Query 047983
Match_columns 233
No_of_seqs 101 out of 1291
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 08:29:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047983.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047983hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dyd_A Tyrosine aminotransfera 100.0 9.9E-29 3.4E-33 217.2 19.9 211 1-230 214-425 (427)
2 2r2n_A Kynurenine/alpha-aminoa 100.0 6.8E-28 2.3E-32 211.7 19.0 199 2-229 215-424 (425)
3 3aow_A Putative uncharacterize 100.0 2.8E-27 9.5E-32 209.5 19.5 199 2-231 241-447 (448)
4 1bw0_A TAT, protein (tyrosine 100.0 4.8E-27 1.6E-31 205.1 20.5 210 1-231 200-415 (416)
5 3ihj_A Alanine aminotransferas 100.0 2.2E-27 7.7E-32 212.8 17.1 203 2-231 259-495 (498)
6 1b5p_A Protein (aspartate amin 99.9 3.5E-27 1.2E-31 204.4 16.1 194 2-227 188-383 (385)
7 3tcm_A Alanine aminotransferas 99.9 8.5E-27 2.9E-31 209.2 18.0 203 2-231 261-496 (500)
8 3qgu_A LL-diaminopimelate amin 99.9 1.5E-26 5.2E-31 204.1 17.9 205 2-231 233-442 (449)
9 3ei9_A LL-diaminopimelate amin 99.9 3.9E-26 1.3E-30 200.5 16.4 200 2-229 222-428 (432)
10 1j32_A Aspartate aminotransfer 99.9 8.4E-26 2.9E-30 195.4 17.4 199 2-229 187-387 (388)
11 3nra_A Aspartate aminotransfer 99.9 8E-26 2.7E-30 196.4 16.6 199 2-230 203-406 (407)
12 3h14_A Aminotransferase, class 99.9 2.3E-25 7.9E-30 193.0 18.7 198 2-232 185-385 (391)
13 3fdb_A Beta C-S lyase, putativ 99.9 4.4E-26 1.5E-30 196.2 12.8 198 2-228 174-375 (377)
14 3fvs_A Kynurenine--oxoglutarat 99.9 3.4E-26 1.2E-30 199.9 12.2 203 1-228 197-421 (422)
15 1c7n_A Cystalysin; transferase 99.9 4E-25 1.4E-29 191.8 18.6 201 1-231 187-395 (399)
16 2x5d_A Probable aminotransfera 99.9 2.5E-25 8.5E-30 194.3 17.2 201 2-230 196-399 (412)
17 3b46_A Aminotransferase BNA3; 99.9 5.5E-26 1.9E-30 200.9 13.1 198 1-224 224-442 (447)
18 1gd9_A Aspartate aminotransfer 99.9 4.2E-25 1.4E-29 191.1 18.4 201 1-230 183-387 (389)
19 1vp4_A Aminotransferase, putat 99.9 2.1E-25 7.1E-30 195.7 16.6 200 2-232 212-421 (425)
20 3dzz_A Putative pyridoxal 5'-p 99.9 2.8E-25 9.6E-30 191.8 17.0 200 2-229 184-389 (391)
21 3e2y_A Kynurenine-oxoglutarate 99.9 1.2E-25 4E-30 195.7 14.3 196 2-224 191-408 (410)
22 3piu_A 1-aminocyclopropane-1-c 99.9 5.9E-25 2E-29 193.3 18.2 202 2-230 215-433 (435)
23 2o1b_A Aminotransferase, class 99.9 2E-25 6.9E-30 194.7 15.1 196 2-229 205-403 (404)
24 3kax_A Aminotransferase, class 99.9 5.3E-25 1.8E-29 189.6 17.2 195 2-226 180-382 (383)
25 3op7_A Aminotransferase class 99.9 1.8E-25 6.1E-30 192.5 14.1 196 2-231 178-373 (375)
26 3jtx_A Aminotransferase; NP_28 99.9 3.6E-25 1.2E-29 191.7 15.9 191 2-226 192-395 (396)
27 2zyj_A Alpha-aminodipate amino 99.9 1E-24 3.5E-29 189.4 18.2 198 2-230 187-394 (397)
28 4dq6_A Putative pyridoxal phos 99.9 5.9E-25 2E-29 189.8 16.2 195 2-226 188-390 (391)
29 3asa_A LL-diaminopimelate amin 99.9 3.4E-25 1.2E-29 192.8 14.2 199 2-230 187-394 (400)
30 2zc0_A Alanine glyoxylate tran 99.9 1.3E-24 4.5E-29 189.0 17.9 200 2-231 199-406 (407)
31 3l8a_A METC, putative aminotra 99.9 4.7E-25 1.6E-29 193.2 14.7 196 2-227 218-420 (421)
32 3k7y_A Aspartate aminotransfer 99.9 4.2E-25 1.4E-29 193.3 14.3 188 2-228 198-404 (405)
33 2z61_A Probable aspartate amin 99.9 2.4E-24 8.2E-29 185.3 18.6 192 3-227 175-369 (370)
34 2o0r_A RV0858C (N-succinyldiam 99.9 6.3E-25 2.1E-29 191.7 15.0 201 1-230 183-397 (411)
35 1u08_A Hypothetical aminotrans 99.9 2.9E-25 1E-29 192.0 12.8 194 2-224 187-385 (386)
36 2dou_A Probable N-succinyldiam 99.9 1.1E-24 3.8E-29 187.7 16.1 191 2-226 182-375 (376)
37 1yiz_A Kynurenine aminotransfe 99.9 4.2E-25 1.4E-29 193.6 13.0 202 1-227 205-427 (429)
38 3ppl_A Aspartate aminotransfer 99.9 4.7E-25 1.6E-29 193.5 13.2 198 2-231 205-422 (427)
39 3d6k_A Putative aminotransfera 99.9 1.2E-24 4.1E-29 190.8 14.7 198 2-231 203-420 (422)
40 1iay_A ACC synthase 2, 1-amino 99.9 3.1E-24 1.1E-28 188.2 17.2 201 2-229 212-427 (428)
41 3ele_A Amino transferase; RER0 99.9 4.1E-24 1.4E-28 185.3 17.7 193 2-230 196-397 (398)
42 3ezs_A Aminotransferase ASPB; 99.9 1.2E-24 4.1E-29 187.2 14.0 188 2-229 178-375 (376)
43 1d2f_A MALY protein; aminotran 99.9 6.5E-24 2.2E-28 183.8 18.6 195 2-229 186-389 (390)
44 1xi9_A Putative transaminase; 99.9 4.4E-24 1.5E-28 186.0 17.0 200 2-230 198-404 (406)
45 1o4s_A Aspartate aminotransfer 99.9 4.3E-24 1.5E-28 185.2 16.4 190 1-227 197-387 (389)
46 2zy4_A L-aspartate beta-decarb 99.9 2.4E-24 8.2E-29 195.1 15.2 208 2-230 269-523 (546)
47 3g7q_A Valine-pyruvate aminotr 99.9 1.1E-23 3.7E-28 183.6 18.4 198 2-231 204-415 (417)
48 1v2d_A Glutamine aminotransfer 99.9 2.8E-24 9.5E-29 185.5 13.5 193 2-231 176-373 (381)
49 3f6t_A Aspartate aminotransfer 99.9 3.5E-24 1.2E-28 193.6 14.2 211 2-231 268-527 (533)
50 3b1d_A Betac-S lyase; HET: PLP 99.8 3.6E-26 1.2E-30 198.4 0.0 199 1-227 187-391 (392)
51 3ez1_A Aminotransferase MOCR f 99.9 7.9E-24 2.7E-28 185.2 14.8 197 2-230 197-416 (423)
52 2x5f_A Aspartate_tyrosine_phen 99.9 1.2E-23 4.1E-28 184.5 14.7 193 2-229 213-429 (430)
53 2gb3_A Aspartate aminotransfer 99.9 1E-22 3.5E-27 177.6 20.1 194 2-231 198-404 (409)
54 3bwn_A AT1G70560, L-tryptophan 99.9 3.2E-24 1.1E-28 186.6 9.8 180 10-229 182-387 (391)
55 3rq1_A Aminotransferase class 99.9 3.7E-23 1.3E-27 180.7 15.0 191 2-230 204-416 (418)
56 3g0t_A Putative aminotransfera 99.9 6.4E-23 2.2E-27 179.9 16.3 205 2-228 206-436 (437)
57 3if2_A Aminotransferase; YP_26 99.9 3E-22 1E-26 176.2 18.8 200 2-232 230-443 (444)
58 4h51_A Aspartate aminotransfer 99.9 7.3E-23 2.5E-27 179.7 14.5 193 1-231 213-419 (420)
59 3t18_A Aminotransferase class 99.9 1E-22 3.5E-27 177.6 14.5 189 2-231 203-412 (413)
60 1fg7_A Histidinol phosphate am 99.9 3.6E-22 1.2E-26 171.3 16.9 181 2-224 170-353 (356)
61 3ffh_A Histidinol-phosphate am 99.9 6.5E-22 2.2E-26 169.5 17.7 184 2-225 176-362 (363)
62 1lc5_A COBD, L-threonine-O-3-p 99.9 4.5E-22 1.6E-26 170.7 16.5 188 2-230 170-361 (364)
63 4f4e_A Aromatic-amino-acid ami 99.9 1.2E-22 4.2E-27 177.8 12.9 187 2-226 219-419 (420)
64 3fsl_A Aromatic-amino-acid ami 99.9 1.1E-22 3.7E-27 176.2 12.1 186 2-225 197-396 (397)
65 4eu1_A Mitochondrial aspartate 99.9 1.3E-22 4.4E-27 176.9 11.5 186 2-226 207-408 (409)
66 3ftb_A Histidinol-phosphate am 99.9 1.8E-21 6.2E-26 166.3 17.6 185 2-225 168-357 (361)
67 1ajs_A Aspartate aminotransfer 99.9 3E-22 1E-26 174.4 13.0 187 2-228 207-410 (412)
68 3meb_A Aspartate aminotransfer 99.9 2.1E-22 7.2E-27 178.1 12.0 191 2-230 226-445 (448)
69 3ly1_A Putative histidinol-pho 99.9 1.3E-21 4.3E-26 167.0 16.2 186 2-228 162-351 (354)
70 7aat_A Aspartate aminotransfer 99.9 2.8E-22 9.7E-27 174.0 12.1 187 2-226 199-400 (401)
71 1yaa_A Aspartate aminotransfer 99.9 3.6E-22 1.2E-26 174.1 10.4 188 2-229 200-411 (412)
72 3euc_A Histidinol-phosphate am 99.9 5.9E-21 2E-25 163.7 17.8 180 2-226 181-365 (367)
73 3get_A Histidinol-phosphate am 99.9 3.1E-21 1.1E-25 165.4 14.9 185 2-226 174-364 (365)
74 3fkd_A L-threonine-O-3-phospha 99.9 1.5E-21 5.2E-26 166.5 12.4 191 2-231 150-344 (350)
75 3hdo_A Histidinol-phosphate am 99.9 6.9E-21 2.3E-25 163.1 16.5 187 1-230 169-356 (360)
76 2q7w_A Aspartate aminotransfer 99.9 4.1E-22 1.4E-26 172.5 7.7 185 2-225 196-395 (396)
77 3p1t_A Putative histidinol-pho 99.9 1.5E-20 5.2E-25 159.1 17.1 179 1-226 155-334 (337)
78 2hox_A ALLIIN lyase 1; cystein 99.8 2.5E-21 8.5E-26 170.4 10.1 182 11-228 219-424 (427)
79 2ay1_A Aroat, aromatic amino a 99.8 2.4E-21 8.3E-26 167.6 8.9 185 2-225 193-392 (394)
80 3a2b_A Serine palmitoyltransfe 99.8 2.9E-20 9.9E-25 161.2 14.1 194 1-230 193-393 (398)
81 3cq5_A Histidinol-phosphate am 99.8 1.7E-19 5.7E-24 155.1 16.8 181 1-227 184-366 (369)
82 1uu1_A Histidinol-phosphate am 99.8 4.1E-19 1.4E-23 150.8 14.2 175 2-225 159-334 (335)
83 2dr1_A PH1308 protein, 386AA l 99.8 6.6E-18 2.2E-22 145.1 18.4 202 1-230 166-380 (386)
84 1vjo_A Alanine--glyoxylate ami 99.8 7.2E-18 2.5E-22 145.6 18.0 198 1-226 179-392 (393)
85 2w8t_A SPT, serine palmitoyltr 99.8 2.8E-18 9.7E-23 150.5 15.5 197 1-231 214-417 (427)
86 4ffc_A 4-aminobutyrate aminotr 99.8 2.5E-19 8.7E-24 158.6 8.3 199 2-232 250-452 (453)
87 3tqx_A 2-amino-3-ketobutyrate 99.8 4.1E-18 1.4E-22 147.2 15.2 195 1-229 195-396 (399)
88 1sff_A 4-aminobutyrate aminotr 99.8 7.3E-19 2.5E-23 153.5 10.4 194 1-230 223-425 (426)
89 3i4j_A Aminotransferase, class 99.8 4.1E-18 1.4E-22 149.4 14.6 195 2-229 216-428 (430)
90 2dkj_A Serine hydroxymethyltra 99.8 8.8E-18 3E-22 145.6 16.2 191 1-228 181-387 (407)
91 1fc4_A 2-amino-3-ketobutyrate 99.8 5.4E-18 1.8E-22 146.9 14.5 193 1-230 197-398 (401)
92 3oks_A 4-aminobutyrate transam 99.8 1.8E-18 6.3E-23 152.9 11.3 195 2-228 252-450 (451)
93 2bwn_A 5-aminolevulinate synth 99.8 4.9E-18 1.7E-22 147.3 12.9 195 1-228 198-399 (401)
94 3dxv_A Alpha-amino-epsilon-cap 99.8 3.5E-18 1.2E-22 150.2 11.2 193 2-230 226-426 (439)
95 3gju_A Putative aminotransfera 99.8 7.2E-18 2.5E-22 149.4 13.2 211 2-232 246-459 (460)
96 3kki_A CAI-1 autoinducer synth 99.7 4.3E-17 1.5E-21 141.8 17.1 191 1-229 206-404 (409)
97 1kmj_A Selenocysteine lyase; p 99.7 3.7E-17 1.3E-21 141.2 16.3 199 1-229 184-405 (406)
98 3n5m_A Adenosylmethionine-8-am 99.7 7.4E-18 2.5E-22 148.8 11.9 203 2-228 240-451 (452)
99 3nx3_A Acoat, acetylornithine 99.7 8.1E-18 2.8E-22 145.7 10.0 186 1-228 203-394 (395)
100 4a6r_A Omega transaminase; tra 99.7 3.8E-17 1.3E-21 144.7 14.4 204 1-230 243-450 (459)
101 1eg5_A Aminotransferase; PLP-d 99.7 4.6E-17 1.6E-21 139.6 14.5 190 1-230 159-377 (384)
102 1bs0_A Protein (8-amino-7-oxon 99.7 2.1E-17 7.3E-22 142.3 12.2 187 1-225 188-383 (384)
103 1zod_A DGD, 2,2-dialkylglycine 99.7 1.6E-17 5.3E-22 145.7 11.5 192 1-229 227-432 (433)
104 2huf_A Alanine glyoxylate amin 99.7 4.3E-16 1.5E-20 134.3 19.3 203 1-230 164-384 (393)
105 1t3i_A Probable cysteine desul 99.7 1.4E-16 4.7E-21 138.4 16.1 201 1-230 189-414 (420)
106 2eo5_A 419AA long hypothetical 99.7 5.8E-17 2E-21 141.8 13.6 179 2-229 237-418 (419)
107 2vi8_A Serine hydroxymethyltra 99.7 7.2E-17 2.5E-21 139.7 13.7 190 1-229 181-387 (405)
108 3kgw_A Alanine-glyoxylate amin 99.7 6.3E-16 2.2E-20 132.9 19.0 205 1-232 168-391 (393)
109 3l44_A Glutamate-1-semialdehyd 99.7 2.5E-17 8.4E-22 144.6 9.9 202 2-232 227-433 (434)
110 4adb_A Succinylornithine trans 99.7 4.7E-17 1.6E-21 141.0 11.4 192 1-231 207-402 (406)
111 2ord_A Acoat, acetylornithine 99.7 1.7E-17 5.7E-22 143.8 8.6 184 1-227 207-395 (397)
112 2yrr_A Aminotransferase, class 99.7 3.2E-16 1.1E-20 132.7 16.1 200 1-228 144-352 (353)
113 3ecd_A Serine hydroxymethyltra 99.7 2.2E-16 7.4E-21 137.4 15.4 192 1-229 190-397 (425)
114 2eh6_A Acoat, acetylornithine 99.7 6.9E-17 2.4E-21 138.6 11.8 177 1-225 196-374 (375)
115 2pb2_A Acetylornithine/succiny 99.7 6.5E-17 2.2E-21 141.7 10.7 187 2-229 226-418 (420)
116 2z9v_A Aspartate aminotransfer 99.7 1.4E-15 4.9E-20 131.0 19.0 202 1-230 154-372 (392)
117 2aeu_A Hypothetical protein MJ 99.7 8.5E-17 2.9E-21 139.0 11.2 198 1-230 162-372 (374)
118 3k28_A Glutamate-1-semialdehyd 99.7 3.2E-17 1.1E-21 143.8 8.5 198 2-229 225-427 (429)
119 1iug_A Putative aspartate amin 99.7 7.1E-16 2.4E-20 130.8 16.6 200 1-230 141-349 (352)
120 3dod_A Adenosylmethionine-8-am 99.7 1.2E-16 4.2E-21 140.9 12.3 201 2-231 236-445 (448)
121 1m32_A 2-aminoethylphosphonate 99.7 4.8E-16 1.6E-20 132.3 15.4 200 1-228 151-364 (366)
122 1vef_A Acetylornithine/acetyl- 99.7 1.1E-16 3.6E-21 138.6 11.2 184 1-226 209-394 (395)
123 3ruy_A Ornithine aminotransfer 99.7 1.1E-16 3.9E-21 138.2 11.3 180 2-226 207-391 (392)
124 3f9t_A TDC, L-tyrosine decarbo 99.7 1E-15 3.5E-20 131.5 17.0 189 1-227 191-396 (397)
125 1e5e_A MGL, methionine gamma-l 99.7 7.5E-16 2.6E-20 134.4 15.6 178 1-229 167-395 (404)
126 3hmu_A Aminotransferase, class 99.7 2.9E-16 1E-20 139.7 12.7 195 2-230 248-453 (472)
127 1z7d_A Ornithine aminotransfer 99.7 2.3E-16 7.8E-21 138.8 11.3 188 1-230 236-430 (433)
128 3zrp_A Serine-pyruvate aminotr 99.7 3.1E-15 1.1E-19 128.2 17.9 200 1-230 147-364 (384)
129 4eb5_A Probable cysteine desul 99.7 2E-15 6.8E-20 129.4 16.6 193 1-231 158-375 (382)
130 3fq8_A Glutamate-1-semialdehyd 99.7 1.1E-16 3.7E-21 140.2 8.7 192 2-228 224-426 (427)
131 1s0a_A Adenosylmethionine-8-am 99.7 4.3E-16 1.5E-20 136.4 12.3 182 1-229 229-424 (429)
132 2ch1_A 3-hydroxykynurenine tra 99.7 4.3E-15 1.5E-19 128.1 18.3 204 1-230 163-384 (396)
133 3lws_A Aromatic amino acid bet 99.7 2E-16 6.9E-21 134.9 9.7 188 1-226 159-356 (357)
134 3i5t_A Aminotransferase; pyrid 99.7 5.6E-16 1.9E-20 138.0 12.7 193 2-231 246-456 (476)
135 4e77_A Glutamate-1-semialdehyd 99.7 1.8E-16 6E-21 139.0 8.6 196 2-228 225-428 (429)
136 2e7j_A SEP-tRNA:Cys-tRNA synth 99.7 9.5E-17 3.2E-21 137.3 6.5 183 1-229 167-370 (371)
137 3pj0_A LMO0305 protein; struct 99.7 6.2E-16 2.1E-20 131.9 11.5 188 2-225 162-358 (359)
138 3nnk_A Ureidoglycine-glyoxylat 99.7 1.3E-14 4.6E-19 125.5 20.1 203 1-230 158-391 (411)
139 3h7f_A Serine hydroxymethyltra 99.7 2.3E-15 8E-20 132.8 15.5 194 1-229 203-414 (447)
140 4hvk_A Probable cysteine desul 99.6 3.1E-15 1.1E-19 127.8 15.7 192 1-231 158-375 (382)
141 3n0l_A Serine hydroxymethyltra 99.6 2.6E-15 9E-20 130.4 15.4 192 1-229 182-389 (417)
142 2oat_A Ornithine aminotransfer 99.6 8.8E-16 3E-20 135.3 12.4 187 2-228 248-438 (439)
143 3lvm_A Cysteine desulfurase; s 99.6 5.7E-15 2E-19 128.5 17.3 190 1-231 183-401 (423)
144 3gbx_A Serine hydroxymethyltra 99.6 3.8E-15 1.3E-19 129.3 15.7 193 1-229 187-396 (420)
145 1elu_A L-cysteine/L-cystine C- 99.6 2.3E-15 7.7E-20 129.4 13.8 193 1-224 174-387 (390)
146 3a8u_X Omega-amino acid--pyruv 99.6 7.6E-16 2.6E-20 135.7 11.0 187 1-229 243-447 (449)
147 3ffr_A Phosphoserine aminotran 99.6 5.5E-15 1.9E-19 125.7 15.6 196 1-226 150-361 (362)
148 3isl_A Purine catabolism prote 99.6 2.4E-14 8.3E-19 124.1 18.8 202 1-230 156-391 (416)
149 2epj_A Glutamate-1-semialdehyd 99.6 4.9E-16 1.7E-20 136.3 7.9 196 1-230 227-432 (434)
150 1w23_A Phosphoserine aminotran 99.6 5E-15 1.7E-19 126.2 13.3 191 6-228 161-359 (360)
151 3tfu_A Adenosylmethionine-8-am 99.6 2.5E-15 8.4E-20 133.2 11.3 183 2-230 259-454 (457)
152 1v72_A Aldolase; PLP-dependent 99.6 4.2E-15 1.4E-19 126.2 11.9 183 1-229 163-353 (356)
153 2cjg_A L-lysine-epsilon aminot 99.6 4E-15 1.4E-19 131.4 12.0 185 1-229 255-448 (449)
154 1rv3_A Serine hydroxymethyltra 99.6 2.2E-14 7.5E-19 127.9 16.5 200 1-228 211-430 (483)
155 3f0h_A Aminotransferase; RER07 99.6 2.5E-14 8.7E-19 122.5 16.3 199 1-228 164-373 (376)
156 2cy8_A D-phgat, D-phenylglycin 99.6 2.4E-15 8.4E-20 132.6 10.2 193 1-230 225-436 (453)
157 2e7u_A Glutamate-1-semialdehyd 99.6 1.5E-15 5.2E-20 132.8 7.5 187 2-225 224-423 (424)
158 2bkw_A Alanine-glyoxylate amin 99.6 2E-14 6.7E-19 123.3 14.1 197 1-228 157-383 (385)
159 2fyf_A PSAT, phosphoserine ami 99.6 2.4E-14 8.1E-19 124.1 14.5 191 10-228 191-397 (398)
160 3cai_A Possible aminotransfera 99.6 2.2E-14 7.5E-19 124.2 14.0 189 1-224 185-404 (406)
161 2c0r_A PSAT, phosphoserine ami 99.6 6.5E-14 2.2E-18 119.6 15.1 189 10-229 166-361 (362)
162 3vax_A Putative uncharacterize 99.6 1.5E-14 5.1E-19 124.9 11.1 192 1-228 179-399 (400)
163 1wyu_B Glycine dehydrogenase s 99.6 3.2E-14 1.1E-18 126.5 13.5 199 1-228 223-440 (474)
164 2oga_A Transaminase; PLP-depen 99.6 2.5E-14 8.4E-19 124.1 11.8 191 1-230 168-397 (399)
165 1cs1_A CGS, protein (cystathio 99.5 1.5E-13 5.2E-18 118.7 16.2 181 1-230 157-384 (386)
166 2ez2_A Beta-tyrosinase, tyrosi 99.5 4E-14 1.4E-18 124.7 12.3 196 1-230 198-432 (456)
167 1qz9_A Kynureninase; kynurenin 99.5 1.2E-13 4E-18 119.9 14.9 195 1-229 185-402 (416)
168 3mad_A Sphingosine-1-phosphate 99.5 3.5E-13 1.2E-17 120.8 17.8 204 1-231 259-471 (514)
169 2po3_A 4-dehydrase; external a 99.5 3.4E-13 1.2E-17 117.9 16.3 194 1-230 155-387 (424)
170 2rfv_A Methionine gamma-lyase; 99.5 8.5E-14 2.9E-18 120.8 11.3 58 1-66 169-227 (398)
171 3mc6_A Sphingosine-1-phosphate 99.5 4.1E-13 1.4E-17 119.7 15.9 202 1-231 226-439 (497)
172 1b9h_A AHBA synthase, protein 99.5 1.3E-13 4.4E-18 118.8 12.0 193 1-228 143-387 (388)
173 1ibj_A CBL, cystathionine beta 99.5 1.8E-13 6.2E-18 121.5 13.1 58 1-66 237-295 (464)
174 1mdo_A ARNB aminotransferase; 99.5 2.2E-13 7.4E-18 117.4 12.5 204 1-230 144-387 (393)
175 1svv_A Threonine aldolase; str 99.5 2.3E-13 7.9E-18 115.4 11.1 187 2-229 168-358 (359)
176 2yky_A Beta-transaminase; tran 99.2 5.6E-15 1.9E-19 131.1 0.0 194 1-230 257-461 (465)
177 1js3_A DDC;, DOPA decarboxylas 99.4 1.1E-12 3.9E-17 116.6 13.9 211 1-231 255-476 (486)
178 1jg8_A L-ALLO-threonine aldola 99.4 2.2E-13 7.5E-18 115.5 8.6 183 2-229 157-346 (347)
179 2oqx_A Tryptophanase; lyase, p 99.4 1.8E-13 6.1E-18 120.8 8.2 196 2-230 208-443 (467)
180 2a7v_A Serine hydroxymethyltra 99.4 5.1E-12 1.7E-16 112.8 17.3 197 1-229 221-441 (490)
181 1gc0_A Methionine gamma-lyase; 99.4 2.9E-12 9.7E-17 111.2 14.9 58 1-66 170-228 (398)
182 2qma_A Diaminobutyrate-pyruvat 99.4 1.8E-12 6.2E-17 115.7 13.9 210 1-229 278-496 (497)
183 1pff_A Methionine gamma-lyase; 99.4 1.8E-12 6.1E-17 109.3 12.9 58 1-66 103-162 (331)
184 1ax4_A Tryptophanase; tryptoph 99.4 2.3E-12 7.8E-17 113.7 14.1 195 2-230 208-442 (467)
185 3ndn_A O-succinylhomoserine su 99.4 1.4E-12 4.7E-17 114.2 12.5 185 1-225 186-412 (414)
186 2c81_A Glutamine-2-deoxy-scyll 99.4 1.4E-12 4.9E-17 113.6 12.5 203 1-232 147-417 (418)
187 3a9z_A Selenocysteine lyase; P 99.4 3.6E-12 1.2E-16 111.3 13.9 197 1-231 195-430 (432)
188 2fnu_A Aminotransferase; prote 99.4 2.4E-12 8.1E-17 110.0 12.0 192 1-229 138-372 (375)
189 3uwc_A Nucleotide-sugar aminot 99.4 1.3E-12 4.6E-17 111.7 9.9 191 1-229 142-371 (374)
190 1ohv_A 4-aminobutyrate aminotr 99.4 1E-12 3.4E-17 116.9 9.1 183 1-229 282-471 (472)
191 3ke3_A Putative serine-pyruvat 99.4 1.8E-11 6E-16 105.5 15.3 200 2-230 159-377 (379)
192 3acz_A Methionine gamma-lyase; 99.4 1.5E-11 5E-16 106.6 14.6 58 1-66 164-222 (389)
193 3e9k_A Kynureninase; kynurenin 99.3 4.2E-12 1.4E-16 112.2 11.1 197 1-230 234-462 (465)
194 2x3l_A ORN/Lys/Arg decarboxyla 99.3 3.7E-12 1.3E-16 112.4 10.4 181 1-229 165-353 (446)
195 2okj_A Glutamate decarboxylase 99.3 2.1E-11 7.2E-16 109.0 15.1 208 1-228 265-501 (504)
196 3cog_A Cystathionine gamma-lya 99.3 8.6E-12 2.9E-16 108.6 12.0 58 1-66 171-230 (403)
197 2dgk_A GAD-beta, GADB, glutama 99.3 5.6E-11 1.9E-15 104.7 17.0 207 1-230 207-435 (452)
198 2cb1_A O-acetyl homoserine sul 99.3 4.3E-11 1.5E-15 104.3 15.4 59 1-66 160-218 (412)
199 1qgn_A Protein (cystathionine 99.3 2.3E-11 7.9E-16 107.4 13.6 183 1-228 220-444 (445)
200 1wyu_A Glycine dehydrogenase ( 99.3 3E-11 1E-15 106.0 14.2 194 1-226 215-437 (438)
201 3qhx_A Cystathionine gamma-syn 99.3 3.1E-11 1E-15 104.7 13.8 182 1-226 171-391 (392)
202 1n8p_A Cystathionine gamma-lya 99.3 3E-11 1E-15 104.8 12.9 112 1-140 158-276 (393)
203 3frk_A QDTB; aminotransferase, 99.3 1.7E-11 5.9E-16 105.0 10.4 191 1-230 141-369 (373)
204 3dr4_A Putative perosamine syn 99.3 3.1E-11 1.1E-15 104.0 11.2 189 1-226 161-390 (391)
205 3hbx_A GAD 1, glutamate decarb 99.2 3.2E-10 1.1E-14 101.4 16.2 209 1-231 222-446 (502)
206 3ri6_A O-acetylhomoserine sulf 99.2 1.7E-10 5.7E-15 101.4 14.1 191 1-218 187-424 (430)
207 1o69_A Aminotransferase; struc 99.2 2.7E-10 9.4E-15 98.4 13.3 191 1-228 139-386 (394)
208 3nmy_A Xometc, cystathionine g 99.2 2.6E-10 8.9E-15 99.2 12.3 115 1-142 172-289 (400)
209 4atq_A 4-aminobutyrate transam 99.2 1.8E-10 6E-15 102.0 11.1 197 2-229 251-455 (456)
210 3nyt_A Aminotransferase WBPE; 99.2 1.6E-10 5.3E-15 98.9 10.5 184 1-226 140-361 (367)
211 3k40_A Aromatic-L-amino-acid d 99.1 6.1E-10 2.1E-14 99.0 14.2 212 1-233 254-475 (475)
212 2fq6_A Cystathionine beta-lyas 99.1 7.7E-10 2.6E-14 96.8 14.0 112 1-140 187-302 (415)
213 2z67_A O-phosphoseryl-tRNA(SEC 99.1 8.4E-11 2.9E-15 103.9 7.8 188 1-226 251-455 (456)
214 4e1o_A HDC, histidine decarbox 99.1 5.8E-10 2E-14 99.2 12.8 208 1-230 261-479 (481)
215 4e3q_A Pyruvate transaminase; 99.1 1.5E-09 5E-14 96.5 15.0 198 2-231 261-470 (473)
216 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.1 3E-09 1E-13 93.2 16.9 59 1-66 175-234 (437)
217 1c4k_A Protein (ornithine deca 99.1 2.7E-09 9.1E-14 99.4 17.2 208 1-230 300-567 (730)
218 4ao9_A Beta-phenylalanine amin 99.1 7.3E-10 2.5E-14 97.8 12.5 197 2-231 245-448 (454)
219 2jis_A Cysteine sulfinic acid 99.1 2.9E-09 1E-13 95.4 16.4 208 1-227 279-513 (515)
220 4a0g_A Adenosylmethionine-8-am 99.1 2.9E-11 9.9E-16 114.1 2.4 197 2-229 620-828 (831)
221 3vp6_A Glutamate decarboxylase 99.1 6.5E-09 2.2E-13 93.2 17.0 212 1-229 268-505 (511)
222 2vyc_A Biodegradative arginine 99.0 2E-09 6.7E-14 100.8 13.7 64 1-66 331-401 (755)
223 2ctz_A O-acetyl-L-homoserine s 99.0 3.8E-09 1.3E-13 92.3 13.3 58 1-65 164-221 (421)
224 3ju7_A Putative PLP-dependent 98.7 7.1E-08 2.4E-12 83.1 11.3 191 1-229 146-375 (377)
225 3b8x_A WBDK, pyridoxamine 5-ph 98.7 2E-07 6.9E-12 80.0 13.7 95 115-222 266-389 (390)
226 3hl2_A O-phosphoseryl-tRNA(SEC 98.6 7.3E-07 2.5E-11 78.2 14.0 202 1-232 236-464 (501)
227 3i16_A Aluminum resistance pro 98.6 9E-08 3.1E-12 83.9 8.2 114 1-140 200-320 (427)
228 3n75_A LDC, lysine decarboxyla 98.6 7.6E-07 2.6E-11 82.6 14.2 201 1-229 316-560 (715)
229 3e77_A Phosphoserine aminotran 98.5 3.2E-06 1.1E-10 72.9 16.1 191 6-229 172-375 (377)
230 3jzl_A Putative cystathionine 98.5 3.6E-07 1.2E-11 79.7 10.0 112 1-140 183-303 (409)
231 3hvy_A Cystathionine beta-lyas 98.5 2.5E-07 8.7E-12 81.0 8.2 113 1-140 200-320 (427)
232 3qm2_A Phosphoserine aminotran 98.4 2.6E-05 8.8E-10 67.4 18.9 189 10-229 191-385 (386)
233 3ht4_A Aluminum resistance pro 98.4 5.6E-07 1.9E-11 78.9 6.7 110 1-139 189-308 (431)
234 3ou5_A Serine hydroxymethyltra 98.3 4.1E-05 1.4E-09 67.0 17.8 196 2-227 222-439 (490)
235 3m5u_A Phosphoserine aminotran 98.3 2.9E-05 9.9E-10 66.4 15.4 187 10-229 163-360 (361)
236 3bc8_A O-phosphoseryl-tRNA(SEC 98.0 6.3E-05 2.1E-09 66.1 11.4 201 1-232 218-446 (450)
237 3bzy_B ESCU; auto cleavage pro 58.0 4.1 0.00014 26.7 1.4 24 1-24 30-53 (83)
238 2vt1_B Surface presentation of 51.8 5.9 0.0002 26.5 1.4 22 1-22 30-51 (93)
239 3t7y_A YOP proteins translocat 50.8 5.9 0.0002 26.7 1.3 22 1-22 45-66 (97)
240 3c01_E Surface presentation of 49.6 6.4 0.00022 26.6 1.3 21 2-22 31-51 (98)
241 2a1v_A Conserved hypothetical 48.4 72 0.0025 22.8 7.7 51 177-227 64-116 (144)
242 3b1s_B Flagellar biosynthetic 51.0 4.5 0.00015 26.7 0.0 25 1-25 30-54 (87)
243 2jli_A YSCU, YOP proteins tran 36.3 13 0.00046 26.1 1.3 24 2-25 75-98 (123)
244 3bzs_A ESCU; auto cleavage pro 35.6 14 0.00047 26.6 1.3 24 2-25 85-108 (137)
245 3b0z_B Flagellar biosynthetic 41.7 7.9 0.00027 26.9 0.0 25 1-25 30-54 (114)
246 2jlj_A YSCU, YOP proteins tran 33.9 15 0.00052 26.6 1.3 23 2-24 84-106 (144)
247 2fki_A Protein YJBR; NESG, GFT 30.9 1.3E+02 0.0045 20.7 7.1 50 177-227 53-104 (126)
248 2kfp_A Pspto_3016 protein; alp 24.3 73 0.0025 22.1 3.5 40 182-223 72-113 (125)
No 1
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=99.96 E-value=9.9e-29 Score=217.21 Aligned_cols=211 Identities=28% Similarity=0.576 Sum_probs=164.2
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|+++|++||+++|+||+|+++.+++..+.++..++...++++++|+||.|+++|+|+||+++++....+++ .+.
T Consensus 214 ~~i~~~~~~~~~~~i~Deay~~~~~~g~~~~~~~~~~~~~~vi~~~S~sK~~~~~G~riG~~~~~~~~~~~~~-~i~--- 289 (427)
T 3dyd_A 214 QKILAVAARQCVPILADEIYGDMVFSDCKYEPLATLSTDVPILSCGGLAKRWLVPGWRLGWILIHDRRDIFGN-EIR--- 289 (427)
T ss_dssp HHHHHHHHHTTCCEEEECTTTTCBCSSCCCCCGGGGCSSCCEEEEEESTTTSSCGGGCCEEEEEECSTTSSHH-HHH---
T ss_pred HHHHHHHHHCCCEEEEEcCchhhccCCCcCccHHHhCCCCcEEEEeeccccCCCcCcceEEEEecCcchhhHH-HHH---
Confidence 3789999999999999999999999887666777777777899999999999999999999999864222211 122
Q ss_pred hhhhHHhhhhhhhhccCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCC
Q 047983 81 SISLNMRMDDYLLLSESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSE 159 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~ 159 (233)
..+........++++.. .++...++....+++.+.++.++++++.+.+.|++++++.. ..|++|+|+|
T Consensus 290 -----~~l~~~~~~~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~-~~p~~g~~~~----- 358 (427)
T 3dyd_A 290 -----DGLVKLSQRILGPCTIVQGALKSILCRTPGEFYHNTLSFLKSNADLCYGALAAIPGLRP-VRPSGAMYLM----- 358 (427)
T ss_dssp -----HHHHHHHHHHCCSCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHSTTEEE-ECCSBTTEEE-----
T ss_pred -----HHHHHHHhccCCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhcCCCcee-cCCCeeEEEE-----
Confidence 33332221122333333 55556565445678899999999999999999999877764 6799999999
Q ss_pred CcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeecCHHHHHHHHHHHHHHHHHHh
Q 047983 160 DKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAVEPSAFEIGLGRMKAFYYRHA 230 (233)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~~~~~l~~~~~~l~~~l~~~~ 230 (233)
+.++....+...++.+++.++++++||.+.||+.|+..+++|++++.+++++++++++|.++++++.
T Consensus 359 ----~~l~~~~~~~~~~~~~~~~~l~~~~gV~v~~g~~~~~~~~iRis~~~~~e~i~~~l~~l~~~l~~~~ 425 (427)
T 3dyd_A 359 ----VGIEMEHFPEFENDVEFTERLVAEQSVHCLPATCFEYPNFIRVVITVPEVMMLEACSRIQEFCEQHY 425 (427)
T ss_dssp ----EEECGGGCTTCSSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEESCSCHHHHHHHHHHHHHHHHHHC
T ss_pred ----EecCHhhcCCCCCHHHHHHHHHHHCCEEEECCcccCCCCeEEEEECCCHHHHHHHHHHHHHHHHHhh
Confidence 6665433322234678888888889999999999998999999999999999999999999998875
No 2
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=99.96 E-value=6.8e-28 Score=211.66 Aligned_cols=199 Identities=18% Similarity=0.263 Sum_probs=152.8
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHS 81 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~ 81 (233)
+|+++|++||++||+||+|+++.|++..+.++..++.++++|+++|+||.|+ ||+|+||+++++ .+++. +
T Consensus 215 ~l~~~a~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~SK~~~-~GlRiG~~~~~~--~l~~~---l---- 284 (425)
T 2r2n_A 215 EIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKIIS-SGLRIGFLTGPK--PLIER---V---- 284 (425)
T ss_dssp HHHHHHHHTTCEEEEECTTGGGBSSSSCCCCTGGGCTTSCEEEEEESTTTTC-STTCCEEEEEEH--HHHHH---H----
T ss_pred HHHHHHHHcCCEEEEECCcccccCCCCCCCCccccCCCCCEEEEccchhhcc-CccceEEEecCH--HHHHH---H----
Confidence 7899999999999999999999998766667777776789999999999988 999999999987 34421 1
Q ss_pred hhhHHhhhhhhhhccCcchHHHHHHHHhhh----cHHHHHHHHHHHHHHHHHHHHHHhhc-CCCcccccCCCccEEEEEe
Q 047983 82 ISLNMRMDDYLLLSESVYTTVGAVPQILEK----TEEEFFSKITDILREAADICCDRLKE-IPCITCPKKPEGSMFVMYC 156 (233)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~g~~~~~~ 156 (233)
.........+.++..+ .++...++. ...++++++++.++++++.+.+.|++ ++++..+..|.+|+|+|
T Consensus 285 ----~~~~~~~~~~~~~~~q-~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~p~~g~~~~-- 357 (425)
T 2r2n_A 285 ----ILHIQVSTLHPSTFNQ-LMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLW-- 357 (425)
T ss_dssp ----HHHHHTTTCSSCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEECCCSBSSEEE--
T ss_pred ----HHHHHHhcCCCCHHHH-HHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEeCCCceEEEE--
Confidence 2222222333333333 444444443 23578999999999999999999988 66653236789999999
Q ss_pred cCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC-----CCcEEEEee-cCHHHHHHHHHHHHHHHHHH
Q 047983 157 GSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL-----KDWLRITFA-VEPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~-----~~~~Rl~~~-~~~~~l~~~~~~l~~~l~~~ 229 (233)
++++.. . ++.+++.+.|.++||.+.||+.|+. .+++|++++ .+++++++++++|.+++++.
T Consensus 358 -------~~~~~~----~-~~~~~~~~~l~~~gv~v~pg~~f~~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~~~ 424 (425)
T 2r2n_A 358 -------IKVKGI----N-DVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSSASPEQMDVAFQVLAQLIKES 424 (425)
T ss_dssp -------EEETTC----S-CCHHHHHTHHHHTTEECEEGGGGSSSTTSCCCEEEEECSSCCHHHHHHHHHHHHHHHHHH
T ss_pred -------EEeCCC----C-CHHHHHHHHHHHCCcEEechhhhcCCCCCCCCEEEEEeCCCCHHHHHHHHHHHHHHHHHh
Confidence 665421 1 3556667778899999999999974 479999998 59999999999999998753
No 3
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=99.95 E-value=2.8e-27 Score=209.53 Aligned_cols=199 Identities=22% Similarity=0.396 Sum_probs=153.6
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHS 81 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~ 81 (233)
+|+++|++||++||+||+|+++.+++..+.++..++..+++++++||||.++ ||+|+||+++++ ++++. +
T Consensus 241 ~i~~la~~~~~~lI~De~y~~~~~~g~~~~~~~~~~~~~~vi~~~S~SK~~~-~GlriG~v~~~~--~l~~~---l---- 310 (448)
T 3aow_A 241 YLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSKILA-PGFRIGWMVGDP--GIIRK---M---- 310 (448)
T ss_dssp HHHHHHHHHTCEEEEECSCTTCBCSSCCCCCTGGGCTTSCEEEEEESTTTTC-GGGCCEEEEECH--HHHHH---H----
T ss_pred HHHHHHHHcCCEEEEECCCccccCCCCCCcCHHhcCCCCCEEEEccchhhcc-ccccEEEEEeCH--HHHHH---H----
Confidence 7899999999999999999999998766667777777788999999999988 999999999986 44432 1
Q ss_pred hhhHHhhhhhhhhccCcchHHHHHHHHhhhc-HHHHHHHHHHHHHHHHHHHHHHhhc-CC-CcccccCCCccEEEEEecC
Q 047983 82 ISLNMRMDDYLLLSESVYTTVGAVPQILEKT-EEEFFSKITDILREAADICCDRLKE-IP-CITCPKKPEGSMFVMYCGS 158 (233)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~l~~~L~~-~~-~~~~~~~~~~g~~~~~~~~ 158 (233)
.......+++.++..+ .++..+++.. ..++++++++.++++++.+.+.|++ ++ ++. +..|.+|+|+|
T Consensus 311 ----~~~~~~~~~~~~~~~q-~a~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~g~~-~~~p~~g~~~~---- 380 (448)
T 3aow_A 311 ----EIAKQSTDLCTNVFGQ-VVAWRYVDGGYLEKHIPEIRKFYKPRRDAMLEALEEFMPEGVK-WTKPEGGMFIW---- 380 (448)
T ss_dssp ----HHHHHHHHSSCCHHHH-HHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCE-ECCCSBSSEEE----
T ss_pred ----HHHHHHhcCCCCHHHH-HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeE-EeCCCccEEEE----
Confidence 2222223333333333 4555555443 4678999999999999999999987 66 465 36789999999
Q ss_pred CCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC----CCcEEEEeec-CHHHHHHHHHHHHHHHHHHhh
Q 047983 159 EDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL----KDWLRITFAV-EPSAFEIGLGRMKAFYYRHAK 231 (233)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~----~~~~Rl~~~~-~~~~l~~~~~~l~~~l~~~~~ 231 (233)
++++. +. +..++..+++ ++||.+.||+.|+. .+++|++++. +++++++++++|.+++++..+
T Consensus 381 -----v~~~~----~~-~~~~l~~~l~-~~gV~v~pg~~f~~~~~~~~~iRls~~~~~~e~i~~~~~~L~~~l~~~~~ 447 (448)
T 3aow_A 381 -----VTLPD----GI-DSKKMLERAI-KKGVAYVPGEAFYAHRDVKNTMRLNFTYVDEDKIMEGIKRLAETIKEELK 447 (448)
T ss_dssp -----EECST----TC-CHHHHHHHHH-HTTEECEEGGGGSTTCCCCSEEEEECSSSCTHHHHHHHHHHHHHHHHHHC
T ss_pred -----EEcCC----CC-CHHHHHHHHH-HCCcEEEcchhhcCCCCCCCEEEEEeCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 66542 12 3555666655 55999999999963 5799999997 799999999999999987654
No 4
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=99.95 E-value=4.8e-27 Score=205.11 Aligned_cols=210 Identities=29% Similarity=0.488 Sum_probs=157.1
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCC----ccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccch
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNT----HFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGV 76 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~----~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~ 76 (233)
++|+++|++||++||+||+|.++.+++. .+.++..++..+++++++|+||.|+++|+|+||++++++..++++ +
T Consensus 200 ~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~Glr~G~~~~~~~~~~~~~--~ 277 (416)
T 1bw0_A 200 EDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAKNLVVPGWRLGWLLYVDPHGNGPS--F 277 (416)
T ss_dssp HHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSSCCSCCEEEEEESTTTTSCGGGCCEEEEEECTTCSCHH--H
T ss_pred HHHHHHHHHcCCEEEEEccccccccCCCCCCCCccCHHHccCCCcEEEEecchhhCCCCCceEEEEEeeCchhhHHH--H
Confidence 3689999999999999999999988775 445666566556799999999999999999999999873113321 2
Q ss_pred hhhhhhhhHHhhhhh--hhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEE
Q 047983 77 AFFHSISLNMRMDDY--LLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVM 154 (233)
Q Consensus 77 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~ 154 (233)
. ..+... ...+.++..+ .++...++....+++++.++.++++++.+.+.|++++++.. ..|.+|+|+|
T Consensus 278 ~--------~~~~~~~~~~~~~~~~~~-~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~-~~~~~~~~~~ 347 (416)
T 1bw0_A 278 L--------EGLKRVGMLVCGPCTVVQ-AALGEALLNTPQEHLDQIVAKIEESAMYLYNHIGECIGLAP-TMPRGAMYLM 347 (416)
T ss_dssp H--------HHHHHHHHHHTCSCHHHH-HHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHTTSTTEEE-CCCCBTTEEE
T ss_pred H--------HHHHHHhccccCCCcHHH-HHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCcc-cCCCeeEEEE
Confidence 2 222222 1233333333 55555554334678899999999999999999998877764 6788899999
Q ss_pred EecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeecCHHHHHHHHHHHHHHHHHHhh
Q 047983 155 YCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAVEPSAFEIGLGRMKAFYYRHAK 231 (233)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~~~~~l~~~~~~l~~~l~~~~~ 231 (233)
++++....+...++.+++.++++++||.+.||+.|+..+++|++++.+++++++++++|.++++++.+
T Consensus 348 ---------~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~iRis~~~~~e~l~~~l~~l~~~l~~~~~ 415 (416)
T 1bw0_A 348 ---------SRIDLEKYRDIKTDVEFFEKLLEEENVQVLPGTIFHAPGFTRLTTTRPVEVYREAVERIKAFCQRHAA 415 (416)
T ss_dssp ---------EEECGGGBSSCCSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCSCHHHHHHHHHHHHHHHHHHBC
T ss_pred ---------EeCCHHHcCCCCCHHHHHHHHHHHCCEEEecccccCCCCeEEEEecCCHHHHHHHHHHHHHHHHHhhc
Confidence 66653211111235666677777889999999999888899999988899999999999999988654
No 5
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=99.95 E-value=2.2e-27 Score=212.85 Aligned_cols=203 Identities=21% Similarity=0.284 Sum_probs=152.7
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCC-ccccccccC--------CccCEEEEccCcccc-CCCCceEEEEEe---cCCC
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNT-HFVPMGVFG--------SIVPVLTLGSISKRW-IVPGWRLGWLVT---SDPN 68 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~-~~~~~~~~~--------~~~~~i~~~s~sK~~-~~~G~R~G~~~~---~~~~ 68 (233)
+|+++|++||++||+||+|.++.|++. .+.++..+. ...++|+++|+||.| |+||+|+||++. ++
T Consensus 259 ~i~~la~~~~~~li~De~y~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~~~~-- 336 (498)
T 3ihj_A 259 DVIHFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVINLHP-- 336 (498)
T ss_dssp HHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSCCEEEEEESCCH--
T ss_pred HHHHHHHHcCcEEEEEcCccccccCCCCCcCCHHHHHHHhcccccCceeEEEEeccccccccCcccceEEEEEecCCH--
Confidence 689999999999999999999999864 455665432 234689999999999 789999999984 33
Q ss_pred ccccccchhhhhhhhhHHhhhhhh--hhccCcchHHHHHHHHhhh------c---HHHHHHHHHHHHHHHHHHHHHHhhc
Q 047983 69 GILQDLGVAFFHSISLNMRMDDYL--LLSESVYTTVGAVPQILEK------T---EEEFFSKITDILREAADICCDRLKE 137 (233)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~------~---~~~~~~~~~~~~~~~~~~l~~~L~~ 137 (233)
.++ ..+.... ..+.+...| .+++.+++. . ..++..++++.++++++.+.+.|++
T Consensus 337 ~l~--------------~~l~~~~~~~~~~~~~~q-~a~~~~l~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~ 401 (498)
T 3ihj_A 337 EIK--------------GQLVKLLSVRLCPPVSGQ-AAMDIVVNPPVAGEESFEQFSREKESVLGNLAKKAKLTEDLFNQ 401 (498)
T ss_dssp HHH--------------HHHHHHHHHSCCCCHHHH-HHHHHHTCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHH--------------HHHHHHHhccCCCCHHHH-HHHHHHhcCCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 333 2222222 233333333 566666643 1 2245677889999999999999999
Q ss_pred CCCcccccCCCccEEEEEecCCCccccccccccc-------CCCCChHHHHHHHHhccCEEEECCcccCC---CCcEEEE
Q 047983 138 IPCITCPKKPEGSMFVMYCGSEDKCLLKLNYSLL-------EGINSDTEFALKLAKEESIIVLPGITVGL---KDWLRIT 207 (233)
Q Consensus 138 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~ll~~~gi~v~pg~~f~~---~~~~Rl~ 207 (233)
++++.+ .+|+||+|+| ++++.+.. .++.++..++.++|+++||.++||+.|+. .+++|++
T Consensus 402 ~~g~~~-~~p~gg~~~~---------~~l~~p~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pG~~f~~~~~~~~~Ris 471 (498)
T 3ihj_A 402 VPGIHC-NPLQGAMYAF---------PRIFIPAKAVEAAQAHQMAPDMFYCMKLLEETGICVVPGSGFGQREGTYHFRMT 471 (498)
T ss_dssp STTEEC-CCCCBSSEEC---------CEECCCHHHHHHHHHTTSCHHHHHHHHHHHHHCBCCEEGGGTCCCTTCCBEEEE
T ss_pred CCCcEe-cCCCeEEEEE---------EeccCchhhhHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEE
Confidence 888875 7899999999 66554321 13322334488899999999999999984 4699999
Q ss_pred eecCHHHHHHHHHHHHHHHHHHhh
Q 047983 208 FAVEPSAFEIGLGRMKAFYYRHAK 231 (233)
Q Consensus 208 ~~~~~~~l~~~~~~l~~~l~~~~~ 231 (233)
++.+++++++++++|.++++++.+
T Consensus 472 ~~~~~e~l~~~i~~L~~~~~~~~~ 495 (498)
T 3ihj_A 472 ILPPVEKLKTVLQKVKDFHINFLE 495 (498)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred eCCCHHHHHHHHHHHHHHHHHHHH
Confidence 988999999999999999988765
No 6
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=99.95 E-value=3.5e-27 Score=204.37 Aligned_cols=194 Identities=17% Similarity=0.357 Sum_probs=145.9
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHS 81 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~ 81 (233)
+|+++|++||++||+||+|+++.+++ .+.++..++. +++|+++|+||.|+++|+|+||+++++ .+++. +
T Consensus 188 ~i~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~-~~~i~~~s~SK~~~~~G~RiG~~~~~~--~~~~~---l---- 256 (385)
T 1b5p_A 188 ALARLAVEHDFYLVSDEIYEHLLYEG-EHFSPGRVAP-EHTLTVNGAAKAFAMTGWRIGYACGPK--EVIKA---M---- 256 (385)
T ss_dssp HHHHHHHHTTCEEEEECTTTTCBSSS-CCCCGGGTCT-TTEEEEEESTTTTTCGGGCCEEEECCH--HHHHH---H----
T ss_pred HHHHHHHHcCCEEEEEccchhcccCC-CCCCHHHcCC-CCEEEEEechhhcCCcccceEEEEeCH--HHHHH---H----
Confidence 68999999999999999999999876 5556666655 889999999999999999999999976 34321 1
Q ss_pred hhhHHhhhhhhhhccCcchHHHHHHHHhhhc--HHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCC
Q 047983 82 ISLNMRMDDYLLLSESVYTTVGAVPQILEKT--EEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSE 159 (233)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~ 159 (233)
.........+.+...+ .+....++.. ..+++++.++.++++++.+.+.|+++ ++.. ..|++++|+|
T Consensus 257 ----~~~~~~~~~~~~~~~~-~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~~~~~~~~----- 324 (385)
T 1b5p_A 257 ----ASVSRQSTTSPDTIAQ-WATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTAL-GLKA-VRPSGAFYVL----- 324 (385)
T ss_dssp ----HHHHHTTTCSCCHHHH-HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TCCB-CCCSBTTEEE-----
T ss_pred ----HHHHhhccCCCCHHHH-HHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHHC-CCee-cCCCeeEEEE-----
Confidence 2222222223333333 3344444331 35678999999999999999999887 6654 6789999999
Q ss_pred CcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeecCHHHHHHHHHHHHHHHH
Q 047983 160 DKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAVEPSAFEIGLGRMKAFYY 227 (233)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~~~~~l~~~~~~l~~~l~ 227 (233)
+.++. . +. +..++..+++ ++||.+.||+.|+.++++|+|++.+++++++++++|.++++
T Consensus 325 ----~~~~~--~-~~-~~~~l~~~l~-~~gv~v~~g~~f~~~~~iRis~~~~~~~i~~~l~~l~~~l~ 383 (385)
T 1b5p_A 325 ----MDTSP--I-AP-DEVRAAERLL-EAGVAVVPGTDFAAFGHVRLSYATSEENLRKALERFARVLG 383 (385)
T ss_dssp ----EECTT--T-CS-SHHHHHHHHH-HTTEECEESGGGTCTTEEEEECCSCHHHHHHHHHHGGGGC-
T ss_pred ----EecCC--C-CC-CHHHHHHHHH-HCCeEEecccccCCCCeEEEEecCCHHHHHHHHHHHHHHHh
Confidence 55531 1 12 3556666655 88999999999987889999999989999999999987764
No 7
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=99.95 E-value=8.5e-27 Score=209.15 Aligned_cols=203 Identities=20% Similarity=0.284 Sum_probs=152.4
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCC-ccccccc----c---CCccCEEEEccCcccc-CCCCceEEEEEe---cCCCc
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNT-HFVPMGV----F---GSIVPVLTLGSISKRW-IVPGWRLGWLVT---SDPNG 69 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~-~~~~~~~----~---~~~~~~i~~~s~sK~~-~~~G~R~G~~~~---~~~~~ 69 (233)
+|+++|++||++||+||+|.++.|++. .+.++.. + ..+.++|+++|+||.| |++|+|+||+++ ++ +
T Consensus 261 ~i~~la~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~--~ 338 (500)
T 3tcm_A 261 DIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFSA--P 338 (500)
T ss_dssp HHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGGGCCEEEEEESCCT--T
T ss_pred HHHHHHHHcCCEEEEecCccccccCCCCCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCccceEEEEEeCCCH--H
Confidence 688899999999999999999999653 4445432 2 3345689999999998 899999999998 44 3
Q ss_pred cccccchhhhhhhhhHHhhhhhhh--hccCcchHHHHHHHHhhh---------cHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 047983 70 ILQDLGVAFFHSISLNMRMDDYLL--LSESVYTTVGAVPQILEK---------TEEEFFSKITDILREAADICCDRLKEI 138 (233)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~---------~~~~~~~~~~~~~~~~~~~l~~~L~~~ 138 (233)
++ ..+..... .+.+...+ .+++.+++. ...++..++++.++++++.+.+.|+++
T Consensus 339 ~~--------------~~l~~~~~~~~~~~~~~q-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~ 403 (500)
T 3tcm_A 339 VR--------------EQIYKIASVNLCSNITGQ-ILASLVMNPPKASDESYASYKAEKDGILASLARRAKALEHAFNKL 403 (500)
T ss_dssp HH--------------HHHHHHHHTTCCCCHHHH-HHHHHHHSCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred HH--------------HHHHHHHhcccCCCHHHH-HHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 44 23322222 33333333 455555532 134677888999999999999999998
Q ss_pred CCcccccCCCccEEEEEecCCCccccccccccc-------CCCCChHHHHHHHHhccCEEEECCcccCC---CCcEEEEe
Q 047983 139 PCITCPKKPEGSMFVMYCGSEDKCLLKLNYSLL-------EGINSDTEFALKLAKEESIIVLPGITVGL---KDWLRITF 208 (233)
Q Consensus 139 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~ll~~~gi~v~pg~~f~~---~~~~Rl~~ 208 (233)
+++.+ .+|+||+|+| +++..+.. .+..++..++.++|+++||.++||+.|+. .+++|+++
T Consensus 404 ~g~~~-~~~~g~~~~~---------~~~~lp~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~g~~~iRis~ 473 (500)
T 3tcm_A 404 EGITC-NEAEGAMYVF---------PQICLPQKAIEAAKAANKAPDAFYALRLLESTGIVVVPGSGFGQVPGTWHFRCTI 473 (500)
T ss_dssp TTEEC-CCCCBTTEEC---------CEECCCHHHHHHHHHHTSCHHHHHHHHHHHHHCEECEESTTTCCCTTCCBEEEES
T ss_pred CCcEE-ecCCeEEEEe---------eeecCchhhHHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEE
Confidence 88875 7899999999 65544321 12223455677899999999999999984 46899999
Q ss_pred ecCHHHHHHHHHHHHHHHHHHhh
Q 047983 209 AVEPSAFEIGLGRMKAFYYRHAK 231 (233)
Q Consensus 209 ~~~~~~l~~~~~~l~~~l~~~~~ 231 (233)
+.+++++++++++|.++++++.+
T Consensus 474 ~~~~e~i~~~i~~l~~~~~~~~~ 496 (500)
T 3tcm_A 474 LPQEDKIPAVISRFTVFHEAFMS 496 (500)
T ss_dssp CSCTTTHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHH
Confidence 98889999999999999987754
No 8
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=99.94 E-value=1.5e-26 Score=204.08 Aligned_cols=205 Identities=14% Similarity=0.130 Sum_probs=151.5
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCC-ccCEEEEccCccccCCCCceEEEEEecCCCccccc--cchhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGS-IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQD--LGVAF 78 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~--~~~~~ 78 (233)
+|+++|++||++||+||+|+++.+++..+.++..++. .++++++.|+||.|+++|+|+||+++++ ++++. ..+.
T Consensus 233 ~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~--~~~~~~~~~~~- 309 (449)
T 3qgu_A 233 ELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIPGADEVAIETCSFSKYAGFTGVRLGWTVVPK--ALKYANGEPVH- 309 (449)
T ss_dssp HHHHHHHHHTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECSGGGTCTTCCCEEEECCT--TCBCTTSCBHH-
T ss_pred HHHHHHHHCCcEEEEEcchHhhhcCCCCCCCHhhccCCCCcEEEEecchhhcCCccceeEEEecCH--HHHhhhhhhHH-
Confidence 6889999999999999999999998765666666654 5789999999999999999999999987 44421 0000
Q ss_pred hhhhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecC
Q 047983 79 FHSISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGS 158 (233)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~ 158 (233)
............+.++..+ .+....+.....++++++++.++++++.+.+.|+++ ++.. ..|++++|+|
T Consensus 310 ----~~~~~~~~~~~~~~~~~~~-~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~~~~~~~~---- 378 (449)
T 3qgu_A 310 ----ADWNRVMTTCFNGASNIVQ-AGGLACLQPEGLKEMNAMIKFYKENAQILKTTFTEM-GFSV-YGGDDAPYIW---- 378 (449)
T ss_dssp ----HHHHHHHHHSCCCCCHHHH-HHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCE-EESSSSSEEE----
T ss_pred ----HHHHHHhhcccCCCCHHHH-HHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCee-eCCCCeeEEE----
Confidence 0002222222222333333 444444444345789999999999999999999987 5654 6788999999
Q ss_pred CCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC--CCcEEEEeecCHHHHHHHHHHHHHHHHHHhh
Q 047983 159 EDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL--KDWLRITFAVEPSAFEIGLGRMKAFYYRHAK 231 (233)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~~Rl~~~~~~~~l~~~~~~l~~~l~~~~~ 231 (233)
+.++ . . ++.+++.++++++||.+.||+.|+. ++++|+++..+++++++++++|.+++++..+
T Consensus 379 -----~~~~-~----~-~~~~~~~~l~~~~gI~v~pg~~f~~~~~~~iRis~~~~~e~i~~~l~~l~~~~~~~~~ 442 (449)
T 3qgu_A 379 -----VGFP-G----K-PSWDVFAEILERCNIVTTPGSGYGPAGEGFVRASAFGSRENILEAVRRFKEAYGKRNA 442 (449)
T ss_dssp -----EECT-T----S-CHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHHC----
T ss_pred -----EECC-C----C-CHHHHHHHHHHHCCEEEecchHhCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHhcCc
Confidence 5554 1 1 4677777888778999999999985 6899999988999999999999999877654
No 9
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=99.94 E-value=3.9e-26 Score=200.51 Aligned_cols=200 Identities=17% Similarity=0.220 Sum_probs=146.8
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccC-CccCEEEEccCccccCCCCceEEEEEecCCCccc--cccchhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFG-SIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGIL--QDLGVAF 78 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~--~~~~~~~ 78 (233)
+|+++|++||++||+||+|.++.+++. +.++..+. ..+++|++.|+||.|+++|+|+||+++++ +++ +.+.++
T Consensus 222 ~l~~la~~~~~~li~Dea~~~~~~~~~-~~~~~~~~~~~~~~i~~~S~SK~~g~~G~r~G~~~~~~--~~~~~~~~~~~- 297 (432)
T 3ei9_A 222 QLVEFAKKNGSIIVYDSAYAMYMSDDN-PRSIFEIPGAEEVAMETASFSNYAGFTGVRLGWTVIPK--KLLYSDGFPVA- 297 (432)
T ss_dssp HHHHHHHHHTCEEEEECTTGGGCCSSC-CSSGGGSTTGGGTEEEEEESHHHHCTTTTCCEEEECCT--TCBCTTSCBHH-
T ss_pred HHHHHHHHcCcEEEEccchHhhccCCC-CCChhhcCCCCCeEEEEecchhccCCcccceEEEEECh--HHhhcchHHHH-
Confidence 688899999999999999999988754 33444443 35789999999999999999999999988 331 000112
Q ss_pred hhhhhhHHhhhhhhh-hccCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEe
Q 047983 79 FHSISLNMRMDDYLL-LSESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYC 156 (233)
Q Consensus 79 ~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~ 156 (233)
..+..... ...++++.. .+..+.+.....++++++++.++++++.+.+.|+++ ++.. ..|.+++|+|
T Consensus 298 -------~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~~~~~~~~-- 366 (432)
T 3ei9_A 298 -------KDFNRIICTCFNGASNISQAGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTSL-GYDV-YGGKNAPYVW-- 366 (432)
T ss_dssp -------HHHHHHHHHSCCCSCHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCE-EECSSSSEEE--
T ss_pred -------HHHHHHhccccCCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHC-Ccee-cCCCcceEEE--
Confidence 22322211 111223332 333333433445789999999999999999999887 5654 5677899999
Q ss_pred cCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC--CCcEEEEeecCHHHHHHHHHHHHHHHHHH
Q 047983 157 GSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL--KDWLRITFAVEPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~~Rl~~~~~~~~l~~~~~~l~~~l~~~ 229 (233)
+.++ . . ++.+++.++++++||.+.||+.|++ ++++|+|+..++++++++++||++.-..+
T Consensus 367 -------~~~~--~---~-~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~iRis~~~~~e~l~~~l~rl~~~~~~~ 428 (432)
T 3ei9_A 367 -------VHFP--N---Q-SSWDVFAEILEKTHVVTTPGSGFGPGGEGFVRVSAFGHRENILEACRRFKQLYKHH 428 (432)
T ss_dssp -------EECT--T---S-CHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHHTTS
T ss_pred -------EECC--C---C-CHHHHHHHHHHHCCEEEeCchHhCCCCCCEEEEEecCCHHHHHHHHHHHHHHhhhc
Confidence 5554 1 1 4677888888888999999999986 78999999889999999999998765433
No 10
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=99.94 E-value=8.4e-26 Score=195.39 Aligned_cols=199 Identities=18% Similarity=0.447 Sum_probs=149.4
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCC--ccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGS--IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
+|+++|++||+++|+||+|+++.+++..+.++..++. .++++++.|+||.|+++|+|+||+++++ ++++. +
T Consensus 187 ~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~--~~~~~---l-- 259 (388)
T 1j32_A 187 AIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGFLAGPV--PLVKA---A-- 259 (388)
T ss_dssp HHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEESTTTTTCTTTCCEEEECCH--HHHHH---H--
T ss_pred HHHHHHHHcCCEEEEEccchhcccCCCCCCCHHHccccccCCEEEEeechhccCCcccceEEEEeCH--HHHHH---H--
Confidence 6899999999999999999999987765556665543 5689999999999999999999999987 34321 1
Q ss_pred hhhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCC
Q 047983 80 HSISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSE 159 (233)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~ 159 (233)
.......+.+.++..+ .+....++ ...+++++.++.++++++.+.+.|++++++.. ..|.+++|+|
T Consensus 260 ------~~~~~~~~~~~~~~~~-~a~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~-~~~~~~~~~~----- 325 (388)
T 1j32_A 260 ------TKIQGHSTSNVCTFAQ-YGAIAAYE-NSQDCVQEMLAAFAERRRYMLDALNAMPGLEC-PKPDGAFYMF----- 325 (388)
T ss_dssp ------HHHHHTTTCSCCHHHH-HHHHHHHH-SCSHHHHHHHHHHHHHHHHHHHHHHTCTTCBC-CCCCBTTEEC-----
T ss_pred ------HHHHhhcccCCCHHHH-HHHHHHHh-CCcHHHHHHHHHHHHHHHHHHHHHhhCCCCcc-cCCCeeEEEE-----
Confidence 2222222233322222 33333343 23567889999999999999999998877764 6788999999
Q ss_pred CcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeecCHHHHHHHHHHHHHHHHHH
Q 047983 160 DKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAVEPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~~~~~l~~~~~~l~~~l~~~ 229 (233)
+.++. . +. +..++..++++++||.+.||+.|+..+++|++++.+++++++++++|.+++++.
T Consensus 326 ----~~~~~--~-~~-~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~i~~~~~~l~~~l~~~ 387 (388)
T 1j32_A 326 ----PSIAK--T-GR-SSLDFCSELLDQHQVATVPGAAFGADDCIRLSYATDLDTIKRGMERLEKFLHGI 387 (388)
T ss_dssp ----CBCGG--G-TC-CHHHHHHHHHHHHCEECEEGGGGTCTTBEEEECCSCHHHHHHHHHHHHHHHHHH
T ss_pred ----EecCC--C-CC-CHHHHHHHHHHhCCEEEeChhhhCCCCcEEEEecCCHHHHHHHHHHHHHHHHHh
Confidence 54432 1 11 355666666666899999999998889999999989999999999999998764
No 11
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=99.94 E-value=8e-26 Score=196.38 Aligned_cols=199 Identities=18% Similarity=0.262 Sum_probs=152.0
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccC--CccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFG--SIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~--~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
+|+++|++||+++|+||+|+.+.+++..+.++..++ ..++++++.|+||.|+++|+|+||+++++ .+++. +
T Consensus 203 ~i~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~--~~~~~---l-- 275 (407)
T 3nra_A 203 QIAALAARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGVAFGSR--AIIAR---M-- 275 (407)
T ss_dssp HHHHHHHHHTCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCEEEEECH--HHHHH---H--
T ss_pred HHHHHHHHcCCEEEEEccccccccCCCCCCChhhcCcccCCcEEEEeCcccccCCCeeeEEEEEcCH--HHHHH---H--
Confidence 689999999999999999999999876666666664 46789999999999999999999999976 34421 1
Q ss_pred hhhhhHHhhhhhhhhccCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecC
Q 047983 80 HSISLNMRMDDYLLLSESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGS 158 (233)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~ 158 (233)
.........+ +++.. .++...++ ...+++++.++.++++++.+.+.|++++++.. ..|.+++|+|
T Consensus 276 ------~~~~~~~~~~--~~~~~~~a~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~~---- 341 (407)
T 3nra_A 276 ------EKLQAIVSLR--AAGYSQAVLRGWFD-EAPGWMEDRIARHQAIRDELLHVLRGCEGVFA-RTPQAGSYLF---- 341 (407)
T ss_dssp ------HHHHHHHTSS--SCHHHHGGGGGTTC-CCTTHHHHHHHHHHHHHHHHHHHHHTSTTCBC-CCCSBSSEEC----
T ss_pred ------HHHHhhhccC--CChHHHHHHHHHHh-ccchHHHHHHHHHHHHHHHHHHHHhcCCCcee-ccCCeeEEEE----
Confidence 2222222232 33333 44444443 23457788889999999999999998877764 6788999999
Q ss_pred CCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC--CCcEEEEeecCHHHHHHHHHHHHHHHHHHh
Q 047983 159 EDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL--KDWLRITFAVEPSAFEIGLGRMKAFYYRHA 230 (233)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~~Rl~~~~~~~~l~~~~~~l~~~l~~~~ 230 (233)
+.++.. +. +..++...+++++||.+.||+.|++ .+++|++++.+++++++++++|.++++++.
T Consensus 342 -----~~~~~~---~~-~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~~~~i~~~~~~l~~~~~~~~ 406 (407)
T 3nra_A 342 -----PRLPKL---AV-APAEFVKILRLQAGVVVTPGTEFSPHTADSVRLNFSQDHEAAVAAARRIVTLVERYR 406 (407)
T ss_dssp -----CBCCCB---SS-CHHHHHHHHHHHHCEECEEGGGTCTTCTTBEEEECCSCHHHHHHHHHHHHHHHHHHB
T ss_pred -----EeCCCC---CC-CHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhh
Confidence 555421 11 3556666666778999999999984 689999999999999999999999998764
No 12
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=99.94 E-value=2.3e-25 Score=192.96 Aligned_cols=198 Identities=20% Similarity=0.370 Sum_probs=147.3
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHS 81 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~ 81 (233)
+|+++|++||+++|+||+|.++.+++.. .++.. ..+++++++|+||.++++|+|+||+++++ .+++. +
T Consensus 185 ~l~~~~~~~~~~li~De~~~~~~~~~~~-~~~~~--~~~~~i~~~s~sK~~g~~G~r~G~~~~~~--~~~~~---~---- 252 (391)
T 3h14_A 185 ALIEAAQAQGASFISDEIYHGIEYEAKA-VTALE--LTDECYVINSFSKYFSMTGWRVGWMVVPE--DQVRV---V---- 252 (391)
T ss_dssp HHHHHHHHTTCEEEEECTTTTCBSSSCC-CCGGG--TCSSSEEEEESSSTTCCTTSCCEEEECCG--GGHHH---H----
T ss_pred HHHHHHHHcCCEEEEECcchhcccCCCC-cChhh--cCCCEEEEEechhccCCccceeEEEEeCH--HHHHH---H----
Confidence 6899999999999999999999988753 23322 25788999999999999999999999987 34421 1
Q ss_pred hhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCCCc
Q 047983 82 ISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSEDK 161 (233)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~ 161 (233)
.........+.++..+ .+..+.+. ..+++++.++.++++++.+.+.|++++... +..|++++|+|
T Consensus 253 ----~~~~~~~~~~~~~~~~-~a~~~~l~--~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~------- 317 (391)
T 3h14_A 253 ----ERIAQNMFICAPHASQ-VAALAALD--CDAELQANLDVYKANRKLMLERLPKAGFTR-IAPPDGAFYVY------- 317 (391)
T ss_dssp ----HHHHHHTTCCCCHHHH-HHHHHHTT--CHHHHHHHHHHHHHHHHHHHHHHHHHTCCC-BCCCCBTTEEE-------
T ss_pred ----HHHHhhhccCCCHHHH-HHHHHHhC--ChHHHHHHHHHHHHHHHHHHHHHHHcCCCc-ccCCCeeEEEE-------
Confidence 2222222233332333 33333343 567889999999999999999998874333 36788999999
Q ss_pred ccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC---CCcEEEEeecCHHHHHHHHHHHHHHHHHHhhc
Q 047983 162 CLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL---KDWLRITFAVEPSAFEIGLGRMKAFYYRHAKK 232 (233)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~---~~~~Rl~~~~~~~~l~~~~~~l~~~l~~~~~~ 232 (233)
+.++.. + .+..++..++++++||.+.||+.|+. .+++|++++.+++++++++++|.++++++.+.
T Consensus 318 --~~~~~~---~-~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~iRis~~~~~~~i~~~l~~l~~~~~~~~~~ 385 (391)
T 3h14_A 318 --ADVSDL---T-DDSRAFAAEILEKAGVAVTPGLDFDPERGAGTLRFSYARATADIEEGLDRLEAFMQARGEG 385 (391)
T ss_dssp --EECTTT---C-SCHHHHHHHHHHHHCEECEEGGGTCTTTGGGEEEEECCSCHHHHHHHHHHHHHHHHHC---
T ss_pred --EecCcc---C-CCHHHHHHHHHHHCCEEEcCchhhCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHHhccc
Confidence 555421 1 13667777777777999999999986 58999999999999999999999999887654
No 13
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=99.93 E-value=4.4e-26 Score=196.15 Aligned_cols=198 Identities=15% Similarity=0.204 Sum_probs=150.2
Q ss_pred hHHHHHHHcCcEEEEccccCccccCC-CccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGN-THFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
+|+++|++||+++|+||+|.++.+++ ..+.++..++..++++++.|+||.+|++|+|+||++++++ .+++. +
T Consensus 174 ~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~-~~~~~---~--- 246 (377)
T 3fdb_A 174 ELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDTAASVCITITAPSKAWNIAGLKCAQIIFSNP-SDAEH---W--- 246 (377)
T ss_dssp HHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSCHHHHHHEEEEECSTTTTTCGGGCCEEEECCSH-HHHHH---H---
T ss_pred HHHHHHHHcCCEEEEEcccchhhcCCCCCcccHHHccCCCcEEEEEeChHhccCcchhheEEEeCCH-HHHHH---H---
Confidence 67888999999999999999999987 5555666555568899999999999999999999988542 23321 1
Q ss_pred hhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhc-CCCcccccCCCccEEEEEecCC
Q 047983 81 SISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKE-IPCITCPKKPEGSMFVMYCGSE 159 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~g~~~~~~~~~ 159 (233)
.......+.+.++..+ .+....++. .++++++.++.++++++.+.+.|++ ++++.. ..|++++++|
T Consensus 247 -----~~~~~~~~~~~~~~~~-~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~----- 313 (377)
T 3fdb_A 247 -----QQLSPVIKDGASTLGL-IAAEAAYRY-GTDFLNQEVAYLKNNHDFLLHEIPKRIPGAKI-TPMQATYLMW----- 313 (377)
T ss_dssp -----HHSCHHHHCCCCHHHH-HHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHSTTCEE-CCCSBCSEEE-----
T ss_pred -----HHHHHhhcCCCCHHHH-HHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHhhCCCceE-ecCCeeEEEE-----
Confidence 2222222233333333 333333432 2678899999999999999999988 788775 7899999999
Q ss_pred CcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC--CCcEEEEeecCHHHHHHHHHHHHHHHHH
Q 047983 160 DKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL--KDWLRITFAVEPSAFEIGLGRMKAFYYR 228 (233)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~~Rl~~~~~~~~l~~~~~~l~~~l~~ 228 (233)
+.++... . +.+++..+++++||.+.||+.|+. .+++|++++.+++++++++++|.+++++
T Consensus 314 ----~~~~~~~---~--~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~Ris~~~~~e~i~~~l~~l~~~l~~ 375 (377)
T 3fdb_A 314 ----IDFRDTT---I--EGSPSEFFIEKAKVAMNDGAWFGEDGTGFCRLNFATSREVLEEAIDRMAKAVSH 375 (377)
T ss_dssp ----EECTTSC---C--CSCHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHHTT
T ss_pred ----EECcccC---C--CHHHHHHHHHhCCEEecCChhccCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhh
Confidence 5554321 1 345667777778999999999986 6899999999999999999999998864
No 14
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=99.93 E-value=3.4e-26 Score=199.94 Aligned_cols=203 Identities=17% Similarity=0.377 Sum_probs=151.4
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCC-ccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGS-IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|+++|++||+++|+||+|.++.+++..+.++..+.. .++++++.|+||.|+++|+|+||+++++ .+++. +
T Consensus 197 ~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~--~~~~~---~-- 269 (422)
T 3fvs_A 197 ELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATGWKVGWVLGPD--HIMKH---L-- 269 (422)
T ss_dssp HHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEECCH--HHHHH---H--
T ss_pred HHHHHHHHHcCcEEEEEccchhhccCCCCCCChhhcccccCcEEEEecchhccCCccceEEEEEeCH--HHHHH---H--
Confidence 36899999999999999999999998876666666653 5789999999999999999999999987 34421 1
Q ss_pred hhhhhHHhhhhhhhhccCcchHHHHHHHHhhh------cHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEE
Q 047983 80 HSISLNMRMDDYLLLSESVYTTVGAVPQILEK------TEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFV 153 (233)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~ 153 (233)
........++.++..+ .++...+.. ...+++++.++.++++++.+.+.|+++ ++.. ..|++|+|+
T Consensus 270 ------~~~~~~~~~~~~~~~~-~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~~~~~~~ 340 (422)
T 3fvs_A 270 ------RTVHQNSVFHCPTQSQ-AAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQSV-GLKP-IIPQGSYFL 340 (422)
T ss_dssp ------HHHHHTTTCCCCHHHH-HHHHHHHHHHHHTTTCTTCHHHHHHHHHHHHHHHHHHHHHTT-TCEE-EBCSBSSEE
T ss_pred ------HHHHhhccCCCCcHHH-HHHHHHHhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHc-CCee-cCCCeeeEE
Confidence 2222222333333333 444444432 235688999999999999999999988 5653 678999999
Q ss_pred EEecCCCcccccccccc--cC---CC---CChHHHHHHHHhccCEEEECCcccCC-------CCcEEEEeecCHHHHHHH
Q 047983 154 MYCGSEDKCLLKLNYSL--LE---GI---NSDTEFALKLAKEESIIVLPGITVGL-------KDWLRITFAVEPSAFEIG 218 (233)
Q Consensus 154 ~~~~~~~~~~~~~~~~~--~~---~~---~~~~~~~~~ll~~~gi~v~pg~~f~~-------~~~~Rl~~~~~~~~l~~~ 218 (233)
| +.++... .. .. ..+.+++.++++++||.+.||+.|+. .+++|++++.++++++++
T Consensus 341 ~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~~~e~i~~~ 411 (422)
T 3fvs_A 341 I---------TDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDHYIRFCFVKDEATLQAM 411 (422)
T ss_dssp E---------EECHHHHHHCCCCCCCTTCCHHHHHHHHHHHHHCEECEEGGGGSCHHHHTTSCSEEEEECCCCHHHHHHH
T ss_pred E---------EechhhcccccccccccccccHHHHHHHHHHhcCEEEeCcHHhcCCcCCCCCCCeEEEEecCCHHHHHHH
Confidence 9 4432110 00 00 00457788888889999999999963 689999999999999999
Q ss_pred HHHHHHHHHH
Q 047983 219 LGRMKAFYYR 228 (233)
Q Consensus 219 ~~~l~~~l~~ 228 (233)
+++|.+++++
T Consensus 412 l~~l~~~l~~ 421 (422)
T 3fvs_A 412 DEKLRKWKVE 421 (422)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHhh
Confidence 9999998764
No 15
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=99.93 E-value=4e-25 Score=191.77 Aligned_cols=201 Identities=15% Similarity=0.170 Sum_probs=150.7
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCC--ccCEEEEccCccccCCCCceEEEEEecCCCccccccchhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGS--IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAF 78 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~ 78 (233)
++|+++|++||++||+||+|+++.+++..+.++..++. .++++++.|+||.++++|+|+||++++++ +++
T Consensus 187 ~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~-~~~------- 258 (399)
T 1c7n_A 187 QKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKNP-DIR------- 258 (399)
T ss_dssp HHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCH-HHH-------
T ss_pred HHHHHHHHHcCCEEEEEccccccccCCCCcccHHHcCccccCcEEEEEeChhhccccchheEEEEECCH-HHH-------
Confidence 36899999999999999999999987765556665543 57899999999999999999999999752 233
Q ss_pred hhhhhhHHhhhhhhh-hcc-CcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhc-CCCcccccCCCccEEEE
Q 047983 79 FHSISLNMRMDDYLL-LSE-SVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKE-IPCITCPKKPEGSMFVM 154 (233)
Q Consensus 79 ~~~~~~~~~~~~~~~-~~~-~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~g~~~~ 154 (233)
..+..... .+. ++++.. .+..+.++.. .+++++.++.++++++.+.+.|++ ++++.. ..|.+++++|
T Consensus 259 -------~~l~~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~ 329 (399)
T 1c7n_A 259 -------ERFTKSRDATSGMPFTTLGYKACEICYKEC-GKWLDGCIKVIDKNQRIVKDFFEVNHPEIKA-PLIEGTYLQW 329 (399)
T ss_dssp -------HHHHHHHHHTTCCCCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHCTTSBC-CCCSBSSEEE
T ss_pred -------HHHHHHHhhcccCCCCHHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHhhCCCCeE-ecCCceEEEE
Confidence 22222211 111 223333 3343444332 578899999999999999999988 877764 6788999999
Q ss_pred EecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC--CCcEEEEeecCHHHHHHHHHHHHHHHHHHhh
Q 047983 155 YCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL--KDWLRITFAVEPSAFEIGLGRMKAFYYRHAK 231 (233)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~~Rl~~~~~~~~l~~~~~~l~~~l~~~~~ 231 (233)
++++.. +. +..++...+++++||.+.||+.|+. .+++|++++..++++++++++|.+++++..+
T Consensus 330 ---------~~~~~~---~~-~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~~~~l~~~l~~l~~~l~~~~~ 395 (399)
T 1c7n_A 330 ---------IDFRAL---KM-DHKAMEEFMIHKAQIFFDEGYIFGDGGIGFERINLAAPSSVIQESLERLNKALKDLKN 395 (399)
T ss_dssp ---------EECGGG---CC-CHHHHHHHHHHTTCCCCEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHHHHHC-
T ss_pred ---------EEcccC---CC-CHHHHHHHHHHhCCEEEeCccccCCCCCCeEEEEeccCHHHHHHHHHHHHHHHHHHHh
Confidence 555421 11 3455665555688999999999973 6899999999889999999999999987753
No 16
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=99.93 E-value=2.5e-25 Score=194.25 Aligned_cols=201 Identities=20% Similarity=0.326 Sum_probs=148.8
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCC-ccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGS-IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
+|+++|++||++||+||+|.++.+++..+.++..++. .++++++.|+||.++++|+|+||+++++ ++++. +
T Consensus 196 ~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--~~~~~---l--- 267 (412)
T 2x5d_A 196 RVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSYNMAGWRIGFMVGNP--ELVSA---L--- 267 (412)
T ss_dssp HHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTGGGTEEEEEECC-CCSCTTSCCEEEEECH--HHHHH---H---
T ss_pred HHHHHHHHcCCEEEEeccccccccCCCCCCChhhccCccCcEEEEecCccccCCcccceEEEEcCH--HHHHH---H---
Confidence 6899999999999999999999987655556655543 5789999999999999999999999976 34421 1
Q ss_pred hhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCCC
Q 047983 81 SISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSED 160 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~ 160 (233)
.......+.+.++..+ .+....++. .++++++.++.++++++.+.+.|+++ ++.. ..|.+|+|+|
T Consensus 268 -----~~~~~~~~~~~~~~~~-~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~~~g~~~~------ 332 (412)
T 2x5d_A 268 -----ARIKSYHDYGTFTPLQ-VAAIAALEG-DQQCVRDIARQYQQRRDVLVKGLREA-GWMV-ENPKASMYVW------ 332 (412)
T ss_dssp -----HHHHHHHCCCCCHHHH-HHHHHHHHS-CSHHHHHHHHHHHHHHHHHHHHHHHH-TCCC-CCCSBSSEEE------
T ss_pred -----HHHHhhhccCCCHHHH-HHHHHHHhC-CHHHHHHHHHHHHHHHHHHHHHHHHC-CCEe-cCCCeeeEEE------
Confidence 2222222233333333 444444433 24678999999999999999999887 5554 6788999999
Q ss_pred cccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC--CCcEEEEeecCHHHHHHHHHHHHHHHHHHh
Q 047983 161 KCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL--KDWLRITFAVEPSAFEIGLGRMKAFYYRHA 230 (233)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~~Rl~~~~~~~~l~~~~~~l~~~l~~~~ 230 (233)
++++... .. .+..++..++++++||.+.||+.|+. .+++|++++.+++++++++++|.+++++..
T Consensus 333 ---~~~~~~~-~~-~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~l~~~~ 399 (412)
T 2x5d_A 333 ---AKIPEPY-AH-LGSLEFAKKLLQDAKVSVSPGIGFGDYGDDHVRFALIENRDRLRQAVRGIKAMFRADG 399 (412)
T ss_dssp ---EECCTTT-GG-GCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHHHHTT
T ss_pred ---EEcCCcc-CC-CCHHHHHHHHHHHCCEEEeCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHhcC
Confidence 5553110 00 02556666766778999999999974 689999999999999999999999998754
No 17
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=99.93 E-value=5.5e-26 Score=200.91 Aligned_cols=198 Identities=21% Similarity=0.395 Sum_probs=145.7
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCcccccccc--CCccCEEEEccCccccCCCCceEEEEEe-cCCCccccccchh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVF--GSIVPVLTLGSISKRWIVPGWRLGWLVT-SDPNGILQDLGVA 77 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~--~~~~~~i~~~s~sK~~~~~G~R~G~~~~-~~~~~~~~~~~~~ 77 (233)
++|+++|++||++||+||+|.++.+++ .+.++..+ +..++++++.|+||.|+++|+|+||+++ ++ ++++. +
T Consensus 224 ~~i~~l~~~~~~~li~De~~~~~~~~g-~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~riG~~~~~~~--~l~~~---l 297 (447)
T 3b46_A 224 TTLGNICVKHNVVIISDEVYEHLYFTD-SFTRIATLSPEIGQLTLTVGSAGKSFAATGWRIGWVLSLNA--ELLSY---A 297 (447)
T ss_dssp HHHHHHHHHTTCEEEEECTTTTCBCSS-CCCCGGGSCHHHHTTEEEEEEHHHHTTCTTSCCEEEECSCH--HHHHH---H
T ss_pred HHHHHHHHHcCcEEEEeccchhcccCC-CCcCHHHcCCCCCCcEEEEecCchhcCCcchhhEEEEeCCH--HHHHH---H
Confidence 368999999999999999999999887 43455544 2357899999999999999999999999 65 34421 1
Q ss_pred hhhhhhhHHhhhhhhhhccCcchHHHHHHHHhhhc-HHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEe
Q 047983 78 FFHSISLNMRMDDYLLLSESVYTTVGAVPQILEKT-EEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYC 156 (233)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~ 156 (233)
........++.++..+ .++...++.. .+++++++++.++++++.+.+.|+++ ++.. ..|++|+|+|
T Consensus 298 --------~~~~~~~~~~~~~~~~-~a~~~aL~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~~~g~~~~-- 364 (447)
T 3b46_A 298 --------AKAHTRICFASPSPLQ-EACANSINDALKIGYFEKMRQEYINKFKIFTSIFDEL-GLPY-TAPEGTYFVL-- 364 (447)
T ss_dssp --------HHHHHHHTSSCCHHHH-HHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHH-TCCE-ECCSBSSEEE--
T ss_pred --------HHHHhhccCCCChHHH-HHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHHHHHC-CCee-cCCCeeEEEE--
Confidence 2222333344433333 4444444433 25688999999999999999999887 5553 6789999999
Q ss_pred cCCCcccccccccccC-C---------CCChHHHHHHHHhccCEEEECCcccCC-------CCcEEEEeecCHHHHHHHH
Q 047983 157 GSEDKCLLKLNYSLLE-G---------INSDTEFALKLAKEESIIVLPGITVGL-------KDWLRITFAVEPSAFEIGL 219 (233)
Q Consensus 157 ~~~~~~~~~~~~~~~~-~---------~~~~~~~~~~ll~~~gi~v~pg~~f~~-------~~~~Rl~~~~~~~~l~~~~ 219 (233)
++++....+ + ..++.+++.++++++||.+.||+.|+. .+++|++++.+++++++++
T Consensus 365 -------~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~iRls~~~~~e~l~~~~ 437 (447)
T 3b46_A 365 -------VDFSKVKIPEDYPYPEEILNKGKDFRISHWLINELGVVAIPPTEFYIKEHEKAAENLLRFAVCKDDAYLENAV 437 (447)
T ss_dssp -------EECTTCCCCTTCCCCGGGSSSCHHHHHHHHHHHHTCEECBCGGGGSCGGGGGGGTTEEEEECCSCHHHHHHHH
T ss_pred -------EecccccCccccccccccccCCCHHHHHHHHHHhCCEEEECchHhCCCCccCCCCCEEEEEEeCCHHHHHHHH
Confidence 544321000 0 113456777777789999999999964 5899999999999999999
Q ss_pred HHHHH
Q 047983 220 GRMKA 224 (233)
Q Consensus 220 ~~l~~ 224 (233)
++|.+
T Consensus 438 ~~l~~ 442 (447)
T 3b46_A 438 ERLKL 442 (447)
T ss_dssp HHGGG
T ss_pred HHHHH
Confidence 99976
No 18
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=99.93 E-value=4.2e-25 Score=191.06 Aligned_cols=201 Identities=20% Similarity=0.432 Sum_probs=148.5
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCC-ccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGS-IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|+++|++||+++|+||+|+++.+++..+.++..++. .++++++.|+||.++++|+|+||+++++ .+++. +
T Consensus 183 ~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--~~~~~---l-- 255 (389)
T 1gd9_A 183 EEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAPS--WIIER---M-- 255 (389)
T ss_dssp HHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEESTTTTTCGGGCCEEEECCH--HHHHH---H--
T ss_pred HHHHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhccCCCCCEEEEecChhhcCCcccceEEEEECH--HHHHH---H--
Confidence 36899999999999999999999987654445555543 5789999999999999999999999986 34421 1
Q ss_pred hhhhhHHhhhhhhhhccCcchHHHHHHHHhhhc-HHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecC
Q 047983 80 HSISLNMRMDDYLLLSESVYTTVGAVPQILEKT-EEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGS 158 (233)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~ 158 (233)
.........+.++..+ .+....++.. .++++++.++.++++++.+.+.|+++ ++.. ..|++|+|+|
T Consensus 256 ------~~~~~~~~~~~~~~~~-~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~~~~~~~~---- 322 (389)
T 1gd9_A 256 ------VKFQMYNATCPVTFIQ-YAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEM-GLPT-VKPKGAFYIF---- 322 (389)
T ss_dssp ------HHHHTTTTCSCCHHHH-HHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCC-CCCCBTTEEC----
T ss_pred ------HHHHhhhccCCCHHHH-HHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHc-CCee-cCCCeeeEEE----
Confidence 1222222233333333 4444444432 22388999999999999999999887 5654 6788999999
Q ss_pred CCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC--CCcEEEEeecCHHHHHHHHHHHHHHHHHHh
Q 047983 159 EDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL--KDWLRITFAVEPSAFEIGLGRMKAFYYRHA 230 (233)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~~Rl~~~~~~~~l~~~~~~l~~~l~~~~ 230 (233)
++++.. +. +..++..++++++||.+.||+.|+. .+++|++++.+++++++++++|.+++++.+
T Consensus 323 -----~~~~~~---~~-~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~i~~~l~~l~~~~~~~~ 387 (389)
T 1gd9_A 323 -----PRIRDT---GL-TSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYATAYEKLEEAMDRMERVLKERK 387 (389)
T ss_dssp -----CBCGGG---TC-CHHHHHHHHHHHTCEECEEGGGGCGGGTTBEEEECCSCHHHHHHHHHHHHHHHHHTT
T ss_pred -----EeccCC---CC-CHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHhcc
Confidence 555320 11 3555666655588999999999974 689999999999999999999999987654
No 19
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.93 E-value=2.1e-25 Score=195.71 Aligned_cols=200 Identities=20% Similarity=0.344 Sum_probs=149.6
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHS 81 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~ 81 (233)
+|+++|++||++||+||+|+++.+++..+.++..++..++++++.|+||.|+ +|+|+||+++++ ++++. +
T Consensus 212 ~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~-~G~r~G~~~~~~--~~~~~---l---- 281 (425)
T 1vp4_A 212 ALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLLNTFSKVLA-PGLRIGMVAGSK--EFIRK---I---- 281 (425)
T ss_dssp HHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHHHHCTTTEEEEEESTTTTC-GGGCEEEEECCH--HHHHH---H----
T ss_pred HHHHHHHHcCCEEEEECCCccccCCCCCCcCHHHhCCCCCEEEEeccccccc-cccceEEEeeCH--HHHHH---H----
Confidence 6899999999999999999999987765556666666678999999999999 999999999986 44421 1
Q ss_pred hhhHHhhhhhhhhccCcchHHHHHHHHhhhc-HHHHHHHHHHHHHHHHHHHHHHhhc-CC---CcccccCCCccEEEEEe
Q 047983 82 ISLNMRMDDYLLLSESVYTTVGAVPQILEKT-EEEFFSKITDILREAADICCDRLKE-IP---CITCPKKPEGSMFVMYC 156 (233)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~l~~~L~~-~~---~~~~~~~~~~g~~~~~~ 156 (233)
.......+++.++..+ .++...++.. .++++++.++.++++++.+.+.|++ ++ ++.. ..|.+|+|+|
T Consensus 282 ----~~~~~~~~~~~~~~~~-~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~-~~~~~g~~~~-- 353 (425)
T 1vp4_A 282 ----VQAKQSADLCSPAITH-RLAARYLERYDLLEQLKPTIELYRRKRTVMLNALEEYFSDIPGVKW-VKSEGGLFIW-- 353 (425)
T ss_dssp ----HHHHHHHHSSCCHHHH-HHHHHHHHHSCHHHHTHHHHHHHHHHHHHHHHHHHHHSTTSTTCEE-CCCSBSSEEE--
T ss_pred ----HHHhhhhcCCCCHHHH-HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEE-ecCCccEEEE--
Confidence 2222222333333333 4444555443 4678899999999999999999987 45 4553 5688999999
Q ss_pred cCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC----CCcEEEEeec-CHHHHHHHHHHHHHHHHHHhh
Q 047983 157 GSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL----KDWLRITFAV-EPSAFEIGLGRMKAFYYRHAK 231 (233)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~----~~~~Rl~~~~-~~~~l~~~~~~l~~~l~~~~~ 231 (233)
++++. +. +..++...++ ++||.+.||+.|+. .+++|++++. +++++++++++|.+++++..+
T Consensus 354 -------~~~~~----~~-~~~~l~~~l~-~~gi~v~~g~~f~~~~~~~~~iRis~~~~~~e~i~~~l~~l~~~l~~~~~ 420 (425)
T 1vp4_A 354 -------LTLPE----GF-DTWEMFEYAK-RKKVFYVPGRVFKVYDEPSPSMRLSFCLPPDEKIVEGIKRLREVVLEYGK 420 (425)
T ss_dssp -------EECCT----TC-CTTTTHHHHH-HHTEECEEGGGGCTTCCCCSEEEEECSSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred -------EEcCC----CC-CHHHHHHHHH-HCCCEEECchhhcCCCCCCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 55542 11 2445555555 45999999999963 5899999997 799999999999999988765
Q ss_pred c
Q 047983 232 K 232 (233)
Q Consensus 232 ~ 232 (233)
+
T Consensus 421 ~ 421 (425)
T 1vp4_A 421 E 421 (425)
T ss_dssp H
T ss_pred h
Confidence 4
No 20
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=99.93 E-value=2.8e-25 Score=191.83 Aligned_cols=200 Identities=18% Similarity=0.238 Sum_probs=151.9
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCC--ccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGS--IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
+|+++|++||+++|+||+|+++.+++..+.++..+.. .++++++.|+||.++++|+|+||++++++ ++.+. +
T Consensus 184 ~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~~~~~~-~~~~~---~-- 257 (391)
T 3dzz_A 184 RIAELCAKHQVLLISDEIHGDLVLTDEDITPAFTVDWDAKNWVVSLISPSKTFNLAALHAACAIIPNP-DLRAR---A-- 257 (391)
T ss_dssp HHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEEEECCSH-HHHHH---H--
T ss_pred HHHHHHHHCCCEEEEecccccccCCCCCceehhhcCccccCcEEEEEeChhhccccchhheEEEECCH-HHHHH---H--
Confidence 6899999999999999999999988766666666653 57899999999999999999999999842 33321 1
Q ss_pred hhhhhHHhhhhhhh-hccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhc-CCCcccccCCCccEEEEEec
Q 047983 80 HSISLNMRMDDYLL-LSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKE-IPCITCPKKPEGSMFVMYCG 157 (233)
Q Consensus 80 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~g~~~~~~~ 157 (233)
........ .+.++..+.++.+.+ .. ..+++++.++.++++++.+.+.|++ ++++.. ..|.+++++|
T Consensus 258 ------~~~~~~~~~~~~~~~~~~a~~~~l-~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~~~~~~~~~--- 325 (391)
T 3dzz_A 258 ------EESFFLAGIGEPNLLAIPAAIAAY-EE-GHDWLRELKQVLRDNFAYAREFLAKEVPEVKV-LDSNASYLAW--- 325 (391)
T ss_dssp ------HHHHHHHTCSSCCTTHHHHHHHHH-HH-CHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEE-CCCCBSSEEE---
T ss_pred ------HHHHHhhccCCCCHHHHHHHHHHH-hc-cHHHHHHHHHHHHHHHHHHHHHHHhhCCCcEE-eccCceEEEE---
Confidence 22221112 233333332333343 32 4677899999999999999999998 888875 7899999999
Q ss_pred CCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC--CCcEEEEeecCHHHHHHHHHHHHHHHHHH
Q 047983 158 SEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL--KDWLRITFAVEPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~~Rl~~~~~~~~l~~~~~~l~~~l~~~ 229 (233)
+.++.. +. +..++..++++++||.+.||+.|+. .+++|++++.+++++++++++|.++++++
T Consensus 326 ------~~~~~~---~~-~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~~~~i~~~l~~l~~~l~~~ 389 (391)
T 3dzz_A 326 ------VDISAL---GM-NAEDFCKYLREKTGLIISAGNGYRGNGHEFVRINLACPKELVIDGMQRLKQGVLNL 389 (391)
T ss_dssp ------EECGGG---CS-CHHHHHHHHHHHHCEECEESGGGCTTGGGEEEEECCSCHHHHHHHHHHHHHHHHTC
T ss_pred ------Eehhhc---CC-CHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHHHHh
Confidence 555421 11 3556666665688999999999986 48999999999999999999999998764
No 21
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=99.93 E-value=1.2e-25 Score=195.71 Aligned_cols=196 Identities=19% Similarity=0.346 Sum_probs=147.6
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccC-CccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFG-SIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
+|+++|++||+++|+||+|.++.+++..+.++..+. ..++++++.|+||.|+++|+|+||+++++ ++++. +
T Consensus 191 ~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~--~~~~~---~--- 262 (410)
T 3e2y_A 191 VIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGKTFSVTGWKLGWSIGPA--HLIKH---L--- 262 (410)
T ss_dssp HHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEEHHHHSSCGGGCCEEEECCH--HHHHH---H---
T ss_pred HHHHHHHHcCcEEEEEhhhhhcccCCCCCCCHHHcCCccCeEEEEecchhhcCCCCceEEEEEECH--HHHHH---H---
Confidence 689999999999999999999999886666666554 35789999999999999999999999987 34421 1
Q ss_pred hhhhHHhhhhhhhhccCcchHHHHHHHHhhh------cHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEE
Q 047983 81 SISLNMRMDDYLLLSESVYTTVGAVPQILEK------TEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVM 154 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~ 154 (233)
........++.++..+ .++...++. ...+++++.++.++++++.+.+.|+++ ++.. ..|++|+|+|
T Consensus 263 -----~~~~~~~~~~~~~~~~-~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~~~~~~~~ 334 (410)
T 3e2y_A 263 -----QTVQQNSFYTCATPLQ-AALAEAFWIDIKRMDDPECYFNSLPKELEVKRDRMVRLLNSV-GLKP-IVPDGGYFII 334 (410)
T ss_dssp -----HHHHHTTTCCCCHHHH-HHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHTT-TCEE-EBCSBSSEEE
T ss_pred -----HHHHHhhccCCChHHH-HHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHHHHC-CCee-cCCCccEEEE
Confidence 2222222333333333 444444432 235688999999999999999999988 6654 6789999999
Q ss_pred EecCCCcccccccccccC-CC-------CChHHHHHHHHhccCEEEECCcccCC-------CCcEEEEeecCHHHHHHHH
Q 047983 155 YCGSEDKCLLKLNYSLLE-GI-------NSDTEFALKLAKEESIIVLPGITVGL-------KDWLRITFAVEPSAFEIGL 219 (233)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~-~~-------~~~~~~~~~ll~~~gi~v~pg~~f~~-------~~~~Rl~~~~~~~~l~~~~ 219 (233)
+.++ ... +. .++.+++.++++++||.+.||+.|+. .+++|++++.+++++++++
T Consensus 335 ---------~~~~--~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~~~e~l~~~l 403 (410)
T 3e2y_A 335 ---------ADVS--SLGADLSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSKSKPHFEKLVRFCFIKKDSTLDAAE 403 (410)
T ss_dssp ---------EECG--GGCCCCTTCCSSCCHHHHHHHHHHHHHSEECEEGGGGSCTTTHHHHTTEEEEECCCCHHHHHHHH
T ss_pred ---------EEch--hhhcccccccccccCHHHHHHHHHHHcCEEEeCchhhCCCCCCCCCCCEEEEEEcCCHHHHHHHH
Confidence 4432 211 11 11347778888899999999999963 5899999999999999999
Q ss_pred HHHHH
Q 047983 220 GRMKA 224 (233)
Q Consensus 220 ~~l~~ 224 (233)
++|.+
T Consensus 404 ~~l~~ 408 (410)
T 3e2y_A 404 EIFRA 408 (410)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 99975
No 22
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=99.93 E-value=5.9e-25 Score=193.28 Aligned_cols=202 Identities=19% Similarity=0.308 Sum_probs=148.9
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCC----------ccCEEEEccCccccCCCCceEEEEEecCCCccc
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGS----------IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGIL 71 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~----------~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~ 71 (233)
+|+++|++||++||+||+|.++.+++..+.++..+.. .++++++.|+||.|+++|+|+||++++++ .+
T Consensus 215 ~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~i~i~s~sK~~g~~G~r~G~~~~~~~-~~- 292 (435)
T 3piu_A 215 LLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDD-MV- 292 (435)
T ss_dssp HHHHHHHHHTCEEEEECTTGGGCCSSSCCCCHHHHHHC-------CGGGGEEEEEESSSSSCCGGGCEEEEEESCH-HH-
T ss_pred HHHHHHHHcCCEEEEeccccccccCCCCCcCHHHhccccccccccCCCCCEEEEEeeecccCCCceeEEEEEeCCH-HH-
Confidence 6889999999999999999999988766555544432 57899999999999999999999999752 12
Q ss_pred cccchhhhhhhhhHHhhhhhhh-hccCcchHHHHHHHHhhhcH--HHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCC
Q 047983 72 QDLGVAFFHSISLNMRMDDYLL-LSESVYTTVGAVPQILEKTE--EEFFSKITDILREAADICCDRLKEIPCITCPKKPE 148 (233)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~ 148 (233)
. ..+..... .+.++..+ .+++.++.... ++++++.++.++++++.+.+.|+++ ++.. ..++
T Consensus 293 -----~--------~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~~ 356 (435)
T 3piu_A 293 -----V--------AAATKMSSFGLVSSQTQ-HLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKS-GISC-LNGN 356 (435)
T ss_dssp -----H--------HHHHHHGGGSCCCHHHH-HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-TCEE-CCCC
T ss_pred -----H--------HHHHHHhhcCCCCHHHH-HHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcc-cCCC
Confidence 2 22222222 22222333 55555554432 4578889999999999999999987 5654 6788
Q ss_pred ccEEEEEecCCCcccccccccccCC-CCChHHHHHHHHhccCEEEECCcccCC--CCcEEEEeec-CHHHHHHHHHHHHH
Q 047983 149 GSMFVMYCGSEDKCLLKLNYSLLEG-INSDTEFALKLAKEESIIVLPGITVGL--KDWLRITFAV-EPSAFEIGLGRMKA 224 (233)
Q Consensus 149 ~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~~Rl~~~~-~~~~l~~~~~~l~~ 224 (233)
+|+|+| +.++...... ..+..++..++++++||.+.||+.|+. .+++|++++. +++++++++++|.+
T Consensus 357 ~g~~~~---------~~l~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~e~i~~~l~~l~~ 427 (435)
T 3piu_A 357 AGLFCW---------VDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDLAMQRLKA 427 (435)
T ss_dssp SSSEEE---------EECGGGSSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSTTEEEEECSSSCHHHHHHHHHHHHH
T ss_pred eeEEEE---------EEcccccccCCchhHHHHHHHHHHHCCEEEeCCcccCCCCCCEEEEEeeCCCHHHHHHHHHHHHH
Confidence 899999 5543211000 001345666677777999999999975 6899999997 99999999999999
Q ss_pred HHHHHh
Q 047983 225 FYYRHA 230 (233)
Q Consensus 225 ~l~~~~ 230 (233)
++++..
