Query 047983
Match_columns 233
No_of_seqs 101 out of 1291
Neff 9.0
Searched_HMMs 46136
Date Fri Mar 29 05:07:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047983.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/047983hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0259 Tyrosine aminotransfer 100.0 1.8E-37 3.8E-42 258.6 21.1 215 1-232 222-437 (447)
2 PLN00145 tyrosine/nicotianamin 100.0 1.8E-34 3.9E-39 255.7 22.3 216 1-233 213-429 (430)
3 COG0436 Aspartate/tyrosine/aro 100.0 7.4E-35 1.6E-39 254.6 18.9 202 1-229 186-392 (393)
4 PLN02187 rooty/superroot1 100.0 1.4E-33 3.1E-38 251.8 21.1 215 1-232 227-442 (462)
5 PLN02656 tyrosine transaminase 100.0 2.3E-32 5.1E-37 240.9 20.9 215 1-233 192-408 (409)
6 PLN00143 tyrosine/nicotianamin 100.0 4.1E-32 9E-37 239.3 22.0 214 1-232 193-408 (409)
7 TIGR01265 tyr_nico_aTase tyros 100.0 3.7E-31 7.9E-36 232.9 22.1 211 1-230 192-403 (403)
8 TIGR01264 tyr_amTase_E tyrosin 100.0 8E-31 1.7E-35 230.6 21.1 207 2-229 192-400 (401)
9 PTZ00433 tyrosine aminotransfe 100.0 1.7E-30 3.7E-35 229.3 22.2 210 1-231 200-411 (412)
10 PRK06855 aminotransferase; Val 100.0 3.5E-30 7.6E-35 228.6 20.8 208 1-229 194-430 (433)
11 PRK06107 aspartate aminotransf 100.0 6.2E-30 1.3E-34 225.1 19.4 203 2-229 190-401 (402)
12 PRK08636 aspartate aminotransf 100.0 1.3E-29 2.9E-34 223.0 21.0 203 1-231 198-403 (403)
13 PLN00175 aminotransferase fami 100.0 7.3E-30 1.6E-34 225.3 18.9 196 2-227 211-412 (413)
14 PRK06207 aspartate aminotransf 100.0 1.3E-29 2.7E-34 223.3 20.3 200 2-230 202-404 (405)
15 PRK07324 transaminase; Validat 100.0 9.5E-30 2.1E-34 221.8 19.1 197 1-230 176-372 (373)
16 COG1167 ARO8 Transcriptional r 100.0 1E-29 2.2E-34 226.5 19.4 200 2-231 251-458 (459)
17 PRK13355 bifunctional HTH-doma 100.0 2.4E-29 5.3E-34 227.7 20.8 207 1-230 304-516 (517)
18 PRK07366 succinyldiaminopimela 100.0 1.7E-29 3.6E-34 221.3 17.4 197 1-226 188-388 (388)
19 PRK09148 aminotransferase; Val 100.0 4.6E-29 9.9E-34 219.8 19.8 202 2-231 189-393 (405)
20 PRK06348 aspartate aminotransf 100.0 3.4E-29 7.3E-34 219.1 18.8 195 1-225 185-382 (384)
21 COG1168 MalY Bifunctional PLP- 100.0 3.6E-29 7.7E-34 209.9 17.5 198 2-228 182-386 (388)
22 PRK05957 aspartate aminotransf 100.0 6.7E-29 1.5E-33 217.6 20.0 197 2-230 184-387 (389)
23 PLN02607 1-aminocyclopropane-1 100.0 8.6E-29 1.9E-33 220.1 20.2 202 1-231 223-440 (447)
24 PTZ00377 alanine aminotransfer 100.0 1.1E-28 2.5E-33 221.6 20.5 207 1-232 241-479 (481)
25 PRK09082 methionine aminotrans 100.0 2.5E-29 5.4E-34 220.1 15.8 195 1-224 186-385 (386)
26 PRK07681 aspartate aminotransf 100.0 8.5E-29 1.8E-33 217.6 18.8 193 1-224 189-384 (399)
27 PRK07682 hypothetical protein; 100.0 4.6E-29 1E-33 217.7 16.6 198 1-229 177-377 (378)
28 PRK12414 putative aminotransfe 100.0 1.2E-28 2.5E-33 215.8 18.6 194 1-224 185-383 (384)
29 PLN02231 alanine transaminase 100.0 2E-28 4.2E-33 221.6 20.6 208 1-231 294-530 (534)
30 PLN02376 1-aminocyclopropane-1 100.0 2.4E-28 5.2E-33 219.6 21.0 203 1-230 222-440 (496)
31 PRK07590 L,L-diaminopimelate a 100.0 1.1E-28 2.4E-33 217.6 18.3 206 1-225 199-408 (409)
32 PRK08912 hypothetical protein; 100.0 1.6E-28 3.5E-33 215.0 19.1 199 2-228 183-386 (387)
33 PRK09265 aminotransferase AlaT 100.0 3.5E-28 7.6E-33 214.0 20.9 208 1-230 191-403 (404)
34 PLN02450 1-aminocyclopropane-1 100.0 3.2E-28 7E-33 217.7 20.9 203 1-230 214-432 (468)
35 PRK08960 hypothetical protein; 100.0 2.4E-28 5.1E-33 214.0 19.5 195 2-227 189-386 (387)
36 PRK07568 aspartate aminotransf 100.0 4.3E-28 9.3E-33 212.8 21.1 199 1-232 185-396 (397)
37 PRK07309 aromatic amino acid a 100.0 2.5E-28 5.3E-33 214.2 19.5 201 1-231 189-391 (391)
38 PRK08175 aminotransferase; Val 100.0 2.6E-28 5.7E-33 214.3 18.8 200 1-228 187-389 (395)
39 PRK08068 transaminase; Reviewe 100.0 2.8E-28 6.2E-33 213.6 18.6 193 2-225 191-386 (389)
40 PRK07683 aminotransferase A; V 100.0 5.8E-28 1.3E-32 211.5 20.5 199 2-231 185-386 (387)
41 TIGR03540 DapC_direct LL-diami 100.0 4.9E-28 1.1E-32 211.6 19.6 193 1-224 187-382 (383)
42 PRK09147 succinyldiaminopimela 100.0 2.9E-28 6.3E-33 214.0 18.0 192 1-227 189-395 (396)
43 PRK08363 alanine aminotransfer 100.0 5.9E-28 1.3E-32 212.2 19.9 205 1-231 189-397 (398)
44 KOG0257 Kynurenine aminotransf 100.0 2.3E-29 5E-34 213.0 10.4 198 1-223 195-414 (420)
45 PRK07777 aminotransferase; Val 100.0 7E-28 1.5E-32 210.9 19.3 197 1-226 182-384 (387)
46 PRK09276 LL-diaminopimelate am 100.0 4.5E-28 9.7E-33 212.0 17.9 193 1-224 189-384 (385)
47 PRK08361 aspartate aminotransf 100.0 2.8E-28 6.1E-33 213.8 16.7 199 1-228 189-390 (391)
48 PRK06108 aspartate aminotransf 100.0 8.1E-28 1.8E-32 209.9 19.3 197 1-227 181-381 (382)
49 PRK07337 aminotransferase; Val 100.0 1.1E-27 2.4E-32 209.7 19.1 199 1-226 186-387 (388)
50 PRK05764 aspartate aminotransf 100.0 2.3E-27 4.9E-32 208.0 20.8 204 1-229 187-392 (393)
51 PRK09275 aspartate aminotransf 100.0 6.7E-28 1.5E-32 216.3 16.7 211 1-231 264-520 (527)
52 PRK05942 aspartate aminotransf 100.0 1.1E-27 2.3E-32 210.3 17.7 194 2-226 194-390 (394)
53 TIGR03542 DAPAT_plant LL-diami 100.0 1.7E-27 3.8E-32 209.5 18.6 198 1-225 196-401 (402)
54 PRK05839 hypothetical protein; 100.0 2.5E-27 5.4E-32 206.7 17.8 186 1-227 178-373 (374)
55 TIGR03538 DapC_gpp succinyldia 100.0 2.5E-27 5.4E-32 207.9 17.6 190 1-225 188-392 (393)
56 KOG0634 Aromatic amino acid am 100.0 3.5E-27 7.7E-32 200.0 17.5 206 1-232 227-470 (472)
57 TIGR03801 asp_4_decarbox aspar 100.0 2.9E-27 6.2E-32 211.9 16.4 209 1-231 263-519 (521)
58 PRK15481 transcriptional regul 100.0 5.2E-27 1.1E-31 208.3 17.6 189 2-227 236-430 (431)
59 PRK07550 hypothetical protein; 99.9 1.9E-26 4.1E-31 201.8 19.6 195 1-225 186-384 (386)
60 PRK07865 N-succinyldiaminopime 99.9 1.5E-26 3.2E-31 201.1 18.7 188 1-223 171-363 (364)
61 PF00155 Aminotran_1_2: Aminot 99.9 1.4E-26 2.9E-31 200.8 15.7 187 2-222 172-363 (363)
62 TIGR03539 DapC_actino succinyl 99.9 3.1E-26 6.8E-31 198.6 17.8 186 2-222 166-356 (357)
63 PRK06358 threonine-phosphate d 99.9 2.6E-26 5.5E-31 199.0 16.7 187 1-226 164-353 (354)
64 PRK09440 avtA valine--pyruvate 99.9 7.6E-26 1.7E-30 199.9 19.4 201 1-232 202-415 (416)
65 TIGR03537 DapC succinyldiamino 99.9 4.3E-26 9.4E-31 197.2 16.9 189 1-224 159-349 (350)
66 PRK06290 aspartate aminotransf 99.9 6.3E-26 1.4E-30 200.0 17.5 199 1-229 202-406 (410)
67 PLN02672 methionine S-methyltr 99.9 1.2E-25 2.6E-30 213.4 18.9 201 1-227 852-1079(1082)
68 PRK06836 aspartate aminotransf 99.9 2.2E-25 4.7E-30 195.7 18.7 195 1-231 191-394 (394)
69 PRK06425 histidinol-phosphate 99.9 1.6E-25 3.6E-30 192.3 16.9 184 2-226 146-331 (332)
70 PRK07392 threonine-phosphate d 99.9 1.5E-25 3.2E-30 194.5 16.2 185 1-223 168-357 (360)
71 PLN02397 aspartate transaminas 99.9 3.3E-25 7.1E-30 196.2 17.4 188 1-227 217-420 (423)
72 PRK09257 aromatic amino acid a 99.9 7E-25 1.5E-29 192.6 15.5 186 1-225 195-395 (396)
73 PTZ00376 aspartate aminotransf 99.9 8.5E-25 1.8E-29 192.6 15.5 187 1-227 199-402 (404)
74 PRK04781 histidinol-phosphate 99.9 1E-24 2.2E-29 189.6 15.2 180 3-223 177-358 (364)
75 PRK07908 hypothetical protein; 99.9 5E-24 1.1E-28 184.2 17.8 184 1-226 159-345 (349)
76 PRK08056 threonine-phosphate d 99.9 2.9E-24 6.3E-29 186.2 15.4 184 2-225 166-352 (356)
77 PRK03158 histidinol-phosphate 99.9 2.3E-24 5E-29 186.9 14.4 184 2-225 172-358 (359)
78 PRK14809 histidinol-phosphate 99.9 3.8E-24 8.2E-29 185.5 15.6 178 2-227 178-356 (357)
79 PRK08637 hypothetical protein; 99.9 1.2E-23 2.6E-28 184.4 17.9 198 1-229 169-387 (388)
80 PRK05664 threonine-phosphate d 99.9 2.8E-23 6.2E-28 178.3 18.5 177 2-227 148-327 (330)
81 PRK06225 aspartate aminotransf 99.9 4.2E-23 9.2E-28 180.3 19.2 194 2-231 181-379 (380)
82 PRK06959 putative threonine-ph 99.9 5.6E-23 1.2E-27 177.1 19.2 181 2-230 154-335 (339)
83 COG3977 Alanine-alpha-ketoisov 99.9 7.2E-23 1.6E-27 166.9 17.6 197 2-231 203-414 (417)
84 KOG0256 1-aminocyclopropane-1- 99.9 7.9E-23 1.7E-27 172.6 17.9 200 2-230 250-463 (471)
85 PRK02731 histidinol-phosphate 99.9 9.1E-23 2E-27 177.3 16.5 188 2-227 175-365 (367)
86 PRK05166 histidinol-phosphate 99.9 4.3E-23 9.2E-28 179.9 14.1 182 2-222 183-368 (371)
87 TIGR01140 L_thr_O3P_dcar L-thr 99.9 7.5E-23 1.6E-27 175.7 14.6 177 2-222 149-329 (330)
88 PLN03026 histidinol-phosphate 99.9 9.2E-23 2E-27 178.3 15.3 171 1-211 195-366 (380)
89 PRK02610 histidinol-phosphate 99.9 1.5E-22 3.2E-27 176.6 16.0 180 2-229 192-372 (374)
90 PRK08354 putative aminotransfe 99.9 5.8E-22 1.2E-26 168.9 17.3 167 1-221 140-308 (311)
91 PRK01533 histidinol-phosphate 99.9 1.5E-22 3.2E-27 176.2 11.2 182 2-230 175-357 (366)
92 PRK08153 histidinol-phosphate 99.9 1.6E-21 3.6E-26 169.8 17.4 187 2-230 179-367 (369)
93 PRK01688 histidinol-phosphate 99.9 1.6E-22 3.5E-27 175.0 10.8 179 3-222 170-350 (351)
94 PRK14807 histidinol-phosphate 99.9 1.2E-21 2.5E-26 169.6 15.9 179 1-224 168-348 (351)
95 PRK00950 histidinol-phosphate 99.9 7.7E-22 1.7E-26 171.1 14.0 180 1-226 178-360 (361)
96 PRK03317 histidinol-phosphate 99.9 2.6E-21 5.6E-26 168.4 15.4 184 1-228 180-364 (368)
97 COG0079 HisC Histidinol-phosph 99.9 2.6E-21 5.7E-26 166.9 14.6 185 2-228 166-354 (356)
98 PRK05387 histidinol-phosphate 99.9 6.1E-21 1.3E-25 165.0 15.8 186 2-227 165-352 (353)
99 PRK04870 histidinol-phosphate 99.9 3.1E-21 6.7E-26 167.2 13.4 179 2-225 174-355 (356)
100 PLN02368 alanine transaminase 99.9 2.4E-21 5.2E-26 170.5 12.5 144 1-169 233-398 (407)
101 PRK03321 putative aminotransfe 99.9 3.1E-21 6.7E-26 166.9 13.0 182 2-227 166-350 (352)
102 PRK09105 putative aminotransfe 99.9 1.1E-20 2.3E-25 164.7 16.2 180 2-226 186-368 (370)
103 PRK04635 histidinol-phosphate 99.9 9.1E-21 2E-25 164.2 13.3 181 2-223 168-350 (354)
104 PRK14808 histidinol-phosphate 99.8 2.6E-20 5.6E-25 160.3 15.3 173 2-223 159-332 (335)
105 TIGR01141 hisC histidinol-phos 99.8 1.8E-20 3.9E-25 161.6 13.7 179 2-222 163-345 (346)
106 PRK03967 histidinol-phosphate 99.8 2.3E-20 5E-25 160.7 13.7 175 1-229 160-335 (337)
107 TIGR03576 pyridox_MJ0158 pyrid 99.8 8.4E-20 1.8E-24 157.6 16.3 182 1-224 158-343 (346)
108 cd00609 AAT_like Aspartate ami 99.8 6.5E-19 1.4E-23 151.0 19.4 190 2-223 156-349 (350)
109 PLN02822 serine palmitoyltrans 99.8 4E-18 8.7E-23 153.1 17.6 200 1-230 265-479 (481)
110 KOG0258 Alanine aminotransfera 99.8 1.1E-18 2.4E-23 146.8 11.5 212 1-230 238-471 (475)
111 PLN02483 serine palmitoyltrans 99.8 6.6E-18 1.4E-22 152.0 17.5 192 1-229 260-467 (489)
112 PRK08088 4-aminobutyrate amino 99.8 5E-18 1.1E-22 150.6 13.3 196 1-229 223-424 (425)
113 PRK05093 argD bifunctional N-s 99.8 1.2E-17 2.6E-22 147.2 14.9 188 1-229 208-401 (403)
114 PRK02627 acetylornithine amino 99.8 2E-17 4.4E-22 145.1 16.1 187 1-229 206-395 (396)
115 TIGR00858 bioF 8-amino-7-oxono 99.8 1.5E-17 3.1E-22 143.7 14.9 186 1-222 166-359 (360)
116 TIGR00707 argD acetylornithine 99.7 2.7E-17 5.8E-22 143.5 14.6 182 1-225 194-378 (379)
117 PRK02936 argD acetylornithine 99.7 2.8E-17 6.1E-22 143.5 14.6 181 1-226 191-377 (377)
118 TIGR00700 GABAtrnsam 4-aminobu 99.7 2.1E-17 4.6E-22 146.3 13.9 193 1-227 221-419 (420)
119 PRK06918 4-aminobutyrate amino 99.7 8.8E-17 1.9E-21 143.6 16.7 197 1-230 243-445 (451)
120 PRK05958 8-amino-7-oxononanoat 99.7 8.2E-17 1.8E-21 140.4 15.1 190 1-226 188-385 (385)
121 PRK06939 2-amino-3-ketobutyrat 99.7 1.4E-16 3.1E-21 139.5 16.2 191 1-229 194-394 (397)
122 PRK01278 argD acetylornithine 99.7 1.5E-16 3.3E-21 139.5 16.1 184 1-228 199-388 (389)
123 KOG0633 Histidinol phosphate a 99.7 7.7E-17 1.7E-21 129.6 11.0 183 11-225 191-374 (375)
124 PRK06777 4-aminobutyrate amino 99.7 4.3E-16 9.4E-21 137.9 16.0 189 2-227 223-420 (421)
125 PRK13392 5-aminolevulinate syn 99.7 7.2E-16 1.6E-20 136.1 15.4 194 1-229 198-398 (410)
126 cd00378 SHMT Serine-glycine hy 99.7 2.1E-15 4.5E-20 132.7 16.9 195 1-229 179-386 (402)
127 PLN00144 acetylornithine trans 99.7 1.1E-15 2.5E-20 133.7 15.1 185 1-229 191-381 (382)
128 PRK04073 rocD ornithine--oxo-a 99.7 9.5E-16 2.1E-20 134.8 13.8 181 2-226 211-395 (396)
129 PRK04260 acetylornithine amino 99.7 1.4E-15 3.1E-20 132.7 14.3 181 2-225 190-374 (375)
130 TIGR01822 2am3keto_CoA 2-amino 99.7 3.9E-15 8.5E-20 130.5 16.7 191 1-229 190-390 (393)
131 PRK03244 argD acetylornithine 99.7 2E-15 4.4E-20 132.7 14.7 185 2-230 208-396 (398)
132 TIGR01825 gly_Cac_T_rel pyrido 99.7 3.5E-15 7.6E-20 130.4 15.9 191 1-229 183-382 (385)
133 PRK12381 bifunctional succinyl 99.6 3E-15 6.6E-20 132.1 14.3 192 1-231 207-402 (406)
134 PF04864 Alliinase_C: Allinase 99.6 8.2E-16 1.8E-20 128.5 9.5 193 7-225 158-362 (363)
135 PRK09064 5-aminolevulinate syn 99.6 7.7E-15 1.7E-19 129.4 16.2 193 1-229 198-398 (407)
136 TIGR00713 hemL glutamate-1-sem 99.6 5.3E-15 1.2E-19 131.1 13.8 201 2-228 220-422 (423)
137 TIGR01821 5aminolev_synth 5-am 99.6 2.8E-14 6E-19 125.7 17.0 193 1-229 197-397 (402)
138 PTZ00125 ornithine aminotransf 99.6 2.1E-14 4.7E-19 126.2 15.8 190 2-232 203-399 (400)
139 PRK09792 4-aminobutyrate trans 99.6 2.3E-14 5E-19 126.9 15.4 192 1-227 222-420 (421)
140 cd00610 OAT_like Acetyl ornith 99.6 7E-15 1.5E-19 129.6 11.8 192 1-226 215-413 (413)
141 cd06454 KBL_like KBL_like; thi 99.6 4.5E-14 9.8E-19 121.6 16.5 187 1-225 152-348 (349)
142 TIGR02539 SepCysS Sep-tRNA:Cys 99.6 5.3E-14 1.2E-18 122.7 16.7 191 1-229 166-369 (370)
143 PF12897 Aminotran_MocR: Alani 99.6 3.3E-14 7.1E-19 120.6 13.8 187 8-228 204-415 (425)
144 PRK07505 hypothetical protein; 99.6 5.8E-14 1.3E-18 123.7 15.3 192 1-228 199-399 (402)
145 PRK08117 4-aminobutyrate amino 99.6 4.1E-14 8.9E-19 125.9 14.2 195 2-231 232-432 (433)
146 TIGR03301 PhnW-AepZ 2-aminoeth 99.6 1.7E-13 3.7E-18 118.2 17.6 198 1-225 145-354 (355)
147 PRK10534 L-threonine aldolase; 99.6 4.1E-14 9E-19 121.4 13.7 176 2-227 151-332 (333)
148 PRK13238 tnaA tryptophanase/L- 99.6 3.2E-14 7E-19 127.1 13.2 192 1-229 201-434 (460)
149 COG0156 BioF 7-keto-8-aminopel 99.6 6.3E-14 1.4E-18 121.5 14.2 189 1-225 191-387 (388)
150 PRK07179 hypothetical protein; 99.6 1.1E-13 2.3E-18 122.2 15.8 192 1-229 201-399 (407)
151 PRK13393 5-aminolevulinate syn 99.6 2.3E-13 5E-18 120.0 17.0 190 1-229 197-397 (406)
152 PRK10874 cysteine sulfinate de 99.6 3.8E-13 8.2E-18 118.4 18.3 201 1-229 180-399 (401)
153 PRK04612 argD acetylornithine 99.5 2.2E-13 4.7E-18 120.2 15.5 189 2-231 212-406 (408)
154 PLN02624 ornithine-delta-amino 99.5 1.7E-13 3.7E-18 123.1 15.0 193 1-230 248-446 (474)
155 TIGR03246 arg_catab_astC succi 99.5 1.6E-13 3.5E-18 120.7 14.1 188 1-228 203-395 (397)
156 PRK06058 4-aminobutyrate amino 99.5 2.5E-13 5.3E-18 121.2 14.8 194 1-228 243-442 (443)
157 PRK08360 4-aminobutyrate amino 99.5 5.7E-13 1.2E-17 118.7 17.1 197 1-231 228-429 (443)
158 TIGR03392 FeS_syn_CsdA cystein 99.5 9.2E-13 2E-17 115.9 18.0 201 1-229 177-396 (398)
159 PRK07495 4-aminobutyrate amino 99.5 4.2E-13 9E-18 119.0 15.4 197 1-231 222-424 (425)
160 cd06451 AGAT_like Alanine-glyo 99.5 9.2E-13 2E-17 114.0 17.0 201 1-226 144-355 (356)
161 TIGR01885 Orn_aminotrans ornit 99.5 3.1E-13 6.8E-18 119.0 14.2 188 1-226 210-400 (401)
162 PLN02955 8-amino-7-oxononanoat 99.5 2.6E-13 5.6E-18 120.4 12.9 186 1-229 269-462 (476)
163 TIGR01979 sufS cysteine desulf 99.5 1.5E-12 3.3E-17 114.6 17.7 200 1-229 179-402 (403)
164 PRK00854 rocD ornithine--oxo-a 99.5 6.2E-13 1.3E-17 117.1 15.2 186 1-227 211-400 (401)
165 PRK09264 diaminobutyrate--2-ox 99.5 1E-12 2.2E-17 116.7 16.4 190 1-230 222-418 (425)
166 PRK00062 glutamate-1-semialdeh 99.5 3.1E-13 6.7E-18 120.0 12.8 203 2-229 222-425 (426)
167 COG1448 TyrB Aspartate/tyrosin 99.5 4.9E-13 1.1E-17 113.2 12.7 186 1-225 195-395 (396)
168 TIGR02326 transamin_PhnW 2-ami 99.5 5.2E-12 1.1E-16 109.7 18.2 198 1-226 149-360 (363)
169 TIGR02407 ectoine_ectB diamino 99.5 1.9E-12 4.2E-17 114.5 15.5 188 1-228 218-412 (412)
170 PLN02721 threonine aldolase 99.5 4.3E-12 9.3E-17 109.5 16.4 186 2-228 162-352 (353)
171 PRK00011 glyA serine hydroxyme 99.4 9.5E-12 2.1E-16 110.1 18.3 191 1-228 183-389 (416)
172 PLN02855 Bifunctional selenocy 99.4 1.9E-11 4.2E-16 108.4 18.0 203 1-230 193-420 (424)
173 PRK09295 bifunctional cysteine 99.4 2.3E-11 5E-16 107.3 18.2 198 1-227 184-403 (406)
174 PRK13479 2-aminoethylphosphona 99.4 2.9E-11 6.4E-16 105.2 18.2 200 1-229 151-364 (368)
175 PRK02948 cysteine desulfurase; 99.4 3E-11 6.5E-16 105.6 16.2 196 1-229 158-375 (381)
176 TIGR03402 FeS_nifS cysteine de 99.4 9.6E-11 2.1E-15 102.4 19.0 192 1-230 156-374 (379)
177 PRK08247 cystathionine gamma-s 99.3 4.1E-11 8.9E-16 104.4 15.2 193 1-228 156-364 (366)
178 TIGR00709 dat 2,4-diaminobutyr 99.3 6E-11 1.3E-15 105.9 16.3 202 2-231 231-438 (442)
179 PLN03227 serine palmitoyltrans 99.3 6.1E-11 1.3E-15 104.3 16.1 199 1-229 158-383 (392)
180 PRK05964 adenosylmethionine--8 99.3 3E-11 6.4E-16 107.3 14.1 193 1-228 224-422 (423)
181 TIGR03403 nifS_epsilon cystein 99.3 1.7E-10 3.7E-15 101.0 18.1 193 1-230 160-377 (382)
182 cd06453 SufS_like Cysteine des 99.3 6.8E-11 1.5E-15 103.0 15.2 194 1-222 159-373 (373)
183 cd06502 TA_like Low-specificit 99.3 6.6E-11 1.4E-15 101.5 13.8 182 2-224 150-337 (338)
184 cd06452 SepCysS Sep-tRNA:Cys-t 99.3 1.6E-10 3.6E-15 100.3 16.2 194 1-226 159-360 (361)
185 PRK13520 L-tyrosine decarboxyl 99.3 1.9E-10 4.1E-15 100.0 16.5 194 1-227 171-370 (371)
186 TIGR01976 am_tr_V_VC1184 cyste 99.3 1.6E-10 3.5E-15 101.5 16.2 187 1-221 176-396 (397)
187 cd00613 GDC-P Glycine cleavage 99.3 1.7E-10 3.6E-15 101.4 15.6 194 1-222 179-398 (398)
188 PRK05937 8-amino-7-oxononanoat 99.3 3.4E-10 7.5E-15 98.7 17.2 188 1-231 163-353 (370)
189 PRK08593 4-aminobutyrate amino 99.3 1.9E-10 4.2E-15 102.6 15.9 195 1-231 231-432 (445)
190 cd00617 Tnase_like Tryptophana 99.3 6.5E-11 1.4E-15 104.9 12.1 193 2-230 177-410 (431)
191 PLN02242 methionine gamma-lyas 99.3 2.4E-10 5.1E-15 101.2 15.4 113 1-139 183-298 (418)
192 PRK06460 hypothetical protein; 99.2 6.9E-10 1.5E-14 97.1 17.4 113 1-141 150-264 (376)
193 COG0160 GabT 4-aminobutyrate a 99.2 2.7E-10 5.8E-15 100.3 14.7 190 2-229 247-446 (447)
194 PRK05769 4-aminobutyrate amino 99.2 3.9E-10 8.5E-15 100.6 15.8 189 1-228 245-439 (441)
195 PRK13580 serine hydroxymethylt 99.2 5.6E-10 1.2E-14 99.5 16.2 194 2-229 239-446 (493)
196 PRK00451 glycine dehydrogenase 99.2 1.3E-10 2.8E-15 103.9 12.3 197 1-226 223-446 (447)
197 cd06450 DOPA_deC_like DOPA dec 99.2 1E-10 2.2E-15 100.7 11.0 173 1-224 168-344 (345)
198 PRK09331 Sep-tRNA:Cys-tRNA syn 99.2 9.5E-10 2.1E-14 96.5 17.2 192 1-229 178-382 (387)
199 PRK07049 methionine gamma-lyas 99.2 6.1E-10 1.3E-14 98.9 16.0 112 2-142 195-315 (427)
200 PRK06541 hypothetical protein; 99.2 1.2E-09 2.6E-14 97.9 16.5 202 2-230 246-457 (460)
201 TIGR03812 tyr_de_CO2_Arch tyro 99.2 1.6E-09 3.5E-14 94.3 17.0 187 1-224 173-372 (373)
202 PRK07678 aminotransferase; Val 99.2 9E-10 1.9E-14 98.5 15.1 207 2-229 238-450 (451)
203 COG4992 ArgD Ornithine/acetylo 99.2 1.4E-09 3E-14 93.7 14.9 188 2-231 209-401 (404)
204 PLN02409 serine--glyoxylate am 99.2 3.7E-09 8.1E-14 93.2 18.2 203 1-230 157-374 (401)
205 TIGR01437 selA_rel uncharacter 99.1 6.3E-10 1.4E-14 96.9 12.4 187 1-225 169-362 (363)
206 PRK13034 serine hydroxymethylt 99.1 6.5E-09 1.4E-13 92.2 18.4 187 2-228 187-392 (416)
207 PLN02760 4-aminobutyrate:pyruv 99.1 3.1E-09 6.8E-14 96.1 15.8 199 1-230 284-493 (504)
208 PRK03715 argD acetylornithine 99.1 3.4E-09 7.4E-14 93.3 15.6 183 1-229 203-394 (395)
209 KOG1357 Serine palmitoyltransf 99.1 3E-10 6.4E-15 98.0 8.3 192 1-226 296-500 (519)
210 PRK11522 putrescine--2-oxoglut 99.1 5.2E-09 1.1E-13 93.8 16.7 191 2-231 256-454 (459)
211 KOG1359 Glycine C-acetyltransf 99.1 2.3E-09 4.9E-14 88.2 13.0 194 1-230 213-414 (417)
212 PRK07582 cystathionine gamma-l 99.1 5.2E-09 1.1E-13 91.3 16.2 114 1-141 152-267 (366)
213 PRK08776 cystathionine gamma-s 99.1 1.2E-08 2.6E-13 90.1 17.7 114 1-141 165-280 (405)
214 PRK08133 O-succinylhomoserine 99.1 7.6E-09 1.7E-13 91.0 16.3 114 1-141 166-280 (390)
215 PRK13360 omega amino acid--pyr 99.1 1.2E-08 2.5E-13 91.2 16.9 196 2-229 240-441 (442)
216 COG0520 csdA Selenocysteine ly 99.0 3.1E-08 6.8E-13 87.3 18.9 199 1-227 182-404 (405)
217 COG0001 HemL Glutamate-1-semia 99.0 4.7E-09 1E-13 91.3 13.0 204 1-231 224-431 (432)
218 PRK07986 adenosylmethionine--8 99.0 4.8E-09 1E-13 93.2 13.4 184 2-229 230-424 (428)
219 PRK06767 methionine gamma-lyas 99.0 1.1E-08 2.5E-13 89.7 15.4 117 1-143 166-283 (386)
220 PRK07504 O-succinylhomoserine 99.0 1.9E-08 4.2E-13 88.6 16.8 114 1-141 170-285 (398)
221 TIGR01325 O_suc_HS_sulf O-succ 99.0 2.2E-08 4.7E-13 87.8 16.8 112 1-140 159-272 (380)
222 TIGR03372 putres_am_tran putre 99.0 4.8E-09 1.1E-13 93.4 12.8 190 2-226 249-442 (442)
223 PRK06105 aminotransferase; Pro 99.0 1.5E-08 3.3E-13 90.9 16.1 192 2-230 243-451 (460)
224 PRK09221 beta alanine--pyruvat 99.0 1.9E-08 4.2E-13 89.9 16.6 196 2-229 243-444 (445)
225 KOG1360 5-aminolevulinate synt 99.0 1.6E-08 3.4E-13 86.5 14.9 190 1-229 323-525 (570)
226 TIGR00508 bioA adenosylmethion 99.0 9.1E-09 2E-13 91.5 14.2 180 2-228 233-426 (427)
227 PRK07480 putative aminotransfe 99.0 1.3E-08 2.8E-13 91.2 15.3 200 2-231 244-451 (456)
228 PRK06173 adenosylmethionine--8 99.0 1.1E-08 2.5E-13 90.9 14.6 189 2-229 232-426 (429)
229 TIGR03235 DNA_S_dndA cysteine 99.0 2.5E-09 5.4E-14 92.6 10.2 184 1-217 158-347 (353)
230 PRK05639 4-aminobutyrate amino 99.0 1.8E-08 3.9E-13 90.3 16.0 190 1-230 246-445 (457)
231 cd00614 CGS_like CGS_like: Cys 99.0 2.3E-08 4.9E-13 87.3 16.2 114 1-141 145-260 (369)
232 PRK08297 L-lysine aminotransfe 99.0 1E-08 2.2E-13 91.6 13.5 191 1-229 249-442 (443)
233 PTZ00094 serine hydroxymethylt 99.0 5.5E-08 1.2E-12 87.2 18.0 194 2-229 201-409 (452)
234 TIGR01977 am_tr_V_EF2568 cyste 99.0 4.2E-08 9.1E-13 85.5 16.8 198 1-224 157-375 (376)
235 PRK08249 cystathionine gamma-s 99.0 4.8E-08 1E-12 86.1 17.0 113 1-140 169-282 (398)
236 PRK07046 aminotransferase; Val 99.0 1.7E-08 3.8E-13 90.3 14.4 207 2-230 243-452 (453)
237 KOG1412 Aspartate aminotransfe 99.0 3.2E-08 6.9E-13 82.1 14.2 188 2-231 202-408 (410)
238 PRK12403 putative aminotransfe 98.9 5.5E-08 1.2E-12 87.3 17.0 199 2-231 247-455 (460)
239 PRK06082 4-aminobutyrate amino 98.9 3.7E-08 8E-13 88.4 15.8 192 2-231 253-454 (459)
240 TIGR02006 IscS cysteine desulf 98.9 8.9E-08 1.9E-12 84.5 18.0 193 1-230 162-379 (402)
241 PRK12389 glutamate-1-semialdeh 98.9 2.2E-08 4.7E-13 89.2 13.7 198 2-228 225-427 (428)
242 PRK06062 hypothetical protein; 98.9 3.8E-08 8.2E-13 88.1 15.2 203 2-230 239-447 (451)
243 PRK08742 adenosylmethionine--8 98.9 4.5E-08 9.8E-13 88.0 15.8 199 2-229 262-468 (472)
244 PRK06234 methionine gamma-lyas 98.9 2.8E-08 6.2E-13 87.6 14.2 58 1-66 169-229 (400)
245 PRK06943 adenosylmethionine--8 98.9 4.2E-08 9.2E-13 87.8 15.3 195 2-230 247-448 (453)
246 PRK07481 hypothetical protein; 98.9 4.5E-08 9.8E-13 87.6 15.4 196 2-229 238-446 (449)
247 PRK07483 hypothetical protein; 98.9 5.6E-08 1.2E-12 86.9 15.7 202 2-230 225-439 (443)
248 PRK05630 adenosylmethionine--8 98.9 5E-08 1.1E-12 86.7 15.3 189 2-228 226-420 (422)
249 PRK07482 hypothetical protein; 98.9 7E-08 1.5E-12 86.6 16.3 201 1-230 244-456 (461)
250 PRK06148 hypothetical protein; 98.9 2.9E-08 6.3E-13 96.7 14.8 195 2-229 809-1011(1013)
251 PRK06149 hypothetical protein; 98.9 6.9E-08 1.5E-12 93.9 17.2 190 2-228 769-970 (972)
252 PRK06917 hypothetical protein; 98.9 6.6E-08 1.4E-12 86.5 15.6 205 2-231 225-440 (447)
253 PRK06938 diaminobutyrate--2-ox 98.9 9.3E-08 2E-12 85.9 16.5 203 2-229 256-461 (464)
254 PRK05965 hypothetical protein; 98.9 8.2E-08 1.8E-12 86.2 16.1 198 2-229 240-448 (459)
255 PLN03226 serine hydroxymethylt 98.9 7.4E-08 1.6E-12 86.7 15.8 194 2-228 202-419 (475)
256 PRK07036 hypothetical protein; 98.9 1.1E-07 2.4E-12 85.4 16.8 197 2-230 245-454 (466)
257 PRK14012 cysteine desulfurase; 98.9 1.5E-07 3.3E-12 83.0 17.4 190 1-229 164-380 (404)
258 PRK07030 adenosylmethionine--8 98.9 1.1E-07 2.5E-12 85.3 16.6 196 2-229 240-447 (466)
259 TIGR01328 met_gam_lyase methio 98.9 6.7E-08 1.5E-12 85.0 14.7 112 1-140 164-279 (391)
260 PLN02482 glutamate-1-semialdeh 98.9 2.9E-08 6.3E-13 89.2 12.6 197 2-228 271-473 (474)
261 PRK00615 glutamate-1-semialdeh 98.9 4.3E-08 9.2E-13 87.3 13.1 196 2-229 226-429 (433)
262 PRK06931 diaminobutyrate--2-ox 98.9 3.9E-08 8.4E-13 88.2 12.9 196 1-231 249-457 (459)
263 TIGR02080 O_succ_thio_ly O-suc 98.9 1.9E-07 4.2E-12 81.9 16.6 113 1-140 156-270 (382)
264 COG1104 NifS Cysteine sulfinat 98.8 2.7E-07 5.8E-12 79.7 16.9 193 1-231 161-380 (386)
265 PRK07811 cystathionine gamma-s 98.8 1.5E-07 3.3E-12 82.7 15.8 114 1-141 166-281 (388)
266 PF00266 Aminotran_5: Aminotra 98.8 1.8E-07 3.9E-12 81.5 16.2 188 1-217 159-370 (371)
267 PRK05968 hypothetical protein; 98.8 1.4E-07 2.9E-12 83.0 15.3 114 1-142 167-283 (389)
268 PRK08045 cystathionine gamma-s 98.8 2.7E-07 5.9E-12 81.0 16.8 113 1-140 157-271 (386)
269 COG0161 BioA Adenosylmethionin 98.8 5.2E-08 1.1E-12 85.7 12.1 202 1-231 239-446 (449)
270 PRK07503 methionine gamma-lyas 98.8 3.3E-07 7.1E-12 81.0 17.1 112 1-140 170-285 (403)
271 TIGR03251 LAT_fam L-lysine 6-t 98.8 8.2E-08 1.8E-12 85.5 12.6 185 2-224 243-430 (431)
272 PRK06209 glutamate-1-semialdeh 98.8 1.1E-07 2.5E-12 84.6 13.4 59 2-66 208-266 (431)
273 PRK07810 O-succinylhomoserine 98.8 4.4E-07 9.5E-12 80.2 16.7 114 1-141 175-290 (403)
274 TIGR01326 OAH_OAS_sulfhy OAH/O 98.8 2.4E-07 5.2E-12 82.2 14.9 58 1-66 162-219 (418)
275 PRK06916 adenosylmethionine--8 98.8 2.8E-07 6E-12 82.8 15.3 196 2-229 249-456 (460)
276 PRK07269 cystathionine gamma-s 98.8 1.8E-07 3.8E-12 81.6 13.1 127 1-154 156-285 (364)
277 TIGR03531 selenium_SpcS O-phos 98.7 3.2E-07 7E-12 81.5 14.7 189 1-225 225-443 (444)
278 cd00616 AHBA_syn 3-amino-5-hyd 98.7 6.4E-07 1.4E-11 77.2 15.9 194 1-222 123-351 (352)
279 PRK04013 argD acetylornithine/ 98.7 3.8E-07 8.2E-12 79.5 14.2 173 2-230 187-362 (364)
280 PLN02974 adenosylmethionine-8- 98.7 3.1E-07 6.7E-12 87.2 13.3 197 2-226 610-816 (817)
281 TIGR00699 GABAtrns_euk 4-amino 98.6 3.8E-07 8.3E-12 81.7 12.0 181 2-226 276-464 (464)
282 PRK11706 TDP-4-oxo-6-deoxy-D-g 98.6 1.3E-06 2.9E-11 76.4 14.7 200 1-226 136-374 (375)
283 TIGR01814 kynureninase kynuren 98.6 3E-06 6.5E-11 74.9 17.0 193 1-226 191-405 (406)
284 PRK08574 cystathionine gamma-s 98.6 2.3E-06 5E-11 75.2 16.1 113 1-140 157-271 (385)
285 TIGR02379 ECA_wecE TDP-4-keto- 98.6 2.2E-06 4.7E-11 75.1 15.8 61 1-72 136-201 (376)
286 KOG1402 Ornithine aminotransfe 98.6 9E-07 2E-11 74.2 12.4 186 2-227 232-426 (427)
287 PRK06084 O-acetylhomoserine am 98.6 3.2E-06 7E-11 75.2 16.3 58 1-66 163-220 (425)
288 TIGR01329 cysta_beta_ly_E cyst 98.6 2E-06 4.4E-11 75.4 14.9 112 1-139 151-264 (378)
289 COG0075 Serine-pyruvate aminot 98.6 4.6E-06 9.9E-11 72.4 16.6 205 1-229 151-364 (383)
290 KOG1404 Alanine-glyoxylate ami 98.6 2.8E-06 6E-11 72.7 14.6 190 2-222 237-432 (442)
291 PRK08861 cystathionine gamma-s 98.6 4.7E-06 1E-10 73.3 16.7 113 1-140 158-272 (388)
292 PLN02651 cysteine desulfurase 98.6 2.3E-06 4.9E-11 74.5 14.5 177 1-215 158-363 (364)
293 PRK05939 hypothetical protein; 98.6 3.5E-06 7.7E-11 74.3 15.8 58 1-66 151-208 (397)
294 PRK08064 cystathionine beta-ly 98.6 4.4E-06 9.5E-11 73.6 16.0 113 1-140 158-272 (390)
295 PRK09028 cystathionine beta-ly 98.6 5E-06 1.1E-10 73.2 16.2 113 1-141 166-280 (394)
296 PRK07671 cystathionine beta-ly 98.5 7.6E-06 1.6E-10 71.7 17.0 114 1-140 154-268 (377)
297 TIGR01364 serC_1 phosphoserine 98.5 5E-06 1.1E-10 72.1 15.2 190 5-228 149-348 (349)
298 TIGR01324 cysta_beta_ly_B cyst 98.5 8.5E-06 1.8E-10 71.4 16.7 112 1-140 155-268 (377)
299 PRK08248 O-acetylhomoserine am 98.5 7.3E-06 1.6E-10 73.1 16.4 58 1-66 169-226 (431)
300 PRK07050 cystathionine beta-ly 98.5 4.3E-06 9.4E-11 73.7 14.7 113 1-140 170-284 (394)
301 PRK06176 cystathionine gamma-s 98.5 7E-06 1.5E-10 72.0 15.5 58 1-66 154-212 (380)
302 PF00464 SHMT: Serine hydroxym 98.5 4.5E-06 9.8E-11 73.1 13.9 178 2-210 188-381 (399)
303 KOG1401 Acetylornithine aminot 98.5 3.5E-06 7.5E-11 72.5 12.7 193 2-230 231-432 (433)
304 PRK11658 UDP-4-amino-4-deoxy-L 98.5 1.2E-05 2.6E-10 70.5 16.4 63 1-72 138-201 (379)
305 PLN02590 probable tyrosine dec 98.5 1.1E-05 2.4E-10 73.5 16.4 218 1-232 307-536 (539)
306 TIGR01366 serC_3 phosphoserine 98.4 1.3E-05 2.7E-10 69.9 15.7 198 4-228 148-360 (361)
307 PRK06702 O-acetylhomoserine am 98.4 6.9E-06 1.5E-10 73.1 14.0 58 1-66 167-234 (432)
308 PRK05967 cystathionine beta-ly 98.4 2.1E-05 4.5E-10 69.3 16.4 113 1-141 169-283 (395)
309 PLN02509 cystathionine beta-ly 98.4 3.5E-05 7.5E-10 69.3 18.1 115 1-141 237-352 (464)
310 PRK03080 phosphoserine aminotr 98.4 2.2E-05 4.9E-10 68.8 16.4 203 2-232 157-377 (378)
311 PLN02271 serine hydroxymethylt 98.4 3.2E-05 7E-10 70.1 17.4 202 2-227 317-539 (586)
312 PF01276 OKR_DC_1: Orn/Lys/Arg 98.4 4.6E-06 1E-10 73.4 11.6 65 1-67 187-256 (417)
313 COG0112 GlyA Glycine/serine hy 98.4 3.2E-05 6.9E-10 66.5 16.2 190 2-228 185-390 (413)
314 KOG1411 Aspartate aminotransfe 98.3 9.1E-07 2E-11 74.5 6.1 186 1-225 221-422 (427)
315 PLN02880 tyrosine decarboxylas 98.3 1.3E-05 2.9E-10 72.5 13.8 213 1-231 259-487 (490)
316 PRK04366 glycine dehydrogenase 98.3 5.9E-05 1.3E-09 68.3 17.5 205 1-230 228-450 (481)
317 PRK05355 3-phosphoserine/phosp 98.3 4.3E-05 9.4E-10 66.6 15.5 186 10-229 165-359 (360)
318 PRK15029 arginine decarboxylas 98.3 5.5E-05 1.2E-09 71.4 16.4 64 1-66 331-401 (755)
319 TIGR03588 PseC UDP-4-keto-6-de 98.3 7.6E-05 1.6E-09 65.4 16.4 205 1-226 138-380 (380)
320 cd00615 Orn_deC_like Ornithine 98.2 1.4E-06 3.1E-11 73.6 4.8 60 1-65 173-233 (294)
321 PF01053 Cys_Met_Meta_PP: Cys/ 98.2 6.8E-05 1.5E-09 65.9 15.2 114 2-141 161-277 (386)
322 PRK05994 O-acetylhomoserine am 98.2 0.00013 2.8E-09 65.0 16.7 57 1-65 168-224 (427)
323 PRK07812 O-acetylhomoserine am 98.2 0.0001 2.3E-09 65.8 15.7 58 1-66 175-232 (436)
324 cd00611 PSAT_like Phosphoserin 98.1 0.00012 2.5E-09 63.7 14.7 187 5-225 157-353 (355)
325 KOG1358 Serine palmitoyltransf 98.1 4.8E-05 1E-09 65.3 11.7 196 1-228 253-465 (467)
326 PF00202 Aminotran_3: Aminotra 98.0 2.5E-05 5.3E-10 67.6 8.1 60 2-66 202-261 (339)
327 PRK08114 cystathionine beta-ly 98.0 0.00035 7.5E-09 61.6 15.1 112 1-140 167-282 (395)
328 KOG1405 4-aminobutyrate aminot 98.0 0.00039 8.4E-09 59.2 14.2 185 2-228 296-483 (484)
329 PRK08134 O-acetylhomoserine am 98.0 0.00052 1.1E-08 61.3 16.0 57 1-65 169-225 (433)
330 PLN02452 phosphoserine transam 97.9 0.00052 1.1E-08 59.9 14.7 162 44-228 194-363 (365)
331 cd01494 AAT_I Aspartate aminot 97.9 1.9E-05 4.2E-10 60.1 5.1 58 2-65 113-170 (170)
332 PRK13578 ornithine decarboxyla 97.9 0.00026 5.5E-09 66.4 12.8 205 2-228 302-565 (720)
333 PRK15407 lipopolysaccharide bi 97.9 0.0013 2.9E-08 58.8 16.8 57 1-67 176-236 (438)
334 PLN02724 Molybdenum cofactor s 97.8 0.00088 1.9E-08 64.4 16.3 193 12-227 231-487 (805)
335 PRK13237 tyrosine phenol-lyase 97.8 0.0019 4.1E-08 57.6 17.1 189 2-229 202-434 (460)
336 COG0626 MetC Cystathionine bet 97.8 0.00096 2.1E-08 58.5 14.8 114 2-142 170-286 (396)
337 PLN02414 glycine dehydrogenase 97.8 0.0022 4.7E-08 62.5 18.2 206 2-230 687-909 (993)
338 COG0399 WecE Predicted pyridox 97.8 0.0018 3.9E-08 56.4 15.7 205 1-227 139-372 (374)
339 PRK04311 selenocysteine syntha 97.8 0.0013 2.9E-08 59.1 15.4 196 1-227 240-463 (464)
340 TIGR01788 Glu-decarb-GAD gluta 97.7 0.0018 3.9E-08 57.8 15.2 208 1-229 206-430 (431)
341 KOG0053 Cystathionine beta-lya 97.7 0.0017 3.8E-08 56.6 14.2 57 1-65 182-239 (409)
342 PRK05367 glycine dehydrogenase 97.7 0.0029 6.3E-08 61.7 17.2 203 2-231 661-878 (954)
343 TIGR02618 tyr_phenol_ly tyrosi 97.7 0.0035 7.5E-08 55.9 16.0 192 2-229 195-427 (450)
344 PRK15400 lysine decarboxylase 97.6 0.00085 1.8E-08 63.0 12.4 191 2-227 317-558 (714)
345 PRK05613 O-acetylhomoserine am 97.6 0.003 6.5E-08 56.5 15.4 56 1-64 175-230 (437)
346 KOG1549 Cysteine desulfurase N 97.6 0.0011 2.5E-08 58.0 12.1 57 1-66 201-257 (428)
347 PRK12566 glycine dehydrogenase 97.6 0.0029 6.3E-08 60.9 15.8 203 2-230 662-878 (954)
348 COG1103 Archaea-specific pyrid 97.6 0.0022 4.8E-08 52.9 12.1 198 2-229 177-381 (382)
349 TIGR03799 NOD_PanD_pyr putativ 97.5 0.0039 8.4E-08 57.0 15.0 210 1-221 285-518 (522)
350 KOG2467 Glycine/serine hydroxy 97.5 0.0056 1.2E-07 52.6 14.6 202 2-226 208-424 (477)
351 PRK02769 histidine decarboxyla 97.5 0.014 3E-07 51.4 17.4 186 1-229 180-373 (380)
352 COG0076 GadB Glutamate decarbo 97.5 0.0011 2.3E-08 59.7 10.5 148 1-154 227-377 (460)
353 PRK15399 lysine decarboxylase 97.5 0.0056 1.2E-07 57.6 15.5 64 160-227 487-558 (713)
354 COG2008 GLY1 Threonine aldolas 97.5 0.0037 7.9E-08 53.4 12.9 179 1-226 153-341 (342)
355 COG1982 LdcC Arginine/lysine/o 97.5 0.0046 9.9E-08 56.2 14.1 201 1-229 185-405 (557)
356 COG2873 MET17 O-acetylhomoseri 97.4 0.017 3.6E-07 49.9 15.7 58 1-66 167-224 (426)
357 PRK05367 glycine dehydrogenase 97.4 0.0093 2E-07 58.2 15.7 187 2-223 226-437 (954)
358 PF01041 DegT_DnrJ_EryC1: DegT 97.3 0.0033 7.1E-08 54.8 11.5 176 1-196 130-310 (363)
359 TIGR01365 serC_2 phosphoserine 97.3 0.017 3.6E-07 50.7 15.6 99 117-224 261-369 (374)
360 KOG2862 Alanine-glyoxylate ami 97.3 0.04 8.6E-07 46.5 16.6 197 3-230 165-384 (385)
361 TIGR00474 selA seryl-tRNA(sec) 97.3 0.0051 1.1E-07 55.3 12.2 61 1-66 235-302 (454)
362 PRK06434 cystathionine gamma-l 97.1 0.025 5.4E-07 49.8 14.8 112 1-141 168-281 (384)
363 KOG1403 Predicted alanine-glyo 97.1 0.031 6.8E-07 47.0 14.2 190 2-228 234-437 (452)
364 KOG1368 Threonine aldolase [Am 97.1 0.016 3.5E-07 48.6 12.3 185 2-228 179-369 (384)
365 PLN02263 serine decarboxylase 96.9 0.079 1.7E-06 47.7 15.7 187 1-229 248-444 (470)
366 COG1921 SelA Selenocysteine sy 96.8 0.0051 1.1E-07 53.6 7.5 116 1-137 177-298 (395)
367 PF05889 SLA_LP_auto_ag: Solub 96.8 0.029 6.3E-07 48.9 11.7 192 1-227 175-389 (389)
368 PRK12462 phosphoserine aminotr 96.7 0.059 1.3E-06 47.0 13.2 185 9-227 166-361 (364)
369 PLN02414 glycine dehydrogenase 96.6 0.14 2.9E-06 50.4 16.3 189 2-223 254-464 (993)
370 PLN03032 serine decarboxylase; 96.5 0.11 2.3E-06 45.7 13.5 181 1-223 181-371 (374)
371 TIGR00461 gcvP glycine dehydro 96.4 0.6 1.3E-05 45.6 19.3 208 2-230 649-869 (939)
372 PF00282 Pyridoxal_deC: Pyrido 96.3 0.058 1.2E-06 47.3 11.1 148 1-154 214-370 (373)
373 COG3844 Kynureninase [Amino ac 96.0 0.6 1.3E-05 40.0 14.9 204 2-232 187-406 (407)
374 TIGR00461 gcvP glycine dehydro 96.0 0.29 6.3E-06 47.7 14.7 90 112-223 335-426 (939)
375 TIGR02617 tnaA_trp_ase tryptop 95.9 0.32 6.9E-06 43.5 13.6 188 2-229 208-442 (467)
376 KOG1383 Glutamate decarboxylas 95.6 1.2 2.7E-05 39.7 16.0 205 1-231 238-449 (491)
377 PF06838 Met_gamma_lyase: Meth 94.9 0.066 1.4E-06 46.3 5.7 58 2-71 179-242 (403)
378 KOG0628 Aromatic-L-amino-acid/ 94.8 2.6 5.6E-05 37.7 15.4 53 176-229 417-472 (511)
379 PF03841 SelA: L-seryl-tRNA se 94.3 0.12 2.7E-06 44.8 6.1 119 1-137 160-295 (367)
380 COG1932 SerC Phosphoserine ami 93.6 3.2 7E-05 36.0 13.2 162 42-229 192-364 (365)
381 KOG0629 Glutamate decarboxylas 92.0 1.4 3.1E-05 39.0 9.0 208 2-225 274-506 (510)
382 PF02347 GDC-P: Glycine cleava 91.7 9.4 0.0002 34.2 18.0 127 2-141 217-367 (429)
383 KOG3843 Predicted serine hydro 88.8 0.35 7.5E-06 40.2 2.5 53 1-55 177-230 (432)
384 PRK12566 glycine dehydrogenase 81.7 53 0.0012 32.6 13.8 87 113-222 350-438 (954)
385 COG4100 Cystathionine beta-lya 79.6 1.7 3.6E-05 36.9 2.7 55 2-66 190-250 (416)
386 COG0403 GcvP Glycine cleavage 76.9 55 0.0012 29.3 13.6 189 2-223 231-445 (450)
387 COG3033 TnaA Tryptophanase [Am 76.7 50 0.0011 29.1 10.6 110 103-229 314-445 (471)
388 TIGR03811 tyr_de_CO2_Ent tyros 57.8 1E+02 0.0022 29.2 9.6 64 1-67 298-399 (608)
389 PF01212 Beta_elim_lyase: Beta 57.6 5.4 0.00012 33.8 1.2 60 2-66 149-208 (290)
390 TIGR00789 flhB_rel flhB C-term 52.5 9.7 0.00021 25.7 1.6 25 1-25 30-54 (82)
391 COG1091 RfbD dTDP-4-dehydrorha 51.9 9.8 0.00021 32.1 1.8 67 2-71 83-159 (281)
392 PF04237 YjbR: YjbR; InterPro 51.2 74 0.0016 21.4 6.1 43 177-221 42-87 (92)
393 COG2257 Uncharacterized homolo 51.0 7 0.00015 26.8 0.7 24 1-24 35-58 (92)
394 KOG2790 Phosphoserine aminotra 44.6 2E+02 0.0044 24.6 8.7 107 104-228 259-368 (370)
395 PF13872 AAA_34: P-loop contai 37.0 18 0.00039 30.8 1.2 22 1-22 162-184 (303)
396 PF08544 GHMP_kinases_C: GHMP 34.9 1.3E+02 0.0028 19.5 5.8 46 177-225 35-82 (85)
397 PF09186 DUF1949: Domain of un 33.2 77 0.0017 18.8 3.4 45 177-224 7-51 (56)
398 COG1088 RfbB dTDP-D-glucose 4, 32.8 44 0.00096 28.6 2.8 27 2-28 107-138 (340)
399 PF06153 DUF970: Protein of un 32.1 55 0.0012 23.4 2.8 53 177-229 12-67 (109)
400 COG4050 Uncharacterized protei 31.2 1.7E+02 0.0037 21.3 5.1 45 177-232 106-150 (152)
401 COG0352 ThiE Thiamine monophos 29.5 38 0.00082 27.3 1.9 20 2-21 56-75 (211)
402 PF00224 PK: Pyruvate kinase, 24.8 2.4E+02 0.0053 24.5 6.2 43 176-230 15-58 (348)
403 COG1560 HtrB Lauroyl/myristoyl 23.6 4.7E+02 0.01 22.4 7.6 53 177-229 222-281 (308)
404 PF13549 ATP-grasp_5: ATP-gras 23.3 2.6E+02 0.0055 22.7 5.7 53 177-230 11-92 (222)
405 cd04937 ACT_AKi-DapG-BS_2 ACT 22.2 2E+02 0.0044 17.6 4.6 45 178-226 18-62 (64)
406 cd04922 ACT_AKi-HSDH-ThrA_2 AC 21.7 2E+02 0.0043 17.3 4.6 48 177-226 17-64 (66)
407 PF01974 tRNA_int_endo: tRNA i 20.9 72 0.0016 21.3 1.7 21 180-200 6-26 (85)
408 cd04915 ACT_AK-Ectoine_2 ACT d 20.3 2.3E+02 0.0051 17.7 5.1 47 178-226 18-64 (66)
409 cd04924 ACT_AK-Arch_2 ACT doma 20.2 2.1E+02 0.0046 17.1 4.6 47 178-226 18-64 (66)
No 1
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.8e-37 Score=258.65 Aligned_cols=215 Identities=57% Similarity=1.011 Sum_probs=200.0
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
.+|+++|++++++||.||+|.+++|++.++.|+..+....++|+++|+||.|..||||+||++..++..++++...+
T Consensus 222 ~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssiVPVitlggisKrW~VPGWRlGWi~~hD~~gvf~~~~~~--- 298 (447)
T KOG0259|consen 222 KKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSIVPVITLGGISKRWIVPGWRLGWIALHDPRGVFRDTKVV--- 298 (447)
T ss_pred HHHHHHHHHhCCeEEehhhcceeecCCCCccchhhccccCceEeecccccccccCCceeeeEEEecccccccchHHH---
Confidence 37999999999999999999999999999999999999999999999999999999999999999987788765555
Q ss_pred hhhhHHhhhhhhhhccCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCC
Q 047983 81 SISLNMRMDDYLLLSESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSE 159 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~ 159 (233)
..+..+.....++.+.. +|+..+|+...++++......++.+.+...+.|+++|++.++.+|+|.+|+|
T Consensus 299 -----q~~~~~~~~~~~p~TiiQ~AlP~IL~kTp~efF~k~~~~lk~na~l~y~~Lk~IP~l~cp~kPeg~mylm----- 368 (447)
T KOG0259|consen 299 -----QGIKNFLDIIPGPATIIQGALPDILEKTPEEFFDKKLSFLKSNADLCYSRLKDIPCLTCPVKPEGCMYLM----- 368 (447)
T ss_pred -----HHHHHHHhccCCccHhHHHHhHHHHHhChHHHHHHHHHHHHhhHHHHHHHHhcCCCcccCcCCCcceEEE-----
Confidence 67777777777777777 9999999888999999999999999999999999999999889999999999
Q ss_pred CcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeecCHHHHHHHHHHHHHHHHHHhhc
Q 047983 160 DKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAVEPSAFEIGLGRMKAFYYRHAKK 232 (233)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~~~~~l~~~~~~l~~~l~~~~~~ 232 (233)
+.++.+-++.+.||.+|+.++.+|+.+.+.||..|+..+|+|++++.+.+.++++++||+.+..++.++
T Consensus 369 ----v~l~~s~~~~~~dD~dFc~kL~~Eesv~~LPG~af~~~nw~Ri~i~~~~~~leea~~Rik~Fc~RH~~~ 437 (447)
T KOG0259|consen 369 ----VKLNLSLFPDIEDDVDFCQKLAREESVICLPGQAFGLKNWLRIVITVEEEMLEEAFSRIKEFCDRHSKE 437 (447)
T ss_pred ----eccchhhhccccccHHHHHHHhhhcceEEeccccccCCCeEEEEEccChHHHHHHHHHHHHHHHhhhhc
Confidence 888888777888999999999999999999999999999999999999999999999999999999854
No 2
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=1.8e-34 Score=255.66 Aligned_cols=216 Identities=61% Similarity=1.089 Sum_probs=170.9
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|+++|+++|++||+||+|.++.|++..+.++..+...+++|+++||||.|++||||+||++++++..+++..+++
T Consensus 213 ~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pG~RlG~iv~~~~~~~~~~~~~~--- 289 (430)
T PLN00145 213 AKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFGEVAPVLTLGSISKRWVVPGWRLGWIATCDPNGILKETKVV--- 289 (430)
T ss_pred HHHHHHHHHcCCEEEEeccchhhccCCCCccchhhhcccCcEEEEeccccccCCCCeeEEEEEEecchhhhhhhHHH---
Confidence 36889999999999999999999987755566666666679999999999999999999999986433444321122
Q ss_pred hhhhHHhhhhhhhhccCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCC
Q 047983 81 SISLNMRMDDYLLLSESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSE 159 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~ 159 (233)
..+..+...+.++++.. .++..++....++++++.++.++++++.+.+.|++++++.++..|+||+|+|
T Consensus 290 -----~~~~~~~~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~P~ga~y~~----- 359 (430)
T PLN00145 290 -----DSIRNYLNISTDPATFVQGAIPQIIANTKEEFFTKTLGLLKETADICYEKIKEIKCITCPHKPEGSMFVM----- 359 (430)
T ss_pred -----HHHHHHhcccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcCCCeeeEEE-----
Confidence 33444433333333433 6666666554578999999999999999999999887776545799999999
Q ss_pred CcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeecCHHHHHHHHHHHHHHHHHHhhcC
Q 047983 160 DKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAVEPSAFEIGLGRMKAFYYRHAKKQ 233 (233)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~~~~~l~~~~~~l~~~l~~~~~~~ 233 (233)
++++...+++..++.+++.++++++||.+.||+.|+..+|+||+++.+.+.++++++||.+++.++++++
T Consensus 360 ----v~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~lRis~~~~~~~l~~al~rl~~~~~~~~~~~ 429 (430)
T PLN00145 360 ----VKLDLSCLSGIKDDMDFCCKLAKEESVVVLPGSALGMKNWLRITFAIDPPSLEDGLERLKSFCLRHAKLA 429 (430)
T ss_pred ----eccChhhcCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhcccc
Confidence 7776432223335788999999999999999999998899999999999999999999999999998653
No 3
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=7.4e-35 Score=254.60 Aligned_cols=202 Identities=25% Similarity=0.466 Sum_probs=167.9
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCC-ccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGS-IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|+++|++||++||+||+|.++.|++..+.++..+.+ .+++|++.||||.|+++|||+||+++++. .+++ .+
T Consensus 186 ~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRvG~~v~~~~-~l~~---~~-- 259 (393)
T COG0436 186 KAIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGWRIGWVVGPPE-ELIA---AL-- 259 (393)
T ss_pred HHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCCcceEEEEecccccccccccceeEeecChH-HHHH---HH--
Confidence 37999999999999999999999999865566665554 58999999999999999999999999952 4553 23
Q ss_pred hhhhhHHhhhhhhhhccCcchHHHHHHHHhhhcH-HHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecC
Q 047983 80 HSISLNMRMDDYLLLSESVYTTVGAVPQILEKTE-EEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGS 158 (233)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~ 158 (233)
.+++++...+.+...|.++.+++ +... ..+.+.+++.+++||+.+.+.|++++++.++.+|+|++|+|
T Consensus 260 ------~~~~~~~~~~~~~~~Q~aa~~aL-~~~~~~~~~~~~~~~~~~rrd~l~~~l~~~~g~~~~~~p~Ga~Y~~---- 328 (393)
T COG0436 260 ------RKLKSYLTSCAPTPAQYAAIAAL-NGPQSDEVVEEMREEYRERRDLLVEALNEIGGLSVVKPPEGAFYLF---- 328 (393)
T ss_pred ------HHHHHhcccCCCHHHHHHHHHHh-cCccchHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccCCCeeEEEE----
Confidence 45666666777777775666665 3332 46888899999999999999999988888755599999999
Q ss_pred CCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCC---CcEEEEeecCHHHHHHHHHHHHHHHHHH
Q 047983 159 EDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLK---DWLRITFAVEPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~---~~~Rl~~~~~~~~l~~~~~~l~~~l~~~ 229 (233)
++++.. .|+.+++.++|+++||.|+||+.|+.. +|+|+|++.+.+.++++++++.++++.+
T Consensus 329 -----~~i~~~-----~d~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRis~~~~~~~l~~a~~rl~~~~~~~ 392 (393)
T COG0436 329 -----PKIPEL-----LDSEEFAKKLLEEAGVAVVPGSGFGEPPGEGYVRLSLATSEETLEEALRRLARFLAEY 392 (393)
T ss_pred -----eecCCC-----CCHHHHHHHHHHhCCEEEecccccCCCCCCCeEEEEEecCHHHHHHHHHHHHHHHHhc
Confidence 555532 369999999999999999999999964 8999999998899999999999998764
No 4
>PLN02187 rooty/superroot1
Probab=100.00 E-value=1.4e-33 Score=251.78 Aligned_cols=215 Identities=48% Similarity=0.929 Sum_probs=165.4
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|+++|++||++||+||+|.++.|++..+.++..+....++|+++||||.|++||+|+||+++++++.+++.++.+
T Consensus 227 ~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~~~~~~vi~l~SfSK~f~~pGlRiG~~v~~~p~~~~~~~~~~--- 303 (462)
T PLN02187 227 KKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVLTLAGISKGWVVPGWKIGWIALNDPEGVFETTKVL--- 303 (462)
T ss_pred HHHHHHHHHCCCEEEEeccccccccCCCCceeHHHhccCCcEEEEecchhhcCCccceeEEEEecCchhHHHHHHHH---
Confidence 36899999999999999999999997755556665655567999999999999999999999996532222100111
Q ss_pred hhhhHHhhhhhhhhccCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCC
Q 047983 81 SISLNMRMDDYLLLSESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSE 159 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~ 159 (233)
..++....++.+++... .+++++++...++|+++.++.++++++.+.+.|++++....+..|+||+|+|
T Consensus 304 -----~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~~~~l~~~~~~l~~~r~~l~~~L~~~~~~~~~~~P~gg~fl~----- 373 (462)
T PLN02187 304 -----QSIKQNLDVTPDPATIIQAALPAILEKADKNFFAKKNKILKHNVDLVCDRLKDIPCVVCPKKPESCTYLL----- 373 (462)
T ss_pred -----HHHHHhccccCCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCCCCCEeEEEE-----
Confidence 33333333333333433 6666666544568999999999999999999999886554345799999999
Q ss_pred CcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeecCHHHHHHHHHHHHHHHHHHhhc
Q 047983 160 DKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAVEPSAFEIGLGRMKAFYYRHAKK 232 (233)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~~~~~l~~~~~~l~~~l~~~~~~ 232 (233)
++++.....++.++.+++.++++++||.+.||+.|+..+|+||+++.+++.++++++||.++++++.++
T Consensus 374 ----~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~iRis~~~~~e~l~~al~rL~~~l~~~~~~ 442 (462)
T PLN02187 374 ----TKLELSLMDNIKDDIDFCVKLAREENLVFLPGDALGLKNWMRITIGVEAHMLEDALERLKGFCTRHAKK 442 (462)
T ss_pred ----eecChhhCCCCCCHHHHHHHHHhhCCEEEECccccCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhhc
Confidence 666533222333467888899999999999999998889999999999999999999999999988765
No 5
>PLN02656 tyrosine transaminase
Probab=100.00 E-value=2.3e-32 Score=240.91 Aligned_cols=215 Identities=64% Similarity=1.150 Sum_probs=162.8
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|+++|++||++||+||+|.+|.|++..+.++..++..+++|+++||||.|++||+|+||++++++..++..-.++
T Consensus 192 ~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRiG~~i~~~~~~~~~~~~~~--- 268 (409)
T PLN02656 192 KKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWIVPGWRLGWFVTTDPSGSFRDPKIV--- 268 (409)
T ss_pred HHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHhcccCcEEEEcccchhccCcceeEEEEEEeCcccccccHHHH---
Confidence 36899999999999999999999998755556655666678999999999999999999999996421111000222
Q ss_pred hhhhHHhhhhhhhh--ccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecC
Q 047983 81 SISLNMRMDDYLLL--SESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGS 158 (233)
Q Consensus 81 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~ 158 (233)
.++...... +.+...| .++..+++...+.++++.++.++++++.+.+.|+++++...+..|+||+|+|
T Consensus 269 -----~~~~~~~~~~~~~s~~~q-~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~~p~gg~~~w---- 338 (409)
T PLN02656 269 -----ERIKKYFDILGGPATFIQ-AAVPTILEQTDESFFKKTINILKQSSDICCDRIKEIPCITCPHKPEGSMAVM---- 338 (409)
T ss_pred -----HHHHHHHhhhcCCCHHHH-HHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCcCCCeEEEEE----
Confidence 333322222 2223333 6666666544567899999999999999999998876544335799999999
Q ss_pred CCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeecCHHHHHHHHHHHHHHHHHHhhcC
Q 047983 159 EDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAVEPSAFEIGLGRMKAFYYRHAKKQ 233 (233)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~~~~~l~~~~~~l~~~l~~~~~~~ 233 (233)
++++........++.+++.++++++||.++||+.|+..+|+||+++.+++.++++++||++++.++..+|
T Consensus 339 -----~~l~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~fg~~~~iRi~~~~~~e~l~eal~rl~~~~~~~~~~~ 408 (409)
T PLN02656 339 -----VKLNLSLLEDISDDIDFCFKLAREESVIILPGTAVGLKNWLRITFAADPSSLEEALGRIKSFYLRHSKTQ 408 (409)
T ss_pred -----EecchhhcCCCCCHHHHHHHHHHhCCEEEecchhcCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhcccc
Confidence 6665321112223567888899999999999999988899999999999999999999999998887654
No 6
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=4.1e-32 Score=239.33 Aligned_cols=214 Identities=63% Similarity=1.074 Sum_probs=161.2
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|+++|++||++||+||+|.++.+++..+.++..+...+++|+++||||.|++||+|+||++++++..+++.+..+
T Consensus 193 ~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRvG~~v~~~p~~~~~~~~~~--- 269 (409)
T PLN00143 193 NKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFASIVPVITLGSISKRWMIPGWGLGWLVTCDPSGLLQICEIA--- 269 (409)
T ss_pred HHHHHHHHHcCCeEEEEccccccccCCCCCcchhhhcccCcEEEEccchhhcCCCccceEEEEeeCchhhhhhHHHH---
Confidence 36899999999999999999999987654455555666678999999999999999999999995432333211112
Q ss_pred hhhhHHhhhhhhhh--ccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecC
Q 047983 81 SISLNMRMDDYLLL--SESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGS 158 (233)
Q Consensus 81 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~ 158 (233)
..+...... ..+...| .+++.++++....++++.++.++++++.+.+.|++++....+..|+||+|+|
T Consensus 270 -----~~~~~~~~~~~~~~~~~q-~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~p~gg~f~w---- 339 (409)
T PLN00143 270 -----DSIKKALNPAPFPPTFIQ-AAIPEILEKTTEDFFSKTINILRAALAFCYDKLKEIPCIMCPQKAEGAFFAL---- 339 (409)
T ss_pred -----HHHHHHHhccCCCCchHH-HHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCeeEEEE----
Confidence 223222211 1223333 5666666544567899999999999999999998875544335799999999
Q ss_pred CCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeecCHHHHHHHHHHHHHHHHHHhhc
Q 047983 159 EDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAVEPSAFEIGLGRMKAFYYRHAKK 232 (233)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~~~~~l~~~~~~l~~~l~~~~~~ 232 (233)
++++....++..++.+++.++++++||.++||+.|+.++|+||+++.+.++++++++||.++++++.++
T Consensus 340 -----~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRi~~~~~~~~l~~al~rl~~~l~~~~~~ 408 (409)
T PLN00143 340 -----VKLNLLLLEDIEDDMEFCLKLAKEESLIILPGVTVGLKNWLRITFAVEQSSLEDGLGRLKSFCGRHAKK 408 (409)
T ss_pred -----EecchhhcCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEEcCCHHHHHHHHHHHHHHHHHhccC
Confidence 655421111222477888889899999999999998889999999999999999999999999988754
No 7
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=100.00 E-value=3.7e-31 Score=232.92 Aligned_cols=211 Identities=49% Similarity=0.900 Sum_probs=160.7
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|+++|+++|++||+||+|.++.+++..+.++..+....++|+++||||.|++||+|+||+++++++.++.. .++
T Consensus 192 ~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~-~~~--- 267 (403)
T TIGR01265 192 QKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMASFASIVPVLSLGGISKRWVVPGWRLGWIIIHDPHGIFRD-TVL--- 267 (403)
T ss_pred HHHHHHHHHCCCEEEEEccccccccCCCCccchhhhccCCcEEEEeecccccCCCcceEEEEEEeCchhhhHH-HHH---
Confidence 3689999999999999999999998875555666666666899999999999999999999999643122211 122
Q ss_pred hhhhHHhhhhhhhhccCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCC
Q 047983 81 SISLNMRMDDYLLLSESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSE 159 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~ 159 (233)
..+..+.....+++... .+++.++....+.++++.++.++++++.+.+.|+.++++. +..|+||+|+|
T Consensus 268 -----~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~p~~g~f~~----- 336 (403)
T TIGR01265 268 -----QGLKNLLQRILGPATIVQGALPDILENTPQEFFDGKISVLKSNAELCYEELKDIPGLV-CPKPEGAMYLM----- 336 (403)
T ss_pred -----HHHHHHhhhhcCCChHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcCCCce-ecCCCceeEEE-----
Confidence 33333322222233333 6666666555568999999999999999999998876665 36799999999
Q ss_pred CcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeecCHHHHHHHHHHHHHHHHHHh
Q 047983 160 DKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAVEPSAFEIGLGRMKAFYYRHA 230 (233)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~~~~~l~~~~~~l~~~l~~~~ 230 (233)
++++.....+..++.+++.++++++||.|.||+.|+..+|+|+|++.+++++++++++|.+++++++
T Consensus 337 ----~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~iRis~~~~~~~l~~~l~~l~~~~~~~~ 403 (403)
T TIGR01265 337 ----VKLELELFPEIKDDVDFCEKLVREESVICLPGSAFGLPNWVRITITVPESMLEEACSRIKEFCERHA 403 (403)
T ss_pred ----EeccccccCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEecCCHHHHHHHHHHHHHHHHhcC
Confidence 6665321111224677778888899999999999988899999999988999999999999997763
No 8
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.98 E-value=8e-31 Score=230.57 Aligned_cols=207 Identities=32% Similarity=0.674 Sum_probs=157.5
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHS 81 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~ 81 (233)
+|+++|+++|++||+||+|.+|.+++..+.++..+....++|+++||||.|++||+|+||++++++...+. .++
T Consensus 192 ~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~iv~~~~~~~~~--~~~---- 265 (401)
T TIGR01264 192 EILAVAERQCLPIIADEIYGDMVFSGATFEPLASLSSTVPILSCGGLAKRWLVPGWRLGWIIIHDRRGILR--DIR---- 265 (401)
T ss_pred HHHHHHHHCCCEEEEEhhhhhhccCCcccccHHHcCCCCcEEEEccCcccCCCccceEEEEEecCcchhHH--HHH----
Confidence 68999999999999999999999877555566666555579999999999999999999999986322221 122
Q ss_pred hhhHHhhhhhh--hhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCC
Q 047983 82 ISLNMRMDDYL--LLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSE 159 (233)
Q Consensus 82 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~ 159 (233)
..+.... ..+.+...| .++..++.+..++++++.++.++++++.+.+.|++++++. +..|+||+|+|
T Consensus 266 ----~~~~~~~~~~~~~~~~~q-~a~~~~l~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~-~~~p~~g~f~~----- 334 (401)
T TIGR01264 266 ----DGLVKLSQRILGPCTIVQ-GALPSILLRTPQEYFDGTLSVLESNAMLCYGALAAVPGLR-PVMPSGAMYMM----- 334 (401)
T ss_pred ----HHHHHHhhccCCCCcHHH-HHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhCCCCc-ccCCCeeeEEE-----
Confidence 3332222 223333344 5556666544568999999999999999999999886655 36799999999
Q ss_pred CcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeecCHHHHHHHHHHHHHHHHHH
Q 047983 160 DKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAVEPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~~~~~l~~~~~~l~~~l~~~ 229 (233)
++++....++..++.+++.++++++||.|.||+.|+..+|+|++++.+++++++++++|.++++++
T Consensus 335 ----~~~~~~~~~~~~~~~~~~~~l~~~~gI~v~pg~~f~~~~~iRis~~~~~~~l~~~l~rl~~~~~~~ 400 (401)
T TIGR01264 335 ----VGIEMEHFPEFKNDVEFTERLVAEQSVFCLPGSCFEYPGFFRVVLTVPVVMMEEACSRIQEFCERH 400 (401)
T ss_pred ----EEecccccCCCCCHHHHHHHHHHhCCEEEeCchhcCCCCeEEEEEcCCHHHHHHHHHHHHHHHhcc
Confidence 655421111222467778888888999999999998789999999998899999999999998754
No 9
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.97 E-value=1.7e-30 Score=229.26 Aligned_cols=210 Identities=32% Similarity=0.522 Sum_probs=158.2
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|+++|++||++||+||+|.+|.+++....++..++...++|+++||||.|++||+|+||+++++++...+ .++
T Consensus 200 ~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRlG~~i~~~p~~~~~--~~~--- 274 (412)
T PTZ00433 200 EDIIRLCEELRLPLISDEIYAGMVFNGATFTSVADFDTTVPRVILGGTAKNLVVPGWRLGWLLLVDPHGNGG--DFL--- 274 (412)
T ss_pred HHHHHHHHHcCCeEEEeccccccccCCCCccchhhccCCCceEEEccchhhcCCCCeeEEEEEEeCCcccHH--HHH---
Confidence 368999999999999999999999876544556556554578999999999999999999999842211111 122
Q ss_pred hhhhHHhhhhhhh--hccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecC
Q 047983 81 SISLNMRMDDYLL--LSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGS 158 (233)
Q Consensus 81 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~ 158 (233)
..+..... .+.+...| .++..++.+..+.++++.++.++++++.+.+.|++..++. +..|+||+|+|
T Consensus 275 -----~~~~~~~~~~~~~~~~~q-~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~~~p~gg~f~~---- 343 (412)
T PTZ00433 275 -----DGMKRLGMLVCGPCSVVQ-AALGEALLNTPQEHLEQIVAKLEEGAMVLYNHIGECIGLS-PTMPRGSMFLM---- 343 (412)
T ss_pred -----HHHHHHhhccCCCChHHH-HHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCc-ccCCCeeEEEE----
Confidence 33333222 23333333 5555555444568999999999999999999998864555 37899999999
Q ss_pred CCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeecCHHHHHHHHHHHHHHHHHHhh
Q 047983 159 EDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAVEPSAFEIGLGRMKAFYYRHAK 231 (233)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~~~~~l~~~~~~l~~~l~~~~~ 231 (233)
++++...+.+..++.+++.++++++||.|.||+.|+..+|+|+|++.+++++++++++|.++++++++
T Consensus 344 -----~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRis~~~~~e~l~~al~~l~~~~~~~~~ 411 (412)
T PTZ00433 344 -----SRLDLEKFRDIKSDVEFYEKLLEEENVQVLPGEIFHMPGFTRLTISRPVEVLREAVERIKAFCERHKK 411 (412)
T ss_pred -----EEechhhcCCCCCHHHHHHHHHHhcCEEEeCccccCCCCeEEEEecCCHHHHHHHHHHHHHHHHHhcc
Confidence 77654222122246778888887889999999999888999999999889999999999999988764
No 10
>PRK06855 aminotransferase; Validated
Probab=99.97 E-value=3.5e-30 Score=228.58 Aligned_cols=208 Identities=18% Similarity=0.348 Sum_probs=156.6
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCC--Cccccccchhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDP--NGILQDLGVAF 78 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~--~~~~~~~~~~~ 78 (233)
++|+++|++||++||+||+|.++.|++..+.++..+.++.++|+++||||.|++||+|+||+++++. ...+. .++
T Consensus 194 ~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~~~pGlRiG~ii~p~~~~~~~~~--~~~- 270 (433)
T PRK06855 194 REIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGDVPGIALKGISKELPWPGSRCGWIEVYNADKDEVFK--KYI- 270 (433)
T ss_pred HHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcCcCCeEEEecCccccCCCcceEEEEEEeCCchhhHHH--HHH-
Confidence 3689999999999999999999999775556666665545789999999999999999999998531 01111 122
Q ss_pred hhhhhhHHhhhhhh--hhccCcchHHHHHHHHhhhc-HHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEE
Q 047983 79 FHSISLNMRMDDYL--LLSESVYTTVGAVPQILEKT-EEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMY 155 (233)
Q Consensus 79 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~ 155 (233)
..+.... ..+.+...| .+++.++++. .+++++++++.+++|++.+.+.|++++++.. .+|+||||+|
T Consensus 271 -------~~~~~~~~~~~~~~~~~Q-~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~-~~p~gg~~~w- 340 (433)
T PRK06855 271 -------NSILNAKMIEVCSTTLPQ-MAIPRIMSHPEYKNYLKERNKRYEKRSNIAYEKLKDVPGLKV-NRTNGAFYMT- 340 (433)
T ss_pred -------HHHHHhhccccCCChHHH-HHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCeec-cCCCeeEEEe-
Confidence 2222221 123333333 6666666554 4789999999999999999999988766653 7899999999
Q ss_pred ecCCCccccccccccc-----CC-----------------CCChHHHHHHHHhccCEEEECCcccCC-CCcEEEEeec-C
Q 047983 156 CGSEDKCLLKLNYSLL-----EG-----------------INSDTEFALKLAKEESIIVLPGITVGL-KDWLRITFAV-E 211 (233)
Q Consensus 156 ~~~~~~~~~~~~~~~~-----~~-----------------~~~~~~~~~~ll~~~gi~v~pg~~f~~-~~~~Rl~~~~-~ 211 (233)
++++.... .. ..++.+++..+++++||.+.||+.|+. .+++|+|++. +
T Consensus 341 --------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~~~~~~~Rls~~~~~ 412 (433)
T PRK06855 341 --------VVFEDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFCTELNGFRVTLLERD 412 (433)
T ss_pred --------eccccccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCCCCCCceEEEECCCc
Confidence 55543210 00 114678888999999999999999975 4579999996 8
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 047983 212 PSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 212 ~~~l~~~~~~l~~~l~~~ 229 (233)
.+++++++++|.++++++
T Consensus 413 ~~~i~~~~~~l~~~~~~~ 430 (433)
T PRK06855 413 EEKFEWIYQTLAEKIEEY 430 (433)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999999999875
No 11
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.97 E-value=6.2e-30 Score=225.06 Aligned_cols=203 Identities=17% Similarity=0.363 Sum_probs=157.2
Q ss_pred hHHHHHHHc-CcEEEEccccCccccCCCccccccccCC--ccCEEEEccCccccCCCCceEEEEEecCCCccccccchhh
Q 047983 2 CIEETTKKL-GIMVIADEVYGHLVFGNTHFVPMGVFGS--IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAF 78 (233)
Q Consensus 2 ~i~~l~~~~-~~~lI~De~y~~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~ 78 (233)
+|+++|++| ++++|+||+|.++.|++..+.++..+.. .+++|+++||||.|++||+|+||+++++ ++++. +
T Consensus 190 ~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~~~~~--~~~~~---~- 263 (402)
T PRK06107 190 ALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGYAAGPA--DLIAA---I- 263 (402)
T ss_pred HHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEeccchhhcCcccceeeeecCH--HHHHH---H-
Confidence 678999998 9999999999999887755555555533 4689999999999999999999999987 44421 1
Q ss_pred hhhhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecC
Q 047983 79 FHSISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGS 158 (233)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~ 158 (233)
..+......+.+...| .+++.++.. .+.++++.++.++++++.+.+.|++++++.. .+|+||+|+|
T Consensus 264 -------~~~~~~~~~~~s~~~q-~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~-~~p~gg~~~~---- 329 (402)
T PRK06107 264 -------NKLQSQSSSCPSSISQ-AAAAAALNG-DQSFVTESVAVYKQRRDYALALLNAIPGLSC-LVPDGAFYLY---- 329 (402)
T ss_pred -------HHHHHhcccCCChHHH-HHHHHHhcC-ChHHHHHHHHHHHHHHHHHHHHHhcCCCCcc-cCCCcceEEe----
Confidence 2333333334444444 666666643 3678999999999999999999988766664 7899999999
Q ss_pred CCcccccccc------cccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeecCHHHHHHHHHHHHHHHHHH
Q 047983 159 EDKCLLKLNY------SLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAVEPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 159 ~~~~~~~~~~------~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~~~~~l~~~~~~l~~~l~~~ 229 (233)
++++. +......++.+++.++++++||.++||+.|+..+|+|++++.+.+++++++++|.+++++.
T Consensus 330 -----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~Fg~~~~iRis~~~~~e~l~~~l~~l~~~l~~~ 401 (402)
T PRK06107 330 -----VNCAGLIGKTTPEGKVLETDQDVVLYLLDSAGVAVVQGTAYGLSPYFRLSIATSLETLEEACARIERAVAAL 401 (402)
T ss_pred -----eecccccccccccccCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeCCCHHHHHHHHHHHHHHHHhc
Confidence 55421 1000112467888899999999999999998889999999999999999999999988653
No 12
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.97 E-value=1.3e-29 Score=223.03 Aligned_cols=203 Identities=19% Similarity=0.298 Sum_probs=154.3
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCC-ccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGS-IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|+++|++||++||+||+|.++.+++....++..++. .+++|+++||||.|++||+|+||+++++ .+++. +
T Consensus 198 ~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~iv~~~--~li~~---~-- 270 (403)
T PRK08636 198 ERLVALAKKERFYIISDIAYADITFDGYKTPSILEVEGAKDVAVESYTLSKSYNMAGWRVGFVVGNK--KLVGA---L-- 270 (403)
T ss_pred HHHHHHHHHcCcEEEEeccchhhccCCCCCCChhcCCCccccEEEEEecccccCCccceeeeeeCCH--HHHHH---H--
Confidence 36899999999999999999999987655556666644 3578899999999999999999999987 44421 1
Q ss_pred hhhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCC
Q 047983 80 HSISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSE 159 (233)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~ 159 (233)
.++......+.+.+.+ .+...++ ...++++++.++.++++++.+.+.|++. ++. +..|+||+|+|
T Consensus 271 ------~~~~~~~~~~~~~~~q-~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~-~~~p~~g~~~~----- 335 (403)
T PRK08636 271 ------KKIKSWLDYGMFTPIQ-VAATIAL-DGDQSCVEEIRETYRKRRDVLIESFANA-GWE-LQKPRASMFVW----- 335 (403)
T ss_pred ------HHHHHHhcccCChHHH-HHHHHHH-hCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCc-ccCCCcceEEE-----
Confidence 2222222233333344 3333333 2346789999999999999999999887 454 36899999999
Q ss_pred CcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC--CCcEEEEeecCHHHHHHHHHHHHHHHHHHhh
Q 047983 160 DKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL--KDWLRITFAVEPSAFEIGLGRMKAFYYRHAK 231 (233)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~~Rl~~~~~~~~l~~~~~~l~~~l~~~~~ 231 (233)
++++... ..+ ++.+++.++++++||.+.||+.|+. .+|+||+++.+.+++++++++|.++++++++
T Consensus 336 ----~~l~~~~-~~~-~~~~l~~~ll~~~gV~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~~~rl~~~l~~~~~ 403 (403)
T PRK08636 336 ----AKIPEPA-RHL-GSLEFSKQLLTEAKVAVSPGIGFGEYGDEYVRIALIENENRIRQAARNIKKFLKELEG 403 (403)
T ss_pred ----EECCCcc-CCC-CHHHHHHHHHHhCCEEEecchhhCcCCCCeEEEEecCCHHHHHHHHHHHHHHHHhhcC
Confidence 6654211 011 3567777888889999999999975 5899999998999999999999999988653
No 13
>PLN00175 aminotransferase family protein; Provisional
Probab=99.97 E-value=7.3e-30 Score=225.27 Aligned_cols=196 Identities=21% Similarity=0.399 Sum_probs=153.0
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCC-ccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGS-IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
+|+++|++|+++||+||+|.++.+++. +.++..+.. .+++|+++||||.|++||+|+||+++++ ++++. +
T Consensus 211 ~l~~~a~~~~~~ii~De~Y~~l~~~~~-~~s~~~~~~~~~~vi~i~SfSK~~~~~G~RiG~~v~~~--~l~~~---l--- 281 (413)
T PLN00175 211 LIASLCKENDVLAFTDEVYDKLAFEGD-HISMASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPP--HLTWG---V--- 281 (413)
T ss_pred HHHHHHHHcCcEEEEecccCccccCCc-ccChhhCCCCcCcEEEEecchhhccCcchheeeeEeCH--HHHHH---H---
Confidence 689999999999999999999998753 335555543 5789999999999999999999999987 44431 1
Q ss_pred hhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCCC
Q 047983 81 SISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSED 160 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~ 160 (233)
........++.+.+.| .+++.+++. .+.++++.++.+++|++.+.+.|++. ++.. ..|+||+|+|
T Consensus 282 -----~~~~~~~~~~~s~~~Q-~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~p~g~~f~~------ 346 (413)
T PLN00175 282 -----RQAHSFLTFATATPMQ-WAAVAALRA-PESYYEELKRDYSAKKDILVEGLKEV-GFKV-YPSSGTYFVM------ 346 (413)
T ss_pred -----HHHHhhccCCCCHHHH-HHHHHHHhC-CHHHHHHHHHHHHHHHHHHHHHHHHC-CCee-cCCCeeEEEE------
Confidence 3333333445555555 555555543 36789999999999999999999887 4553 6899999999
Q ss_pred cccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC-----CCcEEEEeecCHHHHHHHHHHHHHHHH
Q 047983 161 KCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL-----KDWLRITFAVEPSAFEIGLGRMKAFYY 227 (233)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~-----~~~~Rl~~~~~~~~l~~~~~~l~~~l~ 227 (233)
++++.. +..++.+++.++++++||.+.||+.|+. .+|+|++++.+++++++++++|.++++
T Consensus 347 ---~~~~~~---~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~~~~~e~l~~~~~rL~~~~~ 412 (413)
T PLN00175 347 ---VDHTPF---GFENDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAFCKDEETLRAAVERMKTKLK 412 (413)
T ss_pred ---Eecccc---CCCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 554211 2224678888888889999999999952 479999999999999999999998875
No 14
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.97 E-value=1.3e-29 Score=223.31 Aligned_cols=200 Identities=19% Similarity=0.312 Sum_probs=152.2
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccC-CccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFG-SIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
+|+++|++||++||+||+|.++.|++..+.++..+. ..+++|+++||||.|++||+|+||+++++ .+++.+
T Consensus 202 ~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlRiG~ii~~~--~l~~~~------ 273 (405)
T PRK06207 202 QIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSGYRLGVAFGSP--AIIDRM------ 273 (405)
T ss_pred HHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchhhccCcccceEEEEcCH--HHHHHH------
Confidence 689999999999999999999998775444454443 35799999999999999999999999887 444321
Q ss_pred hhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCCC
Q 047983 81 SISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSED 160 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~ 160 (233)
.........+.+...| .++..+++. ...++++.++.++++++.+.+.|++++++.. ..|+||+|+|
T Consensus 274 -----~~~~~~~~~~~~~~~q-~a~~~~l~~-~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-~~p~gg~fl~------ 339 (405)
T PRK06207 274 -----EKLQAIVSLRAAGYSQ-AVLRTWFSE-PDGWMKDRIARHQAIRDDLLRVLRGVEGVFV-RAPQAGSYLF------ 339 (405)
T ss_pred -----HHHHhHhccCCCHHHH-HHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHhcCCCcee-cCCCeeEEEE------
Confidence 2222322333333344 555556543 2356777788889999999999988766653 6799999999
Q ss_pred cccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC--CCcEEEEeecCHHHHHHHHHHHHHHHHHHh
Q 047983 161 KCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL--KDWLRITFAVEPSAFEIGLGRMKAFYYRHA 230 (233)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~~Rl~~~~~~~~l~~~~~~l~~~l~~~~ 230 (233)
++++.. +. ++.+++..+++++||.|.||+.|+. .+|+|||++.+.++++++++||.+++++++
T Consensus 340 ---~~l~~~---~~-~~~~~~~~l~~~~gV~v~pG~~F~~~~~~~~Ris~~~~~~~l~~al~rl~~~l~~~~ 404 (405)
T PRK06207 340 ---PRLPRL---AV-SLHDFVKILRLQAGVIVTPGTEFSPHTADSIRLNFSQDHAAAVAAAERIAQLIERYR 404 (405)
T ss_pred ---EeCccc---CC-CHHHHHHHHHHhcCEEEeCchHhCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHHhh
Confidence 665421 11 3567777777788999999999975 689999999989999999999999998875
No 15
>PRK07324 transaminase; Validated
Probab=99.97 E-value=9.5e-30 Score=221.82 Aligned_cols=197 Identities=22% Similarity=0.417 Sum_probs=155.0
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|+++|++||++||+||+|.++.+++. +.++. +..+++|+++||||.|++||+|+||+++++ .+++. +
T Consensus 176 ~~i~~~a~~~~~~ii~De~y~~l~~~~~-~~s~~--~~~~~~I~~~s~SK~~~~~G~RiG~i~~~~--~li~~---~--- 244 (373)
T PRK07324 176 EEIVEIARSVDAYVLSDEVYRPLDEDGS-TPSIA--DLYEKGISTNSMSKTYSLPGIRVGWIAANE--EVIDI---L--- 244 (373)
T ss_pred HHHHHHHHHCCCEEEEEccccccccCCC-CCChh--hccCCEEEEecchhhcCCccceeEEEecCH--HHHHH---H---
Confidence 3688999999999999999999988653 33333 234678999999999999999999999976 45532 1
Q ss_pred hhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCCC
Q 047983 81 SISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSED 160 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~ 160 (233)
.+++.+.+++.+..++..+... + ...+.++++.++.+++|++.+.+.|++.+++. +..|+||+|+|
T Consensus 245 -----~~~~~~~~~~~~~~~q~~a~~~-l-~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~-~~~p~gg~~~~------ 310 (373)
T PRK07324 245 -----RKYRDYTMICAGVFDDMLASLA-L-EHRDAILERNRKIVRTNLAILDEWVAKEPRVS-YVKPKAVSTSF------ 310 (373)
T ss_pred -----HHHhCcEEecCChHHHHHHHHH-H-cCHHHHHHHHHHHHHHHHHHHHHHHhcCCCce-EECCCceEEEE------
Confidence 3334433444444444333333 3 34567899999999999999999998876665 37899999999
Q ss_pred cccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeecCHHHHHHHHHHHHHHHHHHh
Q 047983 161 KCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAVEPSAFEIGLGRMKAFYYRHA 230 (233)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~~~~~l~~~~~~l~~~l~~~~ 230 (233)
++++.+. ++.+++.++++++||.|.||+.|+.++|+|++++.+++.++++++||.++++++.
T Consensus 311 ---i~~~~~~-----~~~~~~~~ll~~~gv~v~pg~~F~~~~~iRis~~~~~~~l~~~l~rl~~~l~~~~ 372 (373)
T PRK07324 311 ---VKLDVDM-----PSEDFCLKLLKETGVLLVPGNRFDLEGHVRIGYCCDTETLKKGLKKLSEFLREFD 372 (373)
T ss_pred ---EEeCCCC-----CHHHHHHHHHHhcCEEEECccccCCCCeEEEEecCCHHHHHHHHHHHHHHHHhcc
Confidence 6676432 4788999999999999999999998899999999999999999999999998763
No 16
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.97 E-value=1e-29 Score=226.54 Aligned_cols=200 Identities=25% Similarity=0.439 Sum_probs=163.5
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHS 81 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~ 81 (233)
+|+++|++||++||+||.|++|.+++.+..++.+++..++||+++||||. ..||+|+||+++|+ .+++. .
T Consensus 251 ~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld~~~rViy~gSFSK~-l~PglRlG~vv~p~--~~~~~---~---- 320 (459)
T COG1167 251 ALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALDAPGRVIYLGSFSKT-LAPGLRLGYVVAPP--ELIEK---L---- 320 (459)
T ss_pred HHHHHHHHcCCeEEeeCcchhhhcCCCCCCChHhhCCCCCEEEEeeehhh-cccccceeeeeCCH--HHHHH---H----
Confidence 78999999999999999999999998777788889989999999999999 89999999999998 45532 1
Q ss_pred hhhHHhhhhhhhhccCcchHHHHHHHHhhhc-HHHHHHHHHHHHHHHHHHHHHHhhc-CCCcccccCCCccEEEEEecCC
Q 047983 82 ISLNMRMDDYLLLSESVYTTVGAVPQILEKT-EEEFFSKITDILREAADICCDRLKE-IPCITCPKKPEGSMFVMYCGSE 159 (233)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~g~~~~~~~~~ 159 (233)
...+.......+...| .+++..+.++ .++|++++++.|++|++.+.++|++ .++...+..|+||+|+|
T Consensus 321 ----~~~k~~~~~~~s~~~Q-~~la~~l~~G~~~~hl~~lR~~y~~rr~~l~~~L~~~~~~~~~~~~p~gG~flw----- 390 (459)
T COG1167 321 ----LRLKQAADLGPSSLSQ-AALAAFLLSGHYDRHLRRLRREYARRRDALLEALAEYLPELATWTRPEGGLFLW----- 390 (459)
T ss_pred ----HHHHHHhcCCCChHHH-HHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeecCCceEEEE-----
Confidence 3444444444444444 6666666654 6899999999999999999999999 55455578999999999
Q ss_pred CcccccccccccCCCCChHHHHHHHHhccCEEEEC-CcccCC----CCcEEEEeec-CHHHHHHHHHHHHHHHHHHhh
Q 047983 160 DKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLP-GITVGL----KDWLRITFAV-EPSAFEIGLGRMKAFYYRHAK 231 (233)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~p-g~~f~~----~~~~Rl~~~~-~~~~l~~~~~~l~~~l~~~~~ 231 (233)
++++.+. +...+...+.++||.+.| |..|.. .+++|++++. +.+++++++.+|.+.+.+...
T Consensus 391 ----l~l~~~~------~~~~l~~~a~~~gv~i~~~g~~f~~~~~~~~~~Rl~~s~~~~e~i~~gi~~l~~~~~~~~~ 458 (459)
T COG1167 391 ----LELPEGI------DARELLAAALEKGVVVTPLGSAFSADGDPRNGLRLSFSSPSEEEIEEGIKRLAALLREAAA 458 (459)
T ss_pred ----EEcCCCC------CHHHHHHHHHHCCCEEEcCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 7776532 455555556677999999 988875 3589999998 899999999999999988754
No 17
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.97 E-value=2.4e-29 Score=227.71 Aligned_cols=207 Identities=19% Similarity=0.415 Sum_probs=152.8
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|+++|++||++||+||+|.+|.|++..+.++..+.++..+++++||||.|++||||+||++++.+..+++ .++
T Consensus 304 ~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~~~~~~~~vi~~~S~SK~~~~~G~RiG~~i~~~~~~~~~--~~~--- 378 (517)
T PRK13355 304 QQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIASLAPDLFCVTFSGLSKSHMIAGYRIGWMILSGNKRIAK--DYI--- 378 (517)
T ss_pred HHHHHHHHHcCcEEEEehhhhhhcCCCCCcccHHHhCCCCeEEEEecchhhccCcccceEEEEeeCchhhHH--HHH---
Confidence 368999999999999999999999987555566656554568889999999999999999999764323322 122
Q ss_pred hhhhHHhhhhh--hhhccCcchHHHHHHHHhhhc--HHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEe
Q 047983 81 SISLNMRMDDY--LLLSESVYTTVGAVPQILEKT--EEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYC 156 (233)
Q Consensus 81 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~ 156 (233)
..+... ...+.+...| .+....+... .++++...++. .++++.+.+.|++++++.+ .+|+|+||+|
T Consensus 379 -----~~l~~~~~~~~~~~~~~q-~a~~~aL~~~~~~~~~~~~~~~~-~~~r~~l~~~L~~~~g~~~-~~p~g~fy~~-- 448 (517)
T PRK13355 379 -----EGLNMLANMRLCSNVPAQ-SIVQTALGGHQSVKDYLVPGGRV-YEQRELVYNALNAIPGISA-VKPKAAFYIF-- 448 (517)
T ss_pred -----HHHHHHhcCcCCcChHHH-HHHHHHhcCCccHHHHHHHHHHH-HHHHHHHHHHHhcCCCccc-CCCCeeeEEE--
Confidence 222211 1233333444 3334444322 34566665444 4568999999998877775 7999999999
Q ss_pred cCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC--CCcEEEEeecCHHHHHHHHHHHHHHHHHHh
Q 047983 157 GSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL--KDWLRITFAVEPSAFEIGLGRMKAFYYRHA 230 (233)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~~Rl~~~~~~~~l~~~~~~l~~~l~~~~ 230 (233)
++++.... ++.++.+++.++|+++||.|+||+.|+. ++|+|++++.++++++++++||.+++++++
T Consensus 449 -------~~l~~~~~-~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~Ris~~~~~~~l~~a~~rl~~~~~~~~ 516 (517)
T PRK13355 449 -------PKIDVKKF-NIHDDEQFALDLLHDKKVLIVQGTGFNWDKPDHFRVVYLPRLEDLEDAMDRLADFFSYYR 516 (517)
T ss_pred -------eecCcccC-CCCCHHHHHHHHHHhCCEEEeCcchhCCCCcCEEEEEeCCCHHHHHHHHHHHHHHHHHhh
Confidence 66653221 2235778999999999999999999974 689999998899999999999999998764
No 18
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.97 E-value=1.7e-29 Score=221.31 Aligned_cols=197 Identities=18% Similarity=0.291 Sum_probs=148.0
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCc-cccccccCC-ccCEEEEccCccccCCCCceEEEEEecCCCccccccchhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTH-FVPMGVFGS-IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAF 78 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~-~~~~~~~~~-~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~ 78 (233)
++|+++|++||++||+||+|.++.+++.. +.++..++. .+++|+++||||.|++||+|+||+++++ ++++. +
T Consensus 188 ~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~--~li~~---l- 261 (388)
T PRK07366 188 QEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNMGGFRIGFAIGNA--QLIQA---L- 261 (388)
T ss_pred HHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeecccccCCcchhheehcCCH--HHHHH---H-
Confidence 36899999999999999999999987643 445555544 3578999999999999999999999887 34421 1
Q ss_pred hhhhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecC
Q 047983 79 FHSISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGS 158 (233)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~ 158 (233)
..++.....+.....+..+++.+. ..++++++.++.++++++.+.+.|+++ ++. +..|+||+|+|
T Consensus 262 -------~~~~~~~~~~~~~~~~~~a~~~l~--~~~~~l~~~~~~~~~~r~~l~~~L~~~-~~~-~~~p~~g~f~~---- 326 (388)
T PRK07366 262 -------RQVKAVVDFNQYRGILNGAIAALT--GPQATVQQTVQIFRQRRDAFINALHQI-GWP-VPLPEATMYVW---- 326 (388)
T ss_pred -------HHHHhhcccCCCHHHHHHHHHHHh--CcHHHHHHHHHHHHHHHHHHHHHHHHC-CCc-ccCCCeeEEEE----
Confidence 222222222211111225566653 246799999999999999999999887 554 36799999999
Q ss_pred CCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC--CCcEEEEeecCHHHHHHHHHHHHHHH
Q 047983 159 EDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL--KDWLRITFAVEPSAFEIGLGRMKAFY 226 (233)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~~Rl~~~~~~~~l~~~~~~l~~~l 226 (233)
++++... . .++.+++.++++++||.|+||+.|+. .+|+||+++.+.+++++++++|.+++
T Consensus 327 -----~~~~~~~--~-~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~l~rl~~~l 388 (388)
T PRK07366 327 -----AKLPEPW--Q-GNSVEFCTQLVAQTGVAASPGSGFGKSGEGYVRFALVHDPDILEEAVERIAAFL 388 (388)
T ss_pred -----EECCccc--C-CCHHHHHHHHHHhCCEEEeCchHhCcCCCCeEEEEecCCHHHHHHHHHHHHHhC
Confidence 6554210 1 13567777888899999999999975 58999999988999999999998763
No 19
>PRK09148 aminotransferase; Validated
Probab=99.97 E-value=4.6e-29 Score=219.75 Aligned_cols=202 Identities=17% Similarity=0.321 Sum_probs=154.3
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCC-ccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGS-IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
+|+++|++||++||+||+|.++.+++..+.++..++. .+++|+++||||.|++||+|+||+++++ .+++. +
T Consensus 189 ~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGlR~G~~v~~~--~~i~~---l--- 260 (405)
T PRK09148 189 DVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAGWRMGFAVGNE--RLIAA---L--- 260 (405)
T ss_pred HHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCccCcEEEEeccccccCCcchheeeeeCCH--HHHHH---H---
Confidence 6899999999999999999999887644444544432 4578999999999999999999999977 44431 1
Q ss_pred hhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCCC
Q 047983 81 SISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSED 160 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~ 160 (233)
.+++.+...+.+.+.| .++..+++. .++++++.++.++++++.+.+.|+++ ++. +..|+||+|+|
T Consensus 261 -----~~~~~~~~~~~~~~~q-~~~~~~L~~-~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~-~~~p~~g~f~~------ 325 (405)
T PRK09148 261 -----TRVKSYLDYGAFTPIQ-VAATAALNG-PQDCIAEMRELYKKRRDVLVESFGRA-GWD-IPPPAASMFAW------ 325 (405)
T ss_pred -----HHHHHHhccCCChHHH-HHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHc-CCc-cCCCCeeEEEE------
Confidence 3333333444444444 444555543 36789999999999999999999886 454 36799999999
Q ss_pred cccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC--CCcEEEEeecCHHHHHHHHHHHHHHHHHHhh
Q 047983 161 KCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL--KDWLRITFAVEPSAFEIGLGRMKAFYYRHAK 231 (233)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~~Rl~~~~~~~~l~~~~~~l~~~l~~~~~ 231 (233)
++++... ... ++.++...+++++||.|+||+.|+. ++|+||+++.+.+.+.+++++|.+++.++..
T Consensus 326 ---~~l~~~~-~~~-~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ri~~~~~~~~l~~al~~l~~~l~~~~~ 393 (405)
T PRK09148 326 ---APIPEAF-RHL-GSLEFSKLLVEKADVAVAPGVGFGEHGDGYVRIALVENEQRIRQAARNIKRFLSSADE 393 (405)
T ss_pred ---EECCCcc-CCC-CHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHHHHH
Confidence 6554211 011 2567777788889999999999975 5899999998899999999999999988753
No 20
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.97 E-value=3.4e-29 Score=219.12 Aligned_cols=195 Identities=25% Similarity=0.500 Sum_probs=149.1
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccC-CccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFG-SIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|+++|++|+++||+||+|.++.+++ .+.++..+. ..+++|+++||||.|++||+|+||+++++ .+++. +
T Consensus 185 ~~l~~~a~~~~~~ii~De~y~~~~~~~-~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~v~~~--~~~~~---~-- 256 (384)
T PRK06348 185 EEIAKIAIEYDLFIISDEVYDGFSFYE-DFVPMATLAGMPERTITFGSFSKDFAMTGWRIGYVIAPD--YIIET---A-- 256 (384)
T ss_pred HHHHHHHHHCCeEEEEecccccceeCC-CccchhhcCCCcCcEEEEecchhccCCccccceeeecCH--HHHHH---H--
Confidence 368999999999999999999999875 333454444 25789999999999999999999999987 34321 1
Q ss_pred hhhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCC
Q 047983 80 HSISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSE 159 (233)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~ 159 (233)
..+.....++.+...| .+.+.++. ..++++++.++.+++|++.+.+.|+.++++.+ .+|+||+|+|
T Consensus 257 ------~~~~~~~~~~~~~~~q-~~~~~~l~-~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~-~~p~gg~~~~----- 322 (384)
T PRK06348 257 ------KIINEGICFSAPTISQ-RAAIYALK-HRDTIVPLIKEEFQKRLEYAYKRIESIPNLSL-HPPKGSIYAF----- 322 (384)
T ss_pred ------HHHHHhccCCCCHHHH-HHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHhcCCCcee-ccCCeeEEEE-----
Confidence 2333333344444444 44444443 34678899999999999999999988766553 7899999999
Q ss_pred CcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC--CCcEEEEeecCHHHHHHHHHHHHHH
Q 047983 160 DKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL--KDWLRITFAVEPSAFEIGLGRMKAF 225 (233)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~~Rl~~~~~~~~l~~~~~~l~~~ 225 (233)
++++... . ++.+++..+++++||.|.||+.|+. .+++|+|++.+.+++++++++|.++
T Consensus 323 ----~~~~~~~---~-~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~al~~l~~~ 382 (384)
T PRK06348 323 ----INIKKTG---L-SSVEFCEKLLKEAHVLVIPGKAFGESGEGYIRLACTVGIEVLEEAFNRIEKM 382 (384)
T ss_pred ----EecccCC---C-CHHHHHHHHHHhCCEEEcCchhhccCCCCeEEEEecCCHHHHHHHHHHHHhh
Confidence 6654211 1 4677788888889999999999986 5899999988899999999999754
No 21
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.97 E-value=3.6e-29 Score=209.95 Aligned_cols=198 Identities=24% Similarity=0.406 Sum_probs=164.4
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCc--cCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSI--VPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~--~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
+|.++|++||+.||+||+|.+++++|+.+.++.++++. ++.|++.|.||+|+++|+++++++++++ -.+. ++.
T Consensus 182 ~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~--~lr~-~~~-- 256 (388)
T COG1168 182 KIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNR--ELRA-KFL-- 256 (388)
T ss_pred HHHHHHHHcCCEEEeecccccccccCCCccchhhcChhhhcceEEEeeccccccchhhhheeEEecCH--HHHH-HHH--
Confidence 68999999999999999999999999888888888764 8999999999999999999999999984 2211 222
Q ss_pred hhhhhHHhhhhhhhhccCcchHH--HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhc-CCCcccccCCCccEEEEEe
Q 047983 80 HSISLNMRMDDYLLLSESVYTTV--GAVPQILEKTEEEFFSKITDILREAADICCDRLKE-IPCITCPKKPEGSMFVMYC 156 (233)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~g~~~~~~ 156 (233)
.++...... +++... +..+++ ..+.+|++++.++++.|++++.+.+++ +|++.. ..|+|.|.+|
T Consensus 257 ------~~l~~~~~~--~~n~lg~~A~~aAY--~~G~~WLd~L~~yl~~N~~~~~~~l~~~~P~v~v-~~p~gTYL~W-- 323 (388)
T COG1168 257 ------KRLKRNGLH--GPSALGIIATEAAY--NQGEPWLDELLEYLKDNRDYVADFLNKHLPGVKV-TEPQGTYLAW-- 323 (388)
T ss_pred ------HHHHHhcCC--CCchHHHHHHHHHH--HhchHHHHHHHHHHHHHHHHHHHHHHhhCCCcEE-ecCCCceeee--
Confidence 333321112 233333 555565 567899999999999999999999988 889886 8999999999
Q ss_pred cCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC--CCcEEEEeecCHHHHHHHHHHHHHHHHH
Q 047983 157 GSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL--KDWLRITFAVEPSAFEIGLGRMKAFYYR 228 (233)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~~Rl~~~~~~~~l~~~~~~l~~~l~~ 228 (233)
++++.+ ++ ++.+....++.+.+|.+.+|+.||. ++|+|++++++.+.++++++||...++.
T Consensus 324 ---------LD~r~l-~l-~d~~l~~~ll~~akVal~~G~~FG~~g~gf~RlN~acpr~~L~eal~ri~~al~~ 386 (388)
T COG1168 324 ---------LDCREL-GL-DDSELAEFLLEEAKVALSPGSTFGEEGSGFVRLNFACPRAILEEALERLKRALKK 386 (388)
T ss_pred ---------eecccc-CC-ChHHHHHHHHHhhcEeccCCCccCcCCCceEEEecCCCHHHHHHHHHHHHHHHhc
Confidence 888775 33 4678888999999999999999997 6899999999999999999999988764
No 22
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.97 E-value=6.7e-29 Score=217.60 Aligned_cols=197 Identities=21% Similarity=0.361 Sum_probs=150.5
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCcccccccc-CCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVF-GSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
+|+++|+++|++||+||+|.++.+++....++..+ +...++|+++||||.|++||+|+||+++++ +++
T Consensus 184 ~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~--~~~--------- 252 (389)
T PRK05957 184 AVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFASWRIGYMVIPI--HLL--------- 252 (389)
T ss_pred HHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhccCccceeEEEecCH--HHH---------
Confidence 68999999999999999999999875433333333 455789999999999999999999999987 344
Q ss_pred hhhhHHhhhhhh---hhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEec
Q 047983 81 SISLNMRMDDYL---LLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCG 157 (233)
Q Consensus 81 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~ 157 (233)
.++.... ..+.+...| .++...++. ...++++.++.++++++.+.+.|++++++..+.+|+||+|+|
T Consensus 253 -----~~~~~~~~~~~~~~~~~~q-~~~~~~l~~-~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~gg~~~~--- 322 (389)
T PRK05957 253 -----EAIKKIQDTILICPPVVSQ-YAALGALQV-GKSYCQQHLPEIAQVRQILLKSLGQLQDRCTLHPANGAFYCF--- 322 (389)
T ss_pred -----HHHHHHHhhcccCCCcHHH-HHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHHhcCCCccccCCCeeEEEE---
Confidence 3333322 233333344 444444432 345778888889999999999998876642346799999999
Q ss_pred CCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC--CCcEEEEeec-CHHHHHHHHHHHHHHHHHHh
Q 047983 158 SEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL--KDWLRITFAV-EPSAFEIGLGRMKAFYYRHA 230 (233)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~~Rl~~~~-~~~~l~~~~~~l~~~l~~~~ 230 (233)
++++. ++ ++.+++.++++++||.+.||+.|+. ++|+|++++. +.+++++++++|.+.++.+-
T Consensus 323 ------~~~~~----~~-~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~l~~~~~~l~~~~~~~~ 387 (389)
T PRK05957 323 ------LKVNT----DL-NDFELVKQLIREYRVAVIPGTTFGMKNGCYLRIAYGALQKATAKEGIERLVQGLKTIV 387 (389)
T ss_pred ------EeCCC----CC-ChHHHHHHHHHHCCEEEccchhhCCCCCCEEEEEEecCCHHHHHHHHHHHHHHHHhhh
Confidence 66543 22 4778888888889999999999976 4699999986 89999999999999987753
No 23
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.96 E-value=8.6e-29 Score=220.07 Aligned_cols=202 Identities=22% Similarity=0.332 Sum_probs=153.6
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCcccccccc----C--C-ccCEEEEccCccccCCCCceEEEEEecCCCccccc
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVF----G--S-IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQD 73 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~----~--~-~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~ 73 (233)
++|+++|++||++||+||+|.++.|++.++.++..+ + + .++++++.|+||.|++||+|+||+++.++
T Consensus 223 ~~l~~~~~~~~i~lI~DEiYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~~GlRvG~ivs~n~------ 296 (447)
T PLN02607 223 EDILDFVVRKNIHLVSDEIYSGSVFSASEFVSVAEIVEARGYKGVAERVHIVYSLSKDLGLPGFRVGTIYSYND------ 296 (447)
T ss_pred HHHHHHHHHCCCEEEEeccccccccCCCCcccHHHHHhhcCCCCCcCcEEEEEcchhcCCCCcceEEEEEEcCH------
Confidence 368999999999999999999999887555555432 1 1 46899999999999999999999999652
Q ss_pred cchhhhhhhhhHHhhhhhhhh-ccCcchHHHHHHHHhhhcH--HHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCcc
Q 047983 74 LGVAFFHSISLNMRMDDYLLL-SESVYTTVGAVPQILEKTE--EEFFSKITDILREAADICCDRLKEIPCITCPKKPEGS 150 (233)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g 150 (233)
.++ ..++....+ ..+..+| .+++.++++.. ++++...+++++++++.+.+.|++. ++. +.+|+||
T Consensus 297 -~l~--------~~~~~~~~~~~~s~~~q-~~~~~~L~d~~~~~~~l~~~r~~l~~~~~~~~~~L~~~-gi~-~~~~~ag 364 (447)
T PLN02607 297 -KVV--------TTARRMSSFTLVSSQTQ-HLLASMLSDEEFTENYIRTNRERLRKRYEMIVQGLRRA-GIE-CLKGNAG 364 (447)
T ss_pred -HHH--------HHHHHHhhcCCCCHHHH-HHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCC-cccCCee
Confidence 222 333332222 2222333 67777776642 4788999999999999999999986 555 4789999
Q ss_pred EEEEEecCCCcccccccccccC--C-CCChHHHHHHHHhccCEEEECCcccCC--CCcEEEEeec-CHHHHHHHHHHHHH
Q 047983 151 MFVMYCGSEDKCLLKLNYSLLE--G-INSDTEFALKLAKEESIIVLPGITVGL--KDWLRITFAV-EPSAFEIGLGRMKA 224 (233)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~~Rl~~~~-~~~~l~~~~~~l~~ 224 (233)
+|+| ++++ ... . ...+.++..++++++||.|.||+.|+. .+|+|++++. +++.++++++||.+
T Consensus 365 ~fvw---------~~L~--~~~~~~~~~~e~~l~~~ll~~~gV~v~pG~~f~~~~~g~fRi~fa~~~~~~l~~gl~Ri~~ 433 (447)
T PLN02607 365 LFCW---------MNLS--PLLETPTREGELALWDSILREVKLNISPGSSCHCSEPGWFRVCFANMSEDTLEVALKRIHR 433 (447)
T ss_pred EEEE---------EEch--HhhcCCCchhHHHHHHHHHHhCCEEEcCccccCCCCCCEEEEEeccCCHHHHHHHHHHHHH
Confidence 9999 5543 211 0 111335556777788999999999975 6899999996 89999999999999
Q ss_pred HHHHHhh
Q 047983 225 FYYRHAK 231 (233)
Q Consensus 225 ~l~~~~~ 231 (233)
++++++.
T Consensus 434 ~l~~~~~ 440 (447)
T PLN02607 434 FMDRRKT 440 (447)
T ss_pred HHHHHHh
Confidence 9988864
No 24
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.96 E-value=1.1e-28 Score=221.58 Aligned_cols=207 Identities=22% Similarity=0.325 Sum_probs=149.5
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCC-Cccccccc----cCCc----cCEEEEccCccc-cCCCCceEEEEEe---cCC
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGN-THFVPMGV----FGSI----VPVLTLGSISKR-WIVPGWRLGWLVT---SDP 67 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~-~~~~~~~~----~~~~----~~~i~~~s~sK~-~~~~G~R~G~~~~---~~~ 67 (233)
++|+++|++||++||+||+|.++.|++ ..+.++.. +... .++|+++||||. +++||||+||+++ ++
T Consensus 241 ~~i~~~a~~~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p~- 319 (481)
T PTZ00377 241 EEIIKFCYEKGIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIPP- 319 (481)
T ss_pred HHHHHHHHHCCCEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEEEEEeCCCH-
Confidence 478999999999999999999999854 33444432 2221 379999999997 6999999999997 44
Q ss_pred CccccccchhhhhhhhhHHhhhhhhhhccCcchHHHHHHHHhhh-----c----HHHHHHHHHHHHHHHHHHHHHHhhcC
Q 047983 68 NGILQDLGVAFFHSISLNMRMDDYLLLSESVYTTVGAVPQILEK-----T----EEEFFSKITDILREAADICCDRLKEI 138 (233)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----~----~~~~~~~~~~~~~~~~~~l~~~L~~~ 138 (233)
+++++ + .+... ...+.+...| .++..+++. . ..+++++.++.+++|++.+.+.|+++
T Consensus 320 -~li~~--l---------~~~~~-~~~~~~~~~Q-~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~ 385 (481)
T PTZ00377 320 -EVREQ--I---------YKLAS-INLCSNVVGQ-LMTGLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELNKI 385 (481)
T ss_pred -HHHHH--H---------HHHhh-eecCCChHHH-HHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 44432 1 22222 1234444444 444555532 1 22345555567899999999999988
Q ss_pred CCcccccCCCccEEEEEecCCCccccccccccc-------CCCCChHHHHHHHHhccCEEEECCcccCC---CCcEEEEe
Q 047983 139 PCITCPKKPEGSMFVMYCGSEDKCLLKLNYSLL-------EGINSDTEFALKLAKEESIIVLPGITVGL---KDWLRITF 208 (233)
Q Consensus 139 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~ll~~~gi~v~pg~~f~~---~~~~Rl~~ 208 (233)
+++.+ ..|+||+|+| ++++.+.. .++.++..++.++|+++||.++||+.|+. .+|+|+|+
T Consensus 386 ~g~~~-~~p~gg~fl~---------~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~~~~~~~~Rls~ 455 (481)
T PTZ00377 386 EGVSC-QPVEGAMYAF---------PRIELPEKAIQEAKERGLAPDVLYCLELLESTGIVVVPGSGFGQKPGTYHFRITI 455 (481)
T ss_pred CCcEe-ecCCeeEEEE---------eeccCchhhHHHHHhcCCCcHHHHHHHHHHHcCEEEeCCcccCCCCCCCEEEEEE
Confidence 77775 7899999999 65543210 01223566788999999999999999984 46999999
Q ss_pred ecCHHHHHHHHHHHHHHHHHHhhc
Q 047983 209 AVEPSAFEIGLGRMKAFYYRHAKK 232 (233)
Q Consensus 209 ~~~~~~l~~~~~~l~~~l~~~~~~ 232 (233)
+.++++++++++||.++++++.++
T Consensus 456 ~~~~e~l~~~l~rl~~~~~~~~~~ 479 (481)
T PTZ00377 456 LPPEEQIEEMVKKIKEFHESFMKK 479 (481)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHh
Confidence 988889999999999999987654
No 25
>PRK09082 methionine aminotransferase; Validated
Probab=99.96 E-value=2.5e-29 Score=220.10 Aligned_cols=195 Identities=18% Similarity=0.315 Sum_probs=150.8
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCC-ccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGS-IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|+++|++||+++|+||+|.++.+++....++..... .+++|+++||||.|++||+|+||+++++ ++++. +
T Consensus 186 ~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~iv~~~--~l~~~---~-- 258 (386)
T PRK09082 186 RALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVTGWKVGYCVAPA--ALSAE---F-- 258 (386)
T ss_pred HHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhccchhhhhhhhhCCH--HHHHH---H--
Confidence 36899999999999999999999997655555555443 5789999999999999999999999987 45432 1
Q ss_pred hhhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCC
Q 047983 80 HSISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSE 159 (233)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~ 159 (233)
.+...+..++.+...| .+++.++.. .++++++.++.+++|++.+.+.|++. ++.. .+|+||+|+|
T Consensus 259 ------~~~~~~~~~~~~~~~q-~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~-~~~~g~~~~~----- 323 (386)
T PRK09082 259 ------RKVHQYNTFTVNTPAQ-LALADYLRA-EPEHYLELPAFYQAKRDRFRAALANS-RFKL-LPCEGTYFQL----- 323 (386)
T ss_pred ------HHHHhhhcCCCChHHH-HHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHHhC-CCcc-cCCCeeEEEE-----
Confidence 2333333344444444 556666642 46788999999999999999999885 5553 6889999999
Q ss_pred CcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC----CCcEEEEeecCHHHHHHHHHHHHH
Q 047983 160 DKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL----KDWLRITFAVEPSAFEIGLGRMKA 224 (233)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~----~~~~Rl~~~~~~~~l~~~~~~l~~ 224 (233)
++++ +..+. ++.+++.++++++||.+.||+.|+. .+|+|+|++.+++.+++++++|++
T Consensus 324 ----~~~~--~~~~~-~~~~~~~~l~~~~~v~v~pg~~f~~~~~~~~~~Ri~~~~~~~~l~~~~~rl~~ 385 (386)
T PRK09082 324 ----VDYS--AISDL-DDVEFCQWLTREHGVAAIPLSVFYADPFPHRLVRLCFAKQEETLDAAAERLCQ 385 (386)
T ss_pred ----Eecc--ccCCC-CHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCEEEEEecCCHHHHHHHHHHHhh
Confidence 5553 21122 4677888888899999999999953 479999999999999999999975
No 26
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.96 E-value=8.5e-29 Score=217.63 Aligned_cols=193 Identities=20% Similarity=0.330 Sum_probs=149.2
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCC-ccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGS-IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|+++|++||++||+||+|.++.+++..+.++..++. .+++|+++||||.|++||+|+||+++++ ++++. +
T Consensus 189 ~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~~i~~~--~l~~~---~-- 261 (399)
T PRK07681 189 KEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSKSYSLAGSRIGYMIGNE--EIVRA---L-- 261 (399)
T ss_pred HHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCCCcccEEEEeecccccCCccceeEEEecCH--HHHHH---H--
Confidence 36899999999999999999999987655555555543 4689999999999999999999999876 44431 1
Q ss_pred hhhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCC
Q 047983 80 HSISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSE 159 (233)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~ 159 (233)
........++.+...| .++..++... .+++++.++.++++++.+.+.|++. ++.. ..|+||+|+|
T Consensus 262 ------~~~~~~~~~~~s~~~q-~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~p~~g~f~~----- 326 (399)
T PRK07681 262 ------TQFKSNTDYGVFLPIQ-KAACAALRNG-AAFCEKNRGIYQERRDTLVDGFRTF-GWNV-DKPAGSMFVW----- 326 (399)
T ss_pred ------HHHHhhcccCCCHHHH-HHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHC-CCcc-cCCCeeeEEE-----
Confidence 2222222334444444 4455555433 4788999999999999999999887 5553 6789999999
Q ss_pred CcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC--CCcEEEEeecCHHHHHHHHHHHHH
Q 047983 160 DKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL--KDWLRITFAVEPSAFEIGLGRMKA 224 (233)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~~Rl~~~~~~~~l~~~~~~l~~ 224 (233)
++++. +. ++.+++.++++++||.|.||+.|+. ++|+|++++.+.+++++++++|.+
T Consensus 327 ----~~l~~----~~-~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~~~~l~~l~~ 384 (399)
T PRK07681 327 ----AEIPK----GW-TSLSFAYALMDRANVVVTPGHAFGPHGEGFVRIALVQDEEVLQQAVENIRN 384 (399)
T ss_pred ----EECCC----CC-CHHHHHHHHHHhCCEEEeCChhhCcCCCCeEEEEecCCHHHHHHHHHHHHH
Confidence 66542 12 4678888888879999999999985 579999999888999999999987
No 27
>PRK07682 hypothetical protein; Validated
Probab=99.96 E-value=4.6e-29 Score=217.73 Aligned_cols=198 Identities=21% Similarity=0.430 Sum_probs=150.7
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCC-ccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGS-IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|+++|++|+++||+||+|.++.+++. +.++..+.. .+++++++||||.|++||+|+||+++++ ++++. +
T Consensus 177 ~~l~~~~~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~--~~i~~--l--- 248 (378)
T PRK07682 177 EEIAVIVEKHDLIVLSDEIYAELTYDEA-YTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAAPV--YFSEA--M--- 248 (378)
T ss_pred HHHHHHHHHcCcEEEEehhhhhcccCCC-CCChhhcccccCCEEEEecCcccccChhhhhhhhhcCH--HHHHH--H---
Confidence 3689999999999999999999998763 334444432 4789999999999999999999999987 44432 1
Q ss_pred hhhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCC
Q 047983 80 HSISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSE 159 (233)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~ 159 (233)
.....+..++.+...| .+...+++. ...++++.++.++++++.+.+.|+++ ++. +..|+||+|+|
T Consensus 249 ------~~~~~~~~~~~~~~~q-~a~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~-~~~p~g~~~~~----- 313 (378)
T PRK07682 249 ------LKIHQYSMMCAPTMAQ-FAALEALRA-GNDDVIRMRDSYRKRRNFFVTSFNEI-GLT-CHVPGGAFYAF----- 313 (378)
T ss_pred ------HHHHHhhccCCCHHHH-HHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHHHC-CCc-cCCCCeeEEEE-----
Confidence 2222222233333333 555555543 34578899999999999999999987 555 37899999999
Q ss_pred CcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC--CCcEEEEeecCHHHHHHHHHHHHHHHHHH
Q 047983 160 DKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL--KDWLRITFAVEPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~~Rl~~~~~~~~l~~~~~~l~~~l~~~ 229 (233)
+.++.. +. ++.+++.++++++||.+.||+.|+. .+|+|||++.+.+++++++++|.++++++
T Consensus 314 ----~~~~~~---~~-~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~l~~~ 377 (378)
T PRK07682 314 ----PSISST---GL-SSEEFAEQLLLEEKVAVVPGSVFGESGEGFIRCSYATSLEQLQEAMKRMKRFVENK 377 (378)
T ss_pred ----EeccCC---CC-CHHHHHHHHHHhCCEEEcCchhhCcCCCCeEEEEeCCCHHHHHHHHHHHHHHHhhc
Confidence 554311 11 4667777878788999999999975 68999999998899999999999998765
No 28
>PRK12414 putative aminotransferase; Provisional
Probab=99.96 E-value=1.2e-28 Score=215.76 Aligned_cols=194 Identities=19% Similarity=0.397 Sum_probs=146.6
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCC-ccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGS-IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|+++|++||++||+||+|.++.|++....++..... .+++|+++||||.|++||+|+||+++++ .+++. +
T Consensus 185 ~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRiG~~v~~~--~l~~~---l-- 257 (384)
T PRK12414 185 ARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTGWRVGYCLAPA--ELMDE---I-- 257 (384)
T ss_pred HHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccccCccceEEEEecCH--HHHHH---H--
Confidence 36889999999999999999999987654445554432 4689999999999999999999999987 44431 1
Q ss_pred hhhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCC
Q 047983 80 HSISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSE 159 (233)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~ 159 (233)
.........+.+...| .++..++.... +..+.++.++++++.+.+.|++. ++.+ .+|+||+|+|
T Consensus 258 ------~~~~~~~~~~~s~~~q-~a~~~~l~~~~--~~~~~~~~~~~~r~~l~~~L~~~-g~~~-~~~~gg~~~~----- 321 (384)
T PRK12414 258 ------RKVHQFMVFSADTPMQ-HAFAEALAEPA--SYLGLGAFYQRKRDLLARELAGS-RFEL-LPSEGSFFML----- 321 (384)
T ss_pred ------HHHHhheecCCCcHHH-HHHHHHhcCCh--HHHHHHHHHHHHHHHHHHHHHhC-CCee-cCCCcceEEE-----
Confidence 2333333444445555 55556664432 33467889999999999999987 4553 6899999999
Q ss_pred CcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC----CCcEEEEeecCHHHHHHHHHHHHH
Q 047983 160 DKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL----KDWLRITFAVEPSAFEIGLGRMKA 224 (233)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~----~~~~Rl~~~~~~~~l~~~~~~l~~ 224 (233)
++++ ..... ++.+++.++++++||.+.||+.|+. .+|+|++++.++++++++++||.+
T Consensus 322 ----~~~~--~~~~~-~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRis~~~~~~~~~~~~~rl~~ 383 (384)
T PRK12414 322 ----ARFR--HFSDE-SDSDFVLRLIRDARVATIPLSAFYTDGTDTGLIRLSFSKDDATLVEGARRLCS 383 (384)
T ss_pred ----Eccc--ccCCC-CHHHHHHHHHHhCCEEEecchhhcCCCCCCCEEEEEecCCHHHHHHHHHHHhh
Confidence 5443 21111 3678888889999999999999963 479999999999999999999974
No 29
>PLN02231 alanine transaminase
Probab=99.96 E-value=2e-28 Score=221.58 Aligned_cols=208 Identities=20% Similarity=0.297 Sum_probs=151.0
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCC-CccccccccC-------CccCEEEEccCcccc-CCCCceEEEEEecC-CCcc
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGN-THFVPMGVFG-------SIVPVLTLGSISKRW-IVPGWRLGWLVTSD-PNGI 70 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~-~~~~~~~~~~-------~~~~~i~~~s~sK~~-~~~G~R~G~~~~~~-~~~~ 70 (233)
++|+++|++||++||+||+|.++.|++ ..+.++..+. ...++|+++|+||.| +.||+|+||+++++ ++++
T Consensus 294 ~~Iv~~a~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRiGy~~~~~~~~~l 373 (534)
T PLN02231 294 RDIVEFCKQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFTSDV 373 (534)
T ss_pred HHHHHHHHHcCCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccceEEEEEecCCHHH
Confidence 378999999999999999999999963 4555655442 123699999999965 89999999998742 1134
Q ss_pred ccccchhhhhhhhhHHhhhhhhhhccCcchHHHHHHHHhhh------cHH---HHHHHHHHHHHHHHHHHHHHhhcCCCc
Q 047983 71 LQDLGVAFFHSISLNMRMDDYLLLSESVYTTVGAVPQILEK------TEE---EFFSKITDILREAADICCDRLKEIPCI 141 (233)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------~~~---~~~~~~~~~~~~~~~~l~~~L~~~~~~ 141 (233)
++. + ..+.. ...+++...| .+...+++. ..+ ++.+.+++.|++|++.+.+.|++++++
T Consensus 374 ~~~--l---------~k~~~-~~~~s~~~~Q-~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~~~gi 440 (534)
T PLN02231 374 REQ--I---------YKVAS-VNLCSNISGQ-ILASLVMSPPKPGDESYESYMAEKDGILSSLARRAKTLEDALNSLEGV 440 (534)
T ss_pred HHH--H---------HHHHh-hhcCCChHHH-HHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 431 1 22222 2333333344 444444432 122 345567899999999999999998777
Q ss_pred ccccCCCccEEEEEecCCCccccccccccc-------CCCCChHHHHHHHHhccCEEEECCcccCC---CCcEEEEeecC
Q 047983 142 TCPKKPEGSMFVMYCGSEDKCLLKLNYSLL-------EGINSDTEFALKLAKEESIIVLPGITVGL---KDWLRITFAVE 211 (233)
Q Consensus 142 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~ll~~~gi~v~pg~~f~~---~~~~Rl~~~~~ 211 (233)
.+ .+|+||||+| +++.++.. .+..++..++.++++++||.++||+.|+. ..++|+++..+
T Consensus 441 ~~-~~p~Ggfylw---------~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~~~g~~~~Rit~~~~ 510 (534)
T PLN02231 441 TC-NKAEGAMYLF---------PRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQVPGTWHFRCTILPQ 510 (534)
T ss_pred ee-cCCCeeeEEe---------ccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCCCCCCCeEEEEeCCC
Confidence 75 7899999999 66544321 01223556778899999999999999985 35799999989
Q ss_pred HHHHHHHHHHHHHHHHHHhh
Q 047983 212 PSAFEIGLGRMKAFYYRHAK 231 (233)
Q Consensus 212 ~~~l~~~~~~l~~~l~~~~~ 231 (233)
+++++++++||.+++++..+
T Consensus 511 ~e~l~eal~RL~~~~~~~~~ 530 (534)
T PLN02231 511 EDKIPAIVSRLTEFHKSFMD 530 (534)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999887754
No 30
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.96 E-value=2.4e-28 Score=219.58 Aligned_cols=203 Identities=20% Similarity=0.340 Sum_probs=151.0
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCC--------ccCEEEEccCccccCCCCceEEEEEecCCCcccc
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGS--------IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQ 72 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~--------~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~ 72 (233)
++|+++|++||++||+||+|.++.|++..+.++..+.. .++++++.||||.|++||+|+||++++++ .+.
T Consensus 222 ~~L~~~a~~~~i~lI~DEiY~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~li~~~~-~l~- 299 (496)
T PLN02376 222 TNLVRFVTRKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFND-SVV- 299 (496)
T ss_pred HHHHHHHHHcCCEEEEEcCccccccCCCCcccHHHhhccccccccCCCeEEEEEeccccCCCCcceEEEEEECCH-HHH-
Confidence 36899999999999999999999998766666554421 14678899999999999999999999762 222
Q ss_pred ccchhhhhhhhhHHhhhhhhhh-ccCcchHHHHHHHHhhhcH--HHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCc
Q 047983 73 DLGVAFFHSISLNMRMDDYLLL-SESVYTTVGAVPQILEKTE--EEFFSKITDILREAADICCDRLKEIPCITCPKKPEG 149 (233)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~ 149 (233)
..++..... ..+..+| .+++.++++.. ++++.++++.++++++.+.+.|++. ++.+ .+|+|
T Consensus 300 -------------~~~~~~~~~~~vs~~~Q-~a~~~~L~d~~~~~~~l~~~r~~l~~r~~~l~~~L~~~-gi~~-~~~~a 363 (496)
T PLN02376 300 -------------SCARKMSSFGLVSSQTQ-LMLASMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKKA-DIAC-LTSNA 363 (496)
T ss_pred -------------HHHHHHhhcCCCCHHHH-HHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCcc-cCCCc
Confidence 222222222 2223333 66777776542 4788889999999999999999886 5554 67999
Q ss_pred cEEEEEecCCCccccccccccc--CCCCChHHHHHHHHhccCEEEECCcccCC--CCcEEEEeec-CHHHHHHHHHHHHH
Q 047983 150 SMFVMYCGSEDKCLLKLNYSLL--EGINSDTEFALKLAKEESIIVLPGITVGL--KDWLRITFAV-EPSAFEIGLGRMKA 224 (233)
Q Consensus 150 g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~~Rl~~~~-~~~~l~~~~~~l~~ 224 (233)
|+|+| ++++.... ....++.++...+++++||.|.||+.|+. .+|+|||++. +++.++++++||.+
T Consensus 364 G~flw---------i~l~~~~~~~~~~~~e~~l~~~ll~~~gV~v~pGs~F~~~~~g~~Ri~fa~~~~~~l~~al~rl~~ 434 (496)
T PLN02376 364 GLFAW---------MDLRHLLRDRNSFESEIELWHIIIDKVKLNVSPGSSFRCTEPGWFRICFANMDDDTLHVALGRIQD 434 (496)
T ss_pred eEEEE---------EEchhhhccCCchhHHHHHHHHHHHcCCEEEeCccccCCCCCCEEEEEeeCCCHHHHHHHHHHHHH
Confidence 99999 54432100 01112356777778788999999999974 6899999996 88999999999999
Q ss_pred HHHHHh
Q 047983 225 FYYRHA 230 (233)
Q Consensus 225 ~l~~~~ 230 (233)
++.+.+
T Consensus 435 ~l~~~~ 440 (496)
T PLN02376 435 FVSKNK 440 (496)
T ss_pred HHHHhh
Confidence 997654
No 31
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.96 E-value=1.1e-28 Score=217.57 Aligned_cols=206 Identities=15% Similarity=0.113 Sum_probs=147.5
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCC-ccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGS-IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|+++|++||++||+||+|.+|.+++..+.++..++. .+++|+++||||.|++||+|+||+++++ ++++.+...+.
