718)
+++|++|.|||+|+++++..+. ... ......++|||++.|++.+++|.+||.+..
T Consensus 535 ~~~l~~I~gKC~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~C~~~Yd~~~~~F~~lp~~~~~~~~~~~~C~sC~~~e 614 (1330)
T 3av4_A 535 NMQLSYIHSKVKVIYKAPSENWAMEGGTDPETTLPGAEDGKTYFFQLWYNQEYARFESPPKTQPTEDNKHKFCLSCIRLA 614 (1330)
T ss_dssp EEEGGGEEEEECEEECCCCTTSTTCCC-------------CCEEEEEEEETTTTEEECCCCCCCCGGGSSSCCHHHHHHH
T ss_pred cCcHHHhcceeEEEEeccchhhhhhcccCccccccccccCCceEEEeEECCccCccCCcCcCCcccccCccccchhhhhh
Confidence 9999999999999998764331 000 112345679999999999999999998421
Q ss_pred ---------ccc------------------------------CCC-----------------------------------
Q 047980 311 ---------RVS------------------------------SET----------------------------------- 316 (718)
Q Consensus 311 ---------~~~------------------------------s~~----------------------------------- 316 (718)
... ++.
T Consensus 615 ~~~~ke~~~v~~~~~~~~~~~~Y~~~~~~g~~Y~vgD~Vyl~p~~f~~~~~~~~~~~~~~~~~~~~~~ype~yrk~~~~~ 694 (1330)
T 3av4_A 615 ELRQKEMPKVLEQIEEVDGRVYCSSITKNGVVYRLGDSVYLPPEAFTFNIKVASPVKRPKKDPVNETLYPEHYRKYSDYI 694 (1330)
T ss_dssp HHHHHHSCEEEEEEEESSSSEEEEEEEETTEEEETTCEEEECTTSCCCCCCC-------CCCCCCTTTCSSGGGGGC---
T ss_pred hhhhccccccccccccccCceeeeEEEECCEEEecCCEEEECcccccccccccccccccccccccccccchhhhcccccc
Confidence 000 000
Q ss_pred -----------------------cc-------------------ccc--------cCC-------------------CCC
Q 047980 317 -----------------------SS-------------------TIS--------SDV-------------------DAN 327 (718)
Q Consensus 317 -----------------------~~-------------------~~~--------~~~-------------------~~~ 327 (718)
.+ -++ .+. -|.
T Consensus 695 kg~~~~~~~Py~IgqI~eI~~~~~s~~~~~~~~~vrV~wFyRPedt~~~~~~~~~~D~nELf~S~~~~~vp~~~I~GKC~ 774 (1330)
T 3av4_A 695 KGSNLDAPEPYRIGRIKEIHCGKKKGKVNEADIKLRLYKFYRPENTHRSYNGSYHTDINMLYWSDEEAVVNFSDVQGRCT 774 (1330)
T ss_dssp ----CCCCCCCEEEEEEECCCCEETTEECSSCCEEEEEEEECTTTSTTGGGTTTTSCTTBCEEEEEEEEEEGGGCCEEEE
T ss_pred cccccCCCCCceEEEEEEEEecCCccccCCCceEEEEEEeeChhhcccccccccccCcceEEeeccceecCHHHcCceEE
Confidence 00 000 000 010
Q ss_pred --------c--------------cc---------------------cC-----------------------CCCccccce
Q 047980 328 --------E--------------CE---------------------VG-----------------------EPQKMDVKL 341 (718)
Q Consensus 328 --------~--------------~~---------------------~~-----------------------~~~~~~~~~ 341 (718)
. |. .. .....++++
T Consensus 775 V~~~~d~~~~i~~y~~~g~d~Fy~~~~Yd~~~k~~~~~P~~~~~~~~~~~~k~~g~~~~~~~~~~~~~~~~~~~~~~l~v 854 (1330)
T 3av4_A 775 VEYGEDLLESIQDYSQGGPDRFYFLEAYNSKTKNFEDPPNHARSPGNKGKGKGKGKGKGKHQVSEPKEPEAAIKLPKLRT 854 (1330)
T ss_dssp EEESTTCSSCHHHHHHTSTTEEEESCEEETTTTEEECCCGGGCC-----------------------------CCCCEEE
T ss_pred EEecccccccccccccCCCCeEEEEEEecccCCeeccCchHhhcccccccccccccccccccccccccchhhhccCCceE
Confidence 0 00 00 002356889
Q ss_pred eccccccchhhHhHhhhhhhcCC-eeEeEEeecccHHHHHHHHhhCCCceeecCchHHHHHHHHHHHHhhhcccccccCC
Q 047980 342 LDLYSGCGAMSTGLCLGANLAGL-NLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWEKLCISFSLIARKD 420 (718)
Q Consensus 342 lDLFsG~Gg~s~Gl~~g~~~aG~-~~~~~~avd~~~~A~~t~~~N~p~~~v~~~~~~~~l~~lke~~~l~~~~~~~~~~~ 420 (718)
||||||||||++|| ++||+ +++ ||||+|+.|++||++|||++.+++.|+.+++..+ +..++...
T Consensus 855 iDLFsG~GGlslGf----e~AG~~~vv--~avEid~~A~~ty~~N~p~~~~~~~DI~~l~~~~-----~~gdi~~~---- 919 (1330)
T 3av4_A 855 LDVFSGCGGLSEGF----HQAGISETL--WAIEMWDPAAQAFRLNNPGTTVFTEDCNVLLKLV-----MAGEVTNS---- 919 (1330)
T ss_dssp EEETCTTSHHHHHH----HHTTSEEEE--EEECCSHHHHHHHHHHCTTSEEECSCHHHHHHHH-----TTTCSBCS----
T ss_pred EecccCccHHHHHH----HHCCCCceE--EEEECCHHHHHHHHHhCCCCcEeeccHHHHhHhh-----hccchhhh----
Confidence 99999999999999 78998 555 9999999999999999999999999998764110 00000000
Q ss_pred ccccccccCCCCCCCcCCCCCCCCCCCCCchhHHHHHHHHhHhcCCchhhhcccceeeEeeccCCCCCCCCccccccccc
Q 047980 421 PQQQLYSFNDDGESEEDDDNGNVEDESEDDSEIFEVEKILKICYGDPKEIKKRGLYLKVRWRNYGPSEDTWEPIEGLSNC 500 (718)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~i~~g~p~~~~~~~l~~~~~w~~~~~~~d~w~~~~~~~~~ 500 (718)
T Consensus 920 -------------------------------------------------------------------------------- 919 (1330)
T 3av4_A 920 -------------------------------------------------------------------------------- 919 (1330)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccchhhhhhcccccccCCCCCCccEEEecCCCCccccccccCCCCCCcccchhhHHHHHHHHhhhcCCcEEEEecchhhh
Q 047980 501 GEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVDIV 580 (718)
Q Consensus 501 ~~~i~e~~~~~~~~~l~p~~~~vDll~gGPPCQ~fS~ag~~r~~~~~~~D~rn~L~~~~~riv~~~kPk~~v~ENV~gll 580 (718)
....+|..+++|||+||||||+||.+|+++. ++.+|+||.|+.+|+++|+.++|++||||||+||+
T Consensus 920 ------------~~~~lp~~~~vDvl~GGpPCQ~FS~agr~~~--~~~~d~R~~L~~~~lriv~~~rPk~fv~ENV~gll 985 (1330)
T 3av4_A 920 ------------LGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFV 985 (1330)
T ss_dssp ------------SCCBCCCTTTCSEEEECCCCTTTCSSSCCCH--HHHHHHHHSHHHHHHHHHHHHCCSEEEEEEEGGGG
T ss_pred ------------hhhhccccCccceEEecCCCccccccccccc--ccccchhhHHHHHHHHHHHHhcCcEEEEeccHHHh
Confidence 0001234478999999999999999996421 23578999999999999999999999999999999
Q ss_pred hcccchHHHHHHHHHHhCCceEEEEEEeccccCCCCCCcEEEEEEecCCCCCCCCCCCcccccccc-CCC-----ccccc
Q 047980 581 KFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRG-VIP-----TEFER 654 (718)
Q Consensus 581 ~~~~g~~~~~i~~~L~~lGY~v~~~vLnA~dyGvPQ~R~R~fivg~r~~~~~p~~P~PtH~~~~~~-~~p-----~~~~~ 654 (718)
++.+|.+++.++..|.++||++.+.+|||++|||||+|+|+||||++.+..+|.||.|||...... .+. ..|..
T Consensus 986 s~~~g~~~~~il~~L~~lGY~v~~~vLnA~dyGVPQ~R~Rvfivg~r~~~~~~~fP~pth~~~~~~~~l~~~~~~~~~~~ 1065 (1330)
T 3av4_A 986 SYRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVS 1065 (1330)
T ss_dssp TTTTTHHHHHHHHHHHHHTCEEEEEEEEGGGGSCSBCCEEEEEEEECTTSCCCCCCCCCBCCCGGGCCCCEEETTEEECC
T ss_pred ccCccHHHHHHHHHHHhcCCeeeEEEecHHHcCCCccccEEEEEEecCCCcccCCCCccccccccccccccccccccccc
Confidence 998899999999999999999999999999999999999999999999988889999999643211 000 01111
Q ss_pred ccccccccchhhccCCccHHHHhcCCCCCCCCCCCCCccCCCCCCchHHHHHhcCC
Q 047980 655 NTVAYDEGQQAELARKLLLQDAISDLPSVDNYESRDEIPYDREPETEFQCFIRLRK 710 (718)
Q Consensus 655 ~~v~~~~~~~~~l~~~vTv~dAI~DLP~~~~~e~~~~~~Y~~~p~t~yq~~mR~~~ 710 (718)
+. .+. .....+++||+|||+|||.+.++.....+.|...+.+.||+.||...
T Consensus 1066 ~i-~~~---~~~p~~~vTV~DAI~DLP~i~~g~~~~~~~y~~~p~s~~q~~iR~~~ 1117 (1330)
T 3av4_A 1066 NI-TRL---SSGPFRTITVRDTMSDLPEIQNGASNSEIPYNGEPLSWFQRQLRGSH 1117 (1330)
T ss_dssp SC-CCS---SCCSBCCCCHHHHHTTSCCCCTTCCCSEEECCSCCCSHHHHHHHCSS
T ss_pred cc-ccc---ccCCcCCCcHHHHhhcCcccccCCcccccccCCCcccHHHHHhhccc
Confidence 10 000 01123568999999999999988776778888888999999999765
No 4
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=100.00 E-value=3.7e-47 Score=416.15 Aligned_cols=228 Identities=26% Similarity=0.381 Sum_probs=184.5
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCCCceeecCchHHHHHHHHHHHHhhhccccc
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWEKLCISFSLI 416 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p~~~v~~~~~~~~l~~lke~~~l~~~~~~~ 416 (718)
+++++|||||||||+++|| +++|++++ ||||+|+.|++||+.|||++.+++.||.++.
T Consensus 1 m~~~vidLFsG~GGlslG~----~~aG~~~v--~avE~d~~a~~t~~~N~~~~~~~~~DI~~~~---------------- 58 (376)
T 3g7u_A 1 MSLNVIDLFSGVGGLSLGA----ARAGFDVK--MAVEIDQHAINTHAINFPRSLHVQEDVSLLN---------------- 58 (376)
T ss_dssp -CCEEEEETCTTSHHHHHH----HHHTCEEE--EEECSCHHHHHHHHHHCTTSEEECCCGGGCC----------------
T ss_pred CCCeEEEEccCcCHHHHHH----HHCCCcEE--EEEeCCHHHHHHHHHhCCCCceEecChhhcC----------------
Confidence 3689999999999999999 78999987 8999999999999999999999888885531
Q ss_pred ccCCccccccccCCCCCCCcCCCCCCCCCCCCCchhHHHHHHHHhHhcCCchhhhcccceeeEeeccCCCCCCCCccccc
Q 047980 417 ARKDPQQQLYSFNDDGESEEDDDNGNVEDESEDDSEIFEVEKILKICYGDPKEIKKRGLYLKVRWRNYGPSEDTWEPIEG 496 (718)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~i~~g~p~~~~~~~l~~~~~w~~~~~~~d~w~~~~~ 496 (718)
..+ +...
T Consensus 59 ----------------------------------~~~-----~~~~---------------------------------- 65 (376)
T 3g7u_A 59 ----------------------------------AEI-----IKGF---------------------------------- 65 (376)
T ss_dssp ----------------------------------HHH-----HHHH----------------------------------
T ss_pred ----------------------------------HHH-----HHhh----------------------------------
Confidence 000 0000
Q ss_pred ccccccchhhhhhcccccccCCCCCCccEEEecCCCCccccccccCCCCCCcccchhhHHHHHHHHhhhcCCcEEEEecc
Q 047980 497 LSNCGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENV 576 (718)
Q Consensus 497 ~~~~~~~i~e~~~~~~~~~l~p~~~~vDll~gGPPCQ~fS~ag~~r~~~~~~~D~rn~L~~~~~riv~~~kPk~~v~ENV 576 (718)
....+++|+|+||||||+||.+|++ +.+|+|+.|+.+|+++|+.++|++||||||
T Consensus 66 --------------------~~~~~~~D~i~ggpPCQ~fS~ag~~-----~~~d~r~~L~~~~~~~v~~~~P~~~v~ENV 120 (376)
T 3g7u_A 66 --------------------FKNDMPIDGIIGGPPCQGFSSIGKG-----NPDDSRNQLYMHFYRLVSELQPLFFLAENV 120 (376)
T ss_dssp --------------------HCSCCCCCEEEECCCCCTTC------------CHHHHHHHHHHHHHHHHHCCSEEEEEEC
T ss_pred --------------------cccCCCeeEEEecCCCCCcccccCC-----CCCCchHHHHHHHHHHHHHhCCCEEEEecc
Confidence 0012579999999999999999863 468999999999999999999999999999
Q ss_pred hhhhhcccchHHHHHHHHHHhCCceE-EEEEEeccccCCCCCCcEEEEEEecCCCCCCCCCCCccccccccCCCcccccc
Q 047980 577 VDIVKFAKGLLGRYALARLIQMNYQV-RMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHDVVLRGVIPTEFERN 655 (718)
Q Consensus 577 ~gll~~~~g~~~~~i~~~L~~lGY~v-~~~vLnA~dyGvPQ~R~R~fivg~r~~~~~p~~P~PtH~~~~~~~~p~~~~~~ 655 (718)
+||++..++.+++.++ .|.++||++ .+.+|||++|||||+|+|+||||++++..+|.| .|||...
T Consensus 121 ~gl~s~~~~~~~~~i~-~l~~~GY~v~~~~vl~a~dyGvPQ~R~R~~iig~r~~~~~~~~-~p~~~~~------------ 186 (376)
T 3g7u_A 121 PGIMQEKYSGIRNKAF-NLVSGDYDILDPIKVKASDYGAPTIRTRYFFIGVKKSLKLDIS-DEVFMPK------------ 186 (376)
T ss_dssp TTTTCGGGHHHHHHHH-HHHHTTEEECCCEEEEGGGGTCSBCCEEEEEEEEEGGGCCCCC-GGGTSCC------------
T ss_pred hHhhccCcHHHHHHHH-HHHcCCCccCcEEEEEHhhCCCCCCCcEEEEEEEeCCCCCCcc-ccccccc------------
Confidence 9999988888999999 999999999 999999999999999999999999999877655 6776421
Q ss_pred cccccccchhhccCCccHHHHhcCCCCCCC-CCCC---CCccCCCCCCchHHHHHhcC
Q 047980 656 TVAYDEGQQAELARKLLLQDAISDLPSVDN-YESR---DEIPYDREPETEFQCFIRLR 709 (718)
Q Consensus 656 ~v~~~~~~~~~l~~~vTv~dAI~DLP~~~~-~e~~---~~~~Y~~~p~t~yq~~mR~~ 709 (718)
+.+++||+|||+|||.+.+ ++.. ....|...+.+.||+.||..
T Consensus 187 -----------~~~~~tv~dai~dlp~~~~~~~~~~~~~~~~~~~~~~~~y~~~~r~~ 233 (376)
T 3g7u_A 187 -----------MIDPVTVKDALYGLPDIIDANWQSDSESWRTIKKDRKGGFYEKLWGQ 233 (376)
T ss_dssp -----------SCCCCCHHHHTTTCCSSCEEESSCSSCCCEECCCCCCSHHHHHHHCC
T ss_pred -----------cCCCCcHHHHHhcCCcccccccccccccccccCccCccHHHHHhhcC
Confidence 3467999999999999876 3322 22334344779999999976
No 5
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=100.00 E-value=6.3e-46 Score=397.52 Aligned_cols=169 Identities=25% Similarity=0.420 Sum_probs=150.2
Q ss_pred cceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCCCceeecCchHHHHHHHHHHHHhhhccccccc
Q 047980 339 VKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWEKLCISFSLIAR 418 (718)
Q Consensus 339 ~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p~~~v~~~~~~~~l~~lke~~~l~~~~~~~~~ 418 (718)
|++||||||||||++|| ++|||+++ ||+|+|+.|++||++|||+ .+++.||.++ +
T Consensus 1 mkvidLFsG~GG~~~G~----~~aG~~~v--~a~e~d~~a~~ty~~N~~~-~~~~~DI~~i-----------------~- 55 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGF----QKAGFRII--CANEYDKSIWKTYESNHSA-KLIKGDISKI-----------------S- 55 (331)
T ss_dssp CEEEEESCTTCHHHHHH----HHTTCEEE--EEEECCTTTHHHHHHHCCS-EEEESCGGGC-----------------C-
T ss_pred CeEEEeCcCccHHHHHH----HHCCCEEE--EEEeCCHHHHHHHHHHCCC-CcccCChhhC-----------------C-
Confidence 68999999999999999 78999987 9999999999999999996 4555666332 0
Q ss_pred CCccccccccCCCCCCCcCCCCCCCCCCCCCchhHHHHHHHHhHhcCCchhhhcccceeeEeeccCCCCCCCCccccccc
Q 047980 419 KDPQQQLYSFNDDGESEEDDDNGNVEDESEDDSEIFEVEKILKICYGDPKEIKKRGLYLKVRWRNYGPSEDTWEPIEGLS 498 (718)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~i~~g~p~~~~~~~l~~~~~w~~~~~~~d~w~~~~~~~ 498 (718)
.
T Consensus 56 --------------------------------~----------------------------------------------- 56 (331)
T 3ubt_Y 56 --------------------------------S----------------------------------------------- 56 (331)
T ss_dssp --------------------------------G-----------------------------------------------
T ss_pred --------------------------------H-----------------------------------------------
Confidence 0
Q ss_pred ccccchhhhhhcccccccCCCCCCccEEEecCCCCccccccccCCCCCCcccchhhHHHHHHHHhhhcCCcEEEEecchh
Q 047980 499 NCGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLMENVVD 578 (718)
Q Consensus 499 ~~~~~i~e~~~~~~~~~l~p~~~~vDll~gGPPCQ~fS~ag~~r~~~~~~~D~rn~L~~~~~riv~~~kPk~~v~ENV~g 578 (718)
.+ + +++|||+||||||+||.+|+++ +.+|+|+.||.+|+|+|+.++|++||||||+|
T Consensus 57 ------~~----------~---~~~D~l~ggpPCQ~fS~ag~~~----g~~d~R~~L~~~~~r~i~~~~Pk~~~~ENV~g 113 (331)
T 3ubt_Y 57 ------DE----------F---PKCDGIIGGPPSQSWSEGGSLR----GIDDPRGKLFYEYIRILKQKKPIFFLAENVKG 113 (331)
T ss_dssp ------GG----------S---CCCSEEECCCCGGGTEETTEEC----CTTCGGGHHHHHHHHHHHHHCCSEEEEEECCG
T ss_pred ------hh----------C---CcccEEEecCCCCCcCCCCCcc----CCCCchhHHHHHHHHHHhccCCeEEEeeeecc
Confidence 00 0 3689999999999999999755 46899999999999999999999999999999
Q ss_pred hhhcccchHHHHHHHHHHhCCceEEEEEEeccccCCCCCCcEEEEEEecCCCCCCC
Q 047980 579 IVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPP 634 (718)
Q Consensus 579 ll~~~~g~~~~~i~~~L~~lGY~v~~~vLnA~dyGvPQ~R~R~fivg~r~~~~~p~ 634 (718)
|++..++..++.+++.|.++||++.+.+|||++|||||+|+|+||||++++...+.
T Consensus 114 l~~~~~~~~~~~i~~~l~~~GY~v~~~vlna~~yGvPQ~R~Rvfivg~r~~~~~~~ 169 (331)
T 3ubt_Y 114 MMAQRHNKAVQEFIQEFDNAGYDVHIILLNANDYGVAQDRKRVFYIGFRKELNINY 169 (331)
T ss_dssp GGGCTTSHHHHHHHHHHHHHTEEEEEEEEEGGGTTCSBCCEEEEEEEEEGGGCCCC
T ss_pred cccccccchhhhhhhhhccCCcEEEEEecccccCCCCcccceEEEEEEcCCCCcCC
Confidence 99999999999999999999999999999999999999999999999999876543
No 6
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=100.00 E-value=4e-42 Score=369.88 Aligned_cols=179 Identities=23% Similarity=0.395 Sum_probs=154.8
Q ss_pred CccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCCCceeecCchHHHHHHHHHHHHhhhccc
Q 047980 335 QKMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWEKLCISFS 414 (718)
Q Consensus 335 ~~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p~~~v~~~~~~~~l~~lke~~~l~~~~~ 414 (718)
+...+++|||||||||+++|| +++|++++ ||||+|+.|++||+.|||++. +.||.++
T Consensus 8 ~~~~~~~~dLFaG~Gg~~~g~----~~aG~~~v--~~~e~d~~a~~t~~~N~~~~~--~~Di~~~--------------- 64 (327)
T 2c7p_A 8 QLTGLRFIDLFAGLGGFRLAL----ESCGAECV--YSNEWDKYAQEVYEMNFGEKP--EGDITQV--------------- 64 (327)
T ss_dssp TTTTCEEEEETCTTTHHHHHH----HHTTCEEE--EEECCCHHHHHHHHHHHSCCC--BSCGGGS---------------
T ss_pred ccCCCcEEEECCCcCHHHHHH----HHCCCeEE--EEEeCCHHHHHHHHHHcCCCC--cCCHHHc---------------
Confidence 355789999999999999999 78999887 899999999999999999864 4555321
Q ss_pred ccccCCccccccccCCCCCCCcCCCCCCCCCCCCCchhHHHHHHHHhHhcCCchhhhcccceeeEeeccCCCCCCCCccc
Q 047980 415 LIARKDPQQQLYSFNDDGESEEDDDNGNVEDESEDDSEIFEVEKILKICYGDPKEIKKRGLYLKVRWRNYGPSEDTWEPI 494 (718)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~i~~g~p~~~~~~~l~~~~~w~~~~~~~d~w~~~ 494 (718)
. +
T Consensus 65 --~-------------------------------------------------~--------------------------- 66 (327)
T 2c7p_A 65 --N-------------------------------------------------E--------------------------- 66 (327)
T ss_dssp --C-------------------------------------------------G---------------------------
T ss_pred --C-------------------------------------------------H---------------------------
Confidence 0 0
Q ss_pred ccccccccchhhhhhcccccccCCCCCCccEEEecCCCCccccccccCCCCCCcccchhhHHHHHHHHhhhcCCcEEEEe
Q 047980 495 EGLSNCGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPKFVLME 574 (718)
Q Consensus 495 ~~~~~~~~~i~e~~~~~~~~~l~p~~~~vDll~gGPPCQ~fS~ag~~r~~~~~~~D~rn~L~~~~~riv~~~kPk~~v~E 574 (718)
.. + +++|+|+||||||+||.+|+++ +.+|+|+.|+.+|+|+|+.++|++||||
T Consensus 67 -------------------~~-~---~~~D~l~~gpPCQ~fS~ag~~~----g~~d~r~~L~~~~~r~i~~~~P~~~~~E 119 (327)
T 2c7p_A 67 -------------------KT-I---PDHDILCAGFPCQAFSISGKQK----GFEDSRGTLFFDIARIVREKKPKVVFME 119 (327)
T ss_dssp -------------------GG-S---CCCSEEEEECCCTTTCTTSCCC----GGGSTTSCHHHHHHHHHHHHCCSEEEEE
T ss_pred -------------------hh-C---CCCCEEEECCCCCCcchhcccC----CCcchhhHHHHHHHHHHHhccCcEEEEe
Confidence 00 1 2589999999999999999743 4679999999999999999999999999
Q ss_pred cchhhhhcccchHHHHHHHHHHhCCceEEEEEEeccccCCCCCCcEEEEEEecCCCC--CCCCCCCccc
Q 047980 575 NVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEK--LPPYALPTHD 641 (718)
Q Consensus 575 NV~gll~~~~g~~~~~i~~~L~~lGY~v~~~vLnA~dyGvPQ~R~R~fivg~r~~~~--~p~~P~PtH~ 641 (718)
||+||++..+|..++.+++.|.++||.+.+.+|||++|||||+|+|+||||++.+.. .+.||.|+|.
T Consensus 120 NV~gl~~~~~~~~~~~i~~~l~~~GY~v~~~vl~a~~~GvPQ~R~R~~iv~~~~~~~~~~~~fP~~~~~ 188 (327)
T 2c7p_A 120 NVKNFASHDNGNTLEVVKNTMNELDYSFHAKVLNALDYGIPQKRERIYMICFRNDLNIQNFQFPKPFEL 188 (327)
T ss_dssp EEGGGGTGGGGHHHHHHHHHHHHTTBCCEEEEEEGGGGTCSBCCEEEEEEEEBGGGCCCCCCCCCCCCC
T ss_pred CcHHHHhccccHHHHHHHHHHHhCCCEEEEEEEEHHHcCCCccceEEEEEEEeCCCCcccccCCCCcCC
Confidence 999999988889999999999999999999999999999999999999999998754 2467777764
No 7
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=100.00 E-value=9.9e-40 Score=351.11 Aligned_cols=178 Identities=22% Similarity=0.371 Sum_probs=152.2
Q ss_pred CccccceeccccccchhhHhHhhhhhhcCCeeEeE-EeecccHHHHHHHHhhCCCceeecCchHHHHHHHHHHHHhhhcc
Q 047980 335 QKMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTR-WAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWEKLCISF 413 (718)
Q Consensus 335 ~~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~-~avd~~~~A~~t~~~N~p~~~v~~~~~~~~l~~lke~~~l~~~~ 413 (718)
..+++++|||||||||+++|| +++|+...++ ||+|+|+.|++||+.|||++ +++.||.++
T Consensus 7 ~~~~~~vidLFaG~GG~~~G~----~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~~-~~~~DI~~~-------------- 67 (327)
T 3qv2_A 7 QQKQVNVIEFFSGIGGLRSSY----ERSSININATFIPFDINEIANKIYSKNFKEE-VQVKNLDSI-------------- 67 (327)
T ss_dssp -CCCEEEEEETCTTTHHHHHH----HHSSCCCCEEEEEECCCHHHHHHHHHHHCCC-CBCCCTTTC--------------
T ss_pred cCCCCEEEEECCChhHHHHHH----HHcCCCceEEEEEEECCHHHHHHHHHHCCCC-cccCChhhc--------------
Confidence 356899999999999999999 7899865667 89999999999999999987 555555332
Q ss_pred cccccCCccccccccCCCCCCCcCCCCCCCCCCCCCchhHHHHHHHHhHhcCCchhhhcccceeeEeeccCCCCCCCCcc
Q 047980 414 SLIARKDPQQQLYSFNDDGESEEDDDNGNVEDESEDDSEIFEVEKILKICYGDPKEIKKRGLYLKVRWRNYGPSEDTWEP 493 (718)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~i~~g~p~~~~~~~l~~~~~w~~~~~~~d~w~~ 493 (718)
+ .++
T Consensus 68 ---~---------------------------------~~~---------------------------------------- 71 (327)
T 3qv2_A 68 ---S---------------------------------IKQ---------------------------------------- 71 (327)
T ss_dssp ---C---------------------------------HHH----------------------------------------
T ss_pred ---C---------------------------------HHH----------------------------------------
Confidence 0 000
Q ss_pred cccccccccchhhhhhcccccccCCCCCCccEEEecCCCCcc--ccccccCCCCCCcccchhhHHHHHHH-Hhhhc--CC
Q 047980 494 IEGLSNCGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGV--SGFNRFRNKDNPLADEKNKQLIVFMD-IVDFL--KP 568 (718)
Q Consensus 494 ~~~~~~~~~~i~e~~~~~~~~~l~p~~~~vDll~gGPPCQ~f--S~ag~~r~~~~~~~D~rn~L~~~~~r-iv~~~--kP 568 (718)
+. ..++|+|+||||||+| |.+|+++ +.+|+|+.||.++++ +|+.+ +|
T Consensus 72 ----------i~--------------~~~~Dil~ggpPCQ~fs~S~ag~~~----~~~d~r~~L~~~~~r~~i~~~~~~P 123 (327)
T 3qv2_A 72 ----------IE--------------SLNCNTWFMSPPCQPYNNSIMSKHK----DINDPRAKSVLHLYRDILPYLINKP 123 (327)
T ss_dssp ----------HH--------------HTCCCEEEECCCCTTCSHHHHTTTC----TTTCGGGHHHHHHHHTTGGGCSSCC
T ss_pred ----------hc--------------cCCCCEEEecCCccCcccccCCCCC----CCccccchhHHHHHHHHHHHhccCC
Confidence 00 0258999999999999 9998754 458999999999999 99999 99
Q ss_pred cEEEEecchhhhhcccchHHHHHHHHHHhCCceEEEEEEeccccCCCCCCcEEEEEEecCCCCCCCCCCCccc
Q 047980 569 KFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHD 641 (718)
Q Consensus 569 k~~v~ENV~gll~~~~g~~~~~i~~~L~~lGY~v~~~vLnA~dyGvPQ~R~R~fivg~r~~~~~p~~P~PtH~ 641 (718)
++|+||||+||++. ..++.+++.|+++||.+.+.+|||++|||||+|+|+||||.+++ +.||.|+|.
T Consensus 124 ~~~~lENV~gl~~~---~~~~~i~~~l~~~GY~v~~~vl~a~~yGvPQ~R~R~fivg~r~~---f~fP~~~~~ 190 (327)
T 3qv2_A 124 KHIFIENVPLFKES---LVFKEIYNILIKNQYYIKDIICSPIDIGIPNSRTRYYVMARLTP---FKNEIQLHQ 190 (327)
T ss_dssp SEEEEEECGGGGGS---HHHHHHHHHHHHTTCEEEEEEECGGGGTCSBCCCEEEEEEESSC---CCSCCCCCC
T ss_pred CEEEEEchhhhcCh---HHHHHHHHHHHhCCCEEEEEEEeHHHcCCCccceEEEEEEEeCC---CCCCCcccc
Confidence 99999999999874 57889999999999999999999999999999999999999988 578888886
No 8
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=100.00 E-value=1.7e-39 Score=350.25 Aligned_cols=170 Identities=28% Similarity=0.429 Sum_probs=147.0
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCCCceeecCchHHHHHHHHHHHHhhhccccc
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWEKLCISFSLI 416 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p~~~v~~~~~~~~l~~lke~~~l~~~~~~~ 416 (718)
+++++|||||||||+++|| +++|+...++||+|+|+.|++||++|||++.+++.||.++.
T Consensus 2 m~~~~idLFaG~GG~~~G~----~~aG~~~~~v~a~e~d~~a~~ty~~N~~~~~~~~~DI~~~~---------------- 61 (333)
T 4h0n_A 2 MSHKILELYSGIGGMHCAW----KESGLDGEIVAAVDINTVANSVYKHNFPETNLLNRNIQQLT---------------- 61 (333)
T ss_dssp -CEEEEEETCTTTHHHHHH----HHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECCCGGGCC----------------
T ss_pred CCCEEEEECcCccHHHHHH----HHcCCCceEEEEEeCCHHHHHHHHHhCCCCceeccccccCC----------------
Confidence 5789999999999999999 78898444459999999999999999999988887775430
Q ss_pred ccCCccccccccCCCCCCCcCCCCCCCCCCCCCchhHHHHHHHHhHhcCCchhhhcccceeeEeeccCCCCCCCCccccc
Q 047980 417 ARKDPQQQLYSFNDDGESEEDDDNGNVEDESEDDSEIFEVEKILKICYGDPKEIKKRGLYLKVRWRNYGPSEDTWEPIEG 496 (718)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~i~~g~p~~~~~~~l~~~~~w~~~~~~~d~w~~~~~ 496 (718)
..+
T Consensus 62 ----------------------------------~~~------------------------------------------- 64 (333)
T 4h0n_A 62 ----------------------------------PQV------------------------------------------- 64 (333)
T ss_dssp ----------------------------------HHH-------------------------------------------
T ss_pred ----------------------------------HHH-------------------------------------------
Confidence 000
Q ss_pred ccccccchhhhhhcccccccCCCCCCccEEEecCCCCccccccccCCCCCCcccchhhHHHHHHHHhhhcC-CcEEEEec
Q 047980 497 LSNCGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLK-PKFVLMEN 575 (718)
Q Consensus 497 ~~~~~~~i~e~~~~~~~~~l~p~~~~vDll~gGPPCQ~fS~ag~~r~~~~~~~D~rn~L~~~~~riv~~~k-Pk~~v~EN 575 (718)
+. ..++|||+||||||+||.+|+++ +.+|+|+.||++++++|+.++ |++|||||
T Consensus 65 -------~~--------------~~~~D~l~ggpPCQ~fS~ag~~~----~~~d~r~~L~~~~~r~i~~~~~P~~~vlEN 119 (333)
T 4h0n_A 65 -------IK--------------KWNVDTILMSPPCQPFTRNGKYL----DDNDPRTNSFLYLIGILDQLDNVDYILMEN 119 (333)
T ss_dssp -------HH--------------HTTCCEEEECCCCCCSEETTEEC----CTTCTTSCCHHHHHHHGGGCTTCCEEEEEE
T ss_pred -------hc--------------cCCCCEEEecCCCcchhhhhhcc----CCcCcccccHHHHHHHHHHhcCCCEEEEec
Confidence 00 02589999999999999999754 458999999999999999997 99999999
Q ss_pred chhhhhcccchHHHHHHHHHHhCCceEEEEEEeccccCCCCCCcEEEEEEecCCCC
Q 047980 576 VVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEK 631 (718)
Q Consensus 576 V~gll~~~~g~~~~~i~~~L~~lGY~v~~~vLnA~dyGvPQ~R~R~fivg~r~~~~ 631 (718)
|+||++. ..++.+++.|.++||.+.+.+|||++|||||+|+|+||||.+.+..
T Consensus 120 V~gl~~~---~~~~~i~~~l~~~GY~v~~~vl~a~~~GvPQ~R~R~fiva~r~~~~ 172 (333)
T 4h0n_A 120 VKGFENS---TVRNLFIDKLKECNFIYQEFLLCPSTVGVPNSRLRYYCTARRNNLT 172 (333)
T ss_dssp CTTGGGS---HHHHHHHHHHHHTTEEEEEEEECTTTTTCSCCCCEEEEEEEETTSC
T ss_pred chhhhhh---hHHHHHHHHHHhCCCeEEEEEecHHHcCCCccceEEEEEEEeCCCC
Confidence 9999874 3578899999999999999999999999999999999999999864
No 9
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=100.00 E-value=9e-39 Score=345.90 Aligned_cols=178 Identities=25% Similarity=0.429 Sum_probs=136.5
Q ss_pred ccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCCCceeecCchHHHHHHHHHHHHhhhcccccc
Q 047980 338 DVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWEKLCISFSLIA 417 (718)
Q Consensus 338 ~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p~~~v~~~~~~~~l~~lke~~~l~~~~~~~~ 417 (718)
++++||||||+||+++|| +.+|++..++||||+|+.|++||+.|||++.+++.||.++.
T Consensus 2 ~~~v~dLFaG~Gg~~~g~----~~~G~~~~~v~~~E~d~~a~~~~~~N~~~~~~~~~Di~~~~----------------- 60 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHAL----RESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGIT----------------- 60 (343)
T ss_dssp CEEEEEETCTTCHHHHHH----HHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECSCGGGCC-----------------
T ss_pred CCeEEEeCcCccHHHHHH----HHCCCCceEEEEEeCCHHHHHHHHHhccccccccCCHHHcc-----------------
Confidence 578999999999999999 78895433449999999999999999999888777775431
Q ss_pred cCCccccccccCCCCCCCcCCCCCCCCCCCCCchhHHHHHHHHhHhcCCchhhhcccceeeEeeccCCCCCCCCcccccc
Q 047980 418 RKDPQQQLYSFNDDGESEEDDDNGNVEDESEDDSEIFEVEKILKICYGDPKEIKKRGLYLKVRWRNYGPSEDTWEPIEGL 497 (718)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~i~~g~p~~~~~~~l~~~~~w~~~~~~~d~w~~~~~~ 497 (718)
..+ +
T Consensus 61 ---------------------------------~~~-----~-------------------------------------- 64 (343)
T 1g55_A 61 ---------------------------------LEE-----F-------------------------------------- 64 (343)
T ss_dssp ---------------------------------HHH-----H--------------------------------------
T ss_pred ---------------------------------HhH-----c--------------------------------------
Confidence 000 0
Q ss_pred cccccchhhhhhcccccccCCCCCCccEEEecCCCCccccccccCCCCCCcccchhhHHHHHHHHhhhcC--CcEEEEec
Q 047980 498 SNCGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLK--PKFVLMEN 575 (718)
Q Consensus 498 ~~~~~~i~e~~~~~~~~~l~p~~~~vDll~gGPPCQ~fS~ag~~r~~~~~~~D~rn~L~~~~~riv~~~k--Pk~~v~EN 575 (718)
. ...+|+|+||||||+||.+|+++ +.+|+|+.||.+|+++|+.++ |++|||||
T Consensus 65 -------~--------------~~~~D~l~~gpPCq~fS~ag~~~----g~~d~r~~l~~~~~~~i~~~~~~P~~~~~EN 119 (343)
T 1g55_A 65 -------D--------------RLSFDMILMSPPCQPFTRIGRQG----DMTDSRTNSFLHILDILPRLQKLPKYILLEN 119 (343)
T ss_dssp -------H--------------HHCCSEEEECCC----------------------CHHHHHHHHGGGCSSCCSEEEEEE
T ss_pred -------C--------------cCCcCEEEEcCCCcchhhcCCcC----CccCccchHHHHHHHHHHHhcCCCCEEEEeC
Confidence 0 01589999999999999999754 468899999999999999999 99999999
Q ss_pred chhhhhcccchHHHHHHHHHHhCCceEEEEEEeccccCCCCCCcEEEEEEecCCCCCCCCCCCccc
Q 047980 576 VVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHD 641 (718)
Q Consensus 576 V~gll~~~~g~~~~~i~~~L~~lGY~v~~~vLnA~dyGvPQ~R~R~fivg~r~~~~~p~~P~PtH~ 641 (718)
|+||++. ..++.+++.|.++||.+.+.+|||++|||||+|+|+||||.+.+.. ..||.|+|.
T Consensus 120 V~~l~~~---~~~~~i~~~l~~~GY~v~~~vl~a~~~GvPQ~R~R~~iv~~~~~~~-~~~p~~~~~ 181 (343)
T 1g55_A 120 VKGFEVS---STRDLLIQTIENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSEP-LPFQAPGQV 181 (343)
T ss_dssp ETTGGGS---HHHHHHHHHHHHTTEEEEEEEECGGGGTCSCCCCEEEEEEEESSSC-CTTCCTTCE
T ss_pred CccccCH---HHHHHHHHHHHHCCCeeEEEEEEHHHCCCCCcccEEEEEEEeCCCC-CCCCCCcch
Confidence 9999864 5688999999999999999999999999999999999999998864 367888875
No 10
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=100.00 E-value=3.4e-39 Score=355.38 Aligned_cols=115 Identities=20% Similarity=0.234 Sum_probs=105.6
Q ss_pred CCCccEEEecCCCCccccccccCCCCCCccc---chhhHHHHHHHHhhh--------cCCcEEEEecchhhhhcccchHH
Q 047980 520 PGDVDVICGGPPCQGVSGFNRFRNKDNPLAD---EKNKQLIVFMDIVDF--------LKPKFVLMENVVDIVKFAKGLLG 588 (718)
Q Consensus 520 ~~~vDll~gGPPCQ~fS~ag~~r~~~~~~~D---~rn~L~~~~~riv~~--------~kPk~~v~ENV~gll~~~~g~~~ 588 (718)
|+.+|||+||||||+||.+|++++ .+| +|+.||++|+|+|+. ++|++||||||+||++..+|..+
T Consensus 123 p~~vDll~ggpPCQ~fS~ag~~~g----~~d~~~~r~~L~~~~~rii~~~~~k~~~~~~Pk~~l~ENV~gl~~~~~~~~~ 198 (403)
T 4dkj_A 123 PKNIDIFTYSFPCQDLSVQGLQKG----IDKELNTRSGLLWEIERILEEIKNSFSKEEMPKYLLMENVKNLLSHKNKKNY 198 (403)
T ss_dssp CSSCSEEEECCCCTTTCTTSCCCC----CCGGGCCSGGGHHHHHHHHHHHHHHSCGGGSCSEEEEEEEGGGGSHHHHHHH
T ss_pred CCCCcEEEEeCCCCCHHHhCCCCC----CCccccccchhHHHHHHHHHHhhhhhccccCCCEEEEecchhhhhhccchHH
Confidence 567999999999999999997543 444 899999999999998 89999999999999998888899
Q ss_pred HHHHHHHHhCCceEEEEEEeccccCCCCCCcEEEEEEecCCCCCCCCCCCccc
Q 047980 589 RYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHD 641 (718)
Q Consensus 589 ~~i~~~L~~lGY~v~~~vLnA~dyGvPQ~R~R~fivg~r~~~~~p~~P~PtH~ 641 (718)
+.++..|.++||.+.+.+|||++|||||+|+|+||||++++ +.||.|+|.
T Consensus 199 ~~i~~~l~~~GY~v~~~vl~a~~~GvPQ~R~R~fiva~r~~---f~fP~~~~~ 248 (403)
T 4dkj_A 199 NTWLKQLEKFGYKSKTYLLNSKNFDNCQNRERVFCLSIRDD---YLEKTGFKF 248 (403)
T ss_dssp HHHHHHHHHTTEEEEEEEEEGGGTTCSBCCEEEEEEEEEHH---HHHHHCCCC
T ss_pred HHHHHHHHhCCCeEEEEEecHHHcCCCccceEEEEEEEcCC---CCCCCcccc
Confidence 99999999999999999999999999999999999999988 567888875
No 11
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=100.00 E-value=5.1e-38 Score=352.78 Aligned_cols=189 Identities=25% Similarity=0.383 Sum_probs=146.8
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC---CCceeecCchHHHHHHHHHHHHhhhc
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH---PETEVRNESAEDFLTLLREWEKLCIS 412 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~---p~~~v~~~~~~~~l~~lke~~~l~~~ 412 (718)
...+++|||||||||+++|| +++|++++ ||||+|+.|++||+.|| |++.+++.||.++.. ..
T Consensus 86 ~~~~~viDLFaG~GGlslG~----~~aG~~~v--~avE~d~~A~~ty~~N~~~~p~~~~~~~DI~~i~~---------~~ 150 (482)
T 3me5_A 86 HYAFRFIDLFAGIGGIRRGF----ESIGGQCV--FTSEWNKHAVRTYKANHYCDPATHHFNEDIRDITL---------SH 150 (482)
T ss_dssp CCSEEEEEESCTTSHHHHHH----HTTTEEEE--EEECCCHHHHHHHHHHSCCCTTTCEEESCTHHHHC---------TT
T ss_pred CccceEEEecCCccHHHHHH----HHCCCEEE--EEEeCCHHHHHHHHHhcccCCCcceeccchhhhhh---------cc
Confidence 46899999999999999999 78999876 99999999999999999 888899999977620 00
Q ss_pred ccccccCCccccccccCCCCCCCcCCCCCCCCCCCCCchhHHHHHHHHhHhcCCchhhhcccceeeEeeccCCCCCCCCc
Q 047980 413 FSLIARKDPQQQLYSFNDDGESEEDDDNGNVEDESEDDSEIFEVEKILKICYGDPKEIKKRGLYLKVRWRNYGPSEDTWE 492 (718)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~i~~g~p~~~~~~~l~~~~~w~~~~~~~d~w~ 492 (718)
. .+....+. .+.|..
T Consensus 151 --------~-------------------------~~~~~~~~-~~~i~~------------------------------- 165 (482)
T 3me5_A 151 --------Q-------------------------EGVSDEAA-AEHIRQ------------------------------- 165 (482)
T ss_dssp --------C-------------------------TTSCHHHH-HHHHHH-------------------------------
T ss_pred --------c-------------------------cccchhhH-Hhhhhh-------------------------------
Confidence 0 00000000 000000
Q ss_pred ccccccccccchhhhhhcccccccCCCCCCccEEEecCCCCccccccccCCC----CCCc-ccchhhHHHHHHHHhhhcC
Q 047980 493 PIEGLSNCGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNK----DNPL-ADEKNKQLIVFMDIVDFLK 567 (718)
Q Consensus 493 ~~~~~~~~~~~i~e~~~~~~~~~l~p~~~~vDll~gGPPCQ~fS~ag~~r~~----~~~~-~D~rn~L~~~~~riv~~~k 567 (718)
..+++|||+||||||+||.+|+.++. ..+. .|+|+.||++|+++|+.++
T Consensus 166 --------------------------~~~~~Dvl~gGpPCQ~FS~AG~~k~~~~g~~~G~~~D~R~~Lf~e~~riI~~~r 219 (482)
T 3me5_A 166 --------------------------HIPEHDVLLAGFPCQPFSLAGVSKKNSLGRAHGFACDTQGTLFFDVVRIIDARR 219 (482)
T ss_dssp --------------------------HSCCCSEEEEECCCCCC------------------CTTTTSHHHHHHHHHHHHC
T ss_pred --------------------------cCCCCCEEEecCCCcchhhhCcccccccccccccccCccccHHHHHHHHHHHcC
Confidence 01478999999999999999975431 1233 4899999999999999999
Q ss_pred CcEEEEecchhhhhcccchHHHHHHHHHHhCCceEE---------EEEEeccccCCCCCCcEEEEEEecCCCC
Q 047980 568 PKFVLMENVVDIVKFAKGLLGRYALARLIQMNYQVR---------MGMMAAGAYGLPQFRMRVFLWGAQPTEK 631 (718)
Q Consensus 568 Pk~~v~ENV~gll~~~~g~~~~~i~~~L~~lGY~v~---------~~vLnA~dyGvPQ~R~R~fivg~r~~~~ 631 (718)
|++||||||+||++..+|..++.|++.|.++||.+. +.+|||.+| |||+|+|+||||++++..
T Consensus 220 Pk~fvlENV~gl~s~~~g~~f~~i~~~L~~lGY~v~~~~~~g~~~~~vlnA~~~-vPQ~R~R~fivg~r~~~~ 291 (482)
T 3me5_A 220 PAMFVLENVKNLKSHDKGKTFRIIMQTLDELGYDVADAEDNGPDDPKIIDGKHF-LPQHRERIVLVGFRRDLN 291 (482)
T ss_dssp CSEEEEEEETTTTTGGGGHHHHHHHHHHHHTTEEETTTTCCSTTCTTEEEGGGT-SSBCCEEEEEEEEEGGGC
T ss_pred CcEEEEeCcHHHhcccCCcHHHHHHHHHhcCCcEEEeccccCcccceeeecccc-CCccceEEEEEEEecCcc
Confidence 999999999999998889999999999999999996 679999999 999999999999999864
No 12
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=100.00 E-value=4e-35 Score=311.04 Aligned_cols=166 Identities=22% Similarity=0.284 Sum_probs=133.7
Q ss_pred CCCccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCCCceeecCchHHHHHHHHHHHHhhhc
Q 047980 333 EPQKMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWEKLCIS 412 (718)
Q Consensus 333 ~~~~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p~~~v~~~~~~~~l~~lke~~~l~~~ 412 (718)
...+.++++|||||||||+++|| +++|++++++||+|+|+.|++||+.|||++.+.+.||.++.
T Consensus 11 ~~~~~~~~vidLFaG~GG~~~g~----~~aG~~~~~v~a~E~d~~a~~ty~~N~~~~~~~~~DI~~i~------------ 74 (295)
T 2qrv_A 11 AEKRKPIRVLSLFDGIATGLLVL----KDLGIQVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRSVT------------ 74 (295)
T ss_dssp CCCCCCEEEEEETCTTTHHHHHH----HHTTBCEEEEEEECCCHHHHHHHHHHTTTCEEEECCGGGCC------------
T ss_pred cccCCCCEEEEeCcCccHHHHHH----HHCCCccceEEEEECCHHHHHHHHHhCCCCceeCCChHHcc------------
Confidence 34567899999999999999999 78999996669999999999999999999888887775431
Q ss_pred ccccccCCccccccccCCCCCCCcCCCCCCCCCCCCCchhHHHHHHHHhHhcCCchhhhcccceeeEeeccCCCCCCCCc
Q 047980 413 FSLIARKDPQQQLYSFNDDGESEEDDDNGNVEDESEDDSEIFEVEKILKICYGDPKEIKKRGLYLKVRWRNYGPSEDTWE 492 (718)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~i~~g~p~~~~~~~l~~~~~w~~~~~~~d~w~ 492 (718)
..