T Consensus 428 ~l~~~~ 433 (435)
T 3piu_A 428 FVGEYY 433 (435)
T ss_dssp HHHHHC
T ss_pred HHHHHh
Confidence 998764
No 23
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=99.93 E-value=2e-25 Score=194.66 Aligned_cols=196 Identities=18% Similarity=0.267 Sum_probs=147.1
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccC-CccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFG-SIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
+|+++|++||++||+||+|+++.+++ .+.++..+. ..++++++.|+||.++++|+|+||+++++ ++++. +
T Consensus 205 ~l~~~~~~~~~~li~De~~~~~~~~g-~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~--~~~~~---l--- 275 (404)
T 2o1b_A 205 EAIAKFKGTDTKIVHDFAYGAFGFDA-KNPSILASENGKDVAIEIYSLSKGYNMSGFRVGFAVGNK--DMIQA---L--- 275 (404)
T ss_dssp HHHHHHTTSSCEEEEECTTTTCBSSS-CCCCGGGSTTHHHHEEEEEESTTTTTCGGGCCEEEEECH--HHHHH---H---
T ss_pred HHHHHHHHcCCEEEEEccchhcccCC-CCCChhhcCCCCCCEEEEEecchhccCchhheEeEecCH--HHHHH---H---
Confidence 68999999999999999999998876 334454443 34678999999999999999999999876 34421 1
Q ss_pred hhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCCC
Q 047983 81 SISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSED 160 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~ 160 (233)
.........+.++..+ .++...++.. ++++++.++.++++++.+.+.|+++ ++.. ..|++|+|+|
T Consensus 276 -----~~~~~~~~~~~~~~~~-~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~~~g~~~~------ 340 (404)
T 2o1b_A 276 -----KKYQTHTNAGMFGALQ-DAAIYALNHY-DDFLEEQSNVFKTRRDRFEAMLAKA-DLPF-VHAKGGIYVW------ 340 (404)
T ss_dssp -----HHHHHHHCCCCCHHHH-HHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHT-TCCE-ECCCBSSEEE------
T ss_pred -----HHHHhhccCCCCHHHH-HHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHhc-CCee-cCCCcceEEE------
Confidence 2222222233333333 4444444333 6789999999999999999999887 5553 6788999999
Q ss_pred cccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC--CCcEEEEeecCHHHHHHHHHHHHHHHHHH
Q 047983 161 KCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL--KDWLRITFAVEPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~~Rl~~~~~~~~l~~~~~~l~~~l~~~ 229 (233)
++++. +. ++.+++.++++++||.+.||+.|+. .+++|++++.+++++++++++|.++++++
T Consensus 341 ---~~~~~----~~-~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~~~e~l~~~l~~l~~~l~~~ 403 (404)
T 2o1b_A 341 ---LETPP----GY-DSEQFEQFLVQEKSILVAPGKPFGENGNRYVRISLALDDQKLDEAAIRLTELAYLY 403 (404)
T ss_dssp ---EECCT----TC-CHHHHHHHHHHHHCEECEESGGGCGGGTTEEEEECCSCTTHHHHHHHHHHGGGGGG
T ss_pred ---EeCCC----CC-CHHHHHHHHHHHCCEEEeCchhhCcCCCCeEEEEEcCCHHHHHHHHHHHHHHHHhh
Confidence 55542 12 3566677777778999999999975 68999999998889999999999887654
No 24
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=99.93 E-value=5.3e-25 Score=189.60 Aligned_cols=195 Identities=19% Similarity=0.361 Sum_probs=148.1
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCC--ccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGS--IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
+|+++|++||+++|+||+|.++.+++..+.++..+.. .++++++.|+||.++++|+|+||++++++ .+.
T Consensus 180 ~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~-~~~-------- 250 (383)
T 3kax_A 180 KLGSLCTKYNVIVVADEIHSDIIYADHTHTPFASLSEELAARTITCMAPSKTFNIAGLQASIIIIPNE-KLR-------- 250 (383)
T ss_dssp HHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCH-HHH--------
T ss_pred HHHHHHHHCCCEEEEEccccccccCCCCceeHhhcCccccCcEEEEEEChhhccCcchhheEEEeCCH-HHH--------
Confidence 5788899999999999999999998766666766654 48899999999999999999999998642 233
Q ss_pred hhhhhHHhhhhhhh-hc-cCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhc-CCCcccccCCCccEEEEE
Q 047983 80 HSISLNMRMDDYLL-LS-ESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKE-IPCITCPKKPEGSMFVMY 155 (233)
Q Consensus 80 ~~~~~~~~~~~~~~-~~-~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~g~~~~~ 155 (233)
..+..... .. .++++.. .+....++. ..+++++.++.++++++.+.+.|++ ++++.. ..|++++++|
T Consensus 251 ------~~~~~~~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~~~~~~~~~- 321 (383)
T 3kax_A 251 ------QAFTSIQYRQGFHGLNIFAYTAMQSAYTE-CNDWLNEIRFYIEDNAKFACEYIKDHIPTLSV-MKPEGSFLLW- 321 (383)
T ss_dssp ------HHHHHHHHHTTCCCCCHHHHHHHHHHTTT-CHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEE-CCCSBSSEEE-
T ss_pred ------HHHHHHHhhcccCCCCHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHHHHHhhCCCceE-ecCCceEEEE-
Confidence 22222211 11 1233333 333333432 4678899999999999999999988 788775 6899999999
Q ss_pred ecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC--CCcEEEEeecCHHHHHHHHHHHHHHH
Q 047983 156 CGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL--KDWLRITFAVEPSAFEIGLGRMKAFY 226 (233)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~~Rl~~~~~~~~l~~~~~~l~~~l 226 (233)
+.++.. +. +..++..++++++||.+.||+.|+. .+++|++++.+++++++++++|.+++
T Consensus 322 --------~~~~~~---~~-~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~i~~~l~~l~~~l 382 (383)
T 3kax_A 322 --------IDCSAL---NL-SQDERTKLLEEKGKIIVEPGEKYGLGGEEHIGINIGCPRSVLEEILNRLRHTF 382 (383)
T ss_dssp --------EECGGG---CC-CHHHHHHHHHHTSCEECEESGGGCTTCTTEEEEECSSCHHHHHHHHHHHHHHH
T ss_pred --------EEcccc---CC-CHHHHHHHHHhhCCEEeECchhhcCCCCCeEEEEEcCCHHHHHHHHHHHHHHh
Confidence 555421 11 3556666666688999999999986 58999999999999999999998876
No 25
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=99.93 E-value=1.8e-25 Score=192.49 Aligned_cols=196 Identities=22% Similarity=0.408 Sum_probs=148.1
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHS 81 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~ 81 (233)
+|+++|++||++||+||+|.++.+++ ..++ .+..++++++.|+||.++++|+|+||+++++ ++++. +
T Consensus 178 ~i~~la~~~~~~li~De~~~~~~~~~--~~~~--~~~~~~~i~~~s~sK~~~~~G~r~G~v~~~~--~l~~~---~---- 244 (375)
T 3op7_A 178 ELVEIASEVGAYILSDEVYRSFSELD--VPSI--IEVYDKGIAVNSLSKTYSLPGIRIGWVAANH--QVTDI---L---- 244 (375)
T ss_dssp HHHHHHHTTTCEEEEECCSCCCSSSC--CCCH--HHHCTTEEEEEESSSSSSCGGGCCEEEECCH--HHHHH---H----
T ss_pred HHHHHHHHcCCEEEEEcccccccccC--CCch--hhhcCCEEEEeEChhhcCCcccceEEEEeCH--HHHHH---H----
Confidence 68999999999999999999988762 2222 2335778999999999999999999999965 34421 1
Q ss_pred hhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCCCc
Q 047983 82 ISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSEDK 161 (233)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~ 161 (233)
.........+.++..+..+.. .++ ..++++++.++.++++++.+.+.|++.+++.. ..|.++++.|
T Consensus 245 ----~~~~~~~~~~~~~~~~~~~~~-~l~-~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~~~------- 310 (375)
T 3op7_A 245 ----RDYRDYTMICAGVFDDLVAQL-ALA-HYQEILERNRHILEENLAILDQWIEEEPLVSY-IRPAVVSTSF------- 310 (375)
T ss_dssp ----TTTGGGTTSCCCHHHHHHHHH-HHH-THHHHHHHHHHHHHHHHHHHHHHHHHCTTEEE-CCCSSSSCEE-------
T ss_pred ----HHHHhhhccCCCcHHHHHHHH-HHh-ccHHHHHHHHHHHHHHHHHHHHHHhhCCCceE-ecCCCeEEEe-------
Confidence 222222223333333323333 332 45678899999999999999999988777764 6788999888
Q ss_pred ccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeecCHHHHHHHHHHHHHHHHHHhh
Q 047983 162 CLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAVEPSAFEIGLGRMKAFYYRHAK 231 (233)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~~~~~l~~~~~~l~~~l~~~~~ 231 (233)
+.++.+. +..+++.++++++||.+.||+.|+..+++|++++.+.+++++++++|.+++++..+
T Consensus 311 --~~~~~~~-----~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~i~~~l~~l~~~l~~~~~ 373 (375)
T 3op7_A 311 --VKIAVDM-----PMEDFCLQLLQEHGVLLVPGNRFERDGYVRLGFACEQETLIKGLEKLSQFLRRFDK 373 (375)
T ss_dssp --EEECCSS-----CHHHHHHHHHHHHCEECEEGGGGTCTTEEEECCCSCHHHHHHHHHHHHHHHGGGC-
T ss_pred --EEcCCCC-----CHHHHHHHHHHhCCEEEeChhhhCCCCeEEEEecCCHHHHHHHHHHHHHHHHHHhh
Confidence 6565322 46777788888999999999999988999999999889999999999999987654
No 26
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=99.93 E-value=3.6e-25 Score=191.72 Aligned_cols=191 Identities=22% Similarity=0.338 Sum_probs=142.7
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccc----cC-CccCEEEEccCccccCCCCceEEEEEecCCCccccccch
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGV----FG-SIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGV 76 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~----~~-~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~ 76 (233)
+|+++|++||++||+||+|.++.+++..+.+... +. ..++++++.|+||.|+++|+|+||+++++ ++++.
T Consensus 192 ~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--~~~~~--- 266 (396)
T 3jtx_A 192 EVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLMFTSLSKRSNVPGLRSGFVAGDA--ELLKN--- 266 (396)
T ss_dssp HHHHHHHHHCCEEEEECTTTTCCSTTCCCCCHHHHHHHTTCCCTTEEEEEESTTTSSCGGGCCEEEEECH--HHHHH---
T ss_pred HHHHHHHHcCCEEEEEccccccccCCCCCchHHhhhhhcccccCcEEEEeccccccCCcccceEEEEeCH--HHHHH---
Confidence 5899999999999999999999988743333221 11 35789999999999999999999999876 34421
Q ss_pred hhhhhhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEe
Q 047983 77 AFFHSISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYC 156 (233)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~ 156 (233)
+ .......+.+.++..+ .+....++. .+++.+.++.++++++.+.+.|+++ +. +..|.+|+|+|
T Consensus 267 ~--------~~~~~~~~~~~~~~~~-~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~--~~-~~~~~~~~~~~-- 330 (396)
T 3jtx_A 267 F--------LLYRTYHGSAMSIPVQ-RASIAAWDD--EQHVIDNRRLYQEKFERVIPILQQV--FD-VKLPDASFYIW-- 330 (396)
T ss_dssp H--------HHHHHHHTCCCCHHHH-HHHHHHHHC--CHHHHHHHHHHHHHHHHHHHHHTTT--SC-CCCCSSSSEEE--
T ss_pred H--------HHHHhhcccCCCHHHH-HHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHhc--CC-ccCCCeeEEEE--
Confidence 1 2222222233333333 444444432 5688999999999999999999885 22 35788999999
Q ss_pred cCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC--------CCcEEEEeecCHHHHHHHHHHHHHHH
Q 047983 157 GSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL--------KDWLRITFAVEPSAFEIGLGRMKAFY 226 (233)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--------~~~~Rl~~~~~~~~l~~~~~~l~~~l 226 (233)
+.++. .++.+++.++++++||.+.||+.|+. .+++|++++.+++++++++++|.+++
T Consensus 331 -------~~~~~------~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~~~~~iRis~~~~~~~i~~~l~~l~~~l 395 (396)
T 3jtx_A 331 -------LKVPD------GDDLAFARNLWQKAAIQVLPGRFLARDTEQGNPGEGYVRIALVADVATCVKAAEDIVSLY 395 (396)
T ss_dssp -------EECTT------SCHHHHHHHHHHHHCEECEEGGGGCCCCTTCCTTTTEEEEECCSCHHHHHHHHHHHHHHC
T ss_pred -------EECCC------CCHHHHHHHHHHHCCEEEeCChHhCCcccccCCCCCeEEEEEcCCHHHHHHHHHHHHHHh
Confidence 55542 13677777777888999999999974 48999999999999999999998764
No 27
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=99.93 E-value=1e-24 Score=189.39 Aligned_cols=198 Identities=23% Similarity=0.363 Sum_probs=147.5
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCc---cCEEEEccCccccCCCCceEEEEEecCCCccccccchhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSI---VPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAF 78 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~---~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~ 78 (233)
+|+++|++||++||+||+|+++.+++..+.++..++.+ ++++++.|+||.++ +|+|+||+++++ ++++. +
T Consensus 187 ~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~G~r~G~~~~~~--~~~~~---l- 259 (397)
T 2zyj_A 187 RLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYPGVIYLGSFSKVLS-PGLRVAFAVAHP--EALQK---L- 259 (397)
T ss_dssp HHHHHHHHHTCCEEEECTTTTCBCSSCCCCCHHHHHHHHTCCCEEEEEESTTTTC-GGGCCEEEECCH--HHHHH---H-
T ss_pred HHHHHHHHcCCEEEEeCCcccccCCCCCCCchhhhCcccCCCeEEEEeccccccc-ccceeEEEecCH--HHHHH---H-
Confidence 68999999999999999999999877555566666555 78999999999998 999999999986 44421 1
Q ss_pred hhhhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhc-CC-CcccccCCCccEEEEEe
Q 047983 79 FHSISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKE-IP-CITCPKKPEGSMFVMYC 156 (233)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~-~~~~~~~~~~g~~~~~~ 156 (233)
........++.++..+ .+....++....+++++.++.++++++.+.+.|++ ++ ++.. ..|.+|+|+|
T Consensus 260 -------~~~~~~~~~~~~~~~~-~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~g~~~-~~~~~g~~~~-- 328 (397)
T 2zyj_A 260 -------VQAKQGADLHTPMLNQ-MLVHELLKEGFSERLERVRRVYREKAQAMLHALDREVPKEVRY-TRPKGGMFVW-- 328 (397)
T ss_dssp -------HHHHHHHHSSCCHHHH-HHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTSEE-CCCSBSSEEE--
T ss_pred -------HHHHHhhcCCCCHHHH-HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEE-ccCCccEEEE--
Confidence 2222222233333333 44445554432278899999999999999999987 66 4653 5788999999
Q ss_pred cCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC----CCcEEEEeec-CHHHHHHHHHHHHHHHHHHh
Q 047983 157 GSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL----KDWLRITFAV-EPSAFEIGLGRMKAFYYRHA 230 (233)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~----~~~~Rl~~~~-~~~~l~~~~~~l~~~l~~~~ 230 (233)
++++. +. +..++..+++ ++||.+.||+.|+. .+++|++++. +++++++++++|.+++++..
T Consensus 329 -------~~~~~----~~-~~~~~~~~l~-~~gi~v~~g~~f~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~~~~ 394 (397)
T 2zyj_A 329 -------MELPK----GL-SAEGLFRRAL-EENVAFVPGGPFFANGGGENTLRLSYATLDREGIAEGVRRLGRALKGLL 394 (397)
T ss_dssp -------EECST----TC-CHHHHHHHHH-HTTEEEEESGGGCTTSCCTTEEEEECSSSCHHHHHHHHHHHHHHHHHHH
T ss_pred -------EEcCC----CC-CHHHHHHHHH-HCCCEEechHHhcCCCCCCCeEEEEcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 55542 11 3445555554 55999999999963 5899999997 69999999999999998764
No 28
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=99.93 E-value=5.9e-25 Score=189.79 Aligned_cols=195 Identities=19% Similarity=0.326 Sum_probs=147.4
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCC--ccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGS--IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
+|+++|++||+++|+||+|.++.+++..+.++..+.. .++++++.|+||.++++|+|+||++++++ .+.
T Consensus 188 ~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~-~~~-------- 258 (391)
T 4dq6_A 188 KLGDICLKHNVKIISDEIHSDIILKKHKHIPMASISKEFEKNTITCMAPTKTFNIAGLQSSYVVLPDE-KDY-------- 258 (391)
T ss_dssp HHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEECSHHHHTCGGGCCEEEECCSH-HHH--------
T ss_pred HHHHHHHHcCCEEEeeccccccccCCCCccCHHHcCccccCcEEEEEechhhccCcccceEEEEeCCH-HHH--------
Confidence 6889999999999999999999998766666766654 47899999999999999999999999762 232
Q ss_pred hhhhhHHhhhhhhh-h-ccCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhc-CCCcccccCCCccEEEEE
Q 047983 80 HSISLNMRMDDYLL-L-SESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKE-IPCITCPKKPEGSMFVMY 155 (233)
Q Consensus 80 ~~~~~~~~~~~~~~-~-~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~g~~~~~ 155 (233)
..+..... . ..+++... .+....+.. .++++++.++.++++++.+.+.|++ ++++.. ..|.+++++|
T Consensus 259 ------~~~~~~~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~~~~~~~~~- 329 (391)
T 4dq6_A 259 ------KLLDDAFTRIDIKRNNCFSLVATEASYNN-GESWLESFLEYLESNIDFAIKYINENMPKLKV-RKPEGTYLLW- 329 (391)
T ss_dssp ------HHHHHHHHHTTCCCCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEE-CCCSBSSEEE-
T ss_pred ------HHHHHHHHhhcCCCCCHHHHHHHHHHHhc-hHHHHHHHHHHHHHHHHHHHHHHHhhCCCCEe-cCCCccEEEE-
Confidence 22222211 1 11223332 333333332 3567899999999999999999988 788775 7899999999
Q ss_pred ecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC--CCcEEEEeecCHHHHHHHHHHHHHHH
Q 047983 156 CGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL--KDWLRITFAVEPSAFEIGLGRMKAFY 226 (233)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~~Rl~~~~~~~~l~~~~~~l~~~l 226 (233)
+.++.. +. +..++..++++++||.+.||+.|+. .+++|++++.+++++++++++|.+++
T Consensus 330 --------~~~~~~---~~-~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~~~~i~~~l~~l~~~l 390 (391)
T 4dq6_A 330 --------VDFSAL---GL-SDEELESILVQKGKVALNQGNSFGIGGSGYQRINLACPRSMLEEALIRIKNAI 390 (391)
T ss_dssp --------EECGGG---CC-CHHHHHHHHHHTTCEECEEGGGGCTTCTTEEEEECCSCHHHHHHHHHHHHHHH
T ss_pred --------EEhhhc---CC-CHHHHHHHHHHhCCEEeeCchhhCCCCCCeEEEEEcCCHHHHHHHHHHHHHHh
Confidence 555421 11 3556666666555999999999986 58999999999999999999999876
No 29
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=99.93 E-value=3.4e-25 Score=192.80 Aligned_cols=199 Identities=17% Similarity=0.143 Sum_probs=139.7
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCC-ccCEEEEccCccccCCCCceEEEEEecCCCccccccch-hhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGS-IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGV-AFF 79 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~-~~~ 79 (233)
+|+++|+++|++||+||+|.++.+++..+.++..++. .++++++.|+||.|+++|+|+||+++++ .+.+.... +
T Consensus 187 ~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~GlriG~~~~~~--~~~~~~~~~~-- 262 (400)
T 3asa_A 187 AIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCAIEINSFSKPLGFAGIRLGWTVIPQ--ELTYADGHFV-- 262 (400)
T ss_dssp HHHHHHHHTTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECCGGGTTTTCCCEEEECCT--TCBCTTSCBH--
T ss_pred HHHHHHHHcCCEEEEEchhhhhhcCCCCCCchhhCCCCCCceEEEecchhhcCCcchheeEEeeCh--hhccchhhhH--
Confidence 6889999999999999999998877644445555543 4679999999999999999999999987 34100000 1
Q ss_pred hhhhhHHhh---hhhhhh-ccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEE
Q 047983 80 HSISLNMRM---DDYLLL-SESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMY 155 (233)
Q Consensus 80 ~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~ 155 (233)
..+ .....+ +.++..+ .+....++.. ++++.++.++++++.+.+.|+++ ++.. ..|.+|+|+|
T Consensus 263 ------~~~~~~~~~~~~~~~~~~~~-~a~~~~l~~~---~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~~~~~~~~- 329 (400)
T 3asa_A 263 ------IQDWERFLSTTFNGASIPAQ-EAGVAGLSIL---PQLEAIHYYRENSDLLRKALLAT-GFEV-FGGEHAPYLW- 329 (400)
T ss_dssp ------HHHHHHHHHHHCCCCCHHHH-HHHHHHHHHT---TTCHHHHHHHHHHHHHHHHHHHT-TCEE-EECSSSSEEE-
T ss_pred ------HHHHHHHhccCccCCChHHH-HHHHHHhCcH---HHHHHHHHHHHHHHHHHHHHHHC-CCee-eCCCCceEEE-
Confidence 111 111112 2333333 4444444333 67888999999999999999887 5553 5677899999
Q ss_pred ecCCCccccc-ccccccCCCCChHHHHHHHHhccCEEEECCcccCC--CCcEEEEeecCHHHHHHHHHHHHHHHHHHh
Q 047983 156 CGSEDKCLLK-LNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL--KDWLRITFAVEPSAFEIGLGRMKAFYYRHA 230 (233)
Q Consensus 156 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~~Rl~~~~~~~~l~~~~~~l~~~l~~~~ 230 (233)
++ ++. +. ++.++..++++++||.+.||+.|+. .+++|+++..+++++++++++|.++++++.
T Consensus 330 --------~~~~~~----~~-~~~~~~~~l~~~~gv~v~~g~~f~~~~~~~iRis~~~~~e~i~~~l~~l~~~~~~~~ 394 (400)
T 3asa_A 330 --------VKPTQA----NI-SDRDLFDFFLREYHIAITPGIGFGRSGSGFVRFSSLGKREDILAACERLQMAPALQS 394 (400)
T ss_dssp --------EECCCT----TC-CTTTHHHHHHHHHSEECEEGGGGCGGGTTCEEEECCSCHHHHHHHHHHHHC------
T ss_pred --------EeccCC----CC-CHHHHHHHHHHhCCEEEeChhHhCCCCCCEEEEEeeCCHHHHHHHHHHHHHHHHhhh
Confidence 55 432 11 2446667777778999999999974 689999977789999999999999988764
No 30
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=99.93 E-value=1.3e-24 Score=188.98 Aligned_cols=200 Identities=23% Similarity=0.400 Sum_probs=148.2
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHS 81 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~ 81 (233)
+|+++|++||++||+||+|+++.+++..+.++..++..+++++++|+||.++ ||+|+||+++++ ++++. +
T Consensus 199 ~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~G~r~G~~~~~~--~~~~~---~---- 268 (407)
T 2zc0_A 199 ALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALDNEGRVIVAGTLSKVLG-TGFRIGWIIAEG--EILKK---V---- 268 (407)
T ss_dssp HHHHHHHHHTCEEEEECTTTTSBSSCSSCCCGGGGCSSCCEEEEEESTTTTC-TTSCCEEEECCH--HHHHH---H----
T ss_pred HHHHHHHHcCCEEEEECCCcccccCCCCCCChhhcCCCCCEEEEcccccccC-CCcceEEEecCH--HHHHH---H----
Confidence 7899999999999999999999887765556666666678999999999988 999999999976 34421 1
Q ss_pred hhhHHhhhhhhhhccCcchHHHHHHHHhhhc-HH-HHHHHHHHHHHHHHHHHHHHhhc-CCCcccccCCCccEEEEEecC
Q 047983 82 ISLNMRMDDYLLLSESVYTTVGAVPQILEKT-EE-EFFSKITDILREAADICCDRLKE-IPCITCPKKPEGSMFVMYCGS 158 (233)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~-~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~g~~~~~~~~ 158 (233)
.......+++.++..+ .++..+++.. .+ +++++.++.++++++.+.+.|++ ++++.. ..|.+|+|+|
T Consensus 269 ----~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~---- 338 (407)
T 2zc0_A 269 ----LMQKQPIDFCAPAISQ-YIALEYLKRGYFEKYHLEGALLGYKEKRDIMLKALENHLPNAEF-TKPIAGMFVM---- 338 (407)
T ss_dssp ----HHHHTTTTSSSCHHHH-HHHHHHHHTTHHHHHTTTTHHHHHHHHHHHHHHHHHHHCTTSCB-CCCSBSSEEE----
T ss_pred ----HHHHHhhcCCCCHHHH-HHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEE-ecCCCcEEEE----
Confidence 2222222223333333 4445555443 34 67888999999999999999987 666653 5688899999
Q ss_pred CCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC----CCcEEEEeec-CHHHHHHHHHHHHHHHHHHhh
Q 047983 159 EDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL----KDWLRITFAV-EPSAFEIGLGRMKAFYYRHAK 231 (233)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~----~~~~Rl~~~~-~~~~l~~~~~~l~~~l~~~~~ 231 (233)
++++. +. +..++...+++++||.+.||+.|+. .+++|++++. +++++++++++|.+++++..+
T Consensus 339 -----~~~~~----~~-~~~~l~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~~~~~ 406 (407)
T 2zc0_A 339 -----FFLPE----GA-DGISFANELMEREGVVVVPGKPFYTDESGKNAIRLNFSRPSKEEIPIGIKKLAKLYKEKFG 406 (407)
T ss_dssp -----EECST----TC-CHHHHHHHHHHHTCEECBCSGGGCSSSCCTTEEEEECSSSCTTHHHHHHHHHHHHHHHHC-
T ss_pred -----EEcCC----CC-CHHHHHHHHHHhCCeEEECchhccCCCCCCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 55532 12 3555666655555999999999863 5899999997 689999999999999987643
No 31
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=99.92 E-value=4.7e-25 Score=193.21 Aligned_cols=196 Identities=17% Similarity=0.276 Sum_probs=149.5
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCC--ccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGS--IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
+|+++|++||++||+||+|+++.+++..+.++..+.. .++++++.|+||.++++|+|+||++++++ ++.
T Consensus 218 ~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~~~~~~-~l~-------- 288 (421)
T 3l8a_A 218 KIAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQNE-SLR-------- 288 (421)
T ss_dssp HHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEEEECCSH-HHH--------
T ss_pred HHHHHHHHcCCEEEEEccccccccCCCCCccHHHcCchhcCcEEEEEeChhhccCchhheEeEEcCCH-HHH--------
Confidence 6899999999999999999999998876667766643 57899999999999999999999999842 233
Q ss_pred hhhhhHHhhhhhh-hhcc-CcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEe
Q 047983 80 HSISLNMRMDDYL-LLSE-SVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYC 156 (233)
Q Consensus 80 ~~~~~~~~~~~~~-~~~~-~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~ 156 (233)
..+.... ..+. ++++.. .+..+.++ ..++++++.++.++++++.+.+.|++++++.. ..|++++++|
T Consensus 289 ------~~~~~~~~~~~~~~~n~~~~~a~~aal~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~~-~~~~~~~~~~-- 358 (421)
T 3l8a_A 289 ------RKFQYRQLANNQHEVPTVGMIATQAAFQ-YGKPWLEELKTVIEGNIKLVIKELEAKTKIKV-MEPEGTYLVW-- 358 (421)
T ss_dssp ------HHHHHHHHHTTCSCCCHHHHHHHHHHHH-HCHHHHHHHHHHHHHHHHHHHHHHHHHCSCEE-ECCSBSSEEE--
T ss_pred ------HHHHHHHHhcccCCCCHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHHHHhCCCceE-eCCCeeEEEE--
Confidence 2222221 1111 233333 33333333 34678999999999999999999988767764 7899999999
Q ss_pred cCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC--CCcEEEEeecCHHHHHHHHHHHHHHHH
Q 047983 157 GSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL--KDWLRITFAVEPSAFEIGLGRMKAFYY 227 (233)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~~Rl~~~~~~~~l~~~~~~l~~~l~ 227 (233)
+.++.. +. +..++...+++++||.+.||+.|+. .+++|++++.+++++++++++|.++++
T Consensus 359 -------v~~~~~---~~-~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~i~~~l~~l~~~l~ 420 (421)
T 3l8a_A 359 -------LDFSAY---AI-AQPQLSEKLQNEAKVVLNDGAHFGKEGKYFARLNVATPKNTVQEALSRIISVFG 420 (421)
T ss_dssp -------EECGGG---TC-CTTHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHC-
T ss_pred -------Eecccc---CC-CHHHHHHHHHHhCCEEEECchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHHh
Confidence 544321 11 3556677777788999999999975 689999999999999999999998874
No 32
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=99.92 E-value=4.2e-25 Score=193.34 Aligned_cols=188 Identities=15% Similarity=0.086 Sum_probs=133.0
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCC--cccccccc-CCccCEEEEccCccccCCCCceEEEEEecC-CCccccccchh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNT--HFVPMGVF-GSIVPVLTLGSISKRWIVPGWRLGWLVTSD-PNGILQDLGVA 77 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~--~~~~~~~~-~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~-~~~~~~~~~~~ 77 (233)
+|+++|++||++||+||+|.+|.+++. ...++..+ ...+++|+++||||+|++||||+||+++.. .+++++ .+.
T Consensus 198 ~l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~l~GlRiG~~~~~~~~~~~~~--~~~ 275 (405)
T 3k7y_A 198 EIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFEEKNIAFSVCQSFSKNMSLYGERAGALHIVCKNQEEKK--IVF 275 (405)
T ss_dssp HHHHHHHHHCCEEEEEESCTTTSSSSTTGGGHHHHHHHTTTCCEEEEEECTTTSCCTTTTEEEEEEECSSHHHHH--HHH
T ss_pred HHHHHHHHCCeEEEEecCcccccCCCcccchHHHHHHHhcCCcEEEEeeCCccCCCccccceEEEEEeCCHHHHH--HHH
Confidence 689999999999999999999998642 22233333 335789999999999999999999987532 112332 111
Q ss_pred hhhhhhhHHhhhhhhh-hccCcchHH-HHHHHHhhhc-----HHHHHHHHHHHHHHHHHHHHHHhh----cCCC---ccc
Q 047983 78 FFHSISLNMRMDDYLL-LSESVYTTV-GAVPQILEKT-----EEEFFSKITDILREAADICCDRLK----EIPC---ITC 143 (233)
Q Consensus 78 ~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~l~~~-----~~~~~~~~~~~~~~~~~~l~~~L~----~~~~---~~~ 143 (233)
..+..... ...+++.+. .+++.++.+. +.++++.+++.+++||+.+.+.|+ +++. +..
T Consensus 276 --------~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~l~~~~~~~~~~R~~l~~~L~~~~~~~g~~~~~~~ 347 (405)
T 3k7y_A 276 --------NNLCFIVRKFYSSPVIHTNRILCQLLNNQNLKLNWIKELSQLSQRITNNRILFFNKLETYQKKYNLNYDWNV 347 (405)
T ss_dssp --------HHHHHHHHTTTSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCGGG
T ss_pred --------HHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCcc
Confidence 22222111 112333343 4555555442 346678888999999999999999 7632 553
Q ss_pred ccCCCccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec-CHHHHHHHHHHH
Q 047983 144 PKKPEGSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV-EPSAFEIGLGRM 222 (233)
Q Consensus 144 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~-~~~~l~~~~~~l 222 (233)
.+|+||||+| +.++ + +++.++ +++||.++||. |||++. +++++++++++|
T Consensus 348 -~~p~gg~f~~---------~~l~---------~-~~~~~L-~~~gV~v~p~~--------Ris~a~~~~~~i~~~~~~i 398 (405)
T 3k7y_A 348 -YKKQRGLFSF---------VPLL---------A-KIAEHL-KTHHIYIINNG--------RINVSGITKNNVDYIADKI 398 (405)
T ss_dssp -GSSCCSSEEE---------CGGG---------G-GGTTTT-TTTTEECCTTS--------EEEGGGCCTTHHHHHHHHH
T ss_pred -ccCCceEEEe---------cCCC---------H-HHHHHH-HHCCEeecCCC--------eEEEeccCHHHHHHHHHHH
Confidence 7899999999 4442 1 345555 89999999964 999986 889999999999
Q ss_pred HHHHHH
Q 047983 223 KAFYYR 228 (233)
Q Consensus 223 ~~~l~~ 228 (233)
.+++++
T Consensus 399 ~~~~~~ 404 (405)
T 3k7y_A 399 CLSLSQ 404 (405)
T ss_dssp HHHHHC
T ss_pred HHHHhh
Confidence 998763
No 33
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=99.92 E-value=2.4e-24 Score=185.25 Aligned_cols=192 Identities=24% Similarity=0.450 Sum_probs=144.7
Q ss_pred HHHHHHHcCcEEEEccccCccccCCCccccccccC-CccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhhh
Q 047983 3 IEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFG-SIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHS 81 (233)
Q Consensus 3 i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~ 81 (233)
|+++|++||++||+||+|+++.+++ .+.++..++ ..++++++.|+||.++++|+|+||+++++ ++++. +
T Consensus 175 l~~~~~~~~~~li~De~~~~~~~~g-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--~~~~~---~---- 244 (370)
T 2z61_A 175 IYEFAYENIPYIISDEIYNGLVYEG-KCYSAIEFDENLEKTILINGFSKLYAMTGWRIGYVISND--EIIEA---I---- 244 (370)
T ss_dssp HHHHHHHHCSEEEEECTTTTCBSSS-CCCCGGGTCTTCSSEEEEEESTTTTTCGGGCCEEEECCH--HHHHH---H----
T ss_pred HHHHHHHcCCEEEEEcchhhcccCC-CCcCHHHccCCCCcEEEEecChhccCCccceEEEEEECH--HHHHH---H----
Confidence 7899999999999999999998876 334555443 45789999999999999999999999987 44421 1
Q ss_pred hhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCCCc
Q 047983 82 ISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSEDK 161 (233)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~ 161 (233)
.........+.++..+ .++.+.++....+++++.++.++++++.+.+.|+++ ++.. ..|++|+|+|
T Consensus 245 ----~~~~~~~~~~~~~~~~-~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~~~~~~~~------- 310 (370)
T 2z61_A 245 ----LKLQQNLFISAPTISQ-YAALKAFEKETEREINSMIKEFDRRRRLVLKYVKDF-GWEV-NNPIGAYYVF------- 310 (370)
T ss_dssp ----HHHHHHHTSSSCHHHH-HHHGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCBC-CCCCBTTEEC-------
T ss_pred ----HHHHhhcccCCCHHHH-HHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHc-CCee-cCCCcceEEE-------
Confidence 2222222223333333 444455533136788999999999999999999887 6654 6788999999
Q ss_pred ccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC--CCcEEEEeecCHHHHHHHHHHHHHHHH
Q 047983 162 CLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL--KDWLRITFAVEPSAFEIGLGRMKAFYY 227 (233)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~~Rl~~~~~~~~l~~~~~~l~~~l~ 227 (233)
+.++ . +..++..++++++||.+.||+.|+. .+++|++++.+++++++++++|.++++
T Consensus 311 --~~~~--~-----~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~Ri~~~~~~~~i~~~~~~l~~~l~ 369 (370)
T 2z61_A 311 --PNIG--E-----DGREFAYKLLKEKFVALTPGIGFGSKGKNYIRISYANSYENIKEGLERIKEFLN 369 (370)
T ss_dssp --CBCS--S-----CHHHHHHHHHHHHCEECEEGGGGCGGGSSBEEEECCSCHHHHHHHHHHHHHHHC
T ss_pred --EecC--C-----CHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEeCCHHHHHHHHHHHHHHHh
Confidence 5443 1 2556666666688999999999975 689999999999999999999998874
No 34
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=99.92 E-value=6.3e-25 Score=191.65 Aligned_cols=201 Identities=23% Similarity=0.381 Sum_probs=148.5
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCC-ccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGS-IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|+++|++||++||+||+|.++.+++..+.++..++. .++++++.|+||.++++|+|+||+++++ ++++. +
T Consensus 183 ~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--~~~~~---l-- 255 (411)
T 2o0r_A 183 AAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDGMAERTITISSAAKMFNCTGWKIGWACGPA--ELIAG---V-- 255 (411)
T ss_dssp HHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHTTCTTTCEEEEECCH--HHHHH---H--
T ss_pred HHHHHHHHHcCCEEEEEccccccccCCCCCcChhhccCCCCCEEEEeechhhcCCccceEEEEeeCH--HHHHH---H--
Confidence 36899999999999999999999987755556655543 5789999999999999999999999976 44421 1
Q ss_pred hhhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCC
Q 047983 80 HSISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSE 159 (233)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~ 159 (233)
........++.++..+ .++...++.. .+++++.++.++++++++.+.|+++ ++.. ..|.+|+|+|
T Consensus 256 ------~~~~~~~~~~~~~~~~-~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~~~g~~~~----- 320 (411)
T 2o0r_A 256 ------RAAKQYLSYVGGAPFQ-PAVALALDTE-DAWVAALRNSLRARRDRLAAGLTEI-GFAV-HDSYGTYFLC----- 320 (411)
T ss_dssp ------HHHHHHHTSCCCTTHH-HHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHH-TCEE-CCCCBSSEEE-----
T ss_pred ------HHHHhhccCCCChHHH-HHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHHc-CCEe-cCCCeeEEEE-----
Confidence 2222333344444444 3444444333 6788999999999999999999886 5553 6788999999
Q ss_pred CcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC-------------CCcEEEEeecCHHHHHHHHHHHHHHH
Q 047983 160 DKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL-------------KDWLRITFAVEPSAFEIGLGRMKAFY 226 (233)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~-------------~~~~Rl~~~~~~~~l~~~~~~l~~~l 226 (233)
++++. ..+. ++.++..++++++||.+.||+.|.. .+++|++++.+++++++++++|.+++
T Consensus 321 ----~~~~~--~~~~-~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~~~~~~~~~~iRis~~~~~e~i~~~~~~l~~~~ 393 (411)
T 2o0r_A 321 ----ADPRP--LGYD-DSTEFCAALPEKVGVAAIPMSAFCDPAAGQASQQADVWNHLVRFTFCKRDDTLDEAIRRLSVLA 393 (411)
T ss_dssp ----EECGG--GTCC-CHHHHHHHHHHHHSEECEEGGGGSCCC--------CCGGGCEEEECCSCHHHHHHHHHHHGGGG
T ss_pred ----EecCC--CCCC-CHHHHHHHHHHhCCEEEcChhhhCCCccccccccccCCCCeEEEEecCCHHHHHHHHHHHHHHH
Confidence 55532 1111 3566677777788999999999832 47899999988999999999999887
Q ss_pred HHHh
Q 047983 227 YRHA 230 (233)
Q Consensus 227 ~~~~ 230 (233)
++..
T Consensus 394 ~~~~ 397 (411)
T 2o0r_A 394 ERPA 397 (411)
T ss_dssp C---
T ss_pred hccC
Confidence 6654
No 35
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=99.92 E-value=2.9e-25 Score=191.97 Aligned_cols=194 Identities=22% Similarity=0.371 Sum_probs=144.6
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccC-CccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFG-SIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
+|+++|++||++||+||+|+++.+++..+.++..+. ..++++++.|+||.++++|+|+||+++++ ++++. +
T Consensus 187 ~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--~~~~~---l--- 258 (386)
T 1u08_A 187 ALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAPA--PISAE---I--- 258 (386)
T ss_dssp HHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCGGGCCEEEECCH--HHHHH---H---
T ss_pred HHHHHHHHcCcEEEEEccccccccCCCCCcChhcccCccCcEEEEecchhhcCCcccceEEEEcCH--HHHHH---H---
Confidence 689999999999999999999998776555665553 35789999999999999999999999986 44421 1
Q ss_pred hhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCCC
Q 047983 81 SISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSED 160 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~ 160 (233)
........++.++..+ .++...++.. ++++++.++.++++++.+.+.|+++ ++.. ..|++|+|+|
T Consensus 259 -----~~~~~~~~~~~~~~~~-~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~~~g~~~~------ 323 (386)
T 1u08_A 259 -----RKVHQYLTFSVNTPAQ-LALADMLRAE-PEHYLALPDFYRQKRDILVNALNES-RLEI-LPCEGTYFLL------ 323 (386)
T ss_dssp -----HHHHHHHTSSCCHHHH-HHHHHHHHHC-THHHHTHHHHHHHHHHHHHHHTTSS-SCEE-CCCCBSSEEE------
T ss_pred -----HHHHHhhccCCChHHH-HHHHHHHhCC-cHHHHHHHHHHHHHHHHHHHHHHHC-CCee-cCCCceEEEE------
Confidence 2222222333333333 4444445433 5688999999999999999999887 5654 6788899999
Q ss_pred cccccccccccCCCCChHHHHHHHHhccCEEEECCcccC----CCCcEEEEeecCHHHHHHHHHHHHH
Q 047983 161 KCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVG----LKDWLRITFAVEPSAFEIGLGRMKA 224 (233)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~----~~~~~Rl~~~~~~~~l~~~~~~l~~ 224 (233)
++++.. ... ++.++..++++++||.+.||+.|+ ..+++|++++.+++++++++++|.+
T Consensus 324 ---~~~~~~--~~~-~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~iRis~~~~~~~i~~~~~~l~~ 385 (386)
T 1u08_A 324 ---VDYSAV--STL-DDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFAKKESTLLAAAERLRQ 385 (386)
T ss_dssp ---EECTTT--CCS-CHHHHHHHHHHHSCEECEEGGGGCSSCCCSCEEEEECCSCHHHHHHHHHHHTT
T ss_pred ---EecCCC--CCC-CHHHHHHHHHHhCCEEEeCchHhCCCCCCCCEEEEEEcCCHHHHHHHHHHHhh
Confidence 554321 001 355666667778899999999886 3579999999999999999999864
No 36
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=99.92 E-value=1.1e-24 Score=187.75 Aligned_cols=191 Identities=23% Similarity=0.320 Sum_probs=140.3
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCcccccccc-CCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVF-GSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
+|+++|++||++||+||+|.++.+++. +.++... +..++++++.|+||.++++|+|+||+++++ ++++. +
T Consensus 182 ~l~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--~~~~~---l--- 252 (376)
T 2dou_A 182 EALGLARKHGLWLIHDNPYVDQVYEGE-APSPLALPGAKERVVELFSLSKSYNLAGFRLGFALGSE--EALAR---L--- 252 (376)
T ss_dssp HHHHHHHHTTCEEEEECTTGGGBSSSC-CCCGGGSTTGGGTEEEEEEHHHHHTCGGGCCEEEEECH--HHHHH---H---
T ss_pred HHHHHHHHcCCEEEEEccchhcccCCC-CCChhhcCCCCCcEEEEecchhhcCChhheeEEEecCH--HHHHH---H---
Confidence 688999999999999999999988763 2233322 445789999999999999999999999876 34421 1
Q ss_pred hhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCCC
Q 047983 81 SISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSED 160 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~ 160 (233)
.......+.+.++..+ .++...++. .++++++.++.++++++.+.+.|+++ +. +..|.+|+|+|
T Consensus 253 -----~~~~~~~~~~~~~~~~-~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~--~~-~~~~~~~~~~~------ 316 (376)
T 2dou_A 253 -----ERVKGVIDFNQYAGVL-RMGVEALKT-PKEVVRGYARVYRERALGMAEALKGV--LS-LLPPRATMYLW------ 316 (376)
T ss_dssp -----HHHHHHHCCCSCHHHH-HHHHHHHTS-CHHHHHHHHHHHHHHHHHHHHHHTTT--SE-ECCCCBSSEEE------
T ss_pred -----HHHHHhcccCCCHHHH-HHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHh--cC-ccCCCeeEEEE------
Confidence 2222222223333333 444444443 36788999999999999999999886 44 35788999999
Q ss_pred cccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC--CCcEEEEeecCHHHHHHHHHHHHHHH
Q 047983 161 KCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL--KDWLRITFAVEPSAFEIGLGRMKAFY 226 (233)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~~Rl~~~~~~~~l~~~~~~l~~~l 226 (233)
++++. +. +..++..+++ ++||.+.||+.|+. .+++|++++.+++++++++++|.+++
T Consensus 317 ---~~~~~----~~-~~~~~~~~l~-~~gi~v~~g~~f~~~~~~~~Ris~~~~~~~i~~~l~~l~~~l 375 (376)
T 2dou_A 317 ---GRLPE----GV-DDLEFGLRLV-ERGVALAPGRGFGPGGKGFVRIALVRPLEELLEAAKRIREAL 375 (376)
T ss_dssp ---EECCT----TC-CHHHHHHHHH-HTTEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHTC
T ss_pred ---EECCC----CC-CHHHHHHHHH-HCCEEEcCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHh
Confidence 55542 12 3455555555 45999999999975 68999999988899999999998764
No 37
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=99.92 E-value=4.2e-25 Score=193.64 Aligned_cols=202 Identities=18% Similarity=0.320 Sum_probs=147.8
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccC-CccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFG-SIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|+++|++||++||+||+|.++.+++..+.++..+. ..++++++.|+||.++++|+|+||+++++ .+++. +
T Consensus 205 ~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~--~~~~~---l-- 277 (429)
T 1yiz_A 205 EVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTFSLTGWKIGWAYGPE--ALLKN---L-- 277 (429)
T ss_dssp HHHHHHHHHHTCEEEEECTTTTCBCTTSCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEESCH--HHHHH---H--
T ss_pred HHHHHHHHHcCcEEEEeccccccccCCCCCcChhhccCCcCceEEEecchhccCCCCcceEEEEeCH--HHHHH---H--
Confidence 3689999999999999999999998876555665553 45789999999999999999999999986 34421 1
Q ss_pred hhhhhHHhhhhhhhhccCcchHHHHHHHHhhh-----c-HHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEE
Q 047983 80 HSISLNMRMDDYLLLSESVYTTVGAVPQILEK-----T-EEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFV 153 (233)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~ 153 (233)
........++.++..+ .++...++. . .++++++.++.++++++.+.+.|+++ ++.. ..|.+|+|+
T Consensus 278 ------~~~~~~~~~~~~~~~~-~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~~~g~~~ 348 (429)
T 1yiz_A 278 ------QMVHQNCVYTCATPIQ-EAIAVGFETELKRLKSPECYFNSISGELMAKRDYMASFLAEV-GMNP-TVPQGGYFM 348 (429)
T ss_dssp ------HHHHHTTTCCCCHHHH-HHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHHH-TCEE-EECSBSSEE
T ss_pred ------HHHHhhcccCCChHHH-HHHHHHHhcccccccchHHHHHHHHHHHHHHHHHHHHHHHhC-CCcc-cCCCcceEE
Confidence 2222222334333333 444444443 2 25688999999999999999999886 5553 578889999
Q ss_pred EEecCCCcccccccccc-------cCCCCChHHHHHHHHhccCEEEECCcccCC-------CCcEEEEeecCHHHHHHHH
Q 047983 154 MYCGSEDKCLLKLNYSL-------LEGINSDTEFALKLAKEESIIVLPGITVGL-------KDWLRITFAVEPSAFEIGL 219 (233)
Q Consensus 154 ~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~-------~~~~Rl~~~~~~~~l~~~~ 219 (233)
| ++++... .....++.++..++++++||.+.||+.|+. .+++|++++.+++++++++
T Consensus 349 ~---------~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~~~e~i~~~l 419 (429)
T 1yiz_A 349 V---------ADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRYCFFKKDENLQKAA 419 (429)
T ss_dssp E---------EECCSSCTTTTCCSSSSSCHHHHHHHHHHHHTSEECBCGGGGSCGGGGGGTTTEEEEECCSCHHHHHHHH
T ss_pred E---------EEcccccccccccccccCCCHHHHHHHHHHhCCEEEeCchHhCCCcccCCCCCeEEEEecCCHHHHHHHH
Confidence 9 5543210 000012445666677789999999998863 5799999999999999999
Q ss_pred HHHHHHHH
Q 047983 220 GRMKAFYY 227 (233)
Q Consensus 220 ~~l~~~l~ 227 (233)
++|.++++
T Consensus 420 ~~l~~~l~ 427 (429)
T 1yiz_A 420 EILRKWKG 427 (429)
T ss_dssp HHHHHHSC
T ss_pred HHHHHhcc
Confidence 99988763
No 38
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=99.92 E-value=4.7e-25 Score=193.47 Aligned_cols=198 Identities=14% Similarity=0.113 Sum_probs=146.3
Q ss_pred hHHHHH-HHcCcEEEEccccCccccCCCcc--cccccc----CCccCEEEEccCccccCCCCceEEEEEecCCCcccccc
Q 047983 2 CIEETT-KKLGIMVIADEVYGHLVFGNTHF--VPMGVF----GSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDL 74 (233)
Q Consensus 2 ~i~~l~-~~~~~~lI~De~y~~~~~~~~~~--~~~~~~----~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~ 74 (233)
+|+++| ++||++||+||+|.++.|++... .++..+ +..+++|+++||||. ++||+|+||+++++ .+++.
T Consensus 205 ~l~~~a~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~~~G~r~G~~~~~~--~l~~~- 280 (427)
T 3ppl_A 205 RLSAMETAAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSKI-TLAGAGVSFFLTSA--ENRKW- 280 (427)
T ss_dssp HHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTSEEEEEESTTT-SCTTSSCEEEECCH--HHHHH-
T ss_pred HHHHHHhhcCCCEEEEECCCcccccCCCCCCccchhhhhhccCCCCcEEEEechhhc-cCcCccEEEEEcCH--HHHHH-
Confidence 788999 99999999999999988876442 234333 356889999999999 99999999999987 44421
Q ss_pred chhhhhhhhhHHhhhhhhhhccCcchHHHHHHHHhhh-c-HHHHHHHHHHHHHHHHHHHHHHhhc-CC---CcccccCCC
Q 047983 75 GVAFFHSISLNMRMDDYLLLSESVYTTVGAVPQILEK-T-EEEFFSKITDILREAADICCDRLKE-IP---CITCPKKPE 148 (233)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~-~~~~~~~~~~~~~~~~~~l~~~L~~-~~---~~~~~~~~~ 148 (233)
+ ........++.+...+ .+++.+++. . ..+++++.++.++++++.+.+.|++ ++ ++. +..|+
T Consensus 281 --~--------~~~~~~~~~~~~~~~q-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~-~~~p~ 348 (427)
T 3ppl_A 281 --Y--------TGHAGIRGIGPNKVNQ-LAHARYFGDAEGVRAVMRKHAASLAPKFNKVLEILDSRLAEYGVAQ-WTVPA 348 (427)
T ss_dssp --H--------HHHHHHHCSCCCHHHH-HHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCCE-ECCCS
T ss_pred --H--------HHHhhcccCCCCHHHH-HHHHHHHhChhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceE-EeCCC
Confidence 1 2233333344434444 455555554 2 4578999999999999999998866 43 344 36789
Q ss_pred ccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEEC-CcccC-----CCCcEEEEeec-CHHHHHHHHHH
Q 047983 149 GSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLP-GITVG-----LKDWLRITFAV-EPSAFEIGLGR 221 (233)
Q Consensus 149 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~p-g~~f~-----~~~~~Rl~~~~-~~~~l~~~~~~ 221 (233)
+|+|+| ++++.. +.+.+.+.|.++||.+.| |..|+ ..+++|++++. +++++++++++
T Consensus 349 ~g~~~~---------~~~~~~-------~~~~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~~Ris~~~~~~~~i~~~~~~ 412 (427)
T 3ppl_A 349 GGYFIS---------LDVVPG-------TASRVAELAKEAGIALTGAGSSYPLRQDPENKNLRLAPSLPPVEELEVAMDG 412 (427)
T ss_dssp BSSCEE---------EECSTT-------CHHHHHHHHHHTTEECCCTTTTSGGGCCTTSCEEEECCSSSCHHHHHHHHHH
T ss_pred ccEEEE---------EECCcc-------hHHHHHHHHHHCCCEEecCcCcCCCCCCCCCCeEEEECCCCCHHHHHHHHHH
Confidence 999999 555421 344455677788999999 66665 26899999998 89999999999
Q ss_pred HHHHHHHHhh
Q 047983 222 MKAFYYRHAK 231 (233)
Q Consensus 222 l~~~l~~~~~ 231 (233)
|.+++++...
T Consensus 413 l~~~l~~~~~ 422 (427)
T 3ppl_A 413 VATCVLLAAA 422 (427)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999987653
No 39
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=99.92 E-value=1.2e-24 Score=190.82 Aligned_cols=198 Identities=14% Similarity=0.105 Sum_probs=143.1
Q ss_pred hHHHHHH-HcCcEEEEccccCc--cccCCCccccccc----cCCccCEEEEccCccccCCCCceEEEEEecCCCcccccc
Q 047983 2 CIEETTK-KLGIMVIADEVYGH--LVFGNTHFVPMGV----FGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDL 74 (233)
Q Consensus 2 ~i~~l~~-~~~~~lI~De~y~~--~~~~~~~~~~~~~----~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~ 74 (233)
+|+++|+ +||++||+||+|.+ |.+++..+.++.. .+..+++|+++||||. ++||+|+||+++++ ++++.
T Consensus 203 ~l~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~~~GlriG~~~~~~--~l~~~- 278 (422)
T 3d6k_A 203 ELAEMSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSKI-THAGSGVSFFASSK--ENIEW- 278 (422)
T ss_dssp HHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTCEEEEEESTTT-SCTTSSCEEEECCH--HHHHH-
T ss_pred HHHHHHhhccCCEEEEECCccccccCCCCCCCcChhhHhhccCCCCcEEEEcChhhh-cCcccceEEEEeCH--HHHHH-
Confidence 6888998 99999999999986 4433323334422 3456889999999999 99999999999986 44421
Q ss_pred chhhhhhhhhHHhhhhhhhhccCcchHHHHHHHHhhh-c-HHHHHHHHHHHHHHHHHHHHHHhhc-CC---CcccccCCC
Q 047983 75 GVAFFHSISLNMRMDDYLLLSESVYTTVGAVPQILEK-T-EEEFFSKITDILREAADICCDRLKE-IP---CITCPKKPE 148 (233)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~-~~~~~~~~~~~~~~~~~~l~~~L~~-~~---~~~~~~~~~ 148 (233)
+ .......+.+.+...+ .+...+++. . ..+++++.++.++++++.+.+.|++ ++ ++. +..|+
T Consensus 279 --l--------~~~~~~~~~~~~~~~q-~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~-~~~p~ 346 (422)
T 3d6k_A 279 --Y--------ASHANVRGIGPNKLNQ-LAHAQFFGDVAGLKAHMLKHAASLAPKFERVLEILDSRLSEYGVAK-WTSPT 346 (422)
T ss_dssp --H--------HHHHHHHCSCCCHHHH-HHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEE-ECCCS
T ss_pred --H--------HHHHHhhcCCCCHHHH-HHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCceE-EeCCC
Confidence 1 2222323333333333 444555544 2 3578999999999999999998865 32 344 35788
Q ss_pred ccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEEC-CcccC-----CCCcEEEEee-cCHHHHHHHHHH
Q 047983 149 GSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLP-GITVG-----LKDWLRITFA-VEPSAFEIGLGR 221 (233)
Q Consensus 149 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~p-g~~f~-----~~~~~Rl~~~-~~~~~l~~~~~~ 221 (233)
+|+|+| ++++.. +.+.+.++|+++||.+.| |..|+ ..+++|+|++ .+++++++++++
T Consensus 347 ~g~~~~---------~~~~~~-------~~~~~~~~l~~~gV~v~~~g~~f~~~~~~~~~~iRis~~~~~~e~i~~~~~~ 410 (422)
T 3d6k_A 347 GGYFIS---------VDVVPG-------TASRVVELAKEAGIALTGAGSSFPLHNDPNNENIRLAPSLPPVAELEVAMDG 410 (422)
T ss_dssp BSSCEE---------EEESTT-------CHHHHHHHHHHTTEECCCTTTTSGGGCCTTSCEEEECCSSSCHHHHHHHHHH
T ss_pred cceEEE---------EECCCC-------CHHHHHHHHHHCCeEEEcCccccCCCCCCCCCeEEEecCCCCHHHHHHHHHH
Confidence 999999 555421 345567788899999999 55564 2589999999 499999999999
Q ss_pred HHHHHHHHhh
Q 047983 222 MKAFYYRHAK 231 (233)
Q Consensus 222 l~~~l~~~~~ 231 (233)
|.+++++..+
T Consensus 411 l~~~l~~~~~ 420 (422)
T 3d6k_A 411 FATCVLMAAL 420 (422)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999987654
No 40
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=99.92 E-value=3.1e-24 Score=188.18 Aligned_cols=201 Identities=20% Similarity=0.313 Sum_probs=144.1
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCC--------ccCEEEEccCccccCCCCceEEEEEecCCCccccc
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGS--------IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQD 73 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~--------~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~ 73 (233)
+|+++|++||++||+||+|.++.+++..+.++..+.. .++++++.|+||.|+++|+|+||++++++ .++
T Consensus 212 ~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~viv~~s~sK~~g~~Glr~G~~~~~~~-~~~-- 288 (428)
T 1iay_A 212 SVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLPGFRVGIIYSFND-DVV-- 288 (428)
T ss_dssp HHHHHHHTTTCEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTSSCGGGCEEEEEESCH-HHH--
T ss_pred HHHHHHHHCCeEEEEeccccccccCCCCccCHHHhccccccccCCCCcEEEEecchhhcCCCCceEEEEEeCCH-HHH--
Confidence 6899999999999999999998887654445544432 47899999999999999999999999642 233
Q ss_pred cchhhhhhhhhHHhhhhhhh-hccCcchHHHHHHHHhhhc--HHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCcc
Q 047983 74 LGVAFFHSISLNMRMDDYLL-LSESVYTTVGAVPQILEKT--EEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGS 150 (233)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g 150 (233)
..+..... ++.+...+ .++..+++.. .++++++.++.++++++.+.+.|+++ ++.. .++++|
T Consensus 289 ------------~~~~~~~~~~~~~~~~~-~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~~~g 353 (428)
T 1iay_A 289 ------------NCARKMSSFGLVSTQTQ-YFLAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVV-GIKC-LKNNAG 353 (428)
T ss_dssp ------------HHHHHHHTTSCCCHHHH-HHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCB-CCCSSS
T ss_pred ------------HHHHHHHhcccCCHHHH-HHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcc-cCCCee
Confidence 33322222 23333333 4555555443 24578899999999999999999887 5553 567789
Q ss_pred EEEEEecCCCccccccccccc-CCCCChHHHHHHHHhccCEEEECCcccCC--CCcEEEEee-cCHHHHHHHHHHHHHHH
Q 047983 151 MFVMYCGSEDKCLLKLNYSLL-EGINSDTEFALKLAKEESIIVLPGITVGL--KDWLRITFA-VEPSAFEIGLGRMKAFY 226 (233)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~~Rl~~~-~~~~~l~~~~~~l~~~l 226 (233)
+|+| ++++.... ....+..++..++++++||.+.||+.|+. .+++|++++ .+++++++++++|.+++
T Consensus 354 ~~~~---------~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~~~~~~~~~~~~iRis~~~~~~e~i~~~~~~l~~~l 424 (428)
T 1iay_A 354 LFCW---------MDLRPLLRESTFDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFANMDDGTVDIALARIRRFV 424 (428)
T ss_dssp SEEE---------EECGGGCSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSSSEEEEECSSSCHHHHHHHHHHHHHHH
T ss_pred EEEE---------EechhhcCCCchhHHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEecCCHHHHHHHHHHHHHHH
Confidence 9999 55432100 00001234455555556999999999875 579999999 58999999999999988
Q ss_pred HHH
Q 047983 227 YRH 229 (233)
Q Consensus 227 ~~~ 229 (233)
++.
T Consensus 425 ~~~ 427 (428)
T 1iay_A 425 GVE 427 (428)
T ss_dssp HTT
T ss_pred hcc
Confidence 653
No 41
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=99.92 E-value=4.1e-24 Score=185.34 Aligned_cols=193 Identities=20% Similarity=0.306 Sum_probs=139.6
Q ss_pred hHHHHHHH------cCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccc
Q 047983 2 CIEETTKK------LGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLG 75 (233)
Q Consensus 2 ~i~~l~~~------~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~ 75 (233)
+|+++|++ ||++||+||+|.++.+++...... ....+++++++|+||.|+++|+|+||+++++ .+++...
T Consensus 196 ~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~--~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--~~~~~~~ 271 (398)
T 3ele_A 196 KLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFV--TKYYDNTLVCYSYSKSLSLPGERIGYVLVPD--EVYDKAE 271 (398)
T ss_dssp HHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCCCG--GGTCSSEEEEEESTTTSSCTTTCCEEEECCT--TSTTHHH
T ss_pred HHHHHHHhhhhccCCCeEEEEeccccccccCCCCcCCh--HhhcCCeEEEEehhhcCCCccceeEEEEEcc--hhhhHHH
Confidence 57899999 999999999999999876433222 2335789999999999999999999999988 3332111
Q ss_pred hhhhhhhhhHHhhhhhhhh--ccCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEE
Q 047983 76 VAFFHSISLNMRMDDYLLL--SESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMF 152 (233)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~ 152 (233)
+. ..+...... ..+++... .++..+++... .++.++++++.+.+.|+++ ++.. ..|++++|
T Consensus 272 ~~--------~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~------~~~~~~~~~~~l~~~L~~~-g~~~-~~~~~~~~ 335 (398)
T 3ele_A 272 LY--------AAVCGAGRALGYVCAPSLFQKMIVKCQGATG------DINAYKENRDLLYEGLTRI-GYHC-FKPDGAFY 335 (398)
T ss_dssp HH--------HHHHHHHHHTTCCCSCHHHHHHHTTCTTCCC------CHHHHHHHHHHHHHHHHHH-TCCE-ECCSBSSE
T ss_pred HH--------HHHHHHhhhccccCCCHHHHHHHHHHhcCHH------HHHHHHHHHHHHHHHHHHc-CCee-cCCCeeEE
Confidence 12 222221111 22333333 44444443322 4677888999999999886 5553 67899999
Q ss_pred EEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeecCHHHHHHHHHHHHHHHHHHh
Q 047983 153 VMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAVEPSAFEIGLGRMKAFYYRHA 230 (233)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~~~~~l~~~~~~l~~~l~~~~ 230 (233)
+| ++++. . +..++ .+.|+++||.+.||+.|+..+++|++++.+++++++++++|.+++++++
T Consensus 336 ~~---------~~~~~-----~-~~~~~-~~~l~~~gi~v~~g~~~~~~~~iRis~~~~~e~i~~~l~~l~~~l~~~~ 397 (398)
T 3ele_A 336 MF---------VKALE-----D-DSNAF-CEKAKEEDVLIVAADGFGCPGWVRISYCVDREMIKHSMPAFEKIYKKYN 397 (398)
T ss_dssp EE---------EECSS-----S-CHHHH-HHHHHTTTEECEESGGGTCTTEEEEECCSCHHHHHHHHHHHHHHHHHHC
T ss_pred EE---------EEcCC-----C-CHHHH-HHHHHHCCEEEeCccccCCCCeEEEEecCCHHHHHHHHHHHHHHHHHhh
Confidence 99 55431 1 24444 4567788999999999998899999999899999999999999998764
No 42
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=99.92 E-value=1.2e-24 Score=187.22 Aligned_cols=188 Identities=20% Similarity=0.266 Sum_probs=140.0
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCcccccccc-C-----CccCEEEEccCccccCCCCceEEEEEecCCCccccccc
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVF-G-----SIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLG 75 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~-~-----~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~ 75 (233)
+|+++|++||++||+||+|.++.+++. +.++... + ..++++++.|+||.+|++|+|+||+++++ ++++.
T Consensus 178 ~i~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~--~~~~~-- 252 (376)
T 3ezs_A 178 SWVKLALKHDFILINDECYSEIYENTP-PPSLLEACMLAGNEAFKNVLVIHSLSKRSSAPGLRSGFIAGDS--RLLEK-- 252 (376)
T ss_dssp HHHHHHHHHTCEEEEECTTTTCBSSSC-CCCHHHHHHHTTCTTCTTEEEEEESTTTTTCGGGCCEEEEECH--HHHHH--
T ss_pred HHHHHHHHcCcEEEEEccchhhccCCC-CCCHHHccccccccccCcEEEEecchhccCCccceeEEEeeCH--HHHHH--
Confidence 688899999999999999999998873 3333222 1 46889999999999999999999999876 34321
Q ss_pred hhhhhhhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEE
Q 047983 76 VAFFHSISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMY 155 (233)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~ 155 (233)
+ .........+.++..+ .+....++. .+++++.++.++++++.+.+.|+ ++ ..|.+|+|+|
T Consensus 253 -~--------~~~~~~~~~~~~~~~~-~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~---~~---~~~~~~~~~~- 313 (376)
T 3ezs_A 253 -Y--------KAFRAYLGYTSANAIQ-KASEAAWLD--DRHAEFFRNIYANNLKLARKIFK---NT---LIYPYSFYVY- 313 (376)
T ss_dssp -H--------HHHHTTTCCCCCHHHH-HHHHHHHHC--SHHHHHHHHHHHHHHHHHHHHST---TC---CCCSBSSEEE-
T ss_pred -H--------HHHHhhhcCCCChHHH-HHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHhc---CC---CCCCcceEEE-
Confidence 1 2222222233333333 444444432 45689999999999999999997 33 3688999999
Q ss_pred ecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccC----CCCcEEEEeecCHHHHHHHHHHHHHHHHHH
Q 047983 156 CGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVG----LKDWLRITFAVEPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~----~~~~~Rl~~~~~~~~l~~~~~~l~~~l~~~ 229 (233)
++++ +..++..++++++||.+.||+.|+ ..+++|++++.+++++++++++|.++++++
T Consensus 314 --------~~~~--------~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~~~~~i~~~l~~l~~~l~~~ 375 (376)
T 3ezs_A 314 --------LPVQ--------NGENFAKTLYQNEGIITLPALYLGRNRIGADYVRLALVYDTPLLEKPLEIIETYRENH 375 (376)
T ss_dssp --------EECS--------CHHHHHHHHHHHHCCBCEEGGGGCSTTTTTTEEEEECCSCHHHHHHHHHHHHHHHCC-
T ss_pred --------EECC--------CHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Confidence 5554 266777777766899999999998 368999999889999999999999988643
No 43
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.92 E-value=6.5e-24 Score=183.76 Aligned_cols=195 Identities=17% Similarity=0.257 Sum_probs=143.9
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCc--cCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSI--VPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~--~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
+|+++|++||++||+||+|.++.+++..+.++..++.. ++ +.|+||.++++|+|+||++++++ .++
T Consensus 186 ~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~---~~s~sK~~~~~G~r~G~~~~~~~-~~~-------- 253 (390)
T 1d2f_A 186 IMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWAL---LTSGSKSFNIPALTGAYGIIENS-SSR-------- 253 (390)
T ss_dssp HHHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGGTCCSSEEE---EECSHHHHTCGGGCCEEEEECSH-HHH--------
T ss_pred HHHHHHHHcCCEEEEEccccccccCCCCCcCHHHcchhhHhh---ccCccHhhcccChhheEEEECCH-HHH--------
Confidence 68999999999999999999999887655566555432 32 99999999999999999999742 233
Q ss_pred hhhhhHHhhhhhhh--hcc-CcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhc-CCCcccccCCCccEEEE
Q 047983 80 HSISLNMRMDDYLL--LSE-SVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKE-IPCITCPKKPEGSMFVM 154 (233)
Q Consensus 80 ~~~~~~~~~~~~~~--~~~-~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~g~~~~ 154 (233)
..+..... ... ++++.. .+..+.++. ..+++++.++.++++++.+.+.|++ ++++.. ..|.|++++|
T Consensus 254 ------~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~ 325 (390)
T 1d2f_A 254 ------DAYLSALKGRDGLSSPSVLALTAHIAAYQQ-GAPWLDALRIYLKDNLTYIADKMNAAFPELNW-QIPQSTYLAW 325 (390)
T ss_dssp ------HHHHHHHHTTSCCCSCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCC-CCCSBCSEEE
T ss_pred ------HHHHHHHhhhcccCCCCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHHHhhCCCCEE-ecCCccEEEE
Confidence 22222211 111 223332 333333332 3568899999999999999999988 777764 6788999999
Q ss_pred EecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC--CCcEEEEeecCHHHHHHHHHHHHHHHHHH
Q 047983 155 YCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL--KDWLRITFAVEPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~~Rl~~~~~~~~l~~~~~~l~~~l~~~ 229 (233)
++++.. +. +..++...+++++||.+.||+.|+. .+++|++++.+++++++++++|.++++++
T Consensus 326 ---------~~~~~~---~~-~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~~l~~~ 389 (390)
T 1d2f_A 326 ---------LDLRPL---NI-DDNALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAGCPRSKLEKGVAGLINAIRAV 389 (390)
T ss_dssp ---------EECGGG---CC-CHHHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHHHHH
T ss_pred ---------EEcccc---CC-CHHHHHHHHHHHcCEEeeCccccCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHhh
Confidence 555421 12 3455555555578999999999973 68999999998899999999999998765
No 44
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=99.92 E-value=4.4e-24 Score=185.98 Aligned_cols=200 Identities=22% Similarity=0.385 Sum_probs=146.1
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccC-EEEEccCccccCCCCceEEEEE--ecCCC--ccccccch
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVP-VLTLGSISKRWIVPGWRLGWLV--TSDPN--GILQDLGV 76 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~-~i~~~s~sK~~~~~G~R~G~~~--~~~~~--~~~~~~~~ 76 (233)
+|+++|++||++||+||+|+++.+++ .+.++..++ .++ ++++.|+||.++++|+|+||++ +++.. ++++.
T Consensus 198 ~i~~~a~~~~~~li~De~~~~~~~~~-~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~l~~~--- 272 (406)
T 1xi9_A 198 EILNIAGEYEIPVISDEIYDLMTYEG-EHISPGSLT-KDVPVIVMNGLSKVYFATGWRLGYMYFVDPENKLSEVREA--- 272 (406)
T ss_dssp HHHHHHHHHTCCEEEECTTTTCBSSS-CCCCHHHHC-SSSCEEEEEESTTTTCCGGGCCEEEEEECTTCTTHHHHHH---
T ss_pred HHHHHHHHcCCEEEEEcCccccccCC-CCCCHHHcC-CCceEEEEeccccccCCCccEEEEEEEecCchhHHHHHHH---
Confidence 68999999999999999999998843 334555554 577 8999999999999999999999 65410 23321
Q ss_pred hhhhhhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEe
Q 047983 77 AFFHSISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYC 156 (233)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~ 156 (233)
+ ....... .+.++..+ .++.+.++.. .++++++++.++++++.+.+.|++++++.. ..|.+|+|+|
T Consensus 273 l--------~~~~~~~-~~~~~~~~-~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~~-- 338 (406)
T 1xi9_A 273 I--------DRLARIR-LCPNTPAQ-FAAIAGLTGP-MDYLKEYMKKLKERRDYIYKRLNEIPGIST-TKPQGAFYIF-- 338 (406)
T ss_dssp H--------HHHHHHT-CCSCSHHH-HHHHHHHHSC-CHHHHHHHHHHHHHHHHHHHHHHTSTTEEC-CCCCBSSEEC--
T ss_pred H--------HHHHHhh-cCCCHHHH-HHHHHHHhCC-cHHHHHHHHHHHHHHHHHHHHHHhCCCCee-ecCCeeEEEE--
Confidence 1 2222222 33333333 4444445323 345888999999999999999998877764 6788999999
Q ss_pred cCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC--CCcEEEEeecCHHHHHHHHHHHHHHHHHHh
Q 047983 157 GSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL--KDWLRITFAVEPSAFEIGLGRMKAFYYRHA 230 (233)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~~Rl~~~~~~~~l~~~~~~l~~~l~~~~ 230 (233)
+.++.. . +. +..++..++++++||.+.||+.|+. .+++|++++.+++++++++++|.++++++.
T Consensus 339 -------~~~~~~-~-~~-~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~lRis~~~~~~~i~~~~~~l~~~l~~~~ 404 (406)
T 1xi9_A 339 -------PKIEVG-P-WK-NDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFLPPIEILEEAMDRFEKFMKERL 404 (406)
T ss_dssp -------CEECSC-S-CS-SHHHHHHHHHHHHCEECEEGGGGCGGGTTBEEEECCSCHHHHHHHHHHHHHHHHHC-
T ss_pred -------EecCcc-C-CC-CHHHHHHHHHHhCCEEEeCchhcCCCCCCEEEEEecCCHHHHHHHHHHHHHHHHHHh
Confidence 555320 0 11 3556666666688999999999975 789999999889999999999999987753
No 45
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.92 E-value=4.3e-24 Score=185.18 Aligned_cols=190 Identities=22% Similarity=0.420 Sum_probs=142.5
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCC-ccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGS-IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|+++|++||+++|+||+|+++.+++ .+.++..++. .++++++.|+||.++++|+|+||+++++ ++++. +
T Consensus 197 ~~l~~~~~~~~~~li~Dea~~~~~~~g-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~l~~~~--~~~~~---l-- 268 (389)
T 1o4s_A 197 EGLVRLAKKRNFYIISDEVYDSLVYTD-EFTSILDVSEGFDRIVYINGFSKSHSMTGWRVGYLISSE--KVATA---V-- 268 (389)
T ss_dssp HHHHHHHHHHTCEEEEECTTTTSBCSS-CCCCHHHHCSSSTTEEEEEESTTTTTCGGGCCEEEECCH--HHHHH---H--
T ss_pred HHHHHHHHHcCCEEEEEccccccccCC-CCCCHhhcCCCCCcEEEEeechhhcCCcccceEEEEeCH--HHHHH---H--
Confidence 368999999999999999999998876 3344554543 5789999999999999999999999976 34321 1
Q ss_pred hhhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCC
Q 047983 80 HSISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSE 159 (233)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~ 159 (233)
.........+.++..+ .+....++.. +++.++.++++++.+.+.|+++ ++.. ..|++++|+|
T Consensus 269 ------~~~~~~~~~~~~~~~~-~a~~~~l~~~----~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~~~~~~~~----- 330 (389)
T 1o4s_A 269 ------SKIQSHTTSCINTVAQ-YAALKALEVD----NSYMVQTFKERKNFVVERLKKM-GVKF-VEPEGAFYLF----- 330 (389)
T ss_dssp ------HHHHHHHTCSCCHHHH-HHHHHHTTCC----CHHHHHHHHHHHHHHHHHHHHT-TCCC-CCCSBSSEEE-----
T ss_pred ------HHHhhhcccCCCHHHH-HHHHHHHhcc----HHHHHHHHHHHHHHHHHHHHhc-CCee-ecCCcceEEE-----
Confidence 2222222233333333 3334444433 6788899999999999999887 6654 5788999999
Q ss_pred CcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeecCHHHHHHHHHHHHHHHH
Q 047983 160 DKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAVEPSAFEIGLGRMKAFYY 227 (233)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~~~~~l~~~~~~l~~~l~ 227 (233)
++++ . +..++..++++++||.+.||+.|+..+++|++++.+++++++++++|.++++
T Consensus 331 ----~~~~--~-----~~~~l~~~l~~~~gi~v~~g~~f~~~~~~Ris~~~~~~~l~~~l~~l~~~l~ 387 (389)
T 1o4s_A 331 ----FKVR--G-----DDVKFCERLLEEKKVALVPGSAFLKPGFVRLSFATSIERLTEALDRIEDFLN 387 (389)
T ss_dssp ----EECS--S-----CHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCSCHHHHHHHHHHHHHHHT
T ss_pred ----EeCC--C-----CHHHHHHHHHHHCCEEEeCchhcCCCCeEEEEEeCCHHHHHHHHHHHHHHHh
Confidence 5554 1 3556666666688999999999987789999999999999999999998874
No 46
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=99.92 E-value=2.4e-24 Score=195.14 Aligned_cols=208 Identities=16% Similarity=0.225 Sum_probs=144.2
Q ss_pred hHHHHH--HHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 2 CIEETT--KKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 2 ~i~~l~--~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
+|+++| +++|++||+||+|+++.++ +.++.... .+++|++.||||.||+||+|+||+++++. .+++. +.+.
T Consensus 269 ~l~~~a~~~~~~~~ii~De~y~~~~~~---~~s~~~~~-~~~~i~~~S~SK~~g~~GlRiG~~~~~~~-~l~~~--l~~~ 341 (546)
T 2zy4_A 269 RVRNIVAEHRPDLMILTDDVYGTFADD---FQSLFAIC-PENTLLVYSFSKYFGATGWRLGVVAAHQQ-NVFDL--ALDK 341 (546)
T ss_dssp HHHHHHHHTCTTCEEEEECTTGGGSTT---CCCHHHHC-GGGEEEEEESTTTTTCGGGCEEEEEEESS-CHHHH--HHHT
T ss_pred HHHHHHHhccCCcEEEEeCcchhhccc---CcCHHHhC-CCCEEEEEeCccccCCCCcceEEEEECCH-HHHHH--HHhh
Confidence 588999 7899999999999998753 23343333 36899999999999999999999999873 24432 1100
Q ss_pred hh----hhhHHhhh-----------------------hhhhhccCcchHH-H---HHHHHhhhcHHHHHHHHHHHHHHHH
Q 047983 80 HS----ISLNMRMD-----------------------DYLLLSESVYTTV-G---AVPQILEKTEEEFFSKITDILREAA 128 (233)
Q Consensus 80 ~~----~~~~~~~~-----------------------~~~~~~~~~~~~~-~---~~~~~l~~~~~~~~~~~~~~~~~~~ 128 (233)
.. ..+...++ .+.+.+.+.+.|. . ++++++. ..+.+.+++++.+++|+
T Consensus 342 ~p~~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~a~~a~~all~-~~~~~~~~~r~~~~~r~ 420 (546)
T 2zy4_A 342 LQESEKVALDHRYRSLLPDVRSLKFIDRLVADSRAVALNHTAGLSTPQQVQMALFSLFALMD-EADEYKHTLKQLIRRRE 420 (546)
T ss_dssp SCHHHHHHHHHHHTTTCSCGGGCCHHHHHHHHTTTTTTGGGCSSCHHHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHH
T ss_pred cchhhhHHHHHHhhhccccccchhhhhhhhhhhHHHHhhccCCCCcHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHH
Confidence 00 00000000 1112233334443 2 1345543 23578899999999999
Q ss_pred HHHHHHhhcCCCcccccCCCccEEEEEecCCCcccccccc-c---cc--------CCCCChHHHHHHHHhccCEEEECCc
Q 047983 129 DICCDRLKEIPCITCPKKPEGSMFVMYCGSEDKCLLKLNY-S---LL--------EGINSDTEFALKLAKEESIIVLPGI 196 (233)
Q Consensus 129 ~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~---~~--------~~~~~~~~~~~~ll~~~gi~v~pg~ 196 (233)
+.+.+.|. + .+.. .+|++|||+| ++++. . .. .+. ++.+++.++++++||.+.||+
T Consensus 421 ~~l~~~L~-~-~~~~-~~~~~~~~l~---------~~l~~~~~~~~~~~~~~wl~~~~-~~~~~l~~ll~~~gV~v~pG~ 487 (546)
T 2zy4_A 421 TTLYRELG-M-PPLR-DENAVDYYTL---------IDLQDVTAKLYGEAFSEWAVKQS-STGDMLFRIADETGIVLLPGR 487 (546)
T ss_dssp HHHHGGGT-S-SCCC-CTTBCCSEEE---------EEHHHHHHHHHCHHHHHHHHHHC-CHHHHHHHHHHHHSCCCEESS
T ss_pred HHHHHhcC-C-Cccc-CCCCeeEEEE---------EEHHHhhcccccHHHHHHhhccC-CHHHHHHHHHHHCCEEEeCcc
Confidence 99999996 4 3332 5789999999 55431 0 00 011 356778889999999999999
Q ss_pred ccCC-CCcEEEEeec-CHHHHHHHHHHHHHHHHHHh
Q 047983 197 TVGL-KDWLRITFAV-EPSAFEIGLGRMKAFYYRHA 230 (233)
Q Consensus 197 ~f~~-~~~~Rl~~~~-~~~~l~~~~~~l~~~l~~~~ 230 (233)
.|+. ++++|++++. +++++++++++|+++++++.
T Consensus 488 ~F~~~~~~iRis~~~~~~e~i~~~~~~l~~~l~~~~ 523 (546)
T 2zy4_A 488 GFGSNRPSGRASLANLNEYEYAAIGRALRKMADELY 523 (546)
T ss_dssp CTTCSSCEEEEESSSSCHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHHH
Confidence 9986 5789999997 89999999999999998875
No 47
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=99.91 E-value=1.1e-23 Score=183.64 Aligned_cols=198 Identities=17% Similarity=0.238 Sum_probs=139.7
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHS 81 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~ 81 (233)
+|+++|++||++||+||+|..+..+ ....... .+..++++++.|+|| ++++|+|+||+++++ ++++. +
T Consensus 204 ~l~~~a~~~~~~li~De~~~~~~~~-~~~~~~~-~~~~~~~i~~~s~sK-~~~~G~r~G~~~~~~--~~~~~---~---- 271 (417)
T 3g7q_A 204 KLDRLANQHNIPLVIDNAYGVPFPG-IIFSEAR-PLWNPNIILCMSLSK-LGLPGSRCGIIIAND--KTITA---I---- 271 (417)
T ss_dssp HHHHHHHHTTCCEEEECTTCTTTTC-CBCSCCC-CCCCTTEEEEEESGG-GTCTTSCCEEEECCH--HHHHH---H----
T ss_pred HHHHHHHHcCCEEEEeCCCcccccc-ccccccc-cCCCCCEEEEEechh-ccCCCcceEEEEeCH--HHHHH---H----
Confidence 6899999999999999999874321 1111111 133578999999999 599999999999976 34421 1
Q ss_pred hhhHHhhhhhhhhccCcchHHHHHHHHhhhc-HHHHHHH-HHHHHHHHHHHHHHHhhc-CCC--cccccCCCccEEEEEe
Q 047983 82 ISLNMRMDDYLLLSESVYTTVGAVPQILEKT-EEEFFSK-ITDILREAADICCDRLKE-IPC--ITCPKKPEGSMFVMYC 156 (233)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~-~~~~~~~~~~~l~~~L~~-~~~--~~~~~~~~~g~~~~~~ 156 (233)
.........+.++..+ .++..+++.. ..++..+ +++.++++++.+.+.|++ +++ +. +..|++|+|+|
T Consensus 272 ----~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~g~~~~-- 343 (417)
T 3g7q_A 272 ----ANMNGIISLAPGGMGP-AMMCEMIKRNDLLRLSETVIKPFYYQRVQQTIAIIRRYLSEERCL-IHKPEGAIFLW-- 343 (417)
T ss_dssp ----HHHHHHHCCCCCSHHH-HHHHHHHHTTCHHHHHHHTHHHHHHHHHHHHHHHHHHHCCTTTCE-EECCCBSSEEE--
T ss_pred ----HHhhcceeeCCCcHHH-HHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCce-eeCCCcceEEE--
Confidence 2223333333333444 4444444443 4455555 788999999999999977 664 44 35789999999
Q ss_pred cCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC---------CCcEEEEeecCHHHHHHHHHHHHHHHH
Q 047983 157 GSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL---------KDWLRITFAVEPSAFEIGLGRMKAFYY 227 (233)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~---------~~~~Rl~~~~~~~~l~~~~~~l~~~l~ 227 (233)
+.++.. +. +..++ .+.|.++||.+.||+.|+. .+++|++++.+++++++++++|.++++
T Consensus 344 -------~~~~~~---~~-~~~~l-~~~l~~~gi~v~~g~~f~~~~~~~~~~~~~~iRis~~~~~~~i~~~~~~l~~~l~ 411 (417)
T 3g7q_A 344 -------LWFKDL---PI-TTELL-YQRLKARGVLMVPGHYFFPGLDKPWPHTHQCMRMNYVPEPDKIEAGVKILAEEIE 411 (417)
T ss_dssp -------EECTTC---SS-CHHHH-HHHHHHTTEECEEGGGGCTTBSSCCGGGGGEEEEESCSCHHHHHHHHHHHHHHHH
T ss_pred -------EEcCCC---CC-CHHHH-HHHHHHCCEEEECchhhCCCCccccccCCCeEEEEecCCHHHHHHHHHHHHHHHH
Confidence 555421 11 24444 4455788999999999964 469999999999999999999999998
Q ss_pred HHhh
Q 047983 228 RHAK 231 (233)
Q Consensus 228 ~~~~ 231 (233)
+..+
T Consensus 412 ~~~~ 415 (417)
T 3g7q_A 412 RAWR 415 (417)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8754
No 48
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=99.91 E-value=2.8e-24 Score=185.52 Aligned_cols=193 Identities=23% Similarity=0.426 Sum_probs=142.4
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHS 81 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~ 81 (233)
+|+++|++||+++|+||+|+++.+ +..+.++..+ ..++++++.|+||.|+++|+|+||+++++ ++++. +
T Consensus 176 ~i~~~~~~~~~~li~De~~~~~~~-g~~~~~~~~~-~~~~~~~~~s~sK~~~~~G~r~G~~~~~~--~~~~~---~---- 244 (381)
T 1v2d_A 176 AIARLARAHDLFLISDEVYDELYY-GERPRRLREF-APERTFTVGSAGKRLEATGYRVGWIVGPK--EFMPR---L---- 244 (381)
T ss_dssp HHHHHHHHTTCEEEEECTTTTCBS-SSCCCCHHHH-CTTTEEEEEEHHHHTTCGGGCCEEEECCT--TTHHH---H----
T ss_pred HHHHHHHHcCCEEEEEcCcccccc-CCCCCCHHHh-cCCCEEEEeechhhcCCcccceEEEEeCH--HHHHH---H----
Confidence 689999999999999999999988 4433445444 45789999999999999999999999977 44431 1
Q ss_pred hhhHHhhhhhhhhccCcchHHHHHHHHhhhc-HHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCCC
Q 047983 82 ISLNMRMDDYLLLSESVYTTVGAVPQILEKT-EEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSED 160 (233)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~ 160 (233)
........++.++..+ .++...++.. ..+++++.++.++++++++.+.|++. ++.. ..|.+|+|+|
T Consensus 245 ----~~~~~~~~~~~~~~~~-~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~~~~~~~~------ 311 (381)
T 1v2d_A 245 ----AGMRQWTSFSAPTPLQ-AGVAEALKLARREGFYEALREGYRRRRDLLAGGLRAM-GLRV-YVPEGTYFLM------ 311 (381)
T ss_dssp ----HHHHHHHTSSCCHHHH-HHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHT-TCCE-ECCSBSSEEE------
T ss_pred ----HHHHhhcccCCCcHHH-HHHHHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHC-CCEe-cCCCcceEEE------
Confidence 2222223334333333 3444444322 25678899999999999999999886 5554 5778899999
Q ss_pred cccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC----CCcEEEEeecCHHHHHHHHHHHHHHHHHHhh
Q 047983 161 KCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL----KDWLRITFAVEPSAFEIGLGRMKAFYYRHAK 231 (233)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~----~~~~Rl~~~~~~~~l~~~~~~l~~~l~~~~~ 231 (233)
++++ . . + +.++++++||.+.||+.|+. .+++|++++.+++++++++++|.+++++.++
T Consensus 312 ---~~~~--~---~--~---~~~~l~~~gi~v~~g~~~~~~~~~~~~iRi~~~~~~~~i~~~~~~l~~~l~~~r~ 373 (381)
T 1v2d_A 312 ---AELP--G---W--D---AFRLVEEARVALIPASAFYLEDPPKDLFRFAFCKTEEELHLALERLGRVVNSPRE 373 (381)
T ss_dssp ---EECT--T---C--C---HHHHHHHTCEECEEGGGGCSSSCCTTEEEEECCSCHHHHHHHHHHHHHHC-----
T ss_pred ---EecC--h---H--h---HHHHHHhCCEEEecchHhCCCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhhccc
Confidence 5443 2 1 2 67778899999999999974 6799999999999999999999999877653
No 49
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=99.91 E-value=3.5e-24 Score=193.57 Aligned_cols=211 Identities=17% Similarity=0.260 Sum_probs=148.0
Q ss_pred hHHHHHH-HcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhh-h
Q 047983 2 CIEETTK-KLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAF-F 79 (233)
Q Consensus 2 ~i~~l~~-~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~-~ 79 (233)
+|+++|+ +||++||+||+|.++.++. .++.... .+++++++||||.||++|+|+||+++++. .++++ ++. +
T Consensus 268 ~l~~la~~~~~~~li~De~y~~~~~~~---~~~~~~~-~~~~i~~~S~SK~~g~~G~RiG~l~~~~~-~~~~~--li~~l 340 (533)
T 3f6t_A 268 AIKQAVEKNPKLMIISDEVYGAFVPNF---KSIYSVV-PYNTMLVYSYSKLFGCTGWRLGVIALNEK-NVFDD--NIAHL 340 (533)
T ss_dssp HHHHHHHHCTTCEEEEECTTGGGSTTC---CCHHHHS-GGGEEEEEESHHHHTCGGGCEEEEEEESS-CHHHH--HHHTS
T ss_pred HHHHHHHhCCCCEEEEcCCccccccCc---cCHhhcC-CCCEEEEecCcccCCCcccceEEEEECcH-HHHHH--HHHhc
Confidence 6889999 6899999999999988653 2333333 37899999999999999999999999873 22221 110 0
Q ss_pred ------------hh--------------hhhHHhhhhhhhhccCcchHHH----HHHHHhh----hcHHHHHHHHHHHHH
Q 047983 80 ------------HS--------------ISLNMRMDDYLLLSESVYTTVG----AVPQILE----KTEEEFFSKITDILR 125 (233)
Q Consensus 80 ------------~~--------------~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~----~~~~~~~~~~~~~~~ 125 (233)
.+ ...........+.+.+.+.|.+ +++.+.+ ....++++++++.++
T Consensus 341 ~~~~~~~~~~~~~~~~~~p~~~~~i~rl~~~~~~~~~~~~~~~~~~~q~a~a~~a~~~L~~~~g~~~~~~~~~~~~~~~~ 420 (533)
T 3f6t_A 341 DKVELRQLHKRYSSVVLDPDKMKFIDRLCADSRSIGLYHTAGLSTPQQIMEALFSMTHLLTSTNGGSDDPYIDIARKLVS 420 (533)
T ss_dssp CHHHHHHHHHHHHTTCSCGGGCCHHHHHHHHHTTTTTGGGCSCCHHHHHHHHHHHHHHHTTCBGGGTBCHHHHHHHHHHH
T ss_pred chhhHHHHHhhhhccccCcchhhhHHHHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHhhhccccchHHHHHHHHHHHH
Confidence 00 0000112222233333344432 2334321 234578999999999
Q ss_pred HHHHHHHHHhhcCCCcccccCCCccEEEEEecCCCccccccccc-c-cCC---------CCChHHHHHHHHhccCEEEEC
Q 047983 126 EAADICCDRLKEIPCITCPKKPEGSMFVMYCGSEDKCLLKLNYS-L-LEG---------INSDTEFALKLAKEESIIVLP 194 (233)
Q Consensus 126 ~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~-~~~---------~~~~~~~~~~ll~~~gi~v~p 194 (233)
++++.+.+.|. + ++. +..|++|+|+| +.++.- . ..+ ..++.+++.++++++||.+.|
T Consensus 421 ~r~~~l~~~L~-~-~~~-~~~~~~g~~~~---------~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~ll~~~GV~v~p 488 (533)
T 3f6t_A 421 ERYDQLHDAMQ-A-PKD-ETDTNTHYYSL---------IDIYRLAEKIYGKEFRDYLTNNFEQVDFLLKLAEKNGVVLVD 488 (533)
T ss_dssp HHHHHHHHHHT-C-CCC-CSTTBCCSEEE---------EEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHTTSSSCT
T ss_pred HHHHHHHHhcC-C-Ccc-ccCCCceEEEE---------EehHhhhhhccchHHHHHhhccCCHHHHHHHHHHhCCEEEeC
Confidence 99999999997 6 454 36899999999 544310 0 000 013678888999999999999
Q ss_pred CcccCC-CCcEEEEeec-CHHHHHHHHHHHHHHHHHHhh
Q 047983 195 GITVGL-KDWLRITFAV-EPSAFEIGLGRMKAFYYRHAK 231 (233)
Q Consensus 195 g~~f~~-~~~~Rl~~~~-~~~~l~~~~~~l~~~l~~~~~ 231 (233)
|+.|+. .+++|+|++. +++++++++++|.++++++..
T Consensus 489 g~~f~~~~~~iRls~a~~~~e~i~~~i~~L~~~l~~~~~ 527 (533)
T 3f6t_A 489 GVGFGAKPGELRVSQANLPTEDYALIGKQVLELLKEYYE 527 (533)
T ss_dssp TEEECSSTTEEEEESSSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred CcccCCCCCEEEEEEeeCCHHHHHHHHHHHHHHHHHHHH
Confidence 999987 6899999996 899999999999999988753
No 50
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=99.85 E-value=3.6e-26 Score=198.36 Aligned_cols=199 Identities=16% Similarity=0.215 Sum_probs=147.4
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCC--ccCEEEEccCccccCCCCceEEEEEecCCCccccccchhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGS--IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAF 78 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~ 78 (233)
++|+++|++||++||+||+|.++.+++..+.++..+.. .++++++.|+||.|+++|+|+||++++++ .+++. +
T Consensus 187 ~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~-~~~~~--~-- 261 (392)
T 3b1d_A 187 EQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYAIIENP-TLCAQ--F-- 261 (392)
Confidence 46899999999999999999999988765556666644 67899999999999999999999999762 24432 1
Q ss_pred hhhhhhHHhhhhhhhh-ccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhc-CCCcccccCCCccEEEEEe
Q 047983 79 FHSISLNMRMDDYLLL-SESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKE-IPCITCPKKPEGSMFVMYC 156 (233)
Q Consensus 79 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~g~~~~~~ 156 (233)
.......++ +.++..+.++.+. ++ ...+++++.++.++++++.+.+.|++ ++++.. ..|.+++++|
T Consensus 262 -------~~~~~~~~~~~~~~~~~~a~~~~-l~-~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~~~~~~~~~-- 329 (392)
T 3b1d_A 262 -------KHQQLVNNHHEVSSLGYIATETA-YR-YGKPWLVALKAVLEENIQFAVEYFAQEAPRLKV-MKPQGTYLIW-- 329 (392)
Confidence 222222211 2233333233333 33 23568899999999999999999988 777764 7899999999
Q ss_pred cCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC--CCcEEEEeecCHHHHHHHHHHHHHHHH
Q 047983 157 GSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL--KDWLRITFAVEPSAFEIGLGRMKAFYY 227 (233)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~~Rl~~~~~~~~l~~~~~~l~~~l~ 227 (233)
++++.. +. +..++..++++++||.+.||+.|+. .+++|++++.+++++++++++|.++++
T Consensus 330 -------i~~~~~---~~-~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~e~i~~~l~~l~~~l~ 391 (392)
T 3b1d_A 330 -------LDFSDY---GL-TDDALFTLLHDQAKVILNRGSDYGSEGELHARLNIAAPKSLVEEICKRIVCCLP 391 (392)
Confidence 555321 11 2445555555688999999999974 689999999888899999999998875
No 51
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=99.91 E-value=7.9e-24 Score=185.19 Aligned_cols=197 Identities=16% Similarity=0.145 Sum_probs=144.4
Q ss_pred hHHHHH-HHcCcEEEEccccCccccCC-C--cccccccc----CCccCEEEEccCccccCCCCceEEEEEecCCCccccc
Q 047983 2 CIEETT-KKLGIMVIADEVYGHLVFGN-T--HFVPMGVF----GSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQD 73 (233)
Q Consensus 2 ~i~~l~-~~~~~~lI~De~y~~~~~~~-~--~~~~~~~~----~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~ 73 (233)
+|+++| ++||++||+||+|..+.+.+ . .+.++..+ +..+++|+++|+||. +++|+|+||+++++ ++++.
T Consensus 197 ~l~~~a~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~-~~~G~r~G~~~~~~--~~~~~ 273 (423)
T 3ez1_A 197 RLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFVVLARDAGYPDRAFVFASTSKI-TFAGAGLGFVASSE--DNIRW 273 (423)
T ss_dssp HHHTCCCSSTTCEEEEECTTSSCBCCSSSCCCCCCHHHHHHHHTCTTSEEEEEESTTT-SCSSSSCEEEEECH--HHHHH
T ss_pred HHHHHHHhccCCEEEEECCcchhhcCCCCCCCCcchhhhhhccCCCCeEEEEeCchhh-ccCCcceEEEEeCH--HHHHH
Confidence 688899 99999999999999766654 2 23344333 456899999999999 89999999999987 44421
Q ss_pred cchhhhhhhhhHHhhhhhhhhccCcchHHHHHHHHhhh--c-HHHHHHHHHHHHHHHHHHHHHHhhc-CCC----ccccc
Q 047983 74 LGVAFFHSISLNMRMDDYLLLSESVYTTVGAVPQILEK--T-EEEFFSKITDILREAADICCDRLKE-IPC----ITCPK 145 (233)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~-~~~~~~~~~~~~~~~~~~l~~~L~~-~~~----~~~~~ 145 (233)
+ .........+.+...+ .+...+++. . ..+++++.++.++++++.+.+.|.+ ++. +. +.
T Consensus 274 ---~--------~~~~~~~~~~~~~~~~-~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~-~~ 340 (423)
T 3ez1_A 274 ---L--------SKYLGAQSIGPNKVEQ-ARHVKFLTEYPGGLEGLMRDHAAIIAPKFRAVDEVLRAELGEGGEYAT-WT 340 (423)
T ss_dssp ---H--------HHHHHHSCSCCCHHHH-HHHHHHHHHSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSSEE-EC
T ss_pred ---H--------HHHHhhhccCCCHHHH-HHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCceE-Ee
Confidence 1 2223323333333333 444444444 2 4578899999999999998888865 433 43 36
Q ss_pred CCCccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEEC-CcccCC-----CCcEEEEeec-CHHHHHHH
Q 047983 146 KPEGSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLP-GITVGL-----KDWLRITFAV-EPSAFEIG 218 (233)
Q Consensus 146 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~p-g~~f~~-----~~~~Rl~~~~-~~~~l~~~ 218 (233)
.|.+|+|+| ++++. .+.+.+.+.|+++||.+.| |+.|+. .+++||+++. ++++++++
T Consensus 341 ~p~~g~~~~---------~~~~~-------~~~~~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~iRis~~~~~~~~i~~~ 404 (423)
T 3ez1_A 341 LPKGGYFIS---------LDTAE-------PVADRVVKLAEAAGVSLTPAGATYPAGQDPHNRNLRLAPTRPPVEEVRTA 404 (423)
T ss_dssp CCSBSSCEE---------EEESS-------SCHHHHHHHHHHTTEECCCTTTTSSTTCCSSSCEEEECCSSSCHHHHHHH
T ss_pred CCCccEEEE---------EECCC-------CcHHHHHHHHHHCCcEEecCcccccCCCCCCCCeEEEEcCCCCHHHHHHH
Confidence 789999999 55542 1456677778899999999 777752 5899999996 89999999
Q ss_pred HHHHHHHHHHHh
Q 047983 219 LGRMKAFYYRHA 230 (233)
Q Consensus 219 ~~~l~~~l~~~~ 230 (233)
+++|.+++++..
T Consensus 405 ~~~l~~~l~~~~ 416 (423)
T 3ez1_A 405 MQVVAACIRLAT 416 (423)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999998764
No 52
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=99.91 E-value=1.2e-23 Score=184.52 Aligned_cols=193 Identities=15% Similarity=0.173 Sum_probs=141.2
Q ss_pred hHHHHHHH-----cCcEEEEccccCccccCCCcccccc-ccCC-ccC---EEEEccCccccCCCCceEEEEEe---cCCC
Q 047983 2 CIEETTKK-----LGIMVIADEVYGHLVFGNTHFVPMG-VFGS-IVP---VLTLGSISKRWIVPGWRLGWLVT---SDPN 68 (233)
Q Consensus 2 ~i~~l~~~-----~~~~lI~De~y~~~~~~~~~~~~~~-~~~~-~~~---~i~~~s~sK~~~~~G~R~G~~~~---~~~~ 68 (233)
+|+++|++ ||+++|+||+|.++.+++..+.++. .++. .++ ++++.|+||.|+++|+|+||+++ ++
T Consensus 213 ~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~-- 290 (430)
T 2x5f_A 213 TIVEAIKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDGATKEFFAWGFRVGFMTFGTSDQ-- 290 (430)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEEEEHHHHTTCGGGCCEEEEEBCCCH--
T ss_pred HHHHHHHhhhhccCCEEEEEehhcccccCCcccchHHHHHHhhccCCcceEEEEEecccCCCCCCCCeEEEEEecCCH--
Confidence 68999999 9999999999999998775444554 4533 567 99999999999999999999999 65
Q ss_pred ccccccchhhhhhhhhHHhhhhh----hhhccCcchHHHHHHHHhh-hc-HHHHHHHHHHHHHHHHHHHHHHhh----cC
Q 047983 69 GILQDLGVAFFHSISLNMRMDDY----LLLSESVYTTVGAVPQILE-KT-EEEFFSKITDILREAADICCDRLK----EI 138 (233)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~-~~-~~~~~~~~~~~~~~~~~~l~~~L~----~~ 138 (233)
.+++. + ...... ...+.++..+ .++...++ .. ..+++++.++.++++++.+.+.|+ +.
T Consensus 291 ~~~~~--l---------~~~~~~~~~~~~~~~~~~~~-~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 358 (430)
T 2x5f_A 291 TTKEV--L---------EAKVKGLIRSNISSGPLPTQ-SAVKHVLKNNKQFDKEIEQNIQTLKERYEVTKEVVYADQYHS 358 (430)
T ss_dssp HHHHH--H---------HHHHHHHHHTTTSSCCHHHH-HHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHTCGGGTT
T ss_pred HHHHH--H---------HHHHhhhhhcccCCCChHHH-HHHHHHHccChHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCC
Confidence 34421 1 111111 1223333333 45555554 33 334556699999999999999998 44
Q ss_pred CCcccccCCCccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEee-cCHHHHHH
Q 047983 139 PCITCPKKPEGSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFA-VEPSAFEI 217 (233)
Q Consensus 139 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~-~~~~~l~~ 217 (233)
++.. ..|++|+|+| ++++ . . +..++..++++++||.+.|| ..+++|++++ .+++++++
T Consensus 359 -g~~~-~~~~~g~~~~---------~~~~-~----~-~~~~~~~~l~~~~gi~v~~g----~~~~iRis~~~~~~e~i~~ 417 (430)
T 2x5f_A 359 -HWQA-YDFNSGYFMA---------IKVH-D----V-DPEALRKHLIDKYSIGVIAL----NATDIRIAFSCVEKDDIPH 417 (430)
T ss_dssp -TEEE-CCCCBSSEEE---------EEES-S----S-CHHHHHHHHHHHHCEECEEC----SSSEEEEEGGGSCGGGHHH
T ss_pred -Ccee-eCCCceEEEE---------eCCC-C----C-CHHHHHHHHHHhCCEEEecC----CCCeEEEEEecCCHHHHHH
Confidence 4553 6788999999 6654 1 1 35566666665589999998 3579999999 68899999
Q ss_pred HHHHHHHHHHHH
Q 047983 218 GLGRMKAFYYRH 229 (233)
Q Consensus 218 ~~~~l~~~l~~~ 229 (233)
++++|.+++++.
T Consensus 418 ~~~~l~~~l~~~ 429 (430)
T 2x5f_A 418 VFDSIAKAIDDL 429 (430)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhc
Confidence 999999998764
No 53
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.90 E-value=1e-22 Score=177.60 Aligned_cols=194 Identities=21% Similarity=0.310 Sum_probs=143.8
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccC-CccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFG-SIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
+|+++|++||++||+||+|+++.+++ .+.++ +. ..++++++.|+||.++++|+|+||++++++ +++
T Consensus 198 ~i~~~~~~~~~~li~Dea~~~~~~~~-~~~~~--~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~-~l~--------- 264 (409)
T 2gb3_A 198 YLVEIAERHGLFLIVDEVYSEIVFRG-EFASA--LSIESDKVVVIDSVSKKFSACGARVGCLITRNE-ELI--------- 264 (409)
T ss_dssp HHHHHHHHTTCEEEEECTTTTCBCSS-CCCCG--GGSCCTTEEEEEESTTTTTCGGGCCEEEECSCH-HHH---------
T ss_pred HHHHHHHHcCCEEEEECcccccccCC-CCCCc--cccCCCCEEEEecchhccCCccceEEEEEECcH-HHH---------
Confidence 68999999999999999999998876 33333 22 236789999999999999999999999862 233
Q ss_pred hhhhHHhhhhhhh-hccCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecC
Q 047983 81 SISLNMRMDDYLL-LSESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGS 158 (233)
Q Consensus 81 ~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~ 158 (233)
..+..... .. +++... .++...++. ..++++++++.++++++.+.+.|+++ ++..+..|.+|+|+|
T Consensus 265 -----~~l~~~~~~~~-~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~---- 332 (409)
T 2gb3_A 265 -----SHAMKLAQGRL-APPLLEQIGSVGLLNL-DDSFFDFVRETYRERVETVLKKLEEH-GLKRFTKPSGAFYIT---- 332 (409)
T ss_dssp -----HHHHHHHHHSC-CCCHHHHHHHHHHHTC-CHHHHHHHHHHHHHHHHHHHHHHHHT-TCCCBCCCSBSSEEE----
T ss_pred -----HHHHHHHhccC-CCCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHHc-CceeeeCCCeeEEEE----
Confidence 22222211 11 233333 444444533 36688999999999999999999887 554325688899999
Q ss_pred CCcccccccccccCCCCChHHHHHHHHhc-----cCEEEECCcccCC-----CCcEEEEeecCHHHHHHHHHHHHHHHHH
Q 047983 159 EDKCLLKLNYSLLEGINSDTEFALKLAKE-----ESIIVLPGITVGL-----KDWLRITFAVEPSAFEIGLGRMKAFYYR 228 (233)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~-----~gi~v~pg~~f~~-----~~~~Rl~~~~~~~~l~~~~~~l~~~l~~ 228 (233)
++++ +. +..++..+++++ +||.+.||+.|+. .+++|++++.+++++++++++|.+++++
T Consensus 333 -----~~~~-----~~-~~~~l~~~l~~~~~~~~~gi~v~~g~~f~~~~~~~~~~iRis~~~~~e~i~~~~~~l~~~l~~ 401 (409)
T 2gb3_A 333 -----AELP-----VE-DAEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIACVLEKDLLSRAIDVLMEGLKM 401 (409)
T ss_dssp -----EECS-----SS-CHHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEEEECCSCHHHHHHHHHHHHHHHHH
T ss_pred -----EEeC-----CC-CHHHHHHHHHhccccccCcEEEeCchHhCCCCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHH
Confidence 5554 11 355666666655 5999999999964 5899999999999999999999999988
Q ss_pred Hhh
Q 047983 229 HAK 231 (233)
Q Consensus 229 ~~~ 231 (233)
+.+
T Consensus 402 ~~~ 404 (409)
T 2gb3_A 402 FCS 404 (409)
T ss_dssp HHC
T ss_pred hhh
Confidence 754
No 54
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=99.90 E-value=3.2e-24 Score=186.62 Aligned_cols=180 Identities=18% Similarity=0.190 Sum_probs=128.0
Q ss_pred cC--cEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEe-cCCCccccccchhhhhhhhhHH
Q 047983 10 LG--IMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVT-SDPNGILQDLGVAFFHSISLNM 86 (233)
Q Consensus 10 ~~--~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~-~~~~~~~~~~~~~~~~~~~~~~ 86 (233)
|+ ++||+||+|.+ + ...++.. ..+++|+++||||.|++||+|+||+++ ++ .+++. + .