T Consensus 199 ~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~pGlRiG~~i~~~--~li~~~~~~~~ 276 (409)
T PRK07590 199 KAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEIEGARECAIEFRSFSKTAGFTGTRCAYTVVPK--ELKGKTSDGEG 276 (409)
T ss_pred HHHHHHHHHcCeEEEEEccchhhccCCCCCcchhhCCCcccceEEEecCccccCCcCceeEEEEcCH--HHhhhccccch
Confidence 36899999999999999999999887654455655544 3579999999999999999999999987 44431000000
Q ss_pred hhhhhHHhhhhhhh-hccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecC
Q 047983 80 HSISLNMRMDDYLL-LSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGS 158 (233)
Q Consensus 80 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~ 158 (233)
.............. .+.+...| .+++.++......++++.++.++++++.+.+.|++. ++. +..|+||+|+|
T Consensus 277 ~~~~~~~~~~~~~~~~~~s~~~q-~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~-~~~~~g~~f~w---- 349 (409)
T PRK07590 277 VSLNSLWNRRQSTKFNGVSYIVQ-RAAEAVYSPEGKAQIKELIDYYMENAKIIREGLESA-GFE-VYGGVNAPYIW---- 349 (409)
T ss_pred hhhHHHHHHHHhhcccCcCHHHH-HHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHhc-CCc-eecCCcceEEE----
Confidence 00000000111111 12333333 455555544456799999999999999999999987 454 36788999999
Q ss_pred CCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC--CCcEEEEeecCHHHHHHHHHHHHHH
Q 047983 159 EDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL--KDWLRITFAVEPSAFEIGLGRMKAF 225 (233)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~~Rl~~~~~~~~l~~~~~~l~~~ 225 (233)
++++. +. ++.++..++++++||.+.||+.|+. .+|+|||+..+++++++++++|.++
T Consensus 350 -----i~~~~----~~-~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~l~rl~~~ 408 (409)
T PRK07590 350 -----VKTPD----GM-SSWDFFDKLLQEANVVGTPGSGFGPSGEGYFRLSAFGSRENVLEAMERIKKA 408 (409)
T ss_pred -----EECCC----CC-CHHHHHHHHHHHCCEEEeChhHhCCCCCCEEEEEccCCHHHHHHHHHHHHhh
Confidence 65542 12 3567777888889999999999975 4799999877899999999999865
No 32
>PRK08912 hypothetical protein; Provisional
Probab=99.96 E-value=1.6e-28 Score=214.99 Aligned_cols=199 Identities=20% Similarity=0.366 Sum_probs=149.6
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCC-ccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGS-IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
+|+++|++||++||+||+|.++.+++..+.++..+.. .+++|+++|+||.|++||+|+||+++++ ++++. +
T Consensus 183 ~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~--~~~~~---l--- 254 (387)
T PRK08912 183 LLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLTGWKVGFVCAAP--PLLRV---L--- 254 (387)
T ss_pred HHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhccCcCceeEEEecCH--HHHHH---H---
Confidence 6899999999999999999999987644445544433 4789999999999999999999999987 44421 1
Q ss_pred hhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCCC
Q 047983 81 SISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSED 160 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~ 160 (233)
........++.++..+ .++...+. ..++++++.++.++++++.+.+.|+.. ++.. .+|+||+|+|
T Consensus 255 -----~~~~~~~~~~~~~~~q-~~~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~~g~~~l~------ 319 (387)
T PRK08912 255 -----AKAHQFLTFTTPPNLQ-AAVAYGLG-KPDDYFEGMRADLARSRDRLAAGLRRI-GFPV-LPSQGTYFLT------ 319 (387)
T ss_pred -----HHHHhhccccCChHHH-HHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHHHHhC-CCcc-cCCCcceEEE------
Confidence 2222222233333333 33333332 346788899999999999999999987 5554 6789999999
Q ss_pred cccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC----CCcEEEEeecCHHHHHHHHHHHHHHHHH
Q 047983 161 KCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL----KDWLRITFAVEPSAFEIGLGRMKAFYYR 228 (233)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~----~~~~Rl~~~~~~~~l~~~~~~l~~~l~~ 228 (233)
++++. .....++.+++.++++++||.|.||+.|+. .+|+|++++.+++.+++++++|.+++.+
T Consensus 320 ---~~l~~--~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~iRl~~~~~~~~l~~~l~rl~~~l~~ 386 (387)
T PRK08912 320 ---VDLAP--LGLAEDDVAFCRRLVEEAGVAAIPVSAFYEEDPVTSVVRFCFAKRDATLDEAVERLAAARRR 386 (387)
T ss_pred ---ecccc--cCCCCCHHHHHHHHHhcCCEEEecchhhCCCCCCCCEEEEEEeCCHHHHHHHHHHHHHHHhc
Confidence 55532 111124677888888889999999999953 5899999999899999999999998764
No 33
>PRK09265 aminotransferase AlaT; Validated
Probab=99.96 E-value=3.5e-28 Score=214.04 Aligned_cols=208 Identities=24% Similarity=0.417 Sum_probs=150.3
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|+++|+++|++||+||+|.++.+++....++..+....++|+++||||.|++||+|+||++++.+..+.+ .++
T Consensus 191 ~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~--~~~--- 265 (404)
T PRK09265 191 EEIVEIARQHNLIIFADEIYDKILYDGAVHISIASLAPDLLCVTFNGLSKAYRVAGFRVGWMVLSGPKKHAK--GYI--- 265 (404)
T ss_pred HHHHHHHHHCCCEEEEehhhhhccCCCCCcCCHHHcCCCceEEEEecchhhccCcccceEEEEEeCchHHHH--HHH---
Confidence 368899999999999999999999877555566656555679999999999999999999999754322221 122
Q ss_pred hhhhHHhhhhh--hhhccCcchHHHHHHHHhhhc-HHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEec
Q 047983 81 SISLNMRMDDY--LLLSESVYTTVGAVPQILEKT-EEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCG 157 (233)
Q Consensus 81 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~ 157 (233)
..+... ...+.+...| .++..++... ...+..+.++.+.++++.+.+.|++++++.. ..|+||+|+|
T Consensus 266 -----~~~~~~~~~~~~~~~~~q-~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~-~~p~~g~~l~--- 335 (404)
T PRK09265 266 -----EGLDMLASMRLCANVPAQ-HAIQTALGGYQSINELILPGGRLYEQRDRAWELLNAIPGVSC-VKPKGALYAF--- 335 (404)
T ss_pred -----HHHHHHhccccCCCcHHH-HHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCCCcc-cCCCcceEEE---
Confidence 222221 1233333444 4444444322 1122223345678889999999988767653 7899999999
Q ss_pred CCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC--CCcEEEEeecCHHHHHHHHHHHHHHHHHHh
Q 047983 158 SEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL--KDWLRITFAVEPSAFEIGLGRMKAFYYRHA 230 (233)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~~Rl~~~~~~~~l~~~~~~l~~~l~~~~ 230 (233)
++++.... +..++.+++.++++++||.|.||+.|+. .+|+|++++.+.+.+++++++|.++++.++
T Consensus 336 ------~~~~~~~~-~~~~~~~~~~~~l~~~gv~v~pg~~F~~~~~~~~Ri~~~~~~e~l~~~l~rl~~~l~~~~ 403 (404)
T PRK09265 336 ------PKLDPKVY-PIHDDEQFVLDLLLQEKVLLVQGTGFNWPEPDHFRIVTLPRVDDLEEAIGRIGRFLSGYR 403 (404)
T ss_pred ------EEeccccc-CCCCHHHHHHHHHHhCCEEEECchhhCCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhc
Confidence 66653211 1224677888999999999999999964 689999998899999999999999998764
No 34
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.96 E-value=3.2e-28 Score=217.72 Aligned_cols=203 Identities=19% Similarity=0.303 Sum_probs=151.4
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCcccccccc---------CCccCEEEEccCccccCCCCceEEEEEecCCCccc
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVF---------GSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGIL 71 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~---------~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~ 71 (233)
++|+++|++||++||+||+|.++.|++..+.++... +..+++++++||||.|++||+|+||+++++ ..+
T Consensus 214 ~~ll~~a~~~~~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~li~~~--~~l 291 (468)
T PLN02450 214 NLLVDFITAKNIHLISDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLGLPGFRVGAIYSND--EMV 291 (468)
T ss_pred HHHHHHHHHCCcEEEEEccccccccCCCCcccHHHHhhhcccccCCCCCcEEEEEeccccCCCCCccEEEEEECC--HHH
Confidence 368999999999999999999998876544443222 235789999999999999999999999986 221
Q ss_pred cccchhhhhhhhhHHhhhhhhhh-ccCcchHHHHHHHHhhhcH--HHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCC
Q 047983 72 QDLGVAFFHSISLNMRMDDYLLL-SESVYTTVGAVPQILEKTE--EEFFSKITDILREAADICCDRLKEIPCITCPKKPE 148 (233)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~ 148 (233)
. ..+...... +.+...| .+++.++++.. ..++++.++.++++++.+.+.|+++ ++. +.+|+
T Consensus 292 -----~--------~~~~~~~~~~~~s~~~Q-~a~~~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~~~-gi~-~~~~~ 355 (468)
T PLN02450 292 -----V--------SAATKMSSFGLVSSQTQ-YLLSALLSDKKFTKNYLEENQKRLKQRQKKLVSGLEAA-GIK-CLKSN 355 (468)
T ss_pred -----H--------HHHHHHhhcCCCCHHHH-HHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHc-CCc-ccCCC
Confidence 1 222222111 2233333 66677776542 2578999999999999999999988 565 37899
Q ss_pred ccEEEEEecCCCccccccccccc-CCCCChHHHHHHHHhccCEEEECCcccCC--CCcEEEEeec-CHHHHHHHHHHHHH
Q 047983 149 GSMFVMYCGSEDKCLLKLNYSLL-EGINSDTEFALKLAKEESIIVLPGITVGL--KDWLRITFAV-EPSAFEIGLGRMKA 224 (233)
Q Consensus 149 ~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~~Rl~~~~-~~~~l~~~~~~l~~ 224 (233)
||+|+| ++++.... ....+..++..++++++||.|.||+.|+. .+|+|++++. +++++++++++|++
T Consensus 356 ~g~flw---------i~l~~~~~~~~~~~~~~l~~~ll~~~gV~v~PG~~f~~~~~g~~Rl~f~~~~~~~l~~~l~ri~~ 426 (468)
T PLN02450 356 AGLFCW---------VDMRHLLKSNTFEAEMELWKKIVYEVKLNISPGSSCHCTEPGWFRVCFANMSEETLDLAMKRLKS 426 (468)
T ss_pred ceEEEE---------EEchHhcCcCCchHHHHHHHHHHHhCCEEEeCccccCCCCCCEEEEEecCCCHHHHHHHHHHHHH
Confidence 999999 55431110 01112356777888889999999999975 6899999996 89999999999999
Q ss_pred HHHHHh
Q 047983 225 FYYRHA 230 (233)
Q Consensus 225 ~l~~~~ 230 (233)
++.+..
T Consensus 427 ~l~~~~ 432 (468)
T PLN02450 427 FVESDS 432 (468)
T ss_pred HHHhcc
Confidence 987654
No 35
>PRK08960 hypothetical protein; Provisional
Probab=99.96 E-value=2.4e-28 Score=213.98 Aligned_cols=195 Identities=18% Similarity=0.325 Sum_probs=148.0
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHS 81 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~ 81 (233)
+|+++|++||++||+||+|.++.+++. ..++. ...+++|+++||||.||+||+|+||+++++ ++++. +
T Consensus 189 ~l~~~~~~~~~~li~De~Y~~~~~~~~-~~~~~--~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~--~~~~~---~---- 256 (387)
T PRK08960 189 ALSQALRARGGHLVVDEIYHGLTYGVD-AASVL--EVDDDAFVLNSFSKYFGMTGWRLGWLVAPP--AAVPE---L---- 256 (387)
T ss_pred HHHHHHHHcCCEEEEEccccccccCCC-CCChh--hccCCEEEEeecccccCCcccEEEEEEcCH--HHHHH---H----
Confidence 688899999999999999999988653 33333 234689999999999999999999999987 44421 1
Q ss_pred hhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCCCc
Q 047983 82 ISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSEDK 161 (233)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~ 161 (233)
..+......+.+...| .+...++.+...+++++.++.++++++.+.+.|+++ ++..+..|+||+|+|
T Consensus 257 ----~~~~~~~~~~~s~~~q-~a~~~~l~~~~~~~l~~~~~~~~~~~~~l~~~L~~~-~~~~~~~p~g~~f~~------- 323 (387)
T PRK08960 257 ----EKLAQNLYISASTPAQ-HAALACFEPETLAILEARRAEFARRRDFLLPALREL-GFGIAVEPQGAFYLY------- 323 (387)
T ss_pred ----HHHHhhhccCCCHHHH-HHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHhc-CCcCCcCCCeeEEEE-------
Confidence 2333333344444444 444444544456899999999999999999999887 443335689999999
Q ss_pred ccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC---CCcEEEEeecCHHHHHHHHHHHHHHHH
Q 047983 162 CLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL---KDWLRITFAVEPSAFEIGLGRMKAFYY 227 (233)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~---~~~~Rl~~~~~~~~l~~~~~~l~~~l~ 227 (233)
++++.. .. ++.+++.++++++||.|.||+.|+. .+|+|+|++.+.+.+++++++|.+++.
T Consensus 324 --~~~~~~---~~-~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~iRi~~~~~~~~l~~al~~l~~~~~ 386 (387)
T PRK08960 324 --ADISAF---GG-DAFAFCRHFLETEHVAFTPGLDFGRHQAGQHVRFAYTQSLPRLQEAVERIARGLR 386 (387)
T ss_pred --Eecccc---CC-CHHHHHHHHHHhCCEEEcCchHhCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHh
Confidence 655421 11 4667777888889999999999975 479999999989999999999988764
No 36
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.96 E-value=4.3e-28 Score=212.82 Aligned_cols=199 Identities=22% Similarity=0.401 Sum_probs=153.2
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCC-ccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGS-IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|+++|+++|++||+||+|.+|.+++..+.++..+.. .+++|+++|+||.|++||+|+||+++++. +++
T Consensus 185 ~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~~~~~~~-~~~-------- 255 (397)
T PRK07568 185 EMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSACGARIGCLISKNK-ELI-------- 255 (397)
T ss_pred HHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCCEEEEecchhhccCCCcceEEEecCCH-HHH--------
Confidence 36899999999999999999999987755555555543 57899999999999999999999998642 233
Q ss_pred hhhhhHHhhhhhh--hhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEec
Q 047983 80 HSISLNMRMDDYL--LLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCG 157 (233)
Q Consensus 80 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~ 157 (233)
..+.... .++.+...| .+++.+++. .+.++++.++.++++++.+.+.|++++++. +..|+||+|+|
T Consensus 256 ------~~~~~~~~~~~~~s~~~q-~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~p~g~~~~~--- 323 (397)
T PRK07568 256 ------AAAMKLCQARLSPPTLEQ-IGAAALLDT-PESYFDEVREEYKKRRDILYEELNKIPGVV-CEKPKGAFYII--- 323 (397)
T ss_pred ------HHHHHHhhccCCCCcHHH-HHHHHHhhC-CHHHHHHHHHHHHHHHHHHHHHHhcCCCce-ecCCCcceEEE---
Confidence 2222111 233333343 555666543 467899999999999999999998876665 37899999999
Q ss_pred CCCcccccccccccCCCCChHHHHHHHHhc-----cCEEEECCcccCC-----CCcEEEEeecCHHHHHHHHHHHHHHHH
Q 047983 158 SEDKCLLKLNYSLLEGINSDTEFALKLAKE-----ESIIVLPGITVGL-----KDWLRITFAVEPSAFEIGLGRMKAFYY 227 (233)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~-----~gi~v~pg~~f~~-----~~~~Rl~~~~~~~~l~~~~~~l~~~l~ 227 (233)
++++.. ++.++..+++++ +||.+.||+.|+. .+|+|++++.+.+++++++++|.++++
T Consensus 324 ------~~l~~~------~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls~~~~~~~~~~~~~~l~~~l~ 391 (397)
T PRK07568 324 ------AKLPVD------DAEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAYVLNEEDLKRAMEILKEALE 391 (397)
T ss_pred ------EecCCC------CHHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHHHH
Confidence 666421 366777777654 6999999999942 469999999888999999999999999
Q ss_pred HHhhc
Q 047983 228 RHAKK 232 (233)
Q Consensus 228 ~~~~~ 232 (233)
++...
T Consensus 392 ~~~~~ 396 (397)
T PRK07568 392 KYNKR 396 (397)
T ss_pred Hhhcc
Confidence 87643
No 37
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.96 E-value=2.5e-28 Score=214.17 Aligned_cols=201 Identities=18% Similarity=0.408 Sum_probs=151.7
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|+++|++||+++|+||+|.++.+++..+.++..... +++|+++|+||.|++||+|+||+++++ +++++ +
T Consensus 189 ~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~-~~~i~~~S~SK~~g~~GlRvG~~v~~~--~~~~~---~--- 259 (391)
T PRK07309 189 KALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEYLP-DQTILINGLSKSHAMTGWRIGLIFAPA--EFTAQ---L--- 259 (391)
T ss_pred HHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHhcc-CCEEEEecChhhccCccceeEEEEeCH--HHHHH---H---
Confidence 36899999999999999999999987654445544443 789999999999999999999999987 44432 1
Q ss_pred hhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCCC
Q 047983 81 SISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSED 160 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~ 160 (233)
.....+...+++...| .++..++.+. ..+....++.++++++.+.+.|++. ++.. ..|+||+|+|
T Consensus 260 -----~~~~~~~~~~~~~~~q-~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~-~~p~gg~~~~------ 324 (391)
T PRK07309 260 -----IKSHQYLVTAATTMAQ-FAAVEALTNG-KDDALPMKKEYIKRRDYIIEKMTDL-GFKI-IKPDGAFYIF------ 324 (391)
T ss_pred -----HHHHhhcccCCChHHH-HHHHHHHhCC-hhHHHHHHHHHHHHHHHHHHHHHHC-CCee-cCCCeeEEEE------
Confidence 2222222223333333 5555556443 3344678889999999999999887 4553 6899999999
Q ss_pred cccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC--CCcEEEEeecCHHHHHHHHHHHHHHHHHHhh
Q 047983 161 KCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL--KDWLRITFAVEPSAFEIGLGRMKAFYYRHAK 231 (233)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~~Rl~~~~~~~~l~~~~~~l~~~l~~~~~ 231 (233)
++++... . .++.+++.++++++||.|.||+.|+. .+|+|++++.+.+++++++++|.++++++++
T Consensus 325 ---~~l~~~~--~-~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~i~~l~~~~~~~~~ 391 (391)
T PRK07309 325 ---AKIPAGY--N-QDSFKFLQDFARKKAVAFIPGAAFGPYGEGYVRLSYAASMETIKEAMKRLKEYMEEHAG 391 (391)
T ss_pred ---EECCCCC--C-CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHHHhhcC
Confidence 6654211 1 13567777888889999999999976 6899999998889999999999999988764
No 38
>PRK08175 aminotransferase; Validated
Probab=99.96 E-value=2.6e-28 Score=214.27 Aligned_cols=200 Identities=21% Similarity=0.332 Sum_probs=151.6
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCC-ccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGS-IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|+++|++||++||+||+|.++.+++....++..+.. .+++|+++||||.||+||+|+||+++++ ++++. +
T Consensus 187 ~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~~~~--~l~~~---~-- 259 (395)
T PRK08175 187 EKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVGNP--ELVSA---L-- 259 (395)
T ss_pred HHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCCCcccCEEEEeeccccccCcchhheeeeCCH--HHHHH---H--
Confidence 37899999999999999999999987655555554432 4678999999999999999999999877 44431 1
Q ss_pred hhhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCC
Q 047983 80 HSISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSE 159 (233)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~ 159 (233)
.+...+...+.+.+.+..+. ..+. ..+++++.+++.++++++++.+.|+.+ ++. +..|+||+|+|
T Consensus 260 ------~~~~~~~~~~~~~~~q~~~~-~~l~-~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~-~~~p~~g~~i~----- 324 (395)
T PRK08175 260 ------ARIKSYHDYGTFTPLQVAAI-AALE-GDQQCVRDIAEQYKRRRDVLVKGLHEA-GWM-VEMPKASMYVW----- 324 (395)
T ss_pred ------HHHHhhcccCCCcHHHHHHH-HHHh-CcHHHHHHHHHHHHHHHHHHHHHHHHc-CCc-ccCCCEEEEEE-----
Confidence 23333333343344442333 4343 346789999999999999999999987 555 36789999999
Q ss_pred CcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC--CCcEEEEeecCHHHHHHHHHHHHHHHHH
Q 047983 160 DKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL--KDWLRITFAVEPSAFEIGLGRMKAFYYR 228 (233)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~~Rl~~~~~~~~l~~~~~~l~~~l~~ 228 (233)
++++... ...++.+++.++++++||.|.||+.|+. ++++|++++.+.+.+++++++|.+++.+
T Consensus 325 ----i~l~~~~--~~~~~~~~~~~l~~~~gv~v~p~~~f~~~~~~~lRis~~~~~~~~~~al~~l~~~l~~ 389 (395)
T PRK08175 325 ----AKIPEPY--AAMGSLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFALIENRDRIRQAIRGIKAMFRA 389 (395)
T ss_pred ----EECCccc--CCCCHHHHHHHHHHhCCEEEeCchhhCcCCCCeEEEEeCCCHHHHHHHHHHHHHHHHh
Confidence 6554211 0013567777788889999999999975 5799999988899999999999999875
No 39
>PRK08068 transaminase; Reviewed
Probab=99.96 E-value=2.8e-28 Score=213.60 Aligned_cols=193 Identities=20% Similarity=0.317 Sum_probs=144.9
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccc-cCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGV-FGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~-~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
+|+++|++||++||+||+|.++.+++..+.++.. .+..+++|+++||||.|++||+|+||+++++ ++++. +
T Consensus 191 ~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~--~l~~~---l--- 262 (389)
T PRK08068 191 ETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLSKTFNMAGWRVAFAVGNE--SVIEA---I--- 262 (389)
T ss_pred HHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCccCCEEEEecchhccCCccceeEeEecCH--HHHHH---H---
Confidence 6889999999999999999999887644444433 2345689999999999999999999999877 44431 1
Q ss_pred hhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCCC
Q 047983 81 SISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSED 160 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~ 160 (233)
.+.......+..+..+.++...+. ...++++..++.++++++.+.+.|+++ ++.. .+|+||+|+|
T Consensus 263 -----~~~~~~~~~~~~~~~q~~~~~~l~--~~~~~~~~~~~~~~~~r~~~~~~L~~~-g~~~-~~~~g~~~~~------ 327 (389)
T PRK08068 263 -----NLLQDHLFVSLFGAIQDAAIEALL--SDQSCVAELVARYESRRNAFISACREI-GWEV-DAPKGSFFAW------ 327 (389)
T ss_pred -----HHHHhhccCCCChHHHHHHHHHHh--CcHHHHHHHHHHHHHHHHHHHHHHHHC-CCcc-cCCCeeEEEE------
Confidence 222322222322223324444442 234789999999999999999999887 5653 6889999999
Q ss_pred cccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC--CCcEEEEeecCHHHHHHHHHHHHHH
Q 047983 161 KCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL--KDWLRITFAVEPSAFEIGLGRMKAF 225 (233)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~~Rl~~~~~~~~l~~~~~~l~~~ 225 (233)
++++. +. ++.++..++++++||.|.||+.|+. .+|+|++++.+++.+++++++|.++
T Consensus 328 ---v~~~~----~~-~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~l~~al~~l~~~ 386 (389)
T PRK08068 328 ---MPVPK----GY-TSEQFADLLLEKAHVAVAPGNGFGEHGEGYVRVGLLTDEERLREAVERIGKL 386 (389)
T ss_pred ---EECCC----CC-CHHHHHHHHHHhCCEEEecchHhCccCCCeEEEEEcCCHHHHHHHHHHHHHh
Confidence 55542 11 4667777777778999999999986 5799999998888999999998763
No 40
>PRK07683 aminotransferase A; Validated
Probab=99.96 E-value=5.8e-28 Score=211.54 Aligned_cols=199 Identities=23% Similarity=0.449 Sum_probs=151.4
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCcccccccc-CCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVF-GSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
+|+++|+++|++||+||+|.++.++++ ..++... +..+++|+++||||.|++||+|+||+++++ .+++. +
T Consensus 185 ~l~~~~~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~~~~~vi~~~s~SK~~~~pGlRiG~i~~~~--~l~~~--~---- 255 (387)
T PRK07683 185 DIADVLKDKNIFVLSDEIYSELVYEQP-HTSIAHFPEMREKTIVINGLSKSHSMTGWRIGFLFAPS--YLAKH--I---- 255 (387)
T ss_pred HHHHHHHHcCeEEEEecccccceeCCC-cCChhhccCCcCCeEEEeeccccccCccceeEEEEcCH--HHHHH--H----
Confidence 688999999999999999999988653 3355544 345789999999999999999999999987 44431 1
Q ss_pred hhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCCC
Q 047983 81 SISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSED 160 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~ 160 (233)
.....+...+.+...| .++..++.. ...+.+..++.++++++.+.+.|++. ++. +.+|+||+|+|
T Consensus 256 -----~~~~~~~~~~~~~~~q-~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~-~~~~~~~~~~~------ 320 (387)
T PRK07683 256 -----LKVHQYNVTCASSISQ-YAALEALTA-GKDDAKMMRHQYKKRRDYVYNRLISM-GLD-VEKPTGAFYLF------ 320 (387)
T ss_pred -----HHHHHhccCCCChHHH-HHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHHHc-CCc-ccCCCeeEEEE------
Confidence 1222222222222333 455555543 34678889999999999999999887 455 36899999999
Q ss_pred cccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC--CCcEEEEeecCHHHHHHHHHHHHHHHHHHhh
Q 047983 161 KCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL--KDWLRITFAVEPSAFEIGLGRMKAFYYRHAK 231 (233)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~~Rl~~~~~~~~l~~~~~~l~~~l~~~~~ 231 (233)
+.++.. +. ++.+++.++++++||.+.||+.|+. ++|+||+++.+++++++++++|.+++++.++
T Consensus 321 ---~~~~~~---~~-~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~Ri~~~~~~~~~~~al~~l~~~l~~~~~ 386 (387)
T PRK07683 321 ---PSIGHF---TM-SSFDFALDLVEEAGLAVVPGSAFSEYGEGYVRLSYAYSIETLKEGLDRLEAFLQQKAK 386 (387)
T ss_pred ---EecccC---CC-CHHHHHHHHHHhCCEEEcCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHhhcc
Confidence 544321 11 3667888889999999999999975 5899999999999999999999999987654
No 41
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.96 E-value=4.9e-28 Score=211.61 Aligned_cols=193 Identities=22% Similarity=0.371 Sum_probs=148.0
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCC-ccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGS-IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|+++|++||++||+||+|.++.+++..+.++..++. .+++|+++||||.||+||+|+||+++++ ++++. +
T Consensus 187 ~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~i~~~--~l~~~---~-- 259 (383)
T TIGR03540 187 KELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMAVGNA--DLIAG---L-- 259 (383)
T ss_pred HHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEecccccCCccceeeEEeCCH--HHHHH---H--
Confidence 47899999999999999999999987655556655543 4678999999999999999999999887 44421 1
Q ss_pred hhhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCC
Q 047983 80 HSISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSE 159 (233)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~ 159 (233)
..+......+.+...+ .+...+++. ..+++++.++.++++++.+.+.|++. ++.+ .+|+||+|+|
T Consensus 260 ------~~~~~~~~~~~~~~~q-~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~-~~~~~~~~~~----- 324 (383)
T TIGR03540 260 ------GKVKTNVDSGVFQAIQ-YAAIAALNG-PQDVVKEIRKIYQRRRDLLLEALKKI-GIDV-EKPKATFYVW----- 324 (383)
T ss_pred ------HHHHHhcccCCChHHH-HHHHHHHhC-CHHHHHHHHHHHHHHHHHHHHHHHhC-CCEe-cCCCcceEEE-----
Confidence 2222222222222333 444555543 36889999999999999999999987 5654 6888999999
Q ss_pred CcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC--CCcEEEEeecCHHHHHHHHHHHHH
Q 047983 160 DKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL--KDWLRITFAVEPSAFEIGLGRMKA 224 (233)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~~Rl~~~~~~~~l~~~~~~l~~ 224 (233)
++++. +. ++.+++.++++++||.|.||+.|+. .+|+|++++.+++.+++++++|.+
T Consensus 325 ----~~l~~----~~-~~~~~~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~ 382 (383)
T TIGR03540 325 ----VPVPE----GY-TSAEFAARLLEETGVVVTPGVGFGEYGEGYIRISLTVPDERLEEAVARIKK 382 (383)
T ss_pred ----EECCC----CC-CHHHHHHHHHHHCCEEEecchhhCccCCCeEEEEecCCHHHHHHHHHHHhh
Confidence 66542 12 4677888888889999999999975 479999999888999999999864
No 42
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.96 E-value=2.9e-28 Score=214.00 Aligned_cols=192 Identities=20% Similarity=0.322 Sum_probs=144.3
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCC-cccc-ccc---cC--CccCEEEEccCccccCCCCceEEEEEecCCCccccc
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNT-HFVP-MGV---FG--SIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQD 73 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~-~~~~-~~~---~~--~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~ 73 (233)
++|+++|++||++||+||+|.++.|++. .+.+ +.. .+ ..+++|+++||||.|++||+|+||+++++ .++++
T Consensus 189 ~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~~~~~--~l~~~ 266 (396)
T PRK09147 189 KKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRSNVPGLRSGFVAGDA--ALLKK 266 (396)
T ss_pred HHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccccEEEEeccccccCCccceeeeecCCH--HHHHH
Confidence 4789999999999999999999988763 2211 111 11 34799999999999999999999999987 44432
Q ss_pred cchhhhhhhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEE
Q 047983 74 LGVAFFHSISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFV 153 (233)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~ 153 (233)
+ .+...+...+.+...+.++++.+ ..++++++.++.++++++.+.+.|++. +. +..|+||+|+
T Consensus 267 ---~--------~~~~~~~~~~~~~~~q~a~~~~~---~~~~~~~~~~~~~~~~~~~~~~~L~~~--~~-~~~p~~g~f~ 329 (396)
T PRK09147 267 ---F--------LLYRTYHGCAMPPAVQAASIAAW---NDEAHVRENRALYREKFDAVTPILAPV--LD-VQLPDAGFYL 329 (396)
T ss_pred ---H--------HHHhhhcccCCCHHHHHHHHHHh---cchhHHHHHHHHHHHHHHHHHHHHHHh--cC-CCCCCeeEEE
Confidence 1 22222222333333443444444 235689999999999999999999874 23 3579999999
Q ss_pred EEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC--------CCcEEEEeecCHHHHHHHHHHHHHH
Q 047983 154 MYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL--------KDWLRITFAVEPSAFEIGLGRMKAF 225 (233)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--------~~~~Rl~~~~~~~~l~~~~~~l~~~ 225 (233)
| ++++. ++.+++.++++++||.+.||+.|+. .+|+||+++.+++++++++++|.++
T Consensus 330 ~---------~~~~~-------~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~~~~~~~l~~~l~rl~~~ 393 (396)
T PRK09147 330 W---------AKVPG-------DDTEFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIALVAPLAECVEAAERIVDF 393 (396)
T ss_pred E---------EECCC-------CHHHHHHHHHHhCCEEEeCCccccccccCCCCCCCeEEEEecCCHHHHHHHHHHHHHH
Confidence 9 66541 3677888888889999999999862 4799999999889999999999987
Q ss_pred HH
Q 047983 226 YY 227 (233)
Q Consensus 226 l~ 227 (233)
+.
T Consensus 394 ~~ 395 (396)
T PRK09147 394 CR 395 (396)
T ss_pred hc
Confidence 73
No 43
>PRK08363 alanine aminotransferase; Validated
Probab=99.96 E-value=5.9e-28 Score=212.18 Aligned_cols=205 Identities=25% Similarity=0.435 Sum_probs=153.5
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|+++|+++|++||+||+|.++.+++. +.++..++...++|+++||||.|++||+|+||+++.+++.+++ .+.
T Consensus 189 ~~l~~~a~~~~~~li~Deay~~~~~~~~-~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~~~~--~l~--- 262 (398)
T PRK08363 189 KEILDIAGEHDLPVISDEIYDLMTYEGK-HVSPGSLTKDVPVIVMNGLSKVYFATGWRLGYIYFVDPEGKLA--EVR--- 262 (398)
T ss_pred HHHHHHHHHcCeEEEEhhhhhhhccCCc-ccCHHHcCcCCcEEEEecchhccCCccceEEEEEEeCcHHHHH--HHH---
Confidence 3689999999999999999999988653 3345555556789999999999999999999999822113432 122
Q ss_pred hhhhHHhhhhhh--hhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecC
Q 047983 81 SISLNMRMDDYL--LLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGS 158 (233)
Q Consensus 81 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~ 158 (233)
..+.... .++.+...+ .+...++. ..++++++.++.++++++.+.+.|++++++.. ..|+||+|+|
T Consensus 263 -----~~~~~~~~~~~~~s~~~q-~~~~~~l~-~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~-~~p~g~~~~~---- 330 (398)
T PRK08363 263 -----EAIDKLARIRLCPNTPAQ-FAAIAGLT-GPMDYLEEYMKKLKERRDYIYKRLNEIPGIST-TKPQGAFYIF---- 330 (398)
T ss_pred -----HHHHHHhcccccCChHHH-HHHHHHHh-CChHHHHHHHHHHHHHHHHHHHHHhcCCCCEe-cCCCeEEEEE----
Confidence 2222111 133333333 44444443 34678999999999999999999988866653 6899999999
Q ss_pred CCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC--CCcEEEEeecCHHHHHHHHHHHHHHHHHHhh
Q 047983 159 EDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL--KDWLRITFAVEPSAFEIGLGRMKAFYYRHAK 231 (233)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~~Rl~~~~~~~~l~~~~~~l~~~l~~~~~ 231 (233)
++++... ..++.+++.++|+++||.|.||+.|+. .+|+|+|++.+++++++++++|.+++++..+
T Consensus 331 -----~~l~~~~---~~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~~~~~~~ 397 (398)
T PRK08363 331 -----PRIEEGP---WKDDKEFVLDVLHEAHVLFVHGSGFGEYGAGHFRLVFLPPVEILEEAMDRFEEFMRERLG 397 (398)
T ss_pred -----EEeccCC---CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHHhcc
Confidence 6654310 113677888888999999999999975 5799999988889999999999999887543
No 44
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=99.96 E-value=2.3e-29 Score=212.99 Aligned_cols=198 Identities=24% Similarity=0.428 Sum_probs=151.6
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccc-cCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGV-FGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~-~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|+++|++||+++|+||+|..+++++..+..+.. .++++++|.++|+||+|+++|||+||+++++ .++.. .
T Consensus 195 e~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~aslPgm~ertitvgS~gKtf~~TGWrlGW~igp~--~L~~~---~-- 267 (420)
T KOG0257|consen 195 ERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASLPGMYERTITVGSFGKTFGVTGWRLGWAIGPK--HLYSA---L-- 267 (420)
T ss_pred HHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecCCchhheEEEeccccceeeeeeeeeeeeechH--Hhhhh---H--
Confidence 57999999999999999999999999975555544 4678999999999999999999999999966 44431 1
Q ss_pred hhhhhHHhhhhhhhhccCcchHHHHHHHHhhhc-------HHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEE
Q 047983 80 HSISLNMRMDDYLLLSESVYTTVGAVPQILEKT-------EEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMF 152 (233)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~ 152 (233)
..+.+...+..+++.|. |.+..+... ...+...+.+.|+++|+.|.+.|+++ ++.. ..|+|+||
T Consensus 268 ------~~vh~~~~~~~~Tp~q~-A~a~a~~~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~~l-g~~v-~~p~gayy 338 (420)
T KOG0257|consen 268 ------FPVHQNFVFTCPTPIQE-ASAAAFALELACLQPGGSYFITELVKEYKEKRDILAKALEEL-GLKV-TGPEGAYY 338 (420)
T ss_pred ------HHHhhccccccCcHHHH-HHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHhc-CCcc-ccCCCceE
Confidence 23333333333444443 222222111 12567779999999999999999999 7774 89999999
Q ss_pred EEEecCCCcccccccccc-------cCCCCChHHHHHHHHhccCEEEECCcccCC-------CCcEEEEeecCHHHHHHH
Q 047983 153 VMYCGSEDKCLLKLNYSL-------LEGINSDTEFALKLAKEESIIVLPGITVGL-------KDWLRITFAVEPSAFEIG 218 (233)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~-------~~~~Rl~~~~~~~~l~~~ 218 (233)
+| +.++... .....++..++.+++++.|+.++|++.|+. .+++|+++....+.++.+
T Consensus 339 l~---------adfs~~~~~~~~~~~~~~~~d~~~~~wl~~~~Gv~~IP~saF~s~~~~~~~~~~~r~~~~k~~~~L~~a 409 (420)
T KOG0257|consen 339 LW---------ADFSLAKSWPFFEEILEKPDDFKFVRWLIKEGGVVVIPPSAFGSREHIKVAERLVRFCFCKADETLRKA 409 (420)
T ss_pred EE---------EeccccccCCcchhhccCCCceeeehhhhccCcEEEeCchhcCCchhhHHHHHHHHHHHHhhHHHHHHH
Confidence 99 4443111 112236888999999999999999999996 468899999999999999
Q ss_pred HHHHH
Q 047983 219 LGRMK 223 (233)
Q Consensus 219 ~~~l~ 223 (233)
.++|+
T Consensus 410 ~e~l~ 414 (420)
T KOG0257|consen 410 IERLK 414 (420)
T ss_pred HHHHh
Confidence 99987
No 45
>PRK07777 aminotransferase; Validated
Probab=99.96 E-value=7e-28 Score=210.95 Aligned_cols=197 Identities=23% Similarity=0.411 Sum_probs=149.2
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccC-CccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFG-SIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|+++|++|++++|+||+|.++.+++..+.++..+. ..+++|+++||||.|++||+|+||+++++ .+++. +
T Consensus 182 ~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~--~l~~~---~-- 254 (387)
T PRK07777 182 AAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKTFNVTGWKIGWACGPA--PLIAA---V-- 254 (387)
T ss_pred HHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEEeechhhccCcCceeEEEecCH--HHHHH---H--
Confidence 3689999999999999999999998765445555443 25789999999999999999999999987 34421 1
Q ss_pred hhhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCC
Q 047983 80 HSISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSE 159 (233)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~ 159 (233)
.....+...+.+.+.+ .+++.++.. .+.++++.++.++++++.+.+.|+++ ++.. .+|+|++|+|
T Consensus 255 ------~~~~~~~~~~~~~~~q-~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~-~~~~g~~~~~----- 319 (387)
T PRK07777 255 ------RAAKQYLTYVGGAPFQ-PAVAHALDH-EDAWVAALRDSLQAKRDRLAAGLAEA-GFEV-HDSAGTYFLC----- 319 (387)
T ss_pred ------HHHHhhcccCCCCHHH-HHHHHHHhC-CcHHHHHHHHHHHHHHHHHHHHHHhC-CCCc-cCCCcceEEE-----
Confidence 2222222333333444 444455433 35788999999999999999999887 5553 6889999999
Q ss_pred CcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC-----CCcEEEEeecCHHHHHHHHHHHHHHH
Q 047983 160 DKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL-----KDWLRITFAVEPSAFEIGLGRMKAFY 226 (233)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~-----~~~~Rl~~~~~~~~l~~~~~~l~~~l 226 (233)
++++ .. +..++.+++.++++++||.|.||+.|+. .+++||+++.+++++++++++|.++.
T Consensus 320 ----~~~~--~~-~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~~~~~~~~l~~~l~~l~~~~ 384 (387)
T PRK07777 320 ----ADPR--PL-GYDDGTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFAFCKRDDTLDEAIRRLRALR 384 (387)
T ss_pred ----eccc--cc-CCCCHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEEecCCHHHHHHHHHHHHHHh
Confidence 5543 11 1124678888888889999999999963 46899999999999999999998765
No 46
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.96 E-value=4.5e-28 Score=212.01 Aligned_cols=193 Identities=20% Similarity=0.322 Sum_probs=147.0
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCC-ccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGS-IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|+++|++||++||+||+|.++.+++..+.++..++. .+++|+++||||.|++||+|+||+++++ ++++. +
T Consensus 189 ~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~i~~~--~l~~~---~-- 261 (385)
T PRK09276 189 EEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGWRIGFAVGNA--DLIAG---L-- 261 (385)
T ss_pred HHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecchhhcCCcchhheeeeCCH--HHHHH---H--
Confidence 36899999999999999999999987655556655543 4678999999999999999999999887 44432 1
Q ss_pred hhhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCC
Q 047983 80 HSISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSE 159 (233)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~ 159 (233)
.+.+.....+.+...+ .+...++. ..+.++++.++.++++++.+.+.|+++ ++.. ..|+||+|+|
T Consensus 262 ------~~~~~~~~~~~~~~~q-~~~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~-~~~~~~~~~~----- 326 (385)
T PRK09276 262 ------GKVKSNVDSGVFQAIQ-EAGIAALN-GPQEVVEELRKIYQERRDILVEGLRKL-GLEV-EPPKATFYVW----- 326 (385)
T ss_pred ------HHHHhhccCCCCHHHH-HHHHHHHc-CcHHHHHHHHHHHHHHHHHHHHHHHhC-CCcc-cCCCcceEEE-----
Confidence 2222222222222223 44444443 346789999999999999999999987 5553 6789999999
Q ss_pred CcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC--CCcEEEEeecCHHHHHHHHHHHHH
Q 047983 160 DKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL--KDWLRITFAVEPSAFEIGLGRMKA 224 (233)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~~Rl~~~~~~~~l~~~~~~l~~ 224 (233)
++++.. . ++.+++.++++++||.+.||+.|+. .+|+|++++.+++++.+++++|.+
T Consensus 327 ----v~~~~~----~-~~~~l~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~ 384 (385)
T PRK09276 327 ----APVPKG----Y-TSAEFATLLLDKAGVVVTPGNGFGEYGEGYFRIALTVPDERIEEAVERIKK 384 (385)
T ss_pred ----EECCCC----C-CHHHHHHHHHHhCCEEECCchhhCCCCCCeEEEEeCCCHHHHHHHHHHHhh
Confidence 665421 2 4677788888889999999999975 579999999888899999999864
No 47
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.96 E-value=2.8e-28 Score=213.75 Aligned_cols=199 Identities=22% Similarity=0.484 Sum_probs=150.6
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|+++|++++++||+||+|.++.+++....++...+. +++++++|+||.|++||+|+||+++++ +++++ +
T Consensus 189 ~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~~i~~~s~SK~~~~~GlRiG~~~~~~--~~~~~--~---- 259 (391)
T PRK08361 189 KAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYAP-DNTILANSFSKTFAMTGWRLGFVIAPE--QVIKD--M---- 259 (391)
T ss_pred HHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcCC-CCEEEEecCchhcCCcHhhhhhhccCH--HHHHH--H----
Confidence 36889999999999999999999887644445544433 689999999999999999999999987 34421 1
Q ss_pred hhhhHHhhhhhhhhccCcchHHHHHHHHhhhc-HHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCC
Q 047983 81 SISLNMRMDDYLLLSESVYTTVGAVPQILEKT-EEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSE 159 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~ 159 (233)
.........+.+...+ .++..++++. ..+++++.++.++++++.+.+.|++++++.. ..|+||+|+|
T Consensus 260 -----~~~~~~~~~~~~~~~q-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~-~~p~g~~~~~----- 327 (391)
T PRK08361 260 -----IKLHAYIIGNVASFVQ-IAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKEMPHIKV-FEPKGAFYVF----- 327 (391)
T ss_pred -----HHHHhhhccCCChHHH-HHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHhCCCCee-cCCCEEEEEE-----
Confidence 1222222223322223 4444555443 3468999999999999999999998867664 7899999999
Q ss_pred CcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC--CCcEEEEeecCHHHHHHHHHHHHHHHHH
Q 047983 160 DKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL--KDWLRITFAVEPSAFEIGLGRMKAFYYR 228 (233)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~~Rl~~~~~~~~l~~~~~~l~~~l~~ 228 (233)
++++.. +. ++.+++.++++++||.|.||+.|+. .+|+|++++.+++++++++++|.+++++
T Consensus 328 ----~~l~~~---~~-~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~al~~l~~~l~~ 390 (391)
T PRK08361 328 ----ANIDET---GM-SSEDFAEWLLEKARVVVIPGTAFGKAGEGYIRISYATSKEKLIEAMERMEKALEE 390 (391)
T ss_pred ----EECCCC---CC-CHHHHHHHHHHhCCEEEcCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHHhc
Confidence 666421 12 4667777777789999999999975 5899999999888999999999998864
No 48
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.96 E-value=8.1e-28 Score=209.93 Aligned_cols=197 Identities=25% Similarity=0.489 Sum_probs=148.8
Q ss_pred ChHHHHHHHcCcEEEEccccCccccC-CCcccccccc-CCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFG-NTHFVPMGVF-GSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAF 78 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~-~~~~~~~~~~-~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~ 78 (233)
++|+++|+++|++||+||+|.++.++ +....++..+ +..+++++++||||.|+++|+|+||+++++ ++++. +
T Consensus 181 ~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~~--~~~~~---~- 254 (382)
T PRK06108 181 RAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWLVAPP--ALGQV---L- 254 (382)
T ss_pred HHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCcccceeeeeCCH--HHHHH---H-
Confidence 36899999999999999999999987 3333333333 335789999999999999999999999987 44431 1
Q ss_pred hhhhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecC
Q 047983 79 FHSISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGS 158 (233)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~ 158 (233)
.....+...+.+...+ .+...++.. ..+++++.++.++++++.+.+.|++++++.. ..|+||+|+|
T Consensus 255 -------~~~~~~~~~~~~~~~q-~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~p~~g~~~~---- 320 (382)
T PRK06108 255 -------EKLIEYNTSCVAQFVQ-RAAVAALDE-GEDFVAELVARLRRSRDHLVDALRALPGVEV-AKPDGAMYAF---- 320 (382)
T ss_pred -------HHHHHhcccCCChHHH-HHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHHhCCCCcc-cCCCeeEEEE----
Confidence 2222222222222333 444444433 3568889999999999999999988767764 6889999999
Q ss_pred CCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC--CCcEEEEeecCHHHHHHHHHHHHHHHH
Q 047983 159 EDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL--KDWLRITFAVEPSAFEIGLGRMKAFYY 227 (233)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~~Rl~~~~~~~~l~~~~~~l~~~l~ 227 (233)
++++.. .++.+++.++++++||.+.||+.|+. .+|+|+|++.+++++++++++|.++++
T Consensus 321 -----~~l~~~-----~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~~l~ 381 (382)
T PRK06108 321 -----FRIPGV-----TDSLALAKRLVDEAGLGLAPGTAFGPGGEGFLRWCFARDPARLDEAVERLRRFLA 381 (382)
T ss_pred -----EeCCCC-----CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHHh
Confidence 655421 14667888888889999999999975 589999999999999999999998875
No 49
>PRK07337 aminotransferase; Validated
Probab=99.96 E-value=1.1e-27 Score=209.74 Aligned_cols=199 Identities=21% Similarity=0.402 Sum_probs=146.1
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|+++|+++++++|+||+|.++.+++. +.++. ...+++|+++|+||.|++||+|+||+++++ .+++. +
T Consensus 186 ~~i~~~a~~~~~~ii~De~y~~~~~~~~-~~~~~--~~~~~vi~~~S~SK~~~~~G~RiG~~~~~~--~l~~~---l--- 254 (388)
T PRK07337 186 RRIVEAVRARGGFTIVDEIYQGLSYDAA-PVSAL--SLGDDVITINSFSKYFNMTGWRLGWLVVPE--ALVGT---F--- 254 (388)
T ss_pred HHHHHHHHHCCCEEEEeccccccccCCC-CcChh--hccCCEEEEEechhhcCCchhheeeeecCH--HHHHH---H---
Confidence 3688999999999999999999988654 22332 234679999999999999999999999987 34421 1
Q ss_pred hhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCCC
Q 047983 81 SISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSED 160 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~ 160 (233)
.........+.+...| .++..++.....++.++.++.++++++.+.+.|+++ ++..+..|+||+|+|
T Consensus 255 -----~~~~~~~~~~~s~~~q-~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~-~~~~~~~p~~g~f~~------ 321 (388)
T PRK07337 255 -----EKLAQNLFICASALAQ-HAALACFEPDTLAIYERRRAEFKRRRDFIVPALESL-GFKVPVMPDGAFYVY------ 321 (388)
T ss_pred -----HHHHHHhccCCChHHH-HHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHhc-CCccccCCCeeEEEE------
Confidence 2222222333344444 444444543434556888999999999999999886 443224789999999
Q ss_pred cccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC---CCcEEEEeecCHHHHHHHHHHHHHHH
Q 047983 161 KCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL---KDWLRITFAVEPSAFEIGLGRMKAFY 226 (233)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~---~~~~Rl~~~~~~~~l~~~~~~l~~~l 226 (233)
++++....++..++.+++.++++++||.|.||+.|+. .+|+|+|++.+++.+++++++|.+++
T Consensus 322 ---~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~Ri~~~~~~~~l~~~l~rl~~~l 387 (388)
T PRK07337 322 ---ADCRGVAHPAAGDSAALTQAMLHDAGVVLVPGRDFGPHAPRDYIRLSYATSMSRLEEAVARLGKLF 387 (388)
T ss_pred ---EecccccCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCCEEEEEecCCHHHHHHHHHHHHHHh
Confidence 5553210011124677888889999999999999975 58999999998999999999998765
No 50
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.96 E-value=2.3e-27 Score=207.97 Aligned_cols=204 Identities=25% Similarity=0.470 Sum_probs=153.0
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCcccccccc--CCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVF--GSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAF 78 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~--~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~ 78 (233)
++|+++|++||+++|+||+|.++.+++..+.++.++ +..+++++++||||.|++||+|+||+++++ +++++ +
T Consensus 187 ~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~i~~~~--~~~~~---~- 260 (393)
T PRK05764 187 EAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFSKAYAMTGWRLGYAAGPK--ELIKA---M- 260 (393)
T ss_pred HHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCCEEEEecCcccccCccceeEEEecCH--HHHHH---H-
Confidence 368999999999999999999999876544455544 335689999999999999999999999876 34421 1
Q ss_pred hhhhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecC
Q 047983 79 FHSISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGS 158 (233)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~ 158 (233)
.+.......+.++..+ .+...+++ ...+++++.++.++++++.+.+.|++++++.. ..|+||+|+|
T Consensus 261 -------~~~~~~~~~~~~~~~q-~~~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~-~~~~g~~~~~---- 326 (393)
T PRK05764 261 -------SKLQSHSTSNPTSIAQ-YAAVAALN-GPQDEVEEMRQAFEERRDLMVDGLNEIPGLEC-PKPEGAFYVF---- 326 (393)
T ss_pred -------HHHHhhcccCCChHHH-HHHHHHHc-CChHHHHHHHHHHHHHHHHHHHHHhhCCCCcc-cCCCcceEEE----
Confidence 2222212223333333 44455554 24578889999999999999999998867664 6799999999
Q ss_pred CCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeecCHHHHHHHHHHHHHHHHHH
Q 047983 159 EDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAVEPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~~~~~l~~~~~~l~~~l~~~ 229 (233)
++++........++.++...+++++||.+.||+.|+..+|+|++++.+++++++++++|.++++++
T Consensus 327 -----~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~vRis~~~~~~~~~~~i~~l~~~~~~~ 392 (393)
T PRK05764 327 -----PNVSKLLGKSITDSLEFAEALLEEAGVAVVPGIAFGAPGYVRLSYATSLEDLEEGLERIERFLESL 392 (393)
T ss_pred -----EecccccccccCCHHHHHHHHHHhCCEEEccccccCCCCEEEEEecCCHHHHHHHHHHHHHHHHhh
Confidence 554421100001246777788888999999999998889999999999999999999999998765
No 51
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.96 E-value=6.7e-28 Score=216.25 Aligned_cols=211 Identities=18% Similarity=0.255 Sum_probs=150.2
Q ss_pred ChHHHHHHH--cCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchh-
Q 047983 1 FCIEETTKK--LGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVA- 77 (233)
Q Consensus 1 ~~i~~l~~~--~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~- 77 (233)
++|+++|++ +|++||+||+|.+|.+ .+.++.... .+++|++.||||.|++||||+||+++++. .++++ ++
T Consensus 264 ~~I~~ia~~~~~~l~II~DEvY~~f~~---~~~s~~~~~-~~~~I~v~SfSK~f~mtG~RlG~i~~~~~-~v~~~--~i~ 336 (527)
T PRK09275 264 EKIADIVNEKRPDLMIITDDVYGTFVD---DFRSLFAVL-PYNTILVYSFSKYFGATGWRLGVIALHED-NVFDK--LIA 336 (527)
T ss_pred HHHHHHHHhcCCCcEEEECCCChhhcc---cccCHHHhC-CCCEEEEeehhhhccCcHhHHhhhhcCch-hHHHH--HHH
Confidence 368899965 5999999999999874 233443332 37899999999999999999999999873 22221 11
Q ss_pred ------------hhhhh--------------hhHHhhhhhhhhccCcchHHH-H---HHHHhhhcHHHHHHHHHHHHHHH
Q 047983 78 ------------FFHSI--------------SLNMRMDDYLLLSESVYTTVG-A---VPQILEKTEEEFFSKITDILREA 127 (233)
Q Consensus 78 ------------~~~~~--------------~~~~~~~~~~~~~~~~~~~~~-~---~~~~l~~~~~~~~~~~~~~~~~~ 127 (233)
+++++ .....+..+.+.+.+.+.|.+ + +.+++ +..+++.+++++.+++|
T Consensus 337 ~l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~~~t~~~s~p~Q~a~al~~~~all-~~~~~~~~~~~~~~~~R 415 (527)
T PRK09275 337 KLPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALL-DEEDAYKKAMKDIIRRR 415 (527)
T ss_pred hccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHH-hCchHHHHHHHHHHHHH
Confidence 00000 001233344445555566642 3 33434 34467899999999999
Q ss_pred HHHHHHHhhcCCCcccccCCCccEEEEEecCCCcccccccccc---c--------CCCCChHHHHHHHHhccCEEEECCc
Q 047983 128 ADICCDRLKEIPCITCPKKPEGSMFVMYCGSEDKCLLKLNYSL---L--------EGINSDTEFALKLAKEESIIVLPGI 196 (233)
Q Consensus 128 ~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~---~--------~~~~~~~~~~~~ll~~~gi~v~pg~ 196 (233)
++.+.+.|. + .+. ..+|+|+||+| +.++.-. . ....++.+++.++++++||++.||+
T Consensus 416 r~~l~~~Lg-~-~~~-~~~p~g~fY~~---------~di~~~~~~~~g~~f~~~l~~~~~~~~f~~~Ll~e~gV~v~PG~ 483 (527)
T PRK09275 416 YKALYEGLG-L-PEP-EDPNNAAYYTL---------IDLEEWAEKNYGKEFADYLKKNYSPVDLLFRLAEETGVVLLPGG 483 (527)
T ss_pred HHHHHHHcC-C-CCc-CCCCCeeEEEE---------EEhHHhhhhccCchhhhhhhccCCHHHHHHHHHhcCCEEEeCch
Confidence 999999883 2 222 14799999999 4432100 0 0112578999999999999999999
Q ss_pred ccCC-CCcEEEEeec-CHHHHHHHHHHHHHHHHHHhh
Q 047983 197 TVGL-KDWLRITFAV-EPSAFEIGLGRMKAFYYRHAK 231 (233)
Q Consensus 197 ~f~~-~~~~Rl~~~~-~~~~l~~~~~~l~~~l~~~~~ 231 (233)
.|+. ++++|+|++. +++++.++++||.+++.++..
T Consensus 484 ~Fg~~~~~vRis~a~~~~~~~~~~~~rl~~~l~~y~~ 520 (527)
T PRK09275 484 GFGGPEWSVRVSLANLNEEDYAKIGKAIRKLLDEYYE 520 (527)
T ss_pred hhCCCCCeEEEEEecCCHHHHHHHHHHHHHHHHHHHH
Confidence 9986 6789999996 889999999999999998864
No 52
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.96 E-value=1.1e-27 Score=210.29 Aligned_cols=194 Identities=20% Similarity=0.328 Sum_probs=148.3
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCC-ccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGS-IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
+|+++|++||++||+||+|.++.+++..+.++..+.. .+++|+++||||.|++||+|+||+++++ ++++. +
T Consensus 194 ~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~i~~~~--~l~~~---l--- 265 (394)
T PRK05942 194 EIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVVGNR--HIIQG---L--- 265 (394)
T ss_pred HHHHHHHHcCeEEEEeccchhhccCCCCCCChhhCCCccccEEEEecchhccCChhhheeeeecCH--HHHHH---H---
Confidence 6889999999999999999999987655555555543 4568999999999999999999999987 44421 1
Q ss_pred hhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCCC
Q 047983 81 SISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSED 160 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~ 160 (233)
.........+.+..+| .++..+++ ..++++++.++.++++++.+.+.|++. ++.. ..|+||+|+|
T Consensus 266 -----~~~~~~~~~~~~~~~q-~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~-~~~~~~~f~~------ 330 (394)
T PRK05942 266 -----RTLKTNLDYGIFSALQ-KAAETALQ-LPDSYLQQVQERYRTRRDFLIQGLGEL-GWNI-PPTKATMYLW------ 330 (394)
T ss_pred -----HHHHhhcccCCCHHHH-HHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHHHC-CCee-cCCCeeeEEE------
Confidence 2222222233333333 45555553 346788999999999999999999887 5553 6789999999
Q ss_pred cccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC--CCcEEEEeecCHHHHHHHHHHHHHHH
Q 047983 161 KCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL--KDWLRITFAVEPSAFEIGLGRMKAFY 226 (233)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~~Rl~~~~~~~~l~~~~~~l~~~l 226 (233)
++++.. . ++.+++.++++++||.|.||+.|+. .+|+|+|++.+.+.+.+++++|.++-
T Consensus 331 ---~~~~~~----~-~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~~ 390 (394)
T PRK05942 331 ---VPCPVG----M-GSTDFALNVLQKTGVVVTPGNAFGEGGEGYVRISLIADCDRLGEALDRLKQAG 390 (394)
T ss_pred ---EECCCC----C-CHHHHHHHHHHHCCEEEeCChhhCcCCCCeEEEEecCCHHHHHHHHHHHHHhh
Confidence 665421 2 4677788889899999999999974 58999999988899999999998754
No 53
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.96 E-value=1.7e-27 Score=209.50 Aligned_cols=198 Identities=16% Similarity=0.105 Sum_probs=145.0
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCC-ccCEEEEccCccccCCCCceEEEEEecCCCcccccc--chh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGS-IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDL--GVA 77 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~--~~~ 77 (233)
++|+++|++||++||+||+|.+|.+++..+.++..++. .+++|+++||||.|++||+|+||+++++ .++... ...
T Consensus 196 ~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~pGlRiG~~i~~~--~l~~~~~~~~~ 273 (402)
T TIGR03542 196 KELVDYANEHGSLILFDAAYSAFISDPSLPHSIFEIPGAKECAIEFRSFSKTAGFTGVRLGWTVVPK--ELTYADGHSVI 273 (402)
T ss_pred HHHHHHHHHcCeEEEEEchhhhhccCCCCCcchhhCCCCcccEEEEecCccccCCCCcceEEEEecH--HHhhcchhhHH
Confidence 47899999999999999999999876544445554443 4689999999999999999999999987 333100 000
Q ss_pred hhhhhhhHHhh---hhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEE
Q 047983 78 FFHSISLNMRM---DDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVM 154 (233)
Q Consensus 78 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~ 154 (233)
... ......+++...| .+...++.+....+..+.++.++++++.+.+.|++. ++.. ..|.||+|+|
T Consensus 274 --------~~~~~~~~~~~~~~s~~~q-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~-~~~~~~~f~~ 342 (402)
T TIGR03542 274 --------QDWERRQCTKFNGASYPVQ-RAAEAAYAGEGLQPILEAISYYMENARILRKALEAA-GFKV-YGGEHAPYLW 342 (402)
T ss_pred --------HHHHHHhhhcccCCCHHHH-HHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHhc-Ccee-cCCCceeEEE
Confidence 111 1111112333333 444555544444567778899999999999999886 4543 5778999999
Q ss_pred EecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC--CCcEEEEeecCHHHHHHHHHHHHHH
Q 047983 155 YCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL--KDWLRITFAVEPSAFEIGLGRMKAF 225 (233)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~~Rl~~~~~~~~l~~~~~~l~~~ 225 (233)
++++.. + ++.++..++++++||.+.||+.|+. .+|+||+++.+++++++++++|.+.
T Consensus 343 ---------v~l~~~----~-~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~ 401 (402)
T TIGR03542 343 ---------VKTPEG----I-SSWDFFDFLLYQYHVVGTPGSGFGPSGEGFVRFSAFGKRENIVEACERIKEA 401 (402)
T ss_pred ---------EECCCC----C-CHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHhh
Confidence 666421 2 4667888888888999999999975 5899999877899999999999865
No 54
>PRK05839 hypothetical protein; Provisional
Probab=99.95 E-value=2.5e-27 Score=206.68 Aligned_cols=186 Identities=25% Similarity=0.343 Sum_probs=137.4
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCcccccccc------CCccCEEEEccCccccCCCCceEEEEEecCCCcccccc
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVF------GSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDL 74 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~------~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~ 74 (233)
++|+++|++||++||+||+|.++.+++ ...++... ...+++|+++||||.|++||+|+||+++++ +++++
T Consensus 178 ~~i~~~~~~~~~~ii~DE~Y~~~~~~~-~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~ii~~~--~~~~~- 253 (374)
T PRK05839 178 IEWVKLALKHDFILINDECYSEIYENT-PPPSLLEASILVGNESFKNVLVINSISKRSSAPGLRSGFIAGDA--SILKK- 253 (374)
T ss_pred HHHHHHHHHcCCEEEeccchhhcccCC-CCCCHhhhhcccCccccCcEEEEeccccccCCccceeEEEecCH--HHHHH-
Confidence 478999999999999999999986543 23333221 234799999999999999999999999976 34421
Q ss_pred chhhhhhhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEE
Q 047983 75 GVAFFHSISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVM 154 (233)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~ 154 (233)
+ .........+.+...|..+.+.+ . .++++++.++.++++++.+.+.| +. ..|+||+|+|
T Consensus 254 --~--------~~~~~~~~~~~~~~~q~~~~~~l-~--~~~~~~~~~~~~~~~~~~~~~~l----~~---~~p~gg~fi~ 313 (374)
T PRK05839 254 --Y--------KAYRTYLGCASPLPLQKAAAVAW-L--DDEHAEFFRNIYAKNLKLAREIL----GI---TIPPATFYVW 313 (374)
T ss_pred --H--------HHHHhhcCCCCChHHHHHHHHHh-c--cchHHHHHHHHHHHHHHHHHHhc----CC---CCCCeeEEEE
Confidence 1 22222222333333443333333 2 35688889999999999888766 22 2688999999
Q ss_pred EecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC----CCcEEEEeecCHHHHHHHHHHHHHHHH
Q 047983 155 YCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL----KDWLRITFAVEPSAFEIGLGRMKAFYY 227 (233)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~----~~~~Rl~~~~~~~~l~~~~~~l~~~l~ 227 (233)
++++ ++.+++.++++++||.|.||+.|+. .+|+|+|++.+++++++++++|.++++
T Consensus 314 ---------~~~~--------~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~~~iRis~~~~~~~~~~~l~~l~~~l~ 373 (374)
T PRK05839 314 ---------LPVD--------NDEEFTKKLYQNEGIKVLPGSFLGRNGIGKGYVRIALVYDTPKLEKALEIIKTYLE 373 (374)
T ss_pred ---------EeCC--------ChHHHHHHHHHHCCEEEeCchhhCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHhh
Confidence 5553 2677888877779999999998874 489999999889999999999998874
No 55
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.95 E-value=2.5e-27 Score=207.91 Aligned_cols=190 Identities=22% Similarity=0.348 Sum_probs=141.7
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCC-ccccc-cc---c--CCccCEEEEccCccccCCCCceEEEEEecCCCccccc
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNT-HFVPM-GV---F--GSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQD 73 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~-~~~~~-~~---~--~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~ 73 (233)
++|+++|++||++||+||+|.++.+++. .+.++ .. . +..+++|+++||||.|++||+|+||+++++ +++++
T Consensus 188 ~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~~~GlRvG~~i~~~--~l~~~ 265 (393)
T TIGR03538 188 KKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSNLPGLRSGFVAGDA--EILKA 265 (393)
T ss_pred HHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecchhhcCCcccceEEEecCH--HHHHH
Confidence 4789999999999999999999988642 22222 11 2 235789999999999999999999999987 44432
Q ss_pred cchhhhhhhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEE
Q 047983 74 LGVAFFHSISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFV 153 (233)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~ 153 (233)
+ .++......+.+...+..+++.+ ..++++++.++.++++++.+.+.|++. +. +..|+||+|+
T Consensus 266 ---~--------~~~~~~~~~~~~~~~q~~~~~~l---~~~~~~~~~~~~~~~~~~~~~~~L~~~--~~-~~~p~gg~f~ 328 (393)
T TIGR03538 266 ---F--------LRYRTYHGCAMPIPTQLASIAAW---NDEQHVRENRALYREKFAAVLEILGQV--LD-LELPDAGFYL 328 (393)
T ss_pred ---H--------HHHHHhhccCcCHHHHHHHHHHh---cChHHHHHHHHHHHHHHHHHHHHHHhh--Cc-ccCCCeeEEE
Confidence 1 22232222333333443434443 235789999999999999999999874 22 3579999999
Q ss_pred EEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC--------CCcEEEEeecCHHHHHHHHHHHHHH
Q 047983 154 MYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL--------KDWLRITFAVEPSAFEIGLGRMKAF 225 (233)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--------~~~~Rl~~~~~~~~l~~~~~~l~~~ 225 (233)
| ++++ . ++.+++.++++++||.|.||+.|+. .+|+||+++.+++++++++++|.++
T Consensus 329 ~---------~~~~--~-----~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~ 392 (393)
T TIGR03538 329 W---------PKVP--G-----DDEAFARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIALVAPLEECVEAAERIRSF 392 (393)
T ss_pred E---------EECC--C-----CHHHHHHHHHHHCCEEEeCCccccccccCCCCCCCEEEEEecCCHHHHHHHHHHHHHh
Confidence 9 6654 1 3677777878889999999999851 4799999998899999999999875
No 56
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=99.95 E-value=3.5e-27 Score=200.02 Aligned_cols=206 Identities=19% Similarity=0.280 Sum_probs=159.1
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCC--------Ccc-----------ccccccCCccCEEEEccCccccCCCCceEEE
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGN--------THF-----------VPMGVFGSIVPVLTLGSISKRWIVPGWRLGW 61 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~--------~~~-----------~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~ 61 (233)
++|.++|++||++||+||.|.-+.++. .+. .++..++.+.|||.++||||. .+||+|+||
T Consensus 227 k~iy~LArKyDfLIVeDdpYy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKi-iaPGlRlG~ 305 (472)
T KOG0634|consen 227 KKIYQLARKYDFLIVEDDPYYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKI-IAPGLRLGW 305 (472)
T ss_pred HHHHHHHHHcCEEEEecCccceeeccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhh-hcCcceeEE
Confidence 378999999999999999999999872 111 133445678899999999999 889999999
Q ss_pred EEecCCCccccccchhhhhhhhhHHhhhhhhh---hccCcchHH---HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHh
Q 047983 62 LVTSDPNGILQDLGVAFFHSISLNMRMDDYLL---LSESVYTTV---GAVPQILEKTEEEFFSKITDILREAADICCDRL 135 (233)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L 135 (233)
+++++ .++ .++..... .+.+..+|. +.+..+.+.+..+|+.+++..|..|++.+..+|
T Consensus 306 it~~~--~~l--------------~ril~~ae~~t~~pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al 369 (472)
T KOG0634|consen 306 ITGNS--LFL--------------KRILDLAEVATSGPSGFSQGIVYAMLKRWGQEGFLRWIQHLRSSYTERRNALLSAL 369 (472)
T ss_pred eecCH--HHH--------------HHHhhhcceeecCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998 344 33333333 233344442 334444333455899999999999999999999
Q ss_pred hc-CCCc-ccccCCCccEEEEEecCCCccccccccccc---CCCCChHHHHHHHHhccCEEEECCcccCC------CC-c
Q 047983 136 KE-IPCI-TCPKKPEGSMFVMYCGSEDKCLLKLNYSLL---EGINSDTEFALKLAKEESIIVLPGITVGL------KD-W 203 (233)
Q Consensus 136 ~~-~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ll~~~gi~v~pg~~f~~------~~-~ 203 (233)
.+ +|.. ..+.+|.||||+| +++|.... ..+.+-++.....+.++||.+++|+.|.. +. |
T Consensus 370 ~kylp~~~~~~~~P~aGmFiw---------v~i~~~~~~~~~~i~q~~e~i~~~~vk~gV~~v~G~~F~v~p~~s~~kif 440 (472)
T KOG0634|consen 370 DKYLPKSVCEYHPPKAGMFIW---------VEIPYINFDTKKSINQIEEIIFIKAVKNGVKLVCGSWFMVDPESSWSKIF 440 (472)
T ss_pred HHhCCCCeeEEecCCcceEEE---------EEecccccccccchHHHHHHHHHHHHHCCeEEecCceeEEcCccCCCcce
Confidence 88 7655 5578999999999 88874332 13323567888899999999999999963 23 9
Q ss_pred EEEEeec-CHHHHHHHHHHHHHHHHHHhhc
Q 047983 204 LRITFAV-EPSAFEIGLGRMKAFYYRHAKK 232 (233)
Q Consensus 204 ~Rl~~~~-~~~~l~~~~~~l~~~l~~~~~~ 232 (233)
+|++++. +.++++++++|+..+++++...
T Consensus 441 fRls~a~a~~e~l~~g~~rf~~~ike~f~~ 470 (472)
T KOG0634|consen 441 FRLSIAFAEPEKLDEGIERFGSVIKEHFIT 470 (472)
T ss_pred EEEEeecCCHHHHHHHHHHHHHHHHHHhhc
Confidence 9999997 8999999999999999998654
No 57
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.95 E-value=2.9e-27 Score=211.92 Aligned_cols=209 Identities=18% Similarity=0.226 Sum_probs=150.5
Q ss_pred ChHHHHHHHc--CcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchh-
Q 047983 1 FCIEETTKKL--GIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVA- 77 (233)
Q Consensus 1 ~~i~~l~~~~--~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~- 77 (233)
++|+++|++| |++||+||+|.+|.+ .+.++.+.. .+++|++.||||.|++||||+||+++++. .++++ ++
T Consensus 263 ~~I~~ia~~~~~~l~II~DEvY~~f~~---~~~sl~~~~-~~~vI~v~SfSK~fg~~G~RlG~i~~~~~-~v~d~--li~ 335 (521)
T TIGR03801 263 EKIVDIVANDRPDLMILTDDVYGTFVD---DFRSLFAEL-PYNTIGVYSFSKYFGATGWRLGTIALHKD-NIFDK--LIA 335 (521)
T ss_pred HHHHHHHHhcCCCeEEEECCCchhhcc---cccchhhhC-CCCEEEEEcchhhccCchhhhhhhhcCch-HHHHH--HHH
Confidence 3688999987 999999999999875 233444332 36899999999999999999999999873 23221 11
Q ss_pred ------------hhhhh--------------hhHHhhhhhhhhccCcchHH-H---HHHHHhhhcHHHHHHHHHHHHHHH
Q 047983 78 ------------FFHSI--------------SLNMRMDDYLLLSESVYTTV-G---AVPQILEKTEEEFFSKITDILREA 127 (233)
Q Consensus 78 ------------~~~~~--------------~~~~~~~~~~~~~~~~~~~~-~---~~~~~l~~~~~~~~~~~~~~~~~~ 127 (233)
+++++ .....+..+.+.+.+.+.|. . ++.+++ +..+.+.+++++.+++|
T Consensus 336 ~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~~~g~s~p~Q~q~al~a~~all-~~~~~y~~~~~~~~~~R 414 (521)
T TIGR03801 336 ELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALM-DKENAYKAETKDICRRR 414 (521)
T ss_pred hccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHh-ccchhHHHHHHHHHHHH
Confidence 00000 00022333334455566664 2 344444 34467999999999999
Q ss_pred HHHHHHHhhcCCCcccccCCCccEEEEEecCCCcccccccccccC-------------CCCChHHHHHHHHhccCEEEEC
Q 047983 128 ADICCDRLKEIPCITCPKKPEGSMFVMYCGSEDKCLLKLNYSLLE-------------GINSDTEFALKLAKEESIIVLP 194 (233)
Q Consensus 128 ~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~ll~~~gi~v~p 194 (233)
++.+.+.| .+ ... ..+|+|+||+| +.++ ... ...++.+++.++++++||++.|
T Consensus 415 ~~~l~~~L-g~-~~~-~~~~~g~~Y~~---------~di~--~~~~~~~~~~f~~~l~~~~~~~~~~~~L~~e~gV~v~P 480 (521)
T TIGR03801 415 EKLLFRGL-GL-PLQ-EDPNDVAYYTL---------IDLE--EWAEKNYGEEFSSYLKKNYSPVDVLFRLAEETGIVLLP 480 (521)
T ss_pred HHHHHHhc-CC-CCc-CCCCCeEEEEE---------eehH--HHHHHhcchHHHHHHhccCCHHHHHHHHHHhCCEEEeC
Confidence 99999998 22 222 25789999999 4443 210 0114789999999999999999
Q ss_pred CcccCC-CCcEEEEeec-CHHHHHHHHHHHHHHHHHHhh
Q 047983 195 GITVGL-KDWLRITFAV-EPSAFEIGLGRMKAFYYRHAK 231 (233)
Q Consensus 195 g~~f~~-~~~~Rl~~~~-~~~~l~~~~~~l~~~l~~~~~ 231 (233)
|+.|+. ++++|+|++. ++++++++.+||++++.+|..
T Consensus 481 G~~Fg~~~~~vRisla~l~~~~~~~~~~rl~~~~~~~~~ 519 (521)
T TIGR03801 481 GGGFGGPEWSVRVSLANLNEYDYAEIGRAIRKILDEYYE 519 (521)
T ss_pred chhcCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHH
Confidence 999986 5689999995 899999999999999998865
No 58
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.95 E-value=5.2e-27 Score=208.26 Aligned_cols=189 Identities=14% Similarity=0.113 Sum_probs=141.1
Q ss_pred hHHHHHHHc-CcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 2 CIEETTKKL-GIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 2 ~i~~l~~~~-~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
+|+++|++| +++||+||+|.+|.+++. +..+. . ..+++|+++||||.|+ ||+|+||+++++ .+++. +
T Consensus 236 ~l~~la~~~~~~~ii~De~Y~~~~~~~~-~~~~~-~-~~~~vi~~~SfSK~~~-~GlRiG~~i~~~--~~~~~---~--- 303 (431)
T PRK15481 236 ALRNLLARYPQVLVIIDDHFALLSSSPY-HSVIP-Q-TTQRWALIRSVSKALG-PDLRLAFVASDS--ATSAR---L--- 303 (431)
T ss_pred HHHHHHHhcCCceEEecCchhhhccCCC-CCCCc-C-CCCCEEEEeeeccccC-CCceeEEEeCCH--HHHHH---H---
Confidence 789999999 999999999999986542 22222 2 3468999999999999 999999999987 34421 1
Q ss_pred hhhhHHhhhhhhhhccCcchHHHHHHHHhhhc-HHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCC
Q 047983 81 SISLNMRMDDYLLLSESVYTTVGAVPQILEKT-EEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSE 159 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~ 159 (233)
.........+.+...| .+++.+++++ .++++++.++.++++++.+.+.|++. ++. +..|+||+|+|
T Consensus 304 -----~~~~~~~~~~~s~~~q-~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~~-~~~-~~~p~gg~f~~----- 370 (431)
T PRK15481 304 -----RLRLNSGTQWVSHLLQ-DLVYACLTDPEYQARLAQARLFYAQRRQKLARALQQY-GIA-IPSPGDGLNLW----- 370 (431)
T ss_pred -----HHHHhccccCCCHHHH-HHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHc-CCc-cccCCCeEEEE-----
Confidence 1111221222333333 6666666554 45789999999999999999999887 554 35799999999
Q ss_pred CcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC---CCcEEEEeec-CHHHHHHHHHHHHHHHH
Q 047983 160 DKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL---KDWLRITFAV-EPSAFEIGLGRMKAFYY 227 (233)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~---~~~~Rl~~~~-~~~~l~~~~~~l~~~l~ 227 (233)
++++. ++.+++.. |.++||.|.||+.|+. .+|+|+|++. +++++++++++|.+++.
T Consensus 371 ----~~l~~-------~~~~~~~~-l~~~gV~v~pg~~f~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~~~ 430 (431)
T PRK15481 371 ----LPLDT-------DSQATALT-LAKSGWLVREGEAFGVSAPSHGLRITLSTLNDAEINRLAADLHQALN 430 (431)
T ss_pred ----EECCC-------CHHHHHHH-HHHCCcEEecCCccccCCCCCeEEEEcCCCChHHHHHHHHHHHHHhc
Confidence 55541 24555555 5578999999999964 3689999997 78999999999998764
No 59
>PRK07550 hypothetical protein; Provisional
Probab=99.95 E-value=1.9e-26 Score=201.84 Aligned_cols=195 Identities=22% Similarity=0.278 Sum_probs=145.6
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCcccccccc-CCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVF-GSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|+++|++||++||+||+|.+|.+++..+.++... +..+++|++.||||.|++||+|+||+++++ .++++ +
T Consensus 186 ~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~i~~~~--~~~~~---~-- 258 (386)
T PRK07550 186 HELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTGHRVGAVVASP--ARIAE---I-- 258 (386)
T ss_pred HHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchhhccCcccceEeeecCH--HHHHH---H--
Confidence 478999999999999999999987654333333322 345789999999999999999999999987 34321 1
Q ss_pred hhhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCC
Q 047983 80 HSISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSE 159 (233)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~ 159 (233)
.........+.+...+ .+++.+++ ..+++.++.++.++++++.+.+.|+.++++. ..|.||+|+|
T Consensus 259 ------~~~~~~~~~~~s~~~q-~~~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~--~~~~g~~~~~----- 323 (386)
T PRK07550 259 ------EKFMDTVAICAPRIGQ-IAVAWGLP-NLADWRAGNRAEIARRRDAFRAVFARLPGWE--LLASGAYFAY----- 323 (386)
T ss_pred ------HHHHhhcccCCCcHHH-HHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHHhCCCce--eCCCceEEEE-----
Confidence 2222222233333333 55555554 3567889999999999999999998865553 3577999999
Q ss_pred CcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC--CCcEEEEeec-CHHHHHHHHHHHHHH
Q 047983 160 DKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL--KDWLRITFAV-EPSAFEIGLGRMKAF 225 (233)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~~Rl~~~~-~~~~l~~~~~~l~~~ 225 (233)
++++.. +. ++.+++.++++++||.|.||+.|+. ++|+|++++. +++++++++++|.++
T Consensus 324 ----~~~~~~---~~-~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~~~~~~~~l~~~ 384 (386)
T PRK07550 324 ----VRHPFP---DR-PSREVARRLAKEAGILCLPGTMFGPGQEGYLRLAFANADVAGIGELVERLRAF 384 (386)
T ss_pred ----ecCCCC---CC-CHHHHHHHHHHhcCEEEeCchhhCCCCCCEEEEEeecCCHHHHHHHHHHHHhh
Confidence 665431 11 4677788888889999999999975 5799999996 899999999999875
No 60
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.95 E-value=1.5e-26 Score=201.05 Aligned_cols=188 Identities=14% Similarity=0.210 Sum_probs=138.2
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccc-c--CCccCEEEEccCccccCCCCceEEEEEecCCCccccccchh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGV-F--GSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVA 77 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~-~--~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~ 77 (233)
++|+++|++||++||+||+|.++.+++.....+.. . ...+++|+++||||.|++||+|+||+++++ +++++ +
T Consensus 171 ~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~i~~~~--~~~~~---~ 245 (364)
T PRK07865 171 RKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHTGLLAVHSLSKQSNLAGYRAGFVAGDP--ALVAE---L 245 (364)
T ss_pred HHHHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCccceEEEEeechhccCCCceeeEEEecCH--HHHHH---H
Confidence 37899999999999999999999886632222211 0 134789999999999999999999999887 44431 1
Q ss_pred hhhhhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEec
Q 047983 78 FFHSISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCG 157 (233)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~ 157 (233)
.+.+....++.+...+ .++.+++.. .+++++.++.++++++.+.+.|++. ++.. ..|+||+|+|
T Consensus 246 --------~~~~~~~~~~~~~~~q-~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~~~~~~~~--- 309 (364)
T PRK07865 246 --------LEVRKHAGMMVPAPVQ-AAMVAALGD--DAHVREQRERYARRRAVLRPALEAA-GFRV-DHSEAGLYLW--- 309 (364)
T ss_pred --------HHHHHhcCCCcCHHHH-HHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHHc-CCcc-cCCCccEEEE---
Confidence 2222222333333333 445555532 5678889999999999999999887 5553 6789999999
Q ss_pred CCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC--CCcEEEEeecCHHHHHHHHHHHH
Q 047983 158 SEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL--KDWLRITFAVEPSAFEIGLGRMK 223 (233)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~~Rl~~~~~~~~l~~~~~~l~ 223 (233)
++++ . +...+.+.|+++||.+.||..|+. .+|+||+++.+++++++++++|.
T Consensus 310 ------~~~~--~------~~~~~~~~l~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~~~~~~~~l~ 363 (364)
T PRK07865 310 ------ATRG--E------DCWDTVAWLAERGILVAPGDFYGPAGAQHVRVALTATDERIAAAVERLA 363 (364)
T ss_pred ------EeCC--C------CHHHHHHHHHHCCEEEeCccccCcCCCCEEEEEecCCHHHHHHHHHHhh
Confidence 5442 1 233344566788999999998874 68999999988899999999985
No 61
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.94 E-value=1.4e-26 Score=200.76 Aligned_cols=187 Identities=29% Similarity=0.528 Sum_probs=146.2
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCcccc-ccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVP-MGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~-~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
+|+++|++||++||+||+|.++.++...+.+ ...++...++|+++|+||.||+||+|+||+++++ .++
T Consensus 172 ~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRvG~i~~~~--------~~~--- 240 (363)
T PF00155_consen 172 ELAELAREYNIIIIVDEAYSDLIFGDPDFGPIRSLLDEDDNVIVVGSLSKSFGLPGLRVGYIVAPP--------ELI--- 240 (363)
T ss_dssp HHHHHHHHTTSEEEEEETTTTGBSSSSHTHHHHGHHTTTSTEEEEEESTTTTTSGGGTEEEEEEEH--------HHH---
T ss_pred chhhhhcccccceeeeeceeccccCCCccCcccccccccccceeeeeccccccccccccccccchh--------hhh---
Confidence 5778899999999999999999988654433 4555666679999999999999999999999976 333
Q ss_pred hhhhHHhhhhhhhhccCcchHH-HHHHHHhhhcH--HHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEec
Q 047983 81 SISLNMRMDDYLLLSESVYTTV-GAVPQILEKTE--EEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCG 157 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~ 157 (233)
+.+......... ++.. .++.+++.+.. .++++++++.++++++.+.+.|++. ++.+ .++++|+|+|
T Consensus 241 -----~~l~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-~~~~-~~~~~~~~~~--- 309 (363)
T PF00155_consen 241 -----ERLRRFQRSGLS-SSPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEI-GITV-LPPEAGFFLW--- 309 (363)
T ss_dssp -----HHHHHHHHHTTS-SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TSEE-EHHSBSSEEE---
T ss_pred -----hhhhhccccccc-cchhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHh-hhhe-eeccCccEEE---
Confidence 444444332222 3333 55555554443 3499999999999999999999888 7765 6777999999
Q ss_pred CCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEee-cCHHHHHHHHHHH
Q 047983 158 SEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFA-VEPSAFEIGLGRM 222 (233)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~-~~~~~l~~~~~~l 222 (233)
+.++.. ++.++..++++++||.+.||+.|+.++|+|++++ .+++++++++++|
T Consensus 310 ------~~~~~~------~~~~l~~~L~~~~gi~v~pg~~~~~~~~iRi~~a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 310 ------VRLDPN------DAEELAQELLEEYGILVRPGSYFGVPGYIRISLASHSEEDLEEALERL 363 (363)
T ss_dssp ------EEESHH------HHHHHHHHHHHHHTEEEEEGGGGTSTTEEEEEGGCSCHHHHHHHHHHH
T ss_pred ------EEcccc------hHHHHHHHHHHhCCEEEEecCCCCCCCEEEEEeccCCHHHHHHHHhhC
Confidence 555422 3567888888777999999999999999999994 4999999999986
No 62
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.94 E-value=3.1e-26 Score=198.59 Aligned_cols=186 Identities=16% Similarity=0.216 Sum_probs=136.3
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccc--c-CCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGV--F-GSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAF 78 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~--~-~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~ 78 (233)
+|+++|++||++||+||+|.++.+++.....+.. . ...+++|+++||||.|++||+|+||+++++ +++++ +
T Consensus 166 ~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~R~G~~i~~~--~~~~~---~- 239 (357)
T TIGR03539 166 AIVAWARERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAGYRAGFVAGDP--ALVAE---L- 239 (357)
T ss_pred HHHHHHHHcCeEEEEecchhhhccCCCCccceecccCCCccccEEEEeccccccCCCceeEEEEecCH--HHHHH---H-
Confidence 6889999999999999999999887543222211 0 124689999999999999999999999876 44421 1
Q ss_pred hhhhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecC
Q 047983 79 FHSISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGS 158 (233)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~ 158 (233)
.+.+.....+.+...+ .++..+++ ...++++.++.++++++.+.+.|++. ++. +.+|+||+|+|
T Consensus 240 -------~~~~~~~~~~~~~~~q-~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~L~~~-g~~-~~~p~~~~~~~---- 303 (357)
T TIGR03539 240 -------LTVRKHAGLMVPAPVQ-AAMVAALG--DDGHVAEQKARYAARRAQLKPALEKA-GFR-IDHSEAGLYLW---- 303 (357)
T ss_pred -------HHHHhhcccCCCHHHH-HHHHHHcC--CHHHHHHHHHHHHHHHHHHHHHHHHc-CCC-CcCCCccEEEE----
Confidence 2222222233333333 44455553 25677888999999999999999886 455 37899999999
Q ss_pred CCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC--CCcEEEEeecCHHHHHHHHHHH
Q 047983 159 EDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL--KDWLRITFAVEPSAFEIGLGRM 222 (233)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~~Rl~~~~~~~~l~~~~~~l 222 (233)
++++. +...+.+.|+++||.|.||..|+. .+|+|+|++.+++++++++++|
T Consensus 304 -----~~~~~--------~~~~~~~~l~~~gV~v~pg~~f~~~~~~~iRis~~~~~~~i~~~~~~l 356 (357)
T TIGR03539 304 -----ATRGE--------DAWDTVDRLAELGILVAPGDFYGPAGSQHVRVALTATDERIAAAVARL 356 (357)
T ss_pred -----EECCC--------CHHHHHHHHHhCCEEECCccccCCCCCCeEEEEecCCHHHHHHHHHhh
Confidence 55431 333444557788999999998874 5899999999889999999887
No 63
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.94 E-value=2.6e-26 Score=198.95 Aligned_cols=187 Identities=18% Similarity=0.294 Sum_probs=133.2
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|+++|++||++||+||+|.+|.+++.....+..++..+++|+++||||.|++||+|+||++++++ .++
T Consensus 164 ~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~~~-~~~--------- 233 (354)
T PRK06358 164 KKILDKCEKRNIYLIIDEAFMDFLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSNK-NLA--------- 233 (354)
T ss_pred HHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhccCCCCEEEEEechhhccCcchhheeeecCCH-HHH---------
Confidence 3788999999999999999999998764433344455668999999999999999999999998652 232
Q ss_pred hhhhHHhhhhhh-hhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCC
Q 047983 81 SISLNMRMDDYL-LLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSE 159 (233)
Q Consensus 81 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~ 159 (233)
..+.... .++.+...+ .+...++. ..+++++.++.++++++.+.+.|++++++.. .+|+| .|+|
T Consensus 234 -----~~~~~~~~~~~~~~~~q-~~~~~~l~--~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-~~~~g-~f~~----- 298 (354)
T PRK06358 234 -----EKLLQMREPWSINTFAD-LAGQTLLD--DKEYIKKTIQWIKEEKDFLYNGLSEFKGIKV-YKPSV-NFIF----- 298 (354)
T ss_pred -----HHHHHhCCCCcchHHHH-HHHHHHhc--cHHHHHHHHHHHHHHHHHHHHHHhcCCCcEE-cCCcc-eEEE-----
Confidence 2332221 223333333 34444442 3467889999999999999999988866553 56754 5889
Q ss_pred CcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC--CCcEEEEeecCHHHHHHHHHHHHHHH
Q 047983 160 DKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL--KDWLRITFAVEPSAFEIGLGRMKAFY 226 (233)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~~Rl~~~~~~~~l~~~~~~l~~~l 226 (233)
++++ ++.++...++ ++||.|.||+.|+. ++|+|++++.+++ .++.++.|.+++
T Consensus 299 ----~~~~--------~~~~~~~~l~-~~gI~v~~~~~f~~~~~~~iRls~~~~~~-~~~l~~~l~~~~ 353 (354)
T PRK06358 299 ----FKLE--------KPIDLRKELL-KKGILIRSCSNYRGLDENYYRVAVKSRED-NKKLLKALEVIL 353 (354)
T ss_pred ----EEcC--------chHHHHHHHH-HCCeEEEECCCCCCCCCCEEEEEeCCHHH-HHHHHHHHHHHh
Confidence 5554 2455555544 67999999999954 5799999986443 356666665543
No 64
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.94 E-value=7.6e-26 Score=199.86 Aligned_cols=201 Identities=18% Similarity=0.265 Sum_probs=139.8
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|+++|++||++||+||+|.++.... ....... ...+++|+++||||. ++||+|+||+++++ ++++. +
T Consensus 202 ~~l~~~a~~~~~~iI~De~Y~~~~~~~-~~~~~~~-~~~~~vI~~~SfSK~-~~pGlRiG~~i~~~--~l~~~---~--- 270 (416)
T PRK09440 202 EKLDALARQHNIPLLIDNAYGPPFPGI-IFSEATP-LWNPNIILCMSLSKL-GLPGVRCGIVIADE--EIIEA---L--- 270 (416)
T ss_pred HHHHHHHHHcCCcEEEeCCccccCCCc-chhhcCc-cccCCeEEEeccccc-CCCcceEEEEeCCH--HHHHH---H---
Confidence 478999999999999999998643211 1111111 125789999999996 99999999999987 44432 1
Q ss_pred hhhhHHhhhhhhhhccCcchHHHHHHHHhhhc-HHHHHHH-HHHHHHHHHHHHHHHhhc-CCCcc-cccCCCccEEEEEe
Q 047983 81 SISLNMRMDDYLLLSESVYTTVGAVPQILEKT-EEEFFSK-ITDILREAADICCDRLKE-IPCIT-CPKKPEGSMFVMYC 156 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~-~~~~~~~~~~~l~~~L~~-~~~~~-~~~~~~~g~~~~~~ 156 (233)
..+......+.+...| .+++.++.++ ..++..+ .++.+++|++.+.+.|++ ++++. .+..|+||+|+|
T Consensus 271 -----~~~~~~~~~~~s~~~q-~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~l~~~~~~~~~p~gg~fiw-- 342 (416)
T PRK09440 271 -----SNMNGIISLAPGRLGP-AIAAEMIESGDLLRLSETVIRPFYRQKVQLAIALLRRYLPDEPCLIHKPEGAIFLW-- 342 (416)
T ss_pred -----HHHHHHhccCCCcHHH-HHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCeEEecCCCceEEE--
Confidence 2223322333333444 5555555544 3345544 688899999999999977 44332 235799999999
Q ss_pred cCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC---------CCcEEEEeecCHHHHHHHHHHHHHHHH
Q 047983 157 GSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL---------KDWLRITFAVEPSAFEIGLGRMKAFYY 227 (233)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~---------~~~~Rl~~~~~~~~l~~~~~~l~~~l~ 227 (233)
++++. . +. ++.++.. .++++||.|.||+.|+. .+|+|||++.+.+++++++++|.++++
T Consensus 343 -------~~~~~--~-~~-~~~~~~~-~l~~~gV~v~pg~~F~~~~~~~~~~~~~~iRis~~~~~~~l~~~i~~l~~~~~ 410 (416)
T PRK09440 343 -------LWFKD--L-PI-TTEELYQ-RLKARGVLVVPGHYFFPGLDEDWPHAHQCIRMNYVQDDEEIEKGIAILAEEVE 410 (416)
T ss_pred -------EECCC--C-CC-CHHHHHH-HHHHCCEEEechHhhCCCCccccCCcCceEEEEecCCHHHHHHHHHHHHHHHH
Confidence 55542 1 11 3445554 56788999999999953 259999998888999999999999998
Q ss_pred HHhhc
Q 047983 228 RHAKK 232 (233)
Q Consensus 228 ~~~~~ 232 (233)
+..++
T Consensus 411 ~~~~~ 415 (416)
T PRK09440 411 KAYAE 415 (416)
T ss_pred HHhhc
Confidence 86553
No 65
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.94 E-value=4.3e-26 Score=197.18 Aligned_cols=189 Identities=19% Similarity=0.340 Sum_probs=137.8
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|+++|++||++||+||+|.++.+++ .+.++...+ .+++|+++|+||.||+||+|+||+++++ .++++ +
T Consensus 159 ~~l~~~a~~~~~~ii~De~y~~~~~~~-~~~~~~~~~-~~~~i~~~s~SK~~g~~GlRiG~~~~~~--~~~~~---~--- 228 (350)
T TIGR03537 159 KETIAMCREHGIILCSDECYTEIYFGE-PPHSALEVG-IENVLAFHSLSKRSGMTGYRSGFVAGDE--KLISF---L--- 228 (350)
T ss_pred HHHHHHHHHcCcEEEEeccccccccCC-CCCchhhcC-cCCEEEEeecccccCCccccceeeecCH--HHHHH---H---
Confidence 368899999999999999999987764 333444444 3799999999999999999999999876 34421 1
Q ss_pred hhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCCC
Q 047983 81 SISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSED 160 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~ 160 (233)
..+......+.+...+..+.+.+ . .++++++.++.++++++.+.+.|++. ++. +.+|+||+|+|
T Consensus 229 -----~~~~~~~~~~~~~~~q~~~~~~l-~--~~~~~~~~r~~l~~~~~~~~~~l~~~-g~~-~~~~~g~~~~~------ 292 (350)
T TIGR03537 229 -----RKLRANFGVASPDFVQAAAKAAW-S--DDNHVLERRKIFKRKRDLFIEFFNKV-GLE-YLYPDATFYLW------ 292 (350)
T ss_pred -----HHHHHhhccCCCHHHHHHHHHHh-C--CcHHHHHHHHHHHHHHHHHHHHHHHC-CCc-ccCCCeEEEEE------
Confidence 22222222222212222333443 2 35678889999999999999999887 455 36899999999
Q ss_pred cccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC--CCcEEEEeecCHHHHHHHHHHHHH
Q 047983 161 KCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL--KDWLRITFAVEPSAFEIGLGRMKA 224 (233)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~~Rl~~~~~~~~l~~~~~~l~~ 224 (233)
++++.. . ++.+++..++ ++||.|.||+.|+. .+|+|++++.+++++++++++|++
T Consensus 293 ---~~~~~~----~-~~~~l~~~L~-~~gv~v~~g~~f~~~~~~~~Ri~~~~~~~~~~~~l~~~~~ 349 (350)
T TIGR03537 293 ---VKVPSG----I-DAKDYALRLL-ENGIVVAPGENFGSGEEGYVRVALVPTLEECEEALRLWER 349 (350)
T ss_pred ---EECCCC----C-CHHHHHHHHH-HCCEEEcCchhhCCCCCCEEEEEecCCHHHHHHHHHHHhc
Confidence 655421 1 3555655554 67999999999975 589999998788999999999875
No 66
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.94 E-value=6.3e-26 Score=200.00 Aligned_cols=199 Identities=21% Similarity=0.267 Sum_probs=143.0
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCC-ccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGS-IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|+++|++||++||+||+|.++.+++. +.++..+.. .+++|+++||||.|++||+|+||+++++ .+++. +
T Consensus 202 ~~l~~la~~~~~~iI~DEaY~~~~~~~~-~~s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~ii~~~--~l~~~---l-- 273 (410)
T PRK06290 202 EEVVDFAKENNIIVVQDAAYAALTFDGK-PLSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAFVVGNE--LIVKA---F-- 273 (410)
T ss_pred HHHHHHHHHcCeEEEEecchhhceeCCC-CcChhcCCCccccEEEEeechhhcCCchhheEeEEeCH--HHHHH---H--
Confidence 3688999999999999999999988753 334444433 4678999999999999999999999987 44421 1
Q ss_pred hhhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCC
Q 047983 80 HSISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSE 159 (233)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~ 159 (233)
.+.......+.+...| .+...++++ .+++++.++.++++++.+.+.|+++ ++.. .+|+||+|+|
T Consensus 274 ------~~~~~~~~~~~~~~~q-~aa~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~p~g~f~l~----- 337 (410)
T PRK06290 274 ------ATVKDNNDSGQFIAIQ-KAGIYALDH--PEITEKIREKYSRRLDKLVKILNEV-GFKA-EMPGGTFYLY----- 337 (410)
T ss_pred ------HHHHhccccCCcHHHH-HHHHHHhhC--cHHHHHHHHHHHHHHHHHHHHHHhC-CCee-cCCCeeeEEE-----
Confidence 2222222222222333 455555543 3678899999999999999999987 5553 6799999999
Q ss_pred CcccccccccccCC--CCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec---CHHHHHHHHHHHHHHHHHH
Q 047983 160 DKCLLKLNYSLLEG--INSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV---EPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 160 ~~~~~~~~~~~~~~--~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~---~~~~l~~~~~~l~~~l~~~ 229 (233)
++++.....+ ..++.+++.+++++.+|+++||+.|+ +|+||+++. ++++-++.++.|.+.|.+.
T Consensus 338 ----v~lp~~~~~~~~~~~~~~~~~~Ll~~~~v~~~p~~~~~--~~lRi~~~~~~~~~~~~~~~~~~l~~~~~~~ 406 (410)
T PRK06290 338 ----VKAPKGTKSGIKFENAEEFSQYLIKEKLISTVPWDDAG--HFLRFSVTFEAKDEEEEDRILEEIKRRLSDV 406 (410)
T ss_pred ----EECCCccccCCCCCCHHHHHHHHHHhCCEEEECCcccc--CeEEEEEEcccccccchhHHHHHHHHHHhhc
Confidence 6554221101 12467888888888889999998876 799999994 5566677777777776553
No 67
>PLN02672 methionine S-methyltransferase
Probab=99.94 E-value=1.2e-25 Score=213.36 Aligned_cols=201 Identities=18% Similarity=0.210 Sum_probs=144.4
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCcc--cccc----ccCC---ccCEEEEccCccccCCCCceEEEEEecCCCccc
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHF--VPMG----VFGS---IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGIL 71 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~--~~~~----~~~~---~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~ 71 (233)
++|+++|++||++||+||+|+++.|++... .++. ..+. ..++|+++||||.|++||+|+||+++++. .++
T Consensus 852 e~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGLRIGylIap~~-eLi 930 (1082)
T PLN02672 852 EEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGHEFGFLALNDS-VLI 930 (1082)
T ss_pred HHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhccHHHHheeEEeCCH-HHH
Confidence 378999999999999999999999976431 1121 1121 24799999999999999999999999762 133
Q ss_pred cccchhhhhhhhhHHhhhhhhhhcc-CcchHH--HHHHHHhh--hc-HHHHHHHHHHHHHHHHHHHHHHhhcCCCccccc
Q 047983 72 QDLGVAFFHSISLNMRMDDYLLLSE-SVYTTV--GAVPQILE--KT-EEEFFSKITDILREAADICCDRLKEIPCITCPK 145 (233)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~l~--~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 145 (233)
..+......+. ....+. .+...++. .. ..+++.+.++.+++|++++.+.|++. ++. +.
T Consensus 931 --------------~~l~~~~~~s~~~~~~q~Aaaaalall~~~~~~~~~~l~e~r~~Lk~rRd~L~e~L~~~-Gi~-v~ 994 (1082)
T PLN02672 931 --------------DAFHSAPGLSRPHSTLKYTIKKLLGLKNQKSSDLLDGVAEQKKILKSRAERLKETLEAC-GWD-VL 994 (1082)
T ss_pred --------------HHHHHhhhhcCCCcHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCe-Ee
Confidence 33333222221 122232 12222221 12 34678899999999999999999987 565 47
Q ss_pred CCCccEEEEEecCCCccccccc----------cccc-CC-CCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeecCHH
Q 047983 146 KPEGSMFVMYCGSEDKCLLKLN----------YSLL-EG-INSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAVEPS 213 (233)
Q Consensus 146 ~~~~g~~~~~~~~~~~~~~~~~----------~~~~-~~-~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~~~~ 213 (233)
+|+||||+| ++++ .+.. .+ ..++.++..++++++||.+.||+.|+.++|+||+++.+++
T Consensus 995 ~PeGGFfLw---------l~l~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~FG~~g~~RIsfa~~~e 1065 (1082)
T PLN02672 995 EPQGGISMV---------AKPSAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWTGIPGYCRFSFALEDS 1065 (1082)
T ss_pred cCCcEEEEE---------EEccccccccccccccccccccCCCHHHHHHHHHHcCCEEEecCcccCCCCeEEEEecCCHH
Confidence 899999999 4321 1100 00 1146788888888889999999999888999999999999
Q ss_pred HHHHHHHHHHHHHH
Q 047983 214 AFEIGLGRMKAFYY 227 (233)
Q Consensus 214 ~l~~~~~~l~~~l~ 227 (233)
++++++++|.++.+
T Consensus 1066 ~LeeALerL~kf~~ 1079 (1082)
T PLN02672 1066 EFDRALKAIARFKE 1079 (1082)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998764
No 68
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.94 E-value=2.2e-25 Score=195.73 Aligned_cols=195 Identities=18% Similarity=0.283 Sum_probs=141.7
Q ss_pred ChHHHHHHH------cCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCcccccc
Q 047983 1 FCIEETTKK------LGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDL 74 (233)
Q Consensus 1 ~~i~~l~~~------~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~ 74 (233)
++|+++|++ ||++||+||+|.++.+++....++. ...+++++++|+||.|++||+|+||+++++ .+.+..
T Consensus 191 ~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~--~~~~~~i~~~S~SK~~~~pGlRiG~~~~~~--~~~~~~ 266 (394)
T PRK06836 191 KALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIF--KYYDNSIVVYSFSKSLSLPGERIGYIAVNP--EMEDAD 266 (394)
T ss_pred HHHHHHHHHhhhccCCCeEEEEeccccccccCCCCCCChH--HccCcEEEEecchhhccCcceeeEEEecCH--HHhhhH
Confidence 368899999 8999999999999988764333332 234689999999999999999999999987 332110
Q ss_pred chhhhhhhhhHHhhhhhhhh--ccCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccE
Q 047983 75 GVAFFHSISLNMRMDDYLLL--SESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSM 151 (233)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~ 151 (233)
.+. ......... ..+.+... .+++.++++. ..++.++++++.+.+.|+++ ++. +..|.||+
T Consensus 267 ~~~--------~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~------~~~~~~~~~r~~l~~~L~~~-g~~-~~~~~gg~ 330 (394)
T PRK06836 267 DLV--------AALVFANRILGFVNAPALMQRVVAKCLDAT------VDVSIYKRNRDLLYDGLTEL-GFE-CVKPQGAF 330 (394)
T ss_pred HHH--------HHHHHHhhccccccCCHHHHHHHHHHhCCh------HHHHHHHHHHHHHHHHHHhC-CCE-eecCCceE
Confidence 111 111111110 11223322 5666665432 13567889999999999887 555 37899999
Q ss_pred EEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeecCHHHHHHHHHHHHHHHHHHhh
Q 047983 152 FVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAVEPSAFEIGLGRMKAFYYRHAK 231 (233)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~~~~~l~~~~~~l~~~l~~~~~ 231 (233)
|+| ++++.. ++.+++ ..|+++||.|.||+.|+..+|+||+++.+++++++++++|.+++++|++
T Consensus 331 ~~~---------~~~~~~------~~~~~~-~~l~~~gv~v~~g~~f~~~~~iRi~~~~~~~~~~~~i~~l~~~l~~~~~ 394 (394)
T PRK06836 331 YLF---------PKSPEE------DDVAFC-EKAKKHNLLLVPGSGFGCPGYFRLSYCVDTETIERSLPAFEKLAKEYKG 394 (394)
T ss_pred EEE---------EeCCCC------CHHHHH-HHHHhCCEEEECchhcCCCCeEEEEecCCHHHHHHHHHHHHHHHHHhcC
Confidence 999 555421 355555 6677889999999999878999999998999999999999999999874
No 69
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.94 E-value=1.6e-25 Score=192.30 Aligned_cols=184 Identities=17% Similarity=0.160 Sum_probs=128.0
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHS 81 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~ 81 (233)
+|+++|++++++||+||+|.+|.+++. ..........+++|+++||||.|++||+|+||+++++ +++
T Consensus 146 ~l~~~a~~~~~~iI~DE~Y~~~~~~~~-~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiGy~v~~~--~li---------- 212 (332)
T PRK06425 146 TISEICRKKGALLFIDEAFIDFVPNRA-EEDVLLNRSYGNVIIGRSLTKILGIPSLRIGYIATDD--YNM---------- 212 (332)
T ss_pred HHHHHHHHcCCEEEEecchhccccccc-hhHHHHhccCCCEEEEeecHHhcCCchhhheeeecCH--HHH----------
Confidence 688999999999999999999987542 1122222345799999999999999999999999987 343
Q ss_pred hhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCCCc
Q 047983 82 ISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSEDK 161 (233)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~ 161 (233)
..+..... ..+... .+.+.+.....+.++++.++.++++++.+.+.|+++ ++.. ..|.+|.|+|
T Consensus 213 ----~~l~~~~~-~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~-~~~~~g~f~~------- 276 (332)
T PRK06425 213 ----KISRKITE-PWSVCD--PAIDFIRSIDLDYVAKHSLDIMENERSYLINNLEAM-GFRA-AGDPSANFIT------- 276 (332)
T ss_pred ----HHHHHcCC-CCccCH--HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHC-CCEE-CCCCCceEEE-------
Confidence 33332211 111111 112222111234677889999999999999999987 4543 3445788999
Q ss_pred ccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC--CCcEEEEeecCHHHHHHHHHHHHHHH
Q 047983 162 CLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL--KDWLRITFAVEPSAFEIGLGRMKAFY 226 (233)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~~Rl~~~~~~~~l~~~~~~l~~~l 226 (233)
++++ ++.++...++ ++||.|+||+.|+. ++|+|++++..+ +.+..++.|++++
T Consensus 277 --~~~~--------~~~~~~~~l~-~~gi~v~~~~~f~~~~~~~iRis~~~~~-~~~~l~~al~~~~ 331 (332)
T PRK06425 277 --FMIP--------DAHDFYSYLL-KNGILVRLLDDYECLGEQYIRIAIRRRS-FNIKLVNALRNFL 331 (332)
T ss_pred --EEcC--------CHHHHHHHHH-HCCeEEEECCCCCCCCCCEEEEEeCCHH-HHHHHHHHHHHHh
Confidence 5553 2566665555 57999999999964 579999999654 4466666666543
No 70
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.94 E-value=1.5e-25 Score=194.52 Aligned_cols=185 Identities=17% Similarity=0.259 Sum_probs=134.5
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|.++|+++++ +|+||+|.+|.+++.....+..++..+++|+++||||.|++||+|+||+++++ +++
T Consensus 168 ~~l~~l~~~~~~-~IiDE~y~~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~~~--~~~--------- 235 (360)
T PRK07392 168 EAILPLLEQFAL-VVVDEAFMDFLPPDAEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIAHP--DRL--------- 235 (360)
T ss_pred HHHHHHHHHCCE-EEEECchhhhccCccccchHHHhhcCCCEEEEEechhhhcCCchheeeeeCCH--HHH---------
Confidence 478999999986 66699999998765332223334556789999999999999999999999987 343
Q ss_pred hhhhHHhhhhhh-hhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCC
Q 047983 81 SISLNMRMDDYL-LLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSE 159 (233)
Q Consensus 81 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~ 159 (233)
..+.... .++.+...+ .++.+++++ ..+.+..++.++++++.+.+.|++++++.. .|.+++|+|
T Consensus 236 -----~~~~~~~~~~~~s~~~q-~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~--~~~~~~fl~----- 300 (360)
T PRK07392 236 -----QRWQQWRDPWPVNGLAA-AAAIAALAD--RDFQQQTWAWLPPAREALFQGLASLPGLTP--LPSAANFLL----- 300 (360)
T ss_pred -----HHHHhhCCCCCCCHHHH-HHHHHHhcc--HHHHHHHHHHHHHHHHHHHHHHHhCCCcEE--CCCCCCEEE-----
Confidence 3333221 133333333 555555543 456777788899999999999988877653 457899999
Q ss_pred CcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC--CCcEEEEeecC--HHHHHHHHHHHH
Q 047983 160 DKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL--KDWLRITFAVE--PSAFEIGLGRMK 223 (233)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~~Rl~~~~~--~~~l~~~~~~l~ 223 (233)
++++ . ++.++..++++++||.|.||+.|+. .+|+||+++.+ .+.+.++++++.
T Consensus 301 ----~~~~--~-----~~~~l~~~ll~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~~~l~~al~~~~ 357 (360)
T PRK07392 301 ----VQSQ--G-----SALQLQEKLLQQHRILIRDCLSFPELGDRYFRVAVRTEAENQRLLEALAAIL 357 (360)
T ss_pred ----EEcC--C-----CHHHHHHHHHhhCCEEEEeCCCCCCCCCCEEEEEeCCHHHHHHHHHHHHHHh
Confidence 5543 1 3667777778889999999999975 57999999974 356666666543
No 71
>PLN02397 aspartate transaminase
Probab=99.93 E-value=3.3e-25 Score=196.22 Aligned_cols=188 Identities=16% Similarity=0.121 Sum_probs=135.8
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCC--ccccccccC-CccCEEEEccCccccCCCCceEEEEE--ecCCCccccccc
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNT--HFVPMGVFG-SIVPVLTLGSISKRWIVPGWRLGWLV--TSDPNGILQDLG 75 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~--~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~R~G~~~--~~~~~~~~~~~~ 75 (233)
++|+++|++||++||+||+|.+|.+++. .+.++..+. ..+++|+++||||.|+++|||+||++ +++. ++++ .
T Consensus 217 ~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~G~RvG~~v~~~~~~-~~~~--~ 293 (423)
T PLN02397 217 EQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVEDGHEILVAQSYAKNMGLYGERVGALSVVCKSA-DVAV--R 293 (423)
T ss_pred HHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhcCCcEEEEEECcccCCCccccceEEEEEeCCH-HHHH--H
Confidence 4789999999999999999999998651 223333332 33579999999999999999999986 3321 2222 1
Q ss_pred hhhhhhhhhHHhhhhhhh-hccCcchHH-HHHHHHhhhcH--H---HHHHHHHHHHHHHHHHHHHHhhcCC---Cccccc
Q 047983 76 VAFFHSISLNMRMDDYLL-LSESVYTTV-GAVPQILEKTE--E---EFFSKITDILREAADICCDRLKEIP---CITCPK 145 (233)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~l~~~~--~---~~~~~~~~~~~~~~~~l~~~L~~~~---~~~~~~ 145 (233)
+. ..+..... ...+++.+. .+++.+++++. + ++++++++.+++|++.+.+.|++++ ++.+ .
T Consensus 294 ~~--------~~~~~~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~~~~~~~~-~ 364 (423)
T PLN02397 294 VK--------SQLKLIARPMYSNPPIHGASIVATILGDPELFSEWTKELKGMADRIISMRQKLYDALEARGSPGDWSH-I 364 (423)
T ss_pred HH--------HHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCc-c
Confidence 22 23322221 122334433 55556565431 2 3478899999999999999999873 2553 6
Q ss_pred CCCccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEee-cCHHHHHHHHHHHHH
Q 047983 146 KPEGSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFA-VEPSAFEIGLGRMKA 224 (233)
Q Consensus 146 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~-~~~~~l~~~~~~l~~ 224 (233)
.|+||||+| +++ +.+++.++++++||.+.++ + |++++ .+.+++++++++|.+
T Consensus 365 ~p~gg~fl~-----------~~l--------~~~~~~~Ll~~~~V~v~~~------~--Ri~~~~~~~~~i~~~~~~i~~ 417 (423)
T PLN02397 365 TKQIGMFSF-----------TGL--------NKEQVDRMTKEYHIYMTRD------G--RISMAGLSSKNVPYLADAIHA 417 (423)
T ss_pred cCCceEEEe-----------cCC--------CHHHHHHHHHhCCEEECCC------C--eEEEeeCCHHHHHHHHHHHHH
Confidence 799999999 443 3459999999999999853 2 99998 599999999999999
Q ss_pred HHH
Q 047983 225 FYY 227 (233)
Q Consensus 225 ~l~ 227 (233)
+++
T Consensus 418 ~~~ 420 (423)
T PLN02397 418 VVT 420 (423)
T ss_pred HHh
Confidence 985
No 72
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.93 E-value=7e-25 Score=192.63 Aligned_cols=186 Identities=18% Similarity=0.154 Sum_probs=135.4
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCC-CccccccccC-CccCEEEEccCccccCCCCceEEEEEe--cCCCccccccch
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGN-THFVPMGVFG-SIVPVLTLGSISKRWIVPGWRLGWLVT--SDPNGILQDLGV 76 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~-~~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~R~G~~~~--~~~~~~~~~~~~ 76 (233)
++|+++|++||++||+||+|.++.++. ....++..+. ..+++|+++||||.|++||+|+||+++ ++. +.+. .+
T Consensus 195 ~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRiG~~~~~~~~~-~~~~--~~ 271 (396)
T PRK09257 195 DELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLELLVASSFSKNFGLYGERVGALSVVAEDA-EEAD--RV 271 (396)
T ss_pred HHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHhcCCcEEEEEEcCCcCccccccceeEEEEeCCH-HHHH--HH
Confidence 478999999999999999999998752 2234444443 346899999999999999999999984 221 2221 12
Q ss_pred hhhhhhhhHHhhhhhhh-hccCcchHH-HHHHHHhhhc-----HHHHHHHHHHHHHHHHHHHHHHhhcCC---CcccccC
Q 047983 77 AFFHSISLNMRMDDYLL-LSESVYTTV-GAVPQILEKT-----EEEFFSKITDILREAADICCDRLKEIP---CITCPKK 146 (233)
Q Consensus 77 ~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~l~~~-----~~~~~~~~~~~~~~~~~~l~~~L~~~~---~~~~~~~ 146 (233)
+ ..+..... ...+++... .+++.++... .+++++++++.+++|++.+.+.|++.. ++. +..
T Consensus 272 ~--------~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~rr~~l~~~L~~~~~~~~~~-~~~ 342 (396)
T PRK09257 272 L--------SQLKATIRTNYSNPPAHGAAIVATILNDPELRAEWEAELEEMRERIKAMRQLLVEALKAKGPSRDFD-FIA 342 (396)
T ss_pred H--------HHHHHHhhhhcCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcc-ccc
Confidence 2 33322211 112223333 5666666543 257888999999999999999998853 244 368
Q ss_pred CCccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec-CHHHHHHHHHHHHHH
Q 047983 147 PEGSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV-EPSAFEIGLGRMKAF 225 (233)
Q Consensus 147 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~-~~~~l~~~~~~l~~~ 225 (233)
|+||+|+| +++ +.+++.++++++||.+.|. + |++++. +++.+++++++|.++
T Consensus 343 p~gg~~~w---------~~l----------~~~~~~~l~~~~~V~~~p~------~--ri~~~~~~~~~i~~~~~~i~~~ 395 (396)
T PRK09257 343 RQRGMFSY---------SGL----------TPEQVDRLREEFGVYAVGS------G--RINVAGLNESNIDYVAEAIAAV 395 (396)
T ss_pred ccceEEEe---------cCC----------CHHHHHHHHHcCCEEEcCC------C--eEEEeeCCHHHHHHHHHHHHhh
Confidence 99999999 444 3467788899999999983 2 999985 999999999999865
No 73
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.93 E-value=8.5e-25 Score=192.57 Aligned_cols=187 Identities=18% Similarity=0.163 Sum_probs=134.1
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCC--ccccccccC-CccCEEEEccCccccCCCCceEEEEE---ecCCCcccccc
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNT--HFVPMGVFG-SIVPVLTLGSISKRWIVPGWRLGWLV---TSDPNGILQDL 74 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~--~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~R~G~~~---~~~~~~~~~~~ 74 (233)
++|+++|++|+++||+||+|.+|.+++. .+.++..+. ..+++|+++||||.|++||+|+||++ +++ ++++
T Consensus 199 ~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRvG~~~~~~~~~--~~~~-- 274 (404)
T PTZ00376 199 KEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAERGVEFLVAQSFSKNMGLYGERIGALHIVCANK--EEAA-- 274 (404)
T ss_pred HHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhcCCcEEEEEeCCCcccccccccceEEEEeCCH--HHHH--
Confidence 3789999999999999999999998642 222333332 23689999999999999999999984 443 3332
Q ss_pred chhhhhhhhhHHhhhhhhh-hccCcchHH-HHHHHHhhhcH--H---HHHHHHHHHHHHHHHHHHHHhhcCC---Ccccc
Q 047983 75 GVAFFHSISLNMRMDDYLL-LSESVYTTV-GAVPQILEKTE--E---EFFSKITDILREAADICCDRLKEIP---CITCP 144 (233)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~l~~~~--~---~~~~~~~~~~~~~~~~l~~~L~~~~---~~~~~ 144 (233)
.++ ..+..... ...+.+.+. .+.+.++++.. + +++++.++.+++|++.+.+.|++++ ++. +
T Consensus 275 ~l~--------~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~-~ 345 (404)
T PTZ00376 275 NVL--------SQLKLIIRPMYSSPPIHGARIADRILSDPELRAEWLSELKEMSGRIQNMRQLLYDELKALGSPGDWE-H 345 (404)
T ss_pred HHH--------HHHHHHHhhhcCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccc-c
Confidence 122 33322211 112223333 55555555432 2 4467778899999999999998863 233 2
Q ss_pred cCCCccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEee-cCHHHHHHHHHHHH
Q 047983 145 KKPEGSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFA-VEPSAFEIGLGRMK 223 (233)
Q Consensus 145 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~-~~~~~l~~~~~~l~ 223 (233)
..|+||+|+| +++ +.+++.++++++||.+.||. |++++ .+.+++++++++|.
T Consensus 346 ~~p~gg~f~~---------~~~----------~~~~~~~L~~~~~v~v~p~~--------Ris~~~~~~~~~~~~~~~l~ 398 (404)
T PTZ00376 346 IINQIGMFSF---------TGL----------TKEQVERLIEKYHIYLLDNG--------RISVAGLTSKNVDYVAEAIH 398 (404)
T ss_pred cccCceEEEe---------cCC----------CHHHHHHHHHhCCEeecCCC--------eEEEeccCHHhHHHHHHHHH
Confidence 5789999999 443 45788899989999999971 99998 58999999999999
Q ss_pred HHHH
Q 047983 224 AFYY 227 (233)
Q Consensus 224 ~~l~ 227 (233)
+++.
T Consensus 399 ~~~~ 402 (404)
T PTZ00376 399 DVVR 402 (404)
T ss_pred HHHh
Confidence 8875
No 74
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=1e-24 Score=189.62 Aligned_cols=180 Identities=16% Similarity=0.215 Sum_probs=122.9
Q ss_pred HHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhhhh
Q 047983 3 IEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHSI 82 (233)
Q Consensus 3 i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~~ 82 (233)
|++.|+ ++++||+||+|.+|.+.. ..+...+..+|+|+++||||.|++||+|+||+++++ +++
T Consensus 177 l~~~~~-~~~~iI~Deay~~f~~~~---~~~~~~~~~~~vi~~~SfSK~~gl~GlRvGy~v~~~--~l~----------- 239 (364)
T PRK04781 177 ALQALQ-GKALVVVDEAYGEFSDVP---SAVGLLARYDNLAVLRTLSKAHALAAARIGSLIANA--ELI----------- 239 (364)
T ss_pred HHHhCC-CCcEEEEeCcchhhcCCc---chHHHHhhCCCEEEEecChhhcccccceeeeeeCCH--HHH-----------
Confidence 444443 479999999999997532 122223556889999999999999999999999987 344
Q ss_pred hhHHhhhhhh-hhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCCCc
Q 047983 83 SLNMRMDDYL-LLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSEDK 161 (233)
Q Consensus 83 ~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~ 161 (233)
..+.... .++.+...+ .+...+++++..++..+..+.++++++.+.+.|++++++.. ..|.+|+|+|
T Consensus 240 ---~~l~~~~~~~~~~~~~~-~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-~~p~~g~f~~------- 307 (364)
T PRK04781 240 ---AVLRRCQAPYPVPTPCA-ALAEQALSAPALAVTARRVAEVRAERERLHAALAQLPGVRR-VYPSQGNFLL------- 307 (364)
T ss_pred ---HHHHhccCCCCCCHHHH-HHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCCe-ECCCCCcEEE-------
Confidence 3333322 233333444 33334555443455566666789999999999988866542 4577899999
Q ss_pred ccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC-CCcEEEEeecCHHHHHHHHHHHH
Q 047983 162 CLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL-KDWLRITFAVEPSAFEIGLGRMK 223 (233)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~-~~~~Rl~~~~~~~~l~~~~~~l~ 223 (233)
++++ +.+.+.+.++++||.|.||..|+. ++|+||+++.+++ .+..++.|+
T Consensus 308 --~~~~---------~~~~~~~~l~~~gI~v~~~~~~~~~~~~~Ris~~~~~~-~~~l~~al~ 358 (364)
T PRK04781 308 --VRFD---------DAEAAFQALLAAGVVVRDQRAAPRLSDALRITLGTPEQ-NDRVLAALQ 358 (364)
T ss_pred --EEcC---------CHHHHHHHHHHCCeEEeeCCCCCCCCCeEEEeCCCHHH-HHHHHHHHH
Confidence 5553 234455667789999999987754 6899999996432 244444443
No 75
>PRK07908 hypothetical protein; Provisional
Probab=99.92 E-value=5e-24 Score=184.18 Aligned_cols=184 Identities=18% Similarity=0.238 Sum_probs=132.8
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|.++|++ +.++|+||+|+++..+ ...++... ..+++++++||||.|++||+|+||+++++ +++
T Consensus 159 ~~l~~l~~~-~~~iIvDe~y~~~~~~--~~~~l~~~-~~~~~i~i~S~SK~~~l~GlRiG~~~~~~--~~~--------- 223 (349)
T PRK07908 159 EQLLALRRP-GRILVVDEAFADAVPG--EPESLAGD-DLPGVLVLRSLTKTWSLAGLRVGYALGAP--DVL--------- 223 (349)
T ss_pred HHHHHHHhc-CCEEEEECcchhhccC--Cccccccc-cCCCEEEEeecccccCCccceeeeeecCH--HHH---------
Confidence 368888864 7888899999998643 23344433 33689999999999999999999999876 344
Q ss_pred hhhhHHhhhhhhh-hccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCC
Q 047983 81 SISLNMRMDDYLL-LSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSE 159 (233)
Q Consensus 81 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~ 159 (233)
..+..... ++.++..+ .++..+++....+++++.++.++++++.+.+.|+++ ++.. ..|.+|+|+|
T Consensus 224 -----~~~~~~~~~~~~~~~~~-~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~-~~p~~g~~~~----- 290 (349)
T PRK07908 224 -----ARLTRGRAHWPVGTLQL-EAIAACCAPRAVAEAAADAARLAADRAEMVAGLRAV-GARV-VDPAAAPFVL----- 290 (349)
T ss_pred -----HHHHhcCCCCCccHHHH-HHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhC-CcEe-ccCCCceEEE-----
Confidence 33332211 22232222 556666654455788999999999999999999887 5653 6778999999
Q ss_pred CcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC--CCcEEEEeecCHHHHHHHHHHHHHHH
Q 047983 160 DKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL--KDWLRITFAVEPSAFEIGLGRMKAFY 226 (233)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~~Rl~~~~~~~~l~~~~~~l~~~l 226 (233)
++++ +.+.+.+.|+++||.|.||+.|+. .+|+|+|++. +++.+++++.|++++
T Consensus 291 ----~~~~---------~~~~~~~~l~~~gI~v~~g~~f~~~~~~~vRis~~~-~~~~~~l~~al~~~~ 345 (349)
T PRK07908 291 ----VRVP---------DAELLRKRLRERGIAVRRGDTFPGLDPDYLRLAVRP-RAEVPVLVQALAEIL 345 (349)
T ss_pred ----EECC---------cHHHHHHHHHhCCEEEEECCCCCCCCCCeEEEEeCC-CccHHHHHHHHHHHH
Confidence 5543 245677778899999999999964 6899999985 334466666665554
No 76
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.92 E-value=2.9e-24 Score=186.19 Aligned_cols=184 Identities=23% Similarity=0.343 Sum_probs=127.2
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHS 81 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~ 81 (233)
+|+++|++++++||+||+|.+|.+++..+.+. +...+++|+++||||.|++||+|+||++++++ .++
T Consensus 166 ~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~--~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~-~~~---------- 232 (356)
T PRK08056 166 AIAERCKSLNIALILDEAFIDFIPDETGFIPQ--LADNPHLWVLRSLTKFYAIPGLRLGYLVNSDD-AAV---------- 232 (356)
T ss_pred HHHHHHHhcCCEEEEecchhccCCcchHHHHH--hccCCCEEEEEechhhccCcchhheeeecCCH-HHH----------
Confidence 68899999999999999999998765332222 23346899999999999999999999998642 232
Q ss_pred hhhHHhhhhhhh-hccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCCC
Q 047983 82 ISLNMRMDDYLL-LSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSED 160 (233)
Q Consensus 82 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~ 160 (233)
..+..... ++.+...+ .+...++. ...+.++.++.++++++.+.+.|++++++.. . |.+|+|+|
T Consensus 233 ----~~l~~~~~~~~~~~~~~-~~a~~~l~--~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-~-~~~~~~~~------ 297 (356)
T PRK08056 233 ----ARMRRQQMPWSINAFAA-LAGEVILQ--DRAYQQATWQWLAEEGARFYQALCALPLLTV-W-PGRANYLF------ 297 (356)
T ss_pred ----HHHHHhCCCCchhHHHH-HHHHHHhC--CHHHHHHHHHHHHHHHHHHHHHHhcCCCcEE-c-CCCCcEEE------
Confidence 33332211 22222222 33344442 3567888899999999999999988867653 3 44789999
Q ss_pred cccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC--CCcEEEEeecCHHHHHHHHHHHHHH
Q 047983 161 KCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL--KDWLRITFAVEPSAFEIGLGRMKAF 225 (233)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~~Rl~~~~~~~~l~~~~~~l~~~ 225 (233)
++++. ++.++...++ ++||.|.||+.|+. .+|+||+++.++ +.+..++.|.++
T Consensus 298 ---~~~~~-------~~~~~~~~l~-~~gI~v~~~~~f~~~~~~~iRis~~~~~-~~~~l~~~l~~~ 352 (356)
T PRK08056 298 ---LRCER-------PDIDLQRALL-TQRILIRSCANYPGLDSRYYRVAIRSAA-ENERLLAALRNV 352 (356)
T ss_pred ---EEcCC-------ChHHHHHHHH-HCCeEEEECCCCCCCCCCEEEEEEcCHH-HHHHHHHHHHHH
Confidence 55541 2445555544 78999999999954 479999998633 334555555444
No 77
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=2.3e-24 Score=186.89 Aligned_cols=184 Identities=16% Similarity=0.217 Sum_probs=131.2
Q ss_pred hHHHHHHH--cCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 2 CIEETTKK--LGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 2 ~i~~l~~~--~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
+|.++++. +|++||+||+|.++.+++..+..+..++..+++|+++||||.|++||+|+||+++++ +++
T Consensus 172 ~l~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~--~~~-------- 241 (359)
T PRK03158 172 ELLSFLESVPSHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVLRTFSKAYGLAALRVGYGIASE--ELI-------- 241 (359)
T ss_pred HHHHHHHhCCCCcEEEEECchHhhcCCcccccHHHHHHhcCCEEEEEechHhhcCcchhhehhcCCH--HHH--------
Confidence 56667765 599999999999998765433333444556799999999999999999999999987 344
Q ss_pred hhhhhHHhhhhhh-hhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecC
Q 047983 80 HSISLNMRMDDYL-LLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGS 158 (233)
Q Consensus 80 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~ 158 (233)
..+.... .++.+...+ .++.++++ ..++.++.++.++++++.+.+.|++. ++.. .|.+|+|+|
T Consensus 242 ------~~~~~~~~~~~~~~~~q-~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~--~~~~g~~i~---- 305 (359)
T PRK03158 242 ------EKLNIARPPFNTTRIAQ-YAAIAALE--DQAFLKECVEKNAEGLEQYYAFCKEY-GLFY--YPSQTNFIF---- 305 (359)
T ss_pred ------HHHHHhcCCCCCCHHHH-HHHHHHhc--CHHHHHHHHHHHHHHHHHHHHHHHHC-CCee--CCCcCcEEE----
Confidence 2332221 133333333 44555553 24677888888999999999999887 5543 355688999
Q ss_pred CCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeecCHHHHHHHHHHHHHH
Q 047983 159 EDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAVEPSAFEIGLGRMKAF 225 (233)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~~~~~l~~~~~~l~~~ 225 (233)
++++ . ++.++...+ .++||.|.||+.|+..+|+|++++. .++.+..++.|+++
T Consensus 306 -----~~~~--~-----~~~~~~~~l-~~~gv~v~~g~~f~~~~~iRi~~~~-~~~~~~l~~al~~~ 358 (359)
T PRK03158 306 -----VDTG--R-----DANELFEAL-LKKGYIVRSGAALGFPTGVRITIGL-KEQNDKIIELLKEL 358 (359)
T ss_pred -----EECC--C-----CHHHHHHHH-HHCCeEEeeCCCCCCCCeEEEecCC-HHHHHHHHHHHHHh
Confidence 5442 1 255555555 4679999999999878999999984 44567777777654
No 78
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=3.8e-24 Score=185.50 Aligned_cols=178 Identities=19% Similarity=0.277 Sum_probs=128.9
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHS 81 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~ 81 (233)
+|+++|++ +++||+||+|.+|.+++. .+..+...+++|+++||||.|++||+|+||+++++ +++
T Consensus 178 ~l~~~~~~-~~~iI~De~y~~~~~~~~---~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~--~~~---------- 241 (357)
T PRK14809 178 ALAERTDE-ETLVVVDEAYGEFAERPS---AVALVEERDDVAVLRTFSKAYGLAGLRLGYAVVPE--EWA---------- 241 (357)
T ss_pred HHHHhCcc-CcEEEEechhhhccCCch---hHHHHhhCCCEEEEecchhHhcCcchhheeeecCH--HHH----------
Confidence 34444443 789999999999986432 22233456789999999999999999999999987 343
Q ss_pred hhhHHhhhhhh-hhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCCC
Q 047983 82 ISLNMRMDDYL-LLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSED 160 (233)
Q Consensus 82 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~ 160 (233)
.++.... .++.+...+..+++.+ . .++++++.++.++++++.+.+.|+.. ..|.+|+|+|
T Consensus 242 ----~~~~~~~~~~~~~~~~~~~a~~~l-~--~~~~~~~~~~~~~~~r~~l~~~L~~~------~~~~~g~f~~------ 302 (357)
T PRK14809 242 ----DAYARVNTPFAASELACRAGLAAL-D--DDEHVERTVETARWAREYIREELDAP------TWESAGNFVL------ 302 (357)
T ss_pred ----HHHHHhCCCCCCCHHHHHHHHHHh-C--CHHHHHHHHHHHHHHHHHHHHHhcCc------cCCCCCCEEE------
Confidence 3333222 2333333332444443 2 36788999999999999999998653 1256889999
Q ss_pred cccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeecCHHHHHHHHHHHHHHHH
Q 047983 161 KCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAVEPSAFEIGLGRMKAFYY 227 (233)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~~~~~l~~~~~~l~~~l~ 227 (233)
++++ ++.++... |+++||.|.||+.|+..+|+|++++. .+++++++++|.++++
T Consensus 303 ---~~~~--------~~~~~~~~-l~~~gv~v~~g~~f~~~~~iRls~~~-~~~~~~~l~~L~~~l~ 356 (357)
T PRK14809 303 ---AEVG--------DASAVAEA-AQERGVIVRDCTSFGLPECIRITCGT-REETERAVEVLNEVLA 356 (357)
T ss_pred ---EECC--------CHHHHHHH-HHHCCEEEEECccCCCCCeEEEecCC-HHHHHHHHHHHHHHhc
Confidence 5542 24555544 67889999999999878999999875 6789999999998874
No 79
>PRK08637 hypothetical protein; Provisional
Probab=99.92 E-value=1.2e-23 Score=184.36 Aligned_cols=198 Identities=16% Similarity=0.167 Sum_probs=138.5
Q ss_pred ChHHHHHHH-----cCcEEEEccccCccccCCCccccc-cc-cCCccCE--EEEccCccccCCCCceEEEEEecC----C
Q 047983 1 FCIEETTKK-----LGIMVIADEVYGHLVFGNTHFVPM-GV-FGSIVPV--LTLGSISKRWIVPGWRLGWLVTSD----P 67 (233)
Q Consensus 1 ~~i~~l~~~-----~~~~lI~De~y~~~~~~~~~~~~~-~~-~~~~~~~--i~~~s~sK~~~~~G~R~G~~~~~~----~ 67 (233)
++|+++|++ ||++||+||+|.++.|++....++ .. .+..+++ ++++|+||.|++||+|+||+++++ +
T Consensus 169 ~~l~~~~~~~~~~~~~~~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~~~~~~~~~~ 248 (388)
T PRK08637 169 TAIVEAIKELADAGTKVVAVVDDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFITFGTKAGSS 248 (388)
T ss_pred HHHHHHHHHHHhcCCcEEEEecccchhcccCCccchhhHHHhhcccccceEEEeccccccCCCcccceEEEEEccccCCc
Confidence 367888775 999999999999999877544343 22 2334564 566799999999999999999763 1
Q ss_pred CccccccchhhhhhhhhHHhhhhh---hhhccCcchHHHHHHHHhhhc-HHHHHHHHHHHHHHHHHHHHHHhhcCC---C
Q 047983 68 NGILQDLGVAFFHSISLNMRMDDY---LLLSESVYTTVGAVPQILEKT-EEEFFSKITDILREAADICCDRLKEIP---C 140 (233)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~---~ 140 (233)
+.+++. +. ...... ...+++...| .++..++++. ..++.++.+..+++|++.+.+.|++.+ +
T Consensus 249 ~~l~~~--~~--------~~~~~~~~~~~~~~s~~~q-~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~ 317 (388)
T PRK08637 249 QTVKEA--LE--------KKVKGLIRSNISNGPHPSQ-SAVLRALNSPEFDKEKQEKFQILKERYEKTKEVLYDGKYDDA 317 (388)
T ss_pred HHHHHH--HH--------HHHHHHhhcccCCCCcHHH-HHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCC
Confidence 233321 11 111111 1122333333 5556666543 446778888899999999999997642 3
Q ss_pred cccccCCCccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec-CHHHHHHHH
Q 047983 141 ITCPKKPEGSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV-EPSAFEIGL 219 (233)
Q Consensus 141 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~-~~~~l~~~~ 219 (233)
+. +.+|+||+|+| ++++ . . ++.+++.++++++||.+.+. ..+|+||+++. +.+++++++
T Consensus 318 ~~-~~~~~~g~~~~---------~~l~--~---~-~~~~l~~~l~~~~gv~~~~~----~~~~iRi~~~~~~~~~i~~~~ 377 (388)
T PRK08637 318 WQ-AYPFNSGYFMC---------LKLK--G---V-DAEELRVHLLEKYGIGTIAL----NETDLRIAFSCVEEEDIPELF 377 (388)
T ss_pred cc-cccccceEEEE---------ecCC--h---H-HHHHHHHHHhhhcceEEEec----cCCceEEEeecCCHHHHHHHH
Confidence 44 46889999999 6554 1 1 35677777778889998752 35799999997 899999999
Q ss_pred HHHHHHHHHH
Q 047983 220 GRMKAFYYRH 229 (233)
Q Consensus 220 ~~l~~~l~~~ 229 (233)
++|.++++..
T Consensus 378 ~~l~~~~~~~ 387 (388)
T PRK08637 378 DSIYKAIKDL 387 (388)
T ss_pred HHHHHHHHhc
Confidence 9999998754
No 80
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.91 E-value=2.8e-23 Score=178.29 Aligned_cols=177 Identities=14% Similarity=0.144 Sum_probs=121.9
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHS 81 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~ 81 (233)
+|+++|++++++||+||+|.++.. ..++..+...+++|+++||||.|++||+|+||+++++ +++
T Consensus 148 ~l~~~~~~~~~~iI~DE~y~~~~~----~~s~~~~~~~~~vi~~~SfSK~~gl~GlRiG~~v~~~--~l~---------- 211 (330)
T PRK05664 148 AWHARLAARGGWLVVDEAFMDNTP----QHSLAACAHRPGLIVLRSFGKFFGLAGARLGFVLAEP--ALL---------- 211 (330)
T ss_pred HHHHHHHhcCCEEEEECCcccCCC----cccccccccCCCEEEEeeccccccCCCcceEEEEeCH--HHH----------
Confidence 678889999999999999987641 1244445556789999999999999999999999987 344
Q ss_pred hhhHHhhhhhh-hhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCcc--EEEEEecC
Q 047983 82 ISLNMRMDDYL-LLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGS--MFVMYCGS 158 (233)
Q Consensus 82 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g--~~~~~~~~ 158 (233)
..+.... .++.+...+ .+...++.+ ..+.++.++.++++++.+.+.|+++ ++ .|.+| +|+|
T Consensus 212 ----~~~~~~~~~~~~~~~~~-~~~~~~L~~--~~~~~~~~~~~~~~r~~l~~~L~~~-~~----~~~~~~~~f~~---- 275 (330)
T PRK05664 212 ----RALAELLGPWTVSGPTR-WLAQAALAD--TPWQRRQRERLLAASQRLAALLRRH-GL----TPAGGCALFQW---- 275 (330)
T ss_pred ----HHHHHhcCCCCCCHHHH-HHHHHHHhC--hHHHHHHHHHHHHHHHHHHHHHHHC-CC----cccCCcceEEE----
Confidence 3333322 123333333 444444432 3556788999999999999999887 33 24445 7888
Q ss_pred CCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeecCHHHHHHHHHHHHHHHH
Q 047983 159 EDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAVEPSAFEIGLGRMKAFYY 227 (233)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~~~~~l~~~~~~l~~~l~ 227 (233)
++.+ ++. .+.+.|+++||.|.+ |+..+++||+++.+.++.++..+.|+++.+
T Consensus 276 -------~~~~------~~~-~~~~~l~~~gi~v~~---f~~~~~iRis~~~~~~~~~~l~~al~~~~~ 327 (330)
T PRK05664 276 -------VRTE------DAA-ALHEFLARRGILTRL---FEQPASLRFGLPADEADWARLDQALLAYRK 327 (330)
T ss_pred -------EecC------CHH-HHHHHHHHCCeEEEE---CCCCCeEEEECCCCHHHHHHHHHHHHHHHh
Confidence 4432 244 445556788999974 555689999999644455555555554443
No 81
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.91 E-value=4.2e-23 Score=180.35 Aligned_cols=194 Identities=16% Similarity=0.239 Sum_probs=137.5
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHS 81 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~ 81 (233)
+|+++|+++|+++|+||+|.+|..+. .+...++ .++++++.||||.|+++|+|+||+++++ ++++
T Consensus 181 ~i~~~a~~~~~~ii~De~y~~~~~~~---~~~~~~~-~~~~i~~~s~SK~~g~~G~RiG~i~~~~--~l~~--------- 245 (380)
T PRK06225 181 EFAEIARDNDAFLLHDCTYRDFAREH---TLAAEYA-PEHTVTSYSFSKIFGMAGLRIGAVVATP--DLIE--------- 245 (380)
T ss_pred HHHHHHHHCCcEEEEehhHHHHhccC---CchhhcC-CCCEEEEeechhhcCCccceeEEEecCH--HHHH---------
Confidence 68899999999999999999876432 1222233 3789999999999999999999999987 4443
Q ss_pred hhhHHhhhhhh--hhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCC
Q 047983 82 ISLNMRMDDYL--LLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSE 159 (233)
Q Consensus 82 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~ 159 (233)
.+.... ..+.+...+ .+....+. ...++.++.++.++++++.+.+.|+++++......|.+|+|+|
T Consensus 246 -----~~~~~~~~~~~~~~~~~-~~a~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~----- 313 (380)
T PRK06225 246 -----VVKSIVINDLGTNVIAQ-EAAIAGLK-VKDEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYPSHGNMMV----- 313 (380)
T ss_pred -----HHHHHHhcccCCCHHHH-HHHHHHHh-cchHHHHHHHHHHHHHHHHHHHHHHhCcCCccccCCCCCeEEE-----
Confidence 222221 223333232 33333332 2356778888889999999999998865543223566788889
Q ss_pred CcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC---CCcEEEEeecCHHHHHHHHHHHHHHHHHHhh
Q 047983 160 DKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL---KDWLRITFAVEPSAFEIGLGRMKAFYYRHAK 231 (233)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~---~~~~Rl~~~~~~~~l~~~~~~l~~~l~~~~~ 231 (233)
+.++.. +. ++.++..++ .++||.+.||..|+. .+++|++++.+++++++++++|.+++++.+.
T Consensus 314 ----~~~~~~---~~-~~~~l~~~l-~~~gi~v~~g~~~~~~~~~~~iR~s~~~~~e~l~~~~~~l~~~~~~~~~ 379 (380)
T PRK06225 314 ----IDISEA---GI-DPEDLVEYL-LERKIFVRQGTYTSKRFGDRYIRVSFSIPREQVEVFCEEFPDVVETLRT 379 (380)
T ss_pred ----EEcccc---cC-CHHHHHHHH-HHCCEEEcCCcccCcCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHhhc
Confidence 555321 11 345555554 588999999987753 4699999998889999999999999987653
No 82
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.91 E-value=5.6e-23 Score=177.08 Aligned_cols=181 Identities=12% Similarity=0.110 Sum_probs=127.4
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHS 81 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~ 81 (233)
+|++.|+++++++|+||+|.+|... .++..+...+++|+++||||.|++||+|+||+++++ +++
T Consensus 154 ~l~~~~~~~~~~vI~DEay~~~~~~----~s~~~~~~~~~vi~l~SfSK~~gl~GlRiGy~v~~~--~li---------- 217 (339)
T PRK06959 154 RWHAQLAARGGTLIVDEAFADTLPA----ASLAAHTDRPGLVVLRSVGKFFGLAGVRAGFVLAAP--ALL---------- 217 (339)
T ss_pred HHHHHHHHcCCEEEEECCCccCCCc----ccchhccCCCCEEEEecChhhcCCcchheEEEecCH--HHH----------
Confidence 4566677889999999999998643 233333334789999999999999999999999987 444
Q ss_pred hhhHHhhhhhh-hhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCCC
Q 047983 82 ISLNMRMDDYL-LLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSED 160 (233)
Q Consensus 82 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~ 160 (233)
..+.... .++.+...| .+..++++ ..++.++.++.++++++.+.+.|+++ ++.. . .+++|+|
T Consensus 218 ----~~l~~~~~~~~vs~~~q-~a~~~~L~--~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~--~-~~~~f~~------ 280 (339)
T PRK06959 218 ----AALRDALGAWTVSGPAR-HAVRAAFA--DAAWQAAMRERLAADGARLAALLRAH-GFAV--H-ATPLFSW------ 280 (339)
T ss_pred ----HHHHHhcCCCCCcHHHH-HHHHHHhC--cHHHHHHHHHHHHHHHHHHHHHHHHC-CCCc--c-CcceEEE------
Confidence 3333322 233333344 44445443 34677889999999999999999987 4543 2 3689999
Q ss_pred cccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeecCHHHHHHHHHHHHHHHHHHh
Q 047983 161 KCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAVEPSAFEIGLGRMKAFYYRHA 230 (233)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~~~~~l~~~~~~l~~~l~~~~ 230 (233)
++++ +..+ +...|.++||.|++ |+..+|+||+++.+.++.+..++.|+++++...
T Consensus 281 ---~~~~--------~~~~-l~~~l~~~GI~vr~---~~~~~~lRisi~~~~~e~~~l~~al~~~~~~~~ 335 (339)
T PRK06959 281 ---TDDP--------RAAA-LHAALARRGIWTRY---FAPPPSVRFGLPADEAEWQRLEDALAECVPTLA 335 (339)
T ss_pred ---EeCC--------CHHH-HHHHHHhCCeEEEE---CCCCCeEEEECCCCHHHHHHHHHHHHHHHHHHh
Confidence 4432 1334 45556678999974 455679999996555566777777777766554
No 83
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.91 E-value=7.2e-23 Score=166.91 Aligned_cols=197 Identities=20% Similarity=0.243 Sum_probs=144.9
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHS 81 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~ 81 (233)
+|.++|++||+++|.|.+|+. .|++-.+..+ .+...+|+|.|.|+||. |+||.|+|-+++.+ +++
T Consensus 203 kldalA~~~giPliIDnAYg~-PFP~iifsd~-~~~w~~NiilC~SLSK~-GLPG~R~GIiIane--------~vi---- 267 (417)
T COG3977 203 KLDALARQHGIPLIIDNAYGV-PFPGIIFSDA-TPLWNENIILCMSLSKL-GLPGSRCGIIIANE--------KVI---- 267 (417)
T ss_pred HHHHHhhhcCCcEEEecccCC-CCCceecccc-cccCCCCEEEEeehhhc-CCCCcceeEEEccH--------HHH----
Confidence 467889999999999999985 2223222222 13457899999999999 99999999999987 444
Q ss_pred hhhHHhhhhhhhh-ccCcchHH-HHHHHHhhhcHHHH--HHHHHHHHHHHHHHHHHHhhc-CCCcc-cccCCCccEEEEE
Q 047983 82 ISLNMRMDDYLLL-SESVYTTV-GAVPQILEKTEEEF--FSKITDILREAADICCDRLKE-IPCIT-CPKKPEGSMFVMY 155 (233)
Q Consensus 82 ~~~~~~~~~~~~~-~~~~~~~~-~~~~~~l~~~~~~~--~~~~~~~~~~~~~~l~~~L~~-~~~~~-~~~~~~~g~~~~~ 155 (233)
..+.++... +..+.... +..+.+++++.-.. -+-++..|+++.+...+.|++ ++... ..++|+|++|+|
T Consensus 268 ----qaitnmn~iisLap~~~G~Aia~~mie~gdl~rlseqVIrPFY~~~~q~~~~~l~~~lp~~~~~iHkpEGAIFlW- 342 (417)
T COG3977 268 ----QAITNMNGIISLAPGRMGPAIAAEMIESGDLLRLSEQVIRPFYRNRVQTTIAILRRYLPEYRCLIHKPEGAIFLW- 342 (417)
T ss_pred ----HHHHhccceeeecCCCccHHHHHHHhhcchHHHHHHHhhhHHHHHHHHHHHHHHHHhcCccceeeecCCcceeeh-
Confidence 444444442 22222222 66667776653322 234678888888888888877 55322 137899999999
Q ss_pred ecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC---------CCcEEEEeecCHHHHHHHHHHHHHHH
Q 047983 156 CGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL---------KDWLRITFAVEPSAFEIGLGRMKAFY 226 (233)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~---------~~~~Rl~~~~~~~~l~~~~~~l~~~l 226 (233)
+++..- ++ +...+++.|+..||+++||+.|.+ ..++|+++..+++.++.++++|.+.+
T Consensus 343 --------LWf~dL---PI--tt~~LYq~LKa~Gvl~VPG~~FFpGl~~ewpH~hqC~Rmn~~~~~~~ie~Gva~lae~v 409 (417)
T COG3977 343 --------LWFKDL---PI--TTEELYQRLKARGVLMVPGHYFFPGLDKEWPHTHQCMRMNYVPEPEKIEKGVAILAEEV 409 (417)
T ss_pred --------hhhccC---CC--CHHHHHHHHHhCeEEEecccccCCCCCCCCCCccceEEEecCCCHHHHHHHHHHHHHHH
Confidence 665321 22 788889999999999999999964 47899999999999999999999998
Q ss_pred HHHhh
Q 047983 227 YRHAK 231 (233)
Q Consensus 227 ~~~~~ 231 (233)
++.-+
T Consensus 410 e~~yq 414 (417)
T COG3977 410 ERAYQ 414 (417)
T ss_pred HHHHh
Confidence 87643
No 84
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=99.91 E-value=7.9e-23 Score=172.58 Aligned_cols=200 Identities=21% Similarity=0.348 Sum_probs=154.8
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccC-----CccCEEEEccCccccCCCCceEEEEEecCCCccccccch
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFG-----SIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGV 76 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~-----~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~ 76 (233)
.++++|.++|++||+||+|..-+|+..++.++..+. ..+++-.+.|+||-+|+||+|+|.|...++ .+
T Consensus 250 ~ll~Fa~~kniHvI~DEIya~sVF~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~ne-------~V 322 (471)
T KOG0256|consen 250 SLLNFASRKNIHVISDEIYAGSVFDKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNE-------DV 322 (471)
T ss_pred HHHHHHhhcceEEEeehhhcccccCccCceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecCh-------HH
Confidence 478899999999999999999999998887776542 346799999999999999999999999884 22
Q ss_pred hhhhhhhhHHhhhhhhhhccCcchHH-HHHHHHhhhc--HHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEE
Q 047983 77 AFFHSISLNMRMDDYLLLSESVYTTV-GAVPQILEKT--EEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFV 153 (233)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~ 153 (233)
+ ...+.+..+. ..+++. ..++++|.+. .++++.+.+++++.+..++.+.|+++ ++.+ .+.++|.|+
T Consensus 323 v--------saA~kmssf~-~vSs~tQ~~la~LLSD~~f~~~yl~en~~Rl~~rh~~~~~gLk~l-gI~c-l~s~AGlF~ 391 (471)
T KOG0256|consen 323 V--------SAATKMSSFG-LVSSQTQYLLASLLSDEEFTREYLRENNKRLRIRHRYIVEGLKAL-GIPC-LKSNAGLFC 391 (471)
T ss_pred H--------HHHHHHhhcc-CCcHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHhhHHhc-CCce-eecCCeeEE
Confidence 3 3334333332 223333 8888888775 35899999999999999999999998 7776 789999999
Q ss_pred EEecCCCcccccccccccCC---CCChHHHHHHHHhccCEEEECCcccCC--CCcEEEEeec-CHHHHHHHHHHHHHHHH
Q 047983 154 MYCGSEDKCLLKLNYSLLEG---INSDTEFALKLAKEESIIVLPGITVGL--KDWLRITFAV-EPSAFEIGLGRMKAFYY 227 (233)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~~Rl~~~~-~~~~l~~~~~~l~~~l~ 227 (233)
| ++.+.+.. .+...+.-.+++.+-++.+.||+.|.- .+|+|+||+. .++.++-+|+||++++.
