Query 047987
Match_columns 153
No_of_seqs 35 out of 37
Neff 2.3
Searched_HMMs 29240
Date Mon Mar 25 08:35:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047987.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047987hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1h2i_A RAD52, DNA repair prote 96.1 0.029 9.9E-07 45.8 8.6 84 62-149 34-128 (209)
2 3zzx_A Thioredoxin; oxidoreduc 73.9 0.22 7.6E-06 33.5 -2.4 15 101-116 24-38 (105)
3 1sh8_A Hypothetical protein PA 67.9 5.6 0.00019 27.5 3.7 47 102-150 87-146 (154)
4 1ilo_A Conserved hypothetical 66.2 0.72 2.4E-05 27.5 -1.1 14 102-116 4-17 (77)
5 2djj_A PDI, protein disulfide- 63.9 0.76 2.6E-05 29.5 -1.3 15 101-116 29-43 (121)
6 3f9u_A Putative exported cytoc 63.8 0.7 2.4E-05 32.1 -1.6 15 101-116 51-65 (172)
7 3qou_A Protein YBBN; thioredox 61.4 1 3.4E-05 33.8 -1.3 15 101-116 30-44 (287)
8 3h79_A Thioredoxin-like protei 61.0 0.82 2.8E-05 30.2 -1.6 15 101-116 37-51 (127)
9 3ebw_A PER A 4 allergen; beta 60.9 5.9 0.0002 28.7 2.8 51 94-150 21-73 (163)
10 1sc0_A Hypothetical protein HI 57.8 9.7 0.00033 27.1 3.5 47 102-149 87-134 (138)
11 2lst_A Thioredoxin; structural 61.9 2.2 7.6E-05 27.8 0.0 16 101-117 23-38 (130)
12 3kp8_A Vkorc1/thioredoxin doma 56.0 1.2 4E-05 30.1 -1.6 14 101-115 16-29 (106)
13 3d6i_A Monothiol glutaredoxin- 54.7 1.7 5.8E-05 27.6 -0.9 15 101-116 25-39 (112)
14 3ako_A Venus; fluorescent prot 54.6 20 0.00069 28.6 5.1 28 106-135 107-135 (173)
15 3qfa_C Thioredoxin; protein-pr 54.5 1.2 4.2E-05 29.2 -1.6 14 101-115 35-48 (116)
16 4euy_A Uncharacterized protein 54.3 1.2 4E-05 28.3 -1.7 14 101-115 22-35 (105)
17 3e8p_A Uncharacterized protein 53.3 23 0.0008 25.4 4.9 47 102-149 115-162 (164)
18 2dj3_A Protein disulfide-isome 52.8 1.5 5.2E-05 28.7 -1.4 15 101-116 29-43 (133)
19 1o73_A Tryparedoxin; electron 52.1 3 0.0001 27.4 -0.0 42 70-115 3-45 (144)
20 2dj0_A Thioredoxin-related tra 51.7 1.9 6.4E-05 28.9 -1.1 15 101-116 30-44 (137)
21 3gix_A Thioredoxin-like protei 51.5 1.5 5E-05 30.8 -1.7 14 101-115 27-40 (149)
22 1o0i_A Hypothetical protein HI 51.4 14 0.00048 25.3 3.3 46 102-149 87-134 (138)
23 2qsi_A Putative hydrogenase ex 50.9 1.2 4.1E-05 33.1 -2.3 16 100-116 36-53 (137)
24 1gh2_A Thioredoxin-like protei 50.2 1.6 5.6E-05 27.5 -1.5 14 101-115 25-38 (107)
25 4exr_A Putative lipoprotein; Y 50.1 35 0.0012 25.8 5.7 69 51-146 21-92 (174)
26 3gnj_A Thioredoxin domain prot 49.8 1.7 5.7E-05 27.2 -1.5 14 101-115 26-39 (111)
27 1sji_A Calsequestrin 2, calseq 49.6 2.8 9.6E-05 32.9 -0.5 13 101-115 32-44 (350)
28 3f3q_A Thioredoxin-1; His TAG, 48.8 1.7 5.8E-05 28.1 -1.6 14 101-115 28-41 (109)
29 1zma_A Bacterocin transport ac 48.6 1.7 5.9E-05 28.1 -1.6 14 101-115 33-46 (118)
30 1z6n_A Hypothetical protein PA 48.5 1.9 6.5E-05 31.7 -1.6 16 100-116 57-72 (167)
31 3ul3_B Thioredoxin, thioredoxi 48.5 1.7 6E-05 28.7 -1.6 16 100-116 45-60 (128)
32 2dbc_A PDCL2, unnamed protein 48.3 1.8 6.3E-05 29.5 -1.6 14 101-115 34-47 (135)
33 1x5e_A Thioredoxin domain cont 47.1 2 6.8E-05 28.0 -1.5 14 101-115 26-39 (126)
34 3uem_A Protein disulfide-isome 47.0 2.1 7.2E-05 33.2 -1.6 15 100-115 270-284 (361)
35 2dml_A Protein disulfide-isome 46.9 2 6.9E-05 27.9 -1.5 15 101-116 39-53 (130)
36 1mek_A Protein disulfide isome 46.0 2.7 9.3E-05 26.3 -0.9 15 101-116 28-42 (120)
37 3hxs_A Thioredoxin, TRXP; elec 44.7 2.3 8E-05 28.1 -1.5 15 101-116 55-69 (141)
38 2zmu_A Fluorescent protein; GF 44.7 22 0.00076 29.2 4.0 26 108-135 86-111 (223)
39 3idv_A Protein disulfide-isome 44.2 2.3 8E-05 30.4 -1.6 15 101-116 36-50 (241)
40 3f8u_A Protein disulfide-isome 44.0 2.6 8.9E-05 34.1 -1.6 16 100-116 373-388 (481)
41 1i5g_A Tryparedoxin II; electr 44.0 2.9 0.0001 27.6 -1.1 42 71-115 3-45 (144)
42 3lor_A Thiol-disulfide isomera 43.9 2.3 7.8E-05 28.3 -1.6 15 100-115 33-47 (160)
43 3emx_A Thioredoxin; structural 43.8 2.1 7.3E-05 28.8 -1.8 15 101-116 35-49 (135)
44 3dml_A Putative uncharacterize 43.2 2.5 8.5E-05 30.4 -1.6 17 99-116 20-36 (116)
45 3hdu_A Putative thioesterase; 43.2 37 0.0013 23.9 4.6 45 102-148 108-154 (157)
46 3q6o_A Sulfhydryl oxidase 1; p 42.7 2.6 8.9E-05 31.1 -1.6 15 101-116 34-48 (244)
47 3ed3_A Protein disulfide-isome 42.6 2.7 9.3E-05 33.1 -1.6 14 101-115 39-52 (298)
48 1x5d_A Protein disulfide-isome 42.6 2.4 8.3E-05 27.4 -1.6 14 101-115 29-42 (133)
49 3uvt_A Thioredoxin domain-cont 42.3 2.5 8.7E-05 26.3 -1.5 14 101-115 25-38 (111)
50 3cxg_A Putative thioredoxin; m 42.2 2.6 8.7E-05 28.6 -1.6 14 101-115 44-57 (133)
51 3aps_A DNAJ homolog subfamily 41.7 2.5 8.7E-05 27.1 -1.6 14 101-115 25-38 (122)
52 2xc2_A Thioredoxinn; oxidoredu 41.6 2.5 8.7E-05 27.1 -1.6 13 101-114 37-49 (117)
53 2dj1_A Protein disulfide-isome 41.5 2.7 9.1E-05 27.7 -1.6 15 101-116 38-52 (140)
54 1qgv_A Spliceosomal protein U5 41.2 2.6 9E-05 29.2 -1.7 14 101-115 27-40 (142)
55 2l6c_A Thioredoxin; oxidoreduc 40.9 3.2 0.00011 26.8 -1.2 14 101-115 23-36 (110)
56 3die_A Thioredoxin, TRX; elect 40.6 2.9 0.0001 25.7 -1.4 14 101-115 23-36 (106)
57 2r2j_A Thioredoxin domain-cont 40.3 3.1 0.00011 33.2 -1.6 15 101-116 26-40 (382)
58 2voc_A Thioredoxin; electron t 40.2 4 0.00014 26.2 -0.9 15 100-115 20-34 (112)
59 1n9l_A PHOT-LOV1, putative blu 40.0 63 0.0022 19.8 5.0 31 109-141 67-98 (109)
60 3fk8_A Disulphide isomerase; A 39.9 2.8 9.7E-05 27.5 -1.6 14 101-115 33-46 (133)
61 3hz4_A Thioredoxin; NYSGXRC, P 39.9 2.9 9.9E-05 28.2 -1.6 14 101-115 28-41 (140)
62 2vlu_A Thioredoxin, thioredoxi 39.8 2.8 9.6E-05 26.9 -1.6 14 101-115 38-51 (122)
63 3tco_A Thioredoxin (TRXA-1); d 39.6 2.8 9.5E-05 25.9 -1.6 14 101-115 25-38 (109)
64 4aow_A Guanine nucleotide-bind 39.4 32 0.0011 24.3 3.7 34 108-147 304-339 (340)
65 2wz9_A Glutaredoxin-3; protein 39.0 3.1 0.00011 28.6 -1.6 14 101-115 36-49 (153)
66 1vh5_A Hypothetical protein YD 38.5 29 0.00098 24.1 3.3 47 102-149 89-136 (148)
67 1faa_A Thioredoxin F; electron 38.0 3.1 0.00011 26.9 -1.6 14 101-115 41-54 (124)
68 2nwi_A Hypothetical protein; s 37.7 61 0.0021 22.4 5.0 61 62-134 96-157 (172)
69 3d22_A TRXH4, thioredoxin H-ty 37.5 3.3 0.00011 27.4 -1.6 13 101-114 50-62 (139)
70 3e29_A Uncharacterized protein 37.1 32 0.0011 23.8 3.4 47 102-149 85-132 (144)
71 3f5o_A Thioesterase superfamil 36.5 39 0.0013 23.1 3.7 48 102-151 88-139 (148)