T Consensus 75 --------------------------------------~~---------------------------------------- 76 (295)
T 2qrv_A 75 --------------------------------------QK---------------------------------------- 76 (295)
T ss_dssp --------------------------------------HH----------------------------------------
T ss_pred --------------------------------------HH----------------------------------------
Confidence 00
Q ss_pred ccccccccccchhhhhhcccccccCCCCCCccEEEecCCCCccccccccCCCCCCcccchhhHHHHHHHHhhhcCCc---
Q 047980 493 PIEGLSNCGEKIKEFVTHGFKSKILPLPGDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPK--- 569 (718)
Q Consensus 493 ~~~~~~~~~~~i~e~~~~~~~~~l~p~~~~vDll~gGPPCQ~fS~ag~~r~~~~~~~D~rn~L~~~~~riv~~~kPk--- 569 (718)
.+. ..+++|||+||||||+||.+|+.+ ++.+|+|+.||++|+|+|+.++|+
T Consensus 77 ----------~i~-------------~~~~~Dll~ggpPCQ~fS~ag~~r---~g~~d~r~~L~~~~~rii~~~~P~~~~ 130 (295)
T 2qrv_A 77 ----------HIQ-------------EWGPFDLVIGGSPCNDLSIVNPAR---KGLYEGTGRLFFEFYRLLHDARPKEGD 130 (295)
T ss_dssp ----------HHH-------------HTCCCSEEEECCCCGGGBTTCTTC---CTTTSTTTTHHHHHHHHHHHHSCCTTC
T ss_pred ----------Hhc-------------ccCCcCEEEecCCCccccccCccc---cccccccchhHHHHHHHHHHhCccccc
Confidence 000 014689999999999999998422 256899999999999999999999
Q ss_pred ----EEEEecchhhhhcccchHHHHHHHHHHhCCceEEEEEEeccccCCCCCCcEEEEEEecCC
Q 047980 570 ----FVLMENVVDIVKFAKGLLGRYALARLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPT 629 (718)
Q Consensus 570 ----~~v~ENV~gll~~~~g~~~~~i~~~L~~lGY~v~~~vLnA~dyGvPQ~R~R~fivg~r~~ 629 (718)
+||||||+||++..++ .+...|+ . .+.+|||.+|| ||+|+|+|| |.+++
T Consensus 131 ~~P~~~l~ENV~gl~~~~~~----~~~~~l~-~----~~~vl~a~~~~-PQ~R~R~~i-~~~~~ 183 (295)
T 2qrv_A 131 DRPFFWLFENVVAMGVSDKR----DISRFLE-S----NPVMIDAKEVS-AAHRARYFW-GNLPG 183 (295)
T ss_dssp CCCCEEEEEEESSBCHHHHH----HHHHHHT-S----CCCCEEGGGTS-SBCCEEEEE-ECCTT
T ss_pred CCccEEEEEcCcchhhcCcc----HHHHHHh-c----CcEEeecceEC-CccCcEEEE-EEecC
Confidence 9999999999987533 2333343 2 35789999996 999999998 76543
No 13
>1w4s_A Polybromo, polybromo 1 protein; BAH, bromo-associated homology domain, chromatin remodelling, PBAF, SWI/SNF-B, RSC, nuclear protein; 1.55A {Gallus gallus}
Probab=99.95 E-value=2.4e-28 Score=240.33 Aligned_cols=134 Identities=18% Similarity=0.241 Sum_probs=102.4
Q ss_pred hhhcceeeEEEECCEEEEecCCeEEEecCC-CCCCeEEEEeEEeecCCCceEEEEEEEEecccCccccccccCCCCceEe
Q 047980 172 IQAKCHYMWAEVDGHITYDLFDDAHVKAES-GEEDYICKIVEMFEAVDGTPYFTAQWYYRARDTVIESNAHLIDQRRVFF 250 (718)
Q Consensus 172 ~~~r~~Y~s~~v~G~~~y~vGD~VyV~~~~-~~p~yIgrI~~iwe~~~g~~~v~v~WFyRpeET~~~~~~~~~d~rELF~ 250 (718)
.+.|.||+++.++|. +|+|||||||.+++ +.++|||||++||++.+|+++|+|+|||||+||..+. .+.+.+||||+
T Consensus 11 ~~~r~~y~~~~~~g~-~~~vGD~V~v~~~~~~~~p~I~rI~~i~~~~~g~~~v~v~WfyRPeet~~~~-~~~~~~~EvF~ 88 (174)
T 1w4s_A 11 SLHRTYSQDCSFKNS-MYHVGDYVYVEPAEANLQPHIVCIERLWEDSAGEKWLYGCWFYRPNETFHLA-TRKFLEKEVFK 88 (174)
T ss_dssp ----------------CCCTTCEEEECCSSTTSCCEEEEEEEEEECTTCCEEEEEEEEECGGGSCCCT-TCEEETTEEEE
T ss_pred CCCcEEeEEEEECCE-EEECCCEEEEeCCCCCCCCEEEEEEEEEEcCCCCEEEEEEEecCHHHccccc-CCcCCCCeeEE
Confidence 478889999999999 99999999999987 5778999999999999999999999999999999544 44567999999
Q ss_pred eCCccccccccccceeEEEeeCCccchhhhhccCCCCc-EEEeeeeeCCCCeeeCCCccC
Q 047980 251 SEIQNDNPLECLVKKLNIARVPLNIDLEAKKLAIPHCD-YYCDMMYLLPYSTFFSLPPEN 309 (718)
Q Consensus 251 S~~~d~~~l~~I~gKC~V~~~~~~~~~~~~~~~~~~~d-fyc~~~Yd~~~~~F~~lp~e~ 309 (718)
|+++|++|+++|+|||.|++++.+...... ....++ |||++.||..+++|.+++.-.
T Consensus 89 S~~~d~~~~~~I~gkC~V~~~~~~~~~~p~--~~~~~dvF~c~~~Yd~~~~~f~~i~~w~ 146 (174)
T 1w4s_A 89 SDYYNKVPVSKILGKCVVMFVKEYFKLCPE--NFRDEDVYVCESRYSAKTKSFKKIKLWT 146 (174)
T ss_dssp EEEEEEEEGGGEEEEEEEEEHHHHTTEEET--TCCGGGEEEEEEEEETTTTEEEECSSCC
T ss_pred eCCcceecHHHeeeeEEEEECchhhhcCcC--CCCCCCEEEEeEEEccccCeEccCccCC
Confidence 999999999999999999998866543211 123334 999999999999999999753
No 14
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=99.93 E-value=4.8e-27 Score=253.44 Aligned_cols=98 Identities=18% Similarity=0.226 Sum_probs=77.6
Q ss_pred CCccEEEecCCCCccccccccCCCCCCcccchhhHHHHHHHHhhhcCCc-------EEEEecchhhhhcccchHHHHHHH
Q 047980 521 GDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPK-------FVLMENVVDIVKFAKGLLGRYALA 593 (718)
Q Consensus 521 ~~vDll~gGPPCQ~fS~ag~~r~~~~~~~D~rn~L~~~~~riv~~~kPk-------~~v~ENV~gll~~~~g~~~~~i~~ 593 (718)
+++|||+||||||+||.+| +|+.||++|+|+|++++|+ +||||||+||.+... ..+..
T Consensus 236 ~~~DlliGG~PCQ~FS~A~-----------~Rg~Lf~ef~Riv~~~rPk~~~~~P~~fv~ENV~gL~~~~~----~~i~~ 300 (386)
T 2pv0_B 236 GPFDLVYGATPPLGHTCDR-----------PPSWYLFQFHRLLQYARPKPGSPGPFFWMFVDNLVLNKEDL----DVASR 300 (386)
T ss_dssp CCCSEEEEECCCTTTCSCS-----------CTHHHHHHHHHHHHHHSCCSSCCSCCEEEEEECSCSCHHHH----HHHHH
T ss_pred CCCCEEEECCCCCcccccC-----------CcchHHHHHHHHHHHhCCCcccCCCcEEEEEechhhhhcch----HHHHH
Confidence 4689999999999999874 4789999999999999998 899999999965332 22333
Q ss_pred HHHhCCceEEEEEEeccccCCCCCCcEEEEEEecCCCCCCCCCCCccc
Q 047980 594 RLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHD 641 (718)
Q Consensus 594 ~L~~lGY~v~~~vLnA~dyGvPQ~R~R~fivg~r~~~~~p~~P~PtH~ 641 (718)
.| + +.+.||||++|||||+|+| +||.+++... .++.|||.
T Consensus 301 ~L-~----v~~~VLnA~dyGVPQrRrR--f~g~~~~~~~-~~~~p~~~ 340 (386)
T 2pv0_B 301 FL-E----MEPVTIPDVHGGSLQNAVR--VWSNIPAIRS-RHWALVSE 340 (386)
T ss_dssp HT-T----SCCCEEECCCSSSCCCEEE--EEECSSSSST-TCCTTSCH
T ss_pred HH-c----CCeEEEEccccCccccccE--EEEECCCcCC-cCCCCcCc
Confidence 33 2 4567999999999999999 5688776543 45666664
No 15
>2qrv_B DNA (cytosine-5)-methyltransferase 3-like; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=99.93 E-value=8.7e-27 Score=236.50 Aligned_cols=98 Identities=18% Similarity=0.194 Sum_probs=71.6
Q ss_pred CCccEEEecCCCCccccccccCCCCCCcccchhhHHHHHHHHhhhcCCc-------EEEEecchhhhhcccchHHHHHHH
Q 047980 521 GDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFMDIVDFLKPK-------FVLMENVVDIVKFAKGLLGRYALA 593 (718)
Q Consensus 521 ~~vDll~gGPPCQ~fS~ag~~r~~~~~~~D~rn~L~~~~~riv~~~kPk-------~~v~ENV~gll~~~~g~~~~~i~~ 593 (718)
+++|||+||||||+||.+| +|+.||.+|+|+|++++|+ +||||||+||++... ..+..
T Consensus 80 ~~~DlliGG~PCQ~FS~ag-----------~rg~Lf~ef~Riv~~~rPk~~~~~P~~fv~ENV~gL~~~~~----~~i~~ 144 (230)
T 2qrv_B 80 GPFDLVYGATPPLGHTCDR-----------PPSWYLFQFHRLLQYARPKPGSPRPFFWMFVDNLVLNKEDL----DVASR 144 (230)
T ss_dssp CCCSEEEEECCCTTTSSCS-----------CTHHHHHHHHHHHHHHCCCSSCCSCCEEEEEECSCSCHHHH----HHHHH
T ss_pred CCCCEEEECCCCCcccccC-----------CCchHHHHHHHHHHHHCcCcccCCCcEEEEeccHHhhhccH----HHHHH
Confidence 4689999999999999876 3789999999999999999 899999999987543 23333
Q ss_pred HHHhCCceEEEEEEeccccCCCCCCcEEEEEEecCCCCCCCCCCCccc
Q 047980 594 RLIQMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTEKLPPYALPTHD 641 (718)
Q Consensus 594 ~L~~lGY~v~~~vLnA~dyGvPQ~R~R~fivg~r~~~~~p~~P~PtH~ 641 (718)
.| +. .+.+|||.+||+||+| |+| ||..++... .+..|+|.
T Consensus 145 ~l-~~----~~~vLnA~dfgvpQrR-r~f-~g~~~~~~~-~~~~p~~~ 184 (230)
T 2qrv_B 145 FL-EM----EPVTIPDVHGGSLQNA-VRV-WSNIPAIRS-RHWALVSE 184 (230)
T ss_dssp HH-TS----CCEECCCCCSCC-----CEE-EECSTTSST-TCCSCSCH
T ss_pred HH-cC----CcEEEEcccCCcCccc-EEE-EeecCCCCc-cccCCcCh
Confidence 33 34 3568999999999999 444 487776532 34455654
No 16
>4dov_A ORC1, origin recognition complex subunit 1; DNA replication, replication; 1.70A {Mus musculus} PDB: 4dow_A*
Probab=99.82 E-value=9.1e-20 Score=174.24 Aligned_cols=130 Identities=14% Similarity=0.260 Sum_probs=103.4
Q ss_pred cceeeEEEE--CC--EEEEecCCeEEEecCCCCCCeEEEEeEEeec---CCCceEEEEEEEEecccCcccc---ccccCC
Q 047980 175 KCHYMWAEV--DG--HITYDLFDDAHVKAESGEEDYICKIVEMFEA---VDGTPYFTAQWYYRARDTVIES---NAHLID 244 (718)
Q Consensus 175 r~~Y~s~~v--~G--~~~y~vGD~VyV~~~~~~p~yIgrI~~iwe~---~~g~~~v~v~WFyRpeET~~~~---~~~~~d 244 (718)
-.+|+++.+ .| ..+++|||||+|++.+++.||||+|+.|+++ ....+.++||||+||+|++.+. .+...+
T Consensus 21 ~~~Y~~~~v~~~~~~~~~i~vGd~VLI~~~D~~~PyVAki~~lye~~~e~~~~k~A~VQWy~R~~EiP~~k~~l~g~~~~ 100 (163)
T 4dov_A 21 QQMYREICMKINDGSEIHIKVGQFVLIQGEDNKKPYVAKLIELFQNGAEVPPKKCARVQWFVRFLEIPVSKRHLLGRSPP 100 (163)
T ss_dssp EEEESEEEEECTTSCEEEEETTCEEEECCSSSSCCEEEEEEEEEEETTSSSCEEEEEEEEEEEGGGSCTTTGGGGCSCCC
T ss_pred ceeeeEEEEecCCCCCeEEeeCCEEEEeCCcccCChhHHHHHHHhccccCCCceEEEEEeeechhhccccchhhccCCCC
Confidence 368888888 56 3499999999999999766799999999996 3356889999999999998554 334467
Q ss_pred CCceEeeCCcc---ccccccccceeEEEeeCCccchhhhhccCCCCcEEEeeeeeCCCCeeeCCCcc
Q 047980 245 QRRVFFSEIQN---DNPLECLVKKLNIARVPLNIDLEAKKLAIPHCDYYCDMMYLLPYSTFFSLPPE 308 (718)
Q Consensus 245 ~rELF~S~~~d---~~~l~~I~gKC~V~~~~~~~~~~~~~~~~~~~dfyc~~~Yd~~~~~F~~lp~e 308 (718)
.+|||+++|.+ ++++++|.|||+|+.+.++..++ ......+-|| .+++++.++|+.|+++
T Consensus 101 ~qEIF~~d~~~~d~~I~aeTIi~~c~V~~~~~~e~~p---~~~~~e~t~F-vklsWd~k~f~pl~~~ 163 (163)
T 4dov_A 101 AQEIFWYDCSDWDNKINVETIIGPVQVVALAPEEVIP---VDQKSEETLF-VKLSWNKKDFAPLPPE 163 (163)
T ss_dssp TTEEEEECCSCSCCEEEGGGEEEEEEEEECCTTCCCC---SSCCCCSEEE-EEEEECSSCEEECC--
T ss_pred CCeEEEecCCCCcccccHHHeeeceEEEEcCCccccC---CCcccceEEE-EEEEecCCcceeCCCC
Confidence 89999999984 88999999999999998777653 2233444555 6778889999999864
No 17
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=99.81 E-value=1.1e-19 Score=218.51 Aligned_cols=138 Identities=14% Similarity=0.121 Sum_probs=117.1
Q ss_pred hcceeeEEEECCEEEEecCCeEEEecCC------------------------------------------CCCCeEEEEe
Q 047980 174 AKCHYMWAEVDGHITYDLFDDAHVKAES------------------------------------------GEEDYICKIV 211 (718)
Q Consensus 174 ~r~~Y~s~~v~G~~~y~vGD~VyV~~~~------------------------------------------~~p~yIgrI~ 211 (718)
++.+|.++.++|+ .|+|||||||.++. ++|++||||+
T Consensus 321 ~~~~~~~~~~~g~-~y~vgD~Vyl~p~~~~f~~~~~~~~~~~~~~~vd~~~ype~yrk~~~~~kg~n~~~~~P~~IgrI~ 399 (1002)
T 3swr_A 321 SRVLYYSATKNGI-LYRVGDGVYLPPEAFTFNIKLSSPVKRPRKEPVDEDLYPEHYRKYSDYIKGSNLDAPEPYRIGRIK 399 (1002)
T ss_dssp SCEEESEEEETTE-EEETTCEEEECTTSCCCSSCCCCCCCCSCSCCCCTTTCTTSGGGHHHHHTCCCCCCCCCCEEEEEE
T ss_pred CcEEEEEEEECCE-EEecCCEEEECCcccccccccccccccccccccccccchhhhhccchhccccccCCCCCceeeEEe
Confidence 4669999999999 99999999999922 3488999999
Q ss_pred EEeecCCCc-------eEEEEEEEEecccCcc-ccccccCCCCceEeeCCccccccccccceeEEEeeCCccchhhhhcc
Q 047980 212 EMFEAVDGT-------PYFTAQWYYRARDTVI-ESNAHLIDQRRVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLA 283 (718)
Q Consensus 212 ~iwe~~~g~-------~~v~v~WFyRpeET~~-~~~~~~~d~rELF~S~~~d~~~l~~I~gKC~V~~~~~~~~~~~~~~~ 283 (718)
+||.+..+. .+|+|+|||||+||.. ....+..|.||||+|++.+++|+++|.|||.|++.............
T Consensus 400 ~i~~~~~~~~~~~~~~~~v~v~~fyRPed~~~~~~~~~~~D~~elf~S~~~~~~~~~~i~GkC~V~~~~d~~~~~~~~~~ 479 (1002)
T 3swr_A 400 EIFCPKKSNGRPNETDIKIRVNKFYRPENTHKSTPASYHADINLLYWSDEEAVVDFKAVQGRCTVEYGEDLPECVQVYSM 479 (1002)
T ss_dssp EEEECCCSSSSCCSSCCEEEEEECBCGGGSTTCGGGGSSSCTTEEEECCCEEEEEGGGCCEEEEEEEGGGCSSCHHHHHH
T ss_pred EEEecCCccccCCCccEEEEEEEEECcccccccccccccCCcceEEEecceeccCHHHcceEEEEEEeccccccchhhcc
Confidence 999877665 8999999999999973 33456679999999999999999999999999998866654333444
Q ss_pred CCCCcEEEeeeeeCCCCeeeCCCccCccc
Q 047980 284 IPHCDYYCDMMYLLPYSTFFSLPPENKRV 312 (718)
Q Consensus 284 ~~~~dfyc~~~Yd~~~~~F~~lp~e~~~~ 312 (718)
.++++|||...||+.+++|+++|.+++..
T Consensus 480 ~~p~~fyf~~~Yd~~~~~f~~~p~~~~~~ 508 (1002)
T 3swr_A 480 GGPNRFYFLEAYNAKSKSFEDPPNHARSP 508 (1002)
T ss_dssp TSSSEEEEEEEEETTTTEEECCCSTTSCC
T ss_pred CCCCeEEEEEEEeCCCCeeecCccccccc
Confidence 55689999999999999999999988753
No 18
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=99.75 E-value=3e-18 Score=210.36 Aligned_cols=136 Identities=13% Similarity=0.075 Sum_probs=113.8
Q ss_pred hcceeeEEEECCEEEEecCCeEEEecCC------------------------------------------CCCCeEEEEe
Q 047980 174 AKCHYMWAEVDGHITYDLFDDAHVKAES------------------------------------------GEEDYICKIV 211 (718)
Q Consensus 174 ~r~~Y~s~~v~G~~~y~vGD~VyV~~~~------------------------------------------~~p~yIgrI~ 211 (718)
++.+|.++.++|+ .|+|||||||.++. +.|++||||.
T Consensus 633 ~~~~Y~~~~~~g~-~Y~vgD~Vyl~p~~f~~~~~~~~~~~~~~~~~~~~~~ype~yrk~~~~~kg~~~~~~~Py~IgqI~ 711 (1330)
T 3av4_A 633 GRVYCSSITKNGV-VYRLGDSVYLPPEAFTFNIKVASPVKRPKKDPVNETLYPEHYRKYSDYIKGSNLDAPEPYRIGRIK 711 (1330)
T ss_dssp SSEEEEEEEETTE-EEETTCEEEECTTSCCCCCCC-------CCCCCCTTTCSSGGGGGC-------CCCCCCCEEEEEE
T ss_pred CceeeeEEEECCE-EEecCCEEEECcccccccccccccccccccccccccccchhhhcccccccccccCCCCCceEEEEE
Confidence 4788999999998 99999999997751 4678999999
Q ss_pred EEeecCC------CceEEEEEEEEecccCcccc-ccccCCCCceEeeCCccccccccccceeEEEeeCCccchhhhhccC
Q 047980 212 EMFEAVD------GTPYFTAQWYYRARDTVIES-NAHLIDQRRVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLAI 284 (718)
Q Consensus 212 ~iwe~~~------g~~~v~v~WFyRpeET~~~~-~~~~~d~rELF~S~~~d~~~l~~I~gKC~V~~~~~~~~~~~~~~~~ 284 (718)
+||.+.+ +..+|+|+|||||+||..+. ....+|.||||+|++.+++|+++|.|||.|++..............
T Consensus 712 eI~~~~~s~~~~~~~~~vrV~wFyRPedt~~~~~~~~~~D~nELf~S~~~~~vp~~~I~GKC~V~~~~d~~~~i~~y~~~ 791 (1330)
T 3av4_A 712 EIHCGKKKGKVNEADIKLRLYKFYRPENTHRSYNGSYHTDINMLYWSDEEAVVNFSDVQGRCTVEYGEDLLESIQDYSQG 791 (1330)
T ss_dssp ECCCCEETTEECSSCCEEEEEEEECTTTSTTGGGTTTTSCTTBCEEEEEEEEEEGGGCCEEEEEEESTTCSSCHHHHHHT
T ss_pred EEEecCCccccCCCceEEEEEEeeChhhcccccccccccCcceEEeeccceecCHHHcCceEEEEecccccccccccccC
Confidence 9998765 57899999999999998443 2346799999999999999999999999999988665532122333
Q ss_pred CCCcEEEeeeeeCCCCeeeCCCccCc
Q 047980 285 PHCDYYCDMMYLLPYSTFFSLPPENK 310 (718)
Q Consensus 285 ~~~dfyc~~~Yd~~~~~F~~lp~e~~ 310 (718)
+.++|||++.|+..+++|+.+|...+
T Consensus 792 g~d~Fy~~~~Yd~~~k~~~~~P~~~~ 817 (1330)
T 3av4_A 792 GPDRFYFLEAYNSKTKNFEDPPNHAR 817 (1330)
T ss_dssp STTEEEESCEEETTTTEEECCCGGGC
T ss_pred CCCeEEEEEEecccCCeeccCchHhh
Confidence 46789999999999999998888765
No 19
>2fl7_A Regulatory protein SIR3; ORC, silencing, chromatin, transcription; 1.85A {Saccharomyces cerevisiae} PDB: 2fvu_A 3tu4_K*
Probab=98.86 E-value=4.6e-09 Score=106.15 Aligned_cols=120 Identities=11% Similarity=0.052 Sum_probs=88.0
Q ss_pred CCEEEEecCCeEEEecCCCCCCeEEEEeEEeecC-CCceEEEEEEEEecccCccc------ccc--------cc------
Q 047980 184 DGHITYDLFDDAHVKAESGEEDYICKIVEMFEAV-DGTPYFTAQWYYRARDTVIE------SNA--------HL------ 242 (718)
Q Consensus 184 ~G~~~y~vGD~VyV~~~~~~p~yIgrI~~iwe~~-~g~~~v~v~WFyRpeET~~~------~~~--------~~------ 242 (718)
||. .|++||+|.|..++.+-+.++-|.+|--.. +.-..+.|.||+|..|+... ... ..
T Consensus 49 Dg~-~~~~GDsVlv~~~~~~sysv~LI~eIrl~t~~n~vei~v~wylR~~Ei~~~~~~~~~~P~~~~~~~~~~~~~~~~~ 127 (232)
T 2fl7_A 49 DGL-SFGKGESVIFNDNVTETYSVYLIHEIRLNTLNNVVEIWVFSYLRWFELKPKLYYEQFRPDLIKEDHPLEFYKDKFF 127 (232)
T ss_dssp TCC-EECTTCEEEEEETTTTEEEEEEEEEEEC-----CCEEEEEEEECGGGSCHHHHHHHHCHHHHHTTCCHHHHHHHHH
T ss_pred CCc-EEeCCCEEEEecCCCCceEEEEEEEEEecCCCceEEEEEEEeecHHHcCchhhhhhcCchhcccccchhhhhhhhh
Confidence 688 999999999998765554555555554333 44677899999999998631 112 22
Q ss_pred --CCCCceEeeCCccccccccccceeEEEeeCCccchhhhhccCCCCcEEEeeeeeCCCCeeeCCC
Q 047980 243 --IDQRRVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLAIPHCDYYCDMMYLLPYSTFFSLP 306 (718)
Q Consensus 243 --~d~rELF~S~~~d~~~l~~I~gKC~V~~~~~~~~~~~~~~~~~~~dfyc~~~Yd~~~~~F~~lp 306 (718)
...+|||+|.+.+.+-+.+|+++|+|+.-..+.++-. .......|||+..+++....|..+.
T Consensus 128 ~~~~~nELflTa~l~eI~l~diI~~anVls~~Ef~~l~~--d~~~~~tFf~R~~cd~~~~~f~~iD 191 (232)
T 2fl7_A 128 NEVNKSELYLTAELSEIWLKDFIAVGQILPESQWNDSSI--DKIEDRDFLVRYACEPTAEKFVPID 191 (232)
T ss_dssp HHSCTTEEEEEEEEEEECGGGEEEECEEECTTTC---------CTTTEEEEEEECCTTSCSCEECC
T ss_pred cccccceEEEeccHHHHHHHhhhhheEeccHHHHHHhcc--cccCCceEEEEEEEcCCcCcccccc
Confidence 5899999999999999999999999999887776532 1344678999999999888888554
No 20
>1m4z_A Origin recognition complex subunit 1; DNA replication, transcriptional silencing, chromatin, BAH D gene regulation; 2.20A {Saccharomyces cerevisiae} SCOP: b.34.12.1 PDB: 1zhi_A 1zbx_A
Probab=98.86 E-value=4.1e-09 Score=106.89 Aligned_cols=121 Identities=12% Similarity=0.064 Sum_probs=92.6
Q ss_pred CCEEEEecCCeEEEecCCCCCCeEEEEeEEeecC-CCceEEEEEEEEecccCccc------ccc--------cc------
Q 047980 184 DGHITYDLFDDAHVKAESGEEDYICKIVEMFEAV-DGTPYFTAQWYYRARDTVIE------SNA--------HL------ 242 (718)
Q Consensus 184 ~G~~~y~vGD~VyV~~~~~~p~yIgrI~~iwe~~-~g~~~v~v~WFyRpeET~~~------~~~--------~~------ 242 (718)
||. .|++||+|.|..++.+-+.++-|.+|--.. +.-..+.|.||+|..|+... ... ..
T Consensus 49 Dg~-~~~~GDsVlv~~~~~~sysv~LI~eIrl~t~~n~vei~v~wylR~~Ei~~~~~~~~~~P~~~~~~~~~~~~~~~~~ 127 (238)
T 1m4z_A 49 DGI-KLGRGDSVVMHNEAAGTYSVYMIQELRLNTLNNVVELWALTYLRWFEVNPLAHYRQFNPDANILNRPLNYYNKLFS 127 (238)
T ss_dssp TCC-EECTTCEEEEEETTTTEEEEEEEEEEEEETTTTEEEEEEEEEECGGGSCHHHHHHHHCHHHHHSCCCHHHHHHHHH
T ss_pred CCc-EEeCCCEEEEecCCCCceEEEEEEEEEecCCCceEEEEEEEeecHHHcCchhhhhhcCchhcccccchhhhhhhhh
Confidence 788 999999999998765554555555554443 45677899999999999631 112 22
Q ss_pred --CCCCceEeeCCccccccccccceeEEEeeCCccchhhhhccCCCCcEEEeeeeeCCCCeeeCCCc
Q 047980 243 --IDQRRVFFSEIQNDNPLECLVKKLNIARVPLNIDLEAKKLAIPHCDYYCDMMYLLPYSTFFSLPP 307 (718)
Q Consensus 243 --~d~rELF~S~~~d~~~l~~I~gKC~V~~~~~~~~~~~~~~~~~~~dfyc~~~Yd~~~~~F~~lp~ 307 (718)
...+|||+|.+.+.+-+.+|+++|+|+.-..+.++.. .......|||+..+++....|..+.=
T Consensus 128 ~~~~~nELflTa~l~eI~l~diI~~anVls~~Ef~~i~~--d~~~~~tFf~R~~cd~~~~~f~~iD~ 192 (238)
T 1m4z_A 128 ETANKNELYLTAELAELQLFNFIRVANVMDGSKWEVLKG--NVDPERDFTVRYICEPTGEKFVDINI 192 (238)
T ss_dssp HHSCTTEEEEEEEEEEECGGGEEEEEEEECHHHHHHHGG--GCCTTTEEEEEEECCTTSCCCEECCH
T ss_pred cccccceEEEeccHHHHhHHhhhhheEeccHHHHhhhcc--ccccCceEEEEEEEcCCcCccccccH
Confidence 5899999999999999999999999999776665432 22556789999999998888885543
No 21
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=98.65 E-value=2e-07 Score=100.11 Aligned_cols=97 Identities=18% Similarity=0.096 Sum_probs=61.8
Q ss_pred CCccEEEecCCCCccccccccCCCCCCcccchhhHHHHHH-HHhhhcCCcE-EEEecchhhhhcccchHHHHHHHHHHhC
Q 047980 521 GDVDVICGGPPCQGVSGFNRFRNKDNPLADEKNKQLIVFM-DIVDFLKPKF-VLMENVVDIVKFAKGLLGRYALARLIQM 598 (718)
Q Consensus 521 ~~vDll~gGPPCQ~fS~ag~~r~~~~~~~D~rn~L~~~~~-riv~~~kPk~-~v~ENV~gll~~~~g~~~~~i~~~L~~l 598 (718)
..+|+|+..|||.+.+..+. ..+... .+..++ .+.+.++|.- |++++....... ...+.+.+...+.+.
T Consensus 224 ~~fD~Ii~dPP~~~~~~~~~-------~~~~~~-~~~~ll~~~~~~LkpgG~lli~~~~~~~~~-~~~~~~~l~~a~~~~ 294 (332)
T 2igt_A 224 STYDIILTDPPKFGRGTHGE-------VWQLFD-HLPLMLDICREILSPKALGLVLTAYSIRAS-FYSMHELMRETMRGA 294 (332)
T ss_dssp CCBSEEEECCCSEEECTTCC-------EEEHHH-HHHHHHHHHHHTBCTTCCEEEEEECCTTSC-HHHHHHHHHHHTTTS
T ss_pred CCceEEEECCccccCCchHH-------HHHHHH-HHHHHHHHHHHhcCcCcEEEEEECCCCCCC-HHHHHHHHHHHHHHc
Confidence 36899999999987663221 011111 122333 3446678864 477876654321 122233333456688
Q ss_pred CceEEEEEEeccccCCCCC-CcEEEEEEe
Q 047980 599 NYQVRMGMMAAGAYGLPQF-RMRVFLWGA 626 (718)
Q Consensus 599 GY~v~~~vLnA~dyGvPQ~-R~R~fivg~ 626 (718)
||.+....+....+++||. +.|++.+|+
T Consensus 295 g~~v~~~e~~~p~~~~~q~~~~r~lp~g~ 323 (332)
T 2igt_A 295 GGVVASGELVIREAGLDGKTPGRVLSTSL 323 (332)
T ss_dssp CSEEEEEEEEEECCCSSSCCCCCEEEEEE
T ss_pred CCeEEEEEEecccCCcccccCCceeeeEE
Confidence 9999988888999999999 999988775
No 22
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.02 E-value=3.2e-05 Score=84.45 Aligned_cols=56 Identities=18% Similarity=0.230 Sum_probs=41.2
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCC-------CceeecCchHH
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHP-------ETEVRNESAED 398 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p-------~~~v~~~~~~~ 398 (718)
...+|||||||+|++++.+ ...|..-+ .+||+++.|++..+.|.. +..++..|+.+
T Consensus 220 ~~~~VLDl~cG~G~~sl~l----a~~g~~~V--~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~ 282 (396)
T 3c0k_A 220 ENKRVLNCFSYTGGFAVSA----LMGGCSQV--VSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFK 282 (396)
T ss_dssp TTCEEEEESCTTCSHHHHH----HHTTCSEE--EEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHH
T ss_pred CCCeEEEeeccCCHHHHHH----HHCCCCEE--EEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHH
Confidence 4568999999999999888 44565334 699999999999888842 34455555544
No 23
>2rso_A Chromatin-associated protein SWI6; chromodomain, silencing, chromosomal protein, Met transcription; NMR {Schizosaccharomyces pombe}
Probab=97.58 E-value=5.6e-06 Score=72.71 Aligned_cols=57 Identities=28% Similarity=0.608 Sum_probs=45.1
Q ss_pred CchhHHHHHHHHhHhcCCchhhhcccceeeEeeccCC-CCCCCCcccccccccccchhhhhh
Q 047980 449 DDSEIFEVEKILKICYGDPKEIKKRGLYLKVRWRNYG-PSEDTWEPIEGLSNCGEKIKEFVT 509 (718)
Q Consensus 449 ~~~~~~~v~~l~~i~~g~p~~~~~~~l~~~~~w~~~~-~~~d~w~~~~~~~~~~~~i~e~~~ 509 (718)
...++|+|++|++..+.. .+..+.+.|.|+||+ +.++||+|..+|.+|++.|.+|-.
T Consensus 26 ~~~eey~VE~Il~~r~~~----~~g~~~YlVkWkGy~~~~~~TWEP~~nl~~c~~li~~f~~ 83 (92)
T 2rso_A 26 EEEDEYVVEKVLKHRMAR----KGGGYEYLLKWEGYDDPSDNTWSSEADCSGCKQLIEAYWN 83 (92)
T ss_dssp CCCCCCCEEEEEEEEECT----TSSCEEEEEEETTCCCCTTSEEECGGGGGTSHHHHHHHHH
T ss_pred CcCceEEEEEEEEEEeec----CCCEEEEEEEEccCCCcccCccccHHHHhhHHHHHHHHHH
Confidence 345579999999864311 124588999999998 578899999999999999999854
No 24
>2rsn_A Chromo domain-containing protein 1; chromodomain, protein-peptide complex, RNA-mediated gene SIL chromosomal protein, methylation; HET: M3L; NMR {Schizosaccharomyces pombe}
Probab=97.54 E-value=3.9e-06 Score=70.98 Aligned_cols=54 Identities=28% Similarity=0.509 Sum_probs=43.3
Q ss_pred chhHHHHHHHHhHhcCCchhhhcccceeeEeeccCCCCCCCCcccccccccccchhhhh
Q 047980 450 DSEIFEVEKILKICYGDPKEIKKRGLYLKVRWRNYGPSEDTWEPIEGLSNCGEKIKEFV 508 (718)
Q Consensus 450 ~~~~~~v~~l~~i~~g~p~~~~~~~l~~~~~w~~~~~~~d~w~~~~~~~~~~~~i~e~~ 508 (718)
+.++|+|++|++.... .+..+.+.|.|+||+.+++||+|..+|.+|...|.+|-
T Consensus 18 ~~e~yeVE~Il~~r~~-----~~g~~~YlVkWkGy~~~~~TWEp~~nl~~~~~li~~f~ 71 (75)
T 2rsn_A 18 DADVYEVEDILADRVN-----KNGINEYYIKWAGYDWYDNTWEPEQNLFGAEKVLKKWK 71 (75)
T ss_dssp GGGCEEEEEEEEEEEC-----SSSCEEEEEEEESSCGGGCEEEEGGGGTTTHHHHHHHH
T ss_pred CCceEEEEEEEEEEEc-----CCCcEEEEEEECCCCCcCCeeecHHHccChHHHHHHHH
Confidence 3567899999875321 12347788999999999999999999999999998883
No 25
>1g6z_A CLR4 protein; transferase; NMR {Schizosaccharomyces pombe} SCOP: b.34.13.2
Probab=97.49 E-value=6.1e-06 Score=68.82 Aligned_cols=57 Identities=32% Similarity=0.624 Sum_probs=45.4
Q ss_pred HHHHHHHHhHhcCCchhhhcccce-eeEeeccCCCCCCCCcccccccccccchhhhhhccccc
Q 047980 453 IFEVEKILKICYGDPKEIKKRGLY-LKVRWRNYGPSEDTWEPIEGLSNCGEKIKEFVTHGFKS 514 (718)
Q Consensus 453 ~~~v~~l~~i~~g~p~~~~~~~l~-~~~~w~~~~~~~d~w~~~~~~~~~~~~i~e~~~~~~~~ 514 (718)
+|+|++|++..... ...+. +.|.|+||..+++||+|..+|.+|++.|.+|.....++
T Consensus 8 ey~VE~Il~~r~~~-----~g~~~~YlVKWkGy~~~~~TWEp~enL~~~~~li~~f~~~~~~~ 65 (70)
T 1g6z_A 8 EYEVERIVDEKLDR-----NGAVKLYRIRWLNYSSRSDTWEPPENLSGCSAVLAEWKRRKRRL 65 (70)
T ss_dssp SSCCCSCSEEECCT-----TSSCCEEEECCTTTTSSCCEEECGGGGSSCHHHHHHHHHHHTTT
T ss_pred eEEEEEEEEEEEcC-----CCcEEEEEEEECCCCCCCCceecHHHHhhhHHHHHHHHHhcccc
Confidence 47788888764421 13466 89999999999999999999999999999997655443
No 26
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=97.46 E-value=0.00069 Score=66.04 Aligned_cols=45 Identities=29% Similarity=0.293 Sum_probs=36.5
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCC
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHP 387 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p 387 (718)
...++||++||.|+++..+ ...|..-+ .+||+++.+++..+.|..
T Consensus 49 ~~~~vlD~g~G~G~~~~~l----~~~~~~~v--~~vD~~~~~~~~a~~~~~ 93 (207)
T 1wy7_A 49 EGKVVADLGAGTGVLSYGA----LLLGAKEV--ICVEVDKEAVDVLIENLG 93 (207)
T ss_dssp TTCEEEEETCTTCHHHHHH----HHTTCSEE--EEEESCHHHHHHHHHHTG
T ss_pred CcCEEEEeeCCCCHHHHHH----HHcCCCEE--EEEECCHHHHHHHHHHHH
Confidence 4568999999999999888 44565433 599999999999998864
No 27
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=97.39 E-value=0.0024 Score=60.62 Aligned_cols=52 Identities=21% Similarity=0.251 Sum_probs=41.7
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCCCceeecC
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNE 394 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p~~~v~~~ 394 (718)
....++||+-||.|.++.-| ...|.++ .++|+++.+++..+.|.++..+...
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l----~~~~~~v---~~~D~~~~~~~~a~~~~~~~~~~~~ 96 (195)
T 3cgg_A 45 PRGAKILDAGCGQGRIGGYL----SKQGHDV---LGTDLDPILIDYAKQDFPEARWVVG 96 (195)
T ss_dssp CTTCEEEEETCTTTHHHHHH----HHTTCEE---EEEESCHHHHHHHHHHCTTSEEEEC
T ss_pred cCCCeEEEECCCCCHHHHHH----HHCCCcE---EEEcCCHHHHHHHHHhCCCCcEEEc
Confidence 35668999999999998887 4457765 4999999999999999877665543
No 28
>4hae_A CDY-like 2, chromodomain Y-like protein 2; protein binding, structural genomics consortiu; 2.00A {Homo sapiens}
Probab=97.34 E-value=5.2e-06 Score=71.25 Aligned_cols=51 Identities=43% Similarity=0.824 Sum_probs=41.9
Q ss_pred hHHHHHHHHhHhcCCchhhhcccceeeEeeccCCCCCCCCcccccccccccchhhh
Q 047980 452 EIFEVEKILKICYGDPKEIKKRGLYLKVRWRNYGPSEDTWEPIEGLSNCGEKIKEF 507 (718)
Q Consensus 452 ~~~~v~~l~~i~~g~p~~~~~~~l~~~~~w~~~~~~~d~w~~~~~~~~~~~~i~e~ 507 (718)
++|+|++|++.... .+..+.+.|.|+||+++++||+|..+|.+|++.|.+|
T Consensus 22 e~yeVE~Ild~R~~-----~~g~~~YlVKWkGy~~~~~TWEp~~nl~~~~~li~~f 72 (81)
T 4hae_A 22 DLYEVERIVDKRKN-----KKGKWEYLIRWKGYGSTEDTWEPEHHLLHCEEFIDEF 72 (81)
T ss_dssp CEEEEEEEEEEEEC-----TTSCEEEEEEETTCCGGGCEEEEGGGEEECCCCCCTT
T ss_pred CEEEEEEEEEeEEC-----CCCeEEEEEEECCCCCCCCeEEeHHHhhhhHHHHHHH
Confidence 46889999875321 2234788999999999999999999999999999888
No 29
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=97.22 E-value=0.00089 Score=69.42 Aligned_cols=44 Identities=25% Similarity=0.380 Sum_probs=35.5
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH 386 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~ 386 (718)
...++||+|||.|+++.-+ ...|..-+ .|||+++.|++..+.|.
T Consensus 125 ~~~~VLDlgcG~G~~~~~l----a~~~~~~V--~~vD~s~~~~~~a~~n~ 168 (278)
T 2frn_A 125 PDELVVDMFAGIGHLSLPI----AVYGKAKV--IAIEKDPYTFKFLVENI 168 (278)
T ss_dssp TTCEEEETTCTTTTTHHHH----HHHTCCEE--EEECCCHHHHHHHHHHH
T ss_pred CCCEEEEecccCCHHHHHH----HHhCCCEE--EEEECCHHHHHHHHHHH
Confidence 3568999999999999888 44565423 69999999999988873
No 30
>3lwe_A M-phase phosphoprotein 8; MPP8, structural genomics, structural genomics consortium, S repeat, nucleus, cell cycle; 2.05A {Homo sapiens} SCOP: b.34.13.0 PDB: 3r93_A* 3svm_A* 3qo2_A*
Probab=97.20 E-value=6.3e-06 Score=67.12 Aligned_cols=51 Identities=43% Similarity=0.802 Sum_probs=42.0
Q ss_pred HHHHHHHHhHhcCCchhhhcccceeeEeeccCCCCCCCCcccccccccccchhhhhh
Q 047980 453 IFEVEKILKICYGDPKEIKKRGLYLKVRWRNYGPSEDTWEPIEGLSNCGEKIKEFVT 509 (718)
Q Consensus 453 ~~~v~~l~~i~~g~p~~~~~~~l~~~~~w~~~~~~~d~w~~~~~~~~~~~~i~e~~~ 509 (718)
+|+|++|++... .+..+.+.|.|+||+++++||+|..+|.+|++.|.+|-.
T Consensus 4 ~y~VE~Il~~r~------~~g~~~YlVkWkGy~~~~~TWEp~~nl~~~~~li~~f~~ 54 (62)
T 3lwe_A 4 VFEVEKILDMKT------EGGKVLYKVRWKGYTSDDDTWEPEIHLEDCKEVLLEFRK 54 (62)
T ss_dssp SCCEEEEEEEEE------ETTEEEEEEEETTSCGGGCEEEEHHHHTTCHHHHHHHHH
T ss_pred eEEEEEEEEEEE------cCCeEEEEEEEeCCCCcCCCeeeHhHhhccHHHHHHHHH
Confidence 356777776532 345688999999999999999999999999999998854
No 31
>3fdt_A Chromobox protein homolog 5; chromobox homolog5, CBX5, structural GENO structural genomics consortium, SGC, centromere, nucleus, phosphoprotein; HET: M3L; 2.00A {Homo sapiens}
Probab=97.13 E-value=9e-06 Score=65.54 Aligned_cols=50 Identities=32% Similarity=0.664 Sum_probs=40.3
Q ss_pred HHHHHHHHhHhcCCchhhhcccceeeEeeccCCCCCCCCcccccccccccchhhhhh
Q 047980 453 IFEVEKILKICYGDPKEIKKRGLYLKVRWRNYGPSEDTWEPIEGLSNCGEKIKEFVT 509 (718)
Q Consensus 453 ~~~v~~l~~i~~g~p~~~~~~~l~~~~~w~~~~~~~d~w~~~~~~~~~~~~i~e~~~ 509 (718)
+|+|++|++... .+..+.+.|.|+||+.+++||+|..+| +|++.|.+|..
T Consensus 3 ey~VE~Il~~r~------~~g~~~YlVkWkGy~~~~~TWEp~~nl-~~~~li~~f~~ 52 (59)
T 3fdt_A 3 EYVVEKVLDRRV------VKGQVEYLLKWKGFSEEHNTWEPEKNL-DCPELISEFMK 52 (59)
T ss_dssp EEEEEEEEEEEE------ETTEEEEEEEETTSCGGGCEEEEGGGE-ECHHHHHHHHC
T ss_pred eEEEEEEEEEEE------eCCeEEEEEEEeCCCcccCCccchhHC-CCHHHHHHHHH
Confidence 456667766532 245688999999999999999999999 79999999854
No 32
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=97.08 E-value=0.0019 Score=66.74 Aligned_cols=57 Identities=25% Similarity=0.239 Sum_probs=40.5
Q ss_pred cccceeccccccchhhHhHhhhhhhcC-CeeEeEEeecccHHHHHHHHhhC-----CCceeecCchHH
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAG-LNLVTRWAVDINEYACQSLKLNH-----PETEVRNESAED 398 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG-~~~~~~~avd~~~~A~~t~~~N~-----p~~~v~~~~~~~ 398 (718)
...+|||++||.||.++-|.. ...| ..+ +|+|+++.+++..+.|. ++..+++.|+.+
T Consensus 83 ~g~~VLDlgaG~G~~t~~la~--~~~~~~~v---~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~ 145 (274)
T 3ajd_A 83 EDDFILDMCAAPGGKTTHLAQ--LMKNKGTI---VAVEISKTRTKALKSNINRMGVLNTIIINADMRK 145 (274)
T ss_dssp TTCEEEETTCTTCHHHHHHHH--HTTTCSEE---EEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHH
T ss_pred CcCEEEEeCCCccHHHHHHHH--HcCCCCEE---EEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHh
Confidence 456899999999999988842 1133 344 59999999999888873 345555555543
No 33
>3f2u_A Chromobox protein homolog 1; human chromobox homolog 1, CBX1, structural genomics, struct genomics consortium, SGC, centromere, nucleus; 1.80A {Homo sapiens} PDB: 3tzd_A* 2l11_A* 3dm1_A*
Probab=97.07 E-value=1.5e-05 Score=63.37 Aligned_cols=49 Identities=33% Similarity=0.745 Sum_probs=38.7
Q ss_pred HHHHHHHhHhcCCchhhhcccceeeEeeccCCCCCCCCcccccccccccchhhhhh
Q 047980 454 FEVEKILKICYGDPKEIKKRGLYLKVRWRNYGPSEDTWEPIEGLSNCGEKIKEFVT 509 (718)
Q Consensus 454 ~~v~~l~~i~~g~p~~~~~~~l~~~~~w~~~~~~~d~w~~~~~~~~~~~~i~e~~~ 509 (718)
|+|++|++.. ..+..+.+.|.|+||+.+++||+|..+| +|++.|.+|..
T Consensus 3 y~VE~Il~~r------~~~g~~~YlVkWkGy~~~~~TWEp~~nl-~~~~li~~f~~ 51 (55)
T 3f2u_A 3 YVVEKVLDRR------VVKGKVEYLLKWKGFSDEDNTWEPEENL-DCPDLIAEFLQ 51 (55)
T ss_dssp CCEEEEEEEE------EETTEEEEEEEETTSCGGGCEEEEGGGC-CCHHHHHHHHC
T ss_pred EEEEEEEEEE------EeCCeEEEEEEEEeCCCccCCeeEHHHC-CCHHHHHHHHH
Confidence 4556666542 2345688999999999999999999999 79999988844
No 34
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=97.06 E-value=0.0031 Score=68.67 Aligned_cols=57 Identities=16% Similarity=0.161 Sum_probs=41.2
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC-----C--CceeecCchHHH
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH-----P--ETEVRNESAEDF 399 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~-----p--~~~v~~~~~~~~ 399 (718)
...+|||||||.|+++.-+ ...|..-+ .+||+++.|++..+.|. . +..+++.|+.++
T Consensus 212 ~~~~VLDl~cGtG~~sl~l----a~~ga~~V--~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~ 275 (385)
T 2b78_A 212 AGKTVLNLFSYTAAFSVAA----AMGGAMAT--TSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDY 275 (385)
T ss_dssp BTCEEEEETCTTTHHHHHH----HHTTBSEE--EEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHH
T ss_pred CCCeEEEEeeccCHHHHHH----HHCCCCEE--EEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHH
Confidence 3458999999999999877 34465434 59999999998888774 1 445556555443
No 35
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=97.03 E-value=0.0028 Score=63.30 Aligned_cols=43 Identities=21% Similarity=0.335 Sum_probs=36.1
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH 386 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~ 386 (718)
...+|||++||.|+++..| ...|.++ .+||+++.+++..+.|.
T Consensus 78 ~~~~vLD~gcG~G~~~~~l----a~~~~~v---~~vD~s~~~~~~a~~~~ 120 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQF----ALTGMRV---IAIDIDPVKIALARNNA 120 (241)
T ss_dssp CCSEEEETTCTTSHHHHHH----HHTTCEE---EEEESCHHHHHHHHHHH
T ss_pred CCCEEEECccccCHHHHHH----HHcCCEE---EEEECCHHHHHHHHHHH
Confidence 4678999999999999988 4567555 59999999999888874
No 36
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=97.00 E-value=0.0095 Score=55.92 Aligned_cols=43 Identities=23% Similarity=0.253 Sum_probs=34.7
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH 386 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~ 386 (718)
...++||+.||.|.++.-|. ..+.++ .++|+++.+++..+.|.
T Consensus 35 ~~~~vLdiG~G~G~~~~~l~----~~~~~v---~~vD~~~~~~~~a~~~~ 77 (183)
T 2yxd_A 35 KDDVVVDVGCGSGGMTVEIA----KRCKFV---YAIDYLDGAIEVTKQNL 77 (183)
T ss_dssp TTCEEEEESCCCSHHHHHHH----TTSSEE---EEEECSHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCCHHHHHHH----hcCCeE---EEEeCCHHHHHHHHHHH
Confidence 45689999999999998883 345555 49999999998888774
No 37
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=96.98 E-value=0.0043 Score=67.46 Aligned_cols=44 Identities=23% Similarity=0.314 Sum_probs=35.3
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH 386 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~ 386 (718)
...+|||||||.|+++.-+ ...|..-+ .+||+++.|++..+.|.
T Consensus 217 ~~~~VLDl~~G~G~~~~~l----a~~g~~~v--~~vD~s~~~l~~a~~n~ 260 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHA----AIAGADEV--IGIDKSPRAIETAKENA 260 (396)
T ss_dssp TTCEEEETTCTTTHHHHHH----HHTTCSEE--EEEESCHHHHHHHHHHH
T ss_pred CCCeEEEecCCCCHHHHHH----HHCCCCEE--EEEeCCHHHHHHHHHHH
Confidence 4568999999999999888 33465333 59999999999888875
No 38
>1ap0_A Modifier protein 1; chromatin-binding, protein interaction motif, alpha+beta; NMR {Mus musculus} SCOP: b.34.13.2 PDB: 1guw_A*
Probab=96.97 E-value=4.3e-05 Score=64.18 Aligned_cols=51 Identities=33% Similarity=0.694 Sum_probs=42.2
Q ss_pred hHHHHHHHHhHhcCCchhhhcccceeeEeeccCCCCCCCCcccccccccccchhhhhh
Q 047980 452 EIFEVEKILKICYGDPKEIKKRGLYLKVRWRNYGPSEDTWEPIEGLSNCGEKIKEFVT 509 (718)
Q Consensus 452 ~~~~v~~l~~i~~g~p~~~~~~~l~~~~~w~~~~~~~d~w~~~~~~~~~~~~i~e~~~ 509 (718)
++|+|++|++... .+..+.+.|.|+||..+++||+|..+| +|++.|.+|..
T Consensus 12 ~ey~VE~Il~~r~------~~g~~~YlVKWkGy~~~~~TWEp~~nL-~~~~li~~f~~ 62 (73)
T 1ap0_A 12 EEYVVEKVLDRRV------VKGKVEYLLKWKGFSDEDNTWEPEENL-DCPDLIAEFLQ 62 (73)
T ss_dssp SCCEEEEEEEEEE------CSSSEEEEEEEESSSSCCCEEEETTTC-CCHHHHHHHTT
T ss_pred ceEEEEEEEEEEE------eCCeEEEEEEECCCCCccCcEeeHHHC-CCHHHHHHHHH
Confidence 3577888887643 245688999999999999999999999 69999998854
No 39
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=96.93 E-value=0.0035 Score=60.79 Aligned_cols=51 Identities=25% Similarity=0.236 Sum_probs=40.1
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCCCceeec
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRN 393 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p~~~v~~ 393 (718)
...++||++||.|.++..+ ...|..-+ .+||+++.+++..+.|.++..+++
T Consensus 51 ~~~~vlD~gcG~G~~~~~l----~~~~~~~v--~~vD~~~~~~~~a~~~~~~~~~~~ 101 (200)
T 1ne2_A 51 GGRSVIDAGTGNGILACGS----YLLGAESV--TAFDIDPDAIETAKRNCGGVNFMV 101 (200)
T ss_dssp BTSEEEEETCTTCHHHHHH----HHTTBSEE--EEEESCHHHHHHHHHHCTTSEEEE
T ss_pred CCCEEEEEeCCccHHHHHH----HHcCCCEE--EEEECCHHHHHHHHHhcCCCEEEE
Confidence 4568999999999999888 34466433 599999999999999987544443
No 40
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=96.92 E-value=0.0066 Score=61.75 Aligned_cols=44 Identities=25% Similarity=0.195 Sum_probs=34.3
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH 386 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~ 386 (718)
...+||||.||+|+++.-+ ...+..- +.+||+++.+++..+.|.