T Consensus 392 w-----------vDlr~lL~s~tfe~El~Lw~~i~~~vklnlSpG~s~~C~EpGWFRvcFAn~~~~t~~~am~Ri~~~~~ 460 (471)
T KOG0256|consen 392 W-----------VDLRKLLTSLTFEGELELWERILDNVKLNLSPGSSCHCHEPGWFRVCFANMSEETLEVAMRRLKQFLD 460 (471)
T ss_pred E-----------EEhHHhcCcCChHHHHHHHHHHHHhhccccCCCCcceecCCCeEEEEeccCCHHHHHHHHHHHHHHHH
Confidence 9 65554321 112334455666666999999999975 6999999998 55555559999999987
Q ss_pred HHh
Q 047983 228 RHA 230 (233)
Q Consensus 228 ~~~ 230 (233)
...
T Consensus 461 ~~~ 463 (471)
T KOG0256|consen 461 SQV 463 (471)
T ss_pred hhh
Confidence 543
No 85
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.90 E-value=9.1e-23 Score=177.34 Aligned_cols=188 Identities=19% Similarity=0.250 Sum_probs=133.9
Q ss_pred hHHHHHHHc--CcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 2 CIEETTKKL--GIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 2 ~i~~l~~~~--~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
+|.++|+.+ |+++|+||+|.++.+++....++..++..+++|+++|+||.|+++|+|+||+++++ ++++
T Consensus 175 ~l~~l~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~~--~~~~------- 245 (367)
T PRK02731 175 EVERFLAGVPPDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNVVVTRTFSKAYGLAGLRVGYGIAPP--EIID------- 245 (367)
T ss_pred HHHHHHHhCCCCcEEEEECcHHHhccCcCcccHHHHHhhcCCEEEEeeehHhhcCcccceeeeeCCH--HHHH-------
Confidence 566777664 99999999999988765433344334455789999999999999999999999987 3442
Q ss_pred hhhhhHHhhhhhh-hhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecC
Q 047983 80 HSISLNMRMDDYL-LLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGS 158 (233)
Q Consensus 80 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~ 158 (233)
.+.... .++.+..++ .+..++++ ..++.++.++.++++++.+.+.|++. ++.. . |.+|+|+|
T Consensus 246 -------~l~~~~~~~~~~~~~~-~~a~~~l~--~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~-~~~g~~~~---- 308 (367)
T PRK02731 246 -------ALNRVRQPFNVNSLAL-AAAVAALD--DDAFVEKSRALNAEGMAWLTEFLAEL-GLEY-I-PSVGNFIL---- 308 (367)
T ss_pred -------HHHHccCCCCCCHHHH-HHHHHHhC--CHHHHHHHHHHHHHHHHHHHHHHHHC-CCcc-C-CCCceEEE----
Confidence 222221 123333333 44444443 25678889999999999999999887 5543 3 55789999
Q ss_pred CCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeecCHHHHHHHHHHHHHHHH
Q 047983 159 EDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAVEPSAFEIGLGRMKAFYY 227 (233)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~~~~~l~~~~~~l~~~l~ 227 (233)
++++.. . ++.++.. .|.++||.|.|+..|+..+++|++++. .++++..++.|.++++
T Consensus 309 -----i~~~~~----~-~~~~~~~-~L~~~gI~v~~~~~~~~~~~iRis~~~-~~e~~~l~~aL~~~~~ 365 (367)
T PRK02731 309 -----VDFDDG----K-DAAEAYQ-ALLKRGVIVRPVAGYGLPNALRITIGT-EEENRRFLAALKEFLA 365 (367)
T ss_pred -----EECCCC----C-CHHHHHH-HHHHCCEEEEeCCCCCCCCeEEEecCC-HHHHHHHHHHHHHHHh
Confidence 555321 1 3445544 556789999999988767899999984 5567888888887764
No 86
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.90 E-value=4.3e-23 Score=179.85 Aligned_cols=182 Identities=18% Similarity=0.309 Sum_probs=122.5
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccC-CccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFG-SIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
+|+++|+ .+++||+||+|.+|.+++..+..+..+. ..+++|+++||||.|++||+|+||++++++ .+.
T Consensus 183 ~l~~~~~-~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~~~-~l~--------- 251 (371)
T PRK05166 183 RVLDATP-PETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVSDP-ELV--------- 251 (371)
T ss_pred HHHHhCC-CCcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecCCH-HHH---------
Confidence 4555554 4889999999999996543332232233 346899999999999999999999887552 233
Q ss_pred hhhhHHhhhhhh-hhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCC
Q 047983 81 SISLNMRMDDYL-LLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSE 159 (233)
Q Consensus 81 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~ 159 (233)
..+.... .++.+...+..+.+.+ . ..+++++.++.++++++.+.+.|++. ++. ..|.+|+|+|
T Consensus 252 -----~~~~~~~~~~~~~~~~q~~~~~~l-~--~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~--~~p~~g~fl~----- 315 (371)
T PRK05166 252 -----GLLDRVRTPFNVNGAAQAAALAAL-D--DEEHLAKGVALALAERERLKKELAEM-GYR--IAPSRANFLF----- 315 (371)
T ss_pred -----HHHHHhccCCCCCHHHHHHHHHHh-c--CHHHHHHHHHHHHHHHHHHHHHHHHC-cCe--eCCCcCCEEE-----
Confidence 2222211 2333333332444444 2 24678888999999999999999887 554 2466789999
Q ss_pred CcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeecC--HHHHHHHHHHH
Q 047983 160 DKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAVE--PSAFEIGLGRM 222 (233)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~~--~~~l~~~~~~l 222 (233)
++++ . ++.++...++ ++||.+.||..++..+|+|++++.+ .+.+.++++++
T Consensus 316 ----~~~~--~-----~~~~l~~~l~-~~gi~v~p~~~~~~~~~iRi~~~~~~~~~~l~~~l~~i 368 (371)
T PRK05166 316 ----FDAR--R-----PASAVAEALL-RQGVIVKPWKQPGFETFIRVSIGSPEENDHFVAALDKV 368 (371)
T ss_pred ----EeCC--C-----CHHHHHHHHH-HCCeEEecCCCCCCCCeEEEEcCCHHHHHHHHHHHHHH
Confidence 5432 1 3555655555 5699999998877789999999973 34555555443
No 87
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.90 E-value=7.5e-23 Score=175.67 Aligned_cols=177 Identities=13% Similarity=0.169 Sum_probs=127.7
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCcccccccc-CCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVF-GSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
+|+++|+++|++||+||+|.++.+.. ++... +..+++|+++|+||.|++||+|+||+++++ +++
T Consensus 149 ~l~~~a~~~~~~ii~De~y~~~~~~~----~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~--~~~--------- 213 (330)
T TIGR01140 149 ALAARLRARGGWLVVDEAFIDFTPDA----SLAPQAARFPGLVVLRSLTKFFGLAGLRLGFVVAHP--ALL--------- 213 (330)
T ss_pred HHHHHhHhcCCEEEEECcccccCCcc----chhhHhccCCCEEEEEecchhhcCchhhhhheeCCH--HHH---------
Confidence 67899999999999999999987542 23222 345789999999999999999999999987 333
Q ss_pred hhhhHHhhhhhhh-hccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCC
Q 047983 81 SISLNMRMDDYLL-LSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSE 159 (233)
Q Consensus 81 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~ 159 (233)
..+..+.. ++.+..++ .++.++++ ..++.+..++.++++++.+.+.|++++.+. ..|.+|+|+|
T Consensus 214 -----~~l~~~~~~~~~s~~~q-~~~~~~l~--~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~--~~~~~~~f~~----- 278 (330)
T TIGR01140 214 -----ARLREALGPWTVNGPAR-AAGRAALA--DTAWQAATRARLAAERARLAALLARLGGLE--VVGGTALFLL----- 278 (330)
T ss_pred -----HHHHhcCCCCCchHHHH-HHHHHHHh--chHHHHHHHHHHHHHHHHHHHHHHhCCCce--ECCCCCeEEE-----
Confidence 33333322 22222232 55566654 235667889999999999999999986553 3456899999
Q ss_pred CcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC--CCcEEEEeecCHHHHHHHHHHH
Q 047983 160 DKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL--KDWLRITFAVEPSAFEIGLGRM 222 (233)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~~Rl~~~~~~~~l~~~~~~l 222 (233)
++++ ++.++..++ .++||.+.||+.|+. .+++|+++++..++ +..+++|
T Consensus 279 ----~~~~--------~~~~l~~~l-~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~-~~~~~~l 329 (330)
T TIGR01140 279 ----VRTP--------DAAALHEAL-ARRGILIRDFDNFPGLDPRYLRFALPTDEEN-DRLEEAL 329 (330)
T ss_pred ----EEcC--------CHHHHHHHH-HHCCEEEEECCCCCCCCCCEEEEEecCHHHH-HHHHHhh
Confidence 4433 245555555 467999999999963 57999999986554 5555544
No 88
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.90 E-value=9.2e-23 Score=178.33 Aligned_cols=171 Identities=20% Similarity=0.254 Sum_probs=121.1
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
+++.++++.. ++||+||+|.+|.+.+. ....+...+++|+++||||.|+++|+|+||+++++ +++
T Consensus 195 ~~l~~l~~~~-~~vi~DeaY~~~~~~~~---~~~~~~~~~~viv~~SfSK~~glaGlRiGy~~~~~--~~i--------- 259 (380)
T PLN03026 195 DDLLKILELP-ILVVLDEAYIEFSTQES---RMKWVKKYDNLIVLRTFSKRAGLAGLRVGYGAFPL--SII--------- 259 (380)
T ss_pred HHHHHHHhcC-CEEEEECcchhhcCCcc---hHHHHHhCCCEEEEecchHhhcCccccceeeecCH--HHH---------
Confidence 3567777654 99999999999876432 12223456899999999999999999999999987 344
Q ss_pred hhhhHHhhhhhh-hhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCC
Q 047983 81 SISLNMRMDDYL-LLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSE 159 (233)
Q Consensus 81 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~ 159 (233)
..+.... .++.+...+..+.+. ++ ..+++++.++.++++++.+.+.|++++... ..|.+++|+|
T Consensus 260 -----~~l~~~~~~~~~~~~~q~aa~~a-L~--~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~--~~p~~~~f~~----- 324 (380)
T PLN03026 260 -----EYLWRAKQPYNVSVAAEVAACAA-LS--NPKYLEDVKNALVEERERLFGLLKEVPFLE--PYPSDANFIL----- 324 (380)
T ss_pred -----HHHHHhcCCCCCCHHHHHHHHHH-hh--CHHHHHHHHHHHHHHHHHHHHHHHHCCCCe--ECCCCCeEEE-----
Confidence 3332221 133333344344444 43 246788999999999999999999885443 3678899999
Q ss_pred CcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeecC
Q 047983 160 DKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAVE 211 (233)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~~ 211 (233)
++++. +. ++.++...++ ++||.|++++.++..+|+|||++.+
T Consensus 325 ----~~~~~----~~-~~~~~~~~l~-~~gI~v~~~~~~~~~~~lRis~~~~ 366 (380)
T PLN03026 325 ----CRVTS----GR-DAKKLKEDLA-KMGVMVRHYNSKELKGYIRVSVGKP 366 (380)
T ss_pred ----EECCC----CC-CHHHHHHHHH-HCCeEEEECCCCCCCCEEEEecCCH
Confidence 55432 11 3455555555 8899999987765678999999963
No 89
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.89 E-value=1.5e-22 Score=176.65 Aligned_cols=180 Identities=20% Similarity=0.280 Sum_probs=123.2
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHS 81 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~ 81 (233)
+|+++| +|++||+||+|.+|.+.. .+..+...+++|+++||||.||+||+|+||+++++ .++
T Consensus 192 ~l~~~~--~~~~iI~De~Y~~~~~~~----~~~~~~~~~~~ivi~SfSK~~g~~GlRiG~~v~~~--~l~---------- 253 (374)
T PRK02610 192 WLRSLP--EDILVVIDEAYFEFSQTT----LVGELAQHPNWVILRTFSKAFRLAAHRVGYAIGHP--ELI---------- 253 (374)
T ss_pred HHHhcc--CCcEEEEeccccccCccc----hHHHHhcCCCEEEEEecchhccCcccceeeeecCH--HHH----------
Confidence 344544 489999999999986321 22333445688999999999999999999999976 344
Q ss_pred hhhHHhhhhhh-hhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCCC
Q 047983 82 ISLNMRMDDYL-LLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSED 160 (233)
Q Consensus 82 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~ 160 (233)
..+.... .++.+...| .+....++ ..+.+.+.+++.+++ ++.+.+.|+.++++. ..|++|+|+|
T Consensus 254 ----~~l~~~~~~~~~~~~~q-~a~~~~l~-~~~~~~~~~~~~~~~-r~~l~~~L~~~~~~~--~~p~~g~f~~------ 318 (374)
T PRK02610 254 ----AVLEKVRLPYNLPSFSQ-LAAQLALE-HRQELLAAIPEILQE-RDRLYQALQELPQLR--VWPSAANFLY------ 318 (374)
T ss_pred ----HHHHHhcCCCCCCHHHH-HHHHHHhc-CHHHHHHHHHHHHHH-HHHHHHHHHhCCCcE--eCCCcceEEE------
Confidence 3332221 233333344 33444443 345667776766655 677888998776664 3588999999
Q ss_pred cccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeecCHHHHHHHHHHHHHHHHHH
Q 047983 161 KCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAVEPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~~~~~l~~~~~~l~~~l~~~ 229 (233)
++++.. . ++.++ .+.|+++||.|.++ ++++||+++.+ +++++++++|.+++...
T Consensus 319 ---~~l~~~----~-~~~~~-~~~l~~~gi~v~~~-----~~~lRls~~~~-~~~~~~l~~l~~~l~~~ 372 (374)
T PRK02610 319 ---LRLSQD----A-ALAAL-HQALKAQGTLVRHT-----GGGLRITIGTP-EENQRTLERLQAALTQL 372 (374)
T ss_pred ---EeCCCC----C-CHHHH-HHHHHHCCEEEEeC-----CCeEEEeCCCH-HHHHHHHHHHHHHHhhc
Confidence 666421 1 24444 45567889999874 37999999965 45799999999988654
No 90
>PRK08354 putative aminotransferase; Provisional
Probab=99.89 E-value=5.8e-22 Score=168.86 Aligned_cols=167 Identities=15% Similarity=0.206 Sum_probs=111.1
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|+++|+++|++||+||+|.+|.+++.. . ..+++|+++||||.|++||+|+||+++.. +.+
T Consensus 140 ~~l~~~a~~~~~~li~De~y~~f~~~~~~---~----~~~~vi~~~S~SK~~~l~GlRiG~~v~~~--------~~l--- 201 (311)
T PRK08354 140 KPLLDAVEDRNALLILDEAFIDFVKKPES---P----EGENIIKLRTFTKSYGLPGIRVGYVKGFE--------EAF--- 201 (311)
T ss_pred HHHHHHhhhcCcEEEEeCcchhccccccc---c----CCCcEEEEeccHhhcCCccceeeeeeehH--------HHH---
Confidence 36889999999999999999999886521 1 15789999999999999999999999832 122
Q ss_pred hhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCCC
Q 047983 81 SISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSED 160 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~ 160 (233)
...+.. +..+...+ .++..+++ ...+++.+.++.++++++.+.+.+ ..+|+|+++++
T Consensus 202 -----~~~~~~--~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~l--------~~~~~~~~~~~------ 258 (311)
T PRK08354 202 -----RSVRMP--WSIGSTGY-AFLEFLIE-DDFEHLRKTMPLIWREKERFEKAL--------YVKSDANFFIK------ 258 (311)
T ss_pred -----HHcCCC--ccCCHHHH-HHHHHHHH-hHHHHHHHHHHHHHHHHHHHHHhc--------CCCCCCcEEEE------
Confidence 222221 22222222 44555554 333566666677776666654443 13566665554
Q ss_pred cccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeecCH--HHHHHHHHH
Q 047983 161 KCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAVEP--SAFEIGLGR 221 (233)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~~~--~~l~~~~~~ 221 (233)
+.+ ++.++.. .|+++||.|.||+.|+.++|+||+++.++ +.+.++++.
T Consensus 259 ------~~~------~~~~~~~-~l~~~gv~v~~g~~f~~~~~iRi~~~~~~~~~~l~~al~~ 308 (311)
T PRK08354 259 ------DVG------DAEKFVE-FLKRNGILVRDCTSFGLPGYIRFSVRDREENEKLIRALRE 308 (311)
T ss_pred ------ECC------CHHHHHH-HHHHCCeEEEecccCCCCCeEEEEeCCHHHHHHHHHHHHH
Confidence 322 2445554 45678999999999987799999999743 444444443
No 91
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.88 E-value=1.5e-22 Score=176.17 Aligned_cols=182 Identities=16% Similarity=0.230 Sum_probs=126.2
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHS 81 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~ 81 (233)
+|+++|++++ ++|+||+|.+|.+++.....+..++..+++|+++||||.|++||+|+||+++++ +++
T Consensus 175 ~l~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~~~--~~~---------- 241 (366)
T PRK01533 175 QFIEGISENT-LIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVGHE--ELI---------- 241 (366)
T ss_pred HHHHhCCCCC-EEEEEccHHHhhccccCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhCCH--HHH----------
Confidence 5667777766 567799999988764323333344556899999999999999999999999986 344
Q ss_pred hhhHHhhhhhh-hhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCCC
Q 047983 82 ISLNMRMDDYL-LLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSED 160 (233)
Q Consensus 82 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~ 160 (233)
..+.... .++.+...+ .+...+++ ..++.+..++.++++++.+.+.++.+ ++.. .+| +|.|+|
T Consensus 242 ----~~l~~~~~~~~~~~~~q-~aa~~~l~--~~~~~~~~~~~~~~~r~~~~~~l~~~-g~~~-~~~-~~nf~~------ 305 (366)
T PRK01533 242 ----EKLNVVRLPFNVSSLAQ-KAATIAFG--DDEFIEEIVRVNTEGLRQYESFCKEN-EIPF-YQS-QTNFIF------ 305 (366)
T ss_pred ----HHHHHhcCCCCcCHHHH-HHHHHHhC--CHHHHHHHHHHHHHHHHHHHHHHHhC-CCcc-CCC-cCcEEE------
Confidence 3333222 233333343 44444443 35788888899999999999999887 5543 455 577899
Q ss_pred cccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeecCHHHHHHHHHHHHHHHHHHh
Q 047983 161 KCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAVEPSAFEIGLGRMKAFYYRHA 230 (233)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~~~~~l~~~~~~l~~~l~~~~ 230 (233)
++++ ++.+ +...|.++||.|++ | .+|+||+++..+ +.+..++.|+++++..+
T Consensus 306 ---~~~~--------~~~~-~~~~l~~~GI~Vr~---~--~~~iRis~~~~~-~~~~l~~al~~~~~~~~ 357 (366)
T PRK01533 306 ---LPVE--------NGGE-IYEACAHAGFIIRP---F--PNGVRITVGTRE-QNEGVISVLQQHFENKK 357 (366)
T ss_pred ---EeCC--------CHHH-HHHHHHHCCcEEcc---C--CCceEEeCCCHH-HHHHHHHHHHHHHHhcc
Confidence 5443 1334 45666689999998 4 489999999654 45777888877766554
No 92
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.88 E-value=1.6e-21 Score=169.81 Aligned_cols=187 Identities=15% Similarity=0.222 Sum_probs=129.2
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHS 81 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~ 81 (233)
+|++.|+ ++++||+||+|.++.+++. ..++.. ..+++|+++||||.|++||+|+||+++++ ++++
T Consensus 179 ~l~~~~~-~~~~lI~DE~y~~~~~~~~-~~~~~~--~~~~~i~~~SfSK~~g~~GlRiG~~v~~~--~~~~--------- 243 (369)
T PRK08153 179 AFIEALP-ETTLLVLDEAYCETAPAGA-APPIDT--DDPNVIRMRTFSKAYGLAGARVGYAIGAP--GTIK--------- 243 (369)
T ss_pred HHHHhCC-CCcEEEEeCchhhhcCccc-chhhhh--cCCCEEEEecchHhccCcchheeeeecCH--HHHH---------
Confidence 3445554 3899999999999987652 223321 34689999999999999999999999987 4443
Q ss_pred hhhHHhhhhhh-hhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCCC
Q 047983 82 ISLNMRMDDYL-LLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSED 160 (233)
Q Consensus 82 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~ 160 (233)
.+.... .++.++..+ .+...+++ ..+++++.++.++++++.+.+.|++. ++. ..|.+++|+|
T Consensus 244 -----~l~~~~~~~~~s~~~q-~~~~~~l~--~~~~~~~~~~~~~~~r~~~~~~L~~~-g~~--~~p~~~~f~~------ 306 (369)
T PRK08153 244 -----AFDKVRNHFGMNRIAQ-AAALAALK--DQAYLAEVVGKIAAARDRIAAIARAN-GLT--PLPSATNFVA------ 306 (369)
T ss_pred -----HHHHhhcCCCCCHHHH-HHHHHHhc--CHHHHHHHHHHHHHHHHHHHHHHHHC-CCc--cCCCcCcEEE------
Confidence 222211 233333333 44445553 35678899999999999999999887 443 3477899999
Q ss_pred cccccccccccCCCCChHHHHHHHHhccCEEEE-CCcccCCCCcEEEEeecCHHHHHHHHHHHHHHHHHHh
Q 047983 161 KCLLKLNYSLLEGINSDTEFALKLAKEESIIVL-PGITVGLKDWLRITFAVEPSAFEIGLGRMKAFYYRHA 230 (233)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~-pg~~f~~~~~~Rl~~~~~~~~l~~~~~~l~~~l~~~~ 230 (233)
++++... .....+.+.|.++||.+. ||.. ...+|+|++++ ++++.+..++.|.+++....
T Consensus 307 ---~~~~~~~-----~~a~~l~~~l~~~Gi~v~~p~~~-~~~~~iRis~~-~~~~~~~~~~al~~~~~~~~ 367 (369)
T PRK08153 307 ---IDCGRDG-----AFARAVLDGLIARDIFVRMPGVA-PLDRCIRVSCG-PDEELDLFAEALPEALEAAR 367 (369)
T ss_pred ---EECCCCc-----ccHHHHHHHHHHCCeEEeeCCCC-CCCCeEEEecC-CHHHHHHHHHHHHHHHHHhh
Confidence 4443111 134455555667899995 6643 23579999999 56678899999988886544
No 93
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.88 E-value=1.6e-22 Score=174.98 Aligned_cols=179 Identities=18% Similarity=0.235 Sum_probs=120.7
Q ss_pred HHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhhhh
Q 047983 3 IEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHSI 82 (233)
Q Consensus 3 i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~~ 82 (233)
|++.|++ +++||+||+|.+|.... .....+...+++|+++||||.||+||+|+||+++++ +++
T Consensus 170 l~~~~~~-~~~vivDEay~~f~~~~---s~~~~~~~~~n~iv~rSfSK~~glaGlRiGy~i~~~--~~i----------- 232 (351)
T PRK01688 170 LLELTRG-KAIVVADEAYIEFCPQA---SLAGWLAEYPHLVILRTLSKAFALAGLRCGFTLANE--EVI----------- 232 (351)
T ss_pred HHHhCCC-CcEEEEECchhhcCCCC---ChHHHHhhCCCEEEEecchHhhcCHHHHHhHHhCCH--HHH-----------
Confidence 4444544 68999999999986321 112223446799999999999999999999999987 343
Q ss_pred hhHHhhhhhh-hhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCCCc
Q 047983 83 SLNMRMDDYL-LLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSEDK 161 (233)
Q Consensus 83 ~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~ 161 (233)
..+.... .++.+...+..+. +.+.+...+++++.++.+.++++++.+.|++++++.. ..|.+++|+|
T Consensus 233 ---~~l~~~~~~~~v~~~~~~~a~-~~L~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-~~ps~~nfi~------- 300 (351)
T PRK01688 233 ---NLLLKVIAPYPLSTPVADIAA-QALSPQGIAAMRERVAEINANRQWLIAALKEIPCVEQ-VFDSETNYIL------- 300 (351)
T ss_pred ---HHHHhccCCCCCCHHHHHHHH-HHHhcchHHHHHHHHHHHHHHHHHHHHHHHhCCCCCe-ECCCCCcEEE-------
Confidence 3333221 1233333332333 3444344567888889999999999999988866542 4577899999
Q ss_pred ccccccccccCCCCChHHHHHHHHhccCEEEECCccc-CCCCcEEEEeecCHHHHHHHHHHH
Q 047983 162 CLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITV-GLKDWLRITFAVEPSAFEIGLGRM 222 (233)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f-~~~~~~Rl~~~~~~~~l~~~~~~l 222 (233)
++++ +..++.. .|.++||.|+++..| +.++|+|+|++.. ++.+..++.|
T Consensus 301 --~~~~--------~~~~l~~-~L~~~gi~vr~~~~~~~~~~~iRis~~~~-~e~~~l~~al 350 (351)
T PRK01688 301 --ARFT--------ASSAVFK-SLWDQGIILRDQNKQPGLSNCLRITIGTR-EECQRVIDAL 350 (351)
T ss_pred --EEcC--------CHHHHHH-HHHHCCeEEEECCCcCCCCCeEEEeCCCH-HHHHHHHHhh
Confidence 5543 2444444 455789999987665 4478999999953 4445555444
No 94
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.88 E-value=1.2e-21 Score=169.64 Aligned_cols=179 Identities=20% Similarity=0.286 Sum_probs=121.4
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
+++.++|++++.++|+||+|.++. +....++ ++..+++|+++||||.|++||+|+||+++++ +++
T Consensus 168 ~~l~~l~~~~~~~~ivDe~y~~~~--~~~~~~~--~~~~~~vi~~~S~SK~~~~~GlRiG~~v~~~--~~~--------- 232 (351)
T PRK14807 168 EDIIKIIEKSRGIVVVDEAYFEFY--GNTIVDV--INEFENLIVLRTLSKAFGLAGLRVGYAVANE--NIL--------- 232 (351)
T ss_pred HHHHHHHHhCCCEEEEeCcchhhc--ccchHHH--hhhCCCEEEEecchHhcccchhceeeeecCH--HHH---------
Confidence 468899999889999999999873 3222222 3445789999999999999999999999976 344
Q ss_pred hhhhHHhhhhhhh-hccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCC
Q 047983 81 SISLNMRMDDYLL-LSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSE 159 (233)
Q Consensus 81 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~ 159 (233)
..+..... .+.+...| .++.++++. .++++..+.++++++.+.+.|++++++.. .|.+|+|+|
T Consensus 233 -----~~~~~~~~~~~~~~~~q-~~~~~~l~~---~~~~~~~~~~~~~r~~l~~~l~~~~g~~~--~~~~~~~~~----- 296 (351)
T PRK14807 233 -----KYLNLVKSPYNINSLSQ-VIALKVLRT---GVLKERVNYILNERERLIKELSKIPGIKV--YPSKTNFIL----- 296 (351)
T ss_pred -----HHHHHccCCCCcCHHHH-HHHHHHHhH---HHHHHHHHHHHHHHHHHHHHHHhCCCcEE--CcCCccEEE-----
Confidence 33332211 23333333 555555542 35666777888999999999988767653 355688999
Q ss_pred CcccccccccccCCCCChHHHHHHHHhccCEEEECCccc-CCCCcEEEEeecCHHHHHHHHHHHHH
Q 047983 160 DKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITV-GLKDWLRITFAVEPSAFEIGLGRMKA 224 (233)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f-~~~~~~Rl~~~~~~~~l~~~~~~l~~ 224 (233)
++++ +.+.+.+.|.++||.|.+++.+ +..+|+|++++.+++ .+..++.|++
T Consensus 297 ----i~~~---------~~~~~~~~l~~~gV~v~~~~~~~~~~~~iRis~~~~~~-~~~l~~~l~~ 348 (351)
T PRK14807 297 ----VKFK---------DADYVYQGLLERGILVRDFSKVEGLEGALRITVSSCEA-NDYLINGLKE 348 (351)
T ss_pred ----EEcC---------CHHHHHHHHHHCCEEEEECCCCCCCCCeEEEEcCCHHH-HHHHHHHHHH
Confidence 5553 3445556666789999986543 446899999996432 2344444433
No 95
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.88 E-value=7.7e-22 Score=171.09 Aligned_cols=180 Identities=16% Similarity=0.207 Sum_probs=126.2
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|.++|+++|+++|+||+|.++. +....++ ....+++++++||||.||+||+|+||+++++ .++
T Consensus 178 ~~l~~l~~~~~~~li~De~y~~~~--~~~~~~~--~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~--~~~--------- 242 (361)
T PRK00950 178 EDIRKILESTDALVFVDEAYVEFA--EYDYTPL--ALEYDNLIIGRTFSKVFGLAGLRIGYGFVPE--WLI--------- 242 (361)
T ss_pred HHHHHHHHHCCcEEEEECchhhhC--ccchHHH--HHhcCCEEEEEeehHhhcCchhhcchhcCCH--HHH---------
Confidence 368899999999999999999876 2222222 2344789999999999999999999999987 333
Q ss_pred hhhhHHhhhhhhh-hccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCC
Q 047983 81 SISLNMRMDDYLL-LSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSE 159 (233)
Q Consensus 81 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~ 159 (233)
..+..... ++.+...+ .+....++ ..+++++.++.++++++.+.+.|+ +. ..|.+++|+|
T Consensus 243 -----~~~~~~~~~~~~~~~~~-~~a~~~l~--~~~~~~~~~~~~~~~r~~l~~~l~----~~--~~~~~~~~i~----- 303 (361)
T PRK00950 243 -----DYYMRAKTPFSLTRLSQ-AAAIAALS--DKEYIEKSIEHGIKSREYLYNELP----FK--VYPSEANFVL----- 303 (361)
T ss_pred -----HHHHHhcCCCCCCHHHH-HHHHHHhc--CHHHHHHHHHHHHHHHHHHHhhcC----ee--ECCCcceEEE-----
Confidence 33332222 22333333 33333333 246778888899999999888875 22 2466889999
Q ss_pred CcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC--CCcEEEEeecCHHHHHHHHHHHHHHH
Q 047983 160 DKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL--KDWLRITFAVEPSAFEIGLGRMKAFY 226 (233)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~~Rl~~~~~~~~l~~~~~~l~~~l 226 (233)
++++ +. ++.+++..++ ++||.+.||..|+. ++++|++++. .++++++++.|++++
T Consensus 304 ----~~~~-----~~-~~~~~~~~l~-~~gv~v~~~~~f~~~~~~~lRis~~~-~~~~~~l~~~L~~il 360 (361)
T PRK00950 304 ----VDVT-----PM-TAKEFCEELL-KRGVIVRDCTSFRGLGDYYIRVSIGT-FEENERFLEILKEIV 360 (361)
T ss_pred ----EECC-----CC-CHHHHHHHHH-HCCEEEeeCCccCCCCCCeEEEECCC-HHHHHHHHHHHHHHh
Confidence 5552 12 3555655555 67999999998864 5799999994 456788888887765
No 96
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.87 E-value=2.6e-21 Score=168.39 Aligned_cols=184 Identities=16% Similarity=0.227 Sum_probs=126.4
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
+++.++|+.++++||+||+|.+|.+++. ...+...+..+++|+++||||.|++||+|+||+++++ +++
T Consensus 180 ~~l~~l~~~~~~~lI~DE~y~~~~~~~~-~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~~~~~--~~~--------- 247 (368)
T PRK03317 180 DDVEAILDAAPGIVVVDEAYAEFRRSGT-PSALTLLPEYPRLVVSRTMSKAFAFAGGRLGYLAAAP--AVV--------- 247 (368)
T ss_pred HHHHHHHHHCCceEEEeCCchhhcccCC-cCHHHHHHhCCCEEEEEechhhhccchhhhhhhhCCH--HHH---------
Confidence 3678888888999999999999877653 2222223445689999999999999999999999987 343
Q ss_pred hhhhHHhhhhhh-hhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCC
Q 047983 81 SISLNMRMDDYL-LLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSE 159 (233)
Q Consensus 81 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~ 159 (233)
..+.... .++.++..+ .+..+.++. . ++..+.++.++++++.+.+.|++. ++. +..|+|++++|
T Consensus 248 -----~~l~~~~~~~~~s~~~~-~a~~~~l~~-~-~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~----- 312 (368)
T PRK03317 248 -----DALRLVRLPYHLSAVTQ-AAARAALRH-A-DELLASVAALRAERDRVVAWLREL-GLR-VAPSDANFVLF----- 312 (368)
T ss_pred -----HHHHhcCCCCCCCHHHH-HHHHHHhhC-H-HHHHHHHHHHHHHHHHHHHHHHHC-CCE-eCCCCCcEEEE-----
Confidence 3333221 233333333 343444432 2 334455667889999999999887 554 36788999888
Q ss_pred CcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeecCHHHHHHHHHHHHHHHHH
Q 047983 160 DKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAVEPSAFEIGLGRMKAFYYR 228 (233)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~~~~~l~~~~~~l~~~l~~ 228 (233)
..++ +...+.+.|.++||.|.+. +..+|+|++++. .++++..++.|.+++..
T Consensus 313 ----~~~~---------~~~~~~~~l~~~Gv~v~~~---~~~~~iRi~~~~-~~~~~~~~~~l~~~~~~ 364 (368)
T PRK03317 313 ----GRFA---------DRHAVWQGLLDRGVLIRDV---GIPGWLRVTIGT-PEENDAFLAALAEVLAT 364 (368)
T ss_pred ----eccC---------CHHHHHHHHHHCCEEEEeC---CCCCeEEEecCC-HHHHHHHHHHHHHHHHH
Confidence 3332 2334455566789999874 346899999984 45678888888877654
No 97
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.87 E-value=2.6e-21 Score=166.93 Aligned_cols=185 Identities=17% Similarity=0.266 Sum_probs=132.5
Q ss_pred hHHHHHHHc--CcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 2 CIEETTKKL--GIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 2 ~i~~l~~~~--~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
+|.++++.. +.+||+||+|.+|.. ......+..++|+|++.||||.||++|+|+||+++++ +++
T Consensus 166 ~l~~l~~~~~~~~~vVvDEAY~eF~~----~~~~~l~~~~~nlivlRTfSKa~gLAGlRlGy~ia~~--~~i-------- 231 (356)
T COG0079 166 ELRALLEALPEGGLVVIDEAYIEFSP----ESSLELLKYPPNLIVLRTFSKAFGLAGLRVGYAIANP--ELI-------- 231 (356)
T ss_pred HHHHHHHhCCCCcEEEEeCchhhcCC----chhhhhccCCCCEEEEEecHHhhhcchhceeeccCCH--HHH--------
Confidence 445555543 899999999999874 2222222356789999999999999999999999988 344
Q ss_pred hhhhhHHhhhhhh-hhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecC
Q 047983 80 HSISLNMRMDDYL-LLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGS 158 (233)
Q Consensus 80 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~ 158 (233)
..+.... -++.+.+.+..+.+++ ...+++++..+.+.+.|+++.+.|+.++ ... ..|..+.|++
T Consensus 232 ------~~l~~vr~p~~v~~~a~~aa~aal---~~~~~~~~~~~~~~~~r~rl~~~l~~~~-~~~-v~pS~aNFvl---- 296 (356)
T COG0079 232 ------AALNKVRPPFNVSSPALAAAIAAL---RDADYLEESVERIREERERLYAALKALG-LFG-VFPSQANFVL---- 296 (356)
T ss_pred ------HHHHHhcCCCCCCHHHHHHHHHHc---ccHHHHHHHHHHHHHHHHHHHHHHHhCC-CCe-ecCCCCcEEE----
Confidence 3343332 2444444443555554 2348999999999999999999999986 432 3566688998
Q ss_pred CCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccC-CCCcEEEEeecCHHHHHHHHHHHHHHHHH
Q 047983 159 EDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVG-LKDWLRITFAVEPSAFEIGLGRMKAFYYR 228 (233)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~-~~~~~Rl~~~~~~~~l~~~~~~l~~~l~~ 228 (233)
++++. .+ ...+.+.|.++||+|+....-+ .++|+|+++++.+++ +..++.|.+++..
T Consensus 297 -----v~~~~------~~-~~~l~~~L~~~giivR~~~~~~~~~~~lRitvgt~een-~~ll~AL~~~~~~ 354 (356)
T COG0079 297 -----VRVPD------AE-AAALAEALLKKGILVRDCSSVGLLPGYLRITVGTPEEN-DRLLAALREVLKG 354 (356)
T ss_pred -----EECCC------cc-HHHHHHHHHHCCEEEEeCCCCCCCCCeEEEEeCCHHHH-HHHHHHHHHHHhc
Confidence 44431 12 5567777888899999986522 368999999987776 7777777776653
No 98
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.86 E-value=6.1e-21 Score=164.98 Aligned_cols=186 Identities=18% Similarity=0.262 Sum_probs=126.0
Q ss_pred hHHHHHHHc-CcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 2 CIEETTKKL-GIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 2 ~i~~l~~~~-~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++.++++.+ ++++|+||+|.+|. +....++ .+..+++|+++||||.|++||+|+||+++++ .+++. +
T Consensus 165 ~~~~l~~~~~~~~livDe~y~~~~--~~~~~~~--~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~--~~~~~---l--- 232 (353)
T PRK05387 165 EIERILAANPDSVVVIDEAYVDFG--GESAIPL--IDRYPNLLVVQTFSKSRSLAGLRVGFAIGHP--ELIEA---L--- 232 (353)
T ss_pred HHHHHHHhCCCcEEEEeCcccccC--CcchHHH--HhhCCCEEEEEehhHhhcchhhhceeeecCH--HHHHH---H---
Confidence 567777765 99999999998863 3222222 2345789999999999999999999999876 34421 1
Q ss_pred hhhhHHhhhhh-hhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCC
Q 047983 81 SISLNMRMDDY-LLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSE 159 (233)
Q Consensus 81 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~ 159 (233)
.+.... ..++.+...+ .++...+. ..++.++.++.+.++++.+.+.|+++ ++.. .|.+++|+|
T Consensus 233 -----~~~~~~~~~~~~~~~~q-~~~~~~l~--~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~--~~~~~~~~~----- 296 (353)
T PRK05387 233 -----NRVKNSFNSYPLDRLAQ-AGAIAAIE--DEAYFEETRAKVIATRERLVEELEAL-GFEV--LPSKANFVF----- 296 (353)
T ss_pred -----HHhhccCCCCCcCHHHH-HHHHHHhc--CHHHHHHHHHHHHHHHHHHHHHHHHC-CCeE--CCCcCcEEE-----
Confidence 222211 1122333333 44444443 24567888999999999999999887 5542 466788999
Q ss_pred CcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeecCHHHHHHHHHHHHHHHH
Q 047983 160 DKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAVEPSAFEIGLGRMKAFYY 227 (233)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~~~~~l~~~~~~l~~~l~ 227 (233)
++++ . . ++.++... |.++||.|.+.......+++|++++ +.++++.+++.|.+++.
T Consensus 297 ----~~~~--~---~-~~~~~~~~-l~~~gi~v~~~~~~~~~~~iRis~~-~~~~~~~~~~~L~~~~~ 352 (353)
T PRK05387 297 ----ARHP--S---H-DAAELAAK-LRERGIIVRHFNKPRIDQFLRITIG-TDEEMEALVDALKEILA 352 (353)
T ss_pred ----EECC--C---C-CHHHHHHH-HHHCCEEEEECCCCCCCCeEEEEeC-CHHHHHHHHHHHHHHhh
Confidence 5543 1 1 34555555 5678999986433223689999998 45778899988887654
No 99
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.86 E-value=3.1e-21 Score=167.19 Aligned_cols=179 Identities=19% Similarity=0.261 Sum_probs=122.2
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHS 81 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~ 81 (233)
++.++++..++++|+||+|.+|.+.+ ..+ .+...+++++++|||| +++||+|+||+++++ .++
T Consensus 174 ~~~~i~~~~~~~ii~De~y~~~~~~~--~~~--~~~~~~~vi~~~S~SK-~~~~GlRiG~~i~~~--~~i---------- 236 (356)
T PRK04870 174 DVERIIEAAPGLVVVDEAYQPFAGDS--WLP--RLARFPNLLVMRTVSK-LGLAGLRLGYLAGHP--AWI---------- 236 (356)
T ss_pred HHHHHHHHCCCEEEEECCchhhcCcc--hHH--HHhhCCCEEEEecchh-hhhHHHhhhhhhCCH--HHH----------
Confidence 34455554488999999999976432 111 2344578999999999 799999999999987 343
Q ss_pred hhhHHhhhhhh-hhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCCC
Q 047983 82 ISLNMRMDDYL-LLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSED 160 (233)
Q Consensus 82 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~ 160 (233)
..+.... .++.+...+ .+...+++ ..+++++.++.++++++.+.+.|++++++. ..|.+|+|+|
T Consensus 237 ----~~~~~~~~~~~~~~~~q-~~a~~~l~--~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~--~~~~~~~~~~------ 301 (356)
T PRK04870 237 ----AELDKVRPPYNVNVLTQ-ATALFALE--HVDVLDAQAAQLRAERTRLAAALAALPGVT--VFPSAANFIL------ 301 (356)
T ss_pred ----HHHHHccCCCcCCHHHH-HHHHHHHh--CHHHHHHHHHHHHHHHHHHHHHHHhCCCcE--ECCCCCeEEE------
Confidence 3333221 122222333 33344443 234578888999999999999998887764 3466788999
Q ss_pred cccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC--CCcEEEEeecCHHHHHHHHHHHHHH
Q 047983 161 KCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL--KDWLRITFAVEPSAFEIGLGRMKAF 225 (233)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~~Rl~~~~~~~~l~~~~~~l~~~ 225 (233)
++++ ++.+ +.+.|+++||.|.||+.|+. .+|+|++++.. ++.+..++.|.++
T Consensus 302 ---~~~~--------~~~~-~~~~l~~~gI~v~~~~~f~~~~~~~iRis~~~~-~~~~~l~~al~~~ 355 (356)
T PRK04870 302 ---VRVP--------DAAA-VFDGLKTRGVLVKNLSGMHPLLANCLRVTVGTP-EENAQFLAALKAA 355 (356)
T ss_pred ---EECC--------CHHH-HHHHHHHCCEEEEECCCCCCCCCCeEEEeCCCH-HHHHHHHHHHHHh
Confidence 5553 1444 45667889999999999964 68999999963 3345555555543
No 100
>PLN02368 alanine transaminase
Probab=99.86 E-value=2.4e-21 Score=170.48 Aligned_cols=144 Identities=17% Similarity=0.274 Sum_probs=103.3
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCC-cccccccc----C----CccCEEEEccCcccc-CCCCceEEEEEe---cCC
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNT-HFVPMGVF----G----SIVPVLTLGSISKRW-IVPGWRLGWLVT---SDP 67 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~-~~~~~~~~----~----~~~~~i~~~s~sK~~-~~~G~R~G~~~~---~~~ 67 (233)
++|+++|++||++||+||+|.++.|++. .+.++..+ + ..+++|+++||||.| ++||||+||+++ ++
T Consensus 233 ~~l~~~a~~~~~~II~DE~Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~- 311 (407)
T PLN02368 233 REILKFCYQERLVLLGDEVYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPP- 311 (407)
T ss_pred HHHHHHHHHcCCEEEEEccccccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCH-
Confidence 3689999999999999999999999764 34444322 2 245899999999998 899999999995 44
Q ss_pred CccccccchhhhhhhhhHHhhhhhhhhccCcchHHHHHHHHhhhc---------HHHHHHHHHHHHHHHHHHHHHHhhcC
Q 047983 68 NGILQDLGVAFFHSISLNMRMDDYLLLSESVYTTVGAVPQILEKT---------EEEFFSKITDILREAADICCDRLKEI 138 (233)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---------~~~~~~~~~~~~~~~~~~l~~~L~~~ 138 (233)
++++. + .+.. ...++.+...| .++..+++.. ..++.+++++.+++|++.+.+.|+++
T Consensus 312 -~li~~--~---------~~~~-~~~~~~~~~~Q-~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~ 377 (407)
T PLN02368 312 -KTVEE--I---------YKVA-SIALSPNVSGQ-IFMGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSC 377 (407)
T ss_pred -HHHHH--H---------HHHh-cccCCCCcHHH-HHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 34431 1 2222 12334444444 4444445432 12334567899999999999999998
Q ss_pred CCcccccCCCccEEEEEecCCCccccccccc
Q 047983 139 PCITCPKKPEGSMFVMYCGSEDKCLLKLNYS 169 (233)
Q Consensus 139 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 169 (233)
+++.+ ..|+||||+| ++++++
T Consensus 378 ~g~~~-~~P~Gafy~~---------~~i~lp 398 (407)
T PLN02368 378 KNVVC-NFTEGAMYSF---------PQIKLP 398 (407)
T ss_pred CCeEe-CCCCeeeEec---------cCCCCC
Confidence 88875 7899999999 777665
No 101
>PRK03321 putative aminotransferase; Provisional
Probab=99.86 E-value=3.1e-21 Score=166.88 Aligned_cols=182 Identities=20% Similarity=0.306 Sum_probs=121.6
Q ss_pred hHHHHHHH--cCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 2 CIEETTKK--LGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 2 ~i~~l~~~--~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
+|.++|+. ++++||+||+|.++.+++..+.++...+..+++++++||||.|++||+|+||+++++ +++
T Consensus 166 ~l~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~--~~~-------- 235 (352)
T PRK03321 166 ELARFLDAVPADVLVVLDEAYVEYVRDDDVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVGHP--EVI-------- 235 (352)
T ss_pred HHHHHHHhCCCCeEEEEechHHHhccCcCCCcHHHHHhhCCCEEEEecchHHhhhHHHhhhhhcCCH--HHH--------
Confidence 57777776 599999999999998876433344444556799999999999999999999999986 444
Q ss_pred hhhhhHHhhhhh-hhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecC
Q 047983 80 HSISLNMRMDDY-LLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGS 158 (233)
Q Consensus 80 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~ 158 (233)
..+... ...+.+...+..+.+.+ . ..+.+.+.. +.+.++++.+.+.|++. ++.. .+.+|+|+|
T Consensus 236 ------~~~~~~~~~~~~s~~~q~~a~~~l-~-~~~~~~~~~-~~~~~~r~~~~~~L~~~-~~~~--~~~~g~~i~---- 299 (352)
T PRK03321 236 ------AALRKVAVPFSVNSLAQAAAIASL-A-AEDELLERV-DAVVAERDRVRAALRAA-GWTV--PPSQANFVW---- 299 (352)
T ss_pred ------HHHHHhcCCCCCCHHHHHHHHHHh-c-CHHHHHHHH-HHHHHHHHHHHHHHHHC-CCcc--CCCCCCEEE----
Confidence 333322 12333444443444444 2 233444444 44456667888999886 5542 345689999
Q ss_pred CCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeecCHHHHHHHHHHHHHHHH
Q 047983 159 EDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAVEPSAFEIGLGRMKAFYY 227 (233)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~~~~~l~~~~~~l~~~l~ 227 (233)
++++ . ++.++.. .|+++||.|.| |+ .+++||+++. .++.+++++.|.+++.
T Consensus 300 -----i~l~--~-----~~~~~~~-~l~~~gI~v~~---~~-~~~iRi~~~~-~~~~~~~~~al~~~~~ 350 (352)
T PRK03321 300 -----LPLG--E-----RTADFAA-AAAEAGVVVRP---FA-GEGVRVTIGA-PEENDAFLRAARAWRA 350 (352)
T ss_pred -----EeCC--C-----CHHHHHH-HHHHCCEEEEc---cC-CCcEEEeeCC-HHHHHHHHHHHHHHhc
Confidence 5442 1 2444554 45788999987 43 4579999974 4456788888877653
No 102
>PRK09105 putative aminotransferase; Provisional
Probab=99.86 E-value=1.1e-20 Score=164.73 Aligned_cols=180 Identities=15% Similarity=0.232 Sum_probs=118.1
Q ss_pred hHHHHHH--HcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 2 CIEETTK--KLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 2 ~i~~l~~--~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
+|.++++ +++++||+||+|.+|... +......+..+++++++||||.||++|+|+||+++++ +++
T Consensus 186 ~l~~l~~~~~~~~~lIvDEaY~~f~~~---~s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~--~~i-------- 252 (370)
T PRK09105 186 DIEWLLANKPAGSVLLVDEAYIHFSDA---PSVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAARP--DLL-------- 252 (370)
T ss_pred HHHHHHHhCCCCcEEEEECchHHhccC---cchHHHHhhCCCEEEEecccHhhcCCccceeeeecCH--HHH--------
Confidence 3444443 348999999999887532 1112222446799999999999999999999999987 333
Q ss_pred hhhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCC
Q 047983 80 HSISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSE 159 (233)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~ 159 (233)
..+......+.+...+.++.+.+ . ..+++++.++.++++++.+.+.|+++ ++.. .+|+|+|| |
T Consensus 253 ------~~l~~~~~~~~~~~~~~aa~~~L-~--~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~-~~~~~~f~-~----- 315 (370)
T PRK09105 253 ------AKLARFGHNPLPVPAAAAGLASL-R--DPKLVPQRRAENAAVREDTIAWLKKK-GYKC-TPSQANCF-M----- 315 (370)
T ss_pred ------HHHHhcCCCCcCHHHHHHHHHHH-h--CHHHHHHHHHHHHHHHHHHHHHHHHC-CCCc-CCCCCcEE-E-----
Confidence 33333311222222222444443 2 25688999999999999999999987 5553 56777766 5
Q ss_pred CcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC-CCcEEEEeecCHHHHHHHHHHHHHHH
Q 047983 160 DKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL-KDWLRITFAVEPSAFEIGLGRMKAFY 226 (233)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~-~~~~Rl~~~~~~~~l~~~~~~l~~~l 226 (233)
++++ . ++.++...++ ++||.| |..|+. ++|+|++++. +++.+..++.|.+++
T Consensus 316 ----~~~~--~-----~~~~l~~~L~-~~gI~v--~~~~~~~~~~~Ris~~~-~~~~~~l~~al~~~~ 368 (370)
T PRK09105 316 ----VDVK--R-----PAKAVADAMA-KQGVFI--GRSWPIWPNWVRVTVGS-EEEMAAFRSAFAKVM 368 (370)
T ss_pred ----EeCC--C-----CHHHHHHHHH-HCCcEE--ecCCCCCCCeEEEEcCC-HHHHHHHHHHHHHHh
Confidence 3332 1 3556666655 569998 445643 6899999996 444566666665544
No 103
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.85 E-value=9.1e-21 Score=164.23 Aligned_cols=181 Identities=14% Similarity=0.141 Sum_probs=120.1
Q ss_pred hHHHHHHHc-CcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 2 CIEETTKKL-GIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 2 ~i~~l~~~~-~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++.++++.. +++||+||+|.+|.... ....+ ....+++|+++||||.|++||+|+||+++++ +++
T Consensus 168 ~l~~l~~~~~~~~vivDeay~~~~~~~-s~~~~--~~~~~~~iv~~S~SK~~~l~GlRlG~~i~~~--~~~--------- 233 (354)
T PRK04635 168 DIEQLIEMTPDAIVVVDEAYIEFCPEY-SVADL--LASYPNLVVLRTLSKAFALAGARCGFTLANE--ELI--------- 233 (354)
T ss_pred HHHHHHHhCCCcEEEEeCchHhhccCc-chHHH--HhhCCCEEEEechHHHhhhhHHHHhhhhCCH--HHH---------
Confidence 456666553 69999999999986321 11111 2345789999999999999999999999987 343
Q ss_pred hhhhHHhhhhhh-hhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCC
Q 047983 81 SISLNMRMDDYL-LLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSE 159 (233)
Q Consensus 81 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~ 159 (233)
..+.... .++.+.+.+..+++. +.+...+++++.++.++++++.+.+.|++++++.. .+| +|.|+|
T Consensus 234 -----~~l~~~~~~~~~~~~~~~~a~~~-l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-~~~-~g~f~~----- 300 (354)
T PRK04635 234 -----EILMRVIAPYPVPLPVSEIATQA-LSEAGLARMKFQVLDLNAQGARLQAALSMYGGAKV-LEG-NGNYVL----- 300 (354)
T ss_pred -----HHHHhhcCCCCCCHHHHHHHHHH-HhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCceE-CCC-CCcEEE-----
Confidence 3332211 123333333244344 43344456778888999999999999998865553 455 467889
Q ss_pred CcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeecCHHHHHHHHHHHH
Q 047983 160 DKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAVEPSAFEIGLGRMK 223 (233)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~~~~~l~~~~~~l~ 223 (233)
++++ +.. .+.++|+++||.|++++.++..+|+|+|++. .++++..++.|+
T Consensus 301 ----~~~~--------~~~-~~~~~l~~~gv~v~~~~~~~~~~~lRis~~~-~e~~~~l~~al~ 350 (354)
T PRK04635 301 ----AKFD--------DVD-AVFKALWDAGIVARAYKDPRLANCIRFSFSN-RAETDKLIGLIR 350 (354)
T ss_pred ----EECC--------CHH-HHHHHHHHCCEEEEECCCCCCCCeEEEEeCC-HHHHHHHHHHHH
Confidence 5443 133 4456777899999976554456899999985 444555555553
No 104
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.85 E-value=2.6e-20 Score=160.30 Aligned_cols=173 Identities=19% Similarity=0.271 Sum_probs=117.1
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHS 81 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~ 81 (233)
++.+++ +++++||+||+|.+|. +....++ +...+++|+++||||.|++||+|+||+++++ +++
T Consensus 159 ~l~~l~-~~~~~ii~DE~Y~~f~--~~~~~~~--~~~~~~vi~~~S~SK~~~l~GlRvG~~v~~~--~~~---------- 221 (335)
T PRK14808 159 EIERIL-KTGAFVALDEAYYEFH--GESYVDL--LKKYENLAVIRTFSKAFSLAAQRIGYVVSSE--KFI---------- 221 (335)
T ss_pred HHHHHH-hcCCEEEEECchhhhc--CCchHHH--HHhCCCEEEEEechhhccCcccceEEEEeCH--HHH----------
Confidence 566777 5899999999999974 2222221 2345789999999999999999999999987 344
Q ss_pred hhhHHhhhhhh-hhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCCC
Q 047983 82 ISLNMRMDDYL-LLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSED 160 (233)
Q Consensus 82 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~ 160 (233)
..+.... .++.+...+ .+....++ . .++..+.++.+.++++.+.+.|+++ ++.. .+| .|.|+|
T Consensus 222 ----~~l~~~~~~~~~~~~~q-~a~~~~l~-~-~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~-~~~-~g~f~~------ 285 (335)
T PRK14808 222 ----DAYNRVRLPFNVSYVSQ-MFAKVALD-H-REIFEERTKFIVEERERMKSALREM-GYRI-TDS-RGNFVF------ 285 (335)
T ss_pred ----HHHHHhcCCCCCCHHHH-HHHHHHHh-C-HHHHHHHHHHHHHHHHHHHHHHHHC-CCEE-CCC-CCeEEE------
Confidence 3332222 234444444 33344443 2 3466777888888899999999887 4543 456 466779
Q ss_pred cccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeecCHHHHHHHHHHHH
Q 047983 161 KCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAVEPSAFEIGLGRMK 223 (233)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~~~~~l~~~~~~l~ 223 (233)
++++. .+...+...|.++||.|++ | .+++|++++..+ +.+..++.|.
T Consensus 286 ---~~l~~-------~~~~~~~~~l~~~Gi~V~~---~--~~~~Risi~~~~-~~~~~~~~l~ 332 (335)
T PRK14808 286 ---IFMEK-------EEKERLLEHLRAKNIAVRS---F--REGVRITIGKRE-ENDMILKELE 332 (335)
T ss_pred ---EeCCC-------ccHHHHHHHHHHCCeEEEE---C--CCCeEEecCCHH-HHHHHHHHHH
Confidence 55542 1335566777788999985 3 379999998654 3455555554
No 105
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.85 E-value=1.8e-20 Score=161.61 Aligned_cols=179 Identities=20% Similarity=0.301 Sum_probs=124.7
Q ss_pred hHHHHHHHc--CcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 2 CIEETTKKL--GIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 2 ~i~~l~~~~--~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++.++|+.+ |+++|+||+|.++...+ .+.+. ....+++++++|+||.|+++|+|+||+++++ +++
T Consensus 163 ~~~~l~~~~~~~~~ii~D~~y~~~~~~~-~~~~~--~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~--~~~-------- 229 (346)
T TIGR01141 163 DIEAVLERTPEDALVVVDEAYGEFSGEP-STLPL--LAEYPNLIVLRTLSKAFGLAGLRIGYAIANA--EII-------- 229 (346)
T ss_pred HHHHHHHhCCCCcEEEEECchhhhcCCc-cHHHH--HhhCCCEEEEehhhHhhhchhhhceeeecCH--HHH--------
Confidence 566677666 99999999999876543 21122 2234578999999999999999999999976 343
Q ss_pred hhhhhHHhhhhhh-hhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecC
Q 047983 80 HSISLNMRMDDYL-LLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGS 158 (233)
Q Consensus 80 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~ 158 (233)
..+.... .++.++..+ .+...+++.. .+..+.++.++++++.+.+.|++++++.. .|.+|+|+|
T Consensus 230 ------~~~~~~~~~~~~~~~~~-~~~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~~g~~~--~~~~g~~~~---- 294 (346)
T TIGR01141 230 ------DALNKVRAPFNLSRLAQ-AAAIAALRDD--DFIEKTVEEINAERERLYDGLKKLPGLEV--YPSDANFVL---- 294 (346)
T ss_pred ------HHHHhccCCCCCCHHHH-HHHHHHhCCH--HHHHHHHHHHHHHHHHHHHHHHhcCCCEE--CCCcCCEEE----
Confidence 3333222 233333343 3334444332 37888999999999999999988766653 455788999
Q ss_pred CCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC-CCcEEEEeecCHHHHHHHHHHH
Q 047983 159 EDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL-KDWLRITFAVEPSAFEIGLGRM 222 (233)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~-~~~~Rl~~~~~~~~l~~~~~~l 222 (233)
+.++ . ++.++.. .|.++||.+.||+.|+. .+++|++++ ++++++.+++.|
T Consensus 295 -----~~~~--~-----~~~~~~~-~L~~~gI~v~~g~~f~~~~~~iRls~~-~~~~i~~~~~~l 345 (346)
T TIGR01141 295 -----IRFP--R-----DADALFE-ALLEKGIIVRDLNSYPGLPNCLRITVG-TREENDRFLAAL 345 (346)
T ss_pred -----EecC--C-----CHHHHHH-HHHHCCeEEEeCCCcCCCCCeEEEecC-CHHHHHHHHHHh
Confidence 5443 1 2455555 45578999999998865 789999988 566677777665
No 106
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.84 E-value=2.3e-20 Score=160.72 Aligned_cols=175 Identities=19% Similarity=0.230 Sum_probs=116.1
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|.+++ +++++||+||+|.+|.. ....++ ....+++|+++||||.|++||+|+||+++++ +++
T Consensus 160 ~~l~~i~-~~~~~ii~De~y~~~~~--~~~~~~--~~~~~~vi~l~S~SK~~~l~GlRiG~iv~~~--~~i--------- 223 (337)
T PRK03967 160 EEILKVL-ETGKPVVLDEAYAEFSG--KSLIGL--IDEYPNLILLRTFSKAFGLAGIRAGYAIANE--EII--------- 223 (337)
T ss_pred HHHHHHH-hcCCEEEEECchhhhcc--cchHHH--HhhCCCEEEEecchHhhcchhhhheeeecCH--HHH---------
Confidence 3677888 47999999999999862 222121 2345789999999999999999999999987 344
Q ss_pred hhhhHHhhhhhhh-hccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCC
Q 047983 81 SISLNMRMDDYLL-LSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSE 159 (233)
Q Consensus 81 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~ 159 (233)
..+..... ++.+...+ .++..+++ . .++..+.++.+.++++.+.+.|.+. ..|.+++|+|
T Consensus 224 -----~~~~~~~~~~~~~~~~q-~~~~~~l~-~-~~~~~~~~~~~~~~r~~l~~~L~~~------~~~~~~~~~~----- 284 (337)
T PRK03967 224 -----DALYRIKPPFSLNILTM-KIVRLALD-H-YDLIEERIDYIIKERERVRRELGEY------AYPSDANFLL----- 284 (337)
T ss_pred -----HHHHhhcCCCCCCHHHH-HHHHHHHh-C-HHHHHHHHHHHHHHHHHHHHHhccC------cCCCCCcEEE-----
Confidence 33333222 23222333 55555554 2 3356666666777888888888663 2467899999
Q ss_pred CcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeecCHHHHHHHHHHHHHHHHHH
Q 047983 160 DKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAVEPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~~~~~l~~~~~~l~~~l~~~ 229 (233)
++++ +.+.|.++||.|+++.. ...+|+|++++.+ ++.++.++.|.++.+.+
T Consensus 285 ----~~~~-------------~~~~l~~~gi~v~~~~~-~~~~~~Ri~~~~~-~~~~~l~~~l~~~~~~~ 335 (337)
T PRK03967 285 ----LKLD-------------AYDYLLENGIVVRKLSG-RLEGHIRVTVGKR-EENDEFIKALKEIKEGY 335 (337)
T ss_pred ----EhHH-------------HHHHHHHCCEEEEeCCC-CCCCeEEEecCCH-HHHHHHHHHHHHHHHhc
Confidence 4432 24555577999998753 2367999999963 33356666665555443
No 107
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.84 E-value=8.4e-20 Score=157.61 Aligned_cols=182 Identities=17% Similarity=0.211 Sum_probs=119.1
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|+++|++||++||+||+|..+..+.....+..... .+ +++.|+|| +++|+|+||+++++ ++++. +
T Consensus 158 ~~i~~la~~~~~~livDEAy~~~~~~~~~~~~~~~~~--~d-ivv~s~SK--alaG~r~G~v~~~~--~li~~---l--- 224 (346)
T TIGR03576 158 KRVIKQAKSKEAIVLVDDASGARVRRLYGQPPALDLG--AD-LVVTSTDK--LMDGPRGGLLAGRK--ELVDK---I--- 224 (346)
T ss_pred HHHHHHHHHcCCEEEEECCccccccccCCCCCHHHcC--Cc-EEEeccch--hccccceEEEEeCH--HHHHH---H---
Confidence 3688999999999999999998764311111222222 22 66779999 67899999999987 45431 1
Q ss_pred hhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCCC
Q 047983 81 SISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSED 160 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~ 160 (233)
.+......++.+++.+.++++++ +.. ..+..++.+++|++.+.+.++.+ .. .++. +.|+|
T Consensus 225 -----~~~~~~~~~s~~~~~~~aa~~aL-~~~---~~~~~~~~l~~r~~~~~~~l~~~---~~-~~~~-~~f~~------ 284 (346)
T TIGR03576 225 -----KSVGEQFGLEAQAPLLAAVVRAL-EEF---ELSRIRDAFKRKEEVYLRLFDKL---NV-ERTP-TGFVI------ 284 (346)
T ss_pred -----HHhhcCcccCccHHHHHHHHHHH-hhc---cHHHHHHHHHHHHHHHHHHHHhC---CC-CcCC-CeEEE------
Confidence 22222222333344433444444 221 13567889999999998888754 22 2333 34899
Q ss_pred cccccccccccCCCCChHHHHHHHHhccCEEEECCcccC-CCCcEEEEeecCHH---HHHHHHHHHHH
Q 047983 161 KCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVG-LKDWLRITFAVEPS---AFEIGLGRMKA 224 (233)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~-~~~~~Rl~~~~~~~---~l~~~~~~l~~ 224 (233)
++++. .++.+++.++|+++||.++||+.|. .++|+|+|++.+++ +.+..++.|++
T Consensus 285 ---~~~~~------~~~~~~~~~ll~~~gV~v~~~~~f~~~~~~vRis~~~~~~~~~~~~~~~~al~~ 343 (346)
T TIGR03576 285 ---KGVEE------EKLIEIGLDLLRNYGIITITAVGMPGASKTLRFDLAAKDAERIGDDYLVEAVKD 343 (346)
T ss_pred ---EeCCC------CCHHHHHHHHHHhCCEEEeCCcccCCCCCeEEEEEecChHHhcCHHHHHHHHHh
Confidence 54431 1357899999999999999999985 37899999998664 44555555543
No 108
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.83 E-value=6.5e-19 Score=151.00 Aligned_cols=190 Identities=29% Similarity=0.489 Sum_probs=140.5
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHS 81 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~ 81 (233)
+|+++|+++|+++|+|++|+.+.+.+.....+...+..+.+++++|++|.++.+|.|+||++++++ .++
T Consensus 156 ~l~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~-~~~---------- 224 (350)
T cd00609 156 ELAELAKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPE-ELL---------- 224 (350)
T ss_pred HHHHHHHhCCeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccCCcccceEEEecCHH-HHH----------
Confidence 466899999999999999999887764432223345556789999999998889999999999773 233
Q ss_pred hhhHHhhhhhhhh-ccCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCC
Q 047983 82 ISLNMRMDDYLLL-SESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSE 159 (233)
Q Consensus 82 ~~~~~~~~~~~~~-~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~ 159 (233)
+.+...... ...++... .++..+++... ++.++.++.++++++++.+.|++.+.... ..+.+|+++|
T Consensus 225 ----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~g~~~~----- 293 (350)
T cd00609 225 ----ERLKKLLPYTTSGPSTLSQAAAAAALDDGE-EHLEELRERYRRRRDALLEALKELGPLVV-VKPSGGFFLW----- 293 (350)
T ss_pred ----HHHHHHHHhcccCCChHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHHHhcCCccc-cCCCccEEEE-----
Confidence 333322222 12223333 55555554333 78889999999999999999998755542 4678899999
Q ss_pred CcccccccccccCCCCChHHHHHHHHhccCEEEECCcccC--CCCcEEEEeecCHHHHHHHHHHHH
Q 047983 160 DKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVG--LKDWLRITFAVEPSAFEIGLGRMK 223 (233)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~--~~~~~Rl~~~~~~~~l~~~~~~l~ 223 (233)
++++.. .+...+.++|+++||.+.++..|. ...++|++++...++++.++++|+
T Consensus 294 ----~~~~~~------~~~~~~~~~l~~~gi~i~~~~~~~~~~~~~iRi~~~~~~~~i~~~~~al~ 349 (350)
T cd00609 294 ----LDLPEG------DDEEFLERLLLEAGVVVRPGSAFGEGGEGFVRLSFATPEEELEEALERLA 349 (350)
T ss_pred ----EecCCC------ChHHHHHHHHHhCCEEEecccccccCCCCeEEEEeeCCHHHHHHHHHHhh
Confidence 554321 257788889999999999998887 578999999987888888888775
No 109
>PLN02822 serine palmitoyltransferase
Probab=99.79 E-value=4e-18 Score=153.07 Aligned_cols=200 Identities=17% Similarity=0.129 Sum_probs=134.4
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCC--ccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNT--HFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAF 78 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~--~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~ 78 (233)
++|+++|++||+++|+||+|+...++.. .......+...+..|+++||||.|+.+| ||+++++ .+++. .
T Consensus 265 ~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~sKalg~~G---G~i~g~~--~ii~~---~- 335 (481)
T PLN02822 265 DEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAMGHALATEG---GFCTGSA--RVVDH---Q- 335 (481)
T ss_pred HHHHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCCCCCeEEEecchhhhhhCC---eEEEcCH--HHHHH---H-
Confidence 4799999999999999999997777632 2212222222355689999999999999 9999987 34421 1
Q ss_pred hhhhhhHHhhhhhhhhccCcchHH--HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEe
Q 047983 79 FHSISLNMRMDDYLLLSESVYTTV--GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYC 156 (233)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~ 156 (233)
........++.+.+++. ++++++ + ..++ ..+.++.++++++++.+.|++++++.. ..+.++++++
T Consensus 336 -------~~~~~~~~fsa~lPp~~~~Aa~~aL-~-~l~~-~~~~~~~l~~~~~~l~~~L~~~~g~~~-~~~~~spi~~-- 402 (481)
T PLN02822 336 -------RLSSSGYVFSASLPPYLASAAITAI-D-VLED-NPSVLAKLKENIALLHKGLSDIPGLSI-GSNTLSPIVF-- 402 (481)
T ss_pred -------HhcCCceeeccccCHHHHHHHHHHH-H-HHHh-CHHHHHHHHHHHHHHHHHHHhcCCccc-CCCCCCCEEE--
Confidence 11122223444433332 444444 2 2222 257888999999999999998766664 5667889998
Q ss_pred cCCCcccccccccccCCCC-C---hHHHHHHHHhccCEEEECC--cccCC---CCcEEEEee--cCHHHHHHHHHHHHHH
Q 047983 157 GSEDKCLLKLNYSLLEGIN-S---DTEFALKLAKEESIIVLPG--ITVGL---KDWLRITFA--VEPSAFEIGLGRMKAF 225 (233)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~-~---~~~~~~~ll~~~gi~v~pg--~~f~~---~~~~Rl~~~--~~~~~l~~~~~~l~~~ 225 (233)
+.++.... ... + ..+++.++++++||.+.|+ ..|+. ..++|++++ .+++++++++++|+++
T Consensus 403 -------l~l~~~~~-~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is~~~t~edI~~~~~~l~~~ 474 (481)
T PLN02822 403 -------LHLEKSTG-SAKEDLSLLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVSAGHTESDILKASESLKRV 474 (481)
T ss_pred -------EEeCCCcc-cccchHHHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 54432100 000 1 2467778887899999986 44432 357999877 4899999999999998
Q ss_pred HHHHh
Q 047983 226 YYRHA 230 (233)
Q Consensus 226 l~~~~ 230 (233)
+...-
T Consensus 475 ~~~~~ 479 (481)
T PLN02822 475 AASVL 479 (481)
T ss_pred HHHHh
Confidence 87653
No 110
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=99.78 E-value=1.1e-18 Score=146.82 Aligned_cols=212 Identities=22% Similarity=0.280 Sum_probs=151.5
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCC-cccccccc----C----CccCEEEEccCcccc-CCCCceEEEEEecCCCcc
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNT-HFVPMGVF----G----SIVPVLTLGSISKRW-IVPGWRLGWLVTSDPNGI 70 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~-~~~~~~~~----~----~~~~~i~~~s~sK~~-~~~G~R~G~~~~~~~~~~ 70 (233)
|+|+.+|.++++.|+.||+|++.+|.+. .+.+++.+ . +...++.++|.||.+ |-+|.|-||+-.-+...-
T Consensus 238 e~i~~fa~~~~l~llaDEVYQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~pr 317 (475)
T KOG0258|consen 238 EGIICFAAEEGLVLLADEVYQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNRDPR 317 (475)
T ss_pred HHHHHHHHHcCeEEechHHHHhhccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeecccCChh
Confidence 4789999999999999999999999864 66666543 2 123479999999965 669999999877654333
Q ss_pred ccccchhhhhhhhhHHhhhhhhh--hccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCC
Q 047983 71 LQDLGVAFFHSISLNMRMDDYLL--LSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPE 148 (233)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~ 148 (233)
+.+ .+.+..++.+|........ ..++++.+. -..+ +......+.+...+++|.+.+.+.+++++++.+ .+++
T Consensus 318 v~~-qi~Kl~si~lc~~V~GQ~~vdl~VnPP~Pg--d~Sy--~~~~~Ekd~il~~l~~ra~l~~~~~ns~~gi~c-n~~q 391 (475)
T KOG0258|consen 318 VKQ-QIKKLASIKLCPQVSGQKLVDLVVNPPKPG--DPSY--DLFSSEKDGILSSLRSRAKLTEDAFNSLEGISC-NPVQ 391 (475)
T ss_pred HHH-HHHHHHhhhhcCCccchhhhceecCCCCCC--Ccch--hhhhhhhHhHHHHHHHHhHHHHHHHhhcCceee-ccCc
Confidence 322 2333333333322221111 112222211 1111 112355677888999999999999999999998 8999
Q ss_pred ccEEEEEecCCCccccccccccc-------CCCCChHHHHHHHHhccCEEEECCcccCC---CCcEEEEeecCHHHHHHH
Q 047983 149 GSMFVMYCGSEDKCLLKLNYSLL-------EGINSDTEFALKLAKEESIIVLPGITVGL---KDWLRITFAVEPSAFEIG 218 (233)
Q Consensus 149 ~g~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~ll~~~gi~v~pg~~f~~---~~~~Rl~~~~~~~~l~~~ 218 (233)
|+||++ .++.+|.. .++.+|.-++.++|++.||.++||++||. .-++|.++.... + +.
T Consensus 392 GAMY~f---------P~i~lP~kaie~A~~~~~~PD~FYc~~LLe~tGIcvVPGSGFGQ~~GtyH~R~TiLp~~--~-~~ 459 (475)
T KOG0258|consen 392 GAMYLF---------PQISLPPKAIEAAKALGIAPDEFYCLKLLEATGICVVPGSGFGQKEGTYHFRTTILPPG--L-EI 459 (475)
T ss_pred cceeec---------ccccCCHHHHHHHHHhCCCCcHHHHHHHHHhcCeEEecCCCCCCCCceeEEEEeecCch--h-HH
Confidence 999999 87777642 36678999999999999999999999997 346999998755 5 88
Q ss_pred HHHHHHHHHHHh
Q 047983 219 LGRMKAFYYRHA 230 (233)
Q Consensus 219 ~~~l~~~l~~~~ 230 (233)
+++++++..+..
T Consensus 460 i~~~~~fH~~f~ 471 (475)
T KOG0258|consen 460 IEKFKKFHAEFM 471 (475)
T ss_pred HHHHHHHHHHHH
Confidence 888888877654
No 111
>PLN02483 serine palmitoyltransferase
Probab=99.78 E-value=6.6e-18 Score=151.99 Aligned_cols=192 Identities=14% Similarity=0.112 Sum_probs=125.8
Q ss_pred ChHHHHHHHcCcEEEEccccCccccC--CCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFG--NTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAF 78 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~ 78 (233)
++|+++|++||++||+||+|+...++ |....+...+++.+..|+++||||.|+++| ||+++++ +++
T Consensus 260 ~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs~g~~G---G~i~~~~--~li------- 327 (489)
T PLN02483 260 PEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSFGSCG---GYIAGSK--ELI------- 327 (489)
T ss_pred HHHHHHHHHcCCEEEEECcCccCccCCCCCchHHhcCCCcccCcEEEEecchhcccCc---eEEEcCH--HHH-------
Confidence 37899999999999999999854433 222233334445567899999999999988 9999887 344
Q ss_pred hhhhhhHHhhhhh---hhhccCcchH-H-HHHHHH---hhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCcc
Q 047983 79 FHSISLNMRMDDY---LLLSESVYTT-V-GAVPQI---LEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGS 150 (233)
Q Consensus 79 ~~~~~~~~~~~~~---~~~~~~~~~~-~-~~~~~~---l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g 150 (233)
..++.. ...+.+.++. . .+++++ ......++..+.++.+++|++++.+.|+++ ++.. ..+.++
T Consensus 328 -------~~l~~~~~~~~~~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L~~~-G~~v-~~~~~s 398 (489)
T PLN02483 328 -------QYLKRTCPAHLYATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFFRSELQKM-GFEV-LGDNDS 398 (489)
T ss_pred -------HHHHHhCccccccCCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHHHHC-CCcc-cCCCCC
Confidence 333322 1112111222 1 222222 212222455566889999999999999987 4543 445555
Q ss_pred EEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC----CCcEEEEeec--CHHHHHHHHHHHHH
Q 047983 151 MFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL----KDWLRITFAV--EPSAFEIGLGRMKA 224 (233)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~----~~~~Rl~~~~--~~~~l~~~~~~l~~ 224 (233)
+.+| +.+..+. +..++..+++ ++||.+.| ..|+. .+++|++++. +.+++++++++|.+
T Consensus 399 p~~~---------l~l~~~~-----~~~~~~~~Ll-~~GI~v~~-~~fp~~p~~~~~vRi~isa~~t~edId~~l~~L~~ 462 (489)
T PLN02483 399 PVMP---------IMLYNPA-----KIPAFSRECL-KQNVAVVV-VGFPATPLLLARARICISASHSREDLIKALEVISE 462 (489)
T ss_pred CEEE---------EEECCHH-----HHHHHHHHHH-HCCcEEee-eCCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence 6666 3332211 1345666655 57999997 56632 3789999985 89999999999999
Q ss_pred HHHHH
Q 047983 225 FYYRH 229 (233)
Q Consensus 225 ~l~~~ 229 (233)
+++..
T Consensus 463 ~~~~~ 467 (489)
T PLN02483 463 VGDLV 467 (489)
T ss_pred HHHHh
Confidence 88655
No 112
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.77 E-value=5e-18 Score=150.56 Aligned_cols=196 Identities=16% Similarity=0.121 Sum_probs=124.1
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|+++|++||+++|+||+|+++.+++. ...+ +..+.++.+.||||.++ +|+|+||+++++ ++++. +
T Consensus 223 ~~l~~l~~~~~~~lI~Dev~~g~g~~g~-~~~~---~~~~~~pdi~s~sK~l~-~G~rig~v~~~~--~~~~~--~---- 289 (425)
T PRK08088 223 QRLRALCDEHGIMLIADEVQTGAGRTGT-LFAM---EQMGVAADLTTFAKSIA-GGFPLAGVTGRA--EVMDA--I---- 289 (425)
T ss_pred HHHHHHHHHcCCEEEEeccccCCCcCcc-hhHH---hhcCCCCCEEEEecccc-CCCcceeeEecH--HHHhh--c----
Confidence 3789999999999999999998766542 1121 11223355899999976 899999999987 44432 1
Q ss_pred hhhhHHhhhhhhhhccCcchHHHHHHHHhhhc-HHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCC
Q 047983 81 SISLNMRMDDYLLLSESVYTTVGAVPQILEKT-EEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSE 159 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~ 159 (233)
.......+++.++..+ ++..++++.. .+++++..++..++.++.+.+.++..+.+.. ..+. |+++|
T Consensus 290 -----~~~~~~~t~~~~~~~~-~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~-v~g~-G~~~~----- 356 (425)
T PRK08088 290 -----APGGLGGTYAGNPIAC-AAALAVLKVFEQENLLQKANALGEKLKDGLLAIAEKHPEIGD-VRGL-GAMIA----- 356 (425)
T ss_pred -----CCCCCCCCCCcCHHHH-HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEE-Eecc-ceEEE-----
Confidence 1112222333334443 4444444433 3456677776666666666555555654322 2222 88899
Q ss_pred Ccccccccccc---cCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec--CHHHHHHHHHHHHHHHHHH
Q 047983 160 DKCLLKLNYSL---LEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV--EPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 160 ~~~~~~~~~~~---~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~--~~~~l~~~~~~l~~~l~~~ 229 (233)
+.+..+. .+.. .....+.+.+.++||.+.|+..|+ +.+|++++. +++++++++++|.+.+++.
T Consensus 357 ----l~l~~~~~~~~p~~-~~~~~l~~~~~~~Gv~~~~~~~~~--~~iRl~~~~~~t~~ei~~~i~~l~~~l~~~ 424 (425)
T PRK08088 357 ----IELFEDGDHSKPNA-KLTAQIVARARDKGLILLSCGPYY--NVLRILVPLTIEDAQIRQGLEIIAQCFDEA 424 (425)
T ss_pred ----EEEecCCCCCCCCH-HHHHHHHHHHHhCCCEEecCCCCC--CEEEEECCCCcCHHHHHHHHHHHHHHHHhh
Confidence 5552110 0000 123445555667899998866554 789999993 7999999999999998754
No 113
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.76 E-value=1.2e-17 Score=147.21 Aligned_cols=188 Identities=15% Similarity=0.100 Sum_probs=120.6
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccc--cccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPM--GVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAF 78 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~--~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~ 78 (233)
++|+++|++||+++|+||+|+++.++|.. .+. ..+.++ +.||||.++ +|+|+||+++++ ++++. +
T Consensus 208 ~~l~~l~~~~g~~lI~DEv~~g~g~~g~~-~~~~~~~~~pd-----i~s~sK~l~-~G~rig~vv~~~--~i~~~--l-- 274 (403)
T PRK05093 208 QGLRELCDQHNALLIFDEVQTGMGRTGDL-FAYMHYGVTPD-----ILTSAKALG-GGFPIGAMLTTA--EIASH--F-- 274 (403)
T ss_pred HHHHHHHHHcCCEEEEechhhCCCCCccc-hhhhhcCCCCC-----EEEeccccc-CCcceEEEEEcH--HHHhh--c--
Confidence 37899999999999999999998777642 222 122222 569999988 899999999987 44432 1
Q ss_pred hhhhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCC-Ccccc-cCCCccEEEEEe
Q 047983 79 FHSISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIP-CITCP-KKPEGSMFVMYC 156 (233)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~-~~~~~g~~~~~~ 156 (233)
.......+++.++..+.++.+.+ +.. . -.+.++.++++++.+.+.|++++ ....+ ..+.+|+++|
T Consensus 275 -------~~~~~~~t~~~~~~~~~aa~a~L-~~~-~--~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~G~~~~-- 341 (403)
T PRK05093 275 -------KVGTHGSTYGGNPLACAVAEAVF-DII-N--TPEVLEGVKARRQRFVDGLQKINQKYGVFSEIRGMGLLIG-- 341 (403)
T ss_pred -------CCCCCCCCCCCCHHHHHHHHHHH-HHH-h--hccHHHHHHHHHHHHHHHHHHHHhhCCCeEeEeeCceEEE--
Confidence 11111123333444443334433 211 1 13456788889999999998742 11111 3345689999
Q ss_pred cCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEee--cCHHHHHHHHHHHHHHHHHH
Q 047983 157 GSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFA--VEPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~--~~~~~l~~~~~~l~~~l~~~ 229 (233)
+.++... ..++.+++.+++ ++||.+.|+. .+++|++++ .+++++++++++|.+++.+.
T Consensus 342 -------~~l~~~~---~~~~~~~~~~l~-~~Gv~v~~~g----~~~lRl~~~~~~~~~~i~~~~~~l~~~l~~~ 401 (403)
T PRK05093 342 -------AELKPQY---KGRARDFLNAAA-EEGVMVLVAG----PDVLRFAPSLVIEEADIDEGLARFEKAVAKV 401 (403)
T ss_pred -------EEecCcc---hhHHHHHHHHHH-HCCeEEecCC----CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 5543210 012455665555 5799999843 479999655 48999999999999998754
No 114
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.76 E-value=2e-17 Score=145.10 Aligned_cols=187 Identities=14% Similarity=0.155 Sum_probs=113.9
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|.++|++||++||+||+|++|.+++. ..++...+..++ +.||||.++ +|+|+||+++++ ++++. +
T Consensus 206 ~~l~~l~~~~~~~lI~DE~~~g~g~~g~-~~~~~~~~~~pd---i~t~sK~~~-~G~rig~~~~~~--~~~~~---~--- 272 (396)
T PRK02627 206 QALRELCDENGILLILDEVQTGMGRTGK-LFAYQHYGIEPD---IMTLAKGLG-GGVPIGAVLAKE--KVADV---F--- 272 (396)
T ss_pred HHHHHHHHHcCCEEEEechhcCCCccCc-eeeehhcCCCCC---EEEEcchhh-CCcccEEEEEcH--HHHhc---c---
Confidence 4789999999999999999999876653 222222222223 347999988 899999999987 44431 1
Q ss_pred hhhhHHhhhhhhhhccCcchHHHHHHHHhhhc-HHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCC
Q 047983 81 SISLNMRMDDYLLLSESVYTTVGAVPQILEKT-EEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSE 159 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~ 159 (233)
.......+++.++..+.++.+. ++.. .+++.+..++.....++.+.+.+.+++.+.. . +..|.++|
T Consensus 273 -----~~~~~~~t~~~~~~~~~aa~~~-l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~-~~~g~~~~----- 339 (396)
T PRK02627 273 -----TPGDHGSTFGGNPLACAAALAV-IEIIEEEGLLENAAEVGEYLRAKLRELLEKYPGIKE-V-RGLGLMIG----- 339 (396)
T ss_pred -----CCCCCCCCCCCCHHHHHHHHHH-HHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCeee-e-ccCcEEEE-----
Confidence 1111223344444444333333 3221 2233344444444444444444433433321 2 23578888
Q ss_pred CcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEee--cCHHHHHHHHHHHHHHHHHH
Q 047983 160 DKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFA--VEPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~--~~~~~l~~~~~~l~~~l~~~ 229 (233)
++++ . +..+++.+++ ++||.+.|+. .+++|++++ .+++++++++++|.+++++.
T Consensus 340 ----i~~~--~-----~~~~~~~~l~-~~Gv~v~~~~----~~~lRi~~~~~~~~~~i~~~~~~l~~~l~~~ 395 (396)
T PRK02627 340 ----IELD--R-----PAAEIVKKAL-EKGLLINVTG----DNVLRLLPPLIISKEEIDEAVDRLEEVLKEL 395 (396)
T ss_pred ----EEec--C-----cHHHHHHHHH-HCCeEEeecC----CCEEEEECCcccCHHHHHHHHHHHHHHHHhh
Confidence 5542 1 2556666655 4599999964 378999875 48999999999999988653
No 115
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.76 E-value=1.5e-17 Score=143.73 Aligned_cols=186 Identities=16% Similarity=0.134 Sum_probs=120.5
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCc--cccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTH--FVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAF 78 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~--~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~ 78 (233)
++|+++|+++|++||+||+|..+.++... ..+...+.+++++|+++|+||.|+.+| ||+++++ ++++. +
T Consensus 166 ~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~g---G~~~~~~--~~~~~--~-- 236 (360)
T TIGR00858 166 PQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKALGSYG---AYVAGSQ--ALIDY--L-- 236 (360)
T ss_pred HHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhhhhccC---cEEEcCH--HHHHH--H--
Confidence 47899999999999999999976655321 222333444578999999999999888 9999876 33321 1
Q ss_pred hhhhhhHHhhhhhhhhccCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEec
Q 047983 79 FHSISLNMRMDDYLLLSESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCG 157 (233)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~ 157 (233)
.........+.+.++.. .+..+.++ ...+.+..++.++++++++.+.|+++ ++.. . +.++.++|
T Consensus 237 -------~~~~~~~~~~~~~~~~~~~a~~~al~--~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~-~-~~~~~~~~--- 301 (360)
T TIGR00858 237 -------INRARTLIFSTALPPAVAAAALAALE--LIQEEPWRREKLLALIARLRAGLEAL-GFTL-M-PSCTPIVP--- 301 (360)
T ss_pred -------HHhCccceecCCCCHHHHHHHHHHHH--HHhhCHHHHHHHHHHHHHHHHHHHHc-CCcc-C-CCCCCEEE---
Confidence 11111111122222222 22222221 12234567899999999999999887 4443 3 45677888
Q ss_pred CCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC---CCcEEEEeec--CHHHHHHHHHHH
Q 047983 158 SEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL---KDWLRITFAV--EPSAFEIGLGRM 222 (233)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~---~~~~Rl~~~~--~~~~l~~~~~~l 222 (233)
+.++... ++.++. +.|.++||.+.++..++. .+++|+++.. +++++++++++|
T Consensus 302 ------~~~~~~~-----~~~~~~-~~l~~~gI~v~~~~~~~~~~~~~~iRis~~~~~~~~~i~~~l~~l 359 (360)
T TIGR00858 302 ------VIIGDNA-----SALALA-EELQQQGIFVGAIRPPTVPAGTSRLRLTLSAAHTPGDIDRLAEAL 359 (360)
T ss_pred ------EEeCCHH-----HHHHHH-HHHHHCCeeEeeeCCCCCCCCCceEEEEEcCCCCHHHHHHHHHhh
Confidence 4443211 233444 555677999998776642 4689999995 888999888876
No 116
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.75 E-value=2.7e-17 Score=143.47 Aligned_cols=182 Identities=14% Similarity=0.158 Sum_probs=111.6
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|.++|++|++++|+||+|.+|.+++.. .++......++++ |+||.++ +|+|+||+++++ ++++.+
T Consensus 194 ~~i~~l~~~~~~~~i~De~~~~~~~~g~~-~~~~~~~~~~d~~---t~sK~~~-~G~riG~~~~~~--~~~~~~------ 260 (379)
T TIGR00707 194 KALREICKDKDALLIFDEVQTGIGRTGKF-FAYEHYGIEPDII---TLAKGLG-GGVPIGATLAKE--EVAEAF------ 260 (379)
T ss_pred HHHHHHHHHcCCEEEEeccccCCCccchh-hhHHhcCCCCCEE---EEccccc-CCcccEEEEEcH--HHHhhh------
Confidence 36899999999999999999988765532 2222222223333 7899988 999999999987 444311
Q ss_pred hhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCC-CcccccCCCccEEEEEecCC
Q 047983 81 SISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIP-CITCPKKPEGSMFVMYCGSE 159 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~~~g~~~~~~~~~ 159 (233)
........++.++..+.++.+.+ +.. . ..+.++.++++++.+.+.|+++. .......+..|.++|
T Consensus 261 -----~~~~~~~~~~~~~~~~~aa~aaL-~~~-~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~~----- 326 (379)
T TIGR00707 261 -----TPGDHGSTFGGNPLACAAALAVL-EVI-E--KERLLENVKEKGDYFKERLEELGKNYPNKEVRGKGLMLG----- 326 (379)
T ss_pred -----cCCCCCCCCCCCHHHHHHHHHHH-HHH-H--hhhHHHHHHHHHHHHHHHHHHHHhhCCCCccccCceEEE-----
Confidence 11111122333344443333333 211 1 12355666667777776665531 111011233678888
Q ss_pred CcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEee--cCHHHHHHHHHHHHHH
Q 047983 160 DKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFA--VEPSAFEIGLGRMKAF 225 (233)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~--~~~~~l~~~~~~l~~~ 225 (233)
++++ . +...+.+.|+++||.+.|+. .+++|+++. .+++++++++++|++.
T Consensus 327 ----~~~~--~------~~~~~~~~l~~~Gv~v~~~~----~~~lRi~~~~~~t~~~i~~~~~~l~~~ 378 (379)
T TIGR00707 327 ----IELE--A------PCKDIVKKALEKGLLVNCAG----PKVLRFLPPLIITKEEIDEAVSALEEA 378 (379)
T ss_pred ----EEec--C------cHHHHHHHHHHCCcEEeeCC----CCEEEEECCCcCCHHHHHHHHHHHHHh
Confidence 5443 1 23445555778899999953 479999975 4899999999999875
No 117
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.75 E-value=2.8e-17 Score=143.45 Aligned_cols=181 Identities=14% Similarity=0.179 Sum_probs=112.9
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|.++|++||+++|+||+|.+|.+++.. ..+...+..+. +.|+||.++ +|+|+||+++++ ++.+. .
T Consensus 191 ~~l~~l~~~~~~~lI~DEv~~g~g~~g~~-~~~~~~~~~~d---i~t~sK~l~-~G~~ig~v~~~~--~~~~~---~--- 257 (377)
T PRK02936 191 QEVQTLCKKFGALLIIDEVQTGIGRTGTL-FAYEQFGLDPD---IVTVAKGLG-NGIPVGAMIGKK--ELGTA---F--- 257 (377)
T ss_pred HHHHHHHHHcCCEEEEeccccCCCcCchh-hHHHhhCCCCc---EEEEccccc-CCCccEEEEEcH--HHHhh---c---
Confidence 37899999999999999999998776642 22222222222 337999988 899999999987 34421 1
Q ss_pred hhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhc----CCCcccccCCCccEEEEEe
Q 047983 81 SISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKE----IPCITCPKKPEGSMFVMYC 156 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~~~~~~g~~~~~~ 156 (233)
.......+++.++..+.++.+.+ +.... ....+.++++.+.+.+.|++ ++.+.. ..+ .|+++|
T Consensus 258 -----~~~~~~~t~~~~~~~~aaa~a~l-~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-v~~-~g~~~~-- 324 (377)
T PRK02936 258 -----GPGSHGSTFGGNPLAMAAAKEVL-QVIKQ---PSFLEEVQEKGEYFLQKLQEELEHLECVKN-IRG-KGLMIG-- 324 (377)
T ss_pred -----cCCCCCCCCCCCHHHHHHHHHHH-HHHHh---ccHHHHHHHHHHHHHHHHHHHHhhCCcEEe-Eee-cceEEE--
Confidence 11111122333334443444443 22211 23345566666666666655 232221 223 468899
Q ss_pred cCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEe--ecCHHHHHHHHHHHHHHH
Q 047983 157 GSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITF--AVEPSAFEIGLGRMKAFY 226 (233)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~--~~~~~~l~~~~~~l~~~l 226 (233)
+.++ . +...+.+.|.++||.+.|+. .+++|+++ ..+++++++++++|.+++
T Consensus 325 -------i~~~--~------~~~~~~~~l~~~gv~v~~~g----~~~lRi~p~~~~~~~~i~~~i~~l~~~~ 377 (377)
T PRK02936 325 -------IECT--E------EVAPVIEQLREEGLLVLSAG----PNVIRLLPPLVVTKEELDQAVYLLKKVL 377 (377)
T ss_pred -------EEec--c------hHHHHHHHHHHCCeEEecCC----CCEEEEECCcccCHHHHHHHHHHHHHhC
Confidence 5543 1 34556667788999999853 47999995 458999999999998753
No 118
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.75 E-value=2.1e-17 Score=146.30 Aligned_cols=193 Identities=15% Similarity=0.063 Sum_probs=114.0
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|.++|++||+++|+||+|++|.+++. ...+... +....+.++||.++ +|+|+||+++++ ++++.+
T Consensus 221 ~~l~~lc~~~gillI~DEV~tg~gr~g~-~~a~~~~---~~~pDi~~lsK~l~-~G~pig~v~~~~--~i~~~~------ 287 (420)
T TIGR00700 221 PALLDWCREHGIVFIADEVQTGFARTGA-MFACEHE---GPEPDLITTAKSLA-DGLPLSGVTGRA--EIMDAP------ 287 (420)
T ss_pred HHHHHHHHHcCCEEEEEecccCCcccch-hHHHhhc---CCCCCEEEeecccc-CCcceEEEEecH--HHHhhc------
Confidence 3789999999999999999999977763 2122112 22233557999987 899999999987 444311
Q ss_pred hhhhHHhhhhhhhhccCcchHHHHHHHH--hhh-cHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEec
Q 047983 81 SISLNMRMDDYLLLSESVYTTVGAVPQI--LEK-TEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCG 157 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~ 157 (233)
.......+++.++..++++++.+ ++. ...+...++.+.++++.+.+. +.++.+.. ..+. |.++|
T Consensus 288 -----~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~L~~l~---~~~~~~~~-vrg~-G~~~~--- 354 (420)
T TIGR00700 288 -----APGGLGGTYAGNPLACAAALAVLAIIESEGLIERARQIGRLVTDRLTTLK---AVDPRIGD-VRGL-GAMIA--- 354 (420)
T ss_pred -----CCCCcCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH---hhCCCEEE-eecc-ceEEE---
Confidence 11122234444444443443333 221 123344444444444444333 33444333 4555 56666
Q ss_pred CCCcccccccccc-cCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEee--cCHHHHHHHHHHHHHHHH
Q 047983 158 SEDKCLLKLNYSL-LEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFA--VEPSAFEIGLGRMKAFYY 227 (233)
Q Consensus 158 ~~~~~~~~~~~~~-~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~--~~~~~l~~~~~~l~~~l~ 227 (233)
+.+..+. ..+.......+...+.++||.+.|++.|+ +++|++++ .+++++++++++|.+++.
T Consensus 355 ------i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~p~~~f~--~~lRl~p~l~~~~~~l~~~~~~l~~~l~ 419 (420)
T TIGR00700 355 ------VELVDPGTTEPDAGLAERIATAAHAAGLLLLTCGMFG--NIIRFLPPLTIGDELLSEGLDILCAILA 419 (420)
T ss_pred ------EEEecCCCCCccHHHHHHHHHHHHHCCeEEeccCCCC--CEEEEECCCCcCHHHHHHHHHHHHHHhh
Confidence 3331110 00000112334444568899999988776 79999986 389999999999998874
No 119
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.74 E-value=8.8e-17 Score=143.57 Aligned_cols=197 Identities=16% Similarity=0.170 Sum_probs=121.8
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|.++|++||+++|+||+|.+|.+++. +.++..++.... +.|+||.++ +|+|+||+++++ ++++. .
T Consensus 243 ~~l~~l~~~~gillI~DEV~tg~gr~g~-~~a~~~~~v~pD---i~t~sK~l~-~G~pig~v~~~~--~i~~~---~--- 309 (451)
T PRK06918 243 QEVRNICSEHGILFVADEIQTGFARTGK-YFAIEHFDVVPD---LITVSKSLG-AGVPISGVIGRK--EIMDE---S--- 309 (451)
T ss_pred HHHHHHHHHcCCEEEEeccccCcCccCc-eehhHhcCCCCC---EEeeehhhc-CCCccEEEEEcH--HHHhc---c---
Confidence 3789999999999999999999987763 223333332122 558999977 899999999987 44432 1
Q ss_pred hhhhHHhhhhhhhhccCcchHHHHHH--HHhhh-cHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEec
Q 047983 81 SISLNMRMDDYLLLSESVYTTVGAVP--QILEK-TEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCG 157 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~ 157 (233)
.......+++.++..+.++.+ .++++ ...++.+.+.+.+.++.+.+.+ +.+.+.. ..+.|+++.|
T Consensus 310 -----~~~~~~~T~~g~~l~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~l~~l~~---~~~~~~~-vrg~G~~~~~--- 377 (451)
T PRK06918 310 -----APGELGGTYAGSPLGCAAALAVLDIIEKENLNDRAIELGKVVMNRFEEMKN---KYNCIGD-VRGLGAMCAF--- 377 (451)
T ss_pred -----CCCCcCcCCCcCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHh---hCCCcee-eccceeEEEE---
Confidence 111223344444444433222 22222 2334555555555555554433 2333322 4567899888
Q ss_pred CCCccccccccccc-CCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEee--cCHHHHHHHHHHHHHHHHHHh
Q 047983 158 SEDKCLLKLNYSLL-EGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFA--VEPSAFEIGLGRMKAFYYRHA 230 (233)
Q Consensus 158 ~~~~~~~~~~~~~~-~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~--~~~~~l~~~~~~l~~~l~~~~ 230 (233)
.....+.. .+.......+.+.+.++||.+.|++.|+ +++|++++ .+++++++++++|.+++++..
T Consensus 378 ------~~~~~~~~~~~~~~~~~~l~~~~~~~Gvlv~~~~~~~--~~lrl~p~l~~t~~~id~~l~~l~~~l~~~~ 445 (451)
T PRK06918 378 ------ELVQDRKTKEPDKTLTANICKEANKRGLLLLSAGTYG--NVIRVLMPLVITDEQLEEGLTIIEESLQACY 445 (451)
T ss_pred ------EEccCCCcCCCcHHHHHHHHHHHHHCCeEEeecCCCC--CEEEEECCCccCHHHHHHHHHHHHHHHHHHH
Confidence 22211000 0000123445555678899999987775 78999885 489999999999999998764
No 120
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.73 E-value=8.2e-17 Score=140.44 Aligned_cols=190 Identities=13% Similarity=0.121 Sum_probs=118.9
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCC--CccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGN--THFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAF 78 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~--~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~ 78 (233)
++|+++|++||+++|+||+|+...++. ........+...+++|++.|+||.++.+| ||+++++ ++.+. +.
T Consensus 188 ~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G---g~~~~~~--~~~~~--~~- 259 (385)
T PRK05958 188 AELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKALGSSG---AAVLGSE--TLIDY--LI- 259 (385)
T ss_pred HHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEEechhhcccCC---cEEEcCH--HHHHH--HH-
Confidence 378999999999999999998765542 22222223444567899999999998888 9998876 33321 11
Q ss_pred hhhhhhHHhhhhhhhhccCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEec
Q 047983 79 FHSISLNMRMDDYLLLSESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCG 157 (233)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~ 157 (233)
.....+ ..+.+.++.. .+..+.++.. ... ...++.+.++++.+.+.|+++ ++.. .+|.|+ ++|
T Consensus 260 -------~~~~~~-~~~~~~~~~~~aa~~aal~~~-~~~-~~~~~~~~~~~~~l~~~L~~~-~~~~-~~~~~~-~~~--- 323 (385)
T PRK05958 260 -------NRARPF-IFTTALPPAQAAAARAALRIL-RRE-PERRERLAALIARLRAGLRAL-GFQL-MDSQSA-IQP--- 323 (385)
T ss_pred -------HhCccc-eecCCCCHHHHHHHHHHHHHH-hcC-HHHHHHHHHHHHHHHHHHHHc-CCCc-CCCCCC-EEE---
Confidence 111111 1111222222 2232222211 111 567889999999999999886 3443 456554 556
Q ss_pred CCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccC---CCCcEEEEeec--CHHHHHHHHHHHHHHH
Q 047983 158 SEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVG---LKDWLRITFAV--EPSAFEIGLGRMKAFY 226 (233)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~---~~~~~Rl~~~~--~~~~l~~~~~~l~~~l 226 (233)
+.++... ++.++..+ |.++||.+.++..+. ..+++|+++.. +++++++++++|.+++
T Consensus 324 ------~~~~~~~-----~~~~~~~~-l~~~gI~v~~~~~~~~~~~~~~lRis~~~~~~~~~i~~~l~~l~~~~ 385 (385)
T PRK05958 324 ------LIVGDNE-----RALALAAA-LQEQGFWVGAIRPPTVPAGTSRLRITLTAAHTEADIDRLLEALAEAL 385 (385)
T ss_pred ------EEeCCHH-----HHHHHHHH-HHHCCceEecccCCCCCCCCceEEEEecCCCCHHHHHHHHHHHHhcC
Confidence 4443111 23345544 557799999865543 24799999983 8999999999997653
No 121
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.73 E-value=1.4e-16 Score=139.54 Aligned_cols=191 Identities=16% Similarity=0.124 Sum_probs=117.3
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCC--CccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGN--THFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAF 78 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~--~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~ 78 (233)
++|+++|++||++||+||+|....++. ....+...+.+ +..++++|+||.+ +|+|+||+++++ .+++. +
T Consensus 194 ~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~-~~~i~~~S~sK~~--~g~r~G~v~~~~--~~~~~--l-- 264 (397)
T PRK06939 194 PEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVMD-RVDIITGTLGKAL--GGASGGYTAGRK--EVIDW--L-- 264 (397)
T ss_pred HHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCCC-CCcEEEEECHHHh--CccCceEEEeCH--HHHHH--H--
Confidence 378999999999999999996422222 11112222222 4569999999987 356999999987 34421 1
Q ss_pred hhhhhhHHhhhhhhhhccCcchHH-H-HHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEe
Q 047983 79 FHSISLNMRMDDYLLLSESVYTTV-G-AVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYC 156 (233)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~ 156 (233)
.........+.+..++. . +.+.+ +. . ....+.++.++++++.+.+.|+++ ++.. ..+.++++.+
T Consensus 265 -------~~~~~~~~~~~~~~~~~~~a~~~al-~~-~-~~~~~~~~~~~~~~~~l~~~L~~~-~~~~-~~~~~~~~~~-- 330 (397)
T PRK06939 265 -------RQRSRPYLFSNSLAPAIVAASIKVL-EL-L-EESDELRDRLWENARYFREGMTAA-GFTL-GPGEHPIIPV-- 330 (397)
T ss_pred -------HHhCccccccCCCCHHHHHHHHHHH-HH-H-hcCHHHHHHHHHHHHHHHHHHHHc-CCCc-CCCCCCEEEE--
Confidence 11111111121222222 2 22222 11 1 123577889999999999999887 4443 4566666644
Q ss_pred cCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC----CCcEEEEee--cCHHHHHHHHHHHHHHHHHH
Q 047983 157 GSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL----KDWLRITFA--VEPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~----~~~~Rl~~~--~~~~~l~~~~~~l~~~l~~~ 229 (233)
.++... ++.+++.+++ ++||.+.++. |+. .+++|++++ .+++++++++++|.+++++.
T Consensus 331 --------~~~~~~-----~~~~~~~~L~-~~gI~v~~~~-~~~~~~~~~~iRi~~~~~~~~~~i~~~l~~L~~~~~~~ 394 (397)
T PRK06939 331 --------MLGDAK-----LAQEFADRLL-EEGVYVIGFS-FPVVPKGQARIRTQMSAAHTKEQLDRAIDAFEKVGKEL 394 (397)
T ss_pred --------EECCHH-----HHHHHHHHHH-HCCceEeeeC-CCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHh
Confidence 122111 2455666655 4599999644 432 368999886 38999999999999988764
No 122
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.73 E-value=1.5e-16 Score=139.46 Aligned_cols=184 Identities=11% Similarity=0.100 Sum_probs=114.9
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccc-cccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFV-PMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~-~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|.++|++||+++|+||+|+++.+++.... ....+.++ +.|+||.++ +|+|+||+++++ ++++. .
T Consensus 199 ~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pd-----i~t~sK~l~-~G~~ig~~~~~~--~~~~~---~-- 265 (389)
T PRK01278 199 KGLRQLCDENGLLLIFDEVQCGMGRTGKLFAHEWAGVTPD-----IMAVAKGIG-GGFPLGACLATE--EAAKG---M-- 265 (389)
T ss_pred HHHHHHHHHcCCEEEEeccccCCCcCCcceeecccCCCCC-----EEEEehhcc-CCcceEEEEEcH--HHHhc---c--
Confidence 3789999999999999999999876664221 11122221 458999976 899999999987 34432 1
Q ss_pred hhhhhHHhhhhhhhhccCcchHHHHHHHH--hhhc-HHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEe
Q 047983 80 HSISLNMRMDDYLLLSESVYTTVGAVPQI--LEKT-EEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYC 156 (233)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~ 156 (233)
.......+++.++..++++++.+ ++.. ..++..++.+.++++++.+.+. .+.+.....+ .|.++|
T Consensus 266 ------~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~l~~l~~~---~~~~~~~v~g-~G~~~~-- 333 (389)
T PRK01278 266 ------TPGTHGSTYGGNPLAMAVGNAVLDVILAPGFLDNVQRMGLYLKQKLEGLVDR---FPDVIEEVRG-KGLLLG-- 333 (389)
T ss_pred ------CCCCCCCCCCccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhh---CCCceeeEec-ccEEEE--
Confidence 11222233444444443443333 1111 2345556666666666555332 3322211334 577777
Q ss_pred cCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEee--cCHHHHHHHHHHHHHHHHH
Q 047983 157 GSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFA--VEPSAFEIGLGRMKAFYYR 228 (233)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~--~~~~~l~~~~~~l~~~l~~ 228 (233)
++++. ++.+++.++++ +||.+.|+. .+++|+++. .+++++++++++|.+++++
T Consensus 334 -------i~~~~-------~~~~~~~~l~~-~GV~~~p~~----~~~lR~~p~~~~~~~~i~~~l~~l~~~l~~ 388 (389)
T PRK01278 334 -------LKCVV-------PNRDLVQALRD-EGLLTVGAG----DNVVRLLPPLIITEEEIDEALERLERAAES 388 (389)
T ss_pred -------EEEec-------CHHHHHHHHHH-CCeEEeecC----CCEEEEeCCcccCHHHHHHHHHHHHHHHHh
Confidence 44421 25566666664 599999974 479999864 5899999999999998864
No 123
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.71 E-value=7.7e-17 Score=129.60 Aligned_cols=183 Identities=18% Similarity=0.246 Sum_probs=131.7
Q ss_pred CcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhhhhhhHHhhhh
Q 047983 11 GIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHSISLNMRMDD 90 (233)
Q Consensus 11 ~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (233)
|.++++||+|-+|. | ..+.+.-+..++|++++.+|||.||++|+|+||...+. .+. ++. ++++.
T Consensus 191 nglVVvDEAYidFs--g-~~S~~~lV~kYpNLivlqTlSKsfGLAGiRvG~~~~~~--~ia---~il--------n~~Ka 254 (375)
T KOG0633|consen 191 NGLVVVDEAYIDFS--G-VESRMKLVKKYPNLIVLQTLSKSFGLAGIRVGYGAFPL--SIA---EIL--------NRAKA 254 (375)
T ss_pred CcEEEEeeeeEeec--c-ccccchHhHhCCceeehhhhhhhcCcceeEeecccccH--HHH---HHH--------HhccC
Confidence 79999999999986 3 22345546778999999999999999999999999987 444 344 56655
Q ss_pred hhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCCCcccccccccc
Q 047983 91 YLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSEDKCLLKLNYSL 170 (233)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 170 (233)
-.+++. ....+|++++ ++.....+...++.+.+.+.++...|.+++....+..+..+.|+. +++....
T Consensus 255 PYNiS~--~~s~~AL~Al-s~~n~kkme~~rdaiv~er~RL~keLt~v~~~~~~~gg~daNFiL---------i~v~~~~ 322 (375)
T KOG0633|consen 255 PYNISV--AGSVAALAAL-SDSNGKKMEDVRDAIVRERERLFKELTEVPFLNDYPGGSDANFIL---------IEVTGGD 322 (375)
T ss_pred Cccccc--hhHHHHHHhc-CcccchHHHHHHHHHHHHHHHHHHHhhcCccccCCCCcccccEEE---------EEEcCCC
Confidence 444432 3333677775 333456788999999999999999999987776555666677777 5554221
Q ss_pred cCCCCChHHHHHHHHhccCEEEEC-CcccCCCCcEEEEeecCHHHHHHHHHHHHHH
Q 047983 171 LEGINSDTEFALKLAKEESIIVLP-GITVGLKDWLRITFAVEPSAFEIGLGRMKAF 225 (233)
Q Consensus 171 ~~~~~~~~~~~~~ll~~~gi~v~p-g~~f~~~~~~Rl~~~~~~~~l~~~~~~l~~~ 225 (233)
. ++ +....++.+-++||+|+- |+.-+..+++|++.++++++ .-.++.++++
T Consensus 323 n-~~--akkly~q~at~~gVvVRfrgse~~c~G~lRitvGt~Een-tvL~k~~K~~ 374 (375)
T KOG0633|consen 323 N-GM--AKKLYKQDATKMGVVVRFRGSEEGCKGYLRITVGTPEEN-TVLMKCLKQF 374 (375)
T ss_pred c-HH--HHHHHHHHHHhcceEEEEcCCccccceeEEEEcCCcccc-hHHHHHHHhh
Confidence 0 11 456667777789999975 44434479999999986665 4566666554
No 124
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.70 E-value=4.3e-16 Score=137.95 Aligned_cols=189 Identities=16% Similarity=0.191 Sum_probs=118.3
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHS 81 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~ 81 (233)
+|.++|++||+++|+||+|++|.+++. .......+.... +.++||.++ +|+|+||+++++ ++++. .
T Consensus 223 ~l~~lc~~~g~llI~DEv~tg~gr~g~-~~~~~~~~~~pD---iv~~sK~l~-~G~pigav~~~~--~i~~~---~---- 288 (421)
T PRK06777 223 ALRTLCDEHGILLIADEVQTGFARTGK-LFAMEYYDVKPD---LITMAKSLG-GGMPISAVVGRA--EVMDA---P---- 288 (421)
T ss_pred HHHHHHHHcCCEEEEechhhCCccCCc-hhhhhhcCCCCC---EEeeehhhc-CCCceEEEEEcH--HHHhc---c----
Confidence 689999999999999999999877764 222222332222 337999988 899999999987 44431 1
Q ss_pred hhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhc----CCCcccccCCCccEEEEEec
Q 047983 82 ISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKE----IPCITCPKKPEGSMFVMYCG 157 (233)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~~~~~~g~~~~~~~ 157 (233)
.......+++.++..++++++.+ + ..++ ..+.+.++++.+++.+.|++ .+.+. ...+.|.+|.+.
T Consensus 289 ----~~~~~~~T~~~~p~~~aaa~a~L-~-~~~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~i~-~vrg~G~~~~i~-- 357 (421)
T PRK06777 289 ----APGGLGGTYAGNPLAVAAALAVL-D-VIAE--EKLCQRALILGAHLVEVLEKAKASCPAIV-DIRARGSMVAVE-- 357 (421)
T ss_pred ----CCCCCCCCCCcCHHHHHHHHHHH-H-HHHh--ccHHHHHHHHHHHHHHHHHHHHHhCCCeE-EecCceEEEEEE--
Confidence 11122233444444443444443 2 1111 34556666666666666655 23333 267888888751
Q ss_pred CCCcccccccccccCCCCChH---HHHHHHHhccCEEEECCcccCCCCcEEEEee--cCHHHHHHHHHHHHHHHH
Q 047983 158 SEDKCLLKLNYSLLEGINSDT---EFALKLAKEESIIVLPGITVGLKDWLRITFA--VEPSAFEIGLGRMKAFYY 227 (233)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~---~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~--~~~~~l~~~~~~l~~~l~ 227 (233)
+..+.. +. ++. ..+...+.++||.+.|+..|+ +++|++.. .+++++++++++|.+++.
T Consensus 358 --------~~~~~~-~~-~~~~~~~~l~~~~~~~Gv~i~~~~~~g--~~lr~~ppl~i~~~~i~~~~~~l~~~l~ 420 (421)
T PRK06777 358 --------FNDPQT-GK-PSPEFTRQYQRQALEEGLLLLSCGVHG--NVIRFLYPLTIPDAQFSKALNILTRLLA 420 (421)
T ss_pred --------EecCcc-CC-ccHHHHHHHHHHHHhCCeEEeecCCCC--CEEEEeCCCCCCHHHHHHHHHHHHHHHh
Confidence 211100 00 122 233333567899999987776 79999885 589999999999998873
No 125
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.69 E-value=7.2e-16 Score=136.12 Aligned_cols=194 Identities=13% Similarity=0.122 Sum_probs=120.1
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccC-EEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVP-VLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~-~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|.++|++||+++|+||+|....++..........+..++ .++++|+||.|+++| ||+++++ ++++ .+
T Consensus 198 ~~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div~~tlsK~~g~~G---G~~~~~~--~~~~---~l-- 267 (410)
T PRK13392 198 EAICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQGTLAKAFGCLG---GYIAASA--DLID---FV-- 267 (410)
T ss_pred HHHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccCCCCCcEEEEEChHhhhccc---chhhcCH--HHHH---HH--
Confidence 37899999999999999999954443321111111111122 388999999999999 9999876 3442 11
Q ss_pred hhhhhHHhhhhhhhhccCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecC
Q 047983 80 HSISLNMRMDDYLLLSESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGS 158 (233)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~ 158 (233)
.++.....++.+.++.. .+....++. .+.....++.+.++++++.+.|+++ ++.. .+++++++..
T Consensus 268 ------~~~~~~~~~s~~~~~~~~~a~~aaL~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~~~~~~~i---- 333 (410)
T PRK13392 268 ------RSFAPGFIFTTALPPAVAAGATAAIRH--LKTSQTERDAHQDRVAALKAKLNAN-GIPV-MPSPSHIVPV---- 333 (410)
T ss_pred ------HHhCcchhccCcCCHHHHHHHHHHHHH--HhcCHHHHHHHHHHHHHHHHHHHHc-CCCC-CCCCCCEEEE----
Confidence 22221111233333222 333233322 1223455678899999999999887 5553 4566665522
Q ss_pred CCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccC---CCCcEEEEee--cCHHHHHHHHHHHHHHHHHH
Q 047983 159 EDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVG---LKDWLRITFA--VEPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~---~~~~~Rl~~~--~~~~~l~~~~~~l~~~l~~~ 229 (233)
.++.+. +..++..++++++||.+.|+.... ...++|+++. .++++++.+++.|.+++++.
T Consensus 334 ------~~~~~~-----~~~~~~~~L~~~~GI~v~~~~~p~~~~~~~~lRis~~~~~t~edid~l~~aL~~~~~~~ 398 (410)
T PRK13392 334 ------MVGDPT-----LCKAISDRLMSEHGIYIQPINYPTVPRGTERLRITPTPLHDDEDIDALVAALVAIWDRL 398 (410)
T ss_pred ------EeCCHH-----HHHHHHHHHHHhCCEEEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHc
Confidence 133211 134556666678899999864332 2468999996 48899999999999887653
No 126
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.68 E-value=2.1e-15 Score=132.71 Aligned_cols=195 Identities=17% Similarity=0.127 Sum_probs=123.9
Q ss_pred ChHHHHHHHcCcEEEEcccc-CccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVY-GHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y-~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|+++|++||+++|+|++| .++.+.+..+.++. .. + ++++|+||.+ +|+|.||++++++ .+.++ +
T Consensus 179 ~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~--~~-d--v~~~s~sK~l--~G~~gg~i~~~~~-~~~~~--l--- 245 (402)
T cd00378 179 KRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLP--GA-D--VVTTTTHKTL--RGPRGGLILTRKG-ELAKK--I--- 245 (402)
T ss_pred HHHHHHHHhcCCEEEEEccchhhhhhcccCCCccc--CC-c--EEEeccccCC--CCCCceEEEeccH-HHHHH--H---
Confidence 37899999999999999995 56655553232332 22 2 6899999975 7899999999763 23321 1
Q ss_pred hhhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCC
Q 047983 80 HSISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSE 159 (233)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~ 159 (233)
.+.......+.+......+++..+......+..+.++.++++++.+.+.|+++ ++..+..|.+++++|
T Consensus 246 ------~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~v~----- 313 (402)
T cd00378 246 ------NSAVFPGLQGGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALAEALKER-GFKVVSGGTDNHLVL----- 313 (402)
T ss_pred ------HHHhCccccCCchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhC-CCeEeecCCCCeEEE-----
Confidence 11111111121111121222222211222256677888999999999999887 555433567899999
Q ss_pred CcccccccccccCCCCChHHHHHHHHhccCEEEECC----cccC--CCCcEEEEeec------CHHHHHHHHHHHHHHHH
Q 047983 160 DKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPG----ITVG--LKDWLRITFAV------EPSAFEIGLGRMKAFYY 227 (233)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg----~~f~--~~~~~Rl~~~~------~~~~l~~~~~~l~~~l~ 227 (233)
+.++.. +. +...+.++|+++||.+.++ ..++ ..+++|+++.. +.++++++++.|.+++.
T Consensus 314 ----v~~~~~---~~--~~~~~~~~l~~~gI~v~~~~~p~~~~~~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l~~~~~ 384 (402)
T cd00378 314 ----VDLRPK---GI--TGKAAEDALEEAGITVNKNTLPWDPSSPFVPSGIRIGTPAMTTRGMGEEEMEEIADFIARALK 384 (402)
T ss_pred ----EeCCcc---CC--CHHHHHHHHHHcCcEEcCCcCCCCCCCCCCCCeeEecCHHHHHhCCCHHHHHHHHHHHHHHHh
Confidence 555421 11 3456667788999999763 2221 24689998865 47899999999998775
Q ss_pred HH
Q 047983 228 RH 229 (233)
Q Consensus 228 ~~ 229 (233)
+-
T Consensus 385 ~~ 386 (402)
T cd00378 385 DA 386 (402)
T ss_pred cc
Confidence 43
No 127
>PLN00144 acetylornithine transaminase
Probab=99.68 E-value=1.1e-15 Score=133.71 Aligned_cols=185 Identities=12% Similarity=0.120 Sum_probs=117.4
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccc-cccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFV-PMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~-~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|.++|++||+++|+||+|+.|..++..+. ....+.++ +.||||.+ .+|+|+||+++++ ++.+. +
T Consensus 191 ~~l~~l~~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~PD-----i~t~sK~l-~~G~pig~v~~~~--~~~~~--~--- 257 (382)
T PLN00144 191 QGLRALCDEAGALLVFDEVQCGLGRTGYLWAHEAYGVEPD-----IMTLAKPL-AGGLPIGAVLVTE--KVASA--I--- 257 (382)
T ss_pred HHHHHHHHHcCCEEEEechhhCCCccchHhhhhhcCCCCC-----EEEecccc-cCCcceEEEEEcH--HHHhc--c---
Confidence 3689999999999999999999877764221 24445553 78999994 5799999999987 44431 1
Q ss_pred hhhhhHHhhhhhhhhccCcchHHHHHH--HHhhhc-HHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEe
Q 047983 80 HSISLNMRMDDYLLLSESVYTTVGAVP--QILEKT-EEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYC 156 (233)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~ 156 (233)
.......+++.++..++++.+ .+++++ ..+++.++.+.+ ++.+.+.+.+.+.+.. ... .|+++|
T Consensus 258 ------~~~~~~~T~~~~pl~~aaa~a~l~~i~~~~~~~~~~~~g~~l---~~~l~~~~~~~~~~~~-vrg-~G~~~~-- 324 (382)
T PLN00144 258 ------NPGDHGSTFAGGPLVCNAALAVLDKISKPGFLASVAKKGEYL---RELLRRKLGGNPHVKE-VRG-VGLLVG-- 324 (382)
T ss_pred ------CCCCCCCCCCCCHHHHHHHHHHHHHHhhchHHHHHHHHHHHH---HHHHHHHHhhCCCcee-eec-CceEEE--
Confidence 111122233333333322222 333322 335555555555 3344444555543322 223 799999
Q ss_pred cCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec--CHHHHHHHHHHHHHHHHHH
Q 047983 157 GSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV--EPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~--~~~~l~~~~~~l~~~l~~~ 229 (233)
+.++. +... +...+.++||.+.|+.. .+.+|++++. +++++++++++|.+++.+.
T Consensus 325 -------l~l~~-------~~~~-~~~~~~~~Gv~i~~~~~---~~~lrl~p~~~~~~~~i~~~~~~l~~~l~~~ 381 (382)
T PLN00144 325 -------IQLDV-------PAGP-LVDACRDSGLLVLTAGK---GDVVRLVPPLVISEAELEQAVEILADCLPAL 381 (382)
T ss_pred -------EEecC-------ccHH-HHHHHHHCCeEEeecCC---CCEEEEeCCCccCHHHHHHHHHHHHHHHHhc
Confidence 66632 1334 44556688999998732 4899998884 7999999999999998754
No 128
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.67 E-value=9.5e-16 Score=134.81 Aligned_cols=181 Identities=17% Similarity=0.163 Sum_probs=112.3
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHS 81 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~ 81 (233)
+|.++|++||+++|+||+|.++..++... .....+.... +.++||.++.+|+|+||+++++ ++++. .
T Consensus 211 ~l~~l~~~~g~lli~DEv~~g~g~~g~~~-~~~~~~~~pd---i~~~sK~lg~gg~~ig~~~~~~--~i~~~---~---- 277 (396)
T PRK04073 211 AARELCKEENVLFIADEIQTGLGRTGKLF-ACDWDNVTPD---MYILGKALGGGVFPISCVAANR--DILGV---F---- 277 (396)
T ss_pred HHHHHHHHcCCEEEEecchhCCCcCcHHH-HhhhcCCCCC---EEEecccccCCCCcceEEEEcH--HHHhh---h----
Confidence 68999999999999999999986655321 1111111122 4468999999999999999987 44421 1
Q ss_pred hhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCC--CcccccCCCccEEEEEecCC
Q 047983 82 ISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIP--CITCPKKPEGSMFVMYCGSE 159 (233)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~--~~~~~~~~~~g~~~~~~~~~ 159 (233)
.......+++.++..++++++.+ +...+ ....+..+++++++.+.|+++. .+.. ..+. |.|++
T Consensus 278 ----~~~~~~~t~~~~~~~~aaa~aaL-~~~~~---~~l~~~~~~~~~~l~~~L~~l~~~~i~~-~~~~-g~~~~----- 342 (396)
T PRK04073 278 ----TPGSHGSTFGGNPLACAVSIAAL-EVLEE---EKLPERSLELGEYFKEQLKEIDNPMIKE-VRGR-GLFIG----- 342 (396)
T ss_pred ----cCCCCCCCCCCCHHHHHHHHHHH-HHHHh---cCHHHHHHHHHHHHHHHHHhhcCCcccc-eecc-eEEEE-----
Confidence 11112223343333333444444 21111 2334555667888888887752 2221 3344 56677
Q ss_pred CcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEe--ecCHHHHHHHHHHHHHHH
Q 047983 160 DKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITF--AVEPSAFEIGLGRMKAFY 226 (233)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~--~~~~~~l~~~~~~l~~~l 226 (233)
+.++ . ++.++..+ |.++||.+.|.. .+++|++. ..+++++++++++|.+++
T Consensus 343 ----~~~~--~-----~~~~~~~~-l~~~Gv~~~~~~----~~~iRi~p~l~~t~e~i~~~~~~l~~~l 395 (396)
T PRK04073 343 ----VELN--E-----PARPYCEA-LKEEGLLCKETH----ETVIRFAPPLVITKEELDWAFEKIKAVL 395 (396)
T ss_pred ----EEec--c-----hHHHHHHH-HHHCCeEEecCC----CCEEEEECCcccCHHHHHHHHHHHHHHh
Confidence 4443 1 24445544 567899998732 47999995 458999999999998875
No 129
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.67 E-value=1.4e-15 Score=132.74 Aligned_cols=181 Identities=12% Similarity=0.130 Sum_probs=118.1
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccc-cccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFV-PMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~-~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
+|.++|+++|+++|+||+|.++..++.... ....+.++ +.||||.++ +|+|+||+++++ ++.+. +
T Consensus 190 ~~~~l~~~~~~~~i~De~~~g~g~~g~~~~~~~~~~~pd-----i~t~sK~l~-~G~~ig~~~~~~--~~~~~--~---- 255 (375)
T PRK04260 190 ALADYCQETGILLIVDEVQTGMGRTGKLYAFEHYGIEPD-----IFTLAKGLA-NGVPVGAMLAKS--SLGGA--F---- 255 (375)
T ss_pred HHHHHHHHcCCEEEEechhhCCCcccchhhhHhhCCCCC-----EEEeccccc-CCcceEEEEEcH--HHHhh--c----
Confidence 688999999999999999998765553211 12223332 348999865 799999999987 33321 1
Q ss_pred hhhhHHhhhhhhhhccCcchHHHHHHHHhhhc-HHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCC
Q 047983 81 SISLNMRMDDYLLLSESVYTTVGAVPQILEKT-EEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSE 159 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~ 159 (233)
.......+++.++..+ ++..+.++.. .+++.++.++..+..++.+.+.+.+.+.+. ..+..|+++|
T Consensus 256 -----~~~~~~~t~~~~~~~~-~aa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~g~~~~----- 322 (375)
T PRK04260 256 -----GYGSHGSTFGGNKLSM-AAASATLDIMLTAGFLEQALENGNYLQEQLQKALQDKETVT--TVRGLGYMIG----- 322 (375)
T ss_pred -----CCCCCCCCCCcCHHHH-HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCee--EEeccceEEE-----
Confidence 1111122233333333 4444444332 346778888888888888888877664332 2234799999
Q ss_pred CcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec--CHHHHHHHHHHHHHH
Q 047983 160 DKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV--EPSAFEIGLGRMKAF 225 (233)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~--~~~~l~~~~~~l~~~ 225 (233)
++++ . +...+.+.+.++||.+.|.. .+.+|+++.. +++++++++++|++.
T Consensus 323 ----~~~~--~------~~~~~~~~l~~~Gi~v~~~~----~~~lR~~~~~~~t~~~i~~~l~~l~~~ 374 (375)
T PRK04260 323 ----IETT--A------DLSQLVEAARDKGLIVLTAG----TNVIRLLPPLTLTKEEIEQGIAILSEV 374 (375)
T ss_pred ----EEec--C------cHHHHHHHHHhCCCEEecCC----CCEEEEcCCCccCHHHHHHHHHHHHHh
Confidence 5442 1 33444556667899998852 3789999853 899999999999765
No 130
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.66 E-value=3.9e-15 Score=130.52 Aligned_cols=191 Identities=16% Similarity=0.159 Sum_probs=115.1
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCC--ccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNT--HFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAF 78 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~--~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~ 78 (233)
++|+++|++||++||+||+|....++.. ...+...+. .+..++++|+||.+ +|+|+||+++++ .+++. +
T Consensus 190 ~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~-~~~di~~~s~sK~l--~g~r~G~~~~~~--~~~~~---l- 260 (393)
T TIGR01822 190 DEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVM-GRVDIITGTLGKAL--GGASGGFTTARK--EVVEL---L- 260 (393)
T ss_pred HHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCC-CCCeEEEEEChHHh--hCCCcEEEEeCH--HHHHH---H-
Confidence 4789999999999999999964333221 111122222 24569999999975 478999999886 34421 1
Q ss_pred hhhhhhHHhhhhhhhhccCcchHH--HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEe
Q 047983 79 FHSISLNMRMDDYLLLSESVYTTV--GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYC 156 (233)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~ 156 (233)
........++.+.++.. ++.+++ + ..+..++.++.++++++++.+.|++. ++.. ..+.++++ .
T Consensus 261 -------~~~~~~~~~~~~~~~~~~~a~~~al-~--~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~~~~~~-~-- 325 (393)
T TIGR01822 261 -------RQRSRPYLFSNSLPPAVVGASIKVL-E--MLEASNELRDRLWANTRYFRERMEAA-GFDI-KPADHPII-P-- 325 (393)
T ss_pred -------HHhCccceecCCCCHHHHHHHHHHH-H--HHhcCHHHHHHHHHHHHHHHHHHHHc-CCCC-CCCCCCEE-E--
Confidence 11111111222222222 223332 1 11234677889999999999999876 4543 34444433 3
Q ss_pred cCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC----CCcEEEEeec--CHHHHHHHHHHHHHHHHHH
Q 047983 157 GSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL----KDWLRITFAV--EPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~----~~~~Rl~~~~--~~~~l~~~~~~l~~~l~~~ 229 (233)
+.++... ++.+++..++ ++||.+. +..|+. ..++|++++. +++++++++++|.+++++.
T Consensus 326 -------i~~~~~~-----~~~~l~~~L~-~~gI~v~-~~~~~~~~~~~~~iRis~~~~~t~edi~~~~~~l~~~~~~~ 390 (393)
T TIGR01822 326 -------VMLYDAV-----LAQRFARRLL-EEGIYVT-GFFYPVVPKGQARIRVQISAAHTEEQLDRAVEAFTRIGREL 390 (393)
T ss_pred -------EEeCCHH-----HHHHHHHHHH-HCCeeEe-eeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHh
Confidence 2222111 2445555544 6699998 555542 2468988875 7999999999999987654
No 131
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.66 E-value=2e-15 Score=132.71 Aligned_cols=185 Identities=11% Similarity=0.054 Sum_probs=116.4
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCcc-ccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHF-VPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
+|.++|++||+++|+||+|..|.+++... .....+.+ + +.+|||.++ +|+|+||+++++ ++++. .
T Consensus 208 ~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~p--D---i~t~sK~l~-~G~~ig~~~~~~--~~~~~---~--- 273 (398)
T PRK03244 208 AAREITDRHGALLVLDEVQTGIGRTGAWFAHQHDGVTP--D---VVTLAKGLG-GGLPIGACLAFG--PAADL---L--- 273 (398)
T ss_pred HHHHHHHHcCCEEEEeccccCCcccchHHhhhhhCCCC--C---EEEEchhhh-CCcccEEEEEcH--HHHhh---c---
Confidence 78999999999999999999887665421 12222222 2 348899987 899999999987 34321 1
Q ss_pred hhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccc-cCCCccEEEEEecCC
Q 047983 81 SISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCP-KKPEGSMFVMYCGSE 159 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~g~~~~~~~~~ 159 (233)
.......+++.++..+.++.+. ++.-.+ .+..+.++++.+.+.+.|++++ .... .....|.++|
T Consensus 274 -----~~~~~~~t~~~~~~~~aaa~a~-l~~~~~---~~~~~~~~~~~~~l~~~L~~~~-~~~~~~v~g~g~~~~----- 338 (398)
T PRK03244 274 -----TPGLHGSTFGGNPVACAAALAV-LDTIAS---EGLLENAERLGEQLRAGIEALG-HPLVDHVRGRGLLLG----- 338 (398)
T ss_pred -----cCCCCcCCCCCCHHHHHHHHHH-HHHHHh---ccHHHHHHHHHHHHHHHHHhcC-CCceeeEeeccEEEE-----
Confidence 1111122333333333233333 321111 2345666666777888887752 2110 1223688888
Q ss_pred CcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec--CHHHHHHHHHHHHHHHHHHh
Q 047983 160 DKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV--EPSAFEIGLGRMKAFYYRHA 230 (233)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~--~~~~l~~~~~~l~~~l~~~~ 230 (233)
+.++. +....+.+.+.++||.+.|.. .+.+|+++.. ++++++++++.|.+++.+.+
T Consensus 339 ----i~~~~-------~~~~~~~~~l~~~Gv~~~~~~----~~~iR~~p~~~~t~~~i~~~~~~l~~~l~~~~ 396 (398)
T PRK03244 339 ----IVLTA-------PVAKAVEAAAREAGFLVNAVA----PDVIRLAPPLIITDAQVDAFVAALPAILDAAA 396 (398)
T ss_pred ----EEEec-------cHHHHHHHHHHHCCeEEeecC----CCEEEEECCCcCCHHHHHHHHHHHHHHHHhcc
Confidence 55532 133445555667899998842 3789999764 89999999999999998754
No 132
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.66 E-value=3.5e-15 Score=130.44 Aligned_cols=191 Identities=15% Similarity=0.143 Sum_probs=115.9
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCc--cccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTH--FVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAF 78 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~--~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~ 78 (233)
++|.++|++||+++|+||+|+.+.++... ......+. .++++++.|+||.++++| ||+++++ ++++. +
T Consensus 183 ~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~g---G~~~~~~--~~~~~---~- 252 (385)
T TIGR01825 183 PEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGLE-DKVDIQVGTLSKAIGVVG---GYAAGHK--ELIEY---L- 252 (385)
T ss_pred HHHHHHHHHhCCEEEEECcccccCcCCCCCccHhhcCCC-cCCcEEEEeccHHhhcCC---CEEecCH--HHHHH---H-
Confidence 36899999999999999999887665221 11111223 467899999999998777 9999876 34321 1
Q ss_pred hhhhhhHHhhhhhhhhccCcchH-HHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEec
Q 047983 79 FHSISLNMRMDDYLLLSESVYTT-VGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCG 157 (233)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~ 157 (233)
.........+...++. ..+..+.++. ..++ .+..+.+.++++++.+.|+++ ++.. ..|++.++.+
T Consensus 253 -------~~~~~~~~~~~~~~~~~~~a~~~al~~-~~~~-~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~~~~~~~~--- 318 (385)
T TIGR01825 253 -------KNRARPFLFSTAQPPAVVAALAAAVDE-LQRS-PELMERLWDNTRFFKAGLGKL-GYDT-GGSETPITPV--- 318 (385)
T ss_pred -------HHhCccccccCCCCHHHHHHHHHHHHH-HhcC-HHHHHHHHHHHHHHHHHHHHc-CCCC-CCCCCCEEEE---
Confidence 1111111112112222 1232222221 1111 245667778899999999886 5553 4566554433
Q ss_pred CCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC----CCcEEEEee--cCHHHHHHHHHHHHHHHHHH
Q 047983 158 SEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL----KDWLRITFA--VEPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~----~~~~Rl~~~--~~~~~l~~~~~~l~~~l~~~ 229 (233)
.++... ++.++...++++ ||.+. +..|+. ..++|+++. .+++++++++++|.+++++.
T Consensus 319 -------~~~~~~-----~~~~~~~~L~~~-gi~v~-~~~~~~~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~~~~~ 382 (385)
T TIGR01825 319 -------VIGDEK-----AAQEFSRRLFDE-GIFAQ-SIVFPTVPRGTARIRNIPTAEHTKDDLDQALDAYEKVGKEL 382 (385)
T ss_pred -------EECCHH-----HHHHHHHHHHHC-CcEEc-ccCCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHHHHHh
Confidence 222110 134555555544 99885 445542 368999775 48999999999999988653
No 133
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.65 E-value=3e-15 Score=132.05 Aligned_cols=192 Identities=14% Similarity=0.100 Sum_probs=119.8
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|+++|++||+++|+||+|.++.++|... .....+.... +.|+||.++ +|+|+||+++++ ++++. .
T Consensus 207 ~~l~~l~~~~~~llI~DEv~tG~gr~G~~~-~~~~~~v~pD---i~t~sK~l~-gG~~ig~~~~~~--~~~~~---~--- 273 (406)
T PRK12381 207 QGLRELCDRHNALLIFDEVQTGVGRTGELY-AYMHYGVTPD---VLTTAKALG-GGFPIGAMLTTE--KCASV---M--- 273 (406)
T ss_pred HHHHHHHHHcCCEEEEcchhhCCCCCcchh-hhHhhCCCCC---EEEehhhhh-CCCceEEEEEcH--HHHhh---c---
Confidence 378999999999999999999987766422 2111221111 459999976 799999999987 34421 1
Q ss_pred hhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCC-CcccccCC-CccEEEEEecC
Q 047983 81 SISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIP-CITCPKKP-EGSMFVMYCGS 158 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~-~~g~~~~~~~~ 158 (233)
.......+++.++..++.+.+.+ +. .. ..+.++.++++.+++.+.|+++. ....+..+ ..|.++|
T Consensus 274 -----~~~~~~~t~~~~pl~~aaa~a~l-~~-l~--~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~Gl~~~---- 340 (406)
T PRK12381 274 -----TVGTHGTTYGGNPLASAVAGKVL-EL-IN--TPEMLNGVKQRHDWFVERLNTINARYGLFSEIRGLGLLIG---- 340 (406)
T ss_pred -----CCCCCCCCCCCCHHHHHHHHHHH-HH-Hh--hccHHHHHHHHHHHHHHHHHHHHhhCCCEEEEecCeEEEE----
Confidence 11111222333333332333332 11 11 23467788888888888887742 11111222 3477777
Q ss_pred CCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEee--cCHHHHHHHHHHHHHHHHHHhh
Q 047983 159 EDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFA--VEPSAFEIGLGRMKAFYYRHAK 231 (233)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~--~~~~~l~~~~~~l~~~l~~~~~ 231 (233)
+.++.+. ......+...+.++||.+.+.. .+++|+++. .+++++++++++|.+++.+..+
T Consensus 341 -----~~l~~~~----~~~~~~~~~~l~~~Gv~v~~~g----~~~lRl~p~~~~t~~~i~~~~~~l~~~l~~~~~ 402 (406)
T PRK12381 341 -----CVLNAEY----AGKAKQISQEAAKAGVMVLIAG----PNVVRFAPALNISEEEITTGLDRFARACERFVS 402 (406)
T ss_pred -----EEecCch----hhHHHHHHHHHHHCCcEEeeCC----CCEEEEeCCccCCHHHHHHHHHHHHHHHHHHHh
Confidence 4443210 0134556677778899998642 468999877 4899999999999999988754
No 134
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=99.64 E-value=8.2e-16 Score=128.53 Aligned_cols=193 Identities=17% Similarity=0.221 Sum_probs=121.1
Q ss_pred HHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhhhhhhHH
Q 047983 7 TKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHSISLNM 86 (233)
Q Consensus 7 ~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (233)
++..+..+|.|-+|.+ ++..|+.+..++| |.+.|+||.-|.+|.|+||.++.+. ++.++| .
T Consensus 158 ~~g~~~k~I~D~AYYW-----PhyTpI~~~aD~D--iMLFT~SK~TGHAGSR~GWAlVKD~-~Va~kM-----------~ 218 (363)
T PF04864_consen 158 LNGSSGKVIHDLAYYW-----PHYTPITAPADHD--IMLFTLSKLTGHAGSRFGWALVKDE-EVAKKM-----------T 218 (363)
T ss_dssp STTTEEEEEEE-TT-S-----TTTS---S-B--S--EEEEEHHHHCS-GGG-EEEEEES-H-HHHHHH-----------H
T ss_pred cCCCCcceeeeeeeec-----ccccccCCCCCCc--eEEEEEecccCccccccceeeecCH-HHHHHH-----------H
Confidence 3445667899999998 3445555443333 9999999999999999999999984 333221 2
Q ss_pred hhhhhhhhccCcchHHHH---HHHHhhhcHH-----HHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEec-
Q 047983 87 RMDDYLLLSESVYTTVGA---VPQILEKTEE-----EFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCG- 157 (233)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~---~~~~l~~~~~-----~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~- 157 (233)
.+....+++++.-+|..+ +..++..-.. +.+.--++.+++|.+.|.+.+..-..+..+.- ..-|+.|+.
T Consensus 219 ~y~~lnTiGvS~dsQLRa~kiLk~v~~~~~~~~~~~~~F~f~~~~M~~RW~~L~~~~~~S~rFSLq~~--~~~yC~ff~~ 296 (363)
T PF04864_consen 219 KYMELNTIGVSRDSQLRALKILKVVLDGYGTEKGTEDIFHFGYSTMRERWEKLRAAVSASKRFSLQKF--SPQYCNFFKR 296 (363)
T ss_dssp HHHHHHCSS--HHHHHHHHHHHHHHHHHCCHHTTTTSHHHHHHHHHHHHHHHHHHHHCCSSSEEE-----SCEEETTTTC
T ss_pred HHHHHhcccCcHHHHHHHHHHHHHHHhcccCCCCccchHHHHHHHHHHHHHHHHHHHHhcCceecCcC--Cchhcccccc
Confidence 333344566667777632 3333322111 48888999999999999999977433332111 122332222
Q ss_pred --CCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC-CCcEEEEeecCHHHHHHHHHHHHHH
Q 047983 158 --SEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL-KDWLRITFAVEPSAFEIGLGRMKAF 225 (233)
Q Consensus 158 --~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~-~~~~Rl~~~~~~~~l~~~~~~l~~~ 225 (233)
.|.|...++.+.. ++.+.++..|+++||.-+.|..||. ..|+|+|+...+++++..++||.++
T Consensus 297 ~~~psPafAWlkCe~-----eed~DC~~~l~~~~I~tr~G~~fga~~ryVRlSml~~~d~Fd~l~~rL~~l 362 (363)
T PF04864_consen 297 VREPSPAFAWLKCER-----EEDEDCYAVLREAKIITRSGVLFGADSRYVRLSMLKRDDDFDQLLERLSKL 362 (363)
T ss_dssp EEE---SEEEEEESS-----CGGSSHHHHHHCTTEEEEEGGGGTS-TTEEEEESSS-HHHHHHHHHHHHCC
T ss_pred ccCCCCCeEEEecCC-----cccccHHHHHHhCCcccCCCCccCCCCCeEEEeccCCHHHHHHHHHHHHhh
Confidence 2223333377754 2456788889999999999999997 6899999999999999999999754
No 135
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.64 E-value=7.7e-15 Score=129.41 Aligned_cols=193 Identities=17% Similarity=0.102 Sum_probs=118.0
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCC-ccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGS-IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|.++|++||++||+||+|+...++..........+. .+..|+++||||.||++| ||+++++ ++++. .
T Consensus 198 ~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G---G~~~~~~--~~~~~---l-- 267 (407)
T PRK09064 198 AEICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEGTLAKAFGVMG---GYIAGSA--ALVDA---V-- 267 (407)
T ss_pred HHHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCCCCCeEEEEecchhhhccC---ceEecCH--HHHHH---H--
Confidence 47899999999999999999844343221111111121 234688999999999999 9999876 34421 1
Q ss_pred hhhhhHHhhhhhhhhccCcchHH--HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEec
Q 047983 80 HSISLNMRMDDYLLLSESVYTTV--GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCG 157 (233)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~ 157 (233)
........++.+.++.. ++.+.+ + .-+.....++.++++++++.+.|+++ ++.. .++.++ +++
T Consensus 268 ------~~~~~~~~~t~~~~~~~~~aa~~al-~--~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~~~~-iv~--- 332 (407)
T PRK09064 268 ------RSYAPGFIFTTSLPPAIAAAALASI-R--HLKESNEERERHQERAAKLKAALDAA-GIPV-MPNESH-IVP--- 332 (407)
T ss_pred ------HHhCccccccCcCCHHHHHHHHHHH-H--HHhcCHHHHHHHHHHHHHHHHHHHHc-CCCC-CCCCCC-EEE---
Confidence 11111111222233222 333332 1 11112345688899999999999886 4543 344444 445
Q ss_pred CCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC---CCcEEEEeec--CHHHHHHHHHHHHHHHHHH
Q 047983 158 SEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL---KDWLRITFAV--EPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~---~~~~Rl~~~~--~~~~l~~~~~~l~~~l~~~ 229 (233)
+.++... +..++..++++++||.+.+...... .+++|+++.. ++++++++++.|.+++++.