72 2b5e_A Protein disulfide-isome 36.4 3.9 0.00014 33.5 -1.6 16 100-116 379-394 (504)
73 3s4k_A Putative esterase RV184 36.2 44 0.0015 23.1 4.0 47 102-150 91-139 (144)
74 3dxb_A Thioredoxin N-terminall 36.0 3.8 0.00013 30.1 -1.6 14 101-115 34-47 (222)
75 1r26_A Thioredoxin; redox-acti 36.0 3.6 0.00012 27.7 -1.6 14 101-115 41-54 (125)
76 3m9j_A Thioredoxin; oxidoreduc 36.0 3.4 0.00012 25.5 -1.6 13 101-114 24-36 (105)
77 1ep7_A Thioredoxin CH1, H-type 35.6 3.6 0.00012 25.8 -1.6 14 101-115 28-41 (112)
78 1wmj_A Thioredoxin H-type; str 35.4 5.7 0.00019 25.5 -0.7 15 101-116 40-54 (130)
79 2l5l_A Thioredoxin; structural 35.3 3.6 0.00012 27.5 -1.7 14 101-115 42-55 (136)
80 4h5i_A Guanine nucleotide-exch 35.1 24 0.00083 26.9 2.7 18 108-125 174-191 (365)
81 3dkz_A Thioesterase superfamil 35.0 38 0.0013 23.3 3.5 47 102-150 81-128 (142)
82 1vh9_A P15, hypothetical prote 34.8 35 0.0012 23.8 3.3 46 102-149 89-136 (149)
83 1nsw_A Thioredoxin, TRX; therm 34.8 3.7 0.00013 25.4 -1.6 14 101-115 21-34 (105)
84 3gek_A Putative thioesterase Y 34.5 40 0.0014 24.3 3.7 48 102-150 81-130 (146)
85 1wou_A Thioredoxin -related pr 34.4 4.4 0.00015 26.8 -1.4 16 101-116 28-49 (123)
86 1yoc_A Hypothetical protein PA 33.8 69 0.0024 22.3 4.7 46 102-150 95-144 (147)
87 2l57_A Uncharacterized protein 33.7 4.3 0.00015 26.4 -1.5 15 100-115 29-43 (126)
88 1syr_A Thioredoxin; SGPP, stru 33.3 4.1 0.00014 26.0 -1.6 14 101-115 30-43 (112)
89 2hpw_A Green fluorescent prote 33.3 42 0.0014 27.6 4.0 28 106-135 87-115 (233)
90 2trx_A Thioredoxin; electron t 33.2 4.1 0.00014 25.4 -1.6 14 101-115 24-37 (108)
91 1t00_A Thioredoxin, TRX; redox 32.9 4.2 0.00014 25.6 -1.6 14 101-115 27-40 (112)
92 1xmz_A ASCP595, GFP-like chrom 32.5 46 0.0016 27.5 4.1 28 106-135 93-121 (241)
93 2ib5_A Chromo protein, cjblue; 32.4 47 0.0016 27.3 4.1 28 106-135 85-113 (233)
94 2gw3_A Kaede; beta barrel, lum 32.2 48 0.0017 27.1 4.2 28 106-135 83-111 (225)
95 1a0r_P Phosducin, MEKA, PP33; 32.1 5.2 0.00018 31.6 -1.6 14 101-115 137-150 (245)
96 2oe3_A Thioredoxin-3; electron 31.8 4.6 0.00016 26.5 -1.6 14 101-115 34-47 (114)
97 2gj3_A Nitrogen fixation regul 31.8 89 0.003 19.0 5.0 32 108-141 75-107 (120)
98 3apq_A DNAJ homolog subfamily 31.7 4.9 0.00017 29.0 -1.6 15 101-116 118-132 (210)
99 2hls_A Protein disulfide oxido 31.6 4.7 0.00016 30.6 -1.8 16 100-116 141-156 (243)
100 2kuc_A Putative disulphide-iso 31.3 5 0.00017 26.0 -1.5 13 101-114 31-43 (130)
101 2lfw_B NEPR anti sigma factor; 31.0 74 0.0025 21.7 4.3 45 38-82 6-51 (62)
102 2c9i_A Green fluorescent prote 31.0 48 0.0016 27.1 4.0 28 106-135 82-110 (226)
103 1yzw_A Hcred, GFP-like non-flu 31.0 48 0.0016 27.2 3.9 28 106-135 82-110 (225)
104 2hbo_A Hypothetical protein (N 31.0 49 0.0017 23.0 3.5 45 102-149 93-140 (158)
105 2o8v_B Thioredoxin 1; disulfid 30.7 5.3 0.00018 26.8 -1.5 14 101-115 44-57 (128)
106 2c9j_A Green fluorescent prote 30.7 53 0.0018 26.8 4.2 28 106-135 81-109 (223)
107 2g6y_A Green fluorescent prote 30.6 48 0.0017 26.9 3.9 27 107-135 78-105 (217)
108 1xfl_A Thioredoxin H1; AT3G510 30.6 5 0.00017 26.7 -1.6 14 101-115 42-55 (124)
109 2f51_A Thioredoxin; electron t 30.2 5.1 0.00017 26.3 -1.6 14 101-115 27-40 (118)
110 3f1t_A Uncharacterized protein 30.2 56 0.0019 23.0 3.8 47 102-150 88-138 (148)
111 3us3_A Calsequestrin-1; calciu 30.0 9.5 0.00032 30.5 -0.4 12 101-113 34-45 (367)
112 3lbe_A Putative uncharacterize 29.9 42 0.0014 24.3 3.1 46 102-149 107-155 (163)
113 2a46_A GFP-like fluorescent ch 29.7 56 0.0019 27.0 4.2 28 106-135 98-126 (238)
114 2fs2_A Phenylacetic acid degra 29.5 46 0.0016 23.1 3.2 46 102-149 83-131 (151)
115 4i82_A Putative uncharacterize 29.1 48 0.0017 22.4 3.2 46 102-149 76-124 (137)
116 2p8g_A PAD, phenolic acid deca 29.1 36 0.0012 27.1 2.8 21 105-131 14-34 (162)
117 1ti3_A Thioredoxin H, PTTRXH1; 29.0 5.6 0.00019 24.8 -1.5 14 101-115 30-43 (113)
118 1z24_A Insecticyanin A form; b 28.9 67 0.0023 23.1 4.1 49 94-150 26-76 (189)
119 2pbc_A FK506-binding protein 2 28.9 52 0.0018 21.4 3.2 24 120-145 7-30 (102)
120 1xwb_A Thioredoxin; dimerizati 28.8 5.3 0.00018 24.5 -1.6 13 101-114 24-36 (106)
121 2dd7_A Green fluorescent prote 28.8 49 0.0017 26.9 3.6 27 107-135 75-102 (216)
122 1o8x_A Tryparedoxin, TRYX, TXN 28.8 7.7 0.00026 25.7 -0.9 42 70-115 3-45 (146)
123 2hqk_A CYAN fluorescent chromo 28.7 56 0.0019 26.6 4.0 28 106-135 80-108 (219)
124 2rh7_A Green fluorescent prote 28.6 54 0.0019 27.1 3.9 28 106-135 85-113 (239)
125 3cgl_A GFP-like fluorescent ch 28.6 55 0.0019 27.1 4.0 28 106-135 96-124 (241)
126 2yj7_A LPBCA thioredoxin; oxid 34.7 12 0.00041 22.6 0.0 16 100-116 22-37 (106)
127 1rwu_A Hypothetical UPF0250 pr 28.0 29 0.00099 25.1 1.9 37 98-137 53-90 (109)
128 2vm1_A Thioredoxin, thioredoxi 28.0 5.7 0.0002 25.0 -1.6 13 101-114 32-44 (118)
129 3nx2_A Ferulic acid decarboxyl 27.7 39 0.0013 27.0 2.8 21 105-131 21-41 (168)
130 1w4v_A Thioredoxin, mitochondr 27.6 6 0.00021 25.7 -1.6 14 101-115 35-48 (119)
131 1oaz_A Thioredoxin 1; immune s 27.5 10 0.00036 25.2 -0.5 10 101-111 25-34 (123)
132 2yzu_A Thioredoxin; redox prot 27.4 5.8 0.0002 24.3 -1.6 13 101-114 22-34 (109)
133 1a8l_A Protein disulfide oxido 27.0 7.7 0.00026 27.6 -1.2 15 101-115 26-40 (226)
134 1q4t_A Thioesterase; hot-DOG, 27.0 58 0.002 22.4 3.3 47 102-149 98-145 (151)
135 2j23_A Thioredoxin; immune pro 26.7 7.2 0.00025 25.5 -1.4 14 101-115 37-50 (121)
136 2ls5_A Uncharacterized protein 32.7 14 0.00046 24.7 0.0 15 100-115 36-50 (159)
137 1t82_A Hypothetical acetyltran 26.7 1E+02 0.0036 21.8 4.7 27 122-150 125-151 (155)
138 2i1u_A Thioredoxin, TRX, MPT46 26.7 6.3 0.00021 25.0 -1.6 14 101-115 34-47 (121)
139 2ppt_A Thioredoxin-2; thiredox 26.5 6.7 0.00023 27.4 -1.6 14 101-115 68-81 (155)
140 2ymu_A WD-40 repeat protein; u 26.5 54 0.0018 25.5 3.3 18 108-125 14-31 (577)
141 4ayb_H DNA-directed RNA polyme 26.4 70 0.0024 22.3 3.6 26 110-135 59-84 (84)
142 3tbm_A Putative uncharacterize 26.1 40 0.0014 23.0 2.3 35 114-149 8-42 (69)
143 2b5x_A YKUV protein, TRXY; thi 25.9 7.7 0.00026 24.9 -1.3 14 100-114 32-45 (148)
144 2qgv_A Hydrogenase-1 operon pr 25.7 6.4 0.00022 29.3 -1.9 17 100-116 37-54 (140)
145 2o9u_X Monellin chain B and mo 25.7 84 0.0029 22.6 4.1 24 115-138 45-70 (97)