T Consensus 49 ~~~~vLDlG~G~G~~~~~l----a~~~~~~--v~gvDi~~~~~~~a~~n~ 92 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLL----STRTKAK--IVGVEIQERLADMAKRSV 92 (259)
T ss_dssp SCCEEEETTCTTTHHHHHH----HTTCCCE--EEEECCSHHHHHHHHHHH
T ss_pred CCCEEEEcCCchhHHHHHH----HHhcCCc--EEEEECCHHHHHHHHHHH
Confidence 4668999999999998877 3334322 269999999999888874
No 41
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=96.88 E-value=0.0048 Score=67.55 Aligned_cols=42 Identities=26% Similarity=0.254 Sum_probs=35.4
Q ss_pred ccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC
Q 047980 338 DVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH 386 (718)
Q Consensus 338 ~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~ 386 (718)
..+|||||||.|++++-+ ...|.. + .|||+++.|++..+.|.
T Consensus 215 g~~VLDlg~GtG~~sl~~----a~~ga~-V--~avDis~~al~~a~~n~ 256 (393)
T 4dmg_A 215 GERVLDVYSYVGGFALRA----ARKGAY-A--LAVDKDLEALGVLDQAA 256 (393)
T ss_dssp TCEEEEESCTTTHHHHHH----HHTTCE-E--EEEESCHHHHHHHHHHH
T ss_pred CCeEEEcccchhHHHHHH----HHcCCe-E--EEEECCHHHHHHHHHHH
Confidence 568999999999999887 446777 4 59999999999888774
No 42
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=96.87 E-value=0.009 Score=64.74 Aligned_cols=56 Identities=25% Similarity=0.230 Sum_probs=40.5
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC-----CCceeecCchHHH
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH-----PETEVRNESAEDF 399 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~-----p~~~v~~~~~~~~ 399 (718)
...+|||||||.|+++.-+. ..+.++ .+||+++.|++..+.|. .+..+++.|+.++
T Consensus 209 ~~~~VLDlg~G~G~~~~~la----~~~~~v---~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~ 269 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLA----LGFREV---VAVDSSAEALRRAEENARLNGLGNVRVLEANAFDL 269 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHH----HHEEEE---EEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHH
T ss_pred CCCeEEEeeeccCHHHHHHH----HhCCEE---EEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHH
Confidence 45689999999999998883 223333 59999999998888873 3355666655443
No 43
>2dnt_A Chromodomain protein, Y chromosome-like, isoform B; histone H3 tail, choromatin organization modifier, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.34.13.2
Probab=96.84 E-value=5.1e-05 Score=64.52 Aligned_cols=55 Identities=40% Similarity=0.729 Sum_probs=43.7
Q ss_pred hHHHHHHHHhHhcCCchhhhcccceeeEeeccCCCCCCCCcccccccccccchhhhhhcc
Q 047980 452 EIFEVEKILKICYGDPKEIKKRGLYLKVRWRNYGPSEDTWEPIEGLSNCGEKIKEFVTHG 511 (718)
Q Consensus 452 ~~~~v~~l~~i~~g~p~~~~~~~l~~~~~w~~~~~~~d~w~~~~~~~~~~~~i~e~~~~~ 511 (718)
++|+|++|++.... .+..+.+.|.|+||..+++||+|..+|.+|++.|.+|....
T Consensus 12 ~~y~VE~Il~~r~~-----~~g~~~YlVKWkGy~~~~~TWEp~~~l~~~~~li~~f~~~~ 66 (78)
T 2dnt_A 12 ELYEVERIVDKRKN-----KKGKTEYLVRWKGYDSEDDTWEPEQHLVNCEEYIHDFNRRH 66 (78)
T ss_dssp CSCCCCCEEEEEEC-----TTSCEEEEECBTTBCGGGCEEEETTTCTTCHHHHHHHHHHH
T ss_pred ceEEEEEEEEEEEc-----CCCcEEEEEEECCCCccCCceecHHHHHhHHHHHHHHHhhh
Confidence 35678888875321 12358899999999999999999999999999999996543
No 44
>1q3l_A Heterochromatin protein 1; chromodomain, HP1, chromatin, methyllysine, monomethyllysine, structural protein; HET: MLZ; 1.64A {Drosophila melanogaster} SCOP: b.34.13.2 PDB: 1kne_A* 1kna_A*
Probab=96.82 E-value=2.7e-05 Score=64.70 Aligned_cols=51 Identities=31% Similarity=0.692 Sum_probs=41.3
Q ss_pred hHHHHHHHHhHhcCCchhhhcccceeeEeeccCCCCCCCCcccccccccccchhhhhh
Q 047980 452 EIFEVEKILKICYGDPKEIKKRGLYLKVRWRNYGPSEDTWEPIEGLSNCGEKIKEFVT 509 (718)
Q Consensus 452 ~~~~v~~l~~i~~g~p~~~~~~~l~~~~~w~~~~~~~d~w~~~~~~~~~~~~i~e~~~ 509 (718)
++|+|++|++... .+..+.+.|.|+||..+++||+|..+| +|++.|.+|..
T Consensus 15 ~ey~VEkIld~R~------~~g~~eYlVKWkGy~~~~~TWEp~enL-~c~~lI~~F~~ 65 (69)
T 1q3l_A 15 EEYAVEKIIDRRV------RKGMVEYYLKWKGYPETENTWEPENNL-DCQDLIQQYEA 65 (69)
T ss_dssp -CEEEEEEEEEEE------ETTEEEEEEEETTSCGGGCEEEEGGGE-ECHHHHHHHHH
T ss_pred CcEEEEEEEEEEE------ECCeEEEEEEEcCCCcccCCccchHHC-CCHHHHHHHHH
Confidence 3467888887633 345688999999999999999999999 79998888844
No 45
>3g7l_A Chromo domain-containing protein 1; chromodomain, protein-peptide complex, silencing, cell cycle, chromosome partition, DNA-binding, nucleus; HET: M3L; 2.20A {Schizosaccharomyces pombe}
Probab=96.78 E-value=3.5e-05 Score=62.45 Aligned_cols=51 Identities=31% Similarity=0.571 Sum_probs=39.6
Q ss_pred hHHHHHHHHhHhcCCchhhhcccc-eeeEeeccCCCCCCCCcccccccccccchhhhhh
Q 047980 452 EIFEVEKILKICYGDPKEIKKRGL-YLKVRWRNYGPSEDTWEPIEGLSNCGEKIKEFVT 509 (718)
Q Consensus 452 ~~~~v~~l~~i~~g~p~~~~~~~l-~~~~~w~~~~~~~d~w~~~~~~~~~~~~i~e~~~ 509 (718)
++|+|++|++... .+.++ .+.|.|+||+.+++||+|..+|. |+..|.+|..
T Consensus 6 ~ey~VE~Il~~r~------~~g~~~~YlVkWkGy~~~~~TWEp~~nl~-~~~li~~~~~ 57 (61)
T 3g7l_A 6 DVYEVEDILADRV------NKNGINEYYIKWAGYDWYDNTWEPEQNLF-GAEKVLKKWK 57 (61)
T ss_dssp CEEEEEEEEEEEE------CTTSCEEEEEEETTSCGGGCEEEEGGGGT-BCHHHHHHHH
T ss_pred cEEEEEEEEEEEE------ECCCEEEEEEEEeCCCCcCCceeeHhHCC-CHHHHHHHHH
Confidence 3577888887643 23445 88999999999999999999995 8887777643
No 46
>2dnv_A Chromobox protein homolog 8; chromo domain, histone H3 tail, choromatin organization modifier, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.34.13.2
Probab=96.77 E-value=7.8e-05 Score=60.98 Aligned_cols=50 Identities=26% Similarity=0.563 Sum_probs=40.0
Q ss_pred hHHHHHHHHhHhcCCchhhhcccceeeEeeccCCCCCCCCcccccccccccchhhhh
Q 047980 452 EIFEVEKILKICYGDPKEIKKRGLYLKVRWRNYGPSEDTWEPIEGLSNCGEKIKEFV 508 (718)
Q Consensus 452 ~~~~v~~l~~i~~g~p~~~~~~~l~~~~~w~~~~~~~d~w~~~~~~~~~~~~i~e~~ 508 (718)
++|+|++|++... .+..+.+.|.|+||.++++||+|..+|..| +.|.+|.
T Consensus 9 ~ey~VE~Il~~r~------~~g~~~YlVKWkGy~~~~~TWEp~~~l~~~-~li~~f~ 58 (64)
T 2dnv_A 9 RVFAAEALLKRRI------RKGRMEYLVKWKGWSQKYSTWEPEENILDA-RLLAAFE 58 (64)
T ss_dssp CCCCCCCEEEEEE------SSSSEEEEECCSSCCCSSCCEEETTTCCCH-HHHHHHH
T ss_pred ceEEEEEEEEEEE------eCCcEEEEEEECCCCcccCCccCHhHCCCH-HHHHHHH
Confidence 3577888887633 345688999999999999999999999875 6777773
No 47
>2k1b_A Chromobox protein homolog 7; alpha/beta protein, chromatin regulator, nucleus, repressor, transcription, transcription regulation; NMR {Homo sapiens} PDB: 2l12_A* 2l1b_A*
Probab=96.75 E-value=5e-05 Score=63.83 Aligned_cols=51 Identities=27% Similarity=0.505 Sum_probs=40.6
Q ss_pred hHHHHHHHHhHhcCCchhhhcccceeeEeeccCCCCCCCCcccccccccccchhhhhh
Q 047980 452 EIFEVEKILKICYGDPKEIKKRGLYLKVRWRNYGPSEDTWEPIEGLSNCGEKIKEFVT 509 (718)
Q Consensus 452 ~~~~v~~l~~i~~g~p~~~~~~~l~~~~~w~~~~~~~d~w~~~~~~~~~~~~i~e~~~ 509 (718)
++|+|++|++... .+..+.+.|.|+||.++++||+|..+|. |++.|.+|..
T Consensus 20 ~eyeVEkIld~r~------~~g~~~YlVKWkGy~~~~~TWEp~enL~-~~~li~~F~~ 70 (73)
T 2k1b_A 20 QVFAVESIRKKRV------RKGKVEYLVKWKGWPPKYSTWEPEEHIL-DPRLVMAYEE 70 (73)
T ss_dssp CCCCCSEEEEEEE------ETTEEEEEEECTTCCGGGCCEEETTSCS-CHHHHHHHHT
T ss_pred ceEEEEEEEEEEE------cCCcEEEEEEECCCCcccCeecchHHCC-CHHHHHHHHH
Confidence 3577888887633 3456889999999999999999999987 5777887743
No 48
>1pdq_A Polycomb protein; methyllysine, chromodomain, polycomb, lysine methylation, trimethyllysine, cation-PI, chromo, structural protein; HET: M3L; 1.76A {Drosophila melanogaster} SCOP: b.34.13.2
Probab=96.71 E-value=4.3e-05 Score=64.04 Aligned_cols=50 Identities=24% Similarity=0.465 Sum_probs=40.8
Q ss_pred hHHHHHHHHhHhcCCchhhhcccceeeEeeccCCCCCCCCcccccccccccchhhhh
Q 047980 452 EIFEVEKILKICYGDPKEIKKRGLYLKVRWRNYGPSEDTWEPIEGLSNCGEKIKEFV 508 (718)
Q Consensus 452 ~~~~v~~l~~i~~g~p~~~~~~~l~~~~~w~~~~~~~d~w~~~~~~~~~~~~i~e~~ 508 (718)
++|+|++|++... .+..+.+.|.|+||..+++||+|..+|. |++.|.+|.
T Consensus 19 ~eyeVEkIld~r~------~~g~~~YlVKWkGy~~~~nTWEP~enL~-~~~lI~~F~ 68 (72)
T 1pdq_A 19 LVYAAEKIIQKRV------KKGVVEYRVKWKGWNQRYNTWEPEVNIL-DRRLIDIYE 68 (72)
T ss_dssp EEEEEEEEEEEEE------ETTEEEEEEEETTSCGGGCEEEEGGGCC-STHHHHHHC
T ss_pred ceEEEEEEEEEEE------eCCcEEEEEEECCCCCccCeecchHHCC-CHHHHHHHH
Confidence 4578889987632 3456889999999999999999999996 788888773
No 49
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=96.56 E-value=0.028 Score=55.39 Aligned_cols=44 Identities=14% Similarity=0.050 Sum_probs=35.1
Q ss_pred ccccceeccccc-cchhhHhHhhhhhhc-CCeeEeEEeecccHHHHHHHHhhC
Q 047980 336 KMDVKLLDLYSG-CGAMSTGLCLGANLA-GLNLVTRWAVDINEYACQSLKLNH 386 (718)
Q Consensus 336 ~~~~~~lDLFsG-~Gg~s~Gl~~g~~~a-G~~~~~~~avd~~~~A~~t~~~N~ 386 (718)
+...+|||+.|| .|.++.-+. .. +.++ .++|+++.+++..+.|.
T Consensus 54 ~~~~~vLDlG~G~~G~~~~~la----~~~~~~v---~~vD~s~~~~~~a~~~~ 99 (230)
T 3evz_A 54 RGGEVALEIGTGHTAMMALMAE----KFFNCKV---TATEVDEEFFEYARRNI 99 (230)
T ss_dssp CSSCEEEEECCTTTCHHHHHHH----HHHCCEE---EEEECCHHHHHHHHHHH
T ss_pred CCCCEEEEcCCCHHHHHHHHHH----HhcCCEE---EEEECCHHHHHHHHHHH
Confidence 345789999999 999988773 33 5555 59999999998888774
No 50
>2d9u_A Chromobox protein homolog 2 (isoform 2); chromobox homolog 2, chromo domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.29 E-value=0.00022 Score=60.06 Aligned_cols=54 Identities=26% Similarity=0.533 Sum_probs=42.4
Q ss_pred hHHHHHHHHhHhcCCchhhhcccceeeEeeccCCCCCCCCcccccccccccchhhhhhccc
Q 047980 452 EIFEVEKILKICYGDPKEIKKRGLYLKVRWRNYGPSEDTWEPIEGLSNCGEKIKEFVTHGF 512 (718)
Q Consensus 452 ~~~~v~~l~~i~~g~p~~~~~~~l~~~~~w~~~~~~~d~w~~~~~~~~~~~~i~e~~~~~~ 512 (718)
++|+|++|++... .+..+.+.|.|+||...++||+|..+|.+ +..|.+|.....
T Consensus 9 ~ey~VE~Il~~r~------~~g~~~YlVKWkGy~~~~~TWEp~~nl~~-~~li~~f~~~~~ 62 (74)
T 2d9u_A 9 QVFAAECILSKRL------RKGKLEYLVKWRGWSSKHNSWEPEENILD-PRLLLAFQKKEH 62 (74)
T ss_dssp CCCCEEEEEEEEE------ETTEEEEEEEETTSCTTTCEEEEGGGCCC-HHHHHHHHHHHH
T ss_pred ccEEEEEEEEEEE------eCCcEEEEEEECCCCCccCccccHHHCCC-HHHHHHHHHhhh
Confidence 3577888887633 34568899999999999999999999986 477888866443
No 51
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=96.27 E-value=0.023 Score=62.68 Aligned_cols=43 Identities=19% Similarity=0.233 Sum_probs=34.6
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH 386 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~ 386 (718)
...++||||||.|.++.-| ...+.++ .|||+++.|.+..+.|.
T Consensus 286 ~~~~VLDlgcG~G~~~~~l----a~~~~~V---~gvD~s~~al~~A~~n~ 328 (433)
T 1uwv_A 286 PEDRVLDLFCGMGNFTLPL----ATQAASV---VGVEGVPALVEKGQQNA 328 (433)
T ss_dssp TTCEEEEESCTTTTTHHHH----HTTSSEE---EEEESCHHHHHHHHHHH
T ss_pred CCCEEEECCCCCCHHHHHH----HhhCCEE---EEEeCCHHHHHHHHHHH
Confidence 3458999999999999888 3345554 59999999999888774
No 52
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=96.19 E-value=0.079 Score=50.25 Aligned_cols=36 Identities=25% Similarity=0.271 Sum_probs=30.1
Q ss_pred ccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHH
Q 047980 338 DVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQS 381 (718)
Q Consensus 338 ~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t 381 (718)
..++||+.||.|.++.-| ...| ++ .|||+++.+++.
T Consensus 24 ~~~vLD~GcG~G~~~~~l----~~~~-~v---~gvD~s~~~~~~ 59 (170)
T 3q87_B 24 MKIVLDLGTSTGVITEQL----RKRN-TV---VSTDLNIRALES 59 (170)
T ss_dssp SCEEEEETCTTCHHHHHH----TTTS-EE---EEEESCHHHHHT
T ss_pred CCeEEEeccCccHHHHHH----HhcC-cE---EEEECCHHHHhc
Confidence 448999999999999888 5566 44 599999999887
No 53
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=96.03 E-value=0.0073 Score=59.18 Aligned_cols=57 Identities=23% Similarity=0.254 Sum_probs=44.4
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC-----CCceeecCchHHH
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH-----PETEVRNESAEDF 399 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~-----p~~~v~~~~~~~~ 399 (718)
...+||||+||.|.++..+ ...|..-+ .+||+++.+++..+.|. ++..+++.|+.++
T Consensus 54 ~~~~vLDlgcG~G~~~~~l----~~~~~~~V--~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~ 115 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEA----LSRYAAGA--TLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSF 115 (202)
T ss_dssp TTCEEEETTCTTCHHHHHH----HHTTCSEE--EEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHH
T ss_pred CCCeEEEeCCCcCHHHHHH----HhcCCCEE--EEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHH
Confidence 3568999999999999875 34455333 59999999999988876 4677888888765
No 54
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=95.99 E-value=0.086 Score=55.96 Aligned_cols=49 Identities=20% Similarity=0.257 Sum_probs=35.2
Q ss_pred ccccceeccccccchhhHhHhhhhhhc-CCeeEeEEeecccHHHHHHHHhh
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLA-GLNLVTRWAVDINEYACQSLKLN 385 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~a-G~~~~~~~avd~~~~A~~t~~~N 385 (718)
....+|||++||.|++...+..-+... |.. ...+++|+++.+++..+.|
T Consensus 129 ~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~-~~v~GiDi~~~~~~~a~~n 178 (344)
T 2f8l_A 129 KKNVSILDPACGTANLLTTVINQLELKGDVD-VHASGVDVDDLLISLALVG 178 (344)
T ss_dssp CSEEEEEETTCTTSHHHHHHHHHHHTTSSCE-EEEEEEESCHHHHHHHHHH
T ss_pred CCCCEEEeCCCCccHHHHHHHHHHHHhcCCC-ceEEEEECCHHHHHHHHHH
Confidence 356799999999999998874322111 111 2247999999999988887
No 55
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=95.96 E-value=0.041 Score=56.70 Aligned_cols=44 Identities=20% Similarity=0.297 Sum_probs=34.1
Q ss_pred cccceeccccccchhhHhHhhhhhhc-CCeeEeEEeecccHHHHHHHHhhC
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLA-GLNLVTRWAVDINEYACQSLKLNH 386 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~a-G~~~~~~~avd~~~~A~~t~~~N~ 386 (718)
...++||||||.|+++.-+. +.. +.++ .|||+++.|++..+.|.
T Consensus 119 ~~~~VLDlgcG~G~~s~~la---~~~~~~~V---~~vD~s~~av~~a~~n~ 163 (272)
T 3a27_A 119 ENEVVVDMFAGIGYFTIPLA---KYSKPKLV---YAIEKNPTAYHYLCENI 163 (272)
T ss_dssp TTCEEEETTCTTTTTHHHHH---HHTCCSEE---EEEECCHHHHHHHHHHH
T ss_pred CCCEEEEecCcCCHHHHHHH---HhCCCCEE---EEEeCCHHHHHHHHHHH
Confidence 44589999999999998873 222 2243 59999999999888874
No 56
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=95.96 E-value=0.036 Score=52.64 Aligned_cols=43 Identities=19% Similarity=0.134 Sum_probs=35.1
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH 386 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~ 386 (718)
...+|||+.||.|.++.-| ...|.++ .|||+++.+.+..+.|.
T Consensus 22 ~~~~vLDiGcG~G~~~~~l----a~~~~~v---~~vD~s~~~l~~a~~~~ 64 (185)
T 3mti_A 22 DESIVVDATMGNGNDTAFL----AGLSKKV---YAFDVQEQALGKTSQRL 64 (185)
T ss_dssp TTCEEEESCCTTSHHHHHH----HTTSSEE---EEEESCHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCHHHHHH----HHhCCEE---EEEECCHHHHHHHHHHH
Confidence 4568999999999999888 3346665 49999999998887774
No 57
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=95.90 E-value=0.11 Score=51.13 Aligned_cols=44 Identities=25% Similarity=0.300 Sum_probs=35.5
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCC
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHP 387 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p 387 (718)
...++||+-||.|.++.-| ...|.++ .++|+++.+++..+.+.+
T Consensus 37 ~~~~vLdiG~G~G~~~~~l----~~~~~~~---~~~D~s~~~~~~a~~~~~ 80 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENL----CPKFKNT---WAVDLSQEMLSEAENKFR 80 (246)
T ss_dssp CTTEEEEETCTTSTTHHHH----GGGSSEE---EEECSCHHHHHHHHHHHH
T ss_pred CCCeEEEeCCCCCHHHHHH----HHCCCcE---EEEECCHHHHHHHHHHHh
Confidence 4568999999999998887 4457765 499999999888777643
No 58
>2kvm_A Chromobox protein homolog 7; histone modification, lysine methylation, chromobox, polycom chromatin-binding; HET: MLY; NMR {Mus musculus}
Probab=95.90 E-value=0.00028 Score=59.31 Aligned_cols=50 Identities=28% Similarity=0.503 Sum_probs=39.8
Q ss_pred HHHHHHHHhHhcCCchhhhcccceeeEeeccCCCCCCCCcccccccccccchhhhhh
Q 047980 453 IFEVEKILKICYGDPKEIKKRGLYLKVRWRNYGPSEDTWEPIEGLSNCGEKIKEFVT 509 (718)
Q Consensus 453 ~~~v~~l~~i~~g~p~~~~~~~l~~~~~w~~~~~~~d~w~~~~~~~~~~~~i~e~~~ 509 (718)
+|+|++|++... .+..+.+.|.|+||.++++||+|..+|. |++.|.+|..
T Consensus 13 ~y~VE~Il~~r~------~~g~~~YlVKWkGy~~~~~TWEp~~~L~-~~~li~~f~~ 62 (74)
T 2kvm_A 13 VFAVESIRKKRV------RKGKVEYLVKWKGWPPKYSTWEPEEHIL-DPRLVMAYEE 62 (74)
T ss_dssp CCCEEEEEEEEE------ETTEEEEEEEETTSCGGGCEEEETTTCS-CHHHHHHHHH
T ss_pred cEEEEEEEEEEE------eCCcEEEEEEEcCCCCccCeEeeHHHCC-CHHHHHHHHH
Confidence 467888887532 3456889999999999999999999987 4677887754
No 59
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=95.89 E-value=0.017 Score=67.87 Aligned_cols=44 Identities=20% Similarity=0.217 Sum_probs=35.4
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH 386 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~ 386 (718)
...+|||||||.|++++.+ ...|..-+ .+||+++.|++..+.|.
T Consensus 539 ~g~~VLDlg~GtG~~sl~a----a~~ga~~V--~aVD~s~~al~~a~~N~ 582 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHA----GLGGARST--TTVDMSRTYLEWAERNL 582 (703)
T ss_dssp TTCEEEEESCTTCHHHHHH----HHTTCSEE--EEEESCHHHHHHHHHHH
T ss_pred CCCcEEEeeechhHHHHHH----HHCCCCEE--EEEeCCHHHHHHHHHHH
Confidence 3458999999999998876 34566544 59999999999888884
No 60
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=95.89 E-value=0.0089 Score=58.54 Aligned_cols=57 Identities=25% Similarity=0.306 Sum_probs=43.7
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC-------CCceeecCchHHH
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH-------PETEVRNESAEDF 399 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~-------p~~~v~~~~~~~~ 399 (718)
...+||||+||.|+++..+ ...|..-+ .+||+++.+++..+.|. ++..+++.|+.++
T Consensus 53 ~~~~vLDlGcGtG~~~~~~----~~~~~~~v--~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~ 116 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEA----LSRQAKKV--TFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDF 116 (201)
T ss_dssp TTCEEEETTCTTCHHHHHH----HHTTCSEE--EEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHH
T ss_pred CCCeEEEcCCccCHHHHHH----HHccCCEE--EEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHH
Confidence 3468999999999998875 33455333 59999999999888875 4667788887664
No 61
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=95.87 E-value=0.0096 Score=57.24 Aligned_cols=58 Identities=21% Similarity=0.318 Sum_probs=45.4
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC-----CCceeecCchHHHH
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH-----PETEVRNESAEDFL 400 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~-----p~~~v~~~~~~~~l 400 (718)
...++|||+||.|.++..+ ...|..-+ .+||+++.+++..+.|. ++..+++.|+.+++
T Consensus 44 ~~~~vLDlgcG~G~~~~~~----~~~~~~~v--~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~ 106 (189)
T 3p9n_A 44 TGLAVLDLYAGSGALGLEA----LSRGAASV--LFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVV 106 (189)
T ss_dssp TTCEEEEETCTTCHHHHHH----HHTTCSEE--EEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHH
T ss_pred CCCEEEEeCCCcCHHHHHH----HHCCCCeE--EEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHH
Confidence 4568999999999998876 33565433 59999999999888875 46788888887763
No 62
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=95.86 E-value=0.016 Score=64.74 Aligned_cols=46 Identities=28% Similarity=0.145 Sum_probs=35.1
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhh
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLN 385 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N 385 (718)
+...+||||+||.||.++-|..-+... ..| .|+|+++.+++..+.|
T Consensus 104 ~~g~~VLDlcaGpGgkt~~lA~~~~~~-g~V---~AvDis~~rl~~~~~n 149 (456)
T 3m4x_A 104 KPGEKVLDLCAAPGGKSTQLAAQMKGK-GLL---VTNEIFPKRAKILSEN 149 (456)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTTC-SEE---EEECSSHHHHHHHHHH
T ss_pred CCCCEEEEECCCcCHHHHHHHHHcCCC-CEE---EEEeCCHHHHHHHHHH
Confidence 446689999999999998884322122 234 5999999999998887
No 63
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=95.83 E-value=0.043 Score=61.37 Aligned_cols=47 Identities=26% Similarity=0.232 Sum_probs=35.6
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH 386 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~ 386 (718)
....+||||+||.||.++-|..-+...| .| .|||+++.+++..+.|.
T Consensus 100 ~~g~~VLDlgaGpG~kt~~LA~~~~~~g-~V---~AvDis~~~l~~a~~n~ 146 (464)
T 3m6w_A 100 KPGERVLDLAAAPGGKTTHLAARMGGKG-LL---LANEVDGKRVRGLLENV 146 (464)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHTTTCS-EE---EEECSCHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCC-EE---EEEECCHHHHHHHHHHH
Confidence 4567899999999999998843222223 33 59999999999988883
No 64
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=95.70 E-value=0.0065 Score=63.50 Aligned_cols=43 Identities=26% Similarity=0.406 Sum_probs=34.1
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhh
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLN 385 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N 385 (718)
..-+|||+|||.|++++-+ ...|-.-+ +|||+|+.|.+.++.|
T Consensus 125 ~g~~VlD~~aG~G~~~i~~----a~~g~~~V--~avD~np~a~~~~~~N 167 (278)
T 3k6r_A 125 PDELVVDMFAGIGHLSLPI----AVYGKAKV--IAIEKDPYTFKFLVEN 167 (278)
T ss_dssp TTCEEEETTCTTTTTTHHH----HHHTCCEE--EEECCCHHHHHHHHHH
T ss_pred CCCEEEEecCcCcHHHHHH----HHhcCCeE--EEEECCHHHHHHHHHH
Confidence 4568999999999998766 23443223 6999999999999988
No 65
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=95.65 E-value=0.018 Score=63.56 Aligned_cols=43 Identities=35% Similarity=0.507 Sum_probs=34.8
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH 386 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~ 386 (718)
...++||||||.|.++.-| ...|.++ .+||+++.|++..+.|.
T Consensus 290 ~~~~VLDlgcG~G~~sl~l----a~~~~~V---~gvD~s~~ai~~A~~n~ 332 (425)
T 2jjq_A 290 EGEKILDMYSGVGTFGIYL----AKRGFNV---KGFDSNEFAIEMARRNV 332 (425)
T ss_dssp CSSEEEEETCTTTHHHHHH----HHTTCEE---EEEESCHHHHHHHHHHH
T ss_pred CCCEEEEeeccchHHHHHH----HHcCCEE---EEEECCHHHHHHHHHHH
Confidence 4468999999999999887 3345554 59999999999888774
No 66
>3i91_A Chromobox protein homolog 8; chromobox homolog 8, CBX8, structural genomics structural genomics consortium, SGC, chromatin regulator, N phosphoprotein, repressor; HET: M3L; 1.55A {Homo sapiens} SCOP: b.34.13.2 PDB: 3gv6_A* 3i90_A*
Probab=95.63 E-value=0.0028 Score=49.87 Aligned_cols=35 Identities=26% Similarity=0.569 Sum_probs=30.4
Q ss_pred cccceeeEeeccCCCCCCCCcccccccccccchhhh
Q 047980 472 KRGLYLKVRWRNYGPSEDTWEPIEGLSNCGEKIKEF 507 (718)
Q Consensus 472 ~~~l~~~~~w~~~~~~~d~w~~~~~~~~~~~~i~e~ 507 (718)
+..+.+.|.|+||+.+++||+|..+|. |+..|.+|
T Consensus 16 ~g~~~YlVkWkGy~~~~~TWEp~~nl~-~~~li~~f 50 (54)
T 3i91_A 16 KGRMEYLVKWKGWSQKYSTWEPEENIL-DARLLAAF 50 (54)
T ss_dssp TTEEEEEEEETTSCGGGCEEEEGGGBC-CHHHHHHH
T ss_pred CCcEEEEEEEeCCCcccCcccchhHCC-CHHHHHHH
Confidence 456889999999999999999999997 57777776
No 67
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=95.62 E-value=0.018 Score=60.83 Aligned_cols=47 Identities=19% Similarity=0.185 Sum_probs=34.8
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH 386 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~ 386 (718)
+...+|||++||.|+.++-|..-+. .+..+ .|+|+++.+++..+.|.
T Consensus 117 ~~g~~VLDlg~G~G~~t~~la~~~~-~~~~v---~avD~s~~~l~~a~~~~ 163 (315)
T 1ixk_A 117 KPGEIVADMAAAPGGKTSYLAQLMR-NDGVI---YAFDVDENRLRETRLNL 163 (315)
T ss_dssp CTTCEEEECCSSCSHHHHHHHHHTT-TCSEE---EEECSCHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhC-CCCEE---EEEcCCHHHHHHHHHHH
Confidence 3456899999999999988842111 12444 59999999999888874
No 68
>3mts_A Histone-lysine N-methyltransferase SUV39H1; histone methyltransferase, histone-lysine N-methyltransferas SUV39H1, histone H3, TRI-methylation; 2.20A {Homo sapiens}
Probab=95.57 E-value=0.0031 Score=51.53 Aligned_cols=37 Identities=41% Similarity=0.839 Sum_probs=32.4
Q ss_pred cccceeeEeeccCCCCCCCCcccccccccccchhhhhh
Q 047980 472 KRGLYLKVRWRNYGPSEDTWEPIEGLSNCGEKIKEFVT 509 (718)
Q Consensus 472 ~~~l~~~~~w~~~~~~~d~w~~~~~~~~~~~~i~e~~~ 509 (718)
+..+.+.|.|+||+.+++||+|..+|. |++.|.+|..
T Consensus 13 ~g~~~YlVKWkGy~~~~~TWEp~~nl~-c~~li~~f~~ 49 (64)
T 3mts_A 13 REQEYYLVKWRGYPDSESTWEPRQNLK-CVRILKQFHK 49 (64)
T ss_dssp SSCEEEEEEETTSCGGGCEEEEGGGCC-CHHHHHHHHH
T ss_pred CCeEEEEEEEecCCCcCCcEeEHHHCC-CHHHHHHHHH
Confidence 346789999999999999999999995 9999988854
No 69
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=95.52 E-value=0.03 Score=54.94 Aligned_cols=45 Identities=18% Similarity=0.181 Sum_probs=34.2
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH 386 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~ 386 (718)
...++|||.||.|.++.-|.. ...+.++ .+||+++.+++..+.|.
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~--~~p~~~v---~gvD~s~~~l~~a~~~~ 85 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAK--QNPDINY---IGIDIQKSVLSYALDKV 85 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHH--HCTTSEE---EEEESCHHHHHHHHHHH
T ss_pred CCCeEEEEccCcCHHHHHHHH--HCCCCCE---EEEEcCHHHHHHHHHHH
Confidence 356799999999999988732 1124555 49999999998887763
No 70
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=95.46 E-value=0.014 Score=62.96 Aligned_cols=55 Identities=25% Similarity=0.337 Sum_probs=42.9
Q ss_pred cceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC-----CCceeecCchHHHH
Q 047980 339 VKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH-----PETEVRNESAEDFL 400 (718)
Q Consensus 339 ~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~-----p~~~v~~~~~~~~l 400 (718)
-+|||||||.|++++-|. ..+-++ .+||+++.|++..+.|. .+..+++.|+++++
T Consensus 215 ~~vLDl~cG~G~~~l~la----~~~~~V---~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~ 274 (369)
T 3bt7_A 215 GDLLELYCGNGNFSLALA----RNFDRV---LATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFT 274 (369)
T ss_dssp SEEEEESCTTSHHHHHHG----GGSSEE---EEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHH
T ss_pred CEEEEccCCCCHHHHHHH----hcCCEE---EEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHH
Confidence 469999999999998773 223333 59999999999888774 46788888887764
No 71
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=95.45 E-value=0.021 Score=53.13 Aligned_cols=57 Identities=26% Similarity=0.282 Sum_probs=46.3
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCC----CceeecCchHHHH
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHP----ETEVRNESAEDFL 400 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p----~~~v~~~~~~~~l 400 (718)
...++||++||.|.++..+ ...|.+ + .+||+++.+++..+.|.. +..+++.|+.+++
T Consensus 41 ~~~~vLD~GcG~G~~~~~l----~~~~~~-v--~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~ 101 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEA----ASEGWE-A--VLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFL 101 (171)
T ss_dssp TCCEEEEETCSSCHHHHHH----HHTTCE-E--EEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHH
T ss_pred CCCeEEEeCCCcCHHHHHH----HHCCCe-E--EEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHH
Confidence 4568999999999998887 556777 3 599999999998888754 6788888887753
No 72
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=95.29 E-value=0.15 Score=48.80 Aligned_cols=45 Identities=22% Similarity=0.257 Sum_probs=34.2
Q ss_pred ccccceeccccccchhhHhHhhhhhhcC--CeeEeEEeecccHHHHHHHHhhC
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAG--LNLVTRWAVDINEYACQSLKLNH 386 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG--~~~~~~~avd~~~~A~~t~~~N~ 386 (718)
+...++||+.||.|.++.-|. +..| .++ .+||+++.+++..+.|.
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~---~~~~~~~~v---~~vD~s~~~~~~a~~~~ 67 (197)
T 3eey_A 21 KEGDTVVDATCGNGNDTAFLA---SLVGENGRV---FGFDIQDKAIANTTKKL 67 (197)
T ss_dssp CTTCEEEESCCTTSHHHHHHH---HHHCTTCEE---EEECSCHHHHHHHHHHH
T ss_pred CCCCEEEEcCCCCCHHHHHHH---HHhCCCCEE---EEEECCHHHHHHHHHHH
Confidence 345689999999999988774 2222 344 59999999998888773
No 73
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=95.24 E-value=0.19 Score=48.49 Aligned_cols=44 Identities=16% Similarity=0.125 Sum_probs=34.8
Q ss_pred ccccceeccccccchhhHhHhhhhhhcC--CeeEeEEeecccHHHHHHHHhhC
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAG--LNLVTRWAVDINEYACQSLKLNH 386 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG--~~~~~~~avd~~~~A~~t~~~N~ 386 (718)
....++||+.||.|.++.-+. ..| .++ .+||+++.+++..+.|.
T Consensus 39 ~~~~~vLDiG~G~G~~~~~la----~~~~~~~v---~~vD~s~~~~~~a~~~~ 84 (204)
T 3e05_A 39 QDDLVMWDIGAGSASVSIEAS----NLMPNGRI---FALERNPQYLGFIRDNL 84 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHHH----HHCTTSEE---EEEECCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCHHHHHHH----HHCCCCEE---EEEeCCHHHHHHHHHHH
Confidence 345689999999999988873 334 454 59999999999888774
No 74
>3h91_A Chromobox protein homolog 2; human chromobox homolog 2, CBX2, structural genomics, structural genomics consortium, SGC, chromatin regulator, D binding, nucleus; HET: M3L; 1.50A {Homo sapiens} SCOP: b.34.13.2 PDB: 2k28_A 3i8z_A
Probab=95.24 E-value=0.0045 Score=48.68 Aligned_cols=35 Identities=29% Similarity=0.604 Sum_probs=29.8
Q ss_pred cccceeeEeeccCCCCCCCCcccccccccccchhhh
Q 047980 472 KRGLYLKVRWRNYGPSEDTWEPIEGLSNCGEKIKEF 507 (718)
Q Consensus 472 ~~~l~~~~~w~~~~~~~d~w~~~~~~~~~~~~i~e~ 507 (718)
+..+.+.|.|+||+.+++||+|..+|. |+..|.+|
T Consensus 16 ~g~~~YlVkWkGy~~~~~TWEp~~nl~-~~~li~~f 50 (54)
T 3h91_A 16 KGKLEYLVKWRGWSSKHNSWEPEENIL-DPRLLLAF 50 (54)
T ss_dssp TTEEEEEEEETTSCGGGCEEEEGGGBC-SHHHHHHH
T ss_pred CCcEEEEEEEeCCCCcCCCeecHhHCC-CHHHHHHH
Confidence 456889999999999999999999987 46677766
No 75
>1pfb_A Polycomb protein; chromatin, histone methylation, polycomb, chromodomain, peptide binding protein; HET: M3L; 1.40A {Drosophila melanogaster} SCOP: b.34.13.2
Probab=95.22 E-value=0.0052 Score=48.50 Aligned_cols=48 Identities=25% Similarity=0.511 Sum_probs=36.2
Q ss_pred HHHHHHHhHhcCCchhhhcccceeeEeeccCCCCCCCCcccccccccccchhhhh
Q 047980 454 FEVEKILKICYGDPKEIKKRGLYLKVRWRNYGPSEDTWEPIEGLSNCGEKIKEFV 508 (718)
Q Consensus 454 ~~v~~l~~i~~g~p~~~~~~~l~~~~~w~~~~~~~d~w~~~~~~~~~~~~i~e~~ 508 (718)
|+|++|++.. ..+..+.+.|.|+||..+++||+|..+|. |++.|.+|.
T Consensus 4 y~VE~Il~~r------~~~g~~~YlVKWkgy~~~~~TWEp~~~l~-~~~li~~f~ 51 (55)
T 1pfb_A 4 YAAEKIIQKR------VKKGVVEYRVKWKGWNQRYNTWEPEVNIL-DRRLIDIYE 51 (55)
T ss_dssp EEEEEEEEEE------EETTEEEEEEEETTSCGGGCEEEEGGGCC-STHHHHHHH
T ss_pred EEEEEEEEEE------EeCCeEEEEEEEcCCCCccCcEeEHHHCC-CHHHHHHHH
Confidence 4455555542 22456889999999999999999999987 577777773
No 76
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=95.20 E-value=0.019 Score=62.77 Aligned_cols=59 Identities=29% Similarity=0.302 Sum_probs=44.5
Q ss_pred cccceeccccccchhhHhHhhhhhh-cCCeeEeEEeecccHHHHHHHHhhC-----CC--ceeecCchHHHH
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANL-AGLNLVTRWAVDINEYACQSLKLNH-----PE--TEVRNESAEDFL 400 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~-aG~~~~~~~avd~~~~A~~t~~~N~-----p~--~~v~~~~~~~~l 400 (718)
...+|||||||.|++++=+. .. .|..-+ +|||+|+.|++..+.|. .+ ..+++.|+.+++
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa---~~~~ga~~V--~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l 118 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFL---LETSCVEKA--YANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFL 118 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHH---HHCSCEEEE--EEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHH
T ss_pred CCCEEEECCCcccHHHHHHH---HhCCCCCEE--EEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHH
Confidence 34689999999999987662 22 354444 69999999998888774 23 778899997764
No 77
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=95.12 E-value=0.19 Score=51.18 Aligned_cols=47 Identities=13% Similarity=0.128 Sum_probs=35.7
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCCC
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPE 388 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p~ 388 (718)
...++|||.||+|.++.-|.. +..+.++ .+||+++.+++..+.|...
T Consensus 36 ~~~~VLDlG~G~G~~~l~la~--~~~~~~v---~gvDi~~~~~~~a~~n~~~ 82 (260)
T 2ozv_A 36 RACRIADLGAGAGAAGMAVAA--RLEKAEV---TLYERSQEMAEFARRSLEL 82 (260)
T ss_dssp SCEEEEECCSSSSHHHHHHHH--HCTTEEE---EEEESSHHHHHHHHHHTTS
T ss_pred CCCEEEEeCChHhHHHHHHHH--hCCCCeE---EEEECCHHHHHHHHHHHHh
Confidence 356899999999999887732 1123444 5999999999999998653
No 78
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=95.01 E-value=0.033 Score=57.94 Aligned_cols=44 Identities=18% Similarity=0.284 Sum_probs=34.8
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH 386 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~ 386 (718)
...++|||+||.|.++.-|. ...+.++ +|||+++.|++..+.|.
T Consensus 123 ~~~~vLDlG~GsG~~~~~la---~~~~~~v---~~vDis~~al~~A~~n~ 166 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVA---KFSDAIV---FATDVSSKAVEIARKNA 166 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHH---HHSSCEE---EEEESCHHHHHHHHHHH
T ss_pred CCCEEEEEeCchhHHHHHHH---HCCCCEE---EEEECCHHHHHHHHHHH
Confidence 34589999999999998883 2235554 59999999999998884
No 79
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=94.98 E-value=0.026 Score=53.25 Aligned_cols=57 Identities=21% Similarity=0.229 Sum_probs=43.4
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC------CCceeecCchHHH
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH------PETEVRNESAEDF 399 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~------p~~~v~~~~~~~~ 399 (718)
...++||++||.|.++..+ ...|..-+ .+||+++.+++..+.|. +...+++.|+.++
T Consensus 31 ~~~~vLDlGcG~G~~~~~l----~~~~~~~v--~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 93 (177)
T 2esr_A 31 NGGRVLDLFAGSGGLAIEA----VSRGMSAA--VLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERA 93 (177)
T ss_dssp CSCEEEEETCTTCHHHHHH----HHTTCCEE--EEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHH
T ss_pred CCCeEEEeCCCCCHHHHHH----HHcCCCEE--EEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHh
Confidence 4568999999999999877 33454323 59999999999888875 3467778887664
No 80
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=94.95 E-value=0.068 Score=59.91 Aligned_cols=46 Identities=15% Similarity=0.179 Sum_probs=34.8
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH 386 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~ 386 (718)
...+||||+||.||.++-|..-+. .+..| .|+|+++.+++..+.|.
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~-~~g~V---~avDis~~~l~~~~~n~ 162 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMN-NEGAI---LANEFSASRVKVLHANI 162 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTT-TCSEE---EEECSSHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCC-CCCEE---EEEECCHHHHHHHHHHH
Confidence 456899999999999988842111 12334 59999999999988883
No 81
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=94.86 E-value=0.32 Score=47.89 Aligned_cols=43 Identities=16% Similarity=0.017 Sum_probs=36.0
Q ss_pred cceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCCC
Q 047980 339 VKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPE 388 (718)
Q Consensus 339 ~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p~ 388 (718)
.+|||+-||.|.++.-| ...|.++ .+||+++.+++..+.+.+.
T Consensus 68 ~~vLDiGcG~G~~~~~l----~~~~~~v---~gvD~s~~~~~~a~~~~~~ 110 (235)
T 3lcc_A 68 GRALVPGCGGGHDVVAM----ASPERFV---VGLDISESALAKANETYGS 110 (235)
T ss_dssp EEEEEETCTTCHHHHHH----CBTTEEE---EEECSCHHHHHHHHHHHTT
T ss_pred CCEEEeCCCCCHHHHHH----HhCCCeE---EEEECCHHHHHHHHHHhhc
Confidence 49999999999999877 4567765 4999999999988887654
No 82
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=94.85 E-value=0.23 Score=48.08 Aligned_cols=43 Identities=21% Similarity=0.214 Sum_probs=35.6
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH 386 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~ 386 (718)
...++|||-||.|.++.-| ...|.++ .++|+++.+++..+.+.
T Consensus 43 ~~~~vLDiGcG~G~~~~~l----~~~~~~v---~~vD~s~~~~~~a~~~~ 85 (211)
T 3e23_A 43 AGAKILELGCGAGYQAEAM----LAAGFDV---DATDGSPELAAEASRRL 85 (211)
T ss_dssp TTCEEEESSCTTSHHHHHH----HHTTCEE---EEEESCHHHHHHHHHHH
T ss_pred CCCcEEEECCCCCHHHHHH----HHcCCeE---EEECCCHHHHHHHHHhc
Confidence 4568999999999998877 4557765 49999999998888775
No 83
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=94.81 E-value=0.15 Score=54.87 Aligned_cols=44 Identities=16% Similarity=0.183 Sum_probs=35.0
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCC--eeEeEEeecccHHHHHHHHhhC
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGL--NLVTRWAVDINEYACQSLKLNH 386 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~--~~~~~~avd~~~~A~~t~~~N~ 386 (718)
....++||++||.|++..-+ ...|. ++ .++|+++.+.+..+.|.
T Consensus 216 ~~~~~vLD~gCGsG~~~i~~----a~~~~~~~v---~g~Dis~~~l~~A~~n~ 261 (373)
T 3tm4_A 216 LDGGSVLDPMCGSGTILIEL----ALRRYSGEI---IGIEKYRKHLIGAEMNA 261 (373)
T ss_dssp CCSCCEEETTCTTCHHHHHH----HHTTCCSCE---EEEESCHHHHHHHHHHH
T ss_pred CCCCEEEEccCcCcHHHHHH----HHhCCCCeE---EEEeCCHHHHHHHHHHH
Confidence 45678999999999998777 33444 44 59999999999888884
No 84
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=94.81 E-value=0.56 Score=45.18 Aligned_cols=54 Identities=22% Similarity=0.195 Sum_probs=42.0
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCCCceeecCchHH
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAED 398 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p~~~v~~~~~~~ 398 (718)
...+|||+-||.|.++.-| ...|.++ .++|+++.+.+..+.+ +...+...++.+
T Consensus 52 ~~~~vLdiG~G~G~~~~~l----~~~~~~v---~~vD~s~~~~~~a~~~-~~~~~~~~~~~~ 105 (227)
T 3e8s_A 52 QPERVLDLGCGEGWLLRAL----ADRGIEA---VGVDGDRTLVDAARAA-GAGEVHLASYAQ 105 (227)
T ss_dssp CCSEEEEETCTTCHHHHHH----HTTTCEE---EEEESCHHHHHHHHHT-CSSCEEECCHHH
T ss_pred CCCEEEEeCCCCCHHHHHH----HHCCCEE---EEEcCCHHHHHHHHHh-cccccchhhHHh
Confidence 4579999999999998877 4558765 4999999999988888 555565555543
No 85
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=94.68 E-value=0.16 Score=49.82 Aligned_cols=48 Identities=23% Similarity=0.203 Sum_probs=37.2
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCCC
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPE 388 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p~ 388 (718)
....+|||+-||.|.++.-|.. ...|.++ .++|+++.+++..+.+.+.
T Consensus 43 ~~~~~vLDiG~G~G~~~~~l~~--~~~~~~v---~~vD~s~~~~~~a~~~~~~ 90 (234)
T 3dtn_A 43 TENPDILDLGAGTGLLSAFLME--KYPEATF---TLVDMSEKMLEIAKNRFRG 90 (234)
T ss_dssp CSSCEEEEETCTTSHHHHHHHH--HCTTCEE---EEEESCHHHHHHHHHHTCS
T ss_pred CCCCeEEEecCCCCHHHHHHHH--hCCCCeE---EEEECCHHHHHHHHHhhcc
Confidence 4568999999999999988732 1126665 4999999999988888653
No 86
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=94.57 E-value=0.057 Score=57.04 Aligned_cols=47 Identities=13% Similarity=0.099 Sum_probs=35.2
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH 386 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~ 386 (718)
+...+|||++||.||.++-|..-+... ..| +|+|+++.+++..+.|.
T Consensus 101 ~~g~~VLDlcaG~G~kt~~la~~~~~~-g~V---~a~D~~~~~l~~~~~n~ 147 (309)
T 2b9e_A 101 PPGSHVIDACAAPGNKTSHLAALLKNQ-GKI---FAFDLDAKRLASMATLL 147 (309)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTTC-SEE---EEEESCHHHHHHHHHHH
T ss_pred CCCCEEEEeCCChhHHHHHHHHHhCCC-CEE---EEEeCCHHHHHHHHHHH
Confidence 345689999999999998884321112 333 59999999999988883
No 87
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=94.57 E-value=0.36 Score=45.12 Aligned_cols=44 Identities=20% Similarity=0.213 Sum_probs=34.3
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH 386 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~ 386 (718)
....++||+.||.|.++.-+ ...+.++ .++|+++.+++..+.|.
T Consensus 32 ~~~~~vldiG~G~G~~~~~l----~~~~~~v---~~~D~~~~~~~~a~~~~ 75 (192)
T 1l3i_A 32 GKNDVAVDVGCGTGGVTLEL----AGRVRRV---YAIDRNPEAISTTEMNL 75 (192)
T ss_dssp CTTCEEEEESCTTSHHHHHH----HTTSSEE---EEEESCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCHHHHHH----HHhcCEE---EEEECCHHHHHHHHHHH
Confidence 34568999999999988877 4455443 59999999998887763
No 88
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=94.53 E-value=0.039 Score=52.11 Aligned_cols=57 Identities=28% Similarity=0.289 Sum_probs=43.3
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC------CCceeecCchHHH
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH------PETEVRNESAEDF 399 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~------p~~~v~~~~~~~~ 399 (718)
...++||++||.|+++.-+ ...|..-+ .+||+++.+++..+.|. +...+++.|+.++
T Consensus 44 ~~~~vLD~GcG~G~~~~~~----~~~~~~~v--~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 106 (187)
T 2fhp_A 44 DGGMALDLYSGSGGLAIEA----VSRGMDKS--ICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRA 106 (187)
T ss_dssp SSCEEEETTCTTCHHHHHH----HHTTCSEE--EEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHH
T ss_pred CCCCEEEeCCccCHHHHHH----HHcCCCEE--EEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHH
Confidence 4568999999999998876 23453223 59999999998888775 3577888888765
No 89
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=94.36 E-value=0.051 Score=55.60 Aligned_cols=45 Identities=27% Similarity=0.283 Sum_probs=34.8
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH 386 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~ 386 (718)
...++||+.||.|.++.-|.. ...+.++ .++|+++.+++..+.|.