T Consensus 333 ------i~~~~~~-----~~~~l~~~L~~~~gi~v~~~~~p~~~~~~~~lRis~~~~~t~edi~~l~~~l~~~~~~~ 398 (407)
T PRK09064 333 ------VMVGDPE-----KCKKASDMLLEEHGIYVQPINYPTVPRGTERLRITPTPFHTDEMIDHLVEALVEVWARL 398 (407)
T ss_pred ------EEeCCHH-----HHHHHHHHHHHhCCEEEeeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Confidence 3332110 1345555566677999998643321 3689999884 8899999999999988754
No 136
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.63 E-value=5.3e-15 Score=131.12 Aligned_cols=201 Identities=13% Similarity=0.119 Sum_probs=114.9
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHS 81 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~ 81 (233)
+|.++|++||+++|+||+|.++.++.........+.+ + +.+|||.++ +|+|+||+++++ ++++.+.-.
T Consensus 220 ~l~~l~~~~~~llI~DEv~~g~r~g~~~~~~~~~~~p-D----i~t~sK~l~-~G~pig~v~~~~--~i~~~~~~~---- 287 (423)
T TIGR00713 220 GLRALTEEYGSLLIFDEVMTGFRVALGGAQEYFGVEP-D----LTTLGKIIG-GGLPVGAFGGRR--EIMERLAPE---- 287 (423)
T ss_pred HHHHHHHHhCCEEEEEccccccccCcchhHHHhCCCc-c----hhhhhhhhc-CCCceeeeeEHH--HHHHhhCcC----
Confidence 6899999999999999999998543222222222233 2 348999987 899999999987 444311000
Q ss_pred hhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCCCc
Q 047983 82 ISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSEDK 161 (233)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~ 161 (233)
.......+++.++..++++++.+-......+.+..++.....++.+.+.+++.+ +.....+.|+++...+..+..
T Consensus 288 ----~~~~~~~T~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~v~~~g~~~~v~~~~~~~ 362 (423)
T TIGR00713 288 ----GPVYQAGTLSGNPLAMAAGLATLKLLDEEGVYTELDELAKRLAEGLSEVLEDTG-IPHTVNRVGSMFSLFFTEEEV 362 (423)
T ss_pred ----CCeeeccCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEEeeccEEEEEEecCCC
Confidence 011122233333344334444431111223667777777777888887777763 321123455555531111100
Q ss_pred ccccccccccCCCCChH--HHHHHHHhccCEEEECCcccCCCCcEEEEeecCHHHHHHHHHHHHHHHHH
Q 047983 162 CLLKLNYSLLEGINSDT--EFALKLAKEESIIVLPGITVGLKDWLRITFAVEPSAFEIGLGRMKAFYYR 228 (233)
Q Consensus 162 ~~~~~~~~~~~~~~~~~--~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~~~~~l~~~~~~l~~~l~~ 228 (233)
... ... ...++. ..+...+.++||.+.++ .| +.+|++...+++++++++++|.+++++
T Consensus 363 ~~~----~~~-~~~~~~~~~~~~~~l~~~Gv~v~~~-~~---~~~~l~~~~t~~~i~~~~~~l~~~l~~ 422 (423)
T TIGR00713 363 TNY----ADA-KKSDTELFAKFFHEMLDKGVFLPPS-QF---EACFLSAAHTEEDIENTIEAAEEVFAE 422 (423)
T ss_pred CCh----hhh-hcccHHHHHHHHHHHHHCCeEEecC-Cc---cceeeECCCCHHHHHHHHHHHHHHHhh
Confidence 000 000 000111 23344445689998754 33 357888878999999999999998864
No 137
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.61 E-value=2.8e-14 Score=125.72 Aligned_cols=193 Identities=17% Similarity=0.122 Sum_probs=117.4
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCC-ccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGS-IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|.++|++||+++|+||+|+...++..........+. .+..++++||||.|+.+| ||+++++ ++++. +
T Consensus 197 ~~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G---G~i~~~~--~~~~~---l-- 266 (402)
T TIGR01821 197 EEICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAKAFGVVG---GYIAASR--KLIDA---I-- 266 (402)
T ss_pred HHHHHHHHHcCCEEEEeCcccccccCCCCCccchhccCCCCCeEEEEechhhhccCC---ceeecCH--HHHHH---H--
Confidence 47899999999999999999954443221111111111 234588899999999999 9999886 34421 1
Q ss_pred hhhhhHHhhhhhhhhccCcchHH--HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEec
Q 047983 80 HSISLNMRMDDYLLLSESVYTTV--GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCG 157 (233)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~ 157 (233)
........++.+.++.. ++.+.+ +. ..+. ...++.++++++++.+.|+++ ++.. .++.+++ +.
T Consensus 267 ------~~~~~~~~~t~~~~~~~~aaa~aaL-~~-~~~~-~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~~~~i-~~--- 331 (402)
T TIGR01821 267 ------RSYAPGFIFTTSLPPAIAAGATASI-RH-LKES-QDLRRAHQENVKRLKNLLEAL-GIPV-IPNPSHI-VP--- 331 (402)
T ss_pred ------HHhCcCceecCcCCHHHHHHHHHHH-HH-hhcC-HHHHHHHHHHHHHHHHHHHHc-CCCc-CCCCCCE-EE---
Confidence 11111111222233322 333343 21 1111 445666778899999999887 4543 4555554 44
Q ss_pred CCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccC---CCCcEEEEeec--CHHHHHHHHHHHHHHHHHH
Q 047983 158 SEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVG---LKDWLRITFAV--EPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~---~~~~~Rl~~~~--~~~~l~~~~~~l~~~l~~~ 229 (233)
+.++.+. ...++..++++++||.+.|..... ..+++|+++.. ++++++++++.|.+++++.
T Consensus 332 ------i~~~~~~-----~a~~~~~~L~~~~Gi~v~~~~~p~~~~g~~~lRis~~~~~t~edi~~~~~~l~~~~~~~ 397 (402)
T TIGR01821 332 ------VIIGDAA-----LCKKVSDLLLNKHGIYVQPINYPTVPRGTERLRITPTPAHTDKMIDDLVEALLLVWDRL 397 (402)
T ss_pred ------EEeCCHH-----HHHHHHHHHHhcCCEEEEeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Confidence 2232110 134555555667799998854322 14689999974 8999999999999988764
No 138
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.61 E-value=2.1e-14 Score=126.23 Aligned_cols=190 Identities=16% Similarity=0.198 Sum_probs=109.3
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCcc-ccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHF-VPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
+|.++|++||+++|+||+|..+.++|... .....+.+ .++ ++||.++.+++|+||+++++ ++++. +
T Consensus 203 ~l~~l~~~~~~lli~Dev~~g~g~~G~~~~~~~~~~~p--d~~---~~sK~l~~g~~~ig~v~~~~--~~~~~---~--- 269 (400)
T PTZ00125 203 QVYELCKKYNVLLIVDEIQTGLGRTGKLLAHDHEGVKP--DIV---LLGKALSGGLYPISAVLAND--DVMLV---I--- 269 (400)
T ss_pred HHHHHHHHcCCEEEEeccccCCCccchhhHHHhcCCCC--CEE---EEcccccCCCcCcEEEEEcH--HHHhh---c---
Confidence 68999999999999999999876665321 11122222 233 57899877667999999987 44421 1
Q ss_pred hhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhc----CCCcccccCCCccEEEEEe
Q 047983 81 SISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKE----IPCITCPKKPEGSMFVMYC 156 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~~~~~~g~~~~~~ 156 (233)
.......+++.++..+.++.+.+ +.-.++ ...+..+++.+.+.+.|++ .+.... ..+ .|.+.|
T Consensus 270 -----~~~~~~~t~~~~~~~~~aa~~~l-~~i~~~---~~~~~~~~~~~~l~~~l~~l~~~~~~~~~-~~~-~g~~~~-- 336 (400)
T PTZ00125 270 -----KPGEHGSTYGGNPLACAVAVEAL-EVLKEE---KLAENAQRLGEVFRDGLKELLKKSPWVKE-IRG-KGLLNA-- 336 (400)
T ss_pred -----cCCCCCCCCCcCHHHHHHHHHHH-HHHHhc---CHHHHHHHHHHHHHHHHHHHHhcCCCeEE-Eec-ccEEEE--
Confidence 11111122333333332332322 111111 1223333344444444443 222221 334 466777
Q ss_pred cCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEee--cCHHHHHHHHHHHHHHHHHHhhc
Q 047983 157 GSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFA--VEPSAFEIGLGRMKAFYYRHAKK 232 (233)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~--~~~~~l~~~~~~l~~~l~~~~~~ 232 (233)
+.++.+. +. +..++..++ .++||.+.|+. .+++|++.. .+++++++++++|.+++.++..+
T Consensus 337 -------v~~~~~~--~~-~~~~~~~~l-~~~Gv~v~~~~----~~~lRi~~~~~~~~~~i~~~l~~l~~~l~~~~~~ 399 (400)
T PTZ00125 337 -------IVFDHSD--GV-NAWDLCLKL-KENGLLAKPTH----DNIIRFAPPLVITKEQLDQALEIIKKVLKSFDSN 399 (400)
T ss_pred -------EEEccCc--ch-HHHHHHHHH-HHCCeEEeecC----CCEEEEECCccCCHHHHHHHHHHHHHHHHHHhcC
Confidence 4443211 11 234455554 47799999863 479999954 58999999999999999987654
No 139
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.60 E-value=2.3e-14 Score=126.95 Aligned_cols=192 Identities=16% Similarity=0.165 Sum_probs=115.3
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|.++|++||+++|+||+|++|.+++.. ..+..++.... +.|+||.++ +|+|+||+++++ ++++. +
T Consensus 222 ~~l~~lc~~~g~llI~DEv~tg~gr~G~~-~a~~~~~~~pD---i~t~gK~l~-~G~pigav~~~~--~i~~~--~---- 288 (421)
T PRK09792 222 AAIRRLCDEHGIVMIADEVQSGFARTGKL-FAMDHYADKPD---LMTMAKSLA-GGMPLSGVVGNA--NIMDA--P---- 288 (421)
T ss_pred HHHHHHHHHcCCEEEEeccccCCCCCCch-hHHHhcCCCCc---EEEeehhhc-CCCceEEEEEcH--HHHhc--c----
Confidence 36899999999999999999999777642 33333322111 679999965 799999999987 44431 1
Q ss_pred hhhhHHhhhhhhhhccCcchHHHHHHH--HhhhcHHHHHHHHHHHHHHHHHHHHHHhhc-CCCcccccCCCc-cEEEEEe
Q 047983 81 SISLNMRMDDYLLLSESVYTTVGAVPQ--ILEKTEEEFFSKITDILREAADICCDRLKE-IPCITCPKKPEG-SMFVMYC 156 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~-g~~~~~~ 156 (233)
.......+++.++..++++.+. +++ ..+++++.+ .+.++.....+.|.+ ++.+ ..+.| |.++|
T Consensus 289 -----~~~~~~~T~~gnpl~~aaa~a~l~~l~--~~~~~~~~~-~~g~~l~~~l~~l~~~~p~v---~~vrG~Gl~~~-- 355 (421)
T PRK09792 289 -----APGGLGGTYAGNPLAVAAAHAVLNIID--KESLCERAN-QLGQRLKNTLIDAKESVPAI---AAVRGLGSMIA-- 355 (421)
T ss_pred -----CCCCcCCCCCCCHHHHHHHHHHHHHHH--hhhHHHHHH-HHHHHHHHHHHHHHHhCCCc---ceecccceEEE--
Confidence 1111222333334443333332 222 224444444 444444444444533 5432 45777 99999
Q ss_pred cCCCccccccccccc-CCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec--CHHHHHHHHHHHHHHHH
Q 047983 157 GSEDKCLLKLNYSLL-EGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV--EPSAFEIGLGRMKAFYY 227 (233)
Q Consensus 157 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~--~~~~l~~~~~~l~~~l~ 227 (233)
+.++.+.. .........+...+.++||.+.+.+.+ .+.+|+..+. +++++++++++|.+++.
T Consensus 356 -------ie~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~g~~--~~~irl~P~l~i~~~ei~~~~~~l~~~l~ 420 (421)
T PRK09792 356 -------AEFNDPQTGEPSAAIAQKIQQRALAQGLLLLTCGAY--GNVIRFLYPLTIPDAQFDAAMKILQDALS 420 (421)
T ss_pred -------EEecCCccCCcchHHHHHHHHHHHHCCcEEeecCCC--CCEEEEeCCCcCCHHHHHHHHHHHHHHHh
Confidence 55532110 000012344555566789999643221 4789998663 89999999999998874
No 140
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.60 E-value=7e-15 Score=129.64 Aligned_cols=192 Identities=18% Similarity=0.183 Sum_probs=107.7
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|.++|++||+++|+||+|+.+...+... .....+... .+.|+||.++. |+|+||+++++ ++++.+. .
T Consensus 215 ~~l~~l~~~~~~~li~Dev~~g~g~~g~~~-~~~~~~~~~---d~~t~sK~l~~-g~~~g~~~~~~--~~~~~~~-~--- 283 (413)
T cd00610 215 KALRELCRKHGILLIADEVQTGFGRTGKMF-AFEHFGVEP---DIVTLGKGLGG-GLPLGAVLGRE--EIMDAFP-A--- 283 (413)
T ss_pred HHHHHHHHHcCCEEEEeccccCCCcCcchh-hHhhcCCCC---CeEEEcccccC-ccccEEEEEcH--HHHHhhc-c---
Confidence 378999999999999999999875444321 111112111 24589999876 89999999976 3442110 0
Q ss_pred hhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCC---CcccccCCCccEEEEEec
Q 047983 81 SISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIP---CITCPKKPEGSMFVMYCG 157 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~---~~~~~~~~~~g~~~~~~~ 157 (233)
.......+++.++..+.++.+.+ +. ..+ ....+.++++.+.+.+.|+++. .......+ .|.++|
T Consensus 284 -----~~~~~~~t~~~~~~~~~a~~a~l-~~-l~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~-~g~~~~--- 350 (413)
T cd00610 284 -----GPGLHGGTFGGNPLACAAALAVL-EV-LEE--EGLLENAAELGEYLRERLRELAEKHPLVGDVRG-RGLMIG--- 350 (413)
T ss_pred -----CCCCCCCCCCcCHHHHHHHHHHH-HH-HHh--ccHHHHHHHHHHHHHHHHHHHHhhCCcEEEeec-CceEEE---
Confidence 11111122333333332333222 11 111 2445566666666666665531 11111223 456666
Q ss_pred CCCccccccccccc--CCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec--CHHHHHHHHHHHHHHH
Q 047983 158 SEDKCLLKLNYSLL--EGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV--EPSAFEIGLGRMKAFY 226 (233)
Q Consensus 158 ~~~~~~~~~~~~~~--~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~--~~~~l~~~~~~l~~~l 226 (233)
+.++.... .........+.+.|.++||.+.|++ .+++|++++. +++++++++++|.+++
T Consensus 351 ------~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~~~~----~~~lR~~~~~~~t~~~i~~~~~~l~~~l 413 (413)
T cd00610 351 ------IELVKDRATKPPDKELAAKIIKAALERGLLLRPSG----GNVIRLLPPLIITEEEIDEGLDALDEAL 413 (413)
T ss_pred ------EEEecCCCcCCcchHHHHHHHHHHHHCCeEEeecC----CCEEEEECCCcCCHHHHHHHHHHHHHhC
Confidence 33332100 0000133445555667899999975 4789998774 7899999999998753
No 141
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.60 E-value=4.5e-14 Score=121.58 Aligned_cols=187 Identities=18% Similarity=0.138 Sum_probs=114.4
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCc-cccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTH-FVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~-~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|+++|+++|+++|+||+|....++... ..........++.++++|+||.++.+| ||+++++ .++
T Consensus 152 ~~i~~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g---G~i~~~~--~~~-------- 218 (349)
T cd06454 152 PELVDLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGAVG---GYIAGSK--ELI-------- 218 (349)
T ss_pred HHHHHHHHHcCCEEEEEccccccccCCCCCChhhhccccccCcEEEeechhhhcccC---CEEECCH--HHH--------
Confidence 47899999999999999999854332211 111111234466899999999998777 9999876 333
Q ss_pred hhhhhHHhhhhh---hhhccCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEE
Q 047983 80 HSISLNMRMDDY---LLLSESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMY 155 (233)
Q Consensus 80 ~~~~~~~~~~~~---~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~ 155 (233)
..+... ...+.+.+... .++...++.. .+ .+..++++.++++.+.+.|+++ ++.. ..+.++++.+
T Consensus 219 ------~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-~~-~~~~~~~~~~~~~~l~~~l~~~-g~~~-~~~~~~~~~~- 287 (349)
T cd06454 219 ------DYLRSYARGFIFSTSLPPAVAAAALAALEVL-QG-GPERRERLQENVRYLRRGLKEL-GFPV-GGSPSHIIPP- 287 (349)
T ss_pred ------HHHHHhchhhhccCCCCHHHHHHHHHHHHHH-hc-CHHHHHHHHHHHHHHHHHHHhc-CCcc-cCCCCCcEEE-
Confidence 222211 11122222222 2222222211 11 4667889999999999999886 4443 3343455455
Q ss_pred ecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC---CCcEEEEeec--CHHHHHHHHHHHHHH
Q 047983 156 CGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL---KDWLRITFAV--EPSAFEIGLGRMKAF 225 (233)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~---~~~~Rl~~~~--~~~~l~~~~~~l~~~ 225 (233)
+.++.. .+.+.+.+.|.++||.+.++..... .+++|+++.. +++++++++++|+++
T Consensus 288 --------~~~~~~------~~~~~~~~~L~~~gI~~~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 288 --------LIGDDP------AKAVAFSDALLERGIYVQAIRYPTVPRGTARLRISLSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred --------EeCCCh------HHHHHHHHHHHhCCceEEEecCCccCCCCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 222111 1334455555566999998643221 4789999984 899999999999764
No 142
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.60 E-value=5.3e-14 Score=122.68 Aligned_cols=191 Identities=13% Similarity=0.084 Sum_probs=114.4
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|+++|+++|+++|+||+|.....+ .+.. .. +..++++|+||.++ +|.|+||+++++ ++++.+ .
T Consensus 166 ~~i~~la~~~~~~livDea~~~g~~~----~~~~--~~-~~di~v~s~sK~~~-~~g~~G~l~~~~--~~i~~l--~--- 230 (370)
T TIGR02539 166 GKVAKVCREKGVPLLLNCAYTVGRMP----VSAK--EI-GADFIVGSGHKSMA-ASGPCGVLGMSE--EWEDIV--L--- 230 (370)
T ss_pred HHHHHHHHHcCCeEEEECccccCCcC----CCHH--Hc-CCCEEEeeCccccc-CCCCEEEEEECH--HHHhhh--c---
Confidence 37899999999999999999974211 1111 11 23367799999987 577899999987 455421 1
Q ss_pred hhhhHHhhhhhhhh-------ccCc-chHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccc-cCCCccE
Q 047983 81 SISLNMRMDDYLLL-------SESV-YTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCP-KKPEGSM 151 (233)
Q Consensus 81 ~~~~~~~~~~~~~~-------~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~g~ 151 (233)
.......+ +... .....+.+++ ....+++...++.++++ +++.+.|+++ ++..+ ..|..+.
T Consensus 231 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~al--~~~~~~l~~~~~~~~~~-~~l~~~L~~~-g~~~~~~~~s~t~ 300 (370)
T TIGR02539 231 ------RKSRYSPVKEVELLGCTSRGAPIVTMMASF--PHVVERVKRWDEEVKKT-RWFVAELEDI-GFIQLGQKPKEHD 300 (370)
T ss_pred ------ccccCCccceeeeecccccccHHHHHHHHH--HHHHHHHHHHHHHHHHH-HHHHHHHHhC-CcEEEccCCCcCc
Confidence 11110000 1111 1111223332 11244555555555554 5899999887 44321 2356688
Q ss_pred EEEEecCCCccccccccccc--CCCCChHHHHHHHHhccCEE-EECCcccCCCCcEEEEee-cCHHHHHHHHHHHHHHHH
Q 047983 152 FVMYCGSEDKCLLKLNYSLL--EGINSDTEFALKLAKEESII-VLPGITVGLKDWLRITFA-VEPSAFEIGLGRMKAFYY 227 (233)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ll~~~gi~-v~pg~~f~~~~~~Rl~~~-~~~~~l~~~~~~l~~~l~ 227 (233)
|++ ++++.-.. .+.......+.+.|+++||. +.| +.++++|+++. .++++++++++.|+++++
T Consensus 301 ~v~---------~~~~~~~~~~~~~~~~~~~~~~~L~e~GI~~ir~----~~~~~iRis~~~~t~e~i~~l~~~L~~~~~ 367 (370)
T TIGR02539 301 LVK---------FETPGFHEIAQKHKRRGYFLYEELKKRGIHGIRS----GQTKYFKLSVYGLTKEQVEYVVDSFEEIVE 367 (370)
T ss_pred eEE---------EECCchhHHhhhhccccHHHHHHHHhCCCccccC----CcceEEEEEecCCCHHHHHHHHHHHHHHHH
Confidence 887 44431000 00011335677777888997 554 33579999963 388999999999998876
Q ss_pred HH
Q 047983 228 RH 229 (233)
Q Consensus 228 ~~ 229 (233)
++
T Consensus 368 ~~ 369 (370)
T TIGR02539 368 EY 369 (370)
T ss_pred hc
Confidence 53
No 143
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.59 E-value=3.3e-14 Score=120.60 Aligned_cols=187 Identities=18% Similarity=0.197 Sum_probs=117.9
Q ss_pred HHcCcEEEEccccCccccCCC-ccc---cccc----cCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 8 KKLGIMVIADEVYGHLVFGNT-HFV---PMGV----FGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 8 ~~~~~~lI~De~y~~~~~~~~-~~~---~~~~----~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
...|..|+.|++|.-..+.+. +.. .+.. .+..++++.+.|.||. ..||..+++++++. +-+
T Consensus 204 AA~DFRI~WDNAY~vHhL~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKI-Tf~GaGva~~aaS~--~Nl-------- 272 (425)
T PF12897_consen 204 AAPDFRIFWDNAYAVHHLYDEEPRDALLNILDACAKAGNPDRVYVFASTSKI-TFPGAGVAFFAASE--ANL-------- 272 (425)
T ss_dssp SSTT-EEEEE-TTTT-BSSSSSS------HHHHHHHTT-TTSEEEEEESTTT-S-TTSS-EEEEE-H--HHH--------
T ss_pred CCcCeEEEeecCceEeeccccccchhhhHHHHHHHHcCCCCeEEEEeccccc-ccCCcceeeeecCH--HHH--------
Confidence 356999999999996666322 211 2222 2446889999999998 88999999999998 222
Q ss_pred hhhhhHHhhhhh---hhhccCcchHHHHHHHHhhh---cHHHHHHHHHHHHHHHHHHHHHHhhc-CC---CcccccCCCc
Q 047983 80 HSISLNMRMDDY---LLLSESVYTTVGAVPQILEK---TEEEFFSKITDILREAADICCDRLKE-IP---CITCPKKPEG 149 (233)
Q Consensus 80 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~~~~l~~~L~~-~~---~~~~~~~~~~ 149 (233)
..++.. .+++..-..|. .-..++++ +..+|+++.++.++-+++.+.+.|++ ++ ++..|..|.|
T Consensus 273 ------~~~~~~~~~~tIgpdKvNQL-RHvrff~d~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~G 345 (425)
T PF12897_consen 273 ------AWIKKHLSVQTIGPDKVNQL-RHVRFFKDAEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGLGIASWTKPKG 345 (425)
T ss_dssp ------HHHHHHHHHH-S---HHHHH-HHHHHHHSHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE---SB
T ss_pred ------HHHHHHhcCceeCccHHHHH-HHHHHhcChhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEecCCCC
Confidence 333332 23333334443 22233332 34689999999999999999999977 76 5666899999
Q ss_pred cEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEEC-CcccCC-----CCcEEEEeec-CHHHHHHHHHHH
Q 047983 150 SMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLP-GITVGL-----KDWLRITFAV-EPSAFEIGLGRM 222 (233)
Q Consensus 150 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~p-g~~f~~-----~~~~Rl~~~~-~~~~l~~~~~~l 222 (233)
|||++ ++... .....+..+.++.||.++| |+.|.. +..+||+.+. +.++++.+++.+
T Consensus 346 GYFIs-----------ld~~~-----G~AkrvV~lakeAGV~LT~AGAtfPyg~DP~D~nIRiAPS~P~leel~~Am~~~ 409 (425)
T PF12897_consen 346 GYFIS-----------LDVLD-----GTAKRVVELAKEAGVALTPAGATFPYGKDPRDSNIRIAPSYPSLEELETAMDVF 409 (425)
T ss_dssp SS-EE-----------EEEST-----T-HHHHHHHHHHTTEE---TTTTSGGG--TTS-EEEE--SSS-HHHHHHHHHHH
T ss_pred ceEEE-----------EecCC-----ChHHHHHHHHHHhCceeCCCCCCCCCCCCCCCCcEEecCCCCCHHHHHHHHHHH
Confidence 99999 54432 3789999999999999999 777752 5789999997 899999999988
Q ss_pred HHHHHH
Q 047983 223 KAFYYR 228 (233)
Q Consensus 223 ~~~l~~ 228 (233)
.-.++-
T Consensus 410 ~~cv~l 415 (425)
T PF12897_consen 410 ATCVKL 415 (425)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 765543
No 144
>PRK07505 hypothetical protein; Provisional
Probab=99.58 E-value=5.8e-14 Score=123.72 Aligned_cols=192 Identities=14% Similarity=0.126 Sum_probs=109.2
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCc-cccccccC--CccCEEEEccCccccCCCCceEEEEEecCCCccccccchh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTH-FVPMGVFG--SIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVA 77 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~-~~~~~~~~--~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~ 77 (233)
++|.++|++|+++||+||+|+...++... ......++ ..+++|+++|+||.|+.+| ||++++++ ++++ ..
T Consensus 199 ~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~G---g~~~~~~~-~~~~---~~ 271 (402)
T PRK07505 199 KELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGASG---GVIMLGDA-EQIE---LI 271 (402)
T ss_pred HHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhccC---eEEEeCCH-HHHH---HH
Confidence 37899999999999999999654443221 11112222 3578999999999999888 99876442 2332 11
Q ss_pred hhhhhhhHHhhhhhhhhccCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEe
Q 047983 78 FFHSISLNMRMDDYLLLSESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYC 156 (233)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~ 156 (233)
.......+++.++++.. ++..+.++...++++.+.++.++++.+.+...+... ....+.+..+
T Consensus 272 --------~~~~~~~t~~~~~~~~a~aa~~a~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~------~~g~~~~i~~-- 335 (402)
T PRK07505 272 --------LRYAGPLAFSQSLNVAALGAILASAEIHLSEELDQLQQKLQNNIALFDSLIPTE------QSGSFLPIRL-- 335 (402)
T ss_pred --------HHhCCCceeCCCCCHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHhc------CCCCCCCEEE--
Confidence 22222222333333332 222222221223344555666666666544332111 1122222233
Q ss_pred cCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC---CCcEEEEeec--CHHHHHHHHHHHHHHHHH
Q 047983 157 GSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL---KDWLRITFAV--EPSAFEIGLGRMKAFYYR 228 (233)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~---~~~~Rl~~~~--~~~~l~~~~~~l~~~l~~ 228 (233)
+.... . .....+.+.|.++||.+.|+..+.. .+++|+++.. ++++++++++.|.+++++
T Consensus 336 ---------~~~~~--~--~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~lRi~~~~~~t~eei~~~~~~l~~~l~~ 399 (402)
T PRK07505 336 ---------IYIGD--E--DTAIKAAKQLLDRGFYTSPVFFPVVAKGRAGLRIMFRASHTNDEIKRLCSLLKEILDE 399 (402)
T ss_pred ---------EEeCC--H--HHHHHHHHHHHHCCCeEeeecCCCCCCCCceEEEecCccCCHHHHHHHHHHHHHHHHh
Confidence 22111 0 1233444555578999999743322 3689999994 899999999999988754
No 145
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.57 E-value=4.1e-14 Score=125.88 Aligned_cols=195 Identities=18% Similarity=0.173 Sum_probs=110.3
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHS 81 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~ 81 (233)
+|.++|++||+++|+||+|.+|..+|.... ....+ ....+.|+||.++ +|+|+|++++++ ++++.+
T Consensus 232 ~l~~lc~~~g~llI~DEv~tG~gr~G~~~~-~~~~g---v~pDi~t~sK~lg-~G~pigav~~~~--~i~~~~------- 297 (433)
T PRK08117 232 KLREICDRHGILLIFDEVQTGFGRTGEWFA-AQTFG---VVPDIMTIAKGIA-SGLPLSAVVASK--ELMEQW------- 297 (433)
T ss_pred HHHHHHHHcCCEEEEecchhccCccccchh-HhhcC---CCCCEeehhhhcc-CCCcceeEEEcH--HHHhhc-------
Confidence 689999999999999999999876664321 11111 1223579999977 799999999987 344211
Q ss_pred hhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhc----CCCcccccCCCccEEEEEec
Q 047983 82 ISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKE----IPCITCPKKPEGSMFVMYCG 157 (233)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~~~~~~g~~~~~~~ 157 (233)
.......+++.++...+++++.+ +.-.. ....+.++++.+++.+.|++ .+.+. ..+.-|.+++
T Consensus 298 ----~~~~~~~T~~~np~~~aaa~a~L-~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~~~--~vrg~Gl~~g--- 364 (433)
T PRK08117 298 ----PLGSHGTTFGGNPVACAAALATL-EVIKE---EKLLDNANEMGAYALERLEVLKEKHPVIG--DVRGIGLMIG--- 364 (433)
T ss_pred ----cCCCCCCCCCcCHHHHHHHHHHH-HHHHh---ccHHHHHHHHHHHHHHHHHHHHhcCCcee--eeecCCcEEE---
Confidence 11111222333333332333333 21111 12233333334444444433 32221 1233355555
Q ss_pred CCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEe--ecCHHHHHHHHHHHHHHHHHHhh
Q 047983 158 SEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITF--AVEPSAFEIGLGRMKAFYYRHAK 231 (233)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~--~~~~~~l~~~~~~l~~~l~~~~~ 231 (233)
+.+..+...........+.+.+.++||.+.+... ..+++|++. ..+++++++++++|.+++++..+
T Consensus 365 ------i~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g~--~~~~lRl~p~~~~t~~~i~~~~~~l~~~l~~~~~ 432 (433)
T PRK08117 365 ------IEIVDPDGEPDGDAVEKILDKCLEKGLLFYLCGN--AGNVLRMIPPLTVTKEEIDEGLDILDEALTEYEA 432 (433)
T ss_pred ------EEEecCCCCcchHHHHHHHHHHHHCCCEEeecCC--CCCEEEEeCCccCCHHHHHHHHHHHHHHHHHHhc
Confidence 3332111000001345566677788999876321 247899995 45999999999999999987654
No 146
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.57 E-value=1.7e-13 Score=118.20 Aligned_cols=198 Identities=18% Similarity=0.147 Sum_probs=117.8
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCcccc-CCCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRW-IVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|+++|++|++++|+|++++.. . .+.++. ..+..+++.|++|.+ +.+| +||+++++ .+++.+.- ..
T Consensus 145 ~~i~~l~~~~~~~livD~~~s~g---~-~~~~~~---~~~~d~~~~s~~K~l~~~~G--~g~~~~~~--~~~~~~~~-~~ 212 (355)
T TIGR03301 145 EAIAKVARSHGAVLIVDAMSSFG---A-IPIDIE---ELDVDALIASANKCLEGVPG--FGFVIARR--DLLEASAG-NA 212 (355)
T ss_pred HHHHHHHHHcCCEEEEEeccccC---C-cccchh---hcCccEEEecCCcccccCCc--eeEEEECH--HHHHHhhC-CC
Confidence 47999999999999999877642 1 222222 224448899999975 5566 69999987 45432110 00
Q ss_pred hhh--hhHHhh---hhhhhhccCcchHH-HHHHHHhhhcHHH-HHHHHHHHHHHHHHHHHHHhhcCCCcccccCC--Ccc
Q 047983 80 HSI--SLNMRM---DDYLLLSESVYTTV-GAVPQILEKTEEE-FFSKITDILREAADICCDRLKEIPCITCPKKP--EGS 150 (233)
Q Consensus 80 ~~~--~~~~~~---~~~~~~~~~~~~~~-~~~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~--~~g 150 (233)
.+. +..... .........++... .++...++.-.++ .+.+.+++++++++++.+.|+++ ++....++ .++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~-g~~~~~~~~~~~~ 291 (355)
T TIGR03301 213 RSLYLDLYDQWAYMEKTGKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRAL-GFQPLLPERWQSP 291 (355)
T ss_pred CCceeeHHHHHHHhhhcCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHc-CCeeecCCCCCCC
Confidence 000 000000 00000111222222 3333333222222 36777888899999999999887 44322222 346
Q ss_pred EEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec--CHHHHHHHHHHHHHH
Q 047983 151 MFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV--EPSAFEIGLGRMKAF 225 (233)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~--~~~~l~~~~~~l~~~ 225 (233)
+++| ++++.. ... +.+.+.+.|.++||.+.||..+.. +++|+++.. ++++++.+++.|+++
T Consensus 292 ~~~~---------~~~~~~--~~~--~~~~~~~~l~~~gi~i~~~~~~~~-~~iRis~~~~~~~~~i~~~~~~l~~~ 354 (355)
T TIGR03301 292 IIVS---------FLYPDD--PDF--DFDDFYQELKERGFVIYPGKLTLA-DTFRIGTIGEIDAADIERLLEAIKDA 354 (355)
T ss_pred cEEE---------EECCCC--Ccc--hHHHHHHHHHHCCEEEECCccccc-cEEEEecCCCCCHHHHHHHHHHHHhh
Confidence 6777 444321 011 344566777788999999876554 799999854 889999999998765
No 147
>PRK10534 L-threonine aldolase; Provisional
Probab=99.57 E-value=4.1e-14 Score=121.44 Aligned_cols=176 Identities=11% Similarity=0.059 Sum_probs=104.7
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCc-cCEEEEccCccccCCCCceEE-EEEecCCCccccccchhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSI-VPVLTLGSISKRWIVPGWRLG-WLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~-~~~i~~~s~sK~~~~~G~R~G-~~~~~~~~~~~~~~~~~~~ 79 (233)
+|+++|++|+++|++||+|......... .+...+... ++++ .||||.|+++ +| |+++++ ++++. +
T Consensus 151 ~i~~~~~~~~~~lvvDEA~~~~~~~~~~-~~~~~~~~~~~~~~--~s~SK~~~~~---~G~~~~~~~--~~i~~---~-- 217 (333)
T PRK10534 151 QAWEFTRERNLALHVDGARIFNAVVAYG-CELKEITQYCDSFT--ICLSKGLGTP---VGSLLVGNR--DYIKR---A-- 217 (333)
T ss_pred HHHHHHHHcCCeEEeeHHHHHHHHHHcC-CCHHHHHhcCCEEE--EEeEcCCCCc---ccceEEcCH--HHHHH---H--
Confidence 5778999999999999998732111001 112222222 3333 3899988764 68 577766 44421 1
Q ss_pred hhhhhHHhhhhhhhhccCcchHH--HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEec
Q 047983 80 HSISLNMRMDDYLLLSESVYTTV--GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCG 157 (233)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~ 157 (233)
..++.....+.+..... .+.+.+ + +.. +..+...++++++.+.|+++ ++.. .+| +++|+|
T Consensus 218 ------~~~~~~~~~~~~~~~~~~a~~~~~l-~----~~~-~~~~~~~~~r~~l~~~L~~~-g~~~-~~~-~~nfv~--- 279 (333)
T PRK10534 218 ------RRWRKMTGGGMRQAGILAAAGLYAL-K----HNV-ARLQEDHDNAAWLAEQLREA-GADV-MRQ-DTNMLF--- 279 (333)
T ss_pred ------HHHHHHhCCchhhHHHHHHHHHHHH-H----hhH-HHHHHHHHHHHHHHHHHHhC-CCcc-CCC-CceEEE---
Confidence 22222111111111111 222222 1 112 23333455678999999987 5554 455 688999
Q ss_pred CCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEee--cCHHHHHHHHHHHHHHHH
Q 047983 158 SEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFA--VEPSAFEIGLGRMKAFYY 227 (233)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~--~~~~~l~~~~~~l~~~l~ 227 (233)
++++. ++.+.+.+.|+++||.|.||. ++|++.. .+++++++++++|++++.
T Consensus 280 ------~~~~~-------~~~~~~~~~l~~~gi~v~~~~------~~rl~~~~r~t~e~~~~~~~~l~~~~~ 332 (333)
T PRK10534 280 ------VRVGE-------EQAAALGEYMRERNVLINASP------IVRLVTHLDVSREQLAEVVAHWRAFLA 332 (333)
T ss_pred ------EECCc-------hhHHHHHHHHHHcCeeecCCc------eEEEEEEeCCCHHHHHHHHHHHHHHhc
Confidence 55541 134555788889999999974 5788665 489999999999998764
No 148
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.57 E-value=3.2e-14 Score=127.09 Aligned_cols=192 Identities=16% Similarity=0.123 Sum_probs=123.3
Q ss_pred ChHHHHHHHcCcEEEEccccC--ccccCCC-----ccccccccCCccCEEEEccCccccCCCCceE-----E-EEEecCC
Q 047983 1 FCIEETTKKLGIMVIADEVYG--HLVFGNT-----HFVPMGVFGSIVPVLTLGSISKRWIVPGWRL-----G-WLVTSDP 67 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~--~~~~~~~-----~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~-----G-~~~~~~~ 67 (233)
++|.++|++||++||+|+++. ...|... ...++..+ ++.+.|++|.+.++|+|+ | |+++++
T Consensus 201 ~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i-----~~~~~s~~D~~~~Sg~K~g~~~~GG~i~~~d- 274 (460)
T PRK13238 201 RAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEI-----AREMFSYADGLTMSAKKDAMVNIGGLLCFRD- 274 (460)
T ss_pred HHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHH-----hhhhcccCcEEEEecccCCCCcceeEEEcCh-
Confidence 378999999999999999663 3444321 12222211 345678888888888886 4 444443
Q ss_pred CccccccchhhhhhhhhHHhhhhh-------hhhccCcchHHHHHHHHhhhc-HHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 047983 68 NGILQDLGVAFFHSISLNMRMDDY-------LLLSESVYTTVGAVPQILEKT-EEEFFSKITDILREAADICCDRLKEIP 139 (233)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~ 139 (233)
++++ .+++.. .+.+.......+|++..+... .+++...+ .+++++|.+.|++.
T Consensus 275 ~~l~--------------~~~~~~~~~~~g~~t~~g~~~~~~~Ala~~l~e~~~~~~~~~~----~~~~~~l~~~L~~~- 335 (460)
T PRK13238 275 EDLF--------------TECRTLCILYEGFPTYGGLAGRDMEALAVGLYEGMDEDYLAYR----IGQVEYLGEGLEEA- 335 (460)
T ss_pred HHHH--------------HHhhhcccccCCcccccCcHHHHHHHHHhhHHHhhChHHHHHH----HHHHHHHHHHHHHC-
Confidence 2333 233222 122211111114555433221 22333333 33679999999886
Q ss_pred CcccccCCCccEEEEEecCCCcccccccccccC-CC----CChHHHHHHHHhccCEEEECCcccCC-------------C
Q 047983 140 CITCPKKPEGSMFVMYCGSEDKCLLKLNYSLLE-GI----NSDTEFALKLAKEESIIVLPGITVGL-------------K 201 (233)
Q Consensus 140 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~ll~~~gi~v~pg~~f~~-------------~ 201 (233)
++.+ ..|.||+|++ ++...+. .+ .++.+++.+++++.||.++|++.|.. .
T Consensus 336 G~~~-~~p~Gg~~v~-----------~d~~~~~~~~~~~~~~~~~~a~~L~~e~GV~~~~~~~f~~~~~~~~~~~~~~~~ 403 (460)
T PRK13238 336 GVPI-QTPAGGHAVF-----------VDAGKFLPHIPAEQFPAQALACELYLEAGIRGVEIGSLLLGRDPKTGEQLPAPA 403 (460)
T ss_pred CCCe-EccCCceEEE-----------EEchhcCCCCCCCCCchHHHHHHHHHHcCeeeecccceecccCCCCccccCCcc
Confidence 6765 6899999999 4443321 11 13688999999999999999998852 3
Q ss_pred CcEEEEeec---CHHHHHHHHHHHHHHHHHH
Q 047983 202 DWLRITFAV---EPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 202 ~~~Rl~~~~---~~~~l~~~~~~l~~~l~~~ 229 (233)
.++|+++.. +.+.++.+.++|.++.++.
T Consensus 404 ~~~Rla~~rr~~~~~~~~~~~~~l~~~~~~~ 434 (460)
T PRK13238 404 ELLRLAIPRRVYTQSHMDYVAEALKAVKENR 434 (460)
T ss_pred ceEEEecccccCCHHHHHHHHHHHHHHHHhH
Confidence 789999997 8999999999999877543
No 149
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.57 E-value=6.3e-14 Score=121.54 Aligned_cols=189 Identities=17% Similarity=0.140 Sum_probs=123.0
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCc--cccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTH--FVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAF 78 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~--~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~ 78 (233)
++|+++|++|++++++||+|+--++++.. ...-..+...+..|.++||||+||..| ||++++. .+.+ .++
T Consensus 191 ~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlGs~G---g~v~g~~--~~~d--~L~- 262 (388)
T COG0156 191 PELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALGSSG---GYIAGSA--ALID--YLR- 262 (388)
T ss_pred HHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhhcccC---ceeeCcH--HHHH--HHH-
Confidence 37999999999999999999988887543 222223445567899999999999999 9999987 4553 233
Q ss_pred hhhhhhHHhhhhhhhhccCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEec
Q 047983 79 FHSISLNMRMDDYLLLSESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCG 157 (233)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~ 157 (233)
++.+.++..+.-++..+ ++.+.+ ..-+.....++.++++...+.+.++.. ++. ..+.......
T Consensus 263 -------~~ar~~ifStalpP~~aaa~~~al---~~l~~~~~~r~~L~~~~~~~~~~~~~~-~~~--~~~s~s~I~p--- 326 (388)
T COG0156 263 -------NRARPFIFSTALPPAVAAAALAAL---RILEEGPERRERLQELAAFFRSLLKAL-GLV--LLPSESPIIP--- 326 (388)
T ss_pred -------HhCCceeccCCCCHHHHHHHHHHH---HHHHhCHHHHHHHHHHHHHHHHHHHhc-CCc--cCCCCCCeee---
Confidence 44455544444344433 333332 222345677888888888888666554 332 2233333333
Q ss_pred CCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC---CCcEEEEeec--CHHHHHHHHHHHHHH
Q 047983 158 SEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL---KDWLRITFAV--EPSAFEIGLGRMKAF 225 (233)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~---~~~~Rl~~~~--~~~~l~~~~~~l~~~ 225 (233)
+.+..+. ...+....++++ ||.+.+...-.. ...+|+|++. ++++++.+++.|.+.
T Consensus 327 ------v~~gd~~-----~a~~~s~~l~~~-Gi~v~~i~~PTVp~gtarlRi~lta~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 327 ------VILGDEE-----RALEASRALLEE-GIYVSAIRPPTVPKGTARLRITLTAAHTEEDIDRLAEALSEV 387 (388)
T ss_pred ------eEeCCHH-----HHHHHHHHHHHC-CeeEeeecCCCCCCCcceEEEEecCCCCHHHHHHHHHHHHhh
Confidence 2343221 144556666655 999987432221 4789999996 888888888877653
No 150
>PRK07179 hypothetical protein; Provisional
Probab=99.56 E-value=1.1e-13 Score=122.20 Aligned_cols=192 Identities=14% Similarity=0.119 Sum_probs=117.1
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccC-EEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVP-VLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~-~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|+++|++||+++|+||+|+...++......+..++..++ .+++.|+||.++ .|+||+++++ .+++ ..
T Consensus 201 ~~I~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~~g---~~~G~l~~~~--~~~~---~~-- 270 (407)
T PRK07179 201 ADIVDIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKAFA---GRAGIITCPR--ELAE---YV-- 270 (407)
T ss_pred HHHHHHHHHcCCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEeechHhhh---ccCeEEEeCH--HHHH---HH--
Confidence 47899999999999999999865443322111222332223 488999999975 3689999986 3332 11
Q ss_pred hhhhhHHhhhhhhhhccCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecC
Q 047983 80 HSISLNMRMDDYLLLSESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGS 158 (233)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~ 158 (233)
.........+.+.+++. +++.+.++. .+.....++.++++++++.+.|+++ ++.. . +. +.+++
T Consensus 271 ------~~~~~~~~~~~t~~~~~~aa~~aal~~--~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v-~-~~-~~i~~---- 334 (407)
T PRK07179 271 ------PFVSYPAIFSSTLLPHEIAGLEATLEV--IESADDRRARLHANARFLREGLSEL-GYNI-R-SE-SQIIA---- 334 (407)
T ss_pred ------HHhCcCeeeCCCCCHHHHHHHHHHHHH--HhcCHHHHHHHHHHHHHHHHHHHHc-CCCC-C-CC-CCEEE----
Confidence 11111111222222222 333333321 2233567889999999999999887 5543 2 33 45556
Q ss_pred CCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccC---CCCcEEEEeec--CHHHHHHHHHHHHHHHHHH
Q 047983 159 EDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVG---LKDWLRITFAV--EPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~---~~~~~Rl~~~~--~~~~l~~~~~~l~~~l~~~ 229 (233)
+.++.. .+.+.+.+.|.++||.+..-..-. ..+++|+++.. ++++++++++.|.+++++.
T Consensus 335 -----l~~~~~------~~~~~~~~~L~~~GI~~~~~~~p~~~~~~~~lRis~~~~~t~edi~~~~~~l~~~~~~~ 399 (407)
T PRK07179 335 -----LETGSE------RNTEVLRDALEERNVFGAVFCAPATPKNRNLIRLSLNADLTASDLDRVLEVCREARDEV 399 (407)
T ss_pred -----EEeCCH------HHHHHHHHHHHHCCceEeeecCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhh
Confidence 333311 144666677888899843210000 14789999995 8999999999999988765
No 151
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.55 E-value=2.3e-13 Score=120.04 Aligned_cols=190 Identities=17% Similarity=0.137 Sum_probs=115.6
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCC-ccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGS-IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|.++|++||+++|+||+|+...++..........+. .+..|.++||||.|+.+| ||+++++ +++
T Consensus 197 ~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~i~~~tlsKa~g~~G---G~~~~~~--~~~-------- 263 (406)
T PRK13393 197 AEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLADRLTIIEGTLAKAFGVMG---GYITGSA--ALC-------- 263 (406)
T ss_pred HHHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCCCCCeEEEEeCchhhcccC---ceeeCCH--HHH--------
Confidence 37899999999999999999844444322111111111 124678899999999999 9999876 333
Q ss_pred hhhhhHHhhhhhh---hhccCcchHH--HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEE
Q 047983 80 HSISLNMRMDDYL---LLSESVYTTV--GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVM 154 (233)
Q Consensus 80 ~~~~~~~~~~~~~---~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~ 154 (233)
..+.... .++.+.++.. ++.+.+ +. ..+. ...+..++++++++.+.|+++ ++.. .++.+.++.+
T Consensus 264 ------~~l~~~~~~~~~t~~~~p~~~aa~~aaL-~~-~~~~-~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~~~~i~~v 332 (406)
T PRK13393 264 ------DFIRSFASGFIFTTSLPPAVAAGALASV-RH-LKAS-SAERERHQDRVARLRARLDKA-GIPH-LPNPSHIVPV 332 (406)
T ss_pred ------HHHHHhCcCceecCccCHHHHHHHHHHH-HH-HhhC-HHHHHHHHHHHHHHHHHHHHc-CCCc-CCCCCCeEEE
Confidence 2222211 1222223322 333333 21 1222 223466788899999999876 4443 4555554433
Q ss_pred EecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccC---CCCcEEEEeec--CHHHHHHHHHHHHHHHHHH
Q 047983 155 YCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVG---LKDWLRITFAV--EPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~---~~~~~Rl~~~~--~~~~l~~~~~~l~~~l~~~ 229 (233)
.++.+. +..++..++++++||.+.++.... ..+++|+++.. ++++++++++.|.+++++.
T Consensus 333 ----------~~~~~~-----~~~~l~~~L~~~~Gi~v~~~~~p~~p~g~~~iRis~~~~~t~edid~l~~~l~~~~~~~ 397 (406)
T PRK13393 333 ----------MVGDPV-----LCKQISDELLDRYGIYVQPINYPTVPRGTERLRITPSPLHTDADIEHLVQALSEIWARL 397 (406)
T ss_pred ----------EeCCHH-----HHHHHHHHHHHhCCEEEEeECCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhc
Confidence 222110 134445555555799999864332 13789999884 8999999999999988764
No 152
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.55 E-value=3.8e-13 Score=118.39 Aligned_cols=201 Identities=14% Similarity=0.088 Sum_probs=119.1
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|.++|+++|+++|+|++|....+. ..+..+ +..++..|++|.||.+| +||+++++ ++++.+.-....
T Consensus 180 ~~i~~l~~~~g~~~ivD~a~~~g~~~----~~~~~~---~~d~~~~s~~K~~gp~G--~G~l~~~~--~~~~~~~~~~~~ 248 (401)
T PRK10874 180 ARAITLAHQAGMVVMVDGAQGAVHFP----ADVQAL---DIDFYAFSGHKLYGPTG--IGVLYGKS--ELLEAMSPWQGG 248 (401)
T ss_pred HHHHHHHHHcCCEEEEECCccccccc----CCchhc---CCCEEEEecccccCCCc--cEEEEEch--HHHhcCCCeecC
Confidence 47899999999999999999753221 122222 23477899999888777 59999887 444322110000
Q ss_pred hhh--hH--Hhh--h-hhhhhccCcch-HH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccE
Q 047983 81 SIS--LN--MRM--D-DYLLLSESVYT-TV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSM 151 (233)
Q Consensus 81 ~~~--~~--~~~--~-~~~~~~~~~~~-~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~ 151 (233)
... .. ..+ . ....+..++++ .. .++.+.++...+.-..+.+++.++.++++.+.|++++++..+..+. +.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~-~~ 327 (401)
T PRK10874 249 GKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQAESWSRSLATLAEDALAKLPGFRSFRCQD-SS 327 (401)
T ss_pred CcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCC-Cc
Confidence 000 00 000 0 00011111222 11 3333322211122234467888888899999998887765433344 44
Q ss_pred EEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccC--------CCCcEEEEeec--CHHHHHHHHHH
Q 047983 152 FVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVG--------LKDWLRITFAV--EPSAFEIGLGR 221 (233)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~--------~~~~~Rl~~~~--~~~~l~~~~~~ 221 (233)
.++ +.++ +. +.+.+...|.++||.+.+|..+. ..+++|+|+.. ++++++..++.
T Consensus 328 i~~---------~~~~-----~~--~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRiS~~~~nt~edid~ll~a 391 (401)
T PRK10874 328 LLA---------FDFA-----GV--HHSDLVTLLAEYGIALRAGQHCAQPLLAALGVTGTLRASFAPYNTQSDVDALVNA 391 (401)
T ss_pred EEE---------EEEC-----Cc--CHHHHHHHHHHCCcEEeccccchHHHHHHhCCCCEEEEEecccCCHHHHHHHHHH
Confidence 444 2232 22 23455567788999999988653 35899999995 78999999999
Q ss_pred HHHHHHHH
Q 047983 222 MKAFYYRH 229 (233)
Q Consensus 222 l~~~l~~~ 229 (233)
|+++++..
T Consensus 392 l~~~~~~~ 399 (401)
T PRK10874 392 VDRALELL 399 (401)
T ss_pred HHHHHHHh
Confidence 99887653
No 153
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.54 E-value=2.2e-13 Score=120.23 Aligned_cols=189 Identities=13% Similarity=0.100 Sum_probs=112.0
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHS 81 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~ 81 (233)
+|.++|++||+++|+||+|..+..+|.. .+....+..+.+.|+||.++ +|+|+||+++++ ++.+ ..
T Consensus 212 ~l~~l~~~~g~llI~DEv~tg~gr~G~~----~a~~~~~~~pdi~t~~K~l~-~G~piga~~~~~--~~~~---~~---- 277 (408)
T PRK04612 212 RVRALCDQHDALLVLDEIQCGMGRTGTL----FAHWQEQVTPDIVTLAKALG-GGFPIGAMLAGP--KVAE---TM---- 277 (408)
T ss_pred HHHHHHHHcCCEEEEeccccCCCcCCch----hhhhhcCCCCCEEEEcchhc-CCCceEEEEECH--HHHh---hh----
Confidence 6899999999999999999998766531 11222345577889999976 799999999886 3432 11
Q ss_pred hhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhc----CCCcccccCCCccEEEEEec
Q 047983 82 ISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKE----IPCITCPKKPEGSMFVMYCG 157 (233)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~~~~~~g~~~~~~~ 157 (233)
.......+++.++... ++..+.++.-.+ .+..+.++++-+++.+.|++ .+.+.. ....|.++..
T Consensus 278 ----~~~~~~~t~~~~p~~~-aaa~a~L~~~~~---~~l~~~~~~~g~~l~~~l~~l~~~~~~i~~-vrg~Gl~~~i--- 345 (408)
T PRK04612 278 ----QFGAHGTTFGGNPLAA-AVARVALRKLAS---PQIAANVARQSAALRAGLEALNAEFGVFAQ-VRGRGLMLGA--- 345 (408)
T ss_pred ----cCCCcCCCCCCCHHHH-HHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhhCCCeee-eeccceEEEE---
Confidence 1112222333333333 333333322111 23344444444444444443 322221 3444433332
Q ss_pred CCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEee--cCHHHHHHHHHHHHHHHHHHhh
Q 047983 158 SEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFA--VEPSAFEIGLGRMKAFYYRHAK 231 (233)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~--~~~~~l~~~~~~l~~~l~~~~~ 231 (233)
.+... ..+....+.+.+.++||.+.|.. .+.+|+... .++++++++++++.+.+.+..+
T Consensus 346 -------~~~~~----~~~~a~~i~~~l~~~Gvlv~~~g----~~~lRl~Ppl~it~eeid~~l~~l~~~l~~~~~ 406 (408)
T PRK04612 346 -------VLAPA----HAGQAGAILDLAAEHGLLLLQAG----PDVLRFVPALNLTDAELADGLARLRLALADYVA 406 (408)
T ss_pred -------EecCc----hhhHHHHHHHHHHHCCeEEeeCC----CCEEEEcCCccCCHHHHHHHHHHHHHHHHHHhh
Confidence 22100 00134455666778999998732 378999755 4899999999999999987654
No 154
>PLN02624 ornithine-delta-aminotransferase
Probab=99.54 E-value=1.7e-13 Score=123.12 Aligned_cols=193 Identities=12% Similarity=0.073 Sum_probs=107.8
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|.++|++||+++|.||+|..+..+|... .....+.... +.++||.++.+++++|++++++ ++++. .
T Consensus 248 ~~l~~lc~~~gillI~DEv~tG~GrtG~~~-a~~~~~i~pD---iv~lsK~lggG~~pigav~~~~--~i~~~---~--- 315 (474)
T PLN02624 248 KAVRELCSKHNVLMIADEIQTGLARTGKML-ACDWEEVRPD---VVILGKALGGGVIPVSAVLADK--DVMLC---I--- 315 (474)
T ss_pred HHHHHHHHHcCCEEEEeccccCcCcCcchh-hHHhcCCCCC---EEEecccccCCCCcceeeeecH--HHHhH---h---
Confidence 378999999999999999999876665321 1111111122 3347999998889999999976 34321 1
Q ss_pred hhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHH----HHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEe
Q 047983 81 SISLNMRMDDYLLLSESVYTTVGAVPQILEKTEE----EFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYC 156 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~ 156 (233)
.......+++.++..++++.+.+ +...+ ++..++.+.++++.+.+.+. ++.......+.|.++..
T Consensus 316 -----~~~~~~~T~~g~pl~~aaa~aaL-e~l~~~~l~~~~~~~~~~l~~~L~~l~~~---~~~~i~~vrg~G~~~~i-- 384 (474)
T PLN02624 316 -----KPGEHGSTFGGNPLASAVAMAAL-QVVQDEKLAERSAKLGQELRDQLQKIQKQ---FPKLIKEVRGRGLLNAV-- 384 (474)
T ss_pred -----ccCCcCCCCCCCHHHHHHHHHHH-HHHHhchHHHHHHHHHHHHHHHHHHHHHh---CCCceEEEEeeEEEEEE--
Confidence 11112222333333333444443 21111 22333333333333333222 23211113455555553
Q ss_pred cCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEe--ecCHHHHHHHHHHHHHHHHHHh
Q 047983 157 GSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITF--AVEPSAFEIGLGRMKAFYYRHA 230 (233)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~--~~~~~~l~~~~~~l~~~l~~~~ 230 (233)
.++.+.. +. .....+.+.|.++||.+.|+. .+++|++. ..+++++++++++|.+++....
T Consensus 385 --------~l~~~~~-~~-~~a~~~~~~L~e~GV~v~p~~----~~~lR~~p~l~~t~e~id~~l~~L~~~l~~~~ 446 (474)
T PLN02624 385 --------VLNSPKL-GP-VSAYDVCLKLKERGLLAKPTH----DTIIRLAPPLSISEDELQECSKALSDVLEHDL 446 (474)
T ss_pred --------EecCCCc-Ch-HHHHHHHHHHHhCCeEEecCC----CCEEEEECCccCCHHHHHHHHHHHHHHHHHHH
Confidence 2322110 00 123334445678899999863 47899986 4589999999999999987764
No 155
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.53 E-value=1.6e-13 Score=120.74 Aligned_cols=188 Identities=14% Similarity=0.145 Sum_probs=111.2
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|.++|++||+++|.||+|..+..+|... .....+-. .-+.++||.++ .|+|+||+++++ ++++. .
T Consensus 203 ~~l~~lc~~~g~llI~DEv~tG~Gr~G~~~-a~~~~gv~---pDi~t~~K~lg-gG~pigav~~~~--~i~~~---~--- 269 (397)
T TIGR03246 203 KGLRELCDRHNALLIFDEVQTGVGRTGELY-AYMHYGVT---PDILTSAKALG-GGFPIGAMLTTT--EIAAH---L--- 269 (397)
T ss_pred HHHHHHHHHcCCEEEEechhhcCCccccch-hhhhcCCC---CCEEEeehhhh-CCcceeEEEEcH--HHHHh---c---
Confidence 478999999999999999999886665422 11111211 22348999976 699999999987 34421 1
Q ss_pred hhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCC---CcccccCCCccEEEEEec
Q 047983 81 SISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIP---CITCPKKPEGSMFVMYCG 157 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~---~~~~~~~~~~g~~~~~~~ 157 (233)
.......+++.++...+++++.+ +. .+ ..++.+.++++.+++.+.|+++. .+.....+.|.++..
T Consensus 270 -----~~~~~~~t~~~~p~~~aaa~a~l-~~-~~--~~~l~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~G~~~~i--- 337 (397)
T TIGR03246 270 -----KVGTHGTTYGGNPLACAVAGKVL-DL-VN--TPELLAGVKQRHDLFVDGLEKINARYNVFSEIRGKGLLIGA--- 337 (397)
T ss_pred -----cCCCcCCCCCCCHHHHHHHHHHH-HH-Hh--hccHHHHHHHHHHHHHHHHHHHHhcCCCeEeeecCceEEEE---
Confidence 11112223333333332444443 21 11 13467778888888888887642 111112344444332
Q ss_pred CCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEE--eecCHHHHHHHHHHHHHHHHH
Q 047983 158 SEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRIT--FAVEPSAFEIGLGRMKAFYYR 228 (233)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~--~~~~~~~l~~~~~~l~~~l~~ 228 (233)
.+... . . .....+...|.++||.+.+.. .+++|++ +..+++++++++++|.+++.+
T Consensus 338 -------~~~~~-~-~--~~~~~~~~~l~~~Gv~~~~~g----~~~lR~~p~~~~t~~~i~~~~~~l~~~l~~ 395 (397)
T TIGR03246 338 -------VLTEA-Y-Q--GKAKQFVNAAAEEGVIALIAG----PNVVRFAPSLVISDDDIDEGLARFERAIEQ 395 (397)
T ss_pred -------EEcCc-h-h--hHHHHHHHHHHHCCeEEeecC----CCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 22110 0 0 123334445567799988632 3789995 445999999999999998865
No 156
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.53 E-value=2.5e-13 Score=121.18 Aligned_cols=194 Identities=19% Similarity=0.155 Sum_probs=112.1
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|.++|++||+++|.||++..|..+|..+ .....+-.+.++ +++|.++ .|+++|++++++ ++++. .
T Consensus 243 ~~lr~lc~~~gillI~DEV~tGfgRtG~~f-a~~~~gv~PDiv---~~gK~l~-~G~Pi~av~~~~--~i~~~---~--- 309 (443)
T PRK06058 243 PALLEWCRENGVVFIADEVQTGFARTGAWF-ACEHEGIVPDLI---TTAKGIA-GGLPLSAVTGRA--EIMDA---P--- 309 (443)
T ss_pred HHHHHHHHHcCCEEEEeccccCCCcChhhh-HHHhcCCCCCEE---EEccccc-CCCccEEEEEcH--HHHhh---c---
Confidence 368999999999999999999987666422 111122222233 5589977 799999999987 44421 1
Q ss_pred hhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhc----CCCcccccCCCccEEEEEe
Q 047983 81 SISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKE----IPCITCPKKPEGSMFVMYC 156 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~~~~~~g~~~~~~ 156 (233)
.......+++.++...+++++.+ +.-.+ .+..+.++++.+++.+.|++ .+.+.. ..+.|.++.+.+
T Consensus 310 -----~~~~~~~T~~gnpl~~aaa~a~L-~~~~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~-vrg~G~~~~i~~ 379 (443)
T PRK06058 310 -----HPGGLGGTYGGNPVACAAALAAI-ETIEE---DDLVARARQIEALMTDRLRALAAEDDRIGD-VRGRGAMIAIEL 379 (443)
T ss_pred -----cCCCCCCCCCCCHHHHHHHHHHH-HHHHH---cCHHHHHHHHHHHHHHHHHHHHhhCCcEEe-eeccceEEEEEE
Confidence 11112233433333333444443 21111 13344444445555555544 232222 467777776522
Q ss_pred cCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEE--eecCHHHHHHHHHHHHHHHHH
Q 047983 157 GSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRIT--FAVEPSAFEIGLGRMKAFYYR 228 (233)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~--~~~~~~~l~~~~~~l~~~l~~ 228 (233)
-++ + ... ....-...+.+.+.++||.+.|+..|+ +++|+. +..+++++++++++|.+++++
T Consensus 380 ~~~-~-------~~~-~~~~~~~~l~~~~~~~Gv~~~~~~~~~--~~lr~~Ppl~~t~~~i~~~~~~l~~~l~~ 442 (443)
T PRK06058 380 VKP-G-------TTE-PDAELTKALAAAAHAAGVIVLTCGTYG--NVIRLLPPLVIGDELLREGLDVLEAALAD 442 (443)
T ss_pred ecC-C-------CCC-CcHHHHHHHHHHHHHCCeEEeccCCCC--CEEEEECCCccCHHHHHHHHHHHHHHHHh
Confidence 111 0 000 000012334444567899999976665 689995 556999999999999999865
No 157
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.53 E-value=5.7e-13 Score=118.75 Aligned_cols=197 Identities=17% Similarity=0.162 Sum_probs=106.7
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|.++|++||+++|+||+|.+|.++|... .....+..+.++ ++||.++ +|+|+||+++++ ++++. +
T Consensus 228 ~~l~~l~~~~g~llI~DEv~~g~gr~G~~~-a~~~~~~~pDii---tlsK~l~-~G~pigav~~~~--~i~~~---~--- 294 (443)
T PRK08360 228 KKLKKILDEHGILLVVDEVQSGLGRTGKWF-AIEHFGVEPDII---TLGKPLG-GGLPISATIGRA--EIMDS---L--- 294 (443)
T ss_pred HHHHHHHHHcCCEEEEeccccCCCcCccch-hhhhcCCCCCEE---Eeccccc-CCceeEEEEEcH--HHHhh---h---
Confidence 368999999999999999999987766422 211222223343 7799987 899999999987 44421 1
Q ss_pred hhhhHHhhhhhhhhccCcchHHHHHHHHhhhc-HHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCC
Q 047983 81 SISLNMRMDDYLLLSESVYTTVGAVPQILEKT-EEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSE 159 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~ 159 (233)
.......+++.++..+.++++.+ +.- .++..++.++.-...++.+.+...+.+.+. ...+.|.++ -
T Consensus 295 -----~~~~~~~T~~~~p~~~aaa~a~l-~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~-~vrg~Gl~~-g----- 361 (443)
T PRK08360 295 -----PPLAHAFTLSGNPVASAAALAVI-EEIEEKNLLKRAEKLGNYTKKRLEEMKKKHELIG-DVRGIGLMI-G----- 361 (443)
T ss_pred -----cCCCCCCCCCcCHHHHHHHHHHH-HHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCee-eeeccceEE-E-----
Confidence 11112223333333332333333 211 112222322222222233322222233222 234444443 3
Q ss_pred Ccccccccccc--cCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEE--EeecCHHHHHHHHHHHHHHHHHHhh
Q 047983 160 DKCLLKLNYSL--LEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRI--TFAVEPSAFEIGLGRMKAFYYRHAK 231 (233)
Q Consensus 160 ~~~~~~~~~~~--~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl--~~~~~~~~l~~~~~~l~~~l~~~~~ 231 (233)
+.+.... ..........+...+.++||.+.+.. .+.+|+ ++..++++++++++++.+.+++..+
T Consensus 362 ----ie~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~----~~~lr~~P~l~~t~~~id~~~~~l~~~l~~~~~ 429 (443)
T PRK08360 362 ----VDLVKDRETKERAYEEAAKVVWRAWELGLIVTFFS----GNVLRIQPPLTIEKEVLDEGLDILEEAIEDVEE 429 (443)
T ss_pred ----EEEecCCcccCccHHHHHHHHHHHHHCCeEEeecC----CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 2221110 00000123345556678899987532 367899 4445999999999999999987643
No 158
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.52 E-value=9.2e-13 Score=115.86 Aligned_cols=201 Identities=15% Similarity=0.075 Sum_probs=117.4
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|.++|+++|+++|+|++|+...+ +..+..++ .-++..|.+|.++.+| +||+++++ .+++++.-....
T Consensus 177 ~~i~~~~~~~~~~~ivD~a~~~~~~----~~~~~~~~---~d~~~~s~~K~~gp~G--~G~l~~~~--~~~~~~~~~~~~ 245 (398)
T TIGR03392 177 ARAITLAHQYGAVVVVDGAQGVVHG----PPDVQALD---IDFYAFSGHKLYGPTG--IGVLYGKT--ELLEAMPPWQGG 245 (398)
T ss_pred HHHHHHHHHcCCEEEEEhhhhcCCC----CCChhhcC---CCEEEEecccccCCCc--eEEEEEcH--HHHhhCCCeecC
Confidence 3689999999999999999975322 12222222 2377888889888776 89999887 444321100000
Q ss_pred -hh----hhHH-hhhh-hhhhccCcchH-H-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccE
Q 047983 81 -SI----SLNM-RMDD-YLLLSESVYTT-V-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSM 151 (233)
Q Consensus 81 -~~----~~~~-~~~~-~~~~~~~~~~~-~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~ 151 (233)
+. +... .... ...+..+++.. . .++...++-..+.-..+.+++..+.++++.+.|++++++..+..+. +.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i~~~~~~l~~~l~~~l~~l~g~~~~~~~~-~~ 324 (398)
T TIGR03392 246 GKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAEAWSVSLADLAEERLAQLPGFRSFRCPG-SS 324 (398)
T ss_pred CceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCC-Cc
Confidence 00 0000 0000 00111122222 1 2333222211122234567778888888888888877665432343 44
Q ss_pred EEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccC--------CCCcEEEEeec--CHHHHHHHHHH
Q 047983 152 FVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVG--------LKDWLRITFAV--EPSAFEIGLGR 221 (233)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~--------~~~~~Rl~~~~--~~~~l~~~~~~ 221 (233)
.++ +.++ ++ +. +.+...|+++||.+.+|..+. ..+++|+|+.. ++++++..++.
T Consensus 325 i~~---------~~~~-----~~-~~-~~l~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRvS~~~~~t~~ei~~l~~~ 388 (398)
T TIGR03392 325 LLA---------FDFA-----GV-HH-SDLAALLAESGIALRAGQHCAQPLMAALGVSGTLRASFAPYNTQQDVDALVDA 388 (398)
T ss_pred EEE---------EEeC-----Cc-CH-HHHHHHHHhCCEEEecCccchHHHHHHhCCCCEEEEEeeccCCHHHHHHHHHH
Confidence 454 2332 22 23 345555778899999988553 35799999985 88999999999
Q ss_pred HHHHHHHH
Q 047983 222 MKAFYYRH 229 (233)
Q Consensus 222 l~~~l~~~ 229 (233)
|+++++..
T Consensus 389 l~~~~~~~ 396 (398)
T TIGR03392 389 VGAALELL 396 (398)
T ss_pred HHHHHHHh
Confidence 99887654
No 159
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.52 E-value=4.2e-13 Score=119.04 Aligned_cols=197 Identities=14% Similarity=0.081 Sum_probs=116.4
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|.++|++||+++|+||+|..|..+|.. .+....+.+..+.++||.++ +|+|+||+++++ ++++. .
T Consensus 222 ~~l~~l~~~~g~llI~DEv~tG~gr~G~~----~a~~~~gv~pDi~tlsK~l~-~G~pigav~~~~--~i~~~---~--- 288 (425)
T PRK07495 222 KALRELCDQHGILLIADEVQTGFARTGKL----FAMEHHEVAADLTTMAKGLA-GGFPLAAVTGRA--EIMDA---P--- 288 (425)
T ss_pred HHHHHHHHHcCCEEEEechhhcCCcCCCc----eeecccCCCCCEEeehhhhc-CCccceEEEEcH--HHHhc---c---
Confidence 36899999999999999999998666532 22333344556889999965 799999999987 44431 1
Q ss_pred hhhhHHhhhhhhhhccCcchHHHHHH--HHhhhc-HHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEec
Q 047983 81 SISLNMRMDDYLLLSESVYTTVGAVP--QILEKT-EEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCG 157 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~ 157 (233)
.......+++.++...+++.+ .+++.+ ..++.+++.+.++++.+.+.+. ++.+.. .... |+++|
T Consensus 289 -----~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~---~~~i~~-vrG~-Gl~~~--- 355 (425)
T PRK07495 289 -----GPGGLGGTYGGNPLGIAAAHAVLDVIEEEDLCERANQLGNRLKQRLASLRET---VPEIAD-IRGP-GFMNA--- 355 (425)
T ss_pred -----CCCCcCCCCCCCHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHhh---CCCeee-eecC-ceEEE---
Confidence 111122233333444332222 223222 2344455555555555444333 333221 2222 88899
Q ss_pred CCCccccccccccc-CCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEee--cCHHHHHHHHHHHHHHHHHHhh
Q 047983 158 SEDKCLLKLNYSLL-EGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFA--VEPSAFEIGLGRMKAFYYRHAK 231 (233)
Q Consensus 158 ~~~~~~~~~~~~~~-~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~--~~~~~l~~~~~~l~~~l~~~~~ 231 (233)
+.+..... .+.......+.+.+.++||.+.+.... .+.+|+... .+++++++++++|.+.+++.+.
T Consensus 356 ------iel~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~g~~--~~~~r~~Ppl~it~~~id~~~~~l~~~l~~~~~ 424 (425)
T PRK07495 356 ------VEFNDADSGLPSAEFANRVRLKALEKGLILLTCGVH--GNVIRFLAPITIQDDVFAEALDILEASILEASA 424 (425)
T ss_pred ------EEEecCCCCCccHHHHHHHHHHHHHCCeEEeecCCC--CCEEEEeCCCccCHHHHHHHHHHHHHHHHHHhc
Confidence 54422110 000011344556667889999764222 367888655 4899999999999999987653
No 160
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.51 E-value=9.2e-13 Score=114.00 Aligned_cols=201 Identities=17% Similarity=0.095 Sum_probs=114.8
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccch--hh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGV--AF 78 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~--~~ 78 (233)
++|.++|+++|+++|+|++|.. |..+.++...+. -+++.|.+|.++.|. ++||++.++ ++++.+.. ..
T Consensus 144 ~~i~~~a~~~~~~li~D~~~~~----g~~~~~~~~~~~---d~~~~s~~K~l~~p~-g~G~l~~~~--~~~~~~~~~~~~ 213 (356)
T cd06451 144 EGIGALAKKHDALLIVDAVSSL----GGEPFRMDEWGV---DVAYTGSQKALGAPP-GLGPIAFSE--RALERIKKKTKP 213 (356)
T ss_pred HHHHHHHHhcCCEEEEeeehhc----cCccccccccCc---cEEEecCchhccCCC-CcceeEECH--HHHHHHHhcCCC
Confidence 4689999999999999998863 212222222222 255778899977653 589999987 34432110 00
Q ss_pred hhhhhhHHhhhhhh----hhccCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCC--ccE
Q 047983 79 FHSISLNMRMDDYL----LLSESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPE--GSM 151 (233)
Q Consensus 79 ~~~~~~~~~~~~~~----~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~--~g~ 151 (233)
.....-......+. ....+++... .++.+.++.-....+++..+..+++++++.+.|+++ ++....++. ++.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~ 292 (356)
T cd06451 214 KGFYFDLLLLLKYWGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEAL-GLKLLAKPELRSPT 292 (356)
T ss_pred CceeecHHHHHhhhcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCeeccCcccCCCc
Confidence 00000000000110 1111122221 233333222223345677788889999999999876 444322222 455
Q ss_pred EEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec--CHHHHHHHHHHHHHHH
Q 047983 152 FVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV--EPSAFEIGLGRMKAFY 226 (233)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~--~~~~l~~~~~~l~~~l 226 (233)
++| +.++. +. +..+++..+.++.||.+.||..+...+++|+++.. ++++++.+++.|.+++
T Consensus 293 ~~~---------~~~~~----~~-~~~~~~~~L~~~~gI~~~~g~~~~~~~~iRis~~~~~~~e~v~~~~~~l~~~~ 355 (356)
T cd06451 293 VTA---------VLVPE----GV-DGDEVVRRLMKRYNIEIAGGLGPTAGKVFRIGHMGEATREDVLGVLSALEEAL 355 (356)
T ss_pred eEE---------EECCC----CC-CHHHHHHHHHHhCCEEEecccccccCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 566 43432 11 24455544443449999998765445799999984 7899999999998865
No 161
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.51 E-value=3.1e-13 Score=119.04 Aligned_cols=188 Identities=17% Similarity=0.177 Sum_probs=112.0
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|.++|++||+++|+||+|..+.++|... .....+..+.++ ++||.++..++|+||+++++ ++++. +
T Consensus 210 ~~l~~l~~~~~~lli~DEv~~g~g~~G~~~-~~~~~~~~~di~---~~gK~l~~g~~~ig~v~~~~--~i~~~--~---- 277 (401)
T TIGR01885 210 KKVRELCTKHNVLLIADEIQTGLGRTGKLL-CVDHENVKPDIV---LLGKALSGGVYPVSAVLADD--DVMLT--I---- 277 (401)
T ss_pred HHHHHHHHHcCCEEEEechhhCCCccchhh-HHhhcCCCCCEE---EeeccccCCCCCcEEEEEcH--HHHhh--c----
Confidence 378999999999999999999876666321 221112222333 57899888779999999987 44431 1
Q ss_pred hhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCC-CcccccCCCccEEEEEecCC
Q 047983 81 SISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIP-CITCPKKPEGSMFVMYCGSE 159 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~~~g~~~~~~~~~ 159 (233)
.......+++.++..+..+.+.+ +.-.++ ...+..++..+++.+.|++++ .+.....+.|.++..
T Consensus 278 -----~~~~~~~t~~~~p~~~~aa~a~L-~~i~~~---~l~~~~~~~~~~~~~~L~~l~~~~~~~~~g~g~~~~i----- 343 (401)
T TIGR01885 278 -----KPGEHGSTYGGNPLACAVAVAAL-EVLEEE---KLAENAEKLGEIFRDQLKKLPKPIITEVRGRGLLNAI----- 343 (401)
T ss_pred -----cCCCCCCCCCCCHHHHHHHHHHH-HHHHhc---cHHHHHHHHHHHHHHHHHhccCCceeEEeecCeeEEE-----
Confidence 11011122333333332343333 211111 244566666788888888763 221112455666653
Q ss_pred CcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEee--cCHHHHHHHHHHHHHHH
Q 047983 160 DKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFA--VEPSAFEIGLGRMKAFY 226 (233)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~--~~~~~l~~~~~~l~~~l 226 (233)
.++.+.. + .+...+...|.++||.+.|+. .+.+|++.. .+++++++++++|.+++
T Consensus 344 -----~~~~~~~-~--~~~~~l~~~l~~~Gv~v~~~~----~~~lRi~p~l~~t~~~i~~~l~~l~~~l 400 (401)
T TIGR01885 344 -----VIDESKT-G--RTAWDLCLKLKEKGLLAKPTH----GNIIRLAPPLVITEEQLDEGLEIIKKVI 400 (401)
T ss_pred -----EeccCcc-h--hHHHHHHHHHHhCCEEEEecC----CCEEEEeCCccCCHHHHHHHHHHHHHHh
Confidence 2332110 0 133444445568899998853 478999875 48999999999998875
No 162
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.50 E-value=2.6e-13 Score=120.37 Aligned_cols=186 Identities=13% Similarity=0.096 Sum_probs=115.1
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCC--ccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNT--HFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAF 78 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~--~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~ 78 (233)
++|.++|++||++||+||+|+.++++.. .......+. .++.|+++||||.+|..| |++++++ ++++ .++
T Consensus 269 ~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~-~di~ii~~TLsKA~G~~G---Gfi~gs~--~~~~---~l~ 339 (476)
T PLN02955 269 EELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCE-ADVDLCVGTLSKAAGCHG---GFIACSK--KWKQ---LIQ 339 (476)
T ss_pred HHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhCCC-CCCcEEEEeCccchhccC---ceeecHH--HHHH---HHH
Confidence 4789999999999999999998888753 222222222 367799999999998888 9999987 4442 220
Q ss_pred hhhhhhHHhhhhhhhhccCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEec
Q 047983 79 FHSISLNMRMDDYLLLSESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCG 157 (233)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~ 157 (233)
+..+.+...+..++..+ ++++++. .... -...++.+++|.+++.+.+ ++.. + +.++ .
T Consensus 340 -------~~~~~~ifStalpp~~aaa~laal~-l~~~--~~~~r~~L~~n~~~fr~~~----G~~~---~-sPI~-p--- 397 (476)
T PLN02955 340 -------SRGRSFIFSTAIPVPMAAAAYAAVV-VARK--EKWRRKAIWERVKEFKALS----GVDI---S-SPII-S--- 397 (476)
T ss_pred -------HhCCCCeecccccHHHHHHHHHHHH-HHhc--CHHHHHHHHHHHHHHHHhc----CCCC---C-CCEE-E---
Confidence 11122222232222332 3444431 1111 1246788888888888742 3321 1 2222 2
Q ss_pred CCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC---CCcEEEEeec--CHHHHHHHHHHHHHHHHHH
Q 047983 158 SEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL---KDWLRITFAV--EPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~---~~~~Rl~~~~--~~~~l~~~~~~l~~~l~~~ 229 (233)
+.++.+ .....+.+.|.++||.+.+...-.. ...+|+++.. ++++++.+++.|.++....
T Consensus 398 ------I~ig~~------~~a~~~~~~L~~~Gi~v~~i~yPtVP~g~~rLRi~lsA~Ht~edId~lv~~L~~~~~~~ 462 (476)
T PLN02955 398 ------LVVGNQ------EKALKASRYLLKSGFHVMAIRPPTVPPNSCRLRVTLSAAHTTEDVKKLITALSSCLDFD 462 (476)
T ss_pred ------EEeCCH------HHHHHHHHHHHHCCCEEEEECCCCCCCCCceEEEeeCCCCCHHHHHHHHHHHHHHHhhh
Confidence 224322 1444556667788999987432211 3579999986 8999999999998776543
No 163
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.50 E-value=1.5e-12 Score=114.58 Aligned_cols=200 Identities=16% Similarity=0.148 Sum_probs=118.9
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|.++|++||+++|+|++|+... .+..+. ..+..+++.|++|.+|.+| +|++.+++ .+++.+.-....
T Consensus 179 ~~i~~~~~~~~~~~ivD~a~~~g~----~~~~~~---~~~~d~~~~s~~K~~gp~G--~g~l~~~~--~~~~~~~~~~~g 247 (403)
T TIGR01979 179 EEIAKLAHQVGAKVLVDGAQAVPH----MPVDVQ---ALDCDFYVFSGHKMYGPTG--IGVLYGKE--ELLEQMPPFLGG 247 (403)
T ss_pred HHHHHHHHHcCCEEEEEchhhcCc----cccCcc---ccCCCEEEEecccccCCCC--ceEEEEch--HHHhcCCCeecC
Confidence 478999999999999999997532 112222 2234588999999888777 99999886 344321100000
Q ss_pred --hhh---h-HHhhhh-hhhhccCcchH-H-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCC---
Q 047983 81 --SIS---L-NMRMDD-YLLLSESVYTT-V-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPE--- 148 (233)
Q Consensus 81 --~~~---~-~~~~~~-~~~~~~~~~~~-~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~--- 148 (233)
..+ . ...+.. ...+..+.++. . .++...++...+.-.++.+++..+.++.+.+.|++++++.. ..|.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~-~~~~~~~ 326 (403)
T TIGR01979 248 GEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHELTAYALERLGEIPGLRI-YGPRDAE 326 (403)
T ss_pred CCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEE-eCCCCcc
Confidence 000 0 000000 00011111222 1 33333332111112456778888888999999988776664 3332
Q ss_pred --ccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcc--------cCCCCcEEEEeec--CHHHHH
Q 047983 149 --GSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGIT--------VGLKDWLRITFAV--EPSAFE 216 (233)
Q Consensus 149 --~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~--------f~~~~~~Rl~~~~--~~~~l~ 216 (233)
++++.+ .++ +. +...+.+.|+++||.+.+|.. ++..+++|+|++. ++++++
T Consensus 327 ~~~~~v~~----------~~~-----~~--~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~iRiS~~~~~t~~di~ 389 (403)
T TIGR01979 327 DRGGIISF----------NVE-----GV--HPHDVGTILDEEGIAVRSGHHCAQPLMRRFGVPATCRASFYIYNTEEDID 389 (403)
T ss_pred ccCceEEE----------EeC-----Cc--CHHHHHHHHhhCCEEEcchhhhhHHHHHHhCCCCEEEEEeccCCCHHHHH
Confidence 455444 222 11 233455678899999998762 3446799999995 788999
Q ss_pred HHHHHHHHHHHHH
Q 047983 217 IGLGRMKAFYYRH 229 (233)
Q Consensus 217 ~~~~~l~~~l~~~ 229 (233)
.+++.|+++++.+
T Consensus 390 ~l~~~l~~~~~~~ 402 (403)
T TIGR01979 390 ALVEALKKVRKFF 402 (403)
T ss_pred HHHHHHHHHHHHh
Confidence 9999998877653
No 164
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.50 E-value=6.2e-13 Score=117.07 Aligned_cols=186 Identities=11% Similarity=0.046 Sum_probs=109.7
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccc-cccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFV-PMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~-~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|.++|++||+++|+||+|..+.++|.... ......+ +.++ +||.++...+|+||+++++ ++++. .
T Consensus 211 ~~l~~l~~~~gi~lI~DEv~~g~g~~g~~~~~~~~g~~~-D~~~----~~K~l~gg~~~ig~v~~~~--~~~~~---l-- 278 (401)
T PRK00854 211 TRVRELCTANNVTLILDEIQTGLGRTGKLLAEEHEGIEA-DVTL----IGKALSGGFYPVSAVLSNS--EVLGV---L-- 278 (401)
T ss_pred HHHHHHHHHcCCEEEEechhhCCCCCchHhHHhhcCCCC-CEEE----ecccccCCccCeEEEEEcH--HHHhc---c--
Confidence 3689999999999999999998766553110 0111122 2222 4688766558999999987 44421 1
Q ss_pred hhhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcc-cccCCCccEEEEEecC
Q 047983 80 HSISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCIT-CPKKPEGSMFVMYCGS 158 (233)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~~~g~~~~~~~~ 158 (233)
.......+++.++..+.++++.+ + ..++ ....+.++++.+++.+.|++++... ....+.|.++.+
T Consensus 279 ------~~~~~~~t~~~~~~~~aa~~a~L-~-~l~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~g~~~~i---- 344 (401)
T PRK00854 279 ------KPGQHGSTFGGNPLACAVARAAL-K-VLTE--EGMIENAAEMGAYFLEGLRSIRSNIVREVRGRGLMLAV---- 344 (401)
T ss_pred ------cCCCCCCCCCcCHHHHHHHHHHH-H-HHHH--cCHHHHHHHHHHHHHHHHHhhccCceEEEeccceEEEE----
Confidence 11112222333333332444443 2 1111 2356778888888888887753211 112455666655
Q ss_pred CCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEee--cCHHHHHHHHHHHHHHHH
Q 047983 159 EDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFA--VEPSAFEIGLGRMKAFYY 227 (233)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~--~~~~~l~~~~~~l~~~l~ 227 (233)
...+.. . +..+++.. |.++||.+.+.. .+++|++.. .+++++++++++|++++.
T Consensus 345 -----~~~~~~----~-~~~~~~~~-L~~~GV~v~~~~----~~~lR~~p~~~~t~e~i~~~i~~l~~~l~ 400 (401)
T PRK00854 345 -----ELEPEA----G-GARQYCEA-LKERGLLAKDTH----DHTIRLAPPLVITREQVDWALEQIAKVLA 400 (401)
T ss_pred -----EEecCc----h-hHHHHHHH-HHHCCeEEecCC----CCEEEEeCCcccCHHHHHHHHHHHHHHhh
Confidence 111110 1 23445555 456799997632 379999964 589999999999998764
No 165
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.50 E-value=1e-12 Score=116.69 Aligned_cols=190 Identities=12% Similarity=0.103 Sum_probs=108.7
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCcc-ccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHF-VPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|.++|++||+++|+||+++.|..+|... .....+.+ . +.++||.++..|+|+|++++++ ++ + .+.
T Consensus 222 ~~l~~lc~~~g~llI~DEV~tG~GrtG~~~~~~~~~v~P--D---i~t~~K~l~~~G~pigav~~~~--~i-~--~~~-- 289 (425)
T PRK09264 222 QRLAKLCRKHDILLIVDDIQAGCGRTGTFFSFERAGITP--D---IVTLSKSISGYGLPMALVLIKP--EL-D--VWK-- 289 (425)
T ss_pred HHHHHHHHHcCcEEEEechhhCCccccHHHHHhhcCCCC--C---EEEeccccCCCccceEEEEEch--hh-h--ccC--
Confidence 478999999999999999999886665321 11112233 2 3477999887799999999987 22 1 111
Q ss_pred hhhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhc----CCCcccccCCCccEEEEE
Q 047983 80 HSISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKE----IPCITCPKKPEGSMFVMY 155 (233)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~~~~~~g~~~~~ 155 (233)
......+++.++.+.+++++.+-..-.+ .+..+.++++.+++.+.|++ .+.+.. .....|.++|
T Consensus 290 -------~~~~~~T~~gnp~~~aaa~a~l~~~~~~---~~l~~~~~~~g~~l~~~l~~l~~~~~~~~~-~vrg~Gl~~~- 357 (425)
T PRK09264 290 -------PGEHNGTFRGNNLAFVTATAALEEYWSD---DAFEKEVKAKGELVRERLEEIAAKYPGLGA-EVRGRGMMQG- 357 (425)
T ss_pred -------CCccCCCCCCCHHHHHHHHHHHHHHHhh---hHHHHHHHHHHHHHHHHHHHHHHhCCCcee-cceecccEEE-
Confidence 1111122332222222332332010001 12333333444444443332 332211 2233577778
Q ss_pred ecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEee--cCHHHHHHHHHHHHHHHHHHh
Q 047983 156 CGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFA--VEPSAFEIGLGRMKAFYYRHA 230 (233)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~--~~~~~l~~~~~~l~~~l~~~~ 230 (233)
+.++.. .....+.+.+.++||.+.|...++ +.+|++.. .+++++++++++|.+.+++..
T Consensus 358 --------i~l~~~------~~~~~l~~~~~~~Gv~~~~~~~~~--~~lr~~p~l~~t~~ei~~~~~~l~~~l~~~~ 418 (425)
T PRK09264 358 --------IDFGDG------ELAGKIAAEAFENGLIIETSGPED--EVVKLLPPLTIDEEELEEGLDILEEAVAEVL 418 (425)
T ss_pred --------EEecCh------HHHHHHHHHHHHCCCEEeccCCCC--CEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 555321 134455666778899998854332 66777755 489999999999999998764
No 166
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.49 E-value=3.1e-13 Score=119.99 Aligned_cols=203 Identities=14% Similarity=0.079 Sum_probs=111.8
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHS 81 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~ 81 (233)
+|.++|++||+++|+||+|..+..++........+.+ | +.++||.++ .|+++|++++++ ++++.+...
T Consensus 222 ~l~~l~~~~~~llI~DEv~~G~r~g~~~~~~~~~~~p-D----i~~~gK~l~-~G~p~ga~~~~~--~i~~~~~~~---- 289 (426)
T PRK00062 222 GLRELCDEHGALLIFDEVMTGFRVALGGAQGYYGVTP-D----LTTLGKIIG-GGLPVGAFGGRR--EIMEQLAPL---- 289 (426)
T ss_pred HHHHHHHHcCCEEEEeechhccccCCccHHHHhCCCc-c----hHhhhhHhh-CCCcceeeeEHH--HHHHhhccC----
Confidence 6899999999999999999988433211111111222 2 568999977 789999999987 344211000
Q ss_pred hhhHHhhhhhhhhccCcchHHHHHHHHhhh-cHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCCC
Q 047983 82 ISLNMRMDDYLLLSESVYTTVGAVPQILEK-TEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSED 160 (233)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~ 160 (233)
.......+++.++..++++++.+ +. ..++..++.++.....++.+.+..++.+... -..+.|.++.+.+..+.
T Consensus 290 ----~~~~~~~T~~~~p~~~aaa~a~L-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~vrg~G~~~~i~l~~~~ 363 (426)
T PRK00062 290 ----GPVYQAGTLSGNPLAMAAGLATL-KLLKEPGFYEELEALTKRLAEGLKEAAKKAGIPL-TVNRVGSMFGLFFTDEP 363 (426)
T ss_pred ----CCceecccCcCCHHHHHHHHHHH-HHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCce-EEEEecceEEEEEecCC
Confidence 01111122333333332444443 21 1223445555555555555555444453222 13466777765222111
Q ss_pred cccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeecCHHHHHHHHHHHHHHHHHH
Q 047983 161 KCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAVEPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~~~~~l~~~~~~l~~~l~~~ 229 (233)
+.... +. .. +..+....+...+.++||.+.|.. + +-+++++..++++++++++.|.+++++.
T Consensus 364 ~~~~~-~~-~~-~~~~~~~~i~~~l~~~Gv~v~~~~-~---~~~~~~~~~t~~ei~~~~~~l~~~l~~~ 425 (426)
T PRK00062 364 VTNYA-DA-KK-SDTERFARFFHAMLDEGVYLAPSQ-F---EAGFVSAAHTDEDIEKTLEAARKAFAAL 425 (426)
T ss_pred Ccchh-hh-cc-ccHHHHHHHHHHHHHCCeEeecCC-c---CceeeeccCCHHHHHHHHHHHHHHHHhh
Confidence 10000 00 00 000112455566668899998842 1 3467887779999999999999998764
No 167
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.49 E-value=4.9e-13 Score=113.21 Aligned_cols=186 Identities=19% Similarity=0.183 Sum_probs=133.4
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCC-cccccccc-CCccCEEEEccCccccCCCCceEEEEE--ecCCCccccccch
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNT-HFVPMGVF-GSIVPVLTLGSISKRWIVPGWRLGWLV--TSDPNGILQDLGV 76 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~-~~~~~~~~-~~~~~~i~~~s~sK~~~~~G~R~G~~~--~~~~~~~~~~~~~ 76 (233)
++|+++.++.+.+.+.|-+|.+|..+-. ....+..+ .....+++..|+||.|++.|-|+|.+. +++. +... .+
T Consensus 195 ~~l~~~~~~r~lip~~D~AYQGF~~GleeDa~~lR~~a~~~~~~lva~S~SKnfgLYgERVGa~~vva~~~-~~a~--~v 271 (396)
T COG1448 195 QELADLIKERGLIPFFDIAYQGFADGLEEDAYALRLFAEVGPELLVASSFSKNFGLYGERVGALSVVAEDA-EEAD--RV 271 (396)
T ss_pred HHHHHHHHHcCCeeeeehhhhhhccchHHHHHHHHHHHHhCCcEEEEehhhhhhhhhhhccceeEEEeCCH-HHHH--HH
Confidence 3689999999999999999999876532 22233322 223448999999999999999999944 3332 1111 11
Q ss_pred hhhhhhhhHHhhhhhh--hhccCcchHHHHHHHHhhhc-----HHHHHHHHHHHHHHHHHHHHHHhhcC-C--CcccccC
Q 047983 77 AFFHSISLNMRMDDYL--LLSESVYTTVGAVPQILEKT-----EEEFFSKITDILREAADICCDRLKEI-P--CITCPKK 146 (233)
Q Consensus 77 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~~~~~~l~~~L~~~-~--~~~~~~~ 146 (233)
. ..+.... ..+.++...+..++.+|++. +++++..+++++.+.|..+.+.|++. + .+. +..
T Consensus 272 ~--------sqlk~~iR~~ySnPP~~Ga~vva~IL~~p~Lra~W~~El~~Mr~Ri~~mR~~lv~~L~~~~~~~~f~-~i~ 342 (396)
T COG1448 272 L--------SQLKAIIRTNYSNPPAHGAAVVATILNNPELRAEWEQELEEMRQRILEMRQALVDALKALGAPRNFD-FII 342 (396)
T ss_pred H--------HHHHHHHHhccCCCchhhHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccc-hHh
Confidence 1 2222211 23333333336777777654 45788899999999999999999882 2 344 367
Q ss_pred CCccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec-CHHHHHHHHHHHHHH
Q 047983 147 PEGSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV-EPSAFEIGLGRMKAF 225 (233)
Q Consensus 147 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~-~~~~l~~~~~~l~~~ 225 (233)
.+.|||.+ ..+ +.+.+.++.+++||.++..+ |||++. ++++++.+.+.|.++
T Consensus 343 ~Q~GMFsy-----------~Gl--------s~~QV~rLree~~IY~v~sG--------Ri~vaGl~~~ni~~va~ai~~v 395 (396)
T COG1448 343 SQRGMFSY-----------TGL--------SPEQVDRLREEFGIYLVASG--------RINVAGLNTSNIDYVAKAIAAV 395 (396)
T ss_pred hcCceeec-----------CCC--------CHHHHHHHHHhccEEEecCC--------eeeeccCChhhHHHHHHHHHhh
Confidence 88899999 544 78999999999999998643 999997 899999999888765
No 168
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.47 E-value=5.2e-12 Score=109.72 Aligned_cols=198 Identities=12% Similarity=0.096 Sum_probs=117.0
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCcccc-CCCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRW-IVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|.++|++||+++|+|.+++. +..+.++..++. -+++.|++|.+ +.+| +||+++++ ..++++.-. .
T Consensus 149 ~~I~~l~~~~g~~livD~~~~~----g~~~~~~~~~~~---D~~~~s~~K~l~~p~G--~G~l~~~~--~~~~~~~~~-~ 216 (363)
T TIGR02326 149 EAVAKLAHRHGKVTIVDAMSSF----GGIPIDIAELHI---DYLISSANKCIQGVPG--FGFVIARQ--AELAACKGN-A 216 (363)
T ss_pred HHHHHHHHHcCCEEEEEccccc----cCcccchhhcCc---cEEEecCccccccCCc--ceEEEECH--HHHHHhhcC-C
Confidence 3799999999999999988763 222334443333 28889999975 5567 69999987 333211000 0
Q ss_pred hh--hhhHHhhh------hhhhhccCcchHHHHHHHHhhhcHH-HHHHHHHHHHHHHHHHHHHHhhcCCCcccccC--CC
Q 047983 80 HS--ISLNMRMD------DYLLLSESVYTTVGAVPQILEKTEE-EFFSKITDILREAADICCDRLKEIPCITCPKK--PE 148 (233)
Q Consensus 80 ~~--~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~--~~ 148 (233)
.. .++..... ....++.+.+.+ .++.+.++.-.. ...++.+++++++++++.+.|+++ ++..+.+ ..
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~ft~~~~~~-~al~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~ 294 (363)
T TIGR02326 217 RSLSLDLYDQWRCMEDNHGKWRFTSPTHVV-HAFAQALLELEKEGGVAARHQRYQQNQKTLVAGMRAL-GFEPLLDDEIQ 294 (363)
T ss_pred CceeecHHHHHHHHhccCCCCCCCCcHHHH-HHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc-CCeeccCcccC
Confidence 00 00000000 001112222222 333333222112 235667899999999999999886 4332222 23
Q ss_pred ccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEe-ec-CHHHHHHHHHHHHHHH
Q 047983 149 GSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITF-AV-EPSAFEIGLGRMKAFY 226 (233)
Q Consensus 149 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~-~~-~~~~l~~~~~~l~~~l 226 (233)
++...| +.++.. +.+ +...+.+.|+++||.+.||..+. .+++|++. +. +.++++.+++.|.+++
T Consensus 295 ~~~~~~---------~~~~~~--~~~--~~~~v~~~L~~~gi~v~~g~~~~-~~~iRi~~~~~~~~edv~~~l~~l~~~l 360 (363)
T TIGR02326 295 SPIITS---------FYSPED--PDY--RFADFYQRLKEQGFVIYPGKVSQ-VDCFRIGNIGEVDAADITRLLTAIGKAM 360 (363)
T ss_pred CceEEE---------EECCCC--CCC--CHHHHHHHHHHCCEEEECCcCCC-CCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 555666 444321 011 34456666778899999987663 47999995 53 8899999999998875
No 169
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.46 E-value=1.9e-12 Score=114.45 Aligned_cols=188 Identities=12% Similarity=0.083 Sum_probs=113.1
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCcc-ccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHF-VPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|.++|++||+++|+||+++.|..+|... .....+.++ +.++||.++..|+|+||+++++ ++ + .+
T Consensus 218 ~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~~~~~v~PD-----i~~~~K~lg~~G~pigav~~~~--~~-~--~~--- 284 (412)
T TIGR02407 218 QRLEKLCRRHDILLIVDDIQAGCGRTGTFFSFEPAGIEPD-----IVCLSKSISGYGLPLALTLIKP--EL-D--VW--- 284 (412)
T ss_pred HHHHHHHHHcCCEEEEechhhCCCccchhHHhcccCCCCC-----EEEechhccCCccceeEEEEch--hh-h--cc---
Confidence 368999999999999999999886655321 112223332 4468999554499999999987 22 2 11
Q ss_pred hhhhhHHhhhhhhhhccCcchHHH---HHHHHhhhc-HHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEE
Q 047983 80 HSISLNMRMDDYLLLSESVYTTVG---AVPQILEKT-EEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMY 155 (233)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~ 155 (233)
.......+++.++...++ ++..+++++ ..++..++.+.++++.+.+.+.+ +... ...+..|+++|
T Consensus 285 ------~~~~~~~T~~gnpl~~aaa~a~l~~~i~~~~l~~~~~~~g~~l~~~l~~l~~~~---~~~~-~~vrg~Gl~~~- 353 (412)
T TIGR02407 285 ------KPGEHNGTFRGNNLAFVTATAALEYYWSDDAFEKAVQRKSEIIQERLDRIVAEY---PELI-KQVRGRGLMQG- 353 (412)
T ss_pred ------CCCccCCCCCccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhhC---CCce-EeeecceeEEE-
Confidence 111112233322222222 222223222 33555556666666655554443 3222 13455689999
Q ss_pred ecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec--CHHHHHHHHHHHHHHHHH
Q 047983 156 CGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV--EPSAFEIGLGRMKAFYYR 228 (233)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~--~~~~l~~~~~~l~~~l~~ 228 (233)
+.++.+ +....+...+.++||.+.+...+ .+.+|++... +++++++++++|.+.+++
T Consensus 354 --------l~l~~~------~~~~~~~~~~~~~Gv~v~~~~~~--~~~lr~~p~l~~t~~~i~~~~~~l~~~l~~ 412 (412)
T TIGR02407 354 --------IECGDG------DLAGKIAKAAFENGLIIETSGPN--DEVIKLLPPLTIDEETLQQGLDILEQAVEE 412 (412)
T ss_pred --------EEecCh------HHHHHHHHHHHHCCCEEeccCCC--CCEEEEECCCCCCHHHHHHHHHHHHHHHhC
Confidence 666422 13445556667889999874322 3678987774 899999999999998853
No 170
>PLN02721 threonine aldolase
Probab=99.45 E-value=4.3e-12 Score=109.52 Aligned_cols=186 Identities=17% Similarity=0.147 Sum_probs=104.7
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccC-CccCEEEEccCccccCCCCceEEE-EEecCCCccccccchhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFG-SIVPVLTLGSISKRWIVPGWRLGW-LVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~R~G~-~~~~~~~~~~~~~~~~~~ 79 (233)
+|+++|++||++||+||+|......... .+..... ..+ .++.|+||.++. ++|| +++++ ++++. .
T Consensus 162 ~l~~l~~~~g~~livD~a~~~~~~~~~~-~~~~~~~~~~d--~~~~s~sK~l~~---~~G~~~~~~~--~~~~~---~-- 228 (353)
T PLN02721 162 KVGELAKRHGLKLHIDGARIFNASVALG-VPVHRLVKAAD--SVSVCLSKGLGA---PVGSVIVGSK--SFIRK---A-- 228 (353)
T ss_pred HHHHHHHHcCCEEEEEchhhhcchhhhC-CCHHHHhhhCC--EEEEecccccCC---ceeeEEecCH--HHHHh---H--
Confidence 7899999999999999998632211001 1121111 223 334579998764 4687 45554 34321 1
Q ss_pred hhhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCccc-ccCCCccEEEEEecC
Q 047983 80 HSISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITC-PKKPEGSMFVMYCGS 158 (233)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~g~~~~~~~~ 158 (233)
..+......+...... .+.+.+. ..+++...+++ ..++++.+.+.|++++++.. +.+|. +.++|
T Consensus 229 ------~~~~~~~~~~~~~~~~-~~~~~~~--~l~~~~~~~~~-~~~~~~~l~~~L~~~~~~~~~~~~~~-~~~~~---- 293 (353)
T PLN02721 229 ------KRLRKTLGGGMRQVGV-LAAAALV--ALQENVPKLED-DHKKAKLLAEGLNQIKGLRVNVAAVE-TNIVY---- 293 (353)
T ss_pred ------HHHHHhcCCCeehhHH-HHHHHHH--HHHHHHHHHHH-HHHHHHHHHHHHHhCCCcEEecCCcc-ceEEE----
Confidence 1122211111111111 1122221 12333343333 35678899999988766632 23454 45688
Q ss_pred CCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec--CHHHHHHHHHHHHHHHHH
Q 047983 159 EDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV--EPSAFEIGLGRMKAFYYR 228 (233)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~--~~~~l~~~~~~l~~~l~~ 228 (233)
++++... +. +.+.+.+.|.++||.+.|+. .+++|++++. +++++++++++|++++..
T Consensus 294 -----~~~~~~~--~~--~~~~~~~~L~~~gi~v~~~~----~~~lR~~~~~~~~~~~i~~~~~~l~~~~~~ 352 (353)
T PLN02721 294 -----FDITDGS--RI--TAEKLCKSLEEHGVLLMPGN----SSRIRVVTHHQISDSDVQYTLSCFQQAALT 352 (353)
T ss_pred -----EEccCCc--cc--cHHHHHHHHHhCCcEEecCC----CceEEEEecCcCCHHHHHHHHHHHHHHhhc
Confidence 5554210 11 33444555568899999974 4789999973 899999999999987753
No 171
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.44 E-value=9.5e-12 Score=110.06 Aligned_cols=191 Identities=15% Similarity=0.152 Sum_probs=114.8
Q ss_pred ChHHHHHHHcCcEEEEccccCc-cccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGH-LVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~-~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|.++|++||+++|+|++|.. +.+.+..+.++. ...+++.|+||.+ +|.|.||++++++ .+.
T Consensus 183 ~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~-----~~di~~~S~~K~l--~g~~gg~i~~~~~-~~~-------- 246 (416)
T PRK00011 183 KRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVP-----HADVVTTTTHKTL--RGPRGGLILTNDE-ELA-------- 246 (416)
T ss_pred HHHHHHHHHcCCEEEEECcchhcccccCccCCCCC-----CCcEEEecCCcCC--CCCCceEEEeCCH-HHH--------
Confidence 4789999999999999999863 333332222222 1237799999964 7889999999752 233
Q ss_pred hhhhhHHhhhhhhh---hccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEe
Q 047983 80 HSISLNMRMDDYLL---LSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYC 156 (233)
Q Consensus 80 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~ 156 (233)
.+++.... .+........++...+.....+++++.+++++++++++.+.|+++ ++..+..+..++++|
T Consensus 247 ------~~l~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~-- 317 (416)
T PRK00011 247 ------KKINSAVFPGIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAER-GFRVVSGGTDNHLVL-- 317 (416)
T ss_pred ------HHHHHHhCccccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC-CCeeeecCCCCeEEE--
Confidence 22222211 111111121222211112223456888899999999999999886 444321112348888
Q ss_pred cCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCc-ccC-----CCCcEEEEe------ecCHHHHHHHHHHHHH
Q 047983 157 GSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGI-TVG-----LKDWLRITF------AVEPSAFEIGLGRMKA 224 (233)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~-~f~-----~~~~~Rl~~------~~~~~~l~~~~~~l~~ 224 (233)
+.++.. +. +.+.+.+.|+++||.+..+. .+. ....+|++. +.+.++++..++.|++
T Consensus 318 -------i~~~~~---~~--~~~~~~~~L~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l~~ 385 (416)
T PRK00011 318 -------VDLRSK---GL--TGKEAEAALEEANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFKEAEMKEIAELIAD 385 (416)
T ss_pred -------EeCccc---CC--CHHHHHHHHHHcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcCHHHHHHHHHHHHH
Confidence 444311 11 34456677788999997432 121 145789854 2257889999999988
Q ss_pred HHHH
Q 047983 225 FYYR 228 (233)
Q Consensus 225 ~l~~ 228 (233)
++..
T Consensus 386 ~~~~ 389 (416)
T PRK00011 386 VLDN 389 (416)
T ss_pred HHhc
Confidence 7665
No 172
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.41 E-value=1.9e-11 Score=108.41 Aligned_cols=203 Identities=11% Similarity=0.090 Sum_probs=119.7
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|+++|+++|+++|+|++|.. +..+..+..+ +.-+++.|++|.+|.+| +||+++++ .+++++.-....
T Consensus 193 ~~I~~l~~~~g~~vivD~a~~~----g~~~~~~~~~---~~d~~~~s~~K~~gp~G--~G~l~~~~--~~~~~~~p~~~g 261 (424)
T PLN02855 193 EDIVHWAHAVGAKVLVDACQSV----PHMPVDVQTL---GADFLVASSHKMCGPTG--IGFLWGKS--DLLESMPPFLGG 261 (424)
T ss_pred HHHHHHHHHcCCEEEEEhhhhc----CCcCCCchhc---CCCEEEeecccccCCCc--cEEEEEch--hhhhcCCCEecC
Confidence 3789999999999999999963 2222223222 23377999999877666 89999987 444321100000
Q ss_pred -----hhhhH-Hhhhh-hhhhccCcchHH--HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCC---
Q 047983 81 -----SISLN-MRMDD-YLLLSESVYTTV--GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPE--- 148 (233)
Q Consensus 81 -----~~~~~-~~~~~-~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~--- 148 (233)
..... ..+.. ...+..+++... .+++..++...+.-.++.+++.++.++.+.+.|++++++..+.+..
T Consensus 262 ~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~ 341 (424)
T PLN02855 262 GEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIHEYEVELGTYLYEKLSSVPGVRIYGPKPSEG 341 (424)
T ss_pred CCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCcccc
Confidence 00000 00000 011222223322 4444444322233566777888888889999988876665432211
Q ss_pred --ccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhcc-CEEEECCccc--------CCCCcEEEEeec--CHHHH
Q 047983 149 --GSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEE-SIIVLPGITV--------GLKDWLRITFAV--EPSAF 215 (233)
Q Consensus 149 --~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~-gi~v~pg~~f--------~~~~~~Rl~~~~--~~~~l 215 (233)
.+.++. +.++ ++ +.+.+.+.|.++ ||.+..|... +..+++|+|+.. +++++
T Consensus 342 ~~r~~~v~---------~~~~-----~~--~~~~v~~~L~~~~gI~v~~g~~c~~~~~~~~g~~~~iRiS~~~ynt~~di 405 (424)
T PLN02855 342 VGRAALCA---------FNVE-----GI--HPTDLSTFLDQQHGVAIRSGHHCAQPLHRYLGVNASARASLYFYNTKEEV 405 (424)
T ss_pred cCcccEEE---------EEEC-----Cc--CHHHHHHHhcccCCEEEechhhhhHHHHHHhCCCCeEEEEeccCCCHHHH
Confidence 122333 2332 12 334455556555 9999988743 225789999985 89999
Q ss_pred HHHHHHHHHHHHHHh
Q 047983 216 EIGLGRMKAFYYRHA 230 (233)
Q Consensus 216 ~~~~~~l~~~l~~~~ 230 (233)
+..++.|+++++...
T Consensus 406 ~~l~~~l~~~~~~~~ 420 (424)
T PLN02855 406 DAFIHALKDTIAFFS 420 (424)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999887754
No 173
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.41 E-value=2.3e-11 Score=107.32 Aligned_cols=198 Identities=14% Similarity=0.085 Sum_probs=115.9
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh-
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF- 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~- 79 (233)
++|.++|+++|+++++|++|+... .+..+... +.-+++.|++|.+|.+| +||+.+++ .+++.+.-...
T Consensus 184 ~~i~~~~~~~~~~vivD~a~~~g~----~~~~~~~~---~~D~~~~s~~K~~gp~G--~G~l~~~~--~~~~~~~~~~~g 252 (406)
T PRK09295 184 AEMIALAHQHGAKVLVDGAQAVMH----HPVDVQAL---DCDFYVFSGHKLYGPTG--IGILYVKE--ALLQEMPPWEGG 252 (406)
T ss_pred HHHHHHHHHcCCEEEEEcccccCc----cccCchhc---CCCEEEeehhhccCCCC--cEEEEEch--HhHhhCCCcccC
Confidence 378999999999999999997632 22233222 23388899999878777 79999987 34332110000
Q ss_pred ----hhhhhHH--hhhh-hhhhccCcchH-H-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCC--
Q 047983 80 ----HSISLNM--RMDD-YLLLSESVYTT-V-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPE-- 148 (233)
Q Consensus 80 ----~~~~~~~--~~~~-~~~~~~~~~~~-~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-- 148 (233)
...+... .+.. ...+..+++.. . .++...++...+.-.+..+++.++.++++.+.|++++++.. ..|.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~-~~~~~~ 331 (406)
T PRK09295 253 GSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYEQNLMHYALSQLESVPDLTL-YGPQNR 331 (406)
T ss_pred CceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEE-eCCCCC
Confidence 0000000 0000 00111122222 2 33333332212222456677888888899999888766654 2332
Q ss_pred ccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccC--------CCCcEEEEeec--CHHHHHHH
Q 047983 149 GSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVG--------LKDWLRITFAV--EPSAFEIG 218 (233)
Q Consensus 149 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~--------~~~~~Rl~~~~--~~~~l~~~ 218 (233)
++++.+ .++ +. +.+.+...|.++||.+..|+.+. ..+++|+|+.. ++++++..
T Consensus 332 ~~iv~~----------~~~-----~~--~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~~~~~iRiS~~~ynt~~did~l 394 (406)
T PRK09295 332 LGVIAF----------NLG-----KH--HAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRL 394 (406)
T ss_pred ceEEEE----------EEC-----Cc--CHHHHHHHHHhCCeEEeccccchHHHHHHHCCCCEEEEEccCCCCHHHHHHH
Confidence 444443 222 11 33345566789999999987443 24689999995 78999999
Q ss_pred HHHHHHHHH
Q 047983 219 LGRMKAFYY 227 (233)
Q Consensus 219 ~~~l~~~l~ 227 (233)
++.|+++.+
T Consensus 395 ~~~l~~i~~ 403 (406)
T PRK09295 395 VAGLQRIHR 403 (406)
T ss_pred HHHHHHHHH
Confidence 999987643
No 174
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.40 E-value=2.9e-11 Score=105.16 Aligned_cols=200 Identities=17% Similarity=0.107 Sum_probs=113.8
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCcccc-CCCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRW-IVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|.++|+++++++|+|.++ .+ +. .+.++..++. -+++.|++|.+ +.+| +||+++++ .+++++.-. .
T Consensus 151 ~~i~~l~~~~~~~livDa~~-~~--g~-~~~~~~~~~~---d~~v~s~~K~l~g~~G--~G~l~~~~--~~~~~~~~~-~ 218 (368)
T PRK13479 151 DEIAAVAKRHGKRLIVDAMS-SF--GA-IPIDIAELGI---DALISSANKCIEGVPG--FGFVIARR--SELEACKGN-S 218 (368)
T ss_pred HHHHHHHHHcCCEEEEEccc-cc--CC-ccccccccCc---eEEEecCccccccCCC--ceEEEECH--HHHHHhhcC-C
Confidence 37899999999999999554 43 22 2233333322 26678999964 6788 59999987 444321110 0
Q ss_pred hh--hhhHHhhhh---hhhhccCcchHH-HHHHHHhhhc-HHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCC--c-
Q 047983 80 HS--ISLNMRMDD---YLLLSESVYTTV-GAVPQILEKT-EEEFFSKITDILREAADICCDRLKEIPCITCPKKPE--G- 149 (233)
Q Consensus 80 ~~--~~~~~~~~~---~~~~~~~~~~~~-~~~~~~l~~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~--~- 149 (233)
.+ .+....... .......++... .++...++.- .....++.++++.++++.+.+.|+++ ++..+.++. .
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~ 297 (368)
T PRK13479 219 RSLSLDLYDQWAYMEKTGQWRFTPPTHVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRAL-GFEPLLDAEIQSP 297 (368)
T ss_pred CCeeecHHHHHhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc-CCcccCCchhcCc
Confidence 00 000000000 000001122222 3333332211 12245677789999999999999887 444322221 1
Q ss_pred -cEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEe-ec-CHHHHHHHHHHHHHHH
Q 047983 150 -SMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITF-AV-EPSAFEIGLGRMKAFY 226 (233)
Q Consensus 150 -g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~-~~-~~~~l~~~~~~l~~~l 226 (233)
...++ ++... ++ +.+.+.+.|.++||.+.+|..+ ..+++|++. +. ++++++.+++.|.+++
T Consensus 298 ~~~~~~-----------~~~~~--~~--~~~~l~~~L~~~gi~v~~g~~~-~~~~iRis~~~~~t~edi~~~l~~L~~~l 361 (368)
T PRK13479 298 IIVTFH-----------APADP--AY--DFKEFYERLKEQGFVIYPGKLT-QVDTFRIGCIGDVDAADIRRLVAAIAEAL 361 (368)
T ss_pred eEEEEE-----------CCCCC--Cc--CHHHHHHHHHHCCEEEecCCCC-CCCEEEEecCCCCCHHHHHHHHHHHHHHH
Confidence 12233 33211 12 3345555667789999998644 246899986 53 8999999999999998
Q ss_pred HHH
Q 047983 227 YRH 229 (233)
Q Consensus 227 ~~~ 229 (233)
++.
T Consensus 362 ~~~ 364 (368)
T PRK13479 362 YWM 364 (368)
T ss_pred HHc
Confidence 765
No 175
>PRK02948 cysteine desulfurase; Provisional
Probab=99.36 E-value=3e-11 Score=105.62 Aligned_cols=196 Identities=12% Similarity=0.086 Sum_probs=114.1
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCcc-ccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGI-LQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~-~~~~~~~~~ 79 (233)
++|.++|+++|+++++|+++.. +..+..+ ...+..+++.|++|.+|.+| +|++++++. + ... ...
T Consensus 158 ~~I~~l~~~~~~~vivD~~~~~----g~~~~~~---~~~~~d~~~~s~~K~~gp~G--~G~l~~~~~--~~~~~--~~~- 223 (381)
T PRK02948 158 AEIGALLKKYNVLFHSDCVQTF----GKLPIDV---FEMGIDSLSVSAHKIYGPKG--VGAVYINPQ--VRWKP--VFP- 223 (381)
T ss_pred HHHHHHHHHcCCEEEEEChhhc----cccccCc---ccCCCCEEEecHHhcCCCCc--EEEEEEcCC--CCCCC--ccc-
Confidence 3789999999999999976543 1111122 22345578899999999888 899988762 2 110 000
Q ss_pred hhhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCC
Q 047983 80 HSISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSE 159 (233)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~ 159 (233)
.. .....+...+.+.+.. .++...++. ..++.++.++.+++.++++.+.|++++ +... ......+.. +
T Consensus 224 ---~~-~~~~~~~~~t~~~~~~-~a~~~al~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~v~-~~~~~~~~~----~ 291 (381)
T PRK02948 224 ---GT-THEKGFRPGTVNVPGI-AAFLTAAEN-ILKNMQEESLRFKELRSYFLEQIQTLP-LPIE-VEGHSTSCL----P 291 (381)
T ss_pred ---CC-CCCCCcCCCCccHHHH-HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhcCC-CCEE-EeCCCccCc----C
Confidence 00 0000111112222222 333333322 224678889999999999999998873 3221 111111111 0
Q ss_pred CcccccccccccCCCCChHHHHHHHHhccCEEEECCccc--------------CC-----CCcEEEEeec--CHHHHHHH
Q 047983 160 DKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITV--------------GL-----KDWLRITFAV--EPSAFEIG 218 (233)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f--------------~~-----~~~~Rl~~~~--~~~~l~~~ 218 (233)
.. +.+..+ ++ +..+.. ..|.++||.+.+|+.. +. .+++|+|+.. ++++++..
T Consensus 292 ~i--~~~~~~---~~-~~~~~~-~~l~~~gI~v~~g~~c~~~~~~p~~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~l 364 (381)
T PRK02948 292 HI--IGVTIK---GI-EGQYTM-LECNRRGIAISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTT 364 (381)
T ss_pred CE--EEEEeC---CC-CHHHHH-HhcccCCEEEEchHhcCCCCCCCCHHHHHcCCChHHhCceEEEEcCCCCCHHHHHHH
Confidence 00 001111 22 233444 4567889999988742 11 3689999994 78999999
Q ss_pred HHHHHHHHHHH
Q 047983 219 LGRMKAFYYRH 229 (233)
Q Consensus 219 ~~~l~~~l~~~ 229 (233)
++.|.++++..
T Consensus 365 ~~~l~~~~~~~ 375 (381)
T PRK02948 365 IHALETIGNQF 375 (381)
T ss_pred HHHHHHHHHHH
Confidence 99999887655
No 176
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.36 E-value=9.6e-11 Score=102.37 Aligned_cols=192 Identities=15% Similarity=0.074 Sum_probs=117.6
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|.++|+++|+++++|++++. +..+..+...+. -++..|..|.++.+| +|++..++.. .++. .+.
T Consensus 156 ~~I~~l~~~~g~~vivD~~~~~----g~~~~~~~~~~~---D~~~~s~~K~~gp~G--~g~l~v~~~~-~~~p-~~~--- 221 (379)
T TIGR03402 156 EEIGEIAKERGALFHTDAVQAV----GKIPIDLKEMNI---DMLSLSGHKLHGPKG--VGALYIRKGT-RFRP-LLR--- 221 (379)
T ss_pred HHHHHHHHHcCCEEEEECcccc----cccccCcccCCC---CEEEEcHHHcCCCCc--eEEEEECCCC-CCCC-ccc---
Confidence 3789999999999999999974 222223332222 267778889777677 7888777631 1111 000
Q ss_pred hhhhHHhhhhhhhhccCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhc-CCCcccccCCC----ccEEEE
Q 047983 81 SISLNMRMDDYLLLSESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKE-IPCITCPKKPE----GSMFVM 154 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~----~g~~~~ 154 (233)
. ........ ...++... .++.+.++ ...+++++..+++++.++.+.+.|++ ++++....++. +...+|
T Consensus 222 --g--~~~~~~~~-~gt~~~~~~~~l~~al~-~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 295 (379)
T TIGR03402 222 --G--GHQERGRR-AGTENVPGIVGLGKAAE-LATEHLEEENTRVRALRDRLEAGLLARIPDARLNGDPTKRLPNTVNIS 295 (379)
T ss_pred --C--CccCCCcC-CCCccHHHHHHHHHHHH-HHHHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEeCCCccCCCCEEEEE
Confidence 0 00000001 11112222 33333332 22346777788899999999999875 76654322211 234445
Q ss_pred EecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC-------------------CCcEEEEeec--CHH
Q 047983 155 YCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL-------------------KDWLRITFAV--EPS 213 (233)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~-------------------~~~~Rl~~~~--~~~ 213 (233)
++.. +.+.+...|+++||.+.+|..|.. .+.+|+|+.. +++
T Consensus 296 -----------~~~~-------~~~~~~~~l~~~gI~v~~g~~c~~~~~~~~~~~~~lg~~~~~~~~~vR~S~~~~~t~~ 357 (379)
T TIGR03402 296 -----------FEYI-------EGEAILLLLDMEGICASSGSACTSGSLEPSHVLRAMGVPHTAAHGSIRFSLSRYNTEE 357 (379)
T ss_pred -----------ecCC-------CHHHHHHhhccCCEEEEchhhcCCCCCCcCHHHHHcCCChhhcCceEEEEcCCCCCHH
Confidence 3321 334455567889999999987642 2689999996 899
Q ss_pred HHHHHHHHHHHHHHHHh
Q 047983 214 AFEIGLGRMKAFYYRHA 230 (233)
Q Consensus 214 ~l~~~~~~l~~~l~~~~ 230 (233)
+++.+++.|++++++..
T Consensus 358 di~~~~~~l~~~~~~~~ 374 (379)
T TIGR03402 358 DIDYVLEVLPPIIARLR 374 (379)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999887654
No 177
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.34 E-value=4.1e-11 Score=104.44 Aligned_cols=193 Identities=18% Similarity=0.180 Sum_probs=108.2
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCC-CCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIV-PGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~-~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|+++|++||+++|+||+|....... ++ .....|++.|+||.++. ++.+.||+++++. .+.+. +
T Consensus 156 ~~I~~la~~~g~~lIvD~t~~~~~~~~----p~----~~g~di~i~S~sK~~~g~~d~~~G~iv~~~~-~l~~~---~-- 221 (366)
T PRK08247 156 AAIAKIAKKHGLLLIVDNTFYTPVLQR----PL----EEGADIVIHSATKYLGGHNDVLAGLVVAKGQ-ELCER---L-- 221 (366)
T ss_pred HHHHHHHHHcCCEEEEECCCccccccC----ch----hcCCcEEEeecceeccCCCceeeeEEecChH-HHHHH---H--
Confidence 478999999999999999996422211 12 12345999999999865 4679999998742 23321 1
Q ss_pred hhhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCC-CccEEEEEecC
Q 047983 80 HSISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKP-EGSMFVMYCGS 158 (233)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~g~~~~~~~~ 158 (233)
...+.....+.++..+..++..+ +.+....+..++|++.+.+.|++.+++..+..| .||+|.|.+ +
T Consensus 222 ------~~~~~~~g~~~s~~~a~l~~~~l------~tl~~r~~~~~~~a~~l~~~L~~~p~v~~v~~P~~gg~~sf~~-~ 288 (366)
T PRK08247 222 ------AYYQNAAGAVLSPFDSWLLIRGM------KTLALRMRQHEENAKAIAAFLNEQPGVTDVLYPGRGGMLSFRL-Q 288 (366)
T ss_pred ------HHHHHhcCCCCChHHHHHHHhcc------CcHHHHHHHHHHHHHHHHHHHHhCCCeeEEecCCcCcEEEEEE-C
Confidence 12222222222221111111111 233445556799999999999998776533344 899999811 1
Q ss_pred CCcccc-cccccccCCCCChHHHHHHHHhccCEEEECCcccCC-------------CCcEEEEeecCHHHHHHHHHHHHH
Q 047983 159 EDKCLL-KLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL-------------KDWLRITFAVEPSAFEIGLGRMKA 224 (233)
Q Consensus 159 ~~~~~~-~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~-------------~~~~Rl~~~~~~~~l~~~~~~l~~ 224 (233)
. .... ++- ... +...++..+...+.+++.|++.+.. ++-+|+|++-+ +.+..++-|.+
T Consensus 289 ~-~~~~~~~~----~~l-~~~~~~~slg~~~sl~~~p~~~~~~~~~~~~r~~~gi~~~~~R~svGlE--~~~dl~~dl~~ 360 (366)
T PRK08247 289 D-EEWVNPFL----KSL-KLITFAESLGGVESFITYPATQTHADIPEEIRIANGVCNRLLRFSVGIE--NVEDLIADLKQ 360 (366)
T ss_pred C-HHHHHHHH----HcC-CcceEccCCCCCceEEECCcccccccCCHHHHHhcCCCCCeEEEEeccC--CHHHHHHHHHH
Confidence 0 0000 000 000 0112222333456778888866521 46799999963 23455555555
Q ss_pred HHHH
Q 047983 225 FYYR 228 (233)
Q Consensus 225 ~l~~ 228 (233)
++++
T Consensus 361 al~~ 364 (366)
T PRK08247 361 AFKQ 364 (366)
T ss_pred HHhh
Confidence 5543
No 178
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.33 E-value=6e-11 Score=105.85 Aligned_cols=202 Identities=16% Similarity=0.127 Sum_probs=108.0
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHS 81 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~ 81 (233)
+|.++|++||+++|.||++.+|..+|. .......+..+.++ ++||.++. |+++|++++++ + ++ .+.
T Consensus 231 ~lr~lc~~~g~llI~DEV~tGfGRtG~-~~a~~~~gv~PDiv---~~gK~l~~-G~Pigav~~~~--~-~~--~~~---- 296 (442)
T TIGR00709 231 KIREVTRKHDIKLILDEVQAGFGRSGT-MFAFEHAGIEPDFV---VMSKAVGG-GLPLAVLLIAP--E-FD--AWQ---- 296 (442)
T ss_pred HHHHHHHHcCCEEEEeccccCCCCCCc-hhHHHHcCCCCcEE---EEcccccC-CcccEEEEEch--H-Hh--ccC----
Confidence 689999999999999999999977763 22222223222333 38999876 89999999987 2 22 111
Q ss_pred hhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhc----CCCcccccCCCccEEEEEec
Q 047983 82 ISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKE----IPCITCPKKPEGSMFVMYCG 157 (233)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~~~~~~g~~~~~~~ 157 (233)
. .....+++.++...+++++.+ +.-.++ ...+.++++.+++.+.|++ .+.+.. +...|.++..-+-
T Consensus 297 ----~-~~~~~T~~gnpla~aaa~a~L-~~i~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~v~~-vrG~Gl~~~ie~~ 366 (442)
T TIGR00709 297 ----P-AGHTGTFRGNQLAMVTGTEAL-NYWKDD---NLAQNAQERGERITSFLDDMIKEHPCIGN-VRGRGLMQGIMIV 366 (442)
T ss_pred ----C-CcCCCCCCcCHHHHHHHHHHH-HHHHhc---CHHHHHHHHHHHHHHHHHHHHHhCCCeee-eeccceEEEEEEc
Confidence 1 111223333334433444443 211111 2233444444444444443 332221 3344444433111
Q ss_pred CCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEee--cCHHHHHHHHHHHHHHHHHHhh
Q 047983 158 SEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFA--VEPSAFEIGLGRMKAFYYRHAK 231 (233)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~--~~~~~l~~~~~~l~~~l~~~~~ 231 (233)
+++.. -... ...+...+-...+...+.++||.+.+.... .+.+|+... .++++++++++++.+.+++..+
T Consensus 367 ~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~--~~~l~~~Ppl~it~~ei~~~~~~l~~~l~~~~~ 438 (442)
T TIGR00709 367 DERQS-KDAT-GAYPRDCELAAAIQGACFENGLLLETGGRE--GEVFRLLCPITIDQEECEEGISRFKQAVEEALA 438 (442)
T ss_pred cCccc-cccc-ccCCcchHHHHHHHHHHHHCCeEEeecCCC--CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 11000 0000 000000011344555566889999774322 367787655 4999999999999999987643
No 179
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.33 E-value=6.1e-11 Score=104.26 Aligned_cols=199 Identities=11% Similarity=0.000 Sum_probs=110.5
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCC---ccccccccCC-ccCEEEEccCccccCCCCceEEEEEecCCCccccccch
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNT---HFVPMGVFGS-IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGV 76 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~---~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~ 76 (233)
++|+++|++||+++|+||+|+ +...+. .......+.+ .+..+++.|+||.++..| ||+++++ ++++ .
T Consensus 158 ~~i~~l~~~~g~~livDe~~~-~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~g~~g---g~v~~~~--~~~~---~ 228 (392)
T PLN03227 158 KELVALKEEFHYRLILDESFS-FGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAFGSVG---GMTVGSE--EVVD---H 228 (392)
T ss_pred HHHHHHHHHcCCEEEEECccc-ccccCCCCCcHHHHcCCCCCCCceEEEeechhhhhccC---cEEecCH--HHHH---H
Confidence 368999999999999999998 332222 1111111211 233588889999866555 9998876 3332 1
Q ss_pred hhhhhhhhHHhhhhhhhhccCcchHH--HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCC------
Q 047983 77 AFFHSISLNMRMDDYLLLSESVYTTV--GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPE------ 148 (233)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~------ 148 (233)
. .......+++.+.++.. ++.+++.. .. ...+.++.++++.+++.+.|++. +........
T Consensus 229 ~--------~~~~~~~~~~~~~~p~~~~aa~~al~~-~~--~~~~~~~~l~~~~~~l~~~L~~~-~~~~~~~~rg~~~~~ 296 (392)
T PLN03227 229 Q--------RLSGSGYCFSASAPPFLAKADATATAG-EL--AGPQLLNRLHDSIANLYSTLTNS-SHPYALKLRNRLVIT 296 (392)
T ss_pred H--------HHhCcCccccCCCCHHHHHHHHHHHHH-Hh--cCHHHHHHHHHHHHHHHHHHHhc-CCccccccccccccC
Confidence 1 11112223333333322 44444421 11 12456778888899999888752 111001111
Q ss_pred ---ccEEEEEecCCCccccccccccc-CCCCC--hHHHHHHHHhccCEEEECCc-------ccCCCCcEEEEeec--CHH
Q 047983 149 ---GSMFVMYCGSEDKCLLKLNYSLL-EGINS--DTEFALKLAKEESIIVLPGI-------TVGLKDWLRITFAV--EPS 213 (233)
Q Consensus 149 ---~g~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~ll~~~gi~v~pg~-------~f~~~~~~Rl~~~~--~~~ 213 (233)
.+..+. +.+..... ....+ ....+.+.+.++|+.+.+.. .+-+...+|+++.. +++
T Consensus 297 ~~~~~~i~~---------i~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~~~~~~~~P~~~iR~~~~~~~t~e 367 (392)
T PLN03227 297 SDPISPIIY---------LRLSDQEATRRTDETLILDQIAHHSLSEGVAVVSTGGHVKKFLQLVPPPCLRVVANASHTRE 367 (392)
T ss_pred CCCCCCEEE---------EEeCCHHHhhhhhhhhHHHHHHHHHHHCCCEEEecccccCCcCCCCCCceEEEEecCCCCHH
Confidence 122333 22211000 00000 11345556667899987522 12335779999996 899
Q ss_pred HHHHHHHHHHHHHHHH
Q 047983 214 AFEIGLGRMKAFYYRH 229 (233)
Q Consensus 214 ~l~~~~~~l~~~l~~~ 229 (233)
+++++++.|++++++.
T Consensus 368 ei~~~~~~l~~~~~~~ 383 (392)
T PLN03227 368 DIDKLLTVLGEAVEAI 383 (392)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999998765
No 180
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.33 E-value=3e-11 Score=107.29 Aligned_cols=193 Identities=10% Similarity=0.058 Sum_probs=103.2
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|.++|++||+++|+||++.++..+|... .....+- ..-+.++||.++..++++|++++++ ++.+. +..
T Consensus 224 ~~l~~lc~~~g~llI~DEv~tg~gr~G~~~-a~~~~~v---~pDi~~~~K~l~gG~~p~~av~~~~--~i~~~--~~~-- 293 (423)
T PRK05964 224 AELRRICDRHGVLLIFDEIATGFGRTGTLF-ACEQAGV---SPDIMCLSKGLTGGYLPLAATLCTA--EIFEA--FYS-- 293 (423)
T ss_pred HHHHHHHHHcCCEEEEechhhCCCcCcchh-HHHhcCC---CCCeeeeehhhhcCcccceEEEEcH--HHHHh--hhc--
Confidence 368999999999999999999886665321 1111111 1224578999876668999999877 34321 100
Q ss_pred hhhhHHhhhhhhhhccCcchHHHHHHHHhhh-cHHHHHHHHHHHHHHHHHHHHHHhhc---CCCcccccCCCccEEEEEe
Q 047983 81 SISLNMRMDDYLLLSESVYTTVGAVPQILEK-TEEEFFSKITDILREAADICCDRLKE---IPCITCPKKPEGSMFVMYC 156 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~l~~~L~~---~~~~~~~~~~~~g~~~~~~ 156 (233)
...........+++.++...+++.+.+ +. ..+++.++ +.+.-+.+.+.|++ .+.+.. .... |..+.
T Consensus 294 -~~~~~~~~~~~T~~~np~~~aaa~a~l-~~l~~~~~~~~----~~~~g~~l~~~l~~l~~~~~i~~-vrg~-Gl~~~-- 363 (423)
T PRK05964 294 -DDRAKAFMHSPSYTANPLACAAANASL-DLFEDEPVLER----VAALSAGLAEGLEPFRDLPGVAD-VRVL-GAIGA-- 363 (423)
T ss_pred -CCcccccccCCCCCcCHHHHHHHHHHH-HHHHhcCHHHH----HHHHHHHHHHHHHhhccCCCeEE-eecc-cEEEE--
Confidence 000000001111222222222333433 21 11223333 33334444444433 332221 2233 34434
Q ss_pred cCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEee--cCHHHHHHHHHHHHHHHHH
Q 047983 157 GSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFA--VEPSAFEIGLGRMKAFYYR 228 (233)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~--~~~~~l~~~~~~l~~~l~~ 228 (233)
+.+.... . ......+.+.|.++||.+.|.. +.+|++.. .++++++++++.+.+++++
T Consensus 364 -------i~l~~~~--~-~~~~~~l~~~l~~~Gv~v~~~~-----~~lR~~p~l~~t~edId~~v~~l~~al~~ 422 (423)
T PRK05964 364 -------VELDRPV--L-ERDGPALRAFALERGVLLRPLG-----NTIYLMPPYIITAEELDRITDAIVEVADE 422 (423)
T ss_pred -------EEeccCc--c-hhHHHHHHHHHHHCCeEEEecC-----CEEEEeCCcccCHHHHHHHHHHHHHHHhh
Confidence 2332110 0 0023455566678899998732 57899877 5999999999999999876
No 181
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.32 E-value=1.7e-10 Score=100.97 Aligned_cols=193 Identities=16% Similarity=0.095 Sum_probs=118.3
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|.++|+++|+++++|+++.. +..+..+...+. -+++.|.+|.+|.+| +|++..++... +.. .+.
T Consensus 160 ~~I~~la~~~g~~~ivD~a~~~----g~~~~~~~~~~~---D~~~~s~~K~~gp~G--~g~l~vr~~~~-~~p-~~~--- 225 (382)
T TIGR03403 160 KEIGEICKERGVLFHTDAVQAI----GKIPVDVQKAGV---DFLSFSAHKFHGPKG--VGGLYIRKGVE-LTP-LFH--- 225 (382)
T ss_pred HHHHHHHHHcCCEEEEechhhc----CCCccCccccCC---CEEEEcchhhCCCCc--eEEEEECCCCC-CCC-ccc---
Confidence 3789999999999999999774 222122222222 278899999888788 58888776311 111 000
Q ss_pred hhhhHHhhhhhhhhccCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCC---ccEEEEEe
Q 047983 81 SISLNMRMDDYLLLSESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPE---GSMFVMYC 156 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~---~g~~~~~~ 156 (233)
+.......... .++... .+++..++ ...++++...+++++.++++.+.|++++++.. ..+. .+.++.
T Consensus 226 ---g~~~~~~~~~g--t~~~~~~~al~~al~-~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~-~~~~~~~~~~~~~-- 296 (382)
T TIGR03403 226 ---GGEHMGGRRSG--TLNVPYIVAMGEAMR-LANEYLDFEKSHVRRLRDRLEDALLELPDVFV-VGDREHRVPNTIL-- 296 (382)
T ss_pred ---CCCCCCCcccC--CcChHHHHHHHHHHH-HHHHhHHHHHHHHHHHHHHHHHHHhcCCCEEE-ECCCCCCcCCEEE--
Confidence 00001111111 122222 34443332 22345777789999999999999988877765 3332 122434
Q ss_pred cCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC-------------------CCcEEEEeec--CHHHH
Q 047983 157 GSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL-------------------KDWLRITFAV--EPSAF 215 (233)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~-------------------~~~~Rl~~~~--~~~~l 215 (233)
+.++ ++ +.+.+...|.++||.+..|+.+.. .+.+|+|+.. +++++
T Consensus 297 -------~~~~-----~~--~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~v~~~~g~~~~~~~~~iR~s~~~~~t~~di 362 (382)
T TIGR03403 297 -------ISIK-----GV--EGEAMLWDLNKAGIAASTGSACASEDLEANPVMVAIGADKELAHTAIRLSLSRFTTEEEI 362 (382)
T ss_pred -------EEeC-----CC--CHHHHHHhhccCCEEEEchhccCCCCCCcCHHHHHcCCChHHhCeeEEEECCCCCCHHHH
Confidence 2232 22 333444457788999998765521 2569999995 89999
Q ss_pred HHHHHHHHHHHHHHh
Q 047983 216 EIGLGRMKAFYYRHA 230 (233)
Q Consensus 216 ~~~~~~l~~~l~~~~ 230 (233)
+..++.|++++++.+
T Consensus 363 d~~~~~l~~~~~~~~ 377 (382)
T TIGR03403 363 DYTIEVFKKAVQRLR 377 (382)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999887754
No 182
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.31 E-value=6.8e-11 Score=102.96 Aligned_cols=194 Identities=16% Similarity=0.110 Sum_probs=108.4
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|+++|++||++|++|++|.... .+.++..+. .-+++.|.+|.++. .++||+++++ .+++.+.-....
T Consensus 159 ~~i~~~~~~~~~~li~D~a~~~~~----~~~~~~~~~---~d~~~~s~~K~~~~--~g~g~~~~~~--~~~~~~~~~~~g 227 (373)
T cd06453 159 KEIGEIAHEAGVPVLVDGAQSAGH----MPVDVQDLG---CDFLAFSGHKMLGP--TGIGVLYGKE--ELLEEMPPYGGG 227 (373)
T ss_pred HHHHHHHHHcCCEEEEEhhhhcCc----eeeeccccC---CCEEEeccccccCC--CCcEEEEEch--HHhhcCCCeecC
Confidence 478999999999999999987422 111222222 23666788998765 5589999987 444321110000
Q ss_pred h--hhh----HHhhhh-hhhhcc-CcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccC--CCc
Q 047983 81 S--ISL----NMRMDD-YLLLSE-SVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKK--PEG 149 (233)
Q Consensus 81 ~--~~~----~~~~~~-~~~~~~-~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~--~~~ 149 (233)
. .+. ...... ...+.. .++... .++.+.++.-.+.-.+++++..+++++++.+.|++++++..+.. ..+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ 307 (373)
T cd06453 228 GEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEIPGVRVYGDAEDRA 307 (373)
T ss_pred CCccccccccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccC
Confidence 0 000 000000 000111 122211 33333222222233466777888888999999988766554222 223
Q ss_pred cEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCccc--------CCCCcEEEEeec--CHHHHHHHH
Q 047983 150 SMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITV--------GLKDWLRITFAV--EPSAFEIGL 219 (233)
Q Consensus 150 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f--------~~~~~~Rl~~~~--~~~~l~~~~ 219 (233)
+ +++ +.++ +. +.+.+.+.|+++||.+.+|..+ +..+++|+|++. +++++++++
T Consensus 308 ~-~~~---------~~~~-----~~--~~~~i~~~l~~~gi~i~~g~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~~~ 370 (373)
T cd06453 308 G-VVS---------FNLE-----GI--HPHDVATILDQYGIAVRAGHHCAQPLMRRLGVPGTVRASFGLYNTEEEIDALV 370 (373)
T ss_pred C-eEE---------EEEC-----Cc--CHHHHHHHHHHCCEEeccCccchhHHHHHhCCCCeEEEEecCCCCHHHHHHHH
Confidence 3 444 3332 11 3444555666789999887653 235799999995 788888877
Q ss_pred HHH
Q 047983 220 GRM 222 (233)
Q Consensus 220 ~~l 222 (233)
+.|
T Consensus 371 ~~l 373 (373)
T cd06453 371 EAL 373 (373)
T ss_pred hhC
Confidence 653
No 183
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.29 E-value=6.6e-11 Score=101.51 Aligned_cols=182 Identities=14% Similarity=0.011 Sum_probs=100.4
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEE-ecCCCccccccchhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLV-TSDPNGILQDLGVAFFH 80 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~-~~~~~~~~~~~~~~~~~ 80 (233)
+|+++|+++|+++|+||+|..+....... ++........ +++.|+||.|++|| |+++ +++ ++++.+
T Consensus 150 ~i~~~~~~~~~~livDea~~~~~~~~~~~-~~~~~~~~~d-~~~~s~sK~~~~~~---g~~~~~~~--~~~~~~------ 216 (338)
T cd06502 150 AISALAKENGLPLHLDGARLANAAAALGV-ALKTYKSGVD-SVSFCLSKGGGAPV---GAVVVGNR--DFIARA------ 216 (338)
T ss_pred HHHHHHHHcCCeEeechHHHHHHHHhcCC-CHHHHHhcCC-EEEEeccccCCCcc---ceEEECCH--HHHHHH------
Confidence 68999999999999999987543221111 2222222223 45779999999888 6644 444 343211
Q ss_pred hhhhHHhhhhhhhhccCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCC
Q 047983 81 SISLNMRMDDYLLLSESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSE 159 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~ 159 (233)
.........+.+.+... .+....++.. .+ .+.++.+.++++++.+.|++++. .. .++.+++.+.