T Consensus 182 ~~~~~~ii~De~y~~----~-~~~~l~~--~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~--~l~~~---l--------~ 241 (391)
T 3bwn_A 182 DDDEAKVIHDFAYYW----P-HYTPITR--RQDHDIMLFTFSKITGHAGSRIGWALVKDK--EVAKK---M--------V 241 (391)
T ss_dssp --CCCEEEEECTTCS----T-TTSCCCC--CBCCSEEEEEHHHHHSCGGGCEEEEEECCH--HHHHH---H--------H
T ss_pred hcCCCEEEEeCCCCC----C-CCCcccc--CCCCeEEEEechhhcCCCccceEEEEecCH--HHHHH---H--------H
Confidence 55 99999999984 2 2223332 457899999999999999999999998 54 34421 1 2
Q ss_pred hhhhhhhhccCcchHHHHHHHHhhhcH---------HHHHHHHHHHHHHHHHHHHHHhhcCCCcccccC-----------
Q 047983 87 RMDDYLLLSESVYTTVGAVPQILEKTE---------EEFFSKITDILREAADICCDRLKEIPCITCPKK----------- 146 (233)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~l~~~~---------~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~----------- 146 (233)
..+.....+.+...| .++...++... +++++++++.++++++.+.+.|++++++.. ..
T Consensus 242 ~~~~~~~~~~~~~~q-~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~p~~~~~~f~~~ 319 (391)
T 3bwn_A 242 EYIIVNSIGVSKESQ-VRTAKILNVLKETCKSESESENFFKYGREMMKNRWEKLREVVKESDAFTL-PKYPEAFCNYFGK 319 (391)
T ss_dssp HHHHHHHSSCCHHHH-HHHHHHHHHHHHHTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHTCSSEEC-CCCCCEEETTTTE
T ss_pred HHhcccccCCCHHHH-HHHHHHHhCcchhccccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCccc-ccCCccccccccc
Confidence 333333344444444 44444454432 468999999999999999999998765543 33
Q ss_pred --CCccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC-CCcEEEEeecCHHHHHHHHHHHH
Q 047983 147 --PEGSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL-KDWLRITFAVEPSAFEIGLGRMK 223 (233)
Q Consensus 147 --~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~-~~~~Rl~~~~~~~~l~~~~~~l~ 223 (233)
|.+|+|+| ++++ . .+.+.++|+++||.+.||+.|+. .+++|+|++.+++++++++++|.
T Consensus 320 ~~~~~g~~~~---------~~~~--~-------~~~~~~~l~~~gV~v~pg~~fg~~~~~iRis~~~~~e~i~~~~~~L~ 381 (391)
T 3bwn_A 320 SLESYPAFAW---------LGTK--E-------ETDLVSELRRHKVMSRAGERCGSDKKHVRVSMLSREDVFNVFLERLA 381 (391)
T ss_dssp EECCCCSEEE---------EEES--S-------SCCHHHHHHHTTEECEEGGGGTCCTTEEEEESCSCHHHHHHHHHHHH
T ss_pred cCCCcceEEE---------ecCC--c-------HHHHHHHHHHCCEEEccCCCCCCCCCEEEEEecCCHHHHHHHHHHHH
Confidence 34566999 5553 1 23566778899999999999986 78999999998999999999999
Q ss_pred HHHHHH
Q 047983 224 AFYYRH 229 (233)
Q Consensus 224 ~~l~~~ 229 (233)
+++++.
T Consensus 382 ~~~~~~ 387 (391)
T 3bwn_A 382 NMKLIK 387 (391)
T ss_dssp SCC---
T ss_pred HHHHhh
Confidence 887654
No 55
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=99.90 E-value=3.7e-23 Score=180.69 Aligned_cols=191 Identities=14% Similarity=0.127 Sum_probs=135.7
Q ss_pred hHHHHHH------HcCcEEEEccccCccccCCCccccccc-cC-CccC--EEEEccCccccCCCCceEEEEEe---cCCC
Q 047983 2 CIEETTK------KLGIMVIADEVYGHLVFGNTHFVPMGV-FG-SIVP--VLTLGSISKRWIVPGWRLGWLVT---SDPN 68 (233)
Q Consensus 2 ~i~~l~~------~~~~~lI~De~y~~~~~~~~~~~~~~~-~~-~~~~--~i~~~s~sK~~~~~G~R~G~~~~---~~~~ 68 (233)
+|+++|+ +||++||+||+|.++.+++....++.. .. ..++ +|+++|+||.|+++|+|+||+++ ++
T Consensus 204 ~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~-- 281 (418)
T 3rq1_A 204 SILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDEVRAFFNKFSHLPKEILTCVCYSLSKGFTMYGQRVGAMIGISDDE-- 281 (418)
T ss_dssp HHHHHHHHHHHTSSCEEEEEEECTTGGGSSCHHHHHGGGGGGTTCCTTEEEEEEEESTTTTTCCSSCCEEEEEEESSH--
T ss_pred HHHHHHHHhhhccCCCeEEEEecccccccCChHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCcCCcceEEEEEeCCH--
Confidence 5777887 899999999999999877643333322 11 2234 68999999999999999999998 54
Q ss_pred ccccccchhhhhhhhhHHhhhhhhh--hccCcchHH-HHHHHHhhhc-----HHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 047983 69 GILQDLGVAFFHSISLNMRMDDYLL--LSESVYTTV-GAVPQILEKT-----EEEFFSKITDILREAADICCDRLKEIPC 140 (233)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~l~~~-----~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 140 (233)
++++. + ........ ...+++... .++..+++.. ..++.+++++.++++++.+.+.|+++ +
T Consensus 282 ~~~~~---~--------~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g 349 (418)
T 3rq1_A 282 EIADE---F--------FEVNKSTSRATWSNICRPAMRTMANIVADPAKFKEYEAERNCYYQLIRDRADIFKQEAAQV-G 349 (418)
T ss_dssp HHHHH---H--------HHHHHHHHHHHTSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-T
T ss_pred HHHHH---H--------HHHHHHHHhhccCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-C
Confidence 34431 1 22222211 111233333 4445555443 23455678899999999999999887 5
Q ss_pred cccccCCCccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec-CHHHHHHHH
Q 047983 141 ITCPKKPEGSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV-EPSAFEIGL 219 (233)
Q Consensus 141 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~-~~~~l~~~~ 219 (233)
+.. ..|++++|+| +.++ +..++. +.|.++||.+.||. +++|+|++. +++++++++
T Consensus 350 ~~~-~~~~~~~~~~---------~~~~--------~~~~~~-~~l~~~gi~v~~g~-----~~iRis~~~~~~~~i~~~~ 405 (418)
T 3rq1_A 350 LPM-LPYRGGFFIT---------IPTD--------SANAIC-EELKKEHIYVIALA-----NGIRIAACGIPKCQMTGLA 405 (418)
T ss_dssp CCC-CCCCSSSEEE---------EECT--------THHHHH-HHHHHTTEECEECS-----SEEEEEGGGSCHHHHTTHH
T ss_pred CCC-CCCCceEEEE---------cCCC--------CHHHHH-HHHHhCCEEEecCC-----CCeEEEEecCCHHHHHHHH
Confidence 654 6899999999 4332 244554 56788999999984 789999985 999999999
Q ss_pred HHHHHHHHHHh
Q 047983 220 GRMKAFYYRHA 230 (233)
Q Consensus 220 ~~l~~~l~~~~ 230 (233)
++|.+++++..
T Consensus 406 ~~l~~~l~~~~ 416 (418)
T 3rq1_A 406 EKIYNAMKSLG 416 (418)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHHh
Confidence 99999998764
No 56
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=99.90 E-value=6.4e-23 Score=179.92 Aligned_cols=205 Identities=16% Similarity=0.078 Sum_probs=140.5
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccc----cc-cccCC-ccCEEEEccCccccCCCCceEEEEEecCCCcccc-cc
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFV----PM-GVFGS-IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQ-DL 74 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~----~~-~~~~~-~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~-~~ 74 (233)
+|+++|++||++||+||+|+++.+++.... ++ ..+.. .++++++.|+||.++++|+|+||+++++ ++++ .+
T Consensus 206 ~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--~~~~~~~ 283 (437)
T 3g0t_A 206 IIGELATKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQPSVANYTDNYILALSSSKAFSYAGQRIGVLMISG--KLYEREY 283 (437)
T ss_dssp HHHHHHHHTTCEEEEECTTTTCCTTSCCCSTTSSCCCCCGGGTCSCEEEEEESTTTTSCGGGCCEEEEECH--HHHHCBC
T ss_pred HHHHHHHHCCcEEEEEcchhhcccCCCcCcccccchhhccCCCCCcEEEEEcCccCCCCccceeEEEEECH--HHhhhhh
Confidence 689999999999999999999988743211 11 34433 6889999999999999999999999987 4442 10
Q ss_pred chhhhhhhhh------HHhhhhhhhhccCcchHHHHHHHHhhhcHHHH---HHHHHHHHHHHHHHHHHHhhcCCCccccc
Q 047983 75 GVAFFHSISL------NMRMDDYLLLSESVYTTVGAVPQILEKTEEEF---FSKITDILREAADICCDRLKEIPCITCPK 145 (233)
Q Consensus 75 ~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 145 (233)
......-..+ ..........+.++..+ .++...++. ...+ +++.++.++++++.+.+.|+++ ++.. .
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~a~~~~l~~-~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~ 359 (437)
T 3g0t_A 284 PDLEESFGRLRFGEALSSSALYALSSGATHSAQ-WGMAAMLKA-CNDGEYNFRDSVIEYGRKARIMKKMFLDN-GFNI-V 359 (437)
T ss_dssp GGGHHHHSCSBHHHHHHTTHHHHHHSSSCHHHH-HHHHHHHHH-HHTTSCCHHHHHHHHHHHHHHHHHHHHTT-TEEE-S
T ss_pred hcccccccccchhHHHHHHHHhhhcCCCCHHHH-HHHHHHHhC-cHhHHHHHHHHHHHHHHHHHHHHHHHHHc-CCEE-e
Confidence 0000000000 02222222233333333 444444432 2223 8899999999999999999988 6654 4
Q ss_pred -------CCCccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCC--CcEEEEeec-CHHHH
Q 047983 146 -------KPEGSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLK--DWLRITFAV-EPSAF 215 (233)
Q Consensus 146 -------~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~--~~~Rl~~~~-~~~~l 215 (233)
++.+++|+| +.++ +. +..++..+ |.++||.+.||..|+.. +++|+|++. +++++
T Consensus 360 ~~~~~~~~~~~~~~~~---------~~~~-----~~-~~~~l~~~-L~~~gi~v~~~~~~~~~~~~~iRis~~~~~~e~i 423 (437)
T 3g0t_A 360 YDKDGNEPLADGFYFT---------VGYK-----GM-DSSKLIEK-FVRYGMCAITLKTTGSKRNEAMRICTSLLPESQF 423 (437)
T ss_dssp SCEETTEECCSSSEEE---------EEET-----TC-CHHHHHHH-HHHTTEECEESTTTTCCCTTCEEEECSSSCGGGH
T ss_pred ccccCCCCCceeEEEE---------EecC-----CC-CHHHHHHH-HHHcCeEEeeccccCCCCCCEEEEEEecCCHHHH
Confidence 348999999 6554 11 34455554 55679999999988763 899999997 89999
Q ss_pred HHHHHHHHHHHHH
Q 047983 216 EIGLGRMKAFYYR 228 (233)
Q Consensus 216 ~~~~~~l~~~l~~ 228 (233)
++++++|.+++++
T Consensus 424 ~~~~~~l~~~~~~ 436 (437)
T 3g0t_A 424 PDLEKRLQMLNAE 436 (437)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc
Confidence 9999999988754
No 57
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=99.89 E-value=3e-22 Score=176.22 Aligned_cols=200 Identities=17% Similarity=0.251 Sum_probs=139.6
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHS 81 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~ 81 (233)
+|+++|++||++||+||+|+.+..+ ....... ....++++++.|+||. +++|+|+||+++++ .+++. +
T Consensus 230 ~i~~~a~~~~~~li~De~~~~~~~~-~~~~~~~-~~~~~~~i~~~S~sK~-~~~G~r~G~~~~~~--~l~~~---~---- 297 (444)
T 3if2_A 230 HLAEIAKRYDIPLIIDNAYGMPFPN-IIYSDAH-LNWDNNTILCFSLSKI-GLPGMRTGIIVADA--KVIEA---V---- 297 (444)
T ss_dssp HHHHHHHHTTCCEEEECTTCTTTTC-CBCSCCC-CCCCTTEEEEEESTTT-TCGGGCCEEEECCH--HHHHH---H----
T ss_pred HHHHHHHHCCCEEEEECCCCCcccc-ccccccc-ccCCCCEEEEechhhc-cCCCCceEEEEECH--HHHHH---H----
Confidence 6889999999999999999864321 1111111 1335789999999997 99999999999977 34421 1
Q ss_pred hhhHHhhhhhhhhccCcchHHHHHHHHhhhc-HHHHHHH-HHHHHHHHHHHHHHHhhc-CCCcc-cccCCCccEEEEEec
Q 047983 82 ISLNMRMDDYLLLSESVYTTVGAVPQILEKT-EEEFFSK-ITDILREAADICCDRLKE-IPCIT-CPKKPEGSMFVMYCG 157 (233)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~-~~~~~~~~~~~l~~~L~~-~~~~~-~~~~~~~g~~~~~~~ 157 (233)
........++.++..+ .++..+++.. ..++..+ +++.++++++.+.+.|++ ++++. .+..|.+|+|+|
T Consensus 298 ----~~~~~~~~~~~~~~~~-~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~--- 369 (444)
T 3if2_A 298 ----SAMNAVVNLAPTRFGA-AIATPLVANDRIKQLSDNEIKPFYQKQATLAVKLLKQALGDYPLMIHKPEGAIFLW--- 369 (444)
T ss_dssp ----HHHHHHHHSSCCCHHH-HHHHHHHHTSHHHHHHHHTHHHHHHHHHHHHHHHHHHHSSSSSEEEECCCBSSEEE---
T ss_pred ----HHHHHhccCCCChHHH-HHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEecCCccEEEE---
Confidence 2233333344444444 4444444443 3445555 788999999999999877 65431 135688999999
Q ss_pred CCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC----------CCcEEEEeecCHHHHHHHHHHHHHHHH
Q 047983 158 SEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL----------KDWLRITFAVEPSAFEIGLGRMKAFYY 227 (233)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~----------~~~~Rl~~~~~~~~l~~~~~~l~~~l~ 227 (233)
+.++.. +. +..++ ...|.++||.+.||+.|.. .+++|++++.+++++++++++|.++++
T Consensus 370 ------~~~~~~---~~-~~~~l-~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~~iRis~~~~~e~i~~~l~~l~~~~~ 438 (444)
T 3if2_A 370 ------LWFKDL---PI-STLDL-YERLKAKGTLIVPSEYFFPGVDVSDYQHAHECIRMSIAADEQTLIDGIKVIGEVVR 438 (444)
T ss_dssp ------EEETTC---SS-CHHHH-HHHHHHTTEECEEGGGSCTTCCCTTCSGGGSEEEEESSSCHHHHHHHHHHHHHHHH
T ss_pred ------EEcCCC---CC-CHHHH-HHHHHHCCeEEecchhhcCCCCCcccccCCCeEEEEEeCCHHHHHHHHHHHHHHHH
Confidence 655431 11 24444 4556788999999999853 268999999999999999999999998
Q ss_pred HHhhc
Q 047983 228 RHAKK 232 (233)
Q Consensus 228 ~~~~~ 232 (233)
+..++
T Consensus 439 ~~~~~ 443 (444)
T 3if2_A 439 ELYDN 443 (444)
T ss_dssp HHHTC
T ss_pred HHHcc
Confidence 87654
No 58
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=99.89 E-value=7.3e-23 Score=179.74 Aligned_cols=193 Identities=15% Similarity=0.015 Sum_probs=135.2
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccc--c-ccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPM--G-VFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVA 77 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~--~-~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~ 77 (233)
++|+++|+++++++|+||+|.+|.+++....+. . ..+..++++++.||||.|+++|||+||++++.. ..+.+.-+
T Consensus 213 ~~i~~~~~~~~~~~~~D~~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RvG~~~~~~~--~~~~~~~~ 290 (420)
T 4h51_A 213 NEIASLMLAKHHQVFFDSAYQGYASGSLDTDAYAARLFARRGIEVLLAQSFSKNMGLYSERAGTLSLLLK--DKTKRADV 290 (420)
T ss_dssp HHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTSCCGGGCEEEEEEECS--CHHHHHHH
T ss_pred HHHHHHHHhcCceEeeehhhhhhccCCcccchHHHHhHHhhCceEEEEeccccccccccCceEEEEeccc--CHHHHHHH
Confidence 378999999999999999999999886432221 1 224557899999999999999999999999873 33210000
Q ss_pred hhhhhhhHHhhhhhhh-hccCcchHH-HHHHHHhhhc-----HHHHHHHHHHHHHHHHHHHHHHhhcCC---CcccccCC
Q 047983 78 FFHSISLNMRMDDYLL-LSESVYTTV-GAVPQILEKT-----EEEFFSKITDILREAADICCDRLKEIP---CITCPKKP 147 (233)
Q Consensus 78 ~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~l~~~-----~~~~~~~~~~~~~~~~~~l~~~L~~~~---~~~~~~~~ 147 (233)
. ..+..... ...+++... .+++.++.+. +.++++.++++++++|+.+.+.|++++ .|. +..+
T Consensus 291 --~-----~~l~~~~r~~~s~~p~~~a~~~~~~l~d~~l~~~~~~~~~~m~~r~~~~R~~l~~~L~~~g~~~~~~-~i~~ 362 (420)
T 4h51_A 291 --K-----SVMDSLIREEYTCPPAHGARLAHLILSNNELRKEWEAELSAMAERIRTMRRTVYDELLRLQTPGSWE-HVIN 362 (420)
T ss_dssp --H-----HHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCT-HHHH
T ss_pred --H-----HHHHHhhhcccCcchHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCC-eecC
Confidence 0 11111111 222334443 5555555442 356788899999999999999998853 233 2567
Q ss_pred CccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec-CHHHHHHHHHHHHHHH
Q 047983 148 EGSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV-EPSAFEIGLGRMKAFY 226 (233)
Q Consensus 148 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~-~~~~l~~~~~~l~~~l 226 (233)
++|+|.| +++ +.+.+ ++|+++||.++|++ |||++. ++++++.+.++|.+++
T Consensus 363 q~GmF~~-----------~gl--------s~e~v-~~L~e~~Vy~~~~g--------Ris~Agl~~~ni~~~a~aI~~vv 414 (420)
T 4h51_A 363 QIGMFSF-----------LGL--------SKAQC-EYCQNHNIFITVSG--------RANMAGLTHETALMLAQTINDAV 414 (420)
T ss_dssp CCSSEEE-----------CCC--------CHHHH-HHHHHTTEECCTTC--------EEEGGGCCHHHHHHHHHHHHHHH
T ss_pred CCceEEe-----------cCc--------CHHHH-HHHHhCCEEEcCCC--------EEEeccCCHHHHHHHHHHHHHHH
Confidence 8899999 654 33444 46788999999864 999997 9999999999999999
Q ss_pred HHHhh
Q 047983 227 YRHAK 231 (233)
Q Consensus 227 ~~~~~ 231 (233)
++..+
T Consensus 415 r~i~r 419 (420)
T 4h51_A 415 RNVNR 419 (420)
T ss_dssp C----
T ss_pred HHhhc
Confidence 87654
No 59
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=99.89 E-value=1e-22 Score=177.62 Aligned_cols=189 Identities=16% Similarity=0.110 Sum_probs=133.7
Q ss_pred hHHHHHH------HcCcEEEEccccCccccCCCcccccccc-C-CccC--EEEEccCccccCCCCceEEEEEe---cCCC
Q 047983 2 CIEETTK------KLGIMVIADEVYGHLVFGNTHFVPMGVF-G-SIVP--VLTLGSISKRWIVPGWRLGWLVT---SDPN 68 (233)
Q Consensus 2 ~i~~l~~------~~~~~lI~De~y~~~~~~~~~~~~~~~~-~-~~~~--~i~~~s~sK~~~~~G~R~G~~~~---~~~~ 68 (233)
+|+++|+ +||++||+||+|.+|.+++....++... . ..++ +|+++|+||.|+++|+|+||+++ ++
T Consensus 203 ~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~riG~~~~~~~~~-- 280 (413)
T 3t18_A 203 EVITFLKEKAEDKDKKITLIVDVAYLEFAGDGDQQRKFFEKFSNLPRNLFVVVAFSMSKSHTAYGLRSGAAVGISSSK-- 280 (413)
T ss_dssp HHHHHHHHHTTSTTCEEEEEEECTTGGGSSSSSTTTGGGGGGTTCCTTEEEEEEEEHHHHTTCGGGCCEEEEEEESCH--
T ss_pred HHHHHHHHHhhccCCcEEEEEecccccccCChhhHHHHHHHHhhcCCCeeEEEEEecCccCCCcCcCcEEEEEecCCH--
Confidence 5778888 8999999999999999887654444322 2 2234 58999999999999999999998 54
Q ss_pred ccccccchhhhhhhhhHHhhhhhhhhc--cCcchHH-HHHHHHhhhc----HHHHHHHHHHHHHHHHHHHHHHhhcCCCc
Q 047983 69 GILQDLGVAFFHSISLNMRMDDYLLLS--ESVYTTV-GAVPQILEKT----EEEFFSKITDILREAADICCDRLKEIPCI 141 (233)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~l~~~----~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 141 (233)
++++. + .........+ .+++... .++...++.. ..++.+++++.++++++.+.+.|+++ ++
T Consensus 281 ~~~~~---~--------~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~ 348 (413)
T 3t18_A 281 EIIEE---F--------EASLAHSARCNWSNGTHAAQNILIELERAENKKIYEQELVDLRNMLKSRADVFVTAAKEN-KL 348 (413)
T ss_dssp HHHHH---H--------HHHHHHHHHHHTSSCCHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TC
T ss_pred HHHHH---H--------HHHHHHhhhccccCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CC
Confidence 44431 1 2222222211 1233333 4455555443 34567788999999999999999887 66
Q ss_pred ccccCCCccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec-CHHHHHHHHH
Q 047983 142 TCPKKPEGSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV-EPSAFEIGLG 220 (233)
Q Consensus 142 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~-~~~~l~~~~~ 220 (233)
.. ..|++++|+| ++.. ++.++. +.|.++||.+.|| .+++|++++. +++++ ++
T Consensus 349 ~~-~~~~~~~~~~-----------~~~~------~~~~~~-~~l~~~gv~v~~g-----~~~iRis~~~~~~~~~---l~ 401 (413)
T 3t18_A 349 TM-IPYFGGFFTF-----------IPTD------KAFDIV-KDLEKENIFTIPS-----AKGIRVAICGVGEEKI---PK 401 (413)
T ss_dssp CC-BCCCSSSCEE-----------EECS------CHHHHH-HHHHHTTEECEEC-----SSEEEECTTTSCGGGH---HH
T ss_pred Cc-cCCCceEEEE-----------eCCC------CHHHHH-HHHHhCCEEEecC-----CCceEEEEeeCCHHHH---HH
Confidence 64 6899999999 4331 245555 4567889999997 4799999996 66665 89
Q ss_pred HHHHHHHHHhh
Q 047983 221 RMKAFYYRHAK 231 (233)
Q Consensus 221 ~l~~~l~~~~~ 231 (233)
+|.+++++..+
T Consensus 402 ~l~~~l~~~~~ 412 (413)
T 3t18_A 402 LVQRLAFYTNK 412 (413)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHhc
Confidence 99999887754
No 60
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=99.89 E-value=3.6e-22 Score=171.31 Aligned_cols=181 Identities=17% Similarity=0.229 Sum_probs=128.4
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCcccccccc-CCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVF-GSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
+|+++|+ +|+++|+||+|.++..+ .++..+ +..++++++.|+||.|+++|+|+||+++++ +++
T Consensus 170 ~l~~~~~-~~~~li~De~~~~~~~~----~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~--~~~--------- 233 (356)
T 1fg7_A 170 TLLELTR-GKAIVVADEAYIEFCPQ----ASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLANE--EVI--------- 233 (356)
T ss_dssp HHHHHHT-TTCEEEEECTTGGGSGG----GCSGGGTTTCTTEEEEEESSSTTCCGGGCCEEEEECH--HHH---------
T ss_pred HHHHhCC-CCCEEEEEccchhhcCC----CcHHHHHhhCCCEEEEecchHhhcCchhhhEEEEeCH--HHH---------
Confidence 4667777 99999999999997621 122222 455789999999999999999999999976 333
Q ss_pred hhhhHHhhhhhhh-hccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCC
Q 047983 81 SISLNMRMDDYLL-LSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSE 159 (233)
Q Consensus 81 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~ 159 (233)
..+..... ++.++..+ .+..+.++....+++++.++.++++++.+.+.|++++++.. ..|.+|+|+|
T Consensus 234 -----~~l~~~~~~~~~~~~~~-~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~~----- 301 (356)
T 1fg7_A 234 -----NLLMKVIAPYPLSTPVA-DIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEIPCVEQ-VFDSETNYIL----- 301 (356)
T ss_dssp -----HHHHHHSCSSCSCHHHH-HHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEE-ECCCSSSEEE-----
T ss_pred -----HHHHHhcCCCCCCHHHH-HHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHhCCCceE-ECCCCCeEEE-----
Confidence 33332211 23333333 33444444332245899999999999999999998865332 3566888999
Q ss_pred CcccccccccccCCCCChHHHHHHHHhccCEEEEC-CcccCCCCcEEEEeecCHHHHHHHHHHHHH
Q 047983 160 DKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLP-GITVGLKDWLRITFAVEPSAFEIGLGRMKA 224 (233)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~p-g~~f~~~~~~Rl~~~~~~~~l~~~~~~l~~ 224 (233)
++++ +..++..+ |.++||.+.| |+.|+..+++|++++. +++++++++.|++
T Consensus 302 ----~~~~--------~~~~l~~~-L~~~gI~v~~~g~~~~~~~~iRis~~~-~~e~~~~~~~l~~ 353 (356)
T 1fg7_A 302 ----ARFK--------ASSAVFKS-LWDQGIILRDQNKQPSLSGCLRITVGT-REESQRVIDALRA 353 (356)
T ss_dssp ----EEET--------THHHHHHH-HHHTTEECEECTTSTTCTTEEEEECCC-HHHHHHHHHHHHT
T ss_pred ----EECC--------CHHHHHHH-HHHCCEEEEECCCCCCCCCeEEEEeCC-HHHHHHHHHHHHh
Confidence 5553 24555555 4788999999 8888877899999984 6677888877764
No 61
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=99.89 E-value=6.5e-22 Score=169.46 Aligned_cols=184 Identities=12% Similarity=0.148 Sum_probs=133.6
Q ss_pred hHHHHHHHc--CcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 2 CIEETTKKL--GIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 2 ~i~~l~~~~--~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
+|.++|+.+ |+++|+||+|+++.+ +.........+..++++++.|+||.++++|+|+||+++++ +++
T Consensus 176 ~l~~l~~~~~~~~~li~De~~~~~~~-~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~--~~~-------- 244 (363)
T 3ffh_A 176 DIQAFLDRVPSDVLVVLDEAYIEYVT-PQPEKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIADK--EII-------- 244 (363)
T ss_dssp HHHHHHTTSCTTSEEEEECTTGGGCS-SCCCCCGGGGGTCTTEEEEEESSSTTCCSSCCCEEEEECH--HHH--------
T ss_pred HHHHHHHhCCCCcEEEEeCchHhhcC-ccccCHHHHhhcCCCEEEEeechhhhcCchhceeeeecCH--HHH--------
Confidence 566677766 999999999999887 4333344444567899999999999999999999999976 333
Q ss_pred hhhhhHHhhhhhhhhccCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecC
Q 047983 80 HSISLNMRMDDYLLLSESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGS 158 (233)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~ 158 (233)
..+..... ..+.+... .+....++ ..+++++.++.++++++.+.+.|+++.++.. .++ .|.|+|
T Consensus 245 ------~~l~~~~~-~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~-~~~-~~~~~~---- 309 (363)
T 3ffh_A 245 ------RQLNIVRP-PFNTTSIGQKLAIEAIK--DQAFIGECRTSNANGIKQYEAFAKRFEKVKL-YPA-NGNFVL---- 309 (363)
T ss_dssp ------HHHHHTCC-SCCCBHHHHHHHHHHHH--CHHHHHHHHHHHHHHHHHHHHHHHHCTTCEE-CCC-CSSEEE----
T ss_pred ------HHHHHhCC-CCCCCHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHHHhhCCCceE-CCC-CCeEEE----
Confidence 33332222 22233333 44444443 2378899999999999999999998556654 444 567789
Q ss_pred CCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeecCHHHHHHHHHHHHHH
Q 047983 159 EDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAVEPSAFEIGLGRMKAF 225 (233)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~~~~~l~~~~~~l~~~ 225 (233)
++++. +..++. +.|.++||.+.||+.|+..+++|++++ ++++++++++.|+++
T Consensus 310 -----~~~~~-------~~~~~~-~~l~~~gi~v~~g~~~~~~~~iRis~~-~~~~i~~~~~~l~~~ 362 (363)
T 3ffh_A 310 -----IDLGI-------EAGTIF-SYLEKNGYITRSGAALGFPTAVRITIG-KEEDNSAVIALLEKL 362 (363)
T ss_dssp -----EECSS-------CHHHHH-HHHHHTTEECEETTTTTCTTEEEEECC-CHHHHHHHHHHHHHH
T ss_pred -----EECCC-------CHHHHH-HHHHHCCeEEEeCccCCCCCeEEEECC-CHHHHHHHHHHHHHh
Confidence 55431 244444 445577999999999988899999998 777889999888765
No 62
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=99.88 E-value=4.5e-22 Score=170.75 Aligned_cols=188 Identities=20% Similarity=0.276 Sum_probs=131.0
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEE-ecCCCccccccchhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLV-TSDPNGILQDLGVAFFH 80 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~-~~~~~~~~~~~~~~~~~ 80 (233)
+|+++|++||+++|+||+|.++.+++... +..++..++++++.|+||.++++|+|+||++ +++ +++
T Consensus 170 ~i~~~~~~~~~~li~De~~~~~~~~~~~~--~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~--~~~--------- 236 (364)
T 1lc5_A 170 AIADRCKSLNINLILDEAFIDFIPHETGF--IPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDD--AAM--------- 236 (364)
T ss_dssp HHHHHHHHHTCEEEEECTTGGGSTTCCCS--GGGCTTCTTEEEEEESTTTTTCTTTCCEEEECCCH--HHH---------
T ss_pred HHHHHhhhcCcEEEEECcChhhccCccch--hhHhccCCCEEEEEECchhhcCCccceEEEEECCH--HHH---------
Confidence 68999999999999999999988763222 2223455789999999999999999999999 766 333
Q ss_pred hhhhHHhhhhhh-hhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCC
Q 047983 81 SISLNMRMDDYL-LLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSE 159 (233)
Q Consensus 81 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~ 159 (233)
..+.... .++.++..+ .+..+.++. .+++++.++.++++++.+.+.|++++++.. .+ .+|.|+|
T Consensus 237 -----~~l~~~~~~~~~~~~~~-~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~-~~g~~~~----- 301 (364)
T 1lc5_A 237 -----ARMRRQQMPWSVNALAA-LAGEVALQD--SAWQQATWHWLREEGARFYQALCQLPLLTV-YP-GRANYLL----- 301 (364)
T ss_dssp -----HHHHHHSCTTCSCHHHH-HHHHHGGGC--HHHHHHHHHHHHHHHHHHHHHHHTSTTEEE-CC-CSSSEEE-----
T ss_pred -----HHHHHhCCCCCCCHHHH-HHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHHhcCCCCEE-CC-CCCeEEE-----
Confidence 3333221 233333322 444455543 468899999999999999999998877764 44 4566778
Q ss_pred CcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC--CCcEEEEeecCHHHHHHHHHHHHHHHHHHh
Q 047983 160 DKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL--KDWLRITFAVEPSAFEIGLGRMKAFYYRHA 230 (233)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~~Rl~~~~~~~~l~~~~~~l~~~l~~~~ 230 (233)
++++. +..++... |.++||.+.||+.|+. .+++|++++. .++++++++.|.+++++.+
T Consensus 302 ----~~~~~-------~~~~l~~~-l~~~gi~v~~g~~~~~~~~~~iRis~~~-~~~~~~l~~~l~~~~~~~~ 361 (364)
T 1lc5_A 302 ----LRCER-------EDIDLQRR-LLTQRILIRSCANYPGLDSRYYRVAIRS-AAQNERLLAALRNVLTGIA 361 (364)
T ss_dssp ----EEESC-------TTCCHHHH-HHTTTEECEECTTSTTCCTTEEEEECCC-HHHHHHHHHHHHHHC----
T ss_pred ----EECCC-------cHHHHHHH-HHHCCcEEeeCcccCCCCCCEEEEEeCC-HHHHHHHHHHHHHHhhccc
Confidence 54431 12234444 4567999999999864 5899999885 5566777777777776654
No 63
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=99.88 E-value=1.2e-22 Score=177.80 Aligned_cols=187 Identities=17% Similarity=0.148 Sum_probs=135.3
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCC-cccccccc-CCccCEEEEccCccccCCCCceEEEEEecC-CCccccccchhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNT-HFVPMGVF-GSIVPVLTLGSISKRWIVPGWRLGWLVTSD-PNGILQDLGVAF 78 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~-~~~~~~~~-~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~-~~~~~~~~~~~~ 78 (233)
+|+++|++||+++|+||+|.++.+++. ...++..+ +..+++|+++|+||.|+++|+|+||+++.. ...+++ .+.
T Consensus 219 ~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~~~~~~~~~~--~~~- 295 (420)
T 4f4e_A 219 QVVEVVKARRLVPFLDIAYQGFGESIEADAAAVRLFAAANLNVFVSSSFSKSFSLYGERVGALSIITDSKDEAA--RVL- 295 (420)
T ss_dssp HHHHHHHHHTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTTCGGGCEEEEEEECSSHHHHH--HHH-
T ss_pred HHHHHHHHCCcEEEEccccccccCCcchhhHHHHHHHhcCCCEEEEEeCCccCcCcCCCcEEEEEEcCCHHHHH--HHH-
Confidence 689999999999999999999998753 23344433 346789999999999999999999987532 112222 112
Q ss_pred hhhhhhHHhhhhhhh-hccCcchHH-HHHHHHhhhc-----HHHHHHHHHHHHHHHHHHHHHHhhcC---CCcccccCCC
Q 047983 79 FHSISLNMRMDDYLL-LSESVYTTV-GAVPQILEKT-----EEEFFSKITDILREAADICCDRLKEI---PCITCPKKPE 148 (233)
Q Consensus 79 ~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~l~~~-----~~~~~~~~~~~~~~~~~~l~~~L~~~---~~~~~~~~~~ 148 (233)
..+..... ...+++... .+++.++... .+++++++++.++++++.+.+.|+++ +++.. ..|+
T Consensus 296 -------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~~~~ 367 (420)
T 4f4e_A 296 -------SQLKRVIRTNYSNPPTHGGAIVAAVLASPELRASWVQELGEMRDRIRAMRNGLVERLKAAGIERDFSF-INAQ 367 (420)
T ss_dssp -------HHHHHHHHTTTSSCCSHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCTH-HHHS
T ss_pred -------HHHHHHHhcccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcee-ECCC
Confidence 22322211 122233333 4444444433 25788999999999999999999886 35553 6788
Q ss_pred ccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec-CHHHHHHHHHHHHHHH
Q 047983 149 GSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV-EPSAFEIGLGRMKAFY 226 (233)
Q Consensus 149 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~-~~~~l~~~~~~l~~~l 226 (233)
+|+|+| +++ +.+.+.++++++||.+.|+. |+|++. +++++++++++|.+++
T Consensus 368 ~g~~~~-----------~~~--------~~~~~~~~l~~~gI~v~~~~--------Ris~~~~~~~~i~~~~~~l~~~l 419 (420)
T 4f4e_A 368 RGMFSY-----------SGL--------TSAQVDRLREEFGIYAVSTG--------RICVAALNTRNLDVVANAIAAVL 419 (420)
T ss_dssp CSSEEE-----------CCC--------CHHHHHHHHHHHCEECCTTS--------EEEGGGCCTTTHHHHHHHHHHHH
T ss_pred ccEEEE-----------eCC--------CHHHHHHHHHhCCEEecCCC--------eEEEecCCHHHHHHHHHHHHHHh
Confidence 999999 443 34567888889999999852 999997 7778999999998876
No 64
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=99.88 E-value=1.1e-22 Score=176.19 Aligned_cols=186 Identities=14% Similarity=0.059 Sum_probs=134.4
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCC-cccccccc-CCccCEEEEccCccccCCCCceEEEEEecCC-Cccccccchhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNT-HFVPMGVF-GSIVPVLTLGSISKRWIVPGWRLGWLVTSDP-NGILQDLGVAF 78 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~-~~~~~~~~-~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~-~~~~~~~~~~~ 78 (233)
+|+++|++||++||+||+|.++.+++. ...++..+ +..+++++++|+||.|+++|+|+||++++.. ..+++ .+.
T Consensus 197 ~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~riG~~~~~~~~~~~~~--~~~- 273 (397)
T 3fsl_A 197 AVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPALVSNSFSKIFSLYGERVGGLSVMCEDAEAAG--RVL- 273 (397)
T ss_dssp HHHHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTTCGGGCCEEEEEECSSHHHHH--HHH-
T ss_pred HHHHHHHhCCEEEEEecCchhhccCcccccHHHHHHHhcCCCEEEEecccccccCcCCCeeEEEEecCCHHHHH--HHH-
Confidence 789999999999999999999998742 33344433 4568899999999999999999999986431 12221 111
Q ss_pred hhhhhhHHhhhhhhh-hccCcchHH-HHHHHHhhhc-----HHHHHHHHHHHHHHHHHHHHHHhhcCC---CcccccCCC
Q 047983 79 FHSISLNMRMDDYLL-LSESVYTTV-GAVPQILEKT-----EEEFFSKITDILREAADICCDRLKEIP---CITCPKKPE 148 (233)
Q Consensus 79 ~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~l~~~-----~~~~~~~~~~~~~~~~~~l~~~L~~~~---~~~~~~~~~ 148 (233)
........ ...+++... .+.+.++... ..++++++++.++++++.+.+.|++++ ++.. ..|+
T Consensus 274 -------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~~~~ 345 (397)
T 3fsl_A 274 -------GQLKATVRRNYSSPPNFGAQVVAAVLNDEALKASWLKEVEEMRTRILAMRQELVKVLSTEMPERNFDY-LLNQ 345 (397)
T ss_dssp -------HHHHHHHHTTTSSCCSHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCCTH-HHHC
T ss_pred -------HHHHHHHHhccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcee-ecCC
Confidence 22222211 112223333 4444444432 257889999999999999999998853 4553 6788
Q ss_pred ccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec-CHHHHHHHHHHHHHH
Q 047983 149 GSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV-EPSAFEIGLGRMKAF 225 (233)
Q Consensus 149 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~-~~~~l~~~~~~l~~~ 225 (233)
+|+|+| ++. +.+.+.++++++||.+.||+ |++++. +++++++++++|.++
T Consensus 346 ~~~~~~-----------~~~--------~~~~~~~~l~~~gi~v~~g~--------Ris~~~~~~~~i~~~~~~l~~~ 396 (397)
T 3fsl_A 346 RGMFSY-----------TGL--------SAAQVDRLREEFGVYLIASG--------RMCVAGLNTANVQRVAKAFAAV 396 (397)
T ss_dssp CSSEEE-----------CCC--------CHHHHHHHHHTTCEECCTTC--------EEEGGGCCTTTHHHHHHHHHHH
T ss_pred ceEEEe-----------cCC--------CHHHHHHHHHhCCEEECCCC--------eEEEEecCHhhHHHHHHHHHhh
Confidence 999999 433 34557888889999999975 999997 778899999999865
No 65
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=99.88 E-value=1.3e-22 Score=176.85 Aligned_cols=186 Identities=13% Similarity=0.080 Sum_probs=132.5
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCC--cccccccc-CCccCEEEEccCccccCCCCceEEEE--EecCCCccccccch
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNT--HFVPMGVF-GSIVPVLTLGSISKRWIVPGWRLGWL--VTSDPNGILQDLGV 76 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~--~~~~~~~~-~~~~~~i~~~s~sK~~~~~G~R~G~~--~~~~~~~~~~~~~~ 76 (233)
+|+++|++||++||+||+|.++.+++. ...++..+ +..+++|+++|+||.|+++|+|+||+ ++++. ++.+ .+
T Consensus 207 ~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~riG~~~~v~~~~-~~~~--~l 283 (409)
T 4eu1_A 207 QVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRHLVDMVPNLIVAQSFSKNFGLYGHRCGALHISTASA-EEAK--RL 283 (409)
T ss_dssp HHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHTTSSCCEEEEECTTTSSCGGGCCEEEEEECSSH-HHHH--HH
T ss_pred HHHHHHHhCCcEEEEeccccccccCCcccchHHHHHHHhhCCcEEEEecCcccccCccCCceEEEEEeCCH-HHHH--HH
Confidence 689999999999999999999998762 12233332 45578899999999999999999997 66552 2221 13
Q ss_pred hhhhhhhhHHhhhhhh-hhccCcchHH-HHHHHHhhhc-----HHHHHHHHHHHHHHHHHHHHHHhhcCCC---cccccC
Q 047983 77 AFFHSISLNMRMDDYL-LLSESVYTTV-GAVPQILEKT-----EEEFFSKITDILREAADICCDRLKEIPC---ITCPKK 146 (233)
Q Consensus 77 ~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~l~~~-----~~~~~~~~~~~~~~~~~~l~~~L~~~~~---~~~~~~ 146 (233)
+ ..+.... ....+++... .+.+..++.. +.+++++.++.++++++.+.+.|++++. +.. ..
T Consensus 284 ~--------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-~~ 354 (409)
T 4eu1_A 284 V--------SQLALLIRPMYNNPPLYGAWVVSSILKDPQLTALWKKELKQMSSRIAEVRKRLVSELKACGSVHDWSH-IE 354 (409)
T ss_dssp H--------HHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHH-HH
T ss_pred H--------HHHHHHHhhhcCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcce-ec
Confidence 3 3333221 1122233333 4444445433 2456888999999999999999988632 443 57
Q ss_pred CCccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec-CHHHHHHHHHHHHHH
Q 047983 147 PEGSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV-EPSAFEIGLGRMKAF 225 (233)
Q Consensus 147 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~-~~~~l~~~~~~l~~~ 225 (233)
|++|+|+| ++. +.+++.++++++||.+.||. |++++. ++++++++++.|.++
T Consensus 355 ~~~~~~~~-----------~~~--------~~~~~~~ll~~~gv~v~p~~--------Ri~~~~~~~~~i~~~~~~l~~~ 407 (409)
T 4eu1_A 355 RQVGMMAY-----------TGL--------TREQVELLRSEYHIYMTLNG--------RAAVSGLNSTNVEYVSQAIHNV 407 (409)
T ss_dssp HSCSSEEE-----------CCC--------CHHHHHHHHHHHCEECCTTC--------EEEGGGCCTTTHHHHHHHHHHH
T ss_pred CCceEEEE-----------eCC--------CHHHHHHHHHcCCEEEcCCC--------EEEEEecCHhhHHHHHHHHHHH
Confidence 89999999 443 34567888888999999963 899986 677799999999876
Q ss_pred H
Q 047983 226 Y 226 (233)
Q Consensus 226 l 226 (233)
+
T Consensus 408 l 408 (409)
T 4eu1_A 408 T 408 (409)
T ss_dssp H
T ss_pred h
Confidence 5
No 66
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=99.88 E-value=1.8e-21 Score=166.33 Aligned_cols=185 Identities=14% Similarity=0.174 Sum_probs=128.0
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEE-ecCCCccccccchhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLV-TSDPNGILQDLGVAFFH 80 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~-~~~~~~~~~~~~~~~~~ 80 (233)
+|+++|++||+++|+||+|.++.++ .........+..++++++.|+||.++++|+|+||++ +++ ++.
T Consensus 168 ~i~~~~~~~~~~li~De~~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~~~~~~--~~~--------- 235 (361)
T 3ftb_A 168 HVLKLAEEKKKTIIIDEAFIEFTGD-PSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNNK--EIA--------- 235 (361)
T ss_dssp HHHHHHHHHTCEEEEECSSGGGTCC-TTSSSGGGTTTCSSEEEEEESSSTTSCGGGCCEEEEESCH--HHH---------
T ss_pred HHHHHhhhcCCEEEEECcchhhcCC-cccchhHhcccCCCEEEEeeChhhcCCCCcceeEEEeCCH--HHH---------
Confidence 6888999999999999999999887 333334444556889999999999999999999998 554 233
Q ss_pred hhhhHHhhhhhhhhccCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcc-cccCCCccEEEEEecC
Q 047983 81 SISLNMRMDDYLLLSESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCIT-CPKKPEGSMFVMYCGS 158 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~~~g~~~~~~~~ 158 (233)
..+..... ..++++.. .+....++ ..+++++.++.++++++.+.+.|++++++. . .++. |.|+|
T Consensus 236 -----~~~~~~~~-~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~~~-~~~~~---- 301 (361)
T 3ftb_A 236 -----AKIKAKQN-PWNINCFAEMAAINCLK--DTNYIEESLLWIKKERKRFIEELNKIGFIKRV-FSPH-ANFVL---- 301 (361)
T ss_dssp -----HHHHTTSC-TTCSCHHHHHHHHHTSS--CHHHHHHHHHHHHHHHHHHHHHHHHSSSEEEE-ECCS-SSEEE----
T ss_pred -----HHHHhhCC-CCCCCHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHHHHhCCCCcee-cCCC-CeEEE----
Confidence 33332211 11233333 44444444 257889999999999999999999887775 3 4454 55677
Q ss_pred CCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC--CCcEEEEeecCHHHHHHHHHHHHHH
Q 047983 159 EDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL--KDWLRITFAVEPSAFEIGLGRMKAF 225 (233)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~~Rl~~~~~~~~l~~~~~~l~~~ 225 (233)
++++. . +..++... |.++||.+.||+.|+. .+++|++++. .+++++..+.|.++
T Consensus 302 -----~~~~~-----~-~~~~l~~~-l~~~gi~v~~g~~~~~~~~~~iRis~~~-~~~~~~l~~~l~~~ 357 (361)
T 3ftb_A 302 -----CRLEN-----I-SGEKLYDS-LLKEDIVIRRCCNFIGLDDSFVRFAIKD-EKKNTKFLRALKGV 357 (361)
T ss_dssp -----EEESS-----S-CHHHHHHH-HHTTTEECEECTTSTTCCTTEEEEECCC-HHHHHHHHHHHHHH
T ss_pred -----EEcCC-----C-CHHHHHHH-HHHCCeEEeeCccCCCCCCCEEEEEcCC-HHHHHHHHHHHHHH
Confidence 44432 1 24455555 4556999999999975 6899999985 33334444444433
No 67
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=99.88 E-value=3e-22 Score=174.44 Aligned_cols=187 Identities=16% Similarity=0.134 Sum_probs=136.5
Q ss_pred hHHHHHHHcCcEEEEccccCccccCC--CccccccccC-CccCEEEEccCccccCCCCceEEEEEe---cCCCccccccc
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGN--THFVPMGVFG-SIVPVLTLGSISKRWIVPGWRLGWLVT---SDPNGILQDLG 75 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~--~~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~R~G~~~~---~~~~~~~~~~~ 75 (233)
+|+++|++||++||+||+|.++.+++ ..+.++..+. ..+++|++.|+||.|+++|+|+||+++ ++ ++++ .
T Consensus 207 ~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~--~~~~--~ 282 (412)
T 1ajs_A 207 QIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVSEGFELFCAQSFSKNFGLYNERVGNLTVVAKEP--DSIL--R 282 (412)
T ss_dssp HHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGGCEEEEEEECSSH--HHHH--H
T ss_pred HHHHHHHHCCCEEEEEcccccccCCcccccchHHHHHhccCCcEEEEEecccccCCCCcceEEEEEecCCH--HHHH--H
Confidence 68999999999999999999998875 2333444332 357899999999999999999999999 44 3222 1
Q ss_pred hhhhhhhhhHHhhhhhhhh-ccCcchHH-HHHHHHhhhcH-----HHHHHHHHHHHHHHHHHHHHHhhcCC---Cccccc
Q 047983 76 VAFFHSISLNMRMDDYLLL-SESVYTTV-GAVPQILEKTE-----EEFFSKITDILREAADICCDRLKEIP---CITCPK 145 (233)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~l~~~~-----~~~~~~~~~~~~~~~~~l~~~L~~~~---~~~~~~ 145 (233)
++ ..+...... ..++++.. .+....++... ++++++.++.++++++.+.+.|++++ ++.. .
T Consensus 283 ~~--------~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~ 353 (412)
T 1ajs_A 283 VL--------SQMQKIVRVTWSNPPAQGARIVARTLSDPELFHEWTGNVKTMADRILSMRSELRARLEALKTPGTWNH-I 353 (412)
T ss_dssp HH--------HHHHHHHHTTTSSCCSHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCHH-H
T ss_pred HH--------HHHHHHHhcccCCCChHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCeeE-E
Confidence 22 333321111 11123333 44444454332 46889999999999999999998874 3553 5
Q ss_pred CCCccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec-CHHHHHHHHHHHHH
Q 047983 146 KPEGSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV-EPSAFEIGLGRMKA 224 (233)
Q Consensus 146 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~-~~~~l~~~~~~l~~ 224 (233)
.|.+|+|+| +.+ +.+++..+++++||.+.|+ +|++++. +++++++++++|.+
T Consensus 354 ~~~~~~~~~-----------~~~--------~~~~~~~~l~~~gv~v~~~--------~Ris~~~~~~~~i~~~~~~l~~ 406 (412)
T 1ajs_A 354 TDQIGMFSF-----------TGL--------NPKQVEYLINQKHIYLLPS--------GRINMCGLTTKNLDYVATSIHE 406 (412)
T ss_dssp HHCCSSEEE-----------CCC--------CHHHHHHHHHTTCEECCTT--------SEEEGGGCCTTTHHHHHHHHHH
T ss_pred cCCCceEEE-----------eCC--------CHHHHHHHHHhCCEEecCC--------cEEEeeeCCHHHHHHHHHHHHH
Confidence 788999999 432 2567778888999999984 5999995 88899999999999
Q ss_pred HHHH
Q 047983 225 FYYR 228 (233)
Q Consensus 225 ~l~~ 228 (233)
++++
T Consensus 407 ~l~~ 410 (412)
T 1ajs_A 407 AVTK 410 (412)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8865
No 68
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=99.88 E-value=2.1e-22 Score=178.09 Aligned_cols=191 Identities=15% Similarity=0.102 Sum_probs=137.9
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCC--cccccccc-CCccCEEEEccCccccCCCCceEEEE--Ee--------cCCC
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNT--HFVPMGVF-GSIVPVLTLGSISKRWIVPGWRLGWL--VT--------SDPN 68 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~--~~~~~~~~-~~~~~~i~~~s~sK~~~~~G~R~G~~--~~--------~~~~ 68 (233)
+|+++|++||+++|+||+|+++.+++. ...++..+ +..+++|++.|+||.|+++|+|+||+ ++ ++.
T Consensus 226 ~i~~l~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~v~~~~~~~~~~~~- 304 (448)
T 3meb_A 226 ELLPIMKEKKHIAFFDSAYQGFATGSFEADAFAVRMFVDAGVEVLVAQSFSKNFGLYGERIGCLHVVHAGVEGSVEKNK- 304 (448)
T ss_dssp HHHHHHHHHTCEEEEEESCTTTSSSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGGCCEEEEEECCCCSSSHHHHH-
T ss_pred HHHHHHHHCCCEEEEecccccccCCCcccCchhHHHHhhcCCcEEEEecccccCCCccccceeeeeeeccccccccCCH-
Confidence 589999999999999999999988762 22233322 34578999999999999999999998 66 431
Q ss_pred ccccccchhhhhhhhhHHhhhhhhh-hccCcchHH-HHHHHHhhhc-----HHHHHHHHHHHHHHHHHHHHHHhhcC--C
Q 047983 69 GILQDLGVAFFHSISLNMRMDDYLL-LSESVYTTV-GAVPQILEKT-----EEEFFSKITDILREAADICCDRLKEI--P 139 (233)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~l~~~-----~~~~~~~~~~~~~~~~~~l~~~L~~~--~ 139 (233)
...+ .++ ..+..... ...+++... .+++..+... +.+++++++++++++++.+.+.|+++ +
T Consensus 305 ~~~~--~l~--------~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~ 374 (448)
T 3meb_A 305 ALSA--AMV--------SGMTLQIRKTWSMSAIHGAYIVQVIVHDKRLLQMFYDNVKEMSARIHRMRSLLHASLAKRKTP 374 (448)
T ss_dssp HHHH--HHH--------HHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHH--HHH--------HHHHHHHhcccCCccHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 1211 122 22222211 122333333 4455555432 12568899999999999999999886 4
Q ss_pred C------cccccCCCccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec-CH
Q 047983 140 C------ITCPKKPEGSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV-EP 212 (233)
Q Consensus 140 ~------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~-~~ 212 (233)
+ +.. ..|++|+|+| +++ +.+++.++++++||.+.||+. |+|++. ++
T Consensus 375 ~~~~~~~~~~-~~~~~g~~~~-----------~~~--------~~~~~~~ll~~~gV~v~~G~g-------Ris~a~~~~ 427 (448)
T 3meb_A 375 GPGSKGTWDH-ILTAIGMFTF-----------TGL--------TPEHVDYLKEKWSIYLVKAGG-------RMSMCGLTE 427 (448)
T ss_dssp CSTTTCCCTH-HHHCCSSEEE-----------CCC--------CHHHHHHHHHHHCEEECSGGG-------EEEGGGCCT
T ss_pred CcCcccccce-eCCCceEEEe-----------cCC--------CHHHHHHHHHhCCEEEeCCCc-------EEEEecCCH
Confidence 4 543 5789999999 543 357788888899999999862 999997 88
Q ss_pred HHHHHHHHHHHHHHHHHh
Q 047983 213 SAFEIGLGRMKAFYYRHA 230 (233)
Q Consensus 213 ~~l~~~~~~l~~~l~~~~ 230 (233)
+++++++++|.+++++..
T Consensus 428 ~~i~~~~~~l~~~l~~~~ 445 (448)
T 3meb_A 428 SNCDYVAEAIHDAVTKLP 445 (448)
T ss_dssp TTHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHhcc
Confidence 889999999999997543
No 69
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=99.88 E-value=1.3e-21 Score=166.98 Aligned_cols=186 Identities=17% Similarity=0.251 Sum_probs=133.2
Q ss_pred hHHHHHHH--cCcEEEEccccCccccCCCccccccccCCc-cCEEEEccCccccCCCCceEEEEEecCCCccccccchhh
Q 047983 2 CIEETTKK--LGIMVIADEVYGHLVFGNTHFVPMGVFGSI-VPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAF 78 (233)
Q Consensus 2 ~i~~l~~~--~~~~lI~De~y~~~~~~~~~~~~~~~~~~~-~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~ 78 (233)
+|.++|+. ||+++|+||+|.++.+++.....+...+.. ++++++.|+||.|+++|+|+||+++++ +++
T Consensus 162 ~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~--~~~------- 232 (354)
T 3ly1_A 162 VIEPWIASKPANTMFIVDEAYAEFVNDPRFRSISPMITQGAENIILLKTFSKIHAMAGMRVGYAVAHP--TVI------- 232 (354)
T ss_dssp HHHHHHHTCCTTEEEEEECTTGGGCCCTTCCCSHHHHHTTCSSEEEEEESSSTTCCGGGCCEEEECCH--HHH-------
T ss_pred HHHHHHHhCCCCeEEEEeccHHHhccccccCCHHHHhhhcCCCEEEEeeChhhccChhhhheeeecCH--HHH-------
Confidence 34455554 999999999999998876544444444555 889999999999999999999999976 333
Q ss_pred hhhhhhHHhhhhhhhhccCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEec
Q 047983 79 FHSISLNMRMDDYLLLSESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCG 157 (233)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~ 157 (233)
..+...... .++++.. .++...++. .+++++.++.++++++.+.+.|+++ ++.. . |..|.|+|
T Consensus 233 -------~~~~~~~~~-~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~-~-~~~~~~~~--- 296 (354)
T 3ly1_A 233 -------ALMGRYVAG-EKINFSGVDAALASMND--SAFITYSKKSNDVSRQILLKALEDL-KLPY-L-PSEGNFVF--- 296 (354)
T ss_dssp -------HHHGGGTTC-SCCCHHHHHHHHHHTTC--HHHHHHHHHHHHHHHHHHHHHHHHH-TCCB-C-CCCSSEEE---
T ss_pred -------HHHHHhcCC-CCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCeE-C-CCCceEEE---
Confidence 333332221 2233333 444444432 3788999999999999999999887 5543 3 44567789
Q ss_pred CCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeecCHHHHHHHHHHHHHHHHH
Q 047983 158 SEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAVEPSAFEIGLGRMKAFYYR 228 (233)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~~~~~l~~~~~~l~~~l~~ 228 (233)
+.++ . +..++ .+.|.++||.+. |+.++..+++|++++ ++++++++++.|.+++++
T Consensus 297 ------~~~~--~-----~~~~~-~~~l~~~gi~v~-g~~~~~~~~iRis~~-~~~~i~~~~~~l~~~l~~ 351 (354)
T 3ly1_A 297 ------HQLV--V-----PLKDY-QTHMADAGVLIG-RAFPPADNWCRISLG-TPQEMQWVADTMREFRKK 351 (354)
T ss_dssp ------EECS--S-----CHHHH-HHHHHHTTEECC-CCCTTCTTEEEEECC-CHHHHHHHHHHHHHHHHT
T ss_pred ------EECC--C-----CHHHH-HHHHHHCCEEEe-ecCCCCCCEEEEEcC-CHHHHHHHHHHHHHHHHh
Confidence 5443 1 24444 445557899998 776666899999988 677899999999988864
No 70
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=99.87 E-value=2.8e-22 Score=174.04 Aligned_cols=187 Identities=16% Similarity=0.071 Sum_probs=132.1
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCc--ccccccc-CCccCEEEEccCccccCCCCceEEEEEecCCC-ccccccchh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTH--FVPMGVF-GSIVPVLTLGSISKRWIVPGWRLGWLVTSDPN-GILQDLGVA 77 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~--~~~~~~~-~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~-~~~~~~~~~ 77 (233)
+|+++|++||+++|+||+|.++.+++.. ..++..+ +..+++|+++|+||.|+++|+|+||++++..+ ...+ .+.
T Consensus 199 ~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~RiG~l~~~~~~~~~~~--~~~ 276 (401)
T 7aat_A 199 ELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGIDVVLSQSYAKNMGLYGERAGAFTVICRDAEEAK--RVE 276 (401)
T ss_dssp HHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTSCCGGGCEEEEEEECSSHHHHH--HHH
T ss_pred HHHHHHHhCCcEEEEccccccccCCCccccHHHHHHHHhcCCcEEEEecCCcccccccCceEEEEEEeCCHHHHH--HHH
Confidence 6899999999999999999999887531 2233322 45678999999999999999999999874311 1111 122
Q ss_pred hhhhhhhHHhhhhhhh-hccCcchHH-HHHHHHhhhc-----HHHHHHHHHHHHHHHHHHHHHHhhcCC---CcccccCC
Q 047983 78 FFHSISLNMRMDDYLL-LSESVYTTV-GAVPQILEKT-----EEEFFSKITDILREAADICCDRLKEIP---CITCPKKP 147 (233)
Q Consensus 78 ~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~l~~~-----~~~~~~~~~~~~~~~~~~l~~~L~~~~---~~~~~~~~ 147 (233)
..+..... ...+++... .+.+.++.+. +.+++++.++.++++++.+.+.|++++ ++.. ..|
T Consensus 277 --------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~-~~~ 347 (401)
T 7aat_A 277 --------SQLKILIRPMYSNPPMNGARIASLILNTPELRKEWLVEVKGMADRIISMRTQLVSNLKKEGSSHNWQH-ITD 347 (401)
T ss_dssp --------HHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHH-HHH
T ss_pred --------HHHHHHHHhccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCce-ecC
Confidence 22222111 222333333 3444444332 156788999999999999999998863 3443 578
Q ss_pred CccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec-CHHHHHHHHHHHHHHH
Q 047983 148 EGSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV-EPSAFEIGLGRMKAFY 226 (233)
Q Consensus 148 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~-~~~~l~~~~~~l~~~l 226 (233)
++++|+| ++. +.+.+.++++++||.+.|+ +|++++. ++++++++++.|.+++
T Consensus 348 ~~~~~~~-----------~~~--------~~~~~~~ll~~~gi~v~~~--------~Ris~~~~~~~~i~~~~~~l~~~~ 400 (401)
T 7aat_A 348 QIGMFCF-----------TGL--------KPEQVERLTKEFSIYMTKD--------GRISVAGVASSNVGYLAHAIHQVT 400 (401)
T ss_dssp CCSSEEE-----------CCC--------CHHHHHHHHHHHCEECCTT--------CEEEGGGCCTTTHHHHHHHHHHHH
T ss_pred CcceEEe-----------cCC--------CHHHHHHHHHhCCEeccCC--------CeEEeccCChhhHHHHHHHHHHHh
Confidence 9999999 443 3556678888999999875 5999985 6666999999998765
No 71
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=99.87 E-value=3.6e-22 Score=174.06 Aligned_cols=188 Identities=13% Similarity=0.107 Sum_probs=133.8
Q ss_pred hHHHHHHHcCcEEEEccccCccccCC--CccccccccC-Ccc---CEEEEccCccccCCCCceEEEEE--e-----cCCC
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGN--THFVPMGVFG-SIV---PVLTLGSISKRWIVPGWRLGWLV--T-----SDPN 68 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~--~~~~~~~~~~-~~~---~~i~~~s~sK~~~~~G~R~G~~~--~-----~~~~ 68 (233)
+|+++|++||++||+||+|.++.+++ ....++..+. ..+ ++|+++|+||.|+.+|+|+||++ + ++
T Consensus 200 ~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~GlriG~~~~~~~~~~~~~-- 277 (412)
T 1yaa_A 200 QIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKLSTVSPVFVCQSFAKNAGMYGERVGCFHLALTKQAQNK-- 277 (412)
T ss_dssp HHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHTTTTCCEEEEEECTTTSCCGGGCEEEEEEECCSCTTHH--
T ss_pred HHHHHHHHCCCEEEEecccccccCCcccchhHHHHHHHhcCCCCcceEEEeccCCCCCCcCCcceEEEEEecCCCCCH--
Confidence 68999999999999999999998875 1222343322 223 89999999999998999999998 6 33
Q ss_pred ccccccchhhhhhhhhHHhhhhhhh-hccCcchHH-HHHHHHhhhc-----HHHHHHHHHHHHHHHHHHHHHHhhcCC--
Q 047983 69 GILQDLGVAFFHSISLNMRMDDYLL-LSESVYTTV-GAVPQILEKT-----EEEFFSKITDILREAADICCDRLKEIP-- 139 (233)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~l~~~-----~~~~~~~~~~~~~~~~~~l~~~L~~~~-- 139 (233)
...+ .++ ..+..... ...+++... .++...++.. .+++++++++.++++++.+.+.|++++
T Consensus 278 ~~~~--~l~--------~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 347 (412)
T 1yaa_A 278 TIKP--AVT--------SQLAKIIRSEVSNPPAYGAKIVAKLLETPELTEQWHKDMVTMSSRITKMRHALRDHLVKLGTP 347 (412)
T ss_dssp HHHH--HHH--------HHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCS
T ss_pred HHHH--HHH--------HHHHHHHhhccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 2111 122 33332111 112223333 4445555443 246899999999999999999998864
Q ss_pred -CcccccCCCccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec-CHHHHHH
Q 047983 140 -CITCPKKPEGSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV-EPSAFEI 217 (233)
Q Consensus 140 -~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~-~~~~l~~ 217 (233)
++.. ..|++|+|+| ++. +.+.+.++++++||.+.| ++|++++. +++++++
T Consensus 348 ~~~~~-~~~~~~~~~~-----------~~~--------~~~~~~~~l~~~gi~v~~--------~~Ris~~~~~~~~i~~ 399 (412)
T 1yaa_A 348 GNWDH-IVNQCGMFSF-----------TGL--------TPQMVKRLEETHAVYLVA--------SGRASIAGLNQGNVEY 399 (412)
T ss_dssp SCCTH-HHHCCSSEEE-----------CCC--------CHHHHHHHHHHHCEECCT--------TSEEEGGGCCTTTHHH
T ss_pred CCeee-eccCceEEEe-----------eCC--------CHHHHHHHHHhCCEEecc--------CcEEEEccCCHhHHHH
Confidence 3553 6788999999 432 234557788889999987 57999996 8889999
Q ss_pred HHHHHHHHHHHH
Q 047983 218 GLGRMKAFYYRH 229 (233)
Q Consensus 218 ~~~~l~~~l~~~ 229 (233)
++++|.++++.+
T Consensus 400 ~~~~l~~~~~~~ 411 (412)
T 1yaa_A 400 VAKAIDEVVRFY 411 (412)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHhh
Confidence 999999988653
No 72
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=99.87 E-value=5.9e-21 Score=163.72 Aligned_cols=180 Identities=17% Similarity=0.223 Sum_probs=133.9
Q ss_pred hHHHHHHHc--CcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 2 CIEETTKKL--GIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 2 ~i~~l~~~~--~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
+|+++|++| |+++|+||+|.++...+ . ...++..++++++.|+||. +++|+|+||+++++ .++
T Consensus 181 ~i~~~~~~~~~~~~li~De~~~~~~~~~--~--~~~~~~~~~~i~~~s~sK~-~~~G~r~G~~~~~~--~~~-------- 245 (367)
T 3euc_A 181 AIVRAAQGSVCRSLVVVDEAYQPFAQES--W--MSRLTDFGNLLVMRTVSKL-GLAGIRLGYVAGDP--QWL-------- 245 (367)
T ss_dssp HHHHHTBTTSCBCEEEEECTTCCSSSCC--S--GGGGGTCTTEEEEEECCCT-TSCSCCEEEEEECH--HHH--------
T ss_pred HHHHhhhhcCCCcEEEEeCcchhhcccc--h--HHHHhhCCCEEEEecchhh-cccccCceeeeeCH--HHH--------
Confidence 688899999 99999999999976332 2 2234556789999999999 99999999999976 333
Q ss_pred hhhhhHHhhhhhh-hhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecC
Q 047983 80 HSISLNMRMDDYL-LLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGS 158 (233)
Q Consensus 80 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~ 158 (233)
..+.... .++.++..+ .+....++. .+++++.++.++++++.+.+.|++++++. ..|.+|+|+|
T Consensus 246 ------~~~~~~~~~~~~~~~~~-~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~~g~~--~~~~~~~~~~---- 310 (367)
T 3euc_A 246 ------EQLDKVRPPYNVNVLTE-ATALFALEH--VAVLDEQAAQLRAERSRVAEGMAAHGGVT--VFPSAANFLL---- 310 (367)
T ss_dssp ------HHHGGGCCSSCCCHHHH-HHHHHHHTT--HHHHHHHHHHHHHHHHHHHHHHHTSTTCE--ECCCSSSEEE----
T ss_pred ------HHHHHhCCCCCCCHHHH-HHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHhCCCcE--ECCCCCeEEE----
Confidence 3333222 122222222 444444443 67889999999999999999999987775 3466788889
Q ss_pred CCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC--CCcEEEEeecCHHHHHHHHHHHHHHH
Q 047983 159 EDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL--KDWLRITFAVEPSAFEIGLGRMKAFY 226 (233)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~~Rl~~~~~~~~l~~~~~~l~~~l 226 (233)
+.++ +..+ +.+.|.++||.+.||+.|+. .+++|++++ ++++++++++.|.+++
T Consensus 311 -----~~~~--------~~~~-l~~~l~~~gi~v~~~~~~~~~~~~~iRis~~-~~~~i~~~~~~l~~~l 365 (367)
T 3euc_A 311 -----ARVP--------DAAQ-TFDRLLARKVLIKNVSKMHPLLANCLRVTVS-TPEENAQFLEAFAASL 365 (367)
T ss_dssp -----EECS--------CHHH-HHHHHHTTTEECEECGGGCGGGTTEEEEECC-CHHHHHHHHHHHHHHT
T ss_pred -----EECC--------CHHH-HHHHHHHCCeEEEECCccCCCCCCEEEEecC-CHHHHHHHHHHHHHHh
Confidence 5553 1444 44556788999999998864 689999998 7778899999988765
No 73
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=99.86 E-value=3.1e-21 Score=165.36 Aligned_cols=185 Identities=17% Similarity=0.197 Sum_probs=131.2
Q ss_pred hHHHHHH--HcCcEEEEccccCcccc--CCCcccc-ccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccch
Q 047983 2 CIEETTK--KLGIMVIADEVYGHLVF--GNTHFVP-MGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGV 76 (233)
Q Consensus 2 ~i~~l~~--~~~~~lI~De~y~~~~~--~~~~~~~-~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~ 76 (233)
+|.++++ ++|+++|+||+|.++.+ .+..+.+ +...+..+++++++|+||.|+++|+|+||+++++ +++
T Consensus 174 ~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--~~~----- 246 (365)
T 3get_A 174 EATEFIKGVNEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGIANA--NII----- 246 (365)
T ss_dssp HHHHHHHTSCTTSEEEEECTTHHHHHHHCGGGCCCHHHHHHHCTTEEEEEESSSTTSCTTTCCEEEEECH--HHH-----
T ss_pred HHHHHHHhCCCCcEEEEeCccHHHhcccCCcccccHhHHhccCCCEEEEeecchHhcCcchheEEEEcCH--HHH-----
Confidence 3455555 67999999999999886 4433333 3333456789999999999999999999999966 333
Q ss_pred hhhhhhhhHHhhhhhhh-hccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEE
Q 047983 77 AFFHSISLNMRMDDYLL-LSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMY 155 (233)
Q Consensus 77 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~ 155 (233)
..+..... ++.++..+ .++...++ ..+++++.++.++++++.+.+.|+++ ++.. .++ .|.|+|
T Consensus 247 ---------~~~~~~~~~~~~~~~~~-~~~~~~l~--~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~-~~~-~~~~~~- 310 (365)
T 3get_A 247 ---------SAFYKLRAPFNVSNLAL-KAAVAAMD--DDEFTEKTLENNFSQMELYKEFAKKH-NIKI-IDS-YTNFIT- 310 (365)
T ss_dssp ---------HHHHHHSCTTCSCHHHH-HHHHHHHT--CHHHHHHHHHHHHHHHHHHHHHHHHT-TCEE-CCC-SSSEEE-
T ss_pred ---------HHHHHhcCCCCcCHHHH-HHHHHHhC--CHHHHHHHHHHHHHHHHHHHHHHHhC-CCEE-CCC-CCeEEE-
Confidence 33332222 23222332 44444444 24788999999999999999999988 5553 444 456688
Q ss_pred ecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeecCHHHHHHHHHHHHHHH
Q 047983 156 CGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAVEPSAFEIGLGRMKAFY 226 (233)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~~~~~l~~~~~~l~~~l 226 (233)
+.++.. +..++. +.|.++||.+.||+.|+ .+++|++++ ++++++++++.|++++
T Consensus 311 --------~~~~~~------~~~~~~-~~l~~~gi~v~~g~~~~-~~~iRis~~-~~~~i~~l~~~l~~~l 364 (365)
T 3get_A 311 --------YFFDEK------NSTDLS-EKLLKKGIIIRNLKSYG-LNAIRITIG-TSYENEKFFTEFDKIL 364 (365)
T ss_dssp --------EECSSS------CHHHHH-HHHHTTTEECEECGGGT-CSEEEEECC-CHHHHHHHHHHHHHHH
T ss_pred --------EECCCC------CHHHHH-HHHHHCCEEEEECccCC-CCEEEEEcC-CHHHHHHHHHHHHHHh
Confidence 544321 244444 45556799999999998 899999998 6778899999888765
No 74
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=99.86 E-value=1.5e-21 Score=166.49 Aligned_cols=191 Identities=15% Similarity=0.228 Sum_probs=128.7
Q ss_pred hHHHHHHHcC-cEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 2 CIEETTKKLG-IMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 2 ~i~~l~~~~~-~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
+|.++++.++ .+||+||+|.++.+++... ...++..++++++.|+||.++++|+|+||+++++ +++
T Consensus 150 ~l~~l~~~~~~~~li~Dea~~~~~~~~~~~--~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~--~~~--------- 216 (350)
T 3fkd_A 150 EILRLLNDHPDTTFVLDQSYVSFTTEEVIR--PADIKGRKNLVMVYSFSHAYGIPGLRIGYIVANK--DFM--------- 216 (350)
T ss_dssp HHHHHHHHCTTSEEEEECTTTTSCSSCCCC--GGGGTTCSSEEEEEESHHHHSCGGGCCEEEECCH--HHH---------
T ss_pred HHHHHHHhCCCCEEEEECchhhhccCcchh--hHHhhcCCCEEEEecCchhccCcchheEeEEeCH--HHH---------
Confidence 5667777665 6999999999988765432 2445567889999999999999999999999965 333
Q ss_pred hhhhHHhhhhhhh-hccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCC
Q 047983 81 SISLNMRMDDYLL-LSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSE 159 (233)
Q Consensus 81 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~ 159 (233)
..+..... ++.++..+ .+....++.. ..+.+..++.. ++++.+.+.|++++++.. . |.++.|+|
T Consensus 217 -----~~~~~~~~~~~~~~~~~-~~~~~~l~~~-~~~~~~~~~~~-~~~~~l~~~L~~~~~~~~-~-~~~~~~~~----- 281 (350)
T 3fkd_A 217 -----KRVAAFSTPWAVNALAI-EAAKFILIHP-AQFTLPIRKWQ-RNTVDFITALNRLDGVEV-H-PSGTTFFL----- 281 (350)
T ss_dssp -----HHHHTTCCTTCSCHHHH-HHHHHHHHCT-TTTCCCHHHHH-HHHHHHHHHHHHSTTEEE-C-CCSSSEEE-----
T ss_pred -----HHHHHhCCCCCCCHHHH-HHHHHHHhCH-HHHHHHHHHHH-HHHHHHHHHHhcCCCcEE-C-CCCCcEEE-----
Confidence 33333222 22222232 4444444332 22444445555 888999999988877764 3 45567778
Q ss_pred CcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC--CCcEEEEeecCHHHHHHHHHHHHHHHHHHhh
Q 047983 160 DKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL--KDWLRITFAVEPSAFEIGLGRMKAFYYRHAK 231 (233)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~~Rl~~~~~~~~l~~~~~~l~~~l~~~~~ 231 (233)
++++.. +..++..++++++||.+.||+.|+. .+++|++++ .+++.++..+.|+++++++.+
T Consensus 282 ----~~~~~~------~~~~l~~~L~~~~gi~v~~g~~f~~~~~~~iRis~~-~~~~~~~l~~al~~~~~~~~~ 344 (350)
T 3fkd_A 282 ----LRLKKG------TAAELKKYMLEEYNMLIRDASNFRGLDESYVRITTQ-RPAQNQLFIKALETFLEKYEG 344 (350)
T ss_dssp ----EEESSS------CHHHHHHHHHHTTCEECEECTTSTTCCTTEEEEECC-CHHHHHHHHHHHHHHHTC---
T ss_pred ----EECCCC------CHHHHHHHHHHHCCEEEEeCccCCCCCCCEEEEEcC-CHHHHHHHHHHHHHHHHHhcc
Confidence 556531 3566666666558999999999976 689999998 445567777777777766654
No 75
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=99.86 E-value=6.9e-21 Score=163.15 Aligned_cols=187 Identities=16% Similarity=0.215 Sum_probs=131.6
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|.++|+++|+++|+||+|++|. +... +...+..++++++.|+||.|+++|+|+||+++++ +++
T Consensus 169 ~~l~~l~~~~~~~li~De~~~~~~--~~~~--~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~--~~~--------- 233 (360)
T 3hdo_A 169 EYIDELARRCAGMLVLDETYAEFA--ESNA--LELVRRHENVVVTRTLSKSYSLAGMRIGLAIARP--EVI--------- 233 (360)
T ss_dssp HHHHHHHHHBSSEEEEECTTGGGS--SCCC--THHHHHCSSEEEEEESTTTTSCTTSCCEEEECCH--HHH---------
T ss_pred HHHHHHHHHCCCEEEEECChHhhC--Ccch--hHHhccCCCEEEEecchHhhcCCccceeeEeeCH--HHH---------
Confidence 378999999999999999999973 3222 2223445789999999999999999999999976 333
Q ss_pred hhhhHHhhhhhhh-hccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCC
Q 047983 81 SISLNMRMDDYLL-LSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSE 159 (233)
Q Consensus 81 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~ 159 (233)
..+..... ++.++..+ .+....++. .+++++.++.++++++.+.+.|+++ ++.. . +.+|.|+|
T Consensus 234 -----~~~~~~~~~~~~~~~~~-~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~-~-~~~~~~~~----- 297 (360)
T 3hdo_A 234 -----AALDKIRDHYNLDRLAQ-AACVAALRD--QAYLSECCRRIRETREWFTTELRSI-GYDV-I-PSQGNYLF----- 297 (360)
T ss_dssp -----HHHHHHSCSCCSCHHHH-HHHHHHHHC--HHHHHHHHHHHHHHHHHHHHHHHHT-TCEE-C-CCSSSEEE-----
T ss_pred -----HHHHHhCCCCCCCHHHH-HHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCEE-c-CCCccEEE-----
Confidence 33333222 23222333 444444432 5678999999999999999999887 5553 3 44667788
Q ss_pred CcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeecCHHHHHHHHHHHHHHHHHHh
Q 047983 160 DKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAVEPSAFEIGLGRMKAFYYRHA 230 (233)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~~~~~l~~~~~~l~~~l~~~~ 230 (233)
+.++ +. +.+.+.+.|.++||.+.|++..+..+++|++++ ++++++..++.|+++-+.+.
T Consensus 298 ----~~~~-----~~--~~~~l~~~l~~~gi~v~~~~~~~~~~~iRis~~-~~~e~~~l~~al~~~~~~~~ 356 (360)
T 3hdo_A 298 ----ATPP-----DR--DGKRVYDGLYARKVLVRHFSDPLLAHGMRISIG-TREEMEQTLAALKEIGEGHH 356 (360)
T ss_dssp ----EECT-----TC--CHHHHHHHHHHTTEECBCCCSTTTTTSEEEECC-CHHHHHHHHHHHHHHHC---
T ss_pred ----EECC-----CC--CHHHHHHHHHHCCEEEEECCCCCCCCEEEEEcC-CHHHHHHHHHHHHHHhcccc
Confidence 4443 11 344455566788999999887555799999998 66677888888877765543
No 76
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=99.86 E-value=4.1e-22 Score=172.51 Aligned_cols=185 Identities=15% Similarity=0.145 Sum_probs=130.7
Q ss_pred hHHHHHHHcCcEEEEccccCccccCC-CccccccccCC-ccCEEEEccCccccCCCCceEEEEEe--cCCCccccccchh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGN-THFVPMGVFGS-IVPVLTLGSISKRWIVPGWRLGWLVT--SDPNGILQDLGVA 77 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~-~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~R~G~~~~--~~~~~~~~~~~~~ 77 (233)
+|+++|++||++||+||+|.++.+++ ....++..++. .++++++.|+||.|+++|+|+||+++ +++ +.++ .+.
T Consensus 196 ~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~-~~~~--~~~ 272 (396)
T 2q7w_A 196 TLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSXNFGLYNERVGACTLVAADS-ETVD--RAF 272 (396)
T ss_dssp HHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEEEEECTTTTTCGGGCCEEEEEECSSH-HHHH--HHH
T ss_pred HHHHHHHHCCCEEEEecccccccCCccchhHHHHHHHhcCCcEEEEEeccccccccccccceEEEEcCCH-HHHH--HHH
Confidence 68999999999999999999998764 12233443332 36899999999999999999999997 331 2222 122
Q ss_pred hhhhhhhHHhhhhhhh-hccCcchHH-HHHHHHhhhc-----HHHHHHHHHHHHHHHHHHHHHHhhcCC---CcccccCC
Q 047983 78 FFHSISLNMRMDDYLL-LSESVYTTV-GAVPQILEKT-----EEEFFSKITDILREAADICCDRLKEIP---CITCPKKP 147 (233)
Q Consensus 78 ~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~l~~~-----~~~~~~~~~~~~~~~~~~l~~~L~~~~---~~~~~~~~ 147 (233)
..+..... ....+++.. .+....++.. ..+++++.++.++++++.+.+.|++++ ++.. ..|
T Consensus 273 --------~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~~~ 343 (396)
T 2q7w_A 273 --------SQMKAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSF-IIK 343 (396)
T ss_dssp --------HHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHTTCCSCCTH-HHH
T ss_pred --------HHHHHHHhhccCCCCcHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcce-ecC
Confidence 22222111 111223333 4444444432 246888999999999999999998874 3553 578
Q ss_pred CccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec-CHHHHHHHHHHHHHH
Q 047983 148 EGSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV-EPSAFEIGLGRMKAF 225 (233)
Q Consensus 148 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~-~~~~l~~~~~~l~~~ 225 (233)
++|+|+| +.. +.+.+.++++++||.+.|| +|++++. +++++++++++|.++
T Consensus 344 ~~~~~~~-----------~~~--------~~~~~~~~l~~~gv~v~~~--------~Ris~~~~~~e~i~~~~~~l~~~ 395 (396)
T 2q7w_A 344 QNGMFSF-----------SGL--------TKEQVLRLREEFGVYAVAS--------GRVNVAGMTPDNMAPLCEAIVAV 395 (396)
T ss_dssp CCSSEEE-----------CCC--------CHHHHHHHHHHHCEECCTT--------CEEEGGGCCTTTHHHHHHHHHHH
T ss_pred CCceEEE-----------ecC--------CHHHHHHHHHhcCeeecCC--------ceEEEeecCHHHHHHHHHHHHhc
Confidence 8999999 433 2356778888899999984 6999996 888999999999875
No 77
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=99.86 E-value=1.5e-20 Score=159.10 Aligned_cols=179 Identities=16% Similarity=0.177 Sum_probs=123.5
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|.++|+++++ +|+||+|.+|...+.. . ....+++++++|+||.|+++|+|+||+++++ +++
T Consensus 155 ~~l~~l~~~~~~-~ivDea~~~~~~~~~~--~---~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~--~~~--------- 217 (337)
T 3p1t_A 155 GELDQLRQRAGK-LLIDETYVDYSSFRAR--G---LAYGENELVFRSFSKSYGLAGLRLGALFGPS--ELI--------- 217 (337)
T ss_dssp HHHHHHHHHCSE-EEEECTTGGGSSCSSS--C---CCCBTTEEEEEESSSTTCCTTTCCEEEECCH--HHH---------
T ss_pred HHHHHHHHhCCc-EEEECCChhhcccccc--c---cccCCCEEEEeeCchhccCcchheEEEEeCH--HHH---------
Confidence 368899999997 5569999987654321 1 2335788999999999999999999999987 333
Q ss_pred hhhhHHhhhhhhh-hccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCC
Q 047983 81 SISLNMRMDDYLL-LSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSE 159 (233)
Q Consensus 81 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~ 159 (233)
..+..... .+.+...+ .++...++. .++..+.++.+.++++.+.+.|+++ ++.. .+|.++++.|
T Consensus 218 -----~~l~~~~~~~~~~~~~~-~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~~~~~~~~----- 282 (337)
T 3p1t_A 218 -----AAMKRKQWFCNVGTLDL-HALEAALDN--DRAREAHIAKTLAQRRRVADALRGL-GYRV-ASSEANFVLV----- 282 (337)
T ss_dssp -----HHHHTTSCTTCSCHHHH-HHHHHHHTC--HHHHHHHHHHHHHHHHHHHHHHHHT-TCCB-CCCSSSEEEE-----
T ss_pred -----HHHHhhcCCCCCCHHHH-HHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHHC-cCEE-CCCCCeEEEE-----
Confidence 33332222 22223333 444444432 2345566677788889999999887 5553 5666655444
Q ss_pred CcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeecCHHHHHHHHHHHHHHH
Q 047983 160 DKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAVEPSAFEIGLGRMKAFY 226 (233)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~~~~~l~~~~~~l~~~l 226 (233)
..+ +...+.+.|+++||.+.||+.|+..+++|+|++ ++++++..++.|+++.
T Consensus 283 -----~~~---------~~~~~~~~l~~~gi~v~~g~~~~~~~~iRis~~-~~~~~~~l~~al~~~~ 334 (337)
T 3p1t_A 283 -----ENA---------AGERTLRFLRERGIQVKDAGQFGLHHHIRISIG-REEDNDRLLAALAEYS 334 (337)
T ss_dssp -----ECT---------TTHHHHHHHHHTTEECEEGGGGTCCSEEEEECC-CHHHHHHHHHHHHHHT
T ss_pred -----EcC---------CHHHHHHHHHHCCeEEEECccCCCCCeEEEecC-CHHHHHHHHHHHHHHh
Confidence 222 223456677889999999999998899999998 5666777777776654
No 78
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=99.85 E-value=2.5e-21 Score=170.39 Aligned_cols=182 Identities=14% Similarity=0.113 Sum_probs=128.1
Q ss_pred CcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhhhhhhHHhhhh
Q 047983 11 GIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHSISLNMRMDD 90 (233)
Q Consensus 11 ~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (233)
++..|.|++|. ++ +.++..+. .+++|+++||||.|+++|+|+||++++++ ++++. + ..+..
T Consensus 219 ~~~~i~d~~~~----~~--~~s~~~~~-~~~~i~~~S~SK~~g~~G~RiG~~~~~~~-~l~~~---l--------~~~~~ 279 (427)
T 2hox_A 219 GCKSIYDMVYY----WP--HYTPIKYK-ADEDILLFTMSKFTGHSGSRFGWALIKDE-SVYNN---L--------LNYMT 279 (427)
T ss_dssp TCEEEEECTTC----ST--TTSCCCSC-BCCSEEEEEHHHHTSCGGGCCEEEEECCH-HHHHH---H--------HHHHH
T ss_pred CCCEEEeeccc----CC--CCCccccC-CCceEEEEeChhcCCCCCceEEEEEECCH-HHHHH---H--------HHHHH
Confidence 34456666664 22 22333343 57899999999999999999999999632 34421 1 22333
Q ss_pred hhhhccCcchHHHHHHHHhhhc----------HHHHHHHHHHHHHHHHHHHHHHhhcCCCccc-------------ccCC
Q 047983 91 YLLLSESVYTTVGAVPQILEKT----------EEEFFSKITDILREAADICCDRLKEIPCITC-------------PKKP 147 (233)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~l~~~----------~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-------------~~~~ 147 (233)
....+.+...| .+...+++.. .++++++.++.++++++.+.+.|++++++.. +..|
T Consensus 280 ~~~~~~~~~~q-~a~~~~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~p 358 (427)
T 2hox_A 280 KNTEGTPRETQ-LRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSDRFSYQELPQSEYCNYFRRMRP 358 (427)
T ss_dssp HHTSSCCHHHH-HHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTTSSSEECCCCCSCEEETTTTEEEC
T ss_pred hcCCCCCHHHH-HHHHHHhhcchhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHhCcCccccccccccccccccccCC
Confidence 22233333344 3444445432 2357788999999999999999988755432 1357
Q ss_pred CccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC-CCcEEEEeecCHHHHHHHHHHHHHHH
Q 047983 148 EGSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL-KDWLRITFAVEPSAFEIGLGRMKAFY 226 (233)
Q Consensus 148 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~-~~~~Rl~~~~~~~~l~~~~~~l~~~l 226 (233)
++|+|+| ++++. ++.+++.++++++||.+.||+.|+. .+|+|+|++.+++++++++++|.+++
T Consensus 359 ~~g~f~~---------~~~~~-------~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~Ris~~~~~e~l~~~l~~l~~~~ 422 (427)
T 2hox_A 359 PSPSYAW---------VKCEW-------EEDKDCYQTFQNGRINTQNGVGFEASSRYVRLSLIKTQDDFDQLMYYLKDMV 422 (427)
T ss_dssp CCCSEEE---------EEECS-------GGGCSHHHHHHHTTEECEEGGGGTSCTTEEEEECSSCHHHHHHHHHHHHHHH
T ss_pred CCceEEE---------EECCC-------cHHHHHHHHHHHCCEEEcCCCccCCCCCEEEEEecCCHHHHHHHHHHHHHHH
Confidence 7899999 55542 2456677778889999999999986 78999999999999999999999987
Q ss_pred HH
Q 047983 227 YR 228 (233)
Q Consensus 227 ~~ 228 (233)
++
T Consensus 423 ~~ 424 (427)
T 2hox_A 423 KA 424 (427)
T ss_dssp TC
T ss_pred hh
Confidence 54
No 79
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=99.84 E-value=2.4e-21 Score=167.64 Aligned_cols=185 Identities=16% Similarity=0.087 Sum_probs=129.1
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCC-ccccccccC-CccCEEEEccCccccCCCCceEEEEEe--cCCCccccccchh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNT-HFVPMGVFG-SIVPVLTLGSISKRWIVPGWRLGWLVT--SDPNGILQDLGVA 77 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~-~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~R~G~~~~--~~~~~~~~~~~~~ 77 (233)
+|+++|++||+++|+||+|+++.+++. ...++..+. ..+++++++|+||.++++|+|+||+++ +++ ++++ .+.
T Consensus 193 ~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~-~~~~--~l~ 269 (394)
T 2ay1_A 193 EIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVLIAASCSKNFGIYRERTGCLLALCADA-ATRE--LAQ 269 (394)
T ss_dssp HHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSEEEEEECTTTTTCGGGCEEEEEEECSSH-HHHH--HHH
T ss_pred HHHHHHHHCCCEEEEecCccccccCcccchHHHHHHhhcCCCEEEEEeccCCCcCcCCccceEEEEeCCH-HHHH--HHH
Confidence 689999999999999999999987641 222333232 236799999999999999999999998 331 2322 122
Q ss_pred hhhhhhhHHhhhhhhh-hccCcchHH-HHHHHHhhhc-----HHHHHHHHHHHHHHHHHHHHHHhhcCC---CcccccCC
Q 047983 78 FFHSISLNMRMDDYLL-LSESVYTTV-GAVPQILEKT-----EEEFFSKITDILREAADICCDRLKEIP---CITCPKKP 147 (233)
Q Consensus 78 ~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~l~~~-----~~~~~~~~~~~~~~~~~~l~~~L~~~~---~~~~~~~~ 147 (233)
..+..... ...++++.. .+....++.. ..++.+++++.++++++.+.+.|++++ ++.. ..|
T Consensus 270 --------~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~~~ 340 (394)
T 2ay1_A 270 --------GAMAFLNRQTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRLREQLAGELRDLSGSDRFGF-VAE 340 (394)
T ss_dssp --------HHHHHHHHTTTSSCCCHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSTTTH-HHH
T ss_pred --------HHHHHHHhhhcCCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCeeE-EcC
Confidence 22221111 111223333 4444444332 246889999999999999999998853 3543 567
Q ss_pred CccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec-CHHHHHHHHHHHHHH
Q 047983 148 EGSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV-EPSAFEIGLGRMKAF 225 (233)
Q Consensus 148 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~-~~~~l~~~~~~l~~~ 225 (233)
.+|+|+| +.++ .+.+.++++++||.+.|| +|++++. +++++++++++|.++
T Consensus 341 ~~g~~~~---------~~~~----------~~~~~~~l~~~gi~v~~~--------~Ris~~~~~~~~i~~~~~~l~~~ 392 (394)
T 2ay1_A 341 HRGMFSR---------LGAT----------PEQVKRIKEEFGIYMVGD--------SRINIAGLNDNTIPILARAIIEV 392 (394)
T ss_dssp CCSSEEE---------CCCC----------HHHHHHHHHHHCEECCTT--------CEEEGGGCCTTTHHHHHHHHHHH
T ss_pred CceEEEe---------eCCC----------HHHHHHHHHhCCEEecCC--------CeEEeecCCHhhHHHHHHHHHHc
Confidence 8899999 4332 245678888999999984 5999986 888899999998765
No 80
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=99.84 E-value=2.9e-20 Score=161.20 Aligned_cols=194 Identities=12% Similarity=0.159 Sum_probs=131.7
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccc-cCCccC-EEEEccCccccCCCCceEEEEEecCCCccccccchhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGV-FGSIVP-VLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAF 78 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~-~~~~~~-~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~ 78 (233)
++|+++|++||++||+||+|+.+.++... .++.. .+..++ .++++|+||.++.+| ||+++++ ++++. +.
T Consensus 193 ~~l~~~~~~~~~~li~De~~~~~~~~~~~-~~~~~~~~~~~~~di~~~s~sK~~~~~G---G~~~~~~--~~~~~--l~- 263 (398)
T 3a2b_A 193 PELTSIANEFDAAVMVDDAHSLGVIGHKG-AGTASHFGLNDDVDLIMGTFSKSLASLG---GFVAGDA--DVIDF--LK- 263 (398)
T ss_dssp HHHHHHHHHHTCEEEEECTTTTTTSSGGG-CCHHHHHTCGGGCSEEEEESSSTTCSSC---EEEEECH--HHHHH--HH-
T ss_pred HHHHHHHHHcCcEEEEECCCcccccCCCC-CchHhhcCCCcCCeEEEecccccccCCC---cEEEeCH--HHHHH--HH-
Confidence 37899999999999999999988764322 22222 233345 599999999999889 9999976 44421 11
Q ss_pred hhhhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecC
Q 047983 79 FHSISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGS 158 (233)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~ 158 (233)
.....+...+.+.+.+.++....++. .++.++.++.++++++.+.+.|+++ ++.. ..|. |+|+|
T Consensus 264 -------~~~~~~~~~~~~~~~~~a~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~~-g~~~~---- 327 (398)
T 3a2b_A 264 -------HNARSVMFSASMTPASVASTLKALEI--IQNEPEHIEKLWKNTDYAKAQLLDH-GFDL-GATE-SPILP---- 327 (398)
T ss_dssp -------HHCHHHHSSBCCCHHHHHHHHHHHHH--HHHCTHHHHHHHHHHHHHHHHHHHT-TCCB-CSCC-SSEEE----
T ss_pred -------HhcccceecCCCCHHHHHHHHHHHHH--HhhCHHHHHHHHHHHHHHHHHHHhc-CCCc-CCCC-CCEEE----
Confidence 11111222222223332333333432 2456788999999999999999887 5554 4565 67888
Q ss_pred CCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC---CCcEEEEeec--CHHHHHHHHHHHHHHHHHHh
Q 047983 159 EDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL---KDWLRITFAV--EPSAFEIGLGRMKAFYYRHA 230 (233)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~---~~~~Rl~~~~--~~~~l~~~~~~l~~~l~~~~ 230 (233)
+.++... +..++..+ |.++||.+.||+.|+. .+++|++++. +++++++++++|.+++++..
T Consensus 328 -----~~~~~~~-----~~~~l~~~-l~~~gi~v~~~~~~~~~~~~~~iRis~~~~~~~e~i~~~~~~l~~~l~~~~ 393 (398)
T 3a2b_A 328 -----IFIRSNE-----KTFWVTKM-LQDDGVFVNPVVSPAVPAEESLIRFSLMATHTYDQIDEAIEKMVKVFKQAE 393 (398)
T ss_dssp -----EECCCHH-----HHHHHHHH-HHHTTEECEEECTTTSCGGGCEEEEECCTTCCHHHHHHHHHHHHHHHHHCC
T ss_pred -----EEcCCHH-----HHHHHHHH-HHHCCcEEEeeCCCCCCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHHhC
Confidence 5553211 13344444 4455999999998863 5899999996 89999999999999987653
No 81
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=99.83 E-value=1.7e-19 Score=155.10 Aligned_cols=181 Identities=17% Similarity=0.133 Sum_probs=127.7
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCcc-CEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIV-PVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~-~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
+++.++|+.+++++|+||+|+++.++. . .+...+..+ +++++.|+||.++++|+|+||+++++ +++
T Consensus 184 ~~l~~l~~~~~~~li~De~~~~~~~~~-~--~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--~~~-------- 250 (369)
T 3cq5_A 184 DDVERIINVAPGIVIVDEAYAEFSPSP-S--ATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVANP--AFI-------- 250 (369)
T ss_dssp HHHHHHHHHCSSEEEEECTTGGGCCSC-C--GGGGTTTCTTTEEEEEESSSTTSCGGGCCEEEEECT--HHH--------
T ss_pred HHHHHHHHhCCCEEEEECCchhhcCCc-c--hHHHHhhCCCCEEEEEechHhcCCcccceEEEEeCH--HHH--------
Confidence 368899999999999999999987541 1 122224445 89999999999999999999999987 333
Q ss_pred hhhhhHHhhhhhh-hhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecC
Q 047983 80 HSISLNMRMDDYL-LLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGS 158 (233)
Q Consensus 80 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~ 158 (233)
..+.... .++.++..+ .+....++. .+++++.++.++++++.+.+.|++. ++.. . |.+|.|+|
T Consensus 251 ------~~l~~~~~~~~~~~~~~-~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~-~~~~~~~~---- 314 (369)
T 3cq5_A 251 ------DAVMLVRLPYHLSALSQ-AAAIVALRH--SADTLGTVEKLSVERVRVAARLEEL-GYAV-V-PSESNFVF---- 314 (369)
T ss_dssp ------HHHHTTSCTTCSCHHHH-HHHHHHHHT--HHHHHTHHHHHHHHHHHHHHHHHHH-TCEE-E-CCSSSEEE----
T ss_pred ------HHHHHcCCCCCCCHHHH-HHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHhC-CCEE-C-CCCCeEEE----
Confidence 3333221 123222222 444444432 4578889999999999999999875 5543 3 44567888
Q ss_pred CCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeecCHHHHHHHHHHHHHHHH
Q 047983 159 EDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAVEPSAFEIGLGRMKAFYY 227 (233)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~~~~~l~~~~~~l~~~l~ 227 (233)
++++ . +..++. +.|.++||.+.|| +..+++|++++ ++++++++++.|.++++
T Consensus 315 -----~~~~--~-----~~~~l~-~~l~~~gi~v~~~---~~~~~iRis~~-~~~~i~~~~~~l~~~~~ 366 (369)
T 3cq5_A 315 -----FGDF--S-----DQHAAW-QAFLDRGVLIRDV---GIAGHLRTTIG-VPEENDAFLDAAAEIIK 366 (369)
T ss_dssp -----EECC--S-----SHHHHH-HHHHHTTEECBCC---SCTTEEEEECC-CHHHHHHHHHHHHHHHT
T ss_pred -----EECC--C-----CHHHHH-HHHHHCCEEEEEC---CCCCeEEEEeC-CHHHHHHHHHHHHHHHh
Confidence 5443 1 244444 4456889999998 34689999998 67788999999887764
No 82
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=99.80 E-value=4.1e-19 Score=150.76 Aligned_cols=175 Identities=18% Similarity=0.222 Sum_probs=120.5
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHS 81 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~ 81 (233)
+|.++++..| ++|+||+|.++..+ .. +..++..++++++.|+||.|+++|+|+||+++++ +++
T Consensus 159 ~l~~l~~~~~-~li~De~~~~~~~~--~~--~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~--~~~---------- 221 (335)
T 1uu1_A 159 EIERILKTGA-FVALDEAYYEFHGE--SY--VDFLKKYENLAVIRTFSKAFSLAAQRVGYVVASE--KFI---------- 221 (335)
T ss_dssp HHHHHHHTTC-EEEEECTTHHHHCC--CC--GGGGGTCSSEEEEEESTTTTTCGGGCCEEEEECH--HHH----------
T ss_pred HHHHHHHhCC-EEEEECcchhhcch--hH--HHHhhhCCCEEEEecchhhcCCcccCeEEEEeCH--HHH----------
Confidence 5677777778 89999999987642 11 2223455789999999999999999999999976 333
Q ss_pred hhhHHhhhhhh-hhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCCC
Q 047983 82 ISLNMRMDDYL-LLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSED 160 (233)
Q Consensus 82 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~ 160 (233)
..+.... .++.++..+ .++.+.++. .+++++.++.++++++.+.+.|+++ ++.. .|.+|+|+|
T Consensus 222 ----~~l~~~~~~~~~~~~~~-~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~--~~~~~~~~~------ 285 (335)
T 1uu1_A 222 ----DAYNRVRLPFNVSYVSQ-MFAKVALDH--REIFEERTKFIVEERERMKSALREM-GYRI--TDSRGNFVF------ 285 (335)
T ss_dssp ----HHHHHHSCTTCSCHHHH-HHHHHHHHT--HHHHHHHHHHHHHHHHHHHHHHHHH-TCCB--CCCCSSEEE------
T ss_pred ----HHHHHhcCCCCcCHHHH-HHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHHC-CcEE--cCCCCeEEE------
Confidence 3332221 133333333 444444543 4578889999999999999999887 4542 355678899
Q ss_pred cccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeecCHHHHHHHHHHHHHH
Q 047983 161 KCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAVEPSAFEIGLGRMKAF 225 (233)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~~~~~l~~~~~~l~~~ 225 (233)
++++. . +...+.+.|.++||.+.|+ .+++|++++. ++++++++++|+++
T Consensus 286 ---~~~~~-----~--~~~~~~~~l~~~gi~v~~~-----~~~iRis~~~-~~~i~~~~~~l~~~ 334 (335)
T 1uu1_A 286 ---VFMEK-----E--EKERLLEHLRTKNVAVRSF-----REGVRITIGK-REENDMILRELEVF 334 (335)
T ss_dssp ---EECCT-----H--HHHHHHHHHHHHTEEEEEE-----TTEEEEECCC-HHHHHHHHHHHHCC
T ss_pred ---EECCC-----C--CHHHHHHHHHHCCEEEEEC-----CCeEEEEeCC-HHHHHHHHHHHHhh
Confidence 55431 0 3333444455789999982 4799999975 45688888888653
No 83
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=99.79 E-value=6.6e-18 Score=145.14 Aligned_cols=202 Identities=12% Similarity=0.040 Sum_probs=130.1
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|+++|++||++||+||+|+.+.+. .+ +...++.+++.|+||.++.++ ++||+++++ .+++.+.-....
T Consensus 166 ~~i~~l~~~~~~~li~D~a~~~~~~~----~~---~~~~~~di~~~s~sK~~~~~~-g~G~~~~~~--~~~~~~~~~~~~ 235 (386)
T 2dr1_A 166 PELAKVAKEHDKLVFVDAVSAMGGAD----IK---FDKWGLDVVFSSSQKAFGVPP-GLAIGAFSE--RFLEIAEKMPER 235 (386)
T ss_dssp HHHHHHHHHTTCEEEEECTTTBTTBC----CC---TTTTTCSEEEEETTSTTCCCS-SCEEEEECH--HHHHHHTTCTTC
T ss_pred HHHHHHHHHcCCeEEEEccccccCcc----cc---ccccCCcEEEEeccccccCCC-ceEEEEECH--HHHHHHhcCCCC
Confidence 37899999999999999999975432 12 223356799999999988763 399999987 444321000000
Q ss_pred --hhhhHHhhhhhh---hhccCcchHH-HHHHHHhhhcHHH--HHHHHHHHHHHHHHHHHHHhhcCCCcccccCCC---c
Q 047983 81 --SISLNMRMDDYL---LLSESVYTTV-GAVPQILEKTEEE--FFSKITDILREAADICCDRLKEIPCITCPKKPE---G 149 (233)
Q Consensus 81 --~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~l~~~~~~--~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~---~ 149 (233)
..+......... ....+++... .++...++. ..+ .+++.++.++++++++.+.|+++ ++.. ..|+ .
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~-~~~~g~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~~~~~~ 312 (386)
T 2dr1_A 236 GWYFDIPLYVKYLKEKESTPSTPPMPQVFGINVALRI-IEKMGGKEKWLEMYEKRAKMVREGVREI-GLDI-LAEPGHES 312 (386)
T ss_dssp CSTTCHHHHHHHHHHHSSCSSCCCHHHHHHHHHHHHH-HHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCCB-SSCTTCBC
T ss_pred ceEEeHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH-HHHhcCHHHHHHHHHHHHHHHHHHHHHc-CCee-CcCccccC
Confidence 000000011110 1111223322 333333322 223 37788999999999999999887 5554 4454 3
Q ss_pred cEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEee--cCHHHHHHHHHHHHHHHH
Q 047983 150 SMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFA--VEPSAFEIGLGRMKAFYY 227 (233)
Q Consensus 150 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~--~~~~~l~~~~~~l~~~l~ 227 (233)
+.++| ++++. +. +..++..+++ ++||.+.||+.+...+++|++++ .+++++++++++|.++++
T Consensus 313 ~~~~~---------~~~~~----~~-~~~~~~~~l~-~~gi~v~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~ 377 (386)
T 2dr1_A 313 PTITA---------VLTPP----GI-KGDEVYEAMR-KRGFELAKGYGSVKEKTFRIGHMGYMKFEDIQEMLDNLREVIN 377 (386)
T ss_dssp SSEEE---------EECCT----TC-CHHHHHHHHH-HTTEECEECCGGGTTTEEEEECCSSCCHHHHHHHHHHHHHHHH
T ss_pred CceEE---------EEcCC----CC-CHHHHHHHHH-HCCeEEecCccccCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 67788 55442 11 3455555555 55999999998766789999999 489999999999999998
Q ss_pred HHh
Q 047983 228 RHA 230 (233)
Q Consensus 228 ~~~ 230 (233)
+..
T Consensus 378 ~~~ 380 (386)
T 2dr1_A 378 ELK 380 (386)
T ss_dssp HHH
T ss_pred HcC
Confidence 764
No 84
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.78 E-value=7.2e-18 Score=145.61 Aligned_cols=198 Identities=12% Similarity=0.096 Sum_probs=126.1
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh-
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF- 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~- 79 (233)
++|+++|+++|++||+||+|+ + +. .+.. +...++.+++.|+||.++.+| |+||+++++ .+++. +.+.
T Consensus 179 ~~i~~l~~~~~~~li~Dea~~-~--g~-~~~~---~~~~~~di~~~s~sK~l~~~~-~~G~l~~~~--~~~~~--~~~~~ 246 (393)
T 1vjo_A 179 EGVGELCREFGTLLLVDTVTS-L--GG-VPIF---LDAWGVDLAYSCSQKGLGCSP-GASPFTMSS--RAIEK--LQRRR 246 (393)
T ss_dssp TTHHHHHHHHTCEEEEECTTT-T--TT-SCCC---TTTTTCSEEECCSSSTTCSCS-SCEEEEECH--HHHHH--HHTCS
T ss_pred HHHHHHHHHcCCEEEEECCcc-c--cC-cCCc---ccccCccEEEEcCcccccCCC-ceEEEEECH--HHHHH--HhccC
Confidence 479999999999999999999 2 22 2222 233456689999999989888 999999987 44431 1000
Q ss_pred ---hhh--hhH--Hhhhhhhhhcc-CcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCc-
Q 047983 80 ---HSI--SLN--MRMDDYLLLSE-SVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEG- 149 (233)
Q Consensus 80 ---~~~--~~~--~~~~~~~~~~~-~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~- 149 (233)
... +.. ........... +++... .++...++...+.++++.++.++++++++.+.|+++ ++.. ..|.+
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~~~~ 324 (393)
T 1vjo_A 247 TKVANWYLDMNLLGKYWGSERVYHHTAPINLYYALREALRLIAQEGLANCWQRHQKNVEYLWERLEDI-GLSL-HVEKEY 324 (393)
T ss_dssp SCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCB-SSCGGG
T ss_pred CCCCceecCcHhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHc-CCcc-cCCccc
Confidence 000 000 00000001111 223332 344444433233457889999999999999999887 5654 45554
Q ss_pred --cEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEe-e--cCHHHHHHHHHHHHH
Q 047983 150 --SMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITF-A--VEPSAFEIGLGRMKA 224 (233)
Q Consensus 150 --g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~-~--~~~~~l~~~~~~l~~ 224 (233)
+.+++ ++++. +. +..++...+++++||.+.||+.|...+++|+++ + .+++++++++++|.+
T Consensus 325 ~~~~~~~---------~~~~~----~~-~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~~~~i~~~~~~l~~ 390 (393)
T 1vjo_A 325 RLPTLTT---------VCIPD----GV-DGKAVARRLLNEHNIEVGGGLGELAGKVWRVGLMGFNSRKESVDQLIPALEQ 390 (393)
T ss_dssp BCSSEEE---------EECCT----TC-CHHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHH
T ss_pred cCCcEEE---------EEcCC----CC-CHHHHHHHHHhhCCEEEecCccccCCCEEEEeCCccCChHHHHHHHHHHHHH
Confidence 34555 44432 11 345555555544599999999888789999994 3 367789999999988
Q ss_pred HH
Q 047983 225 FY 226 (233)
Q Consensus 225 ~l 226 (233)
++
T Consensus 391 ~l 392 (393)
T 1vjo_A 391 VL 392 (393)
T ss_dssp HH
T ss_pred Hh
Confidence 76
No 85
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.78 E-value=2.8e-18 Score=150.48 Aligned_cols=197 Identities=18% Similarity=0.147 Sum_probs=129.1
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccC-CccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFG-SIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|+++|++||+++|+||+|+.+.++.........++ ..+..+++.|+||.++++| ||+++++ ++++. +.