T Consensus 109 ~~~~vLDlG~GsG~~~~~la~--~~~~~~v---~~vD~s~~~l~~a~~n~ 153 (276)
T 2b3t_A 109 QPCRILDLGTGTGAIALALAS--ERPDCEI---IAVDRMPDAVSLAQRNA 153 (276)
T ss_dssp SCCEEEEETCTTSHHHHHHHH--HCTTSEE---EEECSSHHHHHHHHHHH
T ss_pred CCCEEEEecCCccHHHHHHHH--hCCCCEE---EEEECCHHHHHHHHHHH
Confidence 456899999999999887732 1224554 59999999999988884
No 90
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=94.25 E-value=0.032 Score=61.36 Aligned_cols=57 Identities=18% Similarity=0.243 Sum_probs=46.0
Q ss_pred ccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCC-------CceeecCchHHHHH
Q 047980 338 DVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHP-------ETEVRNESAEDFLT 401 (718)
Q Consensus 338 ~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p-------~~~v~~~~~~~~l~ 401 (718)
..+|||||||.|+.+.-| ...|.++ .+||+|+.+++..+.|.. +..+++.|+.+++.
T Consensus 94 g~~VLDLgcG~G~~al~L----A~~g~~V---~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~ 157 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIAL----MSKASQG---IYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLP 157 (410)
T ss_dssp TCEEEESSCSSSHHHHHH----HTTCSEE---EEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHH
T ss_pred CCEEEEeCCCchHHHHHH----HhcCCEE---EEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhh
Confidence 468999999999999877 4456655 499999999999888853 46788999987653
No 91
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=94.21 E-value=0.71 Score=48.05 Aligned_cols=45 Identities=9% Similarity=0.079 Sum_probs=34.3
Q ss_pred ccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCC
Q 047980 338 DVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHP 387 (718)
Q Consensus 338 ~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p 387 (718)
..+||||.||.|+++.-+. +..|..-+ .+||+|+.+++..+.|++
T Consensus 91 ~~~VLdiG~G~G~~~~~l~---~~~~~~~v--~~vDid~~~~~~a~~~~~ 135 (296)
T 1inl_A 91 PKKVLIIGGGDGGTLREVL---KHDSVEKA--ILCEVDGLVIEAARKYLK 135 (296)
T ss_dssp CCEEEEEECTTCHHHHHHT---TSTTCSEE--EEEESCHHHHHHHHHHCH
T ss_pred CCEEEEEcCCcCHHHHHHH---hcCCCCEE--EEEECCHHHHHHHHHHhH
Confidence 4689999999999988772 22233223 599999999999888863
No 92
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=94.17 E-value=0.057 Score=58.67 Aligned_cols=58 Identities=21% Similarity=0.255 Sum_probs=43.8
Q ss_pred cccceeccccccchhhHhHhhhhhhcC-CeeEeEEeecccHHHHHHHHhhC--------------------CCceeecCc
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAG-LNLVTRWAVDINEYACQSLKLNH--------------------PETEVRNES 395 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG-~~~~~~~avd~~~~A~~t~~~N~--------------------p~~~v~~~~ 395 (718)
...++||||||+|++++-+. +..| .++ +|||+|+.|++..+.|. .+..+.+.|
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a---~~~~~~~V---~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~D 120 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFA---LETPAEEV---WLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDD 120 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHH---HHSSCSEE---EEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESC
T ss_pred CCCEEEECCCchhHHHHHHH---HhCCCCeE---EEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCc
Confidence 35689999999999998873 3333 443 69999999998887762 126788889
Q ss_pred hHHHH
Q 047980 396 AEDFL 400 (718)
Q Consensus 396 ~~~~l 400 (718)
+.+++
T Consensus 121 a~~~~ 125 (378)
T 2dul_A 121 ANRLM 125 (378)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87764
No 93
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=93.92 E-value=0.053 Score=52.13 Aligned_cols=48 Identities=21% Similarity=0.362 Sum_probs=26.2
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCCC
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPE 388 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p~ 388 (718)
....++||+.||.|.++.-+.. ...+.++ .++|+++.+++..+.|...
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~--~~~~~~v---~~vD~~~~~~~~a~~~~~~ 76 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIAL--ACPGVSV---TAVDLSMDALAVARRNAER 76 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHH--HCTTEEE---EEEECC-------------
T ss_pred CCCCEEEEecCCHhHHHHHHHH--hCCCCeE---EEEECCHHHHHHHHHHHHH
Confidence 4567999999999999988732 1124454 5999999999988888653
No 94
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=93.90 E-value=0.37 Score=47.28 Aligned_cols=44 Identities=9% Similarity=0.161 Sum_probs=33.6
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhh
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLN 385 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N 385 (718)
...++||+-||.|.++..|.. ...+.++ .|||+++.+++..+.|
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~--~~p~~~v---~giD~s~~~l~~a~~~ 81 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAK--QNPDINY---IGIELFKSVIVTAVQK 81 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHH--HCTTSEE---EEECSCHHHHHHHHHH
T ss_pred CCceEEEEecCCCHHHHHHHH--HCCCCCE---EEEEechHHHHHHHHH
Confidence 346799999999999988732 1225665 4999999998877766
No 95
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=93.79 E-value=0.13 Score=54.78 Aligned_cols=45 Identities=16% Similarity=0.276 Sum_probs=34.9
Q ss_pred ccccceeccccccchhhHhHhhhhhhc--CCeeEeEEeecccHHHHHHHHhhC
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLA--GLNLVTRWAVDINEYACQSLKLNH 386 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~a--G~~~~~~~avd~~~~A~~t~~~N~ 386 (718)
....++||+|||.|.+..-+. ..+ +.++ +++|+|+.+++..+.|.
T Consensus 202 ~~~~~vLD~gcGsG~~~ie~a---~~~~~~~~v---~g~Di~~~~i~~a~~n~ 248 (354)
T 3tma_A 202 RPGMRVLDPFTGSGTIALEAA---STLGPTSPV---YAGDLDEKRLGLAREAA 248 (354)
T ss_dssp CTTCCEEESSCTTSHHHHHHH---HHHCTTSCE---EEEESCHHHHHHHHHHH
T ss_pred CCCCEEEeCCCCcCHHHHHHH---HhhCCCceE---EEEECCHHHHHHHHHHH
Confidence 345689999999999887663 223 2554 59999999999998884
No 96
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=93.63 E-value=0.091 Score=55.37 Aligned_cols=61 Identities=16% Similarity=0.153 Sum_probs=46.3
Q ss_pred cccceeccccccchhhHhHhhhhhhc-CCeeEeEEeecccHHHHHHHHhhC----CCceeecCchHHHHHHH
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLA-GLNLVTRWAVDINEYACQSLKLNH----PETEVRNESAEDFLTLL 403 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~a-G~~~~~~~avd~~~~A~~t~~~N~----p~~~v~~~~~~~~l~~l 403 (718)
...++||++||.||.+..|. +.. |.++ .|||+|+.|++..+.|. +...+++.|..++...+
T Consensus 26 ~g~~vLD~g~G~G~~s~~la---~~~~~~~V---igvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~l~~~l 91 (301)
T 1m6y_A 26 DEKIILDCTVGEGGHSRAIL---EHCPGCRI---IGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFLL 91 (301)
T ss_dssp TTCEEEETTCTTSHHHHHHH---HHCTTCEE---EEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHHH
T ss_pred CCCEEEEEeCCcCHHHHHHH---HHCCCCEE---EEEECCHHHHHHHHHHHHhcCCcEEEEECCHHHHHHHH
Confidence 45689999999999999883 232 4554 59999999999888775 45778888887764333
No 97
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=93.63 E-value=0.089 Score=54.05 Aligned_cols=57 Identities=19% Similarity=0.160 Sum_probs=44.4
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccH-------HHHHHHHhhC-----CC-ceeecCchHHHH
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINE-------YACQSLKLNH-----PE-TEVRNESAEDFL 400 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~-------~A~~t~~~N~-----p~-~~v~~~~~~~~l 400 (718)
...+|||++||.|.++.-| ...|.+| .+||+++ .+.+..+.|. .+ ..+++.|+.+++
T Consensus 83 ~~~~VLDlgcG~G~~a~~l----A~~g~~V---~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l 152 (258)
T 2r6z_A 83 AHPTVWDATAGLGRDSFVL----ASLGLTV---TAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQM 152 (258)
T ss_dssp GCCCEEETTCTTCHHHHHH----HHTTCCE---EEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHH
T ss_pred CcCeEEEeeCccCHHHHHH----HHhCCEE---EEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHH
Confidence 3468999999999998877 3457665 4999999 8888777663 23 778889998765
No 98
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=93.61 E-value=0.11 Score=56.31 Aligned_cols=43 Identities=26% Similarity=0.280 Sum_probs=35.7
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH 386 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~ 386 (718)
...+||||.||.|.++.-+ ...|.++ .+||+++.+++..+.|.
T Consensus 233 ~~~~VLDlGcG~G~~~~~l----a~~g~~V---~gvDis~~al~~A~~n~ 275 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPL----ARMGAEV---VGVEDDLASVLSLQKGL 275 (381)
T ss_dssp TTCEEEEETCTTSTTHHHH----HHTTCEE---EEEESBHHHHHHHHHHH
T ss_pred CCCEEEEEeeeCCHHHHHH----HHcCCEE---EEEECCHHHHHHHHHHH
Confidence 4568999999999999887 4457765 59999999999888874
No 99
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=93.53 E-value=0.079 Score=50.95 Aligned_cols=54 Identities=20% Similarity=0.278 Sum_probs=46.6
Q ss_pred ccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCCCceeecCchHH
Q 047980 338 DVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAED 398 (718)
Q Consensus 338 ~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p~~~v~~~~~~~ 398 (718)
..++||+-||.|.++.-| ...|.++ .+||+++.+.+..+.++++..++..|+.+
T Consensus 42 ~~~vLDiGcG~G~~~~~l----~~~~~~v---~gvD~s~~~~~~a~~~~~~~~~~~~d~~~ 95 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHL----ASLGHQI---EGLEPATRLVELARQTHPSVTFHHGTITD 95 (203)
T ss_dssp CSCEEEETCTTCHHHHHH----HHTTCCE---EEECCCHHHHHHHHHHCTTSEEECCCGGG
T ss_pred CCeEEEecCCCCHHHHHH----HhcCCeE---EEEeCCHHHHHHHHHhCCCCeEEeCcccc
Confidence 679999999999998877 4558766 49999999999999999999988887755
No 100
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=93.51 E-value=0.11 Score=57.62 Aligned_cols=45 Identities=22% Similarity=0.219 Sum_probs=34.4
Q ss_pred ccccceeccccccchhhHhHhhhhhhcC-CeeEeEEeecccHHHHHHHHhh
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAG-LNLVTRWAVDINEYACQSLKLN 385 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG-~~~~~~~avd~~~~A~~t~~~N 385 (718)
....+|||++||.||.++-|..-+ .| ..+ .|+|+++.+++..+.|
T Consensus 258 ~~g~~VLDlgaG~G~~t~~la~~~--~~~~~v---~a~D~s~~~l~~~~~~ 303 (450)
T 2yxl_A 258 KPGETVVDLAAAPGGKTTHLAELM--KNKGKI---YAFDVDKMRMKRLKDF 303 (450)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHT--TTCSEE---EEECSCHHHHHHHHHH
T ss_pred CCcCEEEEeCCCccHHHHHHHHHc--CCCCEE---EEEcCCHHHHHHHHHH
Confidence 344689999999999998884211 22 344 5999999999988877
No 101
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=93.26 E-value=0.061 Score=57.20 Aligned_cols=55 Identities=24% Similarity=0.422 Sum_probs=40.0
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC------CCceeecCchHHH
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH------PETEVRNESAEDF 399 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~------p~~~v~~~~~~~~ 399 (718)
...++||||||.|+++.- . + .+.++ +|||+++.|++..+.|. +...+++.|+.++
T Consensus 195 ~~~~VLDlg~G~G~~~l~-a---~-~~~~V---~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~ 255 (336)
T 2yx1_A 195 LNDVVVDMFAGVGPFSIA-C---K-NAKKI---YAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREV 255 (336)
T ss_dssp TTCEEEETTCTTSHHHHH-T---T-TSSEE---EEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGC
T ss_pred CCCEEEEccCccCHHHHh-c---c-CCCEE---EEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHh
Confidence 345899999999988765 3 3 23333 59999999999888874 3466777666543
No 102
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=93.23 E-value=1.9 Score=42.11 Aligned_cols=41 Identities=17% Similarity=0.181 Sum_probs=32.1
Q ss_pred ccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC
Q 047980 338 DVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH 386 (718)
Q Consensus 338 ~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~ 386 (718)
..+|||+-||.|.++.-|. .. .++ .++|+++.+++..+.|.
T Consensus 34 ~~~vLdiG~G~G~~~~~l~----~~-~~v---~~vD~s~~~~~~a~~~~ 74 (243)
T 3d2l_A 34 GKRIADIGCGTGTATLLLA----DH-YEV---TGVDLSEEMLEIAQEKA 74 (243)
T ss_dssp TCEEEEESCTTCHHHHHHT----TT-SEE---EEEESCHHHHHHHHHHH
T ss_pred CCeEEEecCCCCHHHHHHh----hC-CeE---EEEECCHHHHHHHHHhh
Confidence 3689999999999988772 33 444 59999999988777663
No 103
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=93.13 E-value=0.074 Score=53.89 Aligned_cols=55 Identities=16% Similarity=0.188 Sum_probs=43.3
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC---CCceeecCchHH
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH---PETEVRNESAED 398 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~---p~~~v~~~~~~~ 398 (718)
...+|||+.||.|.++.-| ...|.++ .|||+|+.+++..+.|. ++..+++.|+.+
T Consensus 30 ~~~~VLDiG~G~G~lt~~l----~~~~~~v---~~vD~~~~~~~~a~~~~~~~~~v~~~~~D~~~ 87 (244)
T 1qam_A 30 EHDNIFEIGSGKGHFTLEL----VQRCNFV---TAIEIDHKLCKTTENKLVDHDNFQVLNKDILQ 87 (244)
T ss_dssp TTCEEEEECCTTSHHHHHH----HHHSSEE---EEECSCHHHHHHHHHHTTTCCSEEEECCCGGG
T ss_pred CCCEEEEEeCCchHHHHHH----HHcCCeE---EEEECCHHHHHHHHHhhccCCCeEEEEChHHh
Confidence 4568999999999999888 4456554 59999999999999886 456677776643
No 104
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=93.02 E-value=0.4 Score=51.64 Aligned_cols=38 Identities=13% Similarity=0.175 Sum_probs=28.5
Q ss_pred ccceeccccccchhhHhHhhhhhh--cCCeeEeEEeecccHHHHHH
Q 047980 338 DVKLLDLYSGCGAMSTGLCLGANL--AGLNLVTRWAVDINEYACQS 381 (718)
Q Consensus 338 ~~~~lDLFsG~Gg~s~Gl~~g~~~--aG~~~~~~~avd~~~~A~~t 381 (718)
..++||+.||.|++...+. +. .+.++ .|||+++.|++.
T Consensus 40 ~~~vLD~gcGtG~~~~~~~---~~~~~~~~i---~gvDi~~~~~~~ 79 (421)
T 2ih2_A 40 GGRVLEPACAHGPFLRAFR---EAHGTAYRF---VGVEIDPKALDL 79 (421)
T ss_dssp TCEEEEETCTTCHHHHHHH---HHHCSCSEE---EEEESCTTTCCC
T ss_pred CCEEEECCCCChHHHHHHH---HHhCCCCeE---EEEECCHHHHHh
Confidence 4489999999999998873 22 23444 599999988653
No 105
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=93.01 E-value=0.046 Score=56.39 Aligned_cols=54 Identities=15% Similarity=0.101 Sum_probs=38.5
Q ss_pred cceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC--------------CCceeecCchHHH
Q 047980 339 VKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH--------------PETEVRNESAEDF 399 (718)
Q Consensus 339 ~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~--------------p~~~v~~~~~~~~ 399 (718)
.+|||||||.|..+.-| ...|.+| .+||+++..+...+.|. ...++++.|+.++
T Consensus 90 ~~VLDl~~G~G~dal~l----A~~g~~V---~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~ 157 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVL----ASVGCRV---RMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTA 157 (258)
T ss_dssp CCEEETTCTTCHHHHHH----HHHTCCE---EEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHH
T ss_pred CEEEEcCCcCCHHHHHH----HHcCCEE---EEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHH
Confidence 68999999999998877 3347665 49999997655554442 2355667776655
No 106
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=92.93 E-value=0.27 Score=50.07 Aligned_cols=44 Identities=20% Similarity=0.197 Sum_probs=34.1
Q ss_pred cccceeccccccchhhHhHhhhhhhc--CCeeEeEEeecccHHHHHHHHhhC
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLA--GLNLVTRWAVDINEYACQSLKLNH 386 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~a--G~~~~~~~avd~~~~A~~t~~~N~ 386 (718)
...+|||+.||.|.++.-|. +.. +.++ .++|+++.+++..+.|.
T Consensus 112 ~~~~VLDiG~G~G~~~~~la---~~~~~~~~v---~~vD~s~~~~~~a~~~~ 157 (277)
T 1o54_A 112 EGDRIIDTGVGSGAMCAVLA---RAVGSSGKV---FAYEKREEFAKLAESNL 157 (277)
T ss_dssp TTCEEEEECCTTSHHHHHHH---HHTTTTCEE---EEECCCHHHHHHHHHHH
T ss_pred CCCEEEEECCcCCHHHHHHH---HHhCCCcEE---EEEECCHHHHHHHHHHH
Confidence 44589999999999988773 222 3454 59999999999888774
No 107
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=92.78 E-value=0.087 Score=57.90 Aligned_cols=46 Identities=24% Similarity=0.192 Sum_probs=34.3
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH 386 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~ 386 (718)
....+|||++||.||.++-+..- ..+..+ .|+|+++.+++..+.|.
T Consensus 245 ~~g~~VLDlgaG~G~~t~~la~~--~~~~~v---~a~D~~~~~l~~~~~~~ 290 (429)
T 1sqg_A 245 QNGEHILDLCAAPGGKTTHILEV--APEAQV---VAVDIDEQRLSRVYDNL 290 (429)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHH--CTTCEE---EEEESSTTTHHHHHHHH
T ss_pred CCcCeEEEECCCchHHHHHHHHH--cCCCEE---EEECCCHHHHHHHHHHH
Confidence 34568999999999999888421 112344 59999999988888774
No 108
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=92.61 E-value=0.14 Score=50.64 Aligned_cols=54 Identities=15% Similarity=0.159 Sum_probs=44.5
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCCCceeecCch
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESA 396 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p~~~v~~~~~ 396 (718)
....+|||+-||.|.++.-| ...|.++ .++|+++.+++..+.|.++..++..|+
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l----~~~~~~v---~~vD~s~~~~~~a~~~~~~~~~~~~d~ 100 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARF----GPQAARW---AAYDFSPELLKLARANAPHADVYEWNG 100 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHH----GGGSSEE---EEEESCHHHHHHHHHHCTTSEEEECCS
T ss_pred CCCCeEEEeCCCCCHHHHHH----HHcCCEE---EEEECCHHHHHHHHHhCCCceEEEcch
Confidence 34578999999999998887 4457765 499999999999999988888776655
No 109
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=92.43 E-value=0.12 Score=50.69 Aligned_cols=56 Identities=18% Similarity=0.197 Sum_probs=41.9
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC-----C-CceeecCchHH
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH-----P-ETEVRNESAED 398 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~-----p-~~~v~~~~~~~ 398 (718)
....++|||.||.|.++.-+ ...|.++ ++||+++.+++..+.|. + +..++..|+.+
T Consensus 54 ~~~~~vLDlGcG~G~~~~~l----a~~~~~v---~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~ 115 (204)
T 3njr_A 54 RRGELLWDIGGGSGSVSVEW----CLAGGRA---ITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPA 115 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHH----HHTTCEE---EEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTG
T ss_pred CCCCEEEEecCCCCHHHHHH----HHcCCEE---EEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhh
Confidence 34568999999999988777 3347665 59999999998888774 4 56666666644
No 110
>1x3p_A Cpsrp43; chromo-2 domain, chloroplasts, LHCP, protein translocation, unknown function; NMR {Arabidopsis thaliana} SCOP: b.34.13.2
Probab=92.31 E-value=0.046 Score=43.01 Aligned_cols=29 Identities=24% Similarity=0.613 Sum_probs=25.0
Q ss_pred eeeEeeccCCCCCCCCcccccccccccchhhhh
Q 047980 476 YLKVRWRNYGPSEDTWEPIEGLSNCGEKIKEFV 508 (718)
Q Consensus 476 ~~~~~w~~~~~~~d~w~~~~~~~~~~~~i~e~~ 508 (718)
.+.|.|+|| +++||+|..+|. ++.|.+|.
T Consensus 19 ~YlVKWkgy--~~~TWEp~~nL~--~~li~~f~ 47 (54)
T 1x3p_A 19 EYLVKWTDM--SDATWEPQDNVD--STLVLLYQ 47 (54)
T ss_dssp CBCCCCSSS--SSCSCSTTCCSS--SSSHHHHT
T ss_pred EEEEEECCC--CcCCccchHHCC--HHHHHHHH
Confidence 678999998 789999999986 77788773
No 111
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=92.28 E-value=0.84 Score=48.94 Aligned_cols=41 Identities=22% Similarity=0.242 Sum_probs=32.8
Q ss_pred ccceeccccccchhhHhHhhhhhhcCC--eeEeEEeecccHHHHHHHHhhC
Q 047980 338 DVKLLDLYSGCGAMSTGLCLGANLAGL--NLVTRWAVDINEYACQSLKLNH 386 (718)
Q Consensus 338 ~~~~lDLFsG~Gg~s~Gl~~g~~~aG~--~~~~~~avd~~~~A~~t~~~N~ 386 (718)
..+||||+ |.|.++..+ ...|. ++ .+||+++.+++..+.|.
T Consensus 173 ~~~VLDlG-G~G~~~~~l----a~~~~~~~v---~~vDi~~~~l~~a~~~~ 215 (373)
T 2qm3_A 173 NKDIFVLG-DDDLTSIAL----MLSGLPKRI---AVLDIDERLTKFIEKAA 215 (373)
T ss_dssp TCEEEEES-CTTCHHHHH----HHHTCCSEE---EEECSCHHHHHHHHHHH
T ss_pred CCEEEEEC-CCCHHHHHH----HHhCCCCEE---EEEECCHHHHHHHHHHH
Confidence 46899999 999998877 33443 43 59999999999888884
No 112
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=91.84 E-value=0.14 Score=51.47 Aligned_cols=55 Identities=15% Similarity=0.161 Sum_probs=46.5
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCCCceeecCchHH
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAED 398 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p~~~v~~~~~~~ 398 (718)
...+||||-||.|.++.-| ...|.++ .+||+++.+++..+.+.++..++..|+.+
T Consensus 50 ~~~~vLDiGcG~G~~~~~l----~~~~~~v---~gvD~s~~~~~~a~~~~~~~~~~~~d~~~ 104 (263)
T 3pfg_A 50 KAASLLDVACGTGMHLRHL----ADSFGTV---EGLELSADMLAIARRRNPDAVLHHGDMRD 104 (263)
T ss_dssp TCCEEEEETCTTSHHHHHH----TTTSSEE---EEEESCHHHHHHHHHHCTTSEEEECCTTT
T ss_pred CCCcEEEeCCcCCHHHHHH----HHcCCeE---EEEECCHHHHHHHHhhCCCCEEEECChHH
Confidence 3478999999999999888 4567765 49999999999999999988888877754
No 113
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=91.65 E-value=0.12 Score=53.12 Aligned_cols=55 Identities=20% Similarity=0.154 Sum_probs=43.8
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC---CCceeecCchHH
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH---PETEVRNESAED 398 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~---p~~~v~~~~~~~ 398 (718)
...+|||+.||.|.++.-| ...|.++ .|||+|+..++..+.|+ ++..+++.|+.+
T Consensus 29 ~~~~VLEIG~G~G~lt~~L----a~~~~~V---~avEid~~~~~~~~~~~~~~~~v~~i~~D~~~ 86 (255)
T 3tqs_A 29 KTDTLVEIGPGRGALTDYL----LTECDNL---ALVEIDRDLVAFLQKKYNQQKNITIYQNDALQ 86 (255)
T ss_dssp TTCEEEEECCTTTTTHHHH----TTTSSEE---EEEECCHHHHHHHHHHHTTCTTEEEEESCTTT
T ss_pred CcCEEEEEcccccHHHHHH----HHhCCEE---EEEECCHHHHHHHHHHHhhCCCcEEEEcchHh
Confidence 3568999999999999988 4456554 59999999999999886 466777777644
No 114
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=91.16 E-value=0.19 Score=52.44 Aligned_cols=56 Identities=13% Similarity=0.100 Sum_probs=44.0
Q ss_pred ccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC---CCceeecCchHHHH
Q 047980 338 DVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH---PETEVRNESAEDFL 400 (718)
Q Consensus 338 ~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~---p~~~v~~~~~~~~l 400 (718)
...+||||+|.|++..-+ .+|.+-+ ..||.++.++++++.|. ..+.|++.|...+|
T Consensus 92 ~~~~LDlfaGSGaLgiEa-----LS~~d~~--vfvE~~~~a~~~L~~Nl~~~~~~~V~~~D~~~~L 150 (283)
T 2oo3_A 92 LNSTLSYYPGSPYFAINQ-----LRSQDRL--YLCELHPTEYNFLLKLPHFNKKVYVNHTDGVSKL 150 (283)
T ss_dssp SSSSCCEEECHHHHHHHH-----SCTTSEE--EEECCSHHHHHHHTTSCCTTSCEEEECSCHHHHH
T ss_pred CCCceeEeCCcHHHHHHH-----cCCCCeE--EEEeCCHHHHHHHHHHhCcCCcEEEEeCcHHHHH
Confidence 446899999999876554 2344544 59999999999999998 56889999886654
No 115
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=91.16 E-value=1.5 Score=49.78 Aligned_cols=50 Identities=6% Similarity=-0.118 Sum_probs=35.3
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCe-------------eEeEEeecccHHHHHHHHhh
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLN-------------LVTRWAVDINEYACQSLKLN 385 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~-------------~~~~~avd~~~~A~~t~~~N 385 (718)
....+|+|.+||.|||.+.+..-+...+-+ ....+++|+|+.++..-+.|
T Consensus 168 ~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~n 230 (541)
T 2ar0_A 168 QPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMN 230 (541)
T ss_dssp CTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHH
T ss_pred CCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHH
Confidence 345799999999999988775433222210 11237999999999888877
No 116
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=91.10 E-value=0.12 Score=51.82 Aligned_cols=57 Identities=14% Similarity=0.156 Sum_probs=39.3
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhh-------------CCCceeecCchHH
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLN-------------HPETEVRNESAED 398 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N-------------~p~~~v~~~~~~~ 398 (718)
...++||++||.|+++..|.. ...+.++ .+||+++.+++..+.| .++..++..|+.+
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~--~~~~~~v---~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~ 118 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSP--AFPEDLI---LGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMK 118 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHH--HSTTSEE---EEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTS
T ss_pred CCCEEEEEcCCCCHHHHHHHH--hCCCCCE---EEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHH
Confidence 456899999999999988832 1123444 5999999988766543 3456666666543
No 117
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=90.73 E-value=0.17 Score=52.75 Aligned_cols=43 Identities=19% Similarity=0.182 Sum_probs=35.0
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH 386 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~ 386 (718)
..-.|||+|||.|.+...+ ...|.+++ +||+++.+++..+.|.
T Consensus 235 ~~~~vlD~f~GsGt~~~~a----~~~g~~~~---g~e~~~~~~~~a~~r~ 277 (297)
T 2zig_A 235 VGDVVLDPFAGTGTTLIAA----ARWGRRAL---GVELVPRYAQLAKERF 277 (297)
T ss_dssp TTCEEEETTCTTTHHHHHH----HHTTCEEE---EEESCHHHHHHHHHHH
T ss_pred CCCEEEECCCCCCHHHHHH----HHcCCeEE---EEeCCHHHHHHHHHHH
Confidence 4558999999999777665 66787764 9999999999888773
No 118
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=90.71 E-value=0.17 Score=52.87 Aligned_cols=43 Identities=16% Similarity=0.213 Sum_probs=35.1
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH 386 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~ 386 (718)
...+|||+.||.|.++.-| ...|.++ .|||+++.+++..+.|.
T Consensus 42 ~~~~VLDiG~G~G~lt~~L----a~~~~~v---~~vDi~~~~~~~a~~~~ 84 (299)
T 2h1r_A 42 SSDIVLEIGCGTGNLTVKL----LPLAKKV---ITIDIDSRMISEVKKRC 84 (299)
T ss_dssp TTCEEEEECCTTSTTHHHH----TTTSSEE---EEECSCHHHHHHHHHHH
T ss_pred CcCEEEEEcCcCcHHHHHH----HhcCCEE---EEEECCHHHHHHHHHHH
Confidence 4568999999999999888 3446565 49999999998888774
No 119
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=90.62 E-value=0.19 Score=51.20 Aligned_cols=54 Identities=26% Similarity=0.204 Sum_probs=41.4
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCC----CceeecCchH
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHP----ETEVRNESAE 397 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p----~~~v~~~~~~ 397 (718)
...+|||+.||.|.++.-| ...|.++ .+||+++.+++..+.|.. ...++..|+.
T Consensus 120 ~~~~vLD~GcG~G~~~~~l----~~~g~~v---~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~ 177 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYL----SLLGYDV---TSWDHNENSIAFLNETKEKENLNISTALYDIN 177 (286)
T ss_dssp CSCEEEEESCTTCHHHHHH----HHTTCEE---EEEESCHHHHHHHHHHHHHTTCCEEEEECCGG
T ss_pred CCCcEEEECCCCCHHHHHH----HHCCCeE---EEEECCHHHHHHHHHHHHHcCCceEEEEeccc
Confidence 5678999999999999887 4568875 499999999888777653 4555555553
No 120
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=90.29 E-value=2.5 Score=46.39 Aligned_cols=47 Identities=15% Similarity=0.034 Sum_probs=34.5
Q ss_pred ccccceeccccccchhhHhHhhhhhh-----------cCCeeEeEEeecccHHHHHHHHhh
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANL-----------AGLNLVTRWAVDINEYACQSLKLN 385 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~-----------aG~~~~~~~avd~~~~A~~t~~~N 385 (718)
....+|+|..||.||+...+..-+.. .+.. .+++|+|+.+....+.|
T Consensus 170 ~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~---i~G~Ei~~~~~~lA~~n 227 (445)
T 2okc_A 170 QMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKA---LHGVDNTPLVVTLASMN 227 (445)
T ss_dssp CTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTT---EEEEESCHHHHHHHHHH
T ss_pred CCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeE---EEEEeCCHHHHHHHHHH
Confidence 34568999999999998887533221 1233 36999999998888776
No 121
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=90.27 E-value=0.22 Score=48.33 Aligned_cols=54 Identities=19% Similarity=0.210 Sum_probs=44.1
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCC-CceeecCchH
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHP-ETEVRNESAE 397 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p-~~~v~~~~~~ 397 (718)
...++||+-||.|.++.-| ...|.++ .++|+++.+.+..+.+.+ +..+++.|+.
T Consensus 45 ~~~~vLDiGcG~G~~~~~l----~~~~~~v---~~vD~s~~~~~~a~~~~~~~~~~~~~d~~ 99 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKL----LLAGRTV---YGIEPSREMRMIAKEKLPKEFSITEGDFL 99 (220)
T ss_dssp CCSEEEEECCTTSHHHHHH----HHTTCEE---EEECSCHHHHHHHHHHSCTTCCEESCCSS
T ss_pred CCCeEEEeCCCCCHHHHHH----HhCCCeE---EEEeCCHHHHHHHHHhCCCceEEEeCChh
Confidence 5679999999999998888 4457766 499999999999999988 6667666554
No 122
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=90.26 E-value=0.34 Score=52.76 Aligned_cols=48 Identities=25% Similarity=0.213 Sum_probs=32.8
Q ss_pred cccceeccccccchhhHhHhhhhhh-c-C--------------------------------CeeEeEEeecccHHHHHHH
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANL-A-G--------------------------------LNLVTRWAVDINEYACQSL 382 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~-a-G--------------------------------~~~~~~~avd~~~~A~~t~ 382 (718)
....+||+|||.|.+..-..+-+.. + | ... .++++|+|+.|++..
T Consensus 201 ~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~-~V~GvDid~~al~~A 279 (393)
T 3k0b_A 201 PDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPL-NIIGGDIDARLIEIA 279 (393)
T ss_dssp TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCC-CEEEEESCHHHHHHH
T ss_pred CCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCc-eEEEEECCHHHHHHH
Confidence 4568999999999987665432111 0 1 011 136999999999988
Q ss_pred Hhh
Q 047980 383 KLN 385 (718)
Q Consensus 383 ~~N 385 (718)
+.|
T Consensus 280 r~N 282 (393)
T 3k0b_A 280 KQN 282 (393)
T ss_dssp HHH
T ss_pred HHH
Confidence 887
No 123
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=89.84 E-value=0.49 Score=46.87 Aligned_cols=59 Identities=12% Similarity=0.120 Sum_probs=43.8
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhh-----CCCceeecCchHHHH
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLN-----HPETEVRNESAEDFL 400 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N-----~p~~~v~~~~~~~~l 400 (718)
...++||+.||.|.++.-|.. ...+.++ .|||+++.+++..+.| .++..++..|+.+++
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~--~~p~~~v---~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l 97 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAK--DRPEQDF---LGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVL 97 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHH--HCTTSEE---EEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHH
T ss_pred CCCeEEEEeeeChHHHHHHHH--HCCCCeE---EEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHH
Confidence 456899999999999888732 2224454 5999999988776655 356788889987763
No 124
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=89.83 E-value=5.3 Score=41.03 Aligned_cols=46 Identities=20% Similarity=0.254 Sum_probs=35.2
Q ss_pred cccceeccccccchhhHhHhhhhhhcC-CeeEeEEeecccHHHHHHHHhhCCC
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAG-LNLVTRWAVDINEYACQSLKLNHPE 388 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG-~~~~~~~avd~~~~A~~t~~~N~p~ 388 (718)
...+||||-||.|+++.-+. +..+ .++ .+||+|+.+++..+.|++.
T Consensus 78 ~~~~VLdiG~G~G~~~~~l~---~~~~~~~v---~~vDid~~~i~~a~~~~~~ 124 (283)
T 2i7c_A 78 EPKNVLVVGGGDGGIIRELC---KYKSVENI---DICEIDETVIEVSKIYFKN 124 (283)
T ss_dssp SCCEEEEEECTTSHHHHHHT---TCTTCCEE---EEEESCHHHHHHHHHHCTT
T ss_pred CCCeEEEEeCCcCHHHHHHH---HcCCCCEE---EEEECCHHHHHHHHHHhHH
Confidence 34689999999999988773 2222 343 5999999999999988764
No 125
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=89.67 E-value=0.35 Score=48.19 Aligned_cols=58 Identities=21% Similarity=0.155 Sum_probs=43.2
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC-----CCceeecCchHHH
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH-----PETEVRNESAEDF 399 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~-----p~~~v~~~~~~~~ 399 (718)
...++||+.||.|.++.-|.. ...|.++ .+||+++.+++..+.|. ++..+++.|++++
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~--~~~~~~v---~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~ 132 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKI--CFPHLHV---TIVDSLNKRITFLEKLSEALQLENTTFCHDRAETF 132 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHH--HCTTCEE---EEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHH
T ss_pred CCCEEEEecCCCCHHHHHHHH--hCCCCEE---EEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHh
Confidence 456899999999988877732 1345554 49999998888777652 4677888888765
No 126
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=89.64 E-value=0.43 Score=49.17 Aligned_cols=59 Identities=15% Similarity=0.116 Sum_probs=44.6
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC---------CCceeecCchHHHH
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH---------PETEVRNESAEDFL 400 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~---------p~~~v~~~~~~~~l 400 (718)
...+||||.||.|+++.-+. +..|..-+ .+||+|+.+++..+.|+ |...++.+|+.+++
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~---~~~~~~~v--~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l 142 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREIL---KHPSVKKA--TLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHI 142 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHT---TCTTCSEE--EEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHH
T ss_pred CCCEEEEECCchHHHHHHHH---hCCCCceE--EEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHH
Confidence 35689999999999887762 33354333 59999999999988876 56788888887654
No 127
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=89.56 E-value=0.3 Score=48.32 Aligned_cols=57 Identities=14% Similarity=0.086 Sum_probs=45.3
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCC--CceeecCchHHH
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHP--ETEVRNESAEDF 399 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p--~~~v~~~~~~~~ 399 (718)
....+||||-||.|.++.-| ...|.++ .+||+++.+.+..+.+.+ +..++..|+.++
T Consensus 55 ~~~~~vLD~GcG~G~~~~~l----a~~~~~v---~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~ 113 (245)
T 3ggd_A 55 NPELPLIDFACGNGTQTKFL----SQFFPRV---IGLDVSKSALEIAAKENTAANISYRLLDGLVP 113 (245)
T ss_dssp CTTSCEEEETCTTSHHHHHH----HHHSSCE---EEEESCHHHHHHHHHHSCCTTEEEEECCTTCH
T ss_pred CCCCeEEEEcCCCCHHHHHH----HHhCCCE---EEEECCHHHHHHHHHhCcccCceEEECccccc
Confidence 45578999999999999888 4556655 499999999999988876 566777777654
No 128
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=89.33 E-value=0.23 Score=51.49 Aligned_cols=52 Identities=17% Similarity=0.147 Sum_probs=42.4
Q ss_pred ceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCCC--ceeecCchHH
Q 047980 340 KLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPE--TEVRNESAED 398 (718)
Q Consensus 340 ~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p~--~~v~~~~~~~ 398 (718)
+|||+-||.|.++.-| ...|.++ .|||+|+..++.++.|+++ ..+++.|+.+
T Consensus 49 ~VLEIG~G~G~lt~~L----~~~~~~V---~avEid~~~~~~l~~~~~~~~v~vi~~D~l~ 102 (271)
T 3fut_A 49 PVFEVGPGLGALTRAL----LEAGAEV---TAIEKDLRLRPVLEETLSGLPVRLVFQDALL 102 (271)
T ss_dssp CEEEECCTTSHHHHHH----HHTTCCE---EEEESCGGGHHHHHHHTTTSSEEEEESCGGG
T ss_pred eEEEEeCchHHHHHHH----HHcCCEE---EEEECCHHHHHHHHHhcCCCCEEEEECChhh
Confidence 9999999999999988 4556555 5999999999999998864 5677776643
No 129
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=89.21 E-value=0.23 Score=48.10 Aligned_cols=54 Identities=13% Similarity=0.015 Sum_probs=41.6
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCCC---ceeecCch
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPE---TEVRNESA 396 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p~---~~v~~~~~ 396 (718)
....+|||+-||.|.++.-| ...|.++ .+||+++.+.+..+.|... ..++..|+
T Consensus 50 ~~~~~vLDiGcG~G~~~~~l----~~~~~~v---~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~ 106 (216)
T 3ofk_A 50 GAVSNGLEIGCAAGAFTEKL----APHCKRL---TVIDVMPRAIGRACQRTKRWSHISWAATDI 106 (216)
T ss_dssp SSEEEEEEECCTTSHHHHHH----GGGEEEE---EEEESCHHHHHHHHHHTTTCSSEEEEECCT
T ss_pred CCCCcEEEEcCCCCHHHHHH----HHcCCEE---EEEECCHHHHHHHHHhcccCCCeEEEEcch
Confidence 45678999999999999888 4456554 5999999999999988753 45555554
No 130
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=89.15 E-value=0.38 Score=46.04 Aligned_cols=55 Identities=20% Similarity=0.204 Sum_probs=41.0
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCC---CceeecCch
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHP---ETEVRNESA 396 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p---~~~v~~~~~ 396 (718)
....+|||+-||.|.++.-| ...|..-+ .++|+++.+++..+.|.. ...++..|+
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l----~~~~~~~v--~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~ 98 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYEL----FLGGFPNV--TSVDYSSVVVAAMQACYAHVPQLRWETMDV 98 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHH----HHTTCCCE--EEEESCHHHHHHHHHHTTTCTTCEEEECCT
T ss_pred CCCCeEEEECCCCcHHHHHH----HHcCCCcE--EEEeCCHHHHHHHHHhcccCCCcEEEEcch
Confidence 44568999999999998877 45576322 599999999999988874 445554444
No 131
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=89.08 E-value=0.34 Score=47.01 Aligned_cols=52 Identities=29% Similarity=0.280 Sum_probs=40.0
Q ss_pred ccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC----CCceeecCch
Q 047980 338 DVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH----PETEVRNESA 396 (718)
Q Consensus 338 ~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~----p~~~v~~~~~ 396 (718)
..++|||.||.|.++.-| ...|.++ .++|+++.+++..+.|. ++..++..|+
T Consensus 39 ~~~vLDlG~G~G~~~~~l----~~~~~~v---~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~ 94 (227)
T 1ve3_A 39 RGKVLDLACGVGGFSFLL----EDYGFEV---VGVDISEDMIRKAREYAKSRESNVEFIVGDA 94 (227)
T ss_dssp CCEEEEETCTTSHHHHHH----HHTTCEE---EEEESCHHHHHHHHHHHHHTTCCCEEEECCT
T ss_pred CCeEEEEeccCCHHHHHH----HHcCCEE---EEEECCHHHHHHHHHHHHhcCCCceEEECch
Confidence 568999999999998777 4556654 59999999888777664 5666666555
No 132
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=89.07 E-value=0.6 Score=45.48 Aligned_cols=60 Identities=20% Similarity=0.169 Sum_probs=43.5
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC------CCceeecCchHHHH
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH------PETEVRNESAEDFL 400 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~------p~~~v~~~~~~~~l 400 (718)
...++||+.||.|..+.-|...+. .+.++ .+||+++.+++..+.|+ ....++..|+.+++
T Consensus 64 ~~~~vLdiG~G~G~~~~~la~~~~-~~~~v---~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 129 (225)
T 3tr6_A 64 QAKKVIDIGTFTGYSAIAMGLALP-KDGTL---ITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTL 129 (225)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCC-TTCEE---EEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHH
T ss_pred CCCEEEEeCCcchHHHHHHHHhCC-CCCEE---EEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHH
Confidence 456899999999999888732110 14554 59999999888877775 24778888886654
No 133
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=89.04 E-value=0.25 Score=50.39 Aligned_cols=54 Identities=20% Similarity=0.271 Sum_probs=41.4
Q ss_pred cccceeccccccchhhHhHhhhhhhcC-CeeEeEEeecccHHHHHHHHhhCC--CceeecCchHH
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAG-LNLVTRWAVDINEYACQSLKLNHP--ETEVRNESAED 398 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG-~~~~~~~avd~~~~A~~t~~~N~p--~~~v~~~~~~~ 398 (718)
...+|||+.||.|.++.-| ...| .++ .|||+|+.+++..+.| + +..+++.|+.+
T Consensus 31 ~~~~VLDiG~G~G~lt~~L----~~~~~~~v---~avEid~~~~~~~~~~-~~~~v~~i~~D~~~ 87 (249)
T 3ftd_A 31 EGNTVVEVGGGTGNLTKVL----LQHPLKKL---YVIELDREMVENLKSI-GDERLEVINEDASK 87 (249)
T ss_dssp TTCEEEEEESCHHHHHHHH----TTSCCSEE---EEECCCHHHHHHHTTS-CCTTEEEECSCTTT
T ss_pred CcCEEEEEcCchHHHHHHH----HHcCCCeE---EEEECCHHHHHHHHhc-cCCCeEEEEcchhh
Confidence 4568999999999999888 3445 444 5999999999999888 4 34666666643
No 134
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=88.91 E-value=0.49 Score=47.61 Aligned_cols=61 Identities=15% Similarity=0.103 Sum_probs=44.5
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC------CCceeecCchHHHH
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH------PETEVRNESAEDFL 400 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~------p~~~v~~~~~~~~l 400 (718)
....+|||+.||.|+.+.-|...+. .+.++ .+||+++.+++..+.|. +...++..|+.+++
T Consensus 62 ~~~~~VLdiG~G~G~~~~~la~~~~-~~~~v---~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l 128 (248)
T 3tfw_A 62 TQAKRILEIGTLGGYSTIWMARELP-ADGQL---LTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSL 128 (248)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTSC-TTCEE---EEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHH
T ss_pred cCCCEEEEecCCchHHHHHHHHhCC-CCCEE---EEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHH
Confidence 3457999999999999988732110 14555 59999999888877774 25778888887653
No 135
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=88.68 E-value=0.25 Score=50.45 Aligned_cols=45 Identities=18% Similarity=0.242 Sum_probs=35.4
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCC
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHP 387 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p 387 (718)
...-.|||+|||.|-..... .+.|-+++ +||+++.+++.-+.|..
T Consensus 211 ~~~~~vlD~f~GsGtt~~~a----~~~gr~~i---g~e~~~~~~~~~~~r~~ 255 (260)
T 1g60_A 211 NPNDLVLDCFMGSGTTAIVA----KKLGRNFI---GCDMNAEYVNQANFVLN 255 (260)
T ss_dssp CTTCEEEESSCTTCHHHHHH----HHTTCEEE---EEESCHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHH----HHcCCeEE---EEeCCHHHHHHHHHHHH
Confidence 34558999999999665444 67788775 99999999998887753
No 136
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=88.64 E-value=0.34 Score=47.41 Aligned_cols=55 Identities=15% Similarity=0.175 Sum_probs=44.8
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCCCceeecCchHH
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAED 398 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p~~~v~~~~~~~ 398 (718)
...++||+-||.|.++.-| ...|.++ .++|+++.+++..+.++++..+...|+.+
T Consensus 40 ~~~~vLdiG~G~G~~~~~l----~~~~~~v---~~~D~s~~~~~~a~~~~~~~~~~~~d~~~ 94 (239)
T 3bxo_A 40 EASSLLDVACGTGTHLEHF----TKEFGDT---AGLELSEDMLTHARKRLPDATLHQGDMRD 94 (239)
T ss_dssp TCCEEEEETCTTSHHHHHH----HHHHSEE---EEEESCHHHHHHHHHHCTTCEEEECCTTT
T ss_pred CCCeEEEecccCCHHHHHH----HHhCCcE---EEEeCCHHHHHHHHHhCCCCEEEECCHHH
Confidence 4568999999999999887 3445444 59999999999999999888888777754
No 137
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=88.47 E-value=0.73 Score=44.87 Aligned_cols=61 Identities=21% Similarity=0.179 Sum_probs=44.3
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCC------CceeecCchHHHH
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHP------ETEVRNESAEDFL 400 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p------~~~v~~~~~~~~l 400 (718)
....++||+.||.|+.+.-|...+. .|.++ .+||+++.+.+..+.|+. ...++..|+.+++
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~-~~~~v---~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 123 (223)
T 3duw_A 57 QGARNILEIGTLGGYSTIWLARGLS-SGGRV---VTLEASEKHADIARSNIERANLNDRVEVRTGLALDSL 123 (223)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCC-SSCEE---EEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHH
T ss_pred hCCCEEEEecCCccHHHHHHHHhCC-CCCEE---EEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHH
Confidence 3456899999999999988832110 15555 599999998888777652 3678888887654
No 138
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=88.36 E-value=0.43 Score=48.58 Aligned_cols=43 Identities=14% Similarity=0.150 Sum_probs=35.8
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH 386 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~ 386 (718)
...+|||+=||.|..+.-| ...|++|+ |||+++.+++..+.++
T Consensus 68 ~~~~vLD~GCG~G~~~~~L----a~~G~~V~---gvD~S~~~i~~a~~~~ 110 (252)
T 2gb4_A 68 SGLRVFFPLCGKAIEMKWF----ADRGHTVV---GVEISEIGIREFFAEQ 110 (252)
T ss_dssp CSCEEEETTCTTCTHHHHH----HHTTCEEE---EECSCHHHHHHHHHHT
T ss_pred CCCeEEEeCCCCcHHHHHH----HHCCCeEE---EEECCHHHHHHHHHhc
Confidence 4568999999999888777 56799764 9999999999886654
No 139
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=88.33 E-value=0.42 Score=46.80 Aligned_cols=54 Identities=15% Similarity=0.084 Sum_probs=41.0
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCC---CceeecCch
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHP---ETEVRNESA 396 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p---~~~v~~~~~ 396 (718)
....++||+.||.|.++.-| ...|.++ .++|+++.+++..+.|.. +..+...|+
T Consensus 69 ~~~~~vLdiG~G~G~~~~~l----~~~~~~v---~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~ 125 (231)
T 1vbf_A 69 HKGQKVLEIGTGIGYYTALI----AEIVDKV---VSVEINEKMYNYASKLLSYYNNIKLILGDG 125 (231)
T ss_dssp CTTCEEEEECCTTSHHHHHH----HHHSSEE---EEEESCHHHHHHHHHHHTTCSSEEEEESCG
T ss_pred CCCCEEEEEcCCCCHHHHHH----HHHcCEE---EEEeCCHHHHHHHHHHHhhcCCeEEEECCc
Confidence 34568999999999999887 3445444 599999999999988876 445555554
No 140
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=88.25 E-value=0.2 Score=52.52 Aligned_cols=55 Identities=15% Similarity=0.149 Sum_probs=43.7
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC---CCceeecCchHH
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH---PETEVRNESAED 398 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~---p~~~v~~~~~~~ 398 (718)
...+|||+-||.|.++..|. ..|.++ .|||+|+..++..+.|+ ++..+++.|+.+
T Consensus 50 ~~~~VLEIG~G~G~lT~~La----~~~~~V---~aVEid~~li~~a~~~~~~~~~v~vi~gD~l~ 107 (295)
T 3gru_A 50 KDDVVLEIGLGKGILTEELA----KNAKKV---YVIEIDKSLEPYANKLKELYNNIEIIWGDALK 107 (295)
T ss_dssp TTCEEEEECCTTSHHHHHHH----HHSSEE---EEEESCGGGHHHHHHHHHHCSSEEEEESCTTT
T ss_pred CcCEEEEECCCchHHHHHHH----hcCCEE---EEEECCHHHHHHHHHHhccCCCeEEEECchhh
Confidence 45689999999999999883 346565 49999999988888775 777888877743
No 141
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=88.11 E-value=0.52 Score=46.63 Aligned_cols=58 Identities=16% Similarity=0.148 Sum_probs=44.2
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC----CCceeecCchHHH
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH----PETEVRNESAEDF 399 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~----p~~~v~~~~~~~~ 399 (718)
....+|||+-||.|.++.-| ...+..-+ ++||+++.+.+..+.+. ++..++..|+.++
T Consensus 59 ~~~~~vLDiGcGtG~~~~~l----~~~~~~~v--~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~ 120 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAIAASKV----QEAPIDEH--WIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDV 120 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHH----HTSCEEEE--EEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHH
T ss_pred CCCCeEEEEeccCCHHHHHH----HhcCCCeE--EEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHh
Confidence 35678999999999988877 44455333 69999999988888776 4567777777664
No 142
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=87.92 E-value=0.46 Score=46.67 Aligned_cols=53 Identities=25% Similarity=0.246 Sum_probs=41.3
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC--CCceeecCch
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH--PETEVRNESA 396 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~--p~~~v~~~~~ 396 (718)
...+|||+-||.|.++.-| ...|.++ .+||+++.+++..+.+. ++..++..|+
T Consensus 53 ~~~~vLDiG~G~G~~~~~l----~~~~~~v---~~vD~s~~~~~~a~~~~~~~~~~~~~~d~ 107 (242)
T 3l8d_A 53 KEAEVLDVGCGDGYGTYKL----SRTGYKA---VGVDISEVMIQKGKERGEGPDLSFIKGDL 107 (242)
T ss_dssp TTCEEEEETCTTSHHHHHH----HHTTCEE---EEEESCHHHHHHHHTTTCBTTEEEEECBT
T ss_pred CCCeEEEEcCCCCHHHHHH----HHcCCeE---EEEECCHHHHHHHHhhcccCCceEEEcch
Confidence 4569999999999998877 4568775 49999999999998883 4555555544
No 143
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=87.87 E-value=0.37 Score=48.17 Aligned_cols=45 Identities=18% Similarity=0.207 Sum_probs=34.4
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH 386 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~ 386 (718)
...++|||+||.|+++.-|.. ...+.++ .+||+++.+++..+.|.