T Consensus 217 -----~~~~~~~~~~~~~~~~~~~a~~~~L~~~--~~-~~~~~~~~~~~~~l~~~L~~~~~-~~-~~~~~~~~~v----- 281 (338)
T cd06502 217 -----RRRRKQAGGGMRQSGFLAAAGLAALEND--LW-LRRLRHDHEMARRLAEALEELGG-LE-SEVQTNIVLL----- 281 (338)
T ss_pred -----HHHHHHhCCChhhHHHHHHHHHHHhcCc--hH-HHHHHHHHHHHHHHHHHHHhcCC-Cc-ccccCCeEEE-----
Confidence 11111111111112222 2222223222 22 34556777778999999988744 32 4555555543
Q ss_pred CcccccccccccCCCCChHHHHHHHH--hccCEEEECCcccCCCCcEEEEeec--CHHHHHHHHHHHHH
Q 047983 160 DKCLLKLNYSLLEGINSDTEFALKLA--KEESIIVLPGITVGLKDWLRITFAV--EPSAFEIGLGRMKA 224 (233)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~ll--~~~gi~v~pg~~f~~~~~~Rl~~~~--~~~~l~~~~~~l~~ 224 (233)
+.+... . ....+..++. .++|+.+.+... +++|++... +++++++.++.+.+
T Consensus 282 -----~~~~~~--~--~~~~l~~~l~~~~~~gi~~~~~~~----~~lRi~~~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 282 -----DPVEAN--A--VFVELSKEAIERRGEGVLFYAWGE----GGVRFVTHWDTTEEDVDELLSALKA 337 (338)
T ss_pred -----ecCCcc--H--HHHHHHHHHHHhhhCCEEEEecCC----CeEEEEeecCCCHHHHHHHHHHHhc
Confidence 222110 0 0112222222 267999987432 799999984 78889988888754
No 184
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.29 E-value=1.6e-10 Score=100.34 Aligned_cols=194 Identities=14% Similarity=0.128 Sum_probs=102.3
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|+++|+++|+++|+|++|.... .+.+...+ +..+++.|++|.++. +.|+||+++++ .+++++... .
T Consensus 159 ~~i~~~~~~~~~~vivD~a~~~g~----~~~~~~~~---~~d~~~~s~~K~l~~-~~~~G~l~~~~--~~~~~l~~~--~ 226 (361)
T cd06452 159 KKIAKVCHEYGVPLLLNGAYTVGR----MPVSGKEL---GADFIVGSGHKSMAA-SAPIGVLATTE--EWADIVFRT--S 226 (361)
T ss_pred HHHHHHHHHcCCeEEEECCcccCC----cCCCHHHc---CCCEEEecCCccccC-CCCeEEEEECH--HHHHHHhcc--c
Confidence 368999999999999999998521 11122222 345899999999874 55999999987 454321100 0
Q ss_pred hhhhHHhhhhhhhhccCcc-hHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccc-CCCccEEEEEec
Q 047983 81 SISLNMRMDDYLLLSESVY-TTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPK-KPEGSMFVMYCG 157 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~g~~~~~~~ 157 (233)
.. ..+........... ... .+++++ . ...++++...+. .++++++.+.|++++++..+. .+....++.
T Consensus 227 ~~---~~~~~~~~~~~~~~~~~~~~~~~al-~-~~~~~~~~~~~~-~~~~~~l~~~L~~l~g~~v~~~~~~~~n~~~--- 297 (361)
T cd06452 227 QM---FKIKEVELLGCTLRGAPLVTLMASF-P-HVKERVKRWDEE-VEKARWFVAELEKIEGIKQLGEKPKNHDLMF--- 297 (361)
T ss_pred cc---cccceeeeeccccCchHHHHHHHHH-H-HHHHHHHHHHHH-HHHHHHHHHHHhcCCCeEEECCCCCCCceEE---
Confidence 00 00000000111111 111 222222 1 112333333333 345578889998886665421 122333444
Q ss_pred CCCcccccccccccC----CCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEee-cCHHHHHHHHHHHHHHH
Q 047983 158 SEDKCLLKLNYSLLE----GINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFA-VEPSAFEIGLGRMKAFY 226 (233)
Q Consensus 158 ~~~~~~~~~~~~~~~----~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~-~~~~~l~~~~~~l~~~l 226 (233)
++.+ ... ........+.+.|+++||.+.+ .+...++|++.. .++++++.+++.|+++.
T Consensus 298 ------~~~~--~~~~~~~~~~~~~~~~~~~L~~~gI~~~~---~~~~~~~ri~~~g~~~e~~~~l~~al~~~~ 360 (361)
T cd06452 298 ------FETP--SFDEIAKKHKRRGYFLYSELKKRGIHGIK---PGLTRYFKLSTYGLTWEQVEYVVDAFKEIA 360 (361)
T ss_pred ------EEcC--CcchhhhhccccchhHHHHHHHcCceEEc---CCCceEEEEEecCCCHHHHHHHHHHHHHHh
Confidence 2222 100 0000112355556677999532 233568999883 37888888888887653
No 185
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.29 E-value=1.9e-10 Score=100.00 Aligned_cols=194 Identities=16% Similarity=0.055 Sum_probs=111.0
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCC-CccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGN-THFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|.++|+++|+++++|++|..+..+- .....+ ......-..+..|..| |+.+|.++|+++..++ .+++.+...
T Consensus 171 ~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~-~~~~~~vd~~~~s~~K-~~~a~~~~G~~~~~~~-~~~~~l~~~-- 245 (371)
T PRK13520 171 PELSKIALENGIFLHVDAAFGGFVIPFLDDPPNF-DFSLPGVDSITIDPHK-MGLAPIPAGGILFRDE-SYLDALAVD-- 245 (371)
T ss_pred HHHHHHHHHcCCCEEEEecchhHHHHhhcCCCCc-cccCCCCceEEECCcc-ccCccCCceEEEEcCH-HHHHhhccc--
Confidence 479999999999999999999765321 111111 1111111233446678 5888899999887652 233211000
Q ss_pred hhhhhHHhhh---hhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEe
Q 047983 80 HSISLNMRMD---DYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYC 156 (233)
Q Consensus 80 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~ 156 (233)
. .... ++...+........++...++.-..+..++.++...++++++.+.|+++ ++.....|..+ ++.
T Consensus 246 ~-----~~~~~~~~~~~~gt~~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~-~v~-- 316 (371)
T PRK13520 246 T-----PYLTSKKQATLTGTRSGAGVAATYAVMKYLGREGYRKVVERCMENTRWLAEELKER-GFEPVIEPVLN-IVA-- 316 (371)
T ss_pred C-----ccccCCCCcceEeeccChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCce-EEE--
Confidence 0 0000 0000000111112333333322223445778888999999999999887 55412445544 444
Q ss_pred cCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec--CHHHHHHHHHHHHHHHH
Q 047983 157 GSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV--EPSAFEIGLGRMKAFYY 227 (233)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~--~~~~l~~~~~~l~~~l~ 227 (233)
++++ +.+.+.+.|.++||.+.++. ..+++|+++.. ++++++..++.|+++++
T Consensus 317 -------~~~~---------~~~~v~~~L~~~gi~v~~~~---~~~~iRis~~~~~t~edi~~~~~~l~~~~~ 370 (371)
T PRK13520 317 -------FDDP---------NPDEVREKLRERGWRVSVTR---CPEALRIVCMPHVTREHIENFLEDLKEVKK 370 (371)
T ss_pred -------EecC---------CHHHHHHHHHHCCceeccCC---CCCEEEEEEECCCCHHHHHHHHHHHHHHhh
Confidence 2232 23444555667799998743 24689999873 88999999999988765
No 186
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.29 E-value=1.6e-10 Score=101.50 Aligned_cols=187 Identities=16% Similarity=0.106 Sum_probs=105.2
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|.++|++||+++|+|+++.. +.....+ ...+.-+++.|++|.+ |.|+||+++++ .+++.+.-. .
T Consensus 176 ~~i~~~~~~~~~~~ivD~a~~~----~~~~~~~---~~~~~d~~~~s~~K~~---g~~~G~l~~~~--~~~~~l~~~--~ 241 (397)
T TIGR01976 176 AAITELVHAAGALVVVDAVHYA----PHGLIDV---QATGADFLTCSAYKFF---GPHMGILWGRP--ELLMNLPPY--K 241 (397)
T ss_pred HHHHHHHHHcCCEEEEehhhhc----cccCCCH---HHcCCCEEEEechhhc---CCceEEEEEcH--HHHhhCCCc--c
Confidence 4789999999999999999753 2221122 2223336668999986 45799999987 444321110 0
Q ss_pred hhhhHHhhhhh-hhhccCcchHH------HHHHHHhhhcH----------HHHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 047983 81 SISLNMRMDDY-LLLSESVYTTV------GAVPQILEKTE----------EEFFSKITDILREAADICCDRLKEIPCITC 143 (233)
Q Consensus 81 ~~~~~~~~~~~-~~~~~~~~~~~------~~~~~~l~~~~----------~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 143 (233)
.. ...... ..+..+.++.. .++..+.+.+. .+..++.+++..+.++++.+.|++++++..
T Consensus 242 ~~---~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~ 318 (397)
T TIGR01976 242 LT---FSYDTGPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEYLLVGLSDLPGVTL 318 (397)
T ss_pred cc---CccCCCcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 00 000000 00111112211 22222211110 113567778888888899999988765654
Q ss_pred ccC----CCccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccC-----------CCCcEEEEe
Q 047983 144 PKK----PEGSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVG-----------LKDWLRITF 208 (233)
Q Consensus 144 ~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~-----------~~~~~Rl~~ 208 (233)
+.+ +.++ ++. +.++ +. +...+.+.|+++||.+..|..++ ..+++|+|+
T Consensus 319 ~~~~~~~~~~~-~~~---------~~~~-----~~--~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~iRis~ 381 (397)
T TIGR01976 319 YGVARLAARVP-TVS---------FTVH-----GL--PPQRVVRRLADQGIDAWAGHFYAVRLLRRLGLNDEGGVVRVGL 381 (397)
T ss_pred eCCCCccCCCc-eEE---------EEeC-----Cc--CHHHHHHHHHHCCeEEEeCccchHHHHHHhCCCCCCCeEEEEe
Confidence 222 1333 444 2232 11 33445566778899999886653 146899999
Q ss_pred ec--CHHHHHHHHHH
Q 047983 209 AV--EPSAFEIGLGR 221 (233)
Q Consensus 209 ~~--~~~~l~~~~~~ 221 (233)
.. ++++++.+++.
T Consensus 382 ~~~~t~~di~~l~~~ 396 (397)
T TIGR01976 382 AHYNTAEEVDRLLEA 396 (397)
T ss_pred eccCCHHHHHHHHHh
Confidence 75 67777777664
No 187
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.27 E-value=1.7e-10 Score=101.36 Aligned_cols=194 Identities=18% Similarity=0.123 Sum_probs=107.7
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCC----CceEEEEEecCCCccccccch
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVP----GWRLGWLVTSDPNGILQDLGV 76 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~----G~R~G~~~~~~~~~~~~~~~~ 76 (233)
++|.++|++||+++|+|+++....... .. +..+..+++.|++|.+ .| |+|+||+.+++ .+++.+..
T Consensus 179 ~~i~~la~~~g~~livD~~~~~~~~~~----~~---~~~~~d~~~~s~~K~~-~p~g~Ggp~~g~l~~~~--~~~~~~~~ 248 (398)
T cd00613 179 KEIADIAHSAGALVYVDGDNLNLTGLK----PP---GEYGADIVVGNLQKTG-VPHGGGGPGAGFFAVKK--ELVRFLPG 248 (398)
T ss_pred HHHHHHHHhcCCEEEEEeccccccCCC----Ch---HHcCCCEEEeeccccC-CCCCCCCCceeEEEEhh--hhHhhCCC
Confidence 378999999999999999876432111 11 1223458999999987 65 89999999987 34432100
Q ss_pred hhhh--h-hhhHH------h----hh--hhhhhc-cCcchHH--HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 047983 77 AFFH--S-ISLNM------R----MD--DYLLLS-ESVYTTV--GAVPQILEKTEEEFFSKITDILREAADICCDRLKEI 138 (233)
Q Consensus 77 ~~~~--~-~~~~~------~----~~--~~~~~~-~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 138 (233)
.... . .+... . .. ...+.+ .+..... .+.+.+ ....++.+++.++.++++++++.+.|+++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l-~~~~~~g~~~~~~~~~~~~~~l~~~L~~~ 327 (398)
T cd00613 249 RLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYI-VYLGPEGLKEIAERAHLNANYLAKRLKEV 327 (398)
T ss_pred CeeccccccCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHH-HHhCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 0000 0 00000 0 00 000000 0111111 222222 22234567788999999999999999887
Q ss_pred CCcccccCCCccEE--EEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec--CHHH
Q 047983 139 PCITCPKKPEGSMF--VMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV--EPSA 214 (233)
Q Consensus 139 ~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~--~~~~ 214 (233)
+... .+.+.++ ++ ++++... +. +...+.+.|.++||.+.... ....+.+|++... ++++
T Consensus 328 ~~~~---~~~~~~~~~v~---------~~~~~~~--~~--~~~~~~~~L~~~gi~~~~~~-~~~~~~lRis~~~~~t~ed 390 (398)
T cd00613 328 GGVL---PFNGPFFHEFV---------LRLPPLY--GI--RAEDLAKALIDGGFHAPTMY-LPVDGTLMIEPTETETKEE 390 (398)
T ss_pred CCcc---cCCCCeeEEEE---------EEcCCcc--hH--HHHHHHHhhhhcCccccccc-cCCCCeEEEEcCCCCCHHH
Confidence 5542 2334444 34 3333100 11 33444444567798764421 1124789998885 7889
Q ss_pred HHHHHHHH
Q 047983 215 FEIGLGRM 222 (233)
Q Consensus 215 l~~~~~~l 222 (233)
++++++.|
T Consensus 391 id~~~~~L 398 (398)
T cd00613 391 LDALLEAL 398 (398)
T ss_pred HHHHHHhC
Confidence 98887653
No 188
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.27 E-value=3.4e-10 Score=98.75 Aligned_cols=188 Identities=14% Similarity=0.049 Sum_probs=105.9
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|.++|+++|+++++||+|+...++.........+...+..+.+.|+||.+|..| +.+++.+ ++.+ .+.
T Consensus 163 ~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~~g~~G---~~vl~~~--~~~~--~~~--- 232 (370)
T PRK05937 163 EQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKALGSMG---AALLSSS--EVKQ--DLM--- 232 (370)
T ss_pred HHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCcEEEEechhhhhcCc---eEEEcCH--HHHH--HHH---
Confidence 47999999999999999999964443221101111222222367899999999888 3344444 2221 111
Q ss_pred hhhhHHhhhhhhhhccCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCC
Q 047983 81 SISLNMRMDDYLLLSESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSE 159 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~ 159 (233)
.....+ .++.+.++.. .++.+.++. ..+.....++.+++.++++.+.|+... . .+ ...+.
T Consensus 233 -----~~~~~~-~~s~~~~~~~~~a~~aal~~-l~~~~~~~~~~l~~l~~~l~~~l~~~~-~----~~--~~~i~----- 293 (370)
T PRK05937 233 -----LNSPPL-RYSTGLPPHLLISIQVAYDF-LSQEGELARKQLFRLKEYFAQKFSSAA-P----GC--VQPIF----- 293 (370)
T ss_pred -----HhCCCC-eecCCCCHHHHHHHHHHHHH-HHhCcHHHHHHHHHHHHHHHHhcCCCC-C----CC--EEEEE-----
Confidence 111111 1222222222 333222211 111123456677777777777775421 0 00 11123
Q ss_pred CcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec--CHHHHHHHHHHHHHHHHHHhh
Q 047983 160 DKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV--EPSAFEIGLGRMKAFYYRHAK 231 (233)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~--~~~~l~~~~~~l~~~l~~~~~ 231 (233)
++. . ..+.+.+.|.++||.+.. ..+...+++|+++.. ++++++.+++.|.++++++.+
T Consensus 294 ------~~~-----~--~~~~~~~~L~~~gi~v~~-~~~~~~~~iRis~~~~~t~edid~l~~~L~~~~~~~~~ 353 (370)
T PRK05937 294 ------LPG-----I--SEQELYSKLVETGIRVGV-VCFPTGPFLRVNLHAFNTEDEVDILVSVLATYLEKYQK 353 (370)
T ss_pred ------eCC-----h--hHHHHHHHHHHCCeeEEe-eCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHhCC
Confidence 331 1 335667778888998863 223335789999984 899999999999999987643
No 189
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.27 E-value=1.9e-10 Score=102.65 Aligned_cols=195 Identities=12% Similarity=0.079 Sum_probs=103.2
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCcc-ccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHF-VPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|.++|++||+++|.||++..|..+|... .....+.++ +.++||.++ .|+++|++++++ ++++. .
T Consensus 231 ~~l~~lc~~~g~llI~DEv~tg~GrtG~~~a~~~~gv~pD-----i~t~gK~l~-~G~p~gav~~~~--~i~~~---~-- 297 (445)
T PRK08593 231 EALYKFCREHGILFAVDDIQQGLGRTGKWSSISHFNITPD-----LMSFGKSLA-GGMPMSAIVGRK--EIMES---L-- 297 (445)
T ss_pred HHHHHHHHHcCCEEEEechhhCCCcCchHHHHHhcCCCCC-----Eeeeccccc-CCcccEEEEEcH--HHHhh---h--
Confidence 368999999999999999999886655321 111122232 448999965 589999999987 44421 1
Q ss_pred hhhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhc----CCCcccccCCCccEEEEE
Q 047983 80 HSISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKE----IPCITCPKKPEGSMFVMY 155 (233)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~~~~~~g~~~~~ 155 (233)
.......+++.++...+++++.+ +.-.++ +..+..+++-+++.+.|++ .+.+.. .... |.++.+
T Consensus 298 ------~~~~~~~T~~~~pl~~aaa~a~l-~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~v~~-vrG~-Gl~~gi 365 (445)
T PRK08593 298 ------EAPAHLFTTGANPVSCAAALATI-DMIEDE---SLLQRSAEKGEYARKRFDQWVSKYNFVGD-VRGY-GLSIGI 365 (445)
T ss_pred ------ccCCCCCCCCCCHHHHHHHHHHH-HHHHhc---cHHHHHHHHHHHHHHHHHHHHhcCCcEEE-Eecc-ceEEEE
Confidence 11111122222222222333333 211111 2233333333334444433 332221 2333 333331
Q ss_pred ecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec--CHHHHHHHHHHHHHHHHHHhh
Q 047983 156 CGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV--EPSAFEIGLGRMKAFYYRHAK 231 (233)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~--~~~~l~~~~~~l~~~l~~~~~ 231 (233)
-+.+++. ... +.......+...+.++||.+.+.. .+.+|++... ++++++++++.+.+.+++...
T Consensus 366 ~l~~~~~------~~~-~~~~~~~~~~~~~~~~Gv~~~~~~----~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~~~ 432 (445)
T PRK08593 366 DIVSDKK------LKT-RDNEAALKICNYCFEHGVVIIAVA----GNVLRFQPPLVITYEQLDTALNTIEQAFTALEA 432 (445)
T ss_pred EEecCCC------cCC-CcHHHHHHHHHHHHHCCeEEeccC----CCEEEEECCCccCHHHHHHHHHHHHHHHHHHhc
Confidence 1111100 000 000122344555667899997632 2678886664 899999999999999987643
No 190
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.26 E-value=6.5e-11 Score=104.89 Aligned_cols=193 Identities=17% Similarity=0.168 Sum_probs=121.9
Q ss_pred hHHHHHHHcCcEEEEccccCc--ccc-----CCCccccccccCCccCEEEEccCccccCCCCce------EEEEEecCCC
Q 047983 2 CIEETTKKLGIMVIADEVYGH--LVF-----GNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWR------LGWLVTSDPN 68 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~--~~~-----~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R------~G~~~~~~~~ 68 (233)
+|.++|++||++||+|++... ..+ ++....++. +.++.+.|+||.+.++|+| -||++++++
T Consensus 177 ~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~-----ei~~e~~s~sd~~~mS~~K~~~~~~GG~i~~~d~- 250 (431)
T cd00617 177 EVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIA-----EIAREMFSYADGCTMSAKKDGLVNIGGFLALRDD- 250 (431)
T ss_pred HHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHH-----HHHHHhhccCCEEEEEeecCCCCccceEEEeCcH-
Confidence 679999999999999999432 222 121222332 3356678999999999998 568998873
Q ss_pred ccccccchhhhhhhhhHHhhhhhh----hh-ccCcch--HHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCc
Q 047983 69 GILQDLGVAFFHSISLNMRMDDYL----LL-SESVYT--TVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCI 141 (233)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 141 (233)
+++ .+++++. .+ ..+..+ +.++++..+....+ .+.+.++++ +++++.+.|++. ++
T Consensus 251 ~l~--------------~~~~~~~~~~~~~~~~gG~~~r~~~A~A~gL~e~~~--~~~l~~~~~-~r~~l~~~L~~~-G~ 312 (431)
T cd00617 251 ELY--------------EEARQRVVLYEGFVTYGGMAGRDMEALAQGLREAVE--EDYLRHRVE-QVRYLGDRLDEA-GV 312 (431)
T ss_pred HHH--------------HHHHHhccccCCccccccccHHHHHHHHHHHHhccc--HHHHHHHHH-HHHHHHHHHHHC-CC
Confidence 243 3333211 10 111111 22444433322111 233444444 559999999987 66
Q ss_pred ccccCCCccEEEEEecCCCcccccccccccC-CC----CChHHHHHHHHhccCEEEEC-Cccc-C--C---------CCc
Q 047983 142 TCPKKPEGSMFVMYCGSEDKCLLKLNYSLLE-GI----NSDTEFALKLAKEESIIVLP-GITV-G--L---------KDW 203 (233)
Q Consensus 142 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~ll~~~gi~v~p-g~~f-~--~---------~~~ 203 (233)
.+ ..|.||+|+| ++.+.+. ++ -++..++.+++++.||.++. |+.. + + -..
T Consensus 313 ~v-~~P~Ggh~v~-----------~d~~~~~~~~~~~~~~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~~~~~~~~~~~ 380 (431)
T cd00617 313 PI-VEPAGGHAVF-----------IDAREFLPHIPQEQFPAQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYPELEL 380 (431)
T ss_pred Cc-cCCCcceEEE-----------EEhHHhcCCCCcccCcHHHHHHHHHHHcCeeEEeecceecccCCCCCcccCCccce
Confidence 65 6899999999 4433211 11 15889999999999999765 4421 1 0 267
Q ss_pred EEEEeec---CHHHHHHHHHHHHHHHHHHh
Q 047983 204 LRITFAV---EPSAFEIGLGRMKAFYYRHA 230 (233)
Q Consensus 204 ~Rl~~~~---~~~~l~~~~~~l~~~l~~~~ 230 (233)
+|+++.- +.+.++.+.+.|..++++..
T Consensus 381 ~rl~~prr~~t~~~~~~~~~~~~~~~~~~~ 410 (431)
T cd00617 381 VRLAIPRRVYTQDHMDYVAAAVIALYERRE 410 (431)
T ss_pred eEEeccccccCHHHHHHHHHHHHHHHhhHh
Confidence 9999883 88899999999988887653
No 191
>PLN02242 methionine gamma-lyase
Probab=99.25 E-value=2.4e-10 Score=101.25 Aligned_cols=113 Identities=16% Similarity=0.141 Sum_probs=74.5
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceE-EEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRL-GWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~-G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|+++|++||++||+||+|..+.+... .+ ...|++.|+||.++++|+|+ ||+++++ ++++. +
T Consensus 183 ~~I~~la~~~gi~livDea~~~~~~~~~------~~---g~divv~S~SK~l~g~g~~~gG~iv~~~--~li~~---l-- 246 (418)
T PLN02242 183 PELARIAHEKGVTVVVDNTFAPMVLSPA------RL---GADVVVHSISKFISGGADIIAGAVCGPA--ELVNS---M-- 246 (418)
T ss_pred HHHHHHHHHhCCEEEEECCCCccCCCHH------Hc---CCcEEEEeCccccCCCCCceEEEEEcCH--HHHHH---H--
Confidence 4789999999999999999987654221 11 24488999999999999885 8899876 44432 1
Q ss_pred hhhhhHHhhhh--hhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 047983 80 HSISLNMRMDD--YLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIP 139 (233)
Q Consensus 80 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 139 (233)
...+. ....+....++.+++... + ...+..+.+++++|++.+.+.|++.+
T Consensus 247 ------~~~~~~~~~~~g~~~~~~~A~l~~~---~-l~tl~~r~~~~~~~a~~la~~L~~~~ 298 (418)
T PLN02242 247 ------MDLHHGALMLLGPTMNPKVAFELSE---R-LPHLSLRMKEHCRRAMEYAKRMKELG 298 (418)
T ss_pred ------HHHhhhhhhccCCCCCHHHHHHHHc---C-CCcHHHHHHHHHHHHHHHHHHHHhCC
Confidence 22222 112333333432222222 1 12455567789999999999998873
No 192
>PRK06460 hypothetical protein; Provisional
Probab=99.24 E-value=6.9e-10 Score=97.08 Aligned_cols=113 Identities=16% Similarity=0.156 Sum_probs=74.1
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCC-CceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVP-GWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~-G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|+++|+++|+++|+||+|.... . ..++ . .+..+++.|+||.|++. |.|.||+++++ +++
T Consensus 150 ~~I~~la~~~g~~vivDea~~~~~-~---~~~l---~-~~~divv~S~sK~l~G~~~~~~G~~~~~~--~l~-------- 211 (376)
T PRK06460 150 TELSKVCKENGSILIVDATFSTPI-N---QKPL---E-LGADIVVHSASKFLAGHNDVIAGLAAGYG--KLL-------- 211 (376)
T ss_pred HHHHHHHHHcCCEEEEECCcCccc-c---CChh---h-cCCCEEEeecceeccCCCCceEEEEecCH--HHH--------
Confidence 378999999999999999997632 1 1111 1 23458999999988643 47899999876 333
Q ss_pred hhhhhHHhhhhhh-hhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCc
Q 047983 80 HSISLNMRMDDYL-LLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCI 141 (233)
Q Consensus 80 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 141 (233)
.+++... .++.+.++. .+...+ ...++++.+.+++.++++.+.+.|++.|.+
T Consensus 212 ------~~l~~~~~~~g~~~~~~-~a~~~l---~~~~~l~~r~~~~~~n~~~l~~~L~~~p~v 264 (376)
T PRK06460 212 ------NVIDQMRRTLGTSLDPH-AAYLTL---RGIKTLKIRMDVINRNAEQIAEFLEGHPKV 264 (376)
T ss_pred ------HHHHHHHHhcCCCCCHH-HHHHHH---hchhhHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 3333221 223232322 222211 235678888999999999999999876543
No 193
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.24 E-value=2.7e-10 Score=100.31 Aligned_cols=190 Identities=18% Similarity=0.129 Sum_probs=110.9
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHS 81 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~ 81 (233)
++.++|++||+++|+||+...|..+| + +++....+...-+-++||..+. |+.+|.++..+ ++.
T Consensus 247 ~l~~~~~~~gillI~DEVQtG~GRTG-~---~fa~E~~gv~PDivt~aK~ig~-G~Pl~avv~r~--ei~---------- 309 (447)
T COG0160 247 ALRKLCREHGILLIADEVQTGFGRTG-K---MFAFEHFGVEPDIVTLAKSLGG-GLPLSAVVGRA--EIM---------- 309 (447)
T ss_pred HHHHHHHHcCCEEEEeccccCCCccc-c---chhhhhcCCCCCEEEecccccC-CCceeEEeccH--Hhc----------
Confidence 68899999999999999999999888 3 3333333323335589999666 99999999998 332
Q ss_pred hhhHHhhhhhhhhccCcchHH--HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhh----cCCCcccccCCCccEEEEE
Q 047983 82 ISLNMRMDDYLLLSESVYTTV--GAVPQILEKTEEEFFSKITDILREAADICCDRLK----EIPCITCPKKPEGSMFVMY 155 (233)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~----~~~~~~~~~~~~~g~~~~~ 155 (233)
.........+.+.++.+ ++.+.+ +.-.++ .+.+...+.=+++.+.|+ +.+.+.. +... |.++-
T Consensus 310 ----~~~~g~~~~Tf~GNpva~Aaa~AvL-~vie~e---~L~~~a~~~G~~l~~~L~~l~~~~~~Igd-VRG~-Glm~g- 378 (447)
T COG0160 310 ----DWPPGGHGGTFGGNPVACAAALAVL-DVIEEE---NLLERAAELGEYLRDRLEELQEKHPLIGD-VRGL-GLMIG- 378 (447)
T ss_pred ----ccCCcccCCCCCcCHHHHHHHHHHH-HHHHHc---cHHHHHHHHHHHHHHHHHHHHhhcCceec-cccc-ceEEE-
Confidence 21111112223445544 333333 211221 222222222333333332 2433321 2232 55665
Q ss_pred ecCCCccccccccccc--CCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEee--cCHHHHHHHHHHHHHHHHHH
Q 047983 156 CGSEDKCLLKLNYSLL--EGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFA--VEPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 156 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~--~~~~~l~~~~~~l~~~l~~~ 229 (233)
+.+..... .+...-.+.+.+.+.++|+++..+..++ +.+||... .++++++++++.|.+.+.+.
T Consensus 379 --------iE~v~d~~t~~p~~~~~~~i~~~~~~~Glil~~~G~~~--nviRi~PPL~is~e~~d~~l~il~~al~~~ 446 (447)
T COG0160 379 --------VELVKDRDTKEPDAELAAKIVARAFERGLLLLTCGPHG--NVLRILPPLTISDEELDEGLDILEEALKEA 446 (447)
T ss_pred --------EEEecCCCCCCCCHHHHHHHHHHHHHcCCEEeccCCCC--cEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 44432210 0111133555666668899998876555 77888554 49999999999999998764
No 194
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.23 E-value=3.9e-10 Score=100.57 Aligned_cols=189 Identities=17% Similarity=0.179 Sum_probs=104.6
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|.++|++||+++|.||++..|..+|..+ ....++..+.++ ++||.++ .|+++|++++++ ++.+ ..
T Consensus 245 ~~l~~l~~~~g~lli~DEv~tG~gr~G~~~-a~~~~gv~pDiv---t~~K~l~-~G~p~gav~~~~--~i~~---~~--- 311 (441)
T PRK05769 245 KELRKLADKYGILLIDDEVQTGMGRTGKMF-AIEHFGVEPDII---TLAKAIA-GGLPLGAVIGRA--ELMF---LP--- 311 (441)
T ss_pred HHHHHHHHHcCCEEEEechhhCCCccccee-hhhccCCCCCEE---EEccccc-CCcccEEEEEeh--hhhh---cC---
Confidence 368999999999999999999876665321 111222222333 5899977 689999999987 3331 11
Q ss_pred hhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhc----CCCcccccCCCccEEEEEe
Q 047983 81 SISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKE----IPCITCPKKPEGSMFVMYC 156 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~~~~~~g~~~~~~ 156 (233)
.. ....+++.++...+++.+.+ + ..++ ...+.++++-+++.+.|++ .+.+.. .... |.++-
T Consensus 312 -----~~-~~~~T~~g~p~~~aaa~a~L-~-~l~~---~~~~~~~~~g~~l~~~L~~l~~~~~~~~~-vrg~-G~~~~-- 376 (441)
T PRK05769 312 -----PG-SHANTFGGNPVAAAAALATL-E-ELEE---GLLENAQKLGEYLRKELKELKEKYEFIGD-VRGL-GLMIG-- 376 (441)
T ss_pred -----CC-CCCCCCCcCHHHHHHHHHHH-H-HHHH---HHHHHHHHHHHHHHHHHHHHHHhCCCeee-eecc-eEEEE--
Confidence 11 11122332222322333333 1 1111 4445555555555555544 321111 2222 44444
Q ss_pred cCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec--CHHHHHHHHHHHHHHHHH
Q 047983 157 GSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV--EPSAFEIGLGRMKAFYYR 228 (233)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~--~~~~l~~~~~~l~~~l~~ 228 (233)
+.+..+...........+.+.+.++||.+.|.. .+.+|++... ++++++++++++.+.+.+
T Consensus 377 -------i~~~~~~~~~~~~~~~~~~~~~~~~Gil~~~~~----~~~lr~~p~l~~t~~~id~~~~~l~~~l~~ 439 (441)
T PRK05769 377 -------VELVKDRKEPDPKLRDKVLYEAFKRGLLLLGAG----KSAIRIIPPLIITEEEADIGLEILEEAIKE 439 (441)
T ss_pred -------EEeccCCccccHHHHHHHHHHHHhCCcEEecCC----CCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 222111000000122344555667899997632 3678887775 999999999999999875
No 195
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.22 E-value=5.6e-10 Score=99.53 Aligned_cols=194 Identities=9% Similarity=0.050 Sum_probs=114.9
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccc-cccccCCccCEEEEccCcccc-CCCCceEEEEEecCCCccccccchhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFV-PMGVFGSIVPVLTLGSISKRW-IVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~-~~~~~~~~~~~i~~~s~sK~~-~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
+|.++|+++|+++++|++|.--..++.... ...... .--|+++|++|++ |..| |++++++ .+.+ .+
T Consensus 239 ~i~eia~~~gA~L~VD~AH~~Gligg~~~~~~~~~~~--~~D~vtgT~hKaL~GP~G---G~I~~~~--~l~~---~L-- 306 (493)
T PRK13580 239 KLREIADEVGAVLMVDMAHFAGLVAGKVFTGDEDPVP--HADIVTTTTHKTLRGPRG---GLVLAKK--EYAD---AV-- 306 (493)
T ss_pred HHHHHHHHcCCEEEEECchhhceeccccchhhcCCCC--CCcEEEeCChhhccCCCe---EEEEecH--HHHH---HH--
Confidence 789999999999999999997666543211 011111 1228899999976 4344 9999886 3332 11
Q ss_pred hhhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCC
Q 047983 80 HSISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSE 159 (233)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~ 159 (233)
++...+.. +.+.++..++.+..+..-.....++.++.+.+|.+.|.+.|.+. ++...........++
T Consensus 307 ------~~a~P~i~-gg~l~p~iAA~avAl~e~~~~ef~~y~~~l~~Na~~La~~L~~~-G~~vv~ggTdshIV~----- 373 (493)
T PRK13580 307 ------DKGCPLVL-GGPLPHVMAAKAVALAEARTPEFQKYAQQVVDNARALAEGFLKR-GARLVTGGTDNHLVL----- 373 (493)
T ss_pred ------hhCCCccc-CCCccHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHhc-CCCccCCCCCCCEEE-----
Confidence 22222222 22222222222222222122223667899999999999999886 443211112234444
Q ss_pred CcccccccccccCCCCChHHHHHHHHhccCEEEECCcccC-C-----CCcEEEEeec------CHHHHHHHHHHHHHHHH
Q 047983 160 DKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVG-L-----KDWLRITFAV------EPSAFEIGLGRMKAFYY 227 (233)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~-~-----~~~~Rl~~~~------~~~~l~~~~~~l~~~l~ 227 (233)
++++.. + .+...+.+.|.+.||.+.+-..-. + ...+||++.. ++++++++.+.|.++++
T Consensus 374 ------V~lg~~-~--~~g~~a~~~L~e~GI~vn~i~~Ptvp~g~~~~srLRIg~~A~ttrg~teedi~~iad~l~~~l~ 444 (493)
T PRK13580 374 ------IDVTSF-G--LTGRQAESALLDAGIVTNRNSIPSDPNGAWYTSGIRLGTPALTTLGMGSDEMDEVAELIVKVLS 444 (493)
T ss_pred ------EEeCCH-H--HHHHHHHHHHHHCCeEEccccCCCCCCCCCCCceEEeccchhhhcCCCHHHHHHHHHHHHHHHH
Confidence 333211 0 133467778889999997532111 1 4679998775 47899999999988886
Q ss_pred HH
Q 047983 228 RH 229 (233)
Q Consensus 228 ~~ 229 (233)
..
T Consensus 445 ~~ 446 (493)
T PRK13580 445 NT 446 (493)
T ss_pred hh
Confidence 53
No 196
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.22 E-value=1.3e-10 Score=103.88 Aligned_cols=197 Identities=15% Similarity=0.131 Sum_probs=111.7
Q ss_pred ChHHHHHHHcCcEEEE--ccccCccccCCCccccccccCCccCEEEEc---cCccccCCCCceEEEEEecCCCccccccc
Q 047983 1 FCIEETTKKLGIMVIA--DEVYGHLVFGNTHFVPMGVFGSIVPVLTLG---SISKRWIVPGWRLGWLVTSDPNGILQDLG 75 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~--De~y~~~~~~~~~~~~~~~~~~~~~~i~~~---s~sK~~~~~G~R~G~~~~~~~~~~~~~~~ 75 (233)
++|.++|+++|+++|+ |.+..... ... ...+..+++. ++||.|.++|+|+||+++++ ++++.+.
T Consensus 223 ~~I~~~a~~~~~~~iv~~d~~~~g~~------~~~---~~~~~D~~~~s~~k~~~~~~~~Gpg~G~l~~~~--~~~~~~~ 291 (447)
T PRK00451 223 EEIAEIAHAGGALFIVGVDPVSLGLL------KPP---GEYGADIVVGEGQPLGIPLSFGGPYLGFFATRK--KLVRQMP 291 (447)
T ss_pred HHHHHHHHHCCCEEEEEcChHHhccC------CCc---ccCCCCEEEECCCcCCCCCCCCCCCchHHHhhH--HHHhhCC
Confidence 4799999999999998 43321111 011 1122224443 78898889999999999877 4443210
Q ss_pred hh---h-hhhhh-------hH---Hhhh-hhhhhccCcchHHH--HHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 047983 76 VA---F-FHSIS-------LN---MRMD-DYLLLSESVYTTVG--AVPQILEKTEEEFFSKITDILREAADICCDRLKEI 138 (233)
Q Consensus 76 ~~---~-~~~~~-------~~---~~~~-~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 138 (233)
-. . ....+ +. ...+ ...+.+.+.+.... +.+..+....++.+++.++++.++++++.+.|+++
T Consensus 292 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~ 371 (447)
T PRK00451 292 GRLVGETVDADGKRGFVLTLQAREQHIRREKATSNICTNQALNALAAAIYMSLLGPEGLRELAEQNHQKAHYLAERLAEI 371 (447)
T ss_pred CCEeeeecccCCCeeeEeeccccccccccccccccccccHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 00 0 00000 00 0000 00111222222211 11112222234568889999999999999999998
Q ss_pred CCcccccCCCccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEE-EECCcccCC--CCcEEEEee--cCHH
Q 047983 139 PCITCPKKPEGSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESII-VLPGITVGL--KDWLRITFA--VEPS 213 (233)
Q Consensus 139 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~-v~pg~~f~~--~~~~Rl~~~--~~~~ 213 (233)
+++.. . .+++|.+ +.++++. ++.++..+++ ++||. ..+++.|++ .+++|+++. .+++
T Consensus 372 ~g~~~-~--~~~~~~~---------~~v~~~~-----~~~~~~~~L~-~~gi~~~~~~~~~~~~~~~~~rvs~~~~~t~e 433 (447)
T PRK00451 372 GGVEL-F--DGPFFNE---------FVVRLPK-----PAEEVNEALL-EKGILGGYDLGRYYPELGNHLLVCVTEKRTKE 433 (447)
T ss_pred CCEEe-c--CCCeEEE---------EEEecCC-----CHHHHHHHHH-hcCCCCCcccccccCCcCCEEEEecCCCCCHH
Confidence 77654 2 4555544 2233221 2555666655 55555 456666653 578999997 3788
Q ss_pred HHHHHHHHHHHHH
Q 047983 214 AFEIGLGRMKAFY 226 (233)
Q Consensus 214 ~l~~~~~~l~~~l 226 (233)
++++.++.|++++
T Consensus 434 ~i~~l~~~L~~~~ 446 (447)
T PRK00451 434 DIDALVAALGEVL 446 (447)
T ss_pred HHHHHHHHHHHHh
Confidence 8998888887654
No 197
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.22 E-value=1e-10 Score=100.74 Aligned_cols=173 Identities=12% Similarity=0.038 Sum_probs=107.4
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccC-EEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVP-VLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~-~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|+++|+++|+++++|++|+.+.+........ .....+ ..+..|++|. +.++.++|++..+.
T Consensus 168 ~~i~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~--~~~~~~~d~~~~s~~K~-l~~p~g~g~~~~~~------------- 231 (345)
T cd06450 168 EEIADLAEKYDLWLHVDAAYGGFLLPFPEPRHL--DFGIERVDSISVDPHKY-GLVPLGCSAVLVRA------------- 231 (345)
T ss_pred HHHHHHHHHhCCeEEEechhhHHHhhChhhHHH--hcCccccCEEEEchhHh-hCCCcchHHHHHHH-------------
Confidence 478999999999999999999877543211111 111122 2456799996 55666677654320
Q ss_pred hhhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCC
Q 047983 80 HSISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSE 159 (233)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~ 159 (233)
..+..++..+ ....+++.+++..+.++++.+.|++++++..+.+|+++++.|
T Consensus 232 -------------------~~~~~~l~~l----~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~iv~f----- 283 (345)
T cd06450 232 -------------------LKLWATLRRF----GRDGYGEHIDRIVDLAKYLAELIRADPGFELLGEPNLSLVCF----- 283 (345)
T ss_pred -------------------HHHHHHHHHH----hHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceeEEEE-----
Confidence 0000112221 234466777888889999999998887765444567777666
Q ss_pred CcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec---CHHHHHHHHHHHHH
Q 047983 160 DKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV---EPSAFEIGLGRMKA 224 (233)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~---~~~~l~~~~~~l~~ 224 (233)
+++...-.++ +...+.+.|.++|+.+.++..+....++|+++.. +.++++++++.|++
T Consensus 284 -----~~~~~~~~~~--~~~~i~~~L~~~g~~~~~~~~~~~~~~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 284 -----RLKPSVKLDE--LNYDLSDRLNERGGWHVPATTLGGPNVLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred -----EECCcchhhH--HHHHHHHHHHhcCCEEEEeeEECCeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 1221000001 3344555667777777776666556899999984 67888888887764
No 198
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.21 E-value=9.5e-10 Score=96.55 Aligned_cols=192 Identities=13% Similarity=0.028 Sum_probs=107.0
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|.++|+++|+++|+|++|+.- ..+.+...+ +.-+++.|++|.++ ++.|+||+++++ ++++. +.
T Consensus 178 ~~I~~la~~~g~~livD~a~~~g----~~~~~~~~~---g~D~~~~s~~K~l~-~~~~~G~l~~~~--~~i~~--~~--- 242 (387)
T PRK09331 178 KKVAKVAHEYGIPFLLNGAYTVG----RMPVDGKKL---GADFIVGSGHKSMA-ASAPSGVLATTE--EYADK--VF--- 242 (387)
T ss_pred HHHHHHHHHcCCEEEEECCcccC----CcCCCHHHc---CCCEEEeeCccccc-CCCCEEEEEECH--HHHhh--cc---
Confidence 37899999999999999999852 112222222 23388999999976 456999999987 44432 11
Q ss_pred hhhhHHhhhhhh-----hhcc-CcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccC-CCccEE
Q 047983 81 SISLNMRMDDYL-----LLSE-SVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKK-PEGSMF 152 (233)
Q Consensus 81 ~~~~~~~~~~~~-----~~~~-~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~~~g~~ 152 (233)
.....+. .++. ...+.. .+++++ ....+... ..+...++.+++.+.|++++++..+.. +....+
T Consensus 243 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~aal--~~~~~~~~-~~~~~~~~~~~l~~~L~~l~g~~~~~~~~~~~~i 314 (387)
T PRK09331 243 -----RTSRKFGVKEVELLGCTLRGAPLVTLMASF--PHVVERVK-RWDEEVKKARWFVDELEKIEGFKQLGEKPRNHDL 314 (387)
T ss_pred -----cccCCCcccceeeeceecCchHHHHHHHHH--HHHHHHHH-HHHHHHHHHHHHHHHHhcCCCEEEeccCcCcCCe
Confidence 1000000 0111 111111 223332 11122222 344556777788999998866654221 222333
Q ss_pred EEEecCCCccccccccccc----CCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEe-ecCHHHHHHHHHHHHHHHH
Q 047983 153 VMYCGSEDKCLLKLNYSLL----EGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITF-AVEPSAFEIGLGRMKAFYY 227 (233)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~-~~~~~~l~~~~~~l~~~l~ 227 (233)
.. +..+ .. .+...+...+.+.|+++||...+.. ....+|+.. +.+.++++.+++.|+++++
T Consensus 315 ~~---------~~~~--~~~~~~~~~~~~~~~~~~~L~~~gI~~~~~~---~~~i~ri~~~g~t~~di~~l~~aL~~i~~ 380 (387)
T PRK09331 315 MK---------FETP--SFDEIAKKHKRRGFFLYEELKKRGIHGIKPG---ATKEFKLSTYGLTWEQVEYVADAFKEIAE 380 (387)
T ss_pred EE---------EeCC--chhHHhhhccccchhHHHHHHHcCceEEccC---CceEEEEEeccCCHHHHHHHHHHHHHHHH
Confidence 33 2222 10 0000122345556678899854321 235567766 4489999999999998877
Q ss_pred HH
Q 047983 228 RH 229 (233)
Q Consensus 228 ~~ 229 (233)
+.
T Consensus 381 ~~ 382 (387)
T PRK09331 381 KY 382 (387)
T ss_pred hc
Confidence 64
No 199
>PRK07049 methionine gamma-lyase; Validated
Probab=99.21 E-value=6.1e-10 Score=98.93 Aligned_cols=112 Identities=12% Similarity=0.108 Sum_probs=70.3
Q ss_pred hHHHHHHH------cCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccC-CCCceEEEEEecCCCcccccc
Q 047983 2 CIEETTKK------LGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWI-VPGWRLGWLVTSDPNGILQDL 74 (233)
Q Consensus 2 ~i~~l~~~------~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~R~G~~~~~~~~~~~~~~ 74 (233)
+|.++|+. +++++|+||+|....... ++ .....|++.|+||.++ .+|+|+||+++++ +++
T Consensus 195 ~l~~la~~~~~~~~~~~~vvvDety~~~~~~~----pl----~~g~divv~S~SK~~gG~~glr~G~vv~~~--~l~--- 261 (427)
T PRK07049 195 AVRRVADAIEARQGHRPIIACDNTLLGPVFQK----PL----EHGADLSVYSLTKYVGGHSDLVAGAVLGRK--ALI--- 261 (427)
T ss_pred HHHHHHHHhhhcccCCCEEEEECCccccccCC----cc----ccCCCEEEEcCceeecCCCCcEEEEEECCH--HHH---
Confidence 56677766 899999999987643221 22 1134588889999998 5999999999876 343
Q ss_pred chhhhhhhhhHHhhhhhhh-hccCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 047983 75 GVAFFHSISLNMRMDDYLL-LSESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCIT 142 (233)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 142 (233)
..+..... ++...++.. .++...+ +.+....+...++++.+.+.|++.|.+.
T Consensus 262 -----------~~l~~~~~~~g~~ls~~~a~l~~r~L-----~tl~~R~~~~~~~a~~la~~L~~~p~V~ 315 (427)
T PRK07049 262 -----------RQVRALRSAIGTQLDPHSCWMLGRSL-----ETLVLRMERANRNARAVAEFLRDHPKVE 315 (427)
T ss_pred -----------HHHHHHHHhcCCCCCHHHHHHHHcCC-----ChHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 23322212 222223322 2222222 2345555666999999999998876543
No 200
>PRK06541 hypothetical protein; Provisional
Probab=99.18 E-value=1.2e-09 Score=97.95 Aligned_cols=202 Identities=12% Similarity=0.097 Sum_probs=109.6
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCc-eEEEEEecCCCccccccchhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGW-RLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~-R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
+|.++|++||+++|.||++..|...|... .....+-.+.+ -++||.++ .|+ ++|++++++ ++++. +.
T Consensus 246 ~l~~lc~~~g~llI~DEV~tGfGR~G~~~-a~~~~gv~PDi---vt~gK~l~-~G~~pigav~~~~--~i~~~--~~--- 313 (460)
T PRK06541 246 RVREICDRYDVLLVSDEVICAFGRLGEMF-GCERFGYVPDI---ITCAKGIT-SGYSPLGAMIASD--RLFEP--FL--- 313 (460)
T ss_pred HHHHHHHHcCCEEEEechhhCCCcCchhh-hhhhcCCCCCE---EEeccccc-CCccceeEEEEcH--HHHHH--hh---
Confidence 68999999999999999999885444321 11112211223 36899976 687 999999987 34321 11
Q ss_pred hhhhHHhhhhh-hhhccCcchHH--HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCccc--ccCCCccEEEEE
Q 047983 81 SISLNMRMDDY-LLLSESVYTTV--GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITC--PKKPEGSMFVMY 155 (233)
Q Consensus 81 ~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~--~~~~~~g~~~~~ 155 (233)
.....+ ...+.+.++.. ++++.+ +. .. -....+.++++.+++.+.|+++..... .....|.++...
T Consensus 314 -----~~~~~~~~~~T~~gnp~~~aaala~l-~~-l~--~~~~~~~~~~~g~~l~~~L~~l~~~~~v~~vrg~Gl~~~ie 384 (460)
T PRK06541 314 -----DGPTMFLHGYTFGGHPVSAAVALANL-DI-FE--REGLLDHVRDNEPAFRATLEKLLDLPIVGDVRGDGYFYGIE 384 (460)
T ss_pred -----cCCCccccCCCCCCCHHHHHHHHHHH-HH-HH--hccHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecceEEEEE
Confidence 000111 11122333332 333332 11 11 123456667777777777766422211 133555555441
Q ss_pred ecCCCcccccccccccCCCCC--hHHHHHHHHhccCEEEECCcccCCCCcEEEEee--cCHHHHHHHHHHHHHHHHHHh
Q 047983 156 CGSEDKCLLKLNYSLLEGINS--DTEFALKLAKEESIIVLPGITVGLKDWLRITFA--VEPSAFEIGLGRMKAFYYRHA 230 (233)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~--~~~~~l~~~~~~l~~~l~~~~ 230 (233)
+..|+.+ +-++.. ...+ ....+...+.++||.+.|.. . ..+.+|++.. .+++++++++++|.+.+++..
T Consensus 385 -~~~~~~~-~~~~~~--~~~~~~~~~~~~~~l~~~Gi~~~~~~-~-g~~~lrl~Ppl~~t~~~id~~~~~l~~~l~~~~ 457 (460)
T PRK06541 385 -LVKDKAT-KETFTD--DESERLLRGFLSPALFEAGLYCRADD-R-GDPVVQLAPPLISGQEEFDEIEQILRSVLTEAW 457 (460)
T ss_pred -EecCccc-ccCCcc--hhhhhhHHHHHHHHHHhCCeEEEecC-C-CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 1111000 000000 0000 11234455667899998731 1 1368999888 599999999999999998754
No 201
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.18 E-value=1.6e-09 Score=94.27 Aligned_cols=187 Identities=18% Similarity=0.117 Sum_probs=108.1
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCC----CccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccch
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGN----THFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGV 76 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~----~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~ 76 (233)
++|.++|+++|+++|+|++|..+..+- .....+. +....--.+..|..| |+.++.|+|+++..++ ++++.+..
T Consensus 173 ~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d-~~~~~~d~~~~s~~K-~~~~~~~~G~~~~~~~-~~~~~l~~ 249 (373)
T TIGR03812 173 EELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFD-FSLPGVQSITIDPHK-MGLSPIPAGGILFRSK-SYLKYLSV 249 (373)
T ss_pred HHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCcc-ccCCCCCEEEECccc-cCCCcCCceEEEEeCH-HHHhhhcc
Confidence 478999999999999999998764310 0000110 000011133456679 6888889997775442 33321100
Q ss_pred hhhhhhhhHHhhhhhhhhc------cCcchH-HHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCc
Q 047983 77 AFFHSISLNMRMDDYLLLS------ESVYTT-VGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEG 149 (233)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~------~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~ 149 (233)
. ..+.... ...+.. ..++...++...++.+++..+++.++++++.+.|++++.... ..|..
T Consensus 250 ~-----------~~~~~~~~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~-~~~~~ 317 (373)
T TIGR03812 250 D-----------APYLTVKKQATITGTRSGASAAATYAVIKYLGREGYRKIVAECMENTRYLVEELKKIGFEPV-IEPVL 317 (373)
T ss_pred c-----------CcccCCCCCcceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEE-cCCCc
Confidence 0 0110000 011111 133333333223456678889999999999999998753322 34433
Q ss_pred cEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec--CHHHHHHHHHHHHH
Q 047983 150 SMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV--EPSAFEIGLGRMKA 224 (233)
Q Consensus 150 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~--~~~~l~~~~~~l~~ 224 (233)
.++. ++++ +...+.+.|.++||.+.++. ..+++|+++.. ++++++..++.|++
T Consensus 318 -~~v~---------~~~~---------~~~~v~~~L~~~gi~v~~~~---~~~~iRis~~~~~t~edid~l~~~L~~ 372 (373)
T TIGR03812 318 -NIVA---------FEVD---------DPEEVRKKLRDRGWYVSVTR---CPKALRIVVMPHVTREHIEEFLEDLKE 372 (373)
T ss_pred -eEEE---------EEeC---------CHHHHHHHHHHCCceeccCC---CCCEEEEEEECCCCHHHHHHHHHHHhh
Confidence 3444 3332 22345566677899998753 35799999984 78888988888864
No 202
>PRK07678 aminotransferase; Validated
Probab=99.17 E-value=9e-10 Score=98.54 Aligned_cols=207 Identities=14% Similarity=0.095 Sum_probs=105.1
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCcc-ccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHF-VPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++.++|++||+++|.||+...|..+|.-. .....+.++ +-+++|.++...+++|.+++++ ++.+. +.
T Consensus 238 ~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~gv~PD-----ivt~gK~lggG~~Pi~av~~~~--~i~~~--~~--- 305 (451)
T PRK07678 238 AVKEICQKHGALLISDEVICGFGRTGKAFGFMNYGVKPD-----IITMAKGITSAYLPLSATAVKK--EIYEA--FK--- 305 (451)
T ss_pred HHHHHHHHcCCEEEEeehhhcCCcCchhHHHHhcCCCCC-----EEEeecccccCCcceeEEEEcH--HHHHH--Hh---
Confidence 68999999999999999999986665311 111223332 4478998655337999999987 34321 11
Q ss_pred hhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHH-HHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCC
Q 047983 81 SISLNMRMDDYLLLSESVYTTVGAVPQILEKTEE-EFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSE 159 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~ 159 (233)
.......+.+..+++.++...+++++.+ +.-.+ +..++.++.-..-++.+.+.+++.+.+.. ....|.++.. -+.+
T Consensus 306 ~~~~~~~~~h~~T~~gnp~~~aaa~a~l-~~l~~~~~~~~~~~~g~~l~~~l~~~~~~~~~v~~-vrg~Gl~~~i-~~~~ 382 (451)
T PRK07678 306 GKGEYEHFRHVNTFGGNPAACALALKNL-EIMENENLIERSAQLGELLLEQLKEELGEHPLVGD-IRGKGLLVGI-ELVN 382 (451)
T ss_pred ccCcccccccCCCCCcCHHHHHHHHHHH-HHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCEEE-EEeeceEEEE-EEec
Confidence 0000000112223333333332444443 11111 22222222222223333333334433221 3343443332 1111
Q ss_pred CcccccccccccCCCCChHHHHHHHHhccCEEEECCccc--CCCCcEEEEeec--CHHHHHHHHHHHHHHHHHH
Q 047983 160 DKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITV--GLKDWLRITFAV--EPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f--~~~~~~Rl~~~~--~~~~l~~~~~~l~~~l~~~ 229 (233)
|.. ...+........+...+.++||.+.+.... +..+.+|++... ++++++++++.+.+.+++.
T Consensus 383 ~~~------~~~~~~~~~a~~i~~~l~~~Gv~~~~~g~~v~~~~~~lrl~Ppl~it~~eid~~~~~l~~~l~~~ 450 (451)
T PRK07678 383 DKE------TKEPADNDKVASVVAACKEKGLIIGKNGDTVAGYNNVLTLSPPLVISSEEIAFIVGTLKTALERI 450 (451)
T ss_pred CCc------ccCcCchHHHHHHHHHHHHCCcEEeecCccccCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHhc
Confidence 100 000000012344555666889999764321 124678998664 8999999999999998764
No 203
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.16 E-value=1.4e-09 Score=93.71 Aligned_cols=188 Identities=14% Similarity=0.146 Sum_probs=111.3
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHS 81 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~ 81 (233)
++.++|++||+++|.||+...+..+|. +.+...++..--|-++.|.+| .|+++|.+++.. .+.+ ..
T Consensus 209 ~lr~lCd~~g~LLI~DEVQtG~GRTGk----~fA~e~~gV~PDI~tlaK~Lg-GG~PigA~la~~--~~~~---~~---- 274 (404)
T COG4992 209 ALRELCDEHGALLILDEVQTGLGRTGK----LFAYEHYGVEPDILTLAKALG-GGFPIGAMLATE--EIAS---AF---- 274 (404)
T ss_pred HHHHHHHHhCeEEEEeccccCCCccch----HHHHHHhCCCCCEEEeecccc-CCccceeeEEch--hhhh---cC----
Confidence 578999999999999999999988874 333322222233668999954 579999999974 2221 11
Q ss_pred hhhHHhhhhhhhhccCcchHH--HHHHHHhhhc-HHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecC
Q 047983 82 ISLNMRMDDYLLLSESVYTTV--GAVPQILEKT-EEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGS 158 (233)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~ 158 (233)
..-.+-. +.+.++.+ ++.+. ++.- .++.+++.++.=..-++.|.+..++.+.+.. +... |..+-
T Consensus 275 ----~~G~HgS--TfGGNpLacAv~~a~-l~~l~~e~ll~~v~~~g~~~~~~L~~l~~~~~~v~~-vRG~-GLmiG---- 341 (404)
T COG4992 275 ----TPGDHGS--TFGGNPLACAVALAV-LEVLLEEGLLENVREKGEYLLQRLRELKRRYPLVKE-VRGR-GLMIG---- 341 (404)
T ss_pred ----CCCcccC--CCCcCHHHHHHHHHH-HHHHcchhHHHHHHHHHHHHHHHHHHHhhcCCceee-eecc-eeEEE----
Confidence 1222222 33455555 33333 2222 2334444333333333333333333432221 2232 55555
Q ss_pred CCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEee--cCHHHHHHHHHHHHHHHHHHhh
Q 047983 159 EDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFA--VEPSAFEIGLGRMKAFYYRHAK 231 (233)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~--~~~~~l~~~~~~l~~~l~~~~~ 231 (233)
+.+..+. ....+.+.+.++||++.+.. .+.+|+.-. .+++++++++++|.+++.....
T Consensus 342 -----iel~~~~------~a~~~~~~~~~~gvL~~~a~----~~ViR~~PpL~i~~eei~~~~~~l~~~l~~~~~ 401 (404)
T COG4992 342 -----IELKEPY------RARDIVRALREEGVLVLPAG----PNVIRFLPPLVITEEEIDEALDALERALAAASA 401 (404)
T ss_pred -----EEecCcc------cHHHHHHHHHHCCeEEecCC----CCeEEecCCccCCHHHHHHHHHHHHHHHHHhhh
Confidence 4443211 24555666778899998854 478999555 4999999999999999987653
No 204
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.16 E-value=3.7e-09 Score=93.24 Aligned_cols=203 Identities=11% Similarity=0.011 Sum_probs=120.3
Q ss_pred ChHHHH--HHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhh
Q 047983 1 FCIEET--TKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAF 78 (233)
Q Consensus 1 ~~i~~l--~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~ 78 (233)
++|.++ |+++|+++|+|++++- +..+..+..+ +.-+++.|.+|.+++|. ++||+++++ ..++++ ..
T Consensus 157 ~~i~~l~~~~~~g~~~vvD~v~s~----g~~~id~~~~---~~D~~~~s~~K~l~~P~-G~G~l~~~~--~~~~~~--~~ 224 (401)
T PLN02409 157 AGVRKLLDCAQHPALLLVDGVSSI----GALDFRMDEW---GVDVALTGSQKALSLPT-GLGIVCASP--KALEAS--KT 224 (401)
T ss_pred HHHHHHHhhhccCcEEEEEccccc----CCcccccccc---CccEEEEcCccccCcCC-CcceeEECH--HHHHHH--hc
Confidence 367888 9999999999999874 2222222222 22366777799876643 699999987 344321 10
Q ss_pred hhhh----hhHHh--hhhhhhh-ccCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCC--
Q 047983 79 FHSI----SLNMR--MDDYLLL-SESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPE-- 148 (233)
Q Consensus 79 ~~~~----~~~~~--~~~~~~~-~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-- 148 (233)
.+.. +.... ....... ...++... .++...++.-.+.-.+++++++++.++++.+.|+++ ++..+.+..
T Consensus 225 ~~~~~~~~~~~~~~~~~~~g~~~~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~-g~~~~~~~~~~ 303 (401)
T PLN02409 225 AKSPRVFFDWADYLKFYKLGTYWPYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAW-GLKLCTKKPEW 303 (401)
T ss_pred CCCCCeecCHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCeeccCChhh
Confidence 0000 00000 0000001 11122222 344433332233457788899999999999999877 444322211
Q ss_pred -ccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec--CHHHHHHHHHHHHHH
Q 047983 149 -GSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV--EPSAFEIGLGRMKAF 225 (233)
Q Consensus 149 -~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~--~~~~l~~~~~~l~~~ 225 (233)
++...| +.++. +. +..+....+++++||.+.+|.+-.....+||+.-. +.+++...++.|.++
T Consensus 304 ~s~~v~~---------~~~p~----~~-~~~~l~~~l~~~~~i~i~~G~~~~~~~~~Rig~~g~~~~~~~~~~~~~~~~~ 369 (401)
T PLN02409 304 RSDTVTA---------VVVPE----GI-DSAEIVKNAWKKYNLSLGLGLNKVAGKVFRIGHLGNVNELQLLGALAGVEMV 369 (401)
T ss_pred cccceEE---------EeCCC----CC-CHHHHHHHHHHhCCEEEEcCCCcccCCEEEEcCCCCCCHHHHHHHHHHHHHH
Confidence 223345 33332 22 34566667778899999987653236789998775 889999999999998
Q ss_pred HHHHh
Q 047983 226 YYRHA 230 (233)
Q Consensus 226 l~~~~ 230 (233)
+.+..
T Consensus 370 l~~~g 374 (401)
T PLN02409 370 LKDVG 374 (401)
T ss_pred HHHcC
Confidence 87653
No 205
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.14 E-value=6.3e-10 Score=96.92 Aligned_cols=187 Identities=10% Similarity=0.063 Sum_probs=104.2
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|.++|++||+++|+|++|+.-. ..+..++. -+++.|.+|.+ +|+|.||+++++ ++++.+...
T Consensus 169 ~~i~~~a~~~gi~vivD~a~~~~~------~~~~~~g~---D~~~~S~~K~l--~gp~~G~l~~~~--~~i~~~~~~--- 232 (363)
T TIGR01437 169 EDAAQVAQEHNLPLIVDAAAEEDL------QKYYRLGA---DLVIYSGAKAI--EGPTSGLVLGKK--KYIEWVKLQ--- 232 (363)
T ss_pred HHHHHHHHHcCCeEEEECCCCCch------HHHHHcCC---CEEEEeCCccc--CCCceEEEEEcH--HHHHHHHhc---
Confidence 479999999999999999997211 11112222 26778999964 578899999866 344321000
Q ss_pred hhhhHHhhhhhhhhccCcchHH---HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCc-cEEEEEe
Q 047983 81 SISLNMRMDDYLLLSESVYTTV---GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEG-SMFVMYC 156 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~-g~~~~~~ 156 (233)
.. .... .+..+..+.+ +++..+. ++..+..+.+.++++.+.+.|++++++.....+.. +. .+
T Consensus 233 ~~----~~~~--~~~~~~~~~~gl~aAl~~~~-----~~~~~~~~~~~~~~~~l~~~L~~i~g~~~~~~~~~~~~-~~-- 298 (363)
T TIGR01437 233 SK----GIGR--AMKVGKENILGLTAALEQYL-----STGKESGAEMVAKLTPFIEALNTLKGVSASIVQDEAGR-DI-- 298 (363)
T ss_pred cC----CCcc--eeccCHHHHHHHHHHHHHHH-----ccCcccHHHHHHHHHHHHHHHhcCCCeEEEEecCCCCC-cC--
Confidence 00 0000 0011111111 2222221 12223344455677789999998888765322211 11 11
Q ss_pred cCCCcccccccccccCCCCChHHHHHHHHhccC--EEEECCcccCCCCcEEEEeec-CHHHHHHHHHHHHHH
Q 047983 157 GSEDKCLLKLNYSLLEGINSDTEFALKLAKEES--IIVLPGITVGLKDWLRITFAV-EPSAFEIGLGRMKAF 225 (233)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~g--i~v~pg~~f~~~~~~Rl~~~~-~~~~l~~~~~~l~~~ 225 (233)
+...+.++... .++ +...+.+.|++++ |.+++ .|...+.+|+++.+ ++++++.+.++|.++
T Consensus 299 ---~~~~v~~~~~~-~g~--~~~~l~~~L~~~~~~I~~r~--~~~~~~~~~l~~~~~~~~e~~~~~~~l~~~ 362 (363)
T TIGR01437 299 ---ARAEIRFDESE-LGM--TAADVVQALRQGEPAIYTRG--YKANEGIIEIDPRSVTGGQLDIIVERIREI 362 (363)
T ss_pred ---ceEEEEEeccC-CCC--CHHHHHHHHhcCCCCEEEee--eeecCCeEEEEeecCCHHHHHHHHHHHHHh
Confidence 00002233211 122 4455556667667 66655 56667899999887 788899998888765
No 206
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.13 E-value=6.5e-09 Score=92.17 Aligned_cols=187 Identities=14% Similarity=0.094 Sum_probs=108.3
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCc-cccccccCCccCEEEEccCccccC-CCCceEEEEEecCCCccccccchhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTH-FVPMGVFGSIVPVLTLGSISKRWI-VPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~-~~~~~~~~~~~~~i~~~s~sK~~~-~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
+|.++|++||+++|+|++++...+.... ..++ . .--++++|++|.++ ..| |+++++++ .+ .
T Consensus 187 ~l~~la~~~g~~livD~Aha~G~~~~g~~~~~~---~--~~Di~~~s~~K~l~g~~G---G~v~~~~~--~~-----~-- 249 (416)
T PRK13034 187 RFREIADEVGALLMVDMAHIAGLVAAGEHPNPF---P--HAHVVTTTTHKTLRGPRG---GMILTNDE--EI-----A-- 249 (416)
T ss_pred HHHHHHHHcCCEEEEeCcccccCcccCCCCCCC---C--CceEEEEeCcccCCCCCC---eEEEECcH--HH-----H--
Confidence 6889999999999999998865443221 1111 1 23388999999884 345 87777652 22 1
Q ss_pred hhhhhHHhhhhhhhh--ccCcchHH-HH-HHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccC-CCccEEEE
Q 047983 80 HSISLNMRMDDYLLL--SESVYTTV-GA-VPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKK-PEGSMFVM 154 (233)
Q Consensus 80 ~~~~~~~~~~~~~~~--~~~~~~~~-~~-~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~~~g~~~~ 154 (233)
.+++..... ..+..+.. ++ ..++++. ......+.++.+.++.+++.+.|++. ++....+ ++ .....
T Consensus 250 ------~~~~~~~~~~~~~~~~~~~~aa~~~al~~~-~~~~~~~~~~~l~~~a~~l~~~L~~~-G~~~~~~~~~-t~i~~ 320 (416)
T PRK13034 250 ------KKINSAVFPGLQGGPLMHVIAAKAVAFGEA-LQPEFKTYAKQVIANAQALAEVLKER-GYDLVSGGTD-NHLLL 320 (416)
T ss_pred ------HHHHhhcCCcccCCccHHHHHHHHHHHHHH-hChhHHHHHHHHHHHHHHHHHHHHHc-CCEeccCCCC-CcEEE
Confidence 222222121 11122222 22 2222211 11223466789999999999999887 5543111 22 33333
Q ss_pred EecCCCcccccccccccCCCCChHHHHHHHHhccCEEEEC----Cc-ccC-CCCcEEEEeec------CHHHHHHHHHHH
Q 047983 155 YCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLP----GI-TVG-LKDWLRITFAV------EPSAFEIGLGRM 222 (233)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~p----g~-~f~-~~~~~Rl~~~~------~~~~l~~~~~~l 222 (233)
+.+.... .+.....+.|+++||.+.+ +. .+. .+..+|+++.. ++++++++.+.|
T Consensus 321 ---------v~~~~~~-----~~~~~~~~~L~~~GI~v~~~~~p~~~~~p~~~~~lR~~~~~~t~~~~~~~di~~l~~~l 386 (416)
T PRK13034 321 ---------VDLRPKG-----LSGKDAEQALERAGITVNKNTVPGDTESPFVTSGIRIGTPAGTTRGFGEAEFREIANWI 386 (416)
T ss_pred ---------EEcCCCC-----CCHHHHHHHHHhCCcEEeccCCCCCCcCCCCCCeeEeCcHHHHhCCCCHHHHHHHHHHH
Confidence 2232211 1556666778888999974 10 111 14679998653 578999999999
Q ss_pred HHHHHH
Q 047983 223 KAFYYR 228 (233)
Q Consensus 223 ~~~l~~ 228 (233)
.+++.+
T Consensus 387 ~~~~~~ 392 (416)
T PRK13034 387 LDVLDD 392 (416)
T ss_pred HHHHhc
Confidence 887763
No 207
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.11 E-value=3.1e-09 Score=96.14 Aligned_cols=199 Identities=16% Similarity=0.068 Sum_probs=103.6
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCcc-ccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHF-VPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|.++|++||+++|.||++..|...|... .....+.++ +.+++|.++...+++|.+++++ ++.+. +. .
T Consensus 284 ~~lr~lc~~~g~lLI~DEV~TGfGRtG~~~a~e~~gv~PD-----ivtlgK~lggG~~PigAv~~~~--~i~d~--~~-~ 353 (504)
T PLN02760 284 EKIQAVLKKYDILFIADEVICAFGRLGTMFGCDKYNIKPD-----LVSLAKALSSAYMPIGAVLVSP--EISDV--IH-S 353 (504)
T ss_pred HHHHHHHHHcCCEEEecchhhCCcccchhhHHHhcCCCCc-----EEEecccccCCccccceEeecH--HHHhh--hh-c
Confidence 368999999999999999999986666421 111122232 6788998654235899999987 44421 11 0
Q ss_pred hhhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhc---CCCcccccCCCccEEEEEe
Q 047983 80 HSISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKE---IPCITCPKKPEGSMFVMYC 156 (233)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~---~~~~~~~~~~~~g~~~~~~ 156 (233)
.. .....+....+++.++...+++++.+ +.-.+ +...+..+++-+++.+.|++ .+.+.. ....|. ++-
T Consensus 354 ~~-~~~~~~~h~~T~~gnPl~~Aaala~L-e~i~~---~~l~~~~~~~g~~l~~~L~~l~~~~~v~~-vrG~Gl-~~g-- 424 (504)
T PLN02760 354 QS-NKLGSFAHGFTYSGHPVSCAVALEAL-KIYKE---RNIPEHVNKIAPRFQDGIKAFSGSPIIGE-IRGTGL-ILG-- 424 (504)
T ss_pred cc-ccccCcccCCCCCCCHHHHHHHHHHH-HHHHh---CCHHHHHHHHHHHHHHHHHHHhcCCCeee-EEeCce-EEE--
Confidence 00 00000111223333333322444433 11111 12233334444444444433 322211 233333 333
Q ss_pred cCCCccccccccccc--CCCCC---hHHHHHHHHhccCEEEECCcccCCCCcEEEEee--cCHHHHHHHHHHHHHHHHHH
Q 047983 157 GSEDKCLLKLNYSLL--EGINS---DTEFALKLAKEESIIVLPGITVGLKDWLRITFA--VEPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 157 ~~~~~~~~~~~~~~~--~~~~~---~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~--~~~~~l~~~~~~l~~~l~~~ 229 (233)
+.+..... ....+ -...+...+.++||.+.+.. +.+|++.. .++++++++++++.+++++.
T Consensus 425 -------ie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g-----~~lrl~Ppl~it~eeid~~~~~l~~al~~~ 492 (504)
T PLN02760 425 -------TEFVDNKSPNDPFPAEWGVGAYFGAECKKRGMLVRVAG-----DNIMMSPPLIITPEEVDELISIYGKALKAT 492 (504)
T ss_pred -------EEEecCCcccccccchhHHHHHHHHHHHhCCcEEEecC-----CEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 22211100 00000 13344555668899998732 46888855 69999999999999998876
Q ss_pred h
Q 047983 230 A 230 (233)
Q Consensus 230 ~ 230 (233)
.
T Consensus 493 ~ 493 (504)
T PLN02760 493 E 493 (504)
T ss_pred H
Confidence 3
No 208
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.11 E-value=3.4e-09 Score=93.30 Aligned_cols=183 Identities=15% Similarity=0.117 Sum_probs=102.6
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCcc-ccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHF-VPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|.++|++||+++|.||+++.|..+|... .....+.++ +.++||.++. |+.+|.+++++ ++. .+.
T Consensus 203 ~~l~~l~~~~~~llI~DEv~tG~GRtG~~~a~~~~gv~PD-----i~t~gK~lg~-G~p~~av~~~~--~i~---~~~-- 269 (395)
T PRK03715 203 QQLRALTKQHGLLLIVDEVQTGCGRTGTLFAYELSGIEPD-----IMTLGKGIGG-GVPLAALLAKA--EVA---VFE-- 269 (395)
T ss_pred HHHHHHHHHcCCEEEEeccccCCCCCcchhhHhhcCCCCc-----eeeehhhhhC-CcceEEEEEcc--ccc---ccc--
Confidence 368999999999999999999876555421 112222332 4688999764 79999999987 332 111
Q ss_pred hhhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCC---CcccccCCCccEEEEEe
Q 047983 80 HSISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIP---CITCPKKPEGSMFVMYC 156 (233)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~---~~~~~~~~~~g~~~~~~ 156 (233)
.. ....+++.++...+++++.+ +. .++ .+..+.++++-+++.+.|+++. ++.. .... |..+-
T Consensus 270 ------~~-~~~~T~~g~pl~~aaala~L-~~-l~~--~~l~~~~~~~g~~l~~~L~~l~~~~~i~~-vrG~-Glm~~-- 334 (395)
T PRK03715 270 ------AG-DQGGTYNGNPLMTAVGVAVI-SQ-LLA--PGFLEGVRARGEYLKEKLLELSEERGLEG-ERGE-GLLRA-- 334 (395)
T ss_pred ------CC-CcCCCCCCCHHHHHHHHHHH-HH-HHh--ccHHHHHHHHHHHHHHHHHHHhhcCCcCe-EEcc-eeEEE--
Confidence 10 11122332222222333333 11 111 2344555555555555555421 2221 2233 33333
Q ss_pred cCCCcccccccccccCCCCChHHHHHHHHhcc---CEEEECCcccCCCCcEEEEeec--CHHHHHHHHHHHHHHHHHH
Q 047983 157 GSEDKCLLKLNYSLLEGINSDTEFALKLAKEE---SIIVLPGITVGLKDWLRITFAV--EPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~---gi~v~pg~~f~~~~~~Rl~~~~--~~~~l~~~~~~l~~~l~~~ 229 (233)
+.+.. +....+...+.+. ||.+.+.. .+.+|++... ++++++++++.|.+.++++
T Consensus 335 -------i~l~~-------~~~~~~~~~~~~~~~~Gi~~~~~~----~~~lR~~p~l~~t~~ei~~~~~~l~~~l~~~ 394 (395)
T PRK03715 335 -------LLLGK-------DIGPQIVEKARDMQPDGLLLNAPR----PNLLRFMPALNVTTEEIDQMIAMLRSVLDKL 394 (395)
T ss_pred -------EEecC-------chHHHHHHHHHhccCCCEEEeecC----CCEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 33321 1223333444444 99987532 2678997774 8999999999999998764
No 209
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.10 E-value=3e-10 Score=98.01 Aligned_cols=192 Identities=13% Similarity=0.080 Sum_probs=119.4
Q ss_pred ChHHHHHHHcCcEEEEccccCccccC--CCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFG--NTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAF 78 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~ 78 (233)
++++++++++..+++.||+++.-..+ |...-.+...++.+..|.+++|+|+|+.+| ||+++++ .+++ ..
T Consensus 296 p~vvalkkkykayl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSfga~G---Gyiagsk--~lid---~l- 366 (519)
T KOG1357|consen 296 PEVVALKKKYKAYLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSFGAAG---GYIAGSK--ELID---YL- 366 (519)
T ss_pred HHHHHhhccccEEEEeeccccccccCCCCcceeeccCCCchhheeecceehhhccccc---ceecCcH--HHHh---hh-
Confidence 37899999999999999999976654 333445556677778899999999999999 9999998 4442 11
Q ss_pred hhhhhhHHhhhhhhhh-ccCcchHH----HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEE
Q 047983 79 FHSISLNMRMDDYLLL-SESVYTTV----GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFV 153 (233)
Q Consensus 79 ~~~~~~~~~~~~~~~~-~~~~~~~~----~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~ 153 (233)
.....+... +..+++.+ .++..+......+..++..+++.+|..+++..|... ++.++ ..+....+
T Consensus 367 -------rt~s~~~~yat~~sppvaqq~~ssl~~i~G~dgt~~g~~k~~~l~~ns~yfr~~l~~~-gfivy-G~~dSpVv 437 (519)
T KOG1357|consen 367 -------RTPSPSALYATSLSPPVAQQILTSVKHIMGEDGTNRGRQKIERLAENSRYFRWELQKM-GFIVY-GNNDSPVV 437 (519)
T ss_pred -------ccCCCceeecccCChHHHHHHHHHHHhhcCCCcccHHHHHHHHHHhhhHHHHHhhhcC-cEEEe-cCCCCCcc
Confidence 111111111 11112221 333443322345778888999999999999999886 33322 22222111
Q ss_pred EEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC----CCcEEEEeec--CHHHHHHHHHHHHHHH
Q 047983 154 MYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL----KDWLRITFAV--EPSAFEIGLGRMKAFY 226 (233)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~----~~~~Rl~~~~--~~~~l~~~~~~l~~~l 226 (233)
- +-+-.+. .-..+-..+|++ +|.++- .+|.. +..+|+|.++ +.|+++.+++.+...-
T Consensus 438 p---------lll~~~~-----k~~~f~r~~l~~-nigvVv-vgfPatpl~e~r~R~c~Sa~ht~e~ld~~l~~i~~~g 500 (519)
T KOG1357|consen 438 P---------LLLYGPA-----KIVAFSREMLER-NIGVVV-VGFPATPLLESRARFCLSASHTKEDLDRALEVIDRVG 500 (519)
T ss_pred e---------eeecCcc-----cccHHHHHHHhc-CceEEE-EeCCCchHHHhHHHhhhcccccHHHHHHHHHHHhhhc
Confidence 1 1011111 145555666654 444442 24543 6788999886 7888888888776554
No 210
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.10 E-value=5.2e-09 Score=93.76 Aligned_cols=191 Identities=11% Similarity=0.084 Sum_probs=105.0
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCcc-ccccccCCccCEEEEccCccccCCCC-ceEEEEEecCCCccccccchhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHF-VPMGVFGSIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G-~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++.++|++||+++|.||++..|..+|... .....+.+ . +-+++|.++ .| +++|.+++.+ ++.+. +.
T Consensus 256 ~lr~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~P--D---ivt~gK~lg-gG~~Pigav~~~~--~i~~~--~~-- 323 (459)
T PRK11522 256 AVRKLCDEFGALLILDEVQTGMGRTGKMFACEHENVQP--D---ILCLAKALG-GGVMPIGATIATE--EVFSV--LF-- 323 (459)
T ss_pred HHHHHHHHcCCEEEeccceecCCccchhhhhhccCCCC--C---EEEechhhh-CCCccceeEEEcH--HHHHH--hc--
Confidence 68899999999999999999875555321 11122223 2 338899855 46 6999999987 33321 10
Q ss_pred hhhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhc----CCCcccccCCCccEEEEE
Q 047983 80 HSISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKE----IPCITCPKKPEGSMFVMY 155 (233)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~~~~~~g~~~~~ 155 (233)
. +......+++.++...+++++.+ +.-.+ ....+.++++-+++.+.|++ .+....-.... |.++.
T Consensus 324 --~---~~~~~~~T~~gnp~~~Aaala~L-~~i~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~VrG~-Gl~~g- 392 (459)
T PRK11522 324 --D---NPFLHTTTFGGNPLACAAALATI-NVLLE---QNLPAQAEQKGDYLLDGFRQLAREYPDLVQEARGK-GMLMA- 392 (459)
T ss_pred --c---CCcccCCCCCCCHHHHHHHHHHH-HHHhc---chHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEec-eeEEE-
Confidence 0 00111122222222222333433 21111 12334445555555555544 33111102222 44445
Q ss_pred ecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec--CHHHHHHHHHHHHHHHHHHhh
Q 047983 156 CGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV--EPSAFEIGLGRMKAFYYRHAK 231 (233)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~--~~~~l~~~~~~l~~~l~~~~~ 231 (233)
+.+..+ +....+...+.++||.+.+.. ...+.+|++... +++++++++++|.+++++..+
T Consensus 393 --------iel~~~------~~~~~i~~~l~~~Gvl~~~~~--~~~~~lr~~Ppl~~t~~~id~~l~~l~~~l~~~~~ 454 (459)
T PRK11522 393 --------IEFVDN------EIGYNFASEMFRQRVLVAGTL--NNAKTIRIEPPLTLTIEQCEQVLKAARKALAAMRV 454 (459)
T ss_pred --------EEecCc------hHHHHHHHHHHHCCeEEEecC--CCCCEEEEECCccCCHHHHHHHHHHHHHHHHHHHH
Confidence 333211 123445555667899997642 124788887764 899999999999999987653
No 211
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.10 E-value=2.3e-09 Score=88.21 Aligned_cols=194 Identities=15% Similarity=0.070 Sum_probs=110.5
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccC-CccCEEEEccCccccC-CCCceEEEEEecCCCccccccchhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFG-SIVPVLTLGSISKRWI-VPGWRLGWLVTSDPNGILQDLGVAF 78 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~-~~G~R~G~~~~~~~~~~~~~~~~~~ 78 (233)
++|..++++||..+++||+|.-+.++....-+...++ +.+..|..++++|+.| ..| ||.++|. .++ .+++
T Consensus 213 ~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlGga~G---Gyttgp~--~li---~llr 284 (417)
T KOG1359|consen 213 EEISQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALGGASG---GYTTGPK--PLI---SLLR 284 (417)
T ss_pred HHHHHHHHhcCcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhhhhcCCCC---CCccCCh--hHH---HHHH
Confidence 5799999999999999999998888654332333233 2355688999999987 677 9999998 444 2221
Q ss_pred hhhhhhHHhhhhhhhhccCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEec
Q 047983 79 FHSISLNMRMDDYLLLSESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCG 157 (233)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~ 157 (233)
.+-+.+...++-++... .+..++ +. --.-.......+.+.+++++..+.. ++.. ...+ -..+-
T Consensus 285 -------qr~RpylFSnslppavV~~a~ka~--dl-lm~s~~~i~~~~a~~qrfr~~me~a-GftI-sg~~-hPI~p--- 348 (417)
T KOG1359|consen 285 -------QRSRPYLFSNSLPPAVVGMAAKAY--DL-LMVSSKEIQSRQANTQRFREFMEAA-GFTI-SGAS-HPICP--- 348 (417)
T ss_pred -------hcCCceeecCCCChhhhhhhHHHH--HH-HHhhHHHHHHHHHHHHHHHHHHHhc-Ccee-cCCC-CCccc---
Confidence 34445544443333333 222222 00 0011233445556666666666553 3321 1110 00111
Q ss_pred CCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccC-C--CCcEEEEeec--CHHHHHHHHHHHHHHHHHHh
Q 047983 158 SEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVG-L--KDWLRITFAV--EPSAFEIGLGRMKAFYYRHA 230 (233)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~-~--~~~~Rl~~~~--~~~~l~~~~~~l~~~l~~~~ 230 (233)
+-+.... -.......+| +.||.|..-+.-- + ...+|+.++. ++++++..++.+.+..+-+.
T Consensus 349 ------v~lGda~-----lA~~~ad~lL-k~Gi~Vigfs~PvVP~gkariRVqiSAaHt~edid~~i~Af~~vgr~~~ 414 (417)
T KOG1359|consen 349 ------VMLGDAR-----LASKMADELL-KRGIYVIGFSYPVVPKGKARIRVQISAAHTEEDIDRLIEAFSEVGRFLN 414 (417)
T ss_pred ------eecccHH-----HHHHHHHHHH-hcCceEEeecCCcCCCCceEEEEEEehhcCHHHHHHHHHHHHHHHHhhc
Confidence 1122111 1334444555 6699998432211 1 3568887775 89999999999988876543
No 212
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.10 E-value=5.2e-09 Score=91.26 Aligned_cols=114 Identities=14% Similarity=0.195 Sum_probs=68.4
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccC-CCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWI-VPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|+++|+++|+++|+|++|.... +.. ++. +.. + ++++|+||.++ .+|+|+||++++++ .+.
T Consensus 152 ~~I~~~a~~~g~~lvVD~t~~~~~--~~~--p~~-~g~-D--ivv~S~sK~l~G~~g~~~G~v~~~~~-~l~-------- 214 (366)
T PRK07582 152 AALAAAAHAAGALLVVDNTTATPL--GQR--PLE-LGA-D--LVVASDTKALTGHSDLLLGYVAGRDP-ELM-------- 214 (366)
T ss_pred HHHHHHHHHcCCEEEEECCCCCcc--ccC--chh-cCC-c--EEEecccccccCCCCeeEEEEEcCcH-HHH--------
Confidence 478999999999999999996421 221 221 222 2 78899999874 47899999998652 233
Q ss_pred hhhhhHHhhhhhhhh-ccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCc
Q 047983 80 HSISLNMRMDDYLLL-SESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCI 141 (233)
Q Consensus 80 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 141 (233)
.++...... +..+++....+.. ..-+.+....++..++...+.+.|++.+.+
T Consensus 215 ------~~l~~~~~~~g~~~~~~~a~l~~----r~l~tl~~R~~~~~~na~~la~~L~~~p~v 267 (366)
T PRK07582 215 ------AAVERWRLLAGAIPGPFEAWLAH----RSLGTLGLRFARQCANALAVAELLAGHPAV 267 (366)
T ss_pred ------HHHHHHHHHhCCCCCHHHHHHHH----hccccHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 333322221 2222222111111 111234445567778899999999886544
No 213
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.08 E-value=1.2e-08 Score=90.11 Aligned_cols=114 Identities=18% Similarity=0.137 Sum_probs=74.0
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCC-CceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVP-GWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~-G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|+++|+++|++||+|++|..-. ...++. ++.+ +++.|.+|.++.+ +...||++++++ ++.
T Consensus 165 ~~I~~la~~~gi~vIvD~a~a~~~----~~~pl~-~gaD---ivv~S~tK~l~g~~~~~~G~vv~~~~-~l~-------- 227 (405)
T PRK08776 165 RFVIEAAHKVGALTVVDNTFLSPA----LQKPLE-FGAD---LVLHSTTKYINGHSDVVGGAVVARDA-ELH-------- 227 (405)
T ss_pred HHHHHHHHHcCCEEEEECCCcccc----cCCccc-ccCC---EEEecCceeecCCCCceEEEEEeCCH-HHH--------
Confidence 378999999999999999998522 122332 3332 8899999998765 588999988663 232
Q ss_pred hhhhhHHhhhhhhh-hccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCc
Q 047983 80 HSISLNMRMDDYLL-LSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCI 141 (233)
Q Consensus 80 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 141 (233)
.++..... .+...++. .+. +....-++++.+.++..+++..+.+.|++.|.+
T Consensus 228 ------~~l~~~~~~~g~~~s~~-~a~---l~~~gl~tl~~r~~~~~~na~~la~~L~~~p~v 280 (405)
T PRK08776 228 ------QQLVWWANALGLTGSPF-DAF---LTLRGLRTLDARLRVHQENADAIAALLDGHAAV 280 (405)
T ss_pred ------HHHHHHHHhcCCCCCHH-HHH---HHHhhhCcHHHHHHHHHHHHHHHHHHHHcCCCe
Confidence 22322211 22222222 111 111345678889999999999999999886543
No 214
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.07 E-value=7.6e-09 Score=90.96 Aligned_cols=114 Identities=18% Similarity=0.228 Sum_probs=69.3
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEE-EEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGW-LVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~-~~~~~~~~~~~~~~~~~~ 79 (233)
++|+++|+++|+++|+|++|....... ++ ..+. -+++.|+||.++.+|.++|+ +++++ +++
T Consensus 166 ~~I~~la~~~gi~livD~t~~~~~~~~----pl-~~g~---Divv~S~sK~~~g~g~~~GG~vv~~~--~~~-------- 227 (390)
T PRK08133 166 AALAEIAHAAGALLVVDNCFCTPALQQ----PL-KLGA---DVVIHSATKYLDGQGRVLGGAVVGSK--ELM-------- 227 (390)
T ss_pred HHHHHHHHHcCCEEEEECCCcccccCC----ch-hhCC---cEEEeecceeecCCcceEeEEEEcCH--HHH--------
Confidence 478999999999999999997543221 22 1222 37899999999999999955 55554 232
Q ss_pred hhhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCc
Q 047983 80 HSISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCI 141 (233)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 141 (233)
.++...........++..+. .++ .+ -+.+..+.++..+++..+.+.|++.+.+
T Consensus 228 ------~~~~~~~~~~g~~~~~~~a~-~~l-~g-l~tl~~R~~~~~~~a~~la~~L~~~p~v 280 (390)
T PRK08133 228 ------EEVFGFLRTAGPTLSPFNAW-VFL-KG-LETLSLRMEAHSANALALAEWLEAHPGV 280 (390)
T ss_pred ------HHHHHHHHHhCCCCCHHHHH-HHH-cc-cchHHHHHHHHHHHHHHHHHHHHhCCCe
Confidence 22222222111222221211 111 22 2356666677778888999999876543
No 215
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.06 E-value=1.2e-08 Score=91.17 Aligned_cols=196 Identities=14% Similarity=0.045 Sum_probs=101.5
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCcc-ccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHF-VPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
+|.++|++||+++|.||++..|...|... .....+.++ +.++||.++...+++|.+++++ ++.+. +.. .
T Consensus 240 ~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PD-----ivt~gK~l~gG~~P~gav~~~~--~i~~~--~~~-~ 309 (442)
T PRK13360 240 RLREICDKHGILLIFDEVITGFGRLGAPFAAQYFGVTPD-----LLTCAKGLTNGAIPMGAVFVSS--EIHDA--FMQ-G 309 (442)
T ss_pred HHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCCCc-----eeeeeeccccCccceEEEEEcH--HHHHH--hhc-C
Confidence 68999999999999999999886555321 111222232 3488998654337999999887 34421 110 0
Q ss_pred hhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcC---CCcccccCCCccEEEEEec
Q 047983 81 SISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEI---PCITCPKKPEGSMFVMYCG 157 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---~~~~~~~~~~~g~~~~~~~ 157 (233)
... ...+....+++.++...+++.+.+ +.-.++ ...+..+++-+++.+.|+++ +.+.. .... |.+.-
T Consensus 310 ~~~-~~~~~~~~T~~g~pl~~aaa~a~L-~~l~~~---~l~~~~~~~g~~l~~~l~~l~~~~~v~~-vrG~-Gl~~~--- 379 (442)
T PRK13360 310 PEA-GIEFFHGYTYSGHPLACAAALATL-DLYERE---GLLTRAARLAPYWEDALHSLRDAPHVID-IRNL-GLVGA--- 379 (442)
T ss_pred Ccc-ccccccCCCCCCCHHHHHHHHHHH-HHHHhC---CHHHHHHHHHHHHHHHHHHhhcCCCeee-eecc-ceEEE---
Confidence 000 000011122332222222333332 211111 23344455555555555543 22111 1222 33333
Q ss_pred CCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEee--cCHHHHHHHHHHHHHHHHHH
Q 047983 158 SEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFA--VEPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~--~~~~~l~~~~~~l~~~l~~~ 229 (233)
+.+..... ........+...+.++||.+.++. +.+|++.. .+++++++++++|.+.+++.
T Consensus 380 ------~~l~~~~~-~~~~~~~~~~~~l~~~Gvl~~~~~-----~~lr~~Ppl~~t~~eid~~~~~l~~~l~~~ 441 (442)
T PRK13360 380 ------VELAPRDG-KPGKRAYEVFLKCFEKGLMIRYTG-----DILALSPPLIIEEAQIDELFDILAQALKET 441 (442)
T ss_pred ------EEEecCCC-CcchhHHHHHHHHHHCCcEEEecC-----CEEEEeCCCccCHHHHHHHHHHHHHHHHHh
Confidence 22211000 100122334445667899997642 57899844 58999999999999998753
No 216
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.04 E-value=3.1e-08 Score=87.28 Aligned_cols=199 Identities=18% Similarity=0.155 Sum_probs=124.3
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCcc-ccCCCCceEEEEEecCCCccccccchh--
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISK-RWIVPGWRLGWLVTSDPNGILQDLGVA-- 77 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK-~~~~~G~R~G~~~~~~~~~~~~~~~~~-- 77 (233)
++|+++|+++|+++++|-+++- +..+..+..++.+ ++..|--| .+|..| +|.+.+++ +++++|.=.
T Consensus 182 ~~I~~la~~~ga~v~VDaaq~~----~h~~idv~~l~~D---f~afsgHKwl~gP~G--iGvLy~r~--~~l~~l~P~~~ 250 (405)
T COG0520 182 KEIAELAHEHGALVLVDAAQAA----GHLPIDVQELGCD---FLAFSGHKWLLGPTG--IGVLYVRK--ELLEELEPFLG 250 (405)
T ss_pred HHHHHHHHHcCCEEEEECcccc----CccCCCchhcCCC---EEEEcccccccCCCc--eEEEEEch--HHHhhcCCccc
Confidence 4799999999999999999886 3334444444444 88999999 555547 89999988 555432000
Q ss_pred -----hhhhhhhHHhhh-hhhhhccCcchHH--HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCC--
Q 047983 78 -----FFHSISLNMRMD-DYLLLSESVYTTV--GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKP-- 147 (233)
Q Consensus 78 -----~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-- 147 (233)
...+.+...... ....+-.+++... .++...++-...--++++.++.++..+++.+.|++++++..+.++
T Consensus 251 gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~~L~~~~~~~L~~~~~v~i~g~~~~ 330 (405)
T COG0520 251 GGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIEAHERELTEYLLEGLSELPGVEIYGPPDA 330 (405)
T ss_pred CCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCcc
Confidence 000000000000 0011122223332 233333222222236778888899999999999998887765444
Q ss_pred -CccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC--------CCcEEEEeec--CHHHHH
Q 047983 148 -EGSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL--------KDWLRITFAV--EPSAFE 216 (233)
Q Consensus 148 -~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--------~~~~Rl~~~~--~~~~l~ 216 (233)
.++.+.+ .++ ++ +...+...|.++||.++.|..+.. ...+|+|+.. +.++++
T Consensus 331 ~r~~~vsF----------~v~-----~~--~~~dv~~~L~~~gI~vr~g~~ca~p~~~~~~~~~~iR~S~~~YNt~edid 393 (405)
T COG0520 331 DRGGIVSF----------NVK-----GI--HPHDVATLLDEKGIAVRAGHHCAQPLHRLLGVDATIRASLHLYNTEEDVD 393 (405)
T ss_pred cCceEEEE----------EeC-----CC--CHHHHHHHHHhCCeEEEeccccccHHHHhcCCCCceEEEEeecCCHHHHH
Confidence 2444443 232 22 566677778888999999876642 3459999996 899999
Q ss_pred HHHHHHHHHHH
Q 047983 217 IGLGRMKAFYY 227 (233)
Q Consensus 217 ~~~~~l~~~l~ 227 (233)
..++.|+++.+
T Consensus 394 ~l~~aL~~~~~ 404 (405)
T COG0520 394 RLLEALKKALA 404 (405)
T ss_pred HHHHHHHHHhh
Confidence 99998887754
No 217
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.03 E-value=4.7e-09 Score=91.30 Aligned_cols=204 Identities=15% Similarity=0.100 Sum_probs=119.4
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
+.|.++|++||..+|.||+...|...-...+.+..+.++ +.+++|. ...|+++|.+.++. ++++.+.-.
T Consensus 224 ~~Lr~lt~e~G~lLI~DEViTGFR~~~gGaq~~~gi~PD-----lttlGKi-IGGGlP~ga~gGr~--eiM~~~~p~--- 292 (432)
T COG0001 224 EGLRELTEEHGALLIFDEVITGFRVALGGAQGYYGVEPD-----LTTLGKI-IGGGLPIGAFGGRA--EIMEQLAPL--- 292 (432)
T ss_pred HHHHHHHHHcCcEEEEecchhhcccCCcccccccCcCcc-----hhhhhhh-hcCCcceeeeccHH--HHHhhhCCC---
Confidence 468999999999999999999988764456667667675 7899999 77899999999998 555421111
Q ss_pred hhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhh----cCCCcccccCCCccEEEEEe
Q 047983 81 SISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLK----EIPCITCPKKPEGSMFVMYC 156 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~----~~~~~~~~~~~~~g~~~~~~ 156 (233)
..+-+..+++.++.+.+++.+.+ +.-..+ ....+++.+..+.|.+.|+ +. ++.....-.|++|..++
T Consensus 293 -----g~vyqaGT~sgnplamaAG~atl-~~l~~~--~~~y~~l~~~~~~L~~gl~~~~~~~-g~~~~v~~~gsm~~i~F 363 (432)
T COG0001 293 -----GPVYQAGTLSGNPLAMAAGLATL-EELMTE--EGVYERLDALGERLAEGLRAAAERH-GIPLTVNRVGSMFGIFF 363 (432)
T ss_pred -----CCccccCCCCCcHHHHHHHHHHH-HHHHhc--ccHHHHHHHHHHHHHHHHHHHHHHh-CCCeEEeeecceEEEEe
Confidence 22222233444444433333333 110100 0133344444444444443 33 33323445577777655
Q ss_pred cCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeecCHHHHHHHHHHHHHHHHHHhh
Q 047983 157 GSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAVEPSAFEIGLGRMKAFYYRHAK 231 (233)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~~~~~l~~~~~~l~~~l~~~~~ 231 (233)
...++.+..--.. ...+.-..+.. .+.++||.+.|... +.++ +|.+.++++++..++.+.+++++...
T Consensus 364 ~~~~~~n~~da~~--sd~~~~~~~~~-~~l~~GV~l~ps~~---ea~f-lS~ahte~di~~~~~a~~~~~~~~~~ 431 (432)
T COG0001 364 TEEGVRNYADAKR--SDVERFAKFFH-HLLNRGVYLAPSQF---EAGF-LSTAHTEEDIDRTLEAADEAFKELAG 431 (432)
T ss_pred cCCCCCCHHHHHh--hchHHHHHHHH-HHHhCCcccCCccc---ccee-eecccCHHHHHHHHHHHHHHHHHhhc
Confidence 5433322110000 01101223444 56688999999531 2344 78888999999999999998887653
No 218
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.03 E-value=4.8e-09 Score=93.19 Aligned_cols=184 Identities=10% Similarity=0.102 Sum_probs=101.0
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCcc-ccccccCCccCEEEEccCccccCCCC-ceEEEEEecCCCccccccchhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHF-VPMGVFGSIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G-~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
+|.++|++||+++|.||++..|..+|..+ .....+.+ .++ +++|.++ .| +.+|.+++++ ++.+. +.
T Consensus 230 ~l~~lc~~~g~lLI~DEv~tG~GrtG~~fa~~~~gv~P--Di~---t~gK~l~-gG~~p~~av~~~~--~i~~~--~~-- 297 (428)
T PRK07986 230 RVRKLCDREGILLIADEIATGFGRTGKLFACEHAGIAP--DIL---CLGKALT-GGTMTLSATLTTR--EVAET--IS-- 297 (428)
T ss_pred HHHHHHHHcCCEEEEeccccCCccCCCeeeecccCCCC--CEE---Eechhhh-CCcccCcchhchH--HHHHH--hh--
Confidence 68999999999999999998875555321 11122222 233 6899865 56 5888888876 34321 11
Q ss_pred hhhhhHHh----hhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcC---CCcccccCCCccEE
Q 047983 80 HSISLNMR----MDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEI---PCITCPKKPEGSMF 152 (233)
Q Consensus 80 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---~~~~~~~~~~~g~~ 152 (233)
.. +....+++.++...+++.+.+ +.-.++ ..++..+++-+++.+.|+++ +.+.. .... |.+
T Consensus 298 ------~~~~~~~~~~~T~~g~p~~~aaa~a~L-~~i~~~---~~~~~~~~~g~~l~~~l~~l~~~~~i~~-vRg~-Gl~ 365 (428)
T PRK07986 298 ------NGEAGCFMHGPTFMGNPLACAVANASL-SLLESG---DWQQQVAAIEAQLREELAPLRDAPMVAD-VRVL-GAI 365 (428)
T ss_pred ------cCCCCccccCCCCCcCHHHHHHHHHHH-HHHHhC---CHHHHHHHHHHHHHHHHHHHhcCCCEEe-Eecc-ceE
Confidence 10 011122232222222333332 211111 23444444445555555443 22211 1222 444
Q ss_pred EEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEE--eecCHHHHHHHHHHHHHHHHHH
Q 047983 153 VMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRIT--FAVEPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~--~~~~~~~l~~~~~~l~~~l~~~ 229 (233)
+- +.+..+ .....+...+.++||.+.|.. +.+|++ +..+++++++++++|.+.+++.
T Consensus 366 ~~---------ve~~~~------~~~~~~~~~l~~~Gl~~~~~g-----~~i~~~Ppl~it~~ei~~~~~~l~~~l~~~ 424 (428)
T PRK07986 366 GV---------VETTRP------VNMAALQRFFVEQGVWIRPFG-----KLIYLMPPYIILPEQLQRLTAAVNRAVQDE 424 (428)
T ss_pred EE---------EEeCCc------ccHHHHHHHHHHCCcEEEecC-----CEEEEeCCCCCCHHHHHHHHHHHHHHHhhc
Confidence 44 333221 123455666778899998742 578885 4469999999999999998653
No 219
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.02 E-value=1.1e-08 Score=89.74 Aligned_cols=117 Identities=15% Similarity=0.102 Sum_probs=72.2
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceE-EEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRL-GWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~-G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|.++|+++|+++|+|++|....+. .++. .+. -+++.|+||.++++|.|+ ||+++++ +++++ ..
T Consensus 166 ~~I~~la~~~g~~vivD~a~a~~~~~----~pl~-~g~---Div~~S~sK~l~g~g~~~gG~v~~~~--~~i~~--~~-- 231 (386)
T PRK06767 166 KQVIRVAKRNGLLVIVDNTFCSPYLQ----RPLE-LGC---DAVVHSATKYIGGHGDVVAGVTICKT--RALAE--KI-- 231 (386)
T ss_pred HHHHHHHHHcCCEEEEECCCcccccC----Cchh-cCC---cEEEecCcceecCCCCceeEEEEeCh--HHHHH--HH--
Confidence 47899999999999999999753322 1221 222 277889999999999996 8999887 33321 11
Q ss_pred hhhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 047983 80 HSISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITC 143 (233)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 143 (233)
...+. ..+...++..+++ .+ .. -+.+..+.+..++++..+.+.|++.|++..
T Consensus 232 ------~~~~~--~~g~~~~~~~a~l-~~--~~-L~tl~~r~~~~~~~a~~la~~L~~~p~v~~ 283 (386)
T PRK06767 232 ------RPMRK--DIGGIMAPFDAWL-LL--RG-LKTLAVRMDRHCDNAEKIVSFLKNHDAVEG 283 (386)
T ss_pred ------HHHHH--HhCCCCCHHHHHH-HH--cC-CCcHHHHHHHHHHHHHHHHHHHHcCCCccE
Confidence 11111 1222222221111 11 11 123345667779999999999999877653
No 220
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.02 E-value=1.9e-08 Score=88.64 Aligned_cols=114 Identities=18% Similarity=0.231 Sum_probs=68.4
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEE-EEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGW-LVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~-~~~~~~~~~~~~~~~~~~ 79 (233)
++|.++|+++|+++|+|++|....+.. ++ .. ...+++.|+||.++++|+|+|+ +++++ +.++
T Consensus 170 ~~I~~la~~~gi~lvvD~a~a~~~~~~----~~-~~---gaDivv~S~sK~l~g~g~~~GG~vv~~~--~~i~------- 232 (398)
T PRK07504 170 AAVAKIANQAGAKLVVDNVFATPLFQK----PL-EL---GAHIVVYSATKHIDGQGRCLGGVVLSDK--AWIE------- 232 (398)
T ss_pred HHHHHHHHHcCCEEEEECCccccccCC----ch-hh---CCCEEEeeccccccCCccceEEEEEeCc--HHHH-------
Confidence 378999999999999999998654321 12 12 2347899999999999999975 54444 2221
Q ss_pred hhhhhHHhhhhhhh-hccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCc
Q 047983 80 HSISLNMRMDDYLL-LSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCI 141 (233)
Q Consensus 80 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 141 (233)
..++.+.. .+...++. .+...+ ..-+.+..+.++..++...+.+.|++.+.+
T Consensus 233 ------~~~~~~~~~~g~~~s~~-~A~~~l---~~L~tl~~R~~~~~~na~~la~~L~~~p~v 285 (398)
T PRK07504 233 ------EHLQDYFRHTGPSLSPF-NAWTLL---KGLETLPVRVRQQTESAAAIADFLAGHPKV 285 (398)
T ss_pred ------HHHHHHHHHhCCCCCHH-HHHHHH---hccchHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 12222212 22222222 111111 122334555566678888888888876543
No 221
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.02 E-value=2.2e-08 Score=87.81 Aligned_cols=112 Identities=18% Similarity=0.243 Sum_probs=69.8
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceE-EEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRL-GWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~-G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|.++|+++|+++|+|++|....... ++ ..+ .-|++.|+||.++++|.++ |++++++ +++
T Consensus 159 ~~I~~la~~~gi~livD~a~~~~~~~~----pl-~~g---~Divv~S~sK~l~g~g~~~gG~vv~~~--~~~-------- 220 (380)
T TIGR01325 159 AALAELAHAIGALLVVDNVFATPVLQQ----PL-KLG---ADVVVYSATKHIDGQGRVMGGVIAGSE--ELM-------- 220 (380)
T ss_pred HHHHHHHHHcCCEEEEECCCcccccCC----ch-hhC---CCEEEeeccceecCCCCeEEEEEEeCH--HHH--------
Confidence 478999999999999999998654321 22 122 2377889999999999887 6676665 333
Q ss_pred hhhhhHHhhhhhhh-hccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 047983 80 HSISLNMRMDDYLL-LSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPC 140 (233)
Q Consensus 80 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 140 (233)
..++.... .+.. .++..+...+ ..-+.+..+.+...++++.+.+.|++.|.
T Consensus 221 ------~~l~~~~~~~g~~-~~p~~a~~~l---~~l~tl~~r~~~~~~~a~~la~~L~~~p~ 272 (380)
T TIGR01325 221 ------AEVAVYLRHTGPA-MSPFNAWVLL---KGLETLSLRMQKQFDSALAIAEWLQAQPQ 272 (380)
T ss_pred ------HHHHHHHHhhCCC-CCHHHHHHHH---hccCcHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 22222221 2222 2222222221 22344555677788888888899987664
No 222
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.02 E-value=4.8e-09 Score=93.45 Aligned_cols=190 Identities=11% Similarity=0.062 Sum_probs=97.6
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCC-ceEEEEEecCCCccccccchhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++.++|++||+++|.||++..|..+|.- ......+-.+. +-+++|.++ .| +++|.+++++ ++.+. +.
T Consensus 249 ~l~~lc~~~g~llI~DEV~tG~GRtG~~-~a~e~~gv~PD---ivt~gK~lg-~G~~Pigavv~~~--~i~~~--~~--- 316 (442)
T TIGR03372 249 AVRALCDEFGALLILDEVQTGMGRTGKM-FACEHEGVQPD---ILCLAKALG-GGVMPIGATIATE--AVFSV--LF--- 316 (442)
T ss_pred HHHHHHHHcCCEEEEeecccCCCccccc-hhhhhcCCCCC---eeeehhhhc-CCcccceEEEecH--HHHHh--hh---
Confidence 6899999999999999999987655532 11111221122 336899965 57 6999999886 34321 10
Q ss_pred hhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHH-HHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCC
Q 047983 81 SISLNMRMDDYLLLSESVYTTVGAVPQILEKTEE-EFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSE 159 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~ 159 (233)
........+++.++.+.+++++.+ +.-.+ +..++.++.-...++.|.+...+.+....-.... |.++.
T Consensus 317 ----~~~~~~~~T~~gnp~~~Aaa~a~L-~~i~~~~l~~~~~~~G~~l~~~L~~l~~~~~~~i~~vRG~-Gl~~g----- 385 (442)
T TIGR03372 317 ----DNPFLHTTTFGGNPLACAAALATI-NELLEKNLPAQAAIKGDFLLDGFQQLAAEYPDLIIEARGK-GLLMA----- 385 (442)
T ss_pred ----ccCccccCCCCCCHHHHHHHHHHH-HHHHhccHHHHHHHHHHHHHHHHHHHHHhCCCceEEEecc-eEEEE-----
Confidence 000011122322233322333433 11111 1222222222222222322222243221112333 55555
Q ss_pred CcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEee--cCHHHHHHHHHHHHHHH
Q 047983 160 DKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFA--VEPSAFEIGLGRMKAFY 226 (233)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~--~~~~~l~~~~~~l~~~l 226 (233)
+.+..+ .....+...+.++||.+.+... ..+.+|+... .+++++++++++|.+.+
T Consensus 386 ----iel~~~------~~~~~i~~~l~~~Gvl~~~~~~--~~~~lr~~Ppl~~t~~~id~~~~~l~~~~ 442 (442)
T TIGR03372 386 ----IEFRDN------EIGYAFAKELFQQNILVAGTLN--NAKSIRIEPPLTITIEQCALVIKAAKDAL 442 (442)
T ss_pred ----EEeCCh------HHHHHHHHHHHHCCcEEeecCC--CCCEEEEECCcccCHHHHHHHHHHHHHhC
Confidence 334211 1234455556678999975321 2468888666 48999999999998753
No 223
>PRK06105 aminotransferase; Provisional
Probab=99.02 E-value=1.5e-08 Score=90.86 Aligned_cols=192 Identities=15% Similarity=0.082 Sum_probs=102.6
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCcc-ccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHF-VPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
+|.++|++||+++|.||++..|...|.-+ .....+.++ +.++||.++...+++|.+++++ ++.+. +.
T Consensus 243 ~lr~lc~~~~~llI~DEv~tG~GRtG~~f~~~~~~v~PD-----i~~~gK~lggG~~P~~av~~~~--~i~~~--~~--- 310 (460)
T PRK06105 243 KIQAVLRKYDILLVADEVICGFGRTGNMFGCETFGIKPD-----ILVMSKQLSSSYQPLSAVLMNE--KVYDP--IA--- 310 (460)
T ss_pred HHHHHHHHcCCeEEEeccccCCCcCchhhhHHhcCCCCC-----eeeeecccccCcccceEEEEcH--HHHHH--Hh---
Confidence 68899999999999999999886665321 111122222 5588998665336999999987 34321 10
Q ss_pred hhhhHHh---hhhh-hhhccCcchHH--HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhc---CCCcccccCCCccE
Q 047983 81 SISLNMR---MDDY-LLLSESVYTTV--GAVPQILEKTEEEFFSKITDILREAADICCDRLKE---IPCITCPKKPEGSM 151 (233)
Q Consensus 81 ~~~~~~~---~~~~-~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~---~~~~~~~~~~~~g~ 151 (233)
.. .... ...+.+.++.. ++++.+ +.-.++ +..+..++.-+++.+.|++ .+.+.. .... |.
T Consensus 311 -----~~~~~~~~~~h~~T~~gnpl~~aaa~a~L-~~i~~~---~l~~~v~~~g~~l~~~L~~l~~~~~v~~-vrG~-Gl 379 (460)
T PRK06105 311 -----DESGKIGTFGHGFTASGHPVAAAVALENL-AIIEER---DLVGNAAERGARLQARLRALADHPLVGE-VRGV-GL 379 (460)
T ss_pred -----cccccCcccccCCCCCCCHHHHHHHHHHH-HHHHhc---cHHHHHHHHHHHHHHHHHHhhcCCCeEE-EEec-ce
Confidence 00 0000 11222333333 333333 111111 2233333333344444433 332221 2333 44
Q ss_pred EEEEecCCCccccccccccc--CCCCC---hHHHHHHHHhccCEEEECCcccCCCCcEEEEee--cCHHHHHHHHHHHHH
Q 047983 152 FVMYCGSEDKCLLKLNYSLL--EGINS---DTEFALKLAKEESIIVLPGITVGLKDWLRITFA--VEPSAFEIGLGRMKA 224 (233)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~--~~~~~---~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~--~~~~~l~~~~~~l~~ 224 (233)
++- +.+..... .+..+ ....+...+.++||.+.|.. +.+|++.. .++++++++++++.+
T Consensus 380 ~~g---------ie~~~~~~~~~~~~~~~~~a~~i~~~~~~~Gvl~~~~g-----~~i~l~Ppl~it~~eid~~~~~l~~ 445 (460)
T PRK06105 380 IAA---------VELVADKATKTPFEPPGKVGARANAAAHEHGVISRAMG-----DTLAFCPPLIITAAQVDEMVDRFGR 445 (460)
T ss_pred EEE---------EEEecCcccCCCCCchhHHHHHHHHHHHHCCeEEEecC-----CEEEEECCCccCHHHHHHHHHHHHH
Confidence 444 22321100 00000 12345556678899998732 57888755 489999999999999
Q ss_pred HHHHHh
Q 047983 225 FYYRHA 230 (233)
Q Consensus 225 ~l~~~~ 230 (233)
.+++..
T Consensus 446 ~l~~~~ 451 (460)
T PRK06105 446 ALDDVA 451 (460)
T ss_pred HHHHHH
Confidence 998764
No 224
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.01 E-value=1.9e-08 Score=89.85 Aligned_cols=196 Identities=13% Similarity=0.070 Sum_probs=104.7
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCcc-ccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHF-VPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
+|.++|++||+++|.||+++.|..+|... .....+.++ +.++||.++...+++|.+++++ ++++. +. .
T Consensus 243 ~l~~lc~~~g~llI~DEV~tG~GRtG~~~~~~~~gv~PD-----i~~~gK~l~gG~~Pi~av~~~~--~i~~~--~~--~ 311 (445)
T PRK09221 243 RLREICDKHGILLIFDEVITGFGRLGAAFAAERFGVTPD-----IITFAKGLTNGAIPMGAVIASD--EIYDA--FM--Q 311 (445)
T ss_pred HHHHHHHHcCCEEEEeehhhCCCcCchhhHHHhcCCCCC-----EEEeccccccCcccceeeEEcH--HHHHh--hc--c
Confidence 68999999999999999999876555321 111222332 4588998654337899999887 34421 11 0
Q ss_pred hhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcC---CCcccccCCCccEEEEEec
Q 047983 81 SISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEI---PCITCPKKPEGSMFVMYCG 157 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---~~~~~~~~~~~g~~~~~~~ 157 (233)
.......+....+++.++...+++++.+ +.-.+ ....+..++.-+++.+.|+++ +.+.. .... |...-
T Consensus 312 ~~~~~~~~~~~~T~~~~pl~~aaa~a~L-~~i~~---~~l~~~~~~~g~~l~~~l~~l~~~~~v~~-vrg~-Gl~~~--- 382 (445)
T PRK09221 312 GPEYAIEFFHGYTYSAHPVACAAGLATL-DIYRE---EDLFERAAELAPYFEDAVHSLKGLPHVID-IRNI-GLVAG--- 382 (445)
T ss_pred CcccccccccccCCCcCHHHHHHHHHHH-HHHHh---ccHHHHHHHHHHHHHHHHHhhccCCCEEE-EecC-ceEEE---
Confidence 0000000111122332222222333332 21111 123455566666666666554 22211 2222 33343
Q ss_pred CCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEee--cCHHHHHHHHHHHHHHHHHH
Q 047983 158 SEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFA--VEPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~--~~~~~l~~~~~~l~~~l~~~ 229 (233)
+.+..... ........+.+.+.++||.+.++. +.+|++.. .+++++++++++|.+.+.+.
T Consensus 383 ------v~~~~~~~-~~~~~~~~~~~~~~~~Gv~~~~~~-----~~lr~~Ppl~~t~~eid~~~~~l~~~l~~~ 444 (445)
T PRK09221 383 ------IELAPRPG-APGARGYEAFMKCFEKGLLVRYTG-----DTIALSPPLIIEKAQIDELVDALGDALRAV 444 (445)
T ss_pred ------EEEecccc-cccchHHHHHHHHHHCCeEEeecC-----CEEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 22321100 000122344555668899997642 57899844 58999999999999998764
No 225
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.01 E-value=1.6e-08 Score=86.45 Aligned_cols=190 Identities=16% Similarity=0.183 Sum_probs=124.0
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccC--CccCEEEEccCccccCCCCceEEEEEecCCCccccccchhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFG--SIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAF 78 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~--~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~ 78 (233)
|||.+++.+||.+-+.||++.--.|++... -+..-+ .+..-|..+++.|+||.-| |||++.. .++
T Consensus 323 eelcDvah~yGAiTFlDEVHAVGlYG~rGa-GvgerdGvm~kvDiIsGTLgKafGcVG---GYIAat~--------~Lv- 389 (570)
T KOG1360|consen 323 EELCDVAHKYGAITFLDEVHAVGLYGPRGA-GVGERDGVMHKVDIISGTLGKAFGCVG---GYIAATR--------KLV- 389 (570)
T ss_pred HHHHHHHHHhCceeeeehhhhhccccCCCC-CccccCCcchhhhhcccchhhhccccc---ceehhhh--------hHH-
Confidence 689999999999999999999777765332 111111 1222377899999999999 9999988 444
Q ss_pred hhhhhhHHhhhhhhh---hccCcchH-H-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEE
Q 047983 79 FHSISLNMRMDDYLL---LSESVYTT-V-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFV 153 (233)
Q Consensus 79 ~~~~~~~~~~~~~~~---~~~~~~~~-~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~ 153 (233)
+.++++.- ++.+.++. . .+++++ .....++-+.+|+.-+++..++.+.|.++ ++.+...| .-.+
T Consensus 390 -------DmiRSyAaGFIFTTSLPP~vl~GAleaV-r~lk~~eg~~lR~~hqrnv~~~kq~l~~~-GiPVi~~p--SHIi 458 (570)
T KOG1360|consen 390 -------DMIRSYAAGFIFTTSLPPMVLAGALEAV-RILKSEEGRVLRRQHQRNVKYVKQLLMEL-GIPVIPNP--SHII 458 (570)
T ss_pred -------HHHHHhcCceEEecCCChHHHHhHHHHH-HHHhhhhhHHHHHHHHHHHHHHHHHHHHc-CCcccCCC--ccee
Confidence 55565522 23333333 2 444443 11223456778888899999999999886 44432233 2222
Q ss_pred EEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC----CCcEEEEeec--CHHHHHHHHHHHHHHHH
Q 047983 154 MYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL----KDWLRITFAV--EPSAFEIGLGRMKAFYY 227 (233)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~----~~~~Rl~~~~--~~~~l~~~~~~l~~~l~ 227 (233)
- +++.... -..+...-++.+++|.|-. ..|.. +..+||+-++ +++.++..++.+..+..
T Consensus 459 P---------v~vgda~-----l~~~~sd~Li~~h~iYvQa-INyPTV~rG~E~LRiaPTP~HT~~mm~~lv~~l~~vw~ 523 (570)
T KOG1360|consen 459 P---------VRVGDAA-----LAKQASDILISKHNIYVQA-INYPTVARGTERLRIAPTPHHTPQMMNILVNALLDVWN 523 (570)
T ss_pred e---------eeccCHH-----HHHHHHHHHHHhcCeEEEe-ccCCcccccceeeecCCCCCCCHHHHHHHHHHHHHHHH
Confidence 2 2233221 1456677788899999975 34442 5678988775 78888888888877766
Q ss_pred HH
Q 047983 228 RH 229 (233)
Q Consensus 228 ~~ 229 (233)
+.
T Consensus 524 ~v 525 (570)
T KOG1360|consen 524 EV 525 (570)
T ss_pred Hc
Confidence 54
No 226
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.01 E-value=9.1e-09 Score=91.50 Aligned_cols=180 Identities=12% Similarity=0.062 Sum_probs=100.8
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCcc-ccccccCCccCEEEEccCccccCCCCc-eEEEEEecCCCccccccchhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHF-VPMGVFGSIVPVLTLGSISKRWIVPGW-RLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~-R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
+|.++|++||+.+|+||++.++..+|..+ .....+.+ .++ ++||.++ .|+ .++.+++++ ++.
T Consensus 233 ~l~~lc~~~~~llI~DEv~tG~Gr~G~~~~~~~~~v~p--Di~---~~gK~l~-gG~~p~~a~~~~~--~~~-------- 296 (427)
T TIGR00508 233 RVQALCKQYDILLIADEIATGFGRTGKLFACEHAGVVP--DIL---CVGKALT-GGYMTLSATVTTD--KVA-------- 296 (427)
T ss_pred HHHHHHHHcCCEEEEeccccCCCcCCccchhhhcCCCC--CEE---Eechhhh-cCcccceEEEEcH--HHH--------
Confidence 68999999999999999998876655432 11222333 233 4799974 574 778888776 333
Q ss_pred hhhhhHHhhhh--------hhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccc--cCCCc
Q 047983 80 HSISLNMRMDD--------YLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCP--KKPEG 149 (233)
Q Consensus 80 ~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~--~~~~~ 149 (233)
..+.. ..+++.++...+++++.+ +.-.+ .+..+.++++-+++.+.|+++...... ....
T Consensus 297 ------~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l-~~l~~---~~~~~~~~~~~~~l~~~L~~l~~~~~i~~vrg~- 365 (427)
T TIGR00508 297 ------QTISSGEAGCFMHGPTFMGNPLACAVAEASL-AILLE---GEWQKQVSAIENQLKRELSPLRKNPVVKDVRVL- 365 (427)
T ss_pred ------HHHhcCCCCccccCCCCCcCHHHHHHHHHHH-HHHHh---CCHHHHHHHHHHHHHHHHHHhhcCCCEEeEecc-
Confidence 22211 112222222222333333 21111 123455666666666666554221100 1122
Q ss_pred cEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEee--cCHHHHHHHHHHHHHHHH
Q 047983 150 SMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFA--VEPSAFEIGLGRMKAFYY 227 (233)
Q Consensus 150 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~--~~~~~l~~~~~~l~~~l~ 227 (233)
|..+- +.+..+ .....+.+.+.++||.+.+.. +.+|++.. .++++++++++.+.+.++
T Consensus 366 G~~~~---------i~~~~~------~~~~~~~~~l~~~Gv~~~~~~-----~~l~~~ppl~~t~~~id~~~~~l~~~l~ 425 (427)
T TIGR00508 366 GAIGV---------VEMYKP------VNVEELQKKFVEQGVWIRPFG-----KLIYVMPPYIITTEQLQKLTAALIEALH 425 (427)
T ss_pred ccEEE---------EEECCc------cCHHHHHHHHHHCCeEEEecC-----CEEEEECCCCCCHHHHHHHHHHHHHHHh
Confidence 33333 233211 123445556668899997632 46888666 589999999999999886
Q ss_pred H
Q 047983 228 R 228 (233)
Q Consensus 228 ~ 228 (233)
+
T Consensus 426 ~ 426 (427)
T TIGR00508 426 E 426 (427)
T ss_pred c
Confidence 5
No 227
>PRK07480 putative aminotransferase; Validated
Probab=99.01 E-value=1.3e-08 Score=91.17 Aligned_cols=200 Identities=13% Similarity=0.097 Sum_probs=101.7
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCcc-ccccccCCccCEEEEccCccccCCCC-ceEEEEEecCCCccccccchhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHF-VPMGVFGSIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G-~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
+|.++|++||+++|.||++..|..+|... .....+.++ +-+++|..+ .| +++|.+++++ ++.+. +..
T Consensus 244 ~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PD-----iv~~gK~l~-gG~~Pi~av~~~~--~i~~~--~~~- 312 (456)
T PRK07480 244 EIQRICRKYDILLVADEVICGFGRTGEWFGSQHFGIKPD-----LMTIAKGLT-SGYIPMGAVGVGD--RVAEV--LIE- 312 (456)
T ss_pred HHHHHHHHcCCEEEEechhhCCCcCcchhhhhhcCCCCC-----eeeeehhhc-cCCccceEEEEcH--HHHHH--Hhc-
Confidence 68999999999999999999986665321 112222232 457899855 47 4899999987 34321 100
Q ss_pred hhhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHH-HHHHHHHHHHHHHHHHHHHH---hhcCCCcccccCCCccEEEEE
Q 047983 80 HSISLNMRMDDYLLLSESVYTTVGAVPQILEKTEE-EFFSKITDILREAADICCDR---LKEIPCITCPKKPEGSMFVMY 155 (233)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~---L~~~~~~~~~~~~~~g~~~~~ 155 (233)
. ...+....+++.++...+++++.+ +.-.+ +.+++.+ ++.-+.+.+. +.+.+.+.. ....|.++..-
T Consensus 313 ~----~~~~~~~~T~~gnpl~~Aaa~a~L-~~l~~~~l~~~~~---~~~g~~l~~~l~~l~~~~~i~~-vrG~Glm~gie 383 (456)
T PRK07480 313 E----GGEFNHGFTYSGHPVAAAVALANL-RILRDEGIVERVR---DDTGPYLQKRLRELADHPLVGE-VRGVGLVGAIE 383 (456)
T ss_pred C----CCCcccCCCCCcCHHHHHHHHHHH-HHHHhCCHHHHHH---HHHHHHHHHHHHHhhcCCCeee-EEeecceEEEE
Confidence 0 000112223333333332444433 11111 1222221 1222222222 333332221 33444443331
Q ss_pred ecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec--CHHHHHHHHHHHHHHHHHHhh
Q 047983 156 CGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV--EPSAFEIGLGRMKAFYYRHAK 231 (233)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~--~~~~l~~~~~~l~~~l~~~~~ 231 (233)
+-++.+.. -+.. ........+...+.++||.+.+. + +.+|++... +++++++++++|.+.+.+.++
T Consensus 384 ~~~~~~~~--~~~~---~~~~~~~~~~~~~~~~Gll~~~~---~--~~l~~~Ppl~it~~eid~~~~~l~~al~~~~~ 451 (456)
T PRK07480 384 LVKDKATR--ERFE---AGGGVGTICRDHCFANGLIMRAV---G--DRMIISPPLVITHAEIDELVEKARKALDATAA 451 (456)
T ss_pred Eecccccc--ccCc---chhhHHHHHHHHHHHCCcEEeec---C--CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 11110000 0000 00011244555666889999763 1 568887764 899999999999999988754
No 228
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.00 E-value=1.1e-08 Score=90.86 Aligned_cols=189 Identities=13% Similarity=0.054 Sum_probs=101.8
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCcc-ccccccCCccCEEEEccCccccCCCC-ceEEEEEecCCCccccccchhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHF-VPMGVFGSIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G-~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
+|.++|++||+++|.||++..|..+|... .....+.+ .++ +++|.++ .| +.++-+++++ ++.+. +.
T Consensus 232 ~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~P--Div---~~gK~l~-gG~~p~~a~~~~~--~i~~~--~~-- 299 (429)
T PRK06173 232 KARELCDQYGVLLIFDEIATGFGRTGKLFALEHAGVVP--DIM---CIGKALT-GGYLTLSATITTE--AIAQT--IC-- 299 (429)
T ss_pred HHHHHHHHcCCeEEecchhcCCCcCCcchHHHhcCCCC--CEE---Eeehhhh-CCccccceEEecH--HHHHH--Hh--
Confidence 68999999999999999998875555321 11122222 223 4999865 46 4788888776 33321 10
Q ss_pred hhhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccc--cCCCccEEEEEec
Q 047983 80 HSISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCP--KKPEGSMFVMYCG 157 (233)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~--~~~~~g~~~~~~~ 157 (233)
.+....+....+++.++...+++++.+ +.-.+ ...++.++++-+++.+.|+++.+.... .... |..+-
T Consensus 300 --~~~~~~~~~~~T~~g~p~~~aaa~a~l-~~i~~---~~~~~~~~~~g~~l~~~L~~~~~~~~v~~vRg~-Gl~~~--- 369 (429)
T PRK06173 300 --SGEAKCFMHGPTFMANPLACAIAAESI-RLLLE---SPWQQNIQRIEAQLKQELAPAAEFDSVAEVRVL-GAIGV--- 369 (429)
T ss_pred --cCCCCccccCCCCCcCHHHHHHHHHHH-HHHHh---CCHHHHHHHHHHHHHHHHHHhhcCCCeeeeecc-ceEEE---
Confidence 000000011112222222221333333 11111 123455555556666666543122111 1222 44444
Q ss_pred CCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEee--cCHHHHHHHHHHHHHHHHHH
Q 047983 158 SEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFA--VEPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~--~~~~~l~~~~~~l~~~l~~~ 229 (233)
+.+..+ .....+.+.|.++||.+.+.. +.+|+... .+++++++++++|.+.+.+.
T Consensus 370 ------iel~~~------~~~~~i~~~l~e~Gi~v~~~g-----~~l~~~Ppl~it~~ei~~~~~~l~~~l~~~ 426 (429)
T PRK06173 370 ------VEMKEP------VNMATLQPRFVEHGIWVRPFG-----KLVYIMPPFIISPDELSQLTSGLLRVLKQE 426 (429)
T ss_pred ------EEeCCc------ccHHHHHHHHHHCCeEEEecC-----CEEEEeCCccCCHHHHHHHHHHHHHHHHHH
Confidence 333221 133455666778899998742 57888655 48999999999999999764
No 229
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.00 E-value=2.5e-09 Score=92.58 Aligned_cols=184 Identities=13% Similarity=0.024 Sum_probs=103.5
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|.++|+++|+++|+|+++..-. .+..+. .+.--+++.|..|.++.+| +|++++++. ........
T Consensus 158 ~~I~~l~~~~~~~~ivD~a~~~g~----~~~~~~---~~~~D~~~~s~~K~~gp~g--~g~l~~~~~--~~~~~~~~--- 223 (353)
T TIGR03235 158 REIAEVLEAHEAFFHVDAAQVVGK----ITVDLS---ADRIDLISCSGHKIYGPKG--IGALVIRKR--GKPKAPLK--- 223 (353)
T ss_pred HHHHHHHHHcCCEEEEEchhhcCC----cccccc---ccCCCEEEeehhhcCCCCc--eEEEEEccC--cccccccC---
Confidence 478999999999999999977522 122222 2222367778899876666 899998873 21100000
Q ss_pred hhhhHHhhhhhhhhccC-cchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecC
Q 047983 81 SISLNMRMDDYLLLSES-VYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGS 158 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~ 158 (233)
......... ..+..+ ++... .++.+.++. ..+..++.+++++++++.+++.|++ .++....++......+
T Consensus 224 ~~~~~~~~~--~~~~~gt~~~~~~~al~~al~~-~~~~~~~~~~~~~~l~~~l~~~l~~-~g~~~~~~~~~~~~~i---- 295 (353)
T TIGR03235 224 PIMFGGGQE--RGLRPGTLPVHLIVGMGEAAEI-ARRNAQAWEVKLRAMRNQLRDALQT-LGVKLNGDPAETIPHI---- 295 (353)
T ss_pred ceeeCCCCc--CccccCCCChHHHHHHHHHHHH-HHhhHHHHHHHHHHHHHHHHHHhcc-CCeEEeCCcccccCCE----
Confidence 000000000 001111 12222 333333321 2235677888999999999999987 3554322332221112
Q ss_pred CCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCC----CcEEEEeecCHHHHHH
Q 047983 159 EDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLK----DWLRITFAVEPSAFEI 217 (233)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~----~~~Rl~~~~~~~~l~~ 217 (233)
+.+..+ ++ +.+.+...|++ +|.|.+|..|+.. .++|.+++.+++.+..
T Consensus 296 -----~~~~~~---~~--~~~~v~~~L~~-~i~v~~g~~~~~~~~~~~~~l~~~g~~~~~~~~ 347 (353)
T TIGR03235 296 -----LNFSID---GV--NSEALIVNLRA-DAAVSTGSACSSSKYEPSHVLQAMGLDTDRARG 347 (353)
T ss_pred -----EEEEeC---Cc--CHHHHHHHHhC-CeEEEchhhcCCCCCCCCHHHHHcCCCHHHhCc
Confidence 112222 22 45667777765 9999999999753 3788888887665443
No 230
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.00 E-value=1.8e-08 Score=90.27 Aligned_cols=190 Identities=16% Similarity=0.101 Sum_probs=101.0
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCcc-ccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHF-VPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|.++|++||+++|.||++..|..+|... .....+.+ .++ +++|.++ .|+.+|.+++++ ++.
T Consensus 246 ~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~P--Div---~~gK~l~-gG~pi~av~~~~--~i~-------- 309 (457)
T PRK05639 246 KELKKLLDEHGILLVMDEVQTGIGRTGKWFASEWFEVKP--DLI---IFGKGVA-SGMGLSGVIGRK--ELM-------- 309 (457)
T ss_pred HHHHHHHHHcCCEEEEechhhccCcCchHHHHHhcCCCC--CEE---Eechhhc-CCCcceeEEehH--HHH--------
Confidence 368999999999999999999875555321 11122223 233 3899855 479999999987 333
Q ss_pred hhhhhHHhhhhhhhhccCcchHH--HHHHHHhhhc-HHHHHHHHHHHHHHHHHHHHHHhhc----CCCcccccCCCccEE
Q 047983 80 HSISLNMRMDDYLLLSESVYTTV--GAVPQILEKT-EEEFFSKITDILREAADICCDRLKE----IPCITCPKKPEGSMF 152 (233)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~-~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~~~~~~g~~ 152 (233)
+........+.+.++.. ++++.+ +.- .++.++ ..+++-+++.+.|++ .+.+.. ....| .+
T Consensus 310 ------~~~~~~~~~T~~g~p~~~aaa~a~l-~~l~~~~l~~----~~~~~g~~l~~~L~~l~~~~~~~~~-VrG~G-l~ 376 (457)
T PRK05639 310 ------DLTSGSALLTPAANPVISAAAEATL-EIIEEENLLK----NALKVGEFIKKRLLEMKESFEVIGD-VRGKG-LM 376 (457)
T ss_pred ------hhcCCCcccCCCcCHHHHHHHHHHH-HHHHHccHHH----HHHHHHHHHHHHHHHHHHhCCCEEe-eccce-eE
Confidence 21110111222333332 333332 211 112222 222233333333333 322221 33333 33
Q ss_pred EEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEee--cCHHHHHHHHHHHHHHHHHHh
Q 047983 153 VMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFA--VEPSAFEIGLGRMKAFYYRHA 230 (233)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~--~~~~~l~~~~~~l~~~l~~~~ 230 (233)
+. +.+..+...+.......+.+.+.++||.+.+.... .+.+|+... .+++++++++++|.+.+++..
T Consensus 377 ~g---------ve~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~g~~--~~~lr~~Ppl~it~~~id~~~~~l~~~l~~~~ 445 (457)
T PRK05639 377 IG---------VEIVKENGKPDPELTGKICWRAFELGLILPSYGMF--GNVIRITPPLVITKEIAEKGLEIMERAIKDAL 445 (457)
T ss_pred EE---------EEEecCCCCCCHHHHHHHHHHHHhCCeEEeecCCC--CCEEEEeCCCccCHHHHHHHHHHHHHHHHHHH
Confidence 33 22211110000012344555566789999764211 468888766 489999999999999997753
No 231
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.00 E-value=2.3e-08 Score=87.35 Aligned_cols=114 Identities=15% Similarity=0.122 Sum_probs=71.2
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCC-ceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|+++|+++|+++|+|++|....+. .++ .. ...+++.|+||.++++| .+.||+++++. +++
T Consensus 145 ~~i~~la~~~g~~livD~t~~~~~~~----~~~-~~---g~Divv~S~tK~l~g~~~~~gG~v~~~~~-~l~-------- 207 (369)
T cd00614 145 EAIAELAHEHGALLVVDNTFATPYLQ----RPL-EL---GADIVVHSATKYIGGHSDVIAGVVVGSGE-ALI-------- 207 (369)
T ss_pred HHHHHHHHHcCCEEEEECCCcchhcC----Chh-hh---CCcEEEeccceeccCCCCceEEEEEeCcH-HHH--------
Confidence 37899999999999999999865431 112 11 33488999999988776 89999999762 233
Q ss_pred hhhhhHHhhhhhhh-hccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCc
Q 047983 80 HSISLNMRMDDYLL-LSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCI 141 (233)
Q Consensus 80 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 141 (233)
.+++.... ++...++...++ .+ ... +.+....++..++++.+.+.|++.+.+
T Consensus 208 ------~~l~~~~~~~g~~~~p~~a~~-~l--~~l-~tl~~r~~~~~~na~~la~~L~~~~~v 260 (369)
T cd00614 208 ------QRLRFLRLALGTILSPFDAWL-LL--RGL-KTLPLRMERHSENALKVAEFLEKHPKV 260 (369)
T ss_pred ------HHHHHHHHhhCCCCCHHHHHH-HH--cCC-CCHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 22222211 222223222111 11 111 234456677788999999999887644
No 232
>PRK08297 L-lysine aminotransferase; Provisional
Probab=98.98 E-value=1e-08 Score=91.57 Aligned_cols=191 Identities=13% Similarity=0.145 Sum_probs=94.5
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|.++|++||+++|.||+++.|..+|... .....+-...++ +++|.++ +|.+++.+ .+. .+..
T Consensus 249 ~~lr~lc~~~g~llI~DEV~tGfGRtG~~~-a~~~~gv~PDiv---~~gK~l~-----~~a~l~~~--~i~---~~~~-- 312 (443)
T PRK08297 249 AAMRELCDEHDALLIFDEVQTGVGLTGTAW-AYQQLGVRPDIV---AFGKKTQ-----VCGIMAGR--RVD---EVED-- 312 (443)
T ss_pred HHHHHHHHHcCCEEEEechhhccCccchHH-HHHhcCCCCCEE---Eeccccc-----ccceecch--HHH---Hhhh--
Confidence 368999999999999999999986665321 111122122233 6899753 23333333 111 0110
Q ss_pred hhhhHHhhhhhhhhccCcchHHHHHHHHhhh-cHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCC
Q 047983 81 SISLNMRMDDYLLLSESVYTTVGAVPQILEK-TEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSE 159 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~ 159 (233)
.. .........+++.++.+.+++.+.+ +. ..++..++.++.-+..++.+.+..++.+.+....... |.++.
T Consensus 313 ~~-~~~~~~~~~T~~gnpl~~aaa~a~L-~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~vrg~-G~~~~----- 384 (443)
T PRK08297 313 NV-FAVSSRINSTWGGNLVDMVRARRIL-EVIEEDGLVENAARQGEYLLARLEELAAEFPAVVSNVRGR-GLMCA----- 384 (443)
T ss_pred hh-ccCccccCCCCCccHHHHHHHHHHH-HHHHhcCHHHHHHHHHHHHHHHHHHHHHHCCCcceeeecc-ceEEE-----
Confidence 00 0000112223333333322333333 11 1112233333332233333333323344332113444 44444
Q ss_pred CcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEE--EeecCHHHHHHHHHHHHHHHHHH
Q 047983 160 DKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRI--TFAVEPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl--~~~~~~~~l~~~~~~l~~~l~~~ 229 (233)
+.++.. .....+...+.++||.+.|+. .+.+|+ ++..+++++++++++|.+++.+.
T Consensus 385 ----i~~~~~------~~~~~~~~~l~~~Gvl~~~~~----~~~lr~~P~l~~t~~eid~~l~~l~~~l~~~ 442 (443)
T PRK08297 385 ----FDLPTT------ADRDEVIRRLWEEGVLVLPCG----ERSIRFRPALTVTTEEIDAAIDALRRALPEV 442 (443)
T ss_pred ----EEecCH------HHHHHHHHHHHHCCEEEecCC----CCeEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 334311 123344455558899998853 256788 45568999999999999998764
No 233
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=98.97 E-value=5.5e-08 Score=87.17 Aligned_cols=194 Identities=12% Similarity=0.077 Sum_probs=113.1
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCc-cccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTH-FVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~-~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
+|.++|+++|+++++|.+++--...... +.++. .--+++.|..|++++|. -|++.+++ .+.+ .+.
T Consensus 201 ~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~~~~-----~~D~l~~S~hK~l~GP~--Gg~l~~~~--~~~~--~l~--- 266 (452)
T PTZ00094 201 RFREICDSVGAYLMADIAHTSGLVAAGVLPSPFP-----YADVVTTTTHKSLRGPR--SGLIFYRK--KVKP--DIE--- 266 (452)
T ss_pred HHHHHHHHcCCEEEEeccchhccccCCCCCCCCC-----CCcEEEcCCccCCCCCC--ceEEEEec--ccch--HHH---
Confidence 6889999999999999999964443321 11221 12288999999764333 38888865 2321 111
Q ss_pred hhhhHHhhhhhh--hhccCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEec
Q 047983 81 SISLNMRMDDYL--LLSESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCG 157 (233)
Q Consensus 81 ~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~ 157 (233)
..+.... .+..+++... ++++..++.-.....++.++.+.++.+++.+.|.+. ++.............
T Consensus 267 -----~~~~~~~~p~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~~-g~~v~~~~~~~~~~~--- 337 (452)
T PTZ00094 267 -----NKINEAVFPGLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAALEKR-GYDLVTGGTDNHLVL--- 337 (452)
T ss_pred -----HhhccccCCCCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhC-CcEEecCCCCCceEe---
Confidence 1221111 1111222222 444443322222345677889999999999999775 443222111112233
Q ss_pred CCCcccccccccccCCCCChHHHHHHHHhccCEEE-ECCcccCC----CCcEEEEeec------CHHHHHHHHHHHHHHH
Q 047983 158 SEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIV-LPGITVGL----KDWLRITFAV------EPSAFEIGLGRMKAFY 226 (233)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v-~pg~~f~~----~~~~Rl~~~~------~~~~l~~~~~~l~~~l 226 (233)
+.+... ++ +...+...|.++||.+ .+|..... .+++|+++.. ++++++.+.+.|.+.+
T Consensus 338 ------v~~~~~---~~--~~~~~~~~L~~~gI~vs~~~~p~~~~~~~~~~vRis~~~~tt~g~~~~di~~l~~~l~~~~ 406 (452)
T PTZ00094 338 ------VDLRPF---GI--TGSKMEKLLDAVNISVNKNTIPGDKSALNPSGVRLGTPALTTRGAKEKDFKFVADFLDRAV 406 (452)
T ss_pred ------ecCCcC---CC--CHHHHHHHHHHCCcEEecccCCCCCcCCCCCeEEECCHHHHhCCCCHHHHHHHHHHHHHHH
Confidence 223222 22 5567777788889999 44433321 4789998864 3789999999999888
Q ss_pred HHH
Q 047983 227 YRH 229 (233)
Q Consensus 227 ~~~ 229 (233)
...
T Consensus 407 ~~~ 409 (452)
T PTZ00094 407 KLA 409 (452)
T ss_pred HHH
Confidence 753
No 234
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=98.97 E-value=4.2e-08 Score=85.47 Aligned_cols=198 Identities=17% Similarity=0.113 Sum_probs=108.0
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|.++|+++|+++|+|++++.... +..+. ...--+++.|..|.++.|. -+|.++.++.. .++.+......
T Consensus 157 ~~i~~l~~~~~~~livD~a~~~g~~----~~~~~---~~~~D~~~~s~~K~l~~p~-g~g~l~~~~~~-~~~~~~~~~~~ 227 (376)
T TIGR01977 157 EEIGELAQENGIFFILDAAQTAGVI----PIDMT---ELAIDMLAFTGHKGLLGPQ-GTGGLYIREGI-KLKPLKSGGTG 227 (376)
T ss_pred HHHHHHHHHcCCEEEEEhhhccCcc----CCCch---hcCCCEEEecccccccCCC-CceEEEEcCCc-CcCceecCCCc
Confidence 3789999999999999999986322 11121 1222378899999765443 25676666531 22211100000
Q ss_pred --hhhhH--HhhhhhhhhccCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCC---CccEE
Q 047983 81 --SISLN--MRMDDYLLLSESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKP---EGSMF 152 (233)
Q Consensus 81 --~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~---~~g~~ 152 (233)
..... .........+ .++... .++...++...+.-.+.++++.++..+.+.+.|++.+++..+.+. ..+..