T Consensus 214 ~~l~~l~~~~g~~li~Dea~~~~~~~~~g~~~~~~~~~~~~~di~~~s~sK~~g~~g---G~v~~~~--~l~~~--l~-- 284 (427)
T 2w8t_A 214 KEMVAVAKKHGAMVLVDEAHSMGFFGPNGRGVYEAQGLEGQIDFVVGTFSKSVGTVG---GFVVSNH--PKFEA--VR-- 284 (427)
T ss_dssp HHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSCC---EEEEECC--TTGGG--GG--
T ss_pred HHHHHHHHHcCCEEEEECCccccccCCCCCchHhhcCCCcCCcEEEecchhhhccCC---CEEEeCH--HHHHH--HH--
Confidence 3789999999999999999999887632211111122 2245799999999998888 9999987 55542 11
Q ss_pred hhhhhHHhhhhhhhhccCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecC
Q 047983 80 HSISLNMRMDDYLLLSESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGS 158 (233)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~ 158 (233)
.....+.. +.+.++.. ++....++. .++..+.++.++++++++.+.|+++ ++....++..|.++|
T Consensus 285 ------~~~~~~~~-~~~~~~~~~aa~~~al~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~---- 350 (427)
T 2w8t_A 285 ------LACRPYIF-TASLPPSVVATATTSIRK--LMTAHEKRERLWSNARALHGGLKAM-GFRLGTETCDSAIVA---- 350 (427)
T ss_dssp ------GTCHHHHS-SCCCCHHHHHHHHHHHHH--HTSCHHHHHHHHHHHHHHHHHHHHH-TCEESCSSCCSSEEE----
T ss_pred ------Hhcccccc-cCCCCHHHHHHHHHHHHH--HhcCHHHHHHHHHHHHHHHHHHHHc-CCcccCCCCCCCEEE----
Confidence 11112211 22222222 333222221 1235678899999999999999887 554321442456778
Q ss_pred CCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC---CCcEEEEeec--CHHHHHHHHHHHHHHHHHHhh
Q 047983 159 EDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL---KDWLRITFAV--EPSAFEIGLGRMKAFYYRHAK 231 (233)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~---~~~~Rl~~~~--~~~~l~~~~~~l~~~l~~~~~ 231 (233)
+.++... +...+.+.|.++||.+.|+..|+. .+++|++++. +++++++++++|.+++++...
T Consensus 351 -----~~~~~~~------~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRi~~~~~~t~e~i~~~~~~l~~~l~~~~~ 417 (427)
T 2w8t_A 351 -----VMLEDQE------QAAMMWQALLDGGLYVNMARPPATPAGTFLLRCSICAEHTPAQIQTVLGMFQAAGRAVGV 417 (427)
T ss_dssp -----EEESSHH------HHHHHHHHHHHTTEECEEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHHTC
T ss_pred -----EEECCHH------HHHHHHHHHHHCCeEEeeeCCCCCCCCCeEEEEEeCCCCCHHHHHHHHHHHHHHHHHhCc
Confidence 5553211 233444445566999999987764 4699999996 899999999999999987653
No 86
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.78 E-value=2.5e-19 Score=158.61 Aligned_cols=199 Identities=14% Similarity=0.093 Sum_probs=116.8
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHS 81 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~ 81 (233)
+|+++|++||++||+||+|.+|.+.+.. ......+. ...+.||||.++. |+|+||+++++ ++++.+
T Consensus 250 ~l~~l~~~~~~llI~DEv~~g~g~~g~~-~a~~~~~~---~pdi~t~sK~~~~-G~~~G~~~~~~--~i~~~~------- 315 (453)
T 4ffc_A 250 TLTAWASENGVVFIADEVQTGFARTGAW-FASEHEGI---VPDIVTMAKGIAG-GMPLSAVTGRA--ELMDAV------- 315 (453)
T ss_dssp HHHHHHHHHTCEEEEECTTTTTTTTSSS-STHHHHTC---CCSEEEECGGGGT-TSSCEEEEEEH--HHHTTS-------
T ss_pred HHHHHHHHcCCEEEEecCccCCCccccc-chhhhcCC---CcchHhhhhhhcC-CcCeEEEEECH--HHHhhh-------
Confidence 6899999999999999999998766532 11111221 2224589999876 99999999987 444321
Q ss_pred hhhHHhhhhhhhhccCcchHHHHHHHHhhhc-HHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCCC
Q 047983 82 ISLNMRMDDYLLLSESVYTTVGAVPQILEKT-EEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSED 160 (233)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~ 160 (233)
.......+++.++..++++++.+ +.. .++..++.++.....++.+.+.+++++.+.. ..+. |.|+|
T Consensus 316 ----~~~~~~~t~~~~~~~~aaa~aal-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~-~~~~-g~~~~------ 382 (453)
T 4ffc_A 316 ----YAGGLGGTYGGNPVTCAAAVAAL-GVMRELDLPARARAIEASVTSRLSALAEEVDIIGE-VRGR-GAMLA------ 382 (453)
T ss_dssp ----CTTSSCCSSSSCHHHHHHHHHHH-HHHHHTTHHHHHHHHHHHHHHHHHHHHHHCSSEEE-EEEE-TTEEE------
T ss_pred ----cccCcCCCCCcCHHHHHHHHHHH-HHhhhhhHHHHHHHHHHHHHHHHHHHHhhCCCeEE-EEee-ceEEE------
Confidence 12222233444444443444443 211 1233344444444444444444445554432 3333 55666
Q ss_pred ccccccccccc-CCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEee--cCHHHHHHHHHHHHHHHHHHhhc
Q 047983 161 KCLLKLNYSLL-EGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFA--VEPSAFEIGLGRMKAFYYRHAKK 232 (233)
Q Consensus 161 ~~~~~~~~~~~-~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~--~~~~~l~~~~~~l~~~l~~~~~~ 232 (233)
+.+..... .+.......+.+.+.++||.+.|+..|+ +++|+++. .+++++++++++|.+++++..++
T Consensus 383 ---~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~--~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~~~ 452 (453)
T 4ffc_A 383 ---IEIVKPGTLEPDAALTKSIAAEALSQGVLILTCGTFG--NVIRLLPPLVIGDDLLDEGITALSDIIRAKASH 452 (453)
T ss_dssp ---EEEBCTTSCCBCHHHHHHHHHHHHHTTEECCEECTTS--CEEEECCCTTCCHHHHHHHHHHHHHHHHHHC--
T ss_pred ---EEEecCcccCCCHHHHHHHHHHHHhCCCEEecCCCCC--CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence 33311000 0000123445556668899999987664 68898766 38999999999999999887654
No 87
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.77 E-value=4.1e-18 Score=147.15 Aligned_cols=195 Identities=13% Similarity=0.082 Sum_probs=124.0
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccC-CccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFG-SIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|+++|++||+++|+||+|+...++..........+ ..++.+++.|+||.++ |.+.||+++++ ++++. +
T Consensus 195 ~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~--g~~gG~~~~~~--~~~~~--~--- 265 (399)
T 3tqx_A 195 KSICDLADKYNALVMVDDSHAVGFIGENGRGTPEYCGVADRVDILTGTLGKALG--GASGGYTSGHK--EIIEW--L--- 265 (399)
T ss_dssp HHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHHTCTTCCSEEEEESSSSSC--SSCCEEEEECH--HHHHH--H---
T ss_pred HHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCCcEEEecchHhcc--cCceEEEEcCH--HHHHH--H---
Confidence 3799999999999999999974333332221122222 1245699999999987 34449999987 44421 1
Q ss_pred hhhhhHHhhhhhhhhccCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecC
Q 047983 80 HSISLNMRMDDYLLLSESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGS 158 (233)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~ 158 (233)
.........+.+.+... .+....++ ...++.++.++.++++++++.+.|+++ ++.. .++. |.++|
T Consensus 266 ------~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~~-~~~~~---- 331 (399)
T 3tqx_A 266 ------RNRSRPYLFSNTVAPVIVATSLKVLE-LLKTEGPQLRKQLQENSRYFRAGMEKL-GFQL-VPGN-HPIIP---- 331 (399)
T ss_dssp ------HHHCHHHHSSCCCCHHHHHHHHHHHH-HHHHTHHHHHHHHHHHHHHHHHHHHHH-TCCB-CCCS-SSEEE----
T ss_pred ------HHhCcceeccCCCcHHHHHHHHHHHH-HHhhccHHHHHHHHHHHHHHHHHHHHc-CCCc-CCCC-CCEEE----
Confidence 11111111222233322 22222222 122668899999999999999999887 5543 3444 55667
Q ss_pred CCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccC-C--CCcEEEEee--cCHHHHHHHHHHHHHHHHHH
Q 047983 159 EDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVG-L--KDWLRITFA--VEPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~-~--~~~~Rl~~~--~~~~~l~~~~~~l~~~l~~~ 229 (233)
+.++... +..++..+ |.++||.+.|+..+. . .+++|++++ .+++++++++++|.+++++.
T Consensus 332 -----~~~~~~~-----~~~~~~~~-l~~~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 396 (399)
T 3tqx_A 332 -----VMLGDAQ-----LATNMADH-LLQEGIYVVGFSYPVVPMGKARIRVQMSAVHTQQQLDRAIEAFGQVGKKL 396 (399)
T ss_dssp -----EEEECHH-----HHHHHHHH-HHHTTEECCEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHT
T ss_pred -----EEeCCHH-----HHHHHHHH-HHHCCCEEeeeCCCCCCCCCceEEEEeecCCCHHHHHHHHHHHHHHHHHh
Confidence 4444211 13444444 556799999865543 2 469999998 48999999999999998765
No 88
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.77 E-value=7.3e-19 Score=153.54 Aligned_cols=194 Identities=17% Similarity=0.116 Sum_probs=113.9
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|+++|++||++||+||+|++|.+++.. ..+... +..+.+.||||.++. |+|+||+++++ ++++.+
T Consensus 223 ~~l~~l~~~~~~~li~De~~~~~~~~g~~-~~~~~~---~~~~di~s~sK~~~~-GlriG~~~~~~--~~~~~l------ 289 (426)
T 1sff_A 223 QRLRALCDEHGIMLIADEVQSGAGRTGTL-FAMEQM---GVAPDLTTFAKSIAG-GFPLAGVTGRA--EVMDAV------ 289 (426)
T ss_dssp HHHHHHHHHHTCEEEEECTTTTTTTTSSS-SGGGGT---TSCCSEEEECGGGGT-SSCCEEEEEEH--HHHTTS------
T ss_pred HHHHHHHHHcCCEEEEechhhccCcccch-hhhhhc---CCCCCEEEEcccccC-CCceEEEEEcH--HHHhhh------
Confidence 36899999999999999999998766532 122111 222334599999887 99999999987 444321
Q ss_pred hhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhc----CCCcccccCCCccEEEEEe
Q 047983 81 SISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKE----IPCITCPKKPEGSMFVMYC 156 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~~~~~~g~~~~~~ 156 (233)
.......+++.++..+.++.+. ++...+ ....+.++++++.+.+.|++ ++.+. ...+. |+|+|
T Consensus 290 -----~~~~~~~~~~~~~~~~~a~~aa-l~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~~~~~-g~~~~-- 356 (426)
T 1sff_A 290 -----APGGLGGTYAGNPIACVAALEV-LKVFEQ---ENLLQKANDLGQKLKDGLLAIAEKHPEIG-DVRGL-GAMIA-- 356 (426)
T ss_dssp -----CTTSBCCSSSSCHHHHHHHHHH-HHHHHH---TTHHHHHHHHHHHHHHHHHHHHHTCTTEE-EEEEE-TTEEE--
T ss_pred -----ccCCcCcCCCCCHHHHHHHHHH-HHHHHh---cCHHHHHHHHHHHHHHHHHHHHHhCCCeE-EEEEE-EEEEE--
Confidence 1111112223333333233322 221111 12334455555555555543 33222 13454 67888
Q ss_pred cCCCccccccccccc---CCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEee--cCHHHHHHHHHHHHHHHHHHh
Q 047983 157 GSEDKCLLKLNYSLL---EGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFA--VEPSAFEIGLGRMKAFYYRHA 230 (233)
Q Consensus 157 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~--~~~~~l~~~~~~l~~~l~~~~ 230 (233)
+.++.... +.. .+...+...|.++||.+.||+.| .+++|++++ .+++++++++++|.+++++.+
T Consensus 357 -------~~~~~~~~~~~~~~-~~~~~l~~~l~~~gi~v~~~~~~--~~~iRi~~~~~~~~~~i~~~~~~l~~~l~~~~ 425 (426)
T 1sff_A 357 -------IELFEDGDHNKPDA-KLTAEIVARARDKGLILLSCGPY--YNVLRILVPLTIEDAQIRQGLEIISQCFDEAK 425 (426)
T ss_dssp -------EEEBGGGCTTSBCH-HHHHHHHHHHHHTTEECEEESTT--SCEEEECCCTTCCHHHHHHHHHHHHHHHHHHC
T ss_pred -------EEEecCccccCCCh-HHHHHHHHHHHHCCcEEecCCCC--CCEEEEECCccCCHHHHHHHHHHHHHHHHHHh
Confidence 44421000 000 02333444455779999998765 489999986 489999999999999987753
No 89
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.77 E-value=4.1e-18 Score=149.37 Aligned_cols=195 Identities=12% Similarity=0.088 Sum_probs=113.1
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCcccccccc-CCccCEEEEccCccccCCCC-ceEEEEEecCCCccccccchhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVF-GSIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~~~~G-~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
+|+++|++||++||+||+|.+|.+++.. ..+... +...+ +.+|||.++. | +|+||+++++ +++
T Consensus 216 ~l~~l~~~~~~~li~DEv~~~~~~~g~~-~~~~~~~~~~~d---i~t~sK~l~~-G~~r~G~~~~~~--~i~-------- 280 (430)
T 3i4j_A 216 RVRDICDEAGIIFIADEVMSGMGRCGSP-LALSRWSGVTPD---IAVLGKGLAA-GYAPLAGLLAAP--QVY-------- 280 (430)
T ss_dssp HHHHHHHHHTCEEEEECTTTTTTTTSSS-SGGGGTTTCCCS---EEEECGGGTT-TSSCCEEEEECH--HHH--------
T ss_pred HHHHHHHHcCCEEEEechhhCCCcccch-hhhhhhcCCCCc---EEEEcccccC-CccccEEEEECH--HHH--------
Confidence 6899999999999999999998776632 222222 22223 3378999885 9 9999999987 344
Q ss_pred hhhhhHHhhhh-------hhhhccCcchHHHHHHHHhhhc-HHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccE
Q 047983 80 HSISLNMRMDD-------YLLLSESVYTTVGAVPQILEKT-EEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSM 151 (233)
Q Consensus 80 ~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~ 151 (233)
..+.. ..+++.++..+.++++.+ +.. .+++.+..++..+..++.+.+.+++++.+.. .++.|.
T Consensus 281 ------~~~~~~~~~~~~~~t~~~~~~~~aaa~aal-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~g~- 351 (430)
T 3i4j_A 281 ------ETVMGGSGAFMHGFTYAGHPVSVAAGLSVL-DIVEREDLTGAAKERGAQLLAGLQALQARFPQMMQ-VRGTGL- 351 (430)
T ss_dssp ------HHHHHTTCBCCCCCTTTTCHHHHHHHHHHH-HHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEE-EEEETT-
T ss_pred ------HHHhccCCcccccCCCCCCHHHHHHHHHHH-HHHHcccHHHHHHHHHHHHHHHHHHHHHhCCCeEE-EEEEEE-
Confidence 33321 122333333333444444 211 2234455555555555555555555655543 455544
Q ss_pred EEEEecCCCcccccccccccC-CC--CChHHHHHHHHhccCEEEECCcccC-C--CCcEEEEee--cCHHHHHHHHHHHH
Q 047983 152 FVMYCGSEDKCLLKLNYSLLE-GI--NSDTEFALKLAKEESIIVLPGITVG-L--KDWLRITFA--VEPSAFEIGLGRMK 223 (233)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~ll~~~gi~v~pg~~f~-~--~~~~Rl~~~--~~~~~l~~~~~~l~ 223 (233)
|+| +.+...... .. .+....+.+.|.++||.+.|+..+. + .+++|++++ .+++++++++++|.
T Consensus 352 ~~~---------~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~ 422 (430)
T 3i4j_A 352 LLG---------VVLGDLATGQAFETPGIASRIGAAALKRGLITYPGSGAEPNGRGDHLLLGPPLSITAAEVDGLLALLA 422 (430)
T ss_dssp EEE---------EEEC------------CHHHHHHHHHHTTEECC-----------CEEEECCCTTCCHHHHHHHHHHHH
T ss_pred EEE---------EEeccccccCCCccHHHHHHHHHHHHhCCCEEEecccccCCCCCCEEEEECCCCCCHHHHHHHHHHHH
Confidence 555 332210000 00 0112344555558899999984322 2 578999988 48999999999999
Q ss_pred HHHHHH
Q 047983 224 AFYYRH 229 (233)
Q Consensus 224 ~~l~~~ 229 (233)
+++++.
T Consensus 423 ~~l~~~ 428 (430)
T 3i4j_A 423 GALEDV 428 (430)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 999865
No 90
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.77 E-value=8.8e-18 Score=145.60 Aligned_cols=191 Identities=14% Similarity=0.136 Sum_probs=129.2
Q ss_pred ChHHHHHHHcCcEEEEccccCc-cccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGH-LVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~-~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|.++|++||+++|+||+|+. +.+.+.....+ . ...+++.|+|| +++|.|+||++++++ .++
T Consensus 181 ~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~---~--~~di~~~s~sK--~l~g~~~G~~~~~~~-~~~-------- 244 (407)
T 2dkj_A 181 KAFREIADEVGAYLVVDMAHFAGLVAAGLHPNPL---P--YAHVVTSTTHK--TLRGPRGGLILSNDP-ELG-------- 244 (407)
T ss_dssp HHHHHHHHHHTCEEEEECTTTHHHHHTTCSCCCT---T--TCSEEEEESSG--GGCCCSCEEEEESCH-HHH--------
T ss_pred HHHHHHHHHcCCEEEEEccccccccccCccCCcc---c--cccEEEEeccc--cCCCCCceEEEECCH-HHH--------
Confidence 3789999999999999999998 65554322111 1 24688999999 456889999999831 333
Q ss_pred hhhhhHHhhhhhh-hhccCcchH--HHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEe
Q 047983 80 HSISLNMRMDDYL-LLSESVYTT--VGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYC 156 (233)
Q Consensus 80 ~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~ 156 (233)
..+.... ....+.+.+ ..++...++.....++++.++.++++++++.+.|+++ ++..+.++.+++++|
T Consensus 245 ------~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~-- 315 (407)
T 2dkj_A 245 ------KRIDKLIFPGIQGGPLEHVIAGKAVAFFEALQPEFKEYSRLVVENAKRLAEELARR-GYRIVTGGTDNHLFL-- 315 (407)
T ss_dssp ------HHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEE--
T ss_pred ------HHHHhhhcccccCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhC-CceeecCCCCceEEE--
Confidence 2222221 122222222 2233333332223577889999999999999999887 555433345788888
Q ss_pred cCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCccc----C--CCCcEEEEee------cCHHHHHHHHHHHHH
Q 047983 157 GSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITV----G--LKDWLRITFA------VEPSAFEIGLGRMKA 224 (233)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f----~--~~~~~Rl~~~------~~~~~l~~~~~~l~~ 224 (233)
+.++.. +. +...+.+.|.++||.+.||..| + ..+++|+++. .+++++++++++|.+
T Consensus 316 -------~~~~~~---~~--~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~ 383 (407)
T 2dkj_A 316 -------VDLRPK---GL--TGKEAEERLDAVGITVNKNAIPFDPKPPRVTSGIRIGTPAITTRGFTPEEMPLVAELIDR 383 (407)
T ss_dssp -------EECGGG---TC--CHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCGGGHHHHHHHHHH
T ss_pred -------EECccc---CC--CHHHHHHHHHHcCceecCCcCccccccccCCCceeeecccccccCCCHHHHHHHHHHHHH
Confidence 555421 11 3444555667899999998764 2 2578999995 578899999999999
Q ss_pred HHHH
Q 047983 225 FYYR 228 (233)
Q Consensus 225 ~l~~ 228 (233)
++++
T Consensus 384 ~~~~ 387 (407)
T 2dkj_A 384 ALLE 387 (407)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 9877
No 91
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.77 E-value=5.4e-18 Score=146.89 Aligned_cols=193 Identities=13% Similarity=0.098 Sum_probs=127.3
Q ss_pred ChHHHHHHHcCcEEEEccccC-cccc-CCCccccccccCCccCEEEEccCcccc-CCCCceEEEEEecCCCccccccchh
Q 047983 1 FCIEETTKKLGIMVIADEVYG-HLVF-GNTHFVPMGVFGSIVPVLTLGSISKRW-IVPGWRLGWLVTSDPNGILQDLGVA 77 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~-~~~~-~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~R~G~~~~~~~~~~~~~~~~~ 77 (233)
++|+++|++||+++|+||+|+ ++.+ ++....+...+.+ +..+++.|+||.+ +.+| ||+++++ ++++. +
T Consensus 197 ~~i~~l~~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~-~~di~~~s~sK~~~~~~g---G~~~~~~--~~~~~--l- 267 (401)
T 1fc4_A 197 KGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMG-RVDIITGTLGKALGGASG---GYTAARK--EVVEW--L- 267 (401)
T ss_dssp HHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTT-CCSEEEEESSSTTCSSSC---EEEEECH--HHHHH--H-
T ss_pred HHHHHHHHHcCCEEEEECcccccccCCCCCccHHHcCCCc-CCcEEEecchhhccCCCC---EEEEcCH--HHHHH--H-
Confidence 378999999999999999996 7763 3433222222333 4569999999998 7776 9999976 44421 1
Q ss_pred hhhhhhhHHhhhhhhhhccCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEe
Q 047983 78 FFHSISLNMRMDDYLLLSESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYC 156 (233)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~ 156 (233)
.........+.+.+... .+....++. . +..++.++.++++++++.+.|+++ ++.. . |.++.++|
T Consensus 268 --------~~~~~~~~~~~~~~~~~~~a~~~~l~~-~-~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~-~~~~~~~~-- 332 (401)
T 1fc4_A 268 --------RQRSRPYLFSNSLAPAIVAASIKVLEM-V-EAGSELRDRLWANARQFREQMSAA-GFTL-A-GADHAIIP-- 332 (401)
T ss_dssp --------HHHCHHHHHSCCCCHHHHHHHHHHHHH-H-HTCHHHHHHHHHHHHHHHHHHHHT-TCCB-C-CSSSSEEE--
T ss_pred --------HHhCcCceeCCCCCHHHHHHHHHHHHH-H-hcCHHHHHHHHHHHHHHHHHHHHc-CCcc-c-CCCCCEEE--
Confidence 11111111122233332 222222221 1 124678889999999999999887 5553 3 56778888
Q ss_pred cCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC---CCcEEEEee--cCHHHHHHHHHHHHHHHHHHh
Q 047983 157 GSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL---KDWLRITFA--VEPSAFEIGLGRMKAFYYRHA 230 (233)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~---~~~~Rl~~~--~~~~~l~~~~~~l~~~l~~~~ 230 (233)
+.++... +...+.+.|.++||.+.||..|+. .+++|++++ .+++++++++++|.+++++..
T Consensus 333 -------~~~~~~~------~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 398 (401)
T 1fc4_A 333 -------VMLGDAV------VAQKFARELQKEGIYVTGFFYPVVPKGQARIRTQMSAAHTPEQITRAVEAFTRIGKQLG 398 (401)
T ss_dssp -------EEEECHH------HHHHHHHHHHHTTEECCEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHTT
T ss_pred -------EEcCChH------HHHHHHHHHHHCCcEEeeecCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHhC
Confidence 5553211 334444555667999999987764 468999998 489999999999999988753
No 92
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.76 E-value=1.8e-18 Score=152.94 Aligned_cols=195 Identities=16% Similarity=0.056 Sum_probs=113.7
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHS 81 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~ 81 (233)
+|+++|++||++||+||+|.+|.+++.. ..+...+.... +.||||.++. |+|+||+++++ ++++.+
T Consensus 252 ~l~~l~~~~g~~lI~DEv~~g~g~~g~~-~~~~~~~~~pd---i~t~sK~l~~-G~~iG~v~~~~--~~~~~~------- 317 (451)
T 3oks_A 252 TLLDWCRKNDVVFIADEVQTGFARTGAM-FACEHEGIDPD---LIVTAKGIAG-GLPLSAVTGRA--EIMDSP------- 317 (451)
T ss_dssp HHHHHHHHTTCEEEEECTTTTTTTTSSS-SGGGGGTCCCS---EEEECGGGGT-TSSCEEEEEEH--HHHTCS-------
T ss_pred HHHHHHHHcCCEEEEEecccCCCccccc-hhhhhcCCCCC---eeeehhhhhC-CcceEEEEECH--HHHhhh-------
Confidence 6899999999999999999998766532 22222222222 3389999876 99999999987 454321
Q ss_pred hhhHHhhhhhhhhccCcchHHHHHHHHhhhc-HHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCCC
Q 047983 82 ISLNMRMDDYLLLSESVYTTVGAVPQILEKT-EEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSED 160 (233)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~ 160 (233)
.......+++.++..++++++.+ +.. .++..++.++.....++.+.+.+++++.+.. ..+. |.++|
T Consensus 318 ----~~~~~~~t~~~~~~~~aaa~aal-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~~~-G~~~~------ 384 (451)
T 3oks_A 318 ----HVSGLGGTYGGNPIACAAALATI-ETIESEGLVARAQQIEKIMKDRLGRLQAEDDRIGD-VRGR-GAMIA------ 384 (451)
T ss_dssp ----CTTSBCCSSSSCHHHHHHHHHHH-HHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEE-EEEE-TTEEE------
T ss_pred ----cCCCcCCCCCCCHHHHHHHHHHH-HHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCeEE-EEEe-eEEEE------
Confidence 12222233444444443444443 211 1223333444444444444444444554432 3343 55666
Q ss_pred ccccccccccc-CCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEee--cCHHHHHHHHHHHHHHHHH
Q 047983 161 KCLLKLNYSLL-EGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFA--VEPSAFEIGLGRMKAFYYR 228 (233)
Q Consensus 161 ~~~~~~~~~~~-~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~--~~~~~l~~~~~~l~~~l~~ 228 (233)
+.+..... .+.......+.+.+.++||.+.|+..|+ +++|+++. .+++++++++++|.+++++
T Consensus 385 ---~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~--~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 450 (451)
T 3oks_A 385 ---MELVKAGTTEPDADLTKALCAGAHAAGVIVLSCGTYG--NVVRFLPPLSIGDDLLNEGLDVLEEVLRG 450 (451)
T ss_dssp ---EEEBSTTSCCBCHHHHHHHHHHHHHTTEECEEECTTS--CEEEECCCTTCCHHHHHHHHHHHHHHHHC
T ss_pred ---EEEecCccCCCCHHHHHHHHHHHHhCCcEEecCCCCC--CEEEEECCCCCCHHHHHHHHHHHHHHHhh
Confidence 32211000 0000134445556668899999987665 68899766 3899999999999998863
No 93
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.76 E-value=4.9e-18 Score=147.27 Aligned_cols=195 Identities=15% Similarity=0.128 Sum_probs=124.0
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCC-ccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGS-IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|+++|++||+++|+||+|+...++......+...+. ....++++|+||.|+++| ||+++++ ++++. +
T Consensus 198 ~~i~~l~~~~~~~li~Dea~~~g~~~~~g~~~~~~~~~~~~~~i~~~s~sK~~~~~G---G~~~~~~--~~~~~---l-- 267 (401)
T 2bwn_A 198 KEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYGVFG---GYIAASA--RMVDA---V-- 267 (401)
T ss_dssp HHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESSSTTCSCC---EEEEECH--HHHHH---H--
T ss_pred HHHHHHHHHcCCEEEEeccccccccCCCCceeeeccCccccCcEEEeechhhccCCC---CEEecCH--HHHHH---H--
Confidence 37899999999999999999965554322111111221 134689999999999999 9999976 34321 1
Q ss_pred hhhhhHHhhhhhhhhccCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecC
Q 047983 80 HSISLNMRMDDYLLLSESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGS 158 (233)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~ 158 (233)
........++.+.++.. .++...++......+++.++.++++++++.+.|+++ ++.. ..|.++ ++|
T Consensus 268 ------~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~~~~-~~~---- 334 (401)
T 2bwn_A 268 ------RSYAPGFIFSTSLPPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKAL-GMPI-IDHGSH-IVP---- 334 (401)
T ss_dssp ------HHHCHHHHTSBCCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHH-TCCB-CCCSSS-CEE----
T ss_pred ------HHhCcCceecCCCCHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHC-CCcc-cCCCCC-eEE----
Confidence 11111112222223322 222222221111234678889999999999999887 5554 456665 677
Q ss_pred CCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC---CCcEEEEeec--CHHHHHHHHHHHHHHHHH
Q 047983 159 EDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL---KDWLRITFAV--EPSAFEIGLGRMKAFYYR 228 (233)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~---~~~~Rl~~~~--~~~~l~~~~~~l~~~l~~ 228 (233)
+.++... +..++..++++++||.+.|+..|+. .+++|++++. +++++++++++|.+++++
T Consensus 335 -----~~~~~~~-----~~~~~~~~L~~~~gi~v~~~~~~~~~~~~~~iRis~~~~~t~~~i~~~~~~l~~~~~~ 399 (401)
T 2bwn_A 335 -----VVIGDPV-----HTKAVSDMLLSDYGVYVQPINFPTVPRGTERLRFTPSPVHDLKQIDGLVHAMDLLWAR 399 (401)
T ss_dssp -----EECCCHH-----HHHHHHHHHHHHHCEECCEECTTTSCTTCCEEEECCCTTSCHHHHHHHHHHHHHHC--
T ss_pred -----EEeCChH-----HHHHHHHHHHhcCCEEEeecCCCCCCCCCceEEEEeeCCCCHHHHHHHHHHHHHHHHh
Confidence 4443111 1334455555688999999887764 2689999994 899999999999988764
No 94
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.75 E-value=3.5e-18 Score=150.19 Aligned_cols=193 Identities=14% Similarity=0.117 Sum_probs=110.1
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHS 81 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~ 81 (233)
+|+++|++||++||+||+|++|..++.. ..+...+...+++ |+||.++ +|+|+||+++++ .+++. +
T Consensus 226 ~l~~l~~~~~~~li~DE~~~g~g~~g~~-~~~~~~~~~~di~---s~sK~~~-~G~riG~~~~~~--~~~~~--~----- 291 (439)
T 3dxv_A 226 KFADICRAHGILVVCDEVKVGLARSGRL-HCFEHEGFVPDIL---VLGKGLG-GGLPLSAVIAPA--EILDC--A----- 291 (439)
T ss_dssp HHHHHHHHTTCEEEEECTTTCTTTTSSS-SGGGGTTCCCSEE---EECGGGG-TTSCCEEEEEEH--HHHTS--C-----
T ss_pred HHHHHHHHcCCEEEEeccccCCCcCchh-hHHHhcCCCCCEE---EEcchhc-CCcceEEEEECH--HHHhh--h-----
Confidence 6899999999999999999987655531 2222222223333 9999988 599999999987 44432 1
Q ss_pred hhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhh----cCCCcccccCCCccEEEEEec
Q 047983 82 ISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLK----EIPCITCPKKPEGSMFVMYCG 157 (233)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~----~~~~~~~~~~~~~g~~~~~~~ 157 (233)
.......++ .++..+.++.+.+ +...+ ....+.++++++.+.+.|+ .++.... .++. |.|+|
T Consensus 292 ----~~~~~~~t~-~~~~~~~aa~aal-~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~-g~~~~--- 357 (439)
T 3dxv_A 292 ----SAFAMQTLH-GNPISAAAGLAVL-ETIDR---DDLPAMAERKGRLLRDGLSELAKRHPLIGD-IRGR-GLACG--- 357 (439)
T ss_dssp ----SSSSCCTTT-TCHHHHHHHHHHH-HHHHH---TTHHHHHHHHHHHHHHHHHHHHHHCTTEEE-EEEE-TTEEE---
T ss_pred ----cCCCcCCCc-ccHHHHHHHHHHH-HHHHh---cCHHHHHHHHHHHHHHHHHHHHHhCCCeEE-EEEE-EEEEE---
Confidence 111112223 3333332444443 21111 2233344444444444443 3444432 3444 55566
Q ss_pred CCCcccccccccccC--CCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEee--cCHHHHHHHHHHHHHHHHHHh
Q 047983 158 SEDKCLLKLNYSLLE--GINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFA--VEPSAFEIGLGRMKAFYYRHA 230 (233)
Q Consensus 158 ~~~~~~~~~~~~~~~--~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~--~~~~~l~~~~~~l~~~l~~~~ 230 (233)
+.+...... +.......+.+.|.++||.+.|+..+ .+++|+++. .+++++++++++|.+++++..
T Consensus 358 ------~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~--~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 426 (439)
T 3dxv_A 358 ------MELVCDRQSREPARAETAKLIYRAYQLGLVVYYVGMN--GNVLEFTPPLTITETDIHKALDLLDRAFSELS 426 (439)
T ss_dssp ------EEEEEETTTTEECHHHHHHHHHHHHHHTEECEEESTT--SCEEEECCCTTCCHHHHHHHHHHHHHHHHTGG
T ss_pred ------EEEecCccccCCCHHHHHHHHHHHHHCCcEEeecCCC--CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 322100000 00012334444555679999998543 489999765 489999999999999998763
No 95
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.75 E-value=7.2e-18 Score=149.39 Aligned_cols=211 Identities=13% Similarity=0.021 Sum_probs=120.8
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHS 81 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~ 81 (233)
+|+++|++||++||+||+|++|.+.+... .....+.... +.+|||.++..++|+||+++++ ++++. +.. .
T Consensus 246 ~l~~l~~~~~~llI~DEv~~g~gr~g~~~-~~~~~~~~pd---i~t~sK~l~gG~~~lg~v~~~~--~i~~~--~~~-~- 315 (460)
T 3gju_A 246 KIQAVLKKYDVLLVADEVVTGFGRLGTMF-GSDHYGIKPD---LITIAKGLTSAYAPLSGVIVAD--RVWQV--LVQ-G- 315 (460)
T ss_dssp HHHHHHHHTTCEEEEECTTTTTTTTSSSC-HHHHHTCCCS---EEEECGGGTTTSSCCEEEEEEH--HHHHH--HHH-H-
T ss_pred HHHHHHHHcCCEEEEeccccCCCcccccc-hHhhcCCCCC---eeeeehhhcCCCCCeEEEEECH--HHHHH--Hhc-c-
Confidence 68999999999999999999987665321 1222222222 3478999655338999999987 34421 100 0
Q ss_pred hhhHHhhhhhhhhccCcchHHHHHHHHhhhc-HHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCCC
Q 047983 82 ISLNMRMDDYLLLSESVYTTVGAVPQILEKT-EEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSED 160 (233)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~ 160 (233)
......+....+++.++..++++++.+ +.. .++..++.++.....++.+.+.+++++.+.. ..+.|.++.+.+. ++
T Consensus 316 ~~~~~~~~~~~t~~~~~~~~aaa~aal-~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~g~~~~~~~~-~~ 392 (460)
T 3gju_A 316 SDKLGSLGHGWTYSAHPICVAAGVANL-ELIDEMDLVTNAGETGAYFRAELAKAVGGHKNVGE-VRGDGMLAAVEFV-AD 392 (460)
T ss_dssp HHHHCSCSCCCTTTTCHHHHHHHHHHH-HHHHHTTHHHHHHHHHHHHHHHHHHHHTTSTTEEE-EEEETTEEEEEEC-SB
T ss_pred cccccccccCCCCCCCHHHHHHHHHHH-HHHHhccHHHHHHHHHHHHHHHHHHHHhcCCCeEE-EeeeeEEEEEEEc-cC
Confidence 000000011123333333333444443 221 2345666667777777777777777655543 4555554443111 11
Q ss_pred cccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEee--cCHHHHHHHHHHHHHHHHHHhhc
Q 047983 161 KCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFA--VEPSAFEIGLGRMKAFYYRHAKK 232 (233)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~--~~~~~l~~~~~~l~~~l~~~~~~ 232 (233)
..+ ..++.. .......+.+.|.++||.+.|++ ..+++|++.. .+++++++++++|.+++++..++
T Consensus 393 ~~~-~~~~~~---~~~~~~~~~~~l~~~Gv~v~~~~---~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~~~ 459 (460)
T 3gju_A 393 KDD-RVFFDA---SQKIGPQVATALAASGVIGRAMP---QGDILGFAPPLCLTREQADIVVSKTADAVKSVFAN 459 (460)
T ss_dssp TTT-TBCCCG---GGCHHHHHHHHHHHTTEECEECS---SSCEEEECCCTTCCHHHHHHHHHHHHHHHHHHHC-
T ss_pred ccc-cccccc---hHHHHHHHHHHHHHCCeEEecCC---CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence 000 000000 00123445555667899999976 3589999944 58999999999999999887643
No 96
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.75 E-value=4.3e-17 Score=141.85 Aligned_cols=191 Identities=11% Similarity=0.031 Sum_probs=124.0
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCC-ccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGS-IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|+++|++||++||+||+|+...++..........+. .+..|++.|+||.++.+| ||+++++ .+++. +
T Consensus 206 ~~l~~la~~~~~~li~De~~~~g~~g~~g~~~~~~~~~~~~~di~~~s~sK~~~~~g---g~v~~~~--~~~~~---~-- 275 (409)
T 3kki_A 206 AELVNISKEFGCALLVDESHSLGTHGPNGAGLLAELGLTREVHFMTASLAKTFAYRA---GAIWCNN--EVNRC---V-- 275 (409)
T ss_dssp HHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSSC---EEEEESS--SGGGT---H--
T ss_pred HHHHHHHHHcCCEEEEECCccccccCCCCCcchhhcCCCCCCCEEEeecchhhCCCc---eEEEECH--HHHHH---H--
Confidence 37999999999999999999986554322111111221 244588999999998876 9999988 45431 1
Q ss_pred hhhhhHHhhhhhhhhccCcchHH--HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEec
Q 047983 80 HSISLNMRMDDYLLLSESVYTTV--GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCG 157 (233)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~ 157 (233)
........++.+.++.. ++.+++ + ..+..++.++.++++++++.+.|+++ ++.. . .++.++|
T Consensus 276 ------~~~~~~~~~~~~~~~~~~aa~~aal-~--~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~--~-~~~~~~~--- 339 (409)
T 3kki_A 276 ------PFISYPAIFSSTLLPYEAAGLETTL-E--IIESADNRRQHLDRMARKLRIGLSQL-GLTI--R-SESQIIG--- 339 (409)
T ss_dssp ------HHHCHHHHHSBCCCHHHHHHHHHHH-H--HHHHCHHHHHHHHHHHHHHHHHHHTT-TCCC--C-CSSSEEE---
T ss_pred ------HHhCcCccccCCCcHHHHHHHHHHH-H--HHhcCHHHHHHHHHHHHHHHHHHHHc-CCcc--C-CCCCEEE---
Confidence 12111122232333332 333333 1 12223678889999999999999987 4443 2 4677888
Q ss_pred CCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC---CCcEEEEeec--CHHHHHHHHHHHHHHHHHH
Q 047983 158 SEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL---KDWLRITFAV--EPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~---~~~~Rl~~~~--~~~~l~~~~~~l~~~l~~~ 229 (233)
+.++... +..++..+ |.++||.+.|+..+.. .+++|+++.. +++++++++++|.+++++.
T Consensus 340 ------~~~~~~~-----~~~~~~~~-L~~~Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~~ 404 (409)
T 3kki_A 340 ------LETGDER-----NTEKVRDY-LESNGVFGSVFCRPATSKNKNIIRLSLNSDVNDEQIAKIIEVCSDAVNYG 404 (409)
T ss_dssp ------EEEESHH-----HHHHHHHH-HHHTTEECEEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHS
T ss_pred ------EEeCCHH-----HHHHHHHH-HHHCCceEeeeCCCCcCCCCcEEEEEccCCCCHHHHHHHHHHHHHHHhcC
Confidence 5554321 13344444 5566999988554322 5799999984 8999999999999998763
No 97
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=99.75 E-value=3.7e-17 Score=141.22 Aligned_cols=199 Identities=13% Similarity=0.057 Sum_probs=127.3
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|+++|++||+++|+||+|+.... +..+ ...++.+++.|+||.++.+| +||+++++ ++++.+.-.. +
T Consensus 184 ~~i~~l~~~~~~~li~D~~~~~g~~----~~~~---~~~~~d~~~~s~~K~~g~~G--~G~~~~~~--~~~~~~~~~~-~ 251 (406)
T 1kmj_A 184 AEMITLAHQHGAKVLVDGAQAVMHH----PVDV---QALDCDFYVFSGHKLYGPTG--IGILYVKE--ALLQEMPPWE-G 251 (406)
T ss_dssp HHHHHHHHHTTCEEEEECTTTTTTS----CCCH---HHHTCSEEEEEGGGTTSCTT--CEEEEECH--HHHHHCCCSS-C
T ss_pred HHHHHHHHHcCCEEEEEchhhcCCC----CCcc---cccCCCEEEEEchhccCCCC--cEEEEEeH--HHHhhcCCcc-c
Confidence 3789999999999999999986321 1122 22245689999999998888 89999986 4443211100 0
Q ss_pred hhhhHHhh-hh--------hhhhccCcchHH--HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCC--
Q 047983 81 SISLNMRM-DD--------YLLLSESVYTTV--GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKP-- 147 (233)
Q Consensus 81 ~~~~~~~~-~~--------~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-- 147 (233)
.-...... .. ...+..+.++.. .++...++...+.++++.++.++++++++.+.|++++++.. ..|
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~ 330 (406)
T 1kmj_A 252 GGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQLESVPDLTL-YGPQN 330 (406)
T ss_dssp STTSEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTSTTEEE-ESCTT
T ss_pred CCCceeecccccccccCCCchhccCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEE-ecCCC
Confidence 00000000 00 001111222222 33423332222345778889999999999999998877664 456
Q ss_pred CccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCccc--------CCCCcEEEEeec--CHHHHHH
Q 047983 148 EGSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITV--------GLKDWLRITFAV--EPSAFEI 217 (233)
Q Consensus 148 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f--------~~~~~~Rl~~~~--~~~~l~~ 217 (233)
.++++.| . ++ +. +..+ +.+.|.++||.+.||..| +..+++|++++. +++++++
T Consensus 331 ~~~~~~~---------~-~~-----~~-~~~~-~~~~l~~~gi~v~~g~~~~~~~~~~~g~~~~iRis~~~~~t~~~i~~ 393 (406)
T 1kmj_A 331 RLGVIAF---------N-LG-----KH-HAYD-VGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDR 393 (406)
T ss_dssp CCSEEEE---------E-ET-----TC-CHHH-HHHHHHHTTEECEEECTTCHHHHHHTTCSCEEEEECCTTCCHHHHHH
T ss_pred cCCEEEE---------E-EC-----CC-CHHH-HHHHHhhCCcEEEeccccchHHHHhcCCCCeEEEEeecCCCHHHHHH
Confidence 6777776 1 22 11 2334 446677889999998753 346899999996 8899999
Q ss_pred HHHHHHHHHHHH
Q 047983 218 GLGRMKAFYYRH 229 (233)
Q Consensus 218 ~~~~l~~~l~~~ 229 (233)
+++.|.++++..
T Consensus 394 ~~~~l~~~~~~l 405 (406)
T 1kmj_A 394 LVTGLQRIHRLL 405 (406)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhh
Confidence 999999888653
No 98
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.74 E-value=7.4e-18 Score=148.79 Aligned_cols=203 Identities=14% Similarity=0.130 Sum_probs=113.4
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCC-ceEEEEEecCCCccccccchhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
+|+++|++||++||+||+|.+|.++|... .....+.... +.||||.++. | +|+||+++++ ++++.+.-.
T Consensus 240 ~l~~l~~~~~~llI~DEv~~g~g~~g~~~-~~~~~~~~~d---i~t~sK~l~~-G~~~ig~~~~~~--~i~~~~~~~--- 309 (452)
T 3n5m_A 240 AVHETCQKHGALLISDEVICGFGRTGKAF-GFMNYDVKPD---IITMAKGITS-AYLPLSATAVKR--EIYEAFKGK--- 309 (452)
T ss_dssp HHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGTTCCCS---EEEECGGGGT-TSSCCEEEEEEH--HHHGGGCSS---
T ss_pred HHHHHHHHcCCEEEEecchhCCCcccccc-hhhhcCCCCC---EEeecccccC-CCcceEEEEECH--HHHHHHhhc---
Confidence 68999999999999999999987666421 2222222222 3479999876 9 9999999987 444321000
Q ss_pred hhhhHHhhhhhhhhccCcchHHHHHHHHhhhc-HHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCC
Q 047983 81 SISLNMRMDDYLLLSESVYTTVGAVPQILEKT-EEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSE 159 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~ 159 (233)
.....+....+++.++..++++++.+ +.. .++..++.++.....++.+.+.+++++.+.. ..+.|.+ ++
T Consensus 310 --~~~~~~~~~~t~~~~~~~~aaa~aal-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~~~g~~-~~----- 379 (452)
T 3n5m_A 310 --GEYEFFRHINTFGGNPAACALALKNL-EIIENENLIERSAQMGSLLLEQLKEEIGEHPLVGD-IRGKGLL-VG----- 379 (452)
T ss_dssp --STTCSCCCCCSSTTCHHHHHHHHHHH-HHHHHTTHHHHHHHHHHHHHHHHHHHHTTCTTEEE-EEESSSC-EE-----
T ss_pred --cCCCCccccCCCCCCHHHHHHHHHHH-HHHHhccHHHHHHHHHHHHHHHHHHHHhcCCCeEE-EEEEEEE-EE-----
Confidence 00000011122333333332444443 211 1223344444444444444444445554432 4455554 44
Q ss_pred Cccccccccccc--CCCC-ChHHHHHHHHhccCEEEECCcccCC--CCcEEEEee--cCHHHHHHHHHHHHHHHHH
Q 047983 160 DKCLLKLNYSLL--EGIN-SDTEFALKLAKEESIIVLPGITVGL--KDWLRITFA--VEPSAFEIGLGRMKAFYYR 228 (233)
Q Consensus 160 ~~~~~~~~~~~~--~~~~-~~~~~~~~ll~~~gi~v~pg~~f~~--~~~~Rl~~~--~~~~~l~~~~~~l~~~l~~ 228 (233)
+.+..... .... .....+.+.+.++||.+.|+..|.. .+++|++++ .+++++++++++|.+++++
T Consensus 380 ----i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 451 (452)
T 3n5m_A 380 ----IELVNDKETKEPIDNDKIASVVNACKEKGLIIGRNGMTTAGYNNILTLAPPLVISSEEIAFVIGTLKTAMER 451 (452)
T ss_dssp ----EEEEEETTTTEECCHHHHHHHHHHHHHTTEECEECTTSSTTCCCEEEECCCTTCCHHHHHHHHHHHHHHHTT
T ss_pred ----EEEecCCcccCCCCHHHHHHHHHHHHHCCcEEeecCcccCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 22210000 0000 0123455556678999999987654 589999754 5899999999999988753
No 99
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.73 E-value=8.1e-18 Score=145.72 Aligned_cols=186 Identities=11% Similarity=0.103 Sum_probs=111.9
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|.++|++||+++|+||+|.+|...+.. ......+ ....+.|+||.++. |+|+||+++++ +++ +
T Consensus 203 ~~l~~l~~~~~~~li~Dev~~~~g~~g~~-~~~~~~~---~~~d~~t~sK~~~~-G~~~G~~~~~~--~~~-----~--- 267 (395)
T 3nx3_A 203 KALRKLCDEKDILLIADEIQCGMGRSGKF-FAYEHAQ---ILPDIMTSAKALGC-GLSVGAFVINQ--KVA-----S--- 267 (395)
T ss_dssp HHHHHHHHHHTCEEEEECTTTTTTTTSSS-SGGGGGT---CCCSEEEECGGGTT-TSCCEEEEECH--HHH-----H---
T ss_pred HHHHHHHHHcCCEEEEEecccCCCcCCcc-hhHHhcC---CCCCEEEecccccC-CCceEEEEEch--hhh-----h---
Confidence 36899999999999999999998655532 1121122 12224589999875 99999999987 330 2
Q ss_pred hhhhHHhhhh---hhhhccCcchHHHHHHHHhhhc-HHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEe
Q 047983 81 SISLNMRMDD---YLLLSESVYTTVGAVPQILEKT-EEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYC 156 (233)
Q Consensus 81 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~ 156 (233)
..+.. ..+++.++..+.++.+.+ +.. .+++.++.++..+..++.+.+.+..++.+.. .++ .|.|+|
T Consensus 268 -----~~~~~~~~~~~~~~~~~~~~aa~aal-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~-~g~~~~-- 337 (395)
T 3nx3_A 268 -----NSLEAGDHGSTYGGNPLVCAGVNAVF-EIFKEEKILENVNKLTPYLEQSLDELINEFDFCKK-RKG-LGFMQG-- 337 (395)
T ss_dssp -----HHSCTTCCSSCBSCCHHHHHHHHHHH-HHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEE-EEE-ETTEEE--
T ss_pred -----hhcCCcccCCCCCCCHHHHHHHHHHH-HHHHhhHHHHHHHHHHHHHHHHHHHHHHhCCCeEE-EEe-EEEEEE--
Confidence 22221 122333333332444443 211 2234444444444445555555544554432 233 356777
Q ss_pred cCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEee--cCHHHHHHHHHHHHHHHHH
Q 047983 157 GSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFA--VEPSAFEIGLGRMKAFYYR 228 (233)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~--~~~~~l~~~~~~l~~~l~~ 228 (233)
+.++.. .+...+.+.|.++||.+.|++ .+++|+++. .+++++++++++|.+++++
T Consensus 338 -------~~~~~~------~~~~~~~~~l~~~Gi~v~~~~----~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 394 (395)
T 3nx3_A 338 -------LSLDKS------VKVAKVIQKCQENALLLISCG----ENDLRFLPPLILQKEHIDEMSEKLRKALKS 394 (395)
T ss_dssp -------EEECTT------SCHHHHHHHHHHTTEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred -------EEeCCc------chHHHHHHHHHHCCCEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 444321 133444555667899999864 589999865 4899999999999998863
No 100
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.73 E-value=3.8e-17 Score=144.70 Aligned_cols=204 Identities=11% Similarity=0.059 Sum_probs=116.9
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|.++|++||++||+||+|.+|...|... .....+.... +.+|||.++..|+|+||+++++ ++++. +..
T Consensus 243 ~~l~~l~~~~~~llI~DEv~~g~gr~G~~~-~~~~~~~~pd---i~t~sK~l~gg~~~lg~v~~~~--~i~~~--~~~-- 312 (459)
T 4a6r_A 243 PEIERICRKYDVLLVADEVICGFGRTGEWF-GHQHFGFQPD---LFTAAKGLSSGYLPIGAVFVGK--RVAEG--LIA-- 312 (459)
T ss_dssp HHHHHHHHHTTCEEEEECTTTTTTTTSSSS-HHHHHTCCCS---EEEECGGGGTTSSCCEEEEECH--HHHHH--HHH--
T ss_pred HHHHHHHHHcCCEEEEeccccCCCcccccc-hHhhcCCCCC---eeehhhhhcCCCCCccceeeCH--HHHHH--hhc--
Confidence 368999999999999999999987766321 1222222223 3378999777669999999987 44421 100
Q ss_pred hhhhHHhhhhhhhhccCcchHHHHHHHHhhhc-HHHHHHHHH-HHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecC
Q 047983 81 SISLNMRMDDYLLLSESVYTTVGAVPQILEKT-EEEFFSKIT-DILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGS 158 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~-~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~ 158 (233)
...+....+++.++..++++++.+ +.. .++..++.+ +.....++.+.+.|.+++.+.. ..+.|.++.+.+.+
T Consensus 313 ----~~~~~~~~t~~~~~~~~aaa~aal-~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~g~~~~~~~~~ 386 (459)
T 4a6r_A 313 ----GGDFNHGFTYSGHPVCAAVAHANV-AALRDEGIVQRVKDDIGPYMQKRWRETFSRFEHVDD-VRGVGMVQAFTLVK 386 (459)
T ss_dssp ----HCTTHHHHHHCSCHHHHHHHHHHH-HHHHHTCHHHHHHHTHHHHHHHHHHHHHTTCTTEEE-EEEETTEEEEEECS
T ss_pred ----CCCcccCCCCCCCHHHHHHHHHHH-HHHhcchHHHHHHHHHHHHHHHHHHHHHhcCCCeEE-EEEEEEEEEEEEec
Confidence 001122234444444443444444 221 223444444 4444445555455555554443 45555544431111
Q ss_pred CCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEe--ecCHHHHHHHHHHHHHHHHHHh
Q 047983 159 EDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITF--AVEPSAFEIGLGRMKAFYYRHA 230 (233)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~--~~~~~~l~~~~~~l~~~l~~~~ 230 (233)
+... +.++. ........+.+.|.++||.+.|+. +++|++. ..+++++++++++|.+++++..
T Consensus 387 -~~~~-~~~~~---~~~~~~~~~~~~l~~~Gv~v~~~g-----~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 450 (459)
T 4a6r_A 387 -NKAK-RELFP---DFGEIGTLCRDIFFRNNLIMRACG-----DHIVSAPPLVMTRAEVDEMLAVAERCLEEFE 450 (459)
T ss_dssp -BTTT-TBCCS---STTHHHHHHHHHHHHTTEECEEET-----TEEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred -Cccc-ccccc---chHHHHHHHHHHHHHCCeEEecCC-----CEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 1000 00000 000113444455567799999963 7999994 4599999999999999998764
No 101
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=99.73 E-value=4.6e-17 Score=139.63 Aligned_cols=190 Identities=13% Similarity=0.041 Sum_probs=119.7
Q ss_pred ChHHHHHHHcC--cEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCcc-ccccchh
Q 047983 1 FCIEETTKKLG--IMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGI-LQDLGVA 77 (233)
Q Consensus 1 ~~i~~l~~~~~--~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~-~~~~~~~ 77 (233)
++|+++|++|| ++||+||+|+. +. .+.++ ...+..+++.|+||.++.+| +||+++++ ++ +. ...
T Consensus 159 ~~i~~l~~~~~~~~~li~Dea~~~---~~-~~~~~---~~~~~di~~~s~sK~~g~~G--~G~~~~~~--~~~~~--~~~ 225 (384)
T 1eg5_A 159 EDVTRIVKKKNKETLVHVDAVQTI---GK-IPFSL---EKLEVDYASFSAHKFHGPKG--VGITYIRK--GVPIR--PLI 225 (384)
T ss_dssp HHHHHHHHHHCTTCEEEEECTTTT---TT-SCCCC---TTTCCSEEEEEGGGGTSCTT--CEEEEECT--TSCCC--CSB
T ss_pred HHHHHHHHhcCCceEEEEEhhhhc---CC-cccCc---hhcCCCEEEecHHHhcCCCc--eEEEEEcC--CCccc--ccc
Confidence 37899999999 99999999982 22 12222 22245689999999988888 79999987 33 11 111
Q ss_pred hhhhhhhHHhh---hhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCc--cEE
Q 047983 78 FFHSISLNMRM---DDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEG--SMF 152 (233)
Q Consensus 78 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~--g~~ 152 (233)
... ......+.+...+ .++...++. ..+++++.++.++++++++.+.|++. ++....++.+ +.+
T Consensus 226 --------~~~~~~~~~~~~~~~~~~~-~a~~~al~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~ 294 (384)
T 1eg5_A 226 --------HGGGQERGLRSGTQNVPGI-VGAARAMEI-AVEELSEAAKHMEKLRSKLVSGLMNL-GAHIITPLEISLPNT 294 (384)
T ss_dssp --------CSSCTTTTTBCSCCCHHHH-HHHHHHHHH-HHHTHHHHHHHHHHHHHHHHHHHHTT-TCEECSCTTSBCTTE
T ss_pred --------ccCcccccccCCCCChHHH-HHHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHhCCC-CeEEeCCcccCCCCE
Confidence 110 0111122222222 333333432 34578889999999999999999883 5554222222 234
Q ss_pred EEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC-------------------CCcEEEEee--cC
Q 047983 153 VMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL-------------------KDWLRITFA--VE 211 (233)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~-------------------~~~~Rl~~~--~~ 211 (233)
++ +.++ +. +..++ .+.|.++||.+.||+.|+. .+++|++++ .+
T Consensus 295 ~~---------~~~~-----~~-~~~~~-~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~ 358 (384)
T 1eg5_A 295 LS---------VSFP-----NI-RGSTL-QNLLSGYGIYVSTSSACTSKDERLRHVLDAMGVDRRIAQGAIRISLCKYNT 358 (384)
T ss_dssp EE---------EECT-----TC-CHHHH-HHHHHHTTEECBC------------CHHHHTTCCHHHHHHEEEEECCTTCC
T ss_pred EE---------EEeC-----CC-CHHHH-HHHHhhCCeEEeccccccCCCCcchHHHHHcCCChhhcCCeEEEECCCCCC
Confidence 44 3232 11 24444 4556788999999987753 368999999 48
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q 047983 212 PSAFEIGLGRMKAFYYRHA 230 (233)
Q Consensus 212 ~~~l~~~~~~l~~~l~~~~ 230 (233)
++++++++++|.+++++.+
T Consensus 359 ~~~i~~~~~~l~~~~~~~~ 377 (384)
T 1eg5_A 359 EEEVDYFLKKIEEILSFLD 377 (384)
T ss_dssp HHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998764
No 102
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.73 E-value=2.1e-17 Score=142.32 Aligned_cols=187 Identities=14% Similarity=0.075 Sum_probs=121.1
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|+++|++||++||+||+|+.+.++.........++. ...++++|+||.++.+| ||+++++ ++++
T Consensus 188 ~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~di~~~s~sK~~~~~G---G~~~~~~--~~~~-------- 253 (384)
T 1bs0_A 188 AEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKV-KPELLVVTFGKGFGVSG---AAVLCSS--TVAD-------- 253 (384)
T ss_dssp HHHHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTTC-CCSEEEEESSSTTSSCC---EEEEECH--HHHH--------
T ss_pred HHHHHHHHHcCcEEEEECCcccceecCCCCchHHhcCC-CCcEEEeeccchhhccC---cEEEeCH--HHHH--------
Confidence 37899999999999999999987653111111122222 22389999999999888 9999976 3442
Q ss_pred hhhhHHhhhhh---hhhccCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEe
Q 047983 81 SISLNMRMDDY---LLLSESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYC 156 (233)
Q Consensus 81 ~~~~~~~~~~~---~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~ 156 (233)
.+... ...+.+.++.. .+..+.++...+.+.++.++.++++++++.+.|+++ ++.. . +.++.++|
T Consensus 254 ------~l~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~-~~~~~~~~-- 322 (384)
T 1bs0_A 254 ------YLLQFARHLIYSTSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDL-PFTL-A-DSCSAIQP-- 322 (384)
T ss_dssp ------HHHHHCHHHHSSBCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTS-SCEE-C-SCCSSBCC--
T ss_pred ------HHHHhchhhhcCCCCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhc-CCcc-c-CCCCCEEE--
Confidence 22221 11121233332 222222221111166788999999999999999887 4543 3 35566777
Q ss_pred cCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC---CCcEEEEeec--CHHHHHHHHHHHHHH
Q 047983 157 GSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL---KDWLRITFAV--EPSAFEIGLGRMKAF 225 (233)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~---~~~~Rl~~~~--~~~~l~~~~~~l~~~ 225 (233)
+.++... +...+.+.|.++||.+.||+.|+. .+++|++++. +++++++++++|.++
T Consensus 323 -------~~~~~~~------~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~~Ri~~~~~~~~~~i~~~~~~l~~~ 383 (384)
T 1bs0_A 323 -------LIVGDNS------RALQLAEKLRQQGCWVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGN 383 (384)
T ss_dssp -------EEEESHH------HHHHHHHHHHHTTEECCEECTTSSCTTCEEECCBCCTTCCHHHHHHHHHHHHHH
T ss_pred -------EEeCCHH------HHHHHHHHHHHCCcEEEeecCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHhh
Confidence 4443111 333444455566999999988763 4799999985 789999999998764
No 103
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.73 E-value=1.6e-17 Score=145.68 Aligned_cols=192 Identities=14% Similarity=0.088 Sum_probs=114.3
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|+++|++||++||+||+|++|.+.+.. ..+...+...+ +.|+||.++. |+|+||+++++ +++
T Consensus 227 ~~l~~l~~~~~~~li~DEv~~~~g~~g~~-~~~~~~~~~~d---i~s~sK~~~~-G~~ig~~~~~~--~~~--------- 290 (433)
T 1zod_A 227 AALKRKCEARGMLLILDEAQTGVGRTGTM-FACQRDGVTPD---ILTLSKTLGA-GLPLAAIVTSA--AIE--------- 290 (433)
T ss_dssp HHHHHHHHHHTCEEEEECTTTTTTTTSSS-STHHHHTCCCS---EEEECHHHHT-TSSCEEEEECH--HHH---------
T ss_pred HHHHHHHHHhCCEEEEeccccCCCcCchH-hHHhhcCCCCC---EEEecccccC-CCCeeEEEEhH--HHH---------
Confidence 36899999999999999999998665532 11211222222 3489999886 99999999987 344
Q ss_pred hhhhHHhhhh---h--hhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhc----CCCcccccCCCccE
Q 047983 81 SISLNMRMDD---Y--LLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKE----IPCITCPKKPEGSM 151 (233)
Q Consensus 81 ~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~~~~~~g~ 151 (233)
..+.. . .+++.++..+.++.+.+ +...+ ....+.++++++.+.+.|++ ++.+.. .++. |.
T Consensus 291 -----~~~~~~~~~~~~t~~~~~~~~~a~~aal-~~~~~---~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~-~~~~-g~ 359 (433)
T 1zod_A 291 -----ERAHELGYLFYTTHVSDPLPAAVGLRVL-DVVQR---DGLVARANVMGDRLRRGLLDLMERFDCIGD-VRGR-GL 359 (433)
T ss_dssp -----HHHHHTTCCCCCTTTTCHHHHHHHHHHH-HHHHH---TTHHHHHHHHHHHHHHHHHHHHHHCTTEEE-EEEE-TT
T ss_pred -----HhhccCCCCCCCCCCcCHHHHHHHHHHH-HHHHh---CCHHHHHHHHHHHHHHHHHHHHHhCCCeEE-EEEE-EE
Confidence 22221 1 22333333332333333 21111 12345555556666655544 333322 3344 55
Q ss_pred EEEEecCCCcccccccccc---cCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEee--cCHHHHHHHHHHHHHHH
Q 047983 152 FVMYCGSEDKCLLKLNYSL---LEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFA--VEPSAFEIGLGRMKAFY 226 (233)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~--~~~~~l~~~~~~l~~~l 226 (233)
|+| +.++... .+.. .....+.+.|.++||.+.||..|+.++++|+++. .+++++++++++|.+++
T Consensus 360 ~~~---------i~~~~~~~~~~~~~-~~~~~~~~~l~~~Gv~v~~~~~~~~~~~lRi~~~~~~t~~~i~~~l~~l~~~l 429 (433)
T 1zod_A 360 LLG---------VEIVKDRRTKEPAD-GLGAKITRECMNLGLSMNIVQLPGMGGVFRIAPPLTVSEDEIDLGLSLLGQAI 429 (433)
T ss_dssp EEE---------EEEEEETTTTEECT-THHHHHHHHHHHTTEECCEECCTTSCCEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred EEE---------EEEecCccccCCCh-HHHHHHHHHHHHCCCeEeccCCCCCCCEEEEECCcCCCHHHHHHHHHHHHHHH
Confidence 667 3332100 0000 1233344445578999999988766689999765 48999999999999988
Q ss_pred HHH
Q 047983 227 YRH 229 (233)
Q Consensus 227 ~~~ 229 (233)
++.
T Consensus 430 ~~~ 432 (433)
T 1zod_A 430 ERA 432 (433)
T ss_dssp HHH
T ss_pred HHh
Confidence 754
No 104
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.72 E-value=4.3e-16 Score=134.28 Aligned_cols=203 Identities=11% Similarity=-0.002 Sum_probs=126.0
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccc-cCCCCceEEEEEecCCCccccccchhh-
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKR-WIVPGWRLGWLVTSDPNGILQDLGVAF- 78 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~-~~~~G~R~G~~~~~~~~~~~~~~~~~~- 78 (233)
++|+++|++||+++|+||++.. +..+.. +...+..+++.|+||. ++.+|+ ||+++++ ++++.+.-.+
T Consensus 164 ~~i~~~~~~~~~~li~D~a~~~----~~~~~~---~~~~~~d~~~~s~sK~l~g~~G~--G~~~~~~--~~~~~~~~~~~ 232 (393)
T 2huf_A 164 EGVGALCHQHNCLLIVDTVASL----GGAPMF---MDRWEIDAMYTGSQKVLGAPPGI--TPVSFSH--RAVERYKRRNT 232 (393)
T ss_dssp TTHHHHHHHTTCEEEEECTTTB----TTBCCC---TTTTTCSEEECCSSSTTCCCSSC--EEEEECH--HHHHHHHTCSS
T ss_pred HHHHHHHHHcCCEEEEEccccc----CCCCcc---hhhcCccEEEECCCcccccCCCe--EEEEECH--HHHHHHhhcCC
Confidence 4799999999999999999864 111112 2233466889999996 567887 9999976 4443210000
Q ss_pred -hhh-hhhHHhhhhhh------hhcc-CcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCC
Q 047983 79 -FHS-ISLNMRMDDYL------LLSE-SVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPE 148 (233)
Q Consensus 79 -~~~-~~~~~~~~~~~------~~~~-~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~ 148 (233)
... .........+. .... +.+... .++...++......+++.++.++++++++.+.|+++ ++.. ..|.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~~ 310 (393)
T 2huf_A 233 KVKVYYWDMSLVGDYWGCFGRPRIYHHTISSTLLYGLREAIAMACEEGLPALIARHEDCAKRLYRGLQDA-GFEL-YADP 310 (393)
T ss_dssp CCSCGGGCHHHHHHHTTCSSSCCCCSCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCB-SSCG
T ss_pred CCceEEEchHHHHhhhccccccCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHc-CCee-ccCc
Confidence 000 00000000000 0111 122222 333333322222247788899999999999999887 5554 3442
Q ss_pred ---ccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEe-e--cCHHHHHHHHHHH
Q 047983 149 ---GSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITF-A--VEPSAFEIGLGRM 222 (233)
Q Consensus 149 ---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~-~--~~~~~l~~~~~~l 222 (233)
+++++| ++++. +. +..++..++++++||.+.||..|...+++|+++ + .+++++++++++|
T Consensus 311 ~~~~~~~~~---------~~~~~----~~-~~~~~~~~L~~~~gi~v~~g~~~~~~~~~Ri~~~~~~~~~e~i~~~~~~l 376 (393)
T 2huf_A 311 KDRLSTVTT---------IKVPQ----GV-DWLKAAQYAMKTYLVEISGGLGPTAGQVFRIGLMGQNATTERVDRVLQVF 376 (393)
T ss_dssp GGBCTTEEE---------EECCT----TC-CHHHHHHHHHHHHCEECBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHH
T ss_pred cccCCcEEE---------EEcCC----CC-CHHHHHHHHHHhCCEEEecCcccccCCEEEEEcccCcCCHHHHHHHHHHH
Confidence 355777 44431 11 355566566656799999999887789999999 5 3688899999999
Q ss_pred HHHHHHHh
Q 047983 223 KAFYYRHA 230 (233)
Q Consensus 223 ~~~l~~~~ 230 (233)
.+++++..
T Consensus 377 ~~~~~~~~ 384 (393)
T 2huf_A 377 QEAVAAVK 384 (393)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHcC
Confidence 99998764
No 105
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=99.72 E-value=1.4e-16 Score=138.37 Aligned_cols=201 Identities=12% Similarity=0.105 Sum_probs=125.9
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|+++|++||++||+||+|+.... ...+.. .+..+++.|+||.++.+| +||+++++ ++++.+.-...+
T Consensus 189 ~~i~~l~~~~~~~li~D~a~~~~~~----~~~~~~---~~~di~~~s~sK~~~~~g--~G~~~~~~--~~~~~~~~~~~~ 257 (420)
T 1t3i_A 189 EEIAQLAHQAGAKVLVDACQSAPHY----PLDVQL---IDCDWLVASGHKMCAPTG--IGFLYGKE--EILEAMPPFFGG 257 (420)
T ss_dssp HHHHHHHHHTTCEEEEECTTTTTTS----CCCHHH---HTCSEEEEEGGGTTSCTT--CEEEEECH--HHHHHSCCCSCS
T ss_pred HHHHHHHHHcCCEEEEEhhhccCCc----cCchhh---cCCCEEEEehhhhcCCCc--eEEEEEch--HHHhhcCceecC
Confidence 3789999999999999999996432 112222 235689999999988888 99999987 444321110000
Q ss_pred hhh-----hH-Hhh-hhhhhhccCcchH--HHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCC---
Q 047983 81 SIS-----LN-MRM-DDYLLLSESVYTT--VGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPE--- 148 (233)
Q Consensus 81 ~~~-----~~-~~~-~~~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~--- 148 (233)
... .. ..+ .....+..+.++. ..++...++...+..+++.++.++++++.+.+.|++++++.. ..|.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~-~~~~~~~ 336 (420)
T 1t3i_A 258 GEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENIHNYEVELTHYLWQGLGQIPQLRL-YGPNPKH 336 (420)
T ss_dssp TTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTCTTEEE-ESCCGGG
T ss_pred CCccccccccccCCCCchhhccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhCCCeEE-eCCCccc
Confidence 000 00 000 0000111122222 233332222122234678889999999999999998877664 3443
Q ss_pred ---ccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCccc--------CCCCcEEEEeec--CHHHH
Q 047983 149 ---GSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITV--------GLKDWLRITFAV--EPSAF 215 (233)
Q Consensus 149 ---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f--------~~~~~~Rl~~~~--~~~~l 215 (233)
++++.| .++ . . +...+.+.|.++||.+.||..| +..+++|+++.. +++++
T Consensus 337 ~~~~~~~~~----------~~~--~---~--~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~g~~~~iRis~~~~~~~~~i 399 (420)
T 1t3i_A 337 GDRAALASF----------NVA--G---L--HASDVATMVDQDGIAIRSGHHCTQPLHRLFDASGSARASLYFYNTKEEI 399 (420)
T ss_dssp SCBCSEEEE----------EET--T---B--CHHHHHHHHHTTTEECBCSCTTCHHHHHHTTCCCCEEEECCTTCCHHHH
T ss_pred cccCCEEEE----------EEC--C---C--CHHHHHHHHHHCCeEEeeccccchHHHHhcCCCCeEEEecCCCCCHHHH
Confidence 566655 232 1 1 3344556778889999999543 436899999996 89999
Q ss_pred HHHHHHHHHHHHHHh
Q 047983 216 EIGLGRMKAFYYRHA 230 (233)
Q Consensus 216 ~~~~~~l~~~l~~~~ 230 (233)
+++++.|.+++++.+
T Consensus 400 ~~~~~~l~~~~~~~~ 414 (420)
T 1t3i_A 400 DLFLQSLQATIRFFS 414 (420)
T ss_dssp HHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999887654
No 106
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.72 E-value=5.8e-17 Score=141.77 Aligned_cols=179 Identities=14% Similarity=0.130 Sum_probs=115.3
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCC-ceEEEEEecCCCccccccchhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
+|+++|++||++||+||+|.+|.+.+.. ..+...+...+++ ||||.|+. | +|+||+++++ +++ .+ .
T Consensus 237 ~l~~l~~~~~~~li~DE~~~~~g~~g~~-~~~~~~~~~~d~~---t~sK~~~~-G~~riG~~~~~~--~~~-~~--~--- 303 (419)
T 2eo5_A 237 ELQKLAKKYGILLVDDEVQMGLGRTGKL-FAIENFNTVPDVI---TLAKALGG-GIMPIGATIFRK--DLD-FK--P--- 303 (419)
T ss_dssp HHHHHHHHHTCEEEEECTTTTTTTTSSS-SGGGGGTCCCSEE---EECGGGGT-TTSCCEEEEEEG--GGC-CC------
T ss_pred HHHHHHHHcCCEEEEeccccCCccCcch-hhHHhcCCCCCEE---EecccccC-CccceEEEEEch--Hhh-cC--C---
Confidence 6899999999999999999998766532 1222222233333 89999885 9 9999999987 333 21 1
Q ss_pred hhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCCC
Q 047983 81 SISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSED 160 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~ 160 (233)
. ....+++.++..+.++.+.+ +. . ++.++.++++++++.+.|+++ +.. ..+. |.|+|
T Consensus 304 -----~--~~~~t~~~n~~~~~aa~aal-~~-~----~~~~~~~~~~~~~l~~~L~~~--~~~-~~~~-g~~~~------ 360 (419)
T 2eo5_A 304 -----G--MHSNTFGGNALACAIGSKVI-DI-V----KDLLPHVNEIGKIFAEELQGL--ADD-VRGI-GLAWG------ 360 (419)
T ss_dssp ------------CCCCCHHHHHHHHHHH-HH-H----HHHHHHHHHHHHHHHHHHTTS--SSE-EEEE-TTEEE------
T ss_pred -----c--ccCCCCCCCHHHHHHHHHHH-HH-H----HHHHHHHHHHHHHHHHHHHHh--hhh-eEee-eEEEE------
Confidence 1 11122333333332344443 21 1 127888999999999999876 222 3344 56667
Q ss_pred cccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEee--cCHHHHHHHHHHHHHHHHHH
Q 047983 161 KCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFA--VEPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~--~~~~~l~~~~~~l~~~l~~~ 229 (233)
+.+. +. . .... +.+.|.++||.+.|++ .+++|++++ .+++++++++++|.+++++.
T Consensus 361 ---i~~~-~~--~--~~~~-~~~~l~~~Gv~v~~~~----~~~lRis~~~~~t~e~i~~~l~~l~~~l~~~ 418 (419)
T 2eo5_A 361 ---LEYN-EK--K--VRDR-IIGESFKRGLLLLPAG----RSAIRVIPPLVISEEEAKQGLDILKKVIKVV 418 (419)
T ss_dssp ---EECS-CH--H--HHHH-HHHHHHHTTEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred ---EEEe-cC--c--cHHH-HHHHHHHCCCEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 4441 10 0 1233 4444558899999964 579999765 48999999999999988753
No 107
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.71 E-value=7.2e-17 Score=139.72 Aligned_cols=190 Identities=12% Similarity=0.061 Sum_probs=124.9
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccC-CCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWI-VPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|.++|++||+++|+||+|+....+... .+ ..+...+ +++.|+||.++ .+| ||+++++ +++
T Consensus 181 ~~i~~l~~~~~~~li~Dea~~~g~~~~~~-~~-~~~~~~d--i~~~s~sK~~~g~~g---G~~~~~~--~~~-------- 243 (405)
T 2vi8_A 181 AKFREIADEVGAYLMVDMAHIAGLVAAGL-HP-NPVPYAH--FVTTTTHKTLRGPRG---GMILCQE--QFA-------- 243 (405)
T ss_dssp HHHHHHHHHHTCEEEEECTTTHHHHHTTS-SC-CSTTTCS--EEEEESSSTTCCCSC---EEEEECH--HHH--------
T ss_pred HHHHHHHHHcCCEEEEEccccccccccCc-CC-CccccCC--EEEEeccccCCCCCC---eEEEEcH--HHH--------
Confidence 37899999999999999999953332211 11 1121212 88999999987 677 9999986 343
Q ss_pred hhhhhHHhhhhhh-hhccCc-ch-HHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCC-CccEEEEE
Q 047983 80 HSISLNMRMDDYL-LLSESV-YT-TVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKP-EGSMFVMY 155 (233)
Q Consensus 80 ~~~~~~~~~~~~~-~~~~~~-~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~g~~~~~ 155 (233)
..+.... ....+. +. +..++...++.....++++.++.++++++++.+.|+++ ++.. ..| .+++++|
T Consensus 244 ------~~l~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~~~~~~~~~- 314 (405)
T 2vi8_A 244 ------KQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNE-GFTL-VSGGTDNHLLL- 314 (405)
T ss_dssp ------HHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCEE-GGGSCSSSEEE-
T ss_pred ------HHHHhhhcccccCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC-CCeE-ecCCCCceEEE-
Confidence 2222211 111222 22 22343333322223577889999999999999999887 5554 333 4688888
Q ss_pred ecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcc----cCC--CCcEEEEeec------CHHHHHHHHHHHH
Q 047983 156 CGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGIT----VGL--KDWLRITFAV------EPSAFEIGLGRMK 223 (233)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~----f~~--~~~~Rl~~~~------~~~~l~~~~~~l~ 223 (233)
+.++.. +. +...+.+.|.++||.+.||+. ++. .+++|++++. +++++++++++|.
T Consensus 315 --------~~~~~~---~~--~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~ 381 (405)
T 2vi8_A 315 --------VDLRPQ---QL--TGKTAEKVLDEVGITVNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGLEEMDEIAAIIG 381 (405)
T ss_dssp --------EECGGG---TC--CHHHHHHHHHHHTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHH
T ss_pred --------EEccCC---CC--CHHHHHHHHHHcCceeccCcCccccCCCCCCCceEEeeeeeeecCCCHHHHHHHHHHHH
Confidence 554321 11 344455667788999999862 332 5789999984 7999999999999
Q ss_pred HHHHHH
Q 047983 224 AFYYRH 229 (233)
Q Consensus 224 ~~l~~~ 229 (233)
+++++.
T Consensus 382 ~~~~~~ 387 (405)
T 2vi8_A 382 LVLKNV 387 (405)
T ss_dssp HHHTCT
T ss_pred HHHhcc
Confidence 988654
No 108
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.71 E-value=6.3e-16 Score=132.90 Aligned_cols=205 Identities=12% Similarity=0.033 Sum_probs=126.0
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCcccc-CCCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRW-IVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|.++|++||++||+||+|+... .... ....+..+++.|+||.+ +.+| +||+++++ ++++.+.-...
T Consensus 168 ~~i~~l~~~~~~~li~De~~~~g~----~~~~---~~~~~~d~~~~s~sK~~~~~~g--~g~~~~~~--~~~~~~~~~~~ 236 (393)
T 3kgw_A 168 DGFGELCHRYQCLLLVDSVASLGG----VPIY---MDQQGIDIMYSSSQKVLNAPPG--ISLISFND--KAKYKVYSRKT 236 (393)
T ss_dssp TTHHHHHHHTTCEEEEECTTTTTT----SCCC---TTTTTCCEEEEESSSTTCCCSS--CEEEEECH--HHHHHHHTCSS
T ss_pred HHHHHHHHHcCCEEEEECCccccC----cccc---hhhcCCCEEEecCcccccCCCc--eeEEEECH--HHHHHHhccCC
Confidence 579999999999999999988421 1111 22234458888999965 4444 89999987 44432100000
Q ss_pred hhhhh--H-Hhhhhhh------hh-ccCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCC
Q 047983 80 HSISL--N-MRMDDYL------LL-SESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPE 148 (233)
Q Consensus 80 ~~~~~--~-~~~~~~~------~~-~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~ 148 (233)
..... . .....+. .. ..+.+... .++...+....+..+++.++.++++++++.+.|+++ ++.. ..+.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~~ 314 (393)
T 3kgw_A 237 KPVSFYTDITYLAKLWGCEGETRVIHHTTPVTSLYCLRESLALIAEQGLENCWRRHREATAHLHKHLQEM-GLKF-FVKD 314 (393)
T ss_dssp CCSCSTTCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCB-SSSS
T ss_pred CCCceeecHHHHHHhhhhccccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCee-ccCC
Confidence 00000 0 0000000 00 11122222 333333322233457889999999999999999887 5543 3232
Q ss_pred ----ccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEe-ec--CHHHHHHHHHH
Q 047983 149 ----GSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITF-AV--EPSAFEIGLGR 221 (233)
Q Consensus 149 ----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~-~~--~~~~l~~~~~~ 221 (233)
+++++| +.++.. . +..++..++++++||.+.||..+...+++|+++ +. +++++++++++
T Consensus 315 ~~~~~~~~~~---------~~~~~~----~-~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~ 380 (393)
T 3kgw_A 315 PEIRLPTITT---------VTVPAG----Y-NWRDIVSYVLDHFSIEISGGLGPTEERVLRIGLLGYNATTENVDRVAEA 380 (393)
T ss_dssp GGGBCSSEEE---------EECCTT----B-CHHHHHHHHHHHHCEECBCCCGGGTTTEEEEECCGGGCCHHHHHHHHHH
T ss_pred hhhcCCeEEE---------EeCCCC----C-CHHHHHHHHHHhCCEEEeCCcccCCCCEEEEEecccCCCHHHHHHHHHH
Confidence 356666 444321 1 355566666655599999998777789999998 63 89999999999
Q ss_pred HHHHHHHHhhc
Q 047983 222 MKAFYYRHAKK 232 (233)
Q Consensus 222 l~~~l~~~~~~ 232 (233)
|.+++++..++
T Consensus 381 l~~~l~~~~~~ 391 (393)
T 3kgw_A 381 LREALQHCPKN 391 (393)
T ss_dssp HHHHHHHSCBC
T ss_pred HHHHHHhhhhc
Confidence 99999887543
No 109
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.71 E-value=2.5e-17 Score=144.55 Aligned_cols=202 Identities=12% Similarity=0.031 Sum_probs=110.0
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHS 81 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~ 81 (233)
+|.++|++||++||+||+|.+| ..+... .....+.... +.|+||.++ +|+|+||+++++ ++++.+.-.
T Consensus 227 ~l~~l~~~~~illI~DEv~~g~-~~g~~~-~~~~~~~~~d---i~t~sK~~~-~G~~iG~~~~~~--~i~~~~~~~---- 294 (434)
T 3l44_A 227 KVNELVHEAGALVIYDEVITAF-RFMYGG-AQDLLGVTPD---LTALGKVIG-GGLPIGAYGGKK--EIMEQVAPL---- 294 (434)
T ss_dssp HHHHHHHTTTCEEEEECTTTTT-TSSSSC-HHHHHTCCCS---EEEEEGGGG-TTSSCEEEEECH--HHHTTBTTT----
T ss_pred HHHHHHHHcCCEEEEeccccce-eccccH-HHHHcCCCCC---eeehhhhhc-CCcCeeeEEEcH--HHHHhhccC----
Confidence 6899999999999999999998 554321 1111222122 458999987 799999999887 454321000
Q ss_pred hhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhh----cCCCcccccCCCccEEEEEec
Q 047983 82 ISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLK----EIPCITCPKKPEGSMFVMYCG 157 (233)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~----~~~~~~~~~~~~~g~~~~~~~ 157 (233)
.......+++.++..++++.+.+ +...+ ++..+.++++++.+.+.|+ .++.... ..+.|.++.+.+.
T Consensus 295 ----~~~~~~~t~~~~~~a~aaa~aal-~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~~~g~~~~~~~~ 365 (434)
T 3l44_A 295 ----GPAYQAGTMAGNPASMASGIACL-EVLQQ---EGLYEKLDELGATLEKGILEQAAKHNIDIT-LNRLKGALTVYFT 365 (434)
T ss_dssp ----SSBCCCCTTTTCHHHHHHHHHHH-HHHTS---TTHHHHHHHHHHHHHHHHHHHHHHTTCCEE-EEEETTEEEEEES
T ss_pred ----CCcccCCCCCcCHHHHHHHHHHH-HHHHc---ccHHHHHHHHHHHHHHHHHHHHHhCCCCEE-EEeeccEEEEEEe
Confidence 00111122333333333444443 21111 2233333444444444443 3333222 3344444444111
Q ss_pred CCCccccc-ccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeecCHHHHHHHHHHHHHHHHHHhhc
Q 047983 158 SEDKCLLK-LNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAVEPSAFEIGLGRMKAFYYRHAKK 232 (233)
Q Consensus 158 ~~~~~~~~-~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~~~~~l~~~~~~l~~~l~~~~~~ 232 (233)
+++..... ...+ .. .....+.+.|.++||.+.|+. .+++|+++..+++++++++++|.+++++..++
T Consensus 366 ~~~~~~~~~~~~~---~~-~~~~~~~~~l~~~Gv~v~~~~----~~~~rl~~~~t~e~i~~~l~~l~~~l~~~~~~ 433 (434)
T 3l44_A 366 TNTIEDYDAAQDT---DG-EMFGKFFKLMLQEGVNLAPSK----YEAWFLTTEHTKEDIEYTIEAVGRAFAALADN 433 (434)
T ss_dssp SSCCCSHHHHHHS---CH-HHHHHHHHHHHHTTEECCSST----TCCEECCTTCCHHHHHHHHHHHHHHHHHHHHC
T ss_pred cCcccchhhcccc---CH-HHHHHHHHHHHHCCeEEeecC----CCcEEEecccCHHHHHHHHHHHHHHHHHHHhc
Confidence 11000000 0000 00 022445555667899999975 25789987779999999999999999887654
No 110
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.71 E-value=4.7e-17 Score=141.04 Aligned_cols=192 Identities=15% Similarity=0.140 Sum_probs=118.1
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|+++|++||++||+||+|+++.+.+... .+...+...+++ |+||.++ +|+|+||+++++ ++++.+
T Consensus 207 ~~l~~l~~~~~~~li~De~~~~~~~~g~~~-~~~~~~~~~d~~---t~sK~~~-~G~r~G~~~~~~--~~~~~~------ 273 (406)
T 4adb_A 207 QGLRELCNRHNALLIFDEVQTGVGRTGELY-AYMHYGVTPDLL---TTAKALG-GGFPVGALLATE--ECARVM------ 273 (406)
T ss_dssp HHHHHHHHHTTCEEEEECTTTTTTTTSSSS-HHHHHTCCCSEE---EECGGGG-TTSCCEEEEECH--HHHHTC------
T ss_pred HHHHHHHHHcCCEEEEeccccCCCccchhH-HHHhcCCCCCEE---Eechhhc-CCCCeEEEEEcH--HHHhhh------
Confidence 378999999999999999999887766432 222233334444 6799988 899999999987 344211
Q ss_pred hhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCC-cccc-cCCCccEEEEEecC
Q 047983 81 SISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPC-ITCP-KKPEGSMFVMYCGS 158 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~-~~~~-~~~~~g~~~~~~~~ 158 (233)
.......+++.++..+.++.+.+ +.... .+.++.++++++++.+.|+++.. ...+ ..+..|.++|
T Consensus 274 -----~~~~~~~~~~~~~~~~~a~~~~l-~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~---- 340 (406)
T 4adb_A 274 -----TVGTHGTTYGGNPLASAVAGKVL-ELINT---PEMLNGVKQRHDWFVERLNTINHRYGLFSEVRGLGLLIG---- 340 (406)
T ss_dssp -----CTTSSCCSSTTCHHHHHHHHHHH-HHHSS---HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEETTEEE----
T ss_pred -----ccCCcCCCCCCCHHHHHHHHHHH-HHHHh---cCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEEEEEEE----
Confidence 11111122333333332333332 21111 46667777778888777766311 1101 1122466777
Q ss_pred CCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEee--cCHHHHHHHHHHHHHHHHHHhh
Q 047983 159 EDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFA--VEPSAFEIGLGRMKAFYYRHAK 231 (233)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~--~~~~~l~~~~~~l~~~l~~~~~ 231 (233)
+.++... . .+..++. +.|.++||.+.|++ .+++|+++. .+++++++++++|.+++++...
T Consensus 341 -----~~~~~~~--~-~~~~~~~-~~l~~~gi~v~~~~----~~~iRi~~~~~~~~e~i~~~~~~l~~~l~~~~~ 402 (406)
T 4adb_A 341 -----CVLNADY--A-GQAKQIS-QEAAKAGVMVLIAG----GNVVRFAPALNVSEEEVTTGLDRFAAACEHFVS 402 (406)
T ss_dssp -----EEECTTT--T-TCHHHHH-HHHHHTTEECEESS----TTEEEECCCTTCCHHHHHHHHHHHHHHHHHHHC
T ss_pred -----EEEeCCc--H-HHHHHHH-HHHHHCCcEEeecC----CCeEEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 4443210 0 1244444 44556699999865 589999544 5899999999999999987754
No 111
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.71 E-value=1.7e-17 Score=143.81 Aligned_cols=184 Identities=14% Similarity=0.179 Sum_probs=114.8
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|+++|++||++||+||+|+++.+.+. +.++..++...+++ |+||.++ +|+|+||+++++ .++ .+
T Consensus 207 ~~l~~l~~~~~~~li~De~~~~~~~~g~-~~~~~~~~~~~d~~---s~sK~~~-~G~r~G~~~~~~--~~~-~l------ 272 (397)
T 2ord_A 207 EEARKLCDEYDALLVFDEVQCGMGRTGK-LFAYQKYGVVPDVL---TTAKGLG-GGVPIGAVIVNE--RAN-VL------ 272 (397)
T ss_dssp HHHHHHHHHHTCEEEEECTTTTTTTTSS-SSHHHHHTCCCSEE---EECGGGG-TTSCCEEEEECS--TTC-CC------
T ss_pred HHHHHHHHHcCCEEEEEecccCCccCcc-chhhhhhCCCCCee---eeccccC-CCcCeEEEEEch--Hhc-cc------
Confidence 3689999999999999999998776653 22233333222333 8899988 899999999987 333 22
Q ss_pred hhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCC-Cccc--ccCCCccEEEEEec
Q 047983 81 SISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIP-CITC--PKKPEGSMFVMYCG 157 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~--~~~~~~g~~~~~~~ 157 (233)
.......+++.++..+..+.+. ++.. .+ ++.++.++++++.+.+.|++++ ++.. ...+ .|.|+|
T Consensus 273 -----~~~~~~~~~~~~~~~~~a~~~~-l~~~-~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~-~g~~~~--- 339 (397)
T 2ord_A 273 -----EPGDHGTTFGGNPLACRAGVTV-IKEL-TK--EGFLEEVEEKGNYLMKKLQEMKEEYDVVADVRG-MGLMIG--- 339 (397)
T ss_dssp -----CTTSSCCSSTTCHHHHHHHHHH-HHHH-TS--TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEE-ETTEEE---
T ss_pred -----CCCCcCCCCCCCHHHHHHHHHH-HHHH-Hh--CCHHHHHHHHHHHHHHHHHHHHHhCCceEEEEE-EeEEEE---
Confidence 1111112223333333233333 3221 11 4567788888888888886642 1111 1233 356677
Q ss_pred CCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEee--cCHHHHHHHHHHHHHHHH
Q 047983 158 SEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFA--VEPSAFEIGLGRMKAFYY 227 (233)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~--~~~~~l~~~~~~l~~~l~ 227 (233)
+.++.. . +..++... |.++||.+.||. .+++|+++. .+++++++++++|.++++
T Consensus 340 ------~~~~~~----~-~~~~l~~~-l~~~gi~v~~~~----~~~iRis~~~~~~~e~i~~~~~~l~~~l~ 395 (397)
T 2ord_A 340 ------IQFREE----V-SNREVATK-CFENKLLVVPAG----NNTIRFLPPLTVEYGEIDLAVETLKKVLQ 395 (397)
T ss_dssp ------EEECTT----S-CHHHHHHH-HHHTTEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred ------EEECCh----H-HHHHHHHH-HHHCCCEEccCC----CCEEEEECCcCCCHHHHHHHHHHHHHHHh
Confidence 444321 1 24445544 456899999973 579999965 489999999999998875
No 112
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.70 E-value=3.2e-16 Score=132.73 Aligned_cols=200 Identities=14% Similarity=-0.005 Sum_probs=120.2
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccc-cCCCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKR-WIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~-~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|.++|++||++||+||+|+.. ..+.++..+ +..+++.|++|. ++.+| +||+++++ ++++.+.....
T Consensus 144 ~~i~~l~~~~~~~li~D~a~~~~----~~~~~~~~~---~~d~~~~s~~K~~~~~~g--~G~~~~~~--~~~~~l~~~~~ 212 (353)
T 2yrr_A 144 EAIGALAKEAGALFFLDAVTTLG----MLPFSMRAM---GVDYAFTGSQKCLSAPPG--LAPIAASL--EARKAFTGKRG 212 (353)
T ss_dssp HHHHHHHHHHTCEEEEECTTTTT----TSCCCHHHH---TCSEEECCTTSTTCCCSS--CEEEEECH--HHHHHCCCCSC
T ss_pred HHHHHHHHHcCCeEEEEcCcccc----ccccccccc---CceEEEecCcccccCCCc--eEEEEECH--HHHHHhccCCC
Confidence 37899999999999999999632 112223222 234778899995 45567 69999987 44432110000
Q ss_pred hhhhh--HHhhhhhhhhccCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCC--ccEEEE
Q 047983 80 HSISL--NMRMDDYLLLSESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPE--GSMFVM 154 (233)
Q Consensus 80 ~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~--~g~~~~ 154 (233)
...+. ............+++... .++...++...+..+++.++.++++++++.+.|+++ ++.. ..+. +++++|
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~~~~~~~~~~ 290 (353)
T 2yrr_A 213 WYLDLARVAEHWERGGYHHTTPVLLHYALLEALDLVLEEGVAARERRAREVYAWVLEELKAR-GFRP-YPKASPLPTVLV 290 (353)
T ss_dssp STTCHHHHHHHHTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCEE-SCSSSBCTTEEE
T ss_pred ccccHHHHhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHC-CCcc-ccCccCCCeEEE
Confidence 00000 000000011111222222 333333322112237788999999999999999887 6554 3343 677777
Q ss_pred EecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEee--cCHHHHH-HHHHHHHHHHHH
Q 047983 155 YCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFA--VEPSAFE-IGLGRMKAFYYR 228 (233)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~--~~~~~l~-~~~~~l~~~l~~ 228 (233)
++++. +. +..++. +.|.++||.+.||..|...+++|+++. .++++++ +++++|.+++++
T Consensus 291 ---------~~~~~----~~-~~~~~~-~~l~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~~~l~~~l~~ 352 (353)
T 2yrr_A 291 ---------VRPPE----GV-DADRLV-RALYAEGVAVAGGIGPTRGQVLRLGLMGEGARREAYQAFLKALDRALAL 352 (353)
T ss_dssp ---------EECCT----TC-CHHHHH-HHHHHTTEECEECCGGGTTTCEEEECSGGGSCHHHHHHHHHHHHHHHHC
T ss_pred ---------EECCC----CC-CHHHHH-HHHHHCCEEEeCCccccCCCeEEEecCccCCHHHHHHHHHHHHHHHHhh
Confidence 54431 12 244444 455566999999998877889999994 3677778 999999988753
No 113
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.70 E-value=2.2e-16 Score=137.44 Aligned_cols=192 Identities=13% Similarity=0.104 Sum_probs=122.7
Q ss_pred ChHHHHHHHcCcEEEEccccC-ccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYG-HLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~-~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|+++|++||++||+||+|. ++.+.+..+.++.. . + +++.|+||.+ +|.|.||++++++ .+.
T Consensus 190 ~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~~~--~-d--i~~~s~sK~l--~g~~~g~~~~~~~-~~~-------- 253 (425)
T 3ecd_A 190 ARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPVEH--A-H--VVTSTTHKTL--RGPRGGFVLTNDE-EIA-------- 253 (425)
T ss_dssp HHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGT--C-S--EEEEESSGGG--CCCSCEEEEESCH-HHH--------
T ss_pred HHHHHHHHHcCCEEEEECcChHhhhhcccccCchhc--C-c--EEEecCCccc--CCCCcEEEEeCCH-HHH--------
Confidence 378999999999999999954 44444433222221 1 2 8899999986 6789999999862 122
Q ss_pred hhhhhHHhhhhhhh--hccCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEe
Q 047983 80 HSISLNMRMDDYLL--LSESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYC 156 (233)
Q Consensus 80 ~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~ 156 (233)
..+..... ...+++.+. .+++..+.....+++++.++.++++++++.+.|++. ++....++.+++++|
T Consensus 254 ------~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~-- 324 (425)
T 3ecd_A 254 ------KKINSAVFPGLQGGPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQALGDVLKAG-GVDLVTGGTDNHLLL-- 324 (425)
T ss_dssp ------HHHHHHHC-----CCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEE--
T ss_pred ------HHHHhhhCccccCCccHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhC-CCeeccCCCCceEEE--
Confidence 22222111 111223322 222222212223567788899999999999999885 454323335677888
Q ss_pred cCCCcccccccccccCCCCChHHHHHHHHhccCEEEE----CCcccCC--CCcEEEEeec------CHHHHHHHHHHHHH
Q 047983 157 GSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVL----PGITVGL--KDWLRITFAV------EPSAFEIGLGRMKA 224 (233)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~----pg~~f~~--~~~~Rl~~~~------~~~~l~~~~~~l~~ 224 (233)
+.++.. + .+.+.+.+.|+++||.+. ||..+.. .+++|+++.. ++++++++++.|.+
T Consensus 325 -------~~~~~~---~--~~~~~~~~~l~~~gi~v~~~~~p~~~~~~~~~~~iRi~~~~~~~~~~~~e~i~~~~~~l~~ 392 (425)
T 3ecd_A 325 -------VDLRPK---G--LKGAQVEQALERAGITCNKNGIPFDPEKPTITSGIRLGTPAGTTRGFGAAEFREVGRLILE 392 (425)
T ss_dssp -------EECGGG---T--CCHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEESHHHHHTTCCHHHHHHHHHHHHH
T ss_pred -------EEeCCC---C--CCHHHHHHHHHHcCCEecccccCCCCCCCCCccceeccchhheeccCCHHHHHHHHHHHHH
Confidence 444321 1 256777788888999999 5543332 4689998552 37899999999998
Q ss_pred HHHHH
Q 047983 225 FYYRH 229 (233)
Q Consensus 225 ~l~~~ 229 (233)
++++.
T Consensus 393 ~l~~~ 397 (425)
T 3ecd_A 393 VFEAL 397 (425)
T ss_dssp HHHHH
T ss_pred HHhcc
Confidence 88765
No 114
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.70 E-value=6.9e-17 Score=138.58 Aligned_cols=177 Identities=15% Similarity=0.179 Sum_probs=114.0
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|+++|++||+++|+||+|.++...+.. .++..++...+++ |+||.++ +|+|+||+++++ ++++.+ .
T Consensus 196 ~~i~~~~~~~~~~li~De~~~~~~~~~~~-~~~~~~~~~~d~~---s~SK~~~-~g~~~G~~~~~~--~~~~~~--~--- 263 (375)
T 2eh6_A 196 SKLQEICKEKDVLLIIDEVQTGIGRTGEF-YAYQHFNLKPDVI---ALAKGLG-GGVPIGAILARE--EVAQSF--T--- 263 (375)
T ss_dssp HHHHHHHHHHTCEEEEECTTTTTTTTSSS-SGGGGGTCCCSEE---EECGGGG-TTSCCEEEEEEH--HHHTTC--C---
T ss_pred HHHHHHHHHhCCEEEEeccccCCCCCCcc-hhhhhcCCCCCEE---EEccccc-CCCCeEEEEEcH--HHHhhh--c---
Confidence 37899999999999999999987554422 2333333223333 8889988 699999999987 444321 1
Q ss_pred hhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCCC
Q 047983 81 SISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSED 160 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~ 160 (233)
......+++.++..+..+.+. ++. . .+.++.++++++++.+.|++++.. ..+..|+++|
T Consensus 264 ------~~~~~~~~~~~~~~~~~~~~~-l~~-~----~~~~~~~~~~~~~l~~~L~~~~~~---~~~~~g~~~~------ 322 (375)
T 2eh6_A 264 ------PGSHGSTFGGNPLACRAGTVV-VDE-V----EKLLPHVREVGNYFKEKLKELGKG---KVKGRGLMLG------ 322 (375)
T ss_dssp ------TTSCCCSSTTCHHHHHHHHHH-HHH-H----HHHHHHHHHHHHHHHHHHHHTTSS---EEEEETTEEE------
T ss_pred ------CCCCCCCCCCCHHHHHHHHHH-HHH-H----HHHHHHHHHHHHHHHHHHHHHhcC---CceEEEEEEE------
Confidence 100111222222222133332 221 1 167788889999999999887542 2244577888
Q ss_pred cccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEee--cCHHHHHHHHHHHHHH
Q 047983 161 KCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFA--VEPSAFEIGLGRMKAF 225 (233)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~--~~~~~l~~~~~~l~~~ 225 (233)
+.++ . +..++...+ .++||.+.|+. .+++|+++. .+++++++++++|.++
T Consensus 323 ---~~~~--~-----~~~~~~~~l-~~~gi~~~~~~----~~~iRi~~~~~~~~~~i~~~~~~l~~~ 374 (375)
T 2eh6_A 323 ---LELE--R-----ECKDYVLKA-LEKGLLINCTA----GKVLRFLPPLIIQKEHIDRAISVLREI 374 (375)
T ss_dssp ---EECS--S-----CCHHHHHHH-HHTTEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred ---EEEc--C-----cHHHHHHHH-HHCCCEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHHh
Confidence 4443 1 244555554 46899999863 589999976 3899999999999875
No 115
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.69 E-value=6.5e-17 Score=141.67 Aligned_cols=187 Identities=13% Similarity=0.124 Sum_probs=114.4
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHS 81 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~ 81 (233)
+|+++|++||++||+||+|.++.+++... .+...+...+++ |+||.++ +|+|+||+++++ ++++. +
T Consensus 226 ~l~~l~~~~gi~lI~Dev~~g~~~~g~~~-~~~~~~~~~dii---t~sK~l~-~G~~iG~~~~~~--~l~~~--l----- 291 (420)
T 2pb2_A 226 GLRDLCDEHQALLVFDEVQCGMGRTGDLF-AYMHYGVTPDIL---TSAKALG-GGFPVSAMLTTQ--EIASA--F----- 291 (420)
T ss_dssp HHHHHHHHTTCEEEEECTTTTTTTTSSSS-HHHHHTCCCSEE---EECGGGG-TTSCCEEEEECH--HHHTT--C-----
T ss_pred HHHHHHHHcCCEEEEEcCCcCcccCCcHH-HHHhcCCCCCeE---Eeccccc-CCCceEEEEEhH--HHHHh--h-----
Confidence 68999999999999999999887665322 122222223344 7899988 899999999987 44432 1
Q ss_pred hhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcC----CCcccccCCCccEEEEEec
Q 047983 82 ISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEI----PCITCPKKPEGSMFVMYCG 157 (233)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~~~~~~g~~~~~~~ 157 (233)
.......+++.++..+.++.+.+ +...+ ++..+.++++++++.+.|+++ +.+.. ..+. |.++|
T Consensus 292 ----~~~~~~~t~~~~~~~~aa~~a~L-~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~~~-g~~~~--- 358 (420)
T 2pb2_A 292 ----HVGSHGSTYGGNPLACAVAGAAF-DIINT---PEVLQGIHTKRQQFVQHLQAIDEQFDIFSD-IRGM-GLLIG--- 358 (420)
T ss_dssp ----C----CCEECCCHHHHHHHHHHH-HHHSS---HHHHHHHHHHHHHHHHHHHHHHHHHCCEEE-EEEE-TTEEE---
T ss_pred ----cCCCcCcccCcCHHHHHHHHHHH-HHHHh---ccHHHHHHHHHHHHHHHHHHHHhcCCCeEE-EEec-ceEEE---
Confidence 11111122333333332333333 21111 345667777777777777653 32221 2343 56667
Q ss_pred CCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEee--cCHHHHHHHHHHHHHHHHHH
Q 047983 158 SEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFA--VEPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~--~~~~~l~~~~~~l~~~l~~~ 229 (233)
+.++... +. +..++.. .|.++||.+.|+. .+++|+++. .+++++++++++|.+++++.
T Consensus 359 ------v~~~~~~--~~-~~~~l~~-~l~~~Gi~v~~~~----~~~iRl~~~~~~t~eei~~~~~~l~~~l~~~ 418 (420)
T 2pb2_A 359 ------AELKPKY--KG-RARDFLY-AGAEAGVMVLNAG----ADVMRFAPSLVVEEADIHEGMQRFAQAVGKV 418 (420)
T ss_dssp ------EEECGGG--TT-CHHHHHH-HHHHTTEECEESS----TTEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred ------EEECCCc--hH-HHHHHHH-HHHHCCCEEEeCC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 4443210 00 2344444 4556899999974 579999965 48999999999999998765
No 116
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.69 E-value=1.4e-15 Score=130.96 Aligned_cols=202 Identities=9% Similarity=0.001 Sum_probs=123.0
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccc-cCCCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKR-WIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~-~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|.++|++||+++|+||+|+. +..+..+.. .+..+++.|+||. ++.+|+ ||+++++ ++++.+.-.+.
T Consensus 154 ~~i~~l~~~~~~~li~D~a~~~----g~~~~~~~~---~~~d~~~~s~sK~~~~~~g~--G~l~~~~--~~~~~l~~~~~ 222 (392)
T 2z9v_A 154 DAIGALVSAHGAYLIVDAVSSF----GGMKTHPED---CKADIYVTGPNKCLGAPPGL--TMMGVSE--RAWAKMKANPL 222 (392)
T ss_dssp HHHHHHHHHTTCEEEEECTTTB----TTBSCCGGG---GTCSEEEECSSSTTCCCSCC--EEEEECH--HHHHHHHTCTT
T ss_pred HHHHHHHHHcCCeEEEEccccc----CCccccccc---ccceEEEecCcccccCCCce--eEEEECH--HHHHHhhhccC
Confidence 3789999999999999999984 211122222 2345889999994 455665 9999987 44432100000
Q ss_pred ----hhhhhHHhhh---hhhhhccCcchHH-HHHHHHhhhcHHHH-HHHHHHHHHHHHHHHHHHhhcCCCcccccC-CC-
Q 047983 80 ----HSISLNMRMD---DYLLLSESVYTTV-GAVPQILEKTEEEF-FSKITDILREAADICCDRLKEIPCITCPKK-PE- 148 (233)
Q Consensus 80 ----~~~~~~~~~~---~~~~~~~~~~~~~-~~~~~~l~~~~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~~- 148 (233)
...+...... .......+++... .++...++ ...++ +++.++.++++++++.+.|+++ ++.. .. +.
T Consensus 223 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~-~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~~~~ 299 (392)
T 2z9v_A 223 APRASMLSIVDWENAWSRDKPFPFTPSVSEINGLDVALD-LYLNEGPEAVWARHALTAKAMRAGVTAM-GLSV-WAASDS 299 (392)
T ss_dssp SCCSSTTCSGGGTTTTSTTSCCSSCCCHHHHHHHHHHHH-HHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCB-SSSSGG
T ss_pred CCCceeccHHHHHhhhcccCCCCCCCCHHHHHHHHHHHH-HHHhccHHHHHHHHHHHHHHHHHHHHHc-CCee-ccCCcc
Confidence 0000000000 0001111122222 23322222 22334 6788999999999999999887 5554 33 32
Q ss_pred --ccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEe-e--cCHHHHHHHHHHHH
Q 047983 149 --GSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITF-A--VEPSAFEIGLGRMK 223 (233)
Q Consensus 149 --~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~-~--~~~~~l~~~~~~l~ 223 (233)
.+.++| ++++. +. +..++..++++++||.+.||+.+...+++|+++ + .+++++++++++|.