146 2lrt_A Uncharacterized protein 25.6 7 0.00024 26.6 -1.6 15 100-115 38-52 (152)
147 3kz7_A FK506-binding protein 3 25.6 60 0.002 21.7 3.1 23 121-145 22-44 (119)
148 2e0q_A Thioredoxin; electron t 25.6 6.5 0.00022 23.7 -1.6 13 101-114 20-32 (104)
149 2h4u_A Thioesterase superfamil 25.3 1.1E+02 0.0037 20.9 4.5 47 102-149 93-142 (145)
150 2i4a_A Thioredoxin; acidophIle 25.3 6.7 0.00023 24.1 -1.6 14 101-115 24-37 (107)
151 3raz_A Thioredoxin-related pro 25.2 7.1 0.00024 26.0 -1.6 14 101-115 28-41 (151)
152 2lus_A Thioredoxion; CR-Trp16, 31.0 15 0.00052 23.7 0.0 15 101-116 30-44 (143)
153 1dby_A Chloroplast thioredoxin 25.1 6.9 0.00023 24.2 -1.6 13 101-114 23-35 (107)
154 1v98_A Thioredoxin; oxidoreduc 25.1 7.2 0.00025 25.9 -1.6 14 101-115 54-67 (140)
155 2c0g_A ERP29 homolog, windbeut 24.9 12 0.00041 29.6 -0.6 10 101-111 37-48 (248)
156 1ixl_A Hypothetical protein PH 24.6 99 0.0034 20.4 4.0 42 102-146 75-119 (131)
157 3p2a_A Thioredoxin 2, putative 24.5 8 0.00027 26.0 -1.5 14 101-115 59-72 (148)
158 3ewl_A Uncharacterized conserv 24.4 8.1 0.00028 25.2 -1.5 16 100-116 30-45 (142)
159 3f7x_A Putative polyketide cyc 24.2 1.5E+02 0.005 20.4 5.0 24 109-132 76-101 (151)
160 1zki_A Hypothetical protein PA 24.2 1.2E+02 0.0042 19.8 4.4 44 102-148 83-128 (133)
161 1hxv_A Trigger factor; FKBP fo 23.7 57 0.002 22.6 2.8 22 120-144 31-52 (113)
162 1yat_A FK506 binding protein; 23.6 90 0.0031 20.7 3.7 24 120-145 23-46 (113)
163 3hcz_A Possible thiol-disulfid 23.4 16 0.00056 23.4 -0.1 14 101-115 35-48 (148)
164 3kh7_A Thiol:disulfide interch 23.3 13 0.00045 26.0 -0.6 44 71-115 32-75 (176)
165 2pim_A Phenylacetic acid degra 23.1 88 0.003 20.9 3.6 46 102-149 90-136 (141)
166 2b1k_A Thiol:disulfide interch 22.8 8.6 0.00029 26.0 -1.6 14 100-114 54-67 (168)
167 3i0y_A Putative polyketide cyc 22.6 1.6E+02 0.0055 18.9 5.0 11 120-130 77-87 (140)
168 2ymu_A WD-40 repeat protein; u 22.1 1E+02 0.0035 24.0 4.1 37 110-146 467-506 (577)
169 3ia1_A THIO-disulfide isomeras 22.1 11 0.00037 24.9 -1.2 14 100-114 33-46 (154)
170 3ph9_A Anterior gradient prote 21.9 9.6 0.00033 27.7 -1.6 14 101-115 48-61 (151)
171 3nqz_A MCP-02, secreted metall 21.9 1.2E+02 0.0041 22.5 4.4 29 113-142 130-159 (180)
172 3bb9_A Putative orphan protein 21.8 1.9E+02 0.0064 19.4 5.9 33 107-139 87-120 (148)
173 3c5o_A UPF0311 protein RPA1785 21.8 1.6E+02 0.0054 21.7 5.0 46 104-150 43-94 (157)
174 4ae7_A Thioesterase superfamil 21.7 1.1E+02 0.0039 24.2 4.5 45 102-148 161-209 (220)
175 1qwd_A Outer membrane lipoprot 21.4 1.2E+02 0.0041 22.1 4.2 52 94-150 42-95 (177)
176 1zzo_A RV1677; thioredoxin fol 21.3 9.1 0.00031 24.1 -1.6 14 100-114 28-41 (136)
177 2pu9_C TRX-F, thioredoxin F-ty 21.2 9.2 0.00031 24.1 -1.6 14 101-115 28-41 (111)
178 2ojh_A Uncharacterized protein 21.1 76 0.0026 21.3 2.9 16 110-125 41-56 (297)
179 2vim_A Thioredoxin, TRX; thior 20.9 9.3 0.00032 23.3 -1.6 13 101-114 23-35 (104)
180 4ggc_A P55CDC, cell division c 20.6 72 0.0024 22.2 2.8 25 110-140 284-308 (318)
181 2jad_A Yellow fluorescent prot 20.2 1.1E+02 0.0037 26.1 4.3 28 106-135 86-114 (362)
182 4ae8_A Thioesterase superfamil 20.1 1.5E+02 0.0051 22.8 4.7 45 102-148 153-201 (211)
No 1
>1h2i_A RAD52, DNA repair protein RAD52 homolog; DNA-binding protein, DNA recombination; HET: DNA; 2.7A {Homo sapiens} SCOP: d.50.1.3 PDB: 1kn0_A
Probab=96.07 E-value=0.029 Score=45.76 Aligned_cols=84 Identities=23% Similarity=0.311 Sum_probs=63.5
Q ss_pred hhHHHHHHHhcccCCcccccccccC-Cccccccchhhhhhhhh--hccCceeeeeeeEEE--e--eCCcEEEE----EEE
Q 047987 62 RPLSEILKELNKNVPNSLIKIRVED-GFSMKYIPWHIVNRIMN--LHAPEWSGEVRNITY--S--VDGKTVSV----VYR 130 (153)
Q Consensus 62 RPLaEILrdLnKrVPD~lvktr~~~-g~s~~yIPWy~anRiL~--fyAPgW~gEVR~i~y--s--~dGksVsV----vyR 130 (153)
+-.+.|=+-|++++|...|++|... |..+.||+.+.+....| |--.||+-+|.++.. - .+|+ .+| +.|
T Consensus 34 ee~~~iq~~L~~~lgpe~is~R~g~gg~kv~YIeg~kvI~lANeiFGFNGWSs~I~~~~vd~~d~~~gk-~~v~~~aiVR 112 (209)
T 1h2i_A 34 EEYQAIQKALRQRLGPEYISSRMAGGGQKVCYIEGHRVINLANEMFGYNGWAHSITQQNVDFVDLNNGK-FYVGVCAFVR 112 (209)
T ss_dssp HHHHHHHHHHHCCBCTTTEEEEECTTSCEEEEECHHHHHHHHHHHHCTTTEEEEEEEEEEEEEEESSSS-EEEEEEEEEE
T ss_pred HHHHHHHHHHhcccCchhheeccCCCCceEEEeeHHHHHHHHHhccCCCCCeeEEEEeeceeEeccCCe-EEEEEEEEEE
Confidence 4467788999999999999999874 67789999999888887 677899999987643 1 2343 433 344
Q ss_pred EEEEecccceeeeccceec
Q 047987 131 VTIYGTDAEVTSNSVNILL 149 (153)
Q Consensus 131 VTi~GtDge~~REATGT~~ 149 (153)
||| .||. +||..|...
T Consensus 113 VtL--kDGt-~~EdiG~G~ 128 (209)
T 1h2i_A 113 VQL--KDGS-YHEDVGYGV 128 (209)
T ss_dssp EEE--TTSC-EEEEEEEEE
T ss_pred EEE--CCCC-EecceeeEE
Confidence 444 6885 799988753
No 2
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=73.93 E-value=0.22 Score=33.53 Aligned_cols=15 Identities=27% Similarity=0.778 Sum_probs=11.4
Q ss_pred hhhhccCceeeeeeeE
Q 047987 101 IMNLHAPEWSGEVRNI 116 (153)
Q Consensus 101 iL~fyAPgW~gEVR~i 116 (153)
+++|||| |||-|+.+
T Consensus 24 vv~F~a~-wC~~C~~~ 38 (105)
T 3zzx_A 24 VIDFYAT-WCGPCKMI 38 (105)
T ss_dssp EEEEECT-TCHHHHHH
T ss_pred EEEEECC-CCCCccCC
Confidence 6789987 99877643
No 3
>1sh8_A Hypothetical protein PA5026; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.50A {Pseudomonas aeruginosa} SCOP: d.38.1.5
Probab=67.89 E-value=5.6 Score=27.53 Aligned_cols=47 Identities=19% Similarity=0.321 Sum_probs=35.5
Q ss_pred hhhccCceeeeeeeEEEe-------------eCCcEEEEEEEEEEEecccceeeeccceecc
Q 047987 102 MNLHAPEWSGEVRNITYS-------------VDGKTVSVVYRVTIYGTDAEVTSNSVNILLL 150 (153)
Q Consensus 102 L~fyAPgW~gEVR~i~ys-------------~dGksVsVvyRVTi~GtDge~~REATGT~~l 150 (153)
++|..|.- |+|+-...- ..|++ .++++++|+..||++.=+++||-.+
T Consensus 87 i~fl~p~~-G~l~a~a~v~~~~~~~~~~~~~~~gr~-~~~~~~~v~~~~g~~va~~~~t~~~ 146 (154)
T 1sh8_A 87 LRFRRPAK-GDIRVEARLDAERIRQLETEAGERGKA-EYSLELQLTDEQGEVVAESAALYQL 146 (154)
T ss_dssp EEECSCCC-SCEEEEEECCHHHHHHHHHHHHHHSEE-EEEEEEEEECTTCCEEEEEEEEEEE
T ss_pred EEEeccCC-CCEEEEEECCHHHHHHHHHHHHhCCce-EEEEEEEEEeCCCCEEEEEEEEEEE
Confidence 68889998 887655444 34654 4899999999999998888877543
No 4
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=66.20 E-value=0.72 Score=27.54 Aligned_cols=14 Identities=0% Similarity=0.097 Sum_probs=11.5
Q ss_pred hhhccCceeeeeeeE
Q 047987 102 MNLHAPEWSGEVRNI 116 (153)
Q Consensus 102 L~fyAPgW~gEVR~i 116 (153)
+.|||| ||+-++..