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~--~~~~~~v---~gvD~s~~~~~~a~~~~ 109 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGA--TLNGWYF---LATEVDDMCFNYAKKNV 109 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHH--HHHCCEE---EEEESCHHHHHHHHHHH
T ss_pred CCCEEEEeCCChhHHHHHHHH--hCCCCeE---EEEECCHHHHHHHHHHH
Confidence 456899999999998877732 1225555 59999999999888774
No 144
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=87.84 E-value=0.58 Score=47.38 Aligned_cols=59 Identities=20% Similarity=0.135 Sum_probs=43.9
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC-----CCceeecCchHHH
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH-----PETEVRNESAEDF 399 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~-----p~~~v~~~~~~~~ 399 (718)
....++||+.||.|..+.-|.. ...+.++ .+||+++.+++..+.|. .+..+++.|++++
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~--~~~~~~v---~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~ 142 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKI--VRPELEL---VLVDATRKKVAFVERAIEVLGLKGARALWGRAEVL 142 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHH--HCTTCEE---EEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHH
T ss_pred CCCCEEEEEcCCCCHHHHHHHH--HCCCCEE---EEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHh
Confidence 3456899999999988877631 1234554 59999999998888773 3577888888775
No 145
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=87.83 E-value=0.39 Score=46.23 Aligned_cols=54 Identities=19% Similarity=0.280 Sum_probs=39.1
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCC-----CceeecCch
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHP-----ETEVRNESA 396 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p-----~~~v~~~~~ 396 (718)
...++||+.||.|.++.-| ...|..-+ .++|+++.+++..+.|.. +..+...|+
T Consensus 60 ~~~~vLDiG~G~G~~~~~l----~~~~~~~v--~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~ 118 (205)
T 3grz_A 60 KPLTVADVGTGSGILAIAA----HKLGAKSV--LATDISDESMTAAEENAALNGIYDIALQKTSL 118 (205)
T ss_dssp SCCEEEEETCTTSHHHHHH----HHTTCSEE--EEEESCHHHHHHHHHHHHHTTCCCCEEEESST
T ss_pred CCCEEEEECCCCCHHHHHH----HHCCCCEE--EEEECCHHHHHHHHHHHHHcCCCceEEEeccc
Confidence 4578999999999988777 34565323 599999999888877743 255555544
No 146
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=87.80 E-value=1.2 Score=48.13 Aligned_cols=45 Identities=20% Similarity=0.115 Sum_probs=34.2
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhh
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLN 385 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N 385 (718)
+...+|||+|||.||=++-|. ..+-. ..++|+|+++..+..++.|
T Consensus 147 ~pg~~VLD~CAaPGGKT~~la----~~~~~-~~l~A~D~~~~R~~~l~~~ 191 (359)
T 4fzv_A 147 QPGDIVLDLCAAPGGKTLALL----QTGCC-RNLAANDLSPSRIARLQKI 191 (359)
T ss_dssp CTTEEEEESSCTTCHHHHHHH----HTTCE-EEEEEECSCHHHHHHHHHH
T ss_pred CCCCEEEEecCCccHHHHHHH----HhcCC-CcEEEEcCCHHHHHHHHHH
Confidence 455689999999999998773 22221 1236999999999988877
No 147
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=87.77 E-value=0.29 Score=48.99 Aligned_cols=48 Identities=23% Similarity=0.108 Sum_probs=35.2
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCC
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHP 387 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p 387 (718)
...++||++||.|.++.-+...+...+.++ .++|+++.+++..+.|..
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v---~gvDis~~~l~~A~~~~~ 98 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQV---IASDVDPAPLELAAKNLA 98 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEE---EEEESCHHHHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeE---EEEECCHHHHHHHHHHHH
Confidence 567999999999998887732110124444 699999999999887743
No 148
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=87.71 E-value=0.5 Score=43.80 Aligned_cols=53 Identities=19% Similarity=0.160 Sum_probs=42.3
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCCCceeecCc
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNES 395 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p~~~v~~~~ 395 (718)
....++||+-||.|.++.-| ...+.++ .++|+++.+.+..+.+.++..++..|
T Consensus 16 ~~~~~vLDiG~G~G~~~~~l----~~~~~~v---~~vD~s~~~~~~a~~~~~~v~~~~~d 68 (170)
T 3i9f_A 16 GKKGVIVDYGCGNGFYCKYL----LEFATKL---YCIDINVIALKEVKEKFDSVITLSDP 68 (170)
T ss_dssp SCCEEEEEETCTTCTTHHHH----HTTEEEE---EEECSCHHHHHHHHHHCTTSEEESSG
T ss_pred CCCCeEEEECCCCCHHHHHH----HhhcCeE---EEEeCCHHHHHHHHHhCCCcEEEeCC
Confidence 34568999999999998877 4444333 69999999999999998887777654
No 149
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=87.63 E-value=0.36 Score=47.00 Aligned_cols=42 Identities=17% Similarity=0.162 Sum_probs=35.0
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhh
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLN 385 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N 385 (718)
...++||+=||.|..+.-| ...|++|+ |||+++.+++..+.+
T Consensus 22 ~~~~vLD~GCG~G~~~~~l----a~~g~~V~---gvD~S~~~l~~a~~~ 63 (203)
T 1pjz_A 22 PGARVLVPLCGKSQDMSWL----SGQGYHVV---GAELSEAAVERYFTE 63 (203)
T ss_dssp TTCEEEETTTCCSHHHHHH----HHHCCEEE---EEEECHHHHHHHHHH
T ss_pred CCCEEEEeCCCCcHhHHHH----HHCCCeEE---EEeCCHHHHHHHHHH
Confidence 4568999999999998877 45588764 999999999988776
No 150
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=87.63 E-value=0.68 Score=50.02 Aligned_cols=58 Identities=19% Similarity=0.103 Sum_probs=44.9
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCC-------------CceeecCchHHHH
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHP-------------ETEVRNESAEDFL 400 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p-------------~~~v~~~~~~~~l 400 (718)
.+.+||+|++|.|++..-+ ...+..-+ .+||+|+.+++..+.|+| ...++.+|+.+|+
T Consensus 188 ~pkrVL~IGgG~G~~arel----lk~~~~~V--t~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L 258 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEI----VKLKPKMV--TMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVL 258 (364)
T ss_dssp TTCEEEEEECTTCHHHHHH----HTTCCSEE--EEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHH
T ss_pred CCCEEEEEECChhHHHHHH----HHCCCCEE--EEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHH
Confidence 4678999999999887655 23343323 599999999999999987 3578888987775
No 151
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=87.58 E-value=0.6 Score=44.97 Aligned_cols=54 Identities=11% Similarity=0.078 Sum_probs=40.2
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC-----CCceeecCch
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH-----PETEVRNESA 396 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~-----p~~~v~~~~~ 396 (718)
....++||+.||.|.++.-|. ..|.++ .++|+++.+++..+.|. ++..+...|+
T Consensus 76 ~~~~~vLdiG~G~G~~~~~la----~~~~~v---~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~ 134 (210)
T 3lbf_A 76 TPQSRVLEIGTGSGYQTAILA----HLVQHV---CSVERIKGLQWQARRRLKNLDLHNVSTRHGDG 134 (210)
T ss_dssp CTTCEEEEECCTTSHHHHHHH----HHSSEE---EEEESCHHHHHHHHHHHHHTTCCSEEEEESCG
T ss_pred CCCCEEEEEcCCCCHHHHHHH----HhCCEE---EEEecCHHHHHHHHHHHHHcCCCceEEEECCc
Confidence 456789999999999988773 336655 59999999988887764 3455655555
No 152
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=87.43 E-value=0.77 Score=47.30 Aligned_cols=58 Identities=16% Similarity=0.137 Sum_probs=43.1
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC---------------CCceeecCchHHHH
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH---------------PETEVRNESAEDFL 400 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~---------------p~~~v~~~~~~~~l 400 (718)
...+||||.||.|+++.-+. + .|..-+ .+||+|+.+++..+.|+ +...++..|+.+++
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~---~-~~~~~v--~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l 147 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVL---Q-HDVDEV--IMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFI 147 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHT---T-SCCSEE--EEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHH
T ss_pred CCCeEEEEcCCcCHHHHHHH---h-CCCCEE--EEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHh
Confidence 34689999999999988772 2 354333 59999999998888765 45677788876653
No 153
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=87.43 E-value=0.51 Score=46.81 Aligned_cols=55 Identities=18% Similarity=0.207 Sum_probs=41.6
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC----CCceeecCchHH
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH----PETEVRNESAED 398 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~----p~~~v~~~~~~~ 398 (718)
...+||||.||.|.++.-| ...|.++ .++|+++.+++..+.|. ....++..|+.+
T Consensus 41 ~~~~vLDlGcG~G~~~~~l----~~~~~~v---~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~ 99 (252)
T 1wzn_A 41 EVRRVLDLACGTGIPTLEL----AERGYEV---VGLDLHEEMLRVARRKAKERNLKIEFLQGDVLE 99 (252)
T ss_dssp CCCEEEEETCTTCHHHHHH----HHTTCEE---EEEESCHHHHHHHHHHHHHTTCCCEEEESCGGG
T ss_pred CCCEEEEeCCCCCHHHHHH----HHCCCeE---EEEECCHHHHHHHHHHHHhcCCceEEEECChhh
Confidence 4568999999999999887 4458765 49999999888877664 245666666643
No 154
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=87.42 E-value=0.69 Score=45.16 Aligned_cols=55 Identities=20% Similarity=0.058 Sum_probs=43.9
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCC-CceeecCchHH
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHP-ETEVRNESAED 398 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p-~~~v~~~~~~~ 398 (718)
...+|||+=||.|.++.-| ...|.++ .+||+++.+++..+.+.+ +..++..|+++
T Consensus 42 ~~~~vLDiGcG~G~~~~~l----~~~~~~v---~gvD~s~~~~~~a~~~~~~~v~~~~~d~~~ 97 (250)
T 2p7i_A 42 RPGNLLELGSFKGDFTSRL----QEHFNDI---TCVEASEEAISHAQGRLKDGITYIHSRFED 97 (250)
T ss_dssp CSSCEEEESCTTSHHHHHH----TTTCSCE---EEEESCHHHHHHHHHHSCSCEEEEESCGGG
T ss_pred CCCcEEEECCCCCHHHHHH----HHhCCcE---EEEeCCHHHHHHHHHhhhCCeEEEEccHHH
Confidence 4457999999999998877 4567665 499999999999999887 66676666644
No 155
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=87.39 E-value=0.42 Score=45.97 Aligned_cols=54 Identities=19% Similarity=0.136 Sum_probs=41.8
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC-CCceeecCchH
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH-PETEVRNESAE 397 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~-p~~~v~~~~~~ 397 (718)
...+|||+-||.|.++.-| ...|.+++ ++|+++.+.+..+.+. ++..++..|+.
T Consensus 46 ~~~~vLdiG~G~G~~~~~l----~~~~~~v~---~~D~s~~~~~~a~~~~~~~~~~~~~d~~ 100 (218)
T 3ou2_A 46 IRGDVLELASGTGYWTRHL----SGLADRVT---ALDGSAEMIAEAGRHGLDNVEFRQQDLF 100 (218)
T ss_dssp SCSEEEEESCTTSHHHHHH----HHHSSEEE---EEESCHHHHHHHGGGCCTTEEEEECCTT
T ss_pred CCCeEEEECCCCCHHHHHH----HhcCCeEE---EEeCCHHHHHHHHhcCCCCeEEEecccc
Confidence 3459999999999998877 44577664 9999999998888755 56677666653
No 156
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=87.19 E-value=0.57 Score=46.48 Aligned_cols=58 Identities=14% Similarity=0.050 Sum_probs=45.0
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCCCceeecCchHH
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAED 398 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p~~~v~~~~~~~ 398 (718)
....+|||+-||.|.++.-|.. ...|.++ .++|+++..++..+.+.++..+...|+++
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~--~~~~~~v---~~~D~s~~~~~~a~~~~~~~~~~~~d~~~ 89 (259)
T 2p35_A 32 ERVLNGYDLGCGPGNSTELLTD--RYGVNVI---TGIDSDDDMLEKAADRLPNTNFGKADLAT 89 (259)
T ss_dssp SCCSSEEEETCTTTHHHHHHHH--HHCTTSE---EEEESCHHHHHHHHHHSTTSEEEECCTTT
T ss_pred CCCCEEEEecCcCCHHHHHHHH--hCCCCEE---EEEECCHHHHHHHHHhCCCcEEEECChhh
Confidence 3456899999999999887732 1126665 49999999999999998888888777644
No 157
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=87.00 E-value=0.48 Score=48.17 Aligned_cols=55 Identities=16% Similarity=0.236 Sum_probs=42.8
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC------CCceeecCchHH
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH------PETEVRNESAED 398 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~------p~~~v~~~~~~~ 398 (718)
...+|||+-||.|.++.-| ...|.+++ +||+++.+.+..+.+. +...++..|+.+
T Consensus 68 ~~~~vLDiGcG~G~~~~~l----~~~~~~v~---gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 128 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKM----AERGHQVI---LCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQD 128 (285)
T ss_dssp SCCEEEEETCTTCHHHHHH----HHTTCEEE---EEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGG
T ss_pred CCCEEEEeCCcchHHHHHH----HHCCCEEE---EEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHH
Confidence 3679999999999998888 44587764 9999999998888775 445566666654
No 158
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=86.96 E-value=0.32 Score=50.52 Aligned_cols=55 Identities=16% Similarity=0.177 Sum_probs=43.1
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCe----eEeEEeecccHHHHHHHHhh-CCCceeecCchHH
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLN----LVTRWAVDINEYACQSLKLN-HPETEVRNESAED 398 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~----~~~~~avd~~~~A~~t~~~N-~p~~~v~~~~~~~ 398 (718)
...+|||+-||.|.++.-|. ..|.. + .|||+|+..++..+.| .++..+++.|+.+
T Consensus 42 ~~~~VLEIG~G~G~lt~~La----~~~~~~~~~V---~avDid~~~l~~a~~~~~~~v~~i~~D~~~ 101 (279)
T 3uzu_A 42 RGERMVEIGPGLGALTGPVI----ARLATPGSPL---HAVELDRDLIGRLEQRFGELLELHAGDALT 101 (279)
T ss_dssp TTCEEEEECCTTSTTHHHHH----HHHCBTTBCE---EEEECCHHHHHHHHHHHGGGEEEEESCGGG
T ss_pred CcCEEEEEccccHHHHHHHH----HhCCCcCCeE---EEEECCHHHHHHHHHhcCCCcEEEECChhc
Confidence 45689999999999999883 33433 4 4999999999999888 4567777777754
No 159
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=86.95 E-value=0.32 Score=50.35 Aligned_cols=53 Identities=15% Similarity=0.132 Sum_probs=40.4
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCC------CceeecCch
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHP------ETEVRNESA 396 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p------~~~v~~~~~ 396 (718)
...+|||+-||.|.++.-| ...|.++ .|||+|+.+++..+.|.. +..+++.|+
T Consensus 28 ~~~~VLDiG~G~G~lt~~L----~~~~~~v---~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~ 86 (285)
T 1zq9_A 28 PTDVVLEVGPGTGNMTVKL----LEKAKKV---VACELDPRLVAELHKRVQGTPVASKLQVLVGDV 86 (285)
T ss_dssp TTCEEEEECCTTSTTHHHH----HHHSSEE---EEEESCHHHHHHHHHHHTTSTTGGGEEEEESCT
T ss_pred CCCEEEEEcCcccHHHHHH----HhhCCEE---EEEECCHHHHHHHHHHHHhcCCCCceEEEEcce
Confidence 4568999999999999988 3446665 599999999998888753 345555554
No 160
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=86.95 E-value=0.52 Score=45.78 Aligned_cols=45 Identities=27% Similarity=0.336 Sum_probs=37.4
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCCC
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPE 388 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p~ 388 (718)
...+|||+-||.|.++.-| ...|.++ .++|+++.+++..+.+...
T Consensus 30 ~~~~vLdiG~G~G~~~~~l----~~~~~~v---~~vD~s~~~~~~a~~~~~~ 74 (235)
T 3sm3_A 30 EDDEILDIGCGSGKISLEL----ASKGYSV---TGIDINSEAIRLAETAARS 74 (235)
T ss_dssp TTCEEEEETCTTSHHHHHH----HHTTCEE---EEEESCHHHHHHHHHHTTC
T ss_pred CCCeEEEECCCCCHHHHHH----HhCCCeE---EEEECCHHHHHHHHHHHHh
Confidence 5668999999999998877 4457765 4999999999999988754
No 161
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=86.83 E-value=0.5 Score=48.19 Aligned_cols=47 Identities=19% Similarity=0.153 Sum_probs=34.7
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH 386 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~ 386 (718)
....+|||+.||.|+++.-|...+ ..+.++ .++|+++.+++..+.|.
T Consensus 109 ~~~~~VLD~G~G~G~~~~~la~~~-~~~~~v---~~vD~s~~~~~~a~~~~ 155 (275)
T 1yb2_A 109 RPGMDILEVGVGSGNMSSYILYAL-NGKGTL---TVVERDEDNLKKAMDNL 155 (275)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHH-TTSSEE---EEECSCHHHHHHHHHHH
T ss_pred CCcCEEEEecCCCCHHHHHHHHHc-CCCCEE---EEEECCHHHHHHHHHHH
Confidence 445689999999999998773210 115555 49999999998887774
No 162
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=86.82 E-value=0.58 Score=45.82 Aligned_cols=60 Identities=17% Similarity=0.189 Sum_probs=43.2
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCC------CceeecCchHHH
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHP------ETEVRNESAEDF 399 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p------~~~v~~~~~~~~ 399 (718)
....+||||.||.|..+.-|...+ ..|.++ .+||+++.+++..+.|.. ...++..|+.++
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~-~~~~~v---~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 122 (221)
T 3u81_A 57 YSPSLVLELGAYCGYSAVRMARLL-QPGARL---LTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDL 122 (221)
T ss_dssp HCCSEEEEECCTTSHHHHHHHTTS-CTTCEE---EEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHH
T ss_pred cCCCEEEEECCCCCHHHHHHHHhC-CCCCEE---EEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHH
Confidence 345689999999999998884321 125555 599999999888877642 366777777654
No 163
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=86.78 E-value=0.57 Score=44.32 Aligned_cols=54 Identities=24% Similarity=0.149 Sum_probs=39.7
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC-----CCceeecCchH
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH-----PETEVRNESAE 397 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~-----p~~~v~~~~~~ 397 (718)
...++||+-||.|.++.-| ...|.++ .++|+++.+.+..+.|. ++..+...|+.
T Consensus 32 ~~~~vLdiG~G~G~~~~~l----~~~~~~v---~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~ 90 (199)
T 2xvm_A 32 KPGKTLDLGCGNGRNSLYL----AANGYDV---DAWDKNAMSIANVERIKSIENLDNLHTRVVDLN 90 (199)
T ss_dssp CSCEEEEETCTTSHHHHHH----HHTTCEE---EEEESCHHHHHHHHHHHHHHTCTTEEEEECCGG
T ss_pred CCCeEEEEcCCCCHHHHHH----HHCCCeE---EEEECCHHHHHHHHHHHHhCCCCCcEEEEcchh
Confidence 3459999999999988777 4457765 49999999988877653 24555555553
No 164
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=86.77 E-value=0.6 Score=43.69 Aligned_cols=43 Identities=30% Similarity=0.244 Sum_probs=34.7
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH 386 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~ 386 (718)
...++||+.||.|.++.-+. ..|.++ .++|+++.+++..+.|.
T Consensus 52 ~~~~vLdiG~G~G~~~~~~~----~~~~~v---~~~D~~~~~~~~a~~~~ 94 (194)
T 1dus_A 52 KDDDILDLGCGYGVIGIALA----DEVKST---TMADINRRAIKLAKENI 94 (194)
T ss_dssp TTCEEEEETCTTSHHHHHHG----GGSSEE---EEEESCHHHHHHHHHHH
T ss_pred CCCeEEEeCCCCCHHHHHHH----HcCCeE---EEEECCHHHHHHHHHHH
Confidence 55689999999999988773 336665 49999999998888774
No 165
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=86.73 E-value=0.55 Score=48.34 Aligned_cols=47 Identities=9% Similarity=0.048 Sum_probs=38.9
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCCCc
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPET 389 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p~~ 389 (718)
....+||||.||.|.++.-| ...|.+| .|||+++.+++..+.|....
T Consensus 44 ~~g~~VLDlGcGtG~~a~~L----a~~g~~V---~gvD~S~~ml~~Ar~~~~~~ 90 (261)
T 3iv6_A 44 VPGSTVAVIGASTRFLIEKA----LERGASV---TVFDFSQRMCDDLAEALADR 90 (261)
T ss_dssp CTTCEEEEECTTCHHHHHHH----HHTTCEE---EEEESCHHHHHHHHHHTSSS
T ss_pred CCcCEEEEEeCcchHHHHHH----HhcCCEE---EEEECCHHHHHHHHHHHHhc
Confidence 34568999999999999888 4567765 49999999999999987653
No 166
>2b2y_C CHD-1, chromodomain-helicase-DNA-binding protein 1; three stranded antiparallel beta sheet, alpha helix linker, peptide binding protein; 2.35A {Homo sapiens} SCOP: b.34.13.2 PDB: 2b2u_C* 2b2v_C* 2b2t_C* 2b2w_C
Probab=86.68 E-value=0.18 Score=45.63 Aligned_cols=43 Identities=28% Similarity=0.630 Sum_probs=33.7
Q ss_pred hhHHHHHHHHhHhcCCch-----hhhcccceeeEeeccCCCCCCCCccccccc
Q 047980 451 SEIFEVEKILKICYGDPK-----EIKKRGLYLKVRWRNYGPSEDTWEPIEGLS 498 (718)
Q Consensus 451 ~~~~~v~~l~~i~~g~p~-----~~~~~~l~~~~~w~~~~~~~d~w~~~~~~~ 498 (718)
..+|.|+++ |||+ ...+..+.|-|.|+||...++||+|..+|.
T Consensus 34 ~~~Y~VE~i-----~Dp~~ildkR~~~g~~eYlVKWkG~s~~~nTWEp~enL~ 81 (115)
T 2b2y_C 34 TTIYAVEAD-----GDPNAGFEKNKEPGEIQYLIKWKGWSHIHNTWETEETLK 81 (115)
T ss_dssp GSHHHHHHH-----CBTTTTCCTTSSSCEEEEEEEETTSCGGGCEEECHHHHH
T ss_pred CceEEEeec-----CCcccccccceeCCcEEEEEEECCCCchhcccCCHHHcC
Confidence 457899987 2333 234567889999999999999999998875
No 167
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=86.67 E-value=0.64 Score=46.16 Aligned_cols=57 Identities=21% Similarity=0.155 Sum_probs=43.6
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCC--CceeecCchHH
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHP--ETEVRNESAED 398 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p--~~~v~~~~~~~ 398 (718)
....+||||-||.|.++.-| ...|..-+ .++|+++.+++..+.+.. ...+...|+.+
T Consensus 43 ~~~~~vLD~GcG~G~~~~~l----~~~~~~~v--~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~ 101 (253)
T 3g5l_A 43 FNQKTVLDLGCGFGWHCIYA----AEHGAKKV--LGIDLSERMLTEAKRKTTSPVVCYEQKAIED 101 (253)
T ss_dssp CTTCEEEEETCTTCHHHHHH----HHTTCSEE--EEEESCHHHHHHHHHHCCCTTEEEEECCGGG
T ss_pred cCCCEEEEECCCCCHHHHHH----HHcCCCEE--EEEECCHHHHHHHHHhhccCCeEEEEcchhh
Confidence 35679999999999988877 55676322 599999999999888864 56666666643
No 168
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=86.57 E-value=0.82 Score=44.64 Aligned_cols=60 Identities=18% Similarity=0.106 Sum_probs=43.4
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC------CCceeecCchHHHH
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH------PETEVRNESAEDFL 400 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~------p~~~v~~~~~~~~l 400 (718)
...++||+.||.|.++.-|...+. .+.++ .++|+++.+++..+.|+ +...++..|+.+++
T Consensus 69 ~~~~vLdiG~G~G~~~~~la~~~~-~~~~v---~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~ 134 (229)
T 2avd_A 69 QAKKALDLGTFTGYSALALALALP-ADGRV---VTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETL 134 (229)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSC-TTCEE---EEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHH
T ss_pred CCCEEEEEcCCccHHHHHHHHhCC-CCCEE---EEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHH
Confidence 456899999999999888843211 14454 59999999888877764 45678888886653
No 169
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=86.31 E-value=0.68 Score=45.95 Aligned_cols=55 Identities=18% Similarity=0.225 Sum_probs=42.2
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC----CCceeecCchH
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH----PETEVRNESAE 397 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~----p~~~v~~~~~~ 397 (718)
....+|||+-||.|.++.-| ...|.++ .++|+++.+++..+.+. ++..+...|++
T Consensus 38 ~~~~~vLDiG~G~G~~~~~l----~~~~~~v---~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~ 96 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRIALPL----IARGYRY---IALDADAAMLEVFRQKIAGVDRKVQVVQADAR 96 (263)
T ss_dssp SSCCEEEEETCTTSTTHHHH----HTTTCEE---EEEESCHHHHHHHHHHTTTSCTTEEEEESCTT
T ss_pred CCCCEEEEeCCcCCHHHHHH----HHCCCEE---EEEECCHHHHHHHHHHhhccCCceEEEEcccc
Confidence 34568999999999998887 3457665 49999999999888874 56666665553
No 170
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=86.20 E-value=0.67 Score=46.16 Aligned_cols=58 Identities=12% Similarity=-0.021 Sum_probs=40.4
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC-----CC-ceeecCchH
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH-----PE-TEVRNESAE 397 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~-----p~-~~v~~~~~~ 397 (718)
....++||+.||.|+++.-|...+ ..+.++ .++|+++.+++..+.|. ++ ..+...|+.
T Consensus 92 ~~~~~vldiG~G~G~~~~~l~~~~-~~~~~v---~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 155 (255)
T 3mb5_A 92 SPGDFIVEAGVGSGALTLFLANIV-GPEGRV---VSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIY 155 (255)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHH-CTTSEE---EEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGG
T ss_pred CCCCEEEEecCCchHHHHHHHHHh-CCCeEE---EEEecCHHHHHHHHHHHHHcCCCCceEEEECchh
Confidence 345689999999999998883210 114554 59999999988888774 33 566665553
No 171
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=86.06 E-value=0.66 Score=45.99 Aligned_cols=58 Identities=16% Similarity=0.095 Sum_probs=42.9
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC------CCceeecCchHHH
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH------PETEVRNESAEDF 399 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~------p~~~v~~~~~~~~ 399 (718)
...++||+.||.|.++.-|... ..+.++ .+||+++.+.+..+.|. +...++..|+.++
T Consensus 71 ~~~~vLDiG~G~G~~~~~la~~--~~~~~v---~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 134 (232)
T 3ntv_A 71 NVKNILEIGTAIGYSSMQFASI--SDDIHV---TTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQ 134 (232)
T ss_dssp TCCEEEEECCSSSHHHHHHHTT--CTTCEE---EEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGC
T ss_pred CCCEEEEEeCchhHHHHHHHHh--CCCCEE---EEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHH
Confidence 4568999999999999888421 124554 59999999888887775 2567777777554
No 172
>2epb_A Chromodomain-helicase-DNA-binding protein 6; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=85.97 E-value=0.035 Score=45.78 Aligned_cols=52 Identities=31% Similarity=0.454 Sum_probs=34.2
Q ss_pred HHHHHHHhHhcCCchhhhcccceeeEeeccCCCCCCCCcccccccccccchhhh
Q 047980 454 FEVEKILKICYGDPKEIKKRGLYLKVRWRNYGPSEDTWEPIEGLSNCGEKIKEF 507 (718)
Q Consensus 454 ~~v~~l~~i~~g~p~~~~~~~l~~~~~w~~~~~~~d~w~~~~~~~~~~~~i~e~ 507 (718)
+.|++|++.....-...+...+.+-|.|+|+..++.||++..++ +++.|.+|
T Consensus 12 ~~VErIl~~r~~~~~~~g~~~~eYLVKWkgl~y~e~TWE~~~~l--~~~~I~~f 63 (68)
T 2epb_A 12 VEVDRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDV--DPAKVKEF 63 (68)
T ss_dssp CCCCEEEEEEEEECSSSCCEEEEEEEECTTSCGGGCCEEETTTS--CHHHHHHH
T ss_pred eEEeEEEEEEecccccCCCcceEEEEEEcCCChhcCccccchhc--CHHHHHHH
Confidence 45677766321000001222567889999999999999999887 45777766
No 173
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=85.88 E-value=0.62 Score=47.83 Aligned_cols=44 Identities=30% Similarity=0.259 Sum_probs=34.7
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecc-cHHHHHHHHhhC
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDI-NEYACQSLKLNH 386 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~-~~~A~~t~~~N~ 386 (718)
...+||||.||.|.++.-+ ...|..-+ .++|+ ++.+++..+.|.
T Consensus 79 ~~~~vLDlG~G~G~~~~~~----a~~~~~~v--~~~D~s~~~~~~~a~~n~ 123 (281)
T 3bzb_A 79 AGKTVCELGAGAGLVSIVA----FLAGADQV--VATDYPDPEILNSLESNI 123 (281)
T ss_dssp TTCEEEETTCTTSHHHHHH----HHTTCSEE--EEEECSCHHHHHHHHHHH
T ss_pred CCCeEEEecccccHHHHHH----HHcCCCEE--EEEeCCCHHHHHHHHHHH
Confidence 3458999999999998776 44565223 59999 899999988884
No 174
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=85.62 E-value=0.56 Score=44.82 Aligned_cols=50 Identities=22% Similarity=0.141 Sum_probs=37.6
Q ss_pred ceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCC----CceeecCch
Q 047980 340 KLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHP----ETEVRNESA 396 (718)
Q Consensus 340 ~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p----~~~v~~~~~ 396 (718)
++||+-||.|.++.-| ...|.++ .++|+++.+++..+.+.. ...++..|+
T Consensus 32 ~vLdiGcG~G~~~~~l----~~~~~~v---~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~ 85 (202)
T 2kw5_A 32 KILCLAEGEGRNACFL----ASLGYEV---TAVDQSSVGLAKAKQLAQEKGVKITTVQSNL 85 (202)
T ss_dssp EEEECCCSCTHHHHHH----HTTTCEE---EEECSSHHHHHHHHHHHHHHTCCEEEECCBT
T ss_pred CEEEECCCCCHhHHHH----HhCCCeE---EEEECCHHHHHHHHHHHHhcCCceEEEEcCh
Confidence 9999999999998777 4557765 499999999887777642 444544444
No 175
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=85.50 E-value=0.97 Score=44.61 Aligned_cols=53 Identities=23% Similarity=0.201 Sum_probs=43.3
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCCCceeecCchHHH
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDF 399 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p~~~v~~~~~~~~ 399 (718)
...+|||+-||.|.++.-| ...|.++ .+||+++.+.+..+.+ ..+...|+.++
T Consensus 41 ~~~~vLDiGcG~G~~~~~l----~~~~~~v---~gvD~s~~~~~~a~~~---~~~~~~d~~~~ 93 (240)
T 3dli_A 41 GCRRVLDIGCGRGEFLELC----KEEGIES---IGVDINEDMIKFCEGK---FNVVKSDAIEY 93 (240)
T ss_dssp TCSCEEEETCTTTHHHHHH----HHHTCCE---EEECSCHHHHHHHHTT---SEEECSCHHHH
T ss_pred CCCeEEEEeCCCCHHHHHH----HhCCCcE---EEEECCHHHHHHHHhh---cceeeccHHHH
Confidence 4578999999999998776 4458776 4999999999988887 67777787765
No 176
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=85.48 E-value=0.58 Score=50.52 Aligned_cols=42 Identities=26% Similarity=0.256 Sum_probs=34.6
Q ss_pred ccceeccccccchhhHhHhhhhhhc--CCeeEeEEeecccHHHHHHHHhhC
Q 047980 338 DVKLLDLYSGCGAMSTGLCLGANLA--GLNLVTRWAVDINEYACQSLKLNH 386 (718)
Q Consensus 338 ~~~~lDLFsG~Gg~s~Gl~~g~~~a--G~~~~~~~avd~~~~A~~t~~~N~ 386 (718)
..+||||+||.|.++.-+. .. |.++ .+||+++.+++..+.|.
T Consensus 223 ~~~VLDlGcG~G~~s~~la----~~~p~~~V---~gvD~s~~al~~Ar~n~ 266 (375)
T 4dcm_A 223 EGEIVDLGCGNGVIGLTLL----DKNPQAKV---VFVDESPMAVASSRLNV 266 (375)
T ss_dssp CSEEEEETCTTCHHHHHHH----HHCTTCEE---EEEESCHHHHHHHHHHH
T ss_pred CCeEEEEeCcchHHHHHHH----HHCCCCEE---EEEECcHHHHHHHHHHH
Confidence 4789999999999998883 33 5555 59999999999988884
No 177
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=85.34 E-value=0.94 Score=43.81 Aligned_cols=59 Identities=8% Similarity=-0.016 Sum_probs=42.3
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCC------CceeecCchHHH
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHP------ETEVRNESAEDF 399 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p------~~~v~~~~~~~~ 399 (718)
...++||+.||.|..+.-|...+. .|.++ .+||+++.+++..+.|+. ...++..|+.++
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~-~~~~v---~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 120 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAIS-ISSRV---VMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGI 120 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSC-TTCEE---EEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHH
T ss_pred CCCEEEEEcCCccHHHHHHHHhCC-CCCEE---EEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHH
Confidence 456899999999999988843211 15554 599999999988887753 356667777554
No 178
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=85.33 E-value=0.62 Score=46.26 Aligned_cols=58 Identities=10% Similarity=0.043 Sum_probs=43.1
Q ss_pred ccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC-------CCceeecCchHHH
Q 047980 338 DVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH-------PETEVRNESAEDF 399 (718)
Q Consensus 338 ~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~-------p~~~v~~~~~~~~ 399 (718)
..++|||.||.|..+.-|..++. .|.++ .+||+++..++..+.|+ +...+++.|+.++
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~-~~~~v---~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~ 121 (221)
T 3dr5_A 57 STGAIAITPAAGLVGLYILNGLA-DNTTL---TCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDV 121 (221)
T ss_dssp CCEEEEESTTHHHHHHHHHHHSC-TTSEE---EEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHH
T ss_pred CCCEEEEcCCchHHHHHHHHhCC-CCCEE---EEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHH
Confidence 45899999999999988843321 24555 49999999988887775 2467778887665
No 179
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=85.21 E-value=1.1 Score=47.17 Aligned_cols=58 Identities=24% Similarity=0.272 Sum_probs=43.5
Q ss_pred cccceeccccccchhhHhHhhhhhhc-CCeeEeEEeecccHHHHHHHHhhCC---------CceeecCchHHHH
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLA-GLNLVTRWAVDINEYACQSLKLNHP---------ETEVRNESAEDFL 400 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~a-G~~~~~~~avd~~~~A~~t~~~N~p---------~~~v~~~~~~~~l 400 (718)
...+||||-||.|+++.-+. +.. +.++ .+||+|+.+.+..+.|++ ...++..|+.+++
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~---~~~~~~~v---~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l 183 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELC---KYKSVENI---DICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFL 183 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHT---TCTTCCEE---EEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHH
T ss_pred CCCEEEEEcCCccHHHHHHH---HcCCCCEE---EEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHH
Confidence 34689999999999988773 222 3343 599999999999988865 4667788876653
No 180
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=85.16 E-value=1.1 Score=43.86 Aligned_cols=54 Identities=15% Similarity=0.234 Sum_probs=41.6
Q ss_pred cccceeccccccchhhHhHhhhhhhcCC-eeEeEEeecccHHHHHHHHhhCCC--ceeecCchH
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGL-NLVTRWAVDINEYACQSLKLNHPE--TEVRNESAE 397 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~-~~~~~~avd~~~~A~~t~~~N~p~--~~v~~~~~~ 397 (718)
...+|||+-||.|.++.-| ...|. ++ .++|+++.+++..+.+... ..+...|+.
T Consensus 43 ~~~~vLdiG~G~G~~~~~l----~~~~~~~v---~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~ 99 (243)
T 3bkw_A 43 GGLRIVDLGCGFGWFCRWA----HEHGASYV---LGLDLSEKMLARARAAGPDTGITYERADLD 99 (243)
T ss_dssp TTCEEEEETCTTCHHHHHH----HHTTCSEE---EEEESCHHHHHHHHHTSCSSSEEEEECCGG
T ss_pred CCCEEEEEcCcCCHHHHHH----HHCCCCeE---EEEcCCHHHHHHHHHhcccCCceEEEcChh
Confidence 4568999999999998877 44576 54 5999999999999988764 455555553
No 181
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=85.13 E-value=0.87 Score=44.13 Aligned_cols=44 Identities=20% Similarity=0.114 Sum_probs=35.4
Q ss_pred cccceeccccccchhhHhHhhhhhhcC--CeeEeEEeecccHHHHHHHHhhCC
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAG--LNLVTRWAVDINEYACQSLKLNHP 387 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG--~~~~~~~avd~~~~A~~t~~~N~p 387 (718)
...++||+-||.|.++.-| ...| .++ .+||+++.+++..+.+.+
T Consensus 29 ~~~~vLDiGcG~G~~~~~l----~~~~~~~~v---~gvD~s~~~~~~a~~~~~ 74 (219)
T 3jwg_A 29 NAKKVIDLGCGEGNLLSLL----LKDKSFEQI---TGVDVSYSVLERAKDRLK 74 (219)
T ss_dssp TCCEEEEETCTTCHHHHHH----HTSTTCCEE---EEEESCHHHHHHHHHHHT
T ss_pred CCCEEEEecCCCCHHHHHH----HhcCCCCEE---EEEECCHHHHHHHHHHHH
Confidence 4568999999999998887 4444 344 599999999999888865
No 182
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=85.12 E-value=0.56 Score=45.94 Aligned_cols=55 Identities=11% Similarity=0.098 Sum_probs=38.0
Q ss_pred cccceeccccccchhhHhHhhhhhhcC--CeeEeEEeecccHHHHHHHHhhC---CCceeecCchH
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAG--LNLVTRWAVDINEYACQSLKLNH---PETEVRNESAE 397 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG--~~~~~~~avd~~~~A~~t~~~N~---p~~~v~~~~~~ 397 (718)
...++||++||.|.++.-|. ...| .++ .++|+++.+++..+.|. ++..++..|+.
T Consensus 73 ~~~~vLDlG~G~G~~~~~la---~~~~~~~~v---~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~ 132 (227)
T 1g8a_A 73 PGKSVLYLGIASGTTASHVS---DIVGWEGKI---FGIEFSPRVLRELVPIVEERRNIVPILGDAT 132 (227)
T ss_dssp TTCEEEEETTTSTTHHHHHH---HHHCTTSEE---EEEESCHHHHHHHHHHHSSCTTEEEEECCTT
T ss_pred CCCEEEEEeccCCHHHHHHH---HHhCCCeEE---EEEECCHHHHHHHHHHHhccCCCEEEEccCC
Confidence 44589999999999998873 2322 344 59999997776665543 55666655553
No 183
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=85.12 E-value=0.8 Score=45.43 Aligned_cols=56 Identities=16% Similarity=0.115 Sum_probs=42.3
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC---CCceeecCchH
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH---PETEVRNESAE 397 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~---p~~~v~~~~~~ 397 (718)
....+|||+-||.|.++.-|. +..|.++ .+||+++.+++..+.+. +...+...|+.
T Consensus 54 ~~~~~vLdiG~G~G~~~~~l~---~~~~~~v---~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~ 112 (266)
T 3ujc_A 54 NENSKVLDIGSGLGGGCMYIN---EKYGAHT---HGIDICSNIVNMANERVSGNNKIIFEANDIL 112 (266)
T ss_dssp CTTCEEEEETCTTSHHHHHHH---HHHCCEE---EEEESCHHHHHHHHHTCCSCTTEEEEECCTT
T ss_pred CCCCEEEEECCCCCHHHHHHH---HHcCCEE---EEEeCCHHHHHHHHHHhhcCCCeEEEECccc
Confidence 445699999999999998883 2226665 49999999999999887 45556555553
No 184
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=84.86 E-value=0.59 Score=44.86 Aligned_cols=54 Identities=13% Similarity=0.095 Sum_probs=38.3
Q ss_pred ccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC-----CCceeecCch
Q 047980 338 DVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH-----PETEVRNESA 396 (718)
Q Consensus 338 ~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~-----p~~~v~~~~~ 396 (718)
..++||+.||.|.++.-|.. ...+.++ .++|+++.+++..+.|. ++..+.+.|+
T Consensus 66 ~~~vLDiG~G~G~~~~~l~~--~~~~~~v---~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~ 124 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPLSI--VRPEAHF---TLLDSLGKRVRFLRQVQHELKLENIEPVQSRV 124 (207)
T ss_dssp SSEEEEETCTTTTTHHHHHH--HCTTSEE---EEEESCHHHHHHHHHHHHHTTCSSEEEEECCT
T ss_pred CCeEEEECCCCCHHHHHHHH--HCCCCEE---EEEeCCHHHHHHHHHHHHHcCCCCeEEEecch
Confidence 46899999999999888732 1125554 59999999998888763 2345555444
No 185
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=84.55 E-value=0.98 Score=43.74 Aligned_cols=44 Identities=16% Similarity=0.104 Sum_probs=35.4
Q ss_pred cccceeccccccchhhHhHhhhhhhcC--CeeEeEEeecccHHHHHHHHhhCC
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAG--LNLVTRWAVDINEYACQSLKLNHP 387 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG--~~~~~~~avd~~~~A~~t~~~N~p 387 (718)
...++||+-||.|.++.-| ...| .++ .+||+++.+++..+.|..
T Consensus 29 ~~~~vLDiGcG~G~~~~~l----~~~~~~~~v---~gvD~s~~~~~~a~~~~~ 74 (217)
T 3jwh_A 29 NARRVIDLGCGQGNLLKIL----LKDSFFEQI---TGVDVSYRSLEIAQERLD 74 (217)
T ss_dssp TCCEEEEETCTTCHHHHHH----HHCTTCSEE---EEEESCHHHHHHHHHHHT
T ss_pred CCCEEEEeCCCCCHHHHHH----HhhCCCCEE---EEEECCHHHHHHHHHHHH
Confidence 4569999999999999887 3444 343 599999999999988865
No 186
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=84.35 E-value=0.42 Score=46.35 Aligned_cols=50 Identities=10% Similarity=0.087 Sum_probs=36.2
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCCCceeecCchHH
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAED 398 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p~~~v~~~~~~~ 398 (718)
+...+||||.||.|+++.-+. ..+..+ .|||+++.+ ..++..++..|+.+
T Consensus 24 ~~g~~VLDlG~G~G~~s~~la----~~~~~V---~gvD~~~~~------~~~~v~~~~~D~~~ 73 (191)
T 3dou_A 24 RKGDAVIEIGSSPGGWTQVLN----SLARKI---ISIDLQEME------EIAGVRFIRCDIFK 73 (191)
T ss_dssp CTTCEEEEESCTTCHHHHHHT----TTCSEE---EEEESSCCC------CCTTCEEEECCTTS
T ss_pred CCCCEEEEEeecCCHHHHHHH----HcCCcE---EEEeccccc------cCCCeEEEEccccC
Confidence 446799999999999998773 335555 499999752 34577777776643
No 187
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=84.28 E-value=1 Score=44.48 Aligned_cols=54 Identities=17% Similarity=0.126 Sum_probs=38.0
Q ss_pred cccceeccccccchhhHhHhhhhhhcC-CeeEeEEeecccHHHHHHHHhhC---CCceeecCch
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAG-LNLVTRWAVDINEYACQSLKLNH---PETEVRNESA 396 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG-~~~~~~~avd~~~~A~~t~~~N~---p~~~v~~~~~ 396 (718)
...+||||.||.|.++.-|. ...| .++ .+||+++.+++..+.|. ++..++..|+
T Consensus 74 ~~~~VLDlGcG~G~~~~~la---~~~~~~~v---~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~ 131 (230)
T 1fbn_A 74 RDSKILYLGASAGTTPSHVA---DIADKGIV---YAIEYAPRIMRELLDACAERENIIPILGDA 131 (230)
T ss_dssp TTCEEEEESCCSSHHHHHHH---HHTTTSEE---EEEESCHHHHHHHHHHTTTCTTEEEEECCT
T ss_pred CCCEEEEEcccCCHHHHHHH---HHcCCcEE---EEEECCHHHHHHHHHHhhcCCCeEEEECCC
Confidence 45689999999999988773 3334 333 69999999998877664 3444444444
No 188
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=84.25 E-value=0.92 Score=43.59 Aligned_cols=51 Identities=20% Similarity=0.112 Sum_probs=40.4
Q ss_pred cccceeccccccchhhHhHhhhhhhcCC-eeEeEEeecccHHHHHHHHhhCCCceeecCchH
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGL-NLVTRWAVDINEYACQSLKLNHPETEVRNESAE 397 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~-~~~~~~avd~~~~A~~t~~~N~p~~~v~~~~~~ 397 (718)
...++||+-||.|.++.-| |+ ++ .++|+++.+++..+.+.++..+...|+.
T Consensus 36 ~~~~vLdiG~G~G~~~~~l-------~~~~v---~~vD~s~~~~~~a~~~~~~~~~~~~d~~ 87 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL-------PYPQK---VGVEPSEAMLAVGRRRAPEATWVRAWGE 87 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC-------CCSEE---EEECCCHHHHHHHHHHCTTSEEECCCTT
T ss_pred CCCeEEEECCCCCHhHHhC-------CCCeE---EEEeCCHHHHHHHHHhCCCcEEEEcccc
Confidence 5668999999999877543 66 44 5999999999999999877777766653
No 189
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=84.25 E-value=0.79 Score=47.03 Aligned_cols=59 Identities=12% Similarity=0.101 Sum_probs=43.3
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhh-------CCCceeecCchHH
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLN-------HPETEVRNESAED 398 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N-------~p~~~v~~~~~~~ 398 (718)
....+|||+-||.|.++.-|...+ ..+.++ .+||+++.+++..+.+ .++..++..|+++
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~-~~~~~v---~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~ 100 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQEL-KPFEQI---IGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDD 100 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHS-SCCSEE---EEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTC
T ss_pred CCCCEEEEECCCCCHHHHHHHHhC-CCCCEE---EEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHh
Confidence 356799999999999998883100 245554 4999999988887776 5677777766644
No 190
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=84.23 E-value=1 Score=45.61 Aligned_cols=56 Identities=18% Similarity=0.255 Sum_probs=45.3
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCCCceeecCchHH
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAED 398 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p~~~v~~~~~~~ 398 (718)
....+|||+-||.|.++.-| ...|.++ .++|+++..++..+.+.++..+...|+++
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l----~~~~~~v---~gvD~s~~~~~~a~~~~~~~~~~~~d~~~ 111 (279)
T 3ccf_A 56 QPGEFILDLGCGTGQLTEKI----AQSGAEV---LGTDNAATMIEKARQNYPHLHFDVADARN 111 (279)
T ss_dssp CTTCEEEEETCTTSHHHHHH----HHTTCEE---EEEESCHHHHHHHHHHCTTSCEEECCTTT
T ss_pred CCCCEEEEecCCCCHHHHHH----HhCCCeE---EEEECCHHHHHHHHhhCCCCEEEECChhh
Confidence 34568999999999998887 3367665 49999999999999988888887777654
No 191
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=84.16 E-value=0.79 Score=42.56 Aligned_cols=45 Identities=18% Similarity=0.175 Sum_probs=34.4
Q ss_pred ccccceeccccccchhhHhHhhhhhh-cCCeeEeEEeecccHHHHHHHHhhC
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANL-AGLNLVTRWAVDINEYACQSLKLNH 386 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~-aG~~~~~~~avd~~~~A~~t~~~N~ 386 (718)
....++||+.||.|.++.-+. .. .+.++ .++|+++.+++..+.|.
T Consensus 24 ~~~~~vldiG~G~G~~~~~l~---~~~~~~~v---~~vD~~~~~~~~a~~~~ 69 (178)
T 3hm2_A 24 KPHETLWDIGGGSGSIAIEWL---RSTPQTTA---VCFEISEERRERILSNA 69 (178)
T ss_dssp CTTEEEEEESTTTTHHHHHHH---TTSSSEEE---EEECSCHHHHHHHHHHH
T ss_pred cCCCeEEEeCCCCCHHHHHHH---HHCCCCeE---EEEeCCHHHHHHHHHHH
Confidence 345689999999999988773 22 24444 59999999998888774
No 192
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=83.82 E-value=1 Score=44.69 Aligned_cols=55 Identities=9% Similarity=0.027 Sum_probs=39.3
Q ss_pred ccccceeccccccchhhHhHhhhhhhc--CCeeEeEEeecccHHHHHHHHhhC------CCceeecCch
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLA--GLNLVTRWAVDINEYACQSLKLNH------PETEVRNESA 396 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~a--G~~~~~~~avd~~~~A~~t~~~N~------p~~~v~~~~~ 396 (718)
....++||+.||.|.++.-|. +.. +.++ .++|+++.+++..+.|. +...+...|+
T Consensus 95 ~~~~~vLdiG~G~G~~~~~l~---~~~~~~~~v---~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~ 157 (258)
T 2pwy_A 95 APGMRVLEAGTGSGGLTLFLA---RAVGEKGLV---ESYEARPHHLAQAERNVRAFWQVENVRFHLGKL 157 (258)
T ss_dssp CTTCEEEEECCTTSHHHHHHH---HHHCTTSEE---EEEESCHHHHHHHHHHHHHHCCCCCEEEEESCG
T ss_pred CCCCEEEEECCCcCHHHHHHH---HHhCCCCEE---EEEeCCHHHHHHHHHHHHHhcCCCCEEEEECch
Confidence 345689999999999998773 221 4554 59999999988887773 3455555554
No 193
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=83.70 E-value=0.61 Score=47.17 Aligned_cols=44 Identities=25% Similarity=0.319 Sum_probs=35.3
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH 386 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~ 386 (718)
....+|||+.||.|.++..+ ...|.++ .++|+++.+++..+.|.