T Consensus 300 ~~~~~~~~---------~~~~~----~~-~~~~l~~~L~~~~gi~v~~g~~~~~~~~lRi~~~~~~~~~~~i~~~~~~l~ 365 (392)
T 2z9v_A 300 IASPTTTA---------VRTPD----GV-DEKALRQAARARYGVVFSSGRGETLGKLTRIGHMGPTAQPIYAIAALTALG 365 (392)
T ss_dssp GBCTTEEE---------EECCT----TC-CHHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHH
T ss_pred ccCCceEE---------EECCC----CC-CHHHHHHHHHhcCCEEEecCCCCCCCCeEEEeCcccccCHHHHHHHHHHHH
Confidence 466777 44431 11 345555555544599999998876788999995 5 48999999999999
Q ss_pred HHHHHHh
Q 047983 224 AFYYRHA 230 (233)
Q Consensus 224 ~~l~~~~ 230 (233)
+++++..
T Consensus 366 ~~~~~~~ 372 (392)
T 2z9v_A 366 GAMNAAG 372 (392)
T ss_dssp HHHHHTT
T ss_pred HHHHHcC
Confidence 9998764
No 117
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.69 E-value=8.5e-17 Score=138.96 Aligned_cols=198 Identities=16% Similarity=0.056 Sum_probs=110.1
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|.++|++||+++|+||+|+.+..++....+.... ...+++.|+||. ++|+|+||+++++ +++
T Consensus 162 ~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~---~~di~~~S~sK~--l~g~~~G~~~~~~--~~~--------- 225 (374)
T 2aeu_A 162 KKVINTAKNKEAIVFVDDASGARVRLLFNQPPALKL---GADLVVTSTDKL--MEGPRGGLLAGKK--ELV--------- 225 (374)
T ss_dssp HHHHHHHHHHTCCEEEECTTHHHHHHHTTCCCHHHH---TCSEEEEETTSS--SSSCSCEEEEEEH--HHH---------
T ss_pred HHHHHHHHHcCCEEEEECCcccccccccccCCcccc---CCcEEEecCccc--ccCcceEEEEECH--HHH---------
Confidence 378999999999999999999874211100001112 234889999997 4578999999987 444
Q ss_pred hhhhHHhhhhhhh-hccCcchHH-HHHHHHhhhcHHHHHHHHHHHH----HHHHHHHHHHhhcC---CCcccccCCCccE
Q 047983 81 SISLNMRMDDYLL-LSESVYTTV-GAVPQILEKTEEEFFSKITDIL----REAADICCDRLKEI---PCITCPKKPEGSM 151 (233)
Q Consensus 81 ~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~----~~~~~~l~~~L~~~---~~~~~~~~~~~g~ 151 (233)
..+..... ++.++++.. .+....++....+.++...+.. +++++.+.+.|..+ .++.....|.|.+
T Consensus 226 -----~~l~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~g~~ 300 (374)
T 2aeu_A 226 -----DKIYIEGTKFGLEAQPPLLAGIYRALKNFNLERIRKAFERAKNFDLSKIEKLNKELKAIDDNINIVYERTPTGFV 300 (374)
T ss_dssp -----HHHHHHHHTTTCBCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHTTTCTTEEEEEEECSSEEE
T ss_pred -----HHHHHhhccccCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcceeeCCceEE
Confidence 33222211 222223322 3333333222111111111111 22245555555543 2333224566666
Q ss_pred EEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC-CCcEEEEeec-C--HHHHHHHHHHHHHHHH
Q 047983 152 FVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL-KDWLRITFAV-E--PSAFEIGLGRMKAFYY 227 (233)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~-~~~~Rl~~~~-~--~~~l~~~~~~l~~~l~ 227 (233)
|.| .+........++.+++.++++++||.+.||..|.. ++++|++++. + +.+++...+.|.+.++
T Consensus 301 ~~~-----------~~~~~~~~~~~~~~~~~~ll~~~gV~v~~g~~~~~~~~~lRi~~~~~~~~~~~l~~l~~~l~~~l~ 369 (374)
T 2aeu_A 301 IKR-----------VYKDDTINIKKLIEIGFNLLKNYGIITITVAGMPGASKSLRIDLTSRDAERIDDNYIIKAIVESIK 369 (374)
T ss_dssp EEE-----------EESSHHHHHHHHHHHHHHHHHHHCEECSTTSSSCSSCCSEEEETTSGGGGGSCHHHHHHHHHHHHH
T ss_pred EEe-----------ecccccccccchHHHHHHHHHhCCEEEecCCCCCCCCCeEEEEcCCchHHHHHHHHHHHHHHHHHH
Confidence 666 22211000001233667888889999999988854 6799999985 2 2236777777777776
Q ss_pred HHh
Q 047983 228 RHA 230 (233)
Q Consensus 228 ~~~ 230 (233)
+..
T Consensus 370 ~~~ 372 (374)
T 2aeu_A 370 MAF 372 (374)
T ss_dssp HHT
T ss_pred HHh
Confidence 654
No 118
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.69 E-value=3.2e-17 Score=143.78 Aligned_cols=198 Identities=14% Similarity=0.086 Sum_probs=113.8
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHS 81 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~ 81 (233)
+|.++|++||++||+||+|.+| ..+... .....+.... +.|+||.++. |+|+||+++++ ++++.+.-.
T Consensus 225 ~l~~l~~~~~~~li~DEv~~g~-~~g~~~-~~~~~~~~~d---i~t~sK~~~~-G~~iG~~~~~~--~~~~~~~~~---- 292 (429)
T 3k28_A 225 GLREVTEQNGALLIFDEVMTGF-RVAYNC-GQGYYGVTPD---LTCLGKVIGG-GLPVGAYGGKA--EIMRQVAPS---- 292 (429)
T ss_dssp HHHHHHHHHTCEEEEECTTTTT-TSSTTH-HHHHHTCCCS---EEEECGGGGT-TSCCEEEEECH--HHHTTBTTT----
T ss_pred HHHHHHHHcCCEEEEecccccc-ccCcch-HHHHhCCCCc---eehhhhhhcC-CCCeEEEEEcH--HHHhhhccC----
Confidence 6899999999999999999998 554321 1111222222 4579999874 99999999987 454321000
Q ss_pred hhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhc----CCCcccccCCCccEEEEEec
Q 047983 82 ISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKE----IPCITCPKKPEGSMFVMYCG 157 (233)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~~~~~~g~~~~~~~ 157 (233)
.......+++.++..++++.+.+ +... ++.++.++++++++.+.|++ .+.... .++.|.++.|.+.
T Consensus 293 ----~~~~~~~t~~~~~~a~aaa~aal-~~~~----~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~~~g~~~~~~~~ 362 (429)
T 3k28_A 293 ----GPIYQAGTLSGNPLAMAAGYETL-VQLT----PESYVEFERKAEMLEAGLRKAAEKHGIPHH-INRAGSMIGIFFT 362 (429)
T ss_dssp ----SSBCCCCTTTTCHHHHHHHHHHH-HTCC----HHHHHHHHHHHHHHHHHHHHHHHHTTCCCE-EEEETTEEEEESS
T ss_pred ----CCccccCCCCCChHHHHHHHHHH-HHHH----HHHHHHHHHHHHHHHHHHHHHHhhCCCCEE-EEeeccEEEEEEe
Confidence 00011122333333332444444 2222 45566667777777766655 333332 3455555554221
Q ss_pred CCCccccc-ccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeecCHHHHHHHHHHHHHHHHHH
Q 047983 158 SEDKCLLK-LNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAVEPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 158 ~~~~~~~~-~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~~~~~l~~~~~~l~~~l~~~ 229 (233)
+++..... ...+ .. .....+.+.|.++||.+.|++ .+++|+++..+++++++++++|.+++++.
T Consensus 363 ~~~~~~~~~~~~~---~~-~~~~~~~~~l~~~Gv~v~~~~----~~~~r~~~~~t~e~i~~~l~~l~~~l~~~ 427 (429)
T 3k28_A 363 DEPVINYDAAKSS---NL-QFFAAYYREMVEQGVFLPPSQ----FEGLFLSTVHSDADIEATIAAAEIAMSKL 427 (429)
T ss_dssp SSCCCSHHHHTTS---CH-HHHHHHHHHHHHTTEECCSST----TSCBCCCTTCCHHHHHHHHHHHHHHHHTC
T ss_pred cCCcccccccccc---cH-HHHHHHHHHHHHCCeEEecCC----CCCEEEECCCCHHHHHHHHHHHHHHHHHH
Confidence 11110000 0000 00 122444555667899999974 36789988889999999999999998764
No 119
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.69 E-value=7.1e-16 Score=130.79 Aligned_cols=200 Identities=13% Similarity=-0.004 Sum_probs=122.9
Q ss_pred ChHHHHHHHc--CcEEEEccccCccccCCCccccccccCCccCEEEEccCcc-ccCCCCceEEEEEecCCCccccccchh
Q 047983 1 FCIEETTKKL--GIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISK-RWIVPGWRLGWLVTSDPNGILQDLGVA 77 (233)
Q Consensus 1 ~~i~~l~~~~--~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK-~~~~~G~R~G~~~~~~~~~~~~~~~~~ 77 (233)
++|.++|++| |++||+||+|+. +..+..+. ..+..+++.|+|| .++.+| +||+++++ .+++.+.-
T Consensus 141 ~~i~~l~~~~~~~~~li~D~a~~~----~~~~~~~~---~~~~d~~~~s~~K~~~~~~g--~G~~~~~~--~~~~~~~~- 208 (352)
T 1iug_A 141 PALARAFKEKNPEGLVGADMVTSL----LVGEVALE---AMGVDAAASGSQKGLMCPPG--LGFVALSP--RALERLKP- 208 (352)
T ss_dssp HHHHHHHHHHCTTCEEEEECTTTB----TTBCCCSG---GGTCSEEEEESSSTTCCCSC--EEEEEECH--HHHHTCCC-
T ss_pred HHHHHHHHhhCCCCEEEEECCccc----cCcceecc---ccCeeEEEecCcccccCCCc--eeEEEECH--HHHHHhhC-
Confidence 3789999999 999999999973 11111222 2234588999999 444445 89999977 33321000
Q ss_pred hhhhhhhHHhhhhh--hhhccCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCC-ccEEE
Q 047983 78 FFHSISLNMRMDDY--LLLSESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPE-GSMFV 153 (233)
Q Consensus 78 ~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~g~~~ 153 (233)
.....+........ .....+++... .++...++. ..+++++.++.++++++++.+.|+++ ++.. ..|. .+.++
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~~~~~~~~ 285 (352)
T 1iug_A 209 RGYYLDLARELKAQKEGESAWTPAINLVLAVAAVLEE-VLPRLEEHLALKAWQNALLYGVGEEG-GLRP-VPKRFSPAVA 285 (352)
T ss_dssp CSSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHH-HGGGHHHHHHHHHHHHHHHHHHHHHT-TCEE-SCSSBCTTCE
T ss_pred CCceeeHHHHHhhcccCCCCCCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHC-CCcc-cccccCCeEE
Confidence 00000000011111 11111222222 333333322 22237888999999999999999887 6654 4453 67778
Q ss_pred EEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec--CHHHHHHHHHHHHHHHHHHh
Q 047983 154 MYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV--EPSAFEIGLGRMKAFYYRHA 230 (233)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~--~~~~l~~~~~~l~~~l~~~~ 230 (233)
| ++++. +. +..++. +.|.++||.+.||+.....+++|++++. +++++++++++|.+++++..
T Consensus 286 ~---------~~~~~----~~-~~~~~~-~~l~~~gi~v~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 349 (352)
T 1iug_A 286 A---------FYLPE----GV-PYARVK-EAFAQRGAVIAGGQGPLKGKVFRLSLMGAYDRYEALGVAGMFREVLEEIL 349 (352)
T ss_dssp E---------EECCT----TC-CHHHHH-HHHHTTTEECEECCGGGTTTEEEECCCSSCCHHHHHHHHHHHHHHHHHHC
T ss_pred E---------EEcCC----CC-CHHHHH-HHHHHCCEEEEeCCCccCCCEEEEEccccCCHHHHHHHHHHHHHHHHHhc
Confidence 8 54431 12 244444 4455679999999865457899999995 68999999999999987763
No 120
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.69 E-value=1.2e-16 Score=140.92 Aligned_cols=201 Identities=12% Similarity=0.022 Sum_probs=111.8
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCC-ceEEEEEecCCCccccccchhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
+|+++|++||++||+||+|.+|.+++... .....+.... +.++||.++. | +|+||+++++ ++++. +.+
T Consensus 236 ~l~~l~~~~~~~lI~DEv~~g~g~~g~~~-a~~~~~~~~d---i~t~sK~l~~-G~~~ig~v~~~~--~~~~~--~~~-- 304 (448)
T 3dod_A 236 GVRELCTTYDVLMIVDEVATGFGRTGKMF-ACEHENVQPD---LMAAGKGITG-GYLPIAVTFATE--DIYKA--FYD-- 304 (448)
T ss_dssp HHHHHHHHTTCEEEEECTTTTTTTTSSSS-GGGGGTCCCS---EEEECGGGGT-TSSCCEEEEEEH--HHHHT--TCS--
T ss_pred HHHHHHHHhCCEEEEeccccCCCcccchh-hhhhcCCCCC---EEEecccccC-CcCceEEEEECH--HHHHH--hhh--
Confidence 68999999999999999999987666432 2222222222 3478999765 9 5999999987 44432 110
Q ss_pred hhhhHHhhhhhhhhccCcchHHHHHHHHhhhc-HHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCC
Q 047983 81 SISLNMRMDDYLLLSESVYTTVGAVPQILEKT-EEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSE 159 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~ 159 (233)
............+++.++..++++++.+ +.. .++..+..++..+..++.+.+ +..++.+.. ..+. |.++|
T Consensus 305 ~~~~~~~~~~~~t~~~~~~~~aaa~aal-~~~~~~~~~~~~~~~~~~~~~~l~~-l~~~~~~~~-~~~~-g~~~~----- 375 (448)
T 3dod_A 305 DYENLKTFFHGHSYTGNQLGCAVALENL-ALFESENIVEQVAEKSKKLHFLLQD-LHALPHVGD-IRQL-GFMCG----- 375 (448)
T ss_dssp CGGGCCCCCCCCTTTTCHHHHHHHHHHH-HHHHHTTHHHHHHHHHHHHHHHHHH-HTTSTTEEE-EEEE-TTEEE-----
T ss_pred ccccCCcccccCCCCcCHHHHHHHHHHH-HHHhcccHHHHHHHHHHHHHHHHHH-HhcCCCeEE-EEee-eEEEE-----
Confidence 0000000111223333333333444443 211 123344444444444555555 545543322 2333 55666
Q ss_pred Cccccccccccc--CCCCCh---HHHHHHHHhccCEEEECCcccCCCCcEEEEe--ecCHHHHHHHHHHHHHHHHHHhh
Q 047983 160 DKCLLKLNYSLL--EGINSD---TEFALKLAKEESIIVLPGITVGLKDWLRITF--AVEPSAFEIGLGRMKAFYYRHAK 231 (233)
Q Consensus 160 ~~~~~~~~~~~~--~~~~~~---~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~--~~~~~~l~~~~~~l~~~l~~~~~ 231 (233)
+.++.... ...... ...+.+.|.++||.+.|+. +++|++. ..+++++++++++|.+++++..+
T Consensus 376 ----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~-----~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~~ 445 (448)
T 3dod_A 376 ----AELVRSKETKEPYPADRRIGYKVSLKMRELGMLTRPLG-----DVIAFLPPLASTAEELSEMVAIMKQAIHEVTS 445 (448)
T ss_dssp ----EEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECCEET-----TEEEECCCTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred ----EEEccCcccccccchhhHHHHHHHHHHHHCCcEEeccC-----CEEEEECCCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 33321100 000000 2334444557799999862 7999954 45899999999999999987654
No 121
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.69 E-value=4.8e-16 Score=132.27 Aligned_cols=200 Identities=12% Similarity=0.025 Sum_probs=121.6
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|+++|++||++||+||+|+.... +..+ ...+..+++.|+||.++. +.++||+++++ ++++.+.-. ..
T Consensus 151 ~~i~~l~~~~~~~li~Dea~~~~~~----~~~~---~~~~~di~~~s~~K~~~~-~~g~G~~~~~~--~~~~~~~~~-~~ 219 (366)
T 1m32_A 151 DEVGALAHRYGKTYIVDAMSSFGGI----PMDI---AALHIDYLISSANKCIQG-VPGFAFVIARE--QKLAACKGH-SR 219 (366)
T ss_dssp HHHHHHHHHHTCEEEEECTTTTTTS----CCCT---TTTTCSEEEEESSSTTCC-CSSEEEEEEEH--HHHTTCTTC-CS
T ss_pred HHHHHHHHHcCCEEEEECCccccCc----Cccc---cccCccEEEecCcccccC-CCceEEEEECH--HHHHhhcCC-CC
Confidence 3789999999999999999985322 1122 222455899999997533 23479999987 454321100 00
Q ss_pred h-h-hhHHhhhhh-h--hh-ccCcchHH-HHHHHHhhhcHHHH--HHHHHHHHHHHHHHHHHHhhcCCCcccccCC---C
Q 047983 81 S-I-SLNMRMDDY-L--LL-SESVYTTV-GAVPQILEKTEEEF--FSKITDILREAADICCDRLKEIPCITCPKKP---E 148 (233)
Q Consensus 81 ~-~-~~~~~~~~~-~--~~-~~~~~~~~-~~~~~~l~~~~~~~--~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~---~ 148 (233)
. . ++....... . .. ..+++... .++...++ ...++ +++.++.++++++++.+.|+++ ++.. ..| .
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~-~~~~~g~~~~~~~~~~~~~~~l~~~L~~~-~~~~-~~~~~~~ 296 (366)
T 1m32_A 220 SLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALK-ELAKEGGVAARHQRYQQNQRSLVAGMRAL-GFNT-LLDDELH 296 (366)
T ss_dssp CSTTCHHHHHHHHHHTTTCCSSCCCHHHHHHHHHHHH-HHHHHTHHHHHHHHHHHHHHHHHHHHHHT-TCCB-SSCGGGB
T ss_pred CccccHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHH-HHHHccCHhHHHHHHHHHHHHHHHHHHHC-CCee-ccCchhc
Confidence 0 0 000000000 0 00 11222222 23333332 22333 6788999999999999999887 5543 333 4
Q ss_pred ccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec--CHHHHHHHHHHHHHHH
Q 047983 149 GSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV--EPSAFEIGLGRMKAFY 226 (233)
Q Consensus 149 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~--~~~~l~~~~~~l~~~l 226 (233)
+++++| ++++.. .+. +..++. +.|.++||.+.||..| ..+++|++++. +++++++++++|.+++
T Consensus 297 ~~~~~~---------~~~~~~--~~~-~~~~~~-~~l~~~gi~v~~~~~~-~~~~iRi~~~~~~~~~~i~~~~~~l~~~~ 362 (366)
T 1m32_A 297 SPIITA---------FYSPED--PQY-RFSEFY-RRLKEQGFVIYPGKVS-QSDCFRIGNIGEVYAADITALLTAIRTAM 362 (366)
T ss_dssp CSSEEE---------EECCCC--TTC-CHHHHH-HHHHHTTEECEECCCS-SSCEEEEECCSSCCHHHHHHHHHHHHHHC
T ss_pred CceEEE---------EEcCcc--CCC-CHHHHH-HHHHHCCEEEECCcCC-CCCEEEEecCCCCCHHHHHHHHHHHHHHH
Confidence 677888 554320 011 244444 4455669999999877 46899999995 7899999999998876
Q ss_pred HH
Q 047983 227 YR 228 (233)
Q Consensus 227 ~~ 228 (233)
++
T Consensus 363 ~~ 364 (366)
T 1m32_A 363 YW 364 (366)
T ss_dssp TT
T ss_pred Hh
Confidence 53
No 122
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.69 E-value=1.1e-16 Score=138.58 Aligned_cols=184 Identities=17% Similarity=0.221 Sum_probs=114.5
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|+++|++||++||+||+|.++.+.+.. .++...+...+++ |+||.++. |+|+||+++++ ++++. +.
T Consensus 209 ~~i~~l~~~~~~~li~Dea~~~~~~~g~~-~~~~~~~~~~d~~---s~sK~~~~-g~~~G~~~~~~--~~~~~--l~--- 276 (395)
T 1vef_A 209 RAAREITQEKGALLILDEIQTGMGRTGKR-FAFEHFGIVPDIL---TLAKALGG-GVPLGVAVMRE--EVARS--MP--- 276 (395)
T ss_dssp HHHHHHHHHHTCEEEEECTTTTTTTTSSS-STHHHHTCCCSEE---EECGGGGT-TSSCEEEEEEH--HHHHT--SC---
T ss_pred HHHHHHHHHcCCEEEEEecccCCccCCch-hHhhhcCCCCCEE---EEcccccC-CCceEEEEehH--HHHhh--hc---
Confidence 36899999999999999999986554432 1222222222333 88999886 99999999987 34431 11
Q ss_pred hhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCCC
Q 047983 81 SISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSED 160 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~ 160 (233)
......+++.++..+..+.+. ++. ..+ ....+.++++++++.+.|++++.......+..|.++|
T Consensus 277 ------~~~~~~~~~~~~~~~~a~~~a-l~~-~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~g~~~~------ 340 (395)
T 1vef_A 277 ------KGGHGTTFGGNPLAMAAGVAA-IRY-LER--TRLWERAAELGPWFMEKLRAIPSPKIREVRGMGLMVG------ 340 (395)
T ss_dssp ------TTSSCCSSTTCHHHHHHHHHH-HHH-HHH--HTTHHHHHHHHHHHHHHHHTSCCTTEEEEEEETTEEE------
T ss_pred ------cCCcCCCcCCCHHHHHHHHHH-HHH-HHh--CCHHHHHHHHHHHHHHHHHHhhcCceEEEEEEEEEEE------
Confidence 100111122222222122333 221 111 3567888889999999998864311001233567888
Q ss_pred cccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEee--cCHHHHHHHHHHHHHHH
Q 047983 161 KCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFA--VEPSAFEIGLGRMKAFY 226 (233)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~--~~~~~l~~~~~~l~~~l 226 (233)
+.++ . +..++..++++++||.+.|+. .+++|+++. .+++++++++++|.+++
T Consensus 341 ---~~~~--~-----~~~~l~~~l~~~~gi~v~~~~----~~~iRi~~~~~~~~~~i~~~~~~l~~~l 394 (395)
T 1vef_A 341 ---LELK--E-----KAAPYIARLEKEHRVLALQAG----PTVIRFLPPLVIEKEDLERVVEAVRAVL 394 (395)
T ss_dssp ---EEES--S-----CSHHHHHHHHHHHCEECEESS----TTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred ---EEEc--C-----hHHHHHHHHHHHCCeEEecCC----CCEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence 5443 1 145555555537899999963 589999876 48999999999998875
No 123
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.69 E-value=1.1e-16 Score=138.22 Aligned_cols=180 Identities=18% Similarity=0.170 Sum_probs=115.4
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCC-ceEEEEEecCCCccccccchhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
+|+++|++||+++|+||+|.++.+++... .....+...+++ |+||.++ +| +|+||+++++ ++++.+
T Consensus 207 ~i~~l~~~~~~~li~De~~~~~~~~g~~~-~~~~~~~~~d~~---~~SK~l~-gG~~~~G~~~~~~--~~~~~~------ 273 (392)
T 3ruy_A 207 EALEVCKKENVLFVADEIQTGLGRTGKVF-ACDWDNVTPDMY---ILGKALG-GGVFPISCAAANR--DILGVF------ 273 (392)
T ss_dssp HHHHHHHTTTCEEEEECTTTTTTTTSSSS-GGGGGTCCCSEE---EECGGGG-TTTSCCEEEEECH--HHHTTC------
T ss_pred HHHHHHHHcCCEEEEeechhCCCccccch-hhhccCCCCCEE---EEchhhh-CChhhhEEEEECH--HHHhhh------
Confidence 68999999999999999999887765422 222222223333 7789744 36 9999999987 444321
Q ss_pred hhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCC--CcccccCCCccEEEEEecC
Q 047983 81 SISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIP--CITCPKKPEGSMFVMYCGS 158 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~--~~~~~~~~~~g~~~~~~~~ 158 (233)
.......+++.++..+ .+....++. ... ++.++.++++++++.+.|++++ .+.. ..+.|+++.|
T Consensus 274 -----~~~~~~~~~~~~~~~~-~a~~~~l~~-~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~g~~~~~---- 339 (392)
T 3ruy_A 274 -----EPGSHGSTFGGNPLAC-AVSIAALEV-LEE--EKLTERSLQLGEKLVGQLKEIDNPMITE-VRGKGLFIGI---- 339 (392)
T ss_dssp -----CTTSSCCSSTTCHHHH-HHHHHHHHH-HHH--TTHHHHHHHHHHHHHHHHTTCCCTTEEE-EEEETTEEEE----
T ss_pred -----ccCCcCCCCCCCHHHH-HHHHHHHHH-HHh--hhHHHHHHHHHHHHHHHHHHhcCCCceE-EEeeeeEEEE----
Confidence 1111112223223332 333333322 122 6788899999999999998863 2332 4455666655
Q ss_pred CCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEee--cCHHHHHHHHHHHHHHH
Q 047983 159 EDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFA--VEPSAFEIGLGRMKAFY 226 (233)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~--~~~~~l~~~~~~l~~~l 226 (233)
.++ . +..++... |.++||.+.||+ .+++|+++. .+++++++++++|.+++
T Consensus 340 ------~~~--~-----~~~~l~~~-l~~~gi~v~~~~----~~~iRi~~~~~~~~~~i~~~~~~l~~~l 391 (392)
T 3ruy_A 340 ------ELN--E-----PARPYCEQ-LKAAGLLCKETH----ENVIRIAPPLVISEEDLEWAFQKIKAVL 391 (392)
T ss_dssp ------EES--S-----CSHHHHHH-HHTTTEECCCBT----TTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred ------EEc--c-----hHHHHHHH-HHHCCcEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHHHh
Confidence 232 1 24555555 558899999875 589999955 48999999999998876
No 124
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.69 E-value=1e-15 Score=131.48 Aligned_cols=189 Identities=16% Similarity=-0.002 Sum_probs=118.5
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCcc-cc------ccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccc
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHF-VP------MGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQD 73 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~-~~------~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~ 73 (233)
++|+++|++||++||+||+|+.+.++.... .. ...+.. +..+++.|++|. +.+|.|+||+++++. .+.+.
T Consensus 191 ~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~K~-~~~~~~~g~~~~~~~-~~~~~ 267 (397)
T 3f9t_A 191 EELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFDFSL-GVDSITIDPHKM-GHCPIPSGGILFKDI-GYKRY 267 (397)
T ss_dssp HHHHHHHHHHTCEEEEECTTGGGTGGGCCGGGCCTTCCCCCSGGG-TCSEEECCTTTT-TCCCSSCEEEEESSG-GGGGG
T ss_pred HHHHHHHHHhCCeEEEEccccchhhhhcccccccccccccccccc-cCCeEEEccccc-cCCCCCceEEEEeCH-HHHHh
Confidence 378999999999999999999865532110 00 111222 445889999996 667889999999873 22221
Q ss_pred cchhhhhhhhhHHhhhhhhhh-------cc-CcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccc
Q 047983 74 LGVAFFHSISLNMRMDDYLLL-------SE-SVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPK 145 (233)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~-------~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 145 (233)
+ .....+... +. +.... .++...+.........+..+.++++++++.+.|+++ ++..+.
T Consensus 268 --~---------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~ 334 (397)
T 3f9t_A 268 --L---------DVDAPYLTETRQATILGTRVGFGG-ACTYAVLRYLGREGQRKIVNECMENTLYLYKKLKEN-NFKPVI 334 (397)
T ss_dssp --T---------CEECTTSSSSEECSSCSSCCSHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCBSS
T ss_pred --h---------ccCCccccCCCccccccccccchH-HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEEc
Confidence 1 000111100 00 11112 222222211234567788888889999999999988 555333
Q ss_pred CCCccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec--CHHHHHHHHHHHH
Q 047983 146 KPEGSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV--EPSAFEIGLGRMK 223 (233)
Q Consensus 146 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~--~~~~l~~~~~~l~ 223 (233)
+| .+.++| +..+ +...+.+.|.++||.+.||+. .+++|++++. +++++++++++|.
T Consensus 335 ~~-~~~~~~---------~~~~---------~~~~~~~~l~~~gi~v~~~~~---~~~~Ri~~~~~~~~e~i~~~~~~l~ 392 (397)
T 3f9t_A 335 EP-ILNIVA---------IEDE---------DYKEVCKKLRDRGIYVSVCNC---VKALRIVVMPHIKREHIDNFIEILN 392 (397)
T ss_dssp CC-SSSEEE---------EECT---------THHHHHHHHHHTTCBCEECSS---SSEEEEECCTTCCHHHHHHHHHHHH
T ss_pred CC-CccEEE---------EEeC---------CHHHHHHHHHhCCeEEeccCC---CCEEEEEEcCCCCHHHHHHHHHHHH
Confidence 44 455556 3332 234445555677999999764 5899999994 8899999999999
Q ss_pred HHHH
Q 047983 224 AFYY 227 (233)
Q Consensus 224 ~~l~ 227 (233)
++++
T Consensus 393 ~~l~ 396 (397)
T 3f9t_A 393 SIKR 396 (397)
T ss_dssp HHC-
T ss_pred HhhC
Confidence 8764
No 125
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=99.68 E-value=7.5e-16 Score=134.37 Aligned_cols=178 Identities=17% Similarity=0.114 Sum_probs=111.3
Q ss_pred ChHHHHHHH-cCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceE-EEEEecCCCccccccchhh
Q 047983 1 FCIEETTKK-LGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRL-GWLVTSDPNGILQDLGVAF 78 (233)
Q Consensus 1 ~~i~~l~~~-~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~-G~~~~~~~~~~~~~~~~~~ 78 (233)
++|+++|++ +|+++|+||+|..+.+.. ++ ..++.+++.|+||.|+++|+|+ ||+++++ ++++
T Consensus 167 ~~i~~la~~~~~~~li~De~~~~~~~~~----~~----~~~~di~~~S~sK~~~~~g~ri~G~~~~~~--~~~~------ 230 (404)
T 1e5e_A 167 ERVCKDAHSQEGVLVIADNTFCSPMITN----PV----DFGVDVVVHSATKYINGHTDVVAGLICGKA--DLLQ------ 230 (404)
T ss_dssp HHHHHHHHTSTTCEEEEECTTTCTTTCC----GG----GGTCSEEEEETTTTTTCSSCCCCEEEEECH--HHHH------
T ss_pred HHHHHHHHhhcCCEEEEECCCchhhhCC----cc----ccCCEEEEEcCccccCCCCCCeEEEEEECH--HHHH------
Confidence 378999999 999999999999987541 22 1256799999999999999998 9999987 3332
Q ss_pred hhhhhhHHhhhhhhh-h-ccCcchHH--HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCC--------------C
Q 047983 79 FHSISLNMRMDDYLL-L-SESVYTTV--GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIP--------------C 140 (233)
Q Consensus 79 ~~~~~~~~~~~~~~~-~-~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~--------------~ 140 (233)
..+..... + +.+.++.. .+.+.+ + . +....+...++.+.+.+.+++.+ +
T Consensus 231 -------~~l~~~~~~~~g~~~~~~~~~~~~~~l-~-~----~~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~ 297 (404)
T 1e5e_A 231 -------QIRMVGIKDITGSVISPHDAWLITRGL-S-T----LNIRMKAESENAMKVAEYLKSHPAVEKVYYPGFEDHEG 297 (404)
T ss_dssp -------HHHHTCCCCCCCCCCCHHHHHHHHHHH-T-T----HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTCSSSTT
T ss_pred -------HHHHHHHHhCCCCCCCHHHHHHHHHhH-h-H----HHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCcc
Confidence 13332222 1 22233322 223332 2 1 22333444555565556555432 1
Q ss_pred cccccCC----CccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC----------------
Q 047983 141 ITCPKKP----EGSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL---------------- 200 (233)
Q Consensus 141 ~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~---------------- 200 (233)
+.. ..| .|+++.| .++ +..+.+.+++++.|| +.+|..||.
T Consensus 298 ~~~-~~~~~~~~g~~~~~------------~~~------~~~~~~~~~l~~~~i-~~~~~s~G~~~sl~~~~~~~~~~~~ 357 (404)
T 1e5e_A 298 HDI-AKKQMRMYGSMITF------------ILK------SGFEGAKKLLDNLKL-ITLAVSLGGCESLIQHPASMTHAVV 357 (404)
T ss_dssp HHH-HHHHCSSCCSEEEE------------EET------THHHHHHHHHHTCSS-SEESSCCCSSSCEEECGGGTTTTTS
T ss_pred HHH-HHhhCCCCceEEEE------------EeC------CCHHHHHHHHHhCCC-ceeccCCCCcceeeecccccccccC
Confidence 111 112 2777776 222 134567778889999 556655542
Q ss_pred -----------CCcEEEEeecCHHHHHHHHHHHHHHHHHH
Q 047983 201 -----------KDWLRITFAVEPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 201 -----------~~~~Rl~~~~~~~~l~~~~~~l~~~l~~~ 229 (233)
++++|+|++. ++++++++.|+++++..
T Consensus 358 ~~~~~~~~g~~~~~iRis~g~--e~~~~li~~l~~al~~~ 395 (404)
T 1e5e_A 358 PKEEREAAGITDGMIRLSVGI--EDADELIADFKQGLDAL 395 (404)
T ss_dssp CHHHHHHTTCCTTEEEEECCS--SCHHHHHHHHHHHHHHH
T ss_pred CHHHHHhcCCCCCeEEEEeCC--CCHHHHHHHHHHHHHHH
Confidence 5799999998 56677777777777654
No 126
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.68 E-value=2.9e-16 Score=139.71 Aligned_cols=195 Identities=17% Similarity=0.142 Sum_probs=112.9
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHS 81 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~ 81 (233)
+|.++|++||++||+||+|.+|...|... .....+....++ ++||.++..|+|+||+++++ +++
T Consensus 248 ~l~~l~~~~gillI~DEv~~gfgr~G~~~-a~~~~~v~pdi~---t~sK~l~gg~~plG~v~~~~--~i~---------- 311 (472)
T 3hmu_A 248 EIQRICDKYDILLIADEVICGFGRTGNWF-GTQTMGIRPHIM---TIAKGLSSGYAPIGGSIVCD--EVA---------- 311 (472)
T ss_dssp HHHHHHHHTTCEEEEECTTTTTTTTSSSC-HHHHHTCCCSEE---EECGGGTTTSSCCEEEEEEH--HHH----------
T ss_pred HHHHHHHHcCCEEEEEccccCCcccCccc-hhHHhCCCCcee---eechhhhcCCcceEEEEECH--HHH----------
Confidence 68999999999999999999987666321 122222223333 68999877779999999987 333
Q ss_pred hhhHHhhh-----hhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHH-HHHHHHHHHhhc---CCCcccccCCCccEE
Q 047983 82 ISLNMRMD-----DYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILR-EAADICCDRLKE---IPCITCPKKPEGSMF 152 (233)
Q Consensus 82 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~l~~~L~~---~~~~~~~~~~~~g~~ 152 (233)
..+. ...+++.++..++++++.+ +...+ +...+.++ ++.+++.+.|++ ++.+.. ..+.|.++
T Consensus 312 ----~~~~~~~~~~~~t~~~np~a~aAa~aaL-~~~~~---~~~~~~~~~~~~~~l~~~L~~l~~~~~v~~-vr~~G~~~ 382 (472)
T 3hmu_A 312 ----HVIGKDEFNHGYTYSGHPVAAAVALENL-RILEE---ENILDHVRNVAAPYLKEKWEALTDHPLVGE-AKIVGMMA 382 (472)
T ss_dssp ----HHHTTSCBCCCCTTTTCHHHHHHHHHHH-HHHHH---TTHHHHHHHTHHHHHHHHHHGGGGSTTEEE-EEEETTEE
T ss_pred ----HhcccCCccccCCCCCCHHHHHHHHHHH-HHHHH---hHHHHHHHHHHHHHHHHHHHHHhcCCCeEE-EEecCceE
Confidence 3331 1122333333333444444 21111 23444455 555555555544 333332 45555555
Q ss_pred EEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEE--eecCHHHHHHHHHHHHHHHHHHh
Q 047983 153 VMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRIT--FAVEPSAFEIGLGRMKAFYYRHA 230 (233)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~--~~~~~~~l~~~~~~l~~~l~~~~ 230 (233)
.+.+. ++..+ +.++.. ........+.+.|.++||.+.|+. +++|++ +..+++++++++++|.+++++..
T Consensus 383 ~i~~~-~~~~~-~~~~~~--~~~~~~~~~~~~l~~~Gv~v~~~g-----~~iRi~p~~~~t~e~i~~~l~~l~~~l~~~~ 453 (472)
T 3hmu_A 383 SIALT-PNKAS-RAKFAS--EPGTIGYICRERCFANNLIMRHVG-----DRMIISPPLVITPAEIDEMFVRIRKSLDEAQ 453 (472)
T ss_dssp EEEEC-SCGGG-TCCBSS--CTTHHHHHHHHHHHHTTBCCEEET-----TEEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEe-cCccc-cccccc--hhHHHHHHHHHHHHHCCcEEEecC-----CEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 54111 11100 000000 000013444555667899999863 799999 45599999999999999988764
No 127
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.67 E-value=2.3e-16 Score=138.80 Aligned_cols=188 Identities=13% Similarity=0.095 Sum_probs=112.9
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCC-ceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|.++|++||++||+||+|.+|.+++... .+...+....+ .|+||.++ +| +|+||+++++ ++++. +.
T Consensus 236 ~~l~~l~~~~g~llI~DEv~~g~g~~g~~~-~~~~~~~~~di---~t~sK~l~-~G~~~~G~v~~~~--~~~~~--l~-- 304 (433)
T 1z7d_A 236 QGVYDICKKYNVLFVADEVQTGLGRTGKLL-CVHHYNVKPDV---ILLGKALS-GGHYPISAVLAND--DIMLV--IK-- 304 (433)
T ss_dssp HHHHHHHHHTTCEEEEECTTTTTTTTSSSS-GGGGGTCCCSE---EEECGGGG-TTSSCCEEEEECH--HHHTT--CC--
T ss_pred HHHHHHHHHcCCEEEEecCccCCCcCCcch-hhHhcCCCCCE---EEECcccc-CCCCCeEEEEECH--HHHhh--hc--
Confidence 368999999999999999999876655321 11112222223 38999988 79 9999999987 44432 11
Q ss_pred hhhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcC----CCcccccCCCccEEEEE
Q 047983 80 HSISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEI----PCITCPKKPEGSMFVMY 155 (233)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~~~~~~g~~~~~ 155 (233)
......+++.++..++++.+.+ +...+ .+..+.++++++++.+.|+++ +.... ..+ .|.++|
T Consensus 305 -------~~~~~~t~~~~~~~~aaa~aal-~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~-~~~-~g~~~~- 370 (433)
T 1z7d_A 305 -------PGEHGSTYGGNPLAASICVEAL-NVLIN---EKLCENAEKLGGPFLENLKRELKDSKIVRD-VRG-KGLLCA- 370 (433)
T ss_dssp -------TTCCCCTTTTCHHHHHHHHHHH-HHHHH---TTHHHHHHHHHHHHHHHHHHHHTTCTTEEE-EEE-ETTEEE-
T ss_pred -------cccccccCCCCHHHHHHHHHHH-HHHHh---ccHHHHHHHHHHHHHHHHHHHHHhCCCeEE-EEe-eeeEEE-
Confidence 1111222333333332333333 21111 234556666777777776553 22211 223 466677
Q ss_pred ecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEee--cCHHHHHHHHHHHHHHHHHHh
Q 047983 156 CGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFA--VEPSAFEIGLGRMKAFYYRHA 230 (233)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~--~~~~~l~~~~~~l~~~l~~~~ 230 (233)
+.++... .+..++... |.++||.+.|+ ..+++|+++. .+++++++++++|.+++++..
T Consensus 371 --------i~~~~~~----~~~~~~~~~-l~~~Gv~v~~~----~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 430 (433)
T 1z7d_A 371 --------IEFKNEL----VNVLDICLK-LKENGLITRDV----HDKTIRLTPPLCITKEQLDECTEIIVKTVKFFD 430 (433)
T ss_dssp --------EEECTTT----CCHHHHHHH-HHHTTEECCEE----TTTEEEECCCTTCCHHHHHHHHHHHHHHHHHHC
T ss_pred --------EEEccCh----hHHHHHHHH-HHHCCeEEecC----CCCEEEEECCcCCCHHHHHHHHHHHHHHHHHHH
Confidence 4443210 124444444 45679999985 2579999776 489999999999999988764
No 128
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.67 E-value=3.1e-15 Score=128.18 Aligned_cols=200 Identities=14% Similarity=0.037 Sum_probs=123.2
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccC-CCCceEEEEEecCCCcccccc-chhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWI-VPGWRLGWLVTSDPNGILQDL-GVAF 78 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~R~G~~~~~~~~~~~~~~-~~~~ 78 (233)
++|.++|++||+++|+||+|+.... ...+ ...+..+++.|+||.++ .+| +||+++++ ++++.+ .-..
T Consensus 147 ~~i~~l~~~~~~~li~D~a~~~~~~----~~~~---~~~~~d~~~~s~~K~~~~~~g--~g~~~~~~--~~~~~~~~~~~ 215 (384)
T 3zrp_A 147 KDVINKIRKYVELIVVDGVSSVGAE----EVKA---EEWNVDVYLTASQKALGSAAG--LGLLLLSP--KALSILDSQNS 215 (384)
T ss_dssp HHHHHHHGGGEEEEEEECTTTTTTS----CCCT---TTTTCSEEEEETTSTTCCCSS--EEEEEECH--HHHHHHHHCCC
T ss_pred HHHHHHHHhcCCEEEEECcccccCc----cccc---cccCCCEEEecCcccccCCCc--eEEEEECH--HHHHHhcCCCC
Confidence 3789999999999999999885321 1112 22245589999999764 444 99999987 444321 0000
Q ss_pred hhhhhh-HHhhhhh-------hhhcc-CcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCC
Q 047983 79 FHSISL-NMRMDDY-------LLLSE-SVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPE 148 (233)
Q Consensus 79 ~~~~~~-~~~~~~~-------~~~~~-~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~ 148 (233)
...... ....... ..... +++... .++...+.......+++.++.++++++++.+.|+++ ++.. ..+.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~~ 293 (384)
T 3zrp_A 216 IAGYYLDLRNWLPVMRGAEEGKAAYFATPPVHVILQLAEAFRLIEKEGIENRIKRHTMVASAIRAGLEAL-GLEI-VARR 293 (384)
T ss_dssp SCCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCB-SCSS
T ss_pred CCcccccHHHHHHHHHhhcccCCCcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHC-CCeE-ccCc
Confidence 000000 0111110 00111 222222 333333322222347889999999999999999887 5554 4444
Q ss_pred ----ccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec--CHHHHHHHHHHH
Q 047983 149 ----GSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV--EPSAFEIGLGRM 222 (233)
Q Consensus 149 ----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~--~~~~l~~~~~~l 222 (233)
++.++| +.++. . +..++. +.|.++||.+.||..+.. +++|+++.. +++++++++++|
T Consensus 294 ~~~~~~~~~~---------~~~~~-----~-~~~~~~-~~l~~~gi~v~~g~~~~~-~~iRi~~~~~~~~e~i~~~~~~l 356 (384)
T 3zrp_A 294 PESYSNTVTG---------VILKV-----A-DPQKVL-AGTVNEGVEFAPGVHPAF-KYFRIGHMGWVTPNDAIIAISVI 356 (384)
T ss_dssp GGGBCSSEEE---------EECSS-----S-CHHHHH-HHHHTTTCCCEECCCTTC-CEEEEECCSSCCHHHHHHHHHHH
T ss_pred ccccCccEEE---------EECCC-----C-CHHHHH-HHHHHCCEEEecCCCCCc-CEEEEeccccCCHHHHHHHHHHH
Confidence 567777 44432 1 244444 445566999999875433 899999884 899999999999
Q ss_pred HHHHHHHh
Q 047983 223 KAFYYRHA 230 (233)
Q Consensus 223 ~~~l~~~~ 230 (233)
.+++++..
T Consensus 357 ~~~l~~~~ 364 (384)
T 3zrp_A 357 ERTLRKLG 364 (384)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHcC
Confidence 99998764
No 129
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.67 E-value=2e-15 Score=129.43 Aligned_cols=193 Identities=14% Similarity=-0.008 Sum_probs=122.4
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|+++|++||++ |+||+|+. +..+..+.. .+..+++.|+||.++.+| +||+++++.. .++. .. +
T Consensus 158 ~~i~~l~~~~~~~-i~D~a~~~----g~~~~~~~~---~~~di~~~s~sK~~g~~g--~G~~~~~~~~-~l~~--~~--~ 222 (382)
T 4eb5_A 158 EEISEVLAGKAAL-HIDATASV----GQIEVDVEK---IGADMLTISSNDIYGPKG--VGALWIRKEA-KLQP--VI--L 222 (382)
T ss_dssp HHHHHHHTTSSEE-EEECTTTB----TTBCCCHHH---HTCSEEEEETGGGTCCSS--CEEEEEETTC-CCCC--SS--C
T ss_pred HHHHHHHHHCCCE-EEEcchhc----CCcccCccc---cCCCEEEeehHHhcCCCc--eEEEEEcccc-ccCc--ee--c
Confidence 3789999999999 99999983 212122222 234588999999877666 7999998731 1211 11 0
Q ss_pred hhhhHHhhhhhhhhccCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCc---cEEEEEe
Q 047983 81 SISLNMRMDDYLLLSESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEG---SMFVMYC 156 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~---g~~~~~~ 156 (233)
.. ...... ..+ +++... .++...++ ...+.+++.++.++++++.+.+.|++++++.. ..|.+ +.+++
T Consensus 223 ~~---~~~~~~-~~~-~~~~~~~~~~~~al~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~~~~~-- 293 (382)
T 4eb5_A 223 GG---GQENGL-RSG-SENVPSIVGFGKAAE-ITAMEWREEAERLRRLRDRIIDNVLKIEESYL-NGHPEKRLPNNVN-- 293 (382)
T ss_dssp SS---CTGGGT-SCS-CCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEE-CSCSSSBCTTEEE--
T ss_pred CC---Cccccc-cCC-CccHHHHHHHHHHHH-HHHHhHHHHHHHHHHHHHHHHHHHhhCCCeEE-eCCcccCCCCEEE--
Confidence 00 000111 111 122222 33332222 22345788899999999999999998876654 34432 44556
Q ss_pred cCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC-------------------CCcEEEEeec--CHHHH
Q 047983 157 GSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL-------------------KDWLRITFAV--EPSAF 215 (233)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~-------------------~~~~Rl~~~~--~~~~l 215 (233)
++++ +. +..++. +.|.++||.+.||..|.. .+++|++++. +++++
T Consensus 294 -------~~~~-----~~-~~~~~~-~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i 359 (382)
T 4eb5_A 294 -------VRFS-----YI-EGESIV-LSLDMAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDV 359 (382)
T ss_dssp -------EEET-----TS-CHHHHH-HHHHHHTCBCBCCCGGGTSSCCCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHH
T ss_pred -------EEeC-----Cc-CHHHHH-HHHHHCCEEEeccccccCCCCcccHHHHHcCCChhccCCeEEEECCCCCCHHHH
Confidence 4443 11 244444 455678999999987542 4799999994 89999
Q ss_pred HHHHHHHHHHHHHHhh
Q 047983 216 EIGLGRMKAFYYRHAK 231 (233)
Q Consensus 216 ~~~~~~l~~~l~~~~~ 231 (233)
++++++|.+++++.++
T Consensus 360 ~~~~~~l~~~~~~~~~ 375 (382)
T 4eb5_A 360 DRLLEVLPGVIERLRS 375 (382)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999987754
No 130
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.67 E-value=1.1e-16 Score=140.19 Aligned_cols=192 Identities=14% Similarity=0.029 Sum_probs=105.0
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHS 81 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~ 81 (233)
+|+++|++||++||+||+|.+| ..+.. ......+... .+.|+||.++ +|+|+||+++++ ++++.+.-.
T Consensus 224 ~l~~l~~~~~~~li~DEv~~g~-~~g~~-~~~~~~~~~~---di~t~sK~~~-~G~~~G~~~~~~--~~~~~~~~~---- 291 (427)
T 3fq8_A 224 GLREITLEHDALLVFDEVITGF-RIAYG-GVQEKFGVTP---DLTTLGKIIG-GGLPVGAYGGKR--EIMQLVAPA---- 291 (427)
T ss_dssp HHHHHHHHTTCEEEEECTTTBT-TTBTT-HHHHHTTCCC---SEEEECGGGG-TTSSCEEEEECH--HHHTTBTTT----
T ss_pred HHHHHHHHcCCEEEEecccccc-ccCcc-hhhHhcCCCC---Chhhhhhhhh-CCcceEEEEEcH--HHHHhhccC----
Confidence 6899999999999999999988 55432 1111112111 2468999988 799999999977 444321100
Q ss_pred hhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhc----CCCcccccCCCccEEEEEec
Q 047983 82 ISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKE----IPCITCPKKPEGSMFVMYCG 157 (233)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~~~~~~g~~~~~~~ 157 (233)
.......+++.++..++++.+.+ +...+ +...+.++++++.+.+.|++ ++... ..+..|.++|
T Consensus 292 ----~~~~~~~t~~~~~~~~aa~~aal-~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~g~~~~--- 358 (427)
T 3fq8_A 292 ----GPMYQAGTLSGNPLAMTAGIKTL-ELLRQ---PGTYEYLDQITKRLSDGLLAIAQETGHAA--CGGQVSGMFG--- 358 (427)
T ss_dssp ----SSBCCCCTTTTCHHHHHHHHHHH-HHHTS---TTHHHHHHHHHHHHHHHHHHHHHHTTCCC--EEEEETTEEE---
T ss_pred ----CCccccCCCCcCHHHHHHHHHHH-HHHHh---cCHHHHHHHHHHHHHHHHHHHHHhCCCCe--EEEEeeeEEE---
Confidence 00001112222233332334433 21111 12333444444444444433 32221 2233466777
Q ss_pred CCCcccccccccccC-----CCCC--hHHHHHHHHhccCEEEECCcccCCCCcEEEEeecCHHHHHHHHHHHHHHHHH
Q 047983 158 SEDKCLLKLNYSLLE-----GINS--DTEFALKLAKEESIIVLPGITVGLKDWLRITFAVEPSAFEIGLGRMKAFYYR 228 (233)
Q Consensus 158 ~~~~~~~~~~~~~~~-----~~~~--~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~~~~~l~~~~~~l~~~l~~ 228 (233)
+.++..... ...+ ....+.+.|.++||.+.|++. .++|+++..+++++++++++|.+++++
T Consensus 359 ------~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gi~v~~~~~----~r~~~~~~~t~e~i~~~l~~l~~~l~~ 426 (427)
T 3fq8_A 359 ------FFFTEGPVHNYEDAKKSDLQKFSRFHRGMLEQGIYLAPSQF----EAGFTSLAHTEEDIDATLAAARTVMSA 426 (427)
T ss_dssp ------EESSSCCCCSHHHHTTSCHHHHHHHHHHHHHTTEECCSSTT----SCEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred ------EEEecCccccccccccccHHHHHHHHHHHHHCCcEEecCCC----CCEEeeCcCCHHHHHHHHHHHHHHHHh
Confidence 333211000 0000 123455556678999999753 366777777999999999999998865
No 131
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.66 E-value=4.3e-16 Score=136.42 Aligned_cols=182 Identities=10% Similarity=0.058 Sum_probs=112.4
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCC-ceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|+++|++||+++|+||+|.+|.+.+.. ..+...+...+++ |+||.++ +| +|+||+++++ ++++
T Consensus 229 ~~i~~l~~~~~~~li~De~~~~~g~~g~~-~~~~~~~~~~d~~---t~sK~l~-~G~~~iG~~~~~~--~~~~------- 294 (429)
T 1s0a_A 229 KRIRKICDREGILLIADEIATGFGRTGKL-FACEHAEIAPDIL---CLGKALT-GGTMTLSATLTTR--EVAE------- 294 (429)
T ss_dssp HHHHHHHHHHTCEEEEECTTTTTTTTSSS-SGGGGGTCCCSEE---EECGGGG-TSSSCCEEEEECH--HHHH-------
T ss_pred HHHHHHHHHcCCEEEEeehhhCCcccchH-HHhhhcCCCCCEE---Eeccccc-CCCccceEEEeCH--HHHH-------
Confidence 36899999999999999999988655432 1222222223333 7999977 58 9999999987 3432
Q ss_pred hhhhhHHhhhh--------hhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcC---CCcccccCCC
Q 047983 80 HSISLNMRMDD--------YLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEI---PCITCPKKPE 148 (233)
Q Consensus 80 ~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---~~~~~~~~~~ 148 (233)
.+.. ..+++.++..+.++.+.+ +.. .+ ....+.++++++++.+.|+++ +.+.. ..+.
T Consensus 295 -------~l~~~~~~~~~~~~t~~~n~~~~~a~~aal-~~~-~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~-~~~~ 362 (429)
T 1s0a_A 295 -------TISNGEAGCFMHGPTFMGNPLACAAANASL-AIL-ES--GDWQQQVADIEVQLREQLAPARDAEMVAD-VRVL 362 (429)
T ss_dssp -------HHHTSTTSSCSCCCTTTTCHHHHHHHHHHH-HHH-HT--CHHHHHHHHHHHHHHHHHGGGGGCTTEEE-EEEE
T ss_pred -------HhhcCCCcccccCCCCCCCHHHHHHHHHHH-HHH-Hh--CCHHHHHHHHHHHHHHHHHHHhcCCCEEE-EEEe
Confidence 2221 112222333332333333 211 11 234566777788888888764 33321 3344
Q ss_pred ccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEee--cCHHHHHHHHHHHHHHH
Q 047983 149 GSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFA--VEPSAFEIGLGRMKAFY 226 (233)
Q Consensus 149 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~--~~~~~l~~~~~~l~~~l 226 (233)
|.|+| +.++.. . +..++... |.++||.+.|+ .+++|++++ .+++++++++++|.+++
T Consensus 363 -g~~~~---------~~~~~~----~-~~~~l~~~-l~~~Gi~v~~~-----~~~iRis~~~~~t~e~i~~~~~~l~~~~ 421 (429)
T 1s0a_A 363 -GAIGV---------VETTHP----V-NMAALQKF-FVEQGVWIRPF-----GKLIYLMPPYIILPQQLQRLTAAVNRAV 421 (429)
T ss_dssp -TTEEE---------EEESSC----B-CHHHHHHH-HHHTTEECCCB-----TTEEEECCCTTCCHHHHHHHHHHHHHHT
T ss_pred -eEEEE---------EEECCc----c-cHHHHHHH-HHHCCCEEecc-----CCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 45777 444311 1 24445544 44789999884 279999965 48999999999999887
Q ss_pred HHH
Q 047983 227 YRH 229 (233)
Q Consensus 227 ~~~ 229 (233)
++.
T Consensus 422 ~~~ 424 (429)
T 1s0a_A 422 QDE 424 (429)
T ss_dssp SSG
T ss_pred Hhh
Confidence 654
No 132
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.66 E-value=4.3e-15 Score=128.14 Aligned_cols=204 Identities=12% Similarity=-0.016 Sum_probs=123.5
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhh--
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAF-- 78 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~-- 78 (233)
++|+++|+++|++||+||+|.. +. .+..+ ...+..+++.|++|.++. +.++||+++++ .+++.+...+
T Consensus 163 ~~i~~l~~~~~~~li~Dea~~~---g~-~~~~~---~~~~~d~~~~s~~K~~~~-~~g~g~~~~~~--~~~~~~~~~~~~ 232 (396)
T 2ch1_A 163 EGVGQICHQHDCLLIVDAVASL---CG-VPFYM---DKWEIDAVYTGAQKVLGA-PPGITPISISP--KALDVIRNRRTK 232 (396)
T ss_dssp TTHHHHHHHTTCEEEEECTTTB---TT-BCCCT---TTTTCCEEECCCC-CCCC-CSSCEEEEECH--HHHHHHHTCSSC
T ss_pred HHHHHHHHHcCCEEEEEccccc---cC-Cccch---hhcCcCEEEEcCCccccC-CCCeEEEEECH--HHHHhhhhccCc
Confidence 5799999999999999999983 21 22222 222223667899996443 24459999976 3442110000
Q ss_pred hhh-hhhHHhhhhhh------hhc-cCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCc
Q 047983 79 FHS-ISLNMRMDDYL------LLS-ESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEG 149 (233)
Q Consensus 79 ~~~-~~~~~~~~~~~------~~~-~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~ 149 (233)
... .......+.+. ... .+.+... .++...++...++++++.++.++++++++.+.|+++ ++.. ..|.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~~~ 310 (396)
T 2ch1_A 233 SKVFYWDLLLLGNYWGCYDEPKRYHHTVASNLIFALREALAQIAEEGLENQIKRRIECAQILYEGLGKM-GLDI-FVKDP 310 (396)
T ss_dssp CSCGGGCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-TCCB-SSCSG
T ss_pred ccceEechHHHHHhhhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHC-CCee-ccCCc
Confidence 000 00000000000 111 1122222 333333333233567888999999999999999887 5554 45554
Q ss_pred c----EEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEe-e-c-CHHHHHHHHHHH
Q 047983 150 S----MFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITF-A-V-EPSAFEIGLGRM 222 (233)
Q Consensus 150 g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~-~-~-~~~~l~~~~~~l 222 (233)
+ .++| ++++. +. +..++..++++++||.+.||..+...+++|+++ + . +++++++++++|
T Consensus 311 ~~~~~~~~~---------~~~~~----~~-~~~~~~~~L~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l 376 (396)
T 2ch1_A 311 RHRLPTVTG---------IMIPK----GV-DWWKVSQYAMNNFSLEVQGGLGPTFGKAWRVGIMGECSTVQKIQFYLYGF 376 (396)
T ss_dssp GGBCTTEEE---------EECCT----TC-CHHHHHHHHHHHHCBCCBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHH
T ss_pred cccCCceEE---------EEcCC----CC-CHHHHHHHHHHhCCEEEecCccccCCCEEEEECCCCcCCHHHHHHHHHHH
Confidence 3 3667 44431 12 355666666666799999998776788999999 4 2 788999999999
Q ss_pred HHHHHHHh
Q 047983 223 KAFYYRHA 230 (233)
Q Consensus 223 ~~~l~~~~ 230 (233)
.+++++..
T Consensus 377 ~~~l~~~~ 384 (396)
T 2ch1_A 377 KESLKATH 384 (396)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHhC
Confidence 99998764
No 133
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.66 E-value=2e-16 Score=134.91 Aligned_cols=188 Identities=11% Similarity=-0.014 Sum_probs=116.0
Q ss_pred ChHHHHHHHcCcEEEEccccCcc--ccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHL--VFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAF 78 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~--~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~ 78 (233)
++|+++|++||++||+||+|... .+.+.....+. ...+ +++.|+||.++.++. ||+++++ ++++. +
T Consensus 159 ~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~--~~~d--~~~~s~sK~~~~~~g--g~~~~~~--~~~~~---~- 226 (357)
T 3lws_A 159 ETISRYCRERGIRLHLDGARLFEMLPYYEKTAAEIA--GLFD--SIYISFYKGLGGIAG--AILAGPA--AFCQT---A- 226 (357)
T ss_dssp HHHHHHHHHTTCEEEEEETTHHHHHHHHTCCHHHHH--TTSS--EEEEESSSTTCCSSC--EEEEECH--HHHHH---H-
T ss_pred HHHHHHHHHcCCEEEEECchhhhhhhhcCCChHHHH--hcCC--EEEEeccccCCCCce--EEEEcCH--HHHHH---H-
Confidence 36899999999999999998722 11122211111 1223 337899999844433 9999876 34421 1
Q ss_pred hhhhhhHHhhhhhhhhccCcchHH--HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEe
Q 047983 79 FHSISLNMRMDDYLLLSESVYTTV--GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYC 156 (233)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~ 156 (233)
...+.....+.....+. .+++++ +.+.+.+ +.+.++++.+.+.|++++++.....|.+++|+|
T Consensus 227 -------~~~~~~~~~~~~~~~~~~~~~~~~l-----~~~~~~~-~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~-- 291 (357)
T 3lws_A 227 -------RIWKRRYGGDLISLYPYIVSADYYY-----ELRKDRM-GQYYEQAKQLAEQFNALPGVHTTPEVPVSNMFH-- 291 (357)
T ss_dssp -------HHHHHHTTCCCSCCHHHHHHHHHHH-----HHHTTCH-HHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEE--
T ss_pred -------HHHHHHhcCCcccchHHHHHHHHHH-----HHHHHHH-HHHHHHHHHHHHHHHhCCCCeeccCCCcceEEE--
Confidence 22222111111112222 222222 1233333 346788889999999987776423567888999
Q ss_pred cCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC-CCcEEEEee-----cCHHHHHHHHHHHHHHH
Q 047983 157 GSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL-KDWLRITFA-----VEPSAFEIGLGRMKAFY 226 (233)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~-~~~~Rl~~~-----~~~~~l~~~~~~l~~~l 226 (233)
++++... . ++.+.+.+.|.++||.+.||..|.+ ..++|++++ .+.+++++++++|.+.+
T Consensus 292 -------~~~~~~~---~-~~~~~~~~~l~~~Gi~v~~g~~~~~~~~~~r~~i~~~~~~~~~~~l~~al~~l~~al 356 (357)
T 3lws_A 292 -------LHFDGQA---A-DISPKLEQVQEETGLGFVGYLVDKDGYCSTEISVGDAYGELDQQTRDAGFARLRQAF 356 (357)
T ss_dssp -------EEEESCH---H-HHHHHHHHHHHHHCEESCSCCEECSSEEEEEEEBCTTGGGSCHHHHHHHHHHHHHHC
T ss_pred -------EEecCCh---H-HHHHHHHHHHHhcCeEEecccccCCCceEEEEEecchhhhcCHHHHHHHHHHHHHhc
Confidence 5554210 0 1245567778889999999977764 358999987 37889999999998764
No 134
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.66 E-value=5.6e-16 Score=138.00 Aligned_cols=193 Identities=21% Similarity=0.208 Sum_probs=113.4
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCcccccc-ccCCccCEEEEccCccccCCCC-ceEEEEEecCCCccccccchhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMG-VFGSIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~-~~~~~~~~i~~~s~sK~~~~~G-~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
+|.++|++||++||+||+|.+|..+|... .+. ..+-.+.++ ++||.++. | +|+||+++++ ++++. +.
T Consensus 246 ~l~~lc~~~gillI~DEv~~g~gr~G~~~-~~~~~~~v~pdi~---t~sK~l~~-G~~plg~v~~~~--~i~~~--~~-- 314 (476)
T 3i5t_A 246 RFKAICEKHDILYISDEVVTGFGRCGEWF-ASEKVFGVVPDII---TFAKGVTS-GYVPLGGLAISE--AVLAR--IS-- 314 (476)
T ss_dssp HHHHHHHHTTCEEEEECTTTTTTTTSSSC-HHHHTTCCCCSEE---EECGGGGT-TSSCCEEEEECH--HHHHT--TS--
T ss_pred HHHHHHHHcCCEEEEEecccCCccccCce-eeecccCCCcchh---hhhhhhcC-CCcCeEEEEECH--HHHHH--Hh--
Confidence 68999999999999999999987776421 122 222222333 68999775 8 9999999987 44432 11
Q ss_pred hhhhhHHh------hhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcC---CCcccccCCCcc
Q 047983 80 HSISLNMR------MDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEI---PCITCPKKPEGS 150 (233)
Q Consensus 80 ~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---~~~~~~~~~~~g 150 (233)
.. +....+++.++..++++++.+ +. .++ +...+.++++.+++.+.|+.+ +.+.. ..+.|.
T Consensus 315 ------~~~~~~~~~~~~~t~~~np~a~aAa~aaL-~~-~~~--~~~~~~~~~~~~~l~~~L~~l~~~~~v~~-v~~~G~ 383 (476)
T 3i5t_A 315 ------GENAKGSWFTNGYTYSNQPVACAAALANI-EL-MER--EGIVDQAREMADYFAAALASLRDLPGVAE-TRSVGL 383 (476)
T ss_dssp ------GGGCTTCEECCCCTTTTCHHHHHHHHHHH-HH-HHH--TTHHHHHHHHHHHHHHHHHTTTTSTTEEE-EEEETT
T ss_pred ------cCCcccccccccCCCCcCHHHHHHHHHHH-HH-HHh--HHHHHHHHHHHHHHHHHHHHHhcCCCeEE-EEecCc
Confidence 11 011122333333332444444 21 111 345566666666776666654 33332 345555
Q ss_pred EEEEEecCCCccccccccccc--CCCCC---hHHHHHHHHhccCEEEECCcccCCCCcEEEE--eecCHHHHHHHHHHHH
Q 047983 151 MFVMYCGSEDKCLLKLNYSLL--EGINS---DTEFALKLAKEESIIVLPGITVGLKDWLRIT--FAVEPSAFEIGLGRMK 223 (233)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~--~~~~~---~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~--~~~~~~~l~~~~~~l~ 223 (233)
+ ++ +.+..... ....+ ....+.+.|.++||.+.|.. +++|++ +..+++++++++++|.
T Consensus 384 ~-~~---------i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g-----~~iRi~p~l~~t~e~i~~~l~~l~ 448 (476)
T 3i5t_A 384 V-GC---------VQCLLDPTRADGTAEDKAFTLKIDERCFELGLIVRPLG-----DLCVISPPLIISRAQIDEMVAIMR 448 (476)
T ss_dssp E-EE---------EEECCC-----CCHHHHHHHHHHHHHHHHTTEECEEET-----TEEEECCCTTCCHHHHHHHHHHHH
T ss_pred e-eE---------EEEecCccccccccchhHHHHHHHHHHHHCCCEEEecC-----CEEEEECCCCCCHHHHHHHHHHHH
Confidence 4 44 22211100 00000 13344455567799999842 799999 5569999999999999
Q ss_pred HHHHHHhh
Q 047983 224 AFYYRHAK 231 (233)
Q Consensus 224 ~~l~~~~~ 231 (233)
+++++..+
T Consensus 449 ~~l~~~~~ 456 (476)
T 3i5t_A 449 QAITEVSA 456 (476)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99987754
No 135
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.65 E-value=1.8e-16 Score=138.99 Aligned_cols=196 Identities=12% Similarity=0.053 Sum_probs=105.3
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHS 81 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~ 81 (233)
+|.++|++||++||+||+|.+| ..+.. ......+.... +.|+||.++ +|+|+||+++++ ++++.+.-.
T Consensus 225 ~l~~l~~~~~~lli~DEv~~g~-r~g~~-~~~~~~~~~pd---i~t~sK~~~-~G~~~G~~~~~~--~~~~~l~~~---- 292 (429)
T 4e77_A 225 GLRALCDEFGALLIIDEVMTGF-RVALA-GAQDYYHVIPD---LTCLGKIIG-GGMPVGAFGGRR--EVMNALAPT---- 292 (429)
T ss_dssp HHHHHHHHHTCEEEEEETTTBT-TTBTT-CHHHHTTCCCS---EEEEEGGGG-TTSCCEEEEECH--HHHTTBTTT----
T ss_pred HHHHHHHHcCCEEEEeccccCc-ccCcc-hHHHhcCCCCC---eeeeccccc-CCCCeEEEEECH--HHHHHhccC----
Confidence 6899999999999999999998 54432 11222222222 349999988 799999999987 444321100
Q ss_pred hhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCCCc
Q 047983 82 ISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSEDK 161 (233)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~ 161 (233)
.......+++.++..++++.+.+-....++..++.++.....++.+.+.+...+... ..+..|.|+|
T Consensus 293 ----~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~--~~~~~g~~~~------- 359 (429)
T 4e77_A 293 ----GPVYQAGTLSGNPIAMAAGFACLTEISQVGVYETLTELTDSLATGLRHAAKEENIPL--VVNHVGGMFG------- 359 (429)
T ss_dssp ----SSBCC--CCCCCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTTCCC--EEEEETTEEE-------
T ss_pred ----CCccccCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCce--EEEEeeeEEE-------
Confidence 000111222333333324444331111122333333333333333333333343222 2233466777
Q ss_pred ccccccccc-c-------CCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeecCHHHHHHHHHHHHHHHHH
Q 047983 162 CLLKLNYSL-L-------EGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAVEPSAFEIGLGRMKAFYYR 228 (233)
Q Consensus 162 ~~~~~~~~~-~-------~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~~~~~l~~~~~~l~~~l~~ 228 (233)
+.++... . .+.......+.+.|.++||.+.|+.. ..+|+++..+++++++++++|.+++++
T Consensus 360 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~----~~~~~~~~~t~e~i~~~l~~l~~~l~~ 428 (429)
T 4e77_A 360 --LFFTNADTVTCYQDVMNCDVERFKRFFHLMLEEGVYLAPSAF----EAGFMSLAHSNEDIQKTVNAARRCFAK 428 (429)
T ss_dssp --EECCSSSCCCSHHHHHTSCHHHHHHHHHHHHHTTEECCSSTT----SCEECCTTCCHHHHHHHHHHHHHHHTT
T ss_pred --EEEccCcccccccccccccHHHHHHHHHHHHHCCeEEeecCC----CCEEEeccCCHHHHHHHHHHHHHHHHh
Confidence 3332110 0 00000123444555577999999752 467787777999999999999988753
No 136
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.65 E-value=9.5e-17 Score=137.30 Aligned_cols=183 Identities=13% Similarity=0.102 Sum_probs=117.9
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccc-cchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQD-LGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~-~~~~~~ 79 (233)
++|+++|++||++||+||+|+.+..+ .++..++ ..+++.|+||.++.++ |+||+++++ ++++. +.
T Consensus 167 ~~i~~~~~~~~~~li~D~a~~~~~~~----~~~~~~~---~di~~~s~sK~~~~~~-~~G~~~~~~--~~~~~~~~---- 232 (371)
T 2e7j_A 167 KKIAKVCSEYDVPLLVNGAYAIGRMP----VSLKEIG---ADFIVGSGHKSMAASG-PIGVMGMKE--EWAEIVLR---- 232 (371)
T ss_dssp HHHHHHHHTTTCCEEEECTTTBTTBC----CCHHHHT---CSEEEEEHHHHSSCCS-SCEEEEECT--TTTTTTTC----
T ss_pred HHHHHHHHHcCCeEEEECccccCCCC----CChhhcC---CCEEEecCCcCCCCCC-CcEEEEEec--hhhhhhcc----
Confidence 37899999999999999999985432 1232222 3389999999877654 999999988 44432 11
Q ss_pred hhhhhHHhhhh-hhh---h-ccCcchH-HHHHHHHhhhcHHHHHHHHHHHH--HHHHHHHHHHhhcCCCcccccCCC--c
Q 047983 80 HSISLNMRMDD-YLL---L-SESVYTT-VGAVPQILEKTEEEFFSKITDIL--REAADICCDRLKEIPCITCPKKPE--G 149 (233)
Q Consensus 80 ~~~~~~~~~~~-~~~---~-~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~l~~~L~~~~~~~~~~~~~--~ 149 (233)
.... ... + ...++.. ..++...++. ... +.++.+ +++++++.+.|+++ ++.. ..|. .
T Consensus 233 -------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~-~~~---~~~~~~~~~~~~~~l~~~L~~~-~~~~-~~~~~~~ 299 (371)
T 2e7j_A 233 -------RSEKYKNKEVELLGCTARGATIITLMASFPH-VRE---RIKRWDEEVEKARRFAAEMEKL-GIKQ-LGDNPHN 299 (371)
T ss_dssp -------BCSSCTTSBGGGTTCCCCSHHHHHHHHHHHH-HHH---HGGGHHHHHHHHHHHHHHHHHT-TCEE-ESSSSCC
T ss_pred -------ccccCcccccccccCCcCHHHHHHHHHHHHH-HHH---HHHHHHHHHHHHHHHHHHHHHc-CcEE-ecCCCcc
Confidence 1111 000 0 1112222 1222222211 111 566777 88889999999887 5554 3342 3
Q ss_pred cEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC------CCcEE-EEee---cCHHHHHHHH
Q 047983 150 SMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL------KDWLR-ITFA---VEPSAFEIGL 219 (233)
Q Consensus 150 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~------~~~~R-l~~~---~~~~~l~~~~ 219 (233)
+.++| ++++ +..+ +.+.|.++||.+.| ..|.. .+++| ++++ .+++++++++
T Consensus 300 ~~~~~---------~~~~--------~~~~-~~~~l~~~gi~~~~-~~~~~~~~g~~~~~iRii~~~~~~~~~~~i~~~~ 360 (371)
T 2e7j_A 300 HDLMF---------FHAE--------VLYE-ISKKAKGGRFFLYR-ELKSRKIHGIKPGLTRYFKLSTYGLSDEEVDYVL 360 (371)
T ss_dssp SSEEE---------EECH--------HHHH-HHHHSSSGGGHHHH-HHHHTTEECSCTTCCSEEEEECTTCCHHHHHHHH
T ss_pred CceEE---------EECC--------CHHH-HHHHHHHCCEEEEe-ccccccccCCCCCceEEEEeeccCCCHHHHHHHH
Confidence 55788 4443 1344 44455588999998 55532 68999 9999 5899999999
Q ss_pred HHHHHHHHHH
Q 047983 220 GRMKAFYYRH 229 (233)
Q Consensus 220 ~~l~~~l~~~ 229 (233)
++|.++++++
T Consensus 361 ~~l~~~~~~~ 370 (371)
T 2e7j_A 361 NAFKEIIEKY 370 (371)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHhc
Confidence 9999998764
No 137
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.65 E-value=6.2e-16 Score=131.88 Aligned_cols=188 Identities=12% Similarity=-0.043 Sum_probs=116.0
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHS 81 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~ 81 (233)
+|+++|++||++||+|++|..+...... .+...+..... +++.|+||.++.++. ||+++++ ++++. +
T Consensus 162 ~l~~~~~~~~~~li~D~a~~~~~~~~~~-~~~~~~~~~~d-~~~~s~sK~~~~~~g--g~~~~~~--~l~~~---~---- 228 (359)
T 3pj0_A 162 KISEYCHEQGISLHLDGARLWEITPFYQ-KSAEEICALFD-SVYVSFYKGIGGIAG--AILAGND--DFVQE---A---- 228 (359)
T ss_dssp HHHHHHHHHTCEEEEEETTCGGGHHHHT-CCHHHHHTTCS-EEEEESSSTTCCSSC--EEEEECH--HHHHH---H----
T ss_pred HHHHHHHHcCCEEEEECcchhcchhhhC-CCHHHhhccCC-EEEEeccccCCCcce--EEEECCH--HHHHH---H----
Confidence 5699999999999999998765421101 11211212122 445699998777643 7888776 34421 1
Q ss_pred hhhHHhhhhhhhhccCcchHH--HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCC
Q 047983 82 ISLNMRMDDYLLLSESVYTTV--GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSE 159 (233)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~ 159 (233)
...+.....+.....+. .+...+ +... +..+.+.++++.+.+.|++++++.....|.+++|+|
T Consensus 229 ----~~~~~~~~~~~~~~~~~~~a~~~~l-----~~~~-~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~----- 293 (359)
T 3pj0_A 229 ----KIWKRRYGGDLISLYPYILSADYYF-----EKRI-GKMAEYFEAAKGLAERFNSCSGVKTVPEVPVSNMFH----- 293 (359)
T ss_dssp ----HHHHHHTTCCCSCCHHHHHHHHHHH-----HHHG-GGHHHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEE-----
T ss_pred ----HHHHHHhCCCcchhHHHHHHHHHHH-----HHHH-HHhHHHHHHHHHHHHHHhhCCCceeeccCCcceEEE-----
Confidence 12121111122222222 222222 1222 333456888899999999987776423566788888
Q ss_pred CcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC--CCcEEEEee-----cCHHHHHHHHHHHHHH
Q 047983 160 DKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL--KDWLRITFA-----VEPSAFEIGLGRMKAF 225 (233)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~~Rl~~~-----~~~~~l~~~~~~l~~~ 225 (233)
++++.+. . .+.+.+.+.|.++||.+.||..|+. .+++|++++ .+.+++++++++|.+.
T Consensus 294 ----~~~~~~~--~--~~~~~l~~~l~~~GV~v~~g~~~~~~~~~~~r~~i~~~~~~~~~e~l~~~l~~l~~~ 358 (359)
T 3pj0_A 294 ----VYFENSA--D--EIGAILTKIQDETGVGISGYLQEKSADVCAFEVSVGDAFAEIPAKNLELVFRCLEKE 358 (359)
T ss_dssp ----EEESSCH--H--HHHHHHHHHHHHHCEECCSCCEEEETTEEEEEEECCTTGGGSCHHHHHHHHHHHHHH
T ss_pred ----EEecCcc--c--hhHHHHHHHHHhcCcEecCCccccCCCceEEEEEecCccccCCHHHHHHHHHHHHhc
Confidence 5554321 0 1356677778889999999988864 468999887 3788999999999765
No 138
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.65 E-value=1.3e-14 Score=125.53 Aligned_cols=203 Identities=8% Similarity=-0.100 Sum_probs=123.0
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhh--
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAF-- 78 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~-- 78 (233)
++|+++|++||+++|+||+++... .+..+ ...+..+++.|++|.++. +.++||+++++ ++++.+.-.+
T Consensus 158 ~~i~~l~~~~~~~li~Dea~~~~~----~~~~~---~~~~~d~~~~s~~K~l~~-~~g~g~~~~~~--~~~~~~~~~~~~ 227 (411)
T 3nnk_A 158 AELGEICRRYDALFYTDATASLGG----NPLET---DVWGLDAVSAGMQKCLGG-PSGTSPITLSA--RMEEAIRRRKCV 227 (411)
T ss_dssp TTHHHHHHHHTCEEEEECTTTBTT----BCCCT---TTTTCSEEECCSTTTTCC-CSSEEEEEECH--HHHHHHHTTCCC
T ss_pred HHHHHHHHHcCCEEEEECCcccCC----cccch---hccCCcEEEecCccccCC-CCceEEEEECH--HHHHHHhhcccc
Confidence 579999999999999999987521 11112 222445899999997332 33589999987 4442111000
Q ss_pred ----------------hhhhhhH-Hhhh---hhhhhc-cCcchHH-HHHHHHhhhcHHHH-HHHHHHHHHHHHHHHHHHh
Q 047983 79 ----------------FHSISLN-MRMD---DYLLLS-ESVYTTV-GAVPQILEKTEEEF-FSKITDILREAADICCDRL 135 (233)
Q Consensus 79 ----------------~~~~~~~-~~~~---~~~~~~-~~~~~~~-~~~~~~l~~~~~~~-~~~~~~~~~~~~~~l~~~L 135 (233)
..+.... .... ...... .+.+... .++...++ ...++ +++.++.++++++++.+.|
T Consensus 228 ~~~~~g~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~-~~~~~g~~~~~~~~~~~~~~l~~~L 306 (411)
T 3nnk_A 228 EEGIRTDAHRDGDEEMIYSNYFDLGMVMDYWGPERLNHHTEATTALFGARECAR-LILQEGLDYGIARHKLHGDALVKGI 306 (411)
T ss_dssp CGGGCCTTCCCCSSCCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHH-HHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccCCCCcccccchHHHHhhhccccCCCCCCCHHHHHHHHHHHH-HHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 0000000 0000 000011 1122222 33333332 22333 7889999999999999999
Q ss_pred hcCCCcccccCCCc---cEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEe-ec-
Q 047983 136 KEIPCITCPKKPEG---SMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITF-AV- 210 (233)
Q Consensus 136 ~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~-~~- 210 (233)
+++ ++.. ..+.+ +.++| +.++. +. +..++...+++++||.+.||......+++|+++ +.
T Consensus 307 ~~~-g~~~-~~~~~~~~~~~~~---------~~~~~----~~-~~~~l~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~ 370 (411)
T 3nnk_A 307 QAM-GLET-FGDLKHKMNNVLG---------VVIPQ----GI-NGDQARKLMLEDFGIEIGTSFGPLHGKVWRIGTMGYN 370 (411)
T ss_dssp HHT-TCCB-CSCGGGBCSSEEE---------EECCT----TC-CHHHHHHHHHHHHSEEEEECCGGGTTTEEEEECCGGG
T ss_pred HHc-CCEe-CCCcccccccEEE---------EECCC----CC-CHHHHHHHHHHhcCeEEeCccCCCCCCEEEEeCccCc
Confidence 887 5543 33443 66777 44432 11 355566666666699999986555578999998 52
Q ss_pred -CHHHHHHHHHHHHHHHHHHh
Q 047983 211 -EPSAFEIGLGRMKAFYYRHA 230 (233)
Q Consensus 211 -~~~~l~~~~~~l~~~l~~~~ 230 (233)
+++++++++++|.+++++..
T Consensus 371 ~~~~~i~~~~~~l~~~l~~~~ 391 (411)
T 3nnk_A 371 ARKDCVMTTLSALEAVLNYLK 391 (411)
T ss_dssp CSHHHHHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHHHHHcC
Confidence 78999999999999998753
No 139
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.65 E-value=2.3e-15 Score=132.79 Aligned_cols=194 Identities=16% Similarity=0.089 Sum_probs=121.0
Q ss_pred ChHHHHHHHcCcEEEEccccC-ccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYG-HLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~-~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|.++|++||++||+||+|. ++.+.+..+.++. . .-+++.|+||.+ +|+|.||+++++ ++.+. +
T Consensus 203 ~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~~~~---~--~di~~~s~sK~l--~G~~gG~i~~~~--~~~~~---l-- 268 (447)
T 3h7f_A 203 AAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSPVP---H--ADVVSTTVHKTL--GGGRSGLIVGKQ--QYAKA---I-- 268 (447)
T ss_dssp HHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTT---T--CSEEEEESSGGG--CCCSCEEEEECG--GGHHH---H--
T ss_pred HHHHHHHHHcCCEEEEECCchhhhhcCCCCCCCCC---C--CcEEEecCCcCC--CCCCeEEEEECH--HHHHH---H--
Confidence 378999999999999999974 4555543322221 1 127799999986 488999999987 34321 1
Q ss_pred hhhhhHHhhhhhhhhccCcchH-HHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcC----CCcccccCCCccEEEE
Q 047983 80 HSISLNMRMDDYLLLSESVYTT-VGAVPQILEKTEEEFFSKITDILREAADICCDRLKEI----PCITCPKKPEGSMFVM 154 (233)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~~~~~~g~~~~ 154 (233)
.........+ +++.. ..+++..+.....+++++.++.+.++++.+.+.|++. +++.....+.+++++|
T Consensus 269 ------~~~~~~~~~~-~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~~~~~~~~ 341 (447)
T 3h7f_A 269 ------NSAVFPGQQG-GPLMHVIAGKAVALKIAATPEFADRQRRTLSGARIIADRLMAPDVAKAGVSVVSGGTDVHLVL 341 (447)
T ss_dssp ------HHHHTTTTCS-SCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHTSHHHHHTTCEEGGGSCSSSEEE
T ss_pred ------hhhcCCcccC-CccHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHhccccCCCeEEecCCCCCCEEE
Confidence 1111111112 22222 2333322222223466888899999999999999775 2444333345677888
Q ss_pred EecCCCcccccccccccCCCCChHHHHHHHHhccCEEEE----CCcccCC--CCcEEEEee------cCHHHHHHHHHHH
Q 047983 155 YCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVL----PGITVGL--KDWLRITFA------VEPSAFEIGLGRM 222 (233)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~----pg~~f~~--~~~~Rl~~~------~~~~~l~~~~~~l 222 (233)
+.+... +. +.+.+.++|+++||.+. |+..+++ .+++|++.. .++++++++++.|
T Consensus 342 ---------~~~~~~---~~--~~~~~~~~l~~~GI~v~~~~i~~~~~~p~~~~~lRig~~~~~~~~~~~eei~~~~~~l 407 (447)
T 3h7f_A 342 ---------VDLRDS---PL--DGQAAEDLLHEVGITVNRNAVPNDPRPPMVTSGLRIGTPALATRGFGDTEFTEVADII 407 (447)
T ss_dssp ---------EECTTS---SC--CHHHHHHHHHHTTEECBC-------------CEEEEECHHHHHHTCCHHHHHHHHHHH
T ss_pred ---------EEcCCC---CC--CHHHHHHHHHHCCeEEecccCCCCCCCCCCCCceeccCHHHhhCCCCHHHHHHHHHHH
Confidence 433211 12 56777888888999998 6643333 678999875 3578999999999
Q ss_pred HHHHHHH
Q 047983 223 KAFYYRH 229 (233)
Q Consensus 223 ~~~l~~~ 229 (233)
.+++.+.
T Consensus 408 ~~~l~~~ 414 (447)
T 3h7f_A 408 ATALATG 414 (447)
T ss_dssp HHHHHSG
T ss_pred HHHHhcc
Confidence 9888654
No 140
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.65 E-value=3.1e-15 Score=127.78 Aligned_cols=192 Identities=16% Similarity=-0.005 Sum_probs=119.6
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|+++|++||+ ||+|++|+... .+..+. ..+..+++.|+||.++.+| +|++++++.. .++ ...
T Consensus 158 ~~i~~l~~~~~~-li~D~a~~~~~----~~~~~~---~~~~d~~~~s~~K~~g~~g--~g~~~~~~~~-~~~--~~~--- 221 (382)
T 4hvk_A 158 EEISEVLAGKAA-LHIDATASVGQ----IEVDVE---KIGADMLTISSNDIYGPKG--VGALWIRKEA-KLQ--PVI--- 221 (382)
T ss_dssp HHHHHHHSSSSE-EEEECTTTBTT----BCCCHH---HHTCSEEEEESGGGTSCTT--CEEEEEETTC-CCC--CSS---
T ss_pred HHHHHHHHHcCE-EEEEhHHhcCC----CCCCch---hcCCCEEEEeHHHhcCCCc--eEEEEEcCcc-CcC--ccc---
Confidence 378999999999 99999987421 111221 1234589999999877666 7777777632 111 111
Q ss_pred hhhhHHhhhhhhhh-ccCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCc---cEEEEE
Q 047983 81 SISLNMRMDDYLLL-SESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEG---SMFVMY 155 (233)
Q Consensus 81 ~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~---g~~~~~ 155 (233)
......... ....+... .++...+. ...+++++.++.++++++++.+.|++++++.. ..+.+ +.+++
T Consensus 222 -----~~~~~~~~~~~~~~~~~~~~~~~~al~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~~~~~- 293 (382)
T 4hvk_A 222 -----LGGGQENGLRSGSENVPSIVGFGKAAE-ITAMEWREEAERLRRLRDRIIDNVLKIEESYL-NGHPEKRLPNNVN- 293 (382)
T ss_dssp -----CSSCTGGGTSCSCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEE-CSCSSSBCTTEEE-
T ss_pred -----ccCCCcCccccCCcCHHHHHHHHHHHH-HHHhhHHHHHHHHHHHHHHHHHHHhcCCCeEE-eCCccccCCCEEE-
Confidence 000000111 11122222 33323222 23457889999999999999999998877764 33433 23444
Q ss_pred ecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC-------------------CCcEEEEeec--CHHH
Q 047983 156 CGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL-------------------KDWLRITFAV--EPSA 214 (233)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~-------------------~~~~Rl~~~~--~~~~ 214 (233)
+.++ +. +.+.+.+.|.++||.+.||+.|+. .+++|++++. ++++
T Consensus 294 --------~~~~-----~~--~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~t~e~ 358 (382)
T 4hvk_A 294 --------VRFS-----YI--EGESIVLSLDMAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDED 358 (382)
T ss_dssp --------EEET-----TC--CHHHHHHHHHHTTCBCBCC--------CCCHHHHHTTCCHHHHHTEEEEECCTTCCHHH
T ss_pred --------EEEC-----CC--CHHHHHHHHHHCCEEEeeCCccCCCCCcchHHHHHcCCChhhcCCeEEEEcCCCCCHHH
Confidence 3332 11 344455667788999999987753 4789999995 7899
Q ss_pred HHHHHHHHHHHHHHHhh
Q 047983 215 FEIGLGRMKAFYYRHAK 231 (233)
Q Consensus 215 l~~~~~~l~~~l~~~~~ 231 (233)
+++++++|++++++..+
T Consensus 359 i~~~~~~l~~~~~~~~~ 375 (382)
T 4hvk_A 359 VDRLLEVLPGVIERLRS 375 (382)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999988754
No 141
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.65 E-value=2.6e-15 Score=130.36 Aligned_cols=192 Identities=14% Similarity=0.113 Sum_probs=124.4
Q ss_pred ChHHHHHHHcCcEEEEccccC-ccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYG-HLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~-~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|.++|++||++||+||+|. ++.+.+..+.++. ...+++.|+||.+ +|+|.||++++++ .+.
T Consensus 182 ~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~-----~~di~~~s~sK~l--~g~~~G~~~~~~~-~~~-------- 245 (417)
T 3n0l_A 182 AKFREIADEIGAYLFADIAHIAGLVVAGEHPSPFP-----YAHVVSSTTHKTL--RGPRGGIIMTNDE-ELA-------- 245 (417)
T ss_dssp HHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCCTT-----TCSEEEEESSTTT--CSCSCEEEEESCH-HHH--------
T ss_pred HHHHHHHHHcCCEEEEECccchhhhhcccCCCccc-----cceEEEeeCcccc--CCCCeeEEEECCH-HHH--------
Confidence 378999999999999999964 5555543332222 2338899999975 7889999999842 233
Q ss_pred hhhhhHHhhhhhhh--hccCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEe
Q 047983 80 HSISLNMRMDDYLL--LSESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYC 156 (233)
Q Consensus 80 ~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~ 156 (233)
..+..... ...+++... .+++..+.....+++.+.++.+.++++.+.+.|++. ++.....+..+.++|
T Consensus 246 ------~~~~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~-- 316 (417)
T 3n0l_A 246 ------KKINSAIFPGIQGGPLMHVIAAKAVGFKFNLSDEWKVYAKQVRTNAQVLANVLMDR-KFKLVSDGTDNHLVL-- 316 (417)
T ss_dssp ------HHHHHHHTTTTCSSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEE--
T ss_pred ------HHHhhhhCCcccCCcHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC-CceeccCCCCceEEE--
Confidence 23322211 112223322 333333322233566888899999999999999884 554323334566778
Q ss_pred cCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC------CCcEEEEeec------CHHHHHHHHHHHHH
Q 047983 157 GSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL------KDWLRITFAV------EPSAFEIGLGRMKA 224 (233)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~------~~~~Rl~~~~------~~~~l~~~~~~l~~ 224 (233)
+.++.. +. +...+.++|+++||.+.++..+.. .+.+|+++.. +++++++++++|.+
T Consensus 317 -------~~~~~~---~~--~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~i~~~~~~l~~ 384 (417)
T 3n0l_A 317 -------MSFLDR---EF--SGKDADLALGNAGITANKNTVPGEIRSPFITSGLRLGTPALTARGFKEKEMEIVSNYIAD 384 (417)
T ss_dssp -------EECTTS---SS--CHHHHHHHHHHTTEECEECCCTTCCSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHH
T ss_pred -------EEcccC---CC--CHHHHHHHHHHcCeEEeccccCCCCcccCCCCeeEecCHHHhhCCCCHHHHHHHHHHHHH
Confidence 444311 11 566777888899999997653321 3569998762 47899999999999
Q ss_pred HHHHH
Q 047983 225 FYYRH 229 (233)
Q Consensus 225 ~l~~~ 229 (233)
++++.
T Consensus 385 ~l~~~ 389 (417)
T 3n0l_A 385 ILDDV 389 (417)
T ss_dssp HHHTT
T ss_pred HHhcc
Confidence 88653
No 142
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.65 E-value=8.8e-16 Score=135.33 Aligned_cols=187 Identities=11% Similarity=0.130 Sum_probs=114.5
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCC-ceEEEEEecCCCccccccchhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
+|.++|++||++||+||+|.+|.+++... .+...+....++ |+||.++ +| +|+||+++++ ++++. +.
T Consensus 248 ~l~~l~~~~gillI~DEv~~g~g~~g~~~-~~~~~~~~~Di~---t~sK~l~-~G~~~~G~v~~~~--~~~~~--l~--- 315 (439)
T 2oat_A 248 GVRELCTRHQVLFIADEIQTGLARTGRWL-AVDYENVRPDIV---LLGKALS-GGLYPVSAVLCDD--DIMLT--IK--- 315 (439)
T ss_dssp HHHHHHHHTTCEEEEECTTTTTTTTSSSS-GGGGGTCCCSEE---EECGGGG-TTSSCCEEEEECH--HHHTT--SC---
T ss_pred HHHHHHHHcCCEEEEeccccCCccCCcch-hHHHhCCCCcEE---Eeccccc-CCCCCeEEEEECH--HHHhc--cC---
Confidence 68999999999999999999876655321 112222222233 9999977 48 9999999987 44432 11
Q ss_pred hhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccc-cCCCccEEEEEecCC
Q 047983 81 SISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCP-KKPEGSMFVMYCGSE 159 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~g~~~~~~~~~ 159 (233)
......+++.++..++++.+.+ +. ..+ ....+.++++++++.+.|+++ +.... ..+..|.++|
T Consensus 316 ------~~~~~~t~~~~~~~~aaa~aal-~~-~~~--~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~~~~g~~~~----- 379 (439)
T 2oat_A 316 ------PGEHGSTYGGNPLGCRVAIAAL-EV-LEE--ENLAENADKLGIILRNELMKL-PSDVVTAVRGKGLLNA----- 379 (439)
T ss_dssp ------TTSSCCSSTTCHHHHHHHHHHH-HH-HHH--TTHHHHHHHHHHHHHHHHTTS-CTTTEEEEEEETTEEE-----
T ss_pred ------CCCcccCCCcCHHHHHHHHHHH-HH-Hhh--hhHHHHHHHHHHHHHHHHHHh-cCCCcEEEEeeeeEEE-----
Confidence 1111122332222222333333 21 111 246678888899999999886 22211 1223466677
Q ss_pred CcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEee--cCHHHHHHHHHHHHHHHHH
Q 047983 160 DKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFA--VEPSAFEIGLGRMKAFYYR 228 (233)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~--~~~~~l~~~~~~l~~~l~~ 228 (233)
+.++... +. +..++..+ |.++||.+.|+. .+++|+++. .+++++++++++|.+++++
T Consensus 380 ----v~l~~~~--~~-~~~~l~~~-l~~~Gv~v~~~~----~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 438 (439)
T 2oat_A 380 ----IVIKETK--DW-DAWKVCLR-LRDNGLLAKPTH----GDIIRFAPPLVIKEDELRESIEIINKTILS 438 (439)
T ss_dssp ----EEECCCS--SC-CHHHHHHH-HHHTTEECCBSS----SSEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred ----EEEecCc--cH-HHHHHHHH-HHHCCeEEecCC----CCEEEEECccCCCHHHHHHHHHHHHHHHHh
Confidence 4443210 01 24445544 456799999852 589999776 4899999999999988754
No 143
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.65 E-value=5.7e-15 Score=128.54 Aligned_cols=190 Identities=13% Similarity=0.073 Sum_probs=120.2
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|+++|++||++||+||+|+... .+..+ ...+..+++.|+||.++.+| +||+++++ ...+. +.
T Consensus 183 ~~i~~l~~~~~~~li~Dea~~~~~----~~~~~---~~~~~di~~~s~sK~~g~~g--~G~~~~~~--~~~~~--~~--- 246 (423)
T 3lvm_A 183 AAIGEMCRARGIIYHVDATQSVGK----LPIDL---SQLKVDLMSFSGHKIYGPKG--IGALYVRR--KPRVR--IE--- 246 (423)
T ss_dssp HHHHHHHHHHTCEEEEECTTTTTT----SCCCT---TTSCCSEEEEESTTTTSCSS--CEEEEECB--TTBCC--CC---
T ss_pred HHHHHHHHHcCCEEEEEhhhhcCC----CCcCh---hhcCCCEEEechHHhcCCCC--eEEEEEec--cccCC--CC---
Confidence 378999999999999999987622 11112 22244588999999888777 99999987 33322 11
Q ss_pred hhhhHHhhh---hhhhh-ccCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCc---cEE
Q 047983 81 SISLNMRMD---DYLLL-SESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEG---SMF 152 (233)
Q Consensus 81 ~~~~~~~~~---~~~~~-~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~---g~~ 152 (233)
.... ..... ....+... .++...+. ...+++++.++.++++++.+.+.|++++++.. ..+.+ +.+
T Consensus 247 -----~~~~~~~~~~~~~~~~~~~~~~~a~~~al~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~~~ 319 (423)
T 3lvm_A 247 -----AQMHGGGHERGMRSGTLPVHQIVGMGEAYR-IAKEEMATEMERLRGLRNRLWNGIKDIEEVYL-NGDLEHGAPNI 319 (423)
T ss_dssp -----CSSCSSCTTTTTCCSCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEE-ESCSTTBCTTE
T ss_pred -----ccccCCcccccccCCCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEE-eCCccccCCCe
Confidence 0000 00011 11222222 33323222 22344788999999999999999988877764 33332 223
Q ss_pred EEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC-------------------CCcEEEEeec--C
Q 047983 153 VMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL-------------------KDWLRITFAV--E 211 (233)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~-------------------~~~~Rl~~~~--~ 211 (233)
++ +.++ +. +...+.+.|.+ |.+.+|..|.+ .+++|++++. +
T Consensus 320 ~~---------~~~~-----~~--~~~~l~~~l~~--i~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~t 381 (423)
T 3lvm_A 320 LN---------VSFN-----YV--EGESLIMALKD--LAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTT 381 (423)
T ss_dssp EE---------EEET-----TS--CHHHHHHHTTT--EECBCCCC-----CCCCHHHHHHTCCHHHHHTEEEEECCTTCC
T ss_pred EE---------EEeC-----CC--CHHHHHHHHhh--heeccCccccCCCccccHHHHHhCCCccccCceEEEECCCCCC
Confidence 33 2232 11 34444455555 99999877543 3899999995 7
Q ss_pred HHHHHHHHHHHHHHHHHHhh
Q 047983 212 PSAFEIGLGRMKAFYYRHAK 231 (233)
Q Consensus 212 ~~~l~~~~~~l~~~l~~~~~ 231 (233)
++++++++++|.+++++..+
T Consensus 382 ~e~i~~~~~~l~~~~~~~~~ 401 (423)
T 3lvm_A 382 EEEIDYTIELVRKSIGRLRD 401 (423)
T ss_dssp HHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHhhc
Confidence 89999999999999987753
No 144
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.64 E-value=3.8e-15 Score=129.33 Aligned_cols=193 Identities=12% Similarity=0.044 Sum_probs=121.2
Q ss_pred ChHHHHHHHcCcEEEEccccCc-cccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGH-LVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~-~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|+++|++||++||+||+|.. +..++..+..+. ...+++.|+||.++ |.|.||+++++. + + .+.
T Consensus 187 ~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~-----~~di~~~s~sK~~~--g~~gg~~~~~~~--~-~--~~~-- 252 (420)
T 3gbx_A 187 AKMREIADSIGAYLFVDMAHVAGLIAAGVYPNPVP-----HAHVVTTTTHKTLA--GPRGGLILAKGG--D-E--ELY-- 252 (420)
T ss_dssp HHHHHHHHHTTCEEEEECTTTHHHHHTTSSCCSTT-----TSSEEEEESSGGGC--SCSCEEEEESSC--C-H--HHH--
T ss_pred HHHHHHHHHcCCEEEEECCcchhceecccCCcccc-----cCCEEEeecccCCC--CCCceEEEEcCC--c-H--HHH--
Confidence 3789999999999999999864 333332222221 13388999999875 455599999861 1 0 122
Q ss_pred hhhhhHHhhhhhhhh--ccCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEe
Q 047983 80 HSISLNMRMDDYLLL--SESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYC 156 (233)
Q Consensus 80 ~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~ 156 (233)
..+...... ..+++... .+++..+.....+++++.++.+.++++.+.+.|++. ++....++.+++++|
T Consensus 253 ------~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~-- 323 (420)
T 3gbx_A 253 ------KKLNSAVFPSAQGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVEVFLNR-GYKVVSGGTENHLFL-- 323 (420)
T ss_dssp ------HHHHHHHC----CCCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEE--
T ss_pred ------HHhhhhcCCCCCCCcchhHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhc-CCeeccCCCCCeEEE--
Confidence 222222111 11222222 333322222234567888999999999999999885 554323335677788
Q ss_pred cCCCcccccccccccCCCCChHHHHHHHHhccCEEEEC-------CcccCCCCcEEEEeec------CHHHHHHHHHHHH
Q 047983 157 GSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLP-------GITVGLKDWLRITFAV------EPSAFEIGLGRMK 223 (233)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~p-------g~~f~~~~~~Rl~~~~------~~~~l~~~~~~l~ 223 (233)
+.++.. + .+.+.+.+.|+++||.+.| |..|+ .+.+|+++.. ++++++++++.|.
T Consensus 324 -------~~~~~~---~--~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~-~~~iRi~~~~~~~~~~~~~~i~~~~~~l~ 390 (420)
T 3gbx_A 324 -------LDLVDK---N--LTGKEADAALGRANITVNKNSVPNDPKSPFV-TSGIRIGSPAVTRRGFKEAEVKELAGWMC 390 (420)
T ss_dssp -------EECGGG---T--CCHHHHHHHHHHTTEECEEECCTTCSSCTTT-CSEEEEECHHHHHTTCCHHHHHHHHHHHH
T ss_pred -------EEcCCC---C--CCHHHHHHHHHHCCcEeccccCCCCccccCC-CcceEEecchhcccCCCHHHHHHHHHHHH
Confidence 444321 1 1566777788889999998 44444 3459999873 3688899999888
Q ss_pred HHHHHH
Q 047983 224 AFYYRH 229 (233)
Q Consensus 224 ~~l~~~ 229 (233)
+++++.
T Consensus 391 ~~l~~~ 396 (420)
T 3gbx_A 391 DVLDNI 396 (420)
T ss_dssp HHHHTT
T ss_pred HHHhCc
Confidence 887653
No 145
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.64 E-value=2.3e-15 Score=129.41 Aligned_cols=193 Identities=11% Similarity=0.112 Sum_probs=116.6
Q ss_pred ChHHHHHH----HcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccch
Q 047983 1 FCIEETTK----KLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGV 76 (233)
Q Consensus 1 ~~i~~l~~----~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~ 76 (233)
++|+++|+ +||+++|+||+|+.. ..+.. +......+++.|+||. ..+|.++||+++++ ++++.+.-
T Consensus 174 ~~i~~l~~~~~~~~~~~li~Dea~~~g----~~~~~---~~~~~~d~~~~s~~K~-~~~~~g~G~~~~~~--~~~~~~~~ 243 (390)
T 1elu_A 174 AEIMAVCRRHQGNYPVRVLVDGAQSAG----SLPLD---FSRLEVDYYAFTGHKW-FAGPAGVGGLYIHG--DCLGEINP 243 (390)
T ss_dssp HHHHHHHHHCCSSSCCEEEEECTTTBT----TBCCC---TTTSCCSEEEEESSST-TCCCTTCEEEEECT--TTGGGCCC
T ss_pred HHHHHHHhhhhhhcCcEEEEEcccccC----CcCCC---hhhcCCCEEEcccccc-ccCCCceEEEEECH--HhHhhcCC
Confidence 37899999 999999999999852 11111 2233456889999993 55567799999987 45542211
Q ss_pred hhhh--hh------hhH---HhhhhhhhhccCcchHH-HHHHHHhhhc-HHHHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 047983 77 AFFH--SI------SLN---MRMDDYLLLSESVYTTV-GAVPQILEKT-EEEFFSKITDILREAADICCDRLKEIPCITC 143 (233)
Q Consensus 77 ~~~~--~~------~~~---~~~~~~~~~~~~~~~~~-~~~~~~l~~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 143 (233)
.... +. ... .....+ .. .+++... .++...++.. ...++++.++.++++++++.+.|++++++..
T Consensus 244 ~~~g~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~a~~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~ 321 (390)
T 1elu_A 244 TYVGWRSITYGAKGEPTGWAEGGKRF-EV-ATSAYPQYAGLLAALQLHQRQGTAEERYQAICQRSEFLWRGLNQLPHVHC 321 (390)
T ss_dssp CSCCTTTEEECTTSCEEEECSGGGGG-CC-SCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSTTEEE
T ss_pred ccccCCcccccccCcccccccchHhh-CC-CCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhcCCcEE
Confidence 0000 00 000 000011 11 1122222 3232222211 1235788999999999999999988766654
Q ss_pred cc--CCCccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEee--cCHHHHHHHH
Q 047983 144 PK--KPEGSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFA--VEPSAFEIGL 219 (233)
Q Consensus 144 ~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~--~~~~~l~~~~ 219 (233)
+. ++.++++.| +++. +. +..++..+ |.++||.+.||. ..+++|+++. .+++++++++
T Consensus 322 ~~~~~~~~~~~~~----------~~~~----~~-~~~~~~~~-l~~~gi~v~~~~---~~~~iRis~~~~~~~~~i~~~~ 382 (390)
T 1elu_A 322 LATSAPQAGLVSF----------TVDS----PL-GHRAIVQK-LEEQRIYLRTIA---DPDCIRACCHYITDEEEINHLL 382 (390)
T ss_dssp SCSSCCSSSEEEE----------EECS----SS-CHHHHHHH-HHHTTEECEEET---TTTEEEEECCTTCCHHHHHHHH
T ss_pred ecCccccccEEEE----------EcCC----CC-CHHHHHHH-HHHCCEEEEecC---CCCeEEEecccCCCHHHHHHHH
Confidence 22 235666554 2321 11 24444444 567899999976 3589999986 4899999999
Q ss_pred HHHHH
Q 047983 220 GRMKA 224 (233)
Q Consensus 220 ~~l~~ 224 (233)
++|.+
T Consensus 383 ~~l~~ 387 (390)
T 1elu_A 383 ARLAD 387 (390)
T ss_dssp HHHTT
T ss_pred HHHHh
Confidence 88864
No 146
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.64 E-value=7.6e-16 Score=135.67 Aligned_cols=187 Identities=14% Similarity=0.086 Sum_probs=113.2
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCC-ceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|.++|++||++||+||+|.+|.+.+.. ..+...+....++ |+||.++. | +|+||+++++ ++++
T Consensus 243 ~~l~~l~~~~~~~li~Dev~~~~g~~g~~-~~~~~~~~~~di~---s~sK~l~~-G~~~~G~~~~~~--~~~~------- 308 (449)
T 3a8u_X 243 KRNREICNQHNILLVFDEVITGFGRTGSM-FGADSFGVTPDLM---CIAKQVTN-GAIPMGAVIAST--EIYQ------- 308 (449)
T ss_dssp HHHHHHHHHHTCEEEEECTTTTTTTTSSS-SHHHHHTCCCSEE---EECGGGGT-TSSCCEEEEEEH--HHHH-------
T ss_pred HHHHHHHHHhCCEEEEeccccCccccCcc-hhhhhcCCCCCEE---EEcccccC-CCCceEEEEECH--HHHH-------
Confidence 36899999999999999999987655532 1222222222333 89999874 7 9999999986 3442
Q ss_pred hhhhhHHhhhh------------hhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccc-cC
Q 047983 80 HSISLNMRMDD------------YLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCP-KK 146 (233)
Q Consensus 80 ~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~ 146 (233)
.+.. ..+++.++..++++.+.+ +. ..+ ....+.++++++.+.+.|++++.+... ..