T Consensus 4 v~f~a~-wC~~C~~~ 17 (77)
T 1ilo_A 4 IQIYGT-GCANCQML 17 (77)
T ss_dssp EEEECS-SSSTTHHH
T ss_pred EEEEcC-CChhHHHH
Confidence 689998 99988653
No 5
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=63.94 E-value=0.76 Score=29.53 Aligned_cols=15 Identities=27% Similarity=0.944 Sum_probs=12.3
Q ss_pred hhhhccCceeeeeeeE
Q 047987 101 IMNLHAPEWSGEVRNI 116 (153)
Q Consensus 101 iL~fyAPgW~gEVR~i 116 (153)
++.|||| ||+.|+.+
T Consensus 29 lv~f~a~-wC~~C~~~ 43 (121)
T 2djj_A 29 LIEFYAP-WCGHCKAL 43 (121)
T ss_dssp EEEEECS-SCTTHHHH
T ss_pred EEEEECC-CCHhHHHh
Confidence 7889998 99988654
No 6
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=63.75 E-value=0.7 Score=32.08 Aligned_cols=15 Identities=7% Similarity=0.186 Sum_probs=12.3
Q ss_pred hhhhccCceeeeeeeE
Q 047987 101 IMNLHAPEWSGEVRNI 116 (153)
Q Consensus 101 iL~fyAPgW~gEVR~i 116 (153)
+++|||+ ||+-|+.+
T Consensus 51 lv~F~A~-WC~~C~~~ 65 (172)
T 3f9u_A 51 MLDFTGY-GCVNCRKM 65 (172)
T ss_dssp EEEEECT-TCHHHHHH
T ss_pred EEEEECC-CCHHHHHH
Confidence 7889998 99988764
No 7
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=61.35 E-value=1 Score=33.75 Aligned_cols=15 Identities=7% Similarity=0.138 Sum_probs=12.4
Q ss_pred hhhhccCceeeeeeeE
Q 047987 101 IMNLHAPEWSGEVRNI 116 (153)
Q Consensus 101 iL~fyAPgW~gEVR~i 116 (153)
+++|||| |||.|+.+
T Consensus 30 ~v~f~a~-wC~~C~~~ 44 (287)
T 3qou_A 30 LFYFWSE-RSQHCLQL 44 (287)
T ss_dssp EEEEECT-TCTTTTTT
T ss_pred EEEEECC-CChHHHHH
Confidence 7899998 99988753
No 8
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=61.00 E-value=0.82 Score=30.18 Aligned_cols=15 Identities=20% Similarity=0.375 Sum_probs=11.8
Q ss_pred hhhhccCceeeeeeeE
Q 047987 101 IMNLHAPEWSGEVRNI 116 (153)
Q Consensus 101 iL~fyAPgW~gEVR~i 116 (153)
++.|||| ||+.|+.+
T Consensus 37 lv~F~a~-wC~~C~~~ 51 (127)
T 3h79_A 37 FVLYYVP-WSRHSVAA 51 (127)
T ss_dssp EEEEECT-TCHHHHHH
T ss_pred EEEEECC-ccHHHHHH
Confidence 6789987 99988654
No 9
>3ebw_A PER A 4 allergen; beta barrel, cockroach; HET: PE4; 2.80A {Periplaneta americana}
Probab=60.94 E-value=5.9 Score=28.68 Aligned_cols=51 Identities=14% Similarity=0.227 Sum_probs=34.5
Q ss_pred chhhhhhhhhhccCceeeeeeeEEEe--eCCcEEEEEEEEEEEecccceeeeccceecc
Q 047987 94 PWHIVNRIMNLHAPEWSGEVRNITYS--VDGKTVSVVYRVTIYGTDAEVTSNSVNILLL 150 (153)
Q Consensus 94 PWy~anRiL~fyAPgW~gEVR~i~ys--~dGksVsVvyRVTi~GtDge~~REATGT~~l 150 (153)
-||.+.|+=+.+-.+- ..+...+|+ +|| +|.|+.+- + ||+...++.|++..
T Consensus 21 ~WYeiar~~~~fe~~~-~~~~~a~Y~l~~dg-~i~V~n~~--~--~g~~~~~~~G~a~~ 73 (163)
T 3ebw_A 21 TWYELFRTPNSDEEDF-TNCEYDKYTLDENG-VIQVTSVA--Y--TNSIRGFITSTGTV 73 (163)
T ss_dssp EEEEEEECCCSTTSSC-CSCEEEEEEECTTS-CEEEEEEE--E--CSTTSSEEEEEEEC
T ss_pred EeEEEEEeCcccccCc-CccceEEEEECCCC-eEEEEEEe--e--CCeEEEEEEEEEEe
Confidence 4999999877776652 033445665 577 59888876 3 77654488888765
No 10
>1sc0_A Hypothetical protein HI1161; structural genomics, unknown function, PSI-2, protein structure initiative; 1.70A {Haemophilus influenzae} SCOP: d.38.1.5 PDB: 2b6e_A 3lz7_A
Probab=57.82 E-value=9.7 Score=27.09 Aligned_cols=47 Identities=21% Similarity=0.213 Sum_probs=33.0
Q ss_pred hhhccCceeeeeeeEEE-eeCCcEEEEEEEEEEEecccceeeeccceec
Q 047987 102 MNLHAPEWSGEVRNITY-SVDGKTVSVVYRVTIYGTDAEVTSNSVNILL 149 (153)
Q Consensus 102 L~fyAPgW~gEVR~i~y-s~dGksVsVvyRVTi~GtDge~~REATGT~~ 149 (153)
.+|..|+-.|+++-... ---|+++ .+++++|+..||++.=.++||..
T Consensus 87 i~flrpa~~g~l~a~a~v~~~Gr~~-~~~~~~i~d~~g~lvA~a~~T~~ 134 (138)
T 1sc0_A 87 ANHLRPVRSGKVTARATPINLGRNI-QVWQIDIRTEENKLCCVSRLTLS 134 (138)
T ss_dssp EEECSCCCSSEEEEEEEEEEECSSE-EEEEEEEECTTSCEEEEEEEEEE
T ss_pred EEEEccCCCCcEEEEEEEEEcCCCE-EEEEEEEEcCCCCEEEEEEEEEE
Confidence 35777887777643211 1237777 78999999999999877777754
No 11
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=61.86 E-value=2.2 Score=27.82 Aligned_cols=16 Identities=6% Similarity=0.241 Sum_probs=12.3
Q ss_pred hhhhccCceeeeeeeEE
Q 047987 101 IMNLHAPEWSGEVRNIT 117 (153)
Q Consensus 101 iL~fyAPgW~gEVR~i~ 117 (153)
++.|||| ||+-|+.+.
T Consensus 23 lv~f~a~-wC~~C~~~~ 38 (130)
T 2lst_A 23 MVYFHSE-HCPYCQQMN 38 (130)
Confidence 7889987 888887653
No 12
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=56.00 E-value=1.2 Score=30.06 Aligned_cols=14 Identities=14% Similarity=0.178 Sum_probs=10.3
Q ss_pred hhhhccCceeeeeee
Q 047987 101 IMNLHAPEWSGEVRN 115 (153)
Q Consensus 101 iL~fyAPgW~gEVR~ 115 (153)
++.|||| ||+-|+.
T Consensus 16 vV~F~A~-WC~~C~~ 29 (106)
T 3kp8_A 16 GTMYGAY-WCPHCQD 29 (106)
T ss_dssp CEEEECT-TCHHHHH
T ss_pred EEEEECC-CCHHHHH
Confidence 6788886 8887654
No 13
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=54.74 E-value=1.7 Score=27.58 Aligned_cols=15 Identities=13% Similarity=0.727 Sum_probs=9.4
Q ss_pred hhhhccCceeeeeeeE
Q 047987 101 IMNLHAPEWSGEVRNI 116 (153)
Q Consensus 101 iL~fyAPgW~gEVR~i 116 (153)
++.|||| ||+.|+.+
T Consensus 25 ~v~f~a~-wC~~C~~~ 39 (112)
T 3d6i_A 25 VLYFHTS-WAEPCKAL 39 (112)
T ss_dssp EEEEECC-C--CHHHH
T ss_pred EEEEECC-CCHHHHHH
Confidence 6778887 89887543
No 14
>3ako_A Venus; fluorescent protein, GFP; HET: CR2 PE8; 2.10A {Plant transformation vector psiteii-4corganism_taxid}
Probab=54.61 E-value=20 Score=28.63 Aligned_cols=28 Identities=25% Similarity=0.342 Sum_probs=20.8
Q ss_pred cCc-eeeeeeeEEEeeCCcEEEEEEEEEEEe
Q 047987 106 APE-WSGEVRNITYSVDGKTVSVVYRVTIYG 135 (153)
Q Consensus 106 APg-W~gEVR~i~ys~dGksVsVvyRVTi~G 135 (153)
.|+ .++| |.+.|=+ |..+++.+++|+.|
T Consensus 107 fPeGyswe-Rt~~fED-GGv~ta~~~itleg 135 (173)
T 3ako_A 107 MPEGYVQE-RTIFFKD-DGNYKTRAEVKFEG 135 (173)
T ss_dssp TTTCEEEE-EEEEETT-SCEEEEEEEEEEET
T ss_pred CCCCeeEE-EEEEECC-CcEEEEEEEEEEEC
Confidence 565 7776 7777775 44788888998876
No 15
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=54.50 E-value=1.2 Score=29.19 Aligned_cols=14 Identities=21% Similarity=0.741 Sum_probs=10.2
Q ss_pred hhhhccCceeeeeee
Q 047987 101 IMNLHAPEWSGEVRN 115 (153)
Q Consensus 101 iL~fyAPgW~gEVR~ 115 (153)
++.|||| ||+.|+.
T Consensus 35 lv~F~a~-wC~~C~~ 48 (116)
T 3qfa_C 35 VVDFSAT-WCGPSKM 48 (116)
T ss_dssp EEEEECT-TCHHHHH
T ss_pred EEEEECC-CCHHHHH
Confidence 6778887 8887654
No 16
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=54.32 E-value=1.2 Score=28.34 Aligned_cols=14 Identities=7% Similarity=0.114 Sum_probs=10.2
Q ss_pred hhhhccCceeeeeee
Q 047987 101 IMNLHAPEWSGEVRN 115 (153)
Q Consensus 101 iL~fyAPgW~gEVR~ 115 (153)
++.|||| ||+.|+.
T Consensus 22 lv~f~a~-wC~~C~~ 35 (105)
T 4euy_A 22 LLFIKTE-NCGVCDV 35 (105)
T ss_dssp EEEEEES-SCHHHHH
T ss_pred EEEEeCC-CCcchHH
Confidence 6778886 8876653
No 17
>3e8p_A Uncharacterized protein; X-RAY Q8E9M7 SOR246 NESG structure, structural genomics, PSI-2, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=53.30 E-value=23 Score=25.38 Aligned_cols=47 Identities=11% Similarity=0.133 Sum_probs=31.0
Q ss_pred hhhccCceeeeeeeE-EEeeCCcEEEEEEEEEEEecccceeeeccceec
Q 047987 102 MNLHAPEWSGEVRNI-TYSVDGKTVSVVYRVTIYGTDAEVTSNSVNILL 149 (153)
Q Consensus 102 L~fyAPgW~gEVR~i-~ys~dGksVsVvyRVTi~GtDge~~REATGT~~ 149 (153)
++|..|.-.++|+-. ....-|+++ ++++++|+..||++.=.++||-.