T Consensus 119 ~~~~~VLDiGcG~G~l~~~l----a~~g~~v---~gvDi~~~~v~~a~~n~ 162 (254)
T 2nxc_A 119 RPGDKVLDLGTGSGVLAIAA----EKLGGKA---LGVDIDPMVLPQAEANA 162 (254)
T ss_dssp CTTCEEEEETCTTSHHHHHH----HHTTCEE---EEEESCGGGHHHHHHHH
T ss_pred CCCCEEEEecCCCcHHHHHH----HHhCCeE---EEEECCHHHHHHHHHHH
Confidence 34568999999999988776 4567644 59999999998888774
No 194
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=83.62 E-value=1.5 Score=45.70 Aligned_cols=59 Identities=19% Similarity=0.195 Sum_probs=44.2
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC---------CCceeecCchHHHH
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH---------PETEVRNESAEDFL 400 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~---------p~~~v~~~~~~~~l 400 (718)
...+||||-||.|+++.-+. +..+..-+ .+||+|+.+++..+.++ +...++..|+.+++
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~---~~~~~~~v--~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~ 162 (304)
T 3bwc_A 95 KPERVLIIGGGDGGVLREVL---RHGTVEHC--DLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFV 162 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHH---TCTTCCEE--EEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHH
T ss_pred CCCeEEEEcCCCCHHHHHHH---hCCCCCEE--EEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHH
Confidence 45689999999999988773 22233222 59999999998888776 56788888887653
No 195
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=83.55 E-value=0.51 Score=48.44 Aligned_cols=52 Identities=13% Similarity=0.199 Sum_probs=40.4
Q ss_pred cceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCCC--------ceeecCchH
Q 047980 339 VKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPE--------TEVRNESAE 397 (718)
Q Consensus 339 ~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p~--------~~v~~~~~~ 397 (718)
.+||||-||.|.++.-| ...|.++ .+||+++.+++..+.+.+. ..++..|+.
T Consensus 84 ~~vLDlGcG~G~~~~~l----~~~~~~v---~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~ 143 (299)
T 3g2m_A 84 GPVLELAAGMGRLTFPF----LDLGWEV---TALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMS 143 (299)
T ss_dssp SCEEEETCTTTTTHHHH----HTTTCCE---EEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTT
T ss_pred CcEEEEeccCCHHHHHH----HHcCCeE---EEEECCHHHHHHHHHHHhhcccccccceEEEeCchh
Confidence 38999999999999888 4568776 4999999999988887643 455555553
No 196
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=83.50 E-value=0.97 Score=44.71 Aligned_cols=55 Identities=15% Similarity=0.178 Sum_probs=40.3
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC-----CCceeecCchH
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH-----PETEVRNESAE 397 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~-----p~~~v~~~~~~ 397 (718)
....+|||+-||.|.++.-| ...|.++ .++|+++.+++..+.+. ++..+...|++
T Consensus 20 ~~~~~vLDiGcG~G~~~~~l----~~~~~~v---~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~ 79 (239)
T 1xxl_A 20 RAEHRVLDIGAGAGHTALAF----SPYVQEC---IGVDATKEMVEVASSFAQEKGVENVRFQQGTAE 79 (239)
T ss_dssp CTTCEEEEESCTTSHHHHHH----GGGSSEE---EEEESCHHHHHHHHHHHHHHTCCSEEEEECBTT
T ss_pred CCCCEEEEEccCcCHHHHHH----HHhCCEE---EEEECCHHHHHHHHHHHHHcCCCCeEEEecccc
Confidence 45668999999999988877 4455554 59999999888777653 45566555553
No 197
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=83.30 E-value=0.6 Score=50.65 Aligned_cols=50 Identities=24% Similarity=0.280 Sum_probs=34.5
Q ss_pred ccccceeccccccchhhHhHhhhhhh-c-C------------C--------------------eeEeEEeecccHHHHHH
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANL-A-G------------L--------------------NLVTRWAVDINEYACQS 381 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~-a-G------------~--------------------~~~~~~avd~~~~A~~t 381 (718)
....++||+|||.|++..-+.+-+.. + | + .. .++++|+|+.|++.
T Consensus 194 ~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~-~V~GvDid~~ai~~ 272 (385)
T 3ldu_A 194 KAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKF-KIYGYDIDEESIDI 272 (385)
T ss_dssp CTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCC-CEEEEESCHHHHHH
T ss_pred CCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCc-eEEEEECCHHHHHH
Confidence 34578999999999988766432211 0 0 0 11 23699999999999
Q ss_pred HHhhC
Q 047980 382 LKLNH 386 (718)
Q Consensus 382 ~~~N~ 386 (718)
-+.|.
T Consensus 273 Ar~Na 277 (385)
T 3ldu_A 273 ARENA 277 (385)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88883
No 198
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=83.27 E-value=0.091 Score=52.93 Aligned_cols=54 Identities=7% Similarity=0.086 Sum_probs=39.7
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC---CCceeecCchH
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH---PETEVRNESAE 397 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~---p~~~v~~~~~~ 397 (718)
...+|||+.||.|+++.-| ...|.++ .|||+++.+++..+.|. ++..+++.|+.
T Consensus 29 ~~~~VLDiG~G~G~~~~~l----~~~~~~v---~~id~~~~~~~~a~~~~~~~~~v~~~~~D~~ 85 (245)
T 1yub_A 29 ETDTVYEIGTGKGHLTTKL----AKISKQV---TSIELDSHLFNLSSEKLKLNTRVTLIHQDIL 85 (245)
T ss_dssp SSEEEEECSCCCSSCSHHH----HHHSSEE---EESSSSCSSSSSSSCTTTTCSEEEECCSCCT
T ss_pred CCCEEEEEeCCCCHHHHHH----HHhCCeE---EEEECCHHHHHHHHHHhccCCceEEEECChh
Confidence 4568999999999999888 3446554 59999998887777665 34555555553
No 199
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=83.03 E-value=1.1 Score=45.43 Aligned_cols=42 Identities=21% Similarity=0.174 Sum_probs=34.7
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhh
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLN 385 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N 385 (718)
...+||||-||.|.++.-| ...|.++ .+||+++.+.+..+.|
T Consensus 57 ~~~~vLDiGcG~G~~~~~l----~~~~~~v---~gvD~s~~~l~~a~~~ 98 (293)
T 3thr_A 57 GCHRVLDVACGTGVDSIML----VEEGFSV---TSVDASDKMLKYALKE 98 (293)
T ss_dssp TCCEEEETTCTTSHHHHHH----HHTTCEE---EEEESCHHHHHHHHHH
T ss_pred CCCEEEEecCCCCHHHHHH----HHCCCeE---EEEECCHHHHHHHHHh
Confidence 4568999999999998887 4568765 4999999998887765
No 200
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=82.98 E-value=0.88 Score=47.07 Aligned_cols=55 Identities=15% Similarity=0.007 Sum_probs=39.9
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCC------CceeecCch
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHP------ETEVRNESA 396 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p------~~~v~~~~~ 396 (718)
....+|||+.||.|.++.-|. +..|.++ .+||+++.+++..+.|.. ...++..|+
T Consensus 116 ~~~~~vLDiGcG~G~~~~~la---~~~~~~v---~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~ 176 (312)
T 3vc1_A 116 GPDDTLVDAGCGRGGSMVMAH---RRFGSRV---EGVTLSAAQADFGNRRARELRIDDHVRSRVCNM 176 (312)
T ss_dssp CTTCEEEEESCTTSHHHHHHH---HHHCCEE---EEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT
T ss_pred CCCCEEEEecCCCCHHHHHHH---HHcCCEE---EEEeCCHHHHHHHHHHHHHcCCCCceEEEECCh
Confidence 445689999999999998873 2227765 499999998887776632 355555554
No 201
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=82.83 E-value=0.89 Score=45.66 Aligned_cols=56 Identities=13% Similarity=0.017 Sum_probs=40.6
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC------CCceeecCchH
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH------PETEVRNESAE 397 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~------p~~~v~~~~~~ 397 (718)
....+|||+-||.|.++.-|. +..+.++ .+||+++.+++..+.+. +...++..|+.
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la---~~~~~~v---~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 106 (267)
T 3kkz_A 45 TEKSLIADIGCGTGGQTMVLA---GHVTGQV---TGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMD 106 (267)
T ss_dssp CTTCEEEEETCTTCHHHHHHH---TTCSSEE---EEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTT
T ss_pred CCCCEEEEeCCCCCHHHHHHH---hccCCEE---EEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChh
Confidence 456799999999999998873 2223354 49999999888877774 34566665553
No 202
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=82.76 E-value=1 Score=44.37 Aligned_cols=43 Identities=19% Similarity=0.340 Sum_probs=34.0
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH 386 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~ 386 (718)
...++||+.||.|.++.-+. + .+.++ .++|+++.+.+..+.|.
T Consensus 91 ~~~~vldiG~G~G~~~~~l~---~-~~~~v---~~vD~~~~~~~~a~~~~ 133 (248)
T 2yvl_A 91 KEKRVLEFGTGSGALLAVLS---E-VAGEV---WTFEAVEEFYKTAQKNL 133 (248)
T ss_dssp TTCEEEEECCTTSHHHHHHH---H-HSSEE---EEECSCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCccHHHHHHH---H-hCCEE---EEEecCHHHHHHHHHHH
Confidence 44589999999999888773 2 26555 59999999998888774
No 203
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=82.65 E-value=1.7 Score=45.45 Aligned_cols=58 Identities=16% Similarity=0.121 Sum_probs=43.2
Q ss_pred cccceeccccccchhhHhHhhhhhhcC-CeeEeEEeecccHHHHHHHHhhC---------CCceeecCchHHHH
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAG-LNLVTRWAVDINEYACQSLKLNH---------PETEVRNESAEDFL 400 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG-~~~~~~~avd~~~~A~~t~~~N~---------p~~~v~~~~~~~~l 400 (718)
...+||||.||.|+++.-+. +..+ .++ .+||+|+..++..+.|+ +...++..|+.+++
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~---~~~~~~~v---~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l 162 (304)
T 2o07_A 95 NPRKVLIIGGGDGGVLREVV---KHPSVESV---VQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFM 162 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHT---TCTTCCEE---EEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHH
T ss_pred CCCEEEEECCCchHHHHHHH---HcCCCCEE---EEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHH
Confidence 34689999999999988773 2222 333 59999999998888775 45778888887654
No 204
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=82.50 E-value=1.1 Score=44.12 Aligned_cols=54 Identities=19% Similarity=0.198 Sum_probs=36.6
Q ss_pred cccceeccccccchhhHhHhhhhhhcC--CeeEeEEeecccHHHHHH----HHhhCCCceeecCchH
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAG--LNLVTRWAVDINEYACQS----LKLNHPETEVRNESAE 397 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG--~~~~~~~avd~~~~A~~t----~~~N~p~~~v~~~~~~ 397 (718)
...++|||.||.|+++.-|. +..| .++ .+||+++.+++. .+.| ++..++..|+.
T Consensus 77 ~~~~vLDlG~G~G~~~~~la---~~~g~~~~v---~gvD~s~~~i~~~~~~a~~~-~~v~~~~~d~~ 136 (233)
T 2ipx_A 77 PGAKVLYLGAASGTTVSHVS---DIVGPDGLV---YAVEFSHRSGRDLINLAKKR-TNIIPVIEDAR 136 (233)
T ss_dssp TTCEEEEECCTTSHHHHHHH---HHHCTTCEE---EEECCCHHHHHHHHHHHHHC-TTEEEECSCTT
T ss_pred CCCEEEEEcccCCHHHHHHH---HHhCCCcEE---EEEECCHHHHHHHHHHhhcc-CCeEEEEcccC
Confidence 35689999999999998884 3322 444 599999775443 3333 56666666654
No 205
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=82.43 E-value=1.3 Score=43.59 Aligned_cols=58 Identities=9% Similarity=0.125 Sum_probs=41.9
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC------CCceeecCchHHH
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH------PETEVRNESAEDF 399 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~------p~~~v~~~~~~~~ 399 (718)
...+|||+.||.|.++.-|.... .|.++ .++|+++.+++..+.|+ +...++..|+.++
T Consensus 54 ~~~~vLdiG~G~G~~~~~la~~~--~~~~v---~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 117 (233)
T 2gpy_A 54 APARILEIGTAIGYSAIRMAQAL--PEATI---VSIERDERRYEEAHKHVKALGLESRIELLFGDALQL 117 (233)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHC--TTCEE---EEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGS
T ss_pred CCCEEEEecCCCcHHHHHHHHHC--CCCEE---EEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHH
Confidence 45689999999999988774221 14555 59999999988888774 2466677776553
No 206
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=81.91 E-value=0.57 Score=45.52 Aligned_cols=56 Identities=18% Similarity=0.141 Sum_probs=37.1
Q ss_pred ccccceeccccccchhhHhHhhhhhhc-CCeeEeEEeecccHHHHHHH----H-----hhCCCceeecCchH
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLA-GLNLVTRWAVDINEYACQSL----K-----LNHPETEVRNESAE 397 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~a-G~~~~~~~avd~~~~A~~t~----~-----~N~p~~~v~~~~~~ 397 (718)
....+|||+-||.|.++.-|. +.. |.++ .+||+++.+.+.+ + ...++..++..|+.
T Consensus 26 ~~~~~vLDiGcG~G~~~~~la---~~~p~~~v---~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~ 91 (218)
T 3mq2_A 26 QYDDVVLDVGTGDGKHPYKVA---RQNPSRLV---VALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAE 91 (218)
T ss_dssp TSSEEEEEESCTTCHHHHHHH---HHCTTEEE---EEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCST
T ss_pred cCCCEEEEecCCCCHHHHHHH---HHCCCCEE---EEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchh
Confidence 456789999999999998883 222 5555 5999999855532 1 22345566655553
No 207
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=81.61 E-value=0.71 Score=47.46 Aligned_cols=57 Identities=21% Similarity=0.221 Sum_probs=42.0
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCC------CceeecCchHH
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHP------ETEVRNESAED 398 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p------~~~v~~~~~~~ 398 (718)
....+|||+-||.|+++.-|. +..|.++ .+||+++.+.+..+.+.+ ...+...|+.+
T Consensus 71 ~~~~~vLDiGcG~G~~~~~la---~~~~~~v---~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 133 (302)
T 3hem_A 71 EPGMTLLDIGCGWGSTMRHAV---AEYDVNV---IGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEE 133 (302)
T ss_dssp CTTCEEEEETCTTSHHHHHHH---HHHCCEE---EEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGG
T ss_pred CCcCEEEEeeccCcHHHHHHH---HhCCCEE---EEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHH
Confidence 445689999999999998873 3337665 499999998888777643 35566666644
No 208
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=81.54 E-value=1.6 Score=44.08 Aligned_cols=55 Identities=11% Similarity=0.087 Sum_probs=39.0
Q ss_pred ccccceeccccccchhhHhHhhhhhhc--CCeeEeEEeecccHHHHHHHHhhC--------CCceeecCch
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLA--GLNLVTRWAVDINEYACQSLKLNH--------PETEVRNESA 396 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~a--G~~~~~~~avd~~~~A~~t~~~N~--------p~~~v~~~~~ 396 (718)
....+|||+.||.|.++.-|. +.. +.++ .++|+++.+++..+.|. ++..+.+.|+
T Consensus 98 ~~~~~vLdiG~G~G~~~~~l~---~~~~~~~~v---~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~ 162 (280)
T 1i9g_A 98 FPGARVLEAGAGSGALTLSLL---RAVGPAGQV---ISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDL 162 (280)
T ss_dssp CTTCEEEEECCTTSHHHHHHH---HHHCTTSEE---EEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCG
T ss_pred CCCCEEEEEcccccHHHHHHH---HHhCCCCEE---EEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECch
Confidence 345589999999999998773 222 4454 59999999988877763 3455555554
No 209
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=81.29 E-value=1.2 Score=43.92 Aligned_cols=45 Identities=27% Similarity=0.134 Sum_probs=35.8
Q ss_pred cccceeccccccchhhHhHhhhhhhcCC-eeEeEEeecccHHHHHHHHhhCCC
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGL-NLVTRWAVDINEYACQSLKLNHPE 388 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~-~~~~~~avd~~~~A~~t~~~N~p~ 388 (718)
...+|||+-||.|.++.-| ...+. ++ .+||+++.+++..+.+.+.
T Consensus 79 ~~~~vLDiGcG~G~~~~~l----~~~~~~~v---~~vD~s~~~~~~a~~~~~~ 124 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRL----LLPLFREV---DMVDITEDFLVQAKTYLGE 124 (241)
T ss_dssp CCSEEEEETCTTTHHHHHT----TTTTCSEE---EEEESCHHHHHHHHHHTGG
T ss_pred CCCEEEEECCCCCHHHHHH----HHhcCCEE---EEEeCCHHHHHHHHHHhhh
Confidence 4679999999999988877 33443 33 5999999999999888754
No 210
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=81.29 E-value=0.99 Score=45.65 Aligned_cols=46 Identities=26% Similarity=0.343 Sum_probs=35.8
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCC-eeEeEEeecccHHHHHHHHhhCCC
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGL-NLVTRWAVDINEYACQSLKLNHPE 388 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~-~~~~~~avd~~~~A~~t~~~N~p~ 388 (718)
....+|||+-||.|.++.-| ...|. ++ .+||+++.+++..+.+.+.
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l----~~~~~~~v---~gvD~s~~~~~~a~~~~~~ 109 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKY----ERAGIGEY---YGVDIAEVSINDARVRARN 109 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHH----HHHTCSEE---EEEESCHHHHHHHHHHHHT
T ss_pred CCCCeEEEECCCCCHHHHHH----HHCCCCEE---EEEECCHHHHHHHHHHHHh
Confidence 34568999999999988777 34465 44 5999999999888887643
No 211
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=81.24 E-value=1.4 Score=44.48 Aligned_cols=60 Identities=15% Similarity=0.038 Sum_probs=43.8
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCC------CceeecCchHHHH
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHP------ETEVRNESAEDFL 400 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p------~~~v~~~~~~~~l 400 (718)
...++||+.||.|..+.-|...+. .|.++ .+||+++.+.+..+.|+. ...++..|+.+++
T Consensus 79 ~~~~VLeiG~G~G~~~~~la~~~~-~~~~v---~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l 144 (247)
T 1sui_A 79 NAKNTMEIGVYTGYSLLATALAIP-EDGKI---LAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVL 144 (247)
T ss_dssp TCCEEEEECCGGGHHHHHHHHHSC-TTCEE---EEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHH
T ss_pred CcCEEEEeCCCcCHHHHHHHHhCC-CCCEE---EEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHH
Confidence 345899999999999988843221 15555 499999998888777752 4567788887654
No 212
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=81.08 E-value=1.5 Score=43.85 Aligned_cols=52 Identities=23% Similarity=0.214 Sum_probs=40.1
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCCCceeecCch
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESA 396 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p~~~v~~~~~ 396 (718)
...+|||+-||.|.++.-| ...|.++ .+||+++.+++..+.+... .+...|+
T Consensus 54 ~~~~vLDiGcG~G~~~~~l----~~~~~~v---~gvD~s~~~l~~a~~~~~~-~~~~~d~ 105 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFL----QERGFEV---VLVDPSKEMLEVAREKGVK-NVVEAKA 105 (260)
T ss_dssp SCCEEEEETCTTCHHHHHH----HTTTCEE---EEEESCHHHHHHHHHHTCS-CEEECCT
T ss_pred CCCeEEEeCCCcCHHHHHH----HHcCCeE---EEEeCCHHHHHHHHhhcCC-CEEECcH
Confidence 4568999999999998877 4557765 4999999999998888763 2444444
No 213
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=80.73 E-value=0.99 Score=43.55 Aligned_cols=54 Identities=20% Similarity=0.180 Sum_probs=38.8
Q ss_pred ccccceeccccccchhhHhHhhhhhhcC---CeeEeEEeecccHHHHHHHHhhC-----CCceeecCch
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAG---LNLVTRWAVDINEYACQSLKLNH-----PETEVRNESA 396 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG---~~~~~~~avd~~~~A~~t~~~N~-----p~~~v~~~~~ 396 (718)
....+|||+-||.|.++.-|. ..+ .++ .++|+++.+++..+.+. ++..+...|+
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~----~~~~~~~~v---~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~ 97 (219)
T 3dh0_A 36 KEGMTVLDVGTGAGFYLPYLS----KMVGEKGKV---YAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEE 97 (219)
T ss_dssp CTTCEEEESSCTTCTTHHHHH----HHHTTTCEE---EEEESCHHHHHHHHHHHHHHTCTTEEEEECBT
T ss_pred CCCCEEEEEecCCCHHHHHHH----HHhCCCcEE---EEEECCHHHHHHHHHHHHHcCCCcEEEEeccc
Confidence 345689999999999988873 332 444 59999999988877764 3455555444
No 214
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=80.62 E-value=1 Score=43.03 Aligned_cols=51 Identities=20% Similarity=0.259 Sum_probs=37.8
Q ss_pred ceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC------CCceeecCch
Q 047980 340 KLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH------PETEVRNESA 396 (718)
Q Consensus 340 ~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~------p~~~v~~~~~ 396 (718)
++||+-||.|.++.-|. +..|.++ .++|+++.+++..+.|. +...+...|+
T Consensus 46 ~vLdiG~G~G~~~~~l~---~~~~~~v---~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~ 102 (219)
T 3dlc_A 46 TCIDIGSGPGALSIALA---KQSDFSI---RALDFSKHMNEIALKNIADANLNDRIQIVQGDV 102 (219)
T ss_dssp EEEEETCTTSHHHHHHH---HHSEEEE---EEEESCHHHHHHHHHHHHHTTCTTTEEEEECBT
T ss_pred EEEEECCCCCHHHHHHH---HcCCCeE---EEEECCHHHHHHHHHHHHhccccCceEEEEcCH
Confidence 99999999999988873 2235554 59999999988888773 3455555544
No 215
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=80.57 E-value=1.2 Score=43.98 Aligned_cols=56 Identities=14% Similarity=0.004 Sum_probs=40.9
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCC---CceeecCchH
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHP---ETEVRNESAE 397 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p---~~~v~~~~~~ 397 (718)
....+|||+-||.|.++.-| ...|..-+ .+||+++.+++..+.+.. ...+...|+.
T Consensus 92 ~~~~~vLDiG~G~G~~~~~l----~~~~~~~v--~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~ 150 (254)
T 1xtp_A 92 HGTSRALDCGAGIGRITKNL----LTKLYATT--DLLEPVKHMLEEAKRELAGMPVGKFILASME 150 (254)
T ss_dssp CCCSEEEEETCTTTHHHHHT----HHHHCSEE--EEEESCHHHHHHHHHHTTTSSEEEEEESCGG
T ss_pred cCCCEEEEECCCcCHHHHHH----HHhhcCEE--EEEeCCHHHHHHHHHHhccCCceEEEEccHH
Confidence 45679999999999998877 33443323 599999999999988874 4455555443
No 216
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=80.45 E-value=2.2 Score=45.13 Aligned_cols=59 Identities=10% Similarity=0.058 Sum_probs=45.6
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCC-----CceeecCchHHHH
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHP-----ETEVRNESAEDFL 400 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p-----~~~v~~~~~~~~l 400 (718)
++++||||=||.|++..-+.. ...+.++ .+||+|+..++..+.+++ ...++..|+.+|+
T Consensus 89 ~~~rVLdIG~G~G~la~~la~--~~p~~~v---~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l 152 (317)
T 3gjy_A 89 SKLRITHLGGGACTMARYFAD--VYPQSRN---TVVELDAELARLSREWFDIPRAPRVKIRVDDARMVA 152 (317)
T ss_dssp GGCEEEEESCGGGHHHHHHHH--HSTTCEE---EEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHH
T ss_pred CCCEEEEEECCcCHHHHHHHH--HCCCcEE---EEEECCHHHHHHHHHhccccCCCceEEEECcHHHHH
Confidence 457999999999988877731 1246665 499999999999998875 4678888887764
No 217
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=80.41 E-value=2.3 Score=45.14 Aligned_cols=58 Identities=17% Similarity=0.169 Sum_probs=43.7
Q ss_pred cccceeccccccchhhHhHhhhhhhcC-CeeEeEEeecccHHHHHHHHhhC---------CCceeecCchHHHH
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAG-LNLVTRWAVDINEYACQSLKLNH---------PETEVRNESAEDFL 400 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG-~~~~~~~avd~~~~A~~t~~~N~---------p~~~v~~~~~~~~l 400 (718)
...+||||-||.|+++.-|. +..+ .++ .+||+++.+++..+.|+ +...++..|+.+++
T Consensus 120 ~~~~VLdIG~G~G~~a~~la---~~~~~~~V---~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l 187 (334)
T 1xj5_A 120 NPKKVLVIGGGDGGVLREVA---RHASIEQI---DMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFL 187 (334)
T ss_dssp CCCEEEEETCSSSHHHHHHT---TCTTCCEE---EEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHH
T ss_pred CCCEEEEECCCccHHHHHHH---HcCCCCEE---EEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHH
Confidence 34689999999999988773 2222 343 59999999999888776 45778888886653
No 218
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=80.34 E-value=1.4 Score=44.93 Aligned_cols=60 Identities=13% Similarity=0.154 Sum_probs=41.9
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCC------CceeecCchHH
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHP------ETEVRNESAED 398 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p------~~~v~~~~~~~ 398 (718)
+...+||||=||.|.++.-|..-+...|++++ |||+++..++..+.+.. ...+++.|+.+
T Consensus 69 ~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~---gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~ 134 (261)
T 4gek_A 69 QPGTQVYDLGCSLGAATLSVRRNIHHDNCKII---AIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRD 134 (261)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTCCSSSCEEE---EEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTT
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEE---EEECCHHHHHHHHHHHHhhccCceEEEeeccccc
Confidence 34568999999999999888433233577764 99999998887776532 34555555543
No 219
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=80.32 E-value=1.9 Score=42.03 Aligned_cols=44 Identities=14% Similarity=0.072 Sum_probs=33.2
Q ss_pred ccccceeccccccchhhHhHhhhhhhcC------CeeEeEEeecccHHHHHHHHhh
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAG------LNLVTRWAVDINEYACQSLKLN 385 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG------~~~~~~~avd~~~~A~~t~~~N 385 (718)
....+|||+.||.|.++.-|. +..| .++ .++|+++.+++..+.|
T Consensus 79 ~~~~~VLdiG~G~G~~~~~la---~~~~~~~~~~~~v---~~vD~~~~~~~~a~~~ 128 (227)
T 2pbf_A 79 KPGSRAIDVGSGSGYLTVCMA---IKMNVLENKNSYV---IGLERVKDLVNFSLEN 128 (227)
T ss_dssp CTTCEEEEESCTTSHHHHHHH---HHTTTTTCTTCEE---EEEESCHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCHHHHHHH---HHhcccCCCCCEE---EEEeCCHHHHHHHHHH
Confidence 345689999999999888773 2223 244 5999999988877776
No 220
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=80.27 E-value=2.3 Score=44.50 Aligned_cols=58 Identities=19% Similarity=0.149 Sum_probs=43.0
Q ss_pred cccceeccccccchhhHhHhhhhhhc-CCeeEeEEeecccHHHHHHHHhhC----------CCceeecCchHHHH
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLA-GLNLVTRWAVDINEYACQSLKLNH----------PETEVRNESAEDFL 400 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~a-G~~~~~~~avd~~~~A~~t~~~N~----------p~~~v~~~~~~~~l 400 (718)
...+||||-||.|+++.-+. +.. +.++ .+||+|+.+++..+.|+ |...++..|+.+++
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~---~~~~~~~v---~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l 145 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVL---KHPTVEKA---VMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYL 145 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHT---TSTTCCEE---EEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHH
T ss_pred CCCeEEEEcCCcCHHHHHHH---hcCCCCEE---EEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHH
Confidence 34689999999999887773 222 3343 59999999988877664 45778888887763
No 221
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=80.03 E-value=1.6 Score=48.25 Aligned_cols=59 Identities=15% Similarity=0.142 Sum_probs=43.4
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhh--------------CCCceeecCchHHH
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLN--------------HPETEVRNESAEDF 399 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N--------------~p~~~v~~~~~~~~ 399 (718)
....++|||-||.|.+..-+. ...|..-+ ++||+++.+++.-+.| .+...++++|+.++
T Consensus 172 ~~gd~VLDLGCGtG~l~l~lA---~~~g~~kV--vGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~l 244 (438)
T 3uwp_A 172 TDDDLFVDLGSGVGQVVLQVA---AATNCKHH--YGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSE 244 (438)
T ss_dssp CTTCEEEEESCTTSHHHHHHH---HHCCCSEE--EEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSH
T ss_pred CCCCEEEEeCCCCCHHHHHHH---HHCCCCEE--EEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccCC
Confidence 455689999999999998773 34676523 6999999877766543 25677888887664
No 222
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=79.76 E-value=1.6 Score=49.69 Aligned_cols=58 Identities=22% Similarity=0.310 Sum_probs=45.7
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC---C--CceeecCchHHHH
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH---P--ETEVRNESAEDFL 400 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~---p--~~~v~~~~~~~~l 400 (718)
.++++|||+=||.|-+|..| .+.|.+|. +||+.+.+++.-+... + +...++.+++++.
T Consensus 65 ~~~~~vLDvGCG~G~~~~~l----a~~ga~V~---giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~ 127 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSL----ASKGATIV---GIDFQQENINVCRALAEENPDFAAEFRVGRIEEVI 127 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHH----HHTTCEEE---EEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHH
T ss_pred CCCCeEEEECCCCcHHHHHH----HhCCCEEE---EECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHh
Confidence 46789999999999999888 67899864 9999999887655432 2 4567788888763
No 223
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=79.70 E-value=0.98 Score=47.10 Aligned_cols=58 Identities=16% Similarity=0.165 Sum_probs=41.0
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCC----------CceeecCchHHH
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHP----------ETEVRNESAEDF 399 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p----------~~~v~~~~~~~~ 399 (718)
...+||||-||.|+++.-+. +..+..-+ .+||+|+.+++..+.|++ ...++.+|+.++
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~---~~~~~~~V--~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~ 150 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVT---RHKNVESI--TMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNF 150 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHH---TCTTCCEE--EEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC-
T ss_pred CCCEEEEEeCChhHHHHHHH---hCCCCCEE--EEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHH
Confidence 35689999999999988773 33343333 599999999988887753 456666666444
No 224
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=79.14 E-value=2 Score=43.03 Aligned_cols=56 Identities=14% Similarity=0.263 Sum_probs=43.5
Q ss_pred ccccceeccccccchhhHhHhhhhhh-cCCeeEeEEeecccHHHHHHHHhhCCCceeecCchH
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANL-AGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAE 397 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~-aG~~~~~~~avd~~~~A~~t~~~N~p~~~v~~~~~~ 397 (718)
....++||+-||.|.++.-|. +. .|.++ .++|+++.+.+..+.+.++..+...|+.
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~---~~~~~~~v---~~vD~s~~~~~~a~~~~~~~~~~~~d~~ 140 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFA---DALPEITT---FGLDVSKVAIKAAAKRYPQVTFCVASSH 140 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHH---HTCTTSEE---EEEESCHHHHHHHHHHCTTSEEEECCTT
T ss_pred CCCCEEEEECCCCCHHHHHHH---HhCCCCeE---EEEeCCHHHHHHHHHhCCCcEEEEcchh
Confidence 356689999999998887773 22 26665 4999999999999999888777766553
No 225
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=79.00 E-value=0.82 Score=45.32 Aligned_cols=54 Identities=17% Similarity=0.119 Sum_probs=38.4
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCCC------ceeecCch
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPE------TEVRNESA 396 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p~------~~v~~~~~ 396 (718)
...+|||+-||.|.++.-|. +..+.++ .+||+++.+++..+.|... ..++..|+
T Consensus 46 ~~~~vLDiG~G~G~~~~~l~---~~~~~~v---~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~ 105 (257)
T 3f4k_A 46 DDAKIADIGCGTGGQTLFLA---DYVKGQI---TGIDLFPDFIEIFNENAVKANCADRVKGITGSM 105 (257)
T ss_dssp TTCEEEEETCTTSHHHHHHH---HHCCSEE---EEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT
T ss_pred CCCeEEEeCCCCCHHHHHHH---HhCCCeE---EEEECCHHHHHHHHHHHHHcCCCCceEEEECCh
Confidence 44689999999999988873 2223344 5999999999887777432 45555544
No 226
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=78.83 E-value=1.9 Score=43.27 Aligned_cols=58 Identities=17% Similarity=0.162 Sum_probs=41.4
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC-----CCceeecCchHH
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH-----PETEVRNESAED 398 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~-----p~~~v~~~~~~~ 398 (718)
....+|||+-||.|.++.-|.. ...|.++ .+||+++.+++..+.+. ++..++..|+.+
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~--~~~~~~v---~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~ 98 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGAQTVILAK--NNPDAEI---TSIDISPESLEKARENTEKNGIKNVKFLQANIFS 98 (276)
T ss_dssp CTTCEEEETTCTTSHHHHHHHH--HCTTSEE---EEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGG
T ss_pred CCCCeEEEecCCCCHHHHHHHH--hCCCCEE---EEEECCHHHHHHHHHHHHHcCCCCcEEEEccccc
Confidence 4567999999999999988732 1125555 49999999888777763 456666666543
No 227
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=78.81 E-value=2.5 Score=41.83 Aligned_cols=59 Identities=15% Similarity=0.023 Sum_probs=42.4
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC------CCceeecCchHHH
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH------PETEVRNESAEDF 399 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~------p~~~v~~~~~~~~ 399 (718)
...++||+-||.|.++.-|...+. .+.++ .++|+++.+++..+.|+ +...++..|+.++
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~-~~~~v---~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~ 136 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLP-PDGQI---IACDQDPNATAIAKKYWQKAGVAEKISLRLGPALAT 136 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSC-TTCEE---EEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHH
T ss_pred CCCEEEEecCCCCHHHHHHHHhCC-CCCEE---EEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHH
Confidence 345899999999999888743211 14454 59999999988877765 2466777887664
No 228
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=78.50 E-value=1.1 Score=48.65 Aligned_cols=48 Identities=17% Similarity=0.200 Sum_probs=33.2
Q ss_pred cccceeccccccchhhHhHhhhhhh--cC--------------------------------CeeEeEEeecccHHHHHHH
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANL--AG--------------------------------LNLVTRWAVDINEYACQSL 382 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~--aG--------------------------------~~~~~~~avd~~~~A~~t~ 382 (718)
....+||+|||.|++..-..+-+.. .| ... .++++|+|+.|++..
T Consensus 194 ~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~-~v~GvDid~~al~~A 272 (384)
T 3ldg_A 194 PDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQL-DISGFDFDGRMVEIA 272 (384)
T ss_dssp TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCC-CEEEEESCHHHHHHH
T ss_pred CCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCc-eEEEEECCHHHHHHH
Confidence 4578999999999887655332111 00 111 236999999999999
Q ss_pred Hhh
Q 047980 383 KLN 385 (718)
Q Consensus 383 ~~N 385 (718)
+.|
T Consensus 273 r~N 275 (384)
T 3ldg_A 273 RKN 275 (384)
T ss_dssp HHH
T ss_pred HHH
Confidence 888
No 229
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=78.47 E-value=2.3 Score=42.31 Aligned_cols=60 Identities=13% Similarity=-0.088 Sum_probs=44.0
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCC------CceeecCchHHHH
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHP------ETEVRNESAEDFL 400 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p------~~~v~~~~~~~~l 400 (718)
...++||+-||.|+.+.-|..++. .+.++ .+||+++...+..+.|+. ...++..|+.+++
T Consensus 70 ~~~~VLeiG~G~G~~~~~la~~~~-~~~~v---~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l 135 (237)
T 3c3y_A 70 NAKKTIEVGVFTGYSLLLTALSIP-DDGKI---TAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLAL 135 (237)
T ss_dssp TCCEEEEECCTTSHHHHHHHHHSC-TTCEE---EEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHH
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCC-CCCEE---EEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHH
Confidence 455899999999999988843221 14555 499999999888887752 3567788886654
No 230
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=78.30 E-value=1.2 Score=47.90 Aligned_cols=57 Identities=25% Similarity=0.247 Sum_probs=39.3
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhh----C--CCceeecCchHHH
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLN----H--PETEVRNESAEDF 399 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N----~--p~~~v~~~~~~~~ 399 (718)
....+||||.||.|.++.-+ ..+|..-+ .|||++ .+++..+.| . ....++..|++++
T Consensus 62 ~~~~~VLDlGcGtG~ls~~l----a~~g~~~V--~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 124 (376)
T 3r0q_C 62 FEGKTVLDVGTGSGILAIWS----AQAGARKV--YAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDI 124 (376)
T ss_dssp TTTCEEEEESCTTTHHHHHH----HHTTCSEE--EEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGC
T ss_pred CCCCEEEEeccCcCHHHHHH----HhcCCCEE--EEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhc
Confidence 44578999999999998877 55677333 599999 555544444 2 2267777777653
No 231
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=78.13 E-value=0.6 Score=46.98 Aligned_cols=60 Identities=22% Similarity=0.131 Sum_probs=42.4
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC------CCceeecCchHHHH
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH------PETEVRNESAEDFL 400 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~------p~~~v~~~~~~~~l 400 (718)
...++||+.||.|..+.-|...+. .|.++ .+||+++.+.+..+.|. +...++..|+.+++
T Consensus 60 ~~~~VLDiG~G~G~~t~~la~~~~-~~~~v---~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l 125 (242)
T 3r3h_A 60 RAKKVLELGTFTGYSALAMSLALP-DDGQV---ITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTL 125 (242)
T ss_dssp TCSEEEEEESCCSHHHHHHHHTSC-TTCEE---EEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHH
T ss_pred CcCEEEEeeCCcCHHHHHHHHhCC-CCCEE---EEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHH
Confidence 456899999999999988853321 24555 49999987655444443 35788888987764
No 232
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=78.08 E-value=1.3 Score=46.87 Aligned_cols=55 Identities=24% Similarity=0.149 Sum_probs=37.9
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC------CCceeecCchHH
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH------PETEVRNESAED 398 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~------p~~~v~~~~~~~ 398 (718)
...+||||-||.|.++.-+ .++|..-+ .|||+++ +++..+.|. +...++..|+++
T Consensus 64 ~~~~VLDiGcGtG~ls~~l----a~~g~~~v--~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~ 124 (340)
T 2fyt_A 64 KDKVVLDVGCGTGILSMFA----AKAGAKKV--LGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEE 124 (340)
T ss_dssp TTCEEEEETCTTSHHHHHH----HHTTCSEE--EEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTT
T ss_pred CCCEEEEeeccCcHHHHHH----HHcCCCEE--EEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHH
Confidence 4568999999999988776 45575323 5999996 555555543 456666666644
No 233
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=78.04 E-value=2 Score=42.49 Aligned_cols=56 Identities=21% Similarity=0.239 Sum_probs=40.3
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC------CCceeecCchH
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH------PETEVRNESAE 397 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~------p~~~v~~~~~~ 397 (718)
....+|||+-||.|.++.-|. +..|.++ .++|+++.+.+..+.|. +...++..|+.
T Consensus 35 ~~~~~VLDiGcG~G~~~~~la---~~~~~~v---~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~ 96 (256)
T 1nkv_A 35 KPGTRILDLGSGSGEMLCTWA---RDHGITG---TGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAA 96 (256)
T ss_dssp CTTCEEEEETCTTCHHHHHHH---HHTCCEE---EEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCT
T ss_pred CCCCEEEEECCCCCHHHHHHH---HhcCCeE---EEEeCCHHHHHHHHHHHHhcCCCcceEEEECChH
Confidence 345689999999999888773 3347665 49999999988877664 23555555543
No 234
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=77.94 E-value=2.1 Score=42.37 Aligned_cols=57 Identities=11% Similarity=0.024 Sum_probs=41.8
Q ss_pred cccceeccccccchhhHhHhhhhhhc--CCeeEeEEeecccHHHHHHHHhhCC------CceeecCchHHH
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLA--GLNLVTRWAVDINEYACQSLKLNHP------ETEVRNESAEDF 399 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~a--G~~~~~~~avd~~~~A~~t~~~N~p------~~~v~~~~~~~~ 399 (718)
...+|||+-||.|.++.-|. +.. +.++ .+||+++.+++..+.|+. ...++..|+.++
T Consensus 60 ~~~~VLdiG~G~G~~~~~la---~~~~~~~~v---~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~ 124 (239)
T 2hnk_A 60 GAKRIIEIGTFTGYSSLCFA---SALPEDGKI---LCCDVSEEWTNVARKYWKENGLENKIFLKLGSALET 124 (239)
T ss_dssp TCSEEEEECCTTCHHHHHHH---HHSCTTCEE---EEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHH
T ss_pred CcCEEEEEeCCCCHHHHHHH---HhCCCCCEE---EEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHH
Confidence 45689999999999988773 222 4454 599999999888777741 266777777654
No 235
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=77.78 E-value=1.7 Score=45.23 Aligned_cols=56 Identities=13% Similarity=0.084 Sum_probs=40.6
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCC---eeEeEEeecccHHHHHHHHhhC-----CCceeecCchHH
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGL---NLVTRWAVDINEYACQSLKLNH-----PETEVRNESAED 398 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~---~~~~~~avd~~~~A~~t~~~N~-----p~~~v~~~~~~~ 398 (718)
+...+|||+.||.|.++.-|. ..|. ++ .++|+++.+++..+.|. ++..+...|+.+
T Consensus 74 ~~~~~VLDiGcG~G~~~~~la----~~~~~~~~v---~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~ 137 (317)
T 1dl5_A 74 DKGMRVLEIGGGTGYNAAVMS----RVVGEKGLV---VSVEYSRKICEIAKRNVERLGIENVIFVCGDGYY 137 (317)
T ss_dssp CTTCEEEEECCTTSHHHHHHH----HHHCTTCEE---EEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGG
T ss_pred CCcCEEEEecCCchHHHHHHH----HhcCCCCEE---EEEECCHHHHHHHHHHHHHcCCCCeEEEECChhh
Confidence 345689999999999987773 2232 24 59999999988877763 456677776654
No 236
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=77.30 E-value=1.8 Score=44.16 Aligned_cols=53 Identities=9% Similarity=0.087 Sum_probs=41.3
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCe--eEeEEeecccHHHHHHHHhhCC---CceeecCchHH
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLN--LVTRWAVDINEYACQSLKLNHP---ETEVRNESAED 398 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~--~~~~~avd~~~~A~~t~~~N~p---~~~v~~~~~~~ 398 (718)
...+|||+=||.|.++. + .. |.+ + .|||+|+..++.++.|+. +..+++.|+.+
T Consensus 21 ~~~~VLEIG~G~G~lt~-l----~~-~~~~~v---~avEid~~~~~~a~~~~~~~~~v~~i~~D~~~ 78 (252)
T 1qyr_A 21 KGQAMVEIGPGLAALTE-P----VG-ERLDQL---TVIELDRDLAARLQTHPFLGPKLTIYQQDAMT 78 (252)
T ss_dssp TTCCEEEECCTTTTTHH-H----HH-TTCSCE---EEECCCHHHHHHHHTCTTTGGGEEEECSCGGG
T ss_pred CcCEEEEECCCCcHHHH-h----hh-CCCCeE---EEEECCHHHHHHHHHHhccCCceEEEECchhh
Confidence 34589999999999999 7 33 333 4 599999999999998864 56777777754
No 237
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=77.27 E-value=2.1 Score=42.61 Aligned_cols=55 Identities=20% Similarity=0.193 Sum_probs=39.9
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC-----CCceeecCchH
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH-----PETEVRNESAE 397 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~-----p~~~v~~~~~~ 397 (718)
....+|||+-||.|.++.-| ...+.++ .++|+++...+..+.+. ++..+...|++
T Consensus 36 ~~~~~vLDiGcG~G~~~~~l----~~~~~~v---~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~ 95 (260)
T 1vl5_A 36 KGNEEVLDVATGGGHVANAF----APFVKKV---VAFDLTEDILKVARAFIEGNGHQQVEYVQGDAE 95 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHH----GGGSSEE---EEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-
T ss_pred CCCCEEEEEeCCCCHHHHHH----HHhCCEE---EEEeCCHHHHHHHHHHHHhcCCCceEEEEecHH
Confidence 35668999999999988877 3445444 59999998888776653 55666666554
No 238
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=77.25 E-value=2.7 Score=40.87 Aligned_cols=45 Identities=20% Similarity=0.229 Sum_probs=34.1
Q ss_pred ccccceeccccccchhhHhHhhhhhhcC--CeeEeEEeecccHHHHHHHHhhC
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAG--LNLVTRWAVDINEYACQSLKLNH 386 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG--~~~~~~~avd~~~~A~~t~~~N~ 386 (718)
....++||+.||.|+++.-|. +..| .++ .++|+++.+++..+.|.
T Consensus 76 ~~~~~vLDiG~G~G~~~~~la---~~~~~~~~v---~~vD~s~~~~~~a~~~~ 122 (226)
T 1i1n_A 76 HEGAKALDVGSGSGILTACFA---RMVGCTGKV---IGIDHIKELVDDSVNNV 122 (226)
T ss_dssp CTTCEEEEETCTTSHHHHHHH---HHHCTTCEE---EEEESCHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCcCHHHHHHH---HHhCCCcEE---EEEeCCHHHHHHHHHHH
Confidence 445699999999999998773 2334 344 59999999988877664
No 239
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=77.12 E-value=1.8 Score=44.62 Aligned_cols=57 Identities=18% Similarity=0.175 Sum_probs=41.1
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCC------CceeecCchHH
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHP------ETEVRNESAED 398 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p------~~~v~~~~~~~ 398 (718)
....+|||+-||.|+++.-|. +..|.++ .+||+++.+++..+.+.. ...+...|+.+
T Consensus 89 ~~~~~vLDiGcG~G~~~~~la---~~~~~~v---~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 151 (318)
T 2fk8_A 89 KPGMTLLDIGCGWGTTMRRAV---ERFDVNV---IGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWED 151 (318)
T ss_dssp CTTCEEEEESCTTSHHHHHHH---HHHCCEE---EEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGG
T ss_pred CCcCEEEEEcccchHHHHHHH---HHCCCEE---EEEECCHHHHHHHHHHHHhcCCCCceEEEECChHH
Confidence 345689999999999988773 2237765 499999999888777642 35566666543
No 240
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=76.38 E-value=3.7 Score=43.12 Aligned_cols=57 Identities=16% Similarity=0.176 Sum_probs=42.8
Q ss_pred ccceeccccccchhhHhHhhhhhhcC-CeeEeEEeecccHHHHHHHHhhCC---------CceeecCchHHHH
Q 047980 338 DVKLLDLYSGCGAMSTGLCLGANLAG-LNLVTRWAVDINEYACQSLKLNHP---------ETEVRNESAEDFL 400 (718)
Q Consensus 338 ~~~~lDLFsG~Gg~s~Gl~~g~~~aG-~~~~~~~avd~~~~A~~t~~~N~p---------~~~v~~~~~~~~l 400 (718)
..+||||-||.|+++.-+. +..+ .++ .+||+|+.+++..+.|++ ...++..|+.+++
T Consensus 109 ~~~VLdIG~G~G~~~~~l~---~~~~~~~v---~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l 175 (314)
T 2b2c_A 109 PKRVLIIGGGDGGILREVL---KHESVEKV---TMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFL 175 (314)
T ss_dssp CCEEEEESCTTSHHHHHHT---TCTTCCEE---EEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHH
T ss_pred CCEEEEEcCCcCHHHHHHH---HcCCCCEE---EEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHH
Confidence 4689999999999888773 2222 343 599999999999888875 3567788886653
No 241
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=76.35 E-value=2.4 Score=42.64 Aligned_cols=43 Identities=26% Similarity=0.104 Sum_probs=34.4
Q ss_pred ccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhh
Q 047980 338 DVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLN 385 (718)
Q Consensus 338 ~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N 385 (718)
..+|+|+-||.|-++.-+ ...|... .++|+|+|+.|++.-+.|
T Consensus 16 g~~VlDIGtGsG~l~i~l----a~~~~~~-~V~avDi~~~al~~A~~N 58 (225)
T 3kr9_A 16 GAILLDVGSDHAYLPIEL----VERGQIK-SAIAGEVVEGPYQSAVKN 58 (225)
T ss_dssp TEEEEEETCSTTHHHHHH----HHTTSEE-EEEEEESSHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHH----HHhCCCC-EEEEEECCHHHHHHHHHH
Confidence 458999999999998887 4455332 237999999999998888
No 242
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=76.24 E-value=2.3 Score=42.52 Aligned_cols=58 Identities=12% Similarity=0.157 Sum_probs=39.7
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhh-----------CCCceeecCchHH
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLN-----------HPETEVRNESAED 398 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N-----------~p~~~v~~~~~~~ 398 (718)
....++|||=||.|.++.-|.. ...+.++ .+||+++.+++..+.| .++..++..|+.+
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~--~~p~~~v---~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~ 113 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSP--LFPDTLI---LGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMK 113 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGG--GSTTSEE---EEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTT
T ss_pred CCCCeEEEEccCCcHHHHHHHH--HCCCCeE---EEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHH
Confidence 4456899999999999988731 1124554 4999999887654432 3566777777654
No 243
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=76.17 E-value=2.8 Score=40.22 Aligned_cols=52 Identities=17% Similarity=0.146 Sum_probs=39.5
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCCCceeecCch
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESA 396 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p~~~v~~~~~ 396 (718)
....++||+-||.|.++.-| ...|.++ .++|+++.+.+..+.+.. .+...|+
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l----~~~~~~~---~~~D~~~~~~~~~~~~~~--~~~~~d~ 82 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAI----KENGTRV---SGIEAFPEAAEQAKEKLD--HVVLGDI 82 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHH----HTTTCEE---EEEESSHHHHHHHHTTSS--EEEESCT
T ss_pred cCCCcEEEeCCCCCHHHHHH----HhcCCeE---EEEeCCHHHHHHHHHhCC--cEEEcch
Confidence 45679999999999998877 3347655 599999999998888764 4444444
No 244
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=75.81 E-value=2.5 Score=42.74 Aligned_cols=57 Identities=16% Similarity=0.151 Sum_probs=41.9
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC------CCceeecCchHH
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH------PETEVRNESAED 398 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~------p~~~v~~~~~~~ 398 (718)
....+|||+-||.|+++.-+. +..|.++ .+||+++..++..+.+. +...+...|+.+
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~---~~~~~~v---~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 125 (287)
T 1kpg_A 63 QPGMTLLDVGCGWGATMMRAV---EKYDVNV---VGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQ 125 (287)
T ss_dssp CTTCEEEEETCTTSHHHHHHH---HHHCCEE---EEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGG
T ss_pred CCcCEEEEECCcccHHHHHHH---HHcCCEE---EEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhh
Confidence 345689999999999988773 3457765 49999999988877764 355666666644
No 245
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=75.74 E-value=2 Score=44.14 Aligned_cols=59 Identities=12% Similarity=0.065 Sum_probs=41.9
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCCC------ceeecCchHH
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPE------TEVRNESAED 398 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p~------~~v~~~~~~~ 398 (718)
....+|||+-||.|.++.-|... ...|.++ .++|+++.+++..+.|... ..++..|+.+
T Consensus 117 ~~~~~vLDiGcG~G~~~~~la~~-~~~~~~v---~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 181 (305)
T 3ocj_A 117 RPGCVVASVPCGWMSELLALDYS-ACPGVQL---VGIDYDPEALDGATRLAAGHALAGQITLHRQDAWK 181 (305)
T ss_dssp CTTCEEEETTCTTCHHHHTSCCT-TCTTCEE---EEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGG
T ss_pred CCCCEEEEecCCCCHHHHHHHHh-cCCCCeE---EEEECCHHHHHHHHHHHHhcCCCCceEEEECchhc
Confidence 34568999999999988776211 2235555 4999999999999988764 4555655543
No 246
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=75.64 E-value=2.3 Score=40.48 Aligned_cols=54 Identities=11% Similarity=0.166 Sum_probs=37.1
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC----CCceeecCch
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH----PETEVRNESA 396 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~----p~~~v~~~~~ 396 (718)
...++||+-||.|.++..+. ...|.++ .+||+++.+.+..+.+. +...+...|+
T Consensus 23 ~~~~vLDiGcG~G~~~~~~~---~~~~~~v---~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~ 80 (209)
T 2p8j_A 23 LDKTVLDCGAGGDLPPLSIF---VEDGYKT---YGIEISDLQLKKAENFSRENNFKLNISKGDI 80 (209)
T ss_dssp SCSEEEEESCCSSSCTHHHH---HHTTCEE---EEEECCHHHHHHHHHHHHHHTCCCCEEECCT
T ss_pred CCCEEEEECCCCCHHHHHHH---HhCCCEE---EEEECCHHHHHHHHHHHHhcCCceEEEECch
Confidence 35689999999887654442 4567765 49999999888776652 4455555444
No 247
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=75.43 E-value=4.9 Score=41.90 Aligned_cols=61 Identities=16% Similarity=0.097 Sum_probs=47.6
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC--CCceeecCchHHHHHHHHH
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH--PETEVRNESAEDFLTLLRE 405 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~--p~~~v~~~~~~~~l~~lke 405 (718)
..-.+||.-||.||-|..|. +. +..+ +|+|.|+.|++..+. . +...+++.+-.++..+|++
T Consensus 22 ~gg~~VD~T~G~GGHS~~il---~~-~g~V---igiD~Dp~Ai~~A~~-L~~~rv~lv~~~f~~l~~~L~~ 84 (285)
T 1wg8_A 22 PGGVYVDATLGGAGHARGIL---ER-GGRV---IGLDQDPEAVARAKG-LHLPGLTVVQGNFRHLKRHLAA 84 (285)
T ss_dssp TTCEEEETTCTTSHHHHHHH---HT-TCEE---EEEESCHHHHHHHHH-TCCTTEEEEESCGGGHHHHHHH
T ss_pred CCCEEEEeCCCCcHHHHHHH---HC-CCEE---EEEeCCHHHHHHHHh-hccCCEEEEECCcchHHHHHHH
Confidence 34589999999999999994 23 5555 599999999987766 4 4577888888888666665
No 248
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=75.22 E-value=2 Score=45.53 Aligned_cols=56 Identities=20% Similarity=0.191 Sum_probs=37.2
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHH----hhC-CC-ceeecCchHH
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLK----LNH-PE-TEVRNESAED 398 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~----~N~-p~-~~v~~~~~~~ 398 (718)
....+|||+-||.|.++.-+ ..+|..-+ .|||+++ +++..+ .|. ++ ..++..|+++
T Consensus 65 ~~~~~VLDvGcG~G~~~~~l----a~~g~~~v--~gvD~s~-~l~~a~~~~~~~~~~~~v~~~~~d~~~ 126 (349)
T 3q7e_A 65 FKDKVVLDVGSGTGILCMFA----AKAGARKV--IGIECSS-ISDYAVKIVKANKLDHVVTIIKGKVEE 126 (349)
T ss_dssp HTTCEEEEESCTTSHHHHHH----HHTTCSEE--EEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTT
T ss_pred CCCCEEEEEeccchHHHHHH----HHCCCCEE--EEECcHH-HHHHHHHHHHHcCCCCcEEEEECcHHH
Confidence 34568999999999998877 45576333 5999996 444433 332 22 5666666654
No 249
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=74.64 E-value=2.8 Score=42.69 Aligned_cols=43 Identities=12% Similarity=-0.040 Sum_probs=34.5
Q ss_pred ccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhh
Q 047980 338 DVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLN 385 (718)
Q Consensus 338 ~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N 385 (718)
..+|+|+-||.|-++..| ...|-.. .++|+|+|+.|++.-+.|
T Consensus 22 g~~VlDIGtGsG~l~i~l----a~~~~~~-~V~avDi~~~al~~A~~N 64 (244)
T 3gnl_A 22 NERIADIGSDHAYLPCFA----VKNQTAS-FAIAGEVVDGPFQSAQKQ 64 (244)
T ss_dssp SEEEEEETCSTTHHHHHH----HHTTSEE-EEEEEESSHHHHHHHHHH
T ss_pred CCEEEEECCccHHHHHHH----HHhCCCC-EEEEEECCHHHHHHHHHH
Confidence 468999999999999888 4455322 237999999999999888
No 250
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=74.30 E-value=1.9 Score=45.18 Aligned_cols=45 Identities=22% Similarity=0.189 Sum_probs=34.3
Q ss_pred ccccceeccccccchhhHhHhhhhhhcC--CeeEeEEeecccHHHHHHHHhhC
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAG--LNLVTRWAVDINEYACQSLKLNH 386 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG--~~~~~~~avd~~~~A~~t~~~N~ 386 (718)
....+|||+.||.|.++.-|. +..| .++ .++|+++.+++..+.|.