T Consensus 309 -------~l~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal-~~-~~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~ 377 (449)
T 3a8u_X 309 -------TFMNQPTPEYAVEFPHGYTYSAHPVACAAGLAAL-CL-LQK--ENLVQSVAEVAPHFEKALHGIKGAKNVIDI 377 (449)
T ss_dssp -------HHHTCSSCTTSCSSCCCCTTTTCHHHHHHHHHHH-HH-HHH--TTHHHHHHHHHHHHHHHHHTTTTSTTEEEE
T ss_pred -------HhhccCcccccccccccCCCcccHHHHHHHHHHH-HH-HHh--cCHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Confidence 2221 112222222222333332 21 111 245677778888888888765333211 11
Q ss_pred CCccEEEEEecCCCcccccccccccCCCC--ChHHHHHHHHhccCEEEECCcccCCCCcEEEEee--cCHHHHHHHHHHH
Q 047983 147 PEGSMFVMYCGSEDKCLLKLNYSLLEGIN--SDTEFALKLAKEESIIVLPGITVGLKDWLRITFA--VEPSAFEIGLGRM 222 (233)
Q Consensus 147 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~--~~~~~l~~~~~~l 222 (233)
+..|.++| +.++... ... +..++... |.++||.+.|+. +++|+++. .+++++++++++|
T Consensus 378 ~~~g~~~~---------i~~~~~~--~~~~~~~~~~~~~-l~~~Gv~v~~~g-----~~iRis~~~~~t~~~i~~~l~~l 440 (449)
T 3a8u_X 378 RNFGLAGA---------IQIAPRD--GDAIVRPFEAGMA-LWKAGFYVRFGG-----DTLQFGPTFNSKPQDLDRLFDAV 440 (449)
T ss_dssp EEETTEEE---------EEECCBT--TBSSHHHHHHHHH-HHHHTEECEEET-----TEEEECCCTTCCHHHHHHHHHHH
T ss_pred eeeEEEEE---------EEEecCc--ccccccHHHHHHH-HHHCCcEEecCC-----CEEEEECCCcCCHHHHHHHHHHH
Confidence 23467788 5443211 000 01244444 446799999962 79999954 5899999999999
Q ss_pred HHHHHHH
Q 047983 223 KAFYYRH 229 (233)
Q Consensus 223 ~~~l~~~ 229 (233)
.+++++.
T Consensus 441 ~~~l~~~ 447 (449)
T 3a8u_X 441 GEVLNKL 447 (449)
T ss_dssp HHHHHHC
T ss_pred HHHHHHH
Confidence 9998753
No 147
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.64 E-value=5.5e-15 Score=125.65 Aligned_cols=196 Identities=10% Similarity=-0.018 Sum_probs=117.9
Q ss_pred ChHHHHHHHc-CcEEEEccccCccccCCCccccccccCCccCEEEEccCccccC-CCCceEEEEEecCCCccccccchhh
Q 047983 1 FCIEETTKKL-GIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWI-VPGWRLGWLVTSDPNGILQDLGVAF 78 (233)
Q Consensus 1 ~~i~~l~~~~-~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~R~G~~~~~~~~~~~~~~~~~~ 78 (233)
++|.++|++| |+++|+|++|...... ..+. +..+++.|+||.++ .+| +|++++++ ++++++.-..
T Consensus 150 ~~i~~la~~~p~~~li~D~a~~~~~~~----~~~~-----~~d~~~~s~~K~~~~~~G--~g~~~~~~--~~~~~~~~~~ 216 (362)
T 3ffr_A 150 EDINTFRDKNKDALIFVDAVSSLPYPK----FDWT-----KIDSVFFSVQKCFGLPAG--LGVWILND--RVIEKSKALL 216 (362)
T ss_dssp HHHTTSGGGSTTSEEEEECTTTTTSSC----CCTT-----SCSEEEEETTSTTCCCSC--CEEEEEEH--HHHHHHHHHH
T ss_pred HHHHHHHHhCCCCEEEEecccccCCcc----cChh-----HCcEEEEecccccCCCCc--eEEEEECH--HHHHHhhhcc
Confidence 3688999999 9999999999864321 1121 13388999999988 788 46777776 4443211000
Q ss_pred h----hh--hhhHHhhhhh--hhhccCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccC---
Q 047983 79 F----HS--ISLNMRMDDY--LLLSESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKK--- 146 (233)
Q Consensus 79 ~----~~--~~~~~~~~~~--~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~--- 146 (233)
. .+ .+........ .....+++... .++...++......+++.++.++++++.+.+.|++++++..+.+
T Consensus 217 ~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~ 296 (362)
T 3ffr_A 217 AKRKSIGTYHTIPSMLEKARVNQTPETPNAMNIFLLGKVTGDMLQISADGIRKQTEEKAALINTYIESSKVFSFGVEDAK 296 (362)
T ss_dssp HTTCCCCSTTSHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCSSEEESSSCGG
T ss_pred ccCCCCcccccHHHHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccCceeccCChh
Confidence 0 00 0000000000 00011222222 33333332112223678889999999999999998877664221
Q ss_pred CCccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec--CHHHHHHHHHHHHH
Q 047983 147 PEGSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV--EPSAFEIGLGRMKA 224 (233)
Q Consensus 147 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~--~~~~l~~~~~~l~~ 224 (233)
+.+++.+| +.++. +..++... |.++||.+.||..+...+++|+++.. ++++++++++.|++
T Consensus 297 ~~~~~~~~---------~~~~~-------~~~~~~~~-l~~~gi~~~~g~~~~~~~~iRis~~~~~~~e~i~~l~~~l~~ 359 (362)
T 3ffr_A 297 LRSMTTIV---------ANTTM-------LPGEINKI-LEPFDMAVGAGYGSKKETQIRIANFPAHSLEQVHKLVQTLKE 359 (362)
T ss_dssp GBCSSEEE---------EEESS-------CHHHHHHH-HGGGTEEEEECSGGGTTTEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred hcCCceEE---------EecCC-------CHHHHHHH-HHHCCeEEecCccccCCCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 12456677 44431 24555555 45559999999777668899999985 78888888888876
Q ss_pred HH
Q 047983 225 FY 226 (233)
Q Consensus 225 ~l 226 (233)
++
T Consensus 360 ~~ 361 (362)
T 3ffr_A 360 KI 361 (362)
T ss_dssp HT
T ss_pred Hh
Confidence 53
No 148
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.62 E-value=2.4e-14 Score=124.07 Aligned_cols=202 Identities=12% Similarity=0.044 Sum_probs=122.2
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccc-cCCCCceEEEEEecCCCccccccchh--
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKR-WIVPGWRLGWLVTSDPNGILQDLGVA-- 77 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~-~~~~G~R~G~~~~~~~~~~~~~~~~~-- 77 (233)
++|+++|++||+++|+|++|+.... +..+ ...+..+++.|++|. ++.+ ++||+++++ .+++.+.-.
T Consensus 156 ~~i~~l~~~~~~~li~D~a~~~~~~----~~~~---~~~~~d~~~~s~~K~l~g~~--g~g~~~~~~--~~~~~~~~~~~ 224 (416)
T 3isl_A 156 KAIGEACRTEDALFIVDAVATIGGC----EVKV---DEWKIDAAIGGTQKCLSVPS--GMAPITYNE--RVADVIAARKK 224 (416)
T ss_dssp HHHHHHHHHTTCEEEEECTTTTTTS----CCCT---TTTTCSEEECCSSSTTCCCS--SEEEEEECH--HHHHHHHTC--
T ss_pred HHHHHHHHHcCCEEEEECCccccCC----Ccch---hhcCCCEEEecCccccCCCC--CeEEEEECH--HHHHHhhcccc
Confidence 3789999999999999999874221 1112 222345889999996 4444 589999987 444321100
Q ss_pred ------------------hhhhhhhH-Hhhh---hhhhhcc-CcchHH-HHHHHHhhhcHHHH-HHHHHHHHHHHHHHHH
Q 047983 78 ------------------FFHSISLN-MRMD---DYLLLSE-SVYTTV-GAVPQILEKTEEEF-FSKITDILREAADICC 132 (233)
Q Consensus 78 ------------------~~~~~~~~-~~~~---~~~~~~~-~~~~~~-~~~~~~l~~~~~~~-~~~~~~~~~~~~~~l~ 132 (233)
........ .... ....+.. +.+... .++...+. ...++ +++.++.++++++++.
T Consensus 225 ~~~Gw~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~-~~~~~g~~~~~~~~~~~~~~l~ 303 (416)
T 3isl_A 225 VERGIATQADRAALSGNRPITSNYFDLSQLEDYWSERRLNHHTEATTMLYALREGVR-LVLEEGLETRFERHRHHEAALA 303 (416)
T ss_dssp ----------------CCCCSCSTTCHHHHHHHTSTTCCCSSCCCHHHHHHHHHHHH-HHHHHCHHHHHHHHHHHHHHHH
T ss_pred ccccccccccchhccCCCCCCccccchHHHHhhhcccCCCCCCCCHHHHHHHHHHHH-HHHHhhHHHHHHHHHHHHHHHH
Confidence 00000000 0000 0011111 122222 33333332 23344 7889999999999999
Q ss_pred HHhhcCCCcccccCCCc---cEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEee
Q 047983 133 DRLKEIPCITCPKKPEG---SMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFA 209 (233)
Q Consensus 133 ~~L~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~ 209 (233)
+.|+++ ++.. ..|.+ +.+++ +.++.. . +..++...+++++||.+.||......+++|+++.
T Consensus 304 ~~L~~~-g~~~-~~~~~~~~~~~~~---------~~~~~~----~-~~~~l~~~L~~~~gi~v~~g~~~~~~~~iRi~~~ 367 (416)
T 3isl_A 304 AGIKAM-GLRL-FGDDSCKMPVVTC---------VEIPGG----I-DGESVRDMLLAQFGIEIASSFGPLAGKIWRIGTM 367 (416)
T ss_dssp HHHHHT-TCCB-CSCGGGBCTTEEE---------EECCTT----C-CHHHHHHHHHHHHCEECBCCCSTTTTTEEEEECC
T ss_pred HHHHHc-CCEe-ccCccccCCcEEE---------EeCCCC----C-CHHHHHHHHHHhCCEEEecCCCCCCCCEEEEecc
Confidence 999886 5554 34443 55666 444321 1 3556666665566999999875555789999994
Q ss_pred ---cCHHHHHHHHHHHHHHHHHHh
Q 047983 210 ---VEPSAFEIGLGRMKAFYYRHA 230 (233)
Q Consensus 210 ---~~~~~l~~~~~~l~~~l~~~~ 230 (233)
.+++++++++++|.++++++.
T Consensus 368 ~~~~~~e~i~~~~~~l~~~~~~~~ 391 (416)
T 3isl_A 368 GYSCRKENVLFVLAGLEAVLLRHN 391 (416)
T ss_dssp GGGCSHHHHHHHHHHHHHHHHHTT
T ss_pred cCCCcHHHHHHHHHHHHHHHHHcC
Confidence 245559999999999998763
No 149
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.62 E-value=4.9e-16 Score=136.33 Aligned_cols=196 Identities=13% Similarity=0.081 Sum_probs=110.7
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|.++|++||++||+||+|++| ..+.. ..+...+.... +.|+||.++. |+|+||+++++ ++++.+.-.
T Consensus 227 ~~l~~l~~~~g~~lI~DEv~~g~-~~g~~-~~~~~~~~~~d---i~s~sK~l~~-G~~~G~v~~~~--~~~~~l~~~--- 295 (434)
T 2epj_A 227 AALQRLSRESGALLILDEVVTGF-RLGLE-GAQGYFNIEGD---IIVLGKIIGG-GFPVGAVAGSR--EVMSLLTPQ--- 295 (434)
T ss_dssp HHHHHHHHHHTCEEEEEETTTTT-TSSTT-HHHHHHTCCCS---EEEEEGGGGT-TSSCEEEEECH--HHHTTBTTT---
T ss_pred HHHHHHHHHcCCEEEEEcchhce-eCCcc-hhhHHhCCCCC---eeeecchhcC-CcceeeeeecH--HHHHhhccC---
Confidence 36899999999999999999987 43321 11111221122 3499999886 99999999987 444321000
Q ss_pred hhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCC---CcccccCCCccEEEEEec
Q 047983 81 SISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIP---CITCPKKPEGSMFVMYCG 157 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~---~~~~~~~~~~g~~~~~~~ 157 (233)
.......+++.++..++++.+.+ +. .++ .+..+.++++++++.+.|+++. ++.....+ .|.++|
T Consensus 296 -----~~~~~~~t~~~~~~~~aa~~a~l-~~-~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~-~g~~~~--- 362 (434)
T 2epj_A 296 -----GKVFNAGTFNAHPITMAAGLATL-KA-LEE--EPVYSVSREAAKALEEAASEVLDRTGLPYTINR-VESMMQ--- 362 (434)
T ss_dssp -----SSBCCCCTTTTCHHHHHHHHHHH-HH-HHH--SCHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEE-ETTEEE---
T ss_pred -----CCcccCCCCCcCHHHHHHHHHHH-HH-HHh--cCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEE-eeeEEE---
Confidence 00001112222222322333332 21 111 3345666666666666665531 22111233 455677
Q ss_pred CCCcccccccccccC-------CCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeecCHHHHHHHHHHHHHHHHHHh
Q 047983 158 SEDKCLLKLNYSLLE-------GINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAVEPSAFEIGLGRMKAFYYRHA 230 (233)
Q Consensus 158 ~~~~~~~~~~~~~~~-------~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~~~~~l~~~~~~l~~~l~~~~ 230 (233)
+.++..... ........+.+.|.++||.+.||.. .++|+++..+++++++++++|.+++++..
T Consensus 363 ------i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~----~~~~~~~~~t~e~i~~~l~~l~~~l~~~~ 432 (434)
T 2epj_A 363 ------LFIGVEEVSNAAQARKADKKFYVKLHEEMLRRGVFIAPSNL----EAVFTGLPHQGEALEIAVEGLRSSLKTVL 432 (434)
T ss_dssp ------EEETCSCCSSHHHHTTSCHHHHHHHHHHHHHTTEECCSSTT----SCEECCTTCSHHHHHHHHHHHHHHHHHHH
T ss_pred ------EEEeCCCcccchhccccCHHHHHHHHHHHHHCCeEEeccCC----CcEEEeccCCHHHHHHHHHHHHHHHHHHh
Confidence 443310000 0000233444555578999999752 46788877799999999999999998764
No 150
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.62 E-value=5e-15 Score=126.17 Aligned_cols=191 Identities=16% Similarity=0.008 Sum_probs=116.8
Q ss_pred HHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhhhhhhH
Q 047983 6 TTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHSISLN 85 (233)
Q Consensus 6 l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (233)
++++||++||+||+|+.+... .++..+ + +++.|+||.++.+| +||+++++ ++++.+.-. ..-...
T Consensus 161 i~~~~~~~li~D~a~~~~~~~----~~~~~~---d--i~~~s~sK~~~~~G--~G~~~~~~--~~~~~~~~~--~~~~~~ 225 (360)
T 1w23_A 161 FPEINHAPLIADMSSDILSRP----LKVNQF---G--MIYAGAQKNLGPSG--VTVVIVKK--DLLNTKVEQ--VPTMLQ 225 (360)
T ss_dssp CCCCCSSCEEEECTTTTTSSC----CCGGGC---S--EEEEETTTTTSCTT--CEEEEEEH--HHHCSCCTT--CCGGGC
T ss_pred ccccCCceEEEechhhcCCCC----cCcccC---C--EEEEEcccccCCCC--cEEEEEcH--HHHhhcccC--Ccchhh
Confidence 344799999999999875321 223222 2 78999999998777 99999987 454321110 000000
Q ss_pred Hhhhhhhhhcc-CcchHH-HHHHHHhhhcHHH-HHHHHHHHHHHHHHHHHHHhhcCCCc-ccccCC--CccEEEEEecCC
Q 047983 86 MRMDDYLLLSE-SVYTTV-GAVPQILEKTEEE-FFSKITDILREAADICCDRLKEIPCI-TCPKKP--EGSMFVMYCGSE 159 (233)
Q Consensus 86 ~~~~~~~~~~~-~~~~~~-~~~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~~~-~~~~~~--~~g~~~~~~~~~ 159 (233)
........... +++... .++...++...+. .++++++.++++++++.+.|++++++ ..+..| .+++++|
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~----- 300 (360)
T 1w23_A 226 YATHIKSDSLYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDESNGFYVGHAEKGSRSLMNVT----- 300 (360)
T ss_dssp HHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTTTSSEESSCGGGBCSSEEE-----
T ss_pred hhhhhhccCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHccCcccccCCchhccCcEEE-----
Confidence 00000001111 122222 3333333221222 57889999999999999999988644 321123 3566888
Q ss_pred CcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec--CHHHHHHHHHHHHHHHHH
Q 047983 160 DKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV--EPSAFEIGLGRMKAFYYR 228 (233)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~--~~~~l~~~~~~l~~~l~~ 228 (233)
+.++.. .+...+.+.|.++||.+.||..+ .+++|++++. +++++++++++|++++++
T Consensus 301 ----~~~~~~------~~~~~~~~~l~~~gi~~~~~~~~--~~~iRis~~~~~~~~~i~~~~~~l~~~~~~ 359 (360)
T 1w23_A 301 ----FNLRNE------ELNQQFLAKAKEQGFVGLNGHRS--VGGCRASIYNAVPIDACIALRELMIQFKEN 359 (360)
T ss_dssp ----EECSSH------HHHHHHHHHHHHTTEESCBCCTT--TCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred ----EEcCCC------ccHHHHHHHHHHCCeeeecCCCC--CCeEEEEecCCCCHHHHHHHHHHHHHHHhh
Confidence 544311 12333444567889999998765 5899999994 788999999999988754
No 151
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.61 E-value=2.5e-15 Score=133.22 Aligned_cols=183 Identities=10% Similarity=0.048 Sum_probs=111.1
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHS 81 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~ 81 (233)
+|.++|++||++||+||+|.+|.+++.. ..+...+...+++ ||||.++...+|+||+++++ +++
T Consensus 259 ~l~~l~~~~gillI~DEv~~g~gr~G~~-~a~~~~~~~pdii---t~sK~l~gG~~~lG~v~~~~--~i~---------- 322 (457)
T 3tfu_A 259 DLRDICRRYEVLLIFDEIATGFGRTGAL-FAADHAGVSPDIM---CVGKALTGGYLSLAATLCTA--DVA---------- 322 (457)
T ss_dssp HHHHHHHHHTCEEEEECTTTTTTTTSSS-STHHHHTCCCSEE---EECGGGGTTSSCCEEEEEEH--HHH----------
T ss_pred HHHHHHHHcCCEEEEEcCccCCccccch-hHhHhcCCCceEE---EEChhhhCCCcceEEEEEcH--HHH----------
Confidence 6899999999999999999998766532 1222223333334 99998654337999999987 343
Q ss_pred hhhHHhhh--------hhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcC---CCcccccCCCcc
Q 047983 82 ISLNMRMD--------DYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEI---PCITCPKKPEGS 150 (233)
Q Consensus 82 ~~~~~~~~--------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---~~~~~~~~~~~g 150 (233)
..+. ...+++.++..++++++.+ +...+ +...+.++++.+++.+.|+++ +.+.. ..+. |
T Consensus 323 ----~~~~~~~~~~~~~~~t~~~n~~a~aaa~aaL-~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~v~~-vr~~-G 392 (457)
T 3tfu_A 323 ----HTISAGAAGALMHGPTFMANPLACAVSVASV-ELLLG---QDWRTRITELAAGLTAGLDTARALPAVTD-VRVC-G 392 (457)
T ss_dssp ----HHHHHSSSCSCCCCCTTTTCHHHHHHHHHHH-HHHHT---SCHHHHHHHHHHHHHHHHGGGGGSTTEEE-EEEC-S
T ss_pred ----HHhhccCCCceeEecCCCcCHHHHHHHHHHH-HHHhh---hHHHHHHHHHHHHHHHHHHHHhcCCCeee-eecC-C
Confidence 2221 1122333333333444443 11111 234555666666666666654 33322 2344 5
Q ss_pred EEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEee--cCHHHHHHHHHHHHHHHHH
Q 047983 151 MFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFA--VEPSAFEIGLGRMKAFYYR 228 (233)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~--~~~~~l~~~~~~l~~~l~~ 228 (233)
.+++ +.++.+ . +...+.+.|.++||.+.|.. +++|++.. .+++++++++++|.+++++
T Consensus 393 ~~~~---------i~l~~~----~--~~~~~~~~l~~~Gv~v~~~~-----~~lRi~p~~~~t~eei~~~l~~L~~~l~~ 452 (457)
T 3tfu_A 393 AIGV---------IECDRP----V--DLAVATPAALDRGVWLRPFR-----NLVYAMPPYICTPAEITQITSAMVEVARL 452 (457)
T ss_dssp SCEE---------EEESSC----C--CHHHHHHHHHHTTEECCCBT-----TEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred eEEE---------EEECCc----c--cHHHHHHHHHHCCeEEEecC-----CEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 5666 444321 1 23444444556799999843 78999854 4899999999999999986
Q ss_pred Hh
Q 047983 229 HA 230 (233)
Q Consensus 229 ~~ 230 (233)
..
T Consensus 453 ~~ 454 (457)
T 3tfu_A 453 VG 454 (457)
T ss_dssp C-
T ss_pred hc
Confidence 54
No 152
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.61 E-value=4.2e-15 Score=126.22 Aligned_cols=183 Identities=9% Similarity=-0.022 Sum_probs=112.1
Q ss_pred ChHHHHHHHcCcEEEEccccCcccc--CCCccccccccCCccCEEEEccCccccCCCCceEE--EEEecCCCccccccch
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVF--GNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLG--WLVTSDPNGILQDLGV 76 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~--~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G--~~~~~~~~~~~~~~~~ 76 (233)
++|+++|++||++||+||+|..+.. .+..+ ....+.....++ +.|+||. + .|+| |+++++ ++++.+
T Consensus 163 ~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~-~~~~~~~~~d~~-~~s~sK~-g---~~~G~g~~~~~~--~~~~~~-- 232 (356)
T 1v72_A 163 EAIGDVCKSSSLGLHMDGSRFANALVSLGCSP-AEMTWKAGVDAL-SFGATKN-G---VLAAEAIVLFNT--SLATEM-- 232 (356)
T ss_dssp HHHHHHHHHTTCEEEEEETTHHHHHHHHTCCT-TTTTGGGTCCEE-EECCGGG-T---CSSCEEEEESSG--GGHHHH--
T ss_pred HHHHHHHHHcCCeEEEEchhhHhHhccCCCCH-HHhhhhhcCCEE-EEecccC-C---CcCccEEEEECH--HHHhhH--
Confidence 3689999999999999999986532 22211 111111122334 4589997 4 3556 888765 444311
Q ss_pred hhhhhhhhHHhhhhhhhhccCcchHHH--HHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEE
Q 047983 77 AFFHSISLNMRMDDYLLLSESVYTTVG--AVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVM 154 (233)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~ 154 (233)
........ ......... .....++. ....+..+.++++++++.+.|++++++.. ..|.+++++|
T Consensus 233 ---------~~~~~~~~-~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~l~~~L~~~~g~~~-~~~~~~~~~~ 298 (356)
T 1v72_A 233 ---------SYRRKRAG-HLSSKMRFLSAQIDAYLTD---DLWLRNARKANAAAQRLAQGLEGLGGVEV-LGGTEANILF 298 (356)
T ss_dssp ---------HHHHHHTT-CCCSSTHHHHHHHHHHTST---THHHHHHHHHHHHHHHHHHHHTTCTTEEE-ESCCCSSEEE
T ss_pred ---------HHHhhccC-chhhhHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHHHHHhhCCCcEE-ccCCCccEEE
Confidence 11111111 111112211 12222222 22334567778899999999988767764 4677889999
Q ss_pred EecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec--CHHHHHHHHHHHHHHHHHH
Q 047983 155 YCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV--EPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~--~~~~l~~~~~~l~~~l~~~ 229 (233)
++++ .++..+ |.++||.+.||. |+ .+++|+++.. +++++++++++|.+++++.
T Consensus 299 ---------~~~~----------~~~~~~-l~~~gi~v~~g~-~~-~~~iRi~~~~~~~~~~i~~~~~~l~~~l~~~ 353 (356)
T 1v72_A 299 ---------CRLD----------SAMIDA-LLKAGFGFYHDR-WG-PNVVRFVTSFATTAEDVDHLLNQVRLAADRT 353 (356)
T ss_dssp ---------EEEC----------HHHHHH-HHHTTCBCBCSS-SS-TTEEEEECCTTCCHHHHHHHHHHHHHTC---
T ss_pred ---------EEcC----------HHHHHH-HHhcCeEEeccc-cC-CCeEEEEecCCCCHHHHHHHHHHHHHHHHhh
Confidence 4442 244444 567799999987 65 7899999773 7899999999999887654
No 153
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.61 E-value=4e-15 Score=131.43 Aligned_cols=185 Identities=15% Similarity=0.132 Sum_probs=110.4
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccc--hhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLG--VAF 78 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~--~~~ 78 (233)
++|.++|++||+++|+||+|+++.++|.. ..+...+....+ .|+||.+ |+||+++++ ++++.+. +.
T Consensus 255 ~~l~~l~~~~g~lli~DEv~~g~g~~g~~-~~~~~~~~~~di---~t~sK~l-----~iG~~~~~~--~~~~~l~~~~~- 322 (449)
T 2cjg_A 255 AAMRELCDEFDALLIFDEVQTGCGLTGTA-WAYQQLDVAPDI---VAFGKKT-----QVCGVMAGR--RVDEVADNVFA- 322 (449)
T ss_dssp HHHHHHHHHTTCEEEEECTTTTTTTTSSS-STHHHHTCCCSE---EEECGGG-----SSEEEEECG--GGGGSTTCTTT-
T ss_pred HHHHHHHHHCCcEEEEeccccCCCccCcc-eeecccCCCceE---EEecCcc-----cEEEEEECH--HHhhhhhhccc-
Confidence 36899999999999999999998776642 122222222233 3789986 799999987 4543210 01
Q ss_pred hhhhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhc----CCC-cccccCCCccEEE
Q 047983 79 FHSISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKE----IPC-ITCPKKPEGSMFV 153 (233)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~-~~~~~~~~~g~~~ 153 (233)
.......+++.++..+.++.+.+ +. ..+ ....+.++++++++.+.|++ ++. +.. ..+.|. |+
T Consensus 323 -------~~~~~~~t~~~n~~~~~aa~aal-~~-~~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~-~~~~g~-~~ 389 (449)
T 2cjg_A 323 -------VPSRLNSTWGGNLTDMVRARRIL-EV-IEA--EGLFERAVQHGKYLRARLDELAADFPAVVLD-PRGRGL-MC 389 (449)
T ss_dssp -------STTSSCCSSSSCHHHHHHHHHHH-HH-HHH--HTHHHHHHHHHHHHHHHHHHHHHHSTTTSEE-EEEETT-EE
T ss_pred -------CCcccccCCCCCHHHHHHHHHHH-HH-HHh--ccHHHHHHHHHHHHHHHHHHHHhhCCCceee-EeeccE-EE
Confidence 11111122333333332444443 21 111 23556677777777777765 343 322 345444 55
Q ss_pred EEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEee--cCHHHHHHHHHHHHHHHHHH
Q 047983 154 MYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFA--VEPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~--~~~~~l~~~~~~l~~~l~~~ 229 (233)
+ +.++... +..++..+++ ++||.+.|+. .+++|+++. .+++++++++++|.+++++.
T Consensus 390 ~---------~~~~~~~-----~~~~~~~~l~-~~Gv~v~~~g----~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~ 448 (449)
T 2cjg_A 390 A---------FSLPTTA-----DRDELIRQLW-QRAVIVLPAG----ADTVRFRPPLTVSTAEIDAAIAAVRSALPVV 448 (449)
T ss_dssp E---------EECSSHH-----HHHHHHHHHH-HTTEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred E---------EEECChH-----HHHHHHHHHH-HCCeEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence 6 3332110 1344555555 6899999963 489999654 58999999999999998753
No 154
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.60 E-value=2.2e-14 Score=127.94 Aligned_cols=200 Identities=15% Similarity=0.102 Sum_probs=125.6
Q ss_pred ChHHHHHHHcCcEEEEccccC-ccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYG-HLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~-~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|.++|+++|++||+|++|. ++.+.+....++. . ..+++.|++|.+ +|+|.||+++++. +.. +. . .
T Consensus 211 ~~i~~ia~~~g~~livD~ah~~g~~~~~~~~~p~~---~--~div~~s~~K~l--~GprgG~i~~~~~--~~~-~~-~-~ 278 (483)
T 1rv3_A 211 GRLRKIADENGAYLMADMAHISGLVVAGVVPSPFE---H--CHVVTTTTHKTL--RGCRAGMIFYRRG--VRS-VD-P-K 278 (483)
T ss_dssp HHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGGG---T--CSEEEEESSGGG--CCCSCEEEEEECS--BCC-------
T ss_pred HHHHHHHHHcCCEEEEEccchhcccccCCCCCCCC---C--CcEEEecCcccC--CCCCceEEEEcch--hhh-hc-c-c
Confidence 378999999999999999987 4444443333332 1 227889999975 5888999999873 220 00 0 0
Q ss_pred hhh----hhHHhhhhhhh--hccCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCC-CccE
Q 047983 80 HSI----SLNMRMDDYLL--LSESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKP-EGSM 151 (233)
Q Consensus 80 ~~~----~~~~~~~~~~~--~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~g~ 151 (233)
+.. .....+..... ...+++... .+++..++......+++.++.+.++++.+.+.|+++ ++.. ..+ .+.+
T Consensus 279 ~g~~~~y~~~~~~~~~~~~~~~g~~~~~~iaal~~Al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~~~~~~ 356 (483)
T 1rv3_A 279 TGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFKEYQRQVVANCRALSAALVEL-GYKI-VTGGSDNH 356 (483)
T ss_dssp ---CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEE-GGGSCSSS
T ss_pred cCcchhhHHHHHhhhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhc-CCEe-ccCCCCCc
Confidence 000 00022222111 111222222 444433322223456888999999999999999887 5554 333 2456
Q ss_pred EEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEE----CCcccC-CCCcEEEEeec--C----HHHHHHHHH
Q 047983 152 FVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVL----PGITVG-LKDWLRITFAV--E----PSAFEIGLG 220 (233)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~----pg~~f~-~~~~~Rl~~~~--~----~~~l~~~~~ 220 (233)
++| +.+... ++ +.+.+.+.|.+.||.+. ||.... ..+++|+++.. + +++++++++
T Consensus 357 ~~~---------v~~~~~---g~--~~~~~~~~L~~~gI~v~~~~~pg~~~~~~~~~iRis~~~~~t~g~~~edi~~~~~ 422 (483)
T 1rv3_A 357 LIL---------VDLRSK---GT--DGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEKDFQKVAH 422 (483)
T ss_dssp EEE---------EEGGGG---TC--CHHHHHHHHHHTTEECEEECCSSCSCTTSCCEEEEECHHHHHTTCCHHHHHHHHH
T ss_pred eEE---------EeccCC---CC--CHHHHHHHHHhCCcEEecCCCCCCCcCCCCceEEeecCCcccCCCCHHHHHHHHH
Confidence 778 444321 22 44556777888999999 987322 25799999985 5 799999999
Q ss_pred HHHHHHHH
Q 047983 221 RMKAFYYR 228 (233)
Q Consensus 221 ~l~~~l~~ 228 (233)
.|.++++.
T Consensus 423 ~l~~~l~~ 430 (483)
T 1rv3_A 423 FIHRGIEL 430 (483)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99998876
No 155
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.60 E-value=2.5e-14 Score=122.46 Aligned_cols=199 Identities=13% Similarity=0.079 Sum_probs=116.6
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccC-CCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWI-VPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|+++|++||+++|+|++|+.+... ..+ ...+..+++.|+||.++ .+| +|++++++ .+++.+.-.+.
T Consensus 164 ~~i~~l~~~~~~~li~D~~~~~~~~~----~~~---~~~~~d~~~~s~~K~l~~~~G--~g~~~~~~--~~~~~~~~~~~ 232 (376)
T 3f0h_A 164 MMIGEFCKKNNMFFVCDCVSAFLADP----FNM---NECGADVMITGSQKVLACPPG--ISVIVLAP--RGVERVEKSKV 232 (376)
T ss_dssp HHHHHHHHHTTCEEEEECTTTTTTSC----CCH---HHHTCSEEEEETTTTTCCCSS--CEEEEECH--HHHHHHHTCCC
T ss_pred HHHHHHHHHcCCEEEEEcCccccCcc----ccc---cccCccEEEecCcccccCCCc--eEEEEECH--HHHHHhhcCCC
Confidence 37899999999999999999874322 112 12223488999999987 667 57788876 44432110000
Q ss_pred hh--hhhHHhhhhhh-hhccCcchH-H-HHHHHHhhhcHHH-HHHHHHHHHHHHHHHHHHHhhcCCCcccccCCC--ccE
Q 047983 80 HS--ISLNMRMDDYL-LLSESVYTT-V-GAVPQILEKTEEE-FFSKITDILREAADICCDRLKEIPCITCPKKPE--GSM 151 (233)
Q Consensus 80 ~~--~~~~~~~~~~~-~~~~~~~~~-~-~~~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~--~g~ 151 (233)
.+ .+......... ..+...++. . .++...+..-.+. .+++.++.++++++++.+.|++++ +.. ..+. ..+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~~-~~~~~~~~~ 310 (376)
T 3f0h_A 233 RTMYFDLKDALKNQERGQTPFTPAVGILLQINERLKEIKKHGGADAEVARIASQAADFRAKIKDLP-FEL-VSESPANGV 310 (376)
T ss_dssp CCSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTTSS-EEE-CCSSBBTTE
T ss_pred CceeecHHHHHhhcccCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHcC-Ccc-CccccCceE
Confidence 00 00000000000 001112222 1 2222222111122 478888999999999999998873 332 2222 233
Q ss_pred EEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec--CHHHHHHHHHHHHHHHHH
Q 047983 152 FVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV--EPSAFEIGLGRMKAFYYR 228 (233)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~--~~~~l~~~~~~l~~~l~~ 228 (233)
+.+ .+. +. +..++...++++.||.+.||......+++|+++.. +++++++++++|.+++++
T Consensus 311 ~~~-----------~~~----~~-~~~~l~~~l~~~~gi~v~~g~~~~~~~~lRis~~~~~t~e~i~~~~~~l~~~l~~ 373 (376)
T 3f0h_A 311 TSV-----------HPT----TA-NAYDIFLKLKDEYGIWICPNGGEMKDTIFRVGHIGALTHEDNTTLVNAFKDLQKR 373 (376)
T ss_dssp EEE-----------EES----SS-CHHHHHHHHHHHSSEECEECCGGGTTTCEEEECCSSCCHHHHHHHHHHHHHHHHT
T ss_pred EEE-----------eCC----CC-CHHHHHHHHHHhCCEEEecCccccCCCEEEEecCCCCCHHHHHHHHHHHHHHHHh
Confidence 333 221 11 34555555555559999998554457899999973 899999999999998864
No 156
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.60 E-value=2.4e-15 Score=132.64 Aligned_cols=193 Identities=11% Similarity=0.011 Sum_probs=106.5
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|.++|++||++||+||+|+++ ..+.. ..+...+.... +.|+||.++. |+|+||+++++ ++++.+.-.
T Consensus 225 ~~l~~l~~~~g~~lI~DEv~~g~-~~g~~-~~~~~~~~~~d---i~s~sK~l~~-G~~~G~v~~~~--~~~~~l~~~--- 293 (453)
T 2cy8_A 225 REGAELARQYGALFILDEVISGF-RVGNH-GMQALLDVQPD---LTCLAKASAG-GLPGGILGGRE--DVMGVLSRG--- 293 (453)
T ss_dssp HHHHHHHHHTTCEEEEECTTTTT-TTCTT-HHHHHHTCCCS---EEEEEGGGGT-TSSCEEEEECH--HHHTTSSSC---
T ss_pred HHHHHHHHHcCCEEEEecCcccc-ccCch-hhhHHhCCCCc---EEEEChhhhC-CcceEEEechH--HHHHHhccc---
Confidence 36899999999999999999988 54421 11211221122 3499999885 99999999987 455321100
Q ss_pred hhhhHHhhhhhhhhccCcchHHHHHHHHhhh-cHHHHHHHHHHHHHHHHHHHHHHhhcC----CCcccccCCCccEEEEE
Q 047983 81 SISLNMRMDDYLLLSESVYTTVGAVPQILEK-TEEEFFSKITDILREAADICCDRLKEI----PCITCPKKPEGSMFVMY 155 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~~~~~~g~~~~~ 155 (233)
.........+++.++..+.++.+.+ +. . .+...+.++++++++.+.|+++ +... ..++ .|.++|
T Consensus 294 ---~~~~~~~~~t~~~n~~~~aa~~aal-~~~~----~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~~~~-~g~~~~- 362 (453)
T 2cy8_A 294 ---SDRKVLHQGTFTGNPITAAAAIAAI-DTIL----EDDVCAKINDLGQFAREAMNHLFARKGLNW-LAYG-RFSGFH- 362 (453)
T ss_dssp ---C---------CCCCHHHHHHHHHHH-HHHH----HTTHHHHHHHHHHHHHHHHHHHHHHTTCCE-EEEC-CTTEEE-
T ss_pred ---cCCCceeCCCCCCCHHHHHHHHHHH-HHHh----hhhHHHHHHHHHHHHHHHHHHHHhhCCCcE-EEEE-eeeEEE-
Confidence 0000111122333333332333333 21 1 1234455566666666666542 3222 1334 455777
Q ss_pred ecCCCcccccccc-----c----ccCC---C--CChHHHHHHHHhccCEEEECCcccCCCCcEEEEeecCHHHHHHHHHH
Q 047983 156 CGSEDKCLLKLNY-----S----LLEG---I--NSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAVEPSAFEIGLGR 221 (233)
Q Consensus 156 ~~~~~~~~~~~~~-----~----~~~~---~--~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~~~~~l~~~~~~ 221 (233)
+.++. . .... . .+..++... |.++||.+.|+ +.+|+++..+++++++++++
T Consensus 363 --------i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-l~~~Gv~v~~~------~~~~l~~~~t~~~i~~~l~~ 427 (453)
T 2cy8_A 363 --------LMPGLPPNTTDTGSITRAEVARPDVKMIAAMRMA-LILEGVDIGGR------GSVFLSAQHEREHVEHLVTT 427 (453)
T ss_dssp --------EEETSCTTCCCCHHHHTTCSCCCCHHHHHHHHHH-HHHTTEECBTT------TEEECCTTCCHHHHHHHHHH
T ss_pred --------EEEeccccccccccccccccccccHHHHHHHHHH-HHHCCeEEeCC------CCEEeeccCCHHHHHHHHHH
Confidence 44431 0 0000 0 012344444 45679999664 24778766799999999999
Q ss_pred HHHHHHHHh
Q 047983 222 MKAFYYRHA 230 (233)
Q Consensus 222 l~~~l~~~~ 230 (233)
|.+++++..
T Consensus 428 l~~~l~~~~ 436 (453)
T 2cy8_A 428 FDRVLDRLA 436 (453)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999998764
No 157
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.59 E-value=1.5e-15 Score=132.81 Aligned_cols=187 Identities=15% Similarity=0.044 Sum_probs=106.3
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHS 81 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~ 81 (233)
+|.++ ++||++||+||+|++| ..+.. ..+...+.... +.|+||.++. |+|+||+++++ ++++.+ .
T Consensus 224 ~l~~l-~~~g~~lI~DEv~~g~-~~g~~-~~~~~~~~~~d---i~s~sK~l~~-G~~~G~~~~~~--~~~~~~--~---- 288 (424)
T 2e7u_A 224 ALHEA-KAYGVLLIADEVMTGF-RLAFG-GATELLGLKPD---LVTLGKILGG-GLPAAAYAGRR--EIMEKV--A---- 288 (424)
T ss_dssp HHHHG-GGGTCEEEEECTTTTT-TSSTT-HHHHHHTCCCS---EEEECGGGGT-TSSCEEEEECH--HHHTTB--T----
T ss_pred HHHHH-HHcCCEEEEecCcccc-ccchh-HHHHHhCCCcc---hhhhhhhhhC-CcceEEEEEcH--HHHhhh--c----
Confidence 68899 9999999999999988 44421 11111222222 3399999885 99999999987 454321 1
Q ss_pred hhhHHhhh--hhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcC----CCcccccCCCccEEEEE
Q 047983 82 ISLNMRMD--DYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEI----PCITCPKKPEGSMFVMY 155 (233)
Q Consensus 82 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~~~~~~g~~~~~ 155 (233)
.... ...+++.++..++++.+.+ +. .++ ..+..+.++++++++.+.|+++ +... ..++ .|.++|
T Consensus 289 ----~~~~~~~~~t~~~~~~~~aaa~aal-~~-~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~~~~-~g~~~~- 358 (424)
T 2e7u_A 289 ----PLGPVYQAGTLSGNPLAMAAGLATL-EL-LEE-NPGYYAYLEDLGARLEAGLKEVLKEKGLPH-TVNR-VGSMIT- 358 (424)
T ss_dssp ----TTSSBCCCCTTCSCHHHHHHHHHHH-HH-HHH-CTHHHHHHHHHHHHHHHHHHHHHHHTTCCC-EEEE-ETTEEE-
T ss_pred ----ccCCcccCCCCCCCHHHHHHHHHHH-HH-HHh-ccHHHHHHHHHHHHHHHHHHHHHHhCCCce-EEEe-eceEEE-
Confidence 1000 1112233333332333333 21 111 1445666677777777777553 3221 1234 355777
Q ss_pred ecCCCcccccccccccC-------CCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeecCHHHHHHHHHHHHHH
Q 047983 156 CGSEDKCLLKLNYSLLE-------GINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAVEPSAFEIGLGRMKAF 225 (233)
Q Consensus 156 ~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~~~~~l~~~~~~l~~~ 225 (233)
+.++..... ........+.+.|.++||.+.||.. .++|+++..+++++++++++|.++
T Consensus 359 --------i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~----~~~~~~~~~t~~~i~~~l~~l~~~ 423 (424)
T 2e7u_A 359 --------VFFTEGPVVTFQDARRTDTELFKRFFHGLLDRGIYWPPSNF----EAAFLSVAHREEDVEKTLEALRKA 423 (424)
T ss_dssp --------EESSSSCCCSHHHHTTSCHHHHHHHHHHHHTTTEECCSSSS----SCEECCTTCCHHHHHHHHHHHHHH
T ss_pred --------EEEeCCCCcchhhhcccCHHHHHHHHHHHHHCCeEEeccCC----CceEeeccCCHHHHHHHHHHHHHh
Confidence 433210000 0000123344445578999999752 457888777999999999999875
No 158
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.58 E-value=2e-14 Score=123.32 Aligned_cols=197 Identities=15% Similarity=0.128 Sum_probs=118.1
Q ss_pred ChHHHHHHHc--CcEEEEccccCccccCCCccccccccCCccCEEEEccCcccc-CCCCceEEEEEecCCCcccc-ccch
Q 047983 1 FCIEETTKKL--GIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRW-IVPGWRLGWLVTSDPNGILQ-DLGV 76 (233)
Q Consensus 1 ~~i~~l~~~~--~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~R~G~~~~~~~~~~~~-~~~~ 76 (233)
++|+++|++| |++||+||+|+... .+.++ ...+..+++.|+||.+ +.+|+ ||+++++ .+++ .+.-
T Consensus 157 ~~i~~~~~~~~~~~~li~D~a~~~~~----~~~~~---~~~~~d~~~~s~~K~~~~~~G~--G~~~~~~--~~~~~~l~~ 225 (385)
T 2bkw_A 157 KAISQAIKQTSPETFFVVDAVCSIGC----EEFEF---DEWGVDFALTASQKAIGAPAGL--SISLCSS--RFMDYALND 225 (385)
T ss_dssp HHHHHHHHHHCTTSEEEEECTTTTTT----SCCCT---TTTTCSEEEEESSSTTCCCSCE--EEEEECH--HHHHHHTCH
T ss_pred HHHHHHHHhhCCCCEEEEECccccCC----ccccc---cccCceEEEecCccccccCCcc--eEEEEcH--HHHHHHHhh
Confidence 3789999999 99999999998421 11122 2224458899999954 45775 9999987 3432 1100
Q ss_pred h---h--hhhh---hhHHhhhhhhh---h-ccCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHh-hcCCCcc
Q 047983 77 A---F--FHSI---SLNMRMDDYLL---L-SESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRL-KEIPCIT 142 (233)
Q Consensus 77 ~---~--~~~~---~~~~~~~~~~~---~-~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L-~~~~~~~ 142 (233)
. . .... ........+.. . ..+.+... .++...++......+++.++.++++++++.+.| +++ ++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-g~~ 304 (385)
T 2bkw_A 226 SKNGHVHGYFSSLRRWTPIMENYEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWDLHREMSDWFKDSLVNGL-QLT 304 (385)
T ss_dssp HHHCCCSCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTTT-CCE
T ss_pred ccCCCCCceeecHHHHhhHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHhc-Cce
Confidence 0 0 0000 00000001110 0 01222222 333333321112226778899999999999999 887 555
Q ss_pred cccCC-----CccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC-CCcEEEE-ee-----c
Q 047983 143 CPKKP-----EGSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL-KDWLRIT-FA-----V 210 (233)
Q Consensus 143 ~~~~~-----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~-~~~~Rl~-~~-----~ 210 (233)
. ..| ..+.++| ++++ +..++. +.|.++||.+.||..+.. .+++|++ ++ .
T Consensus 305 ~-~~~~~~~~~~~~~~~---------~~~~--------~~~~~~-~~l~~~gi~v~~g~~~~~~~~~iRis~~~~~~~~~ 365 (385)
T 2bkw_A 305 S-VSRYPSNMSAHGLTA---------VYVA--------DPPDVI-AFLKSHGVVIAGGIHKDIGPKYIRIGHMGVTACNK 365 (385)
T ss_dssp E-SSCSSSTTBCSSCEE---------EECS--------CHHHHH-HHHHHTTEECBCCCCTTTGGGEEEECCCGGGTSST
T ss_pred e-cccCcccccCCceEE---------EecC--------CHHHHH-HHHHHCCeEEeCCCCcccCCCEEEEEccccccccC
Confidence 3 332 2467778 4443 133444 445678999999887643 5799999 76 3
Q ss_pred CHHHHHHHHHHHHHHHHH
Q 047983 211 EPSAFEIGLGRMKAFYYR 228 (233)
Q Consensus 211 ~~~~l~~~~~~l~~~l~~ 228 (233)
+++++++++++|.+++++
T Consensus 366 ~~e~i~~~~~~l~~~~~~ 383 (385)
T 2bkw_A 366 NLPYMKNCFDLIKLALQR 383 (385)
T ss_dssp TCTHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHHHHh
Confidence 788999999999988754
No 159
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.58 E-value=2.4e-14 Score=124.12 Aligned_cols=191 Identities=12% Similarity=0.036 Sum_probs=113.6
Q ss_pred cCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh------hhhh
Q 047983 10 LGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF------HSIS 83 (233)
Q Consensus 10 ~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~------~~~~ 83 (233)
+|+++|+||+|..+... ..+. +..+++.|+||.++.+| ++||+++++ ++++.+.-.+. .-.+
T Consensus 191 ~~~~vivD~a~~~~~~~----~~~~-----~~di~~~s~sK~~~~~g-g~g~l~~~~--~~~~~l~~~~~~~~~~~~~~~ 258 (398)
T 2fyf_A 191 DDALVVIDATSGAGGLP----VDIA-----ETDAYYFAPQKNFASDG-GLWLAIMSP--AALSRIEAIAATGRWVPDFLS 258 (398)
T ss_dssp C-CEEEEECTTTTTTSC----CCGG-----GCSEEEECTTSTTCSCS-SEEEEEECH--HHHHHHHHHHHTTCCCCGGGC
T ss_pred cCCeEEEEeccccCCcc----cCcc-----cCcEEEEecCcccCCCC-ceEEEEECH--HHHHHhhcccccCCCCCcEEe
Confidence 89999999999875421 1221 13378999999998886 599999987 44432100000 0000
Q ss_pred hHHhhhhh-hhhc-cCcchHH-HHHHHHhhhcHHHH--HHHHHHHHHHHHHHHHHHhhcCCCccccc-CC--CccEEEEE
Q 047983 84 LNMRMDDY-LLLS-ESVYTTV-GAVPQILEKTEEEF--FSKITDILREAADICCDRLKEIPCITCPK-KP--EGSMFVMY 155 (233)
Q Consensus 84 ~~~~~~~~-~~~~-~~~~~~~-~~~~~~l~~~~~~~--~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~--~~g~~~~~ 155 (233)
........ .... .+++... .++...++ ...++ +++.++.++++++++.+.|++++++..+. .| .+++++|
T Consensus 259 ~~~~~~~~~~~~~~~t~~~~~~~a~~~al~-~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~- 336 (398)
T 2fyf_A 259 LPIAVENSLKNQTYNTPAIATLALLAEQID-WLVGNGGLDWAVKRTADSSQRLYSWAQERPYTTPFVTDPGLRSQVVGT- 336 (398)
T ss_dssp HHHHHHHHTTTCCSSCCCHHHHHHHHHHHH-HHHHHTSHHHHHHHHHHHHHHHHHHHHHSTTEEESCCSGGGBCSSEEE-
T ss_pred hHHHhhhcccCCCCCCCCHHHHHHHHHHHH-HHHHccCHHHHHHHHHHHHHHHHHHHHHcCCceeccCChhhcCCcEEE-
Confidence 00000000 0111 1122222 33333332 12223 78889999999999999998886665422 24 3555888
Q ss_pred ecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec--CHHHHHHHHHHHHHHHHH
Q 047983 156 CGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV--EPSAFEIGLGRMKAFYYR 228 (233)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~--~~~~l~~~~~~l~~~l~~ 228 (233)
++++. ++ +..++..+ |.++||.+.||......+++|++++. +++++++++++|++++++
T Consensus 337 --------~~~~~----~~-~~~~l~~~-L~~~gI~v~~g~~~~~~~~iRis~~~~~t~e~i~~~~~~l~~~l~~ 397 (398)
T 2fyf_A 337 --------IDFVD----DV-DAGTVAKI-LRANGIVDTEPYRKLGRNQLRVAMFPAVEPDDVSALTECVDWVVER 397 (398)
T ss_dssp --------EEECT----TS-CHHHHHHH-HHHTTCBCCSCCTTTCSSEEEEECCTTSCHHHHHHHHHHHHHHHHT
T ss_pred --------EECCC----CC-CHHHHHHH-HHHCCcEEecCcccCCCCEEEEEecCCCCHHHHHHHHHHHHHHHHh
Confidence 55532 22 24444444 55669999987332235799999994 899999999999988754
No 160
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.58 E-value=2.2e-14 Score=124.19 Aligned_cols=189 Identities=9% Similarity=0.103 Sum_probs=115.1
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEE-EEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLG-WLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G-~~~~~~~~~~~~~~~~~~~ 79 (233)
++|.++|+++|++||+||+|.. +..+..+.. .+..+++.|+||.++ |+ +| |+++++ .+++.+.-.
T Consensus 185 ~~i~~l~~~~~~~li~D~a~~~----g~~~~~~~~---~~~d~~~~s~~K~~g-~~--~G~~~~~~~--~~~~~l~~~-- 250 (406)
T 3cai_A 185 RAMTKLVHDVGALVVVDHSAAA----PYRLLDIRE---TDADVVTVNAHAWGG-PP--IGAMVFRDP--SVMNSFGSV-- 250 (406)
T ss_dssp HHHHHHHHHTTCEEEEECTTTT----TTCCCCHHH---HCCSEEEEEGGGGTS-CS--CEEEEESCH--HHHHTSCCC--
T ss_pred HHHHHHHHHcCCEEEEEccccc----CCCCCCchh---cCCCEEEeehhhhcC-CC--cCeEEEEeh--HHHhhcCCc--
Confidence 3789999999999999999984 211112222 234588999999764 44 99 999987 444321100
Q ss_pred hhhhhHHhhhhhhhhccC-cchHH-HHHHHHhhhc--------------HHHHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 047983 80 HSISLNMRMDDYLLLSES-VYTTV-GAVPQILEKT--------------EEEFFSKITDILREAADICCDRLKEIPCITC 143 (233)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~l~~~--------------~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 143 (233)
..... .. ....+..+ ++... .++...++.. ..+++++.++.++++++++.+.|++++++..
T Consensus 251 ~~~~~-~~--~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 327 (406)
T 3cai_A 251 STNPY-AT--GPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRERLAVSMQSADAYLNRVFDYLMVSLRSLPLVML 327 (406)
T ss_dssp CSCTT-CC--GGGGGCCSCCCHHHHHHHHHHHHHHHTSSTTCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEEE
T ss_pred ccCCC-CC--ccccccCCCccHHHHHHHHHHHHHHHHhccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHhcCCCeEE
Confidence 00000 00 00011111 22221 2222222111 1126788999999999999999998877654
Q ss_pred ccCCC---ccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCc------ccCC---CCcEEEEeec-
Q 047983 144 PKKPE---GSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGI------TVGL---KDWLRITFAV- 210 (233)
Q Consensus 144 ~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~------~f~~---~~~~Rl~~~~- 210 (233)
..|. ++ +++ +.++ +. +.+.+.+.|.++||.+.+|+ .|+. .+++|+++..
T Consensus 328 -~~~~~~~~~-~~~---------~~~~-----~~--~~~~~~~~L~~~gi~v~~g~~~~~~~~~g~~~~~~~iRis~~~~ 389 (406)
T 3cai_A 328 -IGRPEAQIP-VVS---------FAVH-----KV--PADRVVQRLADNGILAIANTGSRVLDVLGVNDVGGAVTVGLAHY 389 (406)
T ss_dssp -CCCCSSBCS-EEE---------EEET-----TB--CHHHHHHHHHHTTEECEECCSCHHHHHHTTTTTTCCEEEECCTT
T ss_pred -cCCccccCC-EEE---------EEEC-----Cc--CHHHHHHHHHHCCcEEecCChHHHHHHcCCCCCCCeEEEEeecC
Confidence 3443 45 566 4443 11 33344455567899999987 4543 4799999996
Q ss_pred -CHHHHHHHHHHHHH
Q 047983 211 -EPSAFEIGLGRMKA 224 (233)
Q Consensus 211 -~~~~l~~~~~~l~~ 224 (233)
+++++++++++|++
T Consensus 390 ~t~e~i~~~~~~l~~ 404 (406)
T 3cai_A 390 STMAEVDQLVRALAS 404 (406)
T ss_dssp CCHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHH
Confidence 78899999888864
No 161
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.56 E-value=6.5e-14 Score=119.61 Aligned_cols=189 Identities=13% Similarity=0.052 Sum_probs=114.6
Q ss_pred cCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhhhhhhHHhhh
Q 047983 10 LGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHSISLNMRMD 89 (233)
Q Consensus 10 ~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (233)
+|+++|+|++|+.+.. +..+. .. .+++.|+||.++.+| +||+++++ ++++.+.-. ...........
T Consensus 166 ~~~~vivD~a~~~~~~----~~~~~---~~--d~~~~s~~K~~g~~G--~G~l~~~~--~~~~~l~~~-~~~~~~~~~~~ 231 (362)
T 2c0r_A 166 GSVPLIGDMSSDILSR----PFDLN---QF--GLVYAGAQKNLGPSG--VTVVIVRE--DLVAESPKH-LPTMLRYDTYV 231 (362)
T ss_dssp TTSCEEEECTTTTTSS----CCCGG---GC--SEEEEETTTTTCCSS--CEEEEEEG--GGSSSCCTT-SCGGGCHHHHH
T ss_pred CCCEEEEEChhhccCC----ccchh---HC--cEEEEeccccccCcC--cEEEEEcH--HHHhhcccc-CchHHhHHHHh
Confidence 7999999999987431 12222 22 277789999999889 99999987 455322100 00000000000
Q ss_pred hhhhhccCcchHH-HHHHHHhhhcHHH-HHHHHHHHHHHHHHHHHHHhhcCCCc-ccccCC--CccEEEEEecCCCcccc
Q 047983 90 DYLLLSESVYTTV-GAVPQILEKTEEE-FFSKITDILREAADICCDRLKEIPCI-TCPKKP--EGSMFVMYCGSEDKCLL 164 (233)
Q Consensus 90 ~~~~~~~~~~~~~-~~~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~~~-~~~~~~--~~g~~~~~~~~~~~~~~ 164 (233)
.......+++... .++...++...+. .++++++.++++++++.+.|++++++ .....+ .++.++| +
T Consensus 232 ~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~---------~ 302 (362)
T 2c0r_A 232 KNNSLYNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQSGGFYRGCVDVDSRSDMNIT---------F 302 (362)
T ss_dssp HTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSSEESSCGGGBCSSEEE---------E
T ss_pred hccCcCCCchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHcCCccccCCChHHcCCcEEE---------E
Confidence 0001111222222 3333333222222 57889999999999999999988534 321111 2345567 4
Q ss_pred cccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec--CHHHHHHHHHHHHHHHHHH
Q 047983 165 KLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV--EPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~--~~~~l~~~~~~l~~~l~~~ 229 (233)
.++... +...+.+.|.++||.+.||..| .+++|+|++. ++++++.+++.|+++++++
T Consensus 303 ~~~~~~------~~~~~~~~L~~~gi~~~~g~~~--~~~iRis~~~~~~~e~i~~l~~~l~~~~~~~ 361 (362)
T 2c0r_A 303 RLASEE------LEKEFVKASEQEGFVGLKGHRS--VGGLRASIYNAVPYESCEALVQFMEHFKRSR 361 (362)
T ss_dssp ECSCHH------HHHHHHHHHHHTTEESCBCCTT--TCSEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred EcCCcc------hHHHHHHHHHHCCCeeccCCCC--CCEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 443111 3344455577889999998776 3689999985 7899999999999988765
No 162
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.56 E-value=1.5e-14 Score=124.92 Aligned_cols=192 Identities=11% Similarity=-0.017 Sum_probs=100.7
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEE-ecCCCcccc-ccchhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLV-TSDPNGILQ-DLGVAF 78 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~-~~~~~~~~~-~~~~~~ 78 (233)
++|+++|++||++||+||+|+... ....+... ..+++.|+||.++.+| +|+++ +++. .+.+ ...+..
T Consensus 179 ~~i~~la~~~~~~li~D~a~~~~~----~~~~~~~~----~d~~~~s~~K~~g~~g--~g~~~~~~~~-~~~~~~~~~~~ 247 (400)
T 3vax_A 179 AELAQQLRATPTYLHVDAAQGYGK----VPGDLTTP----IDMISISGHKIGAPKG--VGALVTRRRE-EMDDERVPLEP 247 (400)
T ss_dssp HHHHHHHTTSSCEEEEECTTTTTT----SGGGGGSC----CSEEEEETGGGTSCSS--CEEEEECBCS-SSTTCBCCCCC
T ss_pred HHHHHHHHhcCCEEEEEhhhhcCC----CCcChhhc----CcEEEEeHHHhCCCCc--eEEEEEecch-hccccccccCc
Confidence 378999999999999999998522 11122212 3488999999877665 56766 6652 1110 001110
Q ss_pred hhhhhhHHhhhhhhhhcc-CcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCc---cEEE
Q 047983 79 FHSISLNMRMDDYLLLSE-SVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEG---SMFV 153 (233)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~---g~~~ 153 (233)
.. ........... ..+... .++...++ ...+++++.++.++++++++.+.|+ .+++.. ..+.+ +.++
T Consensus 248 ~~-----~~~~~~~~~~~~~~~~~~~~a~~~al~-~~~~~~~~~~~~~~~~~~~l~~~L~-~~~~~~-~~~~~~~~~~~~ 319 (400)
T 3vax_A 248 IM-----FGGGQERKLRPGTLPVPLIMGLAEAAK-IFEAEHAQWQVAAQDLRSRLLAGLA-STSFQV-NGDQDHVVPHIL 319 (400)
T ss_dssp SS-----CSSCTGGGTSCSCCCHHHHHHHHHHHH-HHHHSHHHHHHHHHHHHHHHHHHHT-TTTCEE-CSCTTSBCTTEE
T ss_pred ee-----cCCCceeeeecCCCCHHHHHHHHHHHH-HHHhhHHHHHHHHHHHHHHHHHhhC-CCCEEE-eCCcccCCCCEE
Confidence 00 00000001111 122222 33333322 2234678899999999999999998 767664 34443 3344
Q ss_pred EEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC-------------------CCcEEEEe-ec--C
Q 047983 154 MYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL-------------------KDWLRITF-AV--E 211 (233)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~-------------------~~~~Rl~~-~~--~ 211 (233)
+ +.++ +. +.+.+.+.|. +||.+.+|+.|+. .+++|+++ +. +
T Consensus 320 ~---------~~~~-----~~--~~~~l~~~L~-~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t 382 (400)
T 3vax_A 320 N---------LSFE-----DV--DAEAFLVTLK-DLVAVATGSASTSASFTPSHVLRAMGLPEEAASKSLRFSWTPGQAT 382 (400)
T ss_dssp E---------EECT-----TC--CHHHHHHHHH-HHHHHTTTTEEEEEEECCHHHHHTTTCCHHHHTSEEEEEEEEC---
T ss_pred E---------EEeC-----CC--CHHHHHHHHh-cCcEEEecccccCCCCCccHHHHHcCCCccccCceEEEEccCCCCC
Confidence 4 3333 11 3444555566 8999999976643 48999999 63 7
Q ss_pred HHHHHHHHHHHHHHHHH
Q 047983 212 PSAFEIGLGRMKAFYYR 228 (233)
Q Consensus 212 ~~~l~~~~~~l~~~l~~ 228 (233)
++++++++++|++++++
T Consensus 383 ~e~i~~~~~~l~~~~~~ 399 (400)
T 3vax_A 383 DLDVEELARGVAKLKPS 399 (400)
T ss_dssp -----------------
T ss_pred HHHHHHHHHHHHHHhcc
Confidence 88899999999988754
No 163
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.56 E-value=3.2e-14 Score=126.46 Aligned_cols=199 Identities=17% Similarity=0.077 Sum_probs=122.1
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCC-C---ceEEEEEecCCCccccccch
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVP-G---WRLGWLVTSDPNGILQDLGV 76 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~-G---~R~G~~~~~~~~~~~~~~~~ 76 (233)
++|+++|++||+++|+||+|....++. .+...+ +..+++.|++|.|+.| | .|+||+++++ .+++.+.-
T Consensus 223 ~~i~~l~~~~g~~li~Dea~~~~~~g~---~~~~~~---g~di~~~s~~K~~~~p~g~gG~~~G~~~~~~--~l~~~l~~ 294 (474)
T 1wyu_B 223 LEISRLCKEAGVQLYYDGANLNAIMGW---ARPGDM---GFDVVHLNLHKTFTVPHGGGGPGSGPVGVKA--HLAPYLPV 294 (474)
T ss_dssp HHHHHHHHHHTCEEEEEGGGGGGTTTT---CCHHHH---TCSEEECCTTTTTCCCCTTSCCCCCCEEECG--GGGGGCCS
T ss_pred HHHHHHHHHcCCEEEEeCchhhhhccC---CCcccC---CCcEEEEeCccccccCCCCCCCCeEEEEEcH--HHHHhCCC
Confidence 378999999999999999998766431 122222 3458888999998877 5 5999999988 45432210
Q ss_pred hhhhhhhhH------Hhh---hhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCC
Q 047983 77 AFFHSISLN------MRM---DDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKP 147 (233)
Q Consensus 77 ~~~~~~~~~------~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 147 (233)
..+..... .+- ......+.+...+.++++. +.....+.+++..+.+.++++++.+.|+++ ++.. ..+
T Consensus 295 -~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~-l~~~g~~~l~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~ 370 (474)
T 1wyu_B 295 -PLVERGEEGFYLDFDRPKSIGRVRSFYGNFLALVRAWAY-IRTLGLEGLKKAAALAVLNARYLKELLKEK-GYRV-PYD 370 (474)
T ss_dssp -CEEEECSSCEEEECCCTTCCCCSSSTTSCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCBC-SSC
T ss_pred -CeeeccCCeeEecccCcccCcccccCcCcHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcEe-cCC
Confidence 00000000 000 0000111111111133333 333345678888999999999999999887 5543 122
Q ss_pred CccEE--EEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC--CCcEEEEeec--CHHHHHHHHHH
Q 047983 148 EGSMF--VMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL--KDWLRITFAV--EPSAFEIGLGR 221 (233)
Q Consensus 148 ~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--~~~~Rl~~~~--~~~~l~~~~~~ 221 (233)
++.+ +| +.++. +. +..++..+++ ++||.+ |+..|+. .+++|++++. +.+++++++++
T Consensus 371 -~~~~~~~~---------~~~~~----~~-~~~~l~~~L~-~~Gi~~-~~~~~~~~~~~~lRis~~~~~t~e~id~~~~~ 433 (474)
T 1wyu_B 371 -GPSMHEFV---------AQPPE----GF-RALDLAKGLL-ELGFHP-PTVYFPLIVKEALMVEPTETEAKETLEAFAEA 433 (474)
T ss_dssp -SSCCSCEE---------EBCST----TC-CHHHHHHHHH-HTTCCC-CEESCSTTSTTCEEECCCTTSCHHHHHHHHHH
T ss_pred -CCcceEEE---------EEcCC----CC-CHHHHHHHHH-HCCccc-cccccccccCCEEEEEeecCCCHHHHHHHHHH
Confidence 2233 55 33311 12 3455555555 569984 7777752 6899999997 78999999999
Q ss_pred HHHHHHH
Q 047983 222 MKAFYYR 228 (233)
Q Consensus 222 l~~~l~~ 228 (233)
|++++++
T Consensus 434 L~~~~~~ 440 (474)
T 1wyu_B 434 MGALLKK 440 (474)
T ss_dssp HHHHHTS
T ss_pred HHHHHHh
Confidence 9988753
No 164
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.55 E-value=2.5e-14 Score=124.14 Aligned_cols=191 Identities=14% Similarity=0.099 Sum_probs=116.9
Q ss_pred ChHHHHHHHcCcEEEEccccCccc-cCCCccccccccCCccCEEEEccC--ccccCCCCceEEEEEecCCCccccccchh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLV-FGNTHFVPMGVFGSIVPVLTLGSI--SKRWIVPGWRLGWLVTSDPNGILQDLGVA 77 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~-~~~~~~~~~~~~~~~~~~i~~~s~--sK~~~~~G~R~G~~~~~~~~~~~~~~~~~ 77 (233)
++|+++|+++|+++|+||+|+.+. +++.. +..+ ..+++.|+ ||.++.+| |.||++++++ ++++. +
T Consensus 168 ~~i~~l~~~~~~~li~Dea~~~g~~~~~~~---~~~~----~di~~~S~~~sK~~~~~G-~~g~~~~~~~-~~~~~---l 235 (399)
T 2oga_A 168 DALRELADRHGLHIVEDAAQAHGARYRGRR---IGAG----SSVAAFSFYPGKNLGCFG-DGGAVVTGDP-ELAER---L 235 (399)
T ss_dssp HHHHHHHHHHTCEECEECTTCTTCEETTEE---TTCT----TCEEEEECCTTSSSCCSS-CCEEEEESCH-HHHHH---H
T ss_pred HHHHHHHHHcCCEEEEECcccccCccCCee---cccc----cCEEEEeCCCCccCCcCC-ceEEEEeCCH-HHHHH---H
Confidence 378999999999999999999763 33321 1111 13788888 89998889 9999998742 33321 1
Q ss_pred hhhhhhhHHhhhhhh----------hhccCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccC
Q 047983 78 FFHSISLNMRMDDYL----------LLSESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKK 146 (233)
Q Consensus 78 ~~~~~~~~~~~~~~~----------~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 146 (233)
....... ..+...+... .+....+ ++++...+..+++++++.+.|++++++..+..
T Consensus 236 --------~~~~~~g~~~~~~~~~~g~~~~~~~~~~a~~~~~l-----~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~ 302 (399)
T 2oga_A 236 --------RMLRNYGSRQKYSHETKGTNSRLDEMQAAVLRIRL-----AHLDSWNGRRSALAAEYLSGLAGLPGIGLPVT 302 (399)
T ss_dssp --------HHHHBTTCSSTTCCCSCCCBCCCCHHHHHHHHHHH-----HTHHHHHHHHHHHHHHHHHHTTTCTTCBCCCC
T ss_pred --------HHHHhcCccccccccccccCCCcCHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhccCCCccccCC
Confidence 1111110 0111122222 2111111 22334455666778888888988766654344
Q ss_pred CCccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccC-----------C------------CCc
Q 047983 147 PEGSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVG-----------L------------KDW 203 (233)
Q Consensus 147 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~-----------~------------~~~ 203 (233)
|+++.++| +.++... .+.+.+.+.|.++||.+.++.... . .++
T Consensus 303 ~~~~~~~~---------~~~~~~~-----~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 368 (399)
T 2oga_A 303 APDTDPVW---------HLFTVRT-----ERRDELRSHLDARGIDTLTHYPVPVHLSPAYAGEAPPEGSLPRAESFARQV 368 (399)
T ss_dssp CTTEECCC---------SSEEEEC-----SSHHHHHHHHHHTTBCCBCSCSSCGGGSHHHHTTSCCTTSCHHHHHHHHHE
T ss_pred CCCCccee---------EEEEEEC-----CCHHHHHHHHHHCCCceecCCCCccccchhhcccCCCCCCChhHHHHHhCE
Confidence 66677776 4343321 134445555667899998853210 0 257
Q ss_pred EEEEeec--CHHHHHHHHHHHHHHHHHHh
Q 047983 204 LRITFAV--EPSAFEIGLGRMKAFYYRHA 230 (233)
Q Consensus 204 ~Rl~~~~--~~~~l~~~~~~l~~~l~~~~ 230 (233)
+|+++.. ++++++.+++.|++++++..
T Consensus 369 lRi~~~~~~t~edi~~~~~~l~~~~~~l~ 397 (399)
T 2oga_A 369 LSLPIGPHLERPQALRVIDAVREWAERVD 397 (399)
T ss_dssp EEECCSTTCCHHHHHHHHHHHHHHHHSCC
T ss_pred EEccCCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 9999874 89999999999999887543
No 165
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.55 E-value=1.5e-13 Score=118.66 Aligned_cols=181 Identities=15% Similarity=0.152 Sum_probs=112.1
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceE-EEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRL-GWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~-G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|.++|++||+++|+||+|..+.+.. ++ ..++.+++.|+||.++.+|.|+ ||++++++ +++
T Consensus 157 ~~i~~l~~~~~~~li~De~~~~~~~~~----~~----~~~~di~~~s~sK~~~~~~~~~~G~~~~~~~-~l~-------- 219 (386)
T 1cs1_A 157 AKICHLAREVGAVSVVDNTFLSPALQN----PL----ALGADLVLHSCTKYLNGHSDVVAGVVIAKDP-DVV-------- 219 (386)
T ss_dssp HHHHHHHHHTTCEEEEECTTTCTTTCC----GG----GGTCSEEEEETTTTTTCSSCCCCEEEEESSH-HHH--------
T ss_pred HHHHHHHHHcCCEEEEECCCcccccCC----cc----ccCceEEEEcCcccccCCCCceeEEEEeCcH-HHH--------
Confidence 378999999999999999999876532 12 1345689999999999999997 99999762 233
Q ss_pred hhhhhHHhhhhhhh-hccCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccc------------
Q 047983 80 HSISLNMRMDDYLL-LSESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPK------------ 145 (233)
Q Consensus 80 ~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~------------ 145 (233)
..+..... .+...++.. .+....+ +++....+.+.++++.+.+.|++++.+....
T Consensus 220 ------~~l~~~~~~~~~~~~~~~~~~~~~~l-----~~~~~~~~~~~~~~~~l~~~l~~~~~l~~~~~~~l~~~~~~~~ 288 (386)
T 1cs1_A 220 ------TELAWWANNIGVTGGAFDSYLLLRGL-----RTLVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEI 288 (386)
T ss_dssp ------HHHHHHHHHHTCBCCHHHHHHHHHHH-----TTHHHHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHH
T ss_pred ------HHHHHHHHhcCCCCCHHHHHHHHhcc-----cHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCccHHH
Confidence 22222211 222223322 1111111 2345556677888888888887754322110
Q ss_pred -----CCCccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccC---------------------
Q 047983 146 -----KPEGSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVG--------------------- 199 (233)
Q Consensus 146 -----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~--------------------- 199 (233)
...++++.+ .++ . ..+.+.+.|.++||.+.+++ |+
T Consensus 289 ~~~~~~~~~~~~~~----------~~~--~------~~~~~~~~l~~~gi~~~~~~-~g~~~sl~~~~~~~~~~~~~~~~ 349 (386)
T 1cs1_A 289 AARQQKGFGAMLSF----------ELD--G------DEQTLRRFLGGLSLFTLAES-LGGVESLISHAATMTHAGMAPEA 349 (386)
T ss_dssp HHHHCSSCCSEEEE----------EES--S------CHHHHHHHHHTCSSSEEBSC-CCSSSCEEEEGGGTTTTTSCHHH
T ss_pred HHHhcCCCceEEEE----------EEC--C------CHHHHHHHHHhCCcceEccc-CCCcceeeecccccccccCCHHH
Confidence 112455444 232 1 24556677888999987421 11
Q ss_pred ------CCCcEEEEeecCHHHHHHHHHHHHHHHHHHh
Q 047983 200 ------LKDWLRITFAVEPSAFEIGLGRMKAFYYRHA 230 (233)
Q Consensus 200 ------~~~~~Rl~~~~~~~~l~~~~~~l~~~l~~~~ 230 (233)
.++++|++++. ++.++.++++.+++++..
T Consensus 350 ~~~~g~~~~~iRis~~~--~~~~~~i~~l~~al~~~~ 384 (386)
T 1cs1_A 350 RAAAGISETLLRISTGI--EDGEDLIADLENGFRAAN 384 (386)
T ss_dssp HHHHTCCTTEEEEECCS--SCHHHHHHHHHHHHHHHT
T ss_pred HHhcCCCCCeEEEEEcc--CCHHHHHHHHHHHHHHhh
Confidence 14799999997 345677777777776654
No 166
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.54 E-value=4e-14 Score=124.69 Aligned_cols=196 Identities=18% Similarity=0.160 Sum_probs=112.4
Q ss_pred ChHHHHHHHcCcEEEEccccCc----------cccCCCcccccc-ccCCccCEEEEccCccccCCCCceEEEEEecCCCc
Q 047983 1 FCIEETTKKLGIMVIADEVYGH----------LVFGNTHFVPMG-VFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNG 69 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~----------~~~~~~~~~~~~-~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~ 69 (233)
++|+++|++||++||+||+|+. +.+.+....++. .+....+++++ |++|. +.+| |.||++++++ +
T Consensus 198 ~~i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~-S~kk~-~~~~-~gG~~~~~~~-~ 273 (456)
T 2ez2_A 198 RAVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMFSYADGCTM-SGKKD-CLVN-IGGFLCMNDD-E 273 (456)
T ss_dssp HHHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTTCSEEEE-ETTTT-TCCS-SCEEEEESCH-H
T ss_pred HHHHHHHHHcCCeEEEEccccccccccccccccccCCcchhhhhhhhcccCCEEEE-eCccc-CCCC-ceeEEEECCH-H
Confidence 3789999999999999999986 445543211111 11222345555 77886 5577 8999998532 3
Q ss_pred cccccchhhhhhhhhHHhhhhhh-hh--ccCcchHH-HH-HHHHhhhcHHHHH-HHHHHHHHHHHHHHHHHhhcCCCccc
Q 047983 70 ILQDLGVAFFHSISLNMRMDDYL-LL--SESVYTTV-GA-VPQILEKTEEEFF-SKITDILREAADICCDRLKEIPCITC 143 (233)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~-~~-~~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~ 143 (233)
+++. + ..+.... .. ..+.+... .+ ...++ +.+ +...++..++.+.+.+.|++. ++..
T Consensus 274 ~~~~---~--------~~~~~~~~~~~~~~~~~~~~~~a~a~~~~-----~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~ 336 (456)
T 2ez2_A 274 MFSS---A--------KELVVVYEGMPSYGGLAGRDMEAMAIGLR-----EAMQYEYIEHRVKQVRYLGDKLKAA-GVPI 336 (456)
T ss_dssp HHHH---H--------HHHHHHHTCCTTTTTCCHHHHHHHHHHHH-----HHTCHHHHHHHHHHHHHHHHHHHHT-TCCB
T ss_pred HHHH---H--------HHHHhhccCcccccCcchhHHHHHHHHHH-----HHhHHHHHHHHHHHHHHHHHHHhcC-CCcc
Confidence 4321 1 1111110 00 01111111 22 11111 111 233344455566777777765 5543
Q ss_pred ccCCCccEEEEEecCCCccccccccccc-CCCCChHHH-----HHHHHhccCEEEEC-CcccC------------CCCcE
Q 047983 144 PKKPEGSMFVMYCGSEDKCLLKLNYSLL-EGINSDTEF-----ALKLAKEESIIVLP-GITVG------------LKDWL 204 (233)
Q Consensus 144 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-----~~~ll~~~gi~v~p-g~~f~------------~~~~~ 204 (233)
..|.+++++| +.+. .+ ++. +..++ ..++++++||.++| |..|. ..+++
T Consensus 337 -~~p~~~~~~~---------~~~~--~~~~~~-~~~~~~~~~l~~~L~~~~gv~~~~~g~~~~~~~~~~g~~~~~~~~~i 403 (456)
T 2ez2_A 337 -VEPVGGHAVF---------LDAR--RFCEHL-TQDEFPAQSLAASIYVETGVRSMERGIISAGRNNVTGEHHRPKLETV 403 (456)
T ss_dssp -CSSCCSSEEE---------EEHH--HHTTTS-CGGGCHHHHHHHHHHHHHSEECEEESHHHHCBCTTTCSBCCCSCCEE
T ss_pred -ccCCCceEEE---------EEhH--HhcCCC-ChhhccHHHHHHHHHHhcCeeeecccccccccCccccccccCCCCeE
Confidence 5688899999 4432 10 011 12233 45555788999877 55441 13789
Q ss_pred EEEee---cCHHHHHHHHHHHHHHHHHHh
Q 047983 205 RITFA---VEPSAFEIGLGRMKAFYYRHA 230 (233)
Q Consensus 205 Rl~~~---~~~~~l~~~~~~l~~~l~~~~ 230 (233)
|+++. .+++++++++++|.+++++..
T Consensus 404 Ris~~~~~~t~e~i~~~~~~l~~~l~~~~ 432 (456)
T 2ez2_A 404 RLTIPRRVYTYAHMDVVADGIIKLYQHKE 432 (456)
T ss_dssp EEECCTTTCCHHHHHHHHHHHHHHHHTGG
T ss_pred EEEeCCCCCCHHHHHHHHHHHHHHHhhhh
Confidence 99999 589999999999999987643
No 167
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.54 E-value=1.2e-13 Score=119.94 Aligned_cols=195 Identities=10% Similarity=0.004 Sum_probs=116.9
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceE-EEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRL-GWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~-G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|.++|++||+++|+||+|+. +..+..+..+ +..+++.|++|.+ .+|.++ ||+++++ .+++.+.-. .
T Consensus 185 ~~i~~l~~~~~~~li~D~a~~~----g~~~~~~~~~---~~d~~~~s~~K~l-~~g~~~~g~l~~~~--~~~~~l~~~-~ 253 (416)
T 1qz9_A 185 QALTALSHECGALAIWDLAHSA----GAVPVDLHQA---GADYAIGCTYKYL-NGGPGSQAFVWVSP--QLCDLVPQP-L 253 (416)
T ss_dssp HHHHHHHHHHTCEEEEECTTTT----TTSCCCHHHH---TCSEEEECSSSTT-CCCTTCCCEEEECT--TTTTTSCCS-C
T ss_pred HHHHHHHHHcCCEEEEEccccc----cCcCCChhhc---CCCEEEecCcccC-CCCCCCeEEEEECH--HHHhccCCC-c
Confidence 3789999999999999999984 2221222222 2348889999984 457777 9999987 444321100 0
Q ss_pred hhhhhHH-------hhh---hhhhhcc-CcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcC-C--Ccccc
Q 047983 80 HSISLNM-------RMD---DYLLLSE-SVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEI-P--CITCP 144 (233)
Q Consensus 80 ~~~~~~~-------~~~---~~~~~~~-~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~--~~~~~ 144 (233)
+...... .+. ....... +++... .++...++....+++++.++.++++++++.+.|+++ + ++..
T Consensus 254 ~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~- 332 (416)
T 1qz9_A 254 SGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQTDMASLRRKSLALTDLFIELVEQRCAAHELTL- 332 (416)
T ss_dssp CCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHTTSCCEE-
T ss_pred cccCccccccCCCCccCCCcchHHhcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhccCCCeEE-
Confidence 0000000 000 0001111 122222 333333322122356788899999999999999874 5 5553
Q ss_pred cCCC----ccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec---CHHHHHH
Q 047983 145 KKPE----GSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV---EPSAFEI 217 (233)
Q Consensus 145 ~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~---~~~~l~~ 217 (233)
..|. .+.++| ++++ +..+ +.+.|.++||.+.+ ...+++|++++. +++++++
T Consensus 333 ~~~~~~~~~~~~~~---------~~~~--------~~~~-l~~~l~~~gi~~~~----~~~~~lRis~~~~~~t~~~i~~ 390 (416)
T 1qz9_A 333 VTPREHAKRGSHVS---------FEHP--------EGYA-VIQALIDRGVIGDY----REPRIMRFGFTPLYTTFTEVWD 390 (416)
T ss_dssp CSCSSGGGBCSEEE---------EECT--------THHH-HHHHHHTTTEECEE----ETTTEEEEECCTTTCCHHHHHH
T ss_pred eCCCCHHHcCCEEE---------EecC--------CHHH-HHHHHHhCCcEecc----CCCCeEEEeCcccCCCHHHHHH
Confidence 3443 245678 4443 1334 44455577998743 246899999973 8999999
Q ss_pred HHHHHHHHHHHH
Q 047983 218 GLGRMKAFYYRH 229 (233)
Q Consensus 218 ~~~~l~~~l~~~ 229 (233)
++++|.+++++.
T Consensus 391 ~~~~l~~~~~~~ 402 (416)
T 1qz9_A 391 AVQILGEILDRK 402 (416)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHhcc
Confidence 999999998764
No 168
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.53 E-value=3.5e-13 Score=120.81 Aligned_cols=204 Identities=11% Similarity=0.016 Sum_probs=123.1
Q ss_pred ChHHHHHHHcCcEEEEccccCccccC-----CCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccc
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFG-----NTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLG 75 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~-----~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~ 75 (233)
++|.++|++||++||+||+|+++.+. +....++. ....+..+++.|++|. +.+|.++||+++++. .+....
T Consensus 259 ~~i~~la~~~~i~livDea~~~~~~~~~~~~g~~~~~~~-~~~~g~d~~~~s~~K~-l~~~~~~g~~~~~~~--~~~~~~ 334 (514)
T 3mad_A 259 PEIAALAAEHGIGCHVDACLGGFILPWAERLGYPVPPFD-FRLEGVTSVSADTHKY-GYGAKGTSVILYRRP--DLLHYQ 334 (514)
T ss_dssp HHHHHHHHHHTCEEEEECTTTTTTHHHHHHTTCCCCCCS-TTSTTCCEEEECTTTT-TCCCSSCEEEEESSH--HHHTTT
T ss_pred HHHHHHHHHhCCeEEEecccccccchhHHhcCCCCCccc-ccCCCCcEEEECchhc-cCCCCCeEEEEEeCH--HHhccc
Confidence 47899999999999999999988652 11111222 2222345888999998 567889999999872 221100
Q ss_pred hhhhhhhhhHHhhhhhhhhccCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEE
Q 047983 76 VAFFHSISLNMRMDDYLLLSESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVM 154 (233)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~ 154 (233)
... ............ ....+.+... .++...+.......+++..+.+.++++++.+.|++++++.. ..+..+ ++|
T Consensus 335 ~~~-~~~~~~~~~~~~-~~~gs~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~-~~~~~~-~~~ 410 (514)
T 3mad_A 335 YFI-AADWPGGLYFSP-TFAGSRPGALSATAWAAMLSLGEEGYLDATRRILQAADRLKAGVRAIPSLKI-LGDPLW-VIA 410 (514)
T ss_dssp CEE-ESSCTTCSEEES-SSCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCEE-SSCCSS-EEE
T ss_pred ccc-ccccCCCcccCC-ccCCCCchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEE-eCCCeE-EEE
Confidence 000 000000000000 0111112221 22222222224456788899999999999999999877765 344444 555
Q ss_pred EecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec---CHHHHHHHHHHHHHHHHHHhh
Q 047983 155 YCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV---EPSAFEIGLGRMKAFYYRHAK 231 (233)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~---~~~~l~~~~~~l~~~l~~~~~ 231 (233)
+.. . +. +...+.+.|.++||.+ +|..| .+++|+++.. +++++++++++|.+++++..+
T Consensus 411 ---------~~~--~---~~--~~~~l~~~L~~~Gi~v-~g~~~--~~~~Ri~~~~~~~~~e~i~~~l~~L~~~l~~~~~ 471 (514)
T 3mad_A 411 ---------VAS--D---EL--NIYQVMEEMAGRGWRL-NGLHR--PPAFHVALTLRHTEPGVVDRFLADLQDAVAQVRA 471 (514)
T ss_dssp ---------EEC--S---SS--CHHHHHHHHHTTTCBC-EEETT--TTEEEEECCGGGGSTTHHHHHHHHHHHHHHHHHH
T ss_pred ---------EeC--C---CC--CHHHHHHHHHhcCCEe-ccCCC--CCeEEEEEecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 222 1 11 3444555566779988 54444 4789999983 568999999999999987753
No 169
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.52 E-value=3.4e-13 Score=117.86 Aligned_cols=194 Identities=12% Similarity=0.164 Sum_probs=114.9
Q ss_pred ChHHHHHHHcCcEEEEccccC-ccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYG-HLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~-~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|+++|+++|++||+||+|+ ++.+++.. +..+ . + +++.|+||..+++|.|+||++++++ ++++. +
T Consensus 155 ~~i~~la~~~~~~li~Dea~~~g~~~~~~~---~~~~-~-d--i~~~S~sk~K~l~~~~~G~~v~~~~-~l~~~--l--- 221 (424)
T 2po3_A 155 DQLRKVADEHGLRLYFDAAHALGCAVDGRP---AGSL-G-D--AEVFSFHATKAVNAFEGGAVVTDDA-DLAAR--I--- 221 (424)
T ss_dssp HHHHHHHHHTTCEEEEECTTCTTCEETTEE---TTSS-S-S--EEEEECCTTSSSCCSSCEEEEESCH-HHHHH--H---
T ss_pred HHHHHHHHHcCCEEEEECccccCCeECCee---cccc-c-C--EEEEeCCCCCCccCCCCeEEEeCCH-HHHHH--H---
Confidence 378999999999999999999 57665432 2211 1 2 8899999777778899999999842 34321 1
Q ss_pred hhhhhHHhhhhhhh--------hccC-cchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCcc
Q 047983 80 HSISLNMRMDDYLL--------LSES-VYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGS 150 (233)
Q Consensus 80 ~~~~~~~~~~~~~~--------~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g 150 (233)
........ .+.+ ..++..+...+ ...+.+++..++.+++++++.+.|++++++..+..|+++
T Consensus 222 ------~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l---~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~ 292 (424)
T 2po3_A 222 ------RALHNFGFDLPGGSPAGGTNAKMSEAAAAMGL---TSLDAFPEVIDRNRRNHAAYREHLADLPGVLVADHDRHG 292 (424)
T ss_dssp ------HHHHBTTTTCTTCCTTCCCBCCCCHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHTCSCTTEEECCGGGGS
T ss_pred ------HHHHhcCccccccccccCcCCCcCHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHhccCCCccccCCCCCC
Confidence 11111100 0000 11222222222 122345667777888888888999887666543224443
Q ss_pred ----EEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC----------------CCc-------
Q 047983 151 ----MFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL----------------KDW------- 203 (233)
Q Consensus 151 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~----------------~~~------- 203 (233)
+.++ +.++.... +. +.+.+.+.|.++||.+.+ .|++ .+.
T Consensus 293 ~~~~~~~~---------i~~~~~~~-~~--~~~~l~~~L~~~gI~v~~--~~~~~~~~~~~~~~~g~~~~~~~~r~~~~~ 358 (424)
T 2po3_A 293 LNNHQYVI---------VEIDEATT-GI--HRDLVMEVLKAEGVHTRA--YFSPGCHELEPYRGQPHAPLPHTERLAARV 358 (424)
T ss_dssp CCCCCCEE---------EEECHHHH-SS--CHHHHHHHHHHTTEECBC--TTCSCGGGSTTTTTSCCCCCHHHHHHHTTE
T ss_pred ccccEEEE---------EEECCccc-hh--hHHHHHHHHHHCCCceec--ccCCccccchhhhhcCCCCChhHHHHhcCE
Confidence 2333 22321000 11 344555677788999987 2221 112
Q ss_pred EEEEee--cCHHHHHHHHHHHHHHHHHHh
Q 047983 204 LRITFA--VEPSAFEIGLGRMKAFYYRHA 230 (233)
Q Consensus 204 ~Rl~~~--~~~~~l~~~~~~l~~~l~~~~ 230 (233)
+|+++. .++++++++++.|.+++++..
T Consensus 359 l~l~~~~~~t~e~i~~~~~~L~~~~~~~~ 387 (424)
T 2po3_A 359 LSLPTGTAIGDDDIRRVADLLRLCATRGR 387 (424)
T ss_dssp EEECCSTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEeeCCCCCCHHHHHHHHHHHHHHHhhhH
Confidence 666533 389999999999999887653
No 170
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.50 E-value=8.5e-14 Score=120.75 Aligned_cols=58 Identities=14% Similarity=0.208 Sum_probs=48.2
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceE-EEEEecC
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRL-GWLVTSD 66 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~-G~~~~~~ 66 (233)
++|+++|++||+++|+||+|..+.+.. ++ . .+..+++.|+||.++++|+|+ ||+++++
T Consensus 169 ~~i~~l~~~~~~~li~De~~~~~~~~~----~~-~---~~~di~~~s~sK~~~~~g~~~~G~~~~~~ 227 (398)
T 2rfv_A 169 ETVAGIAHQQGALLVVDNTFMSPYCQQ----PL-Q---LGADIVVHSVTKYINGHGDVIGGIIVGKQ 227 (398)
T ss_dssp HHHHHHHHHTTCEEEEECTTTCTTTCC----GG-G---GTCSEEEEETTTTTTCSSCCCCEEEEECH
T ss_pred HHHHHHHHHcCCEEEEECCCcccccCC----ch-h---hCCcEEEEeCcccccCCCCceEEEEEECH
Confidence 378999999999999999999876532 12 1 245699999999999999999 9999987
No 171
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.50 E-value=4.1e-13 Score=119.73 Aligned_cols=202 Identities=10% Similarity=-0.031 Sum_probs=124.5
Q ss_pred ChHHHHHHHcCcEEEEccccCccccC-----CCccc-cccccCCccCEEEEccCccccCCCCceEEEEEecCCCcccccc
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFG-----NTHFV-PMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDL 74 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~-----~~~~~-~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~ 74 (233)
++|.++|++||+++|+|++|+.+... +.... ++. .......+++.|++|. +.+|.++||+++++ ..+...
T Consensus 226 ~~i~~la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~~-~~~~g~d~~~~s~~K~-l~~~~~~g~~~~~~--~~~~~~ 301 (497)
T 3mc6_A 226 EGLGKIAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLD-FRVPGVTSISCDTHKY-GFAPKGSSVIMYRN--SDLRMH 301 (497)
T ss_dssp TTTTTHHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCCS-TTSTTCCEEEEETTTT-TCCCSSCEEEECSS--HHHHTT
T ss_pred HHHHHHHHHhCCEEEEECcchhhhhhhhhhhcccCCcccc-ccCCCCcEEEECchhh-cCCCCCceeEEecC--HHHHhh
Confidence 47899999999999999999966432 11111 121 2222334778899997 67788999999987 222210
Q ss_pred chhhhhhhhhHHhhh-hhhh--hccCcchH-HHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhc-CCCcccccCCCc
Q 047983 75 GVAFFHSISLNMRMD-DYLL--LSESVYTT-VGAVPQILEKTEEEFFSKITDILREAADICCDRLKE-IPCITCPKKPEG 149 (233)
Q Consensus 75 ~~~~~~~~~~~~~~~-~~~~--~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~ 149 (233)
... .. . .... .+.. +..+.+.. ..++...+..-....+.+..+.+.++++++.+.|++ ++++..+.+|.+
T Consensus 302 ~~~-~~-~---~~~~~~~~~~~~~g~~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~g~~~~~~~~~ 376 (497)
T 3mc6_A 302 QYY-VN-P---AWTGGLYGSPTLAGSRPGAIVVGCWATMVNMGENGYIESCQEIVGAAMKFKKYIQENIPDLDIMGNPRY 376 (497)
T ss_dssp TSC-CB-T---TCTTSCBCCSSSCSSCBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCEECSCCCS
T ss_pred hhc-cc-c---cccCCCcCCcCcccCCcchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCCe
Confidence 000 00 0 0000 0000 00111111 122222222223455678888899999999999998 788776456777
Q ss_pred cEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec-CHHHHHHHHHHHHHHHHH
Q 047983 150 SMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV-EPSAFEIGLGRMKAFYYR 228 (233)
Q Consensus 150 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~-~~~~l~~~~~~l~~~l~~ 228 (233)
+++.| .. . +. +...+.+.|.++||.+.++.. .+.+|+++.. +.++++++++.|.+++++
T Consensus 377 ~~v~~-----------~~-~---~~--~~~~l~~~L~~~Gi~v~~~~~---~~~~ri~~~~~t~e~i~~~~~~L~~~l~~ 436 (497)
T 3mc6_A 377 SVISF-----------SS-K---TL--NIHELSDRLSKKGWHFNALQK---PVALHMAFTRLSAHVVDEICDILRTTVQE 436 (497)
T ss_dssp SEEEE-----------EC-T---TT--THHHHHHHHHTTTCBCEECCS---SCCEEEECCTTTTCTHHHHHHHHHHHHHH
T ss_pred eEEEE-----------eC-C---CC--CHHHHHHHHHhCCEEEecCCC---CCeEEEEEeCCCHHHHHHHHHHHHHHHHH
Confidence 77666 21 1 11 445556666678999876542 3478998886 788999999999999987
Q ss_pred Hhh
Q 047983 229 HAK 231 (233)
Q Consensus 229 ~~~ 231 (233)
..+
T Consensus 437 ~~~ 439 (497)
T 3mc6_A 437 LKS 439 (497)
T ss_dssp HTC
T ss_pred HHh
Confidence 653
No 172
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.50 E-value=1.3e-13 Score=118.80 Aligned_cols=193 Identities=9% Similarity=0.056 Sum_probs=119.2
Q ss_pred ChHHHHHHHcCcEEEEccccCc-cccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCcc--ccccchh
Q 047983 1 FCIEETTKKLGIMVIADEVYGH-LVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGI--LQDLGVA 77 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~-~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~--~~~~~~~ 77 (233)
++|.++|++||++||+||+|+. ..+.+. ++..++ .+.+.||||..+++|.|.||+++++. .+ ++. .
T Consensus 143 ~~i~~la~~~~~~li~D~a~~~g~~~~~~---~~~~~~----~i~~~S~s~~K~l~g~~~G~~~~~~~-~~~~~~~---~ 211 (388)
T 1b9h_A 143 DALAKISADTGVPLLQDAAHAHGARWQGK---RVGELD----SIATFSFQNGKLMTAGEGGAVVFPDG-ETEKYET---A 211 (388)
T ss_dssp HHHHHHHHHHTCCBCEECTTCTTCEETTE---EGGGSS----SCEEEECCTTSSSCSSSCEEEEECTT-CHHHHHH---H
T ss_pred HHHHHHHHHcCCEEEEecchhcCCccCCe---eccccc----ceEEEEccCCCcccCCCeEEEEECCH-HHHHHHH---H
Confidence 3789999999999999999996 333332 122222 47899999877787889999999873 13 221 1
Q ss_pred hhhhhhhHHhhhhhh-----------hhccC-cchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccc
Q 047983 78 FFHSISLNMRMDDYL-----------LLSES-VYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPK 145 (233)
Q Consensus 78 ~~~~~~~~~~~~~~~-----------~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 145 (233)
....... ..+.+ ..++. ..+.+. ...+++++.++.++++++++.+.|++++++....
T Consensus 212 --------~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~a~~~--~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 280 (388)
T 1b9h_A 212 --------FLRHSCGRPRDDRRYFHKIAGSNMRLNEF-SASVLR--AQLARLDEQIAVRDERWTLLSRLLGAIDGVVPQG 280 (388)
T ss_dssp --------HHHTBTTCCTTCSSCCCCSCCCBCBCBHH-HHHHHH--HHHTTHHHHHHHHHHHHHHHHHHHHTSTTCEECC
T ss_pred --------HHHHhCCCCccCccceeecccccCCcCHH-HHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhccCCCccccC
Confidence 1111100 00111 11221 111121 1234566788888899999999998886665322
Q ss_pred C-----CCccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccC---------------------
Q 047983 146 K-----PEGSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVG--------------------- 199 (233)
Q Consensus 146 ~-----~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~--------------------- 199 (233)
. +.+++++| ++++... + .+.+.+.+.|.++||.+.++..-.
T Consensus 281 ~~~~~~~~~~~~~~---------~~~~~~~--~--~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (388)
T 1b9h_A 281 GDVRADRNSHYMAM---------FRIPGLT--E--ERRNALVDRLVEAGLPAFAAFRAIYRTDAFWELGAPDESVDAIAR 347 (388)
T ss_dssp CCTTCCBCCCSEEE---------EECTTCC--H--HHHHHHHHHHHHTTCCEEECCCCGGGSHHHHHSSCCSSCHHHHHH
T ss_pred CCcCCCccceEEEE---------EEeCCcC--c--ccHHHHHHHHHHCCCCcccccCccccChHhHhcCCCccccccccc
Confidence 1 35688999 5554210 0 034445555667899998764310
Q ss_pred ---C-----CCcEEEEeec---CHHHHHHHHHHHHHHHHH
Q 047983 200 ---L-----KDWLRITFAV---EPSAFEIGLGRMKAFYYR 228 (233)
Q Consensus 200 ---~-----~~~~Rl~~~~---~~~~l~~~~~~l~~~l~~ 228 (233)
. .+.+|+++.. ++++++.+++.|++++++
T Consensus 348 ~~~~~~~~~~~~l~l~~~~~~~t~edi~~~~~~l~~~~~~ 387 (388)
T 1b9h_A 348 RCPNTDAISSDCVWLHHRVLLAGEPELHATAEIIADAVAR 387 (388)
T ss_dssp TCHHHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHhCeEEecCCCCCCCHHHHHHHHHHHHHHHhh
Confidence 0 1358999874 688999999999888754
No 173
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.50 E-value=1.8e-13 Score=121.48 Aligned_cols=58 Identities=19% Similarity=0.122 Sum_probs=45.5
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCC-CCceEEEEEecC
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIV-PGWRLGWLVTSD 66 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~-~G~R~G~~~~~~ 66 (233)
++|+++|++||+++|+||+|.... ...++. .++.+++.|+||.++. +|+|+||+++++
T Consensus 237 ~~i~~la~~~gi~livDea~~~g~----~~~~~~----~~~div~~S~sK~~~g~~Gl~~G~l~~~~ 295 (464)
T 1ibj_A 237 RKISEMAHAQGALVLVDNSIMSPV----LSRPLE----LGADIVMHSATKFIAGHSDVMAGVLAVKG 295 (464)
T ss_dssp HHHHHHHHTTTCEEEEECTTTCTT----TCCGGG----TTCSEEEEETTTTTTCSSCCCCEEEEECS
T ss_pred HHHHHHHHHcCCEEEEECCCcccc----cCChhh----cCCEEEEECCcccccCCCCCcEEEEEECh
Confidence 378999999999999999998622 111221 3567999999998865 499999999985
No 174
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.49 E-value=2.2e-13 Score=117.41 Aligned_cols=204 Identities=13% Similarity=0.090 Sum_probs=114.4
Q ss_pred ChHHHHHHHcCcEEEEccccCc-cccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGH-LVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~-~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|.++|+++|+++|+||+|+. ..+.+. ++ .. +.+++.|+||..+++|.|.||++++++ ++++.+.-...
T Consensus 144 ~~i~~l~~~~~~~li~D~a~~~g~~~~~~---~~---~~--~d~~~~S~~k~K~l~~~~~g~~~~~~~-~~~~~l~~~~~ 214 (393)
T 1mdo_A 144 DAIYALGERYGIPVIEDAAHATGTSYKGR---HI---GA--RGTAIFSFHAIKNITCAEGGIVVTDNP-QFADKLRSLKF 214 (393)
T ss_dssp HHHHHHHHHHTCCBCEECTTCTTCEETTE---ET---TS--SSEEEEECCTTSSSCSSSCEEEEESCH-HHHHHHHHHTB
T ss_pred HHHHHHHHHcCCeEEEECccccCCeECCe---ec---CC--CCeEEEeCCCCCccccccceEEEeCCH-HHHHHHHHHHh
Confidence 3789999999999999999996 344332 11 11 568899999444556679999999742 34332110000
Q ss_pred hhh--hhHHhh-----hhhh--hhc--cCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCC-
Q 047983 80 HSI--SLNMRM-----DDYL--LLS--ESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKP- 147 (233)
Q Consensus 80 ~~~--~~~~~~-----~~~~--~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~- 147 (233)
+.. +....+ ..+. ..+ ...+....+++.. ..+.+++..+..+++++.+.+.|++++ +..+..|
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~----~l~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~ 289 (393)
T 1mdo_A 215 HGLGVDAWDRQSGGRAPQAEVLAPGYKYNLPDLNAAIALA----QLQKLDALNARRAAIAAQYHQAMADLP-FQPLSLPS 289 (393)
T ss_dssp TTEECC-----------CCEESSCCCBCCCCHHHHHHHHH----HHHTHHHHHHHHHHHHHHHHHHHHTSS-CEECCCCS
T ss_pred cCCcccchhhhcccccccccccccCccCCCCHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHhcCC-cccccCCC
Confidence 000 000000 0000 000 0112221222111 112244556666678888888998875 4422222
Q ss_pred ----CccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCccc----------------C-----CCC
Q 047983 148 ----EGSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITV----------------G-----LKD 202 (233)
Q Consensus 148 ----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f----------------~-----~~~ 202 (233)
.+++++| ++++.+.. +. +.+.+.+.|.++||.+.+|..+ . ...
T Consensus 290 ~~~~~~~~~~~---------v~~~~~~~-~~--~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (393)
T 1mdo_A 290 WEHIHAWHLFI---------IRVDEARC-GI--TRDALMASLKTKGIGTGLHFRAAHTQKYYRERFPTLTLPDTEWNSER 357 (393)
T ss_dssp SCEECCCSCEE---------EECCHHHH-SS--CHHHHHHHHHHTTBCCBCCCCCGGGSHHHHHHSTTCCCHHHHHHHTT
T ss_pred CCCCceeEEEE---------EEeccccc-cc--CHHHHHHHHHhCCCCcccccCccccChhhhccCCccCChhHHHHHhC
Confidence 4566788 55541000 11 3444555566789999997643 1 034
Q ss_pred cEEEEeec--CHHHHHHHHHHHHHHHHHHh
Q 047983 203 WLRITFAV--EPSAFEIGLGRMKAFYYRHA 230 (233)
Q Consensus 203 ~~Rl~~~~--~~~~l~~~~~~l~~~l~~~~ 230 (233)
++|+++.. ++++++.+++.|+++++.+.
T Consensus 358 ~lRi~~~~~~t~~~i~~~~~~l~~~~~~~~ 387 (393)
T 1mdo_A 358 ICSLPLFPDMTESDFDRVITALHQIAGQGS 387 (393)
T ss_dssp EEEECCCTTCCHHHHHHHHHHHHHHHC---
T ss_pred EEEecCCCCCCHHHHHHHHHHHHHHHhcCC
Confidence 79999984 89999999999999887764
No 175
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.47 E-value=2.3e-13 Score=115.40 Aligned_cols=187 Identities=10% Similarity=0.019 Sum_probs=112.0
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccC-CccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFG-SIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
+|+++|++||+++|+||+|..+.++..+. ....+. ....-++..|.+|. +.+ ..+|++++++ .+++. +
T Consensus 168 ~i~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~~~~~~~d~~~~s~~K~-g~~-~~~g~l~~~~--~~~~~--~---- 236 (359)
T 1svv_A 168 DISASCKEHGLYLFLDGARLASALSSPVN-DLTLADIARLTDMFYIGATKA-GGM-FGEALIILND--ALKPN--A---- 236 (359)
T ss_dssp HHHHHHHHHTCEEEEECTTHHHHHTSTTC-CCCHHHHHHHCSEEEEECTTT-TCS-SCEEEEECSG--GGCTT--H----
T ss_pred HHHHHHHHhCCEEEEEccchhhhhcCCCc-chhhhhhhhcCCEEEEecccC-CCC-CceEEEEEcc--cHHHH--H----
Confidence 68999999999999999996654332111 111100 01122678889996 543 5689999876 44432 1
Q ss_pred hhhhHHhhhhhhhhccC-cchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEecCC
Q 047983 81 SISLNMRMDDYLLLSES-VYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYCGSE 159 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~ 159 (233)
............ .......++.+++. ...++.++.++++++++.+.| +.+++.. ..|.+++|+|
T Consensus 237 -----~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~l~~~L-~~~~~~~-~~~~~~~~~~----- 301 (359)
T 1svv_A 237 -----RHLIKQRGALMAKGWLLGIQFEVLMKD---NLFFELGAHSNKMAAILKAGL-EACGIRL-AWPSASNQLF----- 301 (359)
T ss_dssp -----HHHHHHTTCCCTTTHHHHHHHHHHTST---THHHHHHHHHHHHHHHHHHHH-HHTTCCB-SSCCSSSEEC-----
T ss_pred -----HHHHhcCCcccccchhhHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHh-ccCCeEE-ccCCccceEE-----
Confidence 111100111111 11111333444433 235678889999999999999 5456654 5678899999
Q ss_pred CcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEee--cCHHHHHHHHHHHHHHHHHH
Q 047983 160 DKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFA--VEPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~--~~~~~l~~~~~~l~~~l~~~ 229 (233)
+.+ ..++..++++++||.+.+ ......+++|++++ .+++++++++++|.+++++.
T Consensus 302 ----~~~----------~~~~~~~l~~~~gi~v~~-~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 358 (359)
T 1svv_A 302 ----PIL----------ENTMIAELNNDFDMYTVE-PLKDGTCIMRLCTSWATEEKECHRFVEVLKRLVAST 358 (359)
T ss_dssp ----BEE----------EHHHHHHHTTTEECEEEE-EETTTEEEEEEECCTTCCHHHHHHHHHHHHHC----
T ss_pred ----EEc----------CHHHHHHHHHhcCEEEEe-cccCCCceEEEEccCcCCHHHHHHHHHHHHHHHhcc
Confidence 443 234555555444999932 11113579999876 38999999999999887653
No 176
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=99.19 E-value=5.6e-15 Score=131.09 Aligned_cols=194 Identities=10% Similarity=0.040 Sum_probs=110.3
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|.++|++||++||+||+|+ +.. +. ..+.+..+....+.||||.++. |+|+||+++++ ++++. +.. .