T Consensus 115 v~flrp~~g~~l~a~a~v~~~Gr~~-~~~~~~i~~~~g~lvA~a~~tf~ 162 (164)
T 3e8p_A 115 VDYLRPGRGQIFTGTGSVIRAGNRV-SVCRMELHNEQGTHIAFGTGTYM 162 (164)
T ss_dssp EEECSCCCCSEEEEEEEEEECCSSE-EEEEEEEEETTCCEEEEEEEEEE
T ss_pred EEEecCCCCCeEEEEEEEEEcCCcE-EEEEEEEEeCCCCEEEEEEEEEE
Confidence 466777762223211 122347767 78999999999999988887743
No 18
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=52.77 E-value=1.5 Score=28.65 Aligned_cols=15 Identities=27% Similarity=0.966 Sum_probs=11.7
Q ss_pred hhhhccCceeeeeeeE
Q 047987 101 IMNLHAPEWSGEVRNI 116 (153)
Q Consensus 101 iL~fyAPgW~gEVR~i 116 (153)
++.|||| ||+.|+.+
T Consensus 29 lv~f~a~-wC~~C~~~ 43 (133)
T 2dj3_A 29 LIEFYAP-WCGHCKQL 43 (133)
T ss_dssp EEEECCT-TCSHHHHH
T ss_pred EEEEECC-CChhHHHH
Confidence 7889987 89887653
No 19
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=52.07 E-value=3 Score=27.38 Aligned_cols=42 Identities=17% Similarity=0.252 Sum_probs=24.2
Q ss_pred HhcccCCcc-cccccccCCccccccchhhhhhhhhhccCceeeeeee
Q 047987 70 ELNKNVPNS-LIKIRVEDGFSMKYIPWHIVNRIMNLHAPEWSGEVRN 115 (153)
Q Consensus 70 dLnKrVPD~-lvktr~~~g~s~~yIPWy~anRiL~fyAPgW~gEVR~ 115 (153)
.+++.+|+- -+.. .+| .+..=-.-.-.-+|.|||+ ||+-|+.
T Consensus 3 ~~g~~~p~~~~l~~--~~g-~~~l~~~~gk~vll~F~a~-wC~~C~~ 45 (144)
T 1o73_A 3 GLAKYLPGATNLLS--KSG-EVSLGSLVGKTVFLYFSAS-WCPPCRG 45 (144)
T ss_dssp GGGGTSCTTCCBBC--TTS-CBCSGGGTTCEEEEEEECT-TCHHHHH
T ss_pred chhhhCccceEeec--CCC-cCcHHHhCCCEEEEEEECc-CCHHHHH
Confidence 356788885 3332 245 4433222222348899985 9998754
No 20
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=51.68 E-value=1.9 Score=28.89 Aligned_cols=15 Identities=27% Similarity=0.729 Sum_probs=11.8
Q ss_pred hhhhccCceeeeeeeE
Q 047987 101 IMNLHAPEWSGEVRNI 116 (153)
Q Consensus 101 iL~fyAPgW~gEVR~i 116 (153)
++.|||| ||+.|+.+
T Consensus 30 lv~f~a~-wC~~C~~~ 44 (137)
T 2dj0_A 30 IVEFFAN-WSNDCQSF 44 (137)
T ss_dssp EEEECCT-TCSTTTTT
T ss_pred EEEEECC-CCHHHHHH
Confidence 7889987 99887653
No 21
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=51.51 E-value=1.5 Score=30.78 Aligned_cols=14 Identities=0% Similarity=-0.076 Sum_probs=11.0
Q ss_pred hhhhccCceeeeeee
Q 047987 101 IMNLHAPEWSGEVRN 115 (153)
Q Consensus 101 iL~fyAPgW~gEVR~ 115 (153)
+++|||| ||+-|+.
T Consensus 27 lv~F~a~-WC~~C~~ 40 (149)
T 3gix_A 27 VLRFGRD-EDPVCLQ 40 (149)
T ss_dssp EEEEECT-TSHHHHH
T ss_pred EEEEECC-CCHHHHH
Confidence 6788887 8887764
No 22
>1o0i_A Hypothetical protein HI1161; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 1.70A {Haemophilus influenzae} PDB: 1sc0_A 2b6e_A 3lz7_A
Probab=51.44 E-value=14 Score=25.26 Aligned_cols=46 Identities=22% Similarity=0.258 Sum_probs=30.7
Q ss_pred hhhccCceeeeeeeE--EEeeCCcEEEEEEEEEEEecccceeeeccceec
Q 047987 102 MNLHAPEWSGEVRNI--TYSVDGKTVSVVYRVTIYGTDAEVTSNSVNILL 149 (153)
Q Consensus 102 L~fyAPgW~gEVR~i--~ys~dGksVsVvyRVTi~GtDge~~REATGT~~ 149 (153)
++|..|.-.|+|+-. ... -|+++ .++++.|+..||+..=.++||-.
T Consensus 87 i~fl~p~~~g~l~~~a~v~~-~gr~~-~~~~~~i~~~~g~lvA~a~~t~~ 134 (138)
T 1o0i_A 87 ANHLRPVRSGKVTARATPIN-LGRNI-QVWQIDIRTEENKLCCVSRLTLS 134 (138)
T ss_dssp EEECSCCCSSEEEEEEEEEE-ECSSE-EEEEEEEECTTSCEEEEEEEEEE
T ss_pred EEEEccCCCcEEEEEEEEEE-CCCcE-EEEEEEEEeCCCcEEEEEEEEEE
Confidence 466777766644322 222 25555 77899999999999888877753
No 23
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=50.94 E-value=1.2 Score=33.13 Aligned_cols=16 Identities=6% Similarity=0.108 Sum_probs=13.8
Q ss_pred hhhhhccCcee--eeeeeE
Q 047987 100 RIMNLHAPEWS--GEVRNI 116 (153)
Q Consensus 100 RiL~fyAPgW~--gEVR~i 116 (153)
-++.|+|+ || |+|+.+
T Consensus 36 vlVdF~A~-wCr~gpCk~i 53 (137)
T 2qsi_A 36 VVLFFRGD-AVRFPEAADL 53 (137)
T ss_dssp EEEEECCC-TTTCTTHHHH
T ss_pred EEEEEeCC-ccCCCchhhH
Confidence 57899999 88 999876
No 24
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=50.22 E-value=1.6 Score=27.54 Aligned_cols=14 Identities=7% Similarity=0.142 Sum_probs=10.1
Q ss_pred hhhhccCceeeeeee
Q 047987 101 IMNLHAPEWSGEVRN 115 (153)
Q Consensus 101 iL~fyAPgW~gEVR~ 115 (153)
++.|||| ||+.|+.
T Consensus 25 ~v~f~a~-wC~~C~~ 38 (107)
T 1gh2_A 25 VVKFTMR-GCGPCLR 38 (107)
T ss_dssp EEEEECS-SCHHHHH
T ss_pred EEEEECC-CChhhHH
Confidence 5778887 8887654
No 25
>4exr_A Putative lipoprotein; YPEB domain dimer, structural genomics, joint center for STR genomics, JCSG, protein structure initiative; 1.85A {Clostridium difficile}
Probab=50.11 E-value=35 Score=25.81 Aligned_cols=69 Identities=12% Similarity=0.268 Sum_probs=49.7
Q ss_pred CCCCCCCCCcchhHHHHHHHhcccCCc-cccccccc--CCccccccchhhhhhhhhhccCceeeeeeeEEEeeCCcEEEE
Q 047987 51 ENDAVPTSGISRPLSEILKELNKNVPN-SLIKIRVE--DGFSMKYIPWHIVNRIMNLHAPEWSGEVRNITYSVDGKTVSV 127 (153)
Q Consensus 51 ~~~~vp~s~itRPLaEILrdLnKrVPD-~lvktr~~--~g~s~~yIPWy~anRiL~fyAPgW~gEVR~i~ys~dGksVsV 127 (153)
++..+....+.-++.+++.-..+.+|+ .+++...+ +| .|.|||. .+ .|| .
T Consensus 21 ~~~~~~~~~~~is~e~A~~~a~~~~pga~I~~iele~~~G--------------------~~vYEVe--~~-~~g----~ 73 (174)
T 4exr_A 21 NNENLMEQDFKVPYTDAINIFKDKYKDADIVDLSLERDLN--------------------KFVYTVE--GV-DDN----N 73 (174)
T ss_dssp -CCCGGGCCCSSCHHHHHHHHHHHSTTCEEEEEEEEEETT--------------------EEEEEEE--EE-CSS----E
T ss_pred cchhhhhccCCCCHHHHHHHHHHHCCCCEEEEEEEEEeCC--------------------EEEEEEE--EE-ECC----E
Confidence 344466677888999999999999999 56554322 22 3677773 23 366 5
Q ss_pred EEEEEEEecccceeeeccc
Q 047987 128 VYRVTIYGTDAEVTSNSVN 146 (153)
Q Consensus 128 vyRVTi~GtDge~~REATG 146 (153)
.|.|.|-...|++....+.
T Consensus 74 e~ev~IDA~tG~Vl~~~~e 92 (174)
T 4exr_A 74 EYKMKIDANTKDVLEDKTE 92 (174)
T ss_dssp EEEEEEETTTCCEEEEEEE
T ss_pred EEEEEEECCCCcEeccccc
Confidence 7999999999999987643
No 26
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=49.80 E-value=1.7 Score=27.24 Aligned_cols=14 Identities=0% Similarity=-0.038 Sum_probs=10.3
Q ss_pred hhhhccCceeeeeee
Q 047987 101 IMNLHAPEWSGEVRN 115 (153)
Q Consensus 101 iL~fyAPgW~gEVR~ 115 (153)
++.||+| ||+.|+.
T Consensus 26 lv~f~a~-~C~~C~~ 39 (111)
T 3gnj_A 26 LVMFSRK-NCHVCQK 39 (111)
T ss_dssp EEEEECS-SCHHHHH
T ss_pred EEEEeCC-CChhHHH
Confidence 6778886 8877654
No 27
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=49.64 E-value=2.8 Score=32.87 Aligned_cols=13 Identities=15% Similarity=0.112 Sum_probs=10.5
Q ss_pred hhhhccCceeeeeee
Q 047987 101 IMNLHAPEWSGEVRN 115 (153)
Q Consensus 101 iL~fyAPgW~gEVR~ 115 (153)
+++|||| ||| ++.
T Consensus 32 lV~F~a~-wC~-c~~ 44 (350)
T 1sji_A 32 CLYYHES-VSS-DKV 44 (350)
T ss_dssp EEEEECC-SCS-SST
T ss_pred EEEEECC-CCc-chh
Confidence 6899997 999 753
No 28
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=48.77 E-value=1.7 Score=28.08 Aligned_cols=14 Identities=21% Similarity=0.717 Sum_probs=10.5
Q ss_pred hhhhccCceeeeeee
Q 047987 101 IMNLHAPEWSGEVRN 115 (153)
Q Consensus 101 iL~fyAPgW~gEVR~ 115 (153)
++.|||| ||+-|+.