T Consensus 228 ~~~~~~~~~~~~~~r~~~~-t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 306 (376)
T TIGR01977 228 SHSALIDQPSELPDRFESG-TLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLNGLREINKVKIYGPADPANRVGV 306 (376)
T ss_pred cccccccccccchhhccCC-CCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCccccCCe
Confidence 00000 0000000111 122222 333333322122234567778888888999998876665542211 11334
Q ss_pred EEEecCCCcccccccccccCCCCChHHHHHHHHhcc-CEEEECCcccC----------CCCcEEEEeec--CHHHHHHHH
Q 047983 153 VMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEE-SIIVLPGITVG----------LKDWLRITFAV--EPSAFEIGL 219 (233)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~-gi~v~pg~~f~----------~~~~~Rl~~~~--~~~~l~~~~ 219 (233)
++ +.++ +. +.+.+...|.++ ||.+.+|..+. ..+++|+++.. +.++++.++
T Consensus 307 v~---------~~~~-----~~--~~~~~~~~L~~~~gi~v~~g~~~~~~~~~~~g~~~~~~iRis~~~~~t~~dv~~~~ 370 (376)
T TIGR01977 307 VS---------FTVE-----GI--DSEEVADILDEKFDIATRTGLHCAPLAHKTIGTFATGTIRLSLGYFNTEEEIEKLL 370 (376)
T ss_pred EE---------EEEC-----CC--CHHHHHHHHhccCCEEEEcccccchHHHHHhCCCCCCeEEEecCCCCCHHHHHHHH
Confidence 44 2332 22 334455555555 99999987663 24789999986 789999998
Q ss_pred HHHHH
Q 047983 220 GRMKA 224 (233)
Q Consensus 220 ~~l~~ 224 (233)
+.|++
T Consensus 371 ~~l~~ 375 (376)
T TIGR01977 371 EALSE 375 (376)
T ss_pred HHHhh
Confidence 88864
No 235
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=98.97 E-value=4.8e-08 Score=86.14 Aligned_cols=113 Identities=17% Similarity=0.212 Sum_probs=67.8
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceE-EEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRL-GWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~-G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|+++|+++|+++|+|++|....... ++. ... + +++.|+||.++.+|-++ ||+++++ +++
T Consensus 169 ~~I~~la~~~gi~livD~t~a~~~~~~----~l~-~~~-D--ivv~S~sK~l~g~~~~~gG~vv~~~--~l~-------- 230 (398)
T PRK08249 169 ERLAAAAKKVGALVVVDNTFATPINQN----PLA-LGA-D--LVIHSATKFLSGHADALGGVVCGSK--ELM-------- 230 (398)
T ss_pred HHHHHHHHHcCCEEEEECCcCccccCC----chh-hCC-C--EEeccCceecCCCCCceEEEEECCH--HHH--------
Confidence 368999999999999999999654321 221 222 2 77899999998888877 5555543 333
Q ss_pred hhhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 047983 80 HSISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPC 140 (233)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 140 (233)
.+++..........++. .+.+. ...-+.+....++..+++..+.+.|++.+.
T Consensus 231 ------~~l~~~~~~~g~~~s~~--~a~l~-l~~l~tL~~R~~~~~~na~~la~~L~~~p~ 282 (398)
T PRK08249 231 ------EQVYHYREINGATMDPM--SAYLI-LRGMKTLKLRVRQQQESAMALAKYLQTHPK 282 (398)
T ss_pred ------HHHHHHHHhcCCCCCHH--HHHHH-HhCcchHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 33332222221222221 11111 112234455667778888888899987553
No 236
>PRK07046 aminotransferase; Validated
Probab=98.96 E-value=1.7e-08 Score=90.27 Aligned_cols=207 Identities=9% Similarity=-0.018 Sum_probs=98.3
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh-
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH- 80 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~- 80 (233)
+|.++|++||+++|.||+.. |-.+-........+.++ +-+++|..+ .|+.+|.+++++ ++++ .+...
T Consensus 243 ~lr~lc~~~g~llI~DEV~t-fr~g~Gg~~~~~gv~PD-----i~t~gK~lg-gG~Pi~av~g~~--~i~~---~~~~~~ 310 (453)
T PRK07046 243 ALRELTRRYGTLLVIDETHT-ISSGPGGYTRAHGLEPD-----FLVVGKPIA-GGVPCAVYGFSA--ELAE---RAQAAK 310 (453)
T ss_pred HHHHHHHHhCCEEEEEcccc-CccCCcchhHHhCCCcc-----ceeehhhhc-CCCcceeeeehH--HHHH---HHhhcc
Confidence 68899999999999999987 43221122222223332 447899955 589999999987 4442 11000
Q ss_pred hhhhHHhhhhhhhhccCcchHHHHHHHHhhh-cHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCC
Q 047983 81 SISLNMRMDDYLLLSESVYTTVGAVPQILEK-TEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSE 159 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~ 159 (233)
............+++.++.+.+++++.+ +. ..++..++..+.-..-++.+.+..++.+.... ....|.++...+.++
T Consensus 311 ~~~~~~~~~~~~T~~gnpl~~aa~~a~L-~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~-v~g~G~~~~i~~~~~ 388 (453)
T PRK07046 311 ASAPPGHSGIGTTLSANALAMAAMRATL-AEVMTEAAYAHMLALAARLAAGLRAVIARHGLPWH-VTRVGARVEFQFAPT 388 (453)
T ss_pred ccCCCCCceeCCCCcccHHHHHHHHHHH-HHHhcccHHHHHHHHHHHHHHHHHHHHHhCCCCeE-EEEeCcEEEEEEeCC
Confidence 0000000001112332333322333332 11 11122222222222222233232333321111 233344433311111
Q ss_pred CcccccccccccCCCC-ChHHHHHHHHhccCEEEECCcccCCCCcEEEEeecCHHHHHHHHHHHHHHHHHHh
Q 047983 160 DKCLLKLNYSLLEGIN-SDTEFALKLAKEESIIVLPGITVGLKDWLRITFAVEPSAFEIGLGRMKAFYYRHA 230 (233)
Q Consensus 160 ~~~~~~~~~~~~~~~~-~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~~~~~l~~~~~~l~~~l~~~~ 230 (233)
.+....-... ... .-...+...+.++||.+.|.. +.++++...+++++++.++++.+.+++..
T Consensus 389 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~Gv~~~~~~-----~~~~~~p~~t~~did~~~~~~~~~l~~~~ 452 (453)
T PRK07046 389 PPRNGAEAAA---ALDPELEAALHLYLLNRGVLITPFH-----NMMLVCPATTAADVDRLVAAFDACLGELL 452 (453)
T ss_pred CCCCHHHHhc---ccCHHHHHHHHHHHHHCCCEEeccc-----CcEEEeCCCCHHHHHHHHHHHHHHHHHHh
Confidence 1111000000 000 011233344556899998732 46788877799999999999999997653
No 237
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=98.95 E-value=3.2e-08 Score=82.10 Aligned_cols=188 Identities=14% Similarity=0.122 Sum_probs=128.1
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccc--ccccc-CCccCEEEEccCccccCCCCceEEEEEe--cCCCccccccch
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFV--PMGVF-GSIVPVLTLGSISKRWIVPGWRLGWLVT--SDPNGILQDLGV 76 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~--~~~~~-~~~~~~i~~~s~sK~~~~~G~R~G~~~~--~~~~~~~~~~~~ 76 (233)
+|+++.++.+...+.|-+|++|.-++...- .+... .....++++-||+|.||+.|-|+|-+.. .++ +.+
T Consensus 202 qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g~e~fv~QSFaKNfGlYneRvGnltvv~~n~-a~i----- 275 (410)
T KOG1412|consen 202 QIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQGFELFVCQSFAKNFGLYNERVGNLTVVVNNP-AVI----- 275 (410)
T ss_pred HHHHHHHhcCceeeeehhhcccccCCccccHHHHHHHHhcCCeEEEEhhhhhhcccccccccceEEEecCh-hHH-----
Confidence 578888899999999999999987653321 11111 2335589999999999999999999543 332 122
Q ss_pred hhhhhhhhHHhhhhhhh----h-ccCcchHH-HHHHHHhhhcH-----HHHHHHHHHHHHHHHHHHHHHhhcC--CCccc
Q 047983 77 AFFHSISLNMRMDDYLL----L-SESVYTTV-GAVPQILEKTE-----EEFFSKITDILREAADICCDRLKEI--PCITC 143 (233)
Q Consensus 77 ~~~~~~~~~~~~~~~~~----~-~~~~~~~~-~~~~~~l~~~~-----~~~~~~~~~~~~~~~~~l~~~L~~~--~~~~~ 143 (233)
..+.+.+. . .++|+... ..++.+|+... ..-++.+..++++.|..|+..|..+ ||-..
T Consensus 276 ---------~~v~SQl~lviR~~~SNPPAyGArIV~kvL~tP~lre~W~~sik~MssRI~~MR~aLrd~L~aL~TPGtWD 346 (410)
T KOG1412|consen 276 ---------AGVKSQLTLVIRSNWSNPPAYGARIVHKVLSTPELREQWIQSIKTMSSRIKKMRTALRDHLVALKTPGTWD 346 (410)
T ss_pred ---------HHHHHHHHHHHhhccCCCcchhhHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHH
Confidence 22222211 1 12333333 77888887652 2344556677777777777777665 23222
Q ss_pred ccCCCccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec-CHHHHHHHHHHH
Q 047983 144 PKKPEGSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV-EPSAFEIGLGRM 222 (233)
Q Consensus 144 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~-~~~~l~~~~~~l 222 (233)
.+.-+.|+|.+ ..+ ....+..+.+++.|.+.+-+ |++++. ...+++...+.|
T Consensus 347 HI~~QiGMFSy-----------TGL--------tp~qV~~li~~h~vyLl~~G--------RInisGLN~~NveyVAkAI 399 (410)
T KOG1412|consen 347 HITQQIGMFSY-----------TGL--------TPAQVDHLIENHKVYLLSDG--------RINISGLNMKNVEYVAKAI 399 (410)
T ss_pred HHHhhccceee-----------cCC--------CHHHHHHHHHhceEEEecCC--------cEeeeccccccHHHHHHHH
Confidence 24566799988 654 67788889999999998744 899987 788899999999
Q ss_pred HHHHHHHhh
Q 047983 223 KAFYYRHAK 231 (233)
Q Consensus 223 ~~~l~~~~~ 231 (233)
.+.++....
T Consensus 400 de~Vr~~~~ 408 (410)
T KOG1412|consen 400 DETVRAIKS 408 (410)
T ss_pred HHHHHhhcc
Confidence 988887653
No 238
>PRK12403 putative aminotransferase; Provisional
Probab=98.95 E-value=5.5e-08 Score=87.30 Aligned_cols=199 Identities=16% Similarity=0.163 Sum_probs=99.6
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCc-eEEEEEecCCCccccccchhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGW-RLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~-R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
+|.++|++||+++|.||+.+.|..+|... ....++-.+.++ +++|.++. |. .+|.+++++ ++.+. +. ..
T Consensus 247 ~lr~lc~~~g~lLI~DEV~tGfGRtG~~~-a~e~~gv~PDiv---~~gK~lgg-G~~Piga~v~~~--~i~~~--~~-~~ 316 (460)
T PRK12403 247 EIQRICRQYDVLLCADEVIGGFGRTGEWF-AHEHFGFEPDTL---SIAKGLTS-GYVPMGGLVLSK--RIAEA--LV-EQ 316 (460)
T ss_pred HHHHHHHHcCCEEEEeccccCCCcCchhh-hhhhcCCCCCeE---EEcccccc-cccceEEEEECH--HHHHH--Hh-cC
Confidence 68999999999999999999886666422 111122222233 58998554 74 999999876 33321 10 00
Q ss_pred hhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHH-HHHHHHH-HHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecC
Q 047983 81 SISLNMRMDDYLLLSESVYTTVGAVPQILEKTEE-EFFSKIT-DILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGS 158 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~-~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~ 158 (233)
...+....+++.++...+++++.+ +.-.+ +.+++.+ +.-+.-++.+.+..++.+.+.. .... |.++.
T Consensus 317 ----~~~~~~~~T~~gnPl~~Aaala~L-~~i~~~~l~~~~~~~~g~~l~~~L~~l~~~~~~i~~-vrG~-Gl~~g---- 385 (460)
T PRK12403 317 ----GGVFAHGLTYSGHPVAAAVAIANL-KALRDEGVVTRVKDDTGPYLQRCLREVFGDHPLVGE-VQGA-GLVAA---- 385 (460)
T ss_pred ----CCccccCCCCCCCHHHHHHHHHHH-HHHHhccHHHHHHHHHHHHHHHHHHHHHhcCCCEEe-Eeec-ceEEE----
Confidence 000001112222222222334433 21111 2223332 1222222223233233432221 3333 44444
Q ss_pred CCccccccccc--ccCCCCC---hHHHHHHHHhccCEEEECCcccCCCCcEEEEeec--CHHHHHHHHHHHHHHHHHHhh
Q 047983 159 EDKCLLKLNYS--LLEGINS---DTEFALKLAKEESIIVLPGITVGLKDWLRITFAV--EPSAFEIGLGRMKAFYYRHAK 231 (233)
Q Consensus 159 ~~~~~~~~~~~--~~~~~~~---~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~--~~~~l~~~~~~l~~~l~~~~~ 231 (233)
+.+... ....... ....+...+.++||.+.+.. +.+|++..- ++++++++++.+.+++++..+
T Consensus 386 -----ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~-----~~~~l~Ppl~it~~eid~~~~~l~~al~~~~~ 455 (460)
T PRK12403 386 -----LQFAEDKATRKRFANENDLAWRCRTIGFEEGVIIRSTL-----GRMIMAPALVAGRAEIDELVDKTRIAVDRTAR 455 (460)
T ss_pred -----EEEccCccccccccchhHHHHHHHHHHHhCCEEEEecC-----CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 222110 0000000 11223444567899998632 357776664 899999999999999988753
No 239
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=98.95 E-value=3.7e-08 Score=88.37 Aligned_cols=192 Identities=15% Similarity=0.122 Sum_probs=101.7
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCcc-ccccccCCccCEEEEccCccccCCCC-ceEEEEEecCCCccccccchhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHF-VPMGVFGSIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G-~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
+|.++|++||+++|.||+.+.|..+|... .....+.+ .++ +++|..+. | +.+|.+++++ ++.+ ..
T Consensus 253 ~lr~lc~~~g~llI~DEV~tG~GRtG~~fa~e~~gv~P--Div---~~gKgl~g-G~~P~~av~~~~--~i~~---~~-- 319 (459)
T PRK06082 253 RVREICDKHNVLLIIDEIPNGMGRTGEWFTHQAYGIEP--DIL---CIGKGLGG-GLVPIAAMITKD--KYNT---AA-- 319 (459)
T ss_pred HHHHHHHHcCCEEEEechhhCCCccchhhHhHhhCCCC--CEE---EecccccC-CCCcceEEEEcH--HHHh---hc--
Confidence 68999999999999999999886665321 11122223 233 48999664 5 6999999987 2221 11
Q ss_pred hhhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhc----CCCcccccCCCccEEEEE
Q 047983 80 HSISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKE----IPCITCPKKPEGSMFVMY 155 (233)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~~~~~~g~~~~~ 155 (233)
.......+++.++...+++++.+ +.-.+ ....+..+++-+++.+.|++ .+.+.. ....|.+ +.
T Consensus 320 ------~~~~~~~T~~gnpl~~aaa~a~L-~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~-vrG~Gl~-~~- 386 (459)
T PRK06082 320 ------QISLGHYTHEKSPLGCAAALATI-EVIEQ---EGLLEKVKADSQFMRERLLEMKAKYPLIGD-VRGIGLL-WG- 386 (459)
T ss_pred ------cCCCCCCCCCcCHHHHHHHHHHH-HHHHh---cCHHHHHHHHHHHHHHHHHHHHhhCCCeee-eeeccce-eE-
Confidence 10001122332222222333333 11111 12333344444444444433 332221 3344443 44
Q ss_pred ecCCCccccccccc--ccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEee--cCHHHHHHHHHHHHHHHHHHhh
Q 047983 156 CGSEDKCLLKLNYS--LLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFA--VEPSAFEIGLGRMKAFYYRHAK 231 (233)
Q Consensus 156 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~--~~~~~l~~~~~~l~~~l~~~~~ 231 (233)
+.+... ......+....+...+.++||.+.|.. .+.+|++.. .++++++++++++.+.+.+..+
T Consensus 387 --------ve~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~----~~~i~~~Ppl~it~~eid~~~~~l~~~l~~~~~ 454 (459)
T PRK06082 387 --------VELVTDRHTKERAYDEAEAVLYRCLNNGLSFKVSQ----GNVIQLSPPLIITREELTQALAILEEAIAKICQ 454 (459)
T ss_pred --------EEEccCccccCccHHHHHHHHHHHHhCCCEEEecC----CCEEEEeCCCccCHHHHHHHHHHHHHHHHHHhh
Confidence 222110 000000112334445558899998731 377888754 4899999999999999987643
No 240
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=98.94 E-value=8.9e-08 Score=84.49 Aligned_cols=193 Identities=12% Similarity=0.056 Sum_probs=110.3
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|.++|+++|+++++|++++. +..+..+... .--+++.|..|.++.+| +|++++++. ....+... .+
T Consensus 162 ~~I~~l~~~~g~~livD~a~a~----g~~~~~~~~~---~~D~~~~s~~K~~gp~G--~G~l~~~~~--~~~~~~~~-~~ 229 (402)
T TIGR02006 162 AAIGEICRERKVFFHVDAAQSV----GKIPINVNEL---KVDLMSISGHKIYGPKG--IGALYVRRK--PRVRLEAL-IH 229 (402)
T ss_pred HHHHHHHHHcCCEEEEEcchhc----CCcccCcccc---CCCEEEEehhhhcCCCc--eEEEEEccC--CCCCCCce-ec
Confidence 3789999999999999999875 2222222222 22377888889876556 899888863 21110100 00
Q ss_pred hhhhHHhhhhhhhhccCcch-HH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCC--ccEEEEEe
Q 047983 81 SISLNMRMDDYLLLSESVYT-TV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPE--GSMFVMYC 156 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~--~g~~~~~~ 156 (233)
. ....+ .+..++++ .. .++...++. ..+.++...+++++.++.+.+.|++++++.....+. ...-+.
T Consensus 230 g---~~~~~---~~~~gt~~~~~~~al~~al~~-~~~~~~~~~~~~~~l~~~l~~~l~~~~~v~~~~~~~~~~p~~~~-- 300 (402)
T TIGR02006 230 G---GGHER---GMRSGTLPTHQIVGMGEAFRI-AKEEMAQDTAHVLALRDRLLNGIKSIEEVYLNGDLEHRVPGNLN-- 300 (402)
T ss_pred C---CCccC---CccCCCccHHHHHHHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCeEE--
Confidence 0 00000 11112222 22 444333322 234567778889999999999998876654211111 000011
Q ss_pred cCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC-------------------CCcEEEEeec--CHHHH
Q 047983 157 GSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL-------------------KDWLRITFAV--EPSAF 215 (233)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~-------------------~~~~Rl~~~~--~~~~l 215 (233)
+.++. + +..+.. ..+ .+|.+..|..+.+ .+++|+|+.. +++++
T Consensus 301 -------v~f~~-----~-~~~~~~-~~l--~~i~v~~G~~c~~~~~~~~~~l~~lg~~~~~~~~~vR~S~~~~~t~edi 364 (402)
T TIGR02006 301 -------VSFNY-----V-EGESLI-MAL--KDLAVSSGSACTSASLEPSYVLRALGINDELAHSSIRFTIGRFTTEEEI 364 (402)
T ss_pred -------EEEeC-----c-CHHHHH-Hhc--CCEEEechhhcCCCCCCccHHHHHcCCChhhcCceEEEEecCCCCHHHH
Confidence 11221 1 123332 223 4888888776532 2689999996 89999
Q ss_pred HHHHHHHHHHHHHHh
Q 047983 216 EIGLGRMKAFYYRHA 230 (233)
Q Consensus 216 ~~~~~~l~~~l~~~~ 230 (233)
+.+++.|.+++++.+
T Consensus 365 d~l~~~l~~~~~~~~ 379 (402)
T TIGR02006 365 DYAVKLVKSAIDKLR 379 (402)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999887653
No 241
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=98.93 E-value=2.2e-08 Score=89.15 Aligned_cols=198 Identities=14% Similarity=0.059 Sum_probs=99.3
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCcc-ccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHF-VPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
+|.++|++||+++|.||++..| ..+... .....+.++ +-+++|..+ .|+++|.+++++ ++.+. +.
T Consensus 225 ~l~~lc~~~g~llI~DEV~tG~-Rt~~~~a~~~~gv~PD-----ivt~gK~lg-gG~Pi~av~~~~--~i~~~--~~--- 290 (428)
T PRK12389 225 AVNELAHEAGALVIYDEVITAF-RFMYGGAQDLLGVEPD-----LTALGKIIG-GGLPIGAYGGRK--DIMEQ--VA--- 290 (428)
T ss_pred HHHHHHHHcCCEEEEEcccccc-ccCcchhhHHhCCCCC-----eeeechhhc-CCCceeEEeEHH--HHHhh--hc---
Confidence 6899999999999999999988 433211 111222232 348899954 589999999887 34421 10
Q ss_pred hhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhc----CCCcccccCCCccEEEEEe
Q 047983 81 SISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKE----IPCITCPKKPEGSMFVMYC 156 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~~~~~~g~~~~~~ 156 (233)
. ........+++.++...+++++.+ +.-.++ ...+.++++-+++.+.|++ .+........ +|++...+
T Consensus 291 ~---~~~~~~~~T~~gnpl~~Aaala~L-~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~~~v~r~-~g~~gi~~ 362 (428)
T PRK12389 291 P---LGPAYQAGTMAGNPASMAAGIACL-EVLQQE---GVYEKLDRLGAMLEEGILEAAEKHGITITINRL-KGALTVYF 362 (428)
T ss_pred c---CCCcccccCCccCHHHHHHHHHHH-HHHhcc---cHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEec-CcEEEEEE
Confidence 0 000111122332233322333333 211111 1233334444444444433 3322111122 33433211
Q ss_pred cCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeecCHHHHHHHHHHHHHHHHH
Q 047983 157 GSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAVEPSAFEIGLGRMKAFYYR 228 (233)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~~~~~l~~~~~~l~~~l~~ 228 (233)
.+........ .. ....+....+.+.+.++||.+.|.. .+.+.+++..++++++++++.+.+.+++
T Consensus 363 ~~~~~~~~~~--~~-~~~~~~~~~~~~~l~~~Gv~~~~~~----~~~~~~~l~~t~e~id~~~~~l~~~l~~ 427 (428)
T PRK12389 363 TDEKVTNYDQ--AE-RSDGEAFGKFFKLMLNQGINLAPSK----YEAWFLTTAHTEEDIEETLEAVDRAFAQ 427 (428)
T ss_pred eCCCCCChhh--hc-ccCHHHHHHHHHHHHHCCcEeecCC----CCCeeecCCCCHHHHHHHHHHHHHHHHh
Confidence 1110000000 00 0000113455566668899998842 1234577777999999999999998864
No 242
>PRK06062 hypothetical protein; Provisional
Probab=98.93 E-value=3.8e-08 Score=88.13 Aligned_cols=203 Identities=17% Similarity=0.096 Sum_probs=100.6
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCcc-ccccccCCccCEEEEccCccccCCCC-ceEEEEEecCCCccccccchhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHF-VPMGVFGSIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G-~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
+|.++|++||+++|.||++..|...|... .....+.++ +.+++|.++ .| +++|.+++++ ++.+. +.
T Consensus 239 ~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~~~~gv~PD-----i~t~gK~lg-gG~~Pigav~~~~--~i~~~--~~-- 306 (451)
T PRK06062 239 GVRELCDRHGIVLIADEVMAGFGRTGKWFAIEHFGVVPD-----LITFAKGVN-SGYVPLGGVAISE--AIAAT--FA-- 306 (451)
T ss_pred HHHHHHHHcCCEEEeeccccCCCcCcHHHHHHhcCCCCC-----eeeechhhh-cCCcCcEEEEEcH--HHHHH--hc--
Confidence 68899999999999999999975555321 111223332 558899855 47 4999999987 34421 10
Q ss_pred hhhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHH--HHHHHHHHHhhcCCCcccccCCCccEEEEEec
Q 047983 80 HSISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILR--EAADICCDRLKEIPCITCPKKPEGSMFVMYCG 157 (233)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~ 157 (233)
. ..+....+++.++...+++++.+ +.-.++.+.+..+.+. .-++.|.+..++.+.+.. ....|.++..-+-
T Consensus 307 --~---~~~~~~~T~~gnpl~~Aaa~a~L-~~l~~~~l~~~~~~~G~~~l~~~L~~l~~~~~~v~~-vrG~Gl~~gve~~ 379 (451)
T PRK06062 307 --D---RPYPGGLTYSGHPLACAAAVATI-NAMEEEGIVENAARIGAEVLGPGLRELAERHPSVGE-VRGLGVFWALELV 379 (451)
T ss_pred --c---CCCCCCCCCCCCHHHHHHHHHHH-HHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcEEe-EeccccEEEEEEc
Confidence 0 01111123333322222444433 2111111111111221 112222222222332222 3344443332111
Q ss_pred CCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEee--cCHHHHHHHHHHHHHHHHHHh
Q 047983 158 SEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFA--VEPSAFEIGLGRMKAFYYRHA 230 (233)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~--~~~~~l~~~~~~l~~~l~~~~ 230 (233)
+++...-.++.... + ......+...+.++||.+.+. .+.+|++.. .++++++++++++.+++++.+
T Consensus 380 ~~~~~~~~~~~~~~-~-~~~~~~~~~~l~~~Gvl~~~~-----~~~lrl~ppl~~t~~eid~~~~~l~~~l~~~~ 447 (451)
T PRK06062 380 ADRETREPLAPYGA-S-SAAMAAVKAACKERGLLPFVN-----GNRIHVVPPCTVTEDEVREGLAILDAALAVAD 447 (451)
T ss_pred ccccccCCCcccch-h-hHHHHHHHHHHHHCCcEEeec-----CCEEEEECCccCCHHHHHHHHHHHHHHHHHhh
Confidence 11110000000000 0 002345556667889998752 257888664 489999999999999998764
No 243
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.93 E-value=4.5e-08 Score=88.01 Aligned_cols=199 Identities=14% Similarity=0.093 Sum_probs=103.4
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCC-ceEEEEEecCCCccccccchhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++.++|++||+++|.||+...|..+|.-. .....+-.+. +-+++|..+ .| +++|.+++++ ++.+. +. ..
T Consensus 262 ~lr~lc~~~gillI~DEV~TGfGRtG~~~-a~e~~gv~PD---iv~~gKgl~-gG~~Plaav~~~~--ei~~~--~~-~~ 331 (472)
T PRK08742 262 RARELCDAHGAFLIADEIATGFGRTGTLF-ACEQAGVMPD---LLCLSKGLT-GGFLPLSAVLATQ--QLYDA--FL-DD 331 (472)
T ss_pred HHHHHHHHcCCEEEEechhhCCCCCccch-HHHhcCCCCC---EEEEccccc-CCCCCcceeeccH--HHHHH--hh-cc
Confidence 68899999999999999999987766321 1111222222 446699854 47 4999999987 34321 10 00
Q ss_pred hhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCCC
Q 047983 81 SISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSED 160 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~ 160 (233)
.. ...+....+++.++...+++.+.+ +.-.++.+.+..+.+.++...+.+.+++.+.+.. .... |.++-
T Consensus 332 ~~--~~~~~h~~T~~gnpl~~Aaa~a~L-~~i~~~~l~~~~~~~g~~l~~~~~~~~~~~~i~d-vRG~-Gl~~g------ 400 (472)
T PRK08742 332 SR--ERAFLHSHSYTGNPLACAAALATL-DIFADDDVIARNQPTAARMTQLAAQIGEHPHVAD-VRQA-GMVVA------ 400 (472)
T ss_pred Cc--cCccCcCCCCCccHHHHHHHHHHH-HHHHHCCHHHHHHHHHHHHHHHHHHHhcCCCeee-Eecc-ceEEE------
Confidence 00 000011122322222222333332 2212222223333333333344444544543322 3343 44444
Q ss_pred ccccccccccc--CCCCCh---HHHHHHHHhccCEEEECCcccCCCCcEEEEee--cCHHHHHHHHHHHHHHHHHH
Q 047983 161 KCLLKLNYSLL--EGINSD---TEFALKLAKEESIIVLPGITVGLKDWLRITFA--VEPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 161 ~~~~~~~~~~~--~~~~~~---~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~--~~~~~l~~~~~~l~~~l~~~ 229 (233)
+.+..... .....+ ...+.+.+.++||.+.+. + +.+|+... .+++++++++++|.+.+++.
T Consensus 401 ---iel~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~---g--~vi~~~PpL~it~~ei~~~~~~l~~~l~~~ 468 (472)
T PRK08742 401 ---FELTRGGNKRTPFPPAARVGLHAYRAALARGVVLRPL---G--DVLYWMPPYCVDEAQLALLADTTRHAIDEA 468 (472)
T ss_pred ---EEeccCccccccCCchhHHHHHHHHHHHHCCeEEEec---C--CEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 22211100 000001 234455566889999873 2 57888665 38999999999999999875
No 244
>PRK06234 methionine gamma-lyase; Provisional
Probab=98.93 E-value=2.8e-08 Score=87.65 Aligned_cols=58 Identities=16% Similarity=0.201 Sum_probs=45.8
Q ss_pred ChHHHHHHHc--CcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceE-EEEEecC
Q 047983 1 FCIEETTKKL--GIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRL-GWLVTSD 66 (233)
Q Consensus 1 ~~i~~l~~~~--~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~-G~~~~~~ 66 (233)
++|.++|+++ |+++|+||+|....+.. ++ .. ...|++.|+||.++++|+|+ ||+++++
T Consensus 169 ~~I~~la~~~~~~i~livDea~~~~~~~~----~l-~~---g~Divv~S~sK~l~g~g~~~gG~v~~~~ 229 (400)
T PRK06234 169 KAISNIAHENNKECLVFVDNTFCTPYIQR----PL-QL---GADVVVHSATKYLNGHGDVIAGFVVGKE 229 (400)
T ss_pred HHHHHHHHhcCCCCEEEEECCCCchhcCC----ch-hh---CCcEEEeeccccccCCCCceeEEEEecH
Confidence 3789999997 99999999999765431 22 11 33489999999999999876 9999887
No 245
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.92 E-value=4.2e-08 Score=87.84 Aligned_cols=195 Identities=12% Similarity=0.090 Sum_probs=101.2
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCC-ceEEEEEecCCCccccccchhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
+|.++|++||+++|.||+...|..+|.-+ .....+-.+. +-+++|..+ .| +++|.+++++ ++.+. +..
T Consensus 247 ~lr~lc~~~gillI~DEV~TG~GRtG~~f-a~~~~gv~PD---ivt~gKgl~-gG~~Pi~av~~~~--ei~~~--~~~-- 315 (453)
T PRK06943 247 GLRALCDRYGVHLIADEIAVGCGRTGTFF-ACEQAGVWPD---FLCLSKGIS-GGYLPLSLVLSRD--AIFAA--FYD-- 315 (453)
T ss_pred HHHHHHHHcCCEEEeechhhCCCCCcchh-HHHhCCCCCC---eEeeehhhc-cCcccceEEEEcH--HHHHh--hcc--
Confidence 68899999999999999999986665321 1111222222 446699855 58 5999999987 44421 100
Q ss_pred hhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHH-HHHHHHHHHHHHHHHHHHHHhh---cCCCcccccCCCccEEEEEe
Q 047983 81 SISLNMRMDDYLLLSESVYTTVGAVPQILEKTEE-EFFSKITDILREAADICCDRLK---EIPCITCPKKPEGSMFVMYC 156 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~L~---~~~~~~~~~~~~~g~~~~~~ 156 (233)
......+....+++.++...+++++.+ +.-.+ +.+++ .++.-+++.+.|+ +.+.+.. .... |.++-
T Consensus 316 -~~~~~~~~~~~T~~gnpl~~aaa~a~L-~~i~~~~l~~~----~~~~G~~l~~~L~~l~~~~~v~~-vrG~-Gl~~g-- 385 (453)
T PRK06943 316 -DDVTRGFLHSHSYTGNPLACRAALATL-DLFAEDDVLAR----NARKSARLRAALAPLAAHPQVRH-LRQR-GTIFA-- 385 (453)
T ss_pred -cCccCCccCCCCCCCCHHHHHHHHHHH-HHHHhcCHHHH----HHHHHHHHHHHHHHHhcCCCEEe-Eecc-ccEEE--
Confidence 000000111122322222322333333 21111 22222 2222333333332 2333321 2333 44444
Q ss_pred cCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEE--eecCHHHHHHHHHHHHHHHHHHh
Q 047983 157 GSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRIT--FAVEPSAFEIGLGRMKAFYYRHA 230 (233)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~--~~~~~~~l~~~~~~l~~~l~~~~ 230 (233)
+.+.... .........+.+.+.++||.+.|.. +.+|++ +..+++++++++++|.+.+++..
T Consensus 386 -------vel~~~~-~~~~~~~~~i~~~~~~~Gll~~~~g-----~~l~~~Ppl~it~~eid~~~~~l~~al~~~~ 448 (453)
T PRK06943 386 -------FDVALDG-DAARTFSRRFFEAALERELLLRPIG-----TTVYLMPPYVLDDDEIAWLAERTRATLDATL 448 (453)
T ss_pred -------EEEccCC-CcchHHHHHHHHHHHHCCcEEEecC-----CEEEEeCCCcCCHHHHHHHHHHHHHHHHHHH
Confidence 3332110 0000112344555668899997742 458887 55699999999999999998763
No 246
>PRK07481 hypothetical protein; Provisional
Probab=98.92 E-value=4.5e-08 Score=87.60 Aligned_cols=196 Identities=14% Similarity=0.117 Sum_probs=99.2
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCcc-ccccccCCccCEEEEccCccccCCCC-ceEEEEEecCCCccccccchhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHF-VPMGVFGSIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G-~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
+|.++|++||+++|.||+...|..+|... .....+.++ +-+++|..+ .| +++|.+++++ ++.+. +. .
T Consensus 238 ~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PD-----iv~~gKgl~-gG~~Pi~av~~~~--~i~~~--~~-~ 306 (449)
T PRK07481 238 LVREVCDRHGILLIADEVVTGFGRTGSWFGSRGWGVKPD-----IMCLAKGIT-SGYVPLGATMVNA--RIADA--FE-A 306 (449)
T ss_pred HHHHHHHHcCCEEEEeehhhCcCcCchhhHhhhcCCCCC-----EEEEeeccc-CCCcCceEEEEcH--HHHHH--Hh-c
Confidence 68899999999999999999986665321 112222332 446799844 46 5999999987 34321 10 0
Q ss_pred hhhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhc----CCCcccccCCCccEEEEE
Q 047983 80 HSISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKE----IPCITCPKKPEGSMFVMY 155 (233)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~~~~~~g~~~~~ 155 (233)
. ......+.+..+++.++...+++.+.+ +.-.++ ...+..++.-+++.+.|++ .+.+.. .... |.++.
T Consensus 307 ~-~~~~~~~~h~~T~~gnpl~~aaa~a~L-~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i~~-vrG~-Glm~g- 378 (449)
T PRK07481 307 N-ADFGGAIMHGYTYSGHPVACAAALATL-DIVVRE---DLPANAAKRGAYLLEGLQPLKERFELVGD-VRGK-GLMLA- 378 (449)
T ss_pred c-CccccccccCCCCCCCHHHHHHHHHHH-HHHHhh---hHHHHHHHHHHHHHHHHHHHhhcCCCeEE-Eeec-ceEEE-
Confidence 0 000000111123333333322333332 211111 1222222233333333332 332221 2333 44444
Q ss_pred ecCCCcccccccccc--cCCCC---ChHHHHHHHHhccCEEEECCcccCCCCcEEEEee--cCHHHHHHHHHHHHHHHHH
Q 047983 156 CGSEDKCLLKLNYSL--LEGIN---SDTEFALKLAKEESIIVLPGITVGLKDWLRITFA--VEPSAFEIGLGRMKAFYYR 228 (233)
Q Consensus 156 ~~~~~~~~~~~~~~~--~~~~~---~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~--~~~~~l~~~~~~l~~~l~~ 228 (233)
+.+.... ..... .....+...+.++||.+.|.. +.+|++.. .++++++++++.+.+.+++
T Consensus 379 --------i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~g-----~~i~l~Ppl~it~~eid~~~~~l~~~l~~ 445 (449)
T PRK07481 379 --------LDLVADKATREPIDPSKGYANAVADVARENGVLVRPSG-----TKIILSPPLVIQREDVDRIVDALDAGLSA 445 (449)
T ss_pred --------EEecccccccCCCCchhHHHHHHHHHHHhCCeEEEecC-----CEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 2221110 00000 112344555667899998742 35788744 4899999999999999976
Q ss_pred H
Q 047983 229 H 229 (233)
Q Consensus 229 ~ 229 (233)
.
T Consensus 446 ~ 446 (449)
T PRK07481 446 V 446 (449)
T ss_pred c
Confidence 5
No 247
>PRK07483 hypothetical protein; Provisional
Probab=98.92 E-value=5.6e-08 Score=86.86 Aligned_cols=202 Identities=15% Similarity=0.133 Sum_probs=101.5
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCcc-ccccccCCccCEEEEccCccccCCCCc-eEEEEEecCCCccccccchhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHF-VPMGVFGSIVPVLTLGSISKRWIVPGW-RLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~-R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
+|.++|++||+++|.||+...|..+|.-. .....+.++ +-+++|.. ..|+ ++|.+++++ ++.+. +.
T Consensus 225 ~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PD-----iv~~gK~l-~gG~~Pi~av~~~~--~i~~~--~~-- 292 (443)
T PRK07483 225 RIREVCDRYGVLLILDEVMCGMGRTGTLFACEEDGVAPD-----LVTIAKGL-GAGYQPIGAVLASD--RIYDA--IA-- 292 (443)
T ss_pred HHHHHHHHhCCEEEEecceeCcccCcHHHHHhhcCCCCC-----eeeehhhh-ccCccccEEEEEcH--HHHHH--Hh--
Confidence 68899999999999999999986665321 111122232 44679984 4585 999999987 34321 10
Q ss_pred hhhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHH-HHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecC
Q 047983 80 HSISLNMRMDDYLLLSESVYTTVGAVPQILEKTEE-EFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGS 158 (233)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~ 158 (233)
.+ ...+.+..+++.++...+++++.+ +.-.+ +..++.++.=..-++.|.+.+++.+.+.. ....|.++ -
T Consensus 293 --~~-~~~~~h~~T~~gnpl~~aaa~a~l-~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~-vRG~Glm~-g---- 362 (443)
T PRK07483 293 --DG-SGFFQHGHTYLGHATACAAALAVQ-RVIAEDGLLANVRARGEQLRARLRERLGQHPHVGD-IRGRGLFV-G---- 362 (443)
T ss_pred --cC-CCccccCCCCCCCHHHHHHHHHHH-HHHHhcCHHHHHHHHHHHHHHHHHHHHhcCCCeee-EeecccEE-E----
Confidence 00 000011122332233322333332 21111 22222222222222222222333432222 33444333 3
Q ss_pred CCcccccccccc--cCCCC---ChHHHHHHHHhccCEEEECCcc-c-CC-CCcEEEEee--cCHHHHHHHHHHHHHHHHH
Q 047983 159 EDKCLLKLNYSL--LEGIN---SDTEFALKLAKEESIIVLPGIT-V-GL-KDWLRITFA--VEPSAFEIGLGRMKAFYYR 228 (233)
Q Consensus 159 ~~~~~~~~~~~~--~~~~~---~~~~~~~~ll~~~gi~v~pg~~-f-~~-~~~~Rl~~~--~~~~~l~~~~~~l~~~l~~ 228 (233)
+.+..+. ..... .....+.+.+.++||.+.|... . +. .+.+|+.-. .+++++++++++|.+.+.+
T Consensus 363 -----ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~~~~~~~~~~~l~~~PpL~it~~eid~~~~~l~~~l~~ 437 (443)
T PRK07483 363 -----VELVADRATKAPFDPALKLHARIKREAMARGLMVYPMGGTIDGVRGDHVLLAPPFIITAAQIDEIVERLGDAIDA 437 (443)
T ss_pred -----EEEeecccccCCCCchhhHHHHHHHHHHHCCcEEEecCccccCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 2221100 00000 1124455566688999987421 1 11 367888554 4999999999999999987
Q ss_pred Hh
Q 047983 229 HA 230 (233)
Q Consensus 229 ~~ 230 (233)
..
T Consensus 438 ~~ 439 (443)
T PRK07483 438 AL 439 (443)
T ss_pred HH
Confidence 54
No 248
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.92 E-value=5e-08 Score=86.65 Aligned_cols=189 Identities=13% Similarity=0.080 Sum_probs=98.2
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCC-ceEEEEEecCCCccccccchhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
+|.++|++||+++|.||++..+..+|.-. .....+-.+.++ +++|.++ .| ..+|.+++++ ++.+. +.
T Consensus 226 ~lr~lc~~~g~llI~DEv~tG~GrtG~~~-a~~~~gv~PDi~---t~gK~l~-gG~~p~~av~~~~--~i~~~--~~--- 293 (422)
T PRK05630 226 GVRTLCDKHDILLIADEIATGFGRTGELF-ATLAAGVTPDIM---CVGKALT-GGFMSFAATLCTD--KVAQL--IS--- 293 (422)
T ss_pred HHHHHHHHcCCEEEEecceeCCCcCchhh-HHHhcCCCCCee---eeechhh-cCccccceeeccH--HHHHH--Hh---
Confidence 68899999999999999999885555321 111112212223 8899753 36 5889999987 33321 10
Q ss_pred hhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhc---CCCcccccCCCccEEEEEec
Q 047983 81 SISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKE---IPCITCPKKPEGSMFVMYCG 157 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~---~~~~~~~~~~~~g~~~~~~~ 157 (233)
.......+....+++.++...+++.+.+ +.-.++ ..++.++++-+++.+.|+. .+.+.. .... |.++-
T Consensus 294 ~~~~~~~~~h~~T~~g~Pla~aaa~aaL-~~l~~~---~~~~~~~~~g~~l~~~L~~l~~~~~v~~-vRg~-Gl~~~--- 364 (422)
T PRK05630 294 TPNGGGALMHGPTFMANPLACAVAHASL-EIIETG---MWRKQVKRIEAELIAGLSPLAHLPGVAD-VRVL-GAIGV--- 364 (422)
T ss_pred ccCCCCccccCCCCcCCHHHHHHHHHHH-HHHHhC---cHHHHHHHHHHHHHHHHHHhhcCCCeee-eecc-ccEEE---
Confidence 0000000111122322222222333332 111111 1223333444444444433 222211 2222 44444
Q ss_pred CCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEee--cCHHHHHHHHHHHHHHHHH
Q 047983 158 SEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFA--VEPSAFEIGLGRMKAFYYR 228 (233)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~--~~~~~l~~~~~~l~~~l~~ 228 (233)
+.+..+ .+...+...+.++||.+.+. + +.+|+... .+++++++++++|.++++.
T Consensus 365 ------ie~~~~------~~~~~~~~~~~~~Gl~~~~~---g--~~l~~~PpL~it~~~i~~~~~~l~~al~~ 420 (422)
T PRK05630 365 ------VEMEQP------VDMEEATQAAVDHGVWLRPF---G--RLVYVMPPYITTSEQIAQICAALAAAVKA 420 (422)
T ss_pred ------EEECCc------ccHHHHHHHHHHCCeEEEec---C--CEEEEECCccCCHHHHHHHHHHHHHHHhc
Confidence 333211 12345555666889999763 2 57787655 4899999999999998864
No 249
>PRK07482 hypothetical protein; Provisional
Probab=98.91 E-value=7e-08 Score=86.63 Aligned_cols=201 Identities=15% Similarity=0.093 Sum_probs=100.8
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCc-eEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGW-RLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~-R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|.++|++||+++|.||+...|..+|..+ .....+-.+. +-+++|..+ .|. ++|.+++++ ++.+.+..-
T Consensus 244 ~~lr~lc~~~giLlI~DEV~tGfGRtG~~~-a~~~~gv~PD---iv~~gKgl~-gG~~Pi~av~~~~--~i~~~~~~~-- 314 (461)
T PRK07482 244 PAIQAVLKKYDILLIADEVVTGFGRLGSMF-GSDHYGIEPD---LITVAKGLT-SAYAPLSGSIVGE--KVWDVLEQG-- 314 (461)
T ss_pred HHHHHHHHHhCCEEEEeccccCCCcCcchh-hHHhcCCCCC---EEEEccccc-cCccccceeeecH--HHHHHHhcc--
Confidence 368999999999999999999997666422 1111222222 335799844 464 899999887 333210000
Q ss_pred hhhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHh----hcCCCcccccCCCccEEEEE
Q 047983 80 HSISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRL----KEIPCITCPKKPEGSMFVMY 155 (233)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L----~~~~~~~~~~~~~~g~~~~~ 155 (233)
......+....+++.++.+.+++++.+ +.-.++ ...+..++.-+++.+.| ++.+.+.. .... |.++.
T Consensus 315 --~~~~~~~~h~~T~~gnpl~~Aaa~a~L-~~~~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~v~~-vrG~-Glm~g- 385 (461)
T PRK07482 315 --SDEHGAIGHGWTYSGHPICAAAALANL-DILERE---NLVGNAAEVGAYFRARLRAAFGDHPLVGE-VRGV-GMLAA- 385 (461)
T ss_pred --cccCCccccCCCCCcCHHHHHHHHHHH-HHHHhC---CHHHHHHHHHHHHHHHHHHHHhcCCCEEE-Eeec-eeEEE-
Confidence 000000111122333333322334433 111111 12222233333333333 33433221 2333 44444
Q ss_pred ecCCCcccccccccc--cCCCCCh---HHHHHHHHhccCEEEECCcccCCCCcEEEE--eecCHHHHHHHHHHHHHHHHH
Q 047983 156 CGSEDKCLLKLNYSL--LEGINSD---TEFALKLAKEESIIVLPGITVGLKDWLRIT--FAVEPSAFEIGLGRMKAFYYR 228 (233)
Q Consensus 156 ~~~~~~~~~~~~~~~--~~~~~~~---~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~--~~~~~~~l~~~~~~l~~~l~~ 228 (233)
+.+.... ..+...+ ...+...+.++||.+.++. ..+.+|+. +..++++++++++.+.+.+++
T Consensus 386 --------iel~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~~---~~~~i~~~Ppl~it~~ei~~~~~~l~~~l~~ 454 (461)
T PRK07482 386 --------VEFVADRDDRTPFDPALKIGPQVSAAALERGVIARAMP---HGDILGFAPPLVLTRAEADEIVAIAKDAVDE 454 (461)
T ss_pred --------EEeccCCCcCCCCChhhHHHHHHHHHHHHCCcEEecCC---CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 2231100 0000001 2344555668899986532 12568875 445999999999999999987
Q ss_pred Hh
Q 047983 229 HA 230 (233)
Q Consensus 229 ~~ 230 (233)
..
T Consensus 455 ~~ 456 (461)
T PRK07482 455 VL 456 (461)
T ss_pred HH
Confidence 53
No 250
>PRK06148 hypothetical protein; Provisional
Probab=98.91 E-value=2.9e-08 Score=96.71 Aligned_cols=195 Identities=15% Similarity=0.124 Sum_probs=103.2
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHS 81 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~ 81 (233)
++.++|++||+++|.||+...|...|.........+- .--|-+++|..+ .|+++|.+++++ ++.+. +.
T Consensus 809 ~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~e~~gv---~PDivt~gK~lg-gG~Plgav~~~~--ei~~~--~~---- 876 (1013)
T PRK06148 809 EVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQGV---VPDIVTMGKPIG-NGHPMGAVVTTR--EIADS--FD---- 876 (1013)
T ss_pred HHHHHHHHhCCEEEEEecccCCCCCCCcchhhhhcCC---Ccceeeeccccc-CCcceEEEEEcH--HHHhh--cc----
Confidence 6889999999999999999998666642211211121 122567899954 589999999987 34321 11
Q ss_pred hhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhc----CCCcccccCCCccEEEEEec
Q 047983 82 ISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKE----IPCITCPKKPEGSMFVMYCG 157 (233)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~~~~~~g~~~~~~~ 157 (233)
.......+++.++.+.+++++.+ +.-.++ ...+..++.-+++.+.|++ .+.+.. +... |.++-
T Consensus 877 ----~g~~~~~Tf~gnpla~aaa~a~L-~~i~~e---~l~~~~~~~G~~l~~~L~~l~~~~~~i~~-VrG~-Gl~~g--- 943 (1013)
T PRK06148 877 ----NGMEYFNTFGGNPVSCAIGLAVL-DIIEDE---DLQRNALEIGNYLLAGLRELQDRFDIIGD-VRGM-GLFLG--- 943 (1013)
T ss_pred ----CCCccccCCCCCHHHHHHHHHHH-HHHhhc---cHHHHHHHHHHHHHHHHHHHHHhCCCceE-Eeee-ceEEE---
Confidence 11111123333333322333332 211111 1222223333333333322 332221 2333 44444
Q ss_pred CCCcccccccccc--cCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEee--cCHHHHHHHHHHHHHHHHHH
Q 047983 158 SEDKCLLKLNYSL--LEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFA--VEPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 158 ~~~~~~~~~~~~~--~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~--~~~~~l~~~~~~l~~~l~~~ 229 (233)
+.+.... .....+....+...+.++||.+.+.... .+.+|+... .++++++++++.|.+++++.
T Consensus 944 ------vel~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g~~--~~vlr~~Ppl~it~~~id~~l~~l~~~l~~~ 1011 (1013)
T PRK06148 944 ------IELVTDRKTKAPATAIARYVKNGARERGILIGTEGPH--DNVLKIRPPLIFSRADADHLLEVLDDVLAAA 1011 (1013)
T ss_pred ------EEecCCccccCccHHHHHHHHHHHHhCCeEEeccCCC--CCEEEEeCCccCCHHHHHHHHHHHHHHHHHH
Confidence 2221110 0000012344555566789999874322 367777555 59999999999999999764
No 251
>PRK06149 hypothetical protein; Provisional
Probab=98.91 E-value=6.9e-08 Score=93.89 Aligned_cols=190 Identities=18% Similarity=0.165 Sum_probs=101.5
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHS 81 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~ 81 (233)
+|.++|++||+++|.||+...|...|.....+...+-... +-+++|..+ .|+.+|.+++++ ++.+
T Consensus 769 ~l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv~PD---ivt~gK~lg-~G~Pl~av~~~~--~i~~--------- 833 (972)
T PRK06149 769 QVYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGVVPD---IITMAKGMG-NGHPLGAVITRR--EIAE--------- 833 (972)
T ss_pred HHHHHHHHcCCEEEEEeehhcCCccCccchhhhhcCCCCC---EEEeccccc-CCeeeEEEEEcH--HHHh---------
Confidence 6889999999999999999988666542222221222222 338899955 589999999987 3432
Q ss_pred hhhHHhhhh--hhhhccCcchHH--HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhc----CCCcccccCCCccEEE
Q 047983 82 ISLNMRMDD--YLLLSESVYTTV--GAVPQILEKTEEEFFSKITDILREAADICCDRLKE----IPCITCPKKPEGSMFV 153 (233)
Q Consensus 82 ~~~~~~~~~--~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~~~~~~g~~~ 153 (233)
.+.. ....+.+.++.. ++++.+ +.-.++ .+.+..++.-+++.+.|++ .+.+.. .... |.++
T Consensus 834 -----~~~~~~~~~sT~~gnP~~~aaala~L-~~i~~e---~l~~~~~~~G~~l~~~L~~l~~~~~~i~~-vrG~-Gl~~ 902 (972)
T PRK06149 834 -----ALEAEGYFFSSTGGSPVSCRIGMAVL-DVLREE---KLQENARRVGDHLKARLEALADRHPLIGA-VHGM-GLYL 902 (972)
T ss_pred -----hhccCCcccCCCCCCHHHHHHHHHHH-HHHHhc---CHHHHHHHHHHHHHHHHHHHHHhCCCeEE-Eeec-ceEE
Confidence 2211 111122333333 334433 211111 1222222222333333322 332222 3333 4444
Q ss_pred EEecCCCcccccccc--cccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEee--cCHHHHHHHHHHHHHHHHH
Q 047983 154 MYCGSEDKCLLKLNY--SLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFA--VEPSAFEIGLGRMKAFYYR 228 (233)
Q Consensus 154 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~--~~~~~l~~~~~~l~~~l~~ 228 (233)
- +.+.. ....+.......+...+.++||.+.|.... .+.+|+... .+++++++++++|.+++.+
T Consensus 903 g---------vel~~~~~~~~~~~~~~~~i~~~l~~~Gvl~~~~g~~--~~vl~~~Ppl~it~~~id~~~~~l~~~l~~ 970 (972)
T PRK06149 903 G---------VELVRDRQTLEPATEETAAICDRLLELGVIMQPTGDH--LNILKIKPPLCLDRESADFFVDMLDRVLTE 970 (972)
T ss_pred E---------EEEecCcccCCCChHHHHHHHHHHHhCCeEEeecCCC--CCEEEEECCCcCCHHHHHHHHHHHHHHHHh
Confidence 4 33210 000000012334555566789999874221 367887555 5999999999999999865
No 252
>PRK06917 hypothetical protein; Provisional
Probab=98.90 E-value=6.6e-08 Score=86.49 Aligned_cols=205 Identities=17% Similarity=0.160 Sum_probs=103.5
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCcc-ccccccCCccCEEEEccCccccCCCCc-eEEEEEecCCCccccccchhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHF-VPMGVFGSIVPVLTLGSISKRWIVPGW-RLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~-R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
+|.++|++||+++|.||+...|..+|... .....+.++ +.+++|..+ .|+ ++|.+++++ ++.+. +..
T Consensus 225 ~lr~lc~~~g~llI~DEv~tGfGRtG~~~a~~~~gv~PD-----i~~~gK~l~-~G~~Pi~a~~~~~--~i~~~--~~~- 293 (447)
T PRK06917 225 VIKEICDHYDILFIADEVMTGLGRTGAMFAMEHWGVEPD-----IMTLGKGLG-AGYTPIAATVVSD--RVMEP--ILR- 293 (447)
T ss_pred HHHHHHHHcCCEEEEechhhCcCcccchhhHHhcCCCCC-----EEEeeehhc-cCCcceEEEEEcH--HHHHH--Hhc-
Confidence 68899999999999999999875555321 111222332 457899854 575 999999987 34421 100
Q ss_pred hhhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhc----CCCcccccCCCccEEEEE
Q 047983 80 HSISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKE----IPCITCPKKPEGSMFVMY 155 (233)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~~~~~~g~~~~~ 155 (233)
. ...+....+++.++...+++++.+ +.-.++ ...+.++++-+.+.+.|++ .+.+.. ....| .++.+
T Consensus 294 ~----~~~~~~~~T~~gnpl~~aaa~a~l-~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i~~-vrG~G-l~~~i 363 (447)
T PRK06917 294 G----SRSIMSGHTLSANPLSAATALAVL-EYMEKH---NLPEKAAEKGEYLIKGLQKVQQQSTIIGD-VRGKG-LLIGV 363 (447)
T ss_pred c----CcccccccCCCCCHHHHHHHHHHH-HHHHHC---CHHHHHHHHHHHHHHHHHHHHhcCCCEEE-Eeecc-eEEEE
Confidence 0 000011112332333322333333 111111 1223333333333333333 332221 23333 44441
Q ss_pred ecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcc-c-CC-CCcEEEEee--cCHHHHHHHHHHHHHHHHHHh
Q 047983 156 CGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGIT-V-GL-KDWLRITFA--VEPSAFEIGLGRMKAFYYRHA 230 (233)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~-f-~~-~~~~Rl~~~--~~~~~l~~~~~~l~~~l~~~~ 230 (233)
-+.+|+.+ +-+.. ....-...+...+.++||.+.|... . +. .+.+|++.. .++++++++++++.+++++..
T Consensus 364 e~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~Gvl~~~~~~~~~g~~~~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~ 439 (447)
T PRK06917 364 EFVADKKT-KQPFS---KSQAVASELISVAAKNGLLLYPAVAGQDGKEGDAVIIAPPMTITYSELDELLSIFAKSVEEMM 439 (447)
T ss_pred EEeccCCc-CCCCc---chhHHHHHHHHHHHhCCcEEEecccccCCCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHHHH
Confidence 11111000 00000 0001134455556688999987421 1 11 367888755 699999999999999998764
Q ss_pred h
Q 047983 231 K 231 (233)
Q Consensus 231 ~ 231 (233)
+
T Consensus 440 ~ 440 (447)
T PRK06917 440 Q 440 (447)
T ss_pred H
Confidence 3
No 253
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=98.90 E-value=9.3e-08 Score=85.89 Aligned_cols=203 Identities=10% Similarity=0.030 Sum_probs=100.4
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHS 81 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~ 81 (233)
++.++|++||+++|.||+...|..+|.-. ....++-.+. +-+++|..+ .|+++|.+++++ .+ +. +
T Consensus 256 ~lr~lc~~~giLlI~DEV~tGfGRtG~~~-a~e~~gv~PD---iv~~gKglg-gG~PlsAv~~~~--~~-~~--~----- 320 (464)
T PRK06938 256 GLRRITEEAGIPLIVDEIQSGFGRTGKMF-AFEHAGIIPD---VVVLSKAIG-GSLPLAVVVYRE--WL-DT--W----- 320 (464)
T ss_pred HHHHHHHHcCCEEEEeccccCCCcCcHHH-HHHhcCCCCC---EEEeecccc-CCCceEEEeehh--Hh-hc--c-----
Confidence 68899999999999999999986665311 1111222222 446799865 589999999986 22 21 1
Q ss_pred hhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHh-hcCCCcccccCCCccEEEEEecCCC
Q 047983 82 ISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRL-KEIPCITCPKKPEGSMFVMYCGSED 160 (233)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L-~~~~~~~~~~~~~~g~~~~~~~~~~ 160 (233)
.......+++.++...+++++.+ +.-.++.+.+..+.+.++.....+.| ++.+.+.. .... |.++.+-+..+
T Consensus 321 ----~~~~~~~T~~gnpla~Aaa~a~L-~~l~~~~l~~~~~~~G~~l~~~L~~l~~~~~~i~~-VrG~-Glm~gie~~~~ 393 (464)
T PRK06938 321 ----QPGAHAGTFRGNQMAMAAGSATL-RYIKEHRLAEHAAAMGERLREHLRQLQRDYPQLGD-VRGR-GLMLGVEIVDP 393 (464)
T ss_pred ----CCCCCCCCCCcCHHHHHHHHHHH-HHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCeee-eecc-ceEEEEEeccC
Confidence 11111223333333322333333 21112111122222222221111222 22433222 3333 44444111111
Q ss_pred cccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEE--eecCHHHHHHHHHHHHHHHHHH
Q 047983 161 KCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRIT--FAVEPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~--~~~~~~~l~~~~~~l~~~l~~~ 229 (233)
..+.... ...+...+-...+...+.++||.+.++..++ +.+|+. +..++++++++++++.+.+.+.
T Consensus 394 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~Gll~~~~g~~~--~~l~~~Ppl~it~~eid~~~~~l~~~l~~~ 461 (464)
T PRK06938 394 QGEPDAL-GHPPANGELASLIQRECLRRGLILELGGRHG--SVVRFLPPLIITAEQIDEVAEIFAEAVAAA 461 (464)
T ss_pred ccccccc-ccCCccHHHHHHHHHHHHHCCeEEeecCCCC--CEEEEECCCccCHHHHHHHHHHHHHHHHHH
Confidence 0000000 0000000112344455567899998754333 678885 4459999999999999999764
No 254
>PRK05965 hypothetical protein; Provisional
Probab=98.90 E-value=8.2e-08 Score=86.17 Aligned_cols=198 Identities=15% Similarity=0.132 Sum_probs=101.3
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCC-ceEEEEEecCCCccccccchhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
+|.++|++||+++|.||+...|..+|.-. .....+-.+. +-+++|..+ .| +++|.+++++ ++.+. +.. .
T Consensus 240 ~lr~lc~~~gillI~DEV~tGfGRtG~~~-a~~~~gv~PD---iv~~gKgl~-gG~~Pi~av~~~~--~i~~~--~~~-~ 309 (459)
T PRK05965 240 AMREACRELGILFVADEVITGFGRTGPLF-ACEAEGVVPD---LMTVAKGLT-SGYVPMGAVLMSD--HVYQG--IAD-G 309 (459)
T ss_pred HHHHHHHHcCCEEEEechhccCccCchhh-hHhhcCCCCC---eEEechhhc-cCCcceeEEEEcH--HHHHH--Hhc-c
Confidence 68999999999999999999997666321 1111222222 447799854 48 5999999987 34321 100 0
Q ss_pred hhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhc---CCCcccccCCCccEEEEEec
Q 047983 81 SISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKE---IPCITCPKKPEGSMFVMYCG 157 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~---~~~~~~~~~~~~g~~~~~~~ 157 (233)
......+....+++.++...+++++.+ +.-.++ ...+..++.-+.+.+.|++ .+.+.. .... |.++-
T Consensus 310 -~~~~~~~~h~~T~~gnpl~~Aaa~a~L-~~l~~~---~l~~~~~~~g~~l~~~l~~l~~~~~v~~-vrG~-Gl~~g--- 379 (459)
T PRK05965 310 -AGAAAPVGHGYTYSAHPVSAAVGLEVL-RLYHEG---GLLANGQKAGPRFAAGLDALRAHPLVGD-VRGR-GLLGA--- 379 (459)
T ss_pred -ccccccccccCCCCCCHHHHHHHHHHH-HHHHhc---cHHHHHHHHHHHHHHHHHhhccCCCEEE-Eeec-ceEEE---
Confidence 000000111122332232222333333 111111 1222223333333333333 332221 2333 44444
Q ss_pred CCCcccccccccc--cCCCC---ChHHHHHHHHhccCEEEECCcccCCCCcEEEEee--cCHHHHHHHHHHHHHHHHHH
Q 047983 158 SEDKCLLKLNYSL--LEGIN---SDTEFALKLAKEESIIVLPGITVGLKDWLRITFA--VEPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 158 ~~~~~~~~~~~~~--~~~~~---~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~--~~~~~l~~~~~~l~~~l~~~ 229 (233)
+.+.... ..+.. .-...+...+.++||.+.+.. .+.+|++.. .++++++++++++.+.+++.
T Consensus 380 ------ie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gll~~~~g----~~~i~~~PpL~it~~ei~~~~~~l~~~l~~~ 448 (459)
T PRK05965 380 ------LELVADKATKTPFDAALDPADRIFDRAYANGLVFRAFG----DGVLGFAPALCCTEGEFDLIFERTRKTLDDV 448 (459)
T ss_pred ------EEEeccccccCCCCchhHHHHHHHHHHHhCCeEEEecC----CcEEEEECCCcCCHHHHHHHHHHHHHHHHHH
Confidence 2221110 00000 113445556678899997632 366888644 58999999999999999765
No 255
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=98.89 E-value=7.4e-08 Score=86.67 Aligned_cols=194 Identities=13% Similarity=0.061 Sum_probs=114.0
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCc-cccccccCCccCEEEEccCcccc-CCCCceEEEEEecCCCcccccc-----
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTH-FVPMGVFGSIVPVLTLGSISKRW-IVPGWRLGWLVTSDPNGILQDL----- 74 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~-~~~~~~~~~~~~~i~~~s~sK~~-~~~G~R~G~~~~~~~~~~~~~~----- 74 (233)
+|.++|+++|+++++|+++.--...... +.++. . --++++|++|++ |..| |++.+++ ...+..
T Consensus 202 ~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~p~~---~--~Div~~t~hK~L~GP~G---g~I~~~~--~~~~~~~~g~~ 271 (475)
T PLN03226 202 RMRKIADKVGALLMCDMAHISGLVAAQEAASPFE---Y--CDVVTTTTHKSLRGPRG---GMIFFRK--GPKPPKGQGEG 271 (475)
T ss_pred HHHHHHHHcCCEEEEEchhhhCcccCCCCCCCCC---C--CeEEEecCcccccCCCc---eEEEEch--hhcccccCCCc
Confidence 6889999999999999999864443322 22221 1 227899999987 5566 8988876 222100
Q ss_pred ---chhhhhhhhhHHhhhhh--hhhccCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCC
Q 047983 75 ---GVAFFHSISLNMRMDDY--LLLSESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPE 148 (233)
Q Consensus 75 ---~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~ 148 (233)
.+. ..+... ..+..+++... ++++..++.-.....++.++.+.++.+.+.+.|++. ++..+....
T Consensus 272 ~~~d~~--------~~i~~a~~~~~~g~p~~~~iaal~aAl~~i~~~~~~~~~~~~~~na~~L~~~L~~~-G~~l~~~~t 342 (475)
T PLN03226 272 AVYDYE--------DKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKAYQKQVKANAAALANRLMSK-GYKLVTGGT 342 (475)
T ss_pred cHHHHH--------HHhccccCCccCCCchHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHhC-CCEEEcCCC
Confidence 010 111111 11222222222 444443322222234667899999999999999885 554322212
Q ss_pred ccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC-----CCcEEEE------eecCHHHHHH
Q 047983 149 GSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL-----KDWLRIT------FAVEPSAFEI 217 (233)
Q Consensus 149 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~-----~~~~Rl~------~~~~~~~l~~ 217 (233)
.....+ +++... ++ +...+.+.|.+.||.+..+...+. ...+|+. .+.+++++++
T Consensus 343 ~~hi~l-----------v~~~~~-gi--~~~~~~~~L~~~~I~~nk~~~p~~~~~~~~~giRiGt~~lt~~g~~~~d~~~ 408 (475)
T PLN03226 343 DNHLVL-----------WDLRPL-GL--TGSRVEKVLDLAHITLNKNAVPGDSSALVPGGVRIGTPAMTSRGLVEKDFEK 408 (475)
T ss_pred CCCEEE-----------EEccCC-CC--CHHHHHHHHHHCCCEECCCCCCCCcccCCCCCcccCcHHHHHCCCCHHHHHH
Confidence 234444 333211 22 556677888899999986542221 3568873 2337888999
Q ss_pred HHHHHHHHHHH
Q 047983 218 GLGRMKAFYYR 228 (233)
Q Consensus 218 ~~~~l~~~l~~ 228 (233)
+.+.|.++++.
T Consensus 409 ia~~i~~~~~~ 419 (475)
T PLN03226 409 VAEFLHRAVTI 419 (475)
T ss_pred HHHHHHHHHHH
Confidence 99999888874
No 256
>PRK07036 hypothetical protein; Provisional
Probab=98.89 E-value=1.1e-07 Score=85.42 Aligned_cols=197 Identities=15% Similarity=0.131 Sum_probs=100.0
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCcc--ccccccCCccCEEEEccCccccCCCC-ceEEEEEecCCCccccccchhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHF--VPMGVFGSIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDLGVAF 78 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~--~~~~~~~~~~~~i~~~s~sK~~~~~G-~R~G~~~~~~~~~~~~~~~~~~ 78 (233)
+|.++|++||+++|.||+...|..+|.-. .....+.++ +-+++|.++ .| +++|.+++++ ++.+. +..
T Consensus 245 ~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~~gv~PD-----ivt~gK~l~-gG~~Pi~av~~~~--~i~~~--~~~ 314 (466)
T PRK07036 245 RMREICRRYDILYISDEVVTGFGRLGHFFASEAVFGIQPD-----IITFAKGLT-SGYQPLGAVIISE--RLLDV--ISG 314 (466)
T ss_pred HHHHHHHHcCCEEEEeechhCCCcCchhhhhhhhcCCCCC-----EEEEccccc-cCccccEEEEEcH--HHHHH--Hhc
Confidence 68999999999999999999986655311 112223332 447899854 47 5999999987 44421 100
Q ss_pred hhhhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHh---hcCCCcccccCCCccEEEEE
Q 047983 79 FHSISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRL---KEIPCITCPKKPEGSMFVMY 155 (233)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L---~~~~~~~~~~~~~~g~~~~~ 155 (233)
.... ...+.+..+++.++...+++++.+ +.-.+ .+..+..++.-+++.+.| ++.+.+.. .... |.++.
T Consensus 315 ~~~~--~~~~~~~~T~~gnpl~~aaa~a~L-e~i~~---~~l~~~~~~~g~~l~~~L~~l~~~~~v~~-vrG~-Gl~~~- 385 (466)
T PRK07036 315 PNAK--GNVFTHGFTYSGHPVACAAALKNI-EIMER---EGLCEHVREVGPYFEERLASLRELPLVGD-VRGD-HLMAC- 385 (466)
T ss_pred ccCc--CcccccCCCCCCCHHHHHHHHHHH-HHHHh---CCHHHHHHHHHHHHHHHHHHhccCCCEEE-EEee-ceEEE-
Confidence 0000 000111112332223222333332 11111 112223333333333333 33332221 2333 44444
Q ss_pred ecCCCcccccccccc--cCCCCC---hHHHHHHHHhccCEEEECCcccCCCCcEEEEee--cCHHHHHHHHHHHHHHHHH
Q 047983 156 CGSEDKCLLKLNYSL--LEGINS---DTEFALKLAKEESIIVLPGITVGLKDWLRITFA--VEPSAFEIGLGRMKAFYYR 228 (233)
Q Consensus 156 ~~~~~~~~~~~~~~~--~~~~~~---~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~--~~~~~l~~~~~~l~~~l~~ 228 (233)
+.+.... ...... -...+...+.++||.+.|.. +.+|++.. .++++++++++++.+++++
T Consensus 386 --------ve~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~-----~~~~l~Ppl~it~~~id~~~~~l~~al~~ 452 (466)
T PRK07036 386 --------VECVADKGSKALLPEDIAIGQRIDRHCQERGLLVRPLE-----HLCVLSPPLIITRAQIDEIVAILRAAIEE 452 (466)
T ss_pred --------EEEccCccccCCCCchhHHHHHHHHHHHHCCcEEeecC-----CEEEEeCCCcCCHHHHHHHHHHHHHHHHH
Confidence 2221110 000001 12345555668899998742 45777744 4899999999999998877
Q ss_pred Hh
Q 047983 229 HA 230 (233)
Q Consensus 229 ~~ 230 (233)
..
T Consensus 453 ~~ 454 (466)
T PRK07036 453 TA 454 (466)
T ss_pred HH
Confidence 63
No 257
>PRK14012 cysteine desulfurase; Provisional
Probab=98.89 E-value=1.5e-07 Score=83.01 Aligned_cols=190 Identities=13% Similarity=0.087 Sum_probs=105.8
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|.++|+++|+++|+|++++. +..+..+...+. -+++.|+.|.++ |+ ++|++++++. ... .+...
T Consensus 164 ~~I~~la~~~g~~vivD~a~~~----g~~~~~~~~~~~---D~~~~s~~K~~g-p~-g~G~l~~~~~--~~~--~~~~~- 229 (404)
T PRK14012 164 AAIGEICRERGIIFHVDAAQSV----GKVPIDLSKLKV---DLMSFSAHKIYG-PK-GIGALYVRRK--PRV--RLEAQ- 229 (404)
T ss_pred HHHHHHHHHcCCEEEEEcchhc----CCcccCcccCCC---CEEEEehhhccC-CC-ceEEEEEecC--CCC--CCCce-
Confidence 4789999999999999999975 222222322222 266779999754 44 6999988873 111 11100
Q ss_pred hhhhHHhhhhhhhhccCc-chH-HHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccC-C---CccEEEE
Q 047983 81 SISLNMRMDDYLLLSESV-YTT-VGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKK-P---EGSMFVM 154 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~---~~g~~~~ 154 (233)
..+. .... .+..++ +.. ..++.+.+.. .+.......++.++.++++.+.|++++++..+.. + ...+++|
T Consensus 230 ~~g~-~~~~---~~~~gt~~~~~~~~l~~al~~-~~~~~~~~~~~~~~l~~~l~~~L~~~~~i~~~~~~~~~~~~~~~~~ 304 (404)
T PRK14012 230 MHGG-GHER---GMRSGTLPTHQIVGMGEAARI-AKEEMATENERIRALRDRLWNGIKDIEEVYLNGDLEQRVPGNLNVS 304 (404)
T ss_pred ecCC-CccC---CccCCCcCHHHHHHHHHHHHH-HHhhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCEEEEE
Confidence 0000 0000 011111 111 1222222211 1234455677888888888888877665442111 1 1233445
Q ss_pred EecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC-------------------CCcEEEEeec--CHH
Q 047983 155 YCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL-------------------KDWLRITFAV--EPS 213 (233)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~-------------------~~~~Rl~~~~--~~~ 213 (233)
+... +..+ +...| .++.|.+|..|.+ .+.+|+++.. +++
T Consensus 305 -----------~~~~------~~~~-~~~~l--~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~~ 364 (404)
T PRK14012 305 -----------FNYV------EGES-LIMAL--KDLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEE 364 (404)
T ss_pred -----------EeCc------CHHH-HHHhC--CCeEEEchhhhCCCCCCCCHHHHHcCCChhhcCceEEEEecCCCCHH
Confidence 3221 1222 33334 3777777755532 2679999996 899
Q ss_pred HHHHHHHHHHHHHHHH
Q 047983 214 AFEIGLGRMKAFYYRH 229 (233)
Q Consensus 214 ~l~~~~~~l~~~l~~~ 229 (233)
+++.+++.|+++++.+
T Consensus 365 dvd~~~~~l~~~~~~~ 380 (404)
T PRK14012 365 EIDYAIELVRKSIGKL 380 (404)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999988765
No 258
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.88 E-value=1.1e-07 Score=85.34 Aligned_cols=196 Identities=13% Similarity=0.098 Sum_probs=99.5
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCcc-ccccccCCccCEEEEccCccccCCCC-ceEEEEEecCCCccccccchhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHF-VPMGVFGSIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G-~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
+|.++|++||+++|.||+...|..+|.-. .....+.+ . +-+++|..+ .| +++|.+++++ ++.+. +.
T Consensus 240 ~lr~lc~~~g~llI~DEV~TGfGRtG~~~a~~~~gv~P--D---iv~~gKgl~-gG~~Pi~av~~~~--ei~~~--~~-- 307 (466)
T PRK07030 240 LLREACDRYGVHLIHDEIAVGFGRTGTMFACEQAGIRP--D---FLCLSKALT-GGYLPLAAVLTTD--TVYQA--FY-- 307 (466)
T ss_pred HHHHHHHHcCCEEEEeehhhCcCccccchHHHhcCCCC--C---EEeeehhcc-CCcccceEEEecH--HHHHH--Hh--
Confidence 68999999999999999999987666321 11122223 2 446699855 58 5999999987 34321 10
Q ss_pred hhhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHh---hcCCCcccccCCCccEEEEEe
Q 047983 80 HSISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRL---KEIPCITCPKKPEGSMFVMYC 156 (233)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L---~~~~~~~~~~~~~~g~~~~~~ 156 (233)
........+.+..+++.++...+++.+. ++.-.++ +..+..++.-+++.+.| .+.+.+.. .... |.++-
T Consensus 308 ~~~~~~~~~~h~~T~~gnpla~aaa~a~-L~~i~~~---~l~~~~~~~G~~l~~~L~~l~~~~~v~~-vrG~-Gl~~g-- 379 (466)
T PRK07030 308 DDYPTLRAFLHSHSYTGNPLACAAALAT-LDIFEQD---NVIENNRALARRMAEATAHLADHPHVAE-VRQT-GMILA-- 379 (466)
T ss_pred cccccccccccCCCCCCCHHHHHHHHHH-HHHHHhc---CHHHHHHHHHHHHHHHHHHHhcCCCEEE-eEec-eeEEE--
Confidence 0000000011122233222222233333 2211111 12222222233333333 23333221 2333 44444
Q ss_pred cCCCccccccccccc--CCC-CC--hHHHHHHHHhccCEEEECCcccCCCCcEEEE--eecCHHHHHHHHHHHHHHHHHH
Q 047983 157 GSEDKCLLKLNYSLL--EGI-NS--DTEFALKLAKEESIIVLPGITVGLKDWLRIT--FAVEPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 157 ~~~~~~~~~~~~~~~--~~~-~~--~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~--~~~~~~~l~~~~~~l~~~l~~~ 229 (233)
+.+..... .+. .+ ....+...+.++||.+.|.. +.+|+. +..++++++++++++.+.+++.
T Consensus 380 -------ie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g-----~~i~~~Ppl~it~~eid~~~~~l~~al~~~ 447 (466)
T PRK07030 380 -------IEMVQDKASKTPYPWQERRGLKVYQHALERGALLRPLG-----SVVYFLPPYVITPEQIDFLAEVASEGIDIA 447 (466)
T ss_pred -------EEeccCccccccCcchhHHHHHHHHHHHHCCeEEEecC-----CEEEEECCccCCHHHHHHHHHHHHHHHHHH
Confidence 22211000 000 00 11344555668899998732 567775 4459999999999999999875
No 259
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=98.88 E-value=6.7e-08 Score=85.03 Aligned_cols=112 Identities=16% Similarity=0.154 Sum_probs=66.5
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceE-EEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRL-GWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~-G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|+++|+++|+++|+|++|....... ++. ... -+++.|+||.++++|.++ |++++++ ++++
T Consensus 164 ~~I~~la~~~gi~livD~a~a~~~~~~----~~~-~g~---Divv~S~sK~lgg~g~~~gG~v~~~~--~li~------- 226 (391)
T TIGR01328 164 ERVCRDAHSQGVKVIVDNTFATPMLTN----PVA-LGV---DVVVHSATKYIGGHGDVVAGLICGKA--ELLQ------- 226 (391)
T ss_pred HHHHHHHHHcCCEEEEECCCchhccCC----chh-cCC---CEEEccccccccCCCCceEEEEEcCH--HHHH-------
Confidence 478999999999999999998644321 121 122 278899999999999876 5565554 3332
Q ss_pred hhhhhHHhhhhh---hhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 047983 80 HSISLNMRMDDY---LLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPC 140 (233)
Q Consensus 80 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 140 (233)
+++.. ...+...++..+++. + .. -+.+....++..++.+.+.+.|++.|.
T Consensus 227 -------~l~~~~~~~~~g~~l~~~~a~l~-l--~~-L~tl~~r~~~~~~na~~la~~L~~~p~ 279 (391)
T TIGR01328 227 -------QIRMVGIKDMTGSVISPFDAWLI-L--RG-LKTLNIRMKRHSENAMKVAEYLKSHPA 279 (391)
T ss_pred -------HHHHHHHHhCCCCCCCcHHHHHH-H--hC-cCcHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 22211 111222222212111 1 11 123344566778888888888877654
No 260
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=98.88 E-value=2.9e-08 Score=89.22 Aligned_cols=197 Identities=14% Similarity=0.058 Sum_probs=99.8
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCcc-ccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHF-VPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
+|.++|++||+++|.||++..| ..+... .....+.++ +.+++|.++ .|+.+|.+++++ ++++. +.
T Consensus 271 ~lr~lc~~~g~lLI~DEV~tGf-R~g~~ga~~~~gv~PD-----i~t~gK~lg-gG~Pigav~g~~--ei~~~--~~--- 336 (474)
T PLN02482 271 GLREITKENGALLVFDEVMTGF-RIAYGGAQEYFGITPD-----LTTLGKVIG-GGLPVGAYGGRR--EIMEM--VA--- 336 (474)
T ss_pred HHHHHHHHcCCEEEEeccccCe-ecCcchHhHHhCCCCC-----EEEecchhh-CCCceEEEEEcH--HHHHh--hc---
Confidence 6899999999999999999988 444221 112222232 458899965 689999998877 44421 10
Q ss_pred hhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcC-C--CcccccCCCccEEEEEec
Q 047983 81 SISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEI-P--CITCPKKPEGSMFVMYCG 157 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~--~~~~~~~~~~g~~~~~~~ 157 (233)
. ........+++.++...+++++.+ +.-.+ ....+.++++-+++.+.|+++ . +........+|++...+.
T Consensus 337 ~---~~~~~~~~T~~gnpl~~aAala~L-~~l~~---~~~~~~~~~~g~~l~~~L~~l~~~~g~~~~~~~v~g~~gi~f~ 409 (474)
T PLN02482 337 P---AGPMYQAGTLSGNPLAMTAGIHTL-KRLQQ---PGTYEYLDKITKKLIQGILEAGKKAGHEMCGGYISGMFGFFFT 409 (474)
T ss_pred c---CCCcccccCcchhHHHHHHHHHHH-HHHhc---cCHHHHHHHHHHHHHHHHHHHHHhcCCCEEEcccceEEEEEEe
Confidence 0 001111122322333322333332 11111 124444455555555555442 1 111111222444433222
Q ss_pred CCCcccccccccccCCCCC--hHHHHHHHHhccCEEEECCcccCCCCcEEEEeecCHHHHHHHHHHHHHHHHH
Q 047983 158 SEDKCLLKLNYSLLEGINS--DTEFALKLAKEESIIVLPGITVGLKDWLRITFAVEPSAFEIGLGRMKAFYYR 228 (233)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~--~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~~~~~l~~~~~~l~~~l~~ 228 (233)
++.+. +.... ...+ ....+.+.+.++||.+.|.. +. .++ +++..+++++++.++.+.+++++
T Consensus 410 ~~~~~----~~~~~-~~~d~~~~~~~~~~l~~~Gv~~~~~~-~~--~~~-psl~ht~~dId~~l~al~~~l~~ 473 (474)
T PLN02482 410 EGPVY----NFADA-KKSDTAKFARFHRGMLEEGVYLAPSQ-FE--AGF-TSLAHTEEDIDFTIAAAERVLAR 473 (474)
T ss_pred cCCcc----Chhhh-ccCCHHHHHHHHHHHHHCCeEEeccC-CC--CCc-CCCCCCHHHHHHHHHHHHHHHHh
Confidence 21110 00000 0001 12334455567899998732 11 122 67777999999999999998864
No 261
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=98.87 E-value=4.3e-08 Score=87.29 Aligned_cols=196 Identities=13% Similarity=0.036 Sum_probs=97.6
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCcc-ccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHF-VPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
+|.++|++||+++|.||++..+ ..|... .....+.+ .+ .+++|.++ .|+.+|++++++ ++++. +.
T Consensus 226 ~l~~lc~~~g~llI~DEv~tG~-R~G~~ga~~~~gv~P--Di---~~~gK~lg-gG~p~~av~~~~--~i~~~--~~--- 291 (433)
T PRK00615 226 GIIQTCRRTGSLSIMDEVVTGF-RVAQGGAAAIYHVKP--DI---TVYGKILG-GGLPAAAVVAHK--SIMDH--LA--- 291 (433)
T ss_pred HHHHHHHHcCCEEEEEcccccc-cccHhHHHHhcCCCC--Ce---EEEccccc-CCcceeeeeecH--HHHhh--hc---
Confidence 6899999999999999999887 444211 11112222 22 35899865 468899999987 34321 11
Q ss_pred hhhhHHhhhhhhhhccCcchHH--HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHh----hcCC-CcccccCCCccEEE
Q 047983 81 SISLNMRMDDYLLLSESVYTTV--GAVPQILEKTEEEFFSKITDILREAADICCDRL----KEIP-CITCPKKPEGSMFV 153 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L----~~~~-~~~~~~~~~~g~~~ 153 (233)
..-..+...+.+.++.. ++++.+ +.-.+ ...++.++++-+++.+.| ++.+ .+.. .. .|.++.
T Consensus 292 -----~~~~~~~~~T~~g~p~~~aa~la~L-~~i~~---~~~~~~~~~~g~~l~~~l~~~~~~~g~~v~~-~r-~G~~~~ 360 (433)
T PRK00615 292 -----PEGTIFQAGTLSGNPLAMAAGKASI-NLCRE---QGFYTQLSTLEQNFLSPIEEMIRSQGFPVSL-VR-YGSMFS 360 (433)
T ss_pred -----CCCCcccCCCCcccHHHHHHHHHHH-HHHhc---ccHHHHHHHHHHHHHHHHHHHHHHcCCCeEE-Ee-eceEEE
Confidence 00000111122223332 333332 11111 112333333334443333 3321 1221 23 344444
Q ss_pred EEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeecCHHHHHHHHHHHHHHHHHH
Q 047983 154 MYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAVEPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~~~~~l~~~~~~l~~~l~~~ 229 (233)
..+-.....+++-.. . ....-...+...+.++||.+.|... + .++ +|...++++++..++.+.++++..
T Consensus 361 i~~~~~~~~~~~~~~-~--~~~~~~~~~~~~l~~~Gv~~~~~~~-~--~~~-ls~~ht~~did~~~~a~~~~~~~~ 429 (433)
T PRK00615 361 FFFNENRPNNLAEAQ-L--SDIEAFQTFYQSAFSKGVYLSPSPF-E--ASF-LSSAHSMENLDYAQNVLIDSLEKV 429 (433)
T ss_pred EEEeCCCCCChHHHh-h--CCHHHHHHHHHHHHHCCeeecCccc-c--ccc-eecCCCHHHHHHHHHHHHHHHHHH
Confidence 322111111111000 0 0001123455556678999987431 1 122 677779999999999999998764
No 262
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=98.86 E-value=3.9e-08 Score=88.22 Aligned_cols=196 Identities=16% Similarity=0.125 Sum_probs=101.9
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|.++|++||+++|.||+...|..+|.-. .....+-.+. +-+++|..+ .|+++|.+++++ . ++. +
T Consensus 249 ~~lr~lc~~~g~LlI~DEV~tGfGRtG~~~-a~~~~gv~PD---ivt~gK~l~-gG~Pi~av~~~~--~-~~~--~---- 314 (459)
T PRK06931 249 QKIREVTQKHGILLIVDEVQAGFARTGKMF-AFEHAGIEPD---IIVMSKAVG-GGLPLAVLGIKK--E-FDA--W---- 314 (459)
T ss_pred HHHHHHHHHcCCEEEEecchhcCCcCchHH-HhhhcCCCCC---EEEeccccc-CCcceeeeeeHH--H-Hhh--c----
Confidence 368899999999999999999986665311 1111222222 457799955 589999988765 2 211 1
Q ss_pred hhhhHHhhhhhhhhccCcchHHHHHHHH--hhh-cHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEec
Q 047983 81 SISLNMRMDDYLLLSESVYTTVGAVPQI--LEK-TEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCG 157 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~ 157 (233)
.......+++.++...+++++.+ ++. +..++..++-+++++..+ +..++.+.+.. ....|. ++.
T Consensus 315 -----~~~~~~~T~~gnpla~aaala~L~~l~~~~l~~~~~~~G~~l~~~L~---~l~~~~~~i~~-vrG~Gl-m~g--- 381 (459)
T PRK06931 315 -----QPGGHTGTFRGNQLAMATGLTTLKILKEENLAQNAAERGEWLKAQLA---ELQKRYPCIGN-VRGRGL-MIG--- 381 (459)
T ss_pred -----cCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH---HHHHhCCCeEe-EecCce-EEE---
Confidence 11112223333333322333333 111 111222223333332222 22223443322 334444 444
Q ss_pred CCCccccccccc-c-------cCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEee--cCHHHHHHHHHHHHHHHH
Q 047983 158 SEDKCLLKLNYS-L-------LEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFA--VEPSAFEIGLGRMKAFYY 227 (233)
Q Consensus 158 ~~~~~~~~~~~~-~-------~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~--~~~~~l~~~~~~l~~~l~ 227 (233)
+.+... . .+...+-...+...+.++||.+.++... .+.+|+... .++++++++++++.+.+.
T Consensus 382 ------iel~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~--~~~l~~~Ppl~it~~eid~~~~~l~~~l~ 453 (459)
T PRK06931 382 ------IEIVDERQPADAMGSYPADGELAAAIQKACFENGLLLERGGRN--GNVVRLLPPLLITQAECEEFIDRFEQALL 453 (459)
T ss_pred ------EEEccCcccccccccCCccHHHHHHHHHHHHHCCcEEeecCCC--CCEEEEECCCCcCHHHHHHHHHHHHHHHH
Confidence 222110 0 0000011233445566889999875432 356776555 599999999999999998
Q ss_pred HHhh
Q 047983 228 RHAK 231 (233)
Q Consensus 228 ~~~~ 231 (233)
+..+
T Consensus 454 ~~~~ 457 (459)
T PRK06931 454 AAVK 457 (459)
T ss_pred HHHh
Confidence 7654
No 263
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=98.85 E-value=1.9e-07 Score=81.90 Aligned_cols=113 Identities=16% Similarity=0.140 Sum_probs=70.4
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccC-CCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWI-VPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|+++|+++|+++|+|++|....... ++. +.. .++++|+||.++ .+|++.||++++++ ++.
T Consensus 156 ~~I~~la~~~g~~vvvD~a~~~~~~~~----pl~-~ga---Divv~S~sK~l~G~~~~~~G~i~~~~~-~~~-------- 218 (382)
T TIGR02080 156 AKICHLAKAVGAVVVVDNTFLSPALQN----PLA-LGA---DLVLHSCTKYLNGHSDVIAGAVIAKDP-QVA-------- 218 (382)
T ss_pred HHHHHHHHHcCCEEEEECCCcccccCC----chh-hCC---CEEEeecceeccCCCCceeEEEEeCCH-HHH--------
Confidence 478999999999999999998654221 221 222 288899999875 58899999988653 232
Q ss_pred hhhhhHHhhhhhhhh-ccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 047983 80 HSISLNMRMDDYLLL-SESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPC 140 (233)
Q Consensus 80 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 140 (233)
.+++..... +...++..+. ++ ...-+.+..+.++..++...+.+.|+..|.
T Consensus 219 ------~~l~~~~~~~g~~~sp~~a~---l~-lr~l~tl~~R~~~~~~na~~~a~~L~~~p~ 270 (382)
T TIGR02080 219 ------EELAWWANNLGVTGGAFDSY---LT-LRGLRTLVARMRLQQRNAQAIVEYLQTQPL 270 (382)
T ss_pred ------HHHHHHHHccCCCCCHHHHH---HH-HcccchHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 333322221 2222232111 11 122234555567777888888899887553
No 264
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=98.85 E-value=2.7e-07 Score=79.71 Aligned_cols=193 Identities=18% Similarity=0.097 Sum_probs=124.1
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
+||.++|+++++++.+|-+..- |.-+..+..+.-+ +...|-.|..|..| +|.+..++.- -++ .++
T Consensus 161 ~ei~~i~k~~~i~fHvDAvQa~----Gkipi~~~~~~vD---~ls~SaHK~~GpkG--iGaLyv~~~~-~~~--p~i--- 225 (386)
T COG1104 161 AEIGEICKERGILFHVDAVQAV----GKIPIDLEELGVD---LLSFSAHKFGGPKG--IGALYVRPGV-RLE--PLI--- 225 (386)
T ss_pred HHHHHHHHHcCCeEEEehhhhc----CceeccccccCcc---eEEeehhhccCCCc--eEEEEECCCC-ccC--cee---
Confidence 4799999999999999998876 4444444433322 55567779988888 7888876531 111 111
Q ss_pred hhhhHHhhhhhhhhccCcchHH--HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhc-CCCcccccCCC---ccEEEE
Q 047983 81 SISLNMRMDDYLLLSESVYTTV--GAVPQILEKTEEEFFSKITDILREAADICCDRLKE-IPCITCPKKPE---GSMFVM 154 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~---~g~~~~ 154 (233)
.--.+-....+++.... .+++..++ ...+.++.....+++.++.+.+.|.+ +|+... +... -..-+.
T Consensus 226 -----~GGgQE~g~RsGTenv~~Ivg~~~A~~-~a~~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~-~g~~~~rlP~~~~ 298 (386)
T COG1104 226 -----HGGGQERGLRSGTENVPGIVGFGKAAE-IAVEELEEENARLRKLRDRLEDGLLEIIPDVYL-NGDDEPRLPNILN 298 (386)
T ss_pred -----ccCcCCCCCCCCCccHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEE-cCCcccCCCCeEE
Confidence 11111112222332222 44444332 23456777788888899999999987 455432 1111 122222
Q ss_pred EecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC-------------------CCcEEEEeec--CHH
Q 047983 155 YCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL-------------------KDWLRITFAV--EPS 213 (233)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~-------------------~~~~Rl~~~~--~~~ 213 (233)
+.++ ++ ..+.+...|..+||.+..|+.+.. .+.+|+||+. +++
T Consensus 299 ---------~~f~-----gv--~gE~ll~~L~~~gI~vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~e 362 (386)
T COG1104 299 ---------FSFP-----GV--EGESLLLALDLAGIAVSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFSLGRFTTEE 362 (386)
T ss_pred ---------EEeC-----CC--cHHHHHHhccccCeEEeccccccCCCCCccHHHHHcCCChHHhCccEEEEcCCCCCHH
Confidence 2233 33 667777889899999999999952 3789999996 799
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 047983 214 AFEIGLGRMKAFYYRHAK 231 (233)
Q Consensus 214 ~l~~~~~~l~~~l~~~~~ 231 (233)
+++.+++.+.+++++.+.
T Consensus 363 ei~~~~~~l~~~i~~lr~ 380 (386)
T COG1104 363 EIDAAAEALKEIIKRLRE 380 (386)
T ss_pred HHHHHHHHHHHHHHHHhh
Confidence 999999999999988753
No 265
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=98.85 E-value=1.5e-07 Score=82.72 Aligned_cols=114 Identities=16% Similarity=0.091 Sum_probs=68.7
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCC-ceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|+++|+++|+++|+|++|....... ++. ... -+++.|+||.++.+| .+.||+++++. .+.
T Consensus 166 ~~I~~la~~~gi~lIvD~a~a~~~~~~----p~~-~ga---Divv~S~sK~l~g~~~~~gG~vv~~~~-~l~-------- 228 (388)
T PRK07811 166 AALAELAHDAGAKVVVDNTFASPYLQQ----PLA-LGA---DVVVHSTTKYIGGHSDVVGGALVTNDE-ELD-------- 228 (388)
T ss_pred HHHHHHHHHcCCEEEEECCCCccccCC----chh-hCC---cEEEecCceeecCCCCcEEEEEEECCH-HHH--------
Confidence 478999999999999999998754321 221 222 288999999988754 67899998763 222
Q ss_pred hhhhhHHhhhhhhh-hccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCc
Q 047983 80 HSISLNMRMDDYLL-LSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCI 141 (233)
Q Consensus 80 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 141 (233)
.++..... .+...++..+.+.. ..-+.+..+.++..++...+.+.|++.|.+
T Consensus 229 ------~~~~~~~~~~g~~~s~~~a~l~~----~~L~tl~~R~~~~~~na~~la~~L~~~p~v 281 (388)
T PRK07811 229 ------EAFAFLQNGAGAVPGPFDAYLTL----RGLKTLAVRMDRHSENAEAVAEFLAGHPEV 281 (388)
T ss_pred ------HHHHHHHHhcCCCCCHHHHHHHH----hccCcHHHHHHHHHHHHHHHHHHHHhCCCe
Confidence 22222211 12222222111111 111234555666788888888888876543
No 266
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=98.85 E-value=1.8e-07 Score=81.53 Aligned_cols=188 Identities=20% Similarity=0.217 Sum_probs=108.3
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|.++|+++|+++++|-+++-. .-+..+..++. -+++.|.-|..|.+| +|++..++ ..+++++-....
T Consensus 159 ~~I~~~~~~~~~~~~vD~~~~~g----~~~id~~~~~~---D~~~~s~~Kl~gp~G--~g~l~v~~--~~~~~~~p~~~~ 227 (371)
T PF00266_consen 159 EEIAKLAHEYGALLVVDAAQSAG----CVPIDLDELGA---DFLVFSSHKLGGPPG--LGFLYVRP--EAIERLRPAKPG 227 (371)
T ss_dssp HHHHHHHHHTTSEEEEE-TTTTT----TSS--TTTTTE---SEEEEESTSTTSSST--EEEEEEEH--HHHHHHHTSSSS
T ss_pred ceehhhhhccCCceeEechhccc----ccccccccccc---ceeeecccccCCCCc--hhhheehh--hhhhcccccccc
Confidence 37899999999999999999862 22223333333 288999999656677 69999988 344321100000
Q ss_pred hhh-hHHhhhhh------hhhccCcchH-H-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCC----
Q 047983 81 SIS-LNMRMDDY------LLLSESVYTT-V-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKP---- 147 (233)
Q Consensus 81 ~~~-~~~~~~~~------~~~~~~~~~~-~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~---- 147 (233)
... ........ ..+..++++. . .++...++.-.+.-+++.+++..+..+++.+.|++++++.. ..|
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~-~~~~~~~ 306 (371)
T PF00266_consen 228 GGYLDFPSLQEYGLADDARRFEGGTPNVPAIYALNEALKLLEEIGIERIRERIRELAEYLREALEELPGIEV-LGPDDEP 306 (371)
T ss_dssp SSTTTHHHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTEEE-SSSSCGG
T ss_pred ccccccccchhcccccccccccccceeeehhhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhcCCceeE-eeecccc
Confidence 000 00000100 0111122222 2 34443333222344567788889999999999988877654 222
Q ss_pred -CccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccC--------CCCcEEEEeec--CHHHHH
Q 047983 148 -EGSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVG--------LKDWLRITFAV--EPSAFE 216 (233)
Q Consensus 148 -~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~--------~~~~~Rl~~~~--~~~~l~ 216 (233)
.++...+ .+ + +. +.+.+.+.|+++||.+..|.... ..+.+|+|+.. +.++++
T Consensus 307 ~~~~i~~~----------~~--~---~~--~~~~~~~~L~~~~I~~~~G~~~~~~~~~~~~~~~~iRvS~~~~nt~~dv~ 369 (371)
T PF00266_consen 307 RRPSIVSF----------NL--P---GS--DADDVVKYLEERGIAVSTGSACAGPSLDILGMGGVIRVSLHYYNTEEDVD 369 (371)
T ss_dssp BGTTEEEE----------EE--T---TS--SHHHHHHHHHHHTEEEEESTTTCHHHHHHHHTTTEEEEE-GTTSSHHHHH
T ss_pred cccceEEE----------ee--c---CC--CHHHHHHHHhhcCEEEeccCcccHHHHHHhCCCCEEEEeccCCCCHHHHh
Confidence 1233332 23 2 22 56777777888899999976654 25899999996 777776
Q ss_pred H
Q 047983 217 I 217 (233)
Q Consensus 217 ~ 217 (233)
+
T Consensus 370 ~ 370 (371)
T PF00266_consen 370 R 370 (371)
T ss_dssp H
T ss_pred h
Confidence 5
No 267
>PRK05968 hypothetical protein; Provisional
Probab=98.84 E-value=1.4e-07 Score=83.05 Aligned_cols=114 Identities=18% Similarity=0.183 Sum_probs=67.6
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCC-ceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|.++|++||+++|+|++|....+.. ++. .+. -+++.|+||.++.+| .+.|++++++ .++
T Consensus 167 ~~i~~la~~~gi~vivD~a~a~~~~~~----p~~-~g~---Divv~S~tK~l~g~~~~~gG~i~~~~--~~~-------- 228 (389)
T PRK05968 167 AALAALAKRHGVVTMIDNSWASPVFQR----PIT-LGV---DLVIHSASKYLGGHSDTVAGVVAGSK--EHI-------- 228 (389)
T ss_pred HHHHHHHHHcCCEEEEECCCcchhccC----chh-cCC---cEEEeeccccccCCCCeEEEEEEECH--HHH--------
Confidence 368999999999999999998754332 121 222 277889999988755 6889988776 333
Q ss_pred hhhhhHHhhhhhh--hhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 047983 80 HSISLNMRMDDYL--LLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCIT 142 (233)
Q Consensus 80 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 142 (233)
.+++... .++...++..+++. + ... +.+....++-.++.+.+.+.|++.+.+.
T Consensus 229 ------~~l~~~~~~~~g~~~~~~~A~~~-l--~~L-~tl~~r~~~~~~~a~~la~~L~~~p~v~ 283 (389)
T PRK05968 229 ------ARINAEAYPYLGAKLSPFEAWLL-L--RGL-RTLPLRMKAHEASALEIARRLKAHPVVE 283 (389)
T ss_pred ------HHHHHHHHHhCCCCCChHHHHHH-H--ccc-CcHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 2222211 12212222211111 1 111 2334455555666788888888876654
No 268
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=98.83 E-value=2.7e-07 Score=81.05 Aligned_cols=113 Identities=14% Similarity=0.140 Sum_probs=72.1
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccC-CCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWI-VPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|.++|+++|+++|+|++|...... .++ .... + +++.|++|.++ .++.+.||+++.++ ++.
T Consensus 157 ~~I~~ia~~~g~~vivDeay~~~~~~----~pl-~~ga-D--ivv~S~tK~l~G~~d~~~G~vi~~~~-~~~-------- 219 (386)
T PRK08045 157 AKICHLAREAGAVSVVDNTFLSPALQ----NPL-ALGA-D--LVLHSCTKYLNGHSDVVAGVVIAKDP-DVV-------- 219 (386)
T ss_pred HHHHHHHHHcCCEEEEECCCCccccC----Cch-hhCC-C--EEEeecceeccCCCCceeEEEEeCcH-HHH--------
Confidence 37899999999999999999875321 122 2223 2 88999999885 57789999988653 233
Q ss_pred hhhhhHHhhhhh-hhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 047983 80 HSISLNMRMDDY-LLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPC 140 (233)
Q Consensus 80 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 140 (233)
.++... ..++...++.. +++-...-+.+..+.++..+++..+.+.|++.|.
T Consensus 220 ------~~l~~~~~~~g~~~~p~~----~~l~~rgl~tl~~R~~~~~~na~~la~~L~~~p~ 271 (386)
T PRK08045 220 ------TELAWWANNIGVTGGAFD----SYLLLRGLRTLVPRMELAQRNAQAIVKYLQTQPL 271 (386)
T ss_pred ------HHHHHHHHhcCCCCCHHH----HHHHHhhhccHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 222211 12222222221 1111122234777888899999999999988654
No 269
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=98.83 E-value=5.2e-08 Score=85.68 Aligned_cols=202 Identities=14% Similarity=0.041 Sum_probs=105.8
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
+++.++|++||+++|.||+=..|..+|. +.+.+..+..--+-+++|.....=+++|.+++++ .+.+. +.
T Consensus 239 ~~vr~iC~ky~ILlI~DEV~tGFGRTG~----~FA~e~~gi~PDi~~~aKGLT~GY~Pl~a~l~~~--~I~~~--~~--- 307 (449)
T COG0161 239 KRVREICDKYGILLIADEVATGFGRTGK----MFACEHAGIVPDILCLAKGLTGGYLPLSAVLTSD--RIYEA--FS--- 307 (449)
T ss_pred HHHHHHHHHcCcEEEeecceeCCCcCch----hhhhhhcCCCCCeeeecccccccchhhHhHhhhH--HHHHH--Hh---
Confidence 3689999999999999999999988874 3333332223336688996554445555566655 33321 11
Q ss_pred hhhhHHhhhhhhhhccCcchHH--HHHHHHhhhc-HHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEec
Q 047983 81 SISLNMRMDDYLLLSESVYTTV--GAVPQILEKT-EEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCG 157 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~ 157 (233)
+-. ...+. ...+.+.++.+ ++++.+ +.- .+.++++.++.-..-.+.|.+.+.+.|.+.. +.. -|+..-
T Consensus 308 ~~~-~~~f~--HG~TYsghPlacAaAla~L-~i~e~e~l~~~~~~~~~~l~~~L~~~l~~~p~Vgd-VR~-~Gli~~--- 378 (449)
T COG0161 308 DGD-AGAFM--HGHTYSGNPLACAAALANL-DILEEEDLLERVAEIGAYLQAGLQAALADHPLVGD-VRG-LGLIGA--- 378 (449)
T ss_pred ccc-CCeec--cCCccccCHHHHHHHHHHH-HHHHhcCHHHHHHHHHHHHHHHHHHhcccCCcEEE-eec-cceEEE---
Confidence 000 01111 22344455554 444433 111 1233333333322223333332333223221 222 244444
Q ss_pred CCCccccccccccc--CCC-CChHHHHHHHHhccCEEEECCcccCCCCcEEEEeecCHHHHHHHHHHHHHHHHHHhh
Q 047983 158 SEDKCLLKLNYSLL--EGI-NSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAVEPSAFEIGLGRMKAFYYRHAK 231 (233)
Q Consensus 158 ~~~~~~~~~~~~~~--~~~-~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~~~~~l~~~~~~l~~~l~~~~~ 231 (233)
+++..... .+. .+-...+.+.+.++|++++|.. ..-++--.+..+++++++.++.+.+.+++...
T Consensus 379 ------iElv~d~~t~~~f~~~~~~~~~~~~~e~Gl~iRp~g---~~i~~~PPliit~~eid~l~~~l~~al~~~~~ 446 (449)
T COG0161 379 ------IELVADKATKTPFEARVGARVRAAALERGLLIRPLG---DVIYLMPPLIITREEIDELVDALREALDETLA 446 (449)
T ss_pred ------EEEecccccccchhhhHHHHHHHHHHHCCeEEeecC---CEEEEcCCccCCHHHHHHHHHHHHHHHHHHHh
Confidence 33322110 000 0235677788889999999963 11111112334899999999999999987654
No 270
>PRK07503 methionine gamma-lyase; Provisional
Probab=98.82 E-value=3.3e-07 Score=80.99 Aligned_cols=112 Identities=17% Similarity=0.167 Sum_probs=66.6
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCC-ceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|.++|+++|+++|+|++|...... .++. ... .+++.|+||.++.+| .|.||+++++ ++.
T Consensus 170 ~~I~~la~~~gi~lIvD~a~a~~~~~----~~l~-~g~---Di~v~S~tK~l~g~gd~~gG~v~~~~--~l~-------- 231 (403)
T PRK07503 170 AAVAEIAHGAGAKVVVDNTYCTPYLQ----RPLE-LGA---DLVVHSATKYLGGHGDITAGLVVGGK--ALA-------- 231 (403)
T ss_pred HHHHHHHHHcCCEEEEECCCcccccC----Cchh-hCC---CEEEccccccccCCCceeEEEEEcCH--HHH--------
Confidence 47899999999999999999864322 1221 222 388999999998876 7888888655 333
Q ss_pred hhhhhHHhhhhh--h-hhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 047983 80 HSISLNMRMDDY--L-LLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPC 140 (233)
Q Consensus 80 ~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 140 (233)
.+++.. . ..+...++..++ ++..+ -+.+..+.++..++...+.+.|++.|.
T Consensus 232 ------~~l~~~~~~~~~g~~~s~~~a~---l~l~~-L~tl~~r~~~~~~na~~~a~~L~~~p~ 285 (403)
T PRK07503 232 ------DRIRLEGLKDMTGAVMSPFDAF---LLMRG-LKTLALRMDRHCASAQAVAEWLARHPA 285 (403)
T ss_pred ------HHHHhhhHHhCcCCCCCHHHHH---HHHcC-cchHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 223211 1 112222222121 11111 223444445556778888888877654
No 271
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=98.80 E-value=8.2e-08 Score=85.55 Aligned_cols=185 Identities=12% Similarity=0.129 Sum_probs=90.7
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHS 81 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~ 81 (233)
+|.++|++||+++|.||+++.|..+|... .....+-...++ +++|.+ ..| |++.... +. .+.. ..
T Consensus 243 ~l~~lc~~~g~llI~DEV~tG~GrtG~~~-a~~~~gv~PDi~---~~gK~~-~~~---g~~~~~~---i~---~~~~-~~ 307 (431)
T TIGR03251 243 AMRALCDEHDALLIFDEVQTGVGLTGTAW-AYQQLGVQPDIV---AFGKKT-QVC---GIMAGRR---VD---EVAD-NV 307 (431)
T ss_pred HHHHHHHHcCCEEEEecchhccCccchHH-HHHhcCCCCCEE---EecccC-ccc---eEEecch---HH---Hhhh-hc
Confidence 68999999999999999999987665321 111122222233 578974 222 5554432 11 0110 00
Q ss_pred hhhHHhhhhhhhhccCcchHHHHHHHHhhhcHH-HHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCCC
Q 047983 82 ISLNMRMDDYLLLSESVYTTVGAVPQILEKTEE-EFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSED 160 (233)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~ 160 (233)
. ........+++.++...+++.+.+ +.-.+ ...++.++.-+..++.+.+..++.+++....... |.++.
T Consensus 308 ~--~~~~~~~~T~~gnpl~~aaa~a~L-~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vrg~-G~~~~------ 377 (431)
T TIGR03251 308 F--AVPSRLNSTWGGNLVDMVRATRIL-EIIEEERLVDNARVQGAHLLARLHELAAEFPHLVSNPRGR-GLMCA------ 377 (431)
T ss_pred c--cCccccCCCCCCCHHHHHHHHHHH-HHHHhcCHHHHHHHHHHHHHHHHHHHHHhCccceeccccc-ceeEE------
Confidence 0 000011222333322322333333 21111 2223333333333344433333344232223344 44444
Q ss_pred cccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEee--cCHHHHHHHHHHHHH
Q 047983 161 KCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFA--VEPSAFEIGLGRMKA 224 (233)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~--~~~~~l~~~~~~l~~ 224 (233)
+.++.. +....+.+.+.++||.+.|.. .+.+|++.. .++++++++++.|.+
T Consensus 378 ---i~~~~~------~~~~~~~~~l~~~Gvl~~~~g----~~~lr~~P~l~~t~~eid~~l~~l~~ 430 (431)
T TIGR03251 378 ---FDLPST------ADRDEVIRQLYREGVLLLGCG----ERSIRFRPPLTVTREEIDAAIDAIRR 430 (431)
T ss_pred ---EEeCCH------HHHHHHHHHHHhCCeEEecCC----CCeEEEECCccCCHHHHHHHHHHHHh
Confidence 334311 133445555668899998743 256777555 489999999998875
No 272
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=98.79 E-value=1.1e-07 Score=84.64 Aligned_cols=59 Identities=14% Similarity=0.077 Sum_probs=42.4
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecC
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD 66 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~ 66 (233)
+|.++|++||+++|.||++..+..++........+.++ +.+++|.++ .|+.+|.+++++
T Consensus 208 ~l~~lc~~~g~lLI~DEv~tG~~~~~~g~~~~~gv~PD-----i~t~gK~lg-gG~p~~av~~~~ 266 (431)
T PRK06209 208 EVRRLCHENGALFILDEMITGFRWHMRGAQKLYGIVPD-----LSCFGKALG-NGFAVSALAGKR 266 (431)
T ss_pred HHHHHHHHcCCEEEEEcccccCCcCcchhhHHhCCCcc-----eeeehhhhc-CCcccEEEEEHH
Confidence 68999999999999999998875432111111222232 578899966 478999999987
No 273
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=98.79 E-value=4.4e-07 Score=80.18 Aligned_cols=114 Identities=14% Similarity=0.123 Sum_probs=69.3
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceE-EEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRL-GWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~-G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|+++|+++|+++|+|++|....+.. ++ .++ .-+++.|++|.++..|.++ ||+++++ +.+.
T Consensus 175 ~~I~~la~~~g~~vivD~a~a~~~~~~----~~-~~g---aDivv~S~tK~l~g~g~~~gG~v~~~~--~~~~------- 237 (403)
T PRK07810 175 AAVSELAHAAGAKVVLDNVFATPLLQR----GL-PLG---ADVVVYSGTKHIDGQGRVLGGAILGDR--EYID------- 237 (403)
T ss_pred HHHHHHHHHcCCEEEEECCCCccccCC----hh-hcC---CcEEEccCCceecCCcCceeEEEEeCh--HHHH-------
Confidence 378999999999999999998644322 12 122 2388999999999999998 7777765 2221
Q ss_pred hhhhhHHhhhhhh-hhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCc
Q 047983 80 HSISLNMRMDDYL-LLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCI 141 (233)
Q Consensus 80 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 141 (233)
..++.+. ..+...++..+++ .+ ..-+.+..+.++..++...+.+.|++.|.+
T Consensus 238 ------~~l~~~~~~~g~~~s~~~a~l-~l---~~L~tl~~R~~~~~~~a~~~a~~L~~~p~v 290 (403)
T PRK07810 238 ------GPVQKLMRHTGPALSAFNAWV-LL---KGLETLALRVRHSNASALRIAEFLEGHPAV 290 (403)
T ss_pred ------HHHHHHHHHhCCCCCHHHHHH-HH---hccCcHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 1222221 1222222221111 11 122345666666777777788888876544
No 274
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=98.78 E-value=2.4e-07 Score=82.22 Aligned_cols=58 Identities=17% Similarity=0.207 Sum_probs=45.9
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecC
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD 66 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~ 66 (233)
++|+++|+++|+++|+|++|..... ..++ .....+++.|+||.++++|+|+||+++++
T Consensus 162 ~~I~~la~~~~i~livD~t~~~~~~----~~~l----~~g~Divv~S~sK~l~g~G~~lGg~v~~~ 219 (418)
T TIGR01326 162 EAIAEVAHAHGVPLIVDNTFATPYL----CRPI----DHGADIVVHSATKYIGGHGTAIGGVIVDG 219 (418)
T ss_pred HHHHHHHHHcCCEEEEECCCchhhc----CCch----hcCCeEEEECccccccCCccceEEEEEec
Confidence 4789999999999999999974311 1111 12456999999999999999999999965
No 275
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.77 E-value=2.8e-07 Score=82.79 Aligned_cols=196 Identities=13% Similarity=0.067 Sum_probs=100.7
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCcc-ccccccCCccCEEEEccCccccCCCC-ceEEEEEecCCCccccccchhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHF-VPMGVFGSIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G-~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
+|.++|++||+++|.||+...|..+|... .....+.++ +-+++|..+ .| +.+|.+++++ ++.+. +..
T Consensus 249 ~lr~lc~~~g~llI~DEV~TG~GRtG~~~a~~~~gv~PD-----iv~~gK~l~-gG~~Pi~av~~~~--ei~~~--~~~- 317 (460)
T PRK06916 249 GLRNLCTKYNVLFITDEVATGFGRTGKMFACEHENVTPD-----IMTAGKGLT-GGYLPIAITVTTD--EIYNA--FYG- 317 (460)
T ss_pred HHHHHHHHcCCEEEeechhhCCCcCchhhHHHhcCCCCC-----eeeeehhhh-cCccccceeeecH--HHHHH--hhc-
Confidence 68899999999999999999986555321 111222232 347899855 57 5999999987 34321 100
Q ss_pred hhhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhc---CCCcccccCCCccEEEEEe
Q 047983 80 HSISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKE---IPCITCPKKPEGSMFVMYC 156 (233)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~---~~~~~~~~~~~~g~~~~~~ 156 (233)
. ...........+++.++...+++++.+ +.-.++ ...+.++++-+++.+.|++ .+.+.. ....|.+ +-
T Consensus 318 ~-~~~~~~~~~~~T~~gnpl~~aaa~a~l-~~l~~~---~l~~~~~~~g~~l~~~l~~l~~~~~v~~-vrG~Glm-~g-- 388 (460)
T PRK06916 318 D-YEEQKTFFHGHSYTGNPLGCAVALANL-ELYEKT---NLIEQVARKTEYVATQLEDLFALKHVGD-IRQLGLM-VG-- 388 (460)
T ss_pred c-ccccCccccCCCCCCCHHHHHHHHHHH-HHHHhc---cHHHHHHHHHHHHHHHHHHhhcCCCeEE-eecCCce-ee--
Confidence 0 000000111122332222222333333 111111 2233344444444444443 222221 2333433 33
Q ss_pred cCCCcccccccccc--cCCCC---ChHHHHHHHHhccCEEEECCcccCCCCcEEEE--eecCHHHHHHHHHHHHHHHHHH
Q 047983 157 GSEDKCLLKLNYSL--LEGIN---SDTEFALKLAKEESIIVLPGITVGLKDWLRIT--FAVEPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 157 ~~~~~~~~~~~~~~--~~~~~---~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~--~~~~~~~l~~~~~~l~~~l~~~ 229 (233)
+.+..+. ..... +....+...+.++||.+.|.. +.+|+. +..+++++++++++|.+.+++.
T Consensus 389 -------iel~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g-----~~l~~~Ppl~it~~~id~~~~~l~~~l~~~ 456 (460)
T PRK06916 389 -------IELVKNKETKEPFEWTERVGVQVCKRSRELGMLTRPLG-----NTIVFMPPLASTIDELDEMLRILYKAISDV 456 (460)
T ss_pred -------EEeecccccccCCCchhhHHHHHHHHHHHCCeEEEecC-----CEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 2221110 00000 012345556668899998742 467775 4459999999999999999765
No 276
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=98.76 E-value=1.8e-07 Score=81.60 Aligned_cols=127 Identities=17% Similarity=0.125 Sum_probs=76.8
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCC-ceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|+++|+++|+++|+|++|..-.+. .++ ....+ +++.|++|.++..| .=.||+++++. ++.
T Consensus 156 ~~I~~la~~~gi~vvvD~t~~~~~~~----~pl-~~gaD---ivv~S~tK~l~g~~d~~gG~v~~~~~-~l~-------- 218 (364)
T PRK07269 156 EKVAKLAHAKGAKVIVDNTFYSPIYQ----RPI-ELGAD---IVLHSATKYLSGHNDVLAGVVVTNDL-ELY-------- 218 (364)
T ss_pred HHHHHHHHHcCCEEEEECCCcccccC----Cch-hhCCc---EEEecCceeccCCCcccceEEEeCcH-HHH--------
Confidence 47899999999999999997642211 122 22332 88999999887533 23478887653 233
Q ss_pred hhhhhHHhhhhhh-hhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcc-cccCCCccEEEE
Q 047983 80 HSISLNMRMDDYL-LLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCIT-CPKKPEGSMFVM 154 (233)
Q Consensus 80 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~~~g~~~~ 154 (233)
.+++... ..+...++..+++.. ..-+.+..+.++.+++...+.+.|++.|.+. +++++.||++.+
T Consensus 219 ------~~~~~~~~~~G~~~s~~~a~l~~----~~L~tL~~r~~~~~~na~~~a~~L~~~p~v~~v~ypg~gg~~sf 285 (364)
T PRK07269 219 ------EKLFYNLNTTGAVLSPFDSYLLM----RGLKTLSLRMERSTANAQEVVAFLKKSPAVKEVLYTGKGGMISF 285 (364)
T ss_pred ------HHHHHHHHHhCCCCCHHHHHHHH----cCCCcHHHHHHHHHHHHHHHHHHHHhCCCccEEeCCCcCcEEEE
Confidence 2232221 122222222122211 1223466777777889999999998876543 334777888777
No 277
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=98.75 E-value=3.2e-07 Score=81.55 Aligned_cols=189 Identities=12% Similarity=0.139 Sum_probs=106.1
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccc--cccCCccC-EEEEccCccccCCCCceEEEEE-ecCCCccccccch
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPM--GVFGSIVP-VLTLGSISKRWIVPGWRLGWLV-TSDPNGILQDLGV 76 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~--~~~~~~~~-~i~~~s~sK~~~~~G~R~G~~~-~~~~~~~~~~~~~ 76 (233)
++|.++|++||+++|+|++|+.... ....+ ..... ++ .+++.|++|.+..||+ |+++ ++++ +++
T Consensus 225 ~eIa~la~k~gI~lIvDaAyg~~~~---~~~~~~~~g~~~-Grad~vv~s~hK~l~~pg~--Gg~I~~~d~-el~----- 292 (444)
T TIGR03531 225 EEIAKICANYDIPHIVNNAYGLQSN---KYMELINKAIKV-GRVDAVVSSTDKNFMVPVG--GAIIYSFDE-NFI----- 292 (444)
T ss_pred HHHHHHHHHcCCEEEEECcCcCcCh---hhhhhhhccccc-cCCCeEEEeCccCCCCCCC--EEEEEECCH-HHH-----
Confidence 4799999999999999999996221 11111 11111 12 3667799999888887 6655 5443 333
Q ss_pred hhhhhhhhHHhhhhhhhhccCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCC---CcccccCCCccEE
Q 047983 77 AFFHSISLNMRMDDYLLLSESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIP---CITCPKKPEGSMF 152 (233)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~---~~~~~~~~~~g~~ 152 (233)
..+....... ...++. .+...++ ....+.++++.+...++++++.+.|+++. +......|+..+-
T Consensus 293 ---------~~i~~~y~g~-~~~s~~~~~~~~ll-~~G~~g~~~li~~~~~~a~~l~~~L~~l~~~~~~~~~~~~~n~is 361 (444)
T TIGR03531 293 ---------QEISKSYPGR-ASASPSLDVLITLL-SLGSKGYLELLKERKEMYKYLKELLQKLAERHGERLLDTPENPIS 361 (444)
T ss_pred ---------HHHHHhccCC-CCChHHHHHHHHHH-HhCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcEeecCCCCcee
Confidence 2222211111 112222 3333333 33457788888889999999988887742 3333345555555
Q ss_pred EEEecCCCcccccccccccCCCCChHHHHHHHHhccCE---E-EECCc-------ccCC---------CCcEEE--Eeec
Q 047983 153 VMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESI---I-VLPGI-------TVGL---------KDWLRI--TFAV 210 (233)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi---~-v~pg~-------~f~~---------~~~~Rl--~~~~ 210 (233)
+. +.+. .+.+ .+...+--+|-.++| . |.||. .|.. ..|+-+ +++.
T Consensus 362 ~~---------~~~~--~~~~--~~~~~~g~~l~~~~v~g~r~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~g~ 428 (444)
T TIGR03531 362 SA---------MTLS--TLKG--KDPTMLGSMLYSRRVTGPRVVTNGDSKTVGGCEFKGYGSHTSNYPCPYITAAAAIGM 428 (444)
T ss_pred EE---------Eecc--cccc--cCHHHHHHHHHhCCCCCceeecCCCceEECCEEeecccccccCCCchhHHHHHHhCC
Confidence 55 2232 2111 133333344434443 3 34566 3421 235544 3445
Q ss_pred CHHHHHHHHHHHHHH
Q 047983 211 EPSAFEIGLGRMKAF 225 (233)
Q Consensus 211 ~~~~l~~~~~~l~~~ 225 (233)
+.++++..+++|.+.
T Consensus 429 ~~~~~~~~~~~l~~~ 443 (444)
T TIGR03531 429 TKEDVDTFVSRLEKS 443 (444)
T ss_pred cHHHHHHHHHHHhhc
Confidence 889999999999865
No 278
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=98.73 E-value=6.4e-07 Score=77.22 Aligned_cols=194 Identities=18% Similarity=0.153 Sum_probs=99.0
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCc--cccCCCCceEEEEEecCCCccccccchhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSIS--KRWIVPGWRLGWLVTSDPNGILQDLGVAF 78 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~R~G~~~~~~~~~~~~~~~~~~ 78 (233)
++|.++|+++|+++|+|++++........ ++ +.. ..+.+.|++ |.+ ++.+.|+++++++ ++.+.+....
T Consensus 123 ~~i~~l~~~~~i~li~D~a~~~g~~~~~~--~~---~~~-~d~~~~S~~~~K~~--~~~~gg~~~~~~~-~~~~~~~~~~ 193 (352)
T cd00616 123 DAIMAIAKRHGLPVIEDAAQALGATYKGR--KV---GTF-GDAGAFSFHPTKNL--TTGEGGAVVTNDE-ELAERARLLR 193 (352)
T ss_pred HHHHHHHHHcCCeEEEECCCCCCCeECCE--Ec---ccC-cceeEEcCCCCCCC--cccCceEEEECCH-HHHHHHHHHH
Confidence 47899999999999999999853221111 11 111 124566765 876 3445688888753 2332111100
Q ss_pred hhhhhhHH-hhhh-hhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCc---c-EE
Q 047983 79 FHSISLNM-RMDD-YLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEG---S-MF 152 (233)
Q Consensus 79 ~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~---g-~~ 152 (233)
.+...... +... ....+...+....+++. ...+.+++..++.+++.+++.+.|++++++..+..+.. . ..
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~----~~l~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~ 269 (352)
T cd00616 194 NHGRDRDRFKYEHEILGYNYRLSEIQAAIGL----AQLEKLDEIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHL 269 (352)
T ss_pred HcCCCCCCCccccceeeeccCcCHHHHHHHH----HHHHhhHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEE
Confidence 00000000 0000 00001111111111111 12234566777778899999999988777664333321 1 22
Q ss_pred EEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC-------------------------CCcEEEE
Q 047983 153 VMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL-------------------------KDWLRIT 207 (233)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~-------------------------~~~~Rl~ 207 (233)
+. +.++.. .+ .+.+.+.+.|.++||.+.. .+.+ .+.+|++
T Consensus 270 ~~---------~~~~~~--~~--~~~~~v~~~L~~~gI~~~~--~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~l~ 334 (352)
T cd00616 270 YV---------IRLDPE--AG--ESRDELIEALKEAGIETRV--HYPPLHHQPPYKKLLGYPPGDLPNAEDLAERVLSLP 334 (352)
T ss_pred EE---------EEECCc--CC--CCHHHHHHHHHHCCCCeee--ecCccccCHhhhhccCCCcCCChHHHHHHhCeEEcc
Confidence 22 222210 01 1555666677888996642 1211 2579998
Q ss_pred eec--CHHHHHHHHHHH
Q 047983 208 FAV--EPSAFEIGLGRM 222 (233)
Q Consensus 208 ~~~--~~~~l~~~~~~l 222 (233)
+.. ++++++..++.|
T Consensus 335 ~~~~~t~~di~~i~~~l 351 (352)
T cd00616 335 LHPSLTEEEIDRVIEAL 351 (352)
T ss_pred CCCCCCHHHHHHHHHHh
Confidence 886 788888777765
No 279
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=98.73 E-value=3.8e-07 Score=79.47 Aligned_cols=173 Identities=10% Similarity=0.095 Sum_probs=97.5
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHS 81 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~ 81 (233)
+|.++|++||+++|+||+...+ ..|.-. .....+-.+. +-+++|.++. |+++|.++.+. ++ .
T Consensus 187 ~lr~lc~~~gillI~DEv~tG~-RtG~~~-a~~~~gv~PD---iv~~gK~lgg-G~P~~a~~~~~--~~------~---- 248 (364)
T PRK04013 187 TLRDLTEDVGALLIADEVQSGL-RTGKFL-AIEHYKVEPD---IVTMGKGIGN-GVPVSLTLTNF--DV------E---- 248 (364)
T ss_pred HHHHHHHHcCCEEEEechhhcC-CCCchh-HHHhcCCCCC---EEEecccccC-CceeEEEEecc--cc------c----
Confidence 6889999999999999999998 665321 1211222222 4466999665 89999999876 22 1
Q ss_pred hhhHHhhhhhhhhccCcchHHHHHHHHhhhc-HHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCCC
Q 047983 82 ISLNMRMDDYLLLSESVYTTVGAVPQILEKT-EEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSED 160 (233)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~ 160 (233)
. .....+++.++...+++.+.+ +.- .++.+++.++. + +.+.. +.+.. .... |.++-
T Consensus 249 ----~-~~~~~T~~gnp~~~aaa~a~l-~~i~~~~l~~~~~~~-------l-~~l~~-~~v~~-vRG~-Gl~~g------ 305 (364)
T PRK04013 249 ----R-GKHGSTFGGNPLACKAVAVTL-RILRRERLVEKAGEK-------F-IEIKG-ERVVT-TRGR-GLMIG------ 305 (364)
T ss_pred ----C-CCcCCCCCcCHHHHHHHHHHH-HHHHhccHHHHHHHH-------H-HHhcc-Cccee-eeeC-cEEEE------
Confidence 1 112223333233322333332 211 11223332222 2 22222 22211 2233 55555
Q ss_pred cccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEee--cCHHHHHHHHHHHHHHHHHHh
Q 047983 161 KCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFA--VEPSAFEIGLGRMKAFYYRHA 230 (233)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~--~~~~~l~~~~~~l~~~l~~~~ 230 (233)
+.+. . ....+.+.+.++|+.+.+.. .+.+|+... .+++++++++++|.+.+.+.-
T Consensus 306 ---ve~~--~------~~~~i~~~~~~~Gll~~~~g----~~vlr~~Ppl~it~~~i~~~~~~l~~~l~~~~ 362 (364)
T PRK04013 306 ---IVLK--K------PVGKYVEELQNRGYLVHTAG----QRVIRLLPPLIISKDTMEEAKSAIEGVINDIL 362 (364)
T ss_pred ---EEeC--C------cHHHHHHHHHhCCcEEeeCC----CCEEEEeCCcccCHHHHHHHHHHHHHHHHHHh
Confidence 3332 1 23344555667899997632 367888665 489999999999999998653
No 280
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=98.69 E-value=3.1e-07 Score=87.21 Aligned_cols=197 Identities=13% Similarity=0.079 Sum_probs=100.0
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCC-ceEEEEEecCCCccccccchhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
+|.++|++||+++|.||+...|...|.-+ ....++-. --|-+++|.. ..| +++|.+++++ ++++. +.
T Consensus 610 ~lr~lc~~~gilLI~DEV~TGfGRtG~~f-a~e~~gv~---PDIi~~gKgL-tgG~~Plaa~l~~~--~I~~~--f~--- 677 (817)
T PLN02974 610 ALVQVCRSRKIPVIFDEVFTGLWRLGVES-AWELLGCK---PDIACYAKLL-TGGLVPLAATLATE--EVFEA--FR--- 677 (817)
T ss_pred HHHHHHHHhCCEEEEeecccCCCcccchh-hHHhcCCC---CCEEeecccc-cCCCCccEEEEEcH--HHHHh--hc---
Confidence 68999999999999999999998777422 11112221 2255889984 458 6999999987 44431 10
Q ss_pred hhhhHHhhhhhhhhccCcchHHHHHHHH--hhhc-HHHHHHHHHHHHHHHH-HHHHHHhhcCCCcccccCCCccEEEEEe
Q 047983 81 SISLNMRMDDYLLLSESVYTTVGAVPQI--LEKT-EEEFFSKITDILREAA-DICCDRLKEIPCITCPKKPEGSMFVMYC 156 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~~~-~~~~~~~~~~~~~~~~-~~l~~~L~~~~~~~~~~~~~~g~~~~~~ 156 (233)
.......+.+..+++.++..-+++++.+ ++.. ..+.+.+..+.+.+.. +.+.+.|.+.+.+.. +... |.++-
T Consensus 678 ~~~~~~~~~hg~Ty~gnpl~cAaala~L~~~~~~~~~~~l~~~~~~l~~~l~~~l~~~l~~~p~V~~-VRg~-Gl~~~-- 753 (817)
T PLN02974 678 GPSKLDALLHGHSYTAHPMGCAAAAKALQWYKDPSTNPNLIPPGSRLRELWDEELVRAISSLPNVER-VVSL-GTVLA-- 753 (817)
T ss_pred cccccCCcccCCCCCcCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeE-EEee-eeEEE--
Confidence 0000001112223333333322444433 1111 1112222222222222 233233444443322 2333 44444
Q ss_pred cCCCccccccccccc-CCC-CChHHHHHHHHh-ccCEEEECCcccCCCCcEEEEee--cCHHHHHHHHHHHHHHH
Q 047983 157 GSEDKCLLKLNYSLL-EGI-NSDTEFALKLAK-EESIIVLPGITVGLKDWLRITFA--VEPSAFEIGLGRMKAFY 226 (233)
Q Consensus 157 ~~~~~~~~~~~~~~~-~~~-~~~~~~~~~ll~-~~gi~v~pg~~f~~~~~~Rl~~~--~~~~~l~~~~~~l~~~l 226 (233)
+.+..... .+. ......+.+.+. ++||.++|.. +.+|+... .+++++++.++.|.+.|
T Consensus 754 -------iel~~~~~~~~~~~~~a~~v~~~~~~~~Gl~~r~~G-----nvi~l~pP~~i~~e~l~~~~~~l~~~~ 816 (817)
T PLN02974 754 -------LELDAEGSGSGYSSLYARSVVRRLRREDGIYARPLG-----NVVYLMCGPTTSPETCTRLLRKVYRRL 816 (817)
T ss_pred -------EEEecCCcccccchHHHHHHHHHHHHhCCEEEEecC-----CEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence 23321100 010 011234444555 8899999842 67776433 48999999999998765
No 281
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=98.64 E-value=3.8e-07 Score=81.71 Aligned_cols=181 Identities=13% Similarity=0.089 Sum_probs=89.8
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCcc-ccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHF-VPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
+|.++|++||+++|.||+...|..+|..+ .....+..... +.+++|.++..| ++++.+ .+.. .
T Consensus 276 ~lr~lc~~~g~lLI~DEV~tGfGrtG~~fa~e~~gv~~~PD---i~t~gK~lg~gG----~~~~~~---~~~~---~--- 339 (464)
T TIGR00699 276 KLRDITKKHNVAFIVDEVQTGVGATGKFWAHEHWNLDDPPD---MVTFSKKFQTAG----YFFHDP---AFRP---N--- 339 (464)
T ss_pred HHHHHHHHcCCEEEEeeeeeCCCCCcchhHHHhcCCCCCCC---EEEehhhhccCC----ccccch---hccC---C---
Confidence 68999999999999999999986655321 11112221112 467899864444 333332 1110 0
Q ss_pred hhhhHHhhhhhhhhccCcchHHHHHHHH--hhh-cHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccC--CCccEEEEE
Q 047983 81 SISLNMRMDDYLLLSESVYTTVGAVPQI--LEK-TEEEFFSKITDILREAADICCDRLKEIPCITCPKK--PEGSMFVMY 155 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~--~~~g~~~~~ 155 (233)
.......+++.++...+++.+.+ ++. +..+...++-+.+++..+.+. ++++....-.. .. |.++-
T Consensus 340 -----~~~~~~~T~~gnp~~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~---~~~~~~i~~vRg~G~-Glm~g- 409 (464)
T TIGR00699 340 -----KPYRQFNTWMGDPSRALILREIIQEIKRKDLLENVAHVGDYLYTGLEDLQ---KKYPEFIQNLRGKGR-GTFIA- 409 (464)
T ss_pred -----CCcccccCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH---HhCCCceeeecccCe-EEEEE-
Confidence 11112223332222222333332 111 111222222233333222221 22432211122 33 44444
Q ss_pred ecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEee--cCHHHHHHHHHHHHHHH
Q 047983 156 CGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFA--VEPSAFEIGLGRMKAFY 226 (233)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~--~~~~~l~~~~~~l~~~l 226 (233)
+.++.+ .....+.+.+.++||.+.+. ..+.+|+... .+++++++++++|.+.+
T Consensus 410 --------ie~~~~------~~~~~i~~~~~~~Gvl~~~~----g~~~ir~~Ppl~it~~eid~~~~~l~~~~ 464 (464)
T TIGR00699 410 --------WDTPDE------AKRDKLLKKARNNGVNIGGC----GVKAIRLRPMLVFQKHHADIFLEIISKII 464 (464)
T ss_pred --------EecCCH------HHHHHHHHHHHHCCcEEecC----CCCeEEEeCCCCCCHHHHHHHHHHHHHhC
Confidence 333211 12445556666789999763 2367888766 38999999999998753
No 282
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=98.63 E-value=1.3e-06 Score=76.40 Aligned_cols=200 Identities=15% Similarity=0.165 Sum_probs=98.7
Q ss_pred ChHHHHHHHcCcEEEEccccCccc-cCCCccccccccCCccCEEEEccCc--cccCCCCceEEEEEecCCCccccccchh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLV-FGNTHFVPMGVFGSIVPVLTLGSIS--KRWIVPGWRLGWLVTSDPNGILQDLGVA 77 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~-~~~~~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~R~G~~~~~~~~~~~~~~~~~ 77 (233)
++|+++|++||++||+|++|+.+. +++.. +..+.. +.+.||. |.+ .+|.+.++++.++ ++.+++...
T Consensus 136 ~~i~~la~~~~i~vIeD~a~a~g~~~~~~~---~g~~~~----~~~~Sf~~~K~l-~~g~gG~~~~~~~--~~~~~~~~~ 205 (375)
T PRK11706 136 DTIMALAKKHNLFVVEDAAQGVMSTYKGRA---LGTIGH----IGCFSFHETKNY-TAGEGGALLINDP--ALIERAEII 205 (375)
T ss_pred HHHHHHHHHcCCEEEEECccccccccCCee---eecCcC----EEEEeCCCCccc-cccCCeEEEECCH--HHHHHHHHH
Confidence 378999999999999999999875 33321 211111 2233333 986 4587877777655 454322111
Q ss_pred hhhhhhhHHhhh----hhhhhccCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCC---CcccccCCCc
Q 047983 78 FFHSISLNMRMD----DYLLLSESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIP---CITCPKKPEG 149 (233)
Q Consensus 78 ~~~~~~~~~~~~----~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~---~~~~~~~~~~ 149 (233)
+.+..+...... .+.....+.+... ...+++..... +.+++..+.-+++.+...+.|+.++ .+..+..|.+
T Consensus 206 ~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~ql-~~l~~~~~~R~~~~~~~~~~L~~~~~~~~~~~~~~~~~ 284 (375)
T PRK11706 206 REKGTNRSQFFRGQVDKYTWVDIGSSYLPSELQAAYLWAQL-EAADRINQRRLALWQRYYDALAPLAEAGRIELPSIPDD 284 (375)
T ss_pred HHcCCCcchhhccCCCcceeeecccccCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCCcCCeeecCCCCCC
Confidence 111000000000 0000011122111 23333321121 2355566666667777777777654 2221112222
Q ss_pred ----cEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCc----c-------------cCC-----CCc
Q 047983 150 ----SMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGI----T-------------VGL-----KDW 203 (233)
Q Consensus 150 ----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~----~-------------f~~-----~~~ 203 (233)
.++.| +.++.. .+.+.+.+.|.++||.+.+.. . |.. ..-
T Consensus 285 ~~~~~~~~~---------~~~~~~------~~r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~a~~~~~~~ 349 (375)
T PRK11706 285 CKHNAHMFY---------IKLRDL------EDRSALINFLKEAGIMAVFHYIPLHSSPAGERFGRFHGEDRYTTKESERL 349 (375)
T ss_pred CceeeEEEE---------EEECCc------CCHHHHHHHHHHCCCCccccCCccCcchhhHhcCCCCCCChHHHHHHhCc
Confidence 22445 334321 156677777888899875321 0 100 233
Q ss_pred EEEEeec--CHHHHHHHHHHHHHHH
Q 047983 204 LRITFAV--EPSAFEIGLGRMKAFY 226 (233)
Q Consensus 204 ~Rl~~~~--~~~~l~~~~~~l~~~l 226 (233)
+.+.+.. ++++++..++.|++++
T Consensus 350 l~lP~~~~l~~~~~~~i~~~i~~~~ 374 (375)
T PRK11706 350 LRLPLFYNLTDVEQRTVIDTILEFF 374 (375)
T ss_pred EeccCCCCCCHHHHHHHHHHHHHHh
Confidence 4444443 6777788777777654
No 283
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=98.62 E-value=3e-06 Score=74.89 Aligned_cols=193 Identities=11% Similarity=0.014 Sum_probs=99.7
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCcccc-CCCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRW-IVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|.++|+++|+++++|++++. |..+..+..+ +--+++.|..|.+ +.|| .|..+.++...-... .+.-.
T Consensus 191 ~~i~~~~~~~g~~~~vD~aq~~----G~~~id~~~~---gvD~~~~s~hK~l~g~pG--~~l~v~~~~~~~~~p-~~~g~ 260 (406)
T TIGR01814 191 AAITRAAHAKGALVGFDLAHAV----GNVPLDLHDW---GVDFACWCTYKYLNAGPG--AGAFVHEKHAHTERP-RLAGW 260 (406)
T ss_pred HHHHHHHHHcCCEEEEEccccc----CCcccccccC---CCCEEEEcCccccCCCCC--eEEEEehhhhhhcCC-CCCcc
Confidence 3789999999999999999997 3222233222 2338899999975 4667 443333331000100 00000
Q ss_pred hhhh----hH--Hhhhh-hhhhccC-cchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcC----CCcccccC
Q 047983 80 HSIS----LN--MRMDD-YLLLSES-VYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEI----PCITCPKK 146 (233)
Q Consensus 80 ~~~~----~~--~~~~~-~~~~~~~-~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~~~ 146 (233)
.... .. ..... ...+..+ ++... .++.+.++...+.-.++.+++.++..+++.+.|+++ +++.. ..
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~i-~~ 339 (406)
T TIGR01814 261 WGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQAGMEALRKKSLLLTDYLEELIKARCGGPPVLTI-IT 339 (406)
T ss_pred cCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCceEE-eC
Confidence 0000 00 00000 0001112 22222 333333322112224666777777777887777664 23432 22
Q ss_pred C-----CccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEee--c-CHHHHHHH
Q 047983 147 P-----EGSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFA--V-EPSAFEIG 218 (233)
Q Consensus 147 ~-----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~--~-~~~~l~~~ 218 (233)
| .+++. . +.++ . +.+.+.+.|.++||.+... ..+.+|+|++ . ++++++.+
T Consensus 340 ~~~~~~r~~~v-~---------~~~~--~------~~~~~~~~L~~~gi~v~~~----~~~~iRiS~~~~~nt~~did~l 397 (406)
T TIGR01814 340 PRDHAQRGCQL-S---------LTHP--V------PGKAVFQALIKRGVIGDKR----EPSVIRVAPVPLYNTFVDVYDA 397 (406)
T ss_pred CCChhhcCCeE-E---------EEec--C------CHHHHHHHHHHCCEEEecc----CCCeEEEechhccCCHHHHHHH
Confidence 2 12333 3 2232 1 2334555566789987532 2368999984 3 89999999
Q ss_pred HHHHHHHH
Q 047983 219 LGRMKAFY 226 (233)
Q Consensus 219 ~~~l~~~l 226 (233)
++.|++++
T Consensus 398 ~~~l~~~~ 405 (406)
T TIGR01814 398 VNVLEEIL 405 (406)
T ss_pred HHHHHHHh
Confidence 99998764
No 284
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=98.62 E-value=2.3e-06 Score=75.21 Aligned_cols=113 Identities=13% Similarity=0.091 Sum_probs=64.4
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceE-EEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRL-GWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~-G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|+++|+++|+++|+|++|...... .++. . +.-+++.|+||.++.+|-.+ |++++.+. ++.
T Consensus 157 ~~I~~la~~~gi~livD~t~a~~~~~----~~l~-~---GaDivv~S~sK~l~g~~d~~gG~vi~~~~-~~~-------- 219 (385)
T PRK08574 157 PEVAKAAKELGAILVVDNTFATPLLY----RPLR-H---GADFVVHSLTKYIAGHNDVVGGVAVAWSG-EFL-------- 219 (385)
T ss_pred HHHHHHHHHcCCEEEEECCCCccccC----Chhh-h---CCcEEEeeCceeecCCCCceeEEEEECcH-HHH--------
Confidence 47899999999999999999642211 1221 2 23488999999988777654 76776553 233
Q ss_pred hhhhhHHhhhhhhh-hccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 047983 80 HSISLNMRMDDYLL-LSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPC 140 (233)
Q Consensus 80 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 140 (233)
.+++.... .+...++..++ ++..+ -+.+....++..++...+.+.|++.|.
T Consensus 220 ------~~~~~~~~~~g~~~~p~~a~---l~l~~-l~tL~~R~~~~~~na~~la~~L~~~p~ 271 (385)
T PRK08574 220 ------EELWEWRRRLGTIMQPFEAY---LVLRG-LKTLEVRFERQCRNAMAIAEFLSEHPK 271 (385)
T ss_pred ------HHHHHHHHhcCCCCCHHHHH---HHHcc-cCcHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 33322222 22222222111 11111 122444555556677788888877553
No 285
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=98.62 E-value=2.2e-06 Score=75.14 Aligned_cols=61 Identities=23% Similarity=0.332 Sum_probs=41.6
Q ss_pred ChHHHHHHHcCcEEEEccccCccc-cCCCccccccccCCccCEEEEccCc----cccCCCCceEEEEEecCCCcccc
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLV-FGNTHFVPMGVFGSIVPVLTLGSIS----KRWIVPGWRLGWLVTSDPNGILQ 72 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~-~~~~~~~~~~~~~~~~~~i~~~s~s----K~~~~~G~R~G~~~~~~~~~~~~ 72 (233)
++|+++|++||++||+|++|+... +.+....++ ..+++|| |.+ .+|.+.||++++++ ++.+
T Consensus 136 ~~I~~la~~~~i~vIeDaa~~~g~~~~~~~~g~~---------~~~~~fSf~~~K~l-~~g~~gG~v~~~~~-~~~~ 201 (376)
T TIGR02379 136 DTIMALANKHQLFVIEDAAQGVMSTYKGRALGSI---------GHLGTFSFHETKNY-TSGGEGGALLINDQ-AFIE 201 (376)
T ss_pred HHHHHHHHHCCCEEEEECccccCCccCCcccCCC---------CCEEEEeCCCCCcC-cccCCceEEEECCH-HHHH
Confidence 378999999999999999999865 444322111 1233444 774 56778899999864 4544
No 286
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.61 E-value=9e-07 Score=74.16 Aligned_cols=186 Identities=15% Similarity=0.132 Sum_probs=107.3
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHS 81 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~ 81 (233)
+..++|.+||+++|.||+...+..+|. +.+.+..+..--|--|.|.++..=.++..+.+++ +++
T Consensus 232 ~vreLCtkynvl~I~DEvQTGl~RTGk----~la~d~env~PDivilgKalSGG~~Pvsavl~~~--~im---------- 295 (427)
T KOG1402|consen 232 KVRELCTKYNVLLIADEVQTGLARTGK----LLACDYENVRPDIVILGKALSGGVYPVSAVLADD--DIM---------- 295 (427)
T ss_pred HHHHHHHhhcEEEEehhhhhcccccCc----EEEeehhhcCCCeEEEeccccCCeeeeEEEEecH--HHH----------
Confidence 467999999999999999999988873 3333331111123346788777778888888887 333
Q ss_pred hhhHHhhhhh-hhhccCcchHH--HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhc----CCCcccccCCCccEEEE
Q 047983 82 ISLNMRMDDY-LLLSESVYTTV--GAVPQILEKTEEEFFSKITDILREAADICCDRLKE----IPCITCPKKPEGSMFVM 154 (233)
Q Consensus 82 ~~~~~~~~~~-~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~~~~~~g~~~~ 154 (233)
..+... .+.+.+.++.. .++|++- --.++-+.++... .-..|+..|++ +|.+..-+... |++.-
T Consensus 296 ----~~~~pgeHgsTyggNpLg~~vaiAale-vi~eekL~era~~---lG~~l~~~L~~l~~~~p~~v~~VRGr-Gl~~a 366 (427)
T KOG1402|consen 296 ----LNIKPGEHGSTYGGNPLGCAVAIAALE-VIVEEKLVERAAK---LGEILRDQLNKLQKKFPHVVKEVRGR-GLLNA 366 (427)
T ss_pred ----hccCCCccccccCCChHHHHHHHHHHH-HHHHHHHHHHHHH---HHHHHHHHHHhccccccchhheeecc-ceEEE
Confidence 222211 12233344444 6666651 1223323333333 33344444444 33333212222 56655
Q ss_pred EecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEee--cCHHHHHHHHHHHHHHHH
Q 047983 155 YCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFA--VEPSAFEIGLGRMKAFYY 227 (233)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~--~~~~~l~~~~~~l~~~l~ 227 (233)
+.++.....+ .+.++.++ .++++|++..|.. .+-+|++-. .++++++++++.+.+.+.