T Consensus 257 ~~l~~l~~~~g~llI~DEv~~-~r~-g~----~~a~~~~gv~pDi~t~sK~lg~-G~piG~v~~~~--~i~~~--l~~-~ 324 (465)
T 2yky_A 257 DLLRAEASRCGALLIFDEVMT-SRL-SG----GGAQEMLGISADLTTLGKYIGG-GMSFGAFGGRR--DLMER--FDP-A 324 (465)
Confidence 468999999999999999999 733 22 1122222223446699999886 99999999988 55542 110 0
Q ss_pred hhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCC---CcccccCCCccEEEEEec
Q 047983 81 SISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIP---CITCPKKPEGSMFVMYCG 157 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~---~~~~~~~~~~g~~~~~~~ 157 (233)
....+....+++.++..++++++.+ + ..++ ....+.++++.+++.+.|+++. ++.. ..+..|.++|
T Consensus 325 ---~~g~~~~~~T~~~npla~aAa~aaL-~-~l~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~v~g~G~~~~--- 393 (465)
T 2yky_A 325 ---RDGAFAHAGTFNNNILTMSAGHAAL-T-QIYT--RQAASDLSASGDRFRANLNRIAVENQAPL-QFTGLGSLGT--- 393 (465)
Confidence 0000112233444444443444443 1 1111 2345555566666666665531 1211 2334567777
Q ss_pred CCCcccccccc-c--ccC-----CCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeecCHHHHHHHHHHHHHHHHHH
Q 047983 158 SEDKCLLKLNY-S--LLE-----GINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAVEPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 158 ~~~~~~~~~~~-~--~~~-----~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~~~~~l~~~~~~l~~~l~~~ 229 (233)
+.++. + .+. .......+.. .+.++||.+.|+. |+. +++..+++++++++++|.+++++.
T Consensus 394 ------i~~~~~~~~~~~~~~~~d~~~~~~~~~-~ll~~GV~v~p~~-~~~-----~s~~~t~edid~~l~~l~~~l~~~ 460 (465)
T 2yky_A 394 ------IHFSRAPIRSAGDVRAADQQLKELFFF-HMLRKGIYLAPRG-MYA-----LSLEIADAGRDAFAEALADFIGEQ 460 (465)
Confidence 33321 0 000 0001233444 4457899999976 332 777778999999999999998776
Q ss_pred h
Q 047983 230 A 230 (233)
Q Consensus 230 ~ 230 (233)
+
T Consensus 461 ~ 461 (465)
T 2yky_A 461 R 461 (465)
Confidence 4
No 177
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.44 E-value=1.1e-12 Score=116.60 Aligned_cols=211 Identities=9% Similarity=0.000 Sum_probs=121.4
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCcccc-ccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVP-MGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~-~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|+++|++||+++++|++|+.+.+..+.... +..+.. ...+ ..|.+|.++.| +++||++++++..+.+.+...
T Consensus 255 ~~I~~la~~~~~~lhvD~a~g~~~~~~~~~~~~~~g~~~-adsi-~~~~hK~~~~p-~~~G~l~~~~~~~l~~~~~~~-- 329 (486)
T 1js3_A 255 LEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEF-ADSF-NFNPHKWLLVN-FDCSAMWVKRRTDLTGAFKLD-- 329 (486)
T ss_dssp HHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGGG-CSEE-EECHHHHSSCC-SSCEEEEESCHHHHHGGGC----
T ss_pred HHHHHHHHHcCCEEEEehhhHHHHHHCHHHHHHhcCccc-cCee-EEchhhhcCCC-cceEEEEEeCHHHHHHHhcCC--
Confidence 37999999999999999999986653322211 222222 2234 46789986665 899999998731112211000
Q ss_pred hh-hhhHHh----hhhhhhhc--cCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEE
Q 047983 80 HS-ISLNMR----MDDYLLLS--ESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMF 152 (233)
Q Consensus 80 ~~-~~~~~~----~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~ 152 (233)
.. ...... ...+...+ .+......++...+.....+.+++..+.+.++++++.+.|++++++....+|..+++
T Consensus 330 ~~yl~~~~~~~~~~~~~~~~~~~~~rr~~~~~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v 409 (486)
T 1js3_A 330 PVYLKHSHQGSGLITDYRHWQLPLGRRFRSLKMWFVFRMYGVKGLQAYIRKHVQLSHEFEAFVLQDPRFEVCAEVTLGLV 409 (486)
T ss_dssp ----------CCSCCCGGGSSSCSCCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEECSCCCSSEE
T ss_pred chhhCCCcccccCCCCccccCCCCCCchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCceeEE
Confidence 00 000000 00000000 010111112222222224567888889999999999999998877775445777776
Q ss_pred EEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec---CHHHHHHHHHHHHHHHHHH
Q 047983 153 VMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV---EPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~---~~~~l~~~~~~l~~~l~~~ 229 (233)
.| +++... . .+.++..+ |.++|+.+.++..|...+++|+++.. +++++++++++|++++++.
T Consensus 410 ~f----------~~~~~~--~--~~~~l~~~-L~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~~ 474 (486)
T 1js3_A 410 CF----------RLKGSD--G--LNEALLER-INSARKIHLVPCRLRGQFVLRFAICSRKVESGHVRLAWEHIRGLAAEL 474 (486)
T ss_dssp EE----------EESSCH--H--HHHHHHHH-HHHHTSCBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred EE----------EecChH--H--HHHHHHHH-HHhcCCEEEEEEEECCEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 65 122100 0 03344444 44567655444456556799999863 6889999999999988776
Q ss_pred hh
Q 047983 230 AK 231 (233)
Q Consensus 230 ~~ 231 (233)
.+
T Consensus 475 ~~ 476 (486)
T 1js3_A 475 LA 476 (486)
T ss_dssp HC
T ss_pred Hh
Confidence 43
No 178
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.44 E-value=2.2e-13 Score=115.45 Aligned_cols=183 Identities=15% Similarity=0.164 Sum_probs=102.2
Q ss_pred hHHHHHHHcCcEEEEccccCcc--ccCCCccccccccCCccCEEEEccCccccCCCCceEEE-EEecCCCccccccchhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHL--VFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGW-LVTSDPNGILQDLGVAF 78 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~--~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~-~~~~~~~~~~~~~~~~~ 78 (233)
+|+++|++||+++|+||+|... .+.+....++. ...+. ++.|+||.++++ +|| +++++ +++++ .
T Consensus 157 ~i~~~a~~~~~~li~D~a~~~~~~~~~~~~~~~~~--~~~d~--~~~s~sK~l~~~---~G~~~~~~~--~~~~~---~- 223 (347)
T 1jg8_A 157 EICTIAKEHGINVHIDGARIFNASIASGVPVKEYA--GYADS--VMFCLSKGLCAP---VGSVVVGDR--DFIER---A- 223 (347)
T ss_dssp HHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHH--HTCSE--EEEESSSTTCCS---SCEEEEECH--HHHHH---H-
T ss_pred HHHHHHHHCCCEEEeehhhhhcchhhcCCChHHhc--ccccE--EEEecccccCCC---ceEEEEcCH--HHHHH---H-
Confidence 6889999999999999987532 12222111111 12233 334899987654 675 55554 34321 1
Q ss_pred hhhhhhHHhhhhhhhhccCcchHH--HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEEe
Q 047983 79 FHSISLNMRMDDYLLLSESVYTTV--GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMYC 156 (233)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~ 156 (233)
..++.....+....... .+...+ +. +.+.+++ ..++++.+.+.|+++ ++.....|.++.|+|
T Consensus 224 -------~~~~~~~~~~~~~~~~~~~~~~~~l-~~----~~~~~~~-~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~-- 287 (347)
T 1jg8_A 224 -------RKARKMLGGGMRQAGVLAAAGIIAL-TK----MVDRLKE-DHENARFLALKLKEI-GYSVNPEDVKTNMVI-- 287 (347)
T ss_dssp -------HHHHHHHTCCCSSTHHHHHHHHHHH-HH----SSTTHHH-HHHHHHHHHHHHHHH-TCBCCGGGCCSSEEE--
T ss_pred -------HHHHHHcCCchhHHHHHHHHHHHHH-HH----HHHHHHH-HHHHHHHHHHHHHhc-CceeccCCCcceEEE--
Confidence 22222222111122222 222222 11 1112222 234667788888776 443212344566788
Q ss_pred cCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec--CHHHHHHHHHHHHHHHHHH
Q 047983 157 GSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV--EPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~--~~~~l~~~~~~l~~~l~~~ 229 (233)
++++.. +. +..++..++ .++||.+.|+. .+++|+++.. +++++++++++|.+++++.
T Consensus 288 -------~~~~~~---~~-~~~~~~~~l-~~~gi~v~~~~----~~~iRl~~~~~~~~e~i~~~~~~l~~~l~~~ 346 (347)
T 1jg8_A 288 -------LRTDNL---KV-NAHGFIEAL-RNSGVLANAVS----DTEIRLVTHKDVSRNDIEEALNIFEKLFRKF 346 (347)
T ss_dssp -------EECTTS---SS-CHHHHHHHH-HHHTEECEEEE----TTEEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred -------EEcccc---cC-CHHHHHHHH-HHCCCEEecCC----CCeEEEEeCCCCCHHHHHHHHHHHHHHHHhc
Confidence 555421 11 345555554 57899999853 4789999864 8999999999999988653
No 179
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.44 E-value=1.8e-13 Score=120.82 Aligned_cols=196 Identities=17% Similarity=0.174 Sum_probs=113.3
Q ss_pred hHHHHHHHcCcEEEEccccCc----------cccCCCcccccc-c-cCCccCEEEEccCccccCCC-CceEEEEEecCCC
Q 047983 2 CIEETTKKLGIMVIADEVYGH----------LVFGNTHFVPMG-V-FGSIVPVLTLGSISKRWIVP-GWRLGWLVTSDPN 68 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~----------~~~~~~~~~~~~-~-~~~~~~~i~~~s~sK~~~~~-G~R~G~~~~~~~~ 68 (233)
+|+++|++||++||+|+++.. ..+.+.....+. . ....+ +++.|+||.+++| | ||+++++
T Consensus 208 ~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~~~~~~~~~~~~~~d--~~~~s~sK~~g~~~G---g~~~~~~-- 280 (467)
T 2oqx_A 208 AMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETYKYAD--MLAMSAKKDAMVPMG---GLLCMKD-- 280 (467)
T ss_dssp HHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHHHHHHHHGGGCS--EEEEESSSTTCCSSC---EEEEECS--
T ss_pred HHHHHHHHcCCEEEEEchhhhhhhhhcccccccccCccHHHHhhhhhccCC--eEEEecccccCCCCc---eEEEecC--
Confidence 689999999999999955432 223332211111 0 01112 3478999998877 6 8888876
Q ss_pred c-cccccchhhhhhhhhHHhhhhhhhhc-----cCcchHHHHHHHHhhhcHHHHHH-HHHHHHHHHHHHHHHHhhcCCCc
Q 047983 69 G-ILQDLGVAFFHSISLNMRMDDYLLLS-----ESVYTTVGAVPQILEKTEEEFFS-KITDILREAADICCDRLKEIPCI 141 (233)
Q Consensus 69 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~l~~~L~~~~~~ 141 (233)
. +++ .. .+++.....+ .+.... .+++++ .....++++ +..+...++++.+.+.|+++ ++
T Consensus 281 ~~~~~---~~--------~~~~~~~~~~~~~~~~~~~~~-~~~~al-~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~-~~ 346 (467)
T 2oqx_A 281 DSFFD---VY--------TECRTLCVVQEGFPTYGGLEG-GAMERL-AVGLYDGMNLDWLAYRIAQVQYLVDGLEEI-GV 346 (467)
T ss_dssp GGGHH---HH--------HHHHHHHHHTTSSCCCCCCCH-HHHHHH-HHHHHHTTCHHHHHHHHHHHHHHHHHHHHT-TC
T ss_pred hhHHH---HH--------HHHHHhhhccCCcccccchhh-hHHHHH-HHhhHhhhhHHHHHHHHHHHHHHHHHHHHC-CC
Confidence 3 332 22 2233221111 111122 222222 111122221 23344567888999999887 56
Q ss_pred ccccCCCccEEEEEecCCCcccccccccccCCCCC----hHHHHHHHHhccCEEEECCccc--C-----------CCCcE
Q 047983 142 TCPKKPEGSMFVMYCGSEDKCLLKLNYSLLEGINS----DTEFALKLAKEESIIVLPGITV--G-----------LKDWL 204 (233)
Q Consensus 142 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ll~~~gi~v~pg~~f--~-----------~~~~~ 204 (233)
.. . |.+++++| +.++.. .++..+ ...++.+++.++||.+.|++.| + ..+++
T Consensus 347 ~~-~-~~~~~~~~---------~~~~~~-~~~~~~~~~~~~~l~~~L~~~~gv~~~~~~~~~~~~~~~~g~~~~~~~~~i 414 (467)
T 2oqx_A 347 VC-Q-QAGGHAAF---------VDAGKL-LPHIPADQFPAQALACELYKVAGIRAVEIGSFLLGRDPKTGKQLPCPAELL 414 (467)
T ss_dssp CE-E-EECSSCEE---------EEHHHH-STTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEE
T ss_pred ee-e-cCCceEEE---------Eechhh-cccCCcccccHHHHHHHHHHhcCceecccccccccccccccccccCccCeE
Confidence 54 4 77889999 444210 001110 2223555548889999996543 2 13799
Q ss_pred EEEee---cCHHHHHHHHHHHHHHHHHHh
Q 047983 205 RITFA---VEPSAFEIGLGRMKAFYYRHA 230 (233)
Q Consensus 205 Rl~~~---~~~~~l~~~~~~l~~~l~~~~ 230 (233)
|+++. .+++++++++++|.+++++..
T Consensus 415 Rl~~~~~~~t~e~i~~~~~~l~~~l~~~~ 443 (467)
T 2oqx_A 415 RLTIPRATYTQTHMDFIIEAFKHVKENAA 443 (467)
T ss_dssp EECCCTTTSCHHHHHHHHHHHHHHHHSGG
T ss_pred EEEecCCCCCHHHHHHHHHHHHHHHhhhh
Confidence 99998 679999999999999987643
No 180
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.43 E-value=5.1e-12 Score=112.78 Aligned_cols=197 Identities=16% Similarity=0.099 Sum_probs=124.3
Q ss_pred ChHHHHHHHcCcEEEEccccC-ccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCcccc--c----
Q 047983 1 FCIEETTKKLGIMVIADEVYG-HLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQ--D---- 73 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~-~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~--~---- 73 (233)
++|.++|++||+++++|+++. +++..+..+.++. .. + +++.|++|++ .|.|.|++++++ .+.+ +
T Consensus 221 ~~i~~ia~~~g~~livD~Ah~~glv~~g~~~~~~~--~a-D--iv~~S~hK~l--~Gp~GG~i~~~~--~~~~~~~~~~~ 291 (490)
T 2a7v_A 221 ARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFK--HA-D--IVTTTTHKTL--RGARSGLIFYRK--GVKAVDPKTGR 291 (490)
T ss_dssp HHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGGG--TC-S--EEEEESSGGG--CSCSCEEEEEEC--SEEEEETTTEE
T ss_pred HHHHHHHHHcCCEEEEccccccccccCCcCCCCCC--CC-C--EEEECCcccC--ccccchheeecc--chhcccccccc
Confidence 378999999999999999975 5555554333442 11 2 7889999986 366779999987 2210 0
Q ss_pred ---cchhhhhhhhhHHhhhhhhhh--ccCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCC
Q 047983 74 ---LGVAFFHSISLNMRMDDYLLL--SESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKP 147 (233)
Q Consensus 74 ---~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 147 (233)
..+. .+++..... ..+++... ++++..+.....+..++.++++.++++++.+.|++. ++.....+
T Consensus 292 ~~~~~l~--------~~i~~~~~~g~qggp~~~~iaAla~Al~~~~~~~~~~~~~~~~~na~~L~~~L~~~-G~~v~~~~ 362 (490)
T 2a7v_A 292 EIPYTFE--------DRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLER-GYSLVSGG 362 (490)
T ss_dssp EEECCCH--------HHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGS
T ss_pred hhhHHHH--------HHHHHHhcccCCCCchHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHc-CcEEecCC
Confidence 0122 344433221 11222222 444433322222345778899999999999999886 55542233
Q ss_pred CccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC-----CCcEEEEee------cCHHHHH
Q 047983 148 EGSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL-----KDWLRITFA------VEPSAFE 216 (233)
Q Consensus 148 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~-----~~~~Rl~~~------~~~~~l~ 216 (233)
...+++| +.+ +.. ++ +...+.+.|++.||.+.++..++. .+.+|++.. .++++++
T Consensus 363 t~t~lv~---------vdl--~~~-g~--~~~~~~~~L~~~GI~v~~~~~p~d~~p~~~~~iRig~~a~t~~g~~~~d~~ 428 (490)
T 2a7v_A 363 TDNHLVL---------VDL--RPK-GL--DGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFR 428 (490)
T ss_dssp CSSSEEE---------EEC--TTT-TC--CHHHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHH
T ss_pred CCCeEEE---------EEe--CCC-CC--CHHHHHHHHHhCCeEEecCccCCCCCCCCCCceEecccccccCCCCHHHHH
Confidence 4567788 433 221 22 456677888899999986544432 478999663 2688999
Q ss_pred HHHHHHHHHHHHH
Q 047983 217 IGLGRMKAFYYRH 229 (233)
Q Consensus 217 ~~~~~l~~~l~~~ 229 (233)
++.+.|.+++...
T Consensus 429 ~~~~~i~~~l~~~ 441 (490)
T 2a7v_A 429 RVVDFIDEGVNIG 441 (490)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhh
Confidence 9998888887643
No 181
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.42 E-value=2.9e-12 Score=111.24 Aligned_cols=58 Identities=22% Similarity=0.253 Sum_probs=47.6
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceE-EEEEecC
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRL-GWLVTSD 66 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~-G~~~~~~ 66 (233)
++|+++|++||+++|+||+|..+.+.. ++ ..+..+++.|+||.++++|.|+ ||+++++
T Consensus 170 ~~i~~l~~~~~~~li~D~~~~~~~~~~----~~----~~~~d~~~~S~sK~~~~~~~~~~G~l~~~~ 228 (398)
T 1gc0_A 170 AGVAKIARKHGATVVVDNTYCTPYLQR----PL----ELGADLVVHSATKYLSGHGDITAGIVVGSQ 228 (398)
T ss_dssp HHHHHHHGGGTCEEEEECTTTHHHHCC----GG----GGTCSEEEEETTTTTTCSSSCCCEEEEECH
T ss_pred HHHHHHHHHcCCEEEEECCCcccccCC----ch----hhCceEEEECCccccCCCCCCeEEEEEECh
Confidence 378999999999999999999765432 12 1235589999999999999998 9999886
No 182
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.42 E-value=1.8e-12 Score=115.72 Aligned_cols=210 Identities=15% Similarity=0.077 Sum_probs=121.7
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|+++|++||+++++|++|+.+.+..+....+..+.. .-+++.|++|.++.| .++||++++++ ..++. +.. .
T Consensus 278 ~~I~~l~~~~~~~l~vD~a~~~~~~~~~~~~~~~gi~~--~D~i~~s~hK~l~~p-~~~G~l~~~~~-~~~~~--~~~-~ 350 (497)
T 2qma_A 278 DFIADMAVKHDMWMHVDGAYGGALILSSHKSRLKGVER--AHSISVDFHKLFYQT-ISCGALLVNDK-SNFKF--LLH-H 350 (497)
T ss_dssp HHHHHHHHHHTCEEEEEETTGGGGGGSTTGGGGTTGGG--CSEEEEETTTTTCCC-SSCEEEEESCG-GGGGG--GCC--
T ss_pred HHHHHHHHHcCCEEEEehhhhHHHHhCcchHhhcCccc--CCEEEEcchhccCCC-cceEEEEEeCH-HHHHH--hcC-C
Confidence 37899999999999999999987764431111222211 126677899986766 69999999874 22221 110 0
Q ss_pred hhhhHHh---hhhhhhhcc--CcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEE
Q 047983 81 SISLNMR---MDDYLLLSE--SVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMY 155 (233)
Q Consensus 81 ~~~~~~~---~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~ 155 (233)
...+... .......+. +....+..+...+.....+.+++..+.+.++++++.+.|++++++..+.+|.++++.+
T Consensus 351 ~~yl~~~~~~~~~~~~~~~~~~r~~~al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f- 429 (497)
T 2qma_A 351 ADYLNREHDELPNLVDKSIATTKRFDALKVFMTMQNVGPKALGDMYDHLLAQTLEVADMIRTNDQFELLAEPSLSTVLF- 429 (497)
T ss_dssp -------------------CCSCCCTHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHTCTTEEECSCCSSSEEEE-
T ss_pred chhcCCccccCCCccccCCCCCCchhHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEcCCCceEEEE-
Confidence 0000000 000000000 0000011111112222345677888889999999999999887776544666665544
Q ss_pred ecCCCcccccccccccCCCCCh-HHHHHHHHhccCEEEECCcccCCCCcEEEEee---cCHHHHHHHHHHHHHHHHHH
Q 047983 156 CGSEDKCLLKLNYSLLEGINSD-TEFALKLAKEESIIVLPGITVGLKDWLRITFA---VEPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~---~~~~~l~~~~~~l~~~l~~~ 229 (233)
++.... ...+. ...+...+.+.|+.+.++..+...+++|+++. .++++++++++.|.+++++.
T Consensus 430 ---------~~~~~~--~~~~~l~~~l~~~l~~~G~~~~~~~~~~g~~~lRis~~~~~~t~edi~~~~~~l~~~~~~~ 496 (497)
T 2qma_A 430 ---------RATHET--ADLDELNKALRLEALTRGIAVLGETIVDGKTALKFTILNPCLTTSDFESLLSKINMLAVEL 496 (497)
T ss_dssp ---------EECCSS--SCHHHHHHHHHHHHHHHTSCBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred ---------EEcCCc--cCHHHHHHHHHHHHHhCCCEEEEeeEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHhh
Confidence 221110 00000 12344556677998887666665679999983 38999999999999988754
No 183
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.42 E-value=1.8e-12 Score=109.30 Aligned_cols=58 Identities=17% Similarity=0.175 Sum_probs=47.7
Q ss_pred ChHHHHHHH-cCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCce-EEEEEecC
Q 047983 1 FCIEETTKK-LGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWR-LGWLVTSD 66 (233)
Q Consensus 1 ~~i~~l~~~-~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R-~G~~~~~~ 66 (233)
++|.++|++ +|+++|+||+|..+.+.. ++ ..++.+++.|+||.+++||.| +||+++++
T Consensus 103 ~~i~~~~~~~~~~~li~D~a~~~~~~~~----~~----~~~~d~~~~s~~K~~~~~~~r~~G~~~~~~ 162 (331)
T 1pff_A 103 EDAVKQARKQKDILVIVDNTFASPILTN----PL----DLGVDIVVHSATKYINGHTDVVAGLVCSRA 162 (331)
T ss_dssp HHHHHHHTTSSSCEEEEECTTTHHHHCC----GG----GGTCSEEEEETTTTTSSSSSCCCEEEEECH
T ss_pred HHHHHHHhhhcCCEEEEECCCcccccCC----hh----hcCCcEEEEECccccCCCCCceEEEEEeCc
Confidence 368999999 999999999999765431 22 235679999999999999999 89999875
No 184
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.42 E-value=2.3e-12 Score=113.71 Aligned_cols=195 Identities=17% Similarity=0.143 Sum_probs=110.2
Q ss_pred hHHHHHHHcCcEEEEccccCc--c--------ccCCCccccccccC----CccCEEEEccCccccCCC-CceEEEEEecC
Q 047983 2 CIEETTKKLGIMVIADEVYGH--L--------VFGNTHFVPMGVFG----SIVPVLTLGSISKRWIVP-GWRLGWLVTSD 66 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~--~--------~~~~~~~~~~~~~~----~~~~~i~~~s~sK~~~~~-G~R~G~~~~~~ 66 (233)
+|+++|++||++||+||++.. . .+.+. ++..+. .... +++.|+||.++++ | ||+++++
T Consensus 208 ~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~d-~~~~s~sK~~g~~~G---g~~~~~d 280 (467)
T 1ax4_A 208 EVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNA---TIKEVIFDMYKYAD-ALTMSAKKDPLLNIG---GLVAIRD 280 (467)
T ss_dssp HHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTC---CHHHHHHHHGGGCS-EEEEETTSTTCCSSC---EEEEESS
T ss_pred HHHHHHHHcCCEEEEEchhhhhcchhccccccccCCC---chhhhhhhhccccc-eEEEeccccCCCCcc---eEEEeCC
Confidence 689999999999999998543 1 12221 222221 1111 4568999998776 5 7777764
Q ss_pred CCccccccchhhhhhhhhHHhhhhhh-hh-ccCcchHH--HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 047983 67 PNGILQDLGVAFFHSISLNMRMDDYL-LL-SESVYTTV--GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCIT 142 (233)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 142 (233)
..++++. + ....... .. ..+..+.. .+++..++...+ .+..+...++++.+.+.|++ .++.
T Consensus 281 ~~~l~~~--~---------~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~L~~-~~~~ 345 (467)
T 1ax4_A 281 NEEIFTL--A---------RQRCVPMEGFVTYGGLAGRDMAAMVQGLEEGTE---EEYLHYRIGQVKYLGDRLRE-AGIP 345 (467)
T ss_dssp CHHHHHH--H---------HHHHHHHTCSTTTTTCCHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHHHHHHHH-TTCC
T ss_pred HHHHHHH--H---------HhhccccccccccCCccchHHHHHHHHHHHhhh---hhHHHHHHHHHHHHHHHHHh-CCCC
Confidence 2023321 1 1111110 00 11111111 222222221111 11222233667788888877 3555
Q ss_pred cccCCCccEEEEEecCCCccccccc-----ccccCCCCChHHHHHHHHhccCEEEEC-Cccc-C-----------CCCcE
Q 047983 143 CPKKPEGSMFVMYCGSEDKCLLKLN-----YSLLEGINSDTEFALKLAKEESIIVLP-GITV-G-----------LKDWL 204 (233)
Q Consensus 143 ~~~~~~~g~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ll~~~gi~v~p-g~~f-~-----------~~~~~ 204 (233)
. ..|.+|+++| +.+. .+. .+. +..+++.++++++||.+.| |+.+ + ..+++
T Consensus 346 ~-~~~~~~~~~~---------~~~~~~~~~~~~-~~~-~~~~l~~~L~~~~gv~v~~~g~~~~~~~~~~g~~~~~~~~~i 413 (467)
T 1ax4_A 346 I-QYPTGGHAVF---------VDCKKLVPQIPG-DQF-PAQAVINALYLESGVRAVEIGSFLLGRDPATGEQKHADMEFM 413 (467)
T ss_dssp B-CSSCCSSEEE---------EESTTTCTTSCG-GGC-HHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEE
T ss_pred c-ccCCCceEEE---------Eehhhhcccccc-CCC-CHHHHHHHHHHhcCceeeecCccccccccccccccccccceE
Confidence 3 5788999999 4411 111 011 2455666665889999999 6543 1 13789
Q ss_pred EEEee---cCHHHHHHHHHHHHHHHHHHh
Q 047983 205 RITFA---VEPSAFEIGLGRMKAFYYRHA 230 (233)
Q Consensus 205 Rl~~~---~~~~~l~~~~~~l~~~l~~~~ 230 (233)
|+++. .+++++++++++|.+++++..
T Consensus 414 Rls~~~~~~t~e~i~~~~~~l~~~~~~~~ 442 (467)
T 1ax4_A 414 RLTIARRVYTNDHMDYIADALIGLKEKFA 442 (467)
T ss_dssp EEECCTTSSCHHHHHHHHHHHHTTHHHHT
T ss_pred EEecccccCCHHHHHHHHHHHHHHHHhhh
Confidence 99998 479999999999999887753
No 185
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.42 E-value=1.4e-12 Score=114.20 Aligned_cols=185 Identities=12% Similarity=0.041 Sum_probs=108.3
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCC-ceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|+++|+++|++||+||+|....+.. ++ .....+++.|+||.++.+| +|+||+++++ ..+.
T Consensus 186 ~~i~~la~~~g~~livDe~~~~~~~~~----~~----~~g~div~~S~sK~l~~~G~~~~G~vv~~~--~~~~------- 248 (414)
T 3ndn_A 186 AAVTELAHAAGAKVVLDNVFATPLLQQ----GF----PLGVDVVVYSGTKHIDGQGRVLGGAILGDR--EYID------- 248 (414)
T ss_dssp HHHHHHHHHTTCEEEEECTTTHHHHCC----CG----GGTCSEEEEETTTTTTCSSCCCCEEEEECH--HHHT-------
T ss_pred HHHHHHHHHcCCEEEEECCCcccccCC----ch----hcCCCeEeccCCccccCCCCceEEEEEECH--HHHH-------
Confidence 378999999999999999998533221 12 1123488999999999988 9999999987 3332
Q ss_pred hhhhhHHhhhhh-hhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCC----------
Q 047983 80 HSISLNMRMDDY-LLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPE---------- 148 (233)
Q Consensus 80 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~---------- 148 (233)
..++.. ...+...++...+ ..+ ...+.+....+...++++.+.+.|++.+.+.....|.
T Consensus 249 ------~~l~~~~~~~g~~~~~~~a~-~~~---~~l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~ 318 (414)
T 3ndn_A 249 ------GPVQKLMRHTGPAMSAFNAW-VLL---KGLETLAIRVQHSNASAQRIAEFLNGHPSVRWVRYPYLPSHPQYDLA 318 (414)
T ss_dssp ------THHHHHHHHHCCCCCHHHHH-HHH---HHGGGHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHH
T ss_pred ------HHHHHHHHHcCCCCCHHHHH-HHH---HHHHHHHHHHHHHHHHHHHHHHHHhcCCCEeEEECCCCCCCcCHHHH
Confidence 122211 1222223333211 111 1223345556677788889999998766543212221
Q ss_pred ------ccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccC-----------------------
Q 047983 149 ------GSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVG----------------------- 199 (233)
Q Consensus 149 ------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~----------------------- 199 (233)
.|..+| +.++-... ........+...++..++.+.+|+.+.
T Consensus 319 ~~~~~g~G~~l~---------~~l~~~~~-~~~~~~~~~~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~g~ 388 (414)
T 3ndn_A 319 KRQMSGGGTVVT---------FALDCPED-VAKQRAFEVLDKMRLIDISNNLGDAKSLVTHPATTTHRAMGPEGRAAIGL 388 (414)
T ss_dssp HHHCSSCCSEEE---------EEECSCGG-GHHHHHHHHHHHCSSSEECSCCSCSSCEEECGGGTTTCTTHHHHHHHTTC
T ss_pred HHhCCCCceEEE---------EEEcCCcc-ccHHHHHHHHHhCccceEcCCCCCCCceeeCccccccccCCHHHHHhcCC
Confidence 466777 55532100 000134455566667788888877542
Q ss_pred CCCcEEEEeec-CHHHHHHHHHHHHHH
Q 047983 200 LKDWLRITFAV-EPSAFEIGLGRMKAF 225 (233)
Q Consensus 200 ~~~~~Rl~~~~-~~~~l~~~~~~l~~~ 225 (233)
.++++|+|++. +.+ ..++.|.++
T Consensus 389 ~~~~iRlsvG~e~~~---dli~dl~~a 412 (414)
T 3ndn_A 389 GDGVVRISVGLEDTD---DLIADIDRA 412 (414)
T ss_dssp CTTEEEEECCSSCHH---HHHHHHHHH
T ss_pred CCCeEEEEeCcCCHH---HHHHHHHHh
Confidence 15789999997 344 444444443
No 186
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.42 E-value=1.4e-12 Score=113.55 Aligned_cols=203 Identities=18% Similarity=0.182 Sum_probs=114.1
Q ss_pred ChHHHHHHHcCcEEEEccccCccc-cCCCccccccccCCccCEEEEccC--ccccCCCCceEEEEEecCCCccccccchh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLV-FGNTHFVPMGVFGSIVPVLTLGSI--SKRWIVPGWRLGWLVTSDPNGILQDLGVA 77 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~-~~~~~~~~~~~~~~~~~~i~~~s~--sK~~~~~G~R~G~~~~~~~~~~~~~~~~~ 77 (233)
++|+++|++||++||+||+|..+. +++.. +..+. + +.+.|| ||.++. | |.||++++++ .+++.+
T Consensus 147 ~~i~~~~~~~~~~li~D~a~~~~~~~~~~~---~~~~~--~--~~~~s~s~~K~~~~-g-~~g~~~~~~~-~l~~~~--- 213 (418)
T 2c81_A 147 DEINEIAQEHNLFVIEDCAQSHGSVWNNQR---AGTIG--D--IGAFSCQQGKVLTA-G-EGGIIVTKNP-RLFELI--- 213 (418)
T ss_dssp HHHHHHHHHTTCEEEEECTTCTTCEETTEE---TTSSS--S--EEEEECCTTSSSCS-S-SCEEEEESCH-HHHHHH---
T ss_pred HHHHHHHHHCCCEEEEECcccccCccCCEe---ccccc--c--eEEEeccCCcccCC-C-CeEEEEECCH-HHHHHH---
Confidence 378999999999999999999986 54422 11111 2 667777 999877 8 9999999642 333211
Q ss_pred hhhhhhhHHhhhhhhh------------hc--c---C---cchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhh
Q 047983 78 FFHSISLNMRMDDYLL------------LS--E---S---VYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLK 136 (233)
Q Consensus 78 ~~~~~~~~~~~~~~~~------------~~--~---~---~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~ 136 (233)
........ +. . . ..... ...+++. ....+.+++..+..+++++++.+.|+
T Consensus 214 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~-~~~l~~~~~~~~~~~~~~~~l~~~L~ 284 (418)
T 2c81_A 214 --------QQLRADSRVYCDDSSELMHGDMQLVKKGDIQGSNYCLSEFQSAIL-LDQLQELDDKNAIREKNAMFLNDALS 284 (418)
T ss_dssp --------HHHHBTTEEECSCGGGCCTTCBSEEECCSSCCCBCCCCHHHHHHH-HHHHTTHHHHHHHHHHHHHHHHHHHT
T ss_pred --------HHHHHhCccccccccccccchhhccccccccCcCCCcCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 11111100 00 0 0 00000 1111111 11123456667777788889999998
Q ss_pred cCCCcccccCCCc-cEEEEEecCCCcccccccccccCCCCChHHHHHHHHhcc-CEE---EECCccc-------------
Q 047983 137 EIPCITCPKKPEG-SMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEE-SII---VLPGITV------------- 198 (233)
Q Consensus 137 ~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~-gi~---v~pg~~f------------- 198 (233)
+++++..+..|++ +...|.++ .+.++.....+. +.+.+.+.|.++ ||. +.+|..-
T Consensus 285 ~~~g~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~--~~~~l~~~L~~~~gI~~~~v~~~~~p~~~~~~~~~~~~~ 357 (418)
T 2c81_A 285 KIDGIKVMKRPPQVSRQTYYGY-----VFRFDPVKFGGL--NADQFCEILREKLNMGTFYLHPPYLPVHKNPLFCPWTKN 357 (418)
T ss_dssp TSTTEEECCCCTTEEECCCSEE-----EEEECGGGTTTC--CHHHHHHHHHHHHTCCTTTEECCCCCGGGCTTCCGGGCT
T ss_pred cCCCcccCCCCCCCcccccEEE-----EEEEcccccccc--CHHHHHHHHHHcCCCCcccccccccccccCchhcccccc
Confidence 8877664335655 33222000 012321000012 334444455566 999 8887511
Q ss_pred ---------------CC--------CCcEEEEee--c-CHHHHHHHHHHHHHHHHHHhhc
Q 047983 199 ---------------GL--------KDWLRITFA--V-EPSAFEIGLGRMKAFYYRHAKK 232 (233)
Q Consensus 199 ---------------~~--------~~~~Rl~~~--~-~~~~l~~~~~~l~~~l~~~~~~ 232 (233)
+. .+.+|+++. . ++++++.+++.|++++++...+
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~gt~edi~~~~~~l~~~~~~~~~~ 417 (418)
T 2c81_A 358 RYLKSVRKTEAYWRGLHYPVSERASGQSIVIHHAILLAEPSHLSLLVDAVAELARKFCVT 417 (418)
T ss_dssp TSCHHHHCCHHHHHTCCCHHHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHHHHHHTTC--
T ss_pred cccccccccccccccCCChHHHHHHhCEEEecCCccCCCHHHHHHHHHHHHHHHHhhccC
Confidence 00 147999996 3 7889999999999988766543
No 187
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.40 E-value=3.6e-12 Score=111.28 Aligned_cols=197 Identities=12% Similarity=0.047 Sum_probs=112.2
Q ss_pred ChHHHHHHHcC----------cEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCcc
Q 047983 1 FCIEETTKKLG----------IMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGI 70 (233)
Q Consensus 1 ~~i~~l~~~~~----------~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~ 70 (233)
++|.++|++++ ++||+||+|+... .+..+..... . +++.|+||.+ |.|+||+++++. .
T Consensus 195 ~~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~----~~~~~~~~~~--d-~~~~s~~K~~---g~~~G~~~~~~~--~ 262 (432)
T 3a9z_A 195 SEISRRIKALNQIRAASGLPRVLVHTDAAQALGK----RRVDVEDLGV--D-FLTIVGHKFY---GPRIGALYVRGV--G 262 (432)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTT----SCCCHHHHCC--S-EEEEEGGGTT---CCSCEEEEETTB--T
T ss_pred HHHHHHHHhcCcccccccCCceEEEEEchhhhCC----cccChhhcCC--C-EEEEehhHhc---CCcceEEEEccc--c
Confidence 37899999999 9999999997632 2222322222 2 5689999975 467999999872 2
Q ss_pred -ccccchhhhhhhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccc-cCC-
Q 047983 71 -LQDLGVAFFHSISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCP-KKP- 147 (233)
Q Consensus 71 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~- 147 (233)
.+. +.... .+ ..........+.+...+ .++.+.++ ...+++++.++.++++++++.+.|++++++... ..|
T Consensus 263 ~~~~--~~~~~-~~-~~~~~~~~~~~~~~~~~-~a~~aal~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~ 336 (432)
T 3a9z_A 263 KLTP--LYPML-FG-GGQERNFRPGTENTPMI-AGLGKAAD-LVSENCETYEAHMRDIRDYLEERLEAEFGKRIHLNSRF 336 (432)
T ss_dssp TTBC--CCCSC-CS-SCGGGGTSCSCCCHHHH-HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGEEESSCC
T ss_pred ccCC--cCcee-ec-CCccccccCCCcCHHHH-HHHHHHHH-HHHhhHHHHHHHHHHHHHHHHHHHHhccCCcEEEeCCC
Confidence 211 11000 00 00001111112222222 33333332 223467888999999999999999875333211 122
Q ss_pred ----CccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC--------------------CCc
Q 047983 148 ----EGSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL--------------------KDW 203 (233)
Q Consensus 148 ----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--------------------~~~ 203 (233)
..+..++ +.++.. +. +..+.. ..+ .++.+.+|..+.+ .++
T Consensus 337 ~~~~~~~~~~~---------~~~~~~---~~-~~~~~~-~~l--~~i~~~~G~~~~~~~~~~~~~~l~~~g~~~~~~~~~ 400 (432)
T 3a9z_A 337 PGVERLPNTCN---------FSIQGS---QL-RGYMVL-AQC--QTLLASVGASCHSDHEDRPSPVLLSCGIPVDVARNA 400 (432)
T ss_dssp TTCCBCTTEEE---------EEECST---TC-CHHHHH-HHC--SSEECBSSCGGGGGGTTSCCHHHHHTTCCHHHHTTE
T ss_pred CcccCCCCEEE---------EEeCCC---CC-cHHHHH-HHh--cCeEEeccccccCCCCCCccHHHHhcCCCccccCce
Confidence 1222333 222210 11 133332 323 3788777765421 378
Q ss_pred EEEEeec--CHHHHHHHHHHHHHHHHHHhh
Q 047983 204 LRITFAV--EPSAFEIGLGRMKAFYYRHAK 231 (233)
Q Consensus 204 ~Rl~~~~--~~~~l~~~~~~l~~~l~~~~~ 231 (233)
+|++++. +++++++++++|++++++.++
T Consensus 401 iRis~~~~~t~eei~~~~~~l~~~~~~~~~ 430 (432)
T 3a9z_A 401 VRLSVGRSTTRAEVDLIVQDLKQAVNQLEG 430 (432)
T ss_dssp EEEECCTTCCHHHHHHHHHHHHHHHHHHHS
T ss_pred EEEEcCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 9999996 799999999999999987654
No 188
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.39 E-value=2.4e-12 Score=109.98 Aligned_cols=192 Identities=9% Similarity=0.040 Sum_probs=113.4
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCc--cccCCCCceEEEEEecCCCccccccchhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSIS--KRWIVPGWRLGWLVTSDPNGILQDLGVAF 78 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~R~G~~~~~~~~~~~~~~~~~~ 78 (233)
++|.++|++||+++|+||+|+....... ..++... .+.+.|+| |.++. | +||+++.+.+++++. +
T Consensus 138 ~~i~~l~~~~~~~li~D~a~~~~~~~~~-----~~~~~~~-~i~~~s~s~~K~~~~-g--~g~~~~~~~~~~~~~--~-- 204 (375)
T 2fnu_A 138 ESVQKLCKKHSLSFLSDSSHALGSEYQN-----KKVGGFA-LASVFSFHAIKPITT-A--EGGAVVTNDSELHEK--M-- 204 (375)
T ss_dssp HHHHHHHHHHTCEEEEECTTCTTCEETT-----EETTSSS-SEEEEECCTTSSSCC-S--SCEEEEESCHHHHHH--H--
T ss_pred HHHHHHHHHcCCEEEEECccccCCeECC-----eeccccC-CeEEEeCCCCCCccc-c--CceEEEeCCHHHHHH--H--
Confidence 3789999999999999999987543211 1122212 37788888 98765 6 788888532134321 1
Q ss_pred hhhhhhHHhhhhhhh------------hccC-cchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccc
Q 047983 79 FHSISLNMRMDDYLL------------LSES-VYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPK 145 (233)
Q Consensus 79 ~~~~~~~~~~~~~~~------------~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 145 (233)
........ .+.+ ......+...+. ..+++++..+.++++++++.+.|++++++.. .
T Consensus 205 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~---~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~ 273 (375)
T 2fnu_A 205 -------KLFRSHGMLKKDFFEGEVKSIGHNFRLNEIQSALGLS---QLKKAPFLMQKREEAALTYDRIFKDNPYFTP-L 273 (375)
T ss_dssp -------HHHTBTTEEESSSSCEEESSCCCBCCCCHHHHHHHHH---HHTTHHHHHHHHHHHHHHHHHHHTTCSSEEE-S
T ss_pred -------HHHHhcCCccccccccccccccccCCCCHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHhhcCCCccc-c
Confidence 11111000 1111 112221222221 1235567788899999999999998876654 2
Q ss_pred CC----Cc-cEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEEC----Cc---ccC-------C------
Q 047983 146 KP----EG-SMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLP----GI---TVG-------L------ 200 (233)
Q Consensus 146 ~~----~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~p----g~---~f~-------~------ 200 (233)
.+ .+ ++++| +.++... . .+...+.+.|.++||.+.+ +. .|+ .
T Consensus 274 ~~~~~~~~~~~~~~---------~~~~~~~---~-~~~~~l~~~L~~~gi~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 340 (375)
T 2fnu_A 274 HPLLKDKSSNHLYP---------ILMHQKF---F-TCKKLILESLHKRGILAQVHYKPIYQYQLYQQLFNTAPLKSAEDF 340 (375)
T ss_dssp GGGCSSCCCCSCEE---------EEECGGG---G-GGHHHHHHHHHHTTEECBCCCCCGGGSHHHHHHHCCCCCHHHHHH
T ss_pred CCCCCCCcceEEEE---------EEeCccc---c-chHHHHHHHHHHCCCCccccccccccchhhhcCCCccCChHHHHH
Confidence 33 12 34446 4443210 0 0234445556688999983 22 121 0
Q ss_pred -CCcEEEEeec--CHHHHHHHHHHHHHHHHHH
Q 047983 201 -KDWLRITFAV--EPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 201 -~~~~Rl~~~~--~~~~l~~~~~~l~~~l~~~ 229 (233)
.+++|+++.. ++++++++++.|++++++.
T Consensus 341 ~~~~lRi~~~~~~t~~~i~~~~~~l~~~~~~~ 372 (375)
T 2fnu_A 341 YHAEISLPCHANLNLESVQNIAHSVLKTFESF 372 (375)
T ss_dssp HHHEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HhCEEEecCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 2679999985 7899999999999988765
No 189
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.38 E-value=1.3e-12 Score=111.70 Aligned_cols=191 Identities=13% Similarity=0.131 Sum_probs=112.7
Q ss_pred ChHHHHHHHcCcEEEEccccCccc-cCCCccccccccCCccCEEEEccCc--cccCCCCceEEEEEecCCCccccccchh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLV-FGNTHFVPMGVFGSIVPVLTLGSIS--KRWIVPGWRLGWLVTSDPNGILQDLGVA 77 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~-~~~~~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~R~G~~~~~~~~~~~~~~~~~ 77 (233)
++|.++|++||+++|+||+|..+. +++..... . . .+++.|+| |.++.+|. .||+++++. .+.+. +
T Consensus 142 ~~i~~~~~~~~~~li~D~~~~~g~~~~~~~~~~---~-~---d~~~~s~~~~K~l~~~g~-~g~~~~~~~-~~~~~---~ 209 (374)
T 3uwc_A 142 PALAKIAKKHNLHIVEDACQTILGRINDKFVGS---W-G---QFACFSLHPLKNLNVWSD-AGVIITHSD-EYAEK---L 209 (374)
T ss_dssp HHHHHHHHHTTCEEEEECTTCTTCEETTEETTS---S-S---SEEEEECSSSSSSCCSSC-CEEEEESCH-HHHHH---H
T ss_pred HHHHHHHHHcCCEEEEeCCCccCceeCCeeccc---c-c---cEEEEeCCCCCcCCccce-eEEEEeCCH-HHHHH---H
Confidence 378999999999999999999753 22221111 1 1 26677755 99776565 899888762 22211 1
Q ss_pred hhhhhhhHHhhhhh----------hhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCC-cccccC
Q 047983 78 FFHSISLNMRMDDY----------LLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPC-ITCPKK 146 (233)
Q Consensus 78 ~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~-~~~~~~ 146 (233)
..+... ...+........++... ..+.+++..+..+++.+.+.+.|+++++ +..+..
T Consensus 210 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~----~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 277 (374)
T 3uwc_A 210 --------RLYRNHGLINRDVCVEYGINCRMDTIQAVIANR----LMNQLETITEKRRGIAHLYDQSFVDLSEFIDVPVR 277 (374)
T ss_dssp --------HHHTBTTEEETTEESSCCCBCBCCHHHHHHHHH----HGGGHHHHHHHHHHHHHHHHHHTGGGTTTEECCCC
T ss_pred --------HHHHhcCccccCccccccccCCCCHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhccCCCeEEeccC
Confidence 111110 00111111211222211 1123455667777888888888888766 544334
Q ss_pred CCccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccC------------------C-----CCc
Q 047983 147 PEGSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVG------------------L-----KDW 203 (233)
Q Consensus 147 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~------------------~-----~~~ 203 (233)
+.++...| ..++... .+.+.+.+.|.++||.+.++.... . .+.
T Consensus 278 ~~~~~~~~---------~~~~~~~-----~~~~~l~~~L~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (374)
T 3uwc_A 278 REGVYHVF---------HIYVLRV-----KYRDQLFQYLKDNGIEVKIHYPIAMHLQPAAKSLGYQQGDFPMAEKHGEAV 343 (374)
T ss_dssp CTTEECCC---------SSEEEEE-----TTHHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGGCCCTTSCHHHHHHHHHE
T ss_pred CCCCceee---------EEEEEEc-----CCHHHHHHHHHHCCCccccCCCCccccChhhhhcCCccCCCccHHHHHhCE
Confidence 44444444 2222211 145556666778899999975110 0 267
Q ss_pred EEEEeec--CHHHHHHHHHHHHHHHHHH
Q 047983 204 LRITFAV--EPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 204 ~Rl~~~~--~~~~l~~~~~~l~~~l~~~ 229 (233)
+|+++.. ++++++++++.|++++++.
T Consensus 344 lrl~~~~~~t~edi~~~~~~l~~~l~~~ 371 (374)
T 3uwc_A 344 ITLPAHPYLTEEEINYIIKKVREFYLEK 371 (374)
T ss_dssp EEECCCTTSCHHHHHHHHHHHHHHHHTT
T ss_pred EEccCCCCCCHHHHHHHHHHHHHHHHhh
Confidence 9998885 8999999999999998754
No 190
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.38 E-value=1e-12 Score=116.86 Aligned_cols=183 Identities=10% Similarity=0.052 Sum_probs=103.6
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|.++|++||+++|+||+|.+|.+.|. ...+...+.. ..+.+.||||.+ ++| ||++ ++ .+. ..
T Consensus 282 ~~l~~l~~~~g~lli~DEv~~g~g~~g~-~~~~~~~gv~-~~~Di~t~sK~~-l~G---G~~~-~~--~~~---~~---- 345 (472)
T 1ohv_A 282 RKLRDISRKHGCAFLVDEVQTGGGSTGK-FWAHEHWGLD-DPADVMTFSKKM-MTG---GFFH-KE--EFR---PN---- 345 (472)
T ss_dssp HHHHHHHHHTTCEEEEECTTTTTTTTSS-SSGGGGGCCS-SCCSEEEECGGG-SSE---EEEE-CG--GGS---CS----
T ss_pred HHHHHHHHHhCCEEEEeCcccCCCCCCC-chhccccCCC-CCCCEEEEcccc-ccC---CccC-ch--hhc---cc----
Confidence 3789999999999999999998766553 1122222211 012245899985 456 8876 43 221 11
Q ss_pred hhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcC----CC-cccccCCCccEEEEE
Q 047983 81 SISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEI----PC-ITCPKKPEGSMFVMY 155 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~-~~~~~~~~~g~~~~~ 155 (233)
.......+++.++..++++++.+ +. ..+ ....+.++++++++.+.|+++ +. +.. ..+. |.+++
T Consensus 346 -----~~~~~~~T~~~~~~~~aaa~aal-~~-~~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~v~~-~~~~-g~~~~- 413 (472)
T 1ohv_A 346 -----APYRIFNTWLGDPSKNLLLAEVI-NI-IKR--EDLLSNAAHAGKVLLTGLLDLQARYPQFISR-VRGR-GTFCS- 413 (472)
T ss_dssp -----SSSSSCCSSSSCHHHHHHHHHHH-HH-HHH--TTHHHHHHHHHHHHHHHHHHHHHHCTTTCEE-EEEE-TTEEE-
T ss_pred -----ccccccCccCccHHHHHHHHHHH-HH-HHh--CCHHHHHHHHHHHHHHHHHHHHhhCCCcEEe-ecCC-ceEEE-
Confidence 11112223333333333344333 11 111 234566666666666666543 32 221 3455 44455
Q ss_pred ecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEee--cCHHHHHHHHHHHHHHHHHH
Q 047983 156 CGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFA--VEPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~--~~~~~l~~~~~~l~~~l~~~ 229 (233)
+.++... +...++.+++ ++||.+.|+. .+++|++++ .+++++++++++|.+++++.
T Consensus 414 --------~~~~~~~-----~~~~~~~~l~-~~Gv~~~~~g----~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~~ 471 (472)
T 1ohv_A 414 --------FDTPDES-----IRNKLISIAR-NKGVMLGGCG----DKSIRFRPTLVFRDHHAHLFLNIFSDILADF 471 (472)
T ss_dssp --------EECSSHH-----HHHHHHHHHH-HTTEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHHHHHTC
T ss_pred --------EEeCChh-----HHHHHHHHHH-HCCeEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 3332110 1334555555 6899999852 479999666 48999999999999988653
No 191
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.36 E-value=1.8e-11 Score=105.50 Aligned_cols=200 Identities=12% Similarity=0.082 Sum_probs=115.1
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHS 81 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~ 81 (233)
+|.++|++||+++|+|++++ . + .+..+..+ +..+++.|++|.++.+ ..+|++++++ .+++.+.-....+
T Consensus 159 ~i~~~~~~~~~~li~D~~~~-g---~-~~~~~~~~---~~d~~~~s~~K~l~~~-~g~g~~~~~~--~~~~~l~~~~~~~ 227 (379)
T 3ke3_A 159 ALSEAVHSVGGLLVIDCIAS-G---C-VWLDMKEL---GIDVLISAPQKGWSST-PCAGLVMLSA--AAIKKVESTESNC 227 (379)
T ss_dssp HHHHHHHHTTCEEEEECTTC-T---T-CCCCHHHH---TCSEEEECTTTTTCSC-CCEEEEEECH--HHHHHHHTCCCSC
T ss_pred HHHHHHHHcCCEEEEEeccc-C---C-cccccccc---CCCEEEecchhhcCCC-CceEEEEECH--HHHHhhhcCCCCc
Confidence 68999999999999999976 2 2 22222222 2337889999986543 3589999987 4443211000000
Q ss_pred hhh-HHhhh----hhhh----hccCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCC--c
Q 047983 82 ISL-NMRMD----DYLL----LSESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPE--G 149 (233)
Q Consensus 82 ~~~-~~~~~----~~~~----~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~--~ 149 (233)
... ..... .+.. +...++... .++.+.++.-.++-+++.+++++++++++.+.|+++ ++..+.++. +
T Consensus 228 ~~~~~~~~~~~~~~~~~g~~~~~~t~~~~~~~a~~aal~~~~~~g~~~~~~~~~~l~~~l~~~l~~~-g~~~~~~~~~~~ 306 (379)
T 3ke3_A 228 FSLDLKQWLTIMRAYENGGHAYHATMPTDSLRQFRDAILEAKEIGFDILRDAQWELGNRVRKVLTDK-GIESVAAEGFEA 306 (379)
T ss_dssp STTCHHHHHHHHHHHHTTSCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSBCTTCBC
T ss_pred eeecHHHHHHHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCEecCCccccC
Confidence 000 00000 0000 111223322 333333321112226788888999999999999887 444322221 2
Q ss_pred cEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC-----CCcEEEEeec--CHHHHHHHHHHH
Q 047983 150 SMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL-----KDWLRITFAV--EPSAFEIGLGRM 222 (233)
Q Consensus 150 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~-----~~~~Rl~~~~--~~~~l~~~~~~l 222 (233)
+.... +..+ +......+.|.++||.+.||..+.. .+++|+++.. ++++++++++.|
T Consensus 307 ~~i~~---------~~~~--------~~~~~~~~~L~~~Gi~v~~g~~~~~~~~~~~~~lRis~~~~~t~~di~~~~~~l 369 (379)
T 3ke3_A 307 PGVVV---------SYTE--------RDDMHKGSAFAEAGLQIAAGVPLKVGEPDNFKTFRLGLFGLDKLTDIDGTVERF 369 (379)
T ss_dssp SSEEE---------EECS--------CHHHHSSHHHHHTTCCCEECCCCSSCCCTTCCEEEEECCSHHHHTCHHHHHHHH
T ss_pred ceEEE---------EccC--------CcchHHHHHHHHCCeEEeCCccccccccCcCCEEEEeCCcCCCHHHHHHHHHHH
Confidence 22222 1121 1111124567788999999886542 5799999974 788999999999
Q ss_pred HHHHHHHh
Q 047983 223 KAFYYRHA 230 (233)
Q Consensus 223 ~~~l~~~~ 230 (233)
.+++++..
T Consensus 370 ~~~l~~~~ 377 (379)
T 3ke3_A 370 EKALDEVL 377 (379)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhc
Confidence 99998765
No 192
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.35 E-value=1.5e-11 Score=106.56 Aligned_cols=58 Identities=19% Similarity=0.179 Sum_probs=47.6
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceE-EEEEecC
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRL-GWLVTSD 66 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~-G~~~~~~ 66 (233)
++|+++|++||+++|+||+|..+.+.. ++. .+..+++.|+||.++++|.|+ ||+++++
T Consensus 164 ~~i~~~~~~~~~~livD~~~~~~~~~~----~~~----~~~di~~~S~sK~~~~~~~~~~G~v~~~~ 222 (389)
T 3acz_A 164 KGIAVVCHERGARLVVDATFTSPCFLK----PLE----LGADIALHSVSKYINGHGDVIGGVSSAKT 222 (389)
T ss_dssp HHHHHHHHHHTCEEEEECTTTCTTTCC----GGG----TTCSEEEEETTTTTTCSSCCCCEEEEESS
T ss_pred HHHHHHHHHcCCEEEEECCCccccccC----ccc----cCCeEEEECChhhccCCCCceeEEEEECc
Confidence 378999999999999999999865421 221 245589999999999999998 9999986
No 193
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.35 E-value=4.2e-12 Score=112.25 Aligned_cols=197 Identities=7% Similarity=-0.075 Sum_probs=115.2
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccC-CCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWI-VPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|.++|++||+++|+|++|+.. ..+..+..+ +..+++.|++|.++ .|+ ++|++.+++ .+++.+.-. .
T Consensus 234 ~~i~~la~~~g~~vi~D~a~~~g----~~~~~~~~~---~~D~~~~s~~K~l~~gp~-~~g~l~~~~--~~~~~~~~~-~ 302 (465)
T 3e9k_A 234 PAITKAGQAKGCYVGFDLAHAVG----NVELYLHDW---GVDFACWCSYKYLNAGAG-GIAGAFIHE--KHAHTIKPA-L 302 (465)
T ss_dssp HHHHHHHHHTTCEEEEECTTTTT----TSCCCHHHH---TCCEEEECSSSTTCCCTT-CCCEEEECG--GGTTTSCCS-S
T ss_pred HHHHHHHHHcCCEEEEEhhhhcC----CcCCchhhc---CCCEEEECcccccccCCC-ceEEEEEcH--HHHhhcCCc-c
Confidence 37899999999999999999852 222222222 33488899999974 444 899999877 444321100 0
Q ss_pred hhhhhH---Hhhh---------hhhhhcc-CcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcC-------
Q 047983 80 HSISLN---MRMD---------DYLLLSE-SVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEI------- 138 (233)
Q Consensus 80 ~~~~~~---~~~~---------~~~~~~~-~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~------- 138 (233)
..-... ..+. ....+.. +++... .++.+.++.-.+..++++++.+.++++++.+.|+++
T Consensus 303 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 382 (465)
T 3e9k_A 303 VGWFGHELSTRFKMDNKLQLIPGVCGFRISNPPILLVCSLHASLEIFKQATMKALRKKSVLLTGYLEYLIKHNYGKDKAA 382 (465)
T ss_dssp CCGGGBCHHHHTTCCSCCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCC-----
T ss_pred cCccCCCCCcccccCCCcCcCCChHHhccCCccHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhccccccc
Confidence 000000 0000 0000111 122222 333333221122237888999999999999999873
Q ss_pred ---CCcccccCCC----ccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEee--
Q 047983 139 ---PCITCPKKPE----GSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFA-- 209 (233)
Q Consensus 139 ---~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~-- 209 (233)
+++.. ..|. .|.++| +.++. +...+.+.|.++||.+. +...+++|++++
T Consensus 383 ~~~~g~~~-~~p~~~~~~g~~~~---------~~~~~--------~~~~l~~~L~~~Gi~v~----~~~~~~iRis~~~~ 440 (465)
T 3e9k_A 383 TKKPVVNI-ITPSHVEERGCQLT---------ITFSV--------PNKDVFQELEKRGVVCD----KRNPNGIRVAPVPL 440 (465)
T ss_dssp ----CEEE-CSCSSGGGBCSCEE---------EEECC--------TTCCHHHHHHTTTEECE----EETTTEEEEBCCTT
T ss_pred cCCCCeEE-eCCCCHhhcccEEE---------EEecC--------CHHHHHHHHHHCCEEEe----cCCCCEEEEeCccc
Confidence 56654 3443 356666 44431 22233444567799986 334689999983
Q ss_pred -cCHHHHHHHHHHHHHHHHHHh
Q 047983 210 -VEPSAFEIGLGRMKAFYYRHA 230 (233)
Q Consensus 210 -~~~~~l~~~~~~l~~~l~~~~ 230 (233)
.+.++++++++.|.+++++..
T Consensus 441 ~~t~edi~~~~~~l~~~l~~~~ 462 (465)
T 3e9k_A 441 YNSFHDVYKFTNLLTSILDSAE 462 (465)
T ss_dssp TCCHHHHHHHHHHHHHHHTC--
T ss_pred CCCHHHHHHHHHHHHHHHHhcc
Confidence 289999999999999887543
No 194
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.34 E-value=3.7e-12 Score=112.44 Aligned_cols=181 Identities=8% Similarity=0.009 Sum_probs=101.0
Q ss_pred ChHHHHHHHcCcEEEEccccCc-cccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGH-LVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~-~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|+++|++||+++|+||+|+. +.|.+. +.+....+. + +++.|+||.+ .++.++||+++++ .+++ .
T Consensus 165 ~~I~~l~~~~~~~livDea~~~~~~f~~~-~~~~~~~g~-D--i~~~S~~K~l-~~~~g~g~l~~~~--~~i~----~-- 231 (446)
T 2x3l_A 165 EEVIKSLHQLNIPVLIDEAHGAHFGLQGF-PDSTLNYQA-D--YVVQSFHKTL-PALTMGSVLYIHK--NAPY----R-- 231 (446)
T ss_dssp HHHHHHHHHTTCCEEEECTTCTTTTSTTS-CCCGGGGTC-S--EEEECHHHHS-SSCTTCEEEEEET--TCTT----H--
T ss_pred HHHHHHHHhcCCeEEEcchhhhhhccCCC-CCChHHcCC-C--EEEECCcccc-ccccccEEEEEcC--CcCC----H--
Confidence 3789999999999999999996 445543 333333333 2 8899999952 2334589999987 3332 1
Q ss_pred hhhhhHHhhhhhhh-h-ccCcchHH-HHHHHHhhhcHHHH-HHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEEEE
Q 047983 80 HSISLNMRMDDYLL-L-SESVYTTV-GAVPQILEKTEEEF-FSKITDILREAADICCDRLKEIPCITCPKKPEGSMFVMY 155 (233)
Q Consensus 80 ~~~~~~~~~~~~~~-~-~~~~~~~~-~~~~~~l~~~~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~ 155 (233)
..+..... + +.+++... +++...+. ....+ .++..+..++.++.+.+. ++.. ..+.++.++|
T Consensus 232 ------~~~~~~~~~~~~~s~~~~~~aal~~a~~-~l~~~g~~~~~~~~~~l~~~l~~~-----g~~~-~~~~~~~~l~- 297 (446)
T 2x3l_A 232 ------ENIIEYLSYFQTSSPSYLIMASLESAAQ-FYKTYDSTLFFAKRAQLIECLENK-----GFEM-LQVDDPLKLL- 297 (446)
T ss_dssp ------HHHHHHHHHHSCSSCCHHHHHHHHHHHH-HHHHCCCHHHHHHHHHHHHHHHHH-----TCEE-EECSSTTEEE-
T ss_pred ------HHHHHHHHHHcCCCchHHHHHHHHHHHH-HHHHhCHHHHHHHHHHHHHHHHHc-----CCEE-CcCCCCeEEE-
Confidence 22222111 1 12222222 22222111 01110 111334444444444444 3332 3344455688
Q ss_pred ecCCCcccccccccccCCCCChHHHHHHHHhccCEEEE-CCcccCCCCcEEEEeec--CHHHHHHHHHHHHHHHHHH
Q 047983 156 CGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVL-PGITVGLKDWLRITFAV--EPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~-pg~~f~~~~~~Rl~~~~--~~~~l~~~~~~l~~~l~~~ 229 (233)
+.++ +. +..+ +.+.|.++||.+. +|. +++|++++. +++++ ++++.|.++++++
T Consensus 298 --------i~~~-----~~-~~~~-l~~~L~~~GI~v~~~g~-----~~iRi~~~~~~t~e~i-~l~~aL~~~~~~~ 353 (446)
T 2x3l_A 298 --------IKYE-----GF-TGHD-IQNWFMNAHIYLELADD-----YQALAILPLWHHDDTY-LFDSLLRKIEDMI 353 (446)
T ss_dssp --------EECT-----TS-CHHH-HHHHHHHTTEEESEECS-----SCEEEECCCCCTTCCC-CHHHHHHHHHTCC
T ss_pred --------EEeC-----Cc-CHHH-HHHHHHHCCCEEEecCC-----CEEEEEeecCCCHHHH-HHHHHHHHHHHhh
Confidence 4443 12 2444 4455556699997 543 789999985 77778 8899988887654
No 195
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.34 E-value=2.1e-11 Score=109.01 Aligned_cols=208 Identities=13% Similarity=0.046 Sum_probs=119.1
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCcc-ccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHF-VPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|.++|++||+++++|++|+.+.+..+.. ..+..+.. .. +++.|.+|.++.| .++|+++++++ .+++. ....
T Consensus 265 ~~I~~la~~~g~~lhvD~a~~~~~~~~~~~~~~~~g~~~-~D-~i~~~~hK~~~~p-~~~g~l~~~~~-~~~~~--~~~~ 338 (504)
T 2okj_A 265 QEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIER-AN-SVTWNPHKMMGVL-LQCSAILVKEK-GILQG--CNQM 338 (504)
T ss_dssp HHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGG-CS-EEEECTTSTTCCC-SCCEEEEESST-THHHH--HHCC
T ss_pred HHHHHHHHHcCCEEEEehhhhhHHHhCHhhHhhcCCccc-CC-EEEECchhhcCCC-cceEEEEEECH-HHHHH--HhcC
Confidence 379999999999999999999887653322 22222211 12 5677899987766 79999999874 23211 0000
Q ss_pred hhhhh--HHh-h---hhhhhh----ccCcchHH--HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccc--
Q 047983 80 HSISL--NMR-M---DDYLLL----SESVYTTV--GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPK-- 145 (233)
Q Consensus 80 ~~~~~--~~~-~---~~~~~~----~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-- 145 (233)
....+ ... . ..+... +....+.. .++..+ ..+.+++..+...++++++.+.|++++++....
T Consensus 339 ~~~~l~~~~~~~~~~~~~~~~~~~~~rr~~~l~~~a~l~~l----g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~ 414 (504)
T 2okj_A 339 CAGYLFQPDKQYDVSYDTGDKAIQCGRHVDIFKFWLMWKAK----GTVGFENQINKCLELAEYLYAKIKNREEFEMVFNG 414 (504)
T ss_dssp CCSSSCCSCCSSCGGGCCGGGSSCSSCBCCHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHTTCTTEEESSSS
T ss_pred CCccccCCcccccCcCCcccCCCCCCCCccHHHHHHHHHHh----hHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecC
Confidence 00000 000 0 000000 00011111 222222 345677888889999999999999887776533
Q ss_pred CCCccEEEEEecCCCcccccccccccCCCC----------ChHHHHHHHHhccCEEEECCcccCC-CCcEEEEee---cC
Q 047983 146 KPEGSMFVMYCGSEDKCLLKLNYSLLEGIN----------SDTEFALKLAKEESIIVLPGITVGL-KDWLRITFA---VE 211 (233)
Q Consensus 146 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~ll~~~gi~v~pg~~f~~-~~~~Rl~~~---~~ 211 (233)
.|..+++++ ...+... .+.. .....+.+.|.++|+++..+..+.. .+++|++++ .+
T Consensus 415 ~p~~~~v~f---------~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~~~~~~~~lRis~~~~~~t 484 (504)
T 2okj_A 415 EPEHTNVCF---------WYIPQSL-RGVPDSPQRREKLHKVAPKIKALMMESGTTMVGYQPQGDKANFFRMVISNPAAT 484 (504)
T ss_dssp CCSSSCEEE---------EECCGGG-SSCCCCHHHHHHHTTHHHHHHHHHHHHTSCEEEEEEETTEEEEEEECCCCTTCC
T ss_pred CCCeEEEEE---------EEeCccc-cccccchhhHHHHHHHHHHHHHHHHhCCcEEEEeeEECCceEEEEEEeCCCCCC
Confidence 477787776 2112100 0000 0123344455566865444334443 368999997 38
Q ss_pred HHHHHHHHHHHHHHHHH
Q 047983 212 PSAFEIGLGRMKAFYYR 228 (233)
Q Consensus 212 ~~~l~~~~~~l~~~l~~ 228 (233)
+++++.+++.|++++++
T Consensus 485 ~edi~~~~~~l~~~~~~ 501 (504)
T 2okj_A 485 QSDIDFLIEEIERLGQD 501 (504)
T ss_dssp HHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999887754
No 196
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.33 E-value=8.6e-12 Score=108.64 Aligned_cols=58 Identities=16% Similarity=0.190 Sum_probs=46.3
Q ss_pred ChHHHHHHHcC-cEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCC-ceEEEEEecC
Q 047983 1 FCIEETTKKLG-IMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPG-WRLGWLVTSD 66 (233)
Q Consensus 1 ~~i~~l~~~~~-~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~R~G~~~~~~ 66 (233)
++|+++|+++| +++|+||+|..+.+.. ++. .+..+++.|+||.++++| .|+||+++++
T Consensus 171 ~~i~~la~~~g~~~livD~~~~~~~~~~----~~~----~~~div~~S~sK~~~g~~~~~~G~v~~~~ 230 (403)
T 3cog_A 171 EGCAHIVHKHGDIILVVDNTFMSPYFQR----PLA----LGADISMYSATKYMNGHSDVVMGLVSVNC 230 (403)
T ss_dssp HHHHHHHTSSSCCEEEEECTTTCTTTCC----TTT----TTCSEEEEETTTTTTCSSCCCCEEEEECC
T ss_pred HHHHHHHHHcCCCEEEEECCCcccccCC----ccc----cCCeEEEEcChhhccCCCCCeEEEEEECc
Confidence 37899999999 9999999999876431 221 245699999999988876 5899999964
No 197
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.32 E-value=5.6e-11 Score=104.72 Aligned_cols=207 Identities=14% Similarity=-0.004 Sum_probs=117.5
Q ss_pred ChHHHHHHHc------CcEEEEccccCcccc---CCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccc
Q 047983 1 FCIEETTKKL------GIMVIADEVYGHLVF---GNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGIL 71 (233)
Q Consensus 1 ~~i~~l~~~~------~~~lI~De~y~~~~~---~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~ 71 (233)
++|.++|+++ |+++++|++|..+.. .+..... +....-.++..|.+| |+++|+++||+++++...+.
T Consensus 207 ~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~---~~~~~~d~~~~~~hK-~~~~~~~~G~~~~~~~~~~~ 282 (452)
T 2dgk_A 207 QPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWD---FRLPRVKSISASGHK-FGLAPLGCGWVIWRDEEALP 282 (452)
T ss_dssp HHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCS---TTSTTEEEEEEETTT-TTCCCSSCEEEEESSGGGSC
T ss_pred HHHHHHHHHHhhccCCCCcEEEEcccHHHHHHhhCccchhh---cCCCCCcEEEECccc-ccCCCCCeEEEEEcCHHHHH
Confidence 4789999996 999999999998753 2221111 111122356678899 58899999999997631111
Q ss_pred cccchhhhhhhhhHHhhh-hhhh--hccCcch-HHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccC-
Q 047983 72 QDLGVAFFHSISLNMRMD-DYLL--LSESVYT-TVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKK- 146 (233)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~- 146 (233)
+.+... . ..+. .+.. ...+.+. ...++...+..-..+.+++..+.+.++++++.+.|++++++....+
T Consensus 283 ~~~~~~--~-----~~~~~~~~~~~~~~~r~~~~~~~~~aal~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~ 355 (452)
T 2dgk_A 283 QELVFN--V-----DYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFICTG 355 (452)
T ss_dssp GGGCEE--E-----CCTTCCEEECCSCCSCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSEEEEEEC
T ss_pred HHhccC--c-----cccCCCCCCcccCCCChhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEecCC
Confidence 211000 0 0000 0000 1111111 2222211122223456788889999999999999999876664322
Q ss_pred ---CCccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCc---ccCCCCcEEEEeec--CHHHHHHH
Q 047983 147 ---PEGSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGI---TVGLKDWLRITFAV--EPSAFEIG 218 (233)
Q Consensus 147 ---~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~---~f~~~~~~Rl~~~~--~~~~l~~~ 218 (233)
+..+++++ +++....... +...+.+.|.++||.+.... ......++|+++.. ++++++..
T Consensus 356 ~~~~~~~~v~f----------~~~~~~~~~~--~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRis~~~~~t~e~id~l 423 (452)
T 2dgk_A 356 RPDEGIPAVCF----------KLKDGEDPGY--TLYDLSERLRLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELL 423 (452)
T ss_dssp CTTTBSSEEEE----------EECTTCCCSC--CHHHHHHHHHHTTCBCCEEECSTTCTTCEEEEEECCTTCCHHHHHHH
T ss_pred CCCCCeEEEEE----------EecCcccccC--CHHHHHHHHHhcCCeeeeeeCCcccCCeEEEEEEecCCCCHHHHHHH
Confidence 33444443 2321100001 33445555667798654211 11124589999996 68899999
Q ss_pred HHHHHHHHHHHh
Q 047983 219 LGRMKAFYYRHA 230 (233)
Q Consensus 219 ~~~l~~~l~~~~ 230 (233)
++.|++++++..
T Consensus 424 i~~l~~~~~~~~ 435 (452)
T 2dgk_A 424 LEDYKASLKYLS 435 (452)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999998887664
No 198
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.31 E-value=4.3e-11 Score=104.28 Aligned_cols=59 Identities=19% Similarity=0.182 Sum_probs=47.0
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecC
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD 66 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~ 66 (233)
++|+++|++||+++|+||+|..+.+.. .+. ..+..+++.|+||.++.||.|+||+++.+
T Consensus 160 ~~i~~l~~~~~~~li~D~~~~~~~~~~---~~~----~~~~di~~~S~~K~~~~~~~~~G~~~~~~ 218 (412)
T 2cb1_A 160 EALATLAEEAGVALVVDNTFGAAGALC---RPL----AWGAHVVVESLTKWASGHGSVLGGAVLSR 218 (412)
T ss_dssp HHHHHHHHHHTCEEEEECGGGTTTTSC---CGG----GGTCSEEEEETTTTTTCSSCCCCEEEEEC
T ss_pred HHHHHHHHHcCCEEEEECCCccccccC---Ccc----ccCCeEEEECCcccccCCCCcEEEEEEec
Confidence 378999999999999999999862111 111 12456999999999999999999998876
No 199
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.31 E-value=2.3e-11 Score=107.36 Aligned_cols=183 Identities=12% Similarity=0.031 Sum_probs=106.9
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCC-ceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|+++|++||+++|+|++|...... .++ .+ ...+++.|+||.++..| .|+||+++++ +++
T Consensus 220 ~~I~~la~~~g~~livD~a~~~~~~~----~~~-~~---g~Div~~S~sK~~gg~gd~~~G~l~~~~--~l~-------- 281 (445)
T 1qgn_A 220 ELVSKLCHEKGALVCIDGTFATPLNQ----KAL-AL---GADLVLHSATKFLGGHNDVLAGCISGPL--KLV-------- 281 (445)
T ss_dssp HHHHHHHHHTTCEEEEECTTTCTTTC----CTT-TT---TCSEEEECTTTTTTCSSSCCCEEEEECH--HHH--------
T ss_pred HHHHHHHHHcCCEEEEECCCcccccC----Ccc-cc---CCEEEEECCcccccccccceEEEEEECH--HHH--------
Confidence 37899999999999999999864321 111 12 33488999999988766 5899999987 343
Q ss_pred hhhhhHHhhhhhh-hhccCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCC----------
Q 047983 80 HSISLNMRMDDYL-LLSESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKP---------- 147 (233)
Q Consensus 80 ~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~---------- 147 (233)
..+.... .++...++.. .....-+ +.+....+...++++.+.+.|++.+.+.....|
T Consensus 282 ------~~l~~~~~~~g~~~~~~~a~~~~~~l-----~~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~ 350 (445)
T 1qgn_A 282 ------SEIRNLHHILGGALNPNAAYLIIRGM-----KTLHLRVQQQNSTALRMAEILEAHPKVRHVYYPGLQSHPEHHI 350 (445)
T ss_dssp ------HHHHHHHHHHCCCCCHHHHHHHHHHG-----GGHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSSSSTTHHH
T ss_pred ------HHHHHHHHHhCCCCCHHHHHHHHHhH-----HHHHHHHHHHHHHHHHHHHHHhcCCCceEEECCCCCCCchHHH
Confidence 2222221 1222223322 1111111 223444566677788888999887654211122
Q ss_pred ------CccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccC----------------------
Q 047983 148 ------EGSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVG---------------------- 199 (233)
Q Consensus 148 ------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~---------------------- 199 (233)
..|..++ +.++-. .++...+...|+..++.+..|+.+.
T Consensus 351 ~~~~~~g~g~ivs---------f~l~~~-----~~~~~~~l~~l~~~~i~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~g 416 (445)
T 1qgn_A 351 AKKQMTGFGGAVS---------FEVDGD-----LLTTAKFVDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSDRAKYG 416 (445)
T ss_dssp HHHHCSCCCSEEE---------EEESSC-----HHHHHHHHHHCSSSEECSCCCSSSCEEECHHHHHSTTSCHHHHHTTT
T ss_pred HHHhccCCCcEEE---------EEECCC-----HHHHHHHHHhCCCceEeccCCCCceeeecccccccccCCHHHHHhcC
Confidence 1244455 334310 0123344444544577777776431
Q ss_pred C-CCcEEEEeecCHHHHHHHHHHHHHHHHH
Q 047983 200 L-KDWLRITFAVEPSAFEIGLGRMKAFYYR 228 (233)
Q Consensus 200 ~-~~~~Rl~~~~~~~~l~~~~~~l~~~l~~ 228 (233)
. ++.+|+|++. |+++.+++.|.++++.
T Consensus 417 ~~~~~iRlSvG~--Edid~li~~L~~al~~ 444 (445)
T 1qgn_A 417 IMDNLVRFSFGV--EDFDDLKADILQALDS 444 (445)
T ss_dssp CCSSEEEEECCS--SCHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEecc--CCHHHHHHHHHHHHhh
Confidence 1 4789999994 3467777777777653
No 200
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.31 E-value=3e-11 Score=106.01 Aligned_cols=194 Identities=16% Similarity=0.140 Sum_probs=110.2
Q ss_pred ChHHHHHHHcCcEEEEc---cccCccccCCCccccccccCCccCEEEEccCcccc----CCCCceEEEEEecCCCccccc
Q 047983 1 FCIEETTKKLGIMVIAD---EVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRW----IVPGWRLGWLVTSDPNGILQD 73 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~D---e~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~----~~~G~R~G~~~~~~~~~~~~~ 73 (233)
++|+++|+++|+++|+| .+|+.+. .+ ..++. . +++.| +|.| ++.|.|+||+++++ .+++.
T Consensus 215 ~~i~~la~~~g~~vivd~d~~a~g~~~------~~-~~~g~--D-~~~~s-~kk~~~~~~~~Gp~~G~l~~~~--~~~~~ 281 (438)
T 1wyu_A 215 GPFAEAAHGAGALFVAVADPLSLGVLK------PP-GAYGA--D-IAVGD-GQSLGLPMGFGGPHFGFLATKK--AFVRQ 281 (438)
T ss_dssp HHHHHHHHHTTCEEEEECCTTGGGTBC------CH-HHHTC--S-EEEEE-CTTTTCCCGGGCSCCEEEEECG--GGGGG
T ss_pred HHHHHHHHHcCCEEEEEechhhccCcC------CC-ccCCC--C-EEEEC-CcccCCCccCCCCCeeEEEEcH--HHHHh
Confidence 37899999999999955 2243321 11 11222 2 44545 5654 35577999999987 45443
Q ss_pred cchhhhhh--h--hh--------H---Hhhh-hhhhhccCcchHHHHHHH--HhhhcHHHHHHHHHHHHHHHHHHHHHHh
Q 047983 74 LGVAFFHS--I--SL--------N---MRMD-DYLLLSESVYTTVGAVPQ--ILEKTEEEFFSKITDILREAADICCDRL 135 (233)
Q Consensus 74 ~~~~~~~~--~--~~--------~---~~~~-~~~~~~~~~~~~~~~~~~--~l~~~~~~~~~~~~~~~~~~~~~l~~~L 135 (233)
+... .+. . .. . ...+ ...+.+.....+..++.+ ++.....+.++++.+.+.++++++.+.|
T Consensus 282 l~~~-~~g~~~~~~~~~~~~~~l~~~~~~~r~~~~t~~~~~~~~~~a~~aa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L 360 (438)
T 1wyu_A 282 LPGR-LVSETVDVEGRRGFILTLQAREQYIRRAKAKSNITTNAQLTALMGAMYLAALGPEGLREVALKSVEMAHKLHALL 360 (438)
T ss_dssp CCSC-CEEEEEBTTSCEEEEECCGGGSHHHHGGGSSCCCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCc-eeccccccCCCcceeeeccccccccchhcccCCccchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHH
Confidence 2100 000 0 00 0 0000 001111111222222222 1322334457888999999999999999
Q ss_pred hcCCCcccccCCCccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEE--ECCcccCCCCcEEEEeec--C
Q 047983 136 KEIPCITCPKKPEGSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIV--LPGITVGLKDWLRITFAV--E 211 (233)
Q Consensus 136 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v--~pg~~f~~~~~~Rl~~~~--~ 211 (233)
++++++.. ..+. .+|.+ +.+..+ . +..++..+++ ++||.+ .++..|+ .+++|+|+.. +
T Consensus 361 ~~~~g~~~-~~~~-~~~~~---------~~~~~~----~-~~~~~~~~L~-~~gi~v~~~~~~~~~-~~~lRis~~~~~t 422 (438)
T 1wyu_A 361 LEVPGVRP-FTPK-PFFNE---------FALALP----K-DPEAVRRALA-ERGFHGATPVPREYG-ENLALFAATELHE 422 (438)
T ss_dssp TTSTTCEE-CSCS-SBCSE---------EEEECS----S-CHHHHHHHHH-HTTCCCCEECCTTSC-SSEEEEECCTTCC
T ss_pred hcCCCeEE-CCCC-CeEEE---------EEEeCC----C-CHHHHHHHHH-HCCceeccccccccC-CCeEEEEecccCC
Confidence 99877764 3332 44443 223221 1 2455555554 669999 7776664 6899999994 8
Q ss_pred HHHHHHHHHHHHHHH
Q 047983 212 PSAFEIGLGRMKAFY 226 (233)
Q Consensus 212 ~~~l~~~~~~l~~~l 226 (233)
.++++++++.|++++
T Consensus 423 ~edi~~~~~~l~~~l 437 (438)
T 1wyu_A 423 EEDLLALREALKEVL 437 (438)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHh
Confidence 889999999988764
No 201
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.30 E-value=3.1e-11 Score=104.71 Aligned_cols=182 Identities=15% Similarity=0.034 Sum_probs=105.8
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCC-ceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|+++|++||+++|+||+|....... ++ .+ ...+++.|+||.++.+| .|.||+++++. .+.
T Consensus 171 ~~i~~la~~~g~~li~D~~~~~~~~~~----~~-~~---~~di~~~S~sK~lg~~g~~~~G~v~~~~~-~~~-------- 233 (392)
T 3qhx_A 171 AGIAQLGADSSAKVLVDNTFASPALQQ----PL-SL---GADVVLHSTTKYIGGHSDVVGGALVTNDE-ELD-------- 233 (392)
T ss_dssp HHHHHHHHHHTCEEEEECTTTCTTTCC----GG-GG---TCSEEEEETTTTTTCSSCCCCEEEEESCH-HHH--------
T ss_pred HHHHHHHHHcCCEEEEECCCcccccCC----hH-Hh---CCcEEEEcCccccCCCCCceEEEEEECcH-HHH--------
Confidence 378999999999999999998643221 11 12 33488999999999887 89999999852 232
Q ss_pred hhhhhHHhhhhhhh-hccCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCC------C---
Q 047983 80 HSISLNMRMDDYLL-LSESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKP------E--- 148 (233)
Q Consensus 80 ~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~------~--- 148 (233)
..+..... .+...++.. .+....++ .+....+...++++.+.+.|++.+.+.....| .
T Consensus 234 ------~~l~~~~~~~g~~~~~~~~~~~~~~l~-----~l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~ 302 (392)
T 3qhx_A 234 ------QSFAFLQNGAGAVPGPFDAYLTMRGLK-----TLVLRMQRHSENAAAVAEFLAEHPAISTVLYPGLPSHPGHAV 302 (392)
T ss_dssp ------HHHHHHHHHHCCCCCHHHHHHHHHHHT-----THHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHH
T ss_pred ------HHHHHHHHhcCCCCCHHHHHHHHhhhh-----HHHHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCCCHHH
Confidence 22222211 222333332 22222221 13344566677888888888776543211111 1
Q ss_pred -------ccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccC--------------------CC
Q 047983 149 -------GSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVG--------------------LK 201 (233)
Q Consensus 149 -------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~--------------------~~ 201 (233)
.|..++ +.++-.. ...+.+...|+..|+.+..|+.++ .+
T Consensus 303 ~~~~~~g~g~~~~---------~~l~~~~-----~~~~~~~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~g~~~ 368 (392)
T 3qhx_A 303 AARQMRGFGGMVS---------VRMRAGR-----TAAEQLCAKTNIFILAESLGSVESLIEHPSAMTHASTAGSQLEVPD 368 (392)
T ss_dssp HHHHCSSCCSEEE---------EEETTCH-----HHHHHHHHHCSSSEECSCCCCSSCEEECGGGTSCGGGBTTBCCCCT
T ss_pred HHHhCCCCceEEE---------EEeCCcH-----HHHHHHHHhCCCceECCCCCCCCceeeCcccccccccCHHHcCCCC
Confidence 144455 4443210 134555566667788887777642 14
Q ss_pred CcEEEEeecCHHHHHHHHHHHHHHH
Q 047983 202 DWLRITFAVEPSAFEIGLGRMKAFY 226 (233)
Q Consensus 202 ~~~Rl~~~~~~~~l~~~~~~l~~~l 226 (233)
+.+|+|++.+ +.++.++.|.+.+
T Consensus 369 ~~iRlSvg~e--~~~~~i~~l~~al 391 (392)
T 3qhx_A 369 DLVRLSVGIE--DVADLLDDLKQAL 391 (392)
T ss_dssp TEEEEECCSS--CHHHHHHHHHHHH
T ss_pred CeEEEEeccC--CHHHHHHHHHHHh
Confidence 6799999863 3345555555543
No 202
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.29 E-value=3e-11 Score=104.83 Aligned_cols=112 Identities=12% Similarity=-0.022 Sum_probs=70.6
Q ss_pred ChHHHHHHHc----CcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceE-EEEEecCCCccccccc
Q 047983 1 FCIEETTKKL----GIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRL-GWLVTSDPNGILQDLG 75 (233)
Q Consensus 1 ~~i~~l~~~~----~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~-G~~~~~~~~~~~~~~~ 75 (233)
++|+++|+++ |+++|+||+|..+.+. . ...+ +..+++.|+||.++.+|+|+ ||++++++ .++
T Consensus 158 ~~i~~la~~~~~~~~~~livD~a~~~~~~~--~---~~~~---~~di~~~S~sK~~g~~G~rigG~~~~~~~-~~~---- 224 (393)
T 1n8p_A 158 QKVADLIKKHAAGQDVILVVDNTFLSPYIS--N---PLNF---GADIVVHSATKYINGHSDVVLGVLATNNK-PLY---- 224 (393)
T ss_dssp HHHHHHHHHHTTTTTCEEEEECTTTHHHHC--C---GGGG---TCSEEEEETTTTTTCSSCCCCEEEEESCH-HHH----
T ss_pred HHHHHHHHHhCCCCCCEEEEeCCccccccC--C---HHHc---CCeEEEEECcccccCCCCceeEEEEeCCH-HHH----
Confidence 3789999999 9999999999987653 1 1112 35599999999999999999 99998532 333
Q ss_pred hhhhhhhhhHHhhhhhhh-hccCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 047983 76 VAFFHSISLNMRMDDYLL-LSESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPC 140 (233)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 140 (233)
..+..... .+...++.. .+....+ +.+....+...++++.+.+.|++.+.
T Consensus 225 ----------~~l~~~~~~~g~~~~~~~~~~~~~~l-----~~~~~~~~~~~~~~~~l~~~L~~~~~ 276 (393)
T 1n8p_A 225 ----------ERLQFLQNAIGAIPSPFDAWLTHRGL-----KTLHLRVRQAALSANKIAEFLAADKE 276 (393)
T ss_dssp ----------HHHHHHHHHHCCCCCHHHHHHHHHHH-----TTHHHHHHHHHHHHHHHHHHHTSCTT
T ss_pred ----------HHHHHHHHhcCCCCCHHHHHHHHhcc-----chHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 22222111 222222222 2111111 12344556667777788888876543
No 203
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.27 E-value=1.7e-11 Score=104.99 Aligned_cols=191 Identities=15% Similarity=0.154 Sum_probs=107.9
Q ss_pred ChHHHHHHHcCcEEEEccccCccc-cCCCccccccccCCccCEEEEccCc--cccCCCCceEEEEEecCCCccccccchh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLV-FGNTHFVPMGVFGSIVPVLTLGSIS--KRWIVPGWRLGWLVTSDPNGILQDLGVA 77 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~-~~~~~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~R~G~~~~~~~~~~~~~~~~~ 77 (233)
++|.++|++||+++|+||+|+... +++.. +... . + +.+.||| |.++.+| +.|++++++. .+.+. +
T Consensus 141 ~~i~~l~~~~~~~li~D~a~~~g~~~~~~~---~~~~-~-d--~~~~S~~~~K~l~~~g-~gg~~~~~~~-~~~~~---~ 208 (373)
T 3frk_A 141 DEIKRIAKKYNLKLIEDAAQAHGSLYKGMK---VGSL-G-D--AAGFSFYPAKNLGSLG-DGGAVVTNDK-DLAEK---I 208 (373)
T ss_dssp HHHHHHHHHHTCEEEEECTTCTTCEETTEE---TTSS-S-S--EEEEECCTTSSSCCSS-SCEEEEESCH-HHHHH---H
T ss_pred HHHHHHHHHcCCEEEEECCcccCCEECCEe---cccc-c-c--EEEEeCcCCCccCccc-eeEEEEeCCH-HHHHH---H
Confidence 378999999999999999998633 33221 1111 1 2 7778877 8765434 4789888762 23221 1
Q ss_pred hhhhhhhHHhhhhhh----------hhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCC
Q 047983 78 FFHSISLNMRMDDYL----------LLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKP 147 (233)
Q Consensus 78 ~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 147 (233)
..+.... ..+.......+++... ..+.+++..+..+++.+++.+.|++++ +..+..+
T Consensus 209 --------~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~ 275 (373)
T 3frk_A 209 --------KALSNYGSEKKYHHIYKGFNSRLDELQAGFLRV----KLKYLDKWNEERRKIAQKYIAGINNPN-VIIPVEA 275 (373)
T ss_dssp --------HHHHBTTCSBTTBCCSCCCBCCCCHHHHHHHHH----HHHTHHHHHHHHHHHHHHHHHHCCCTT-EECCCCC
T ss_pred --------HHHHhcCcccCCccccccccCCCCHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhccCc-eEeccCC
Confidence 1111100 0111112221222221 123345566777778888888888875 4432233
Q ss_pred CccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCC-----------------------CCcE
Q 047983 148 EGSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGL-----------------------KDWL 204 (233)
Q Consensus 148 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~-----------------------~~~~ 204 (233)
.++...| ..++... .+.+.+.+.|.++||.+.++...+. ...+
T Consensus 276 ~~~~~~~---------~~~~~~~-----~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 341 (373)
T 3frk_A 276 DYAKHVW---------YTFVIRS-----EKRDELQKYLNNNGIGTLIHYPIPIHLQQAYKDLGFKTGNFPIAEKIANEIL 341 (373)
T ss_dssp TTEECCC---------SSEEEEE-----SSHHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGGCCCTTSSHHHHHHHHHEE
T ss_pred CCCceee---------EEEEEEe-----CCHHHHHHHHHHCCCCcccCcCCccccChHHHhcCCCCCCCHHHHHHHhCEE
Confidence 3333333 2222211 1455666777788999987652110 1569
Q ss_pred EEEeec--CHHHHHHHHHHHHHHHHHHh
Q 047983 205 RITFAV--EPSAFEIGLGRMKAFYYRHA 230 (233)
Q Consensus 205 Rl~~~~--~~~~l~~~~~~l~~~l~~~~ 230 (233)
|+++.. ++++++..++.|+++..++.
T Consensus 342 rl~~~~~~t~~di~~~~~~l~~~~~~~~ 369 (373)
T 3frk_A 342 SIPIWYGMKNEEIEYVIDKINAWKLEHH 369 (373)
T ss_dssp EECCCTTCCHHHHHHHHHHHHTCC----
T ss_pred EccCCCCCCHHHHHHHHHHHHHHhhhhc
Confidence 999986 89999999999988877664
No 204
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.25 E-value=3.1e-11 Score=104.05 Aligned_cols=189 Identities=12% Similarity=0.032 Sum_probs=105.9
Q ss_pred ChHHHHHHHcCcEEEEccccCccc-cCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLV-FGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~-~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|+++|++||+++|+||+|+... +.+.. ...+. + +.+.||||..+++|.+.||+++++. .+.+. +
T Consensus 161 ~~i~~l~~~~~~~li~D~a~~~g~~~~~~~---~~~~~--d--i~~~S~s~~K~l~~g~gg~~~~~~~-~~~~~---~-- 227 (391)
T 3dr4_A 161 DPILEVARRHNLLVIEDAAEAVGATYRGKK---SGSLG--D--CATFSFFGNAIITTGEGGMITTNDD-DLAAK---M-- 227 (391)
T ss_dssp HHHHHHHHHTTCEEEEECTTCTTCEETTEE---TTSSS--S--EEEEECBTTSSSCCBSCEEEEESCH-HHHHH---H--
T ss_pred HHHHHHHHHcCCEEEEECcccccceECCee---ecccC--C--EEEEECCCCCcCCcCCeEEEEECCH-HHHHH---H--
Confidence 378999999999999999999633 33221 11111 2 6677877333445567899998862 23211 1
Q ss_pred hhhhhHHhhhhhh------------hhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccC-
Q 047983 80 HSISLNMRMDDYL------------LLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKK- 146 (233)
Q Consensus 80 ~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~- 146 (233)
..+.... ..+.......+++... ..+.+++..+..+++.+++.+.|+++ ++..+..
T Consensus 228 ------~~~~~~g~~~~~~~~~~~~g~~~~~~~l~aa~~~~----~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~ 296 (391)
T 3dr4_A 228 ------RLLRGQGMDPNRRYWFPIVGFNYRMTNIQAAIGLA----QLERVDEHLAARERVVGWYEQKLARL-GNRVTKPH 296 (391)
T ss_dssp ------HHHHBTTCCTTSTTCCSSCCCBCBCCHHHHHHHHH----HHHTHHHHHHHHHHHHHHHHHHHGGG-TTSEECCC
T ss_pred ------HHHHhcCCCCCCcccccccccccCCCHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhhcC-CccccCcC
Confidence 1111100 0011112221222211 12344556677777888888888876 5443222
Q ss_pred -CC---cc-EEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcc-------c--------C-----CC
Q 047983 147 -PE---GS-MFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGIT-------V--------G-----LK 201 (233)
Q Consensus 147 -~~---~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~-------f--------~-----~~ 201 (233)
+. .+ +.++ +.++.. .+. +.+.+.+.|.++||.+.+|.. | + ..
T Consensus 297 ~~~~~~~~~~~~~---------i~~~~~--~~~--~~~~l~~~L~~~GI~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 363 (391)
T 3dr4_A 297 VALTGRHVFWMYT---------VRLGEG--LST--TRDQVIKDLDALGIESRPVFHPMHIMPPYAHLATDDLKIAEACGV 363 (391)
T ss_dssp CCTTSCCCCSSEE---------EEECSS--CSS--CHHHHHHHHHHTTCCCEECCCCGGGSGGGGGGCCTTCHHHHHHHH
T ss_pred CCCCCcceeEEEE---------EEECCc--cch--hHHHHHHHHHHCCCceeecCCccccChhhhhcCcCCChHHHHHHh
Confidence 11 22 2234 333321 012 455566667778999998741 0 0 03
Q ss_pred CcEEEEeec--CHHHHHHHHHHHHHHH
Q 047983 202 DWLRITFAV--EPSAFEIGLGRMKAFY 226 (233)
Q Consensus 202 ~~~Rl~~~~--~~~~l~~~~~~l~~~l 226 (233)
..+|+++.. ++++++.+++.|++++
T Consensus 364 ~~lrl~~~~~~t~edi~~~~~~l~~~l 390 (391)
T 3dr4_A 364 DGLNLPTHAGLTEADIDRVIAALDQVL 390 (391)
T ss_dssp HEEEECCCTTCCHHHHHHHHHHHHTTC
T ss_pred CeEEccCCCCCCHHHHHHHHHHHHHHh
Confidence 568998885 8899999999887653
No 205
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.22 E-value=3.2e-10 Score=101.44 Aligned_cols=209 Identities=13% Similarity=-0.010 Sum_probs=119.3
Q ss_pred ChHHHHHHHc------CcEEEEccccCcccc---CCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccc
Q 047983 1 FCIEETTKKL------GIMVIADEVYGHLVF---GNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGIL 71 (233)
Q Consensus 1 ~~i~~l~~~~------~~~lI~De~y~~~~~---~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~ 71 (233)
++|.++|+++ |+++++|++|..+.. .+.....+ ....-.++..|.+|. +.++.++||+++.+. ..+
T Consensus 222 ~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~~~~---~~~~~D~v~~s~hK~-l~~p~g~G~~~~~~~-~~l 296 (502)
T 3hbx_A 222 KLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDF---RLPLVKSINVSGHKY-GLVYAGIGWVIWRNK-EDL 296 (502)
T ss_dssp HHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCST---TSTTEEEEEEETTTT-TCCCSSCEEEEESSG-GGS
T ss_pred HHHHHHHHHhhhccCCCCeEEEECCccchhhhhhCccccccc---CCCCceEEEECcccc-cCCCCCeEEEEEeCH-HHh
Confidence 4789999999 999999999997652 22211111 111223566788886 777889999998764 222
Q ss_pred cccchhhhhhhhhHHhhhhhhhhccCcch-HHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccC-CCc
Q 047983 72 QDLGVAFFHSISLNMRMDDYLLLSESVYT-TVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKK-PEG 149 (233)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~~~ 149 (233)
.+ .+. ....-+...... ..+..+.+. ...++...+..-..+.+.+..+...++++++.+.|++++++..+.. |..
T Consensus 297 ~~-~~~-~~~~yl~~~~~~-~~~~~sr~~~~~~a~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~ 373 (502)
T 3hbx_A 297 PE-ELI-FHINYLGADQPT-FTLNFSKGSSQVIAQYYQLIRLGHEGYRNVMENCRENMIVLREGLEKTERFNIVSKDEGV 373 (502)
T ss_dssp CG-GGC-EEECSSSSCEEE-CCSCCSCBSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEECSCSSSS
T ss_pred hH-Hhc-cCcccccCCCCC-ccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCCCc
Confidence 11 000 000000000000 001111111 2222222222223445677888888899999999999876765333 344
Q ss_pred cEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccC---CCCcEEEEeec--CHHHHHHHHHHHHH
Q 047983 150 SMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVG---LKDWLRITFAV--EPSAFEIGLGRMKA 224 (233)
Q Consensus 150 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~---~~~~~Rl~~~~--~~~~l~~~~~~l~~ 224 (233)
+ ++. ++++... .. +...+.+.|.++||.+....... ...++|+++.. +.++++..++.|.+
T Consensus 374 ~-~v~---------f~~~~~~--~~--~~~~l~~~L~~~Gi~v~~~~~p~~~~~~~~lRisv~~~~t~edid~li~~L~~ 439 (502)
T 3hbx_A 374 P-LVA---------FSLKDSS--CH--TEFEISDMLRRYGWIVPAYTMPPNAQHITVLRVVIREDFSRTLAERLVIDIEK 439 (502)
T ss_dssp S-EEE---------EEESSCS--SC--CHHHHHHHHHTTTCBCCEEECCTTCTTCEEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred e-EEE---------EEecCCC--cC--CHHHHHHHHHhCCcEEeeccCCcccCCceEEEEEeCCCCCHHHHHHHHHHHHH
Confidence 4 444 3333211 11 44455666778899874322211 13689999985 78899999999999
Q ss_pred HHHHHhh
Q 047983 225 FYYRHAK 231 (233)
Q Consensus 225 ~l~~~~~ 231 (233)
++++..+
T Consensus 440 ~l~~l~~ 446 (502)
T 3hbx_A 440 VMRELDE 446 (502)
T ss_dssp HHHHHHT
T ss_pred HHHHHHh
Confidence 8887653
No 206
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.22 E-value=1.7e-10 Score=101.42 Aligned_cols=191 Identities=12% Similarity=0.040 Sum_probs=106.7
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEec-CCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTS-DPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~-~~~~~~~~~~~~~~ 79 (233)
++|+++|+++|+++|+|++|....+.. +. .. ...+++.|+||.++.+|..+|.+++. +...+...-.+..+
T Consensus 187 ~~i~~la~~~g~~livD~a~~~~~~~~----~~-~~---g~div~~S~sK~l~g~g~~~gG~vv~~~~~~~~~~~~~~~l 258 (430)
T 3ri6_A 187 EALSKVVHAKGIPLVVDTTMTPPYLLE----AK-RL---GVDIEVLSSTKFISGGGTSVGGVLIDHGLFEWKSLPSLAPY 258 (430)
T ss_dssp HHHHHHHHTTTCCEEEECTTSCTTTCC----GG-GG---TCSEEEEECCCEEETTEEECCEEEEECSCSCGGGSTTTHHH
T ss_pred HHHHHHHHHcCCEEEEECCCcccccCC----hH-Hc---CCEEEEECCcccccCCCCceEEEEEECChHHhhhccchhhh
Confidence 378999999999999999998643311 11 11 23488999999998887666666653 21112100000000
Q ss_pred hh----hhhHHhhhh-h-hhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCC-----
Q 047983 80 HS----ISLNMRMDD-Y-LLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPE----- 148 (233)
Q Consensus 80 ~~----~~~~~~~~~-~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~----- 148 (233)
.. .....+.+. . ...+...++. .+... ....+.+....++..+++..+.+.|++.|.+.....|.
T Consensus 259 ~~~~g~~~~i~~~~~~~~~~~g~~~~~~-~a~l~---l~~l~~l~~r~~~~~~na~~la~~L~~~p~v~~V~~P~l~~~p 334 (430)
T 3ri6_A 259 YAKAGPMAFLYKARKEVFQNLGPSLSPH-NAYLQ---SLGLETMALRIERSCQNAQELAHWLLSIPQVKCVNHPSLPDSP 334 (430)
T ss_dssp HHHHGGGHHHHHHHHTHHHHHCCCCCHH-HHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHTTCTTCEEEECTTSTTST
T ss_pred hhhhchhhHHHHHHHHHHHhcCCCCCHH-HHHHH---HhhhhhHHHHHHHHHHHHHHHHHHHhCCCCccEEECCCCCCCc
Confidence 00 000011111 1 1222222222 11111 12334556666777889999999998876654323333
Q ss_pred -----------ccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccC------------------
Q 047983 149 -----------GSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVG------------------ 199 (233)
Q Consensus 149 -----------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~------------------ 199 (233)
||+.+| +.++.. .+...+...++..++.+.+|..++
T Consensus 335 ~~~~~~~~~g~Gg~~ls---------f~l~~~------~~~~~~~~~l~~~~~~~s~G~~~sli~~p~~~~h~~~~~~~~ 399 (430)
T 3ri6_A 335 FYAIAKRQFRYAGSILT---------FELESK------EASYRFMDALKLIRRATNIHDNKSLILSPYHVIYALNSHEER 399 (430)
T ss_dssp THHHHHHHCSSCCSEEE---------EECSSH------HHHHHHHHHCSSSEECSCCSCSSCEEECTGGGC---------
T ss_pred cHHHHHHhCCCCceEEE---------EEECCH------HHHHHHHHhCCcceecCCCCCCCceeeCCcccccccCCHHHH
Confidence 665778 555411 144455555666677788887665
Q ss_pred -----CCCcEEEEeec-CHHHHHHH
Q 047983 200 -----LKDWLRITFAV-EPSAFEIG 218 (233)
Q Consensus 200 -----~~~~~Rl~~~~-~~~~l~~~ 218 (233)
.++++|+|++. +.+++.+.
T Consensus 400 ~~~g~~~~liRlsvG~E~~~dl~~d 424 (430)
T 3ri6_A 400 LKLEISPAMMRLSVGIEEIEDLKED 424 (430)
T ss_dssp CGGGSCTTEEEEECCSSCHHHHHHH
T ss_pred HhcCCCCCeEEEEeccCCHHHHHHH
Confidence 15789999996 44444433
No 207
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.18 E-value=2.7e-10 Score=98.44 Aligned_cols=191 Identities=13% Similarity=0.015 Sum_probs=105.6
Q ss_pred ChHHHHHHHcCcEEEEccccC-ccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYG-HLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~-~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|.++|+++|+++|+||+|. ++.+.+....++ . + +.+.|+||..+++|.|+||++++++ ++++. +
T Consensus 139 ~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~---~--~--~~~~s~s~~K~l~~~~~G~~~~~~~-~l~~~--l--- 205 (394)
T 1o69_A 139 DEIVEICKENDIVLIEDAAEALGSFYKNKALGTF---G--E--FGVYSYNGNKIITTSGGGMLIGKNK-EKIEK--A--- 205 (394)
T ss_dssp HHHHHHHHHTTCEEEEECTTCTTCEETTEETTSS---S--S--EEEEECCTTSSSCCSSCEEEEESCH-HHHHH--H---
T ss_pred HHHHHHHHHcCCEEEEECcCcccceeCCcccccc---c--C--cEEEEEeCCccCCCCCceEEEECCH-HHHHH--H---
Confidence 378999999999999999999 566554321111 1 2 4556665444556789999999642 33321 1
Q ss_pred hhhhhHHhhhhhhhhc------------cCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCC
Q 047983 80 HSISLNMRMDDYLLLS------------ESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKP 147 (233)
Q Consensus 80 ~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 147 (233)
.......... ...+....++ .+ .. .+++++..+.++++++++.+.|+++ +.. .++
T Consensus 206 ------~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~-~l--~~-l~~l~~~~~~~~~~~~~l~~~L~~~--~~~-~~~ 272 (394)
T 1o69_A 206 ------RFYSTQARENCLHYEHLDYGYNYRLSNVLGAI-GV--AQ-MEVLEQRVLKKREIYEWYKEFLGEY--FSF-LDE 272 (394)
T ss_dssp ------HHHTBTCCCSSSSCCCSSCCCBCBCCHHHHHH-HH--HH-HTTHHHHHHHHHHHHHHHHHHHTTT--EEC-CCC
T ss_pred ------HHHHHhccccCccccccccCcccCcCHHHHHH-HH--HH-HHHHHHHHHHHHHHHHHHHHHhccc--ccc-cCC
Confidence 1111111000 0011111111 11 01 2345667788899999999999876 332 222
Q ss_pred C----ccE-EEEEecCCCcccccccccc-----------------cCCCCChHHHHHHHHhccCEEEECCccc---CC--
Q 047983 148 E----GSM-FVMYCGSEDKCLLKLNYSL-----------------LEGINSDTEFALKLAKEESIIVLPGITV---GL-- 200 (233)
Q Consensus 148 ~----~g~-~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~ll~~~gi~v~pg~~f---~~-- 200 (233)
. +++ .++ +.++... ..++ +.+.+.+.|.++||.+.+|... .+
T Consensus 273 ~~~~~~~~~~~~---------i~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~L~~~gI~v~~~~~~~~~~p~~ 341 (394)
T 1o69_A 273 LENSRSNRWLST---------ALINFDKNELNACQKDINISQKNITLHP--KISKLIEDLKNKQIETRPLWKAMHTQEVF 341 (394)
T ss_dssp CTTEECCCSSEE---------EEESCCGGGSCCCCEEEECCCCCCCCCH--HHHHHHHHHHHTTCCCBCCCCCGGGCGGG
T ss_pred CCCCcceeEEEE---------EEecchhhcccccccccccccccccccc--CHHHHHHHHHHcCCcccccCCccccchhh
Confidence 1 233 244 3333110 0011 4555666677889999998421 00
Q ss_pred C---------------CcEEEEeec--CHHHHHHHHHHHHHHHHH
Q 047983 201 K---------------DWLRITFAV--EPSAFEIGLGRMKAFYYR 228 (233)
Q Consensus 201 ~---------------~~~Rl~~~~--~~~~l~~~~~~l~~~l~~ 228 (233)
. ..+|+.... ++++++..++.|++++..