T Consensus 28 lv~f~a~-wC~~C~~ 41 (109)
T 3f3q_A 28 VVDFYAT-WCGPCKM 41 (109)
T ss_dssp EEEEECT-TCHHHHH
T ss_pred EEEEECC-cCHhHHH
Confidence 6788887 8887654
No 29
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=48.61 E-value=1.7 Score=28.13 Aligned_cols=14 Identities=7% Similarity=-0.095 Sum_probs=10.2
Q ss_pred hhhhccCceeeeeee
Q 047987 101 IMNLHAPEWSGEVRN 115 (153)
Q Consensus 101 iL~fyAPgW~gEVR~ 115 (153)
++.|||| ||+-|+.
T Consensus 33 ~v~f~a~-wC~~C~~ 46 (118)
T 1zma_A 33 TFFIGRK-TCPYCRK 46 (118)
T ss_dssp EEEEECT-TCHHHHH
T ss_pred EEEEECC-CCccHHH
Confidence 6778886 8887754
No 30
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=48.52 E-value=1.9 Score=31.70 Aligned_cols=16 Identities=13% Similarity=0.301 Sum_probs=12.9
Q ss_pred hhhhhccCceeeeeeeE
Q 047987 100 RIMNLHAPEWSGEVRNI 116 (153)
Q Consensus 100 RiL~fyAPgW~gEVR~i 116 (153)
.+++|+|+ |||-|+..
T Consensus 57 vvv~F~A~-WC~pC~~~ 72 (167)
T 1z6n_A 57 RLLVAGEM-WCPDCQIN 72 (167)
T ss_dssp EEEEECCT-TCHHHHHH
T ss_pred EEEEEECC-CChhHHHH
Confidence 47899998 99998753
No 31
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=48.50 E-value=1.7 Score=28.70 Aligned_cols=16 Identities=13% Similarity=0.310 Sum_probs=12.2
Q ss_pred hhhhhccCceeeeeeeE
Q 047987 100 RIMNLHAPEWSGEVRNI 116 (153)
Q Consensus 100 RiL~fyAPgW~gEVR~i 116 (153)
-++.|||| ||+.|+..
T Consensus 45 vlv~F~a~-wC~~C~~~ 60 (128)
T 3ul3_B 45 IVLYFFAK-WCQACTMQ 60 (128)
T ss_dssp EEEEEECT-TCHHHHHH
T ss_pred EEEEEECC-CCHHHHHH
Confidence 37899987 89877643
No 32
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=48.31 E-value=1.8 Score=29.47 Aligned_cols=14 Identities=7% Similarity=-0.090 Sum_probs=9.6
Q ss_pred hhhhccCceeeeeee
Q 047987 101 IMNLHAPEWSGEVRN 115 (153)
Q Consensus 101 iL~fyAPgW~gEVR~ 115 (153)
++.|||| ||+.|+.
T Consensus 34 vv~f~a~-wC~~C~~ 47 (135)
T 2dbc_A 34 VIHLYRS-SVPMCLV 47 (135)
T ss_dssp EEEECCT-TCHHHHH
T ss_pred EEEEECC-CChHHHH
Confidence 5777775 7877654
No 33
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=47.12 E-value=2 Score=28.03 Aligned_cols=14 Identities=29% Similarity=0.802 Sum_probs=11.2
Q ss_pred hhhhccCceeeeeee
Q 047987 101 IMNLHAPEWSGEVRN 115 (153)
Q Consensus 101 iL~fyAPgW~gEVR~ 115 (153)
++.|||| ||+.|+.
T Consensus 26 lv~f~a~-wC~~C~~ 39 (126)
T 1x5e_A 26 MIEFYAP-WCPACQN 39 (126)
T ss_dssp EEEEECS-SCHHHHH
T ss_pred EEEEECC-CCHHHHH
Confidence 7889987 8987764
No 34
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=46.98 E-value=2.1 Score=33.21 Aligned_cols=15 Identities=27% Similarity=0.800 Sum_probs=12.4
Q ss_pred hhhhhccCceeeeeee
Q 047987 100 RIMNLHAPEWSGEVRN 115 (153)
Q Consensus 100 RiL~fyAPgW~gEVR~ 115 (153)
-++.|||| |||-|+.
T Consensus 270 ~lv~f~a~-wC~~C~~ 284 (361)
T 3uem_A 270 VFVEFYAP-WCGHCKQ 284 (361)
T ss_dssp EEEEEECT-TCHHHHH
T ss_pred EEEEEecC-cCHhHHH
Confidence 47899998 9998765
No 35
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=46.89 E-value=2 Score=27.94 Aligned_cols=15 Identities=27% Similarity=0.910 Sum_probs=11.2
Q ss_pred hhhhccCceeeeeeeE
Q 047987 101 IMNLHAPEWSGEVRNI 116 (153)
Q Consensus 101 iL~fyAPgW~gEVR~i 116 (153)
++.||+| ||+.|+.+
T Consensus 39 lv~f~a~-wC~~C~~~ 53 (130)
T 2dml_A 39 LVEFYAP-WCGHCQRL 53 (130)
T ss_dssp EEEEECT-TCSTTGGG
T ss_pred EEEEECC-CCHHHHhh
Confidence 6788886 88887653
No 36
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=46.03 E-value=2.7 Score=26.26 Aligned_cols=15 Identities=27% Similarity=0.924 Sum_probs=11.4
Q ss_pred hhhhccCceeeeeeeE
Q 047987 101 IMNLHAPEWSGEVRNI 116 (153)
Q Consensus 101 iL~fyAPgW~gEVR~i 116 (153)
++.||+| ||+.|+..
T Consensus 28 lv~f~~~-~C~~C~~~ 42 (120)
T 1mek_A 28 LVEFYAP-WCGHCKAL 42 (120)
T ss_dssp EEEEECS-SCSTTSTT
T ss_pred EEEEECC-CCHHHHHh
Confidence 6788887 88887654
No 37
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=44.74 E-value=2.3 Score=28.12 Aligned_cols=15 Identities=27% Similarity=0.740 Sum_probs=11.4
Q ss_pred hhhhccCceeeeeeeE
Q 047987 101 IMNLHAPEWSGEVRNI 116 (153)
Q Consensus 101 iL~fyAPgW~gEVR~i 116 (153)
++.|||| ||+.|+.+
T Consensus 55 lv~f~a~-wC~~C~~~ 69 (141)
T 3hxs_A 55 IVDFYAD-WCGPCKMV 69 (141)
T ss_dssp EEEEECT-TCTTHHHH
T ss_pred EEEEECC-CCHHHHHH
Confidence 7889985 89877653
No 38
>2zmu_A Fluorescent protein; GFP-like protein, luminescent protein, structural genomics, structural genomics/proteomics initiative, RSGI, NPPSFA; HET: CFY; 1.65A {Fungia concinna} PDB: 2zmw_A* 3mgf_A*
Probab=44.68 E-value=22 Score=29.17 Aligned_cols=26 Identities=31% Similarity=0.525 Sum_probs=20.5
Q ss_pred ceeeeeeeEEEeeCCcEEEEEEEEEEEe
Q 047987 108 EWSGEVRNITYSVDGKTVSVVYRVTIYG 135 (153)
Q Consensus 108 gW~gEVR~i~ys~dGksVsVvyRVTi~G 135 (153)
|.++| |.+.|= ||..+++.+++|+.|
T Consensus 86 Gyswe-Rt~~fE-DGGv~t~~~~isleg 111 (223)
T 2zmu_A 86 GLSWE-RSLEFE-DGGSASVSAHISLRG 111 (223)
T ss_dssp CEEEE-EEEEET-TSCEEEEEEEEEEET
T ss_pred CeeEE-EEEEEC-CCcEEEEEEEEEEEC
Confidence 57888 999986 455788988888875
No 39
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=44.20 E-value=2.3 Score=30.35 Aligned_cols=15 Identities=27% Similarity=0.933 Sum_probs=11.9
Q ss_pred hhhhccCceeeeeeeE
Q 047987 101 IMNLHAPEWSGEVRNI 116 (153)
Q Consensus 101 iL~fyAPgW~gEVR~i 116 (153)
++.|||| ||+.|+..
T Consensus 36 ~v~F~a~-wC~~C~~~ 50 (241)
T 3idv_A 36 LLEFYAP-WCGHCKQF 50 (241)
T ss_dssp EEEEECT-TCHHHHHH
T ss_pred EEEEECC-CCHHHHHh
Confidence 7899997 99987653
No 40
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=44.02 E-value=2.6 Score=34.12 Aligned_cols=16 Identities=31% Similarity=0.928 Sum_probs=13.0
Q ss_pred hhhhhccCceeeeeeeE
Q 047987 100 RIMNLHAPEWSGEVRNI 116 (153)
Q Consensus 100 RiL~fyAPgW~gEVR~i 116 (153)
=++.|||| |||.|+.+
T Consensus 373 vlv~f~a~-wC~~C~~~ 388 (481)
T 3f8u_A 373 VLIEFYAP-WCGHCKNL 388 (481)
T ss_dssp EEEEEECT-TBHHHHHH
T ss_pred EEEEEecC-cChhHHHh
Confidence 47899998 99988753
No 41
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=43.96 E-value=2.9 Score=27.63 Aligned_cols=42 Identities=17% Similarity=0.153 Sum_probs=21.9
Q ss_pred hcccCCcc-cccccccCCccccccchhhhhhhhhhccCceeeeeee
Q 047987 71 LNKNVPNS-LIKIRVEDGFSMKYIPWHIVNRIMNLHAPEWSGEVRN 115 (153)
Q Consensus 71 LnKrVPD~-lvktr~~~g~s~~yIPWy~anRiL~fyAPgW~gEVR~ 115 (153)
|.+.+|+. -+.. .+|-.+..=-.-.-.-+|.|||+ ||+-|+.
T Consensus 3 ~~~~~P~~f~l~~--~~g~~~~l~~~~gk~vll~F~a~-wC~~C~~ 45 (144)
T 1i5g_A 3 LKKFFPYSTNVLK--GAAADIALPSLAGKTVFFYFSAS-WCPPSRA 45 (144)
T ss_dssp TTTSCSSCSEEEE--TTEEEEEGGGGTTSEEEEEEECT-TCHHHHH
T ss_pred hhhhCCCceEEEc--CCCCEecHHHcCCCEEEEEEECC-CCHHHHH
Confidence 56778883 2222 23422221111112247899994 9997754
No 42
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=43.86 E-value=2.3 Score=28.33 Aligned_cols=15 Identities=7% Similarity=0.036 Sum_probs=13.0
Q ss_pred hhhhhccCceeeeeee
Q 047987 100 RIMNLHAPEWSGEVRN 115 (153)
Q Consensus 100 RiL~fyAPgW~gEVR~ 115 (153)
=+|+|||+ ||+-|+.