T Consensus 104 ~~g~~VLDiG~G~G~~~~~la---~~~g~~~~v---~~vD~~~~~~~~a~~~~ 150 (336)
T 2b25_A 104 NPGDTVLEAGSGSGGMSLFLS---KAVGSQGRV---ISFEVRKDHHDLAKKNY 150 (336)
T ss_dssp CTTCEEEEECCTTSHHHHHHH---HHHCTTCEE---EEEESSHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcCHHHHHHH---HHhCCCceE---EEEeCCHHHHHHHHHHH
Confidence 345689999999999998873 2224 444 59999999988887774
No 251
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=74.25 E-value=2.9 Score=42.21 Aligned_cols=44 Identities=23% Similarity=0.050 Sum_probs=34.9
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhh
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLN 385 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N 385 (718)
...+|+|+-||.|-++..+ ...|... .++|+|+++.|.+.-+.|
T Consensus 21 ~g~~VlDIGtGsG~l~i~l----a~~~~~~-~V~AvDi~~~al~~A~~N 64 (230)
T 3lec_A 21 KGARLLDVGSDHAYLPIFL----LQMGYCD-FAIAGEVVNGPYQSALKN 64 (230)
T ss_dssp TTEEEEEETCSTTHHHHHH----HHTTCEE-EEEEEESSHHHHHHHHHH
T ss_pred CCCEEEEECCchHHHHHHH----HHhCCCC-EEEEEECCHHHHHHHHHH
Confidence 3468999999999999888 4455322 237999999999999888
No 252
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=73.85 E-value=2.5 Score=41.64 Aligned_cols=45 Identities=13% Similarity=0.200 Sum_probs=34.1
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH 386 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~ 386 (718)
....+|||+.||.|.++.-|. +..|.++ .++|+++.+++..+.|.
T Consensus 90 ~~~~~vLdiG~G~G~~~~~la---~~~~~~v---~~vD~~~~~~~~a~~~~ 134 (235)
T 1jg1_A 90 KPGMNILEVGTGSGWNAALIS---EIVKTDV---YTIERIPELVEFAKRNL 134 (235)
T ss_dssp CTTCCEEEECCTTSHHHHHHH---HHHCSCE---EEEESCHHHHHHHHHHH
T ss_pred CCCCEEEEEeCCcCHHHHHHH---HHhCCEE---EEEeCCHHHHHHHHHHH
Confidence 345689999999999988774 2333444 59999999988887764
No 253
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=73.25 E-value=2.9 Score=41.34 Aligned_cols=46 Identities=17% Similarity=0.045 Sum_probs=35.5
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH 386 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~ 386 (718)
..+.+||||=||.|-+++-+ ....-.+ .+||+|+|+.+++..+.|.
T Consensus 48 ~~~~~VLDlGCG~GplAl~l----~~~~p~a-~~~A~Di~~~~leiar~~~ 93 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQ----WNENEKI-IYHAYDIDRAEIAFLSSII 93 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHH----HCSSCCC-EEEEECSCHHHHHHHHHHH
T ss_pred CCCCeEEEecCCCCHHHHHH----HhcCCCC-EEEEEeCCHHHHHHHHHHH
Confidence 34779999999999888877 2332223 4589999999999998885
No 254
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=73.23 E-value=3.5 Score=45.54 Aligned_cols=42 Identities=24% Similarity=0.249 Sum_probs=31.9
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHH
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSL 382 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~ 382 (718)
....+||||-||.|.++..|. +..|..-+ ++||+++.+++.-
T Consensus 241 ~~g~~VLDLGCGsG~la~~LA---~~~g~~~V--~GVDis~~~l~~A 282 (433)
T 1u2z_A 241 KKGDTFMDLGSGVGNCVVQAA---LECGCALS--FGCEIMDDASDLT 282 (433)
T ss_dssp CTTCEEEEESCTTSHHHHHHH---HHHCCSEE--EEEECCHHHHHHH
T ss_pred CCCCEEEEeCCCcCHHHHHHH---HHCCCCEE--EEEeCCHHHHHHH
Confidence 355689999999999998883 33454323 6999999987765
No 255
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=73.10 E-value=2.7 Score=42.73 Aligned_cols=55 Identities=20% Similarity=0.177 Sum_probs=39.7
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC------CCceeecCch
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH------PETEVRNESA 396 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~------p~~~v~~~~~ 396 (718)
....+|||+-||.|.++.-|. +..|.++ .++|+++.+++..+.+. +...+...|+
T Consensus 81 ~~~~~vLDiGcG~G~~~~~l~---~~~~~~v---~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~ 141 (297)
T 2o57_A 81 QRQAKGLDLGAGYGGAARFLV---RKFGVSI---DCLNIAPVQNKRNEEYNNQAGLADNITVKYGSF 141 (297)
T ss_dssp CTTCEEEEETCTTSHHHHHHH---HHHCCEE---EEEESCHHHHHHHHHHHHHHTCTTTEEEEECCT
T ss_pred CCCCEEEEeCCCCCHHHHHHH---HHhCCEE---EEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCc
Confidence 455699999999999998873 2237665 49999999888776654 3455555554
No 256
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=72.94 E-value=2.2 Score=43.35 Aligned_cols=58 Identities=17% Similarity=0.119 Sum_probs=40.2
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCC----CceeecCchH
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHP----ETEVRNESAE 397 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p----~~~v~~~~~~ 397 (718)
....++||+-||.|.++.-|..-. ..|.++ .++|+++.+.+..+.+.. +..+...|+.
T Consensus 21 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~~~v---~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~ 82 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGYLGLVLMPLL-PEGSKY---TGIDSGETLLAEARELFRLLPYDSEFLEGDAT 82 (284)
T ss_dssp CSCCEEEEETCTTTHHHHHHTTTS-CTTCEE---EEEESCHHHHHHHHHHHHSSSSEEEEEESCTT
T ss_pred CCCCeEEEecCCCCHHHHHHHHhC-CCCCEE---EEEECCHHHHHHHHHHHHhcCCceEEEEcchh
Confidence 456799999999999988773110 014555 499999999887777643 4555555553
No 257
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=72.85 E-value=1.7 Score=43.62 Aligned_cols=54 Identities=24% Similarity=0.195 Sum_probs=40.8
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCCCceeecCchH
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAE 397 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p~~~v~~~~~~ 397 (718)
....+|||+-||.|.++.-| ...|.+++ ++|+++...+..+.+. +..+...|++
T Consensus 33 ~~~~~vLDiGcG~G~~~~~l----~~~~~~v~---gvD~s~~~~~~a~~~~-~~~~~~~d~~ 86 (261)
T 3ege_A 33 PKGSVIADIGAGTGGYSVAL----ANQGLFVY---AVEPSIVMRQQAVVHP-QVEWFTGYAE 86 (261)
T ss_dssp CTTCEEEEETCTTSHHHHHH----HTTTCEEE---EECSCHHHHHSSCCCT-TEEEECCCTT
T ss_pred CCCCEEEEEcCcccHHHHHH----HhCCCEEE---EEeCCHHHHHHHHhcc-CCEEEECchh
Confidence 45679999999999999888 44677664 9999998877655554 6666666554
No 258
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=72.26 E-value=2.6 Score=41.25 Aligned_cols=44 Identities=18% Similarity=0.242 Sum_probs=33.2
Q ss_pred ccccceeccccccchhhHhHhhhhhhcC-------CeeEeEEeecccHHHHHHHHhh
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAG-------LNLVTRWAVDINEYACQSLKLN 385 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG-------~~~~~~~avd~~~~A~~t~~~N 385 (718)
....+|||+.||.|.++.-|.. ..| .++ .++|+++.+.+..+.|
T Consensus 83 ~~~~~VLdiG~G~G~~~~~la~---~~~~~~~~~~~~v---~~vD~~~~~~~~a~~~ 133 (227)
T 1r18_A 83 KPGARILDVGSGSGYLTACFYR---YIKAKGVDADTRI---VGIEHQAELVRRSKAN 133 (227)
T ss_dssp CTTCEEEEESCTTSHHHHHHHH---HHHHSCCCTTCEE---EEEESCHHHHHHHHHH
T ss_pred CCCCEEEEECCCccHHHHHHHH---hcccccCCccCEE---EEEEcCHHHHHHHHHH
Confidence 3456899999999999887742 233 244 5999999988877766
No 259
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=71.89 E-value=3 Score=47.37 Aligned_cols=48 Identities=17% Similarity=0.188 Sum_probs=35.5
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhh
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLN 385 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N 385 (718)
....+|+|.+||.|||.+.+..-+...+- ...+++|+|+.+...-+.|
T Consensus 220 ~~~~~VlDPaCGSG~fLi~a~~~l~~~~~--~~i~G~Eid~~~~~lA~~N 267 (542)
T 3lkd_A 220 KQGFTLYDATMGSGSLLLNAKRYSRQPQT--VVYFGQELNTSTYNLARMN 267 (542)
T ss_dssp CTTCEEEETTCTTSTTGGGHHHHCSCTTT--CEEEEEESCHHHHHHHHHH
T ss_pred CCCCEEeecccchhHHHHHHHHHHHhccC--ceEEEEECcHHHHHHHHHH
Confidence 45679999999999998877432221221 2347999999999988887
No 260
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=71.44 E-value=3.2 Score=39.90 Aligned_cols=45 Identities=16% Similarity=0.235 Sum_probs=33.9
Q ss_pred ccccceeccccccchhhHhHhhhhhhcC--CeeEeEEeecccHHHHHHHHhhC
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAG--LNLVTRWAVDINEYACQSLKLNH 386 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG--~~~~~~~avd~~~~A~~t~~~N~ 386 (718)
....++||+-||.|.++.-|. +..| .++ .++|+++.+.+..+.|.
T Consensus 76 ~~~~~vLdiG~G~G~~~~~l~---~~~~~~~~v---~~vD~~~~~~~~a~~~~ 122 (215)
T 2yxe_A 76 KPGMKVLEIGTGCGYHAAVTA---EIVGEDGLV---VSIERIPELAEKAERTL 122 (215)
T ss_dssp CTTCEEEEECCTTSHHHHHHH---HHHCTTSEE---EEEESCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCccHHHHHHH---HHhCCCCEE---EEEeCCHHHHHHHHHHH
Confidence 345699999999999888773 2233 444 59999999888777664
No 261
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=71.31 E-value=2.3 Score=43.82 Aligned_cols=44 Identities=20% Similarity=0.131 Sum_probs=32.8
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH 386 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~ 386 (718)
...+||||-||.|+++.-|. +..+.++ .++|+++.+++..+.++
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~---~~~~~~v---~gvD~s~~~l~~a~~~~ 77 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWK---KGRINKL---VCTDIADVSVKQCQQRY 77 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHH---HTTCSEE---EEEESCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCcHHHHHHH---hcCCCEE---EEEeCCHHHHHHHHHHH
Confidence 45689999999999988773 2223444 59999999888777664
No 262
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=70.31 E-value=3.8 Score=43.35 Aligned_cols=55 Identities=27% Similarity=0.311 Sum_probs=36.1
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHh----hC--CCceeecCchHH
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKL----NH--PETEVRNESAED 398 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~----N~--p~~~v~~~~~~~ 398 (718)
...+|||+-||.|.++.-+ ..+|..-+ .|||+++.+ +..+. |. +...++..|+++
T Consensus 50 ~~~~VLDiGcGtG~ls~~l----a~~g~~~V--~~vD~s~~~-~~a~~~~~~~~l~~~v~~~~~d~~~ 110 (348)
T 2y1w_A 50 KDKIVLDVGCGSGILSFFA----AQAGARKI--YAVEASTMA-QHAEVLVKSNNLTDRIVVIPGKVEE 110 (348)
T ss_dssp TTCEEEEETCTTSHHHHHH----HHTTCSEE--EEEECSTHH-HHHHHHHHHTTCTTTEEEEESCTTT
T ss_pred CcCEEEEcCCCccHHHHHH----HhCCCCEE--EEECCHHHH-HHHHHHHHHcCCCCcEEEEEcchhh
Confidence 4568999999999998776 44565333 599999733 33333 32 346666666643
No 263
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=70.08 E-value=2.7 Score=44.10 Aligned_cols=55 Identities=24% Similarity=0.192 Sum_probs=35.8
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC------CCceeecCchHH
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH------PETEVRNESAED 398 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~------p~~~v~~~~~~~ 398 (718)
...+|||+-||.|.++.-+ ..+|..-+ .|||+++ .++..+.|. ....++..|+++
T Consensus 38 ~~~~VLDiGcGtG~ls~~l----a~~g~~~v--~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~ 98 (328)
T 1g6q_1 38 KDKIVLDVGCGTGILSMFA----AKHGAKHV--IGVDMSS-IIEMAKELVELNGFSDKITLLRGKLED 98 (328)
T ss_dssp TTCEEEEETCTTSHHHHHH----HHTCCSEE--EEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTT
T ss_pred CCCEEEEecCccHHHHHHH----HHCCCCEE--EEEChHH-HHHHHHHHHHHcCCCCCEEEEECchhh
Confidence 3468999999999988766 45676333 6999994 444444432 235566655543
No 264
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=69.92 E-value=5.6 Score=40.03 Aligned_cols=57 Identities=18% Similarity=0.182 Sum_probs=36.2
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHH---hhCCCceeecCch
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLK---LNHPETEVRNESA 396 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~---~N~p~~~v~~~~~ 396 (718)
+...+||||-||.|+.+.-+..-+...| .| +|||+++...+.+. ...++..++..|+
T Consensus 75 ~~g~~VLDlG~GtG~~t~~la~~v~~~G-~V---~avD~s~~~l~~l~~~a~~r~nv~~i~~Da 134 (232)
T 3id6_C 75 RKGTKVLYLGAASGTTISHVSDIIELNG-KA---YGVEFSPRVVRELLLVAQRRPNIFPLLADA 134 (232)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHTTTS-EE---EEEECCHHHHHHHHHHHHHCTTEEEEECCT
T ss_pred CCCCEEEEEeecCCHHHHHHHHHhCCCC-EE---EEEECcHHHHHHHHHHhhhcCCeEEEEccc
Confidence 4567899999999999887743222233 33 69999997653321 1234555555554
No 265
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=69.00 E-value=3 Score=41.20 Aligned_cols=46 Identities=13% Similarity=0.007 Sum_probs=35.7
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCC-eeEeEEeecccHHHHHHHHhhCCC
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGL-NLVTRWAVDINEYACQSLKLNHPE 388 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~-~~~~~~avd~~~~A~~t~~~N~p~ 388 (718)
....+||||-||.|.++.-+ ...|. ++ .++|+++.+.+..+.+...
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l----~~~~~~~v---~gvD~s~~~l~~a~~~~~~ 101 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLS----ACESFTEI---IVSDYTDQNLWELQKWLKK 101 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTT----GGGTEEEE---EEEESCHHHHHHHHHHHTT
T ss_pred cCCCEEEEECCCccHHHHHH----hhcccCeE---EEecCCHHHHHHHHHHHhc
Confidence 34568999999999888766 45666 43 5999999999888777654
No 266
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=68.08 E-value=4 Score=42.93 Aligned_cols=47 Identities=9% Similarity=0.171 Sum_probs=36.3
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCCCc
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPET 389 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p~~ 389 (718)
...-.|||.|||.|.... .+.+.|-+.+ ++|+++.+++.-+.+.-..
T Consensus 251 ~~~~~VlDpF~GsGtt~~----aa~~~gr~~i---g~e~~~~~~~~~~~r~~~~ 297 (323)
T 1boo_A 251 EPDDLVVDIFGGSNTTGL----VAERESRKWI---SFEMKPEYVAASAFRFLDN 297 (323)
T ss_dssp CTTCEEEETTCTTCHHHH----HHHHTTCEEE---EEESCHHHHHHHHGGGSCS
T ss_pred CCCCEEEECCCCCCHHHH----HHHHcCCCEE---EEeCCHHHHHHHHHHHHhc
Confidence 344579999999995443 3467898875 9999999999988886543
No 267
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=67.88 E-value=1.8 Score=43.43 Aligned_cols=50 Identities=20% Similarity=0.181 Sum_probs=36.9
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCCCcee
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEV 391 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p~~~v 391 (718)
....++|||-||.|+++.-| .+.|..-+ .|||+++.+.+.-+.|.+...+
T Consensus 36 ~~g~~VLDiGcGtG~~t~~l----a~~g~~~V--~gvDis~~ml~~a~~~~~~~~~ 85 (232)
T 3opn_A 36 INGKTCLDIGSSTGGFTDVM----LQNGAKLV--YALDVGTNQLAWKIRSDERVVV 85 (232)
T ss_dssp CTTCEEEEETCTTSHHHHHH----HHTTCSEE--EEECSSCCCCCHHHHTCTTEEE
T ss_pred CCCCEEEEEccCCCHHHHHH----HhcCCCEE--EEEcCCHHHHHHHHHhCccccc
Confidence 34568999999999998777 45575333 5999999887776667665443
No 268
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=67.85 E-value=1.9 Score=43.87 Aligned_cols=52 Identities=31% Similarity=0.254 Sum_probs=40.9
Q ss_pred cceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCCCceeecCchHH
Q 047980 339 VKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAED 398 (718)
Q Consensus 339 ~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p~~~v~~~~~~~ 398 (718)
-++|||=||.|.++..| ...|.++ .|||+++..++..+ .+|+..+...++++
T Consensus 41 ~~vLDvGcGtG~~~~~l----~~~~~~v---~gvD~s~~ml~~a~-~~~~v~~~~~~~e~ 92 (257)
T 4hg2_A 41 GDALDCGCGSGQASLGL----AEFFERV---HAVDPGEAQIRQAL-RHPRVTYAVAPAED 92 (257)
T ss_dssp SEEEEESCTTTTTHHHH----HTTCSEE---EEEESCHHHHHTCC-CCTTEEEEECCTTC
T ss_pred CCEEEEcCCCCHHHHHH----HHhCCEE---EEEeCcHHhhhhhh-hcCCceeehhhhhh
Confidence 47999999999999888 5677776 49999998877554 46787777776654
No 269
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=67.84 E-value=3.9 Score=41.92 Aligned_cols=46 Identities=17% Similarity=0.201 Sum_probs=35.0
Q ss_pred cccceeccccccchhhHhHhhhhhh-cCCeeEeEEeecccHHHHHHHHhhCCC
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANL-AGLNLVTRWAVDINEYACQSLKLNHPE 388 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~-aG~~~~~~~avd~~~~A~~t~~~N~p~ 388 (718)
...+|||+-||.|.++.-|. .. .+.++ .+||+++.+++..+.|...
T Consensus 46 ~~~~VLDiGCG~G~~~~~la---~~~~~~~v---~gvDis~~~i~~A~~~~~~ 92 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIA---CKWGPSRM---VGLDIDSRLIHSARQNIRH 92 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHH---HHTCCSEE---EEEESCHHHHHHHHHTC--
T ss_pred CCCcEEEeCCCCCHHHHHHH---HHcCCCEE---EEECCCHHHHHHHHHHHHh
Confidence 35689999999999988873 22 24554 5999999999999888643
No 270
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=66.86 E-value=4.2 Score=43.50 Aligned_cols=59 Identities=14% Similarity=-0.009 Sum_probs=42.4
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC-------------CCceeecCchHH
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH-------------PETEVRNESAED 398 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~-------------p~~~v~~~~~~~ 398 (718)
....+||||-||.|.++.-|..-. ..+.++ .++|+++.+.+..+.|. ++..++..|+++
T Consensus 82 ~~~~~VLDlGcG~G~~~~~la~~~-~~~~~v---~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~ 153 (383)
T 4fsd_A 82 LEGATVLDLGCGTGRDVYLASKLV-GEHGKV---IGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIEN 153 (383)
T ss_dssp GTTCEEEEESCTTSHHHHHHHHHH-TTTCEE---EEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTC
T ss_pred CCCCEEEEecCccCHHHHHHHHHh-CCCCEE---EEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHH
Confidence 456789999999999887773210 134555 49999999998888773 566676666644
No 271
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=66.58 E-value=3.5 Score=43.41 Aligned_cols=42 Identities=21% Similarity=0.306 Sum_probs=33.3
Q ss_pred ccceeccccccchhhHhHhhhhhhcC--CeeEeEEeecccHHHHHHHHhhC
Q 047980 338 DVKLLDLYSGCGAMSTGLCLGANLAG--LNLVTRWAVDINEYACQSLKLNH 386 (718)
Q Consensus 338 ~~~~lDLFsG~Gg~s~Gl~~g~~~aG--~~~~~~~avd~~~~A~~t~~~N~ 386 (718)
..++|||.||.|.++.-+ ...| .++ .++|+++.+++..+.|.
T Consensus 197 ~~~VLDlGcG~G~~~~~l----a~~~~~~~v---~~vD~s~~~l~~a~~~~ 240 (343)
T 2pjd_A 197 KGKVLDVGCGAGVLSVAF----ARHSPKIRL---TLCDVSAPAVEASRATL 240 (343)
T ss_dssp CSBCCBTTCTTSHHHHHH----HHHCTTCBC---EEEESBHHHHHHHHHHH
T ss_pred CCeEEEecCccCHHHHHH----HHHCCCCEE---EEEECCHHHHHHHHHHH
Confidence 458999999999999887 3334 444 59999999998888774
No 272
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=66.39 E-value=2.2 Score=40.48 Aligned_cols=49 Identities=10% Similarity=0.035 Sum_probs=34.0
Q ss_pred cccceeccccccchhhHhHhhhhhhc---CCeeEeEEeecccHHHHHHHHhhCCCceeecCchH
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLA---GLNLVTRWAVDINEYACQSLKLNHPETEVRNESAE 397 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~a---G~~~~~~~avd~~~~A~~t~~~N~p~~~v~~~~~~ 397 (718)
...+||||-||.|+++.-|. +.. +.++ .|||+++.+ ..++..+...|+.
T Consensus 22 ~~~~vLDlGcG~G~~~~~l~---~~~~~~~~~v---~gvD~s~~~------~~~~v~~~~~d~~ 73 (201)
T 2plw_A 22 KNKIILDIGCYPGSWCQVIL---ERTKNYKNKI---IGIDKKIMD------PIPNVYFIQGEIG 73 (201)
T ss_dssp TTEEEEEESCTTCHHHHHHH---HHTTTSCEEE---EEEESSCCC------CCTTCEEEECCTT
T ss_pred CCCEEEEeCCCCCHHHHHHH---HHcCCCCceE---EEEeCCccC------CCCCceEEEcccc
Confidence 34689999999999998873 233 3444 599999842 3456666666654
No 273
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=65.77 E-value=6.4 Score=39.17 Aligned_cols=45 Identities=13% Similarity=0.206 Sum_probs=34.7
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH 386 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~ 386 (718)
....+|||+-||.|.++.-|. +..|.++ .++|+++.+++..+.+.
T Consensus 60 ~~~~~vLDiGcG~G~~~~~l~---~~~~~~v---~gvD~s~~~~~~a~~~~ 104 (273)
T 3bus_A 60 RSGDRVLDVGCGIGKPAVRLA---TARDVRV---TGISISRPQVNQANARA 104 (273)
T ss_dssp CTTCEEEEESCTTSHHHHHHH---HHSCCEE---EEEESCHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCCHHHHHHH---HhcCCEE---EEEeCCHHHHHHHHHHH
Confidence 345699999999999988773 3346665 49999999888777663
No 274
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=65.45 E-value=4.5 Score=45.06 Aligned_cols=55 Identities=24% Similarity=0.236 Sum_probs=36.4
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC------CCceeecCchHH
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH------PETEVRNESAED 398 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~------p~~~v~~~~~~~ 398 (718)
...+|||+.||.|.++.-+ ...|..-+ .|||+++ +++..+.|. ....++..|+.+
T Consensus 158 ~~~~VLDiGcGtG~la~~l----a~~~~~~V--~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~ 218 (480)
T 3b3j_A 158 KDKIVLDVGCGSGILSFFA----AQAGARKI--YAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEE 218 (480)
T ss_dssp TTCEEEEESCSTTHHHHHH----HHTTCSEE--EEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTT
T ss_pred CCCEEEEecCcccHHHHHH----HHcCCCEE--EEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhh
Confidence 4568999999999988766 34554223 5999998 555444432 345666666543
No 275
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=65.03 E-value=5.3 Score=43.21 Aligned_cols=56 Identities=25% Similarity=0.288 Sum_probs=39.0
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccH---HHHHHHHhhCC--CceeecCchHH
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINE---YACQSLKLNHP--ETEVRNESAED 398 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~---~A~~t~~~N~p--~~~v~~~~~~~ 398 (718)
+.-+|||+=||.|.+|+= |.++|.+-| +|||.++ .|.+..+.|.= ...+++.++++
T Consensus 83 ~~k~VLDvG~GtGiLs~~----Aa~aGA~~V--~ave~s~~~~~a~~~~~~n~~~~~i~~i~~~~~~ 143 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIF----CAQAGARRV--YAVEASAIWQQAREVVRFNGLEDRVHVLPGPVET 143 (376)
T ss_dssp TTCEEEEETCTTSHHHHH----HHHTTCSEE--EEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTT
T ss_pred CCCEEEEeCCCccHHHHH----HHHhCCCEE--EEEeChHHHHHHHHHHHHcCCCceEEEEeeeeee
Confidence 345799999999988753 367887655 6999885 45566666642 35666666654
No 276
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=63.02 E-value=5.3 Score=47.73 Aligned_cols=55 Identities=18% Similarity=0.154 Sum_probs=40.7
Q ss_pred cccceeccccccchhhHhHhhhhhhcC---CeeEeEEeecccHHHHHHHHh-----------hCCCceeecCchHH
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAG---LNLVTRWAVDINEYACQSLKL-----------NHPETEVRNESAED 398 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG---~~~~~~~avd~~~~A~~t~~~-----------N~p~~~v~~~~~~~ 398 (718)
...+||||-||.|.++.-| ...| .++ .+||+++.+.+..+. +.++..++..|+.+
T Consensus 721 ~g~rVLDVGCGTG~lai~L----Ar~g~p~a~V---tGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~d 789 (950)
T 3htx_A 721 SASTLVDFGCGSGSLLDSL----LDYPTSLQTI---IGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILE 789 (950)
T ss_dssp CCSEEEEETCSSSHHHHHH----TSSCCCCCEE---EEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTS
T ss_pred CCCEEEEECCCCCHHHHHH----HHhCCCCCeE---EEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHh
Confidence 5678999999999999888 4455 454 599999999888766 23456666665543
No 277
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=62.37 E-value=6.6 Score=40.78 Aligned_cols=42 Identities=21% Similarity=0.020 Sum_probs=31.5
Q ss_pred ccceeccccccchhhHhHhhhhhhcC-CeeEeEEeecccHHHHHHHHhhC
Q 047980 338 DVKLLDLYSGCGAMSTGLCLGANLAG-LNLVTRWAVDINEYACQSLKLNH 386 (718)
Q Consensus 338 ~~~~lDLFsG~Gg~s~Gl~~g~~~aG-~~~~~~~avd~~~~A~~t~~~N~ 386 (718)
..+||||-||.|+...-+ ...| .++ .+||+++.+.+.-+.+.
T Consensus 49 ~~~VLDlGCG~G~~l~~~----~~~~~~~v---~GiD~S~~~l~~A~~~~ 91 (302)
T 2vdw_A 49 KRKVLAIDFGNGADLEKY----FYGEIALL---VATDPDADAIARGNERY 91 (302)
T ss_dssp CCEEEETTCTTTTTHHHH----HHTTCSEE---EEEESCHHHHHHHHHHH
T ss_pred CCeEEEEecCCcHhHHHH----HhcCCCeE---EEEECCHHHHHHHHHHH
Confidence 568999999999866555 2334 444 49999999988777654
No 278
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=61.05 E-value=7.8 Score=35.02 Aligned_cols=50 Identities=16% Similarity=0.169 Sum_probs=40.2
Q ss_pred cccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCCCceeecCchHH
Q 047980 344 LYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAED 398 (718)
Q Consensus 344 LFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p~~~v~~~~~~~ 398 (718)
+.+|+|-+...+..-+...|++++ ++|.|+..++.++. .+..++..|+.+
T Consensus 11 iIiG~G~~G~~la~~L~~~g~~v~---vid~~~~~~~~~~~--~g~~~i~gd~~~ 60 (140)
T 3fwz_A 11 LLVGYGRVGSLLGEKLLASDIPLV---VIETSRTRVDELRE--RGVRAVLGNAAN 60 (140)
T ss_dssp EEECCSHHHHHHHHHHHHTTCCEE---EEESCHHHHHHHHH--TTCEEEESCTTS
T ss_pred EEECcCHHHHHHHHHHHHCCCCEE---EEECCHHHHHHHHH--cCCCEEECCCCC
Confidence 567999999888888888999875 89999999998876 366677666644
No 279
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=60.96 E-value=6.9 Score=38.15 Aligned_cols=40 Identities=20% Similarity=0.282 Sum_probs=28.8
Q ss_pred cccceeccccccchhhHhHhhhhhhcC-CeeEeEEeecccHHHHHHH
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAG-LNLVTRWAVDINEYACQSL 382 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG-~~~~~~~avd~~~~A~~t~ 382 (718)
...+||||-||.|.++.-|. ...| .++ +|||+++.+.+.+
T Consensus 57 ~g~~VLDlGcGtG~~~~~la---~~~~~~~V---~gvD~s~~~l~~~ 97 (210)
T 1nt2_A 57 GDERVLYLGAASGTTVSHLA---DIVDEGII---YAVEYSAKPFEKL 97 (210)
T ss_dssp SSCEEEEETCTTSHHHHHHH---HHTTTSEE---EEECCCHHHHHHH
T ss_pred CCCEEEEECCcCCHHHHHHH---HHcCCCEE---EEEECCHHHHHHH
Confidence 45689999999999887773 2332 333 6999999875433
No 280
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=60.65 E-value=8.2 Score=40.43 Aligned_cols=58 Identities=12% Similarity=0.079 Sum_probs=40.7
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC-----CCceeecCchHH
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH-----PETEVRNESAED 398 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~-----p~~~v~~~~~~~ 398 (718)
+...+|||+=||.||++.=+ + ++..|.+++ +||+++.+.+.-+.|. ....+...|+.+
T Consensus 121 ~~g~rVLDIGcG~G~~ta~~-l-A~~~ga~V~---gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~ 183 (298)
T 3fpf_A 121 RRGERAVFIGGGPLPLTGIL-L-SHVYGMRVN---VVEIEPDIAELSRKVIEGLGVDGVNVITGDETV 183 (298)
T ss_dssp CTTCEEEEECCCSSCHHHHH-H-HHTTCCEEE---EEESSHHHHHHHHHHHHHHTCCSEEEEESCGGG
T ss_pred CCcCEEEEECCCccHHHHHH-H-HHccCCEEE---EEECCHHHHHHHHHHHHhcCCCCeEEEECchhh
Confidence 45679999999999877433 2 244677764 9999999988877764 345566666543
No 281
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=58.68 E-value=2.1 Score=42.71 Aligned_cols=56 Identities=9% Similarity=-0.002 Sum_probs=36.7
Q ss_pred ccceeccccccchhhHhHhhhhh--hcCCeeEeEEeecccHHHHHHHHhhCCCceeecCch
Q 047980 338 DVKLLDLYSGCGAMSTGLCLGAN--LAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESA 396 (718)
Q Consensus 338 ~~~~lDLFsG~Gg~s~Gl~~g~~--~aG~~~~~~~avd~~~~A~~t~~~N~p~~~v~~~~~ 396 (718)
..+|||+-||.|+.+.-|...++ ..+.++ .+||+++.+++..+...++..++..|+
T Consensus 82 ~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V---~gvD~s~~~l~~a~~~~~~v~~~~gD~ 139 (236)
T 2bm8_A 82 PRTIVELGVYNGGSLAWFRDLTKIMGIDCQV---IGIDRDLSRCQIPASDMENITLHQGDC 139 (236)
T ss_dssp CSEEEEECCTTSHHHHHHHHHHHHTTCCCEE---EEEESCCTTCCCCGGGCTTEEEEECCS
T ss_pred CCEEEEEeCCCCHHHHHHHHhhhhcCCCCEE---EEEeCChHHHHHHhccCCceEEEECcc
Confidence 45899999999999988743211 124554 599999987654442234556655544
No 282
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=58.60 E-value=4.7 Score=37.89 Aligned_cols=35 Identities=20% Similarity=0.118 Sum_probs=26.4
Q ss_pred cccceeccccccchhhHhHhhhhhhcC----------CeeEeEEeecccHH
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAG----------LNLVTRWAVDINEY 377 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG----------~~~~~~~avd~~~~ 377 (718)
...+||||.||.|+++.-|. +..| .++ ++||+++.
T Consensus 22 ~~~~vLDlGcG~G~~~~~la---~~~~~~~~~~~~~~~~v---~~vD~s~~ 66 (196)
T 2nyu_A 22 PGLRVLDCGAAPGAWSQVAV---QKVNAAGTDPSSPVGFV---LGVDLLHI 66 (196)
T ss_dssp TTCEEEEETCCSCHHHHHHH---HHTTTTCCCTTSCCCEE---EEECSSCC
T ss_pred CCCEEEEeCCCCCHHHHHHH---HHhccccccccCCCceE---EEEechhc
Confidence 35689999999999998884 3334 343 59999983
No 283
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=58.55 E-value=4.3 Score=40.19 Aligned_cols=58 Identities=17% Similarity=0.066 Sum_probs=36.1
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHH-HH---HH-----hhCCCceeecCchHH
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYAC-QS---LK-----LNHPETEVRNESAED 398 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~-~t---~~-----~N~p~~~v~~~~~~~ 398 (718)
....+|||+=||.|.++.-|.. ...|.++ .+||+++.+. +. -+ .+.++..++..|+++
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~--~~~~~~v---~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~ 89 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAI--NDQNTFY---IGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAES 89 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHH--TCTTEEE---EEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTB
T ss_pred CCCCEEEEEeccCcHHHHHHHH--hCCCCEE---EEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHH
Confidence 3456899999999998887721 1345554 4999994443 21 12 233556666665543
No 284
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=58.00 E-value=4.6 Score=45.76 Aligned_cols=45 Identities=11% Similarity=0.077 Sum_probs=32.3
Q ss_pred ceeccccccchhhHhHhhhhhhc----C-------CeeEeEEeecccHHHHHHHHhh
Q 047980 340 KLLDLYSGCGAMSTGLCLGANLA----G-------LNLVTRWAVDINEYACQSLKLN 385 (718)
Q Consensus 340 ~~lDLFsG~Gg~s~Gl~~g~~~a----G-------~~~~~~~avd~~~~A~~t~~~N 385 (718)
+|+|.+||.|||-+.+..-+... + .. ...+++|+|+.++..-+.|
T Consensus 247 ~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~-~~i~G~Eid~~~~~lA~~N 302 (544)
T 3khk_A 247 RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQ-ISVYGQESNPTTWKLAAMN 302 (544)
T ss_dssp EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGG-EEEEECCCCHHHHHHHHHH
T ss_pred eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhh-ceEEEEeCCHHHHHHHHHH
Confidence 89999999999987763222111 1 01 2348999999999988877
No 285
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=57.56 E-value=9.7 Score=38.37 Aligned_cols=48 Identities=15% Similarity=0.156 Sum_probs=35.8
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCC
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHP 387 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p 387 (718)
+...+||||-||.|.++.-|. ...|-.= .++|||+++...+.++.+..
T Consensus 76 kpG~~VldlG~G~G~~~~~la---~~VG~~G-~V~avD~s~~~~~~l~~~a~ 123 (233)
T 4df3_A 76 KEGDRILYLGIASGTTASHMS---DIIGPRG-RIYGVEFAPRVMRDLLTVVR 123 (233)
T ss_dssp CTTCEEEEETCTTSHHHHHHH---HHHCTTC-EEEEEECCHHHHHHHHHHST
T ss_pred CCCCEEEEecCcCCHHHHHHH---HHhCCCc-eEEEEeCCHHHHHHHHHhhH
Confidence 566799999999999998884 3333221 12699999999988877753
No 286
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=57.43 E-value=2.5 Score=38.45 Aligned_cols=54 Identities=15% Similarity=0.013 Sum_probs=35.8
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCCCceeecCchHHH
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDF 399 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p~~~v~~~~~~~~ 399 (718)
....++||+.||.|+++.-+...+ ..+.++ .++|+++ ... .++..+...|+.++
T Consensus 21 ~~~~~vLd~G~G~G~~~~~l~~~~-~~~~~v---~~~D~~~-~~~-----~~~~~~~~~d~~~~ 74 (180)
T 1ej0_A 21 KPGMTVVDLGAAPGGWSQYVVTQI-GGKGRI---IACDLLP-MDP-----IVGVDFLQGDFRDE 74 (180)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHH-CTTCEE---EEEESSC-CCC-----CTTEEEEESCTTSH
T ss_pred CCCCeEEEeCCCCCHHHHHHHHHh-CCCCeE---EEEECcc-ccc-----cCcEEEEEcccccc
Confidence 345589999999999988773210 124554 5999998 543 25667777776543
No 287
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=56.58 E-value=5.7 Score=47.25 Aligned_cols=46 Identities=22% Similarity=0.237 Sum_probs=33.1
Q ss_pred cccceeccccccchhhHhHhhhhhhcC-CeeEeEEeecccHHHHHHH--Hhh
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAG-LNLVTRWAVDINEYACQSL--KLN 385 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG-~~~~~~~avd~~~~A~~t~--~~N 385 (718)
...+++|.+||.|+|...+.. ..+ ..-...+|+|+|+.|+... +.|
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA~---~l~ei~~~~IyGvEIDp~Al~LAK~RlN 369 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVSA---GFNNVMPRQIWANDIETLFLELLSIRLG 369 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHHH---TSTTCCGGGEEEECSCGGGHHHHHHHHH
T ss_pred CCCEEEECCCCccHHHHHHHH---HhcccCCCeEEEEECCHHHHHHHHHHHH
Confidence 467899999999999887732 222 1112347999999998877 665
No 288
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=55.74 E-value=12 Score=40.06 Aligned_cols=57 Identities=18% Similarity=0.215 Sum_probs=43.4
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhh--CCCceeecCchHH
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLN--HPETEVRNESAED 398 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N--~p~~~v~~~~~~~ 398 (718)
...+||++.-|.|+++..|.. +..+-++ .|||+|+.-+..++.. +++.+++++|+-+
T Consensus 58 ~~~~VlEIGPG~G~LT~~Ll~--~~~~~~v---vavE~D~~l~~~L~~~~~~~~l~ii~~D~l~ 116 (353)
T 1i4w_A 58 EELKVLDLYPGVGIQSAIFYN--KYCPRQY---SLLEKRSSLYKFLNAKFEGSPLQILKRDPYD 116 (353)
T ss_dssp TTCEEEEESCTTCHHHHHHHH--HHCCSEE---EEECCCHHHHHHHHHHTTTSSCEEECSCTTC
T ss_pred CCCEEEEECCCCCHHHHHHHh--hCCCCEE---EEEecCHHHHHHHHHhccCCCEEEEECCccc
Confidence 357899999999999999942 1123455 4999999998888764 4678888988833
No 289
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=55.55 E-value=6.6 Score=45.91 Aligned_cols=50 Identities=22% Similarity=0.230 Sum_probs=33.9
Q ss_pred cccceeccccccchhhHhHhhhhhh--cCCee-----------------------------------EeEEeecccHHHH
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANL--AGLNL-----------------------------------VTRWAVDINEYAC 379 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~--aG~~~-----------------------------------~~~~avd~~~~A~ 379 (718)
....+||+|||.|++.....+-+.. .|+.- ..++++|+|+.|.
T Consensus 190 ~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~av 269 (703)
T 3v97_A 190 PGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVI 269 (703)
T ss_dssp TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHHHH
T ss_pred CCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHHHH
Confidence 4568999999999988765432110 01100 1347999999999
Q ss_pred HHHHhhC
Q 047980 380 QSLKLNH 386 (718)
Q Consensus 380 ~t~~~N~ 386 (718)
+.-+.|-
T Consensus 270 ~~A~~N~ 276 (703)
T 3v97_A 270 QRARTNA 276 (703)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9888883
No 290
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=55.18 E-value=7 Score=41.12 Aligned_cols=45 Identities=20% Similarity=0.183 Sum_probs=33.0
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccH---HHHHHHHhhCC
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINE---YACQSLKLNHP 387 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~---~A~~t~~~N~p 387 (718)
...-.|||.|||.|..... +.+.|-+.+ +||+++ ..++.-+.+.-
T Consensus 241 ~~~~~vlDpF~GsGtt~~a----a~~~~r~~i---g~e~~~~~~~~~~~~~~Rl~ 288 (319)
T 1eg2_A 241 HPGSTVLDFFAGSGVTARV----AIQEGRNSI---CTDAAPVFKEYYQKQLTFLQ 288 (319)
T ss_dssp CTTCEEEETTCTTCHHHHH----HHHHTCEEE---EEESSTHHHHHHHHHHHHC-
T ss_pred CCCCEEEecCCCCCHHHHH----HHHcCCcEE---EEECCccHHHHHHHHHHHHH
Confidence 3455799999999944433 366788875 999999 88887776653
No 291
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=55.11 E-value=9.6 Score=36.75 Aligned_cols=46 Identities=15% Similarity=0.158 Sum_probs=35.9
Q ss_pred ccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCCCceeecCch
Q 047980 338 DVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESA 396 (718)
Q Consensus 338 ~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p~~~v~~~~~ 396 (718)
..++||+-||.|.++.-|. .. .++|+++.+++..+.+ +..++..|+
T Consensus 48 ~~~vLDiG~G~G~~~~~l~----~~-------~~vD~s~~~~~~a~~~--~~~~~~~d~ 93 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLK----IK-------IGVEPSERMAEIARKR--GVFVLKGTA 93 (219)
T ss_dssp SSCEEEETCTTSTTHHHHT----CC-------EEEESCHHHHHHHHHT--TCEEEECBT
T ss_pred CCcEEEeCCCCCHHHHHHH----HH-------hccCCCHHHHHHHHhc--CCEEEEccc
Confidence 5689999999999887772 22 4999999999988887 555655554
No 292
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=55.01 E-value=6.5 Score=40.06 Aligned_cols=44 Identities=14% Similarity=-0.031 Sum_probs=33.7
Q ss_pred ccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCCC
Q 047980 338 DVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPE 388 (718)
Q Consensus 338 ~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p~ 388 (718)
..+|||+-||.|+++.-+. +. | .-+ .+||+|+...+..+.+++.
T Consensus 73 ~~~VL~iG~G~G~~~~~ll---~~-~-~~v--~~veid~~~i~~ar~~~~~ 116 (262)
T 2cmg_A 73 LKEVLIVDGFDLELAHQLF---KY-D-THI--DFVQADEKILDSFISFFPH 116 (262)
T ss_dssp CCEEEEESSCCHHHHHHHT---TS-S-CEE--EEECSCHHHHGGGTTTSTT
T ss_pred CCEEEEEeCCcCHHHHHHH---hC-C-CEE--EEEECCHHHHHHHHHHHHh
Confidence 4589999999999887762 33 5 333 5999999999888777653
No 293
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=53.10 E-value=12 Score=33.38 Aligned_cols=50 Identities=22% Similarity=0.224 Sum_probs=38.3
Q ss_pred cccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCCCceeecCchHH
Q 047980 344 LYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAED 398 (718)
Q Consensus 344 LFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p~~~v~~~~~~~ 398 (718)
+.+|+|.+...+...+...|++++ ++|.|+..++.++.. +..++..|+.+
T Consensus 10 ~I~G~G~iG~~la~~L~~~g~~V~---~id~~~~~~~~~~~~--~~~~~~gd~~~ 59 (141)
T 3llv_A 10 IVIGSEAAGVGLVRELTAAGKKVL---AVDKSKEKIELLEDE--GFDAVIADPTD 59 (141)
T ss_dssp EEECCSHHHHHHHHHHHHTTCCEE---EEESCHHHHHHHHHT--TCEEEECCTTC
T ss_pred EEECCCHHHHHHHHHHHHCCCeEE---EEECCHHHHHHHHHC--CCcEEECCCCC
Confidence 456899988888888888999875 899999998887754 45556555543
No 294
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=49.41 E-value=9.9 Score=39.45 Aligned_cols=44 Identities=18% Similarity=0.110 Sum_probs=34.9
Q ss_pred ccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC
Q 047980 338 DVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH 386 (718)
Q Consensus 338 ~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~ 386 (718)
+-+||||=||-|=+++.+. ...+- .++||+|||+.+++..+.|.