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~edi~~~~~~l~~~~~~ 386 (394)
T 1o69_A 342 KGAKAYLNGNSELFFQKGICLPSGTAMSKDDVYEISKLILKSIKA 386 (394)
T ss_dssp TTCEEEECSHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHHHC-
T ss_pred hccCCCCChHHHHHhcCeEEccCCCCCCHHHHHHHHHHHHHHHhc
Confidence 1 224444343 789999999999887654
No 208
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.16 E-value=2.6e-10 Score=99.25 Aligned_cols=115 Identities=14% Similarity=0.098 Sum_probs=69.5
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEE--EEecCCCccccccchhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGW--LVTSDPNGILQDLGVAF 78 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~--~~~~~~~~~~~~~~~~~ 78 (233)
++|+++|++||+++|+||+|....+.. ++. ....+++.|+||.++.+|.++|+ +++.++ ++.
T Consensus 172 ~~i~~la~~~g~~livDe~~~~~~~~~----~~~----~g~div~~S~sK~l~g~g~~~gG~~vv~~~~-~~~------- 235 (400)
T 3nmy_A 172 AAIAVIARKHGLLTVVDNTFASPMLQR----PLS----LGADLVVHSATKYLNGHSDMVGGIAVVGDNA-ELA------- 235 (400)
T ss_dssp HHHHHHHHHTTCEEEEECTTTHHHHCC----GGG----GTCSEEEEETTTTTTCSSSCCCEEEEECSCH-HHH-------
T ss_pred HHHHHHHHHcCCEEEEECCCcccccCC----hhh----cCCcEEEecCccccCCCCCcceeEEEEeCCH-HHH-------
Confidence 378999999999999999998543321 111 13448899999999999988877 444432 333
Q ss_pred hhhhhhHHhhhhhhh-hccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 047983 79 FHSISLNMRMDDYLL-LSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCIT 142 (233)
Q Consensus 79 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 142 (233)
..+..... .+...++... ...+ ..-+.+....+...++.+.+.+.|++.+.+.
T Consensus 236 -------~~l~~~~~~~g~~~~~~~a-~~~l---~~l~~l~~r~~~~~~~a~~l~~~L~~~p~v~ 289 (400)
T 3nmy_A 236 -------EQMAFLQNSIGGVQGPFDS-FLAL---RGLKTLPLRMRAHCENALALAQWLETHPAIE 289 (400)
T ss_dssp -------HHHHHHHHHHCCBCCHHHH-HHHH---HHHTTHHHHHHHHHHHHHHHHHHHTTCTTEE
T ss_pred -------HHHHHHHHhcCCCCCHHHH-HHHH---HhHhHHHHHHHHHHHHHHHHHHHHHcCCCEe
Confidence 22322212 2222333221 1111 1122344556677888888889998765543
No 209
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=99.15 E-value=1.8e-10 Score=101.96 Aligned_cols=197 Identities=17% Similarity=0.123 Sum_probs=104.7
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHS 81 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~ 81 (233)
+|.++|++||+++|.||+...|..+|.-. ....++-.+. +-+++|.. ..|+.+|.+++++ ++.+. .
T Consensus 251 ~lr~lc~~~gillI~DEV~tG~GRtG~~~-a~e~~gv~PD---ivt~gK~l-ggg~P~~av~~~~--~i~~~---~---- 316 (456)
T 4atq_A 251 ALSEWAKEKGIVFIADEVQSGFCRTGEWF-AVDHEGVVPD---IITMAKGI-AGGLPLSAITGRA--DLLDA---V---- 316 (456)
T ss_dssp HHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGTTCCCS---EEEECGGG-GTTSSCEEEEEEH--HHHTT---S----
T ss_pred HHHHHHhhcCCceEecccccccCCccccc-cccccCCCCc---hhhhhhcc-cCcCCceeeEecH--HHHhc---c----
Confidence 68999999999999999999987776422 1211221122 44778984 5789999999987 44421 1
Q ss_pred hhhHHhhhhhhhhccCcchHHHHHHHH--hhh-cHHHHHHHHHHHHHHHHHHHHHHhhc--CCCcccccCCCccEEEEEe
Q 047983 82 ISLNMRMDDYLLLSESVYTTVGAVPQI--LEK-TEEEFFSKITDILREAADICCDRLKE--IPCITCPKKPEGSMFVMYC 156 (233)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~~-~~~~~~~~~~~~~~~~~~~l~~~L~~--~~~~~~~~~~~~g~~~~~~ 156 (233)
.......+++.++...+++++.+ ++. +..+..+++-+++.++.+.+.+.+.. .+.+.. +... |.++-
T Consensus 317 ----~~~~~~~Tf~gnpla~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~~v~~-VRG~-Gl~~g-- 388 (456)
T 4atq_A 317 ----HPGGLGGTYGGNPVACAAALAAIDTMEQHDLNGRARHIEELALGKLRELAAELSAGGGSVVGD-IRGR-GAMLA-- 388 (456)
T ss_dssp ----CTTSSCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCC-----CEEE-EEEE-TTEEE--
T ss_pred ----cccCCCCCCCCChHHHHhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhcccccCCceEE-eeec-ceEEE--
Confidence 11112223333333322333333 111 11223333333444443333333211 011111 1222 44444
Q ss_pred cCCCccccccccccc-CCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEee--cCHHHHHHHHHHHHHHHHHH
Q 047983 157 GSEDKCLLKLNYSLL-EGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFA--VEPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 157 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~--~~~~~l~~~~~~l~~~l~~~ 229 (233)
+.+..+.. .+..+-...+...+.++||++.++..++ +.+|+... .+++++++++++|.+.++.+
T Consensus 389 -------iel~~~~~~~~~~~~~~~v~~~~~~~Gvl~~~~g~~~--~~irl~PpL~it~~~id~~l~~l~~al~a~ 455 (456)
T 4atq_A 389 -------IELVQPGSKEPNAELTKAVAAACLKEGVIILTCGTYG--NVIRLLPPLVISDELLIDGLEVLAAAIKAH 455 (456)
T ss_dssp -------EEEBCTTSCCBCHHHHHHHHHHHHHTTEECEEECTTS--CEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred -------EEEecCCCCCcCHHHHHHHHHHHHHCCCEEEecCCCC--CEEEEECCCCCCHHHHHHHHHHHHHHHHhh
Confidence 22221110 0000122345555668899998754333 67888654 48999999999999999865
No 210
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.15 E-value=1.6e-10 Score=98.94 Aligned_cols=184 Identities=15% Similarity=0.120 Sum_probs=103.8
Q ss_pred ChHHHHHHHcCcEEEEccccCc-cccCCCccccccccCCccCEEEEccC--ccccCCCCceEEEEEecCCCccccccchh
Q 047983 1 FCIEETTKKLGIMVIADEVYGH-LVFGNTHFVPMGVFGSIVPVLTLGSI--SKRWIVPGWRLGWLVTSDPNGILQDLGVA 77 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~-~~~~~~~~~~~~~~~~~~~~i~~~s~--sK~~~~~G~R~G~~~~~~~~~~~~~~~~~ 77 (233)
++|.++|++||+++|+|++|+. ..+++..... ++ .+.+.|| +|.++.+|. .||++++++ .+.
T Consensus 140 ~~i~~la~~~~~~li~D~a~~~g~~~~~~~~~~---~~----di~~~Sf~~~K~l~~~g~-gg~~~~~~~-~l~------ 204 (367)
T 3nyt_A 140 DAINAIASKYGIPVIEDAAQSFGASYKGKRSCN---LS----TVACTSFFPSAPLGCYGD-GGAIFTNDD-ELA------ 204 (367)
T ss_dssp HHHHHHHHHTTCCBEEECTTTTTCEETTEETTS---SS----SEEEEECCTTSSSCCSSC-CEEEEESCH-HHH------
T ss_pred HHHHHHHHHcCCEEEEECccccCCeECCeeccC---CC----CEEEEECCCCCcCCCcCc-eeEEEeCCH-HHH------
Confidence 3789999999999999999985 3333322111 12 3778887 899887676 899998752 232
Q ss_pred hhhhhhhHHhhhhhhh-------------hccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccc
Q 047983 78 FFHSISLNMRMDDYLL-------------LSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCP 144 (233)
Q Consensus 78 ~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 144 (233)
.++..... .+...+....+++.. ..+.+++..++.+++++++.+.|++++ +..+
T Consensus 205 --------~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~----~l~~~~~~~~~~~~~~~~~~~~L~~~~-~~~~ 271 (367)
T 3nyt_A 205 --------TAIRQIARHGQDRRYHHIRVGVNSRLDTLQAAILLP----KLEIFEEEIALRQKVAAEYDLSLKQVG-IGTP 271 (367)
T ss_dssp --------HHHHHHTBTTEEETTEECSCCCBCCCCHHHHHHHHH----HHHTHHHHHHHHHHHHHHHHHHHHHTT-CCCC
T ss_pred --------HHHHHHHhcCCCcCceeeccCcCCCccHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhccCC-eecc
Confidence 22221111 122222222222111 112234455666677778888887763 3322
Q ss_pred cCCCccEEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcc--------cC-------C-----CCcE
Q 047983 145 KKPEGSMFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGIT--------VG-------L-----KDWL 204 (233)
Q Consensus 145 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~--------f~-------~-----~~~~ 204 (233)
..+.++...| ..+.... ++.+.+.+.|+++||.+.++.. |. . ...+
T Consensus 272 ~~~~~~~~~~---------~~~~~~~-----~~~~~l~~~L~~~GI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 337 (367)
T 3nyt_A 272 FIEVNNISVY---------AQYTVRM-----DNRESVQASLKAAGVPTAVHYPIPLNKQPAVADEKAKLPVGDKAATQVM 337 (367)
T ss_dssp CCCTTEECCC---------SSEEEEC-----SSHHHHHHHHHHHTCCCBCSCSSCGGGSGGGCCTTCCCHHHHHHHHHEE
T ss_pred CCCCCCceee---------EEEEEEe-----CCHHHHHHHHHHCCCceeccCCCccccChhhhccCCCChHHHHHHhCeE
Confidence 2333322222 1111110 1455666677788999987643 10 0 3468
Q ss_pred EEEeec--CHHHHHHHHHHHHHHH
Q 047983 205 RITFAV--EPSAFEIGLGRMKAFY 226 (233)
Q Consensus 205 Rl~~~~--~~~~l~~~~~~l~~~l 226 (233)
|+++.. ++++++..++.++++=
T Consensus 338 ~lp~~~~~t~~~i~~v~~~~~~~~ 361 (367)
T 3nyt_A 338 SLPMHPYLDTASIKIICAALTNLE 361 (367)
T ss_dssp EECCCTTCCHHHHHHHHHHHHC--
T ss_pred EccCCCCCCHHHHHHHHHHHHHHh
Confidence 888886 7888888888887653
No 211
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.14 E-value=6.1e-10 Score=98.95 Aligned_cols=212 Identities=13% Similarity=0.025 Sum_probs=118.6
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCcccc-ccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVP-MGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~-~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|+++|++||+++++|.+|+...+..+.... +..+.. --.+..+.+|.++.| ..+|++.+.+. ..+.+ ....
T Consensus 254 ~~I~~la~~~~~~lhvD~A~~~~~~~~~~~~~~~~gi~~--~Ds~~~~~hK~l~~p-~g~g~l~~~~~-~~l~~--~~~~ 327 (475)
T 3k40_A 254 DECGPVGNKHNLWIHVDAAYAGSAFICPEYRHLMKGIES--ADSFNFNPHKWMLVN-FDCSAMWLKDP-SWVVN--AFNV 327 (475)
T ss_dssp HHHHHHHHHTTCEEEEECTTGGGGGGSGGGGGGGTTGGG--CSEEEECHHHHSSCC-SSCEEEEESSG-GGC--------
T ss_pred HHHHHHHHHhCCeEEEeHHhHHHHHhCHhhHHHhcCccc--CCEEEECchhccCCC-CceEEEEEeCH-HHHHH--HhcC
Confidence 37899999999999999999975443322211 112211 125678999975443 56788888774 22211 1100
Q ss_pred hhhhhHHh----hhhhhhhc--cCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEE
Q 047983 80 HSISLNMR----MDDYLLLS--ESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFV 153 (233)
Q Consensus 80 ~~~~~~~~----~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~ 153 (233)
....+... ...+...+ .+.......+...+.....+.++++.++..++++++.+.|++++++..+.+|..++ +
T Consensus 328 ~~~yl~~~~~~~~~~~~~~~~~~sr~~~~l~l~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~l~~~~~~~i-v 406 (475)
T 3k40_A 328 DPLYLKHDMQGSAPDYRHWQIPLGRRFRALKLWFVLRLYGVENLQAHIRRHCNFAKQFGDLCVADSRFELAAEINMGL-V 406 (475)
T ss_dssp ---------------------CCCGGGTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEESSCCBTTE-E
T ss_pred CccccCCCcCCCCCCcccccccCCCcccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCceEE-E
Confidence 00000000 00000111 11111112222222222445678888999999999999999988877644444444 4
Q ss_pred EEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec---CHHHHHHHHHHHHHHHHHHh
Q 047983 154 MYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV---EPSAFEIGLGRMKAFYYRHA 230 (233)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~---~~~~l~~~~~~l~~~l~~~~ 230 (233)
+ ++++... ....++..++.++.++.+.|+..+ ...++|+++.. +++++++++++|+++.++..
T Consensus 407 ~---------f~~~~~~----~~~~~l~~~L~~~g~~~~~~~~~~-g~~~lR~~~~~~~tt~~di~~~~~~i~~~~~~~~ 472 (475)
T 3k40_A 407 C---------FRLKGSN----ERNEALLKRINGRGHIHLVPAKIK-DVYFLRMAICSRFTQSEDMEYSWKEVSAAADEME 472 (475)
T ss_dssp E---------EEESSCH----HHHHHHHHHHHHHTSCBCEEEEET-TEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred E---------EEeCCch----HHHHHHHHHHHhCCcEEEEeeEEC-CEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 4 2332110 013455555555544555554433 35789999874 78999999999999998876
Q ss_pred hcC
Q 047983 231 KKQ 233 (233)
Q Consensus 231 ~~~ 233 (233)
+++
T Consensus 473 ~~~ 475 (475)
T 3k40_A 473 QEQ 475 (475)
T ss_dssp TCC
T ss_pred ccC
Confidence 553
No 212
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.13 E-value=7.7e-10 Score=96.75 Aligned_cols=112 Identities=12% Similarity=0.063 Sum_probs=69.2
Q ss_pred ChHHHHHHH--cCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCce-EEEEEecCCCccccccchh
Q 047983 1 FCIEETTKK--LGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWR-LGWLVTSDPNGILQDLGVA 77 (233)
Q Consensus 1 ~~i~~l~~~--~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R-~G~~~~~~~~~~~~~~~~~ 77 (233)
++|+++|++ +|+++|+|++|...... .++ .+ ...+++.|+||.++.+|.+ .||+++++ .+++
T Consensus 187 ~~I~~la~~~~~g~~livD~a~a~~~~~----~p~-~~---g~Div~~S~sK~lg~~g~~~~G~l~~~~--~~~~----- 251 (415)
T 2fq6_A 187 PAIVAAVRSVVPDAIIMIDNTWAAGVLF----KAL-DF---GIDVSIQAATKYLVGHSDAMIGTAVCNA--RCWE----- 251 (415)
T ss_dssp HHHHHHHHHHCTTCEEEEECTTTTTTSS----CGG-GG---TCSEEEEETTTTTTCSSSCCCEEEEECT--TTHH-----
T ss_pred HHHHHHHHhhcCCCEEEEECCCcccccC----Ccc-cc---CCeEEEEeCccccCCCCCceEEEEEeCH--HHHH-----
Confidence 378999999 99999999999865321 122 12 3348899999999998866 59999876 3332
Q ss_pred hhhhhhhHHhhhhhhh-hccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 047983 78 FFHSISLNMRMDDYLL-LSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPC 140 (233)
Q Consensus 78 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 140 (233)
.+..... .+...++. .+...+ ..-+.+....+...+++..+.+.|++.+.
T Consensus 252 ---------~l~~~~~~~G~~~~~~-~a~~~~---~~l~~l~~r~~~~~~n~~~l~~~L~~~~~ 302 (415)
T 2fq6_A 252 ---------QLRENAYLMGQMVDAD-TAYITS---RGLRTLGVRLRQHHESSLKVAEWLAEHPQ 302 (415)
T ss_dssp ---------HHHHHHHHTTCCCCHH-HHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHTCTT
T ss_pred ---------HHHHHHHhcCCCCCHH-HHHHHH---hhhhHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 2222111 22222222 111111 12234555666677888888888877543
No 213
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.13 E-value=8.4e-11 Score=103.89 Aligned_cols=188 Identities=10% Similarity=0.055 Sum_probs=109.7
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
++|.++|+++|+++++|++|..+..+- .+.....+..... +++.|++|. +.+++++||++++++ .++
T Consensus 251 ~~I~~la~~~g~~v~vD~A~~~~~~g~-~~~~~~~~~~~~D-~~~~s~hK~-~~~p~g~G~l~~~~~-------~~~--- 317 (456)
T 2z67_A 251 VEIAKICENYDIPHIINGAYAIQNNYY-LEKLKKAFKYRVD-AVVSSSDKN-LLTPIGGGLVYSTDA-------EFI--- 317 (456)
T ss_dssp HHHHHHHHHHTCCEEEECTTTTTCHHH-HHHHHHHHTSCCS-EEEEEHHHH-HCCCSSCEEEEESCH-------HHH---
T ss_pred HHHHHHHHHcCCcEEEECcchHHHHHh-hHHHHHhhCCCCC-EEEEcCCCC-cCCCCCeEEEEEcCH-------HHH---
Confidence 478999999999999999999775421 0111111111122 567899996 555689999999642 222
Q ss_pred hhhhHHhhhhhhhhccCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCC---CcccccCCCccEEEEEe
Q 047983 81 SISLNMRMDDYLLLSESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIP---CITCPKKPEGSMFVMYC 156 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~---~~~~~~~~~~g~~~~~~ 156 (233)
..+.... .+....++. ...+++ .....+.+++..+.+.++++++.+.|++++ +... ..|+ .+++
T Consensus 318 -----~~l~~~~-~g~~~~~~~~~~~aal-~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~v-~~~~--~~v~-- 385 (456)
T 2z67_A 318 -----KEISLSY-PGRASATPVVNTLVSL-LSMGSKNYLELVKNQKNSKKLLDELLNDLSKKTGGKF-LDVE--SPIA-- 385 (456)
T ss_dssp -----HHHHTTS-CSCBCSHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCB-CCCC--CSSE--
T ss_pred -----hhcCcCC-CCCCCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCEe-cCCC--CeEE--
Confidence 2221111 111111212 222222 112345678888999999999999998873 4543 4555 3334
Q ss_pred cCCCcccccccccccCCCCChHHHHHHHHhccCE---EEE------CCcccC--CCCcEEEEeec--CHHHHHHHHHHHH
Q 047983 157 GSEDKCLLKLNYSLLEGINSDTEFALKLAKEESI---IVL------PGITVG--LKDWLRITFAV--EPSAFEIGLGRMK 223 (233)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi---~v~------pg~~f~--~~~~~Rl~~~~--~~~~l~~~~~~l~ 223 (233)
+.+..+. ...++ ...|.++|| .+. +|..+. +.+++|++++. +++++++++++|+
T Consensus 386 -------~~~~~~~-----~~~~l-~~~L~~~gi~~~rv~~~~g~f~G~~~~~~~~~~vr~s~~~~~t~eeid~~l~~L~ 452 (456)
T 2z67_A 386 -------SCISVNS-----DPVEI-AAKLYNLRVTGPRGIKKTDHFGNCYLGTYTHDYIVMNAAIGVRTEDIVNSVSKLE 452 (456)
T ss_dssp -------EEEECSS-----CHHHH-HHHHHHTTEESCEEECTTCHHHHTCSSCCSCCEEEEECCTTCCHHHHHHHHHHHH
T ss_pred -------EEEeccc-----HHHHH-HHHHHHcCCCcceEEeecCccccccccccCcchhhhhhhcCCCHHHHHHHHHHHH
Confidence 2231111 02344 444556664 454 223322 25799999883 8999999999998
Q ss_pred HHH
Q 047983 224 AFY 226 (233)
Q Consensus 224 ~~l 226 (233)
+++
T Consensus 453 ~~~ 455 (456)
T 2z67_A 453 KIL 455 (456)
T ss_dssp TC-
T ss_pred HHh
Confidence 654
No 214
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.12 E-value=5.8e-10 Score=99.23 Aligned_cols=208 Identities=13% Similarity=0.047 Sum_probs=116.3
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCcccc-ccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVP-MGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~-~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|+++|++||+++++|.+|+...+..+.... +..+.. .. .+..+.+|.++.| .-+|++.+.+. ..+.+ ....
T Consensus 261 ~~I~~la~~~~~~lhvDaA~g~~~~~~~~~~~~~~gi~~-aD-si~~~~hK~l~~p-~g~g~l~~~~~-~~l~~--~~~~ 334 (481)
T 4e1o_A 261 SELGPICAREGLWLHIDAAYAGTAFLCPEFRGFLKGIEY-AD-SFTFNPSKWMMVH-FDCTGFWVKDK-YKLQQ--TFSV 334 (481)
T ss_dssp HHHHHHHHHHTCEEEEECTTGGGGGGSGGGGGGGTTGGG-CS-EEEECHHHHSSCC-SSCEEEEESBH-HHHHT--TTCC
T ss_pred HHHHHHHHHcCCeEEeehhhHHHHHhChhhHHHhcCccc-CC-EEEEChHHhcCCC-CceEEEEEeCH-HHHHH--HhcC
Confidence 37899999999999999999986543322211 111211 12 4557999986665 55677777763 22110 0000
Q ss_pred hhhhhHHh----hhhhhhhc--cCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCccEEE
Q 047983 80 HSISLNMR----MDDYLLLS--ESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGSMFV 153 (233)
Q Consensus 80 ~~~~~~~~----~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~ 153 (233)
....+... ...+...+ .+.......+...+.....+.++++.+...++++++.+.|++++++....++ ...++
T Consensus 335 ~~~yl~~~~~~~~~~~~~~~~~~~r~~~~l~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~~-~~~~v 413 (481)
T 4e1o_A 335 NPIYLRHANSGVATDFMHWQIPLSRRFRSVKLWFVIRSFGVKNLQAHVRHGTEMAKYFESLVRNDPSFEIPAKR-HLGLV 413 (481)
T ss_dssp CCGGGCCTTTTTSCCGGGGSSSSCCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEECCSCC-CSSEE
T ss_pred CchhccCcccCCCCCcccccccCCCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-ceeEE
Confidence 00000000 00000111 1111111122222222245667888899999999999999998888763344 44455
Q ss_pred EEecCCCcccccccccccCCCCChHHHHHHHHhccC-EEEECCcccCCCCcEEEEeec---CHHHHHHHHHHHHHHHHHH
Q 047983 154 MYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEES-IIVLPGITVGLKDWLRITFAV---EPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~g-i~v~pg~~f~~~~~~Rl~~~~---~~~~l~~~~~~l~~~l~~~ 229 (233)
+ ++++... ....++..++. ++| +.+.|+. ..+..++|+++.. +++++++++++|++++++.
T Consensus 414 ~---------f~~~~~~----~~~~~l~~~L~-~~g~~~~~~~~-~~g~~~lR~~~~~~~tt~~di~~~~~~i~~~~~~l 478 (481)
T 4e1o_A 414 V---------FRLKGPN----SLTENVLKEIA-KAGRLFLIPAT-IQDKLIIRFTVTSQFTTRDDILRDWNLIRDAATLI 478 (481)
T ss_dssp E---------EEESSCH----HHHHHHHHHHH-HHCSSBCEEEE-ETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred E---------EEeCCch----HHHHHHHHHHH-hCCeEEEEeeE-ECCEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 5 3332110 01344555544 456 5555533 3335789999774 6899999999999988775
Q ss_pred h
Q 047983 230 A 230 (233)
Q Consensus 230 ~ 230 (233)
.
T Consensus 479 ~ 479 (481)
T 4e1o_A 479 L 479 (481)
T ss_dssp H
T ss_pred h
Confidence 4
No 215
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=99.11 E-value=1.5e-09 Score=96.45 Aligned_cols=198 Identities=15% Similarity=0.064 Sum_probs=105.0
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCcc-ccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHF-VPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
+|.++|++||+++|.||+.+.|..+|.-. .....+.++ +-+++|..+..++.+|.+++++ ++.+. +.
T Consensus 261 ~lr~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~PD-----i~t~~K~l~gG~~Pl~av~~~~--~i~~~--~~--- 328 (473)
T 4e3q_A 261 AILPILRKYDIPVISDEVICGFGRTGNTWGCVTYDFTPD-----AIISSKNLTAGFFPMGAVILGP--ELSKR--LE--- 328 (473)
T ss_dssp HHHHHHHHTTCCEEEECTTTSSSTTSSSCHHHHTTCCCS-----EEEECGGGGTTSSCCEEEEECH--HHHHH--HH---
T ss_pred HHHHHhcccceEEeccCccccCCcccchhHHHhcCCCCC-----hHHhcccccCCCCCcccccccH--HHHHH--hc---
Confidence 68999999999999999999997776422 111222332 4478998665559999999988 44421 11
Q ss_pred hhhhHHhhhh----hhhhccCcchHH--HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhc---CCCcccccCCCccE
Q 047983 81 SISLNMRMDD----YLLLSESVYTTV--GAVPQILEKTEEEFFSKITDILREAADICCDRLKE---IPCITCPKKPEGSM 151 (233)
Q Consensus 81 ~~~~~~~~~~----~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~---~~~~~~~~~~~~g~ 151 (233)
..... ....+.+.++.. ++++.+ +.-.++ ...+..++.-+++.+.|++ .+.+.. +...|.+
T Consensus 329 -----~~~~~~~~~~hg~T~~Gnpla~Aaala~L-~~i~~~---~l~~~~~~~g~~l~~~L~~l~~~~~v~~-vRG~Gl~ 398 (473)
T 4e3q_A 329 -----TAIEAIEEFPHGFTASGHPVGCAIALKAI-DVVMNE---GLAENVRRLAPRFEERLKHIAERPNIGE-YRGIGFM 398 (473)
T ss_dssp -----HHHHHHSCCCCCCTTTTCHHHHHHHHHHH-HHHHHS---SHHHHHHHHHHHHHHHHHHHTTSTTEEE-EEEETTE
T ss_pred -----cccccccccccCCCCCCCcchhhhhhhhh-hhhccc---cHHHHHHHHHHHHHHHHHHHhcCCCeeE-EeecceE
Confidence 11110 011223334443 333333 111111 1222223333333333333 333322 2333333
Q ss_pred EEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEee--cCHHHHHHHHHHHHHHHHHH
Q 047983 152 FVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFA--VEPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~--~~~~~l~~~~~~l~~~l~~~ 229 (233)
+..-+.+.+.....++. ...-...+.+.+.++||++.|.. +.+|++.. .+++++++++++|.+.+++.
T Consensus 399 ~gielv~~~~~~~~~~~-----~~~~~~~~~~~~~~~Gll~~~~g-----~~i~l~PPL~it~~eid~~~~~l~~al~~v 468 (473)
T 4e3q_A 399 WALEAVKDKASKTPFDG-----NLSVSERIANTCTDLGLICRPLG-----QSVVLCPPFILTEAQMDEMFDKLEKALDKV 468 (473)
T ss_dssp EEEEECSBTTTTBCCCG-----GGCHHHHHHHHHHHTTEECEEET-----TEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEecCccccccccc-----cHHHHHHHHHHHHHCCcEEEecC-----CEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 33211111111000110 00124556666778899998743 56887643 48999999999999999876
Q ss_pred hh
Q 047983 230 AK 231 (233)
Q Consensus 230 ~~ 231 (233)
..
T Consensus 469 ~a 470 (473)
T 4e3q_A 469 FA 470 (473)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 216
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.11 E-value=3e-09 Score=93.16 Aligned_cols=59 Identities=12% Similarity=0.033 Sum_probs=44.4
Q ss_pred ChHHHHHHHcCcEEEEccccCcc-ccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecC
Q 047983 1 FCIEETTKKLGIMVIADEVYGHL-VFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD 66 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~-~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~ 66 (233)
++|.++|+++|+++|+||+|... .+++. .++.... +++.||+|.++++|.|.||+++++
T Consensus 175 ~~i~~l~~~~~~~li~D~a~~~g~~~~~~------~~~~~~d-~~~~s~~~~k~l~~g~gg~~~~~~ 234 (437)
T 3bb8_A 175 AEVRRVADKYNLWLIEDCCDALGSTYDGK------MAGTFGD-IGTVSFYPAKHITMGEGGAVFTQS 234 (437)
T ss_dssp HHHHHHHHHHTCEEEEECTTCTTCEETTE------ETTSSSS-EEEEECSTTSSSCCSSCEEEEESC
T ss_pred HHHHHHHHHcCCEEEEECccccCceECCe------ecccccC-EEEEECcCCcCCCCCCeEEEEeCC
Confidence 37899999999999999999953 33221 1221112 677899888888999999999986
No 217
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.11 E-value=2.7e-09 Score=99.39 Aligned_cols=208 Identities=12% Similarity=0.053 Sum_probs=111.2
Q ss_pred ChHHHHHHHcCcEEEEccccCcc-ccCCCc--ccccc--ccCC-ccCEEEEccCccccCCCCceE-EEEEecCCCccccc
Q 047983 1 FCIEETTKKLGIMVIADEVYGHL-VFGNTH--FVPMG--VFGS-IVPVLTLGSISKRWIVPGWRL-GWLVTSDPNGILQD 73 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~-~~~~~~--~~~~~--~~~~-~~~~i~~~s~sK~~~~~G~R~-G~~~~~~~~~~~~~ 73 (233)
++|+++|++||+++++||+|+.. .+++.. ..++. .++. +++++++.|+||.+ +|.+. |++.+++. .+..
T Consensus 300 ~~I~~la~~~g~~livDeAh~~~~~f~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L--~g~~~gg~I~v~~~--~l~g 375 (730)
T 1c4k_A 300 HEVVKRIGHLCDYIEFDSAWVGYEQFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQ--AGFSQTSQIHKKDS--HIKG 375 (730)
T ss_dssp HHHHHHHGGGBSEEEEECTTCCGGGSSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHS--SCCTTCEEEEEECG--GGTT
T ss_pred HHHHHHHHHcCCeEEEEcccccccccCcccCCcCcccccccCCCCCCEEEEECCCCCC--CCCCCEEEEEecch--hhcC
Confidence 37899999999999999999853 343311 12222 1222 35789999999974 45554 56656652 1100
Q ss_pred c-chhhhhhhhhHHhhhhhh--hhccCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhc-CCCcccccCCC
Q 047983 74 L-GVAFFHSISLNMRMDDYL--LLSESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKE-IPCITCPKKPE 148 (233)
Q Consensus 74 ~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~ 148 (233)
- ..+. . .++.... ..+.+++... +++...+..-..+...+..+.+.++.+.+++.|++ ++++..+ .|+
T Consensus 376 ~~~~i~---~---~~~~~~~~~~~stsp~~~~iaal~aA~~~l~~~~g~~~~~~~~~~a~~lr~~L~~~i~g~~v~-~p~ 448 (730)
T 1c4k_A 376 QLRYCD---H---KHFNNSFNLFMSTSPFYPMYAALDVNAAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFRPF-VPP 448 (730)
T ss_dssp STTCCC---H---HHHHHHHHHHSCSSCCHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEES-SCS
T ss_pred cccccC---H---HHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhCCCeEEc-ccc
Confidence 0 0010 0 1222211 1122333333 33322221111112234456666777777777776 5555432 221
Q ss_pred -------------------------------------ccEEEEEecCCCcccccccccc---------cCCCCChHHHHH
Q 047983 149 -------------------------------------GSMFVMYCGSEDKCLLKLNYSL---------LEGINSDTEFAL 182 (233)
Q Consensus 149 -------------------------------------~g~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~ 182 (233)
.+.+.. |+.++.+..+. ..++ +...+.
T Consensus 449 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i-----dp~kv~i~~pg~~~~~g~~~~~g~--~~~~l~ 521 (730)
T 1c4k_A 449 VVNGKKWEDGDTEDMANNIDYWRFEKGAKWHAYEGYGDNQYYV-----DPNKFMLTTPGINPETGDYEDFGV--PATIVA 521 (730)
T ss_dssp EETTEEGGGSCHHHHTTCGGGGBCCTTCTTTCCTTCCTTCEEE-----CTTEEEEECSSEETTTTEECSSCC--CHHHHH
T ss_pred ccccccccccccccccccchhhccCccchhccccccCCccccc-----CCeEEEEEeCCcccccccccccCC--CHHHHH
Confidence 111111 22222233321 0122 455666
Q ss_pred HHHhccCEEEECCcccCCCCcEEEEeec--CHHHHHHHHHHHHHHHHHHh
Q 047983 183 KLAKEESIIVLPGITVGLKDWLRITFAV--EPSAFEIGLGRMKAFYYRHA 230 (233)
Q Consensus 183 ~ll~~~gi~v~pg~~f~~~~~~Rl~~~~--~~~~l~~~~~~l~~~l~~~~ 230 (233)
+.|.++||.+.+. ....+|++++. ++++++.+++.|.++.+++.
T Consensus 522 ~~L~e~GI~v~~~----~~~~ir~~~s~g~t~e~i~~Ll~aL~~i~~~~~ 567 (730)
T 1c4k_A 522 NYLRDHGIIPEKS----DLNSILFLMTPAETPAKMNNLITQLLQLQRLIE 567 (730)
T ss_dssp HHHHHTTCCCSEE----CSSEEEEECCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCcEEEEC----CCCeEEEEeCCCCCHHHHHHHHHHHHHHHHhcc
Confidence 6777779988542 24678888885 78999999999999887764
No 218
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.10 E-value=7.3e-10 Score=97.84 Aligned_cols=197 Identities=14% Similarity=0.098 Sum_probs=100.6
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCcc-ccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHF-VPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
+|.++|++||+++|.||+.+. ..+... .....+.++ +.+++|..+ .|+.+|.+.+++ ++++. +. ..
T Consensus 245 ~lr~lc~~~g~lLI~DEV~tG--R~G~~~a~e~~gv~PD-----i~t~gK~lg-gG~Piga~~~~~--ei~~~--~~-~~ 311 (454)
T 4ao9_A 245 ALRESATQVGALLVFDEVMTS--RLAPHGLANKLGIRSD-----LTTLGKYIG-GGMSFGAFGGRA--DVMAL--FD-PR 311 (454)
T ss_dssp HHHHHHHHHTCEEEEECTTGG--GGSTTCHHHHHTCCCS-----EEEEEGGGG-TTSSCEEEEECH--HHHGG--GC-TT
T ss_pred HHHHHHhhcCCEEEEECCCcC--CCccccchhccCCCCc-----EEEeccccC-CCCcceeeeeHH--HHHHH--Hh-hc
Confidence 689999999999999999984 333221 122223332 448899854 589999999987 44431 11 00
Q ss_pred hhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhc----CCCcccccCCCccEEEEEe
Q 047983 81 SISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKE----IPCITCPKKPEGSMFVMYC 156 (233)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~~~~~~g~~~~~~ 156 (233)
...+.+..+++.++...+++++.+-.-..++. .+.++++-++|.+.|++ .+... -....|.++...+
T Consensus 312 ----~~~~~h~~T~~gnPla~AAala~L~~l~~~~~----~~~~~~~g~~l~~~L~~l~~~~~~~~-~vrg~G~m~gi~f 382 (454)
T 4ao9_A 312 ----TGPLAHSGTFNNNVMTMAAGYAGLTKLFTPEA----AGALAERGEALRARLNALCANEGVAM-QFTGIGSLMNAHF 382 (454)
T ss_dssp ----TCSCCCCCTTTTCHHHHHHHHHHHHHTSCHHH----HHHHHHHHHHHHHHHHHHHHHHTBSC-EEEEETTEEEEES
T ss_pred ----cCCccccCCCCCCHHHHHHHHHHHHHHhccCh----hHHHHHHHHHHHHHHHHHHhhCCCCE-EEeeeceEEEEEE
Confidence 00011112333333333244444311112222 22333333333333322 22111 1234455544422
Q ss_pred cCCCcccccccccccCCCCCh--HHHHHHHHhccCEEEECCcccCCCCcEEEEeecCHHHHHHHHHHHHHHHHHHhh
Q 047983 157 GSEDKCLLKLNYSLLEGINSD--TEFALKLAKEESIIVLPGITVGLKDWLRITFAVEPSAFEIGLGRMKAFYYRHAK 231 (233)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~~~~~l~~~~~~l~~~l~~~~~ 231 (233)
-++++.+..- .... +. ...+...+.++||.+.|. +++.+++..+++++++.++.+.+++.++..
T Consensus 383 ~~~~~~~~~~----~~~~-d~~~~~~~~~~ll~~Gv~~~p~------~~~~~s~~~T~~dId~~l~al~~~l~~~~a 448 (454)
T 4ao9_A 383 VQGDVRSSED----LAAV-DGRLRQLLFFHLLNEDIYSSPR------GFVVLSLPLTDADIDRYVAAIGSFIGGHGA 448 (454)
T ss_dssp CCSCCCSGGG----GTTC-CHHHHHHHHHHHHHTTEECCTT------CEEECCTTCCHHHHHHHHHHHHHHHHHSGG
T ss_pred ecCCCCCHHH----HHhh-hHHHHHHHHHHHHHCCEEEcCC------CCEEEeCCCCHHHHHHHHHHHHHHHHhccc
Confidence 2222111110 0011 11 123334455779999874 345566666899999999999999998754
No 219
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.09 E-value=2.9e-09 Score=95.39 Aligned_cols=208 Identities=11% Similarity=0.033 Sum_probs=115.1
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccc-cccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFV-PMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~-~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|.++|++||+++++|++|+.+....+... .+..+. ..-+++.|++|.++.| .++|++++++...++++ ....
T Consensus 279 ~~I~~la~~~g~~l~vD~a~~~~~~~~~~~~~~~~g~~--~aD~v~~s~hK~l~~p-~g~G~l~~~~~~~~~~~--~~~~ 353 (515)
T 2jis_A 279 EAIADVCQRHGLWLHVDAAWGGSVLLSQTHRHLLDGIQ--RADSVAWNPHKLLAAG-LQCSALLLQDTSNLLKR--CHGS 353 (515)
T ss_dssp HHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGG--GCSEEEECTTSTTCCC-SCCEEEEESCCSCHHHH--HHCC
T ss_pred HHHHHHHHHcCCeEEEehhhhhHHHhChhhHhhcCCCc--cCCEEEECcccccCCC-CCeeEEEEeChHHHHHH--HhcC
Confidence 3789999999999999999998876543221 222221 2237788999986655 57999999873113321 0000
Q ss_pred hhhhhHHhhhh----------hhhhccCcc--hHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCC
Q 047983 80 HSISLNMRMDD----------YLLLSESVY--TTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKP 147 (233)
Q Consensus 80 ~~~~~~~~~~~----------~~~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 147 (233)
.. ..+.. ....+.... .....+...+..-..+.+++..+...++++++.+.|++++++..+.+|
T Consensus 354 ~~----~yl~~~~~~~~~~~~~~~~~~~~~rr~~al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~~ 429 (515)
T 2jis_A 354 QA----SYLFQQDKFYDVALDTGDKVVQCGRRVDCLKLWLMWKAQGDQGLERRIDQAFVLARYLVEEMKKREGFELVMEP 429 (515)
T ss_dssp -------------CCSCGGGCCGGGCSCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSCC
T ss_pred Cc----hhccCCcccccccCCCCCCCCCCCCcccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCC
Confidence 00 00000 000000000 001111111111234457778888999999999999988777654456
Q ss_pred CccEEEEEecCCCcccccccccccCCC--CCh--H------HHHHHHHhccCEEEECCcccCC-CCcEEEEee---cCHH
Q 047983 148 EGSMFVMYCGSEDKCLLKLNYSLLEGI--NSD--T------EFALKLAKEESIIVLPGITVGL-KDWLRITFA---VEPS 213 (233)
Q Consensus 148 ~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~------~~~~~ll~~~gi~v~pg~~f~~-~~~~Rl~~~---~~~~ 213 (233)
..+.+++ ...+.. ..+. .++ . ..+.+.+.+.|+.......... .+++|++++ .+++
T Consensus 430 ~~~~v~f---------~~~p~~-~~~~~~~~~~~~~l~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~lRis~~~~~~t~e 499 (515)
T 2jis_A 430 EFVNVCF---------WFVPPS-LRGKQESPDYHERLSKVAPVLKERMVKEGSMMIGYQPHGTRGNFFRVVVANSALTCA 499 (515)
T ss_dssp SSSEEEE---------EECCGG-GTTCTTSTTHHHHHHTHHHHHHHHHHHHTSCEEEEEEETTEEEEEEEECCCTTCCHH
T ss_pred CeeEEEE---------EEeCcc-ccccccchhHHHHHHHHHHHHHHHHHhcCCEEEEEEEECCceEEEEEEeCCCCCCHH
Confidence 5566555 111110 0000 001 1 1134455566865532111112 468999995 4899
Q ss_pred HHHHHHHHHHHHHH
Q 047983 214 AFEIGLGRMKAFYY 227 (233)
Q Consensus 214 ~l~~~~~~l~~~l~ 227 (233)
+++.+++.|+++++
T Consensus 500 did~~~~~l~~~~~ 513 (515)
T 2jis_A 500 DMDFLLNELERLGQ 513 (515)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999988764
No 220
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=99.07 E-value=2.9e-11 Score=114.13 Aligned_cols=197 Identities=14% Similarity=0.124 Sum_probs=105.9
Q ss_pred hHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCC-ceEEEEEecCCCccccccchhhhh
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDLGVAFFH 80 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~R~G~~~~~~~~~~~~~~~~~~~~ 80 (233)
+|.++|++||+++|+||++..|..+|..+ .....+-.+. +.++||.++. | +++|++++++ ++++. +..
T Consensus 620 ~l~~lc~~~gilLI~DEV~tGfGRtG~~f-a~e~~gv~PD---iitlsK~L~g-G~~Plgav~~~~--~i~~~--~~~-- 688 (831)
T 4a0g_A 620 VLVNECRNRKIPVIFDEVFTGFWRLGVET-TTELLGCKPD---IACFAKLLTG-GMVPLAVTLATD--AVFDS--FSG-- 688 (831)
T ss_dssp HHHHHHHHTTCCEEEECTTTTTTTTSBSS-THHHHSSCCS---EEEECGGGGT-TSSCCEEEEECH--HHHHT--TCS--
T ss_pred HHHHHHHHcCCeEEEEcCccccccCCCch-hhHhcCCCCc---EEEEeccccc-CccCcEEEEECH--HHHHH--Hhc--
Confidence 68999999999999999999987777533 2222222222 3379998765 6 8999999988 44431 110
Q ss_pred hhhhHHhhhhh-hhhccCcchHH--HHHHHH--hhhc-HHHHHHHHHHHHHHH-HHHHHHHhhcCCCcccccCCCccEEE
Q 047983 81 SISLNMRMDDY-LLLSESVYTTV--GAVPQI--LEKT-EEEFFSKITDILREA-ADICCDRLKEIPCITCPKKPEGSMFV 153 (233)
Q Consensus 81 ~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~--l~~~-~~~~~~~~~~~~~~~-~~~l~~~L~~~~~~~~~~~~~~g~~~ 153 (233)
. .+...+ ...+.+.++.+ ++++.+ ++.. ..+.+.+..+.+++. .+.+.+.+++.+.+.. ....|.++.
T Consensus 689 -~---~~~~~~~hg~T~~g~Pla~Aaala~L~~i~~~~l~~~~~~~~~~l~~~l~~~l~~~l~~~~~v~~-vrg~Gl~~~ 763 (831)
T 4a0g_A 689 -D---SKLKALLHGHSYSAHAMGCATAAKAIQWFKDPETNHNITSQGKTLRELWDEELVQQISSHSAVQR-VVVIGTLFA 763 (831)
T ss_dssp -S---CGGGSCCCCCTTTTCHHHHHHHHHHHHHHHCTTTCTTBCTTSSBBCCCSCHHHHHHHHHSTTEEE-EEEETTEEE
T ss_pred -c---cccccceeecCCcccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcee-EeecccEEE
Confidence 0 011000 11222333333 444433 1111 001111111222111 1223444555554432 445454444
Q ss_pred EEecCCCcccccccccc-cCC-CCChHHHHHHHHhccCEEEECCcccCCCCcEEEEee--cCHHHHHHHHHHHHHHHHHH
Q 047983 154 MYCGSEDKCLLKLNYSL-LEG-INSDTEFALKLAKEESIIVLPGITVGLKDWLRITFA--VEPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 154 ~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~--~~~~~l~~~~~~l~~~l~~~ 229 (233)
+ .+.... ..+ .......+.+.+.++||.+.|+. +.+|++.. .+++++++++++|.+++++.
T Consensus 764 i----------el~~~~~~~~~~~~~a~~~~~~l~e~Gv~v~p~g-----~~lrl~pp~~~t~e~id~~~~~l~~~l~~l 828 (831)
T 4a0g_A 764 L----------ELKADASNSGYASLYAKSLLIMLREDGIFTRPLG-----NVIYLMCGPCTSPEICRRLLTKLYKRLGEF 828 (831)
T ss_dssp E----------EEC---------CHHHHHHHHHHHHTTEECCCBT-----TEEEEECCTTCCHHHHHHHHHHHHHHHTTT
T ss_pred E----------EEecCccccccchHHHHHHHHHHHHCCcEEEecC-----CEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence 3 221100 000 00123445556668899999853 78999844 49999999999999988754
No 221
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.06 E-value=6.5e-09 Score=93.19 Aligned_cols=212 Identities=12% Similarity=0.052 Sum_probs=116.8
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCcc-ccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHF-VPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|+++|++||+++++|++|+......+.. ..+..... --+++.+.+|.++.| ..+|++++++. ..++. ....
T Consensus 268 ~~I~~ia~~~~~~lhvD~a~~~~~~~~~~~~~~~~g~~~--aDsv~~~~hK~l~~p-~g~g~l~~~~~-~~~~~--~~~~ 341 (511)
T 3vp6_A 268 QEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIER--ANSVTWNPHKMMGVL-LQCSAILVKEK-GILQG--CNQM 341 (511)
T ss_dssp HHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGG--CSEEEECTTSTTCCC-SCCEEEEESST-THHHH--HHCC
T ss_pred HHHHHHHHHcCCEEEEEccchhhHhhChhhhhhccCCcc--CCEEEECcccccCCC-cCeEEEEEeCH-HHHHH--Hhcc
Confidence 378999999999999999999866533222 11211211 125567999987766 67899998874 22211 1000
Q ss_pred hhhhhHHh------hhhhhhhc--cCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccc--CCCc
Q 047983 80 HSISLNMR------MDDYLLLS--ESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPK--KPEG 149 (233)
Q Consensus 80 ~~~~~~~~------~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~--~~~~ 149 (233)
+...+... ...+...+ .+....+..+...+.....+.++++.++..++.+++.+.|++.+++.... .|..
T Consensus 342 ~~~yl~~~~~~~~~~~~~~~~~~~~~r~~~al~~~~al~~~g~~gl~~~~~~~~~~a~~l~~~L~~~pg~~l~~~~~p~~ 421 (511)
T 3vp6_A 342 HASYLFQQDKHYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEFEMVFNGEPEH 421 (511)
T ss_dssp CCTTTCCSSCSSCGGGCCGGGSSCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTEEESSSSCCSS
T ss_pred CCccccCcccccccccCccCCCCCCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCe
Confidence 00000000 00000000 01111112222222223567888999999999999999999887877544 4666
Q ss_pred cEEEEEecCCCcccccccccccCCCCCh----------HHHHHHHHhccCEEEECCcccCC--CCcEEEEeec---CHHH
Q 047983 150 SMFVMYCGSEDKCLLKLNYSLLEGINSD----------TEFALKLAKEESIIVLPGITVGL--KDWLRITFAV---EPSA 214 (233)
Q Consensus 150 g~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~ll~~~gi~v~pg~~f~~--~~~~Rl~~~~---~~~~ 214 (233)
++.+| ...|.. ..+..++ ...+.+.|.++|+.+.. ..+.. .+++|+++.. +.++
T Consensus 422 ~~v~f---------~~~p~~-~~~~~~~~~~~~~l~~~~~~l~~~L~~~G~~~~~-~~~~~~~~~~lRi~~~~~~~t~~d 490 (511)
T 3vp6_A 422 TNVCF---------WYIPQS-LRGVPDSPQRREKLHKVAPKIKALMMESGTTMVG-YQPQGDKANFFRMVISNPAATQSD 490 (511)
T ss_dssp SCEEE---------EECCGG-GSSCCCCHHHHHHHHHHHHHHHHHHHHHTSCEEE-EEEETTEEEEEEECCCCTTCCHHH
T ss_pred EEEEE---------EEeCcc-ccccccchhHHHHHHHHHHHHHHHHHhcCCEEEE-EEEeCCceEEEEEEecCCCCCHHH
Confidence 76655 111111 0000001 12345555566765554 22222 3589999953 7888
Q ss_pred HHHHHHHHHHHHHHH
Q 047983 215 FEIGLGRMKAFYYRH 229 (233)
Q Consensus 215 l~~~~~~l~~~l~~~ 229 (233)
++.+++.|+++-+..
T Consensus 491 i~~ll~~i~~~~~~~ 505 (511)
T 3vp6_A 491 IDFLIEEIERLGQDL 505 (511)
T ss_dssp HHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHhh
Confidence 999988888776554
No 222
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.05 E-value=2e-09 Score=100.79 Aligned_cols=64 Identities=13% Similarity=0.005 Sum_probs=44.6
Q ss_pred ChHHHHHHHcCcEEEEccccCcc-ccCCC--ccccccc--cC-CccCEEEEccCccccCCCCce-EEEEEecC
Q 047983 1 FCIEETTKKLGIMVIADEVYGHL-VFGNT--HFVPMGV--FG-SIVPVLTLGSISKRWIVPGWR-LGWLVTSD 66 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~-~~~~~--~~~~~~~--~~-~~~~~i~~~s~sK~~~~~G~R-~G~~~~~~ 66 (233)
++|+++|++||+++++||+|+.. .+++. +..++.. .+ ..+++|++.|++|.+ +|.+ .|++++++
T Consensus 331 ~~I~~ia~~~~~~livDeA~~~~~~~~~~~~~~~~~~g~~aD~~~~~~iv~~S~hK~L--~g~~~g~~i~~~~ 401 (755)
T 2vyc_A 331 KEAQDLLEKTSDRLHFDEAWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLL--NALSQASYIHVRE 401 (755)
T ss_dssp HHHHHHHTTTCSEEEEECTTCTTGGGCGGGTTSSSSCSCCCCCSSBEEEEEEETTTSS--SCCTTCEEEEEEC
T ss_pred HHHHHHHHHcCCEEEEECcCchhcccCcccCCcchhcCCcCCccCCCeEEEECccccc--cCcCCeeeeeecC
Confidence 37899999999999999999854 33321 1223322 23 246788999999974 4665 57787876
No 223
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.01 E-value=3.8e-09 Score=92.32 Aligned_cols=58 Identities=16% Similarity=0.212 Sum_probs=44.6
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEec
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTS 65 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~ 65 (233)
++|.++|++||+++|+|++|..+.+.+. ++ .. ...+++.|+||.++.+|.|+|++++.
T Consensus 164 ~~i~~~a~~~g~~livD~~~~~~g~~~~---~~-~~---~~Di~~~s~~K~l~~~g~~~G~~~~~ 221 (421)
T 2ctz_A 164 EALAQAAREKGVALIVDNTFGMGGYLLR---PL-AW---GAALVTHSLTKWVGGHGAVIAGAIVD 221 (421)
T ss_dssp HHHHHHHHHHTCEEEEECGGGGGGTSCC---GG-GG---TCSEEEEETTTTTTCSSCCCCEEEEE
T ss_pred HHHHHHHHHcCCEEEEECCcccccccCC---cc-cc---CCeEEEECCcccccCCCCcEEEEEEe
Confidence 3789999999999999999933333222 12 12 23488999999999999999998886
No 224
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=98.73 E-value=7.1e-08 Score=83.07 Aligned_cols=191 Identities=11% Similarity=0.016 Sum_probs=101.6
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCccccccccCC-ccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGS-IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFF 79 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~ 79 (233)
++|.++|+ ||++||+|++|......... ++. .. .+-.++..+.+|.++. | +.|+++++++ ++.+. +
T Consensus 146 ~~i~~la~-~~~~vi~D~a~a~g~~~~~~--~~g--~~~~d~~~~S~~~~K~l~~-g-~gG~~~~~~~-~l~~~---~-- 212 (377)
T 3ju7_A 146 EEYEELEK-KGVPVVVDAAPGFGLMNGGM--HYG--QDFSGMIIYSFHATKPFGI-G-EGGLIYSKNE-EDIQR---I-- 212 (377)
T ss_dssp HHHHHHHH-TTCCBEEECTTCTTCEETTE--ETT--TTCSSEEEEECBTTSSSCC-B-SCEEEEESCH-HHHHH---H--
T ss_pred HHHHHHHh-cCCEEEEECCCccCCeECCE--ecc--CCCCcEEEEECCCCCcCCC-C-CcEEEEECCH-HHHHH---H--
Confidence 37899999 99999999999864321111 110 11 1222333345698765 5 6788888763 23321 1
Q ss_pred hhhhhHHhhhhhh----------hhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCc
Q 047983 80 HSISLNMRMDDYL----------LLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEG 149 (233)
Q Consensus 80 ~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~ 149 (233)
..++... ..+.......+++... .-+.+....++.+++++.+.+.|++++++.....+..
T Consensus 213 ------~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~----~l~~l~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~ 282 (377)
T 3ju7_A 213 ------KRMGNFGFDTNRECTMMGFNCKMSEYAAAIGIA----TMKKWDDKLKERTRISEWYKQLLQSNGLMKKGWQLQK 282 (377)
T ss_dssp ------HHHTBTTBCTTSCBCSSCCBCCCCHHHHHHHHH----HHHTHHHHHHHHHHHHHHHHHHHHHTTTTTTTCBCCC
T ss_pred ------HHHHhcCCCCCCceeeccccCCCCHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhcCCCCccccccCCC
Confidence 1111110 1111122221222111 1234455666667777777788877654311122322
Q ss_pred c---E--EEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEECCcc--c------C-----C--------CCc
Q 047983 150 S---M--FVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGIT--V------G-----L--------KDW 203 (233)
Q Consensus 150 g---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~--f------~-----~--------~~~ 203 (233)
+ + |+. +.++.. .+.+.+.+.|+++||.+.++.. . . . ...
T Consensus 283 ~~~~~~~~~~---------~~~~~~------~~~~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 347 (377)
T 3ju7_A 283 TEAVIQQFMP---------ILCPEE------VRNKQVIEDLKKQKIEARLYFSPSCHQQVLFRNYKSTDLTRTNKIAKRI 347 (377)
T ss_dssp CSCBCCSSEE---------EECCTT------SCHHHHHHHHHTTTBCCBCTTSSCGGGSGGGTTSCBSCCHHHHHHHHHE
T ss_pred CCcceEEEEE---------EEeCCh------hhHHHHHHHHHHCCCceecccCCccccchhhhcCCCCCCHHHHHHHhCE
Confidence 2 1 222 222210 1367777888899999987651 1 0 0 346
Q ss_pred EEEEeec--CHHHHHHHHHHHHHHHHHH
Q 047983 204 LRITFAV--EPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 204 ~Rl~~~~--~~~~l~~~~~~l~~~l~~~ 229 (233)
+|+++.. ++++++..++.|++++...
T Consensus 348 l~lp~~~~~t~~di~~v~~~l~~~~~~~ 375 (377)
T 3ju7_A 348 VSLPLWEGMTKEIVEQIVICLGQKVVSA 375 (377)
T ss_dssp EEECCCTTCCHHHHHHHHHHHTC-----
T ss_pred EECCCCCCCCHHHHHHHHHHHHHHHhcc
Confidence 8888886 7899999999998877653
No 225
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=98.72 E-value=2e-07 Score=80.02 Aligned_cols=95 Identities=14% Similarity=0.125 Sum_probs=59.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCcccccCC-CccE-EEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEE
Q 047983 115 EFFSKITDILREAADICCDRLKEIPCITCPKKP-EGSM-FVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIV 192 (233)
Q Consensus 115 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v 192 (233)
+++++..+..+++++++.+.|++++++..+..+ .+++ .++ +.++... +. +.+.+.+.|.++||.+
T Consensus 266 ~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~---------i~~~~~~--~~--~~~~l~~~L~~~gI~v 332 (390)
T 3b8x_A 266 KKLPRFISVRRKNAEYFLDKFKDHPYLDVQQETGESSWFGFS---------FIIKKDS--GV--IRKQLVENLNSAGIEC 332 (390)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCSSEEECCCCSBCCCCEEE---------EEECTTS--CC--CHHHHHHHHHHTTBCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCcccEEEE---------EEecCcC--cc--cHHHHHHHHHHCCCCe
Confidence 456678888889999999999887766542222 2333 244 3333110 11 4455666677889999
Q ss_pred EC---CcccCC----------------------CCcEEEEeec--CHHHHHHHHHHH
Q 047983 193 LP---GITVGL----------------------KDWLRITFAV--EPSAFEIGLGRM 222 (233)
Q Consensus 193 ~p---g~~f~~----------------------~~~~Rl~~~~--~~~~l~~~~~~l 222 (233)
.+ |+.... .+.+|+++.. ++++++.+++.|
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~t~~di~~i~~~l 389 (390)
T 3b8x_A 333 RPIVTGNFLKNTDVLKYFDYTVHNNVDNAEYLDKNGLFVGNHQIELFDEIDYLREVL 389 (390)
T ss_dssp BCSTTSSGGGCHHHHTTCEEEESSCCHHHHHHHHHEEEEECCSSCCHHHHHHHHHHT
T ss_pred eeecCCchhhcchhhhcCCCCCcCCChHHHHHhcCEEEeeCCCCCCHHHHHHHHHhh
Confidence 87 321111 1358999886 788888877654
No 226
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=98.61 E-value=7.3e-07 Score=78.23 Aligned_cols=202 Identities=14% Similarity=0.131 Sum_probs=109.0
Q ss_pred ChHHHHHHHcCcEEEEccccCccc-cCCCccccccccCCccCEEEEccCccccCCC-CceEEEEE-ecCCCccccccchh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLV-FGNTHFVPMGVFGSIVPVLTLGSISKRWIVP-GWRLGWLV-TSDPNGILQDLGVA 77 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~-~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~-G~R~G~~~-~~~~~~~~~~~~~~ 77 (233)
++|+++|++||+++++||+|+... +..+.+.....++.-| +++.|.-|.+..| | |.++ ..++ ++ +
T Consensus 236 ~eIaeIch~~gIpllVDeAhGah~~~~~~lp~sA~~~GrAD--~vVqS~HK~llvpIG---G~ii~~~d~-e~------l 303 (501)
T 3hl2_A 236 EELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGARVGRID--AFVQSLDKNFMVPVG---GAIIAGFND-SF------I 303 (501)
T ss_dssp HHHHHHHHHHTCCEEEECTTCTTCHHHHHHHHHHHHHSCCC--EEEEEHHHHHCCCSS---CEEEEESCH-HH------H
T ss_pred HHHHHHHHHcCCeEEEeCcchhhhhhhhhhHHHHHhcCCCc--EEEecccccceeecC---ceEEEeCCH-HH------H
Confidence 479999999999999999999644 2221122232333112 6788999986555 4 4444 4442 22 2
Q ss_pred hhhhhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcC---CCcccccCCCccEEEE
Q 047983 78 FFHSISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEI---PCITCPKKPEGSMFVM 154 (233)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---~~~~~~~~~~~g~~~~ 154 (233)
.++.....-..+..+....+..++ .-+.+-.+++.+...++.+++.+.|+++ .+......|...+-+.
T Consensus 304 --------~~~~~~yPGr~S~Spsldl~~tLL-~lGr~Gy~~ll~e~~ela~~L~~~L~~la~~~ge~ll~~~~n~is~a 374 (501)
T 3hl2_A 304 --------QEISKMYPGRASASPSLDVLITLL-SLGSNGYKKLLKERKEMFSYLSNQIKKLSEAYNERLLHTPHNPISLA 374 (501)
T ss_dssp --------HHHHHTSCSCBCSHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCBCCCTTCSSEEE
T ss_pred --------HHHHHhCCCCCCCcHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhcCCCCCceeEE
Confidence 333222111111222212333333 2334445777777777777777777663 1222234454555555
Q ss_pred EecCCCcccccccccccCCCCChHHHHHHHHhc--cCEEEEC-Cc----------ccCC------CCcEEEEeec--CHH
Q 047983 155 YCGSEDKCLLKLNYSLLEGINSDTEFALKLAKE--ESIIVLP-GI----------TVGL------KDWLRITFAV--EPS 213 (233)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~--~gi~v~p-g~----------~f~~------~~~~Rl~~~~--~~~ 213 (233)
+.+..-......+-..+-..+... .|-.|+| |. .||. ..|+-++-+. +.+
T Consensus 375 ---------~tl~~~~~~~~~~~t~~gs~Lf~r~vsG~Rvv~~~~~~~i~g~~f~~~g~h~~~~~~~yl~~a~aiG~~~~ 445 (501)
T 3hl2_A 375 ---------MTLKTLDEHRDKAVTQLGSMLFTRQVSGARVVPLGSMQTVSGYTFRGFMSHTNNYPCAYLNAASAIGMKMQ 445 (501)
T ss_dssp ---------EECTTSCTTTSCHHHHHHHHHHHTTCCSCEEECTTCCEEETTEEESSTTTTSSCCSSCEEEEECCTTCCHH
T ss_pred ---------EecccccccccccHHHHHHHHHhcCCCcceeecCCCceEECCeeecCcccCCCCCCchHHHHHHHcCCCHH
Confidence 223211000000122333333322 2555554 55 4553 4677665553 899
Q ss_pred HHHHHHHHHHHHHHHHhhc
Q 047983 214 AFEIGLGRMKAFYYRHAKK 232 (233)
Q Consensus 214 ~l~~~~~~l~~~l~~~~~~ 232 (233)
+++..++||.+.+.++.++
T Consensus 446 ~v~~~~~~l~~~~~~~~~~ 464 (501)
T 3hl2_A 446 DVDLFIKRLDRCLKAVRKE 464 (501)
T ss_dssp HHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 9999999999999988765
No 227
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=98.61 E-value=9e-08 Score=83.92 Aligned_cols=114 Identities=14% Similarity=0.033 Sum_probs=73.0
Q ss_pred ChHHHHHHH--cCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCC-ceEEEEEecCCCccccccchh
Q 047983 1 FCIEETTKK--LGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDLGVA 77 (233)
Q Consensus 1 ~~i~~l~~~--~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~R~G~~~~~~~~~~~~~~~~~ 77 (233)
++|+++|++ +|+++|+|++|..+.+...+ . .. ...++++|+||.++.+| .+.||+++++ +++
T Consensus 200 ~~i~~la~~~~~g~~livD~a~~~~~~~~~p---~-~~---gaDiv~~S~sK~lgg~g~~~gG~i~~~~--~li------ 264 (427)
T 3i16_A 200 KSIVDCVKNIRKDIICFVDNCYGEFMDTKEP---T-DV---GADLIAGSLIKNIGGGIAPTGGYLAGTK--DCI------ 264 (427)
T ss_dssp HHHHHHHHHHCTTSEEEEECTTTTTSSSSCG---G-GG---TCSEEEEETTSGGGTTTCCSCEEEEECH--HHH------
T ss_pred HHHHHHHHHhCCCCEEEEECCCccccccCCc---c-cc---CCeEEEecCcccCCCCCCceEEEEEECH--HHH------
Confidence 378999999 99999999999987643321 1 11 22388999999988766 6789999987 444
Q ss_pred hhhhhhhHHhhhhhh---hhccCcch-HHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 047983 78 FFHSISLNMRMDDYL---LLSESVYT-TVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPC 140 (233)
Q Consensus 78 ~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 140 (233)
.+++... .++....+ ...+...+ ..-+....+.+...+++..+.+.|++++.
T Consensus 265 --------~~l~~~~~~~~~g~~~~~~~~~a~~~l---~gl~~~~~r~~~~~~~a~~la~~L~~~g~ 320 (427)
T 3i16_A 265 --------EKTSYRLTVPGIGGECGSTFGVVRSMY---QGLFLAPHISMEALKGAILCSRIMELAGF 320 (427)
T ss_dssp --------HHHHHHHSCTTTGGGCCCCTTCHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred --------HHHHHhcccCccCccCCccHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 3333311 11111111 11111111 22344566778888999999999988743
No 228
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=98.59 E-value=7.6e-07 Score=82.57 Aligned_cols=201 Identities=11% Similarity=0.002 Sum_probs=101.8
Q ss_pred ChHHHHHHHcCcEEEEccccCccc-cCCCccccccccCC---ccC-EEEEccCccccCCCCceEEEEEecCCCccccccc
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLV-FGNTHFVPMGVFGS---IVP-VLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLG 75 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~-~~~~~~~~~~~~~~---~~~-~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~ 75 (233)
++|+++|++++ +++||+|+... +++. .....++.. .+. ++++.|++|+++.+ ...||+.+++ .+.. .
T Consensus 316 ~~I~ela~~~~--livDEAH~~~~~f~~~-~~~~~al~~g~~aD~vii~~~S~hKtL~gl-tqgs~i~v~~--~i~~--~ 387 (715)
T 3n75_A 316 DFIKKTLDVKS--IHFDSAWVPYTNFSPI-YEGKCGMSGGRVEGKVIYETQSTHKLLAAF-SQASMIHVKG--DVNE--E 387 (715)
T ss_dssp HHHHHHCCCSE--EEEECTTCTTGGGSGG-GTTSSTTSSSCCTTCEEEEEECHHHHSSCC-TTCEEEEEES--CCCH--H
T ss_pred HHHHHHhCcCc--EEEccccccccccCCc-cccccccccCcCCCEEEEEEecccccccCC-CCeeEEEeCc--hhhH--H
Confidence 36888898764 79999999653 4432 111222221 244 37799999985532 1348999887 2211 1
Q ss_pred hhhhhhhhhHHhhhhhhhhccCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCC------cccccC--
Q 047983 76 VAFFHSISLNMRMDDYLLLSESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPC------ITCPKK-- 146 (233)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~------~~~~~~-- 146 (233)
.+ ++...... +.+++... +++...+..-......+.++.+.++.+.+++.|+++++ +.++.+
T Consensus 388 ~~--------~~~~~~~~-STSpsy~~~AsldaA~~~~~~~~g~~~~~~l~~~a~~~r~~L~~i~~~~~~~~~~~~~~~~ 458 (715)
T 3n75_A 388 TF--------NEAYMMHT-TTSPHYGIVASTETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDH 458 (715)
T ss_dssp HH--------HHHHHHTS-CSSCCHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCEESSCSC
T ss_pred HH--------HHHHHhhc-CCCchHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhhcccceeeccCccc
Confidence 12 33333222 33444433 33322211101112233455556666666666654321 111110
Q ss_pred --------------------CCccEEEEEecCCCcccccccccccC--------CCCChHHHHHHHHhccCEEEECCccc
Q 047983 147 --------------------PEGSMFVMYCGSEDKCLLKLNYSLLE--------GINSDTEFALKLAKEESIIVLPGITV 198 (233)
Q Consensus 147 --------------------~~~g~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~ll~~~gi~v~pg~~f 198 (233)
...+.+.. ||.++.+..+... ++ +...+.+.|+++||.+--
T Consensus 459 ~~~~~~~~~~~~~~w~gf~~~~~~~~~~-----Dp~Kl~i~~~~~~~~G~~~~~Gi--~g~~~~~~L~~~~I~~E~---- 527 (715)
T 3n75_A 459 IDTTECWPLRSDSTWHGFKNIDNEHMYL-----DPIKVTLLTPGMEKDGTMSDFGI--PASIVAKYLDEHGIVVEK---- 527 (715)
T ss_dssp CCSCSCEECCTTCCTTCCTTCCSSSEEE-----CTTEEEEECSCBCTTSCBCSSCC--CHHHHHHHHHHTTCCCSE----
T ss_pred ccchhhhccCcccccccccccccCcccC-----CCeEEEEEcCCCCCCCccccCCC--cHHHHHHHHHHCCCEEEe----
Confidence 01122223 7777666654331 33 455677778888998743
Q ss_pred CCCCcEEE--EeecCHHHHHHHHHHHHHHHHHH
Q 047983 199 GLKDWLRI--TFAVEPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 199 ~~~~~~Rl--~~~~~~~~l~~~~~~l~~~l~~~ 229 (233)
.....+=+ +++.++++++.+++.|.++-+.+
T Consensus 528 ~d~~~vl~l~s~g~~~~~~~~L~~aL~~~~~~~ 560 (715)
T 3n75_A 528 TGPYNLLFLFSIGIDKTKALSLLRALTDFKRAF 560 (715)
T ss_dssp EETTEEEEECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred cCCCcEEEEeCCCCCHHHHHHHHHHHHHHHHHh
Confidence 22233322 44447777777777777665544
No 229
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=98.55 E-value=3.2e-06 Score=72.87 Aligned_cols=191 Identities=12% Similarity=0.049 Sum_probs=110.2
Q ss_pred HHHHcCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhhhhhhH
Q 047983 6 TTKKLGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHSISLN 85 (233)
Q Consensus 6 l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (233)
+|+++|+++++|-+.+- +..+..+..+ + +.+.|--|.+|.+| +|++.+++ .+++++.-. ... .
T Consensus 172 i~~~~~~~~~vD~~q~~----g~~~id~~~~---~--~~~~s~~K~~gp~G--~g~l~~~~--~~l~~~~~~--~p~-~- 234 (377)
T 3e77_A 172 IPDVKGAVLVCDMSSNF----LSKPVDVSKF---G--VIFAGAQKNVGSAG--VTVVIVRD--DLLGFALRE--CPS-V- 234 (377)
T ss_dssp CCCCTTCCEEEECTTTT----TSSCCCGGGC---S--EEEEEGGGTTSCTT--CEEEEEET--TSCSCCCTT--SCG-G-
T ss_pred hhccCCCEEEEEccccc----CCCCCchhhc---C--EEEEecccccCCCc--cEEEEEcH--HHHhhccCC--CCc-h-
Confidence 46778999999998886 2233333322 2 46788999999888 68888877 444321100 000 0
Q ss_pred Hhhhhh--hhhccCcchH-H-HHHHHHhhhcHHH-HHHHHHHHHHHHHHHHHHHhhcCCCccccc-CC--CccEEEEEec
Q 047983 86 MRMDDY--LLLSESVYTT-V-GAVPQILEKTEEE-FFSKITDILREAADICCDRLKEIPCITCPK-KP--EGSMFVMYCG 157 (233)
Q Consensus 86 ~~~~~~--~~~~~~~~~~-~-~~~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~--~~g~~~~~~~ 157 (233)
-.+... .....++++. . .++...++--.+. =++++.++.++..+++++.|++++++.... .+ .++..+.
T Consensus 235 ~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivs--- 311 (377)
T 3e77_A 235 LEYKVQAGNSSLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIP--- 311 (377)
T ss_dssp GCHHHHHTTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSEECCSCGGGBCSSEEE---
T ss_pred hhHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhcCCceecCCCHHHcCCcEEE---
Confidence 000100 0111222222 2 4444333211112 267788889999999999999886654211 11 1233233
Q ss_pred CCCcccccccccccCCCCC--hH-HHHHHHHhccCEEEECCcccCCCCcEEEEeec--CHHHHHHHHHHHHHHHHHH
Q 047983 158 SEDKCLLKLNYSLLEGINS--DT-EFALKLAKEESIIVLPGITVGLKDWLRITFAV--EPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~--~~-~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~--~~~~l~~~~~~l~~~l~~~ 229 (233)
+.++ ++.. +. ..+...+.++||.+.+|.. ..+.+|+|+.. ++++++.+++.|+++++++
T Consensus 312 ------f~~~-----~~~~~~~~~~~~l~~l~~~Gi~~~~g~~--~~g~iRiS~~~~~t~edId~l~~al~~~~~~~ 375 (377)
T 3e77_A 312 ------FRIG-----NAKGDDALEKRFLDKALELNMLSLKGHR--SVGGIRASLYNAVTIEDVQKLAAFMKKFLEMH 375 (377)
T ss_dssp ------EEES-----STTCCHHHHHHHHHHHHHTTEESCBCCT--TTCSEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred ------EEcC-----CCCCchhHHHHHHHHHHHCCcEEeCCCC--cCCEEEEECCCCCCHHHHHHHHHHHHHHHHHc
Confidence 2233 1111 11 2344455578999988753 24679999996 7999999999999998764
No 230
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=98.53 E-value=3.6e-07 Score=79.65 Aligned_cols=112 Identities=13% Similarity=0.018 Sum_probs=70.7
Q ss_pred ChHHHHHHH--cCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCC-ceEEEEEecCCCccccccchh
Q 047983 1 FCIEETTKK--LGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDLGVA 77 (233)
Q Consensus 1 ~~i~~l~~~--~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~R~G~~~~~~~~~~~~~~~~~ 77 (233)
++|+++|++ ||+++|+|++|..+.+...+ . .. ...++++|+||.++.+| .+.||+++++ ++++
T Consensus 183 ~~I~~la~~~~~~~~livD~a~~~~~~~~~p---~-~~---g~Div~~S~sK~lgg~~~~~GG~v~~~~--~li~----- 248 (409)
T 3jzl_A 183 KEMIVFVKNINPEVIVFVDNCYGEFVEYQEP---P-EV---GADIIAGSLIKNPGGGLAKTGGYIAGKE--ALVD----- 248 (409)
T ss_dssp HHHHHHHHHHCTTCEEEEECTTCTTTSSCCS---G-GG---TCSEEEEETTSGGGTTTCSSCEEEEECH--HHHH-----
T ss_pred HHHHHHHHhhCCCCEEEEeCCcccccccCCc---c-cc---CCeEEEECccccCCccCCceEEEEEeCH--HHHH-----
Confidence 378999999 99999999999987643221 1 12 22389999999988776 4469999986 4543
Q ss_pred hhhhhhhHHhhhhh-----hhhccCcch-HHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 047983 78 FFHSISLNMRMDDY-----LLLSESVYT-TVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPC 140 (233)
Q Consensus 78 ~~~~~~~~~~~~~~-----~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 140 (233)
+++.. .....++.. ...+ ++ ..-+.....++...+++..+.+.|++++.
T Consensus 249 ---------~l~~~~~~~~~g~~~g~~~~~~~~---~l--~gl~~~~~r~~~~~~~a~~la~~L~~~g~ 303 (409)
T 3jzl_A 249 ---------LCGYRLTTPGIGREAGASLYSLLE---MY--QGFFLAPHVTAQAIKGARFTAAMLAEFGV 303 (409)
T ss_dssp ---------HHHHHHSCTTTGGGCCCCTTCHHH---HH--HHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred ---------HHHHHhccccccccccccHHHHHH---HH--HHHhhHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 22221 111111111 1111 11 11233456677788999999999988743
No 231
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=98.50 E-value=2.5e-07 Score=81.04 Aligned_cols=113 Identities=12% Similarity=0.027 Sum_probs=70.7
Q ss_pred ChHHHHHHH--cCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCC-ceEEEEEecCCCccccccchh
Q 047983 1 FCIEETTKK--LGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDLGVA 77 (233)
Q Consensus 1 ~~i~~l~~~--~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~R~G~~~~~~~~~~~~~~~~~ 77 (233)
++|+++|++ +|+++|+|++|..+.+...+ .. . ...++++|+||.++..| .+.||+++++ +++
T Consensus 200 ~~i~~ia~~~~~g~~livD~a~~~~~~~~~p---~~-~---gaDiv~~S~sK~lgg~g~~~GG~i~~~~--~li------ 264 (427)
T 3hvy_A 200 AEIIKSIREVNENVIVFVDNCYGEFVEEKEP---TD-V---GADIIAGSLIKNIGGGIATTGGYIAGKE--EYV------ 264 (427)
T ss_dssp HHHHHHHHHHCSSSEEEEECTTCTTTSSSCG---GG-G---TCSEEEEETTSGGGTTTCCSCEEEEECH--HHH------
T ss_pred HHHHHHHHHhCCCCEEEEECCccccccCCCC---cc-c---CCeEEEECCcccccccccceEEEEEECH--HHH------
Confidence 378999999 89999999999987643321 11 1 22388999999988766 5669999876 444
Q ss_pred hhhhhhhHHhhhhhh---hhc--cCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 047983 78 FFHSISLNMRMDDYL---LLS--ESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPC 140 (233)
Q Consensus 78 ~~~~~~~~~~~~~~~---~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 140 (233)
.+++... .++ .++ +...+...+ ..-.....+.+...+++..+.+.|++++.
T Consensus 265 --------~~l~~~~~~~~~g~~~~~-~~~~a~~~~---~gl~~~~~r~~~~~~~a~~la~~L~~~g~ 320 (427)
T 3hvy_A 265 --------TQATFRVTVPGIGGECGS-TFGVMRSLY---EGLFMAPHVTIEAVKGAVFCARIMELAGF 320 (427)
T ss_dssp --------HHHHHHHSCTTTGGGCCC-CTTCHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred --------HHHHHHhhcCCcccccCC-CHHHHHHHH---HhHhHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 3333211 111 111 111111111 12233455777888899999999988743
No 232
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=98.43 E-value=2.6e-05 Score=67.36 Aligned_cols=189 Identities=13% Similarity=0.093 Sum_probs=104.2
Q ss_pred cCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhhhhhhHHhhh
Q 047983 10 LGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHSISLNMRMD 89 (233)
Q Consensus 10 ~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (233)
+|+++++|-+.+- +..+..+..+ + +.+.|--|.+|.+| +|++.+++ .+++++.-..-...+......
T Consensus 191 ~g~~~~vDa~qs~----g~~pidv~~~---~--~~~~s~hK~lGP~G--~g~l~v~~--~~~~~~~~~~p~~~~~~~~~~ 257 (386)
T 3qm2_A 191 PEVVVTADFSSTI----LSAPLDVSRY---G--VIYAGAQKNIGPAG--LTLVIVRE--DLLGKAHESCPSILDYTVLND 257 (386)
T ss_dssp TTCCEEEECTTTT----TSSCCCGGGC---S--EEEEETTTTTCCTT--EEEEEEEG--GGCSCCCTTSCGGGCHHHHHH
T ss_pred CCCEEEEEccccc----CCCCCCcccc---C--EEEEecccccCCCc--cEEEEECH--HHHhhhcccCCcHHHHHHHhh
Confidence 6899999988775 3333333332 2 45689999998888 78888887 444321100000000000000
Q ss_pred hhhhh-ccCcchHHHHHHHHhhhcHHH-HHHHHHHHHHHHHHHHHHHhhcCCCcccccCC--CccEEEEEecCCCccccc
Q 047983 90 DYLLL-SESVYTTVGAVPQILEKTEEE-FFSKITDILREAADICCDRLKEIPCITCPKKP--EGSMFVMYCGSEDKCLLK 165 (233)
Q Consensus 90 ~~~~~-~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~--~~g~~~~~~~~~~~~~~~ 165 (233)
..... +.+.... .++...++--.+. =+++..++.++.++++++.|++++.......+ .+...+. +.
T Consensus 258 ~~~~~gTp~v~~i-~~l~~Al~~~~~~gG~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~iv~---------f~ 327 (386)
T 3qm2_A 258 NDSMFNTPPTFAW-YLSGLVFKWLKAQGGVAAMHKINQQKAELLYGVIDNSDFYRNDVAQANRSRMNVP---------FQ 327 (386)
T ss_dssp C-------CCSHH-HHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTCSSEECCBCGGGBCSSEEE---------EE
T ss_pred cCCCCCCCcHHHH-HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHcCceEEE---------EE
Confidence 00011 1111111 3343333211122 26778888899999999999887321211111 1222333 23
Q ss_pred ccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec--CHHHHHHHHHHHHHHHHHH
Q 047983 166 LNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV--EPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~--~~~~l~~~~~~l~~~l~~~ 229 (233)
++.+ +. +..+ ...|.++||.+.+|... .+.+|+|+.. ++++++.+++.|+++.+++
T Consensus 328 ~~~~---~~--~~~~-~~~L~~~gI~~~~g~~~--~~~iRiS~~~~~t~edId~l~~~l~~~~~~~ 385 (386)
T 3qm2_A 328 LADN---TL--DKVF-LEESFAAGLHALKGHRV--VGGMRASIYNAMPIEGVKALTDFMIDFERRH 385 (386)
T ss_dssp ESSG---GG--HHHH-HHHHHHTTEECCBCCTT--TCSEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred CCCc---cc--cHHH-HHHHHHCCCEEeCCCCC--cCeEEEEcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 4321 11 4344 44477889999887543 2459999986 7999999999999988764
No 233
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=98.36 E-value=5.6e-07 Score=78.94 Aligned_cols=110 Identities=14% Similarity=0.051 Sum_probs=67.1
Q ss_pred ChHHHHHHH--cCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCC-CCceEEEEEecCCCccccccchh
Q 047983 1 FCIEETTKK--LGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIV-PGWRLGWLVTSDPNGILQDLGVA 77 (233)
Q Consensus 1 ~~i~~l~~~--~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~-~G~R~G~~~~~~~~~~~~~~~~~ 77 (233)
++|+++|++ +|+++|+||+|+.+.++... . .++ ..++++|+||.++. .+...||+++++ +++
T Consensus 189 ~~i~~la~~~~~~~~livDea~~~~~~~~~~---~-~~g---~Di~~~S~sK~lgg~~~~~GG~v~~~~--~li------ 253 (431)
T 3ht4_A 189 KEMIAFVKEIKPDVVVFVDNCYGEFIEEQEP---C-HVG---ADLMAGSLIKNPGGGIVKTGGYIVGKE--QYV------ 253 (431)
T ss_dssp HHHHHHHHHHCTTCEEEEECTTCTTSSSCCG---G-GTT---CSEEEEETTSGGGTTTCSSCEEEEECH--HHH------
T ss_pred HHHHHHHHhhCCCCEEEEeCCChhhccCCCc---c-ccC---CeEEEcCccccCCCCCCCceEEEEecH--HHH------
Confidence 378999999 99999999999998765421 1 122 23889999998543 223339999987 444
Q ss_pred hhhhhhhHHhhhhhh---hh--ccCcchH-H-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 047983 78 FFHSISLNMRMDDYL---LL--SESVYTT-V-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIP 139 (233)
Q Consensus 78 ~~~~~~~~~~~~~~~---~~--~~~~~~~-~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 139 (233)
..+.... .. ..++... . .++.. -.......+...++++.+.+.|++++
T Consensus 254 --------~~l~~~~~~~~~g~~~~~~~~~~~~~~~~------l~~~~~~~~~~~~~a~~l~~~L~~~g 308 (431)
T 3ht4_A 254 --------EACAYRLTSPGIGAEAGASLYSLQEMYQG------FFLAPHVAGQALKGAIFTAAFLEKLG 308 (431)
T ss_dssp --------HHHHHHHSCTTTTTSCSCCCSCSHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred --------HHHHHHhccCCcccccCccHHHHHHHHhH------hhhHHHHHHHHHHHHHHHHHHHHhCc
Confidence 3332211 11 1111111 1 11111 22345566778888889999998763
No 234
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=98.34 E-value=4.1e-05 Score=67.02 Aligned_cols=196 Identities=15% Similarity=0.100 Sum_probs=126.5
Q ss_pred hHHHHHHHcCcEEEEccccC-ccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccc-------
Q 047983 2 CIEETTKKLGIMVIADEVYG-HLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQD------- 73 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~-~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~------- 73 (233)
++.++|++.|.+|++|-+|. .++-+|..+.|+.. .+ |+..|..|++ +|-|-|.|.+.+...-++.
T Consensus 222 ~~reIAd~vGA~Lm~DmAHiaGLVA~g~~psP~~~--AD---vVTtTTHKTL--rGPrGG~Il~~~~~~~~~~k~~~~~~ 294 (490)
T 3ou5_A 222 RMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKH--AD---IVTTTTHKTL--RGARSGLIFYRKGVKAVDPKTGREIP 294 (490)
T ss_dssp HHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGT--CS---EEEEESSSTT--CSCSCEEEEEECSEEEECC--CCEEE
T ss_pred HHHHHHhhcccEEEechhhhhhhhcccccCCcccc--ce---EEeccccccc--cCCCceEEEeccccccccccccchhH
Confidence 68899999999999999998 66667766666643 22 7789999975 5677799988762100000
Q ss_pred cchhhhhhhhhHHhhhhhhhh--ccCcchHH-HHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCcc
Q 047983 74 LGVAFFHSISLNMRMDDYLLL--SESVYTTV-GAVPQILEKTEEEFFSKITDILREAADICCDRLKEIPCITCPKKPEGS 150 (233)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g 150 (233)
-++. .++...... ..++.... ++.+..+......+++...+.+.+|.+.|.+.|.+. ++.........
T Consensus 295 ~~~~--------kkin~aVFPg~qggp~~h~IAAkAVaf~Ea~~p~fk~Ya~qVv~NAkaLA~~L~~~-G~~vvsGgTdn 365 (490)
T 3ou5_A 295 YTFE--------DRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLER-GYSLVSGGTDN 365 (490)
T ss_dssp CCCH--------HHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSS
T ss_pred HHHH--------HHHHhhcCccccccchHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCCCc
Confidence 0122 445444332 22222222 555554544445677888999999999999999886 44332333334
Q ss_pred EEEEEecCCCcccccccccccCCCCChHHHHHHHHhccCEEEE----CCcccC-CCCcEEEEeec------CHHHHHHHH
Q 047983 151 MFVMYCGSEDKCLLKLNYSLLEGINSDTEFALKLAKEESIIVL----PGITVG-LKDWLRITFAV------EPSAFEIGL 219 (233)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~----pg~~f~-~~~~~Rl~~~~------~~~~l~~~~ 219 (233)
-.++ +++... ++ +-..+.+.|.+.||.+. |+..-. ..+.+||.... .++++++..
T Consensus 366 HlvL-----------vDl~~~-g~--tG~~ae~~Le~agItvNkN~iP~D~sp~~~SGiRiGTpa~TtRG~~e~dm~~IA 431 (490)
T 3ou5_A 366 HLVL-----------VDLRPK-GL--DGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVV 431 (490)
T ss_dssp SEEE-----------EECGGG-TC--CHHHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHH
T ss_pred eEEE-----------Eecccc-CC--CHHHHHHHHHHcCcEECCCCCCCCCCCCCCCeeEECCHHHHhCCCCHHHHHHHH
Confidence 4555 454332 33 66778889999999985 544211 15689997652 578888888
Q ss_pred HHHHHHHH
Q 047983 220 GRMKAFYY 227 (233)
Q Consensus 220 ~~l~~~l~ 227 (233)
+.|.+++.
T Consensus 432 ~~I~~~l~ 439 (490)
T 3ou5_A 432 DFIDEGVN 439 (490)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88877664
No 235
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=98.27 E-value=2.9e-05 Score=66.44 Aligned_cols=187 Identities=13% Similarity=0.045 Sum_probs=105.7
Q ss_pred cCcEEEEccccCccccCCCccccccccCCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhhhhhhhhHHhhh
Q 047983 10 LGIMVIADEVYGHLVFGNTHFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAFFHSISLNMRMD 89 (233)
Q Consensus 10 ~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (233)
+|+++++|-+.+- +..+..+.. .+ +++.|--|.+|.+| +|++.+++ .+.+++.-. .... .-...
T Consensus 163 ~~~~~~vD~~q~~----g~~~id~~~---~d--~~~~s~~K~~gp~G--~g~l~~~~--~~~~~~~~~-~~p~--~~~~~ 226 (361)
T 3m5u_A 163 TKTPLIVDASSDF----FSRKVDFSN---IA--LFYGGVQKNAGISG--LSCIFIRK--DMLERSKNK-QIPS--MLNYL 226 (361)
T ss_dssp CSSCEEEECGGGT----TSSCCCCTT---EE--EEEEETTTTSSCTT--CEEEEEEH--HHHHHHHTC-CCCG--GGCHH
T ss_pred cCCEEEEEccccc----CCCCCCccc---CC--EEEEechhccCCCc--cEEEEEcH--HHHhhhcCC-CCCc--eeehH
Confidence 4889999988775 222223322 22 67889999998888 68888876 333211000 0000 00001
Q ss_pred hh--hhhccCcc-hHH-HHHHHHhhhcHHHH--HHHHHHHHHHHHHHHHHHhhcCCCc-ccccCCC--ccEEEEEecCCC
Q 047983 90 DY--LLLSESVY-TTV-GAVPQILEKTEEEF--FSKITDILREAADICCDRLKEIPCI-TCPKKPE--GSMFVMYCGSED 160 (233)
Q Consensus 90 ~~--~~~~~~~~-~~~-~~~~~~l~~~~~~~--~~~~~~~~~~~~~~l~~~L~~~~~~-~~~~~~~--~g~~~~~~~~~~ 160 (233)
.. .....+++ ... .++...++- ..+. ++++.++.++..+++++.|++++++ ..+..++ +...+.
T Consensus 227 ~~~~~~~~~~Tp~v~~i~~l~~al~~-l~~~gG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivs------ 299 (361)
T 3m5u_A 227 THAENQSLFNTPPTFAIYMFNLEMDW-LLNQGGLDKVHEKNSQKATMLYECIDLSNGFYKGHADKKDRSLMNVS------ 299 (361)
T ss_dssp HHHHTTTCSSCCCHHHHHHHHHHHHH-HHTTTCHHHHHHHHHHHHHHHHHHHHTSTTSEEESSCGGGBCSSEEE------
T ss_pred HHhhcCCCCCCccHHHHHHHHHHHHH-HHHccCHHHHHHHHHHHHHHHHHHHHHCCCeeeccCCHHHcCCeEEE------
Confidence 00 11111222 222 333333321 1223 6777888889999999999888755 2222221 222233
Q ss_pred cccccccccccCCCCChHHHHHHHHhccCEEEECCcccCCCCcEEEEeec--CHHHHHHHHHHHHHHHHHH
Q 047983 161 KCLLKLNYSLLEGINSDTEFALKLAKEESIIVLPGITVGLKDWLRITFAV--EPSAFEIGLGRMKAFYYRH 229 (233)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~--~~~~l~~~~~~l~~~l~~~ 229 (233)
+.++. ..++ +. .+...|.++||.+.+|..- .+.+|+|+.. +.++++.+++.|+++.+++
T Consensus 300 ---f~~~~--~~~~--~~-~~~~~L~~~gI~~~~g~~~--~g~iRiS~~~~~t~edId~l~~al~~~~~~~ 360 (361)
T 3m5u_A 300 ---FNIAK--NKDL--EP-LFVKEAEEAGMIGLKGHRI--LGGIRASIYNALNLDQVKTLCEFMKEFQGKY 360 (361)
T ss_dssp ---EEESS--CTTH--HH-HHHHHHHHTTEECCBCCTT--TCSEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred ---EECCC--chhh--hH-HHHHHHHHCCCEEecCCCc--cCeEEEEccCCCCHHHHHHHHHHHHHHHHhc
Confidence 22331 0011 33 4456778889999887542 2569999996 7999999999999988764
No 236
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=97.97 E-value=6.3e-05 Score=66.06 Aligned_cols=201 Identities=12% Similarity=0.045 Sum_probs=98.1
Q ss_pred ChHHHHHHHcCcEEEEccccCccccCCCcccccccc--CCccCEEEEccCccccCCCCceEEEEEecCCCccccccchhh
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVFGNTHFVPMGVF--GSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDLGVAF 78 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~~~~~~~~~~~~--~~~~~~i~~~s~sK~~~~~G~R~G~~~~~~~~~~~~~~~~~~ 78 (233)
++|+++|++||+++++|++|+...... ...+-.++ ..-| .++.|..|. +..-...+++...+. +. +
T Consensus 218 ~~Ia~ia~~~gi~l~VD~A~G~~~~~~-~~l~~~a~~~~~AD--~~v~S~HK~-l~a~~~~~~l~~rd~-~~------~- 285 (450)
T 3bc8_A 218 EELAVICANYDIPHVVNNAYGLQSSKC-MHLIQQGARVGRID--AFVQSLDKN-FMVPVGGAIIAGFNE-PF------I- 285 (450)
T ss_dssp HHHHHHHHHHTCCEEEECTTTTTCHHH-HHHHHHHHHHSCCC--EEEEEHHHH-HSCCSSCEEEEESCH-HH------H-
T ss_pred HHHHHHHHHCCCeEEEECCCchhhhhh-HhHHHHHhcccCCC--EEEECCccC-CCchhccEEEEecCH-HH------H-
Confidence 378999999999999999999643211 11111222 2212 466789998 555555677776552 22 2
Q ss_pred hhhhhhHHhhhhhhhhccCcchHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHhhcCC---CcccccCCCc--cEEE
Q 047983 79 FHSISLNMRMDDYLLLSESVYTTVGAVPQILEKTEEEFFSKITDILREAADICCDRLKEIP---CITCPKKPEG--SMFV 153 (233)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~---~~~~~~~~~~--g~~~ 153 (233)
.++........+.++.......++. .+.+-+.+..+...+..+++.+.|++++ +..+...+.- ...+
T Consensus 286 -------~~~~~~~~g~~s~SpsL~l~~~l~~-~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~g~~~l~~~~~~~~~~~ 357 (450)
T 3bc8_A 286 -------QDISKMYPGRASASPSLDVLITLLS-LGCSGYRKLLKERKEMFVYLSTQLKKLAEAHNERLLQTPHNPISLAM 357 (450)
T ss_dssp -------HHHHHHSCSCBCSHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCBCCCTTCSSEEEE
T ss_pred -------HHHHHHhhcCCcccHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhhHHhcCceecCCccCCCccee
Confidence 2222221111111122233333322 2333444455555566666666665544 4433222211 1112
Q ss_pred EEecCCCcccccccccccCCCCChHHHHHHHH--hccCEEEEC--------Cccc---C------CCCcEEEEee--cCH
Q 047983 154 MYCGSEDKCLLKLNYSLLEGINSDTEFALKLA--KEESIIVLP--------GITV---G------LKDWLRITFA--VEP 212 (233)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll--~~~gi~v~p--------g~~f---~------~~~~~Rl~~~--~~~ 212 (233)
. ++.-......|..+....+. .-.|..+.+ |..| + +..++=+.++ .++
T Consensus 358 ~-----------l~~~~~~~~~D~tkl~i~~~~~g~sG~~v~~~~~~~~~~~~~l~~~gi~~E~~~~~~i~~~~sig~~~ 426 (450)
T 3bc8_A 358 T-----------LKTIDGHHDKAVTQLGSMLFTRQVSGARAVPLGNVQTVSGHTFRGFMSHADNYPCAYLNAAAAIGMKM 426 (450)
T ss_dssp E-----------CTTTSSSSSCHHHHHHHHHHHTTCCSCEEECSCCEEEETTEEEETTTTTSSCCSSCEEEEECCTTCCH
T ss_pred e-----------cccccccccCCCceeEEEecCCCCccceeeecccccchhHHHHHHcCCeeecCCCCcEEEEecCCCCH
Confidence 2 21100000112233333332 223444441 2233 2 1355544444 389
Q ss_pred HHHHHHHHHHHHHHHHHhhc
Q 047983 213 SAFEIGLGRMKAFYYRHAKK 232 (233)
Q Consensus 213 ~~l~~~~~~l~~~l~~~~~~ 232 (233)
++++..+++|+++.++++++
T Consensus 427 ~di~~l~~~L~~~~~~~~~~ 446 (450)
T 3bc8_A 427 QDVDLFIKRLDKCLNIVRKE 446 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhh
Confidence 99999999999998877654
No 237
>3bzy_B ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3c00_B 3bzl_C 3bzo_B 3bzv_B 3c03_C 3bzz_B 3bzx_B
Probab=58.04 E-value=4.1 Score=26.65 Aligned_cols=24 Identities=21% Similarity=0.149 Sum_probs=19.2
Q ss_pred ChHHHHHHHcCcEEEEccccCccc
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLV 24 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~ 24 (233)
++|.++|++||++++.|..-....
T Consensus 30 ~~I~~~A~e~~VPi~e~~~LAr~L 53 (83)
T 3bzy_B 30 LQIIKLAELYDIPVIEDIPLARSL 53 (83)
T ss_dssp HHHHHHHHHTTCCEEECHHHHHHH
T ss_pred HHHHHHHHHcCCCEEeCHHHHHHH
Confidence 368999999999999997655433
No 238
>2vt1_B Surface presentation of antigens protein SPAS; specificity switch, virulence, transmembrane, inner membrane, FLHB, YSCU, T3SS, plasmid; 2.00A {Shigella flexneri} SCOP: d.367.1.1
Probab=51.77 E-value=5.9 Score=26.49 Aligned_cols=22 Identities=14% Similarity=0.344 Sum_probs=18.2
Q ss_pred ChHHHHHHHcCcEEEEccccCc
Q 047983 1 FCIEETTKKLGIMVIADEVYGH 22 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~ 22 (233)
++|.++|+++|++|+.|..-..
T Consensus 30 ~~I~e~A~e~gVPi~e~~~LAr 51 (93)
T 2vt1_B 30 LAVRKYANEVGIPTVRDVKLAR 51 (93)
T ss_dssp HHHHHHHHHTTCCEEECHHHHH
T ss_pred HHHHHHHHHcCCCEEECHHHHH
Confidence 3689999999999999876553
No 239
>3t7y_A YOP proteins translocation protein U; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta; 2.10A {Chlamydia trachomatis} SCOP: d.367.1.0
Probab=50.83 E-value=5.9 Score=26.71 Aligned_cols=22 Identities=18% Similarity=0.274 Sum_probs=18.5
Q ss_pred ChHHHHHHHcCcEEEEccccCc
Q 047983 1 FCIEETTKKLGIMVIADEVYGH 22 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~ 22 (233)
++|.++|++||++++.|..-..
T Consensus 45 ~~I~~~A~e~gVPi~e~~~LAr 66 (97)
T 3t7y_A 45 KRIIAEAEKYGVPIMRNVPLAH 66 (97)
T ss_dssp HHHHHHHHHHTCCEEECHHHHH
T ss_pred HHHHHHHHHcCCeEEECHHHHH
Confidence 3689999999999999987553
No 240
>3c01_E Surface presentation of antigens protein SPAS; auto cleavage protein, flagella, ESCU, YSCU, intein, T3SS, M inner membrane, transmembrane; 2.60A {Salmonella typhimurium} SCOP: d.367.1.1
Probab=49.59 E-value=6.4 Score=26.61 Aligned_cols=21 Identities=24% Similarity=0.400 Sum_probs=17.3
Q ss_pred hHHHHHHHcCcEEEEccccCc
Q 047983 2 CIEETTKKLGIMVIADEVYGH 22 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~ 22 (233)
+|.++|+++|++|+.|..-..
T Consensus 31 ~I~e~A~e~gVPi~e~~~LAr 51 (98)
T 3c01_E 31 AVRAYAEKVGVPVIVDIKLAR 51 (98)
T ss_dssp HHHHHHHHHTCCEEECHHHHH
T ss_pred HHHHHHHHcCCCeecCHHHHH
Confidence 688999999999999876553
No 241
>2a1v_A Conserved hypothetical protein; structural genomics, PSI, protein structure initiative; 2.15A {Deinococcus radiodurans} SCOP: d.198.3.1
Probab=48.37 E-value=72 Score=22.79 Aligned_cols=51 Identities=18% Similarity=0.223 Sum_probs=34.7
Q ss_pred hHHHHHHHHhccCEEEECCcccCCCCcEEEEeec--CHHHHHHHHHHHHHHHH
Q 047983 177 DTEFALKLAKEESIIVLPGITVGLKDWLRITFAV--EPSAFEIGLGRMKAFYY 227 (233)
Q Consensus 177 ~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~--~~~~l~~~~~~l~~~l~ 227 (233)
+.+....+.+..+=.+.||..+...+|+.+.+.. +.+++.+.++.=-+.+.
T Consensus 64 ~pe~~~~L~~~~~~~i~PayhmnK~hWvsV~Ld~~v~~~el~elI~~Sy~Lv~ 116 (144)
T 2a1v_A 64 DPERGEELRQAHPQSIAPGYHLNKKHWVTVTLDGTVPAELLGELLRGSYLLVT 116 (144)
T ss_dssp CHHHHHHHHHHSTTTEEECTTSCTTTEEEEECSSSSCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHhcCCCeEecCCccCCCeEEEEEcCCCCCHHHHHHHHHHHHHHHH
Confidence 3445555666665113688888888999999873 78888888776655554
No 242
>3b1s_B Flagellar biosynthetic protein FLHB; type III secretion system, protein transport, MEMB protein; 2.55A {Aquifex aeolicus}
Probab=51.05 E-value=4.5 Score=26.73 Aligned_cols=25 Identities=16% Similarity=0.203 Sum_probs=20.6
Q ss_pred ChHHHHHHHcCcEEEEccccCcccc
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVF 25 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~ 25 (233)
++|.++|++||++++.|..-....+
T Consensus 30 ~~I~e~A~e~~VPi~e~~~LAr~Ly 54 (87)
T 3b1s_B 30 QKIVEIAENYSIPVVRKPELARALY 54 (87)
Confidence 4689999999999999987765544
No 243
>2jli_A YSCU, YOP proteins translocation protein; cell membrane, transmembrane, protein transport, type III secretion system, plasmid, membrane; 1.13A {Yersinia pestis}
Probab=36.33 E-value=13 Score=26.13 Aligned_cols=24 Identities=4% Similarity=0.263 Sum_probs=19.3
Q ss_pred hHHHHHHHcCcEEEEccccCcccc
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVF 25 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~ 25 (233)
+|.++|++||++++.|..-....+
T Consensus 75 ~I~~~A~e~~VPi~e~~~LAr~Ly 98 (123)
T 2jli_A 75 TVRKIAEEEGVPILQRIPLARALY 98 (123)
T ss_dssp HHHHHHHHHTCCEEECHHHHHHHH
T ss_pred HHHHHHHHcCCCEEeCHHHHHHHH
Confidence 689999999999999976554333
No 244
>3bzs_A ESCU; auto cleavage protein, intein, T3SS, TTSS, asparagine cycliz membrane, membrane protein, protein transport; 1.48A {Escherichia coli} PDB: 3bzr_A 3bzp_A 3bzt_A 3c03_A
Probab=35.56 E-value=14 Score=26.58 Aligned_cols=24 Identities=21% Similarity=0.192 Sum_probs=19.4
Q ss_pred hHHHHHHHcCcEEEEccccCcccc
Q 047983 2 CIEETTKKLGIMVIADEVYGHLVF 25 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~~ 25 (233)
+|.++|++||++|+.|..-....+
T Consensus 85 ~I~e~A~e~gVPi~e~~~LAr~Ly 108 (137)
T 3bzs_A 85 QIIKLAELYDIPVIEDIPLARSLY 108 (137)
T ss_dssp HHHHHHHHHTCCEEECHHHHHHHH
T ss_pred HHHHHHHHcCCCEEeCHHHHHHHH
Confidence 689999999999999986654333
No 245
>3b0z_B Flagellar biosynthetic protein FLHB; type III secretion system, protein transport, MEMB protein; 2.45A {Salmonella enterica subsp}
Probab=41.70 E-value=7.9 Score=26.94 Aligned_cols=25 Identities=8% Similarity=0.158 Sum_probs=20.7
Q ss_pred ChHHHHHHHcCcEEEEccccCcccc
Q 047983 1 FCIEETTKKLGIMVIADEVYGHLVF 25 (233)
Q Consensus 1 ~~i~~l~~~~~~~lI~De~y~~~~~ 25 (233)
++|.++|++||++|+.|..-....|
T Consensus 30 ~~I~e~A~e~gVPi~e~~~LAr~Ly 54 (114)
T 3b0z_B 30 LRIREIGAEHRVPTLEAPPLARALY 54 (114)
Confidence 4689999999999999987775544
No 246
>2jlj_A YSCU, YOP proteins translocation protein U; cell membrane, transmembrane, yersinia pesits, protein trans type III secretion system, membrane; 1.3A {Yersinia pestis} PDB: 2jlh_A* 2v5g_A 2w0r_A
Probab=33.89 E-value=15 Score=26.60 Aligned_cols=23 Identities=4% Similarity=0.200 Sum_probs=18.6
Q ss_pred hHHHHHHHcCcEEEEccccCccc
Q 047983 2 CIEETTKKLGIMVIADEVYGHLV 24 (233)
Q Consensus 2 ~i~~l~~~~~~~lI~De~y~~~~ 24 (233)
+|.++|++||++|+.|..-....
T Consensus 84 ~I~e~A~e~gVPi~e~~~LAr~L 106 (144)
T 2jlj_A 84 TVRKIAEEEGVPILQRIPLARAL 106 (144)
T ss_dssp HHHHHHHHHTCCEEECHHHHHHH
T ss_pred HHHHHHHHcCCCEEeCHHHHHHH
Confidence 68899999999999997655433
No 247
>2fki_A Protein YJBR; NESG, GFT-alpha-beta, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium; NMR {Escherichia coli} SCOP: d.198.3.1
Probab=30.95 E-value=1.3e+02 Score=20.72 Aligned_cols=50 Identities=16% Similarity=0.088 Sum_probs=34.5
Q ss_pred hHHHHHHHHhccCEEEECCcccCCCCcEEEEeec--CHHHHHHHHHHHHHHHH
Q 047983 177 DTEFALKLAKEESIIVLPGITVGLKDWLRITFAV--EPSAFEIGLGRMKAFYY 227 (233)
Q Consensus 177 ~~~~~~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~--~~~~l~~~~~~l~~~l~ 227 (233)
+.+....+.+..+= +.||..++..+|+.+.+.. +.+++.+.++.=-+.+.
T Consensus 53 ~pe~~~~L~~~~~~-i~PayhmnK~hWisv~ld~~v~~~~l~~lI~~Sy~lv~ 104 (126)
T 2fki_A 53 SPELAELLRQQHSD-VRPSRHLNKAHWSTVYLDGSLPDSQIYYLVDASYQQAV 104 (126)
T ss_dssp CHHHHHHHHHSCST-TCCCCSSCTTTEEEEECTTTSCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHhhCCC-eecCCcCCCceeEEEEcCCCCCHHHHHHHHHHHHHHHH
Confidence 44555666666651 3688888888999999963 77788887766555543
No 248
>2kfp_A Pspto_3016 protein; alpha, beta, double-WING, structural genomics, PSI-2, protein structure initiative; NMR {Pseudomonas syringae} PDB: 3h9x_A
Probab=24.34 E-value=73 Score=22.09 Aligned_cols=40 Identities=10% Similarity=0.201 Sum_probs=28.0
Q ss_pred HHHHhccCEEEECCcccCCCCcEEEEeec--CHHHHHHHHHHHH
Q 047983 182 LKLAKEESIIVLPGITVGLKDWLRITFAV--EPSAFEIGLGRMK 223 (233)
Q Consensus 182 ~~ll~~~gi~v~pg~~f~~~~~~Rl~~~~--~~~~l~~~~~~l~ 223 (233)
..+.++.| +.||..++-.+|+.+.+.. +.+++.+.++.=-
T Consensus 72 ~~Lr~~~~--i~PayhmnK~hWisv~Ld~~v~d~~i~~lI~~Sy 113 (125)
T 2kfp_A 72 GSLRKKPG--IYPAYHMNKEHWITVLLNGPLGAKEIHSLIEDSF 113 (125)
T ss_dssp HHHHHSTT--EEECSSSCSSSEEEEETTTTCCHHHHHHHHHHHH
T ss_pred HHHHhCCC--CCccccCCCCCeEEEEcCCCCCHHHHHHHHHHHH
Confidence 33444567 6688888889999999973 6777776665443
Done!