T Consensus 33 vlv~F~a~-~C~~C~~ 47 (160)
T 3lor_A 33 VVVEVFQM-LCPGCVN 47 (160)
T ss_dssp EEEEEECT-TCHHHHH
T ss_pred EEEEEEcC-CCcchhh
Confidence 37899998 9999976
No 43
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=43.80 E-value=2.1 Score=28.84 Aligned_cols=15 Identities=7% Similarity=-0.017 Sum_probs=11.6
Q ss_pred hhhhccCceeeeeeeE
Q 047987 101 IMNLHAPEWSGEVRNI 116 (153)
Q Consensus 101 iL~fyAPgW~gEVR~i 116 (153)
++.|||| ||+-|+.+
T Consensus 35 lv~F~a~-wC~~C~~~ 49 (135)
T 3emx_A 35 ILAVYSK-TCPHCHRD 49 (135)
T ss_dssp EEEEEET-TCHHHHHH
T ss_pred EEEEECC-cCHhhhHh
Confidence 7789987 99887653
No 44
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=43.25 E-value=2.5 Score=30.37 Aligned_cols=17 Identities=12% Similarity=0.038 Sum_probs=13.5
Q ss_pred hhhhhhccCceeeeeeeE
Q 047987 99 NRIMNLHAPEWSGEVRNI 116 (153)
Q Consensus 99 nRiL~fyAPgW~gEVR~i 116 (153)
.-|+.|||| ||+-|+-+
T Consensus 20 ~~LV~F~A~-wC~~Ck~~ 36 (116)
T 3dml_A 20 LRLLMFEQP-GCLYCARW 36 (116)
T ss_dssp EEEEEEECT-TCHHHHHH
T ss_pred CEEEEEECC-CCHHHHHH
Confidence 358899998 99988765
No 45
>3hdu_A Putative thioesterase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 2.50A {Syntrophus aciditrophicus SB}
Probab=43.21 E-value=37 Score=23.93 Aligned_cols=45 Identities=16% Similarity=0.203 Sum_probs=29.3
Q ss_pred hhhccCceeeeee--eEEEeeCCcEEEEEEEEEEEecccceeeecccee
Q 047987 102 MNLHAPEWSGEVR--NITYSVDGKTVSVVYRVTIYGTDAEVTSNSVNIL 148 (153)
Q Consensus 102 L~fyAPgW~gEVR--~i~ys~dGksVsVvyRVTi~GtDge~~REATGT~ 148 (153)
++|..|.-.++++ .-+.. .|+++ .+++++|+..||++.=.++||-
T Consensus 108 i~ylrp~~g~~l~a~a~v~~-~gr~~-~~~~~~i~~~~g~lvA~a~~t~ 154 (157)
T 3hdu_A 108 VEYLRPGLGREFVCTGYNVR-TGNKV-AVIRTELMNDQDELIAVGSVSY 154 (157)
T ss_dssp EEESSCCCCSEEEEEEEEEE-ECSSE-EEEEEEEEETTCCEEEEEEEEE
T ss_pred EEEECCCCCCeEEEEEEEEE-cCCeE-EEEEEEEEeCCCcEEEEEEEEE
Confidence 3667777622232 11222 36665 7789999999999988777764
No 46
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=42.71 E-value=2.6 Score=31.13 Aligned_cols=15 Identities=20% Similarity=0.578 Sum_probs=12.3
Q ss_pred hhhhccCceeeeeeeE
Q 047987 101 IMNLHAPEWSGEVRNI 116 (153)
Q Consensus 101 iL~fyAPgW~gEVR~i 116 (153)
++.|||| ||+-|+.+
T Consensus 34 lv~F~a~-wC~~C~~~ 48 (244)
T 3q6o_A 34 AVEFFAS-WCGHCIAF 48 (244)
T ss_dssp EEEEECT-TCHHHHHH
T ss_pred EEEEECC-cCHHHHHH
Confidence 6889997 99988754
No 47
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=42.60 E-value=2.7 Score=33.06 Aligned_cols=14 Identities=29% Similarity=0.949 Sum_probs=11.1
Q ss_pred hhhhccCceeeeeee
Q 047987 101 IMNLHAPEWSGEVRN 115 (153)
Q Consensus 101 iL~fyAPgW~gEVR~ 115 (153)
++.|||| |||-|+.
T Consensus 39 lV~F~A~-wC~~C~~ 52 (298)
T 3ed3_A 39 LVEFYAP-WCGHCKK 52 (298)
T ss_dssp EEEEECT-TCHHHHH
T ss_pred EEEEECC-CCHHHHH
Confidence 6789987 8987754
No 48
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=42.60 E-value=2.4 Score=27.44 Aligned_cols=14 Identities=36% Similarity=1.013 Sum_probs=11.1
Q ss_pred hhhhccCceeeeeee
Q 047987 101 IMNLHAPEWSGEVRN 115 (153)
Q Consensus 101 iL~fyAPgW~gEVR~ 115 (153)
++.|||| ||+-|+.
T Consensus 29 lv~f~a~-wC~~C~~ 42 (133)
T 1x5d_A 29 MVEFYAP-WCGHCKN 42 (133)
T ss_dssp EEEEECT-TCHHHHT
T ss_pred EEEEECC-CCHHHHh
Confidence 7888987 8988864
No 49
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=42.35 E-value=2.5 Score=26.25 Aligned_cols=14 Identities=29% Similarity=0.918 Sum_probs=11.0
Q ss_pred hhhhccCceeeeeee
Q 047987 101 IMNLHAPEWSGEVRN 115 (153)
Q Consensus 101 iL~fyAPgW~gEVR~ 115 (153)
++.||+| ||+.|+.
T Consensus 25 lv~f~~~-~C~~C~~ 38 (111)
T 3uvt_A 25 FIKFYAP-WCGHCKT 38 (111)
T ss_dssp EEEEECS-SCHHHHH
T ss_pred EEEEECC-CChhHHH
Confidence 7788886 8888764
No 50
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=42.15 E-value=2.6 Score=28.58 Aligned_cols=14 Identities=14% Similarity=0.510 Sum_probs=9.6
Q ss_pred hhhhccCceeeeeee
Q 047987 101 IMNLHAPEWSGEVRN 115 (153)
Q Consensus 101 iL~fyAPgW~gEVR~ 115 (153)
++.|||| ||+-|+.
T Consensus 44 vv~F~a~-wC~~C~~ 57 (133)
T 3cxg_A 44 VIKFGAV-WCKPCNK 57 (133)
T ss_dssp EEEEECT-TCHHHHH
T ss_pred EEEEECC-CCHHHHH
Confidence 5777876 7876654
No 51
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=41.67 E-value=2.5 Score=27.14 Aligned_cols=14 Identities=36% Similarity=1.009 Sum_probs=10.8
Q ss_pred hhhhccCceeeeeee
Q 047987 101 IMNLHAPEWSGEVRN 115 (153)
Q Consensus 101 iL~fyAPgW~gEVR~ 115 (153)
++.|||| ||+.|+.
T Consensus 25 lv~f~a~-~C~~C~~ 38 (122)
T 3aps_A 25 VVDFYAP-WCGPCQN 38 (122)
T ss_dssp EEEEECT-TCHHHHH
T ss_pred EEEEECC-CCHHHHH
Confidence 6788887 8887754
No 52
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=41.59 E-value=2.5 Score=27.14 Aligned_cols=13 Identities=23% Similarity=0.882 Sum_probs=9.5
Q ss_pred hhhhccCceeeeee
Q 047987 101 IMNLHAPEWSGEVR 114 (153)
Q Consensus 101 iL~fyAPgW~gEVR 114 (153)
++.|||| ||+.|+
T Consensus 37 vv~f~a~-wC~~C~ 49 (117)
T 2xc2_A 37 VVDFFAT-WCGPCK 49 (117)
T ss_dssp EEEEECT-TCHHHH
T ss_pred EEEEECC-CCHhHH
Confidence 6778886 887664
No 53
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=41.48 E-value=2.7 Score=27.69 Aligned_cols=15 Identities=27% Similarity=0.933 Sum_probs=11.5
Q ss_pred hhhhccCceeeeeeeE
Q 047987 101 IMNLHAPEWSGEVRNI 116 (153)
Q Consensus 101 iL~fyAPgW~gEVR~i 116 (153)
++.||+| ||+-|+.+
T Consensus 38 lv~f~a~-wC~~C~~~ 52 (140)
T 2dj1_A 38 LLEFYAP-WCGHCKQF 52 (140)
T ss_dssp EEEECCT-TCHHHHTT
T ss_pred EEEEECC-CCHHHHHh
Confidence 7888986 89887654
No 54
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=41.23 E-value=2.6 Score=29.23 Aligned_cols=14 Identities=7% Similarity=0.408 Sum_probs=9.9
Q ss_pred hhhhccCceeeeeee
Q 047987 101 IMNLHAPEWSGEVRN 115 (153)
Q Consensus 101 iL~fyAPgW~gEVR~ 115 (153)
+++|||| ||+-|+.
T Consensus 27 lv~F~a~-wC~~C~~ 40 (142)
T 1qgv_A 27 VIRFGHD-WDPTCMK 40 (142)
T ss_dssp EEEEECT-TSHHHHH
T ss_pred EEEEECC-CCHHHHH
Confidence 5778885 8887654
No 55
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=40.88 E-value=3.2 Score=26.77 Aligned_cols=14 Identities=21% Similarity=0.332 Sum_probs=10.8
Q ss_pred hhhhccCceeeeeee
Q 047987 101 IMNLHAPEWSGEVRN 115 (153)
Q Consensus 101 iL~fyAPgW~gEVR~ 115 (153)
++.|||| ||+.|+.
T Consensus 23 vv~f~a~-wC~~C~~ 36 (110)
T 2l6c_A 23 IVFFHKN-LCPHCKN 36 (110)
T ss_dssp EEEEECS-SCSTHHH
T ss_pred EEEEECC-CCHhHHH
Confidence 6788887 8887754
No 56
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=40.61 E-value=2.9 Score=25.74 Aligned_cols=14 Identities=14% Similarity=0.321 Sum_probs=10.3
Q ss_pred hhhhccCceeeeeee
Q 047987 101 IMNLHAPEWSGEVRN 115 (153)
Q Consensus 101 iL~fyAPgW~gEVR~ 115 (153)
++.||+| ||+.|+.