T Consensus 133 p~~VLDLGCG~GpLAl~~~---~~~p~--a~y~a~DId~~~le~a~~~l 176 (281)
T 3lcv_B 133 PNTLRDLACGLNPLAAPWM---GLPAE--TVYIASDIDARLVGFVDEAL 176 (281)
T ss_dssp CSEEEETTCTTGGGCCTTT---TCCTT--CEEEEEESBHHHHHHHHHHH
T ss_pred CceeeeeccCccHHHHHHH---hhCCC--CEEEEEeCCHHHHHHHHHHH
Confidence 6699999999999998882 22222 23589999999999998884
No 295
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=48.67 E-value=19 Score=35.51 Aligned_cols=57 Identities=18% Similarity=0.201 Sum_probs=40.1
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCC----CceeecCchHHH
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHP----ETEVRNESAEDF 399 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p----~~~v~~~~~~~~ 399 (718)
...+|||+=||.|..+.-| ...+..-+ .+||+++...+..+.+.. ...++..+++++
T Consensus 60 ~G~rVLdiG~G~G~~~~~~----~~~~~~~v--~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~ 120 (236)
T 3orh_A 60 KGGRVLEVGFGMAIAASKV----QEAPIDEH--WIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDV 120 (236)
T ss_dssp TCEEEEEECCTTSHHHHHH----TTSCEEEE--EEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHH
T ss_pred CCCeEEEECCCccHHHHHH----HHhCCcEE--EEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhh
Confidence 4568999999999888766 33333323 699999998888777643 445666666654
No 296
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=47.24 E-value=13 Score=37.21 Aligned_cols=44 Identities=14% Similarity=0.026 Sum_probs=33.3
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhh
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLN 385 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N 385 (718)
....+||||=||.|.++.-+ ...|+.-+ .|+|+++.+.+..+.+
T Consensus 54 ~~g~~vLDiGCG~G~~~~~~----~~~~~~~v--~g~D~s~~~l~~a~~~ 97 (263)
T 2a14_A 54 LQGDTLIDIGSGPTIYQVLA----ACDSFQDI--TLSDFTDRNREELEKW 97 (263)
T ss_dssp CCEEEEEESSCTTCCGGGTT----GGGTEEEE--EEEESCHHHHHHHHHH
T ss_pred CCCceEEEeCCCccHHHHHH----HHhhhcce--eeccccHHHHHHHHHH
Confidence 45678999999998666543 45676544 5999999999987765
No 297
>2b2y_A CHD-1, chromodomain-helicase-DNA-binding protein 1; three stranded antiparallel beta sheet, alpha helix linker, peptide binding protein; 2.35A {Homo sapiens} SCOP: b.34.13.2 b.34.13.2 PDB: 2b2u_A* 2b2v_A* 2b2w_A 2b2t_A*
Probab=46.37 E-value=4.9 Score=39.29 Aligned_cols=47 Identities=23% Similarity=0.396 Sum_probs=33.0
Q ss_pred hhHHHHHHHHhHhcCCchhhhcccceeeEeeccCCCCCCCCcccccc
Q 047980 451 SEIFEVEKILKICYGDPKEIKKRGLYLKVRWRNYGPSEDTWEPIEGL 497 (718)
Q Consensus 451 ~~~~~v~~l~~i~~g~p~~~~~~~l~~~~~w~~~~~~~d~w~~~~~~ 497 (718)
..+|.|+++++-.........+....|-|.|+|+...+.||+|..+|
T Consensus 34 ~~~y~VE~i~d~~~~ld~r~~~~~~eYlVKWkg~s~~h~tWe~~~~L 80 (187)
T 2b2y_A 34 TTIYAVEADGDPNAGFEKNKEPGEIQYLIKWKGWSHIHNTWETEETL 80 (187)
T ss_dssp SSHHHHHHHCCTTTTCC-CCSCCEEEEEEEETTSCGGGCEEECHHHH
T ss_pred ceeEEeeccCCcccccCccccCCcEEEEEEECCCCcccCeeCCHHHh
Confidence 34688998753222212234456778999999999999999998764
No 298
>2h1e_A Chromo domain protein 1; CHD1, tandem chromodomains, three-stranded ANT B-sheet, hydrolase; 2.20A {Saccharomyces cerevisiae} PDB: 2dy7_A 2dy8_A
Probab=43.73 E-value=4.7 Score=39.08 Aligned_cols=36 Identities=31% Similarity=0.562 Sum_probs=29.8
Q ss_pred cccceeeEeeccCCCCCCCCccccccc-ccccchhhh
Q 047980 472 KRGLYLKVRWRNYGPSEDTWEPIEGLS-NCGEKIKEF 507 (718)
Q Consensus 472 ~~~l~~~~~w~~~~~~~d~w~~~~~~~-~~~~~i~e~ 507 (718)
...+.+-|.|+|++.++.||++..++. .|+..|.+|
T Consensus 138 ~~~~~YLVKWkgl~y~e~TWE~~~~~~~~~~~~I~~y 174 (177)
T 2h1e_A 138 TSQLQYLVKWRRLNYDEATWENATDIVKLAPEQVKHF 174 (177)
T ss_dssp CEEEEEEEEETTSCSTTCEEEEHHHHHHHCHHHHHHH
T ss_pred CCcEEEEEEeCCCCcccccccChHHhhhhHHHHHHHH
Confidence 345778899999999999999998876 377777766
No 299
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=41.04 E-value=9.7 Score=38.84 Aligned_cols=33 Identities=18% Similarity=0.158 Sum_probs=24.9
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccH
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINE 376 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~ 376 (718)
+...+||||-||.||++.-+. .. .+| .|||+++
T Consensus 73 ~~g~~VLDlGcGtG~~s~~la----~~-~~V---~gvD~s~ 105 (265)
T 2oxt_A 73 ELTGRVVDLGCGRGGWSYYAA----SR-PHV---MDVRAYT 105 (265)
T ss_dssp CCCEEEEEESCTTSHHHHHHH----TS-TTE---EEEEEEC
T ss_pred CCCCEEEEeCcCCCHHHHHHH----Hc-CcE---EEEECch
Confidence 345689999999999997773 23 344 5999987
No 300
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=40.78 E-value=9.9 Score=39.63 Aligned_cols=48 Identities=19% Similarity=0.221 Sum_probs=33.6
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCCCce
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETE 390 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p~~~ 390 (718)
...++||+=||.|+++.-| .+.|..-| +|||+++...+.-..++|...
T Consensus 85 ~g~~vLDiGcGTG~~t~~L----~~~ga~~V--~aVDvs~~mL~~a~r~~~rv~ 132 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVM----LQNGAKLV--YAVDVGTNQLVWKLRQDDRVR 132 (291)
T ss_dssp TTCEEEEETCTTSHHHHHH----HHTTCSEE--EEECSSSSCSCHHHHTCTTEE
T ss_pred cccEEEecCCCccHHHHHH----HhCCCCEE--EEEECCHHHHHHHHHhCcccc
Confidence 4568999999999999776 44565434 699999876554334555543
No 301
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=40.12 E-value=21 Score=33.45 Aligned_cols=48 Identities=25% Similarity=0.265 Sum_probs=36.2
Q ss_pred cccccchhhHhHhhhhhhc-CCeeEeEEeecccHHHHHHHHhhCCCceeecCch
Q 047980 344 LYSGCGAMSTGLCLGANLA-GLNLVTRWAVDINEYACQSLKLNHPETEVRNESA 396 (718)
Q Consensus 344 LFsG~Gg~s~Gl~~g~~~a-G~~~~~~~avd~~~~A~~t~~~N~p~~~v~~~~~ 396 (718)
+.+|+|.+...+...+... |++++ ++|.|+..++.++.. +..++..|.
T Consensus 43 ~IiG~G~~G~~~a~~L~~~~g~~V~---vid~~~~~~~~~~~~--g~~~~~gd~ 91 (183)
T 3c85_A 43 LILGMGRIGTGAYDELRARYGKISL---GIEIREEAAQQHRSE--GRNVISGDA 91 (183)
T ss_dssp EEECCSHHHHHHHHHHHHHHCSCEE---EEESCHHHHHHHHHT--TCCEEECCT
T ss_pred EEECCCHHHHHHHHHHHhccCCeEE---EEECCHHHHHHHHHC--CCCEEEcCC
Confidence 4569999999888878888 99875 899999988887754 444544444
No 302
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=39.24 E-value=45 Score=35.63 Aligned_cols=64 Identities=20% Similarity=0.130 Sum_probs=46.8
Q ss_pred ccccceeccccccchhhHhHhhhhhhcC--CeeEeEEeecccHHHHHHHHhhC-CCceeecCchHHHHHHHHH
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAG--LNLVTRWAVDINEYACQSLKLNH-PETEVRNESAEDFLTLLRE 405 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG--~~~~~~~avd~~~~A~~t~~~N~-p~~~v~~~~~~~~l~~lke 405 (718)
+..-.+||.-+|.||-|..|. +..| .+| +|+|.|+.|.+.-+.-+ ....+++.+-.++..+|++
T Consensus 56 ~pggiyVD~TlG~GGHS~~iL---~~lg~~GrV---ig~D~Dp~Al~~A~rL~~~Rv~lv~~nF~~l~~~L~~ 122 (347)
T 3tka_A 56 RPDGIYIDGTFGRGGHSRLIL---SQLGEEGRL---LAIDRDPQAIAVAKTIDDPRFSIIHGPFSALGEYVAE 122 (347)
T ss_dssp CTTCEEEESCCTTSHHHHHHH---TTCCTTCEE---EEEESCHHHHHHHTTCCCTTEEEEESCGGGHHHHHHH
T ss_pred CCCCEEEEeCcCCCHHHHHHH---HhCCCCCEE---EEEECCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHHh
Confidence 445689999999999999984 3333 333 69999999998764212 3456788888888777766
No 303
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=39.14 E-value=11 Score=38.76 Aligned_cols=33 Identities=21% Similarity=0.185 Sum_probs=24.9
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccH
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINE 376 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~ 376 (718)
+...+||||-||.|+++.-+. ..| +| .|||+++
T Consensus 81 ~~g~~VLDlGcGtG~~s~~la----~~~-~V---~gVD~s~ 113 (276)
T 2wa2_A 81 ELKGTVVDLGCGRGSWSYYAA----SQP-NV---REVKAYT 113 (276)
T ss_dssp CCCEEEEEESCTTCHHHHHHH----TST-TE---EEEEEEC
T ss_pred CCCCEEEEeccCCCHHHHHHH----HcC-CE---EEEECch
Confidence 345689999999999998773 233 44 5999986
No 304
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=39.04 E-value=10 Score=37.73 Aligned_cols=36 Identities=28% Similarity=0.366 Sum_probs=26.5
Q ss_pred ccccceeccccccchhhHhHhhhhhhcC--CeeEeEEeecccHH
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAG--LNLVTRWAVDINEY 377 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG--~~~~~~~avd~~~~ 377 (718)
....+|||+-||.|.++.-+. +..| .++ .++|+++.
T Consensus 42 ~~~~~vLDiGcG~G~~~~~l~---~~~g~~~~v---~gvD~s~~ 79 (275)
T 3bkx_A 42 KPGEKILEIGCGQGDLSAVLA---DQVGSSGHV---TGIDIASP 79 (275)
T ss_dssp CTTCEEEEESCTTSHHHHHHH---HHHCTTCEE---EEECSSCT
T ss_pred CCCCEEEEeCCCCCHHHHHHH---HHhCCCCEE---EEEECCcc
Confidence 345689999999999988773 2224 454 49999875
No 305
>2b2y_A CHD-1, chromodomain-helicase-DNA-binding protein 1; three stranded antiparallel beta sheet, alpha helix linker, peptide binding protein; 2.35A {Homo sapiens} SCOP: b.34.13.2 b.34.13.2 PDB: 2b2u_A* 2b2v_A* 2b2w_A 2b2t_A*
Probab=38.20 E-value=4.8 Score=39.36 Aligned_cols=36 Identities=22% Similarity=0.267 Sum_probs=29.6
Q ss_pred ccceeeEeeccCCCCCCCCccccccc-ccccchhhhh
Q 047980 473 RGLYLKVRWRNYGPSEDTWEPIEGLS-NCGEKIKEFV 508 (718)
Q Consensus 473 ~~l~~~~~w~~~~~~~d~w~~~~~~~-~~~~~i~e~~ 508 (718)
..+.+.|.|+|+..++.||++..++. +|+..|.+|.
T Consensus 147 g~~~yLVKWkgl~Y~e~TWE~~~~i~~~~~~~I~~f~ 183 (187)
T 2b2y_A 147 GYPDYYCKWQGLPYSECSWEDGALISKKFQACIDEYF 183 (187)
T ss_dssp SCEEEEEEETTSCGGGCEEECHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEEECCCChhhCcccchhhhhhhHHHHHHHHH
Confidence 35678999999999999999998765 6777777773
No 306
>2m0o_A PHD finger protein 1; tudor domain, H3K36ME3 binding, peptide binding protein; HET: M3L; NMR {Homo sapiens}
Probab=37.86 E-value=28 Score=29.03 Aligned_cols=28 Identities=18% Similarity=0.037 Sum_probs=25.1
Q ss_pred EEecCCeEEEecCCCCCCeEEEEeEEeec
Q 047980 188 TYDLFDDAHVKAESGEEDYICKIVEMFEA 216 (718)
Q Consensus 188 ~y~vGD~VyV~~~~~~p~yIgrI~~iwe~ 216 (718)
.|.+|+.|+++-.|+.- |.|.|.++-..
T Consensus 26 ~f~eGeDVLarwsDGlf-YLGTI~kV~~~ 53 (79)
T 2m0o_A 26 RLWEGQDVLARWTDGLL-YLGTIKKVDSA 53 (79)
T ss_dssp CCCTTCEEEBCCTTSCC-CEEEEEEEETT
T ss_pred eeccCCEEEEEecCCCE-EeEEEEEeccC
Confidence 79999999999998875 99999998765
No 307
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=37.80 E-value=39 Score=29.41 Aligned_cols=49 Identities=20% Similarity=0.352 Sum_probs=34.8
Q ss_pred cccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCCCceeecCch
Q 047980 344 LYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESA 396 (718)
Q Consensus 344 LFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p~~~v~~~~~ 396 (718)
+..|+|.+...+...+...|.++. .+|.++..++.+..++ +..++..|.
T Consensus 8 ~IiG~G~iG~~~a~~L~~~g~~v~---~~d~~~~~~~~~~~~~-~~~~~~~d~ 56 (140)
T 1lss_A 8 IIAGIGRVGYTLAKSLSEKGHDIV---LIDIDKDICKKASAEI-DALVINGDC 56 (140)
T ss_dssp EEECCSHHHHHHHHHHHHTTCEEE---EEESCHHHHHHHHHHC-SSEEEESCT
T ss_pred EEECCCHHHHHHHHHHHhCCCeEE---EEECCHHHHHHHHHhc-CcEEEEcCC
Confidence 345999998888877888898864 7899998887776554 333444433
No 308
>2ee1_A Chromodomain helicase-DNA-binding protein 4; EC 3.6.1.-, ATP- dependent helicase CHD4, CHD-4, MI-2 autoantigen 218 kDa protein, MI2-beta; NMR {Homo sapiens}
Probab=37.18 E-value=11 Score=30.38 Aligned_cols=22 Identities=18% Similarity=0.605 Sum_probs=19.4
Q ss_pred cceeeEeeccCCCCCCCCcccc
Q 047980 474 GLYLKVRWRNYGPSEDTWEPIE 495 (718)
Q Consensus 474 ~l~~~~~w~~~~~~~d~w~~~~ 495 (718)
.+.+-|.|+++..++.||++.+
T Consensus 27 ~~eYLVKWkgl~y~e~TWE~~~ 48 (64)
T 2ee1_A 27 HVHYLIKWRDLPYDQASWESED 48 (64)
T ss_dssp CEEEEECCTTSCTTTCEEEETT
T ss_pred CEEEEEEEcCCCcccCcccCCc
Confidence 4567799999999999999976
No 309
>2dpm_A M.dpnii 1, protein (adenine-specific methyltransferase dpnii 1); DNA adenine methyltransferase, methylase; HET: SAM; 1.80A {Streptococcus pneumoniae} SCOP: c.66.1.28
Probab=37.04 E-value=35 Score=35.22 Aligned_cols=38 Identities=16% Similarity=0.144 Sum_probs=29.2
Q ss_pred cceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhh
Q 047980 339 VKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLN 385 (718)
Q Consensus 339 ~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N 385 (718)
-+.+|.|+|.|++...+ . . ..+ +.+|+|+.-...|+.-
T Consensus 37 ~~yvEpF~GggaV~~~~----~-~--~~~--i~ND~n~~Lin~y~~i 74 (284)
T 2dpm_A 37 NRYFEPFVGGGALFFDL----A-P--KDA--VINDFNAELINCYQQI 74 (284)
T ss_dssp SCEEETTCTTCHHHHHH----C-C--SEE--EEEESCHHHHHHHHHH
T ss_pred CEEEeecCCccHHHHhh----h-c--cce--eeeecchHHHHHHHHH
Confidence 47999999999887765 2 1 222 6999999999998643
No 310
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=36.21 E-value=23 Score=36.24 Aligned_cols=45 Identities=18% Similarity=0.212 Sum_probs=33.0
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH 386 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~ 386 (718)
....++||+-||.|.++.-+... ..+.++ .++|++ .+++..+.+.
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~--~p~~~~---~~~D~~-~~~~~a~~~~ 208 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQH--NPNAEI---FGVDWA-SVLEVAKENA 208 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHH--CTTCEE---EEEECH-HHHHHHHHHH
T ss_pred CCCCEEEEECCCcCHHHHHHHHH--CCCCeE---EEEecH-HHHHHHHHHH
Confidence 45679999999999998877421 125555 499999 8877777663
No 311
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=35.29 E-value=28 Score=37.09 Aligned_cols=43 Identities=12% Similarity=0.105 Sum_probs=35.7
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhh
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLN 385 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N 385 (718)
....+|||+=||.|.+..-| ...|+++ .++|+++.+.+..+.+
T Consensus 106 ~~~~~VLDiGcG~G~~~~~l----~~~g~~v---~gvD~s~~~~~~a~~~ 148 (416)
T 4e2x_A 106 GPDPFIVEIGCNDGIMLRTI----QEAGVRH---LGFEPSSGVAAKAREK 148 (416)
T ss_dssp SSSCEEEEETCTTTTTHHHH----HHTTCEE---EEECCCHHHHHHHHTT
T ss_pred CCCCEEEEecCCCCHHHHHH----HHcCCcE---EEECCCHHHHHHHHHc
Confidence 35679999999999988877 5578865 4999999999887776
No 312
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=35.09 E-value=29 Score=38.98 Aligned_cols=49 Identities=10% Similarity=0.081 Sum_probs=33.2
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCe--------eEeEEeecccHHHHHHHHhh
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLN--------LVTRWAVDINEYACQSLKLN 385 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~--------~~~~~avd~~~~A~~t~~~N 385 (718)
..-+|+|-+||.|||-+..-.-+...+-. -...+++|+|+.+...-+.|
T Consensus 217 ~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mN 273 (530)
T 3ufb_A 217 LGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMN 273 (530)
T ss_dssp TTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHH
T ss_pred CCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHH
Confidence 34489999999999977653322222211 12348999999998877776
No 313
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=34.98 E-value=32 Score=33.20 Aligned_cols=52 Identities=8% Similarity=0.093 Sum_probs=40.4
Q ss_pred cccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCCCceeecCchHHH
Q 047980 344 LYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDF 399 (718)
Q Consensus 344 LFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p~~~v~~~~~~~~ 399 (718)
+.+|+|-+...+...+...|.+++ .+|.|+..++.+.... +..++..|+.+.
T Consensus 4 iIiG~G~~G~~la~~L~~~g~~v~---vid~~~~~~~~l~~~~-~~~~i~gd~~~~ 55 (218)
T 3l4b_C 4 IIIGGETTAYYLARSMLSRKYGVV---IINKDRELCEEFAKKL-KATIIHGDGSHK 55 (218)
T ss_dssp EEECCHHHHHHHHHHHHHTTCCEE---EEESCHHHHHHHHHHS-SSEEEESCTTSH
T ss_pred EEECCCHHHHHHHHHHHhCCCeEE---EEECCHHHHHHHHHHc-CCeEEEcCCCCH
Confidence 467999888888887888999875 8999999998876553 456677777653
No 314
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=34.03 E-value=34 Score=35.69 Aligned_cols=45 Identities=18% Similarity=0.186 Sum_probs=33.0
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH 386 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~ 386 (718)
....+|||+-||.|.++.-|... ..+.++ .++|+ +.+++..+.|.
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~~~--~~~~~~---~~~D~-~~~~~~a~~~~ 225 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIALR--APHLRG---TLVEL-AGPAERARRRF 225 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHH--CTTCEE---EEEEC-HHHHHHHHHHH
T ss_pred CCCCEEEEECCCcCHHHHHHHHH--CCCCEE---EEEeC-HHHHHHHHHHH
Confidence 34579999999999998888421 124554 48999 88888777664
No 315
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=33.96 E-value=40 Score=39.50 Aligned_cols=61 Identities=20% Similarity=0.198 Sum_probs=43.4
Q ss_pred cccceeccccccchhhHh-HhhhhhhcC---------CeeEeEEeecccHHHHHHHHhh----CC-CceeecCchHHH
Q 047980 337 MDVKLLDLYSGCGAMSTG-LCLGANLAG---------LNLVTRWAVDINEYACQSLKLN----HP-ETEVRNESAEDF 399 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~G-l~~g~~~aG---------~~~~~~~avd~~~~A~~t~~~N----~p-~~~v~~~~~~~~ 399 (718)
+...|+|+=||-|-++.- |+ +++.|| ..+ .++|||.|+.|..+++.. +. ..+|+.+|++++
T Consensus 409 ~~~VVldVGaGtGpLs~~al~-A~~~a~~~~~~~~~~~~~-kVyAVEknp~A~~~l~~~~~Ng~~d~VtVI~gd~eev 484 (745)
T 3ua3_A 409 KTVVIYLLGGGRGPIGTKILK-SEREYNNTFRQGQESLKV-KLYIVEKNPNAIVTLKYMNVRTWKRRVTIIESDMRSL 484 (745)
T ss_dssp SEEEEEEESCTTCHHHHHHHH-HHHHHHHHHSTTSCCCEE-EEEEEECCHHHHHHHHHHHHHTTTTCSEEEESCGGGH
T ss_pred CCcEEEEECCCCCHHHHHHHH-HHHHhCcccccccccccc-EEEEEeCChHHHHHHHHHHhcCCCCeEEEEeCchhhc
Confidence 356899999999999863 32 223345 332 358999999998776643 33 388889999886
No 316
>4hcz_A PHD finger protein 1; protein-peptide complex, tudor, histone binding, H3K36ME3, N nucleus, transcription; HET: M3L; 1.85A {Homo sapiens}
Probab=32.83 E-value=52 Score=26.02 Aligned_cols=28 Identities=18% Similarity=0.023 Sum_probs=24.1
Q ss_pred EEecCCeEEEecCCCCCCeEEEEeEEeec
Q 047980 188 TYDLFDDAHVKAESGEEDYICKIVEMFEA 216 (718)
Q Consensus 188 ~y~vGD~VyV~~~~~~p~yIgrI~~iwe~ 216 (718)
.+.+|+.|+++-.++. +|.|.|+++-..
T Consensus 3 ~f~~GedVLarwsDG~-fYlGtI~~V~~~ 30 (58)
T 4hcz_A 3 RLWEGQDVLARWTDGL-LYLGTIKKVDSA 30 (58)
T ss_dssp SCCTTCEEEEECTTSC-EEEEEEEEEETT
T ss_pred ccccCCEEEEEecCCC-EEeEEEEEEecC
Confidence 4789999999999866 599999999765
No 317
>1x87_A Urocanase protein; structural genomics, protein STR initiative, MCSG, PSI, midwest center for structural genomi; HET: MSE NAD; 2.40A {Geobacillus stearothermophilus} SCOP: e.51.1.1
Probab=32.24 E-value=70 Score=35.68 Aligned_cols=63 Identities=16% Similarity=0.259 Sum_probs=46.3
Q ss_pred eccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCCCceeecCchHHHHHHHHHHHH
Q 047980 342 LDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWEK 408 (718)
Q Consensus 342 lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p~~~v~~~~~~~~l~~lke~~~ 408 (718)
|=|=||.||||=.=-+++..+|.-.+ .+|+|+.+++.- +...-......|+++.+.++++..+
T Consensus 164 ~~lTaGLGGMgGAQplA~~mag~v~i---~~Evd~~ri~~R-~~~gyld~~~~~ldeal~~~~~a~~ 226 (551)
T 1x87_A 164 ITLTAGLGGMGGAQPLAVTMNGGVCL---AIEVDPARIQRR-IDTNYLDTMTDSLDAALEMAKQAKE 226 (551)
T ss_dssp EEEEECCSTTGGGHHHHHHHTTCEEE---EEESCHHHHHHH-HHTTSCSEEESCHHHHHHHHHHHHH
T ss_pred EEEEecCCccchhhHHHHHHcCceEE---EEEECHHHHHHH-HhCCCceeEcCCHHHHHHHHHHHHH
Confidence 45679999999555577788997554 899999998753 2333344557789999988888754
No 318
>1uwk_A Urocanate hydratase; hydrolase, urocanase, imidazolonepropionate, histidine metabolism, lyase; HET: NAD URO; 1.19A {Pseudomonas putida} SCOP: e.51.1.1 PDB: 1w1u_A* 1uwl_A* 2v7g_A*
Probab=32.20 E-value=67 Score=35.88 Aligned_cols=63 Identities=19% Similarity=0.228 Sum_probs=46.5
Q ss_pred eccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCCCceeecCchHHHHHHHHHHHH
Q 047980 342 LDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWEK 408 (718)
Q Consensus 342 lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p~~~v~~~~~~~~l~~lke~~~ 408 (718)
|=|=||.||||=.=-+++..+|.-.+ .+|+|+.+++.- +...-......|+++.+.++++..+
T Consensus 169 ~~lTaGLGGMgGAQplA~~mag~v~i---~~Evd~~ri~~R-~~~gyld~~~~~ldeal~~~~~a~~ 231 (557)
T 1uwk_A 169 WVLTAGLGGMGGAQPLAATLAGACSL---NIESQQSRIDFR-LETRYVDEQATDLDDALVRIAKYTA 231 (557)
T ss_dssp EEEEECCSTTTTHHHHHHHHTTCEEE---EEESCHHHHHHH-HHTTSCCEECSSHHHHHHHHHHHHH
T ss_pred EEEEecCCccchhhHHHHHHcCceEE---EEEECHHHHHHH-HhCCCceeEcCCHHHHHHHHHHHHH
Confidence 45679999999555577788997554 899999998753 2333344567889999988888754
No 319
>2fkn_A Urocanate hydratase; rossman fold, lyase; HET: NAD; 2.20A {Bacillus subtilis}
Probab=31.41 E-value=68 Score=35.79 Aligned_cols=63 Identities=21% Similarity=0.252 Sum_probs=46.3
Q ss_pred eccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCCCceeecCchHHHHHHHHHHHH
Q 047980 342 LDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLREWEK 408 (718)
Q Consensus 342 lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p~~~v~~~~~~~~l~~lke~~~ 408 (718)
|=|=||.||||=.=-+++..+|.-.+ .+|+|+.+++.- +...-......|+++.+.++++..+
T Consensus 165 ~~lTaGLGGMgGAQplA~~mag~v~i---~~Evd~~ri~~R-~~~gyld~~~~~ldeal~~~~~a~~ 227 (552)
T 2fkn_A 165 LTLTAGLGGMGGAQPLSVTMNEGVVI---AVEVDEKRIDKR-IETKYCDRKTASIEEALAWAEEAKL 227 (552)
T ss_dssp EEEEECCSTTTTHHHHHHHHTTCEEE---EEESCHHHHHHH-HHTTSCSEEESCHHHHHHHHHHHHH
T ss_pred EEEEecCCccchhhHHHHHHcCceEE---EEEECHHHHHHH-HhCCcceeEcCCHHHHHHHHHHHHH
Confidence 45679999999555577788997554 899999998753 2333344567789999988888754
No 320
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=31.35 E-value=16 Score=34.56 Aligned_cols=37 Identities=16% Similarity=0.156 Sum_probs=30.4
Q ss_pred cccceeccccccc-hhhHhHhhhhh-hcCCeeEeEEeecccHHHHH
Q 047980 337 MDVKLLDLYSGCG-AMSTGLCLGAN-LAGLNLVTRWAVDINEYACQ 380 (718)
Q Consensus 337 ~~~~~lDLFsG~G-g~s~Gl~~g~~-~aG~~~~~~~avd~~~~A~~ 380 (718)
...++|++=||-| -.+.-| + ..|++|+ |+|+++.|+.
T Consensus 35 ~~~rVlEVG~G~g~~vA~~L----a~~~g~~V~---atDInp~Av~ 73 (153)
T 2k4m_A 35 PGTRVVEVGAGRFLYVSDYI----RKHSKVDLV---LTDIKPSHGG 73 (153)
T ss_dssp SSSEEEEETCTTCCHHHHHH----HHHSCCEEE---EECSSCSSTT
T ss_pred CCCcEEEEccCCChHHHHHH----HHhCCCeEE---EEECCccccc
Confidence 3569999999988 477666 4 4999986 9999999988
No 321
>2eqj_A Metal-response element-binding transcription factor 2; structure genomics,tudor domain, zinc-regulated factor 1, ZIRF1; NMR {Mus musculus}
Probab=31.33 E-value=50 Score=26.86 Aligned_cols=34 Identities=12% Similarity=0.124 Sum_probs=26.6
Q ss_pred EEecCCeEEEecCCCCCCeEEEEeEEeecCCCceEE
Q 047980 188 TYDLFDDAHVKAESGEEDYICKIVEMFEAVDGTPYF 223 (718)
Q Consensus 188 ~y~vGD~VyV~~~~~~p~yIgrI~~iwe~~~g~~~v 223 (718)
.|.+||.|+..=.++. +|.|.|.++.+.. |...|
T Consensus 13 ~f~vGddVLA~wtDGl-~Y~gtI~~V~~~~-gtC~V 46 (66)
T 2eqj_A 13 KFEEGQDVLARWSDGL-FYLGTIKKINILK-QSCFI 46 (66)
T ss_dssp CSCTTCEEEEECTTSC-EEEEEEEEEETTT-TEEEE
T ss_pred cccCCCEEEEEEccCc-EEEeEEEEEccCC-cEEEE
Confidence 5899999999887766 4999999998753 44433
No 322
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=31.03 E-value=38 Score=33.95 Aligned_cols=45 Identities=20% Similarity=-0.034 Sum_probs=31.4
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCC
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHP 387 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p 387 (718)
...+||||=||.|.++.=+ +...|.++ .+||+++.+.+..+.+..
T Consensus 71 ~~~~vLDiGcG~G~~~~l~---~~~~~~~v---~gvD~s~~~l~~a~~~~~ 115 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLS---ACSHFEDI---TMTDFLEVNRQELGRWLQ 115 (289)
T ss_dssp CCSEEEEETCTTCCGGGTT---GGGGCSEE---EEECSCHHHHHHHHHHHT
T ss_pred CCCeEEEECCCcChHHHHh---hccCCCeE---EEeCCCHHHHHHHHHHHh
Confidence 4568999999999843222 12235554 499999999988777643
No 323
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=30.96 E-value=66 Score=28.73 Aligned_cols=41 Identities=12% Similarity=0.074 Sum_probs=31.7
Q ss_pred cccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCC
Q 047980 344 LYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHP 387 (718)
Q Consensus 344 LFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p 387 (718)
++-|+|+|...+...+...|++ + ..+|.++...+.+...+.
T Consensus 25 ~iiG~G~iG~~~a~~l~~~g~~-v--~v~~r~~~~~~~~a~~~~ 65 (144)
T 3oj0_A 25 LLVGNGMLASEIAPYFSYPQYK-V--TVAGRNIDHVRAFAEKYE 65 (144)
T ss_dssp EEECCSHHHHHHGGGCCTTTCE-E--EEEESCHHHHHHHHHHHT
T ss_pred EEECCCHHHHHHHHHHHhCCCE-E--EEEcCCHHHHHHHHHHhC
Confidence 3568999999988888888988 5 467888887777666654
No 324
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=30.56 E-value=36 Score=34.85 Aligned_cols=47 Identities=11% Similarity=0.126 Sum_probs=31.7
Q ss_pred cccceeccccccchhhHhHhhhhhhc------CCeeEeEEeecccHHHHHHHHhhC
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLA------GLNLVTRWAVDINEYACQSLKLNH 386 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~a------G~~~~~~~avd~~~~A~~t~~~N~ 386 (718)
..++++|+=||.|--..-+.+-+... |+++ .|+|+++.+.+.-+.|.
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I---~atDis~~~L~~Ar~~~ 157 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKV---FASDIDTEVLEKARSGI 157 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEE---EEEESCHHHHHHHHHTE
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEE---EEEECCHHHHHHHHhcC
Confidence 46899999999997322121111211 3544 69999999999988873
No 325
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=30.46 E-value=74 Score=31.96 Aligned_cols=51 Identities=20% Similarity=0.256 Sum_probs=41.7
Q ss_pred cccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCCCceeecCchHHH
Q 047980 346 SGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDF 399 (718)
Q Consensus 346 sG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p~~~v~~~~~~~~ 399 (718)
.|.+|+..++++.+...|.+|+ .+|.++...+......++...+..|+.+-
T Consensus 9 Gas~GIG~aia~~la~~Ga~V~---~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~ 59 (247)
T 3ged_A 9 GGGHGIGKQICLDFLEAGDKVC---FIDIDEKRSADFAKERPNLFYFHGDVADP 59 (247)
T ss_dssp STTSHHHHHHHHHHHHTTCEEE---EEESCHHHHHHHHTTCTTEEEEECCTTSH
T ss_pred cCCCHHHHHHHHHHHHCCCEEE---EEeCCHHHHHHHHHhcCCEEEEEecCCCH
Confidence 5677888888888899999986 78999998888888888877777776654
No 326
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=28.62 E-value=74 Score=26.57 Aligned_cols=48 Identities=15% Similarity=0.144 Sum_probs=34.2
Q ss_pred cccchhhHhHhhhhhhcC-CeeEeEEeecccHHHHHHHHhhCCCceeecCchHH
Q 047980 346 SGCGAMSTGLCLGANLAG-LNLVTRWAVDINEYACQSLKLNHPETEVRNESAED 398 (718)
Q Consensus 346 sG~Gg~s~Gl~~g~~~aG-~~~~~~~avd~~~~A~~t~~~N~p~~~v~~~~~~~ 398 (718)
-|+|++...+...+...| .++ .++|.++...+.+. .++..+...|+.+
T Consensus 11 ~G~G~iG~~~~~~l~~~g~~~v---~~~~r~~~~~~~~~--~~~~~~~~~d~~~ 59 (118)
T 3ic5_A 11 VGAGKIGQMIAALLKTSSNYSV---TVADHDLAALAVLN--RMGVATKQVDAKD 59 (118)
T ss_dssp ECCSHHHHHHHHHHHHCSSEEE---EEEESCHHHHHHHH--TTTCEEEECCTTC
T ss_pred ECCCHHHHHHHHHHHhCCCceE---EEEeCCHHHHHHHH--hCCCcEEEecCCC
Confidence 377999988888888889 665 48899988877766 3455555555543
No 327
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=28.45 E-value=46 Score=33.98 Aligned_cols=43 Identities=14% Similarity=0.210 Sum_probs=34.4
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH 386 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~ 386 (718)
..+-+||||=||.|=++..+ . .+..+ +|+|||+.+++..+.|.
T Consensus 104 ~~p~~VLDlGCG~gpLal~~----~-~~~~y---~a~DId~~~i~~ar~~~ 146 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYE----R-GIASV---WGCDIHQGLGDVITPFA 146 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHH----T-TCSEE---EEEESBHHHHHHHHHHH
T ss_pred CCCCeEEEecCCccHHHHHh----c-cCCeE---EEEeCCHHHHHHHHHHH
Confidence 45679999999999998887 3 33433 69999999999988873
No 328
>2h1e_A Chromo domain protein 1; CHD1, tandem chromodomains, three-stranded ANT B-sheet, hydrolase; 2.20A {Saccharomyces cerevisiae} PDB: 2dy7_A 2dy8_A
Probab=27.27 E-value=14 Score=35.81 Aligned_cols=38 Identities=16% Similarity=0.469 Sum_probs=30.5
Q ss_pred cccceeeEeeccCCCCCCCCcccccccccccc--hhhhhh
Q 047980 472 KRGLYLKVRWRNYGPSEDTWEPIEGLSNCGEK--IKEFVT 509 (718)
Q Consensus 472 ~~~l~~~~~w~~~~~~~d~w~~~~~~~~~~~~--i~e~~~ 509 (718)
+....|-|.|+|+-.-|.||++..+|..|+.. |..|..
T Consensus 44 ~~~~EYlVKWKg~Sy~HnTWe~ee~L~~~~glkKl~nf~k 83 (177)
T 2h1e_A 44 KENYEFLIKWTDESHLHNTWETYESIGQVRGLKRLDNYCK 83 (177)
T ss_dssp HHHEEEEEEETTSCGGGCEEECHHHHCSCTTHHHHHHHHH
T ss_pred CCceEEEEEECCCccccCeecCHHHHhhchHHHHHHHHHH
Confidence 44567899999999999999999998877765 555544
No 329
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=26.98 E-value=54 Score=29.60 Aligned_cols=51 Identities=18% Similarity=0.193 Sum_probs=37.1
Q ss_pred ccccchhhHhHhhhhhhcCCeeEeEEeeccc-HHHHHHHHhhCC-CceeecCchHH
Q 047980 345 YSGCGAMSTGLCLGANLAGLNLVTRWAVDIN-EYACQSLKLNHP-ETEVRNESAED 398 (718)
Q Consensus 345 FsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~-~~A~~t~~~N~p-~~~v~~~~~~~ 398 (718)
-+|+|.+...+...+...|++++ .+|.+ +..++.+...++ +..++..|+.+
T Consensus 8 I~G~G~vG~~la~~L~~~g~~V~---vid~~~~~~~~~~~~~~~~~~~~i~gd~~~ 60 (153)
T 1id1_A 8 VCGHSILAINTILQLNQRGQNVT---VISNLPEDDIKQLEQRLGDNADVIPGDSND 60 (153)
T ss_dssp EECCSHHHHHHHHHHHHTTCCEE---EEECCCHHHHHHHHHHHCTTCEEEESCTTS
T ss_pred EECCCHHHHHHHHHHHHCCCCEE---EEECCChHHHHHHHHhhcCCCeEEEcCCCC
Confidence 45899888888877788899876 78887 566666655443 56777777654
No 330
>3zzs_A Transcription attenuation protein MTRB; transcription regulation, protein engineering; HET: TRP; 1.49A {Geobacillus stearothermophilus} SCOP: b.82.5.1 PDB: 3zzq_A* 3zzl_A*
Probab=26.46 E-value=1.1e+02 Score=24.42 Aligned_cols=47 Identities=15% Similarity=0.156 Sum_probs=37.7
Q ss_pred EEEEEEEecccCccccccccCCCCceEeeCCccccccccccceeEEEe
Q 047980 223 FTAQWYYRARDTVIESNAHLIDQRRVFFSEIQNDNPLECLVKKLNIAR 270 (718)
Q Consensus 223 v~v~WFyRpeET~~~~~~~~~d~rELF~S~~~d~~~l~~I~gKC~V~~ 270 (718)
|+|-=+-|..||..+ +...-|+.||.+....+-.++-.|+||+.|+.
T Consensus 13 V~VigltRg~dtkfh-htEkLdkGEVmiaQftehtsaiKiRGkA~i~t 59 (65)
T 3zzs_A 13 VNVIGLTRGADTRFH-HSEKLDKGEVLIAQFTEHTSAIKVRGKAYIQT 59 (65)
T ss_dssp EEEEC-CCSSSCCCC-CEEEECTTCEEEEECCSSCSEEEEESSEEEEE
T ss_pred eEEEEeeccCCccch-hhhccCCCcEEEEEeecceeEEEEeceEEEEe
Confidence 555556688888634 35567899999999999999999999999986
No 331
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=26.24 E-value=41 Score=35.10 Aligned_cols=44 Identities=18% Similarity=0.225 Sum_probs=32.0
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhh
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLN 385 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N 385 (718)
....++||+-||.|.++.-|.. ...+.++ .++|+ +.+++..+.|
T Consensus 189 ~~~~~vLDvG~G~G~~~~~l~~--~~p~~~~---~~~D~-~~~~~~a~~~ 232 (359)
T 1x19_A 189 DGVKKMIDVGGGIGDISAAMLK--HFPELDS---TILNL-PGAIDLVNEN 232 (359)
T ss_dssp TTCCEEEEESCTTCHHHHHHHH--HCTTCEE---EEEEC-GGGHHHHHHH
T ss_pred CCCCEEEEECCcccHHHHHHHH--HCCCCeE---EEEec-HHHHHHHHHH
Confidence 3456899999999999988842 1125555 48999 8777776665
No 332
>2xk0_A Polycomb protein PCL; transcription, aromatic CAGE; NMR {Drosophila melanogaster}
Probab=25.81 E-value=75 Score=25.97 Aligned_cols=24 Identities=33% Similarity=0.667 Sum_probs=20.6
Q ss_pred EEecCCeEEEecCCCCCCeEEEEeE
Q 047980 188 TYDLFDDAHVKAESGEEDYICKIVE 212 (718)
Q Consensus 188 ~y~vGD~VyV~~~~~~p~yIgrI~~ 212 (718)
.|.+|+.|+++=.|+. +|.|.|+.
T Consensus 15 ~~~~geDVL~rw~DG~-fYLGtIVd 38 (69)
T 2xk0_A 15 TYALQEDVFIKCNDGR-FYLGTIID 38 (69)
T ss_dssp CCCTTCEEEEECTTSC-EEEEEEEE
T ss_pred ccccCCeEEEEecCCC-EEEEEEEe
Confidence 6999999999987755 69999965
No 333
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=25.09 E-value=31 Score=35.78 Aligned_cols=31 Identities=26% Similarity=0.122 Sum_probs=22.9
Q ss_pred ccccceeccccccchhhHhHhhhhhhcCCeeEeEEeecc
Q 047980 336 KMDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDI 374 (718)
Q Consensus 336 ~~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~ 374 (718)
+...+||||-||.||++.-| ...| +| .+||+
T Consensus 81 ~~g~~VLDlGcG~G~~s~~l----a~~~-~V---~gvD~ 111 (305)
T 2p41_A 81 TPEGKVVDLGCGRGGWSYYC----GGLK-NV---REVKG 111 (305)
T ss_dssp CCCEEEEEETCTTSHHHHHH----HTST-TE---EEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHH----HhcC-CE---EEEec
Confidence 34579999999999998776 2334 33 48988
No 334
>2a7y_A Hypothetical protein RV2302/MT2359; anti-parallel beta sheet, structural genomics, PSI, protein structure initiative; NMR {Mycobacterium tuberculosis} SCOP: b.34.6.3
Probab=24.30 E-value=61 Score=27.46 Aligned_cols=39 Identities=28% Similarity=0.467 Sum_probs=32.0
Q ss_pred EecCCeEEEecCC-CCCCeEEEEeEEeecCCCceEEEEEEE
Q 047980 189 YDLFDDAHVKAES-GEEDYICKIVEMFEAVDGTPYFTAQWY 228 (718)
Q Consensus 189 y~vGD~VyV~~~~-~~p~yIgrI~~iwe~~~g~~~v~v~WF 228 (718)
-.+||.+.|.+.. +.+...|.|+++-.. +|..=+.|+|+
T Consensus 6 A~vGDrlvv~g~~vg~~~R~GeIvEV~g~-dG~PPY~VRw~ 45 (83)
T 2a7y_A 6 AKVGDYLVVKGTTTERHDQHAEIIEVRSA-DGSPPYVVRWL 45 (83)
T ss_dssp CCTTEEEEESCTTTSCCEEEEEEEECSCS-SSCSCEEEEET
T ss_pred ccCCCEEEEecCcCCCCCcEEEEEEEECC-CCCCCEEEEec
Confidence 4689999999987 788899999998765 56666779994
No 335
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=23.83 E-value=72 Score=35.06 Aligned_cols=56 Identities=20% Similarity=0.156 Sum_probs=43.3
Q ss_pred ccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCCCceeecCchHHHHHHHHH
Q 047980 345 YSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDFLTLLRE 405 (718)
Q Consensus 345 FsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p~~~v~~~~~~~~l~~lke 405 (718)
-||+|-+..-++.-+...|.+++ .||.|+.+++.+..++ +..++.+|+.+. ..|++
T Consensus 8 I~G~G~vG~~la~~L~~~~~~v~---vId~d~~~~~~~~~~~-~~~~i~Gd~~~~-~~L~~ 63 (461)
T 4g65_A 8 ILGAGQVGGTLAENLVGENNDIT---IVDKDGDRLRELQDKY-DLRVVNGHASHP-DVLHE 63 (461)
T ss_dssp EECCSHHHHHHHHHTCSTTEEEE---EEESCHHHHHHHHHHS-SCEEEESCTTCH-HHHHH
T ss_pred EECCCHHHHHHHHHHHHCCCCEE---EEECCHHHHHHHHHhc-CcEEEEEcCCCH-HHHHh
Confidence 58999888777776777898876 8999999999888776 567778888764 34444
No 336
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=23.22 E-value=56 Score=33.03 Aligned_cols=57 Identities=21% Similarity=0.076 Sum_probs=38.4
Q ss_pred ccceecccccc---chhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC---CCceeecCchHHH
Q 047980 338 DVKLLDLYSGC---GAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH---PETEVRNESAEDF 399 (718)
Q Consensus 338 ~~~~lDLFsG~---Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~---p~~~v~~~~~~~~ 399 (718)
..++|||=||. |.+..-+.. ...|.++ .+||+++...+.-+.+. +.+.++..|+.+.
T Consensus 78 ~~~vLDlGcG~pt~G~~~~~~~~--~~p~~~v---~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~ 140 (274)
T 2qe6_A 78 ISQFLDLGSGLPTVQNTHEVAQS--VNPDARV---VYVDIDPMVLTHGRALLAKDPNTAVFTADVRDP 140 (274)
T ss_dssp CCEEEEETCCSCCSSCHHHHHHH--HCTTCEE---EEEESSHHHHHHHHHHHTTCTTEEEEECCTTCH
T ss_pred CCEEEEECCCCCCCChHHHHHHH--hCCCCEE---EEEECChHHHHHHHHhcCCCCCeEEEEeeCCCc
Confidence 35899998888 765433310 1135665 49999999888777665 4567777777553
No 337
>1yf3_A DNA adenine methylase; T4DAM, methyltransferase, transferase-DNA complex; HET: DNA SAH; 2.29A {Enterobacteria phage T4} SCOP: c.66.1.28 PDB: 1yfj_A* 1yfl_A* 1q0s_A* 1q0t_A*
Probab=23.01 E-value=44 Score=33.83 Aligned_cols=38 Identities=29% Similarity=0.305 Sum_probs=29.7
Q ss_pred cceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC
Q 047980 339 VKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH 386 (718)
Q Consensus 339 ~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~ 386 (718)
-+.+|.|+|.|++...+ . . + + +.+|+|+.-...|+.--
T Consensus 26 ~~yvEpF~GggaV~~~~----~-~--~-~--viNDin~~li~~~~~i~ 63 (259)
T 1yf3_A 26 NRFVDLFCGGLSVSLNV----N-G--P-V--LANDIQEPIIEMYKRLI 63 (259)
T ss_dssp SEEEETTCTTCTTGGGS----C-S--S-E--EEECSCHHHHHHHHHHT
T ss_pred CeEEEecCCccHHHHhc----c-c--c-E--EEecCChHHHHHHHHHH
Confidence 47999999999887655 2 2 3 3 68999999999888653
No 338
>2g1p_A DNA adenine methylase; DAM methylation, GATC recognition, base flipping, bacterial factor, transferase-DNA complex; HET: DNA SAH; 1.89A {Escherichia coli} PDB: 2ore_D*
Probab=22.86 E-value=56 Score=33.48 Aligned_cols=38 Identities=16% Similarity=0.141 Sum_probs=28.7
Q ss_pred cceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhh
Q 047980 339 VKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLN 385 (718)
Q Consensus 339 ~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N 385 (718)
-+.+|.|+|.|++...+ . . +.+ +.+|+|+.-...|+.-
T Consensus 29 ~~yvEpF~Ggg~V~~~~----~--~-~~~--i~ND~n~~lin~y~~i 66 (278)
T 2g1p_A 29 ECLVEPFVGAGSVFLNT----D--F-SRY--ILADINSDLISLYNIV 66 (278)
T ss_dssp SEEEETTCTTCHHHHTC----C--C-SEE--EEEESCHHHHHHHHHH
T ss_pred CeEEeeccCccHHHHhh----c--c-cce--EEEeccHHHHHHHHHH
Confidence 47999999999887654 1 2 222 6999999999887754
No 339
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=21.91 E-value=51 Score=36.07 Aligned_cols=56 Identities=14% Similarity=0.234 Sum_probs=39.8
Q ss_pred ccccceeccccc------cchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCCCceeecCchHHH
Q 047980 336 KMDVKLLDLYSG------CGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDF 399 (718)
Q Consensus 336 ~~~~~~lDLFsG------~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p~~~v~~~~~~~~ 399 (718)
....+||||=|| .||.++-+.... .-+.++ .+||+++.. ..+.++..++..|+.++
T Consensus 215 ~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~-fP~a~V---~GVDiSp~m----~~~~~rI~fv~GDa~dl 276 (419)
T 3sso_A 215 NQQVRVLEIGVGGYKHPEWGGGSLRMWKSF-FPRGQI---YGLDIMDKS----HVDELRIRTIQGDQNDA 276 (419)
T ss_dssp TSCCEEEEECCSCTTCSSCCCHHHHHHHHH-CTTCEE---EEEESSCCG----GGCBTTEEEEECCTTCH
T ss_pred CCCCEEEEEecCCCcCCCCCHHHHHHHHHh-CCCCEE---EEEECCHHH----hhcCCCcEEEEeccccc
Confidence 356799999999 578777663211 024454 599999986 24678889999999874
No 340
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=21.31 E-value=50 Score=34.26 Aligned_cols=44 Identities=9% Similarity=0.115 Sum_probs=31.0
Q ss_pred cccceeccccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhC
Q 047980 337 MDVKLLDLYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNH 386 (718)
Q Consensus 337 ~~~~~lDLFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~ 386 (718)
...+|||+-||.|.++.-|... ..++++ .++|+ +.+++..+.|.
T Consensus 183 ~~~~vLDvG~G~G~~~~~l~~~--~~~~~~---~~~D~-~~~~~~a~~~~ 226 (360)
T 1tw3_A 183 NVRHVLDVGGGKGGFAAAIARR--APHVSA---TVLEM-AGTVDTARSYL 226 (360)
T ss_dssp TCSEEEEETCTTSHHHHHHHHH--CTTCEE---EEEEC-TTHHHHHHHHH
T ss_pred cCcEEEEeCCcCcHHHHHHHHh--CCCCEE---EEecC-HHHHHHHHHHH
Confidence 4568999999999999887321 123443 48888 87777766653
No 341
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=21.23 E-value=1.4e+02 Score=29.03 Aligned_cols=53 Identities=19% Similarity=0.246 Sum_probs=41.2
Q ss_pred cccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCCCceeecCchHHH
Q 047980 344 LYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAEDF 399 (718)
Q Consensus 344 LFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p~~~v~~~~~~~~ 399 (718)
+-.|.||+...++..+...|.+|+ .++.+....+......++..++..|+.+.
T Consensus 7 VTGas~gIG~~ia~~l~~~G~~V~---~~~r~~~~~~~~~~~~~~~~~~~~Dv~~~ 59 (247)
T 3dii_A 7 VTGGGHGIGKQICLDFLEAGDKVC---FIDIDEKRSADFAKERPNLFYFHGDVADP 59 (247)
T ss_dssp EESTTSHHHHHHHHHHHHTTCEEE---EEESCHHHHHHHHTTCTTEEEEECCTTSH
T ss_pred EECCCCHHHHHHHHHHHHCCCEEE---EEeCCHHHHHHHHHhcccCCeEEeeCCCH
Confidence 456778888888888888999875 68899888887777777766666676553
No 342
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=20.69 E-value=65 Score=34.91 Aligned_cols=50 Identities=16% Similarity=0.130 Sum_probs=39.6
Q ss_pred cccccchhhHhHhhhhhhcCCeeEeEEeecccHHHHHHHHhhCCCceeecCchHH
Q 047980 344 LYSGCGAMSTGLCLGANLAGLNLVTRWAVDINEYACQSLKLNHPETEVRNESAED 398 (718)
Q Consensus 344 LFsG~Gg~s~Gl~~g~~~aG~~~~~~~avd~~~~A~~t~~~N~p~~~v~~~~~~~ 398 (718)
+-+|+|-+..-+..-+...|++++ +||.|+..++.++.. +..++.+|+.+
T Consensus 8 iIiG~Gr~G~~va~~L~~~g~~vv---vId~d~~~v~~~~~~--g~~vi~GDat~ 57 (413)
T 3l9w_A 8 IIAGFGRFGQITGRLLLSSGVKMV---VLDHDPDHIETLRKF--GMKVFYGDATR 57 (413)
T ss_dssp EEECCSHHHHHHHHHHHHTTCCEE---EEECCHHHHHHHHHT--TCCCEESCTTC
T ss_pred EEECCCHHHHHHHHHHHHCCCCEE---EEECCHHHHHHHHhC--CCeEEEcCCCC
Confidence 468999988888888888999876 899999999988743 45566666655
Done!