T Consensus 367 ---------i~i~~~~~~~-~~aw~~cl-~lk~~g~LAkptH----~~IiRfaPPL~I~e~dl~eg~e~i~k~i~ 426 (427)
T KOG1402|consen 367 ---------IVINPSKTSG-QDAWDVCL-ALKENGLLAKPTH----GNIIRFAPPLVISEEDLREGIEAIEKTIA 426 (427)
T ss_pred ---------EEeccccccc-hhHHHHHH-cccccccccCCCC----CCeEEecCCcccCHHHHHHHHHHHHHHhc
Confidence 4443222111 13445554 4678899998865 267888655 389999999999988764
No 287
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=98.59 E-value=3.2e-06 Score=75.21 Aligned_cols=58 Identities=19% Similarity=0.301 Sum_probs=44.7
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecC
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD 66 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~ 66 (233)
++|.++|+++|++||+|++|..... ..++ ..+. -|++.|++|.++++|.++|.+++.+
T Consensus 163 ~~I~~la~~~~i~vVvD~a~a~~~~----~~p~-~~ga---Divv~S~tK~l~G~g~~~gG~v~~~ 220 (425)
T PRK06084 163 QALADAAHRHGVPLIVDNTVATPVL----CRPF-EHGA---DIVVHSLTKYIGGHGTSIGGIVVDS 220 (425)
T ss_pred HHHHHHHHHcCCEEEEECCCccccc----CChh-hcCC---CEEEECchhcccccccceeEEEEeC
Confidence 4789999999999999999985321 1122 1222 2899999999999999999988854
No 288
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=98.59 E-value=2e-06 Score=75.36 Aligned_cols=112 Identities=14% Similarity=0.037 Sum_probs=65.6
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCC-CCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIV-PGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~-~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|+++|+++|+++|+|++|.... ...++ .+.. -+++.|.+|.++. .|.+.|+++++++ .+.
T Consensus 151 ~~I~~la~~~g~~vivD~a~~~~~----~~~~l-~~g~---Di~v~S~tK~l~G~~~~~~G~v~~~~~-~~~-------- 213 (378)
T TIGR01329 151 RKISEMAHAQNALVVVDNTMMSPL----LCNPL-ELGA---DIVYHSATKFLAGHSDVMAGVLAVKGE-EIA-------- 213 (378)
T ss_pred HHHHHHHHHcCCEEEEECCCcccc----cCChh-hcCC---cEEEEecceeccCCccceeEEEEeCcH-HHH--------
Confidence 478999999999999999985422 11223 2233 2889999997765 4688999998663 222
Q ss_pred hhhhhHHhhhhhhh-hccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 047983 80 HSISLNMRMDDYLL-LSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIP 139 (233)
Q Consensus 80 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 139 (233)
.+++.... .+...++..+ .++ ...-+.+..+.++-.++...+.+.|++.+
T Consensus 214 ------~~~~~~~~~~G~~~~~~~a---~l~-~~~l~tl~~R~e~~~~na~~la~~L~~~~ 264 (378)
T TIGR01329 214 ------KKVYFLQNSTGSGLAPFDC---WLL-LRGIKTLAIRIEKQQENARAIAMFLSTHP 264 (378)
T ss_pred ------HHHHHHHHhcCCcCCHHHH---HHH-HccCCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 23332222 2222222211 221 11223455556666777777777776644
No 289
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=98.58 E-value=4.6e-06 Score=72.45 Aligned_cols=205 Identities=17% Similarity=0.120 Sum_probs=122.6
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCC-CCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIV-PGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~-~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|.++|++||..+|+|-+=+- |.....+ +.+.--+.+.+--|.++. || +|.+..++ ...+.++-.+.
T Consensus 151 ~~I~~~~k~~g~l~iVDaVsS~----Gg~~~~v---d~wgiDv~itgSQK~l~~PPG--la~v~~S~--~a~e~~~~~~~ 219 (383)
T COG0075 151 KEIAKAAKEHGALLIVDAVSSL----GGEPLKV---DEWGIDVAITGSQKALGAPPG--LAFVAVSE--RALEAIEERKH 219 (383)
T ss_pred HHHHHHHHHcCCEEEEEecccC----CCcccch---hhcCccEEEecCchhccCCCc--cceeEECH--HHHHHHhcCCC
Confidence 4799999999999999988775 2233333 344444889999998855 67 57777776 23321111111
Q ss_pred hh--hhhHHhhhhh---hhhccCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEE
Q 047983 80 HS--ISLNMRMDDY---LLLSESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFV 153 (233)
Q Consensus 80 ~~--~~~~~~~~~~---~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~ 153 (233)
.+ .++......+ ..+...++... .++...++.-..+=++...++.+++.+.+++.++.+ ++..+..+ +...
T Consensus 220 ~~~ylDL~~~~~~~~~~~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~al-Gl~~~~~~--~~~s 296 (383)
T COG0075 220 PSFYLDLKKWLKYMEKKGSTPYTPPVNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEAL-GLELFADP--ERRS 296 (383)
T ss_pred CceeecHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCccccCc--ccCC
Confidence 10 1111111111 11122223333 566555543333447888999999999999999987 44333312 1111
Q ss_pred EEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEE-eec-CHHHHHHHHHHHHHHHHHH
Q 047983 154 MYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRIT-FAV-EPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~-~~~-~~~~l~~~~~~l~~~l~~~ 229 (233)
+ -...+..|. ++ ++.+....+++++|+.+.+|..--....+||. ++. ..+++..++..|...+.+.
T Consensus 297 ~-----tvta~~~P~----g~-~~~~~~~~~~~~~g~~i~gg~~~l~gkifRIGhMG~~~~~dv~~~l~ale~~L~~~ 364 (383)
T COG0075 297 P-----TVTAIKVPE----GV-DDKKVRRALLKEYGVEIAGGQGPLKGKIFRIGHMGNVRPEDVLAALAALEAALREL 364 (383)
T ss_pred C-----ceEEEECCC----CC-CcHHHHHHHHHhCCEEecccccccCccEEEEecCccCCHHHHHHHHHHHHHHHHHc
Confidence 1 000133443 33 23344447888889999886544446789994 444 8889999999999999876
No 290
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=98.58 E-value=2.8e-06 Score=72.70 Aligned_cols=190 Identities=19% Similarity=0.153 Sum_probs=109.5
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHS 81 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~ 81 (233)
+..++|+++|.+.|.||+.+.|..+| .+..++.++.+--|-|++|. ...|+.+|.+++++ ++. ...
T Consensus 237 a~~~~v~k~Ggl~IaDEVqtGfGRtG----~~wgfe~h~v~PDIvTmAKg-iGnG~Pl~AVvtt~--EIa---~v~---- 302 (442)
T KOG1404|consen 237 AAYKVVRKRGGLFIADEVQTGFGRTG----HMWGFESHGVVPDIVTMAKG-IGNGFPLGAVVTTP--EIA---DVL---- 302 (442)
T ss_pred HHHHHHHHcCCEEEehhhhhcccccc----ccccccccCCCccHHHHHhh-ccCCCcceeeecCH--HHH---HHH----
Confidence 46789999999999999999998777 46666776777778899999 66789999999998 333 122
Q ss_pred hhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhc-CCCcccccCCCccEEEEEecCCC
Q 047983 82 ISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKE-IPCITCPKKPEGSMFVMYCGSED 160 (233)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~g~~~~~~~~~~ 160 (233)
..+...+++++.++.+-+.+++. ++.-.++.+++...........=..+|++ .+-+.. ++.. |.++-
T Consensus 303 ---~~~~~~fnTyggnP~a~avg~aV-L~Vikee~LqE~aa~vG~yl~~~l~~l~d~h~iIGd-VRG~-GLm~G------ 370 (442)
T KOG1404|consen 303 ---NQKSSHFNTYGGNPVACAVGLAV-LKVIKEENLQENAAEVGSYLLEKLAALKDKHPIIGD-VRGR-GLMLG------ 370 (442)
T ss_pred ---HhccccccccCCCchhHHHHHHH-HHHHHHHhHHHHHHHHHHHHHHHHHHHhhcCCceee-cccc-eeEEE------
Confidence 01222344444433333233333 32223444444444444433333333333 222221 2333 33333
Q ss_pred cccccc-ccc-c-cCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEee--cCHHHHHHHHHHH
Q 047983 161 KCLLKL-NYS-L-LEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFA--VEPSAFEIGLGRM 222 (233)
Q Consensus 161 ~~~~~~-~~~-~-~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~--~~~~~l~~~~~~l 222 (233)
+++ +.. + .++.......+-+..+++|+.|--|+.+| +.+||+-. .+.++++-+..-.
T Consensus 371 ---vE~V~dk~~~~pp~~~~~~~i~~~cke~Gvlvg~g~i~G--~vfriaPPlciT~edi~f~~~~~ 432 (442)
T KOG1404|consen 371 ---VELVSDKSEPKPPATAEGAVIGEQCKELGVLVGKGGIHG--NVFRIAPPLCITKEDIDFAVEYF 432 (442)
T ss_pred ---EEEecccCCCCCcchHHHHHHHHHHHHhCeeeecccccc--eEEEecCCeeccHHHHHHHHHHH
Confidence 222 111 0 01111133556667779999997777777 48999554 3777776555544
No 291
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=98.57 E-value=4.7e-06 Score=73.29 Aligned_cols=113 Identities=13% Similarity=0.073 Sum_probs=70.2
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCC-CCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIV-PGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~-~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|+++|+++|+++|+|++|....+.. ++ .++.+ +++.|++|.+++ .+.+.|+++++++ ++.
T Consensus 158 ~~I~~la~~~gi~vIvDea~~~~~~~~----pl-~~GaD---ivv~S~tK~l~G~~d~~gG~i~~~~~-~~~-------- 220 (388)
T PRK08861 158 AELCQKAKAVGALVAVDNTFLTPVLQK----PL-ELGAD---FVIHSTTKYINGHSDVIGGVLITKTK-EHA-------- 220 (388)
T ss_pred HHHHHHHHHcCCEEEEECCccccccCC----Cc-ccCCC---EEEeecceeccCCCcceeEEEEecHH-HHH--------
Confidence 368999999999999999998644321 22 22332 889999998876 4688999988652 222
Q ss_pred hhhhhHHhhhhhhh-hccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 047983 80 HSISLNMRMDDYLL-LSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPC 140 (233)
Q Consensus 80 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 140 (233)
.+++.... .+...++. .+++-...-+.+.-+.++-.++...+.+.|+..|.
T Consensus 221 ------~~~~~~~~~~G~~~~p~----~a~l~~rgl~Tl~lR~~~~~~~a~~~a~~L~~~p~ 272 (388)
T PRK08861 221 ------EELAWWGNCIGATGTPF----DSYMTLRGIRTLGARMRVHEESAQQILAYLQTQSL 272 (388)
T ss_pred ------HHHHHHHhccCCCCChH----HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 33332222 22222332 11121223345556667778888888888887653
No 292
>PLN02651 cysteine desulfurase
Probab=98.56 E-value=2.3e-06 Score=74.52 Aligned_cols=177 Identities=15% Similarity=0.029 Sum_probs=97.0
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|.++|+++|+++++|.+++. +..+..+..++. -+++.|..|. +.| .-+|++..++ ....++.-.
T Consensus 158 ~~I~~~~~~~g~~~~vD~a~~~----g~~~~~~~~~~~---D~~~~s~hK~-~gp-~G~g~l~v~~--~~~~~l~p~--- 223 (364)
T PLN02651 158 EEIGELCREKKVLFHTDAAQAV----GKIPVDVDDLGV---DLMSISGHKI-YGP-KGVGALYVRR--RPRVRLEPL--- 223 (364)
T ss_pred HHHHHHHHHcCCEEEEEcchhh----CCcccCcccCCC---CEEEechhhh-CCC-CceEEEEEcC--CCCCCCCcc---
Confidence 4789999999999999999985 222223333333 3888899995 433 3489988887 222211100
Q ss_pred hhhhHHhhhhhhhhccCcchH-H-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhc-CCCcccccC--CC---ccEE
Q 047983 81 SISLNMRMDDYLLLSESVYTT-V-GAVPQILEKTEEEFFSKITDILREAADICCDRLKE-IPCITCPKK--PE---GSMF 152 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~--~~---~g~~ 152 (233)
... ... . .....+++.. . .++.+.++-- .+..++.+++.++.++++.+.|++ ++++..+.+ ++ .+..
T Consensus 224 ~~g--~~~-~-~~~~~GT~~~~~~~~l~~al~~~-~~~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~~~~~~~~~~i~ 298 (364)
T PLN02651 224 MSG--GGQ-E-RGRRSGTENTPLVVGLGAACELA-MKEMDYDEKHMKALRERLLNGLRAKLGGVRVNGPRDPEKRYPGTL 298 (364)
T ss_pred ccC--CCc-c-CCccCCCccHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCCCcccCcCCEE
Confidence 000 000 0 0011222222 2 3333333221 223467778888888888888875 566554221 11 1222
Q ss_pred EEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC-------------------CCcEEEEeec--C
Q 047983 153 VMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL-------------------KDWLRITFAV--E 211 (233)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~-------------------~~~~Rl~~~~--~ 211 (233)
. +.++ ++ +.+.+...|.+ |.+..|+.+.. .+.+|+|++. +
T Consensus 299 ~----------~~~~-----~~--~~~~~~~~L~~--i~v~~g~~c~~~~~~~~~~~~~~g~~~~~~~~~vR~S~~~~~t 359 (364)
T PLN02651 299 N----------LSFA-----YV--EGESLLMGLKE--VAVSSGSACTSASLEPSYVLRALGVPEEMAHGSLRLGVGRFTT 359 (364)
T ss_pred E----------EEeC-----CC--CHHHHHHHhCC--EEEEchhhcCCCCCCcCHHHHHcCCChHHhCceEEEEcCCCCC
Confidence 2 2222 22 34455555654 99998875421 2689999996 5
Q ss_pred HHHH
Q 047983 212 PSAF 215 (233)
Q Consensus 212 ~~~l 215 (233)
++++
T Consensus 360 ~~di 363 (364)
T PLN02651 360 EEEV 363 (364)
T ss_pred HHHc
Confidence 6554
No 293
>PRK05939 hypothetical protein; Provisional
Probab=98.56 E-value=3.5e-06 Score=74.30 Aligned_cols=58 Identities=24% Similarity=0.256 Sum_probs=44.4
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecC
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD 66 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~ 66 (233)
++|+++|+++|+++|+|++|.... ...+. .....+++.|+||.++..|.++||+++++
T Consensus 151 ~~I~~la~~~gi~livD~t~a~~~----~~~~~----~~gaDivv~S~sK~~~g~g~~igg~v~~~ 208 (397)
T PRK05939 151 AGIGALCRERGLLYVVDNTMTSPW----LFRPK----DVGASLVINSLSKYIAGHGNALGGAVTDT 208 (397)
T ss_pred HHHHHHHHHcCCEEEEECCccccc----ccCcc----ccCCEEEEecCeecccCCCCeEEEEEecC
Confidence 378999999999999999986421 11111 12345899999999999999999988854
No 294
>PRK08064 cystathionine beta-lyase; Provisional
Probab=98.55 E-value=4.4e-06 Score=73.57 Aligned_cols=113 Identities=13% Similarity=0.055 Sum_probs=69.7
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCC-CCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIV-PGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~-~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|.++|+++|+++|+|++|...... .++ .+ ...+++.|+||.++. +|...|++++.++ ++.
T Consensus 158 ~~I~~la~~~g~~vvvD~a~~~~~~~----~~~-~~---g~Divv~S~tK~~~G~~~~laG~~v~~~~-~~~-------- 220 (390)
T PRK08064 158 RGVVKLAKAIGCLTFVDNTFLTPLLQ----KPL-DL---GADVVLHSATKFLAGHSDVLAGLAVVKDE-ELA-------- 220 (390)
T ss_pred HHHHHHHHHcCCEEEEECCCCccccc----Cch-hh---CCcEEEeecceeccCCccceeEEEEeCCH-HHH--------
Confidence 36899999999999999999864321 122 12 234789999998754 5567788777652 233
Q ss_pred hhhhhHHhhhhhhh-hccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 047983 80 HSISLNMRMDDYLL-LSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPC 140 (233)
Q Consensus 80 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 140 (233)
.+++.... ++...+++...+ . ...-+.+..+.+...+++..+.+.|++.+.
T Consensus 221 ------~~l~~~~~~~g~~~~~~~a~l--~--~~gl~tl~~R~~~~~~~a~~la~~L~~~~~ 272 (390)
T PRK08064 221 ------QKLYFLQNSFGAVLGVQDCWL--V--LRGLKTLHVRLEHSSETANKIALYLQEHPK 272 (390)
T ss_pred ------HHHHHHHHhcCCCCCHHHHHH--H--HcccCcHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 33333222 333333332222 1 123344666777778888888888887653
No 295
>PRK09028 cystathionine beta-lyase; Provisional
Probab=98.55 E-value=5e-06 Score=73.17 Aligned_cols=113 Identities=12% Similarity=0.098 Sum_probs=71.1
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCcccc-CCCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRW-IVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|+++|+++|+++|+|++|.... ...|+ .++. -|++.|.+|.+ |..+...|+++.++ .+.
T Consensus 166 ~~I~~la~~~g~~lvvD~t~a~p~----~~~Pl-~~Ga---Divv~S~tK~l~Gh~d~~~G~~~~~~--~~~-------- 227 (394)
T PRK09028 166 PTLSRIAHEHDIVVMLDNTWASPI----NSRPF-EMGV---DISIQAATKYIVGHSDVMLGTATANE--KHW-------- 227 (394)
T ss_pred HHHHHHHHHcCCEEEEECCccccc----cCCcc-ccCc---eEEEEeCCeEecCCCCEEEEEEECCH--HHH--------
Confidence 378999999999999999998622 11122 2333 39999999988 45577788776544 222
Q ss_pred hhhhhHHhhhhhh-hhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCc
Q 047983 80 HSISLNMRMDDYL-LLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCI 141 (233)
Q Consensus 80 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 141 (233)
.++.... ..+...++. .+++-...-+.+.-+.++-.++...+.+.|++.|.+
T Consensus 228 ------~~l~~~~~~~G~~~~p~----~a~l~~rgl~TL~lR~~~~~~na~~la~~L~~~p~v 280 (394)
T PRK09028 228 ------DQLREHSYLMGQCTSPD----DVYLAMRGLRTLGVRLAQHEKNALKVANWLATRPEV 280 (394)
T ss_pred ------HHHHHHHHhcCCCCCHH----HHHHHHcccCcHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 2232221 222222332 222222334556777788889999999999886543
No 296
>PRK07671 cystathionine beta-lyase; Provisional
Probab=98.54 E-value=7.6e-06 Score=71.73 Aligned_cols=114 Identities=14% Similarity=0.141 Sum_probs=68.1
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCC-ceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|.++|+++|+++|+|++|....+.. ++ ... ..+++.|+||.++.++ .-.|++++.++ .+.
T Consensus 154 ~~I~~la~~~g~~lvvD~a~~~~~~~~----p~-~~g---~Divv~S~sK~l~G~~~~~~G~~v~~~~-~l~-------- 216 (377)
T PRK07671 154 KKISTIAKEKGLLTIVDNTFMTPYWQS----PI-SLG---ADIVLHSATKYLGGHSDVVAGLVVVNSP-ELA-------- 216 (377)
T ss_pred HHHHHHHHHcCCEEEEECCCCccccCC----hh-hhC---CeEEEecCcccccCCccceeEEEEeCcH-HHH--------
Confidence 378999999999999999998633221 22 122 2389999999987654 45577777552 233
Q ss_pred hhhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 047983 80 HSISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPC 140 (233)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 140 (233)
.+++.......+..++.. +.++. ..-+.+..+.+...++...+.+.|++.+.
T Consensus 217 ------~~~~~~~~~~g~~~~~~~--a~l~~-~~l~tl~~R~~~~~~na~~la~~L~~~~~ 268 (377)
T PRK07671 217 ------EDLHFVQNSTGGILGPQD--SWLLL-RGLKTLGIRMEEHETNSRAIAEFLNNHPA 268 (377)
T ss_pred ------HHHHHHHHhhcCCCCHHH--HHHHH-cCcChHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 333322222112222211 11111 12334566777888999999999987654
No 297
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=98.52 E-value=5e-06 Score=72.14 Aligned_cols=190 Identities=15% Similarity=0.051 Sum_probs=112.9
Q ss_pred HHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhhhhhh
Q 047983 5 ETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHSISL 84 (233)
Q Consensus 5 ~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~~~~ 84 (233)
++++.+++.+++|-+-+- +..+..+.. ++ +++.|--|.+|.|| +|.+++++ ..++++.-. ..+.
T Consensus 149 ~l~~~~~~l~iVDavss~----g~~~id~~~---~d--~~~~ssqK~lgP~G--lg~l~~s~--~~~~~~~~~-~~~~-- 212 (349)
T TIGR01364 149 ELPDVKNAPLVADMSSNI----LSRPIDVSK---FG--LIYAGAQKNIGPAG--LTVVIVRK--DLLGRASRI-TPSM-- 212 (349)
T ss_pred eecccCCCeEEEEccccc----cCccCCHHH---cc--EEEEecccccCCCc--eEEEEECH--HHHhhcccC-CCCc--
Confidence 466778999999998876 333333332 33 88999999999888 78888887 344321100 0000
Q ss_pred HHhhhhhh--hhcc-CcchHH-HHHHHHhhhcHHH-HHHHHHHHHHHHHHHHHHHhhcCCCcccccC-C--CccEEEEEe
Q 047983 85 NMRMDDYL--LLSE-SVYTTV-GAVPQILEKTEEE-FFSKITDILREAADICCDRLKEIPCITCPKK-P--EGSMFVMYC 156 (233)
Q Consensus 85 ~~~~~~~~--~~~~-~~~~~~-~~~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~--~~g~~~~~~ 156 (233)
....... .... .++... .++.+.++.-.++ -++++.++.++..+++++.|++++++..+.. | .++....
T Consensus 213 -~~~~~~~~~~~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v~s-- 289 (349)
T TIGR01364 213 -LNYKIHAENDSMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNVV-- 289 (349)
T ss_pred -chHHHHHhcCCCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeEEE--
Confidence 0011001 1111 222322 4554444322233 3788899999999999999999865532211 1 1222222
Q ss_pred cCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec--CHHHHHHHHHHHHHHHHH
Q 047983 157 GSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV--EPSAFEIGLGRMKAFYYR 228 (233)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~--~~~~l~~~~~~l~~~l~~ 228 (233)
+.++ . .. ........+.++|+.+.+|.. ..+.+|+|+.. +.++++..++.|++++++
T Consensus 290 -------f~~~--~---~~-~~~~~~~~~~~~Gi~~~~~~~--~~g~vRvS~~~~nt~edid~l~~al~~~~~~ 348 (349)
T TIGR01364 290 -------FTLG--N---EE-LEKRFLKEAEERGLVSLKGHR--SVGGMRASIYNAMPLEGVQALVDFMKEFQKK 348 (349)
T ss_pred -------EecC--C---hh-HhHHHHHHHHHCCCcccCCcc--ccCeeEEECcCCCCHHHHHHHHHHHHHHHHh
Confidence 2222 1 10 124444567789998877765 23689999986 799999999999887654
No 298
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=98.51 E-value=8.5e-06 Score=71.41 Aligned_cols=112 Identities=13% Similarity=0.141 Sum_probs=68.6
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCC-CCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIV-PGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~-~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|+++|+++|+++|+|++|..-.... ++ .+ .--++++|++|.++. ++...|++++++ +..
T Consensus 155 ~~I~~la~~~g~~livD~t~a~g~~~~----pl-~~---gaDivv~S~tK~l~G~~d~~gG~v~~~~--~~~-------- 216 (377)
T TIGR01324 155 PAIAKAARNPGIVIMIDNTWAAGLLFK----PL-EH---GVDISIQAGTKYLVGHSDIMIGTVVANA--RTW-------- 216 (377)
T ss_pred HHHHHHHHHcCCEEEEECCCccccccC----cc-cc---CceEEEecCceeccCCCCceEEEEEeCH--HHH--------
Confidence 378999999999999999998633211 22 12 233899999999865 457889988876 232
Q ss_pred hhhhhHHhhhhh-hhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 047983 80 HSISLNMRMDDY-LLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPC 140 (233)
Q Consensus 80 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 140 (233)
.++... ...+...++. .+... ...-+.+..+.++..++...+.+.|++.|.
T Consensus 217 ------~~l~~~~~~~G~~l~p~-~a~~~---~rgl~tl~~R~~~~~~~a~~la~~L~~~p~ 268 (377)
T TIGR01324 217 ------DQLREHSYLMGQMVDAD-DAYTT---LRGLRTLGVRLKQHQESSLAIAKWLSEQPE 268 (377)
T ss_pred ------HHHHHHHHHhCCCCCHH-HHHHH---HhhhhhHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 222211 1223222332 21111 123345556677777887788888877543
No 299
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=98.51 E-value=7.3e-06 Score=73.06 Aligned_cols=58 Identities=16% Similarity=0.185 Sum_probs=44.5
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecC
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD 66 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~ 66 (233)
++|+++|+++|+++|+|++|.. +....++ .....+++.|++|.++++|.++|++++..
T Consensus 169 ~~I~~la~~~gi~vIvD~t~a~----~~~~~pl----~~gaDivv~S~tK~lgg~g~~~Gg~v~~~ 226 (431)
T PRK08248 169 EAVAAIAHEHGIPLIVDNTFAS----PYLLRPI----EHGADIVVHSATKFIGGHGTSIGGVIVDS 226 (431)
T ss_pred HHHHHHHHHcCCEEEEeCCCCc----cccCChh----HcCCCEEEEcCccccCCCCCceEEEEEeC
Confidence 3789999999999999999863 1112222 12344889999999999999999988854
No 300
>PRK07050 cystathionine beta-lyase; Provisional
Probab=98.50 E-value=4.3e-06 Score=73.68 Aligned_cols=113 Identities=13% Similarity=0.094 Sum_probs=65.4
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccC-CCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWI-VPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|+++|+++|+++|+|++|....+. .++. . ...+++.|+||.++ ..+.+.|++++.++ ++.
T Consensus 170 ~~I~~ia~~~gi~livD~a~a~~~~~----~~l~-~---GaDi~v~S~tK~~~g~~~~~gG~v~~~~~-~~~-------- 232 (394)
T PRK07050 170 PAITAAARARGVVTAIDNTYSAGLAF----KPFE-H---GVDISVQALTKYQSGGSDVLMGATITADA-ELH-------- 232 (394)
T ss_pred HHHHHHHHHcCCEEEEECCccccccc----CHHH-c---CCeEEEEECCceecCCCCeeEEEEEECCH-HHH--------
Confidence 36899999999999999999863321 1111 1 22488999999875 46678899888663 233
Q ss_pred hhhhhHHhhhhhhh-hccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 047983 80 HSISLNMRMDDYLL-LSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPC 140 (233)
Q Consensus 80 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 140 (233)
.+++.... .+.+.++. .+ .+. ...-+.+..+.++..++...+.+.|++.+.
T Consensus 233 ------~~~~~~~~~~G~~~~~~-~a--~l~-lr~l~tl~~Rl~~~~~~a~~la~~L~~~p~ 284 (394)
T PRK07050 233 ------AKLKLARMRLGIGVSAD-DC--SLV-LRGLPSLQVRLAAHDRSALEVAEWLKARPE 284 (394)
T ss_pred ------HHHHHHHHhcCCCCCHH-HH--HHH-HcCCCcHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 33332222 22222222 11 111 111123344556666666677787776543
No 301
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=98.49 E-value=7e-06 Score=72.04 Aligned_cols=58 Identities=19% Similarity=0.282 Sum_probs=41.7
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCC-ceEEEEEecC
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPG-WRLGWLVTSD 66 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~R~G~~~~~~ 66 (233)
++|+++|+++|+++|+|++|....+.. ++ .+..+ +++.|++|.++.+| .-.|++++.+
T Consensus 154 ~~I~~la~~~gi~vivD~t~a~~~~~~----p~-~~gaD---ivv~S~tK~l~g~~d~~gG~vv~~~ 212 (380)
T PRK06176 154 AQCASVAKDHGLLTIVDNTFATPYYQN----PL-LLGAD---IVVHSGTKYLGGHSDVVAGLVTTNN 212 (380)
T ss_pred HHHHHHHHHcCCEEEEECCccccccCC----cc-ccCCC---EEEecCceeccCCccceeeEEEecH
Confidence 378999999999999999998643321 22 22332 88999999987766 4456666654
No 302
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=98.48 E-value=4.5e-06 Score=73.10 Aligned_cols=178 Identities=20% Similarity=0.207 Sum_probs=105.4
Q ss_pred hHHHHHHHcCcEEEEccccC-ccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCC-------Cccccc
Q 047983 2 CIEETTKKLGIMVIADEVYG-HLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDP-------NGILQD 73 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~-~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~-------~~~~~~ 73 (233)
++.++|++.|.+|+.|-+|. .++-+|..+.|+.. .+ |+.+|..|+| +|-|-|.|.+... ....++
T Consensus 188 ~~reIad~vga~l~~D~sH~~GLIa~g~~~~P~~~--AD---vvt~sThKtl--~GPrggiI~~~~~~~~~~~~~~~~~~ 260 (399)
T PF00464_consen 188 RFREIADEVGAYLMADISHIAGLIAGGLFPNPFPY--AD---VVTGSTHKTL--RGPRGGIILTNKGSKNVDKKGKEIDE 260 (399)
T ss_dssp HHHHHHHHTT-EEEEE-TTTHHHHHTTSS--GCCT--SS---EEEEESSGGG---SSS-EEEEES-SEEEE-TTS-EEEH
T ss_pred HHHHHHHhcCcEEEecccccccceehheecCcccc--ce---EEEeeccccc--cccCceEEEEcCCccccCCcccccHH
Confidence 68899999999999999998 66667766666643 22 8899999975 5667788888711 000011
Q ss_pred cchhhhhhhhhHHhhhhhhhhcc--CcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCcc
Q 047983 74 LGVAFFHSISLNMRMDDYLLLSE--SVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGS 150 (233)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g 150 (233)
++. .++......+. ++.... ++++..+........++..+.+-+|.+.|.+.|.+. ++.........
T Consensus 261 -~l~--------~~I~~avfP~~qg~~h~~~iaalAval~ea~~~~fk~Ya~qVv~NAk~La~~L~~~-G~~v~~ggTd~ 330 (399)
T PF00464_consen 261 -ELA--------EKIDSAVFPGLQGGPHMHRIAALAVALKEALSPEFKEYAKQVVKNAKALAEALQER-GFKVVTGGTDN 330 (399)
T ss_dssp -HHH--------HHHHHHHTTTT-SS--HHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT-T-EEGGGS-SS
T ss_pred -HHH--------HHhccccCCCcccCcchhHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHhhC-CcEEEECCCCC
Confidence 233 55555433221 122211 555554443334456888899999999999999886 44433333445
Q ss_pred EEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEE----CCcccC-CCCcEEEEeec
Q 047983 151 MFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVL----PGITVG-LKDWLRITFAV 210 (233)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~----pg~~f~-~~~~~Rl~~~~ 210 (233)
-.+| +++... ++ +...+.+.|++.||.+. |+..-. ..+.+||....
T Consensus 331 H~vl-----------vd~~~~-~~--~g~~a~~~Le~~gI~vnkn~iP~d~~~~~~sGlRlGT~~ 381 (399)
T PF00464_consen 331 HQVL-----------VDLRSF-GI--DGKEAEKALEEAGIIVNKNTIPGDRSPFVPSGLRLGTPA 381 (399)
T ss_dssp SEEE-----------EEGGGG-TS---HHHHHHHHHHTTEE-EEE--TTTSTTTT-SEEEEESHH
T ss_pred CeEE-----------EEeccc-cc--chHHHHHHHHhcCeeecccccCCCCCCCCCCEEEECCHH
Confidence 6666 454331 22 56778889999999985 333101 14679998763
No 303
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.48 E-value=3.5e-06 Score=72.51 Aligned_cols=193 Identities=14% Similarity=0.086 Sum_probs=110.1
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCc-cccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTH-FVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~-~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
.|..+|+++++++|.||+...|...+.. ...+..+.++ |.++.|. ...|+++|...+.+ .+.+.+.
T Consensus 231 ~L~k~C~~~~vl~I~DEV~tG~gR~g~~~a~e~~~~~PD-----I~t~aK~-L~gGlPigA~~v~~--kV~~~i~----- 297 (433)
T KOG1401|consen 231 GLRKECDDNGVLLIFDEVQTGLGRLGYGWAQEYFGVTPD-----ITTVAKP-LGGGLPIGATGVRD--KVAEMIS----- 297 (433)
T ss_pred HHHHHHhhcCceEEeehhhhCccccchHHHHHHhCcCCc-----ceeehhh-ccCCceeEEEeehH--HHHhhcC-----
Confidence 4789999999999999999998776642 2333334443 7799998 55689999999988 3432110
Q ss_pred hhhhHHhhhhhhhhccCcchHH--HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecC
Q 047983 81 SISLNMRMDDYLLLSESVYTTV--GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGS 158 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~ 158 (233)
+.+.+.+ ..+.+.++.+ ++...+-.-...++.++..+.-+.-++.+.+.+.+-+.... ..-..++++-
T Consensus 298 ---~~~~l~h--g~Tf~gnpLacsa~~~~l~~l~~~e~~k~vs~~~k~L~~~l~e~~~~~~~~i~-g~~grgl~ig---- 367 (433)
T KOG1401|consen 298 ---PGDHLYH--GGTFSGNPLACSAGIKVLDELKDPETLKNVSKIGKELRKLLDEYLKKTPNSIC-GGVGRGLVIG---- 367 (433)
T ss_pred ---CCCcccc--CcccCCChhhhhHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccCCCcee-eeeeeEEEEE----
Confidence 0011111 2233445554 33333311124567777777777778888888877433221 1122234443
Q ss_pred CCccccc--ccccccCCC-CChHHHH---HHHHhccCEEEECCcccCCCCcEEEEeecCHHHHHHHHHHHHHHHHHHh
Q 047983 159 EDKCLLK--LNYSLLEGI-NSDTEFA---LKLAKEESIIVLPGITVGLKDWLRITFAVEPSAFEIGLGRMKAFYYRHA 230 (233)
Q Consensus 159 ~~~~~~~--~~~~~~~~~-~~~~~~~---~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~~~~~l~~~~~~l~~~l~~~~ 230 (233)
+. .+....-.. -....+. .+.+.+.|+.++| -|+ +++..++|.++.+++.+.+++.+..
T Consensus 368 -----~~~~~p~~~~~d~~~~~~ll~~~~~~~~~~~gv~i~P-------~~~-l~~~~~~E~i~~~l~i~~~~l~~~~ 432 (433)
T KOG1401|consen 368 -----FEFEGPVYKFADAAREQGLLILTLGKGLLEEGVRIAP-------IYL-LTVEHTPEVIQRLLTILEKVLSALN 432 (433)
T ss_pred -----EEEeechhhhhhhhhhhhHHHHHHhcccccceEEEec-------ccc-ccccCcHHHHHHHHHHHHHHHHHhc
Confidence 21 222211000 0011222 2223345778777 222 5555578899999999999988754
No 304
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=98.46 E-value=1.2e-05 Score=70.50 Aligned_cols=63 Identities=21% Similarity=0.199 Sum_probs=42.0
Q ss_pred ChHHHHHHHcCcEEEEccccCc-cccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCcccc
Q 047983 1 FCIEETTKKLGIMVIADEVYGH-LVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQ 72 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~-~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~ 72 (233)
++|.++|++||++||+|++|+. ..+.+.. + +.... .+.||++...+++.+.|+++++++ ++.+
T Consensus 138 ~~i~~~a~~~gi~vi~D~a~a~g~~~~~~~---~---g~~g~--~~~Sf~~~K~l~~g~GG~v~~~~~-~~~~ 201 (379)
T PRK11658 138 DAIRAIGERYGIPVIEDAAHAVGTYYKGRH---I---GARGT--AIFSFHAIKNITCAEGGLVVTDDD-ELAD 201 (379)
T ss_pred HHHHHHHHHcCCeEEEECCCccCCeECCee---c---CCCCC--EEEeCCCCCcCcccCceEEEECCH-HHHH
Confidence 3689999999999999999984 3333321 1 22121 356666655667778899888753 4443
No 305
>PLN02590 probable tyrosine decarboxylase
Probab=98.46 E-value=1.1e-05 Score=73.54 Aligned_cols=218 Identities=11% Similarity=0.040 Sum_probs=120.6
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCcccc-ccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVP-MGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~-~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|.++|++||+|+-+|-+|+.+..-.++... +..+..-+ =+..+..|. +....-+|.+..++...+.+.+..
T Consensus 307 ~~Ia~i~~~~g~WlHVDaA~GG~al~~~~~r~~~~Gie~AD--Sit~D~HK~-l~~p~~cg~llvr~~~~l~~a~~~--- 380 (539)
T PLN02590 307 VPLGNIAKKYGIWLHVDAAYAGNACICPEYRKFIDGIENAD--SFNMNAHKW-LFANQTCSPLWVKDRYSLIDALKT--- 380 (539)
T ss_pred HHHHHHHHHhCCeEEEecchhhhhhcChhhHHHhcCCccCC--EEEECchhh-cCcCcCEEEEEecCHHHHHHHhhc---
Confidence 47999999999999999999987643322211 22222111 234578997 778889999998875323211000
Q ss_pred hhhhhHH------hhhhhhhhccCcchHHHHHH--HHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccE
Q 047983 80 HSISLNM------RMDDYLLLSESVYTTVGAVP--QILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSM 151 (233)
Q Consensus 80 ~~~~~~~------~~~~~~~~~~~~~~~~~~~~--~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~ 151 (233)
+..-+.. ....+..++...+....++. ..+...+.+-++++.+..-+..+++.+.|++.+++....+|+-+.
T Consensus 381 ~~~YL~~~~~~~~~~~d~~d~~i~lsRr~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~~~~l~i 460 (539)
T PLN02590 381 NPEYLEFKVSKKDTVVNYKDWQISLSRRFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTRYFSL 460 (539)
T ss_pred CHHHhCCcccccccCCCccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceEE
Confidence 0000000 00001111111111112222 223333556677788888888999999998887777655555444
Q ss_pred EEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec---CHHHHHHHHHHHHHHHHH
Q 047983 152 FVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV---EPSAFEIGLGRMKAFYYR 228 (233)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~---~~~~l~~~~~~l~~~l~~ 228 (233)
.+| +-.+.. .+...... -..+...++. +.|...+......+..++|+|+.. ++++++.+++.|.+...+
T Consensus 461 VcF---r~~~~~--~~~~~~~~--ln~~l~~~l~-~~G~~~vs~t~~~g~~~lR~~i~n~~T~~~dv~~~~~~i~~~a~~ 532 (539)
T PLN02590 461 VCF---RLAPVD--GDEDQCNE--RNRELLAAVN-STGKIFISHTALSGKFVLRFAVGAPLTEEKHVTEAWQIIQKHASK 532 (539)
T ss_pred EEE---EecCCC--CCHHHHHH--HHHHHHHHHH-hCCCEEEEeeEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Confidence 443 211100 00000000 0223344444 455555554555556789999985 699999999999988777
Q ss_pred Hhhc
Q 047983 229 HAKK 232 (233)
Q Consensus 229 ~~~~ 232 (233)
+.++
T Consensus 533 ~~~~ 536 (539)
T PLN02590 533 FTRN 536 (539)
T ss_pred hccc
Confidence 6543
No 306
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=98.44 E-value=1.3e-05 Score=69.92 Aligned_cols=198 Identities=13% Similarity=0.062 Sum_probs=109.2
Q ss_pred HHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh-h-
Q 047983 4 EETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH-S- 81 (233)
Q Consensus 4 ~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~-~- 81 (233)
.++++++|+++|+|-+-+- +..+..+.. --+++.|--|.++.+|- ++.++.++ ..++++.-.... .
T Consensus 148 ~~I~~~~g~~~iVDavqs~----g~~~idv~~-----~D~~~~s~~K~lg~~~G-l~~~~~s~--~~~~~~~~~~~~~~~ 215 (361)
T TIGR01366 148 RRPEGSDDALVVIDATSGA----GGLPVDIAE-----TDVYYFAPQKNFASDGG-LWLAIMSP--AALERIEAIAASGRW 215 (361)
T ss_pred ccccccCCCeEEEEcCccc----cCCCCCHHH-----CCEEEEEchhhcCCCCc-eEEEEECH--HHHhhhhcccCCCCC
Confidence 3457889999999999886 333333332 12688999999998853 55555565 343321100000 0
Q ss_pred ----hhhHHhhhhhh-hhccCcchHH--HHHHHHhhhcHHH-HHHHHHHHHHHHHHHHHHHhhcCCCcccccCCC---cc
Q 047983 82 ----ISLNMRMDDYL-LLSESVYTTV--GAVPQILEKTEEE-FFSKITDILREAADICCDRLKEIPCITCPKKPE---GS 150 (233)
Q Consensus 82 ----~~~~~~~~~~~-~~~~~~~~~~--~~~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~---~g 150 (233)
.++-....... ..+.++++.. .++.+.++.-.+. -++...++.++..+++++.+++++.+..+.... ..
T Consensus 216 ~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~ 295 (361)
T TIGR01366 216 VPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKRSQ 295 (361)
T ss_pred CchhhhHHHHHhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhccc
Confidence 00000000000 0112222222 3444433221122 156667888899999999998876543322211 11
Q ss_pred EEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec--CHHHHHHHHHHHHHHHHH
Q 047983 151 MFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV--EPSAFEIGLGRMKAFYYR 228 (233)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~--~~~~l~~~~~~l~~~l~~ 228 (233)
.... +.++ . +. +.+.+...|+++||.+.++..--....+|+++.. +.++++.+++.|.+++++
T Consensus 296 ~v~~---------v~~~-~---g~--~~~~v~~~L~~~gI~i~~~~~~l~~~~vRis~~~~~t~~di~~l~~al~~~~~~ 360 (361)
T TIGR01366 296 VVGT---------IDFV-D---DI--DAATVAKILRANGIVDTEPYRKLGRNQLRVAMFPAIDPDDVEALTECVDWVVER 360 (361)
T ss_pred ceEE---------EECC-C---cc--CHHHHHHHHHHCCCeeccCccccCCCcEEEEcCCCCCHHHHHHHHHHHHHHHhh
Confidence 1122 2232 1 22 4455555567789999876422225689999996 899999999999987765
No 307
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=98.43 E-value=6.9e-06 Score=73.06 Aligned_cols=58 Identities=16% Similarity=0.167 Sum_probs=41.2
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCcc-----ccCCCCceE-----EEEEecC
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISK-----RWIVPGWRL-----GWLVTSD 66 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK-----~~~~~G~R~-----G~~~~~~ 66 (233)
++|+++|+++|+++|+|++|.. + -.......+.+ |++.|+|| ...++|.++ +|..+++
T Consensus 167 ~~I~~iA~~~gi~livD~T~~t----P-~~~~pl~~GAD---Ivv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~ 234 (432)
T PRK06702 167 KEFSDAAKELEVPFIVDNTLAT----P-YLCQAFEHGAN---IIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKY 234 (432)
T ss_pred HHHHHHHHHcCCEEEEECCCCc----h-hhCChhhcCCC---EEEEccccccCCCcceeceEEEeCCCcccccccc
Confidence 4789999999999999999852 1 11111222332 99999999 777788887 6776544
No 308
>PRK05967 cystathionine beta-lyase; Provisional
Probab=98.41 E-value=2.1e-05 Score=69.29 Aligned_cols=113 Identities=14% Similarity=0.111 Sum_probs=69.7
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccC-CCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWI-VPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|+++|+++|+++|+|++|....+- .|+. ++.+ |++.|.+|..+ ..+...|+++.++ ...
T Consensus 169 ~~I~~la~~~g~~vvVD~t~a~p~~~----~pl~-~GaD---ivv~S~tKy~~Gh~d~~~G~v~~~~--~~~-------- 230 (395)
T PRK05967 169 PAIAEAAHRHGAIVMMDNTWATPLYF----RPLD-FGVD---ISIHAATKYPSGHSDILLGTVSANE--KCW-------- 230 (395)
T ss_pred HHHHHHHHHhCCEEEEECCccCceec----ChhH-cCCC---EEEEecccccCCCCCeeEEEEEcCH--HHH--------
Confidence 47899999999999999999863322 1222 3333 99999999864 4778889777654 222
Q ss_pred hhhhhHHhhhhhh-hhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCc
Q 047983 80 HSISLNMRMDDYL-LLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCI 141 (233)
Q Consensus 80 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 141 (233)
.++.... ..+...++. .+++-..+-+.+.-+.++..++...+.+.|++.|.+
T Consensus 231 ------~~l~~~~~~~G~~~~p~----da~l~~rgl~Tl~lR~~~~~~na~~lA~~L~~hp~v 283 (395)
T PRK05967 231 ------PQLLEAHGTLGLCAGPD----DTYQILRGLRTMGIRLEHHRKSALEIARWLEGRPDV 283 (395)
T ss_pred ------HHHHHHHHHcCCCCCHH----HHHHHHcCcccHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 2222211 222222222 222222344556666677788888888888876543
No 309
>PLN02509 cystathionine beta-lyase
Probab=98.41 E-value=3.5e-05 Score=69.25 Aligned_cols=115 Identities=15% Similarity=0.057 Sum_probs=67.9
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCC-ceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|+++|++||+++|+|++|....... ++ .... -+++.|++|.++.+| .=.|.+++.++ .+.
T Consensus 237 ~~I~~lAk~~g~~lIVD~A~a~~~~~~----pl-~~ga---Divv~S~tK~l~G~gdv~gG~v~~~~~-~l~-------- 299 (464)
T PLN02509 237 RKIAEMAHAQGALVLVDNSIMSPVLSR----PL-ELGA---DIVMHSATKFIAGHSDVMAGVLAVKGE-KLA-------- 299 (464)
T ss_pred HHHHHHHHHcCCEEEEECCccccccCC----hh-hcCC---cEEEecCcccccCCCccceeEEEeccH-HHH--------
Confidence 378999999999999999987543221 12 1222 388999999877643 34577776552 222
Q ss_pred hhhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCc
Q 047983 80 HSISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCI 141 (233)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 141 (233)
.++...........++.. +.++ ...-+.+..+.++..++++.+.+.|++.|.+
T Consensus 300 ------~~~~~~~~~~g~~l~p~~--A~l~-lr~L~tL~~R~~r~~~nA~~la~~L~~~p~V 352 (464)
T PLN02509 300 ------KEVYFLQNSEGSGLAPFD--CWLC-LRGIKTMALRIEKQQENARKIAMYLSSHPRV 352 (464)
T ss_pred ------HHHHHHHHhcCCCcCHHH--HHHH-HhhhhhHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 222211111111122211 1121 1233566777888889999999999876543
No 310
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=98.40 E-value=2.2e-05 Score=68.77 Aligned_cols=203 Identities=14% Similarity=-0.003 Sum_probs=109.3
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCC-CCceEEEEEecCCCccccccchhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIV-PGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~-~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
+|++ +++|+++|+|-+.+- |..+..+..+ -+++.|.-|.++. +| +|++..++ +.++++.-....
T Consensus 157 ~I~~--~~~g~~~vVDa~qs~----G~~pidv~~i-----D~~~~s~~K~l~~P~G--~g~l~v~~--~~~~~~~p~~~~ 221 (378)
T PRK03080 157 RWIG--ADREGLTICDATSAA----FALPLDWSKL-----DVYTFSWQKVLGGEGG--HGMAILSP--RAVERLESYTPA 221 (378)
T ss_pred hhcc--ccCCCeEEEeccccc----ccCCCCHHHC-----cEEEEehhhhCCCCCc--eEEEEECH--HHHHhhhcccCC
Confidence 3444 567999999988776 2333333321 2889999998754 67 78888887 344321110000
Q ss_pred hh-----hhHH---hhhh-hhhhccCcchHH--HHHHHHhhhcHHH-HHHHHHHHHHHHHHHHHHHhhcCCCcccccC-C
Q 047983 81 SI-----SLNM---RMDD-YLLLSESVYTTV--GAVPQILEKTEEE-FFSKITDILREAADICCDRLKEIPCITCPKK-P 147 (233)
Q Consensus 81 ~~-----~~~~---~~~~-~~~~~~~~~~~~--~~~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~ 147 (233)
.. ++.. .... +...+.++++.. .++.+.++.-.+. -++++.++.++..+++++.|++++++..+.. +
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~ 301 (378)
T PRK03080 222 RPIPKFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTAANASVLYDWAEKTPWATPLVADP 301 (378)
T ss_pred CCCchhheeccchHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCcccccCCc
Confidence 00 0000 0010 001111222221 2222222211122 2567778888888999999988765433211 1
Q ss_pred --CccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec--CHHHHHHHHHHHH
Q 047983 148 --EGSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV--EPSAFEIGLGRMK 223 (233)
Q Consensus 148 --~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~--~~~~l~~~~~~l~ 223 (233)
.++..+. +.++... ++ .+.+.+.+++ ++|+.+..|..-...+.+|+|+.. +.++++.+++.|+
T Consensus 302 ~~~s~~i~~---------~~~~~~~-~~--~~~~~~~~l~-~~~i~v~~g~~~~~~~~vRis~~~~~t~~di~~l~~al~ 368 (378)
T PRK03080 302 ATRSNTSVT---------LDFVDAQ-AA--VDAAAVAKLL-RENGAVDIEPYRDAPNGLRIWCGPTVEPADVEALTPWLD 368 (378)
T ss_pred cccCccEEE---------EEcCCch-HH--HHHHHHHHHH-HcCCeeccccccCCCCcEEEecCCCCCHHHHHHHHHHHH
Confidence 1222222 2232100 00 1344555555 458888775422125789999885 8999999999999
Q ss_pred HHHHHHhhc
Q 047983 224 AFYYRHAKK 232 (233)
Q Consensus 224 ~~l~~~~~~ 232 (233)
+++++.+..
T Consensus 369 ~~~~~~~~~ 377 (378)
T PRK03080 369 WAFERLKAA 377 (378)
T ss_pred HHHHHHhhc
Confidence 998877653
No 311
>PLN02271 serine hydroxymethyltransferase
Probab=98.39 E-value=3.2e-05 Score=70.12 Aligned_cols=202 Identities=12% Similarity=0.075 Sum_probs=118.1
Q ss_pred hHHHHHHHcCcEEEEccccCccccC-CCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCcccccc-chhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFG-NTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDL-GVAFF 79 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~-~~~~~ 79 (233)
+|.++|+++|+++++|-++..-... +..+.|+.. . -|+.+|..|++ .|-|-|.+...+. +.... ...-.
T Consensus 317 ~i~eIAdevGA~LmvD~AH~aGLIa~g~~~sP~~~--a---Dvvt~TTHKtL--rGPrGG~I~~r~~--~~~~~~g~~gs 387 (586)
T PLN02271 317 RFRQIADKCGAVLMCDMAHISGLVAAKECVNPFDY--C---DIVTSTTHKSL--RGPRGGIIFYRKG--PKLRKQGMLLS 387 (586)
T ss_pred HHHHHHHHcCCEEEEECcccccccccCcCCCCCcC--C---cEEEeCCcccC--CCCCceEEEeccc--ccccccCCccc
Confidence 6889999999999999999953333 323333431 2 28899999976 3444488887652 11000 00000
Q ss_pred hhh-----hhHHhhhhhhh--hccCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccE
Q 047983 80 HSI-----SLNMRMDDYLL--LSESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSM 151 (233)
Q Consensus 80 ~~~-----~~~~~~~~~~~--~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~ 151 (233)
++. ....++..... +-.++.... ++++..++.-....+++..+.+.+|.+.|.+.|.+. ++.........-
T Consensus 388 ~s~~~~~~d~~~kI~~aVfPglqgGphn~~IAalAvalkea~~~efk~Ya~QVv~NAkaLA~~L~~~-G~~vv~ggTdnH 466 (586)
T PLN02271 388 HGDDNSHYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQVATPEYKAYMQQVKKNAQALASALLRR-KCRLVTGGTDNH 466 (586)
T ss_pred cccccccHHHHHHhhcccCCccccChhHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHC-CCeEeeCCCCcc
Confidence 000 00023322211 112222222 555555543333344788899999999999999775 443323333455
Q ss_pred EEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC-----CCcEEEEee------cCHHHHHHHHH
Q 047983 152 FVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL-----KDWLRITFA------VEPSAFEIGLG 220 (233)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~-----~~~~Rl~~~------~~~~~l~~~~~ 220 (233)
.++ +++... ++ +...+.+.|++.||.+..-...+. .+.+||... ..++++++..+
T Consensus 467 lvL-----------vDl~~~-g~--~G~~ae~~Le~~~I~~Nkn~iP~d~~~~~psGiRiGT~alT~rG~~e~d~~~iA~ 532 (586)
T PLN02271 467 LLL-----------WDLTTL-GL--TGKNYEKVCEMCHITLNKTAIFGDNGTISPGGVRIGTPAMTSRGCLESDFETIAD 532 (586)
T ss_pred eee-----------ecCccc-CC--CHHHHHHHHHHcCeEeccccCCCCCCCCCCCcccccCHHHHhcCCCcHHHHHHHH
Confidence 566 555432 33 668888999999999854222221 577999654 25678888877
Q ss_pred HHHHHHH
Q 047983 221 RMKAFYY 227 (233)
Q Consensus 221 ~l~~~l~ 227 (233)
.|.++++
T Consensus 533 ~i~~~~~ 539 (586)
T PLN02271 533 FLLRAAQ 539 (586)
T ss_pred HHHHHHh
Confidence 7777765
No 312
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=98.38 E-value=4.6e-06 Score=73.37 Aligned_cols=65 Identities=22% Similarity=0.176 Sum_probs=42.9
Q ss_pred ChHHHHHHHcCcEEEEccccC-ccccCCCccccccccCC----ccCEEEEccCccccCCCCceEEEEEecCC
Q 047983 1 FCIEETTKKLGIMVIADEVYG-HLVFGNTHFVPMGVFGS----IVPVLTLGSISKRWIVPGWRLGWLVTSDP 67 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~-~~~~~~~~~~~~~~~~~----~~~~i~~~s~sK~~~~~G~R~G~~~~~~~ 67 (233)
++|+++|.++++.|++||+|+ ++.|. +-+.+...++. +..++++.|..|+ ..+=...+++...+.
T Consensus 187 ~~I~~~~h~~~~~llvDEAhGah~~F~-~lp~~a~~~gad~~~~~~~~vvqS~HKt-L~altQts~lh~~~~ 256 (417)
T PF01276_consen 187 KEIAEICHKHGIPLLVDEAHGAHFGFH-PLPRSALALGADRPNDPGIIVVQSTHKT-LPALTQTSMLHVKGD 256 (417)
T ss_dssp HHHHHHHCCTECEEEEE-TT-TTGGCS-GGGTTCSSTTSS-CTSBEEEEEEEHHHH-SSS-TT-EEEEEETC
T ss_pred HHHHHHhcccCCEEEEEccccccccCC-CCccchhhccCccccccceeeeechhhc-ccccccceEEEecCC
Confidence 368999999999999999999 44444 22223333322 2458999999998 555556678888773
No 313
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=98.38 E-value=3.2e-05 Score=66.54 Aligned_cols=190 Identities=16% Similarity=0.140 Sum_probs=123.9
Q ss_pred hHHHHHHHcCcEEEEccccC-ccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYG-HLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~-~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++.++|.+.|.+|++|-+|- .++-+|..+.|+.. .+ |+.+|..|++ +|-|-|.|.+.++ ++.
T Consensus 185 ~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~~~--Ad---vVTtTTHKTl--rGPrGG~Il~~~e-------el~--- 247 (413)
T COG0112 185 RFREIADEVGAYLMVDMAHVAGLIAGGVHPNPLPH--AD---VVTTTTHKTL--RGPRGGIILTNDE-------ELA--- 247 (413)
T ss_pred HHHHHHHHhCceEEehHHHHHHHHhcccCCCCCCc--cc---eEeCCcccCC--CCCCceEEEeccH-------HHH---
Confidence 67899999999999999998 66666666666643 22 8899999976 4556677777652 334
Q ss_pred hhhhHHhhhhhhhhccCcchHH---HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEec
Q 047983 81 SISLNMRMDDYLLLSESVYTTV---GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCG 157 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~ 157 (233)
.++......+.-..+.. ++.+-.++...+..+++..+.+.+|.+.|.+.|.+. ++.........-.+.
T Consensus 248 -----kkin~aVFPg~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~-G~~vvsGgTdnHl~l--- 318 (413)
T COG0112 248 -----KKINSAVFPGLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKER-GFKVVSGGTDNHLVL--- 318 (413)
T ss_pred -----HHhhhhcCCccCCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHc-CCeEecCCccceEEE---
Confidence 55555444322222222 444444444444566788888999999999999885 443322222233333
Q ss_pred CCCcccccccccccCCCCChHHHHHHHHhccCEEEEC-CcccC---C--CCcEEEEee------cCHHHHHHHHHHHHHH
Q 047983 158 SEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLP-GITVG---L--KDWLRITFA------VEPSAFEIGLGRMKAF 225 (233)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~p-g~~f~---~--~~~~Rl~~~------~~~~~l~~~~~~l~~~ 225 (233)
+++... ++ +-+.+...|.+.||.+.- +-.|. + ++.+||... ..++++++..+.|.++
T Consensus 319 --------VDl~~~-~~--~Gk~ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~v 387 (413)
T COG0112 319 --------VDLRSK-GL--TGKKAEAALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEMEEIADLIADV 387 (413)
T ss_pred --------EEcccC-CC--CHHHHHHHHHHcCEeeccCCCCCCCCCCCCCccceeccHHHhhcCCCHHHHHHHHHHHHHH
Confidence 455421 33 678888999999999954 22332 2 578999554 2577888888888887
Q ss_pred HHH
Q 047983 226 YYR 228 (233)
Q Consensus 226 l~~ 228 (233)
+..
T Consensus 388 l~~ 390 (413)
T COG0112 388 LDG 390 (413)
T ss_pred Hhc
Confidence 765
No 314
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=98.35 E-value=9.1e-07 Score=74.51 Aligned_cols=186 Identities=19% Similarity=0.144 Sum_probs=122.5
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCC--cccccccc-CCccCEEEEccCccccCCCCceEEE--EEecCCCccccccc
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNT--HFVPMGVF-GSIVPVLTLGSISKRWIVPGWRLGW--LVTSDPNGILQDLG 75 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~--~~~~~~~~-~~~~~~i~~~s~sK~~~~~G~R~G~--~~~~~~~~~~~~~~ 75 (233)
++|.++.++.+...+.|-+|..|.-++. ....+..+ ....+++.+-|++|..|+.|-|+|. +++.+. +.-. .
T Consensus 221 ~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g~~~~laQSyAKNMGLYgERvGa~svvc~~a-d~A~--r 297 (427)
T KOG1411|consen 221 EKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVEDGHEILLAQSYAKNMGLYGERVGALSVVCKDA-DEAK--R 297 (427)
T ss_pred HHHHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHHcCCceEeehhhhhhcchhhhccceeEEEecCH-HHHH--H
Confidence 4688899999999999999999987652 22222222 3446799999999999999999999 466553 1111 1
Q ss_pred hhhhhhhhhHHhhhhhhh-h-ccCcchHHHHHHHHhhhc-----HHHHHHHHHHHHHHHHHHHHHHhhcC--C-Cccccc
Q 047983 76 VAFFHSISLNMRMDDYLL-L-SESVYTTVGAVPQILEKT-----EEEFFSKITDILREAADICCDRLKEI--P-CITCPK 145 (233)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~~~~~~l~~~L~~~--~-~~~~~~ 145 (233)
+- .+++.... + +.+|...+..++.++++. +-..++.+.+++...|+.|.+.|+.- + .|. +.
T Consensus 298 V~--------SQlk~liRpmYSnPP~hGArIv~~Il~d~~l~~~W~~evk~MadRi~~mR~~L~d~L~~~gs~~~W~-hI 368 (427)
T KOG1411|consen 298 VE--------SQLKILIRPMYSNPPLHGARIVATILSDPDLKNQWLGEVKGMADRIISMRQQLFDALEKEGSPGNWS-HI 368 (427)
T ss_pred HH--------HHHHHHhcccccCCCccchhhhhhccCChHHHHHHHHHHHHHHHhhhhhHHHHhHHhhcCCCCccHH-HH
Confidence 11 22222222 1 323333336666666554 23456667888999999999999773 2 333 24
Q ss_pred CCCccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec-CHHHHHHHHHHHHH
Q 047983 146 KPEGSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV-EPSAFEIGLGRMKA 224 (233)
Q Consensus 146 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~-~~~~l~~~~~~l~~ 224 (233)
.-+-|+|++ ..+ ..+.+..+.+++.|.++.-. |||++. +..++....+.|.+
T Consensus 369 ~~QIGMF~f-----------Tgl--------~peQv~~l~ke~~iYmT~dG--------RiS~aG~ss~nV~yLa~aih~ 421 (427)
T KOG1411|consen 369 TKQIGMFCF-----------TGL--------NPEQVDWLTKEYHIYLTKDG--------RISMAGLSSSNVPYLADAIHA 421 (427)
T ss_pred HHhhheeee-----------cCC--------CHHHHHHHHhhheeeeccCc--------eEeeccccccCCcccchhhHh
Confidence 456799998 654 67888999999999998422 888885 55555555555544
Q ss_pred H
Q 047983 225 F 225 (233)
Q Consensus 225 ~ 225 (233)
+
T Consensus 422 v 422 (427)
T KOG1411|consen 422 V 422 (427)
T ss_pred H
Confidence 3
No 315
>PLN02880 tyrosine decarboxylase
Probab=98.33 E-value=1.3e-05 Score=72.52 Aligned_cols=213 Identities=10% Similarity=0.005 Sum_probs=116.0
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCcc-ccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHF-VPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|.++|++||+|+.+|-+|+.+....+.. ..+..+..-| -+..++.|. +....-+|.+..++...+.+. +. .
T Consensus 259 ~eI~~i~~~~~iwlHVDaA~gg~~~~~~~~~~~l~gie~aD--Sit~d~HKw-l~~P~~~g~llvr~~~~l~~~--~~-~ 332 (490)
T PLN02880 259 LELGKIAKSNGMWFHVDAAYAGSACICPEYRHYIDGVEEAD--SFNMNAHKW-FLTNFDCSLLWVKDRNALIQS--LS-T 332 (490)
T ss_pred HHHHHHHHHcCCEEEEehhhHHHHHhCHHHHHHhcCchhcC--EEEECchhh-cCCCccEEEEEEeCHHHHHHH--Hc-c
Confidence 479999999999999999999875432221 1222222111 456789997 778889999998864222211 00 0
Q ss_pred hhhhhHHhh------hhhhhhccCcchHHHHHHHH--hhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccE
Q 047983 80 HSISLNMRM------DDYLLLSESVYTTVGAVPQI--LEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSM 151 (233)
Q Consensus 80 ~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~--l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~ 151 (233)
+..-+.... ..+..++........++.-+ +...+.+-+.+..+..-+.++++.+.|++.+++....+|+.++
T Consensus 333 ~~~Yl~~~~~~~~~~~~~~~~~i~~~rr~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~~~~~i 412 (490)
T PLN02880 333 NPEFLKNKASQANSVVDYKDWQIPLGRRFRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTPRIFSL 412 (490)
T ss_pred CHHHhcCccccccCCCChhccCcCCCCcccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCceEE
Confidence 000000000 00000110000011233322 2223444555555555588888888888877777656666555
Q ss_pred EEEEecCCCcccccccccccCCCC--C--hHHHHHHHHhccCEEEECCcccCCCCcEEEEeec---CHHHHHHHHHHHHH
Q 047983 152 FVMYCGSEDKCLLKLNYSLLEGIN--S--DTEFALKLAKEESIIVLPGITVGLKDWLRITFAV---EPSAFEIGLGRMKA 224 (233)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~---~~~~l~~~~~~l~~ 224 (233)
.++ +++.... ... + ......++.++..+.+. ...+.+..++|+|+.. ++++++.+++.|.+
T Consensus 413 v~F----------r~~~~~~-~~~~~~~~n~~l~~~l~~~g~~~v~-~t~~~g~~~lR~~~~n~~tt~~di~~~~~~i~~ 480 (490)
T PLN02880 413 VCF----------RLVPPKN-NEDNGNKLNHDLLDAVNSSGKIFIS-HTVLSGKYVLRFAVGAPLTEERHVTAAWKVLQD 480 (490)
T ss_pred EEE----------EEeCCCC-ChhhHHHHHHHHHHHHHhCCCEEEE-EEEECCEEEEEEEecCCCCCHHHHHHHHHHHHH
Confidence 443 2221100 000 0 12334444444444444 4555667899999985 57999999999988
Q ss_pred HHHHHhh
Q 047983 225 FYYRHAK 231 (233)
Q Consensus 225 ~l~~~~~ 231 (233)
..+++..
T Consensus 481 ~~~~~~~ 487 (490)
T PLN02880 481 EASKLLG 487 (490)
T ss_pred HHHHHHH
Confidence 8777643
No 316
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=98.31 E-value=5.9e-05 Score=68.27 Aligned_cols=205 Identities=16% Similarity=0.051 Sum_probs=109.9
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCC----CceEEEEEecCCCccccccch
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVP----GWRLGWLVTSDPNGILQDLGV 76 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~----G~R~G~~~~~~~~~~~~~~~~ 76 (233)
++|+++|+++|+++++|.++..-..+ . .+...++. -++++|..|.++.| |--+|++.+++ .+.+.|.-
T Consensus 228 ~eI~~~a~~~gal~iVD~a~~~~~~g-~--~~~~~~Ga---D~~~~~~hK~l~~P~g~Ggp~~G~l~~~~--~~~~~lp~ 299 (481)
T PRK04366 228 LEIAEIVHEAGGLLYYDGANLNAILG-K--ARPGDMGF---DVVHLNLHKTFSTPHGGGGPGSGPVGVKE--ELAPFLPV 299 (481)
T ss_pred HHHHHHHHHcCCEEEEEecChhhhcc-c--CCccccCC---CEEEEechhhcCCCCCCCCCCeeeeeehh--hhHhhCCC
Confidence 36889999999999999998532111 1 11222233 37888999987644 45578888876 34432210
Q ss_pred hhhhhhhhH-----H-hhhhhhhhccCcchHH--HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCC
Q 047983 77 AFFHSISLN-----M-RMDDYLLLSESVYTTV--GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPE 148 (233)
Q Consensus 77 ~~~~~~~~~-----~-~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~ 148 (233)
. ....+.. . +-.+........++.. .+...++...+.+=+++..++..++.+++.+.|+++..+. +..|.
T Consensus 300 ~-~v~~~g~~~~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~~~~~~-~~~~~ 377 (481)
T PRK04366 300 P-VVEKDGDRYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLKARLKDIYDLP-YDRPC 377 (481)
T ss_pred C-eeeccCCceeecccccccCCCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhCccc-CCCCe
Confidence 0 0000000 0 0000000111111111 2222223233445566777777888899999998752322 11111
Q ss_pred ccEEEEEecCCCccccccccc--ccCCCCChHHHHHHHHhccCEEEECCcccC--CCCcEEEEeec--CHHHHHHHHHHH
Q 047983 149 GSMFVMYCGSEDKCLLKLNYS--LLEGINSDTEFALKLAKEESIIVLPGITVG--LKDWLRITFAV--EPSAFEIGLGRM 222 (233)
Q Consensus 149 ~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~--~~~~~Rl~~~~--~~~~l~~~~~~l 222 (233)
-.-++ ++.+ ...++ +...+.+.|.++||.+. +..+. ..+.+|+|+.. +.++++..++.|
T Consensus 378 ~~~~~------------~~~~~~~~~g~--~~~~v~~~L~~~Gi~~~-~~~~p~~~~~~l~is~~e~~t~edid~l~~~l 442 (481)
T PRK04366 378 MHEFV------------LSGKKLKETGV--RTLDIAKRLLDYGFHPP-TIYFPLIVPEALMIEPTETESKETLDAFIAAM 442 (481)
T ss_pred eEEEE------------EECccccccCC--CHHHHHHHHHHCCccCC-ccccccccCCeEEEcccCCCCHHHHHHHHHHH
Confidence 11121 1211 11122 44556666678899865 22332 25689999874 789999999999
Q ss_pred HHHHHHHh
Q 047983 223 KAFYYRHA 230 (233)
Q Consensus 223 ~~~l~~~~ 230 (233)
.++.++..
T Consensus 443 ~~i~~~~~ 450 (481)
T PRK04366 443 KQIAEEAK 450 (481)
T ss_pred HHHHHHHH
Confidence 98887664
No 317
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=98.29 E-value=4.3e-05 Score=66.58 Aligned_cols=186 Identities=16% Similarity=0.064 Sum_probs=108.8
Q ss_pred cCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhhhhhhHHhhh
Q 047983 10 LGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHSISLNMRMD 89 (233)
Q Consensus 10 ~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (233)
+|+++|+|-+-+- +..+..+.. ++ +++.|--|.+|.|| +|.+++++ ..++++.-. ......+.
T Consensus 165 ~g~l~vVDavss~----g~~~idv~~---~d--~~~~ssqK~lgP~G--lg~l~~s~--~~l~~~~~~----~~~~~~~~ 227 (360)
T PRK05355 165 GDVPLVADMSSDI----LSRPIDVSK---FG--LIYAGAQKNIGPAG--LTIVIVRE--DLLGRALPS----IPSMLDYK 227 (360)
T ss_pred CCCcEEEEcCccc----cCccCCHHH---cc--EEEEeccccccCCc--eEEEEECH--HHHhhcccC----CChHHHHH
Confidence 7899999988876 233333332 23 88899999998777 78888887 444321110 00000111
Q ss_pred hhhh--hccC-cchHH-HHHHHHhhhcHHH-HHHHHHHHHHHHHHHHHHHhhcCCCcccccCC--CccEEEEEecCCCcc
Q 047983 90 DYLL--LSES-VYTTV-GAVPQILEKTEEE-FFSKITDILREAADICCDRLKEIPCITCPKKP--EGSMFVMYCGSEDKC 162 (233)
Q Consensus 90 ~~~~--~~~~-~~~~~-~~~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~--~~g~~~~~~~~~~~~ 162 (233)
.... ...+ ++... .++.+.++.-.+. -++.+.++.++..+++++.|++++....+..+ .++.-..
T Consensus 228 ~~~~~~~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~v~s-------- 299 (360)
T PRK05355 228 THADNDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAIDSSDFYRNPVAPEDRSRMNVP-------- 299 (360)
T ss_pred HHHhcCCccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCChhhcCCcEEE--------
Confidence 0001 1112 22222 5555444322223 37888899999999999999998632211111 1222222
Q ss_pred cccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec--CHHHHHHHHHHHHHHHHHH
Q 047983 163 LLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV--EPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~--~~~~l~~~~~~l~~~l~~~ 229 (233)
+.++.. . ........+.++|+...+|.. ..+.+|+|+.. +.++++..++.|+++++..
T Consensus 300 -f~~~~~----~--~~~~~~~~~~~~Gi~~~~~~~--~~g~vRiS~~~~nt~eei~~l~~~l~~~~~~~ 359 (360)
T PRK05355 300 -FTLADE----E--LDKKFLAEAKAAGLVGLKGHR--SVGGMRASIYNAMPLEGVQALVDFMKEFERRH 359 (360)
T ss_pred -EEcCCh----H--HHHHHHHHHHHCCCcccCCCC--ccCcEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 223211 1 224444566678999866653 34789999986 7999999999999887653
No 318
>PRK15029 arginine decarboxylase; Provisional
Probab=98.26 E-value=5.5e-05 Score=71.37 Aligned_cols=64 Identities=11% Similarity=0.003 Sum_probs=41.5
Q ss_pred ChHHHHHHHcCcEEEEccccC-ccccCCCcccccccc-----C-CccCEEEEccCccccCCCCceEEEEEecC
Q 047983 1 FCIEETTKKLGIMVIADEVYG-HLVFGNTHFVPMGVF-----G-SIVPVLTLGSISKRWIVPGWRLGWLVTSD 66 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~-~~~~~~~~~~~~~~~-----~-~~~~~i~~~s~sK~~~~~G~R~G~~~~~~ 66 (233)
++|+++|++++++|++||+|+ +|.|.+ ......++ . ....++++.|..|+ ..+=...+|+...+
T Consensus 331 ~~I~~~~h~~~~~llvDEAhGah~~F~~-~~p~~sa~~~~~~~~~Gad~~vvqStHKt-L~alTQaS~LHv~~ 401 (755)
T PRK15029 331 KEAQDLLEKTSDRLHFDEAWYGYARFNP-IYADHYAMRGEPGDHNGPTVFATHSTHKL-LNALSQASYIHVRE 401 (755)
T ss_pred HHHHHHHHhcCCeEEEECccccccccCc-cccccccccccccccCCCceEEEEchhhc-ccchhhhhhheeCC
Confidence 368999999999999999998 455543 22112333 1 11235999999997 33333445666654
No 319
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=98.25 E-value=7.6e-05 Score=65.37 Aligned_cols=205 Identities=15% Similarity=0.079 Sum_probs=99.8
Q ss_pred ChHHHHHHHcCcEEEEccccCccc-cCCCccccccccCCccCEEEEccC--ccccCCCCceEEEEEecCCCccccccchh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLV-FGNTHFVPMGVFGSIVPVLTLGSI--SKRWIVPGWRLGWLVTSDPNGILQDLGVA 77 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~-~~~~~~~~~~~~~~~~~~i~~~s~--sK~~~~~G~R~G~~~~~~~~~~~~~~~~~ 77 (233)
++|.++|++||++||+|++++... +.+.. +......+ +.+.|+ +|.++.+ .-|++++.++ .+.+++...
T Consensus 138 ~~i~~l~~~~~~~lI~D~a~a~g~~~~~~~---~g~~~~~d--~~~~S~~~~K~~~~~--~GG~v~~~~~-~~~~~~~~~ 209 (380)
T TIGR03588 138 QAIAALAKKHGLKIIEDASHALGAEYGGKP---VGNCRYAD--ATVFSFHPVKIITTA--EGGAVTTNDE-ELAERMRLL 209 (380)
T ss_pred HHHHHHHHHcCCEEEEECCCcccCccCCEe---CCCccccc--eEEEecCCCCccccc--CceEEEECCH-HHHHHHHHH
Confidence 378999999999999999998642 33322 11111113 455555 4876542 3577777663 333221111
Q ss_pred hhhhhhhHHhh--------hhhhhhccCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCC
Q 047983 78 FFHSISLNMRM--------DDYLLLSESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPE 148 (233)
Q Consensus 78 ~~~~~~~~~~~--------~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~ 148 (233)
+.+........ ..+.....+.+... ...+++...+. +.+++..+.-+++.+++.+.|.+++.+..+..+.
T Consensus 210 ~~~g~~~~~~~~~~~~~~~~~~~~~~~g~n~~m~~l~aa~g~~qL-~~l~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~ 288 (380)
T TIGR03588 210 RSHGITKDPLLFEKQDEGPWYYEQQELGFNYRMTDIQAALGLSQL-KKLDRFVAKRREIAARYDRLLKDLPYFTPLTIPL 288 (380)
T ss_pred HHCCCCCCcccccccccCcceeeeeccccccCccHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCCCccCCCCCC
Confidence 00000000000 00000000001111 11122210111 2346666777777888888888876554322222
Q ss_pred c---cEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcc----------------cCC-----CCcE
Q 047983 149 G---SMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGIT----------------VGL-----KDWL 204 (233)
Q Consensus 149 ~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~----------------f~~-----~~~~ 204 (233)
+ .++.. + +.++.. .+. +.+.+.+.|+++||.+.+... +.. ...+
T Consensus 289 ~~~~~~~~~-~-------i~~~~~--~~~--~r~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l 356 (380)
T TIGR03588 289 GSKSAWHLY-P-------ILLDQE--FGC--TRKEVFEALRAAGIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEI 356 (380)
T ss_pred CCEeEEEEE-E-------EEECCc--CCC--CHHHHHHHHHHCCCCcccCCcccccChhhhccCCcCCCcHHHHHHhceE
Confidence 1 22222 0 223211 012 556667777888998864220 000 2457
Q ss_pred EEEeec--CHHHHHHHHHHHHHHH
Q 047983 205 RITFAV--EPSAFEIGLGRMKAFY 226 (233)
Q Consensus 205 Rl~~~~--~~~~l~~~~~~l~~~l 226 (233)
++.+.. ++++++..++.|++++
T Consensus 357 ~lP~~~~l~~~dv~~i~~~l~~~~ 380 (380)
T TIGR03588 357 SLPLHPALTLEQQQRVVETLRKVL 380 (380)
T ss_pred EcCCCCCCCHHHHHHHHHHHHHhC
Confidence 776665 7888888888877653
No 320
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=98.23 E-value=1.4e-06 Score=73.63 Aligned_cols=60 Identities=20% Similarity=0.198 Sum_probs=41.8
Q ss_pred ChHHHHHHHcCcEEEEccccCc-cccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEec
Q 047983 1 FCIEETTKKLGIMVIADEVYGH-LVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTS 65 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~-~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~ 65 (233)
++|+++|+++|+++|+||+|+. +.+.+..+ .. ....+..+++.|++|. ++|+|.|+++..
T Consensus 173 ~~I~~~~~~~g~~livDeA~~~~~~~~~~~~--~~-~~~~~~div~~S~hK~--l~g~~~~~~l~~ 233 (294)
T cd00615 173 RKIVEEAHHRGLPVLVDEAHGAHFRFHPILP--SS-AAMAGADIVVQSTHKT--LPALTQGSMIHV 233 (294)
T ss_pred HHHHHHHHhcCCeEEEECcchhhhccCcccC--cc-hhhcCCcEEEEchhcc--cchHhHHHHHHh
Confidence 4799999999999999999984 44443221 11 1223566999999997 477777665433
No 321
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=98.22 E-value=6.8e-05 Score=65.87 Aligned_cols=114 Identities=18% Similarity=0.204 Sum_probs=66.1
Q ss_pred hHHHHHHHcC-cEEEEccccCccccCCCccccccccCCccCEEEEccCccccCC-CCceEEEEEecCCCccccccchhhh
Q 047983 2 CIEETTKKLG-IMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIV-PGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 2 ~i~~l~~~~~-~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~-~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
+|+++|+++| +++|+|..+.....- .|+. ++.+ |++.|.||.+++ ...=.|.+++++...+.
T Consensus 161 ~i~~~a~~~g~~~~vVDnT~atp~~~----~pL~-~GaD---ivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~-------- 224 (386)
T PF01053_consen 161 AIAKLAKEHGDILVVVDNTFATPYNQ----NPLE-LGAD---IVVHSATKYLSGHSDVMGGAVVVNGSSELY-------- 224 (386)
T ss_dssp HHHHHHHHTTT-EEEEECTTTHTTTC-----GGG-GT-S---EEEEETTTTTTTSSSE-EEEEEESSHHHHH--------
T ss_pred HHHHHHHHhCCceEEeeccccceeee----ccCc-CCce---EEEeeccccccCCcceeeEEEEECchhhhh--------
Confidence 6899999998 999999999863211 1222 3333 889999998754 44445667765522232
Q ss_pred hhhhhHHhhhhhhh-hccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCc
Q 047983 80 HSISLNMRMDDYLL-LSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCI 141 (233)
Q Consensus 80 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 141 (233)
.+++.... ++....+. .+++-...-+.+.-+.++..++...+.+.|++.|.+
T Consensus 225 ------~~l~~~~~~~G~~~~p~----da~ll~rgl~Tl~~R~~~~~~nA~~lA~~L~~hp~V 277 (386)
T PF01053_consen 225 ------DRLREFRRLLGATLSPF----DAWLLLRGLRTLPLRMERQNENAEALAEFLEEHPKV 277 (386)
T ss_dssp ------HHHHHHHHHHT-B--HH----HHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTSTTE
T ss_pred ------hhhcchhhhcCccchHH----HHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 33332222 22222222 112112334556677788888999999999886644
No 322
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=98.19 E-value=0.00013 Score=65.05 Aligned_cols=57 Identities=19% Similarity=0.281 Sum_probs=42.6
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEec
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTS 65 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~ 65 (233)
++|+++|+++|+++|+|++|..-. ...++ .++.+ +++.|++|.++.+|-.+|.+++.
T Consensus 168 ~~I~~la~~~gi~livD~a~a~~~----~~~pl-~~gaD---ivv~S~tK~lgg~~~~~gG~v~~ 224 (427)
T PRK05994 168 AAIAEVAHRAGLPLIVDNTLASPY----LIRPI-EHGAD---IVVHSLTKFLGGHGNSMGGIIVD 224 (427)
T ss_pred HHHHHHHHHcCCEEEEECCccccc----cCCcc-ccCCc---EEEEcCccccCCCCCcEEEEEEe
Confidence 378999999999999999997421 11122 22332 88999999999888888887764
No 323
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=98.17 E-value=0.0001 Score=65.78 Aligned_cols=58 Identities=16% Similarity=0.184 Sum_probs=42.5
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecC
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD 66 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~ 66 (233)
++|.++|+++|+++|+|+++..-. ...++ ..+.+ +++.|++|.++..|--+|++++..
T Consensus 175 ~~I~~la~~~gi~liVD~t~a~~~----~~~pl-~~GaD---ivv~S~tK~lgg~G~~i~G~vv~~ 232 (436)
T PRK07812 175 PGVAEVAHEAGVPLIVDNTIATPY----LIRPL-EHGAD---IVVHSATKYLGGHGTAIAGVIVDG 232 (436)
T ss_pred HHHHHHHHHcCCEEEEECCCcccc----cCCch-hcCCC---EEEEecccccCCCCCeEEEEEEcC
Confidence 478999999999999999886421 11122 12222 677999999998888888877753
No 324
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=98.13 E-value=0.00012 Score=63.72 Aligned_cols=187 Identities=15% Similarity=0.074 Sum_probs=105.0
Q ss_pred HHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhhhhhh
Q 047983 5 ETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHSISL 84 (233)
Q Consensus 5 ~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~~~~ 84 (233)
++++.||+.+++|-+-+- |..+..+..+ + +.+.|--|.+|.+| +|.+++++ .+++++.-. ..+.
T Consensus 157 ~i~~~~g~~~~VDa~qs~----g~~~idv~~~---~--~~~ss~~K~lGP~G--~g~l~~~~--~~~~~~~~~-~~~~-- 220 (355)
T cd00611 157 EVPDTGGVPLVADMSSNI----LSRPIDVSKF---G--VIYAGAQKNLGPAG--VTVVIVRK--DLLGKARKI-TPSM-- 220 (355)
T ss_pred eecccCCCeEEEEccccc----cCCCCCHHHh---C--EEEeecccccCCCc--eEEEEECH--HHHhhcccC-CCCc--
Confidence 466779999999998886 3333333322 2 45566799988887 78888877 344321110 0000
Q ss_pred HHhhhhh-hh-hccCcchH-H-HHHHHHhhhcHHH-HHHHHHHHHHHHHHHHHHHhhcCCCcc-cccCC--CccEEEEEe
Q 047983 85 NMRMDDY-LL-LSESVYTT-V-GAVPQILEKTEEE-FFSKITDILREAADICCDRLKEIPCIT-CPKKP--EGSMFVMYC 156 (233)
Q Consensus 85 ~~~~~~~-~~-~~~~~~~~-~-~~~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~--~~g~~~~~~ 156 (233)
...... .. ...++++. . .++.+.++--.+. -++.+.++.++..+++++.|++++++. ....+ .++..+.
T Consensus 221 -~~~~~~~~~~~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~vvs-- 297 (355)
T cd00611 221 -LNYKTHADNNSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGFYRGPVDKRARSRMNVP-- 297 (355)
T ss_pred -ccHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCccccccCCCHHHcCceEEE--
Confidence 000100 00 01222222 2 4444443222222 267888999999999999999986642 11111 1222233
Q ss_pred cCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec--CHHHHHHHHHHHHHH
Q 047983 157 GSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV--EPSAFEIGLGRMKAF 225 (233)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~--~~~~l~~~~~~l~~~ 225 (233)
+..+. .. ........+.+.|+.+.+|.. ..+.+|+|+.. +.++++.+++.|+++
T Consensus 298 ---------f~~~~---~~-l~~~~~~~~~r~G~~~~~~~~--~~g~vR~S~~~~nt~edi~~l~~al~~~ 353 (355)
T cd00611 298 ---------FRLGK---EE-LEKEFLKEAEAAGMIGLKGHR--SVGGIRASIYNALSLEGVQALADFMKEF 353 (355)
T ss_pred ---------EEcCC---hh-hhHHHHHHHHHCCCcccCCCc--ccCeEEEEccCCCCHHHHHHHHHHHHHH
Confidence 22211 10 123333466678998666654 23689999997 899999988888764
No 325
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.12 E-value=4.8e-05 Score=65.31 Aligned_cols=196 Identities=17% Similarity=0.137 Sum_probs=116.4
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCC--CccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGN--THFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAF 78 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~--~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~ 78 (233)
++|+++..+|...||.||.|+.-..+. .....-..++..+--++++|++-+....| |+++++. ++- .
T Consensus 253 ~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~alas~G---gFc~G~~---~i~---~-- 321 (467)
T KOG1358|consen 253 PEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETALASGG---GFCAGKS---FIA---D-- 321 (467)
T ss_pred HHHHHHHhhheEEEEEecccccccccccCccccccCCCCccceeeeeecccccccccC---ceeecce---eeE---e--
Confidence 378999999999999999999766543 33333333444455588999999888788 9999854 321 1
Q ss_pred hhhhhhHHhhhhhhh-hccCcchHH--HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEE
Q 047983 79 FHSISLNMRMDDYLL-LSESVYTTV--GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMY 155 (233)
Q Consensus 79 ~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~ 155 (233)
| +++.+... ++++.++.. ++..++ .-.++-.++.+.+++....+...|....++.....|++.+...
T Consensus 322 -h-----QrLSg~~Y~fSAslPp~la~aa~~ai---~i~~~~p~~~~~L~~k~~~~H~~l~~~s~~~v~~~~~SPi~hl- 391 (467)
T KOG1358|consen 322 -H-----QRLSGSGYCFSASLPPYLAGAAIKAI---LIEEWNPEIVQPLRAKVAKFHAALSSNSGFIVSGSPESPIIHL- 391 (467)
T ss_pred -e-----eeccccceeeeccCchhhhhhHHHHH---HHHhhCcchhhhhhccccccchhhhcCCceEEecCcCCceeee-
Confidence 1 44444333 344434332 333332 1222333355666666677777776654444334455544433
Q ss_pred ecCCCcccccccccccCCCCCh----HHHHHHHHhccCEEEECCcccCC------CCcEEEEeec--CHHHHHHHHHHHH
Q 047983 156 CGSEDKCLLKLNYSLLEGINSD----TEFALKLAKEESIIVLPGITVGL------KDWLRITFAV--EPSAFEIGLGRMK 223 (233)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ll~~~gi~v~pg~~f~~------~~~~Rl~~~~--~~~~l~~~~~~l~ 223 (233)
++.-+.. .-+++ .+.+.+++.+ |+.++-....-. ..-+|+|+.. ++++++++...|+
T Consensus 392 ---------~l~~~~~-s~e~e~~lL~eivd~~i~~-~~ll~~a~~~~~~e~~~~~pSiri~~~a~~seeel~ra~~~ik 460 (467)
T KOG1358|consen 392 ---------QLERSYG-SREKEEKLLEEIVDKCIAE-GVLLTRAKYLEKLERCPIPPSIRICVSAGMSEEELERAAELIK 460 (467)
T ss_pred ---------eeccccc-chHHHHHHHHHHHHHHHhh-cceehhhhhhhhcccCCCCCcEEEEEeCCCCHHHHHHHHHHHH
Confidence 1211110 00112 2456666666 888876544421 4579999986 8999999999888
Q ss_pred HHHHH
Q 047983 224 AFYYR 228 (233)
Q Consensus 224 ~~l~~ 228 (233)
+....
T Consensus 461 ~~~~~ 465 (467)
T KOG1358|consen 461 EVASA 465 (467)
T ss_pred HHHHh
Confidence 76543
No 326
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=98.00 E-value=2.5e-05 Score=67.55 Aligned_cols=60 Identities=22% Similarity=0.245 Sum_probs=42.9
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecC
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD 66 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~ 66 (233)
+|.++|++||+++|.||+.+.+..+|.-. .....+-.+.+ -+++|.++. |+.+|.+++++
T Consensus 202 ~l~~lc~~~gillI~DEV~tG~gRtG~~~-a~~~~gv~PDi---v~~gK~l~g-G~p~sav~~~~ 261 (339)
T PF00202_consen 202 ELRELCREHGILLIADEVQTGFGRTGKFF-ASEHYGVDPDI---VTFGKGLGG-GLPISAVLGSE 261 (339)
T ss_dssp HHHHHHHHTT-EEEEEETTTTTTTTSSSS-GHHHHTSSSSE---EEEEGGGGT-TSSEEEEEEEH
T ss_pred ehcccccccccceecccccccccccCCcc-ceecccccCcc---cccccchhh-hhhcccccccc
Confidence 68999999999999999999997776422 22222222233 356799554 69999999988
No 327
>PRK08114 cystathionine beta-lyase; Provisional
Probab=97.99 E-value=0.00035 Score=61.58 Aligned_cols=112 Identities=13% Similarity=0.086 Sum_probs=68.6
Q ss_pred ChHHHHHHHc--CcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCC-CceEEEEEecCCCccccccchh
Q 047983 1 FCIEETTKKL--GIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVP-GWRLGWLVTSDPNGILQDLGVA 77 (233)
Q Consensus 1 ~~i~~l~~~~--~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~-G~R~G~~~~~~~~~~~~~~~~~ 77 (233)
++|+++|+++ |+++|+|.++.--. . .....++.+ +++.|.+|.++++ ..-.|.++.++ ...
T Consensus 167 ~~Ia~ia~~~g~g~~lvVDnT~a~p~----~-~~pl~~GaD---ivv~S~tKyl~Ghsdv~~G~v~~~~--~~~------ 230 (395)
T PRK08114 167 PAIVAAVRSVNPDAVIMIDNTWAAGV----L-FKALDFGID---ISIQAGTKYLVGHSDAMIGTAVANA--RCW------ 230 (395)
T ss_pred HHHHHHHHHhCCCCEEEEECCCcccc----c-cCHHHcCCc---EEEEcCcccccCCCcceeEEEEcCH--HHH------
Confidence 3689999998 49999999998622 1 222233443 9999999976554 47778666554 222
Q ss_pred hhhhhhhHHhhhhhh-hhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 047983 78 FFHSISLNMRMDDYL-LLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPC 140 (233)
Q Consensus 78 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 140 (233)
..++... ..+...++ ..+++-..+-+.+.-+.++..++...+.+.|++.|.
T Consensus 231 --------~~l~~~~~~~G~~~~p----~~a~l~~rgl~TL~lR~~~~~~na~~va~~L~~hp~ 282 (395)
T PRK08114 231 --------EQLRENSYLMGQMVDA----DTAYMTSRGLRTLGVRLRQHEESSLKVAEWLAEHPE 282 (395)
T ss_pred --------HHHHHHHHhccCCCCH----HHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 2222221 22222222 222322233455667778888899999999987654
No 328
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=97.97 E-value=0.00039 Score=59.24 Aligned_cols=185 Identities=12% Similarity=0.089 Sum_probs=99.6
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCc-cccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTH-FVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~-~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
.|.++|++|++..|+||+.....-+|.- ...-..++.... +-+|||-|- +| ||..... ++
T Consensus 296 kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~PpD---~vTFSKK~q-~g---Gffh~~~---------fr--- 356 (484)
T KOG1405|consen 296 KLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDSPPD---VVTFSKKFQ-TG---GFFHDEE---------FR--- 356 (484)
T ss_pred HHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCCCcc---ceehhhhhh-cC---ccccCcc---------cC---
Confidence 5789999999999999999885544421 011122233223 448999854 45 5655432 11
Q ss_pred hhhhHHhhhhhhhhccCcchHHHHHHHHhhh-cHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCC
Q 047983 81 SISLNMRMDDYLLLSESVYTTVGAVPQILEK-TEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSE 159 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~ 159 (233)
++..++.++++..-+.-. ..+..+++. ..+..+.+....=..-...|.+.-++.|+........|.|..|
T Consensus 357 ---pn~pYrifNTWmGdP~k~-lll~~vv~~I~~~~Ll~n~~~vG~~l~~gL~~Lq~~~p~~~~~~RGrGTF~a~----- 427 (484)
T KOG1405|consen 357 ---PNEPYRIFNTWMGDPSKN-LLLEEVVQEIKREDLLNNVAHVGKALLKGLLELQAKYPGKINNLRGRGTFIAW----- 427 (484)
T ss_pred ---CCchHHHhhhhcCChHHH-HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhcccccceEEEE-----
Confidence 014566666654322222 222222222 2222333333322222233322223356554334555555555
Q ss_pred CcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC-CCcEEEEeecCHHHHHHHHHHHHHHHHH
Q 047983 160 DKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL-KDWLRITFAVEPSAFEIGLGRMKAFYYR 228 (233)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~-~~~~Rl~~~~~~~~l~~~~~~l~~~l~~ 228 (233)
+++.. .-.+.....++-+||.+- ++|. .-.+|-++...+.-.+..++++.+.+..
T Consensus 428 -------d~ps~----~~Rdk~i~~~~~nGv~~G---GCg~~siRfRPsLvf~~~Ha~i~l~~~~k~l~~ 483 (484)
T KOG1405|consen 428 -------DCPSG----SIRDKLILIARLNGVNLG---GCGDKSIRFRPSLVFRKHHADIFLDIFDKILAG 483 (484)
T ss_pred -------eCCCh----HHHHHHHHHHHHcCceec---ccccceeeeccceeehhhhHHHHHHHHHHHhcc
Confidence 66531 245666777888898873 2332 2345557777777788888888887753
No 329
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=97.97 E-value=0.00052 Score=61.33 Aligned_cols=57 Identities=16% Similarity=0.222 Sum_probs=43.3
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEec
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTS 65 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~ 65 (233)
++|.++|+++|+++|+|.++..-.. ..++ .++.+ +++.|.+|.++.+|-.+|.+++.
T Consensus 169 ~~I~~la~~~gi~livD~t~a~~~~----~~pl-~~GaD---~vv~S~tK~l~g~g~~~gG~v~~ 225 (433)
T PRK08134 169 PTVAAIAHEAGVPLLVDSTFTTPYL----LRPF-EHGAD---LVYHSATKFLGGHGTAIGGVLVD 225 (433)
T ss_pred HHHHHHHHHcCCEEEEECCCccccc----CCch-hcCCC---EEEeccccccCCCCCceEEEEEe
Confidence 4789999999999999999875221 1222 23333 88999999999899889888764
No 330
>PLN02452 phosphoserine transaminase
Probab=97.91 E-value=0.00052 Score=59.91 Aligned_cols=162 Identities=14% Similarity=0.076 Sum_probs=91.6
Q ss_pred EEccCccccCCCCceEEEEEecCCCccccccchhhhhhhhhHHhh-hhhhhhccCcchHH-HHHHHHhhhcHHH-HHHHH
Q 047983 44 TLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHSISLNMRM-DDYLLLSESVYTTV-GAVPQILEKTEEE-FFSKI 120 (233)
Q Consensus 44 ~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~l~~~~~~-~~~~~ 120 (233)
.+.|--|.+|.|| +|.+++++ ++++++.-. ....+..+. .........++... .++...++.-.++ =++.+
T Consensus 194 ~~~saqK~lGP~G--l~~v~vr~--~~l~~~~~~--~~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~ 267 (365)
T PLN02452 194 IYAGAQKNVGPSG--VTIVIIRK--DLIGNARPI--TPGMLDYKIHAENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAM 267 (365)
T ss_pred EEEecccccCCCC--eEEEEEcH--HHHhhcccC--CCchhhHHHHHhcCCccCChhHHHHHHHHHHHHHHHHccCHHHH
Confidence 3469999999999 68888887 444321100 000000000 00001111222222 4444443222222 37888
Q ss_pred HHHHHHHHHHHHHHhhcCCCcc-cccCC--CccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcc
Q 047983 121 TDILREAADICCDRLKEIPCIT-CPKKP--EGSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGIT 197 (233)
Q Consensus 121 ~~~~~~~~~~l~~~L~~~~~~~-~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~ 197 (233)
.++.+++.+++++.|++.+++. ....+ .+.+-+. +.++ . . +..+...+.++++|+...+|..
T Consensus 268 ~~r~~~~a~~l~~~l~~~~G~y~~~~~~~~rs~~~vs---------F~~~--~---~-~~~~~f~~~~~~~g~~~~~G~r 332 (365)
T PLN02452 268 EKRNIRKADLLYDAIDESNGFYVCPVEKSVRSLMNVP---------FTLG--G---S-ELEAEFVKEAAKAGMVQLKGHR 332 (365)
T ss_pred HHHHHHHHHHHHHHHHhCCCcccCCCChHHhCCeEEE---------EEcC--C---c-hhHHHHHHHHHHCCCcccCCcc
Confidence 9999999999999998865541 11111 2333444 2232 1 1 2566677778899999999886
Q ss_pred cCCCCcEEEEeec--CHHHHHHHHHHHHHHHHH
Q 047983 198 VGLKDWLRITFAV--EPSAFEIGLGRMKAFYYR 228 (233)
Q Consensus 198 f~~~~~~Rl~~~~--~~~~l~~~~~~l~~~l~~ 228 (233)
-- +.+|+++-. +.++++.+++-++++-++
T Consensus 333 ~~--gg~R~s~yna~~~~~v~~L~~~m~~f~~~ 363 (365)
T PLN02452 333 SV--GGMRASIYNAMPLAGVEKLVAFMKDFQAK 363 (365)
T ss_pred cc--CceEEECcCCCCHHHHHHHHHHHHHHHHh
Confidence 53 239998875 777777777776666544
No 331
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=97.90 E-value=1.9e-05 Score=60.15 Aligned_cols=58 Identities=14% Similarity=-0.004 Sum_probs=43.9
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEec
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTS 65 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~ 65 (233)
+|+++|+++|+++|+|++|..+...... ......+..+++.|++|.++. .++||++++
T Consensus 113 ~l~~~~~~~~~~li~D~a~~~~~~~~~~----~~~~~~~~d~~~~s~~K~~~~--~~~G~l~~~ 170 (170)
T cd01494 113 EIRKIAKEYGILLLVDAASAGGASPAPG----VLIPEGGADVVTFSLHKNLGG--EGGGVVIVK 170 (170)
T ss_pred HHHHHHHHcCCEEEEecccccccccccc----cccccccCCEEEEEcccccCC--CceEEEEeC
Confidence 7899999999999999999987765422 111222345888999998766 789999863
No 332
>PRK13578 ornithine decarboxylase; Provisional
Probab=97.88 E-value=0.00026 Score=66.44 Aligned_cols=205 Identities=14% Similarity=0.133 Sum_probs=101.5
Q ss_pred hHHHH-HHHcCcEEEEccccCc-cccCCC--ccccc-cccCCc-cCEEEEccCccccCCCCceEEEEEecCCCccccc-c
Q 047983 2 CIEET-TKKLGIMVIADEVYGH-LVFGNT--HFVPM-GVFGSI-VPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQD-L 74 (233)
Q Consensus 2 ~i~~l-~~~~~~~lI~De~y~~-~~~~~~--~~~~~-~~~~~~-~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~-~ 74 (233)
+|+++ |+.++ +|++||+|+. +.|.+. ..++. ...+.+ .-++++.|..|. ..+=...+|+...+ ..++. =
T Consensus 302 ~I~~~~~h~~~-~llvDEAhgah~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKt-L~alTQaS~LHvk~--~~i~g~~ 377 (720)
T PRK13578 302 QVVDKIGHLCD-YILFDSAWVGYEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQ-QAGFSQTSQIHKKD--NHIKGQA 377 (720)
T ss_pred HHHHHhhccCC-cEEEeCcchhhhccCcccccCChhhhhcCCCCCCeEEEEChhhc-chhhhhHhhhhcCC--ccccccc
Confidence 57787 67778 9999999994 444431 11111 223333 457999999997 33333445666654 12210 0
Q ss_pred chhhhhhhhhHHhhhhhhhh--ccCcchHH-HH---HHHHhhh-cHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccC-
Q 047983 75 GVAFFHSISLNMRMDDYLLL--SESVYTTV-GA---VPQILEK-TEEEFFSKITDILREAADICCDRLKEIPCITCPKK- 146 (233)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~---~~~~l~~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~- 146 (233)
..+. -.+++....+ +++|+.+. +. .++++.. .+.+.+++..+...+-|+.+.+.++. +..+.+
T Consensus 378 ~~v~------~~r~~~al~m~qSTSPsY~LmASLDva~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~---~~~~~p~ 448 (720)
T PRK13578 378 RYCP------HKRLNNAFMLHASTSPFYPLFAALDVNAKMHEGESGRRLWMECVKLGIEARKLILARCKL---IRPFIPP 448 (720)
T ss_pred ccCC------HHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHhCCC---eeecccc
Confidence 0000 0334433332 33444443 22 2333332 23444445444444444444333332 221110
Q ss_pred -------------------------CC----------ccEEEEEecCCCcccccccccccC---------CCCChHHHHH
Q 047983 147 -------------------------PE----------GSMFVMYCGSEDKCLLKLNYSLLE---------GINSDTEFAL 182 (233)
Q Consensus 147 -------------------------~~----------~g~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 182 (233)
|. .+.|.+ ||.++.+..+... |+ ....+.
T Consensus 449 ~v~~~~~~~~~~~~~~~~~~~w~~~p~~~whgf~~~~~~~~~l-----DP~KltI~t~G~~~~~G~~~~~Gi--pg~~l~ 521 (720)
T PRK13578 449 VVDGKPWQDYPTEQIASDLRFFSFEPGEKWHGFEGYAEDQYFV-----DPCKLLLTTPGIDAETGEYEDFGI--PATILA 521 (720)
T ss_pred cccccccccCchhhhcccccccccccCcccccccccccccccc-----CCceEEEEcCCcCcccccccccCc--cHHHHH
Confidence 11 012222 6777666553321 11 256677
Q ss_pred HHHhccCEEEECCcccCCCCcEEEEeecCHHHHHHHHHHHHHHHHH
Q 047983 183 KLAKEESIIVLPGITVGLKDWLRITFAVEPSAFEIGLGRMKAFYYR 228 (233)
Q Consensus 183 ~ll~~~gi~v~pg~~f~~~~~~Rl~~~~~~~~l~~~~~~l~~~l~~ 228 (233)
+.|.++||.+--.+.+. --+=++++.++++++.+++.|.++-+.
T Consensus 522 ~~L~e~gI~~E~~d~~~--vL~l~s~g~t~~~~~~Lv~aL~~f~~~ 565 (720)
T PRK13578 522 NYLRENGIVPEKCDLNS--ILFLLTPAEDMAKLQQLVAMLARFEKH 565 (720)
T ss_pred HHHHHcCCEEEecCCCe--EEEEeCCCCCHHHHHHHHHHHHHHHHh
Confidence 78877799986433211 123356666788888888888776443
No 333
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=97.87 E-value=0.0013 Score=58.83 Aligned_cols=57 Identities=21% Similarity=0.255 Sum_probs=36.3
Q ss_pred ChHHHHHHHcCcEEEEccccCcccc-CCCccccccccCCccCEEEEccC--ccccC-CCCceEEEEEecCC
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVF-GNTHFVPMGVFGSIVPVLTLGSI--SKRWI-VPGWRLGWLVTSDP 67 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~-~~~~~~~~~~~~~~~~~i~~~s~--sK~~~-~~G~R~G~~~~~~~ 67 (233)
++|.++|++||++||+|++++.... .+.. +..++ + +.+.|| +|.+. +.| |+++++++
T Consensus 176 ~~I~~la~~~gi~vIeDaa~a~G~~~~g~~---~G~~g--d--~~~fSf~~~k~~~~geG---G~l~t~d~ 236 (438)
T PRK15407 176 AAVKAFCDKHNLWLIEDNCDALGSTYDGRM---TGTFG--D--IATLSFYPAHHITMGEG---GAVFTNDP 236 (438)
T ss_pred HHHHHHHHHCCCEEEEECccchhhhcCCee---eeccC--c--eEEEeCCCCCCccccCc---eEEEECCH
Confidence 3789999999999999999986432 2221 22222 1 334454 45443 234 89999874
No 334
>PLN02724 Molybdenum cofactor sulfurase
Probab=97.85 E-value=0.00088 Score=64.42 Aligned_cols=193 Identities=13% Similarity=0.089 Sum_probs=101.9
Q ss_pred cEEEEccccCccccCCCccccccccCCccCEEEEccCccccC-CCCceEEEEEecCCCccccccchhhhh--hh----hh
Q 047983 12 IMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWI-VPGWRLGWLVTSDPNGILQDLGVAFFH--SI----SL 84 (233)
Q Consensus 12 ~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~R~G~~~~~~~~~~~~~~~~~~~~--~~----~~ 84 (233)
+++++|-+..- +..+..+..++.+ ++..|.-|.+| ..| +|.+.+++ .+.+.+.-.... +. ..
T Consensus 231 ~~v~vDaaQ~~----g~~piDv~~~~~D---fl~~S~HK~~GgP~G--~G~L~vr~--~~~~~l~p~~~GGg~~~~~~~~ 299 (805)
T PLN02724 231 WMVLLDAAKGC----GTSPPDLSRYPAD---FVVVSFYKIFGYPTG--LGALLVRR--DAAKLLKKKYFGGGTVAASIAD 299 (805)
T ss_pred eEEEeehhhhc----CCCCCChhhcCCC---EEEEecceeccCCCC--ceEEEEeh--hhhhhhcCCccCCCceEEEecc
Confidence 57999988775 3333444444443 88899999877 345 78888876 333211100000 00 00
Q ss_pred HHh--hhh--hhhhccCcchHH--HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCC------CcccccC------
Q 047983 85 NMR--MDD--YLLLSESVYTTV--GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIP------CITCPKK------ 146 (233)
Q Consensus 85 ~~~--~~~--~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~------~~~~~~~------ 146 (233)
... ... ...+-.+++... .++++.++-...--++++.++.++..+++.+.|++++ ++..+.+
T Consensus 300 ~~~~~~~~~~~~rfE~GT~n~~~i~~l~aal~~l~~ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~ 379 (805)
T PLN02724 300 IDFVKRRERVEQRFEDGTISFLSIAALRHGFKLLNRLTISAIAMHTWALTHYVANSLRNLKHGNGAPVCVLYGNHTFKLE 379 (805)
T ss_pred cceeeccccHHHHhcCCCcchhHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCCCCC
Confidence 000 000 001112222222 3333333211111345667777888888888887764 2332211
Q ss_pred --CCccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC------------------------
Q 047983 147 --PEGSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL------------------------ 200 (233)
Q Consensus 147 --~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~------------------------ 200 (233)
..++.+.+ .+.......+ ....+.+++.++||.++.|..+.+
T Consensus 380 ~~~r~~ivsF----------nv~~~~~~~v--~~~~v~~l~~~~gI~vR~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c 447 (805)
T PLN02724 380 FHIQGPIVTF----------NLKRADGSWV--GHREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHKDLQANFEAGHVC 447 (805)
T ss_pred cccccCEEEE----------EEEcCCCCEe--CHHHHHHHHHhcCcEEeeccccCchHHHHHcCCCHHHHHHHhhcCCcc
Confidence 12344433 1111000011 334566778888999998866531
Q ss_pred -----------CCcEEEEeec--CHHHHHHHHHHHHHHHH
Q 047983 201 -----------KDWLRITFAV--EPSAFEIGLGRMKAFYY 227 (233)
Q Consensus 201 -----------~~~~Rl~~~~--~~~~l~~~~~~l~~~l~ 227 (233)
.+.+|+|++. +.++++.+++.|++..-
T Consensus 448 ~~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~~~~ 487 (805)
T PLN02724 448 WDDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFIISSFV 487 (805)
T ss_pred CchhheecCcccceEEEEcCccCCHHHHHHHHHHHHHHhh
Confidence 2679999996 78899988888887553
No 335
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=97.84 E-value=0.0019 Score=57.64 Aligned_cols=189 Identities=16% Similarity=0.167 Sum_probs=111.5
Q ss_pred hHHHHHHHcCcEEEEccccCc----cc------cCCCcccccc----ccCCccCEEEEccCccccCCC-CceEEEEEecC
Q 047983 2 CIEETTKKLGIMVIADEVYGH----LV------FGNTHFVPMG----VFGSIVPVLTLGSISKRWIVP-GWRLGWLVTSD 66 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~----~~------~~~~~~~~~~----~~~~~~~~i~~~s~sK~~~~~-G~R~G~~~~~~ 66 (233)
+|.++|++||+.||+|-+... |+ |.+. ++. .+..... ..+.|++|..+.+ | |++++.+
T Consensus 202 ~I~elA~~~Gl~Vi~DaAra~gna~fI~~re~~y~~~---~i~ei~~e~~s~aD-~~t~S~~K~~~~~~G---G~i~t~D 274 (460)
T PRK13237 202 AVRELCDKHGIKVFFDATRCVENAYFIKEREEGYQDK---SIKEIVHEMFSYAD-GCTMSGKKDCLVNIG---GFLAMND 274 (460)
T ss_pred HHHHHHHHcCCEEEEECcchhcChhhhcccccccCCC---cHhHHhhhccCcCc-EEEEeCCCCCCCCCc---eEEEECC
Confidence 688999999999999998873 22 2121 221 1111111 5567799987665 5 8888877
Q ss_pred CCccccccchhhhhhhhhHHhhhhh--h--hh-ccCcc-hHH-HHHHHHhhhc-HHHHHHHHHHHHHHHHHHHHHHhhcC
Q 047983 67 PNGILQDLGVAFFHSISLNMRMDDY--L--LL-SESVY-TTV-GAVPQILEKT-EEEFFSKITDILREAADICCDRLKEI 138 (233)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~-~~~~~-~~~-~~~~~~l~~~-~~~~~~~~~~~~~~~~~~l~~~L~~~ 138 (233)
+ +++ .+++.. . .+ +-+.. ... ++++.-+.+. ..+++.. --++.++|.+.|++.
T Consensus 275 ~-eL~--------------~~~r~~~~~~eG~~tygg~~grd~~alAvgl~E~~~~~y~~~----ri~~~~~l~~~L~~~ 335 (460)
T PRK13237 275 E-ELF--------------DEAKELVVVYEGMPSYGGMAGRDMEAMAIGIEESVQYEYIEH----RVGQVRYLGEKLLAA 335 (460)
T ss_pred H-HHH--------------HHHHHhccccCCCcCCCChhhhHHHHHHhHHHhhchHHHHHH----HHHHHHHHHHHHHHC
Confidence 4 343 333333 1 11 11111 111 4555433222 2233333 334567788888775
Q ss_pred CCcccccCCCccEEEEEecCCCccccccccccc-CCC----CChHHHHHHHHhccCEEEECCcccC-------C------
Q 047983 139 PCITCPKKPEGSMFVMYCGSEDKCLLKLNYSLL-EGI----NSDTEFALKLAKEESIIVLPGITVG-------L------ 200 (233)
Q Consensus 139 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~ll~~~gi~v~pg~~f~-------~------ 200 (233)
++.+ ..|.||--++ ++...+ +++ -+...++..+..+.||.-.--+.+. .
T Consensus 336 -Gvpv-~~p~ggH~v~-----------vda~~~lph~~~~~~p~~al~~~ly~~~GiR~~e~g~~~~~~~~~~~~~~~~~ 402 (460)
T PRK13237 336 -GVPI-VEPVGGHAVF-----------LDARRFLPHLPQDQFPAQALAAELYIESGVRSMERGIVSAGRDPKTGENHYPK 402 (460)
T ss_pred -CCce-ecCCCceEEE-----------EEhHHhCCCCCcccChHHHHHHHHHHHhCcCeEeecceecccCCCCCccCCCc
Confidence 5554 5688887777 433221 111 1466788888889999876422331 0
Q ss_pred CCcEEEEeec---CHHHHHHHHHHHHHHHHHH
Q 047983 201 KDWLRITFAV---EPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 201 ~~~~Rl~~~~---~~~~l~~~~~~l~~~l~~~ 229 (233)
-..+|+++.- +.+.++.+.+++..+.++.
T Consensus 403 ~el~rlaiprr~yt~~h~~~v~~~~~~~~~~~ 434 (460)
T PRK13237 403 LELVRLTIPRRVYTYAHMDVVADSVIKLYKHR 434 (460)
T ss_pred cceeeeccccccccHHHHHHHHHHHHHHHHhH
Confidence 1569999983 7888999999988877654
No 336
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=97.83 E-value=0.00096 Score=58.53 Aligned_cols=114 Identities=15% Similarity=0.052 Sum_probs=70.6
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccC-CCCceEEEEEecCCCccccccchhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWI-VPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
+|+++|+++|+.+|+|..|..-.+-. ...++.+ |++.|.||.++ ...+=.|.++++++ .+.
T Consensus 170 ~i~~~A~~~g~~vvVDNTfatP~~q~-----PL~~GaD---IVvhSaTKyl~GHsDvl~G~v~~~~~--~~~-------- 231 (396)
T COG0626 170 AIARLAKAYGALVVVDNTFATPVLQR-----PLELGAD---IVVHSATKYLGGHSDVLGGVVLTPNE--ELY-------- 231 (396)
T ss_pred HHHHHHHhcCCEEEEECCcccccccC-----hhhcCCC---EEEEeccccccCCcceeeeEEecChH--HHH--------
Confidence 68999999999999999998743321 2223443 99999999874 46666675665552 221
Q ss_pred hhhhHHhhh-hhh-hhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 047983 81 SISLNMRMD-DYL-LLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCIT 142 (233)
Q Consensus 81 ~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 142 (233)
..+. ... .++....+. .+++--.+-+-+.-+.++..+|...+.+.|++.|.+.
T Consensus 232 -----~~~~~~~~~~~G~~l~p~----dA~l~lRGlkTL~~Rm~~~~~nA~~IA~~L~~~p~V~ 286 (396)
T COG0626 232 -----ELLFFAQRANTGAVLSPF----DAWLLLRGLRTLALRMERHNENALKIAEFLADHPKVK 286 (396)
T ss_pred -----HHHHHHHHhhcCCCCCHH----HHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCCeE
Confidence 2221 111 233333332 2233233445667777888888999999998865443
No 337
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=97.81 E-value=0.0022 Score=62.54 Aligned_cols=206 Identities=12% Similarity=0.021 Sum_probs=115.6
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccC----CCCceEEEEEecCCCccccccchh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWI----VPGWRLGWLVTSDPNGILQDLGVA 77 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~----~~G~R~G~~~~~~~~~~~~~~~~~ 77 (233)
+|.++|+++|+.+++|-+..--.. .......++.+ ++..|..|+|+ ..|--+|.+.+.+ .+...|.-.
T Consensus 687 eI~~iah~~Galv~vDgAq~~a~~---~l~~p~~~GaD---~~~~s~HK~f~~P~G~GGPg~G~l~~~~--~L~p~lPg~ 758 (993)
T PLN02414 687 EICDIIHDNGGQVYMDGANMNAQV---GLTSPGFIGAD---VCHLNLHKTFCIPHGGGGPGMGPIGVKK--HLAPFLPSH 758 (993)
T ss_pred HHHHHHHHcCCEEEEEecCHHhcc---CcCCccccCCC---EEEecCCccCCcCcccCCCCeeeEEEch--hhcccCCCC
Confidence 689999999999999999864110 11122233443 77888999654 2344589998887 444322110
Q ss_pred hhh--hhhhHHhhhhhhhhcc---CcchHH-HHH--HHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCc
Q 047983 78 FFH--SISLNMRMDDYLLLSE---SVYTTV-GAV--PQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEG 149 (233)
Q Consensus 78 ~~~--~~~~~~~~~~~~~~~~---~~~~~~-~~~--~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~ 149 (233)
.. ......+.. ..+.+. .+..++ .+. ..++...+.+-+++..+....+.+++.+.|++..+.. +..|.+
T Consensus 759 -~v~~~~~~~~r~~-~s~iGt~~~a~~g~al~l~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~~~~~~-~~~~~~ 835 (993)
T PLN02414 759 -PVVPTGGIPRPEK-TQPLGTISAAPWGSALILPISYTYIAMMGSEGLTDASKIAILNANYMAKRLEGHYPVL-FRGKNG 835 (993)
T ss_pred -ccccCCCcccccC-CCCcCCccchhhhhHHHHHHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHhhCCcc-ccCCCC
Confidence 00 000001111 011111 111111 111 2223333556788888999999999999997732333 234444
Q ss_pred cEEEEEecCCCcccccccccccC---CCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec--CHHHHHHHHHHHHH
Q 047983 150 SMFVMYCGSEDKCLLKLNYSLLE---GINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV--EPSAFEIGLGRMKA 224 (233)
Q Consensus 150 g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~--~~~~l~~~~~~l~~ 224 (233)
.++-= +.++...++ ++ +..+...+++ ++||...- -.|...+.+|++... +.++++..++.|.+
T Consensus 836 ~~~hE---------fv~~~~~l~~~~g~-~~~di~krL~-d~Gihapt-~~~pv~~~lmiepTE~~skeelDrf~~al~~ 903 (993)
T PLN02414 836 TCAHE---------FIIDLRPFKNTAGI-EPEDVAKRLM-DYGFHAPT-MSWPVPGTLMIEPTESESKAELDRFCDALIS 903 (993)
T ss_pred Ceeee---------EEEeccccccccCC-CHHHHHHHHH-HcCcEEee-eccccCCEEEEEeeeeCCHHHHHHHHHHHHH
Confidence 31111 112222211 22 2345555555 88998654 335557899998885 78899999999988
Q ss_pred HHHHHh
Q 047983 225 FYYRHA 230 (233)
Q Consensus 225 ~l~~~~ 230 (233)
+..+..
T Consensus 904 i~~e~~ 909 (993)
T PLN02414 904 IREEIA 909 (993)
T ss_pred HHHHHH
Confidence 877764
No 338
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=97.78 E-value=0.0018 Score=56.43 Aligned_cols=205 Identities=19% Similarity=0.179 Sum_probs=99.2
Q ss_pred ChHHHHHHHcCcEEEEccccCccc-cCCCccccccccCCccCEEEEccC--ccccCCCCceEEEEEecCCCccccccchh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLV-FGNTHFVPMGVFGSIVPVLTLGSI--SKRWIVPGWRLGWLVTSDPNGILQDLGVA 77 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~-~~~~~~~~~~~~~~~~~~i~~~s~--sK~~~~~G~R~G~~~~~~~~~~~~~~~~~ 77 (233)
++|.++|++||++||+|-+++.-. |.|...-++ ++ +.+.|| +|.++.. --|.+++.++ ++.+++...
T Consensus 139 ~~i~~la~~~~l~vIEDaAqa~Ga~y~gk~vGt~---Gd----~~~fSF~~~K~ittg--EGGav~tnd~-ela~k~~~l 208 (374)
T COG0399 139 DAIMALAKRHGLPVIEDAAQAHGATYKGKKVGSF---GD----IGAFSFHATKNLTTG--EGGAVVTNDE-ELAEKARSL 208 (374)
T ss_pred HHHHHHHHHcCCeEEEEcchhccCeecCcccccc---cc----eEEEEecCCCCcccc--CceEEEeCCH-HHHHHHHHH
Confidence 478999999999999999998533 233221112 11 222233 5654333 2277777774 555443333
Q ss_pred hhhhhhhHHhhhhhhhhccCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEe
Q 047983 78 FFHSISLNMRMDDYLLLSESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYC 156 (233)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~ 156 (233)
+.|...... ...+.-...+.+... ...+++.-.+ -+.+++..++=++..+...+.|++++++..+..+.+..-.|..
T Consensus 209 r~hG~~~~~-~~~y~~~~~G~N~rm~~iqAAigl~Q-L~~l~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~~~ 286 (374)
T COG0399 209 RNHGLSRDA-VFKYLHEELGYNYRLTEIQAAIGLAQ-LERLDEINERRREIAQIYAEALKGLPGITLPPEPDGAVHAWHL 286 (374)
T ss_pred HHhCcCCCc-cccceeeecccccCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCceeeeee
Confidence 333221100 000101112222222 2333331111 1223333333444455556666666544444444443222200
Q ss_pred cCCCcccccccccccCCCCChHHHHHHHHhccCEE----EECCccc--------------CC-----CCcEEEEeec--C
Q 047983 157 GSEDKCLLKLNYSLLEGINSDTEFALKLAKEESII----VLPGITV--------------GL-----KDWLRITFAV--E 211 (233)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~----v~pg~~f--------------~~-----~~~~Rl~~~~--~ 211 (233)
+ .+.++.. + .+.+.+...|++.||. ..|-... .. ..-+++.+.+ +
T Consensus 287 ~-----~i~~~~~---~--~~R~~l~~~L~~~gi~~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~LP~~p~l~ 356 (374)
T COG0399 287 Y-----TILVDEE---G--ISRDALMESLKEAGVGAVVYFRPLHLQPAYRQLGYFPEGDLPNAEDLSERILSLPLHPNLS 356 (374)
T ss_pred e-----EEEecCC---C--CCHHHHHHHHHhCCCCceEEeeccccchhhhcccccccCCCchHHHHhhCeEEccCCCCCC
Confidence 0 0122221 1 2678888889898554 3442211 00 2446666655 7
Q ss_pred HHHHHHHHHHHHHHHH
Q 047983 212 PSAFEIGLGRMKAFYY 227 (233)
Q Consensus 212 ~~~l~~~~~~l~~~l~ 227 (233)
++++++.++.|++++.
T Consensus 357 ~~~~~~V~~~l~~~~~ 372 (374)
T COG0399 357 EEDVDRVIEALKEVLG 372 (374)
T ss_pred HHHHHHHHHHHHHHhc
Confidence 8888888888887764
No 339
>PRK04311 selenocysteine synthase; Provisional
Probab=97.78 E-value=0.0013 Score=59.13 Aligned_cols=196 Identities=16% Similarity=0.078 Sum_probs=99.2
Q ss_pred ChHHHHHHHcCcEEEEccccCccc----cCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccch
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLV----FGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGV 76 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~----~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~ 76 (233)
++|+++|++||+++|+|...+.+. ++-.....+......+--+++.|.+|.+++| ..|++++++ ++++
T Consensus 240 ~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~LgGp--~~G~i~g~~--~li~---- 311 (464)
T PRK04311 240 AELAALGKEHGLPVVYDLGSGSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLGGP--QAGIIVGKK--ELIA---- 311 (464)
T ss_pred HHHHHHHHHcCCeEEEECCCcccccchhccCCCCCchhhHHhcCCcEEEecCcccccCC--ceEEEEEcH--HHHH----
Confidence 478999999999999999654331 1100111111111112238899999987766 489999877 3442
Q ss_pred hhhhhhhhHHhhhhh---hhhccCcchHH---HHHHHHhhhc-------HHHHHHHHHHHHHHHHHHHHHHhhcCC--Cc
Q 047983 77 AFFHSISLNMRMDDY---LLLSESVYTTV---GAVPQILEKT-------EEEFFSKITDILREAADICCDRLKEIP--CI 141 (233)
Q Consensus 77 ~~~~~~~~~~~~~~~---~~~~~~~~~~~---~~~~~~l~~~-------~~~~~~~~~~~~~~~~~~l~~~L~~~~--~~ 141 (233)
+++.. ..+.....+.. +.+..++... ..+.+....+.+++|.+.+.+.|+... ++
T Consensus 312 ----------~l~~~~~~r~lr~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~ 381 (464)
T PRK04311 312 ----------RLKKHPLKRALRVDKLTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKAALGAAF 381 (464)
T ss_pred ----------HHhhchhHHHHhcchHHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhccCCCe
Confidence 22210 01111112221 2222222111 112234445777788888888887642 11
Q ss_pred ccccCCC-----ccEEEEEecCCCccc-ccccccccCCCCChHHHHHHHHhccC--EEEECCcccCCCCcEEEEeec-CH
Q 047983 142 TCPKKPE-----GSMFVMYCGSEDKCL-LKLNYSLLEGINSDTEFALKLAKEES--IIVLPGITVGLKDWLRITFAV-EP 212 (233)
Q Consensus 142 ~~~~~~~-----~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ll~~~g--i~v~pg~~f~~~~~~Rl~~~~-~~ 212 (233)
..-..+. ||-.-- ++=++. +.++.. +. +...+.+.|++.. |+.+. .++.+.+.+-+ .+
T Consensus 382 ~~~~~~~~~~~gggs~p~---~~~~~~~v~~~~~---~~--~~~~l~~~lr~~~~~i~~r~-----~~~~~~ld~r~~~~ 448 (464)
T PRK04311 382 AVEVVPSFSQVGGGSLPV---DRLPSAAVTLTPK---DR--SLEALAARLRLLPPPVIGRI-----EDGRLLLDLRTLEE 448 (464)
T ss_pred eEEEEEccCccCCCCCcC---CCCCeEEEEEeCC---CC--CHHHHHHHHhcCCCCEEEEE-----ECCEEEEEeCcCCH
Confidence 0000111 110000 000000 112211 11 5566667777644 44432 24677787777 78
Q ss_pred HHHHHHHHHHHHHHH
Q 047983 213 SAFEIGLGRMKAFYY 227 (233)
Q Consensus 213 ~~l~~~~~~l~~~l~ 227 (233)
++++...++|.+++.
T Consensus 449 ~~~~~~~~~~~~~~~ 463 (464)
T PRK04311 449 EDEERLAAALLEALN 463 (464)
T ss_pred HHHHHHHHHHHHHhh
Confidence 888888888887753
No 340
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=97.72 E-value=0.0018 Score=57.83 Aligned_cols=208 Identities=13% Similarity=0.025 Sum_probs=110.2
Q ss_pred ChHHHHHHHc------CcEEEEccccCcccc---CCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccc
Q 047983 1 FCIEETTKKL------GIMVIADEVYGHLVF---GNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGIL 71 (233)
Q Consensus 1 ~~i~~l~~~~------~~~lI~De~y~~~~~---~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~ 71 (233)
++|.++|+++ |+++.+|-+|+.+.. .+.....+. ...---...|..|. +..-.-+|.+..++...+.
T Consensus 206 ~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~---~~~~DSis~s~HK~-~~~P~g~G~l~~r~~~~l~ 281 (431)
T TIGR01788 206 KALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFR---LPRVKSINVSGHKY-GLVYPGVGWVIWRDEEALP 281 (431)
T ss_pred HHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhcC---CCCceEEEECchhc-cCCCCCcEEEEEeChHHcc
Confidence 4799999999 999999999996442 122222221 11112456688996 4334448888887632121
Q ss_pred cccchhhhhhhhhHHhhhhhhhhccCcchHHHHHHHHh--hhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccC-CC
Q 047983 72 QDLGVAFFHSISLNMRMDDYLLLSESVYTTVGAVPQIL--EKTEEEFFSKITDILREAADICCDRLKEIPCITCPKK-PE 148 (233)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~~ 148 (233)
+. ...+..-+.....+ .++..+.+.. .+++.++ ...+..=.++..+...+..+++.+.|++.+++....+ |.
T Consensus 282 ~~---~~~~~~yl~~~~~~-~t~~~sR~g~-~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~~~~~ 356 (431)
T TIGR01788 282 EE---LIFHVNYLGGDEPT-FTLNFSRPAN-QVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEIISDGSG 356 (431)
T ss_pred hh---heecccccCCCCCC-cceecCchHH-HHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeCCCC
Confidence 11 00000000000000 0111111110 1222222 1223345667778888889999999988877765443 45
Q ss_pred ccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCc---ccCCCCcEEEEeec--CHHHHHHHHHHHH
Q 047983 149 GSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGI---TVGLKDWLRITFAV--EPSAFEIGLGRMK 223 (233)
Q Consensus 149 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~---~f~~~~~~Rl~~~~--~~~~l~~~~~~l~ 223 (233)
.+...+ +++.....+. +...+.+.|.++|+.+..-. ......++|+++-. +.+.++..++-|.
T Consensus 357 ~~iV~F----------r~~~~~~~~~--~~~~l~~~L~~~G~~~~~~~~p~~~~~~~~lR~~~~~~~~~~~~~~~~~~~~ 424 (431)
T TIGR01788 357 IPLVAF----------KLKDDADPGY--TLYDLSHRLRERGWIVPAYTLPKNAEDIVVMRIVVREGFSRDLAELLIEDIE 424 (431)
T ss_pred ceEEEE----------EeCCCCCCCc--CHHHHHHHHHHCCCcccCCCCCCccCCeEEEEEEecCCCCHHHHHHHHHHHH
Confidence 554444 1211000011 34456667778898753211 12223468998863 6788888888888
Q ss_pred HHHHHH
Q 047983 224 AFYYRH 229 (233)
Q Consensus 224 ~~l~~~ 229 (233)
+++.+.
T Consensus 425 ~~~~~~ 430 (431)
T TIGR01788 425 AALAYL 430 (431)
T ss_pred HHHHhh
Confidence 877653
No 341
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=97.69 E-value=0.0017 Score=56.65 Aligned_cols=57 Identities=18% Similarity=0.125 Sum_probs=41.1
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCC-CCceEEEEEec
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIV-PGWRLGWLVTS 65 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~-~G~R~G~~~~~ 65 (233)
++|+++|+++|++||+|+.+.....- . ...++.+ |++.|.+|.+++ ..+=.|-++.+
T Consensus 182 ~~l~~la~~~g~~vvVDnTf~~p~~~--~---pL~lGAD---IV~hSaTKyi~Ghsdvi~G~iv~n 239 (409)
T KOG0053|consen 182 EKLARLAHKYGFLVVVDNTFGSPYNQ--D---PLPLGAD---IVVHSATKYIGGHSDVIGGSVVLN 239 (409)
T ss_pred HHHHHHHhhCCCEEEEeCCcCccccc--C---hhhcCCC---EEEEeeeeeecCCcceeeeEEecC
Confidence 47899999999999999999985322 1 2223444 999999998865 45555555554
No 342
>PRK05367 glycine dehydrogenase; Provisional
Probab=97.69 E-value=0.0029 Score=61.66 Aligned_cols=203 Identities=13% Similarity=0.047 Sum_probs=108.5
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccC----CCCceEEEEEecCCCccccccchh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWI----VPGWRLGWLVTSDPNGILQDLGVA 77 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~----~~G~R~G~~~~~~~~~~~~~~~~~ 77 (233)
+|+++|+++|+++++|-++..-... ..+...++.+ ++..|..|.|+ ..|--+|.+.+.. .+...|.-
T Consensus 661 eI~~i~h~~G~~v~VDgA~~~al~~---l~~pg~~GAD---i~~~s~HK~f~~P~G~GGPg~G~l~vr~--~l~p~lpg- 731 (954)
T PRK05367 661 EICEIVHEHGGQVYLDGANMNAQVG---LARPGDIGAD---VSHLNLHKTFCIPHGGGGPGVGPIGVKA--HLAPFLPG- 731 (954)
T ss_pred HHHHHHHHcCCEEEEECcChhhccC---CCChhhcCCC---EEEecCcccCCCCcCCCCCceEEEeecc--cccccCCC-
Confidence 6899999999999999999632211 1111223333 77788889864 2233478888775 23321110
Q ss_pred hhhhhhhHHhhh-hhhhhccCcchHH-HH--HHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCc----
Q 047983 78 FFHSISLNMRMD-DYLLLSESVYTTV-GA--VPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEG---- 149 (233)
Q Consensus 78 ~~~~~~~~~~~~-~~~~~~~~~~~~~-~~--~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~---- 149 (233)
+.... .... .....+.+...++ .+ ...++...+.+-+++..+..-.+.+++.+.|++.-.+. +..|.+
T Consensus 732 --~~v~~-~~~~~~~g~v~ta~~g~al~~~~a~~yi~~~G~~Glr~~a~~~~~~A~Yl~~~L~~~~~~~-~~~~~~~~~~ 807 (954)
T PRK05367 732 --HPVQI-AGGETGIGAVSAAPFGSASILPISWMYIRMMGAEGLRQATEVAILNANYIAKRLKDHYPVL-YTGANGRVAH 807 (954)
T ss_pred --CccCc-CCCCCCcCcchhHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhhcCcc-ccCCCCCccc
Confidence 00000 0000 0011111111122 11 12223333455666777777789999999997732332 222322
Q ss_pred -cEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec--CHHHHHHHHHHHHHHH
Q 047983 150 -SMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV--EPSAFEIGLGRMKAFY 226 (233)
Q Consensus 150 -g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~--~~~~l~~~~~~l~~~l 226 (233)
.++-+ . +++...++ +.+.+.+.|.++|+...- ..|...+.+|++... +.++++..++.|.++.
T Consensus 808 e~i~~~---------~--~~~~~~g~--~~~di~krL~d~G~~~~t-~~~pv~~~l~i~ptE~~s~~elDr~~~al~~i~ 873 (954)
T PRK05367 808 ECILDL---------R--PLKESTGI--TVDDIAKRLIDYGFHAPT-MSFPVAGTLMVEPTESESKAELDRFCDAMIAIR 873 (954)
T ss_pred ceEEEe---------e--cccccCCC--CHHHHHHHHHHCCCeEee-cCCccCCEEEEEeeecCCHHHHHHHHHHHHHHH
Confidence 12222 1 11110022 334455556788998754 335556788888875 7889999888888887
Q ss_pred HHHhh
Q 047983 227 YRHAK 231 (233)
Q Consensus 227 ~~~~~ 231 (233)
++...
T Consensus 874 ~e~~~ 878 (954)
T PRK05367 874 AEIDE 878 (954)
T ss_pred HHHHH
Confidence 76643
No 343
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=97.67 E-value=0.0035 Score=55.86 Aligned_cols=192 Identities=16% Similarity=0.114 Sum_probs=109.7
Q ss_pred hHHHHHHHcCcEEEEccccCc----ccc---CCCccccccc----cCCccCEEEEccCccccCCC-CceEEEEEecCCCc
Q 047983 2 CIEETTKKLGIMVIADEVYGH----LVF---GNTHFVPMGV----FGSIVPVLTLGSISKRWIVP-GWRLGWLVTSDPNG 69 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~----~~~---~~~~~~~~~~----~~~~~~~i~~~s~sK~~~~~-G~R~G~~~~~~~~~ 69 (233)
+|.++|++||+.||+|-+... |+- ++-.-.++.. +-..-. .++.|..|.++.| | |+++..++ +
T Consensus 195 ~I~elA~~~Gl~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~aD-~~~~S~~Kd~~~~~G---G~l~~~d~-~ 269 (450)
T TIGR02618 195 EVRELCEAHGIKVFYDATRCVENAYFIKEREQGYEDKSIAEILKEMMSYAD-GCTMSGKKDCLVNIG---GFLCMNDD-E 269 (450)
T ss_pred HHHHHHHHcCCEEEEEccchhhChhhhhcccccccCCCHHHHHHHHhccCc-EEEEeeccCCCCCCc---eEEEeCCH-H
Confidence 688999999999999998865 221 0111112311 111111 3788999987776 6 77776663 4
Q ss_pred cccccchhhhhhhhhHHhhhhh----hhh-ccCcchHH--HHHHHHhhhcHHHHHHH-HHHHHHHHHHHHHHHhhcCCCc
Q 047983 70 ILQDLGVAFFHSISLNMRMDDY----LLL-SESVYTTV--GAVPQILEKTEEEFFSK-ITDILREAADICCDRLKEIPCI 141 (233)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~--~~~~~~l~~~~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~ 141 (233)
+++ +++.. -.+ +.+..... ++++.-+.. .++. ..+.-..+.++|.+.|++. ++
T Consensus 270 l~~--------------k~r~~~~~~eG~~tyGgla~r~~~ala~gL~e----~~~~~y~~~r~~~a~~La~~L~~~-Gv 330 (450)
T TIGR02618 270 MFQ--------------SAKELVVVFEGMPSYGGLAGRDMEAMAIGIRE----AVDYEYIEHRVKQVRYLGDKLKAA-GV 330 (450)
T ss_pred HHH--------------HHHHHhhhcCCccccCchhhhhHHHHHHHHHH----hhhHHHHHHHHHHHHHHHHHHHHC-CC
Confidence 443 33322 111 11111111 233322222 2221 2222233567888888887 66
Q ss_pred ccccCCCccEEEEEecCCCccccccccccc-CCC----CChHHHHHHHHhccCEEEECCcccC-C------------CCc
Q 047983 142 TCPKKPEGSMFVMYCGSEDKCLLKLNYSLL-EGI----NSDTEFALKLAKEESIIVLPGITVG-L------------KDW 203 (233)
Q Consensus 142 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~ll~~~gi~v~pg~~f~-~------------~~~ 203 (233)
.+ ..|.||.-++ ++...+ +++ -+...++..+..+.||.-.--+.+. + -..
T Consensus 331 pv-~~p~ggh~V~-----------vda~~~lph~~~~~~p~~al~~~ly~~~gir~~e~g~~~~~~~~~~~~~~~~~~el 398 (450)
T TIGR02618 331 PI-VEPVGGHAVF-----------LDARRFLPHIPQDQFPAQSLAASIYVETGVRSMERGIVSAGRNNVTGEHHRPKLEL 398 (450)
T ss_pred cc-cCCCCcceEE-----------EEhHHhCCCCChhhChHHHHHHHHHHHhCccEEeecceecccCCCCCcccCCccce
Confidence 65 5677877777 333321 122 1366778888889999876533331 1 156
Q ss_pred EEEEeec---CHHHHHHHHHHHHHHHHHH
Q 047983 204 LRITFAV---EPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 204 ~Rl~~~~---~~~~l~~~~~~l~~~l~~~ 229 (233)
+|+++.- +.+.++...+++..+.++.
T Consensus 399 ~rlaiprr~yt~~h~~~v~~~~~~~~~~~ 427 (450)
T TIGR02618 399 VRLTIPRRVYTYAHMDVVADGIIKLYKHR 427 (450)
T ss_pred eeeccccccccHhHHHHHHHHHHHHHhhH
Confidence 9999983 7888999999998877654
No 344
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=97.65 E-value=0.00085 Score=62.97 Aligned_cols=191 Identities=12% Similarity=0.071 Sum_probs=96.6
Q ss_pred hHHHHHHHcCcEEEEccccCcc-ccCCC--cccccccc-CCccCEEEEccCccccCCCCce-EEEEEecCCCccccccch
Q 047983 2 CIEETTKKLGIMVIADEVYGHL-VFGNT--HFVPMGVF-GSIVPVLTLGSISKRWIVPGWR-LGWLVTSDPNGILQDLGV 76 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~-~~~~~--~~~~~~~~-~~~~~~i~~~s~sK~~~~~G~R-~G~~~~~~~~~~~~~~~~ 76 (233)
+|+++|..++ |++||+|+.. .|.+. +..++..- ++++.++++.|..|.. +++. .+++...+ . ++.
T Consensus 317 ~I~~~~~~~~--ilvDEAwgah~~F~p~~~~~sam~~ga~~~~~i~vtQStHKtL--~alTQaS~LHvkg--~-vd~--- 386 (714)
T PRK15400 317 FIKKTLDVKS--IHFDSAWVPYTNFSPIYEGKCGMSGGRVEGKVIYETQSTHKLL--AAFSQASMIHVKG--D-VNE--- 386 (714)
T ss_pred HHHHHhCCCC--EEEEccchhhhccCcccCCcChhhcCCCCCCceEEEEchhhcc--cchhHHhHHHHcC--C-CCH---
Confidence 5788888877 7899999954 44431 11223211 2235679999999973 3333 33444433 1 211
Q ss_pred hhhhhhhhHHhhhhhhh--hccCcchHH-H---HHHHHhhh-cHHHHHHHHHHHHHHHHHHHHHHhhcCCC------ccc
Q 047983 77 AFFHSISLNMRMDDYLL--LSESVYTTV-G---AVPQILEK-TEEEFFSKITDILREAADICCDRLKEIPC------ITC 143 (233)
Q Consensus 77 ~~~~~~~~~~~~~~~~~--~~~~~~~~~-~---~~~~~l~~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~------~~~ 143 (233)
.++..... .+++|+.+. + ..+++++. .+.+.++ ...+....+++.+.++++ +..
T Consensus 387 ---------~~~n~a~~m~~STSPsY~l~ASLD~a~~~m~~~~G~~l~~----~~i~~a~~~R~~l~~~~~~~~~w~~~~ 453 (714)
T PRK15400 387 ---------ETFNEAYMMHTTTSPHYGIVASTETAAAMMKGNAGKRLIN----GSIERAIKFRKEIKRLRTESDGWFFDV 453 (714)
T ss_pred ---------HHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhhhHHHHH----HHHHHHHHHHHHHHhCCCcccCceEEe
Confidence 33333322 133444443 2 22333322 2333333 334444444555544433 222
Q ss_pred ccCCC-----------------------ccEEEEEecCCCccccccccccc--------CCCCChHHHHHHHHhccCEEE
Q 047983 144 PKKPE-----------------------GSMFVMYCGSEDKCLLKLNYSLL--------EGINSDTEFALKLAKEESIIV 192 (233)
Q Consensus 144 ~~~~~-----------------------~g~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~ll~~~gi~v 192 (233)
+ .|+ .+++.+ ||.++.+..+.. .++ +...+.+.|.++||.+
T Consensus 454 ~-~~~~~~~~~~w~~~p~~~whgf~~~~~~~~~l-----DP~Klti~tpgi~~~g~~~~~Gi--pg~~v~~~L~e~gI~~ 525 (714)
T PRK15400 454 W-QPDHIDTTECWPLRSDSTWHGFKNIDNEHMYL-----DPIKVTLLTPGMKKDGTMSDFGI--PASIVAKYLDEHGIVV 525 (714)
T ss_pred c-ChhhcccchhcccCccccccCccccccccccc-----CCceEEEEeCCCCCCccccccCC--CHHHHHHHHHHcCCEE
Confidence 1 111 011222 677766655432 123 4566777789999998
Q ss_pred ECCcccCCCCc--EEEEeecCHHHHHHHHHHHHHHHH
Q 047983 193 LPGITVGLKDW--LRITFAVEPSAFEIGLGRMKAFYY 227 (233)
Q Consensus 193 ~pg~~f~~~~~--~Rl~~~~~~~~l~~~~~~l~~~l~ 227 (233)
--.+. .. +=++++.++++++.+++.|.++-+
T Consensus 526 E~~d~----~~iLfl~s~g~t~~~~~~L~~aL~~f~~ 558 (714)
T PRK15400 526 EKTGP----YNLLFLFSIGIDKTKALSLLRALTDFKR 558 (714)
T ss_pred EecCC----CeEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 64332 33 334555578888888877776644
No 345
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=97.63 E-value=0.003 Score=56.52 Aligned_cols=56 Identities=18% Similarity=0.306 Sum_probs=40.0
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEe
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVT 64 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~ 64 (233)
++|.++|+++|+++|+|.++..... ..++ .++. -+++.|++|.++..|--+|-+++
T Consensus 175 ~~I~~la~~~gi~livD~t~a~g~~----~~p~-~~Ga---Divv~S~~K~l~G~gd~~gG~vv 230 (437)
T PRK05613 175 PAVAEVAHRNQVPLIVDNTIATAAL----VRPL-ELGA---DVVVASLTKFYTGNGSGLGGVLI 230 (437)
T ss_pred HHHHHHHHHcCCeEEEECCCccccc----cChH-HhCC---CEEEeeccceecCCCcceeEEEE
Confidence 4789999999999999999865221 1122 2333 38899999998877766666555
No 346
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=97.62 E-value=0.0011 Score=57.96 Aligned_cols=57 Identities=19% Similarity=0.122 Sum_probs=47.1
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecC
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD 66 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~ 66 (233)
+||+.+|+++++.+++|-+++- |.-+..+..++.+ ++..|..|.||.|| +|++.+++
T Consensus 201 ~EI~~icr~~~v~v~~DaAQav----G~i~vDV~eln~D---~~s~s~HK~ygp~~--iGaLYvr~ 257 (428)
T KOG1549|consen 201 KEIVKICREEGVQVHVDAAQAV----GKIPVDVQELNAD---FLSISAHKIYGPPG--IGALYVRR 257 (428)
T ss_pred HHHHHHhCcCCcEEEeehhhhc----CCccccHHHcCch---heeeecccccCCCc--ceEEEEcc
Confidence 5899999999999999999987 4444455555554 77889999999999 99999986
No 347
>PRK12566 glycine dehydrogenase; Provisional
Probab=97.62 E-value=0.0029 Score=60.93 Aligned_cols=203 Identities=11% Similarity=0.065 Sum_probs=108.5
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCC----CCceEEEEEecCCCccccccchh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIV----PGWRLGWLVTSDPNGILQDLGVA 77 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~----~G~R~G~~~~~~~~~~~~~~~~~ 77 (233)
+|+++|+++|+.+++|-+...-. ........++.+ |+.+++.|+|+. .|.=+|.+.+.+ .+. .++
T Consensus 662 eI~~iah~~Galv~vDgA~~~a~---~~l~~Pg~~GAD---i~~~s~HKtf~~P~G~GGP~vG~iav~~--~L~---pfL 730 (954)
T PRK12566 662 EICEVVHQHGGQVYMDGANLNAQ---VGLARPADIGAD---VSHMNLHKTFCIPHGGGGPGMGPIGVRA--HLA---PFV 730 (954)
T ss_pred HHHHHHHHcCCEEEEEeeChhhc---cCCCChhhcCCC---EEEecCCcccCcCccCCCCccchhhhhh--hhh---hhc
Confidence 68999999999999999885211 111112334443 888999998752 233356655554 111 122
Q ss_pred hhhh-hhhH-HhhhhhhhhccCcchH---HHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEE
Q 047983 78 FFHS-ISLN-MRMDDYLLLSESVYTT---VGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMF 152 (233)
Q Consensus 78 ~~~~-~~~~-~~~~~~~~~~~~~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~ 152 (233)
..+. .... .+.+. ...+.....+ +.+...++..-+.+ +.+....-..+.+++.+.|.+..... +.++++.+|
T Consensus 731 p~~P~~d~~G~~~r~-ga~S~~~~gsa~~l~~A~~Yi~~lG~e-Lk~aa~~ailnAnYla~rL~~~~~v~-~~~~~~~~~ 807 (954)
T PRK12566 731 ANHPVVPVEGPDPNN-GAVSAAPWGSASILPISWMYIAMMGPQ-LADASEVAILSANYLANQLGGAFPVL-YRGRNERVA 807 (954)
T ss_pred cCCCCcCCCCCCCCC-CceeecccchHHHHHHHHHHHHHHCHH-HHHHHHHHHHHHHHHHHHhHhhCCCC-cCCCCCCee
Confidence 1110 0000 00111 1111111222 11112222222445 77777777889999999997732332 222222222
Q ss_pred EEEecCCCccccccccccc---CCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec--CHHHHHHHHHHHHHHHH
Q 047983 153 VMYCGSEDKCLLKLNYSLL---EGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV--EPSAFEIGLGRMKAFYY 227 (233)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~--~~~~l~~~~~~l~~~l~ 227 (233)
-- ..+....+ .++ +..+...+++ ++||...- ..|...+.+|++... +.++++..++.|.++.+
T Consensus 808 hE---------fii~~~~l~~~~g~-~~~dvakRL~-d~Gihapt-~~fPv~~~LmIepTE~eskeEIDrf~eAL~~I~~ 875 (954)
T PRK12566 808 HE---------CILDLRPLKAQTGI-SEEDVAKRLM-DYGFHAPT-MSFPVPGTLMVEPTESESKAELDRFVEAMLSIRA 875 (954)
T ss_pred eE---------EEEEccccccccCC-CHHHHHHHHH-HCCcEEeE-EeeccCCEEEEEeeeeCCHHHHHHHHHHHHHHHH
Confidence 21 11222211 123 2445555555 88987544 355557899998885 78899999999988887
Q ss_pred HHh
Q 047983 228 RHA 230 (233)
Q Consensus 228 ~~~ 230 (233)
+..
T Consensus 876 e~~ 878 (954)
T PRK12566 876 EIG 878 (954)
T ss_pred HHH
Confidence 753
No 348
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=97.56 E-value=0.0022 Score=52.94 Aligned_cols=198 Identities=13% Similarity=0.097 Sum_probs=111.7
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHS 81 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~ 81 (233)
.++++|++++++++..-+|.- |.-+.+...+..+ +.++|=.|++. +--++|.+..+. ++-+ .+.+-+.
T Consensus 177 kva~ic~e~gvPlllN~AYt~----Grmpvs~ke~g~D---FiVgSGHKsmA-As~PiGvl~~~e--E~ae--~V~r~Sg 244 (382)
T COG1103 177 KVAKICREYGVPLLLNCAYTV----GRMPVSGKEIGAD---FIVGSGHKSMA-ASAPIGVLAMSE--EWAE--IVLRRSG 244 (382)
T ss_pred HHHHHHHHcCCceEeecceee----ccccccccccCCC---EEEecCccchh-ccCCeeEEeehh--HHHH--HHHhhcc
Confidence 578999999999999999997 4344455555554 88999999954 455899999887 3332 1111000
Q ss_pred h-hhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCccc-ccCCCccEEEEEecCC
Q 047983 82 I-SLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITC-PKKPEGSMFVMYCGSE 159 (233)
Q Consensus 82 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~g~~~~~~~~~ 159 (233)
. .+...+ .+...++...+....+|+. ....+..++.-+.+ ++.+++.+.|++++++.. -..|..--.+.
T Consensus 245 ~~~~~KEv-ellGCT~rGapivTlmASf--P~V~eRVkrWdeEv-~kaR~fv~elEkigg~~qlG~rPk~HdLm~----- 315 (382)
T COG1103 245 RAFPKKEV-ELLGCTVRGAPIVTLMASF--PHVVERVKRWDEEV-EKARWFVAELEKIGGVKQLGERPKNHDLMK----- 315 (382)
T ss_pred ccccccee-eeecccccCchHHHHHhcC--HHHHHHHHHHHHHH-HHHHHHHHHHHHhhhHHHhCCCCcccceee-----
Confidence 0 000000 0111122222222333332 11122222222222 345677788888764331 12343322222
Q ss_pred Cccccccccccc----CCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec-CHHHHHHHHHHHHHHHHHH
Q 047983 160 DKCLLKLNYSLL----EGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV-EPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 160 ~~~~~~~~~~~~----~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~-~~~~l~~~~~~l~~~l~~~ 229 (233)
+..+.+ .......-|+++-|+++||.-+ .-|...|+.+|.-. +.|+++...+.++++++++
T Consensus 316 ------Fetp~f~eIakk~~r~gyFlY~ELK~RgI~GI---~~G~Tk~~K~svyGl~~Eqve~V~~afkeI~eky 381 (382)
T COG1103 316 ------FETPVFHEIAKKHKRKGYFLYEELKKRGIHGI---QPGQTKYFKLSVYGLSWEQVEYVVDAFKEIAEKY 381 (382)
T ss_pred ------ecCchHHHHHHhCcCCceeeHHHHHhcCcccc---ccCceeEEEEEeecCCHHHHHHHHHHHHHHHHhc
Confidence 222211 0111234578889999998733 33346899998876 8999999999999998775
No 349
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=97.54 E-value=0.0039 Score=57.01 Aligned_cols=210 Identities=13% Similarity=0.088 Sum_probs=106.1
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCcc-ccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHF-VPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|+++|+++|+++.+|-+|+....-.+.. ..+..+..- -.+..|..|.+ ..-.-+|.+..++. ...+.+..
T Consensus 285 ~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gle~a--DSit~d~HK~l-~~P~g~G~llvr~~-~~~~~~~~--- 357 (522)
T TIGR03799 285 DEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGIERA--DSVTIDAHKQL-YVPMGAGMVLFKDP-ALMSAIEH--- 357 (522)
T ss_pred HHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCchhC--CEEEEChhhcC-CcCcccEEEEEeCH-HHHHHhcc---
Confidence 479999999999999999999643221111 112222111 15677999953 33355888888763 22221110
Q ss_pred hhhhh----HHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEE
Q 047983 80 HSISL----NMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMY 155 (233)
Q Consensus 80 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~ 155 (233)
+..-+ ...+.. .++..+.+..+..+...+..-+..-++++.+...+.++++.+.|++.+++..+.+|+-+..++
T Consensus 358 ~~~Yl~~~~~~d~~~-~~legsR~~~al~lw~aL~~lG~~G~~~ii~~~~~la~~l~~~L~~~~~~el~~~p~l~iv~F- 435 (522)
T TIGR03799 358 HAEYILRKGSKDLGS-HTLEGSRPGMAMLVYAGLHIIGRKGYELLIDQSIEKAKYFADLIQQQPDFELVTEPELCLLTY- 435 (522)
T ss_pred CcchhcCCCCCcccc-ceeecCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEecCCCccEEEE-
Confidence 00000 000000 011111222111233333333445678888888999999999998888887655565554443
Q ss_pred ecCCCcccccccccc-----cCC----CCChHHHHHHHHhccCEEEECCcccCC-------CCcEEEEeec---CHHHHH
Q 047983 156 CGSEDKCLLKLNYSL-----LEG----INSDTEFALKLAKEESIIVLPGITVGL-------KDWLRITFAV---EPSAFE 216 (233)
Q Consensus 156 ~~~~~~~~~~~~~~~-----~~~----~~~~~~~~~~ll~~~gi~v~pg~~f~~-------~~~~Rl~~~~---~~~~l~ 216 (233)
+-.|..++-.... ... ...-...+.+.+.+.|...+......+ ...+|+++.. +.++++
T Consensus 436 --r~~p~~~~~~l~~~~~~~~~~~~~~~~~ln~~i~~~~~~~G~~~vs~t~l~~~~~~g~~~~~lR~~~~np~tt~~~i~ 513 (522)
T TIGR03799 436 --RYVPEEVQQALAKADEEQREKINELLDRLTKFIQKRQREAGKSFVSRTRLTPAQYDHQPTVVFRVVLANPLTTHEILQ 513 (522)
T ss_pred --EEeChhhcccccccchhhhhhHHHHHHHHHHHHHHHHHhcCCEEEEEEEecccccCCCCcEEEEEEecCCCCCHHHHH
Confidence 3211111100000 000 000013445555566666654333321 2459999986 577777
Q ss_pred HHHHH
Q 047983 217 IGLGR 221 (233)
Q Consensus 217 ~~~~~ 221 (233)
..++.
T Consensus 514 ~~l~~ 518 (522)
T TIGR03799 514 DILDE 518 (522)
T ss_pred HHHHH
Confidence 66543
No 350
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=97.53 E-value=0.0056 Score=52.56 Aligned_cols=202 Identities=13% Similarity=0.056 Sum_probs=118.0
Q ss_pred hHHHHHHHcCcEEEEccccC-ccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYG-HLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~-~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++.++|.+.+.++++|-+|- .++-.+..+.|+. .- -|+..+..|. +-|-|-|.|.-.....-.++ +--+-.
T Consensus 208 R~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFe---y~--DiVTTTTHKs--LRGPRg~mIFyRkGvk~~~~-k~g~~i 279 (477)
T KOG2467|consen 208 RFRKIADKVGAYLMADMAHISGLVAAGVIPSPFE---YC--DIVTTTTHKS--LRGPRGAMIFYRKGVKSIKP-KQGKEI 279 (477)
T ss_pred HHHHHHHhcCceeehhhhhHHHHHhcccCCCccc---cc--ceeecccccc--ccCCcceeEEEeccCCcCCC-CCCCcc
Confidence 46789999999999999997 4443443344442 11 1778888894 56777788776652111110 000000
Q ss_pred hhhhHHhhhhhhh--hccCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEec
Q 047983 81 SISLNMRMDDYLL--LSESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCG 157 (233)
Q Consensus 81 ~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~ 157 (233)
.-.+-.++..... +-.+|.... +++|..|+.-....+++..+.+.+|.+.+.++|.+.+--.+ ......-.+.
T Consensus 280 ~ydlE~kINfaVFP~lQGGPHNhtIaalAvALkQa~tpefk~Yq~qV~~Nakala~~l~~~Gy~lv-tgGTDnHlvL--- 355 (477)
T KOG2467|consen 280 LYDLEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKEYQKQVLKNAKALASALISRGYKLV-TGGTDNHLVL--- 355 (477)
T ss_pred eechhhhhhhhccccccCCCCcchHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHcCceEe-cCCccceEEE---
Confidence 0001133332211 222222222 66776665555567788888999999999999988632222 2222233333
Q ss_pred CCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC-----CCcEEEEeec------CHHHHHHHHHHHHHHH
Q 047983 158 SEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL-----KDWLRITFAV------EPSAFEIGLGRMKAFY 226 (233)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~-----~~~~Rl~~~~------~~~~l~~~~~~l~~~l 226 (233)
+++... ++ +-..+.+.|+..+|...--..+|. ++.+|+.... .++++++..+-|.+.+
T Consensus 356 --------vDLr~~-G~--dGarvE~vle~~~I~~NKNtvpGD~Sal~PgGiRiGtPAmTsRG~~e~df~~v~~fi~~av 424 (477)
T KOG2467|consen 356 --------VDLRPK-GV--DGARVEKVLELCHIALNKNTVPGDKSALSPGGIRIGTPAMTSRGFGEEDFEKVADFIDRAV 424 (477)
T ss_pred --------Eecccc-CC--chHHHHHHHHHhhhhhcCCcCCCCccccCCCceeccchhhcccCccHHHHHHHHHHHHHHH
Confidence 355432 34 677888889888999877666664 6789995432 4667776665555444
No 351
>PRK02769 histidine decarboxylase; Provisional
Probab=97.50 E-value=0.014 Score=51.38 Aligned_cols=186 Identities=13% Similarity=0.055 Sum_probs=104.1
Q ss_pred ChHHHHHHHcC---cEEEEccccCccccCCC-ccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccch
Q 047983 1 FCIEETTKKLG---IMVIADEVYGHLVFGNT-HFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGV 76 (233)
Q Consensus 1 ~~i~~l~~~~~---~~lI~De~y~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~ 76 (233)
++|.++|+++| +++.+|-+|+.+...-. ...++. ... .--.+..|..|. ++.-..+|.+..++ ..++.+..
T Consensus 180 ~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~~~d-~~~-~vDsis~s~HK~-~~~P~g~G~l~~r~--~~~~~~~~ 254 (380)
T PRK02769 180 KEIQEILKKIGIDDYYIHADAALSGMILPFVNNPPPFS-FAD-GIDSIAISGHKF-IGSPMPCGIVLAKK--KYVERISV 254 (380)
T ss_pred HHHHHHHHHhCCCceEEEEEecccceeecccCccccCC-ccC-CCCEEEECCccc-CCCCCCcEEEEEeh--hhhhhccc
Confidence 47999999998 79999999997554211 111111 111 222556788997 44445689988887 23321100
Q ss_pred hhhhhhhhHHhhhhh-hhhccCcchH-HHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEE
Q 047983 77 AFFHSISLNMRMDDY-LLLSESVYTT-VGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVM 154 (233)
Q Consensus 77 ~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~ 154 (233)
- . ..+... .++..+.+.. ..++...+.....+-.++..+...+..+++.+.|++. ++..+..|.....++
T Consensus 255 ~----~---~yl~~~d~t~~GSR~g~~~l~lw~aL~~lg~~G~~~~~~~~~~la~~l~~~L~~~-g~~~~~~p~~~~v~f 326 (380)
T PRK02769 255 D----V---DYIGSRDQTISGSRNGHTALLLWAAIRSLGSKGLRQRVQHCLDMAQYAVDRLQAN-GIPAWRNPNSITVVF 326 (380)
T ss_pred C----c---cccCCCCCCccCCCCcHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhC-CCEEEcCCCceEEEE
Confidence 0 0 000000 0111122221 1333333433344556778888888999999999875 555456676444433
Q ss_pred EecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec--CHHHHHHHHHHHHHHHHHH
Q 047983 155 YCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV--EPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~--~~~~l~~~~~~l~~~l~~~ 229 (233)
+.+ +.+. . +|..+.+- .+++|+++.. +.+.+++.++.|.+.+...
T Consensus 327 ------------~~~-------~~~~----~--~~w~l~~~-----~~~~hi~~~~~~~~~~~~~f~~dl~~~~~~~ 373 (380)
T PRK02769 327 ------------PCP-------SERI----W--KKWHLATS-----GNQAHIITMPHHNKQQIDSLIDELIFDLKNP 373 (380)
T ss_pred ------------cCC-------CHHH----H--hCeeEccc-----CCEEEEEECCCCCHHHHHHHHHHHHHHHhcc
Confidence 321 2221 1 34444432 2588998885 7778888888887766543
No 352
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=97.49 E-value=0.0011 Score=59.68 Aligned_cols=148 Identities=15% Similarity=0.065 Sum_probs=86.7
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCC-CccccccccCCccC-EEEEccCccccCCCCceEEEEEecCCCccccccchhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGN-THFVPMGVFGSIVP-VLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAF 78 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~-~~~~~~~~~~~~~~-~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~ 78 (233)
++|.++|+++++++.+|-+|+.+...= .+... ....- ++ .-+..++.|. +.+=.-+||+..++.+.+.+.+.+.
T Consensus 227 ~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~-~~f~l-~~vdSIt~d~HK~-g~aP~~~G~il~rd~e~l~~~~~~~- 302 (460)
T COG0076 227 EELADIAEEYGIWLHVDAAFGGFLLPFLEPDGR-WDFGL-EGVDSITVDGHKY-GLAPIGCGVVLFRDEEALRRILIFA- 302 (460)
T ss_pred HHHHHHHHHcCCcEEEEccccceeecccCccch-hhcCC-CCceEEEECcccc-cCCCCCceEEEEECHHHhhhhhhcc-
Confidence 479999999999999999999887531 11111 11111 12 2334588997 8888889999999964344321111
Q ss_pred hhhhhhHHhhhhhhhhccCcch-HHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEE
Q 047983 79 FHSISLNMRMDDYLLLSESVYT-TVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVM 154 (233)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~ 154 (233)
...++.....++ +...+.+. ++.+....+...+.+-.+++.+...+.++++.+.|++.+.+.....|.....++
T Consensus 303 -~~yl~~~~~~~~-ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~p~l~~V~f 377 (460)
T COG0076 303 -DYYLPGGGIPNF-TILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLAEELEKLGDFELVNEPELPIVAF 377 (460)
T ss_pred -cccCCCCCcCce-eEeeccchHHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhCCCcEeecCCccceEEE
Confidence 000000011111 11111222 223333333334556677888888899999999999987666656676555554
No 353
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=97.49 E-value=0.0056 Score=57.57 Aligned_cols=64 Identities=16% Similarity=0.135 Sum_probs=39.3
Q ss_pred Cccccccccccc--------CCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeecCHHHHHHHHHHHHHHHH
Q 047983 160 DKCLLKLNYSLL--------EGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAVEPSAFEIGLGRMKAFYY 227 (233)
Q Consensus 160 ~~~~~~~~~~~~--------~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~~~~~l~~~~~~l~~~l~ 227 (233)
||.++.+..+.. .++ +...+.+.|+++||.+--.+.+. --+=++++.++++++.+++.|.++-+
T Consensus 487 DP~KltI~t~g~~~~g~~~~~Gi--~g~~l~~~L~e~gI~~E~~d~~~--vL~l~s~g~t~~~~~~L~~aL~~f~~ 558 (713)
T PRK15399 487 DPVKVTILTPGMDEQGNMSEEGI--PAALVAKFLDERGIVVEKTGPYN--LLFLFSIGIDKTKAMGLLRGLTEFKR 558 (713)
T ss_pred CCceEEEEecCcccccccccCCC--CHHHHHHHHHHcCCEEEecCCCe--EEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 677766655422 133 55667777899999986533211 11234555578888888887777644
No 354
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=97.47 E-value=0.0037 Score=53.43 Aligned_cols=179 Identities=15% Similarity=0.050 Sum_probs=94.6
Q ss_pred ChHHHHHHHcCcEEEEccccCc--cccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGH--LVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAF 78 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~--~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~ 78 (233)
++|.++|++||+.|-.|=+=-. .+..+ .+.+.+...-. ++..++||..+.|+ |-|+.-+. ++++++
T Consensus 153 ~~i~~~~k~~~l~LHmDGAR~~nA~valg---~~~~~~~~~~D-~v~~~~tK~g~~~~---gAiv~gn~-~~~~~a---- 220 (342)
T COG2008 153 EAISAVCKEHGLPLHMDGARLANALVALG---VALKTIKSYVD-SVSFCLTKGGGAPV---GAIVFGNR-DFAKRA---- 220 (342)
T ss_pred HHHHHHHHHhCCceeechHHHHHHHHHcC---CCHHHHHhhCC-EEEEecccCCccee---eeEEEcCH-HHHHHH----
Confidence 3688999999999999865322 12122 22322222222 55668899855454 88887764 455422
Q ss_pred hhhhhhHHhhhhhhhhccCcchHH----HHHHHHhhhcHHHHHHHHHHHHHHH--HHHHHHHhhcCCCcccccCCCccEE
Q 047983 79 FHSISLNMRMDDYLLLSESVYTTV----GAVPQILEKTEEEFFSKITDILREA--ADICCDRLKEIPCITCPKKPEGSMF 152 (233)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~~~~~~~~~~~~~~~~--~~~l~~~L~~~~~~~~~~~~~~g~~ 152 (233)
.+.+.+.. ....+. +....++++.. ........| ...|.+.++..++.....+|+ ...
T Consensus 221 -------~~~rK~~G---gl~~k~r~laA~~~~~l~~~~-----~~~~~~Han~mA~~La~~~~~~~G~~~~~~~~-tN~ 284 (342)
T COG2008 221 -------RRWRKRAG---GLMRKARFLAAQGLYALEDDV-----WRLAADHANAMAARLAEGLEAKPGVKLAFPVE-TNM 284 (342)
T ss_pred -------HHHHHHhc---ccHhhhhHHHHHHHHHHhccH-----HHHHHHHHHHHHHHHHHhhhhcCCceeccCCc-ccE
Confidence 12222211 222333 22222232221 122333344 777788888766777533344 444
Q ss_pred EEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEee--cCHHHHHHHHHHHHHHH
Q 047983 153 VMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFA--VEPSAFEIGLGRMKAFY 226 (233)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~--~~~~~l~~~~~~l~~~l 226 (233)
++ +.++... + +.......+.+.|+.+.+++ .-+|+..+ .+++++++.+..+++++
T Consensus 285 vf---------~~l~~~~---i--~~l~~~~~~~~~~~~~~~~~-----~~vRfvts~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 285 VF---------VRLPESA---I--EALRLAGALFYRGVLIGAHG-----EIVRFVTSWATSEEDVDELVAAIKALL 341 (342)
T ss_pred EE---------EECChHH---H--HHHHhhchhheeeeeccCCC-----ceEEEEeeccCCHHHHHHHHHHHHHhh
Confidence 44 3454221 0 22333334445666666543 35777555 58999998888887654
No 355
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=97.47 E-value=0.0046 Score=56.21 Aligned_cols=201 Identities=15% Similarity=0.126 Sum_probs=109.7
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|++.+..+++|+..||++.-..... +..+-.+.+ ...+++..|..|. ..+.....++...+. ..+ ..
T Consensus 185 ~~i~~~~~~~~a~v~~deah~~~~~~~-~~l~~~~~~-~~~~~~tqS~HK~-l~alSQaS~iHv~~~-~~~----~~--- 253 (557)
T COG1982 185 RKIVELLHHYGAWVLYDEAHPAHFDFS-PMLPESALN-GGADFVTQSTHKL-LAALSQASMIHVKDG-RAV----NH--- 253 (557)
T ss_pred HHHHHHHhhcCceEEhhhcCccccccc-ccCcchhhh-cCceEEEechhhh-hhhhhhhHHHhhCCC-ccC----CH---
Confidence 368899999999999999998643221 111112222 3567999999998 555656666766652 111 11
Q ss_pred hhhhHHhhhhhhhh--ccCcchHH-HHH--HHHhhhc-HHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCC------
Q 047983 81 SISLNMRMDDYLLL--SESVYTTV-GAV--PQILEKT-EEEFFSKITDILREAADICCDRLKEIPCITCPKKPE------ 148 (233)
Q Consensus 81 ~~~~~~~~~~~~~~--~~~~~~~~-~~~--~~~l~~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~------ 148 (233)
.++.....+ +++|+.+. +.+ +++.... +.+-.++..+..-+.++.+++..++++++..+.++.
T Consensus 254 -----~r~nea~~~h~STSPsY~l~ASlD~Ar~~~~~~G~~l~~~~~~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (557)
T COG1982 254 -----ERFNEALMMHQSTSPSYPLMASLDVARMQEGNAGRELWQEVIDEAIDFRKALRRLINEIGFFPVLQPEKLDPPTG 328 (557)
T ss_pred -----HHHHHHHHHHccCCchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccccccCCccc
Confidence 444443332 33333333 211 3333222 333333334444455555555555555444332221
Q ss_pred --------ccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeecCHHHHHHHHH
Q 047983 149 --------GSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAVEPSAFEIGLG 220 (233)
Q Consensus 149 --------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~~~~~l~~~~~ 220 (233)
...|+. ||.++.+..+.. |+ ....+...|+++|++..-.+. ..+=+.+.....+....++
T Consensus 329 whgf~~~~~~~~~l-----DP~Klti~tp~~-Gi--pg~~v~~~L~e~gii~e~~~d----~~~lll~~~~~gk~~~lv~ 396 (557)
T COG1982 329 WHGFEDYADDQYFL-----DPTKLTITTPEF-GI--PGAIVAKYLREHGIIPEETGD----YSNLLLFSPGIGKWQTLVD 396 (557)
T ss_pred ccccccccccceec-----cccEEEEecCCC-CC--cHHHHHHHHHHcCCeeeecCC----ceeeEEeeeccchHHHHHH
Confidence 125555 777766665432 55 677788888888988765332 2222333332255566777
Q ss_pred HHHHHHHHH
Q 047983 221 RMKAFYYRH 229 (233)
Q Consensus 221 ~l~~~l~~~ 229 (233)
+|.++.+.+
T Consensus 397 ~L~~f~r~~ 405 (557)
T COG1982 397 RLLEFKRRY 405 (557)
T ss_pred HHHHHHHhh
Confidence 777777654
No 356
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=97.38 E-value=0.017 Score=49.86 Aligned_cols=58 Identities=19% Similarity=0.282 Sum_probs=44.7
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecC
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD 66 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~ 66 (233)
|.|+++|+++++++|+|..+..=.+ ..|+. .+.+ |++.|+||..|.-|--+|-++...
T Consensus 167 e~ia~iAh~~gvpliVDNT~atpyl----~rP~~-hGAD---IVvHS~TK~igGhGt~iGG~iVD~ 224 (426)
T COG2873 167 EAIAEIAHRHGVPLIVDNTFATPYL----CRPIE-HGAD---IVVHSATKYIGGHGTAIGGVIVDG 224 (426)
T ss_pred HHHHHHHHHcCCcEEEecCCCccee----cchhh-cCCC---EEEEeecccccCCccccceEEEeC
Confidence 5789999999999999998875211 11222 2232 889999999999999999988866
No 357
>PRK05367 glycine dehydrogenase; Provisional
Probab=97.35 E-value=0.0093 Score=58.22 Aligned_cols=187 Identities=16% Similarity=0.165 Sum_probs=104.8
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccc-----cCCCCceEEEEEecCCCccccccch
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKR-----WIVPGWRLGWLVTSDPNGILQDLGV 76 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~-----~~~~G~R~G~~~~~~~~~~~~~~~~ 76 (233)
+|+++|+++|+++++|-....+... .+...++.+ |+++|.-|. ||+|| .|++.+++ ++.+.|.-
T Consensus 226 ~i~~~ah~~Gal~~vda~~~Al~~l----~~pge~GaD---i~vgs~qkfg~P~g~GGP~--aGflavr~--~~~r~lpg 294 (954)
T PRK05367 226 ALIAAAHARGALVAVAADLLALTLL----TPPGEMGAD---IAVGSAQRFGVPMGFGGPH--AAYFAVRD--AYKRSMPG 294 (954)
T ss_pred HHHHHHHHcCCEEEEEehhhhccCC----CChhhcCCC---EEEeeCcccCCCCCCCCCC--EEEEEECH--HHHhhCCC
Confidence 6899999999999997533222111 123334444 788888887 78887 89999987 45443321
Q ss_pred hhhhh----hhhHHhhh-------hhhh---hccCcch-HH--HHHHHH-hhhcHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 047983 77 AFFHS----ISLNMRMD-------DYLL---LSESVYT-TV--GAVPQI-LEKTEEEFFSKITDILREAADICCDRLKEI 138 (233)
Q Consensus 77 ~~~~~----~~~~~~~~-------~~~~---~~~~~~~-~~--~~~~~~-l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 138 (233)
. +.. ......++ +.+. .+++..+ ++ +.++.+ +.-....=++++.++...+..++.+.|+..
T Consensus 295 r-ivG~s~d~~g~~~~~lalqtReqhiRrekaTsNict~qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~~ 373 (954)
T PRK05367 295 R-IVGVSVDAAGNPALRLALQTREQHIRREKATSNICTAQVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRAL 373 (954)
T ss_pred C-eeeeecccCCCcccccccccccccccccccccccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhc
Confidence 1 010 00000000 0001 1112221 11 233332 111233446777888899999999999774
Q ss_pred CCcccccCCCccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec--CHHHHH
Q 047983 139 PCITCPKKPEGSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV--EPSAFE 216 (233)
Q Consensus 139 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~--~~~~l~ 216 (233)
++..... .+|-. +.+..+. +.+.+.+.|.++||.+.. .+ .+.+|+|+.. ++++++
T Consensus 374 -G~~~~~~---~~f~~---------~~~~~~~------~~~~i~~~l~~~gi~~~~---~~-~~~l~is~~e~~t~~did 430 (954)
T PRK05367 374 -GLEVVHD---SFFDT---------LTVEVGG------DAAAVLARALAAGINLRR---VD-DDHVGISLDETTTREDLA 430 (954)
T ss_pred -CcccCCC---CCCCe---------EEEeCCC------CHHHHHHHHHHCCceecc---cc-CCEEEEEecccCCHHHHH
Confidence 4443222 22222 3233221 445556666788999832 11 4679999985 788899
Q ss_pred HHHHHHH
Q 047983 217 IGLGRMK 223 (233)
Q Consensus 217 ~~~~~l~ 223 (233)
..++.|.
T Consensus 431 ~l~~~l~ 437 (954)
T PRK05367 431 ALLAVFG 437 (954)
T ss_pred HHHHHHc
Confidence 8888886
No 358
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=97.34 E-value=0.0033 Score=54.82 Aligned_cols=176 Identities=21% Similarity=0.167 Sum_probs=80.5
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccC--ccccCCCCceEEEEEecCCCccccccchhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSI--SKRWIVPGWRLGWLVTSDPNGILQDLGVAF 78 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~--sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~ 78 (233)
++|.++|+++|++||+|-+++....-... +....+ + +.+.|| +|..... --|.++++++ ++.+.+...+
T Consensus 130 ~~i~~~~~~~~i~lIeD~a~a~g~~~~g~--~~G~~g--d--~~~fSf~~~K~i~~g--eGG~v~~~~~-~~~~~~~~~~ 200 (363)
T PF01041_consen 130 DAIRAIARKHGIPLIEDAAQAFGARYKGR--PVGSFG--D--IAIFSFHPTKIITTG--EGGAVVTNDP-ELAERARALR 200 (363)
T ss_dssp HHHHHHHHHTT-EEEEE-TTTTT-EETTE--ETTSSS--S--EEEEESSTTSSS-SS--S-EEEEESTH-HHHHHHHHHT
T ss_pred HHHHHHHHHcCCcEEEccccccCceeCCE--eccCCC--C--ceEecCCCCCCCcCC--CCeeEEecHH-HHHHHhhhhh
Confidence 36899999999999999999975432211 111122 2 455565 6865322 2288888774 3333221111
Q ss_pred hhhhhhHHhhhhhhhhc-cCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccE-EEEE
Q 047983 79 FHSISLNMRMDDYLLLS-ESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSM-FVMY 155 (233)
Q Consensus 79 ~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~-~~~~ 155 (233)
.+.... .....+.... .+.+... ...+++...+ -+.+++..+.-+++.+.+.+.|..++++..+..+.+.. ..|+
T Consensus 201 ~~g~~~-~~~~~~~~~~~~g~n~rm~~~~AAigl~Q-L~~L~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~ 278 (363)
T PF01041_consen 201 NHGRSR-DAFRRYRHELPPGYNFRMSELQAAIGLAQ-LKRLDEIIARRRENAQRYREALAGIPGIKPPPIPDGAERSSYY 278 (363)
T ss_dssp BTTEET-SECSTTEESSSS--B-B-BHHHHHHHHHH-HHTHHHHHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTEEBCES
T ss_pred ccCcCc-cccccccccccCCcccccHHHHHHHHHHH-HHHhhhhHHHHHHHHHHHHHHHhcCCCcccccccccccccccc
Confidence 111000 0000000000 1111111 2222221111 13455556666677788888888876653222233221 1110
Q ss_pred ecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCc
Q 047983 156 CGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGI 196 (233)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~ 196 (233)
.+ .+.++... . .+.+.+.+.|++.||...+..
T Consensus 279 ~f-----~i~~~~~~--~--~~rd~l~~~L~~~GI~~~~~~ 310 (363)
T PF01041_consen 279 RF-----PIRLPDEA--L--ADRDELVEALRARGIETRPHY 310 (363)
T ss_dssp SE-----EEEETCCG--C--STHHHHHHHHHHTTBEEBCST
T ss_pred cc-----cccccccc--c--chHHHHHHHHHHCCCcccccc
Confidence 00 02233211 0 157777888889999998855
No 359
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=97.32 E-value=0.017 Score=50.70 Aligned_cols=99 Identities=15% Similarity=0.088 Sum_probs=63.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCcccccC-C--CccEEEEEecCCCcccccccccccCCCCCh-----HHHHHHHHhcc
Q 047983 117 FSKITDILREAADICCDRLKEIPCITCPKK-P--EGSMFVMYCGSEDKCLLKLNYSLLEGINSD-----TEFALKLAKEE 188 (233)
Q Consensus 117 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ll~~~ 188 (233)
++.+.++.+++++.+++.+++++.+..+.. + .+..... +.++.+....+..+ ...+.+.|+++
T Consensus 261 le~~~~Rh~~~a~~l~~~l~~lg~l~~~~~~~~~rS~tvt~---------v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 331 (374)
T TIGR01365 261 LKPLIARADDNLAVLEAFVAKNNWIHFLAETPEIRSNTSVC---------LKVVDPAIDALDEDAQADFAKELISTLEKE 331 (374)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCcccCCCChhhcCCCeEE---------EEeCCccccccccchhhHHHHHHHHHHHHC
Confidence 788899999999999999999863432221 1 1222222 23322210000002 45677888888
Q ss_pred CEEEECCcccCCCCcEEE-Eeec-CHHHHHHHHHHHHH
Q 047983 189 SIIVLPGITVGLKDWLRI-TFAV-EPSAFEIGLGRMKA 224 (233)
Q Consensus 189 gi~v~pg~~f~~~~~~Rl-~~~~-~~~~l~~~~~~l~~ 224 (233)
||.+-+|..--....+|| +++. +.++++.++..|.=
T Consensus 332 gi~i~~G~~~~~~~~fRIg~~G~i~~~di~~l~~~l~~ 369 (374)
T TIGR01365 332 GVAYDIGSYRDAPSGLRIWCGATVEKSDLECLCPWLDW 369 (374)
T ss_pred CEEEeccccccCCCceEEecCCcCCHHHHHHHHHHHHH
Confidence 999988765433578999 4554 88999988888753
No 360
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=97.29 E-value=0.04 Score=46.54 Aligned_cols=197 Identities=14% Similarity=0.054 Sum_probs=105.3
Q ss_pred HHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCC-CCceEEEEEecCCCccccccchhhhhh
Q 047983 3 IEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIV-PGWRLGWLVTSDPNGILQDLGVAFFHS 81 (233)
Q Consensus 3 i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~-~G~R~G~~~~~~~~~~~~~~~~~~~~~ 81 (233)
+-++|++|++.+++|-+-+.- + .. + .+|.+..-+.+..--|+.++ ||+-+ +..++. -.+ ++.+-++
T Consensus 165 ~g~lc~k~~~lllVD~VaSlg---g-t~--F-~mDewgVDvaytgSQKaL~aP~GLsi--isfS~k--a~~--~~~~rK~ 231 (385)
T KOG2862|consen 165 SGELCHKHEALLLVDTVASLG---G-TE--F-EMDEWGVDVAYTGSQKALGAPAGLSI--ISFSDK--ALE--AIRDRKT 231 (385)
T ss_pred HHHHhhcCCeEEEEechhhcC---C-cc--c-eehhhcccEEEecchhhcCCCCCcce--eecCHH--HHH--HHhhccC
Confidence 468999999999999998762 2 21 2 24555544666677888766 45444 444441 111 1111000
Q ss_pred ---hhhH--Hhhhhhhh-------hccCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCC
Q 047983 82 ---ISLN--MRMDDYLL-------LSESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPE 148 (233)
Q Consensus 82 ---~~~~--~~~~~~~~-------~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~ 148 (233)
.... .++..+.. +--.++.+. .++-+.|..-.++=+++..++-++..+++...|++++-..+ ...+
T Consensus 232 ~~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~~GLq~f-v~~e 310 (385)
T KOG2862|consen 232 KPVSFYFDILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAALALIAEEGLENSWRRHREMSKWLKLSLEALGLQLF-VVDE 310 (385)
T ss_pred CceEEEEeHHhhcchhccCCcccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccce-ecCh
Confidence 0000 11111111 011223333 33333332224455667778888888999999988532111 1111
Q ss_pred c---cEEEEEecCCCcccccccccccCCCCChHHHHHHHHhcc-CEEEECCcccCC--CCcEEEEeec---CHHHHHHHH
Q 047983 149 G---SMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEE-SIIVLPGITVGL--KDWLRITFAV---EPSAFEIGL 219 (233)
Q Consensus 149 ~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~-gi~v~pg~~f~~--~~~~Rl~~~~---~~~~l~~~~ 219 (233)
. .-.-. +.+|. ++ |...+...+..+ ++.+. .+.++ ..++||.+.. +.+.++...
T Consensus 311 ~~rlptvtt---------v~vp~----gv--Dw~dVv~~~~~~~~vei~--gglg~~~gKv~RIGl~gcna~~e~i~~v~ 373 (385)
T KOG2862|consen 311 ELRLPTVTT---------VKVPY----GV--DWKDVVAYAMSHYVVEIG--GGLGPTVGKVFRIGLLGCNANVEYIDNVV 373 (385)
T ss_pred hhccCccee---------eecCC----CC--CHHHHHHHHHHhcCEEec--cccCCCcccEEEEEEeeccCCcHHHHHHH
Confidence 1 11111 33443 33 555555555555 55553 34444 6899998763 688899999
Q ss_pred HHHHHHHHHHh
Q 047983 220 GRMKAFYYRHA 230 (233)
Q Consensus 220 ~~l~~~l~~~~ 230 (233)
+.|+..+.+.+
T Consensus 374 ~ll~~alq~~~ 384 (385)
T KOG2862|consen 374 ELLKLALQRKK 384 (385)
T ss_pred HHHHHHHhhcc
Confidence 99998887654
No 361
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=97.28 E-value=0.0051 Score=55.29 Aligned_cols=61 Identities=21% Similarity=0.054 Sum_probs=40.4
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCC-----Ccc--ccccccCCccCEEEEccCccccCCCCceEEEEEecC
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGN-----THF--VPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD 66 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~-----~~~--~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~ 66 (233)
++|+++|++||+++|+|...+.+...+ ..+ ......+. -+++.|.+|.+++| ..|++++++
T Consensus 235 ~~I~~la~~~g~~vivD~~sG~l~~~~~~gl~~~p~~~~~~~~Ga---Div~fSg~K~LgGp--~~G~i~g~~ 302 (454)
T TIGR00474 235 AELVALGREHGLPVMEDLGSGSLVDLSRYGLPDEPTVQEVIAAGV---DLVTFSGDKLLGGP--QAGIIVGKK 302 (454)
T ss_pred HHHHHHHHHcCCeEEEECCCcccccchhccCCCCcccccHhHcCC---CEEEecCccccCCC--eEEEEEECH
Confidence 478999999999999998644431110 111 11112223 28899999988766 479999887
No 362
>PRK06434 cystathionine gamma-lyase; Validated
Probab=97.12 E-value=0.025 Score=49.81 Aligned_cols=112 Identities=12% Similarity=0.044 Sum_probs=61.7
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCC-ceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|.++|++++ +++|.++..-. ...++. ...+ +++.|.+|.++.+| .=-|.+++.++ ++.
T Consensus 168 ~~I~~la~~~~--lvVD~t~~s~~----~~~pl~-~gaD---ivv~S~tK~i~G~~d~~gG~vv~~~~-~~~-------- 228 (384)
T PRK06434 168 KNVSSFCHEND--VIVDATFASPY----NQNPLD-LGAD---VVIHSATKYISGHSDVVMGVAGTNNK-SIF-------- 228 (384)
T ss_pred HHHHHHHHHcC--eEEECCCCCcc----cCCchh-cCCC---EEEeecccccCCCCCceEEEEecCcH-HHH--------
Confidence 37899999998 45699974311 111232 2232 88899999887644 43466666442 222
Q ss_pred hhhhhHHhhhhhh-hhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCc
Q 047983 80 HSISLNMRMDDYL-LLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCI 141 (233)
Q Consensus 80 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 141 (233)
.+++... ..+...++..+ .++ ...-+.+..+.++-.++...+.+.|+..|.+
T Consensus 229 ------~~~~~~~~~~G~~~~~~~A---~l~-~~gL~tL~~R~~r~~~~a~~~a~~L~~~p~v 281 (384)
T PRK06434 229 ------NNLVERRKTLGSNPDPIQA---YLA-LRGLKTLGLRMEKHNKNGMELARFLRDSKKI 281 (384)
T ss_pred ------HHHHHHHHhcCCCCCHHHH---HHH-HhCCCcHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 3333221 22222222212 221 1122345666677788888888888887654
No 363
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=97.11 E-value=0.031 Score=46.97 Aligned_cols=190 Identities=13% Similarity=0.167 Sum_probs=106.0
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHS 81 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~ 81 (233)
.+++..+.+|-..|.||+...|..-|.+... ...++-+--|-++.|. ...|.+++.+++.+ ++.
T Consensus 234 ~Va~~Vr~aGGv~IaDEVQvGFGRvG~hyWa---fq~y~fiPDIVtmgKp-mGNGhPVa~Vattk--------eIA---- 297 (452)
T KOG1403|consen 234 AVADAVRSAGGVCIADEVQVGFGRVGSHYWA---FQTYNFIPDIVTMGKP-MGNGHPVAAVATTK--------EIA---- 297 (452)
T ss_pred HHHHHHhcCCCeEEeehhhhcccccchhhhh---hhhhccccchheeccc-CCCCCeeeEEeccH--------HHH----
Confidence 3566778899999999999998766655433 3333334446688999 77899999999987 333
Q ss_pred hhhHHhhh-----hhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhc-CCCcccccCCCccEEEEE
Q 047983 82 ISLNMRMD-----DYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKE-IPCITCPKKPEGSMFVMY 155 (233)
Q Consensus 82 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~g~~~~~ 155 (233)
+.+. .+++++.+|.+-+.+++-+ ..-.++.++...+.+.+....+...++. .+.+.. +.. -|.|+-
T Consensus 298 ----~Af~atgv~YFNTyGGnPVsCAv~laVm-~v~e~E~Lq~ha~~vG~~L~~lL~~~k~kh~~IGD-vRG-vGLFiG- 369 (452)
T KOG1403|consen 298 ----QAFHATGVEYFNTYGGNPVSCAVGLAVM-RVCEDENLQEHAQQVGEKLEVLLRRLKQKHECIGD-VRG-VGLFIG- 369 (452)
T ss_pred ----HHhccccceehhccCCCchhHHHHHHHH-HHHhhhhHHHHHHHHHHHHHHHHHHHhhhccceec-ccc-ceEEEe-
Confidence 3332 2233433333332333333 2234456666666777766666666655 322221 122 366665
Q ss_pred ecCCCccccccccccc--CCCCC--hH-HHHHHHHhccCEEEECCcccCC-CCcEEE--EeecCHHHHHHHHHHHHHHHH
Q 047983 156 CGSEDKCLLKLNYSLL--EGINS--DT-EFALKLAKEESIIVLPGITVGL-KDWLRI--TFAVEPSAFEIGLGRMKAFYY 227 (233)
Q Consensus 156 ~~~~~~~~~~~~~~~~--~~~~~--~~-~~~~~ll~~~gi~v~pg~~f~~-~~~~Rl--~~~~~~~~l~~~~~~l~~~l~ 227 (233)
+++-+- ....+ .. -.+.++-+.++|++..- |+ .+-+.+ .++.++++.++.+..|.++|.
T Consensus 370 ----------IdLVkD~~tRtP~tk~A~~~v~rlke~y~VLlsaD---GPh~NilKiKPPmCFneena~e~v~~ld~iLT 436 (452)
T KOG1403|consen 370 ----------IDLVKDRKTRTPDTKEAHWVVNRLKELYRVLLSAD---GPHRNILKIKPPMCFNEENADEFVLGLDEILT 436 (452)
T ss_pred ----------eeeecccccCCCcHHHHHHHHHHHHHhhhEEEecC---CCCCceeecCCCcccChhhHHHHHHHHHHHHH
Confidence 332211 11111 12 23444445667888642 22 455555 333366666776666666655
Q ss_pred H
Q 047983 228 R 228 (233)
Q Consensus 228 ~ 228 (233)
-
T Consensus 437 ~ 437 (452)
T KOG1403|consen 437 V 437 (452)
T ss_pred H
Confidence 3
No 364
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=97.09 E-value=0.016 Score=48.59 Aligned_cols=185 Identities=13% Similarity=0.109 Sum_probs=99.9
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccC-CccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFG-SIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++.++|++|++.|-.|-+=-.-.--. --.|+..+. ..|. | --.|||.+| .++|-++..+. +++
T Consensus 179 ~v~~lak~~glkLH~DGARi~NAava-sgV~vk~i~~~fDS-V-siCLSKglg---APVGSViVG~k-~FI--------- 242 (384)
T KOG1368|consen 179 RVKALAKRHGLKLHMDGARIFNAAVA-SGVPVKKICSAFDS-V-SICLSKGLG---APVGSVIVGSK-DFI--------- 242 (384)
T ss_pred HHHHHHhccCCeeecchhhhhhHHHH-cCCCHHHHHHhhhh-h-hhhhhccCC---CCcccEEEccH-HHH---------
Confidence 57889999999998886533211000 011222221 1121 1 226899764 45687655543 344
Q ss_pred hhhhHHhhhhhhh-hccCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecC
Q 047983 81 SISLNMRMDDYLL-LSESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGS 158 (233)
Q Consensus 81 ~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~ 158 (233)
.+.+.+.. ++.+.-... .+.+++.. -.+.+ ...+.-.++...+.+.++..+++..-.+..-..+..
T Consensus 243 -----~kA~~~RKalGGGmRQsGvLaaaaLva-l~~~~--~~L~~dHk~A~~lAe~~~~~~~i~v~v~a~etNiv~---- 310 (384)
T KOG1368|consen 243 -----DKARHFRKALGGGMRQSGVLAAAALVA-LDENV--PLLRADHKRAKELAEYINTPEEIRVEVPAVETNIVN---- 310 (384)
T ss_pred -----HHHHHHHHHhcCchhHHHHHHHHHHHH-hhcch--HHHHHHHHHHHHHHHHhccccceeeecchhhcceee----
Confidence 33333322 222222222 33333321 11111 144455667777778887776676533323344444
Q ss_pred CCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec--CHHHHHHHHHHH-HHHHHH
Q 047983 159 EDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV--EPSAFEIGLGRM-KAFYYR 228 (233)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~--~~~~l~~~~~~l-~~~l~~ 228 (233)
+.+..+ ++ +.+.+-+.++++||.+.+|.. ..+|+.+-. +.++++.....+ +.++..
T Consensus 311 -----~~l~q~---~~--~~~~l~~~~~k~gi~lm~~~s----~r~Rivlh~Qvt~~~ve~~~~~~~k~~~~q 369 (384)
T KOG1368|consen 311 -----MVLCQA---RL--TAEELCKFLEKNGILLMGGAS----RRIRIVLHHQVTDEDVEYVKSVLSKKFLKQ 369 (384)
T ss_pred -----eecccc---cC--CHHHHHHHHHHCCeEEeeccc----cceEEEEEEecCHHHHHHHHHHHHHHHHhh
Confidence 333323 22 555556667789999998753 568888875 899999999888 444443
No 365
>PLN02263 serine decarboxylase
Probab=96.86 E-value=0.079 Score=47.73 Aligned_cols=187 Identities=13% Similarity=-0.029 Sum_probs=107.0
Q ss_pred ChHHHHHHHcCc-----EEEEccccCccccCC-CccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCcccccc
Q 047983 1 FCIEETTKKLGI-----MVIADEVYGHLVFGN-THFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDL 74 (233)
Q Consensus 1 ~~i~~l~~~~~~-----~lI~De~y~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~ 74 (233)
++|.++|+++|+ |+-+|-+|+.+...- .....+. ...... =..-+..|. +..-..+|.+..++. .++.
T Consensus 248 ~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~~~~~~d-f~~~vD-SIsvD~HK~-l~~P~~cgvll~R~~--~~~~- 321 (470)
T PLN02263 248 DLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVKRAPKVT-FKKPIG-SVSVSGHKF-VGCPMPCGVQITRME--HINV- 321 (470)
T ss_pred HHHHHHHHHcCCccCCeeEEEeccchhhHhhhcccccccC-CCcCcc-EEEECCccc-cCCCcCEEEEEEehh--hHhh-
Confidence 478999999997 999999999876521 1111111 111111 224477897 788889999998862 2211
Q ss_pred chhhhhhhhhHHhhhhh-hhhccCcchH-HHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEE
Q 047983 75 GVAFFHSISLNMRMDDY-LLLSESVYTT-VGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMF 152 (233)
Q Consensus 75 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~ 152 (233)
+. .+. ..+... .++..+.+.. +..+...+...+.+-+++..+..-++.+++.+.|++. ++..+..|.....
T Consensus 322 -~~----~~~-~Yl~~~d~ti~gSR~g~~al~lW~~L~~~G~~G~~~~i~~~~~~A~~l~~~l~~~-g~~~~~~p~s~~V 394 (470)
T PLN02263 322 -LS----SNV-EYLASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNAHYLKDRLREA-GISAMLNELSSTV 394 (470)
T ss_pred -hc----cCh-HhhCCCCCCcCCCCCcHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEEeCCCceEE
Confidence 10 000 011100 1121122221 1333333444456677788888888899999999887 4444467776655
Q ss_pred EEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec--CHHHHHHHHHHHHHHHHHH
Q 047983 153 VMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV--EPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~--~~~~l~~~~~~l~~~l~~~ 229 (233)
++ ..+. +.. ..+|..+.+ ..+.+++++.. +.+.+++.++.|++.....
T Consensus 395 ~f------------~~p~------~~~------~~~gW~L~~-----~~~~~Hivvmphv~~~~id~fi~DL~~~~~~~ 444 (470)
T PLN02263 395 VF------------ERPK------DEE------FVRRWQLAC-----QGNIAHVVVMPSVTIEKLDYFLKELVEKRSTW 444 (470)
T ss_pred EE------------ecCc------hHH------hhcceEEcc-----CCCcEEEEEcCCCCHHHHHHHHHHHHHHHhhh
Confidence 54 2111 111 124555544 12568888876 6788888888887776643
No 366
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=96.81 E-value=0.0051 Score=53.56 Aligned_cols=116 Identities=18% Similarity=0.085 Sum_probs=71.9
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++++++|+++|+++|+|.+=+..+...+....+.+.+.+ +++.|=-|.++ |-|-|.+++.+ +++
T Consensus 177 ~~l~~ia~~~~lpvivD~aSg~~v~~e~~l~~~la~GaD---LV~~SgdKllg--GPqaGii~GkK--elI--------- 240 (395)
T COG1921 177 EELVEIAHEKGLPVIVDLASGALVDKEPDLREALALGAD---LVSFSGDKLLG--GPQAGIIVGKK--ELI--------- 240 (395)
T ss_pred HHHHHHHHHcCCCEEEecCCccccccccchhHHHhcCCC---EEEEecchhcC--CCccceEechH--HHH---------
Confidence 478999999999999999998876533344455545554 77889999876 55689999988 444
Q ss_pred hhhhHHhhhhh---hhhccCcchHH---HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhc
Q 047983 81 SISLNMRMDDY---LLLSESVYTTV---GAVPQILEKTEEEFFSKITDILREAADICCDRLKE 137 (233)
Q Consensus 81 ~~~~~~~~~~~---~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 137 (233)
.+++.. ..+.....+.+ +++..++......+.....+.+.+-.+.+.+....
T Consensus 241 -----~~lq~~~l~Ralrv~K~tla~l~~aLe~y~~~~~~~~~~~~~~~l~~~~~~l~~~~~~ 298 (395)
T COG1921 241 -----EKLQSHPLKRALRVDKETLAALEAALELYLQPEILGERLRTLRLLTQPAEALLAQAGR 298 (395)
T ss_pred -----HHHHhhhhhhhhhcCcHhHHHHHHHHHHHcCchhhhhhhHHHHhhccHHHHHHHHhhh
Confidence 333322 12344555554 44445443222344445555555555555555544
No 367
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=96.75 E-value=0.029 Score=48.91 Aligned_cols=192 Identities=15% Similarity=0.111 Sum_probs=96.3
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCE-EEEccCccccCC-CCceEEEEEecCCCccccccchhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPV-LTLGSISKRWIV-PGWRLGWLVTSDPNGILQDLGVAF 78 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~-i~~~s~sK~~~~-~G~R~G~~~~~~~~~~~~~~~~~~ 78 (233)
++|.++|++||++.|+.-+|+-=. ..-...+.......++ +++.|+-|.|.. .| |-++++..+..+
T Consensus 175 ~~IakiC~~~~IPhlvNnAYgvQ~--~~~~~~i~~a~~~GRvda~vqS~dkNF~VPvG---gai~As~~~~~i------- 242 (389)
T PF05889_consen 175 EEIAKICKEYDIPHLVNNAYGVQS--SKCMHLIQQAWRVGRVDAFVQSTDKNFMVPVG---GAIMASFDPSGI------- 242 (389)
T ss_dssp HHHHHHHHHHT--EEEEGTTTTT---HHHHHHHHHHHHHSTCSEEEEEHHHHHCEESS---HEEEEESSHHHH-------
T ss_pred HHHHHHHHHcCCceEEccchhhhH--HHHHHHHHHHHhcCCcceeeeecCCCEEecCC---CcEEEecCHHHH-------
Confidence 378999999999999999998711 0000011100011222 678899998754 34 444444432233
Q ss_pred hhhhhhHHhhhhhhhhccCcchHH---HHHHHHhhhcHH---HHHHHHHHHHHHHHHHHHHHhhc-CCCcccccCCCccE
Q 047983 79 FHSISLNMRMDDYLLLSESVYTTV---GAVPQILEKTEE---EFFSKITDILREAADICCDRLKE-IPCITCPKKPEGSM 151 (233)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~~~---~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~g~ 151 (233)
..+....--.++..+.. ..+..+=...+. ....+....+.++.+.+.+..++ + ...|..-.
T Consensus 243 -------~~vs~~YpGRas~sp~ld~~itLl~LG~~g~~~ll~~r~~~f~~l~erl~~~aee~~e~l-----l~~p~N~i 310 (389)
T PF05889_consen 243 -------LAVSKEYPGRASASPSLDLFITLLSLGCTGYGALLKERKASFPYLKERLKKWAEEVGERL-----LETPRNHI 310 (389)
T ss_dssp -------HHHHHTSHSHBTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEB-----SSSTT-SS
T ss_pred -------HHHHHHhhhhhhcccchHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh-----cCCCCCCe
Confidence 33333222222223332 222222111222 34445555666666666666554 2 23344444
Q ss_pred EEEEecCCCcccccccccccCCCC-ChHHHHHHHHhccCEE----EECCcccC-------CCCcEEEEee--cCHHHHHH
Q 047983 152 FVMYCGSEDKCLLKLNYSLLEGIN-SDTEFALKLAKEESII----VLPGITVG-------LKDWLRITFA--VEPSAFEI 217 (233)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ll~~~gi~----v~pg~~f~-------~~~~~Rl~~~--~~~~~l~~ 217 (233)
.+. +.++ .+..+. .+..++...|..+||. |.|+..+. +..|+-++-+ .+.++++.
T Consensus 311 s~a---------~tl~--~l~~~~~k~~~~lgs~Lf~R~VsG~RvV~~~~~~~tsh~~~yp~~Ylt~AsaiG~~~eevd~ 379 (389)
T PF05889_consen 311 SMA---------FTLD--TLYEISQKDGTFLGSMLFKRGVSGIRVVTPGGKKQTSHSSNYPCPYLTAASAIGMTREEVDY 379 (389)
T ss_dssp EEE---------EE-T--TCCTCCSSHHHHHHHHHHHTTEESSEEEETSSCEEETTSS--SSSEEEEEE-TT--HHHHHH
T ss_pred eEE---------EECc--cchhhccchhhhHHHHHHhCCcccceeeccCCCcccccCCCCchHHHHHHHHhCCCHHHHHH
Confidence 444 2232 221211 2567788888887664 44433332 2478877444 48999999
Q ss_pred HHHHHHHHHH
Q 047983 218 GLGRMKAFYY 227 (233)
Q Consensus 218 ~~~~l~~~l~ 227 (233)
.+++|.+.++
T Consensus 380 ~v~rL~k~i~ 389 (389)
T PF05889_consen 380 FVKRLDKIIK 389 (389)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhC
Confidence 9999999874
No 368
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=96.68 E-value=0.059 Score=47.03 Aligned_cols=185 Identities=12% Similarity=0.075 Sum_probs=96.2
Q ss_pred HcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhhhhhhHHhh
Q 047983 9 KLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHSISLNMRM 88 (233)
Q Consensus 9 ~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (233)
.+++++|+|-+=+-+ ..+..+. .+ -+.+.|.-|.+|.|| ++.++.++ +.+++. .+ ..-+. -.+
T Consensus 166 ~~~~llvvD~sS~~~----s~pid~~---~~--dvi~agsQKnlgP~G--ltvvivs~--~al~~~--~~-~~p~~-ldy 228 (364)
T PRK12462 166 LPDSPLIADMSSDFM----SRPFDVE---AY--GMVYAHAQKNLGPAG--VTVAIIRR--ALLERV--PD-TLPPM-LDF 228 (364)
T ss_pred cCCCeEEEEcCchhh----CCCCChH---Hc--cEEEeeccccCCCCc--eEEEEECH--HHHhhc--cc-cCCch-hhH
Confidence 457777777665542 1222222 22 377889999999998 45677766 333211 00 00000 111
Q ss_pred hhhhh--hccCcc-hHH-HHHHHHhhhcHHH--HHHHHHHHHHHHHHHHHHHhhcCCCcc-cccCCC--ccEEEEEecCC
Q 047983 89 DDYLL--LSESVY-TTV-GAVPQILEKTEEE--FFSKITDILREAADICCDRLKEIPCIT-CPKKPE--GSMFVMYCGSE 159 (233)
Q Consensus 89 ~~~~~--~~~~~~-~~~-~~~~~~l~~~~~~--~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~~--~g~~~~~~~~~ 159 (233)
+.+.. ...+++ ... .++...++--.++ =++.+.++-+++.+.+++.+++.+++. ....++ +-+-+.
T Consensus 229 ~~~~~~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~id~~~~~~~~~~~~~~RS~mnv~----- 303 (364)
T PRK12462 229 RTHVEHRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYATLDALNEVIDCHAHRAARSTMNVA----- 303 (364)
T ss_pred HHHHhcCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcCcceEE-----
Confidence 11111 111122 222 3333332211112 356778888899999999998875332 112222 233333
Q ss_pred CcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec--CHHHHHHHHHHHHHHHH
Q 047983 160 DKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV--EPSAFEIGLGRMKAFYY 227 (233)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~--~~~~l~~~~~~l~~~l~ 227 (233)
++++.+ +-.+...+.++++|+.-..|..- .+.+|.|+-. +.+.++.+.+-++++-+
T Consensus 304 ----f~~~~~------~l~~~f~~~a~~~gl~~lkGhr~--vgg~Ras~yna~~~e~v~~L~~fm~~f~~ 361 (364)
T PRK12462 304 ----FRFRQP------RLDTLFKEQSTEAGFCGLSGHRS--IGGIRASLYNAVSEQAVSRLCAFLKDFAI 361 (364)
T ss_pred ----EEcCCH------HHHHHHHHHHHHCCCccccCCcc--cCceEEEcCCCCCHHHHHHHHHHHHHHHH
Confidence 223221 13455566677889998876643 4679999986 66665555555554443
No 369
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=96.60 E-value=0.14 Score=50.39 Aligned_cols=189 Identities=13% Similarity=0.078 Sum_probs=100.0
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCcccc---CCCCceEEEEEecCCCccccccc--h
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRW---IVPGWRLGWLVTSDPNGILQDLG--V 76 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~---~~~G~R~G~~~~~~~~~~~~~~~--~ 76 (233)
+|.++|+++|+++++ -+... .... ..+...++.+ |++++--|.. |..|-+.|++.+++ ++.+.+. +
T Consensus 254 ~I~~~ah~~GaL~iV-aad~l-al~~--l~~pge~GAD---i~vgsgqKwg~P~G~GGP~aGflavr~--~~~r~~Pgri 324 (993)
T PLN02414 254 EFVKNAHANGVKVVM-ATDLL-ALTM--LKPPGEWGAD---IVVGSAQRFGVPMGYGGPHAAFLATSQ--EYKRLMPGRI 324 (993)
T ss_pred HHHHHHHHcCCEEEE-EECHH-HhcC--CCCHhhccCc---EEEECCCccccCCCCCCCCeeEEEECH--HHHhhCCCcc
Confidence 789999999999998 22211 1111 1123334443 7778877763 12344599999987 4444332 1
Q ss_pred hhhhh-hhhHHhh------h-hhh---hhccCcchH-H--HHHHHH-hhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCc
Q 047983 77 AFFHS-ISLNMRM------D-DYL---LLSESVYTT-V--GAVPQI-LEKTEEEFFSKITDILREAADICCDRLKEIPCI 141 (233)
Q Consensus 77 ~~~~~-~~~~~~~------~-~~~---~~~~~~~~~-~--~~~~~~-l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 141 (233)
+-.+. ..+...+ + +.. ..+++..+. + ++++.+ +......=+++.++++.++..++.+.|+.. ++
T Consensus 325 VG~s~d~~g~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L~~~-G~ 403 (993)
T PLN02414 325 IGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAGLKKL-GF 403 (993)
T ss_pred cCcccCCCCCcccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhhc-CC
Confidence 10000 0000000 0 001 111122111 1 333322 111122336677788899999999999775 44
Q ss_pred ccccCCCccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec--CHHHHHHHH
Q 047983 142 TCPKKPEGSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV--EPSAFEIGL 219 (233)
Q Consensus 142 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~--~~~~l~~~~ 219 (233)
....+|..+ . +.+..+ +. +.+.+.|.++||.+..-. ++.+|+|+.. ++++++.++
T Consensus 404 ~~~~~~~f~---~---------vt~~~~------~~-~~v~~~L~~~gI~l~~~~----~~~lrvs~~e~~T~edId~L~ 460 (993)
T PLN02414 404 QVQSLPFFD---T---------VKVKCS------DA-DAIADAAAKVGINLRVVD----ANTVTVSFDETTTLEDVDKLF 460 (993)
T ss_pred ccCCCCCcC---e---------EEEecC------CH-HHHHHHHHHCCCeeEEec----CCeEEEEeeccCCHHHHHHHH
Confidence 432222222 2 223322 24 555666778899775421 4679999985 788888888
Q ss_pred HHHH
Q 047983 220 GRMK 223 (233)
Q Consensus 220 ~~l~ 223 (233)
+.|.
T Consensus 461 ~~l~ 464 (993)
T PLN02414 461 KVFA 464 (993)
T ss_pred HHHc
Confidence 8885
No 370
>PLN03032 serine decarboxylase; Provisional
Probab=96.46 E-value=0.11 Score=45.67 Aligned_cols=181 Identities=13% Similarity=-0.007 Sum_probs=96.0
Q ss_pred ChHHHHHHHcC-----cEEEEccccCccccCC-CccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCcccccc
Q 047983 1 FCIEETTKKLG-----IMVIADEVYGHLVFGN-THFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDL 74 (233)
Q Consensus 1 ~~i~~l~~~~~-----~~lI~De~y~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~ 74 (233)
++|.++|+++| +++.+|-+|+.+...= .....+. ... .---...|..|. +..-.-+|.+..++ ..++.
T Consensus 181 ~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~-~~~-~vDSis~s~HK~-~g~P~g~G~ll~r~--~~~~~- 254 (374)
T PLN03032 181 DRILRILKELGYTEDRFYIHCDGALFGLMMPFVSRAPEVT-FRK-PIGSVSVSGHKF-LGCPMPCGVALTRK--KHVKA- 254 (374)
T ss_pred HHHHHHHHHhCCCCCCeeEEEEccchhhhhhccCCCcccC-CCc-CCcEEEECcccc-cCCCcCeEEEEEEc--hhhHh-
Confidence 47999999996 5899999998743220 0001111 111 112446688997 55556689998887 33321
Q ss_pred chhhhhhhhhHHhhhh-hhhhccCcchH-HHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEE
Q 047983 75 GVAFFHSISLNMRMDD-YLLLSESVYTT-VGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMF 152 (233)
Q Consensus 75 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~ 152 (233)
+.. +. ..+.. -.++..+.+.. +..+...+...+.+-..++.+..-++.+++.+.|++. ++..+..|.....
T Consensus 255 -~~~-~~----~Yl~~~d~ti~gSR~g~~~l~~w~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~-~~~~~~~p~~~~V 327 (374)
T PLN03032 255 -LSQ-NV----EYLNSRDATIMGSRNGHAPLYLWYTLRRKGYRGIKRDVQHCMRNAHYLKDRLTEA-GLTCRLNELSSTV 327 (374)
T ss_pred -hcc-CC----cccCCCCCcccCCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC-CCcEEECCCceEE
Confidence 100 00 00000 01122222211 1223333434455667778888888899999999886 4444466765554
Q ss_pred EEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec--CHHHHHHHHHHHH
Q 047983 153 VMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV--EPSAFEIGLGRMK 223 (233)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~--~~~~l~~~~~~l~ 223 (233)
++ ..+. +.. +. +|..+.+ ..+++|+++.. +.+.+++.+.-|+
T Consensus 328 ~f------------~~~~------~~~-----~~-~~w~l~~-----~~~~~hi~vm~~~~~~~id~fi~dl~ 371 (374)
T PLN03032 328 VF------------ERPM------DEA-----FI-KKWQLAC-----EGDIAHVVVMPNVTVEKLDEFVEELV 371 (374)
T ss_pred EE------------cCCC------cHh-----Hh-heeeecc-----cCCEEEEEECCCCCHHHHHHHHHHHh
Confidence 44 2111 111 11 2444443 12588898875 5566666666554
No 371
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=96.43 E-value=0.6 Score=45.62 Aligned_cols=208 Identities=13% Similarity=-0.029 Sum_probs=106.2
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccC----CCCceEEEEEecCCCccccccchh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWI----VPGWRLGWLVTSDPNGILQDLGVA 77 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~----~~G~R~G~~~~~~~~~~~~~~~~~ 77 (233)
+|.++|+++|.++++|-++..-.. ...+...++.+ ++..|..|+|+ ..|--+|.+.+.. .+...|.-.
T Consensus 649 eI~~iah~~G~~v~VDgAq~~al~---~l~~Pg~~GaD---i~~~s~HKtf~~P~G~GGPg~G~i~vr~--~L~~~lPg~ 720 (939)
T TIGR00461 649 HACDIVHSFGGQVYLDGANMNAQV---GLTSPGDLGAD---VCHLNLHKTFCIPHGGGGPGMGPIGVKS--HLIPFLPKH 720 (939)
T ss_pred HHHHHHHHcCCEEEEEecChhhCC---CCCCccccCCC---EEEecCCccCCCCCCCCCCCeEEEEEhh--hchhhcCCC
Confidence 689999999999999999854111 11112223333 77888899554 2344489999986 333221100
Q ss_pred hh-hhhhhHHhhhhhhhhcc-CcchHHHHH--HHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEE
Q 047983 78 FF-HSISLNMRMDDYLLLSE-SVYTTVGAV--PQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFV 153 (233)
Q Consensus 78 ~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~ 153 (233)
.. .......+-++....+. ...+...++ ..++...+.+=+++..+.--.+.+++.+.|++...+ ..+...+.++
T Consensus 721 ~v~~t~d~~greq~Iga~s~~~~g~a~~~l~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~~~~~--l~~~~~~~~~ 798 (939)
T TIGR00461 721 DVVSMITGIGGSKSIGSVSAAPYGSASILPISWMYIKMMGNEGLPKASVVAILNANYMATRLKDHYPI--LFVGTLKHVA 798 (939)
T ss_pred cccccccCCCCccccccccccccCcHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhccCcc--cccCCCCcee
Confidence 00 00000000000001111 112211222 222222345567777888888999999999773222 1222223311
Q ss_pred EEecCCCccccccccccc---CCCCChHHHHHHHHhccCEEEECCcccCCCC--cEEEEeecCHHHHHHHHHHHHHHHHH
Q 047983 154 MYCGSEDKCLLKLNYSLL---EGINSDTEFALKLAKEESIIVLPGITVGLKD--WLRITFAVEPSAFEIGLGRMKAFYYR 228 (233)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~--~~Rl~~~~~~~~l~~~~~~l~~~l~~ 228 (233)
- + +.++.+.. -++ ....+.+.|.+.|+.... ..|...+ .+|.+-..+.++++..++.+.++-++
T Consensus 799 h----E----fv~~~~~~~~~~g~--~~~dIakrL~d~G~hapt-~~~pv~g~lmiepTE~eskeelD~f~~al~~I~~e 867 (939)
T TIGR00461 799 H----E----CILDLRPLKAKTGI--EAIDVAKRLQDYGFHAPT-LSFPVPGTLMVEPTESESLEELDRFCDAMIAIKEE 867 (939)
T ss_pred E----E----EEEeccchhhhcCC--CHHHHHHHHHhCCeeccc-cCCccCCeEEEEeeccCCHHHHHHHHHHHHHHHHH
Confidence 1 0 11222210 122 445555556677998543 3344333 35555555888889888888777666
Q ss_pred Hh
Q 047983 229 HA 230 (233)
Q Consensus 229 ~~ 230 (233)
..
T Consensus 868 ~~ 869 (939)
T TIGR00461 868 IN 869 (939)
T ss_pred HH
Confidence 54
No 372
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=96.32 E-value=0.058 Score=47.34 Aligned_cols=148 Identities=16% Similarity=0.100 Sum_probs=79.3
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccc-cccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFV-PMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~-~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|+++|+++|+|+-+|-+|+...+-.+... -...+..-+ =..-+..|. +..-..+|++..++...+.+. +. .
T Consensus 214 ~~i~~i~~~~~~wlHVDaA~gg~~~~~~~~~~~~~gi~~ad--Sit~d~HK~-l~~P~~~~~~l~r~~~~l~~~--~~-~ 287 (373)
T PF00282_consen 214 EEIADICEKYNIWLHVDAAYGGSALLSPEYRHLLFGIERAD--SITIDPHKW-LGVPYGCGVLLVRDKSDLRDA--FS-I 287 (373)
T ss_dssp HHHHHHHHHCT-EEEEEETTGGGGGGHCTTGGGGTTGGGES--EEEEETTTT-TS-SSS-EEEEESSGGGHHGG--GE-E
T ss_pred HHHhhhccccceeeeeccccccccccccccccccccccccc--ccccchhhh-hcCCccceeEEeecccchHHH--hc-c
Confidence 3799999999999999999998332111111 122222111 224478998 667779999999885222211 10 0
Q ss_pred hhhhhHHh------hhhhhhhccCcchHHHHHH--HHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccE
Q 047983 80 HSISLNMR------MDDYLLLSESVYTTVGAVP--QILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSM 151 (233)
Q Consensus 80 ~~~~~~~~------~~~~~~~~~~~~~~~~~~~--~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~ 151 (233)
+..-+.+. ...+...+...+-...++. ..++..+.+-+++..+..-+..+++.+.|++.+.+....+|+-+.
T Consensus 288 ~~~Yl~~~~~~~~~~~~~~~~tl~~SR~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~~~~~~~ 367 (373)
T PF00282_consen 288 NADYLGNDDRESDESYDYGDYTLQGSRRFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELVNEPDLNI 367 (373)
T ss_dssp EETCTT-S-SSS-GGGCEEEGSSSSSGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSTTSSSE
T ss_pred ChhhhcccccccccccccccccccccccchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEcCCCceE
Confidence 00000000 0001111111111112232 223334567778888888899999999999987777655666555
Q ss_pred EEE
Q 047983 152 FVM 154 (233)
Q Consensus 152 ~~~ 154 (233)
.+|
T Consensus 368 vcF 370 (373)
T PF00282_consen 368 VCF 370 (373)
T ss_dssp EEE
T ss_pred EEE
Confidence 544
No 373
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=96.02 E-value=0.6 Score=39.96 Aligned_cols=204 Identities=13% Similarity=0.031 Sum_probs=106.6
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCcccc-CCCCceEEEEEecCCCccccccchhh--
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRW-IVPGWRLGWLVTSDPNGILQDLGVAF-- 78 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~R~G~~~~~~~~~~~~~~~~~~-- 78 (233)
+|-+++.+|+++++.|-+|+--. -+..+-..+. -+-|++--|.+ +.||-.-|-.+.+++.+...+ .+.-
T Consensus 187 aiT~~AH~~galv~wDLAHsaGa----vp~~Lh~~ga---DfaigcsyKYLNgGPGapa~l~v~~~h~e~~~~-~lsgW~ 258 (407)
T COG3844 187 AITALAHQHGALVGWDLAHSAGA----VPVDLHAAGA---DFAIGCSYKYLNGGPGAPAGLFVAPRHRERSWP-PLSGWW 258 (407)
T ss_pred HHHHHHHhcCceEEeehhcccCC----cceeecccCC---CeeeeeeceeccCCCCCceeEEecccccccccc-cccccc
Confidence 46789999999999999999732 2233333333 27788888866 568877777776664222211 1100
Q ss_pred hhhhhhH--Hhhh---hhhhh-ccCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhc-CC--CcccccCCC
Q 047983 79 FHSISLN--MRMD---DYLLL-SESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKE-IP--CITCPKKPE 148 (233)
Q Consensus 79 ~~~~~~~--~~~~---~~~~~-~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~--~~~~~~~~~ 148 (233)
-|..-+. ..+. ....+ +.+++... +++..-|..-.+--+.++|+.--.-.+++.+.++. .+ ++.. ..|.
T Consensus 259 gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~aLDifa~~~i~~lR~kSlaLTd~fieLvEa~~~~~~l~l-~tPr 337 (407)
T COG3844 259 GHARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGALDIFADVDITELRKKSLALTDYFIELVEARCEYYGLTL-VTPR 337 (407)
T ss_pred CCCCcchhhhccCcCccccceeeCCcchhhhHHHhhhhhhhhhcCHHHHHHhhhHHHHHHHHHHHhccccCCcEE-eccc
Confidence 0000000 0000 00011 11111111 22222221111222455555555555666666655 22 2221 2222
Q ss_pred ccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec---CHHHHHHHHHHHHHH
Q 047983 149 GSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV---EPSAFEIGLGRMKAF 225 (233)
Q Consensus 149 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~---~~~~l~~~~~~l~~~ 225 (233)
.. -.-++++.+-. +....+.+.|-++||+. .|-..+-+|+.+++ +-+++-.+.+.|+++
T Consensus 338 ~~-------~~rGsqvS~~h-------p~~~~V~qaLi~rGVig----D~R~P~vlRfgftPlY~~~~DVw~AV~~L~ev 399 (407)
T COG3844 338 AH-------EERGSQVSLYH-------PHGYQVMQALIDRGVIG----DFREPDVLRFGFTPLYVSFVDVWDAVDALEEV 399 (407)
T ss_pred hh-------hhccceeeEec-------CcHHHHHHHHHHcCccc----cccCCCeeeecCccceechhHHHHHHHHHHHH
Confidence 10 00001111222 25677778888999984 44556899999986 678889999999999
Q ss_pred HHHHhhc
Q 047983 226 YYRHAKK 232 (233)
Q Consensus 226 l~~~~~~ 232 (233)
+++.+.+
T Consensus 400 L~t~a~~ 406 (407)
T COG3844 400 LDTLAWQ 406 (407)
T ss_pred HHhhccC
Confidence 9887654
No 374
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=95.97 E-value=0.29 Score=47.73 Aligned_cols=90 Identities=14% Similarity=0.025 Sum_probs=61.3
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEE
Q 047983 112 TEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESII 191 (233)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~ 191 (233)
.+.+=++++.++...+..++.+.|++. ++.. ..+ .+|-. +.+.++. .+.+.+.+.+.++||.
T Consensus 335 ~G~~GL~~iA~~~~~~a~~l~~~L~~~-G~~~-~~~--~fF~~---------~~v~~~~-----~~~~~i~~~~~~~gi~ 396 (939)
T TIGR00461 335 HGPKGLKNIARRIHSLTSILANGLEND-PHEL-INK--TWFDT---------LTVKVGN-----GISSELLKAAEEFNIN 396 (939)
T ss_pred HCHHHHHHHHHHHHHHHHHHHHHHHhC-CCcc-cCC--Cccce---------EEEEeCC-----CCHHHHHHHHHHCCCe
Confidence 345668888899999999999999885 5543 222 44444 4444321 1455566667788999
Q ss_pred EECCcccCCCCcEEEEeec--CHHHHHHHHHHHH
Q 047983 192 VLPGITVGLKDWLRITFAV--EPSAFEIGLGRMK 223 (233)
Q Consensus 192 v~pg~~f~~~~~~Rl~~~~--~~~~l~~~~~~l~ 223 (233)
+... .++.+++|+.. +.++++..++.+.
T Consensus 397 l~~~----~~~~i~~s~~E~~t~~di~~l~~~~~ 426 (939)
T TIGR00461 397 LRAV----DTTTVGIALDETTTKADVENLLKVFD 426 (939)
T ss_pred eeec----CCCEEEEEeecCCCHHHHHHHHHHhc
Confidence 7652 24688999985 7888888888774
No 375
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=95.92 E-value=0.32 Score=43.51 Aligned_cols=188 Identities=17% Similarity=0.164 Sum_probs=105.9
Q ss_pred hHHHHHHHcCcEEEEccc------cC----ccccCCCcccccccc-----CCccCEEEEccCccccCCC-CceEEEEEec
Q 047983 2 CIEETTKKLGIMVIADEV------YG----HLVFGNTHFVPMGVF-----GSIVPVLTLGSISKRWIVP-GWRLGWLVTS 65 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~------y~----~~~~~~~~~~~~~~~-----~~~~~~i~~~s~sK~~~~~-G~R~G~~~~~ 65 (233)
++.++|++||+.++.|=+ |. +-.+.+. ++..+ ..-| -+..|+||.++.| | |+++++
T Consensus 208 ~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~---si~eI~rE~~~~aD--svt~slsKglgApvG---g~Lag~ 279 (467)
T TIGR02617 208 AVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNW---SIEQITRETYKYAD--MLAMSAKKDAMVPMG---GLLCFK 279 (467)
T ss_pred HHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCC---CHHHHHHHhhccCC--EEEEEcCCCCCCccc---ceEEec
Confidence 678999999999999853 31 1112222 22222 1112 4466999998777 6 777777
Q ss_pred CCC--ccccccchhhhhhhhhHHhhhhh----hh-hccCcchH-H-HHHHHHhhhc-HHHHHHHHHHHHHHHHHHHHHHh
Q 047983 66 DPN--GILQDLGVAFFHSISLNMRMDDY----LL-LSESVYTT-V-GAVPQILEKT-EEEFFSKITDILREAADICCDRL 135 (233)
Q Consensus 66 ~~~--~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~-~-~~~~~~l~~~-~~~~~~~~~~~~~~~~~~l~~~L 135 (233)
+++ +++ .+++.. -. .+-+..+. . .+++.-|.+. ..+++..... ..++|.+.|
T Consensus 280 d~~~~~l~--------------~~~~~~~i~~EGf~tYGGlagrd~ea~a~Gl~e~~~~~yl~~ri~----qv~yl~~~L 341 (467)
T TIGR02617 280 DDSFFDVY--------------TECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMNLDWLAYRIN----QVQYLVNGL 341 (467)
T ss_pred chhHHHHH--------------HHHHhhcccccCCcCcCchhHHHHHHHHhhhhhcccHHHHHHHHH----HHHHHHHHH
Confidence 731 222 222221 01 11122222 2 5555444333 3345444443 345677777
Q ss_pred hcCCCcccccCCCccEEEEEecCCCccccccccccc-CCC----CChHHHHHHHHhccCEEEECCcccC-----------
Q 047983 136 KEIPCITCPKKPEGSMFVMYCGSEDKCLLKLNYSLL-EGI----NSDTEFALKLAKEESIIVLPGITVG----------- 199 (233)
Q Consensus 136 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~ll~~~gi~v~pg~~f~----------- 199 (233)
.+. ++.. .. .||--++ ++...+ +.+ -+...++..+..+.||.-.--..+.
T Consensus 342 ~~~-Gvpi-~~-~Gghav~-----------iDa~~~lphip~~~fpa~al~~~ly~~~GiR~~e~G~~~~~rd~~~~~~~ 407 (467)
T TIGR02617 342 EEI-GVVC-QQ-AGGHAAF-----------VDAGKLLPHIPADQFPAHALACELYKVAGIRAVEIGSLLLGRDPKTGKQL 407 (467)
T ss_pred HhC-CCcE-Ee-cCccEEE-----------EehhhhCCCCChhhCcHHHHHHHHHHHcCcceEeecceecccCCCCCccC
Confidence 775 5543 34 5666665 322221 111 1366788888889999866533331
Q ss_pred -C-CCcEEEEeec---CHHHHHHHHHHHHHHHHHH
Q 047983 200 -L-KDWLRITFAV---EPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 200 -~-~~~~Rl~~~~---~~~~l~~~~~~l~~~l~~~ 229 (233)
+ -..+|+++.- +.+.++-+.+.+..+.++-
T Consensus 408 ~~~~el~RlaipRrvyt~~h~d~v~~~~~~~~~~~ 442 (467)
T TIGR02617 408 PCPAELLRLTIPRATYTQTHMDFIIEAFKHVKENA 442 (467)
T ss_pred CCccceeeeccccccccHhHHHHHHHHHHHHHhhh
Confidence 0 1579999983 7888999999988877654
No 376
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=95.65 E-value=1.2 Score=39.67 Aligned_cols=205 Identities=12% Similarity=0.057 Sum_probs=112.7
Q ss_pred ChHHHHHHH-cCcEEEEccccCccccC-CCccccccccCCccC-EEEEccCc-cccCCCCceEEEEEecCCCccccccch
Q 047983 1 FCIEETTKK-LGIMVIADEVYGHLVFG-NTHFVPMGVFGSIVP-VLTLGSIS-KRWIVPGWRLGWLVTSDPNGILQDLGV 76 (233)
Q Consensus 1 ~~i~~l~~~-~~~~lI~De~y~~~~~~-~~~~~~~~~~~~~~~-~i~~~s~s-K~~~~~G~R~G~~~~~~~~~~~~~~~~ 76 (233)
|+|.++..+ +++++-+|-+-+.|+-. +.. ....++-.++ |-.+..-+ | ||+.=--++|++-.+.+.+-.++-+
T Consensus 238 e~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~--~~~~fdFr~p~V~Sisa~~HK-YGl~~~G~~~vl~r~k~~~~~q~~~ 314 (491)
T KOG1383|consen 238 EKLADLLLEIWDIPIHVDACLGGFINPAGYL--NEEEFDFRVPGVTSISADGHK-YGLAPAGSSWVLYRNKELLPHQLFF 314 (491)
T ss_pred HHHHHHHHHHhCCceeecccCcccccccccc--CccccccCCCCceeEeeccce-eeeeecCcEEEEEcccccccceEEE
Confidence 467788888 99999999999999864 111 1111222222 22222222 3 3554444799998886434332111
Q ss_pred hhhhhhhhHHhhhhhhhh-ccCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEE
Q 047983 77 AFFHSISLNMRMDDYLLL-SESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVM 154 (233)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~ 154 (233)
. .. -...+....++ .+-+.++. ++.++++.-+.+.+.+ ..+.+.++...+.+.+++++++..+.+|.=++-+|
T Consensus 315 ~---~~-w~Gg~y~s~TlngSR~g~~va~~wa~~~~lG~eGY~~-~~~~ive~~~~l~egie~i~~i~i~gkp~vs~~~~ 389 (491)
T KOG1383|consen 315 H---TD-WLGGIYASPTLNGSRPGSQVAAQWAALMSLGEEGYRE-NTQNIVETARKLREGIENIKGIKIVGKPLVSFILF 389 (491)
T ss_pred e---cc-ccCccccCcccccCCcccHHHHHHHHHHHhhHHHHHH-HHHHHHHHHHHHHHhhhccccceecCCCcEEEEEc
Confidence 1 00 00111111111 12233333 5566665434444444 44457788888999998877766555565454444
Q ss_pred EecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec-CHHHHHHHHHHHHHHHHHHhh
Q 047983 155 YCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV-EPSAFEIGLGRMKAFYYRHAK 231 (233)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~-~~~~l~~~~~~l~~~l~~~~~ 231 (233)
+-+. . +.-.+-.+|.+.|-.+. +--|....++-++... .++--+..+.-|++++++..+
T Consensus 390 ------------~s~~---~--~i~elsd~l~~~GW~ln-alq~P~a~Hi~vt~~~~~~~~A~~~v~Di~~~~~el~~ 449 (491)
T KOG1383|consen 390 ------------GSND---V--NIFELSDLLRKKGWILN-ALQFPAAIHICVTRVHAREDVADRFVADIRKVVEELKS 449 (491)
T ss_pred ------------cCCc---c--chhhhhHHHHhcCcCcc-ccCCCCceEEEEEeeeccHHHHHHHHHHHHHHHHHHHh
Confidence 2211 1 45556677888887664 4556655555555555 455456677778888777653
No 377
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=94.86 E-value=0.066 Score=46.30 Aligned_cols=58 Identities=22% Similarity=0.327 Sum_probs=38.0
Q ss_pred hHHHHHHH--cCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCC----CCceEEEEEecCCCccc
Q 047983 2 CIEETTKK--LGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIV----PGWRLGWLVTSDPNGIL 71 (233)
Q Consensus 2 ~i~~l~~~--~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~----~G~R~G~~~~~~~~~~~ 71 (233)
++++++++ .++++++|.+|++|+-.. + ...++.+ +..+|+-|.-|. +| ||++++. +++
T Consensus 179 ~~i~~vk~~~p~~iifVDNCYGEFvE~~-E---P~~vGAD---l~aGSLIKNpGGgiAptG---GYIaGr~--~lV 242 (403)
T PF06838_consen 179 EIIKFVKEINPDVIIFVDNCYGEFVETQ-E---PTEVGAD---LMAGSLIKNPGGGIAPTG---GYIAGRK--DLV 242 (403)
T ss_dssp HHHHHHHHH-TTSEEEEE-TTTTTTSSS-----GGGGT-S---EEEEETTSGGGTTT-SS----EEEEESH--HHH
T ss_pred HHHHHHHhhCCCeEEEEeCCcceecccc-C---ccccchh---heeccceeCCCCCccCcC---CEEechH--HHH
Confidence 34444554 499999999999997332 2 2234454 889999997543 56 9999987 455
No 378
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=94.82 E-value=2.6 Score=37.71 Aligned_cols=53 Identities=13% Similarity=0.050 Sum_probs=41.5
Q ss_pred ChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec---CHHHHHHHHHHHHHHHHHH
Q 047983 176 SDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV---EPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 176 ~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~---~~~~l~~~~~~l~~~l~~~ 229 (233)
.+..++.++-....|.+.|.+ +.+.-.+|++++. +.++++++-+.|.+.....
T Consensus 417 ~ne~Ll~~in~~g~i~l~~~~-l~gk~vlRf~V~s~~t~~~di~~a~~~I~~~a~~l 472 (511)
T KOG0628|consen 417 INEALLNRLNSSGRIHLVPAS-LHGKFVLRFAVCSPLTNESDIDEAWKIIFEAADEL 472 (511)
T ss_pred HHHHHHHHHHhcCcEEEEEee-ecceEEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Confidence 377888888888899999854 3334569999985 6888999998888877663
No 379
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=94.33 E-value=0.12 Score=44.75 Aligned_cols=119 Identities=20% Similarity=0.128 Sum_probs=43.0
Q ss_pred ChHHHHHHHcCcEEEEccccCcccc---CC-CccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccch
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVF---GN-THFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGV 76 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~---~~-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~ 76 (233)
+++++++++||+++|+|-.=+.+.. .+ +...++...-...--+++.|=.|.+|.|. .|.+++.. +++
T Consensus 160 ~el~~la~~~~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~~~GaDlV~fSGdKlLGGPQ--aGiI~Gkk--~lI----- 230 (367)
T PF03841_consen 160 EELAELAKEHGLPVIVDLGSGLLVDLSPYGLPDEPTVQEYLAAGADLVTFSGDKLLGGPQ--AGIIVGKK--ELI----- 230 (367)
T ss_dssp -HHHHHHHHHT--EEEE-TTHHHHHHHTT----------CCCCT-SEEEEETTSSSSS-S---EEEEEEH--HHH-----
T ss_pred HHHHHHHhhcCCcEEEECCCCCCcCcccccCccccHHHHHhhcCCCEEEEECCCcCCCCC--eEEEEeCH--HHH-----
Confidence 5799999999999999987743321 11 11122332222223377888899887666 79999998 444
Q ss_pred hhhhhhhhHHhhhhhhh---hccCcchHH---HHHHHHhhhc-------HHHHHHHHHHHHHHHHHHHHHHhhc
Q 047983 77 AFFHSISLNMRMDDYLL---LSESVYTTV---GAVPQILEKT-------EEEFFSKITDILREAADICCDRLKE 137 (233)
Q Consensus 77 ~~~~~~~~~~~~~~~~~---~~~~~~~~~---~~~~~~l~~~-------~~~~~~~~~~~~~~~~~~l~~~L~~ 137 (233)
.+++..-- +...-.+.+ +++..++... -...+....+.++++.+.+...|+.
T Consensus 231 ---------~~lk~~pl~RalrvdK~tla~L~atL~~Y~~~~~~~~~ip~l~ml~~~~~~L~~rA~~l~~~l~~ 295 (367)
T PF03841_consen 231 ---------EKLKKHPLGRALRVDKLTLAALEATLRLYLDPDKAKEEIPTLRMLTQSLEELRARAERLAAQLKA 295 (367)
T ss_dssp ---------HHHHHHHHTTT-B--HHHHHHHHHHHHH-------------------------------------
T ss_pred ---------HHHhhCCCcceEeeCHHHHHHHHHHHHHHHHhhcccccccccccccccccccccccccccccccc
Confidence 33332211 222223332 3333333211 1134556667777788888777766
No 380
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=93.56 E-value=3.2 Score=35.99 Aligned_cols=162 Identities=16% Similarity=0.035 Sum_probs=86.1
Q ss_pred EEEEccCccccCCCCceEEEEEecCCCccccccchhhhhhhhhHHhhhhh--hhhccCcchHH--HH---HHHHhhhcHH
Q 047983 42 VLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHSISLNMRMDDY--LLLSESVYTTV--GA---VPQILEKTEE 114 (233)
Q Consensus 42 ~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~--~~---~~~~l~~~~~ 114 (233)
-++..|--|.+|..| ++-++.++ +++.+.+-...-++ -++... .....++++.. +. .-.+++..+
T Consensus 192 dviyagaQKnlGpaG--ltvvIvr~--~~l~r~~~~~~P~i---f~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~G- 263 (365)
T COG1932 192 DVIYAGAQKNLGPAG--LTVVIVRP--DLLERAESYTLPSI---FDYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQG- 263 (365)
T ss_pred ceEEEehhhccCccc--eEEEEEcH--HHHhcccccCCchH---hhchhhhccCCccCCcHHHHHHHHHHHHHHHHHcC-
Confidence 367788999999999 88888887 45432110000000 011111 11122333332 11 111222221
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCC--ccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEE
Q 047983 115 EFFSKITDILREAADICCDRLKEIPCITCPKKPE--GSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIV 192 (233)
Q Consensus 115 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v 192 (233)
=++.+.++-+++.+.|.+.+++-+.......++ +-+-+. +++....+ +..++.. ++++|+..
T Consensus 264 -Gl~~~~~rn~~ka~~LY~~id~s~fy~~~v~~~~RS~mnV~---------f~~~~~~l-----d~~fv~e-ae~~gl~~ 327 (365)
T COG1932 264 -GLEALEARNQAKAQLLYDWIDKSDFYRNLVAKANRSRMNVT---------FTLVDAEL-----DKGFVAE-AEAAGLIY 327 (365)
T ss_pred -CHHHHHHHHHHHHHHHHHHHHhCCccccccchhhccceeEE---------EEcCcHHH-----HHHHHHH-HHHcCCce
Confidence 235566777888899999987753222222222 234444 33332211 4455555 44567777
Q ss_pred ECCcccCCCCcEEEEeec--CHHHHHHHHHHHHHHHHHH
Q 047983 193 LPGITVGLKDWLRITFAV--EPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 193 ~pg~~f~~~~~~Rl~~~~--~~~~l~~~~~~l~~~l~~~ 229 (233)
.-|+. ..+.+|+++.. +.++++.+++-|..+.+++
T Consensus 328 lkGhr--~vgGmRasiynA~~~e~veaL~~fm~~f~~~~ 364 (365)
T COG1932 328 LKGHR--SVGGLRASIYNAVPLEDVEALTDFMDWFEETY 364 (365)
T ss_pred ecccc--CCCceeeeeecCCCHHHHHHHHHHHHHHHHhh
Confidence 76643 23559999996 7888888877777776654
No 381
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=91.97 E-value=1.4 Score=38.98 Aligned_cols=208 Identities=14% Similarity=0.117 Sum_probs=98.4
Q ss_pred hHHHHHHHcCcEEEEccccCc-cccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGH-LVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~-~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
.|+++|++|++|+-+|-+++. +.....+...+..+...+ -+..+..|. ..+.+.++.+...... ++++ .-..+
T Consensus 274 ~iadiC~k~~lWmHvDAAwGGglLmS~k~R~kl~Giera~--SvtwnpHK~-~gaplqCsa~l~r~~g-ll~~--Cn~~~ 347 (510)
T KOG0629|consen 274 GIADICEKHKLWMHVDAAWGGGLLMSRKHRHKLTGIERAN--SVTWNPHKL-MGAPLQCSAFLTREEG-LLQR--CNQMS 347 (510)
T ss_pred HHHHHHHhcCEEEEeecccccccccChhhHhhccCccccC--ceeecHHHh-hcCcchhhHHHHHHHH-HHHh--hcccc
Confidence 589999999999999999997 333322222333232212 224467787 5567777776666531 2210 00000
Q ss_pred hhhhHHhhhhhh-hh-ccCcchHH----HH--HHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccC--CCcc
Q 047983 81 SISLNMRMDDYL-LL-SESVYTTV----GA--VPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKK--PEGS 150 (233)
Q Consensus 81 ~~~~~~~~~~~~-~~-~~~~~~~~----~~--~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~--~~~g 150 (233)
..-+...-+.|. +. +..-..|- -. +.-+.+..+..=+++..+.+-+.++++...|++-++...... |+
T Consensus 348 A~YLFq~dK~YdvS~DTgdK~iQCGRh~D~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~~~pe-- 425 (510)
T KOG0629|consen 348 AIYLFQQDKFYDVSYDTGDKAIQCGRHVDVFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEMLFELEPE-- 425 (510)
T ss_pred hhhhhccCceeecccccccchhhcCccccHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhcccceehhcCCCc--
Confidence 000000000000 00 00011110 11 222233333444566777788899999999988544221122 44
Q ss_pred EEEEEecCCCcccccccccccCCCCChHH----------HHHHHHhccCEEEECCcccCC-CCcEEEEeec---CHHHHH
Q 047983 151 MFVMYCGSEDKCLLKLNYSLLEGINSDTE----------FALKLAKEESIIVLPGITVGL-KDWLRITFAV---EPSAFE 216 (233)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~ll~~~gi~v~pg~~f~~-~~~~Rl~~~~---~~~~l~ 216 (233)
+..+||--.|..++ +.+++.+ .+....-+.|-..+.=...+. .+|+|+-++. +.++++
T Consensus 426 -~~nv~fw~vp~~lR-------~~~~~~e~~~rL~kVaPkIK~~Mm~~Gt~Mi~YqPl~~~~nffr~v~sn~a~~~ad~d 497 (510)
T KOG0629|consen 426 -HVNVCFWYVPPSLR-------GWQENPERDSRLVKVAPKIKERMMKKGTTMIGYQPLGDKPNFFRMVISNPALTEADLD 497 (510)
T ss_pred -eEEEeeccCchHhc-------cCcccchhhhHHHhhCcHHHHHHHhccceeeEecccccccchhheecccchhhhhhHH
Confidence 33323322222222 1111111 122222244655542222222 6899998875 466667
Q ss_pred HHHHHHHHH
Q 047983 217 IGLGRMKAF 225 (233)
Q Consensus 217 ~~~~~l~~~ 225 (233)
-.++.|..+
T Consensus 498 flldEIerl 506 (510)
T KOG0629|consen 498 FLLDEIERL 506 (510)
T ss_pred HHHHHHHHh
Confidence 776666543
No 382
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=91.75 E-value=9.4 Score=34.20 Aligned_cols=127 Identities=17% Similarity=0.220 Sum_probs=63.1
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCC----CCceEEEEEecCCCccccccchh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIV----PGWRLGWLVTSDPNGILQDLGVA 77 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~----~G~R~G~~~~~~~~~~~~~~~~~ 77 (233)
+|.++++++|..+|+ .--...... ..+...++.+ |++++ +|.||. .|=-.|++.+++ .++++|.-.
T Consensus 217 ~i~~~~h~~gal~~~--~ad~~aL~~--l~~Pge~GAD---I~vg~-~Q~fg~p~~~GGP~~G~~a~~~--~l~r~lPGR 286 (429)
T PF02347_consen 217 EIADIAHAAGALVIV--GADPNALGG--LKSPGEYGAD---IVVGE-HQTFGIPMGFGGPGAGFFAVRE--DLVRQLPGR 286 (429)
T ss_dssp HHHHHHHHTT-EEEE--CGGCCGCCT--C--GGGGT-S---EEEEC-CTTTT---CCC-S--EEEEE-G--GGGGGS-S-
T ss_pred HHHHHHHHcCCEEEE--ecCHHHHhC--cCChhhcCcc---EEeeC-CCCCcccCCCCCCCeeeEEEhh--hhhhhCCCc
Confidence 688999999999886 222222221 1122223332 55665 777643 345589999988 566544322
Q ss_pred hhhh----hhh--------HH------hhhhhhhhccCcchHH-H-HHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhc
Q 047983 78 FFHS----ISL--------NM------RMDDYLLLSESVYTTV-G-AVPQILEKTEEEFFSKITDILREAADICCDRLKE 137 (233)
Q Consensus 78 ~~~~----~~~--------~~------~~~~~~~~~~~~~~~~-~-~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 137 (233)
+.. ..+ .. +-+...++++ +... + +.+.++...+.+=+++..+....+..++.+.|++
T Consensus 287 -iVG~t~D~~G~~~~~ltLqtREQHIrReKAtSNIct--nqaL~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~ 363 (429)
T PF02347_consen 287 -IVGQTKDADGKRAFVLTLQTREQHIRREKATSNICT--NQALLALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKK 363 (429)
T ss_dssp -EEEEEEBCCCSCCEEEE-GGGTCHHHGCCSTT---S--S-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred -eecccccccccceeeeccccccccccccchhhhhhh--hHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 110 000 01 1111112222 2222 2 2233333446677899999999999999999988
Q ss_pred CCCc
Q 047983 138 IPCI 141 (233)
Q Consensus 138 ~~~~ 141 (233)
+.+.
T Consensus 364 ~~~~ 367 (429)
T PF02347_consen 364 IYGL 367 (429)
T ss_dssp TTBE
T ss_pred hcCc
Confidence 6333
No 383
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=88.76 E-value=0.35 Score=40.18 Aligned_cols=53 Identities=17% Similarity=0.181 Sum_probs=33.2
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccC-EEEEccCccccCCC
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVP-VLTLGSISKRWIVP 55 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~-~i~~~s~sK~~~~~ 55 (233)
|+|..+|..|+++=|+..+|+.-. ......+.+...-.+ --++.|+-|.|..|
T Consensus 177 eaiaaica~~diphivnnayglqs--ee~i~~iaa~~~~grida~vqsldknf~vp 230 (432)
T KOG3843|consen 177 EAIAAICAAHDIPHIVNNAYGLQS--EECIHKIAAAAECGRIDAFVQSLDKNFMVP 230 (432)
T ss_pred HHHHHHHHccCchhhhccccccch--HHHHHHHHHHhhhccHHHHHHHhhhcceee
Confidence 579999999999999999998621 111111211111122 14567999988654
No 384
>PRK12566 glycine dehydrogenase; Provisional
Probab=81.65 E-value=53 Score=32.62 Aligned_cols=87 Identities=13% Similarity=0.065 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEE
Q 047983 113 EEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIV 192 (233)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v 192 (233)
+.+=++++.++...+..++.+.|.+. ++.. ....||-. +.+.+.. +.+.+.....+.||-+
T Consensus 350 Gp~Gl~~ia~~~~~~a~~l~~~l~~~-g~~~---~~~~fF~~---------~~v~~~~------~~~~~~~~a~~~~~n~ 410 (954)
T PRK12566 350 GPEGLKRIAQRVHRLTAILAAGLEAK-GIKR---LNRHFFDT---------LTLEVGG------AQAAIIESAEAARINL 410 (954)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHhc-CCcc---ccCCccce---------EEEEccC------CHHHHHHHHHHCCCee
Confidence 45557888899999999999999884 5542 22355555 5554421 3444555566778887
Q ss_pred ECCcccCCCCcEEEEeec--CHHHHHHHHHHH
Q 047983 193 LPGITVGLKDWLRITFAV--EPSAFEIGLGRM 222 (233)
Q Consensus 193 ~pg~~f~~~~~~Rl~~~~--~~~~l~~~~~~l 222 (233)
+-- +++.+.+|+.. +.++++.++..+
T Consensus 411 r~~----~~~~~~~s~de~~~~~~~~~~~~~f 438 (954)
T PRK12566 411 RIL----GRGRLGVSLDETCDEATVARLFDIF 438 (954)
T ss_pred EEe----CCCeEEEEeCCCCCHHHHHHHHHHh
Confidence 642 23567788874 678888777766
No 385
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=79.63 E-value=1.7 Score=36.93 Aligned_cols=55 Identities=24% Similarity=0.291 Sum_probs=35.3
Q ss_pred hHHHHHHH--cCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCC----CCceEEEEEecC
Q 047983 2 CIEETTKK--LGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIV----PGWRLGWLVTSD 66 (233)
Q Consensus 2 ~i~~l~~~--~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~----~G~R~G~~~~~~ 66 (233)
+++.+.++ .|+++++|.+|++|+-..+ + .+++.+ +.-+|+-|.=|. +| ||+++..
T Consensus 190 ~~i~~vk~inpn~ivFVDNCYGEFvE~~E-P---t~vGaD---liAGSLIKNpGGgiaktG---GYiaGk~ 250 (416)
T COG4100 190 EMITFVKEINPNVIVFVDNCYGEFVEEKE-P---THVGAD---LIAGSLIKNPGGGIAKTG---GYIAGKA 250 (416)
T ss_pred HHHHHHHhcCCCEEEEEeccchhhhhccC-c---cccchh---hhccceeeCCCCceeecc---ceeechH
Confidence 45555554 3899999999999984432 2 122332 556788776322 24 7888887
No 386
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=76.91 E-value=55 Score=29.30 Aligned_cols=189 Identities=15% Similarity=0.142 Sum_probs=92.3
Q ss_pred hHHHHHHHcCcEEEEc-cccCccccCCCccccccccCCccCEEEEccCccc---cCCCCceEEEEEecCCCccccccchh
Q 047983 2 CIEETTKKLGIMVIAD-EVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKR---WIVPGWRLGWLVTSDPNGILQDLGVA 77 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~D-e~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~---~~~~G~R~G~~~~~~~~~~~~~~~~~ 77 (233)
+|.+.+++++.++++= |.-+.-. ..|...++. -|++++-.-. .+..|--+||+++.+ ++.++|.-+
T Consensus 231 ~l~~~~h~~~al~~v~aDplaL~L-----L~pPGe~GA---DIvvG~~QrfGvPmgfGGPhag~fA~~~--~~~R~mPGR 300 (450)
T COG0403 231 ALIEAAHSAGALVIVAADPLALGL-----LKPPGEFGA---DIVVGSAQRFGVPMGFGGPHAGYFAVKD--EFKRQMPGR 300 (450)
T ss_pred HHHHHHhhcCCEEEEEechhHhhc-----cCCccccCC---ceEEecCcccCCCcCCCCcceeeeeEhH--hHhhcCCCc
Confidence 5677888887777651 1111000 011112223 2777765542 234467789999988 566554432
Q ss_pred ------hhhhh-----hhH------HhhhhhhhhccCcchHH-HHHHHH-hhhcHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 047983 78 ------FFHSI-----SLN------MRMDDYLLLSESVYTTV-GAVPQI-LEKTEEEFFSKITDILREAADICCDRLKEI 138 (233)
Q Consensus 78 ------~~~~~-----~~~------~~~~~~~~~~~~~~~~~-~~~~~~-l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 138 (233)
+.+.+ .+. ++-+...++|+ +... +.++++ ..-.+.+=++++.++..+...++.+.|++.
T Consensus 301 lVG~S~D~~G~~A~rLaLQTREQHIRReKATSNICT--nQaLlA~~As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~ 378 (450)
T COG0403 301 LVGVSVDAAGKRAFRLALQTREQHIRREKATSNICT--NQALLALAASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKEI 378 (450)
T ss_pred eeeeeecCCCCchhhhhHHHHHHHHhhhccchhhhH--HHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 00000 000 11111122332 2222 222222 222456778999999999999999999975
Q ss_pred C-CcccccCCCccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec--CHHHH
Q 047983 139 P-CITCPKKPEGSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV--EPSAF 215 (233)
Q Consensus 139 ~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~--~~~~l 215 (233)
+ +... .. ..+|-. +.+.++. +..+.+.......|+-+.. +.. ..+=+|+.. +.+++
T Consensus 379 ~~g~~~--~~-~~fFdt---------~~v~~~~-----~~~~~l~~~~~~~G~~L~~---~~~-~~~~ia~tEt~t~~~i 437 (450)
T COG0403 379 GAGVEL--VF-DHFFDT---------FTVRVPE-----EVAEALLAAAIAGGINLRR---VDA-DTVLIALTETTTKEDI 437 (450)
T ss_pred CCceEe--cc-ccceee---------EEEecch-----hHHHHHHHHHHhcCCceee---ecC-CceEEEeecccCHHHH
Confidence 4 2221 11 255555 4444321 1334444444455776653 222 234445543 45555
Q ss_pred HHHHHHHH
Q 047983 216 EIGLGRMK 223 (233)
Q Consensus 216 ~~~~~~l~ 223 (233)
+...+.+.
T Consensus 438 ~~l~~~~~ 445 (450)
T COG0403 438 DALVAAFG 445 (450)
T ss_pred HHHHHHHh
Confidence 55555543
No 387
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=76.71 E-value=50 Score=29.11 Aligned_cols=110 Identities=17% Similarity=0.207 Sum_probs=68.6
Q ss_pred HHHHHHhhhc-HHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCCCccccccccccc-CCC----CC
Q 047983 103 GAVPQILEKT-EEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSEDKCLLKLNYSLL-EGI----NS 176 (233)
Q Consensus 103 ~~~~~~l~~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~----~~ 176 (233)
++++.-|.+. ..+|++..... .++|.+.|++. +... ..|.||--.+ ++..++ +.+ -+
T Consensus 314 ealAvGL~e~~~~~yl~~Rv~Q----v~YL~~~l~~~-GVpi-~~paGGHavf-----------vda~~~lphip~eqFp 376 (471)
T COG3033 314 EALAVGLREGVNFDYLAHRVAQ----VQYLADGLEEA-GVPI-VQPAGGHAVF-----------VDAGKFLPHIPAEQFP 376 (471)
T ss_pred HHHHHHHHHhcCcHHHHHHHHH----HHHHHHHHHhc-CCee-EecCCCceEE-----------eehhhhcCCCChhhCc
Confidence 5555544333 33566555544 35667777776 4432 5777877666 332221 111 13
Q ss_pred hHHHHHHHHhccCEEEECCcccCC-------------CCcEEEEeec---CHHHHHHHHHHHHHHHHHH
Q 047983 177 DTEFALKLAKEESIIVLPGITVGL-------------KDWLRITFAV---EPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 177 ~~~~~~~ll~~~gi~v~pg~~f~~-------------~~~~Rl~~~~---~~~~l~~~~~~l~~~l~~~ 229 (233)
...++..+.++.||..+--..|.. ..-+|+++.- +.+-++-..+.+.++.++-
T Consensus 377 aqala~ely~e~GiRavElG~~~~~rd~ktg~q~~~~~elvRltipRrtYt~~HmD~V~~a~~~l~e~~ 445 (471)
T COG3033 377 AQALACELYKEAGIRAVELGSFSLGRDPKTGKQHPPPAELVRLTIPRRTYTQTHMDFVIEAFKALKENA 445 (471)
T ss_pred HHHHHHHHHHHhCeeeeeeeceecccCCCccccCCCchheeeEeccccccchhHHHHHHHHHHHHHhcc
Confidence 567888889999999987666641 2569998873 6777888888777766543
No 388
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=57.80 E-value=1e+02 Score=29.15 Aligned_cols=64 Identities=22% Similarity=0.217 Sum_probs=40.0
Q ss_pred ChHHHHH---HHcCc--EEEEccccCccc---c-CCC-ccccc----------------------------cccCCccCE
Q 047983 1 FCIEETT---KKLGI--MVIADEVYGHLV---F-GNT-HFVPM----------------------------GVFGSIVPV 42 (233)
Q Consensus 1 ~~i~~l~---~~~~~--~lI~De~y~~~~---~-~~~-~~~~~----------------------------~~~~~~~~~ 42 (233)
++|+++| +++|+ ++-+|-+|+.+. + +.. .+.|+ ..+.. -.-
T Consensus 298 ~eI~~l~~~~~~~gl~~~lHVDAAyGG~~~~l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~-ADS 376 (608)
T TIGR03811 298 DKIVALRNKLMKEGIYFYLHVDAAYGGYGRAIFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAISE-AES 376 (608)
T ss_pred HHHHHHHHHHHHcCCceeEeeeccccchhhhhhccccccccccchhhcccccccccccccccccHhHHHHHhcCcC-ceE
Confidence 3688888 67888 699999999853 1 110 11111 11111 111
Q ss_pred EEEccCccccCCCCceEEEEEecCC
Q 047983 43 LTLGSISKRWIVPGWRLGWLVTSDP 67 (233)
Q Consensus 43 i~~~s~sK~~~~~G~R~G~~~~~~~ 67 (233)
| .-.+.|. +..-..+|.+..++.
T Consensus 377 I-tvDpHK~-g~~Py~~G~ll~Rd~ 399 (608)
T TIGR03811 377 V-TIDPHKM-GYIPYSAGGIVIQDI 399 (608)
T ss_pred E-EeCcccc-cccCCCeEEEEEeCH
Confidence 2 3478897 788889999999884
No 389
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=57.61 E-value=5.4 Score=33.76 Aligned_cols=60 Identities=15% Similarity=0.059 Sum_probs=33.0
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecC
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD 66 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~ 66 (233)
+|.++|++||+.|..|=+=-.-.... ...++..+...-. ++..|++|..++++ |-+++-+
T Consensus 149 ai~~~a~~~gl~lhmDGARl~~a~~~-~~~~~~e~~~~~D-~v~~~~tK~~g~~~---Gavl~~~ 208 (290)
T PF01212_consen 149 AISELAREHGLPLHMDGARLANAAAA-LGVSLAEIAAGAD-SVSFGGTKNGGAPG---GAVLAGN 208 (290)
T ss_dssp HHHHHHHHHT-EEEEEETTHHHHHCH-HHHHHHHHHTTSS-EEEEETTSTT-SSS---EEEEEES
T ss_pred HHHHHHHhCceEEEEehhhHHHhhhc-ccccHHHHhhhCC-EEEEEEEccccccc---ceEEEec
Confidence 68899999999999997632111000 0011222211111 56679999877766 6655554
No 390
>TIGR00789 flhB_rel flhB C-terminus-related protein. This model describes a short protein (80-93 residues) homologous to the C-terminus of the flagellar biosynthetic protein FlhB. It is found so far only in species that also have FlhB. In a phylogenetic tree based on alignment of both this family and the homologous region of FlhB and its homologs, the members of this family form a monophyletic set.
Probab=52.48 E-value=9.7 Score=25.73 Aligned_cols=25 Identities=28% Similarity=0.291 Sum_probs=20.5
Q ss_pred ChHHHHHHHcCcEEEEccccCcccc
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVF 25 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~ 25 (233)
++|.++++++|++++.|..-....+
T Consensus 30 ~~I~~~A~e~~VPi~~~~~LAr~L~ 54 (82)
T TIGR00789 30 ERIIEIAKKHGIPIVEDPDLVDVLL 54 (82)
T ss_pred HHHHHHHHHcCCCEEeCHHHHHHHH
Confidence 3689999999999999987765444
No 391
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=51.87 E-value=9.8 Score=32.07 Aligned_cols=67 Identities=15% Similarity=0.144 Sum_probs=43.8
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCC----------ceEEEEEecCCCccc
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPG----------WRLGWLVTSDPNGIL 71 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G----------~R~G~~~~~~~~~~~ 71 (233)
-|++.|++.|.++|- +=.+++|+|....++..-+.. +=+.+.+-||..|--. +|.+|+.+.....++
T Consensus 83 ~lA~aa~~~ga~lVh--iSTDyVFDG~~~~~Y~E~D~~-~P~nvYG~sKl~GE~~v~~~~~~~~I~Rtswv~g~~g~nFv 159 (281)
T COG1091 83 NLARAAAEVGARLVH--ISTDYVFDGEKGGPYKETDTP-NPLNVYGRSKLAGEEAVRAAGPRHLILRTSWVYGEYGNNFV 159 (281)
T ss_pred HHHHHHHHhCCeEEE--eecceEecCCCCCCCCCCCCC-CChhhhhHHHHHHHHHHHHhCCCEEEEEeeeeecCCCCCHH
Confidence 478999999999996 334777888665555544432 2244667777654322 588898888654444
No 392
>PF04237 YjbR: YjbR; InterPro: IPR007351 This is a family of uncharacterised proteins.; PDB: 3H9X_D 2KFP_A 2FKI_A 2A1V_A.
Probab=51.21 E-value=74 Score=21.44 Aligned_cols=43 Identities=14% Similarity=0.330 Sum_probs=26.1
Q ss_pred hHHHHHHHHhc-cCEEEECCcccCCCCcEEEEee-c-CHHHHHHHHHH
Q 047983 177 DTEFALKLAKE-ESIIVLPGITVGLKDWLRITFA-V-EPSAFEIGLGR 221 (233)
Q Consensus 177 ~~~~~~~ll~~-~gi~v~pg~~f~~~~~~Rl~~~-~-~~~~l~~~~~~ 221 (233)
+.+....+.+. .++ .|+..++..+|+.+.+. . +.+++++.++.
T Consensus 42 ~~e~~~~l~~~~~~~--~p~~h~~k~~Wv~v~l~~~v~~~~l~~li~~ 87 (92)
T PF04237_consen 42 DPEEQEALREQYDGF--FPAYHMNKKHWVSVRLDGDVDDEELRELIDE 87 (92)
T ss_dssp -HHHHHHHHHSSTTE--EE-TSS-TTTEEEEETTSSS-HHHHHHHHHH
T ss_pred CHHHHHHHHhhCCCE--EeCCccCCCcEEEEEeCCCCCHHHHHHHHHH
Confidence 44455556666 444 44557777899999993 4 77777777654
No 393
>COG2257 Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB [Function unknown]
Probab=50.95 E-value=7 Score=26.81 Aligned_cols=24 Identities=25% Similarity=0.263 Sum_probs=19.7
Q ss_pred ChHHHHHHHcCcEEEEccccCccc
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLV 24 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~ 24 (233)
|+|++.|++|++++.+|..--+..
T Consensus 35 e~II~~Ake~~Vpi~edp~Lv~~L 58 (92)
T COG2257 35 EKIIEKAKEHGVPIQEDPLLVELL 58 (92)
T ss_pred HHHHHHHHHcCCCcccCHHHHHHH
Confidence 578999999999999998766543
No 394
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=44.64 E-value=2e+02 Score=24.60 Aligned_cols=107 Identities=19% Similarity=0.240 Sum_probs=56.4
Q ss_pred HHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcC-CCcccccCCCccEEEEEecCCCcccccccccccCCCCChHHHHH
Q 047983 104 AVPQILEKTEEEFFSKITDILREAADICCDRLKEI-PCITCPKKPEGSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFAL 182 (233)
Q Consensus 104 ~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (233)
.+..+++.++ +..+.+.-.++.+.+.+.+.+. +...+++.|..---+- +++.-. ..+=+.+|+.
T Consensus 259 v~~~il~~GG---l~a~e~~n~~KskllYd~iD~s~gfy~cpVe~~~RS~MN-----------V~Fri~-~d~Le~eFLk 323 (370)
T KOG2790|consen 259 VFEWILEKGG---LAAMEKLNQEKSKLLYDAIDNSNGFYRCPVEPSVRSRMN-----------VPFRIE-KDELEAEFLK 323 (370)
T ss_pred HHHHHHhccc---HHHHHHHHHHHHHHHHHHHHhcCCeEEcccchhhhhhcc-----------cceeec-chHHHHHHHH
Confidence 3444444333 3556666778889999999774 3444444443222222 222211 0001456666
Q ss_pred HHHhccCEEEECCcccCCCCcEEEEeec--CHHHHHHHHHHHHHHHHH
Q 047983 183 KLAKEESIIVLPGITVGLKDWLRITFAV--EPSAFEIGLGRMKAFYYR 228 (233)
Q Consensus 183 ~ll~~~gi~v~pg~~f~~~~~~Rl~~~~--~~~~l~~~~~~l~~~l~~ 228 (233)
...+++ ++-.-|.. +-+.+|-|+-. +-++.+.+.+-++++.+.
T Consensus 324 eA~~~~-mv~LKGhR--SVGGiRASlYNAisv~~~q~L~~~m~~F~k~ 368 (370)
T KOG2790|consen 324 EAAKEH-MVQLKGHR--SVGGIRASLYNAISVEEVQKLAAFMKEFQKK 368 (370)
T ss_pred HHHHhh-hhcccccc--ccccchhhhhccccHHHHHHHHHHHHHHHHh
Confidence 666554 44333332 34678888875 666666666655555543
No 395
>PF13872 AAA_34: P-loop containing NTP hydrolase pore-1
Probab=36.99 E-value=18 Score=30.80 Aligned_cols=22 Identities=9% Similarity=-0.006 Sum_probs=18.4
Q ss_pred ChHHHHHH-HcCcEEEEccccCc
Q 047983 1 FCIEETTK-KLGIMVIADEVYGH 22 (233)
Q Consensus 1 ~~i~~l~~-~~~~~lI~De~y~~ 22 (233)
++|+++|. .++..||.||+|.-
T Consensus 162 ~ql~~W~g~dfdgvivfDEcH~a 184 (303)
T PF13872_consen 162 DQLVDWCGEDFDGVIVFDECHKA 184 (303)
T ss_pred HHHHHHHhcCCCceEEeccchhc
Confidence 36888994 57999999999985
No 396
>PF08544 GHMP_kinases_C: GHMP kinases C terminal ; InterPro: IPR013750 This domain is found in homoserine kinases (2.7.1.39 from EC), galactokinases (2.7.1.6 from EC) and mevalonate kinases (2.7.1.36 from EC). These kinases make up the GHMP kinase superfamily of ATP-dependent enzymes []. These enzymes are involved in the biosynthesis of isoprenes and amino acids as well as in carbohydrate metabolism. The C-terminal domain of homoserine kinase has a central alpha-beta plait fold and an insertion of four helices, which, together with the N-terminal fold, create a novel nucleotide binding fold [].; PDB: 2R3V_C 4EMD_A 4DXL_A 4ED4_A 2GS8_A 1K47_E 3GON_A 3K17_B 1PIE_A 2AJ4_A ....
Probab=34.88 E-value=1.3e+02 Score=19.48 Aligned_cols=46 Identities=11% Similarity=0.076 Sum_probs=30.5
Q ss_pred hHHHHHHHHhccC--EEEECCcccCCCCcEEEEeecCHHHHHHHHHHHHHH
Q 047983 177 DTEFALKLAKEES--IIVLPGITVGLKDWLRITFAVEPSAFEIGLGRMKAF 225 (233)
Q Consensus 177 ~~~~~~~ll~~~g--i~v~pg~~f~~~~~~Rl~~~~~~~~l~~~~~~l~~~ 225 (233)
....+.+.+++.| ..-.+|+++| +.+ +.+..+++..+++.+.+++.
T Consensus 35 ~i~~~~~~~~~~Ga~~~~~sGsG~G--~~v-~~l~~~~~~~~~v~~~l~~~ 82 (85)
T PF08544_consen 35 EIDELKEAAEENGALGAKMSGSGGG--PTV-FALCKDEDDAERVAEALREH 82 (85)
T ss_dssp HHHHHHHHHHHTTESEEEEETTSSS--SEE-EEEESSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCceecCCCCCC--CeE-EEEECCHHHHHHHHHHHHHh
Confidence 5667777788888 4455566555 344 56666777777777777654
No 397
>PF09186 DUF1949: Domain of unknown function (DUF1949); InterPro: IPR015269 Members of this entry are a set of functionally uncharacterised hypothetical bacterial proteins. They adopt a ferredoxin-like fold, with a beta-alpha-beta-beta-alpha-beta arrangement []. This entry contains the protein Impact, which is a translational regulator that ensures constant high levels of translation under amino acid starvation. It acts by interacting with Gcn1/Gcn1L1, thereby preventing activation of Gcn2 protein kinases (EIF2AK1 to 4) and subsequent down-regulation of protein synthesis. It is evolutionary conserved from eukaryotes to archaea []. ; PDB: 2CVE_A 1VI7_A.
Probab=33.21 E-value=77 Score=18.81 Aligned_cols=45 Identities=13% Similarity=0.071 Sum_probs=29.7
Q ss_pred hHHHHHHHHhccCEEEECCcccCCCCcEEEEeecCHHHHHHHHHHHHH
Q 047983 177 DTEFALKLAKEESIIVLPGITVGLKDWLRITFAVEPSAFEIGLGRMKA 224 (233)
Q Consensus 177 ~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~~~~~l~~~~~~l~~ 224 (233)
....+.+++.+.++.+.. ..|+.. +.+.+..++++.++..+.|.+
T Consensus 7 ~~~~v~~~l~~~~~~i~~-~~y~~~--V~~~v~v~~~~~~~f~~~l~~ 51 (56)
T PF09186_consen 7 QYGKVERLLEQNGIEIVD-EDYTDD--VTLTVAVPEEEVEEFKAQLTD 51 (56)
T ss_dssp CHHHHHHHHHHTTTEEEE-EEECTT--EEEEEEEECCCHHHHHHHHHH
T ss_pred hHHHHHHHHHHCCCEEEc-ceecce--EEEEEEECHHHHHHHHHHHHH
Confidence 567788899999988876 345433 677766655555555555543
No 398
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=32.81 E-value=44 Score=28.59 Aligned_cols=27 Identities=30% Similarity=0.447 Sum_probs=20.8
Q ss_pred hHHHHHHHcC-----cEEEEccccCccccCCC
Q 047983 2 CIEETTKKLG-----IMVIADEVYGHLVFGNT 28 (233)
Q Consensus 2 ~i~~l~~~~~-----~~lI~De~y~~~~~~~~ 28 (233)
.|++.+++++ ++|=.||+|+++..+++
T Consensus 107 ~LLEaar~~~~~frf~HISTDEVYG~l~~~~~ 138 (340)
T COG1088 107 TLLEAARKYWGKFRFHHISTDEVYGDLGLDDD 138 (340)
T ss_pred HHHHHHHHhcccceEEEeccccccccccCCCC
Confidence 3678888887 35668999999987653
No 399
>PF06153 DUF970: Protein of unknown function (DUF970); InterPro: IPR010375 This is a family of uncharacterised bacterial proteins.; PDB: 3M05_A.
Probab=32.07 E-value=55 Score=23.42 Aligned_cols=53 Identities=15% Similarity=0.052 Sum_probs=33.9
Q ss_pred hHHHHHHHHhccCEEEECCcccCC---CCcEEEEeecCHHHHHHHHHHHHHHHHHH
Q 047983 177 DTEFALKLAKEESIIVLPGITVGL---KDWLRITFAVEPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 177 ~~~~~~~ll~~~gi~v~pg~~f~~---~~~~Rl~~~~~~~~l~~~~~~l~~~l~~~ 229 (233)
+...+...|.++|+.+.--+.-|+ .+-.-+=++.++++++++++.|++..++.
T Consensus 12 Da~~l~~~L~~~g~~~TkLsstGGFLr~GNtTlliGvede~v~~vl~iIk~~c~~R 67 (109)
T PF06153_consen 12 DADDLSDALNENGFRVTKLSSTGGFLREGNTTLLIGVEDEKVDEVLEIIKENCKKR 67 (109)
T ss_dssp HHHHHHHHHHHTT--EEEEEEEETTTTEEEEEEEEEEEGGGHHHHHHHHHHHH--E
T ss_pred hHHHHHHHHHHCCceEEEEecccceeccCCEEEEEEecHHHHHHHHHHHHHhhcCc
Confidence 667777888899999876444442 22222344558889999999999877653
No 400
>COG4050 Uncharacterized protein conserved in archaea [Function unknown]
Probab=31.18 E-value=1.7e+02 Score=21.32 Aligned_cols=45 Identities=11% Similarity=0.200 Sum_probs=33.9
Q ss_pred hHHHHHHHHhccCEEEECCcccCCCCcEEEEeecCHHHHHHHHHHHHHHHHHHhhc
Q 047983 177 DTEFALKLAKEESIIVLPGITVGLKDWLRITFAVEPSAFEIGLGRMKAFYYRHAKK 232 (233)
Q Consensus 177 ~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~~~~~l~~~~~~l~~~l~~~~~~ 232 (233)
+-+++..+++++||-+ +++-+..++++-......|..+++.+..+
T Consensus 106 TNEl~~ylvR~k~iPi-----------LelkYP~s~Eea~~~VnkI~~FL~sLe~~ 150 (152)
T COG4050 106 TNELCVYLVRRKGIPI-----------LELKYPRSEEEAIDFVNKIANFLKSLEAQ 150 (152)
T ss_pred cchHHHHHhhhcCCce-----------EEEeCCCcHHHHHHHHHHHHHHHHhhhhh
Confidence 4566666677767655 36777778888899999999999887654
No 401
>COG0352 ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
Probab=29.49 E-value=38 Score=27.29 Aligned_cols=20 Identities=15% Similarity=0.293 Sum_probs=17.6
Q ss_pred hHHHHHHHcCcEEEEccccC
Q 047983 2 CIEETTKKLGIMVIADEVYG 21 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~ 21 (233)
++.++|++|++.+|+++-..
T Consensus 56 ~~~~lc~~~~v~liINd~~d 75 (211)
T COG0352 56 KLRALCQKYGVPLIINDRVD 75 (211)
T ss_pred HHHHHHHHhCCeEEecCcHH
Confidence 68899999999999988665
No 402
>PF00224 PK: Pyruvate kinase, barrel domain; InterPro: IPR015793 Pyruvate kinase (2.7.1.40 from EC) (PK) catalyses the final step in glycolysis [], the conversion of phosphoenolpyruvate to pyruvate with concomitant phosphorylation of ADP to ATP: ADP + phosphoenolpyruvate = ATP + pyruvate The enzyme, which is found in all living organisms, requires both magnesium and potassium ions for its activity. In vertebrates, there are four tissue-specific isozymes: L (liver), R (red cells), M1 (muscle, heart and brain), and M2 (early foetal tissue). In plants, PK exists as cytoplasmic and plastid isozymes, while most bacteria and lower eukaryotes have one form, except in certain bacteria, such as Escherichia coli, that have two isozymes. All isozymes appear to be tetramers of identical subunits of ~500 residues. PK helps control the rate of glycolysis, along with phosphofructokinase (IPR000023 from INTERPRO) and hexokinase (IPR001312 from INTERPRO). PK possesses allosteric sites for numerous effectors, yet the isozymes respond differently, in keeping with their different tissue distributions []. The activity of L-type (liver) PK is increased by fructose-1,6-bisphosphate (F1,6BP) and lowered by ATP and alanine (gluconeogenic precursor), therefore when glucose levels are high, glycolysis is promoted, and when levels are low, gluconeogenesis is promoted. L-type PK is also hormonally regulated, being activated by insulin and inhibited by glucagon, which covalently modifies the PK enzyme. M1-type (muscle, brain) PK is inhibited by ATP, but F1,6BP and alanine have no effect, which correlates with the function of muscle and brain, as opposed to the liver. The structure of several pyruvate kinases from various organisms have been determined [, ]. The protein comprises three-four domains: a small N-terminal helical domain (absent in bacterial PK), a beta/alpha-barrel domain, a beta-barrel domain (inserted within the beta/alpha-barrel domain), and a 3-layer alpha/beta/alpha sandwich domain. This entry represents the two barrel domains, the beta/alpha-barrel, and the beta-barrel inserted within it.; GO: 0000287 magnesium ion binding, 0004743 pyruvate kinase activity, 0030955 potassium ion binding, 0006096 glycolysis; PDB: 3HQQ_W 3KTX_A 3E0V_A 3QV6_D 3QV7_D 1PKL_D 3HQP_A 3QV8_D 3HQO_C 3IS4_B ....
Probab=24.77 E-value=2.4e+02 Score=24.47 Aligned_cols=43 Identities=19% Similarity=0.164 Sum_probs=32.7
Q ss_pred ChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec-CHHHHHHHHHHHHHHHHHHh
Q 047983 176 SDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV-EPSAFEIGLGRMKAFYYRHA 230 (233)
Q Consensus 176 ~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~-~~~~l~~~~~~l~~~l~~~~ 230 (233)
.+.+.+.+++ +.|+-+ +|++++. +.+...+.++.++++.+++.
T Consensus 15 ~~~e~l~~li-~aGm~v-----------~RiN~SHg~~e~~~~~i~~iR~a~~~~~ 58 (348)
T PF00224_consen 15 ESVEVLRKLI-EAGMNV-----------ARINFSHGTHEEHKEIIENIREAEKELG 58 (348)
T ss_dssp CSHHHHHHHH-HHTEEE-----------EEEETTSS-HHHHHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHH-HhccEE-----------EEEeeecCCHHHHHHHHHHHHHHHhccC
Confidence 3667777766 447765 4999998 88999999999998877654
No 403
>COG1560 HtrB Lauroyl/myristoyl acyltransferase [Cell envelope biogenesis, outer membrane]
Probab=23.64 E-value=4.7e+02 Score=22.39 Aligned_cols=53 Identities=21% Similarity=0.169 Sum_probs=37.2
Q ss_pred hHHHHHHHHhccCEEEECCcccC-C-CCcEEEEeec-----CHHHHHHHHHHHHHHHHHH
Q 047983 177 DTEFALKLAKEESIIVLPGITVG-L-KDWLRITFAV-----EPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 177 ~~~~~~~ll~~~gi~v~pg~~f~-~-~~~~Rl~~~~-----~~~~l~~~~~~l~~~l~~~ 229 (233)
+.....+++...|..|.|..... + .+.+++.+.. ..++++...++|.+.+++.
T Consensus 222 T~t~~~~LA~~~~a~vip~~~~r~~~g~~y~l~i~p~~~~~~~~D~~~~a~~mn~~~E~~ 281 (308)
T COG1560 222 TTTGPAKLARLTGAAVVPVFPVRNPDGSGYTLHIHPPMTDDPSEDVEADAQRMNDFVEKW 281 (308)
T ss_pred ccchHHHHHHHhCCCEEEEEEEEeCCCCeEEEEEeccccCCCCCCHHHHHHHHHHHHHHH
Confidence 34455667777888888865554 2 4568887765 4566788888888888765
No 404
>PF13549 ATP-grasp_5: ATP-grasp domain; PDB: 1WR2_A.
Probab=23.33 E-value=2.6e+02 Score=22.65 Aligned_cols=53 Identities=19% Similarity=0.158 Sum_probs=32.3
Q ss_pred hHHHHHHHHhccCEEEECCcccCC-----------------------------CCcEEEEeecCHHHHHHHHHHHHHHHH
Q 047983 177 DTEFALKLAKEESIIVLPGITVGL-----------------------------KDWLRITFAVEPSAFEIGLGRMKAFYY 227 (233)
Q Consensus 177 ~~~~~~~ll~~~gi~v~pg~~f~~-----------------------------~~~~Rl~~~~~~~~l~~~~~~l~~~l~ 227 (233)
++...+.+|..+||-+.|...... -+.+|+++. ++++++++.++|.+.+.
T Consensus 11 ~e~e~~~lL~~yGI~~~~~~~~~~~~ea~~~a~~ig~PvvlKi~sp~i~HKsd~GgV~L~l~-~~~~v~~a~~~l~~~~~ 89 (222)
T PF13549_consen 11 TEAEAKELLAAYGIPVPPTRLVTSAEEAVAAAEEIGFPVVLKIVSPDIAHKSDVGGVRLNLN-SPEEVREAFERLRERVA 89 (222)
T ss_dssp -HHHHHHHHHTTT------EEESSHHHHHHHHHHH-SSEEEEEE-TT---HHHHT-EEEEE--SHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCcCCCCeeEeCCHHHHHHHHHHhCCCEEEEEecCCCCcCCCCCcEEECCC-CHHHHHHHHHHHHHHHH
Confidence 566777888888888888655531 267888887 66678999999998887
Q ss_pred HHh
Q 047983 228 RHA 230 (233)
Q Consensus 228 ~~~ 230 (233)
++.
T Consensus 90 ~~~ 92 (222)
T PF13549_consen 90 AHH 92 (222)
T ss_dssp HH-
T ss_pred HhC
Confidence 643
No 405
>cd04937 ACT_AKi-DapG-BS_2 ACT domains of the diaminopimelate-sensitive aspartokinase (AK) isoenzyme AKI. This CD includes the C-terminal of the two ACT domains of the diaminopimelate-sensitive aspartokinase (AK) isoenzyme AKI, a monofunctional class enzyme found in Bacilli (Bacillus subtilis (BS) strain 168), Clostridia, and Actinobacteria bacterial species. In B. subtilis, the regulation of the diaminopimelate-lysine biosynthetic pathway involves dual control by diaminopimelate and lysine, effected through separate diaminopimelate- and lysine-sensitive AK isoenzymes. AKI activity is invariant during the exponential and stationary phases of growth and is not altered by addition of amino acids to the growth medium. The role of this isoenzyme is most likely to provide a constant level of aspartyl-beta-phosphate for the biosynthesis of diaminopimelate for peptidoglycan synthesis and dipicolinate during sporulation. The BS AKI is tetrameric consisting of two alpha and two beta subunits; th
Probab=22.18 E-value=2e+02 Score=17.65 Aligned_cols=45 Identities=11% Similarity=0.132 Sum_probs=33.7
Q ss_pred HHHHHHHHhccCEEEECCcccCCCCcEEEEeecCHHHHHHHHHHHHHHH
Q 047983 178 TEFALKLAKEESIIVLPGITVGLKDWLRITFAVEPSAFEIGLGRMKAFY 226 (233)
Q Consensus 178 ~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~~~~~l~~~~~~l~~~l 226 (233)
...+...|.+.||.+.-.+ ..-..+++..+.++.+++++.|.+.+
T Consensus 18 ~~~if~aL~~~~I~v~~~~----~Se~~is~~v~~~~~~~av~~Lh~~f 62 (64)
T cd04937 18 MAKIVGALSKEGIEILQTA----DSHTTISCLVSEDDVKEAVNALHEAF 62 (64)
T ss_pred HHHHHHHHHHCCCCEEEEE----cCccEEEEEEcHHHHHHHHHHHHHHh
Confidence 4566667788999996432 24567888888888899998887654
No 406
>cd04922 ACT_AKi-HSDH-ThrA_2 ACT domains of the bifunctional enzyme aspartokinase (AK) - homoserine dehydrogenase (HSDH). This CD includes the second of two ACT domains of the bifunctional enzyme aspartokinase (AK) - homoserine dehydrogenase (HSDH). The ACT domains are positioned between the N-terminal catalytic domain of AK and the C-terminal HSDH domain found in bacteria (Escherichia coli (EC) ThrA) and higher plants (Zea mays AK-HSDH). AK and HSDH are the first and third enzymes in the biosynthetic pathway of the aspartate family of amino acids. AK catalyzes the phosphorylation of Asp to P-aspartyl phosphate. HSDH catalyzes the NADPH-dependent conversion of Asp 3-semialdehyde to homoserine. HSDH is the first committed reaction in the branch of the pathway that leads to Thr and Met. In E. coli, ThrA is subject to allosteric regulation by the end product L-threonine and the native enzyme is reported to be tetrameric. As with bacteria, plant AK and HSDH are feedback inhibited by pathwa
Probab=21.66 E-value=2e+02 Score=17.35 Aligned_cols=48 Identities=6% Similarity=-0.002 Sum_probs=31.9
Q ss_pred hHHHHHHHHhccCEEEECCcccCCCCcEEEEeecCHHHHHHHHHHHHHHH
Q 047983 177 DTEFALKLAKEESIIVLPGITVGLKDWLRITFAVEPSAFEIGLGRMKAFY 226 (233)
Q Consensus 177 ~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~~~~~l~~~~~~l~~~l 226 (233)
-...+...|.+.||.+.--+ .+. .-.++++..++++.+++++.|.+.+
T Consensus 17 ~~~~i~~~l~~~~I~v~~i~-~~~-s~~~is~~v~~~~~~~~~~~lh~~~ 64 (66)
T cd04922 17 VAATFFSALAKANVNIRAIA-QGS-SERNISAVIDEDDATKALRAVHERF 64 (66)
T ss_pred HHHHHHHHHHHCCCCEEEEE-ecC-cccEEEEEEeHHHHHHHHHHHHHHH
Confidence 35567777888888773211 111 2378888888888888888877654
No 407
>PF01974 tRNA_int_endo: tRNA intron endonuclease, catalytic C-terminal domain; InterPro: IPR006677 This entry represents a 3-layer alpha/beta/alpha domain found as the catalytic domain at the C-terminal in homotetrameric tRNA-intron endonucleases [], and as domains 2 and 4 (C-terminal) in the homodimeric enzymes []. tRNA-intron endonucleases (3.1.27.9 from EC) remove tRNA introns by cleaving pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3' cyclic phosphate and 5'-hydroxyl termini []. These enzymes recognise a pseudosymmetric substrate in which 2 bulged loops of 3 bases are separated by a stem of 4 bp []. Although homotetrameric enzymes contain four active sites, only two participate in the cleavage, and should therefore, be considered as a dimer of dimers.; GO: 0000213 tRNA-intron endonuclease activity, 0006388 tRNA splicing, via endonucleolytic cleavage and ligation; PDB: 3IEY_B 3IF0_X 2CV8_A 3P1Z_B 3AJV_B 2GJW_D 1R0V_A 3P1Y_C 1R11_B 1RLV_A ....
Probab=20.95 E-value=72 Score=21.30 Aligned_cols=21 Identities=24% Similarity=0.417 Sum_probs=17.0
Q ss_pred HHHHHHhccCEEEECCcccCC
Q 047983 180 FALKLAKEESIIVLPGITVGL 200 (233)
Q Consensus 180 ~~~~ll~~~gi~v~pg~~f~~ 200 (233)
.+++-|+++|..+.||.-||.
T Consensus 6 ~vY~dLr~rG~~v~~G~kfG~ 26 (85)
T PF01974_consen 6 AVYRDLRSRGYVVKPGIKFGC 26 (85)
T ss_dssp HHHHHHHHTT-EEEEEGGGTS
T ss_pred HHHHHHHHCCCEECccCcCCc
Confidence 467889999999999998873
No 408
>cd04915 ACT_AK-Ectoine_2 ACT domains located C-terminal to the catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway. This CD includes the second of two ACT domains located C-terminal to the catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway found in Methylomicrobium alcaliphilum, Vibrio cholerae, and various other halotolerant or halophilic bacteria. Bacteria exposed to hyperosmotic stress accumulate organic solutes called 'compatible solutes' of which ectoine, a heterocyclic amino acid, is one. Apart from its osmotic function, ectoine also exhibits a protective effect on proteins, nucleic acids and membranes against a variety of stress factors. de novo synthesis of ectoine starts with the phosphorylation of L-aspartate and shares its first two enzymatic steps with the biosynthesis of amino acids of the aspartate family: aspartokinas
Probab=20.33 E-value=2.3e+02 Score=17.66 Aligned_cols=47 Identities=13% Similarity=0.157 Sum_probs=32.9
Q ss_pred HHHHHHHHhccCEEEECCcccCCCCcEEEEeecCHHHHHHHHHHHHHHH
Q 047983 178 TEFALKLAKEESIIVLPGITVGLKDWLRITFAVEPSAFEIGLGRMKAFY 226 (233)
Q Consensus 178 ~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~~~~~l~~~~~~l~~~l 226 (233)
...+...|.+.||-+.-- .. +.+-.++++..+.++.+++++.|.+.+
T Consensus 18 ~~ki~~~L~~~~I~v~~i-~~-~~s~~~is~~V~~~~~~~av~~Lh~~f 64 (66)
T cd04915 18 LARGLAALAEAGIEPIAA-HQ-SMRNVDVQFVVDRDDYDNAIKALHAAL 64 (66)
T ss_pred HHHHHHHHHHCCCCEEEE-Ee-cCCeeEEEEEEEHHHHHHHHHHHHHHH
Confidence 455666678888888321 11 124578999988889999999987654
No 409
>cd04924 ACT_AK-Arch_2 ACT domains of a monofunctional aspartokinase found mostly in Archaea species (ACT_AK-Arch_2). Included in this CD is the second of two ACT domains of a monofunctional aspartokinase found mostly in Archaea species (ACT_AK-Arch_2). The first or N-terminal ACT domain of these proteins cluster with the ThrA-like ACT 1 domains (ACT_AKi-HSDH-ThrA-like_1) which includes the threonine-sensitive archaeal Methanococcus jannaschii aspartokinase ACT 1 domain. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=20.17 E-value=2.1e+02 Score=17.15 Aligned_cols=47 Identities=13% Similarity=0.034 Sum_probs=31.0
Q ss_pred HHHHHHHHhccCEEEECCcccCCCCcEEEEeecCHHHHHHHHHHHHHHH
Q 047983 178 TEFALKLAKEESIIVLPGITVGLKDWLRITFAVEPSAFEIGLGRMKAFY 226 (233)
Q Consensus 178 ~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~~~~~l~~~~~~l~~~l 226 (233)
...+...|.+.||.+.--+. +. .-.++++..+.++.+++.++|.+.+
T Consensus 18 ~~~i~~~L~~~~I~v~~i~q-~~-s~~~isf~i~~~~~~~~~~~Lh~~~ 64 (66)
T cd04924 18 AGRVFGALGKAGINVIMISQ-GS-SEYNISFVVAEDDGWAAVKAVHDEF 64 (66)
T ss_pred HHHHHHHHHHCCCCEEEEEe-cC-ccceEEEEEeHHHHHHHHHHHHHHh
Confidence 44566777888877632111 11 2278888888888899988887654
Done!