T Consensus 23 lv~f~~~-~C~~C~~ 36 (106)
T 3die_A 23 LVDFWAT-ACGPCKM 36 (106)
T ss_dssp EEEEECS-BCHHHHH
T ss_pred EEEEECC-CCHHHHH
Confidence 7788876 8886654
No 57
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=40.35 E-value=3.1 Score=33.21 Aligned_cols=15 Identities=20% Similarity=0.450 Sum_probs=11.4
Q ss_pred hhhhccCceeeeeeeE
Q 047987 101 IMNLHAPEWSGEVRNI 116 (153)
Q Consensus 101 iL~fyAPgW~gEVR~i 116 (153)
++.|||| |||-|+.+
T Consensus 26 lV~F~a~-wC~~C~~~ 40 (382)
T 2r2j_A 26 LVNFYAD-WCRFSQML 40 (382)
T ss_dssp EEEEECT-TCHHHHHH
T ss_pred EEEEECC-CCHHHHHH
Confidence 6788887 88887653
No 58
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=40.20 E-value=4 Score=26.20 Aligned_cols=15 Identities=27% Similarity=0.742 Sum_probs=10.7
Q ss_pred hhhhhccCceeeeeee
Q 047987 100 RIMNLHAPEWSGEVRN 115 (153)
Q Consensus 100 RiL~fyAPgW~gEVR~ 115 (153)
-++.|||| ||+-|+.
T Consensus 20 ~lv~f~a~-wC~~C~~ 34 (112)
T 2voc_A 20 VLADFWAP-WCGPSKM 34 (112)
T ss_dssp EEEEEECT-TBGGGGG
T ss_pred EEEEEECC-CCHHHHH
Confidence 36788884 8887754
No 59
>1n9l_A PHOT-LOV1, putative blue light receptor; phototropin, flavin, electron transport; HET: FMN; 1.90A {Chlamydomonas reinhardtii} SCOP: d.110.3.6 PDB: 1n9n_A* 1n9o_A*
Probab=39.99 E-value=63 Score=19.75 Aligned_cols=31 Identities=32% Similarity=0.352 Sum_probs=21.1
Q ss_pred eeeeeeeEEEeeCCcEEEEEEEEE-EEeccccee
Q 047987 109 WSGEVRNITYSVDGKTVSVVYRVT-IYGTDAEVT 141 (153)
Q Consensus 109 W~gEVR~i~ys~dGksVsVvyRVT-i~GtDge~~ 141 (153)
|.+|++. +..||..+.+-..++ |+..+|++.
T Consensus 67 ~~~e~~~--~~kdG~~~~~~~~~~pi~d~~G~~~ 98 (109)
T 1n9l_A 67 CSVRLLN--YRKDGTPFWNLLTVTPIKTPDGRVS 98 (109)
T ss_dssp EEEEEEE--ECTTSCEEEEEEEEEEEECTTSCEE
T ss_pred EEEEEEE--EcCCCCEEEEEEEEEEEECCCCCEE
Confidence 9999955 678897655444443 567788764
No 60
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=39.94 E-value=2.8 Score=27.52 Aligned_cols=14 Identities=21% Similarity=0.615 Sum_probs=8.8
Q ss_pred hhhhccCceeeeeee
Q 047987 101 IMNLHAPEWSGEVRN 115 (153)
Q Consensus 101 iL~fyAPgW~gEVR~ 115 (153)
++.|||| ||+-|+.
T Consensus 33 lv~f~a~-wC~~C~~ 46 (133)
T 3fk8_A 33 LLVFGAN-WCTDCRA 46 (133)
T ss_dssp EEEEECT-TCHHHHH
T ss_pred EEEEcCC-CCHHHHH
Confidence 5667765 7776653
No 61
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=39.88 E-value=2.9 Score=28.24 Aligned_cols=14 Identities=7% Similarity=0.135 Sum_probs=10.5
Q ss_pred hhhhccCceeeeeee
Q 047987 101 IMNLHAPEWSGEVRN 115 (153)
Q Consensus 101 iL~fyAPgW~gEVR~ 115 (153)
++.|||| ||+.|+.
T Consensus 28 lv~F~a~-wC~~C~~ 41 (140)
T 3hz4_A 28 VVMFYSP-ACPYCKA 41 (140)
T ss_dssp EEEEECT-TCHHHHH
T ss_pred EEEEECC-CChhHHH
Confidence 6788887 8887654
No 62
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=39.84 E-value=2.8 Score=26.92 Aligned_cols=14 Identities=29% Similarity=0.824 Sum_probs=9.8
Q ss_pred hhhhccCceeeeeee
Q 047987 101 IMNLHAPEWSGEVRN 115 (153)
Q Consensus 101 iL~fyAPgW~gEVR~ 115 (153)
++.||+| ||+-|+.
T Consensus 38 vv~f~~~-~C~~C~~ 51 (122)
T 2vlu_A 38 VIDFTAS-WCGPCRI 51 (122)
T ss_dssp EEEEECT-TCHHHHH
T ss_pred EEEEECC-CCHHHHH
Confidence 6778876 8876643
No 63
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=39.62 E-value=2.8 Score=25.87 Aligned_cols=14 Identities=14% Similarity=0.432 Sum_probs=10.0
Q ss_pred hhhhccCceeeeeee
Q 047987 101 IMNLHAPEWSGEVRN 115 (153)
Q Consensus 101 iL~fyAPgW~gEVR~ 115 (153)
++.||+| ||+.|+.
T Consensus 25 lv~f~~~-~C~~C~~ 38 (109)
T 3tco_A 25 LVDCWAE-WCAPCHL 38 (109)
T ss_dssp EEEEECT-TCHHHHH
T ss_pred EEEEECC-CCHHHHh
Confidence 6778876 8877654
No 64
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=39.39 E-value=32 Score=24.31 Aligned_cols=34 Identities=21% Similarity=0.213 Sum_probs=23.0
Q ss_pred ceeeeeeeEEEeeCCcEEEEEEEEEEEecccc--eeeeccce
Q 047987 108 EWSGEVRNITYSVDGKTVSVVYRVTIYGTDAE--VTSNSVNI 147 (153)
Q Consensus 108 gW~gEVR~i~ys~dGksVsVvyRVTi~GtDge--~~REATGT 147 (153)
+-.+.|.++.|++||+.+ + -=|.||. +++=+|||
T Consensus 304 ~h~~~v~~l~~s~dg~~l-~-----sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 304 AEPPQCTSLAWSADGQTL-F-----AGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp CCCCCEEEEEECTTSSEE-E-----EEETTSCEEEEEEEC--
T ss_pred CCCCCEEEEEECCCCCEE-E-----EEeCCCEEEEEeCCCcC
Confidence 345779999999999844 2 2467885 46777776
No 65
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=38.98 E-value=3.1 Score=28.62 Aligned_cols=14 Identities=21% Similarity=0.776 Sum_probs=10.1
Q ss_pred hhhhccCceeeeeee
Q 047987 101 IMNLHAPEWSGEVRN 115 (153)
Q Consensus 101 iL~fyAPgW~gEVR~ 115 (153)
++.||+| ||+.|+.
T Consensus 36 vv~F~a~-wC~~C~~ 49 (153)
T 2wz9_A 36 VVHFWAP-WAPQCAQ 49 (153)
T ss_dssp EEEEECT-TCHHHHH
T ss_pred EEEEECC-CCHhHHH
Confidence 6778876 8887654
No 66
>1vh5_A Hypothetical protein YDII; PSI, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; 1.34A {Escherichia coli} SCOP: d.38.1.5 PDB: 1vi8_A 1sbk_A
Probab=38.50 E-value=29 Score=24.10 Aligned_cols=47 Identities=17% Similarity=0.189 Sum_probs=30.2
Q ss_pred hhhccCceeeeeeeEE-EeeCCcEEEEEEEEEEEecccceeeeccceec
Q 047987 102 MNLHAPEWSGEVRNIT-YSVDGKTVSVVYRVTIYGTDAEVTSNSVNILL 149 (153)
Q Consensus 102 L~fyAPgW~gEVR~i~-ys~dGksVsVvyRVTi~GtDge~~REATGT~~ 149 (153)
++|.+|.-.|+|+-.. ....|+++ ++++++|+..||+..=+++||..
T Consensus 89 i~fl~p~~~G~l~a~a~v~~~gr~~-~~~~~~v~~~~g~lvA~a~~t~~ 136 (148)
T 1vh5_A 89 ANHVRSAREGRVRGVCKPLHLGSRH-QVWQIEIFDEKGRLCCSSRLTTA 136 (148)
T ss_dssp EEECSCCCSSEEEEEEEEEEECSSE-EEEEEEEECTTSCEEEEEEEEEE
T ss_pred EEEEcCCCCCEEEEEEEEEEcCCCE-EEEEEEEEeCCCCEEEEEEEEEE
Confidence 4677777766543211 11224445 77899999889998877777653
No 67
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=38.05 E-value=3.1 Score=26.87 Aligned_cols=14 Identities=14% Similarity=0.809 Sum_probs=9.9
Q ss_pred hhhhccCceeeeeee
Q 047987 101 IMNLHAPEWSGEVRN 115 (153)
Q Consensus 101 iL~fyAPgW~gEVR~ 115 (153)
++.|||| ||+.|+.
T Consensus 41 vv~f~a~-wC~~C~~ 54 (124)
T 1faa_A 41 VLDMFTQ-WCGPCKA 54 (124)
T ss_dssp EEEEECT-TCHHHHH
T ss_pred EEEEECC-cCHhHHH
Confidence 6778875 8887653
No 68
>2nwi_A Hypothetical protein; structural genomics, unknown function, PSI-2, protein structure initiative; 2.20A {Archaeoglobus fulgidus} SCOP: d.190.1.3
Probab=37.73 E-value=61 Score=22.40 Aligned_cols=61 Identities=13% Similarity=0.194 Sum_probs=33.8
Q ss_pred hhHHHHHHHhcccCCcccccccccCCccccccchhhhhhhhhh-ccCceeeeeeeEEEeeCCcEEEEEEEEEEE
Q 047987 62 RPLSEILKELNKNVPNSLIKIRVEDGFSMKYIPWHIVNRIMNL-HAPEWSGEVRNITYSVDGKTVSVVYRVTIY 134 (153)
Q Consensus 62 RPLaEILrdLnKrVPD~lvktr~~~g~s~~yIPWy~anRiL~f-yAPgW~gEVR~i~ys~dGksVsVvyRVTi~ 134 (153)
+||-++|++.+..+-..+-... .. .+.-...+.|+. .+|-| +|...|..||+- +-|-..+.
T Consensus 96 ~sl~~~L~~~~~~~~~~~~~i~------~~-~a~~~~a~~L~~~~~pll---~rr~~~~~~g~p--i~y~~e~f 157 (172)
T 2nwi_A 96 IPIGKIMRKHNIEARREIRWSR------VE-EADLALAKELGIADRRVI---SRNYNIIHRGKV--LINITEFF 157 (172)
T ss_dssp SCHHHHHHHTTCCBEEEEEEEE------EE-ECCHHHHHHHTCSSCEEE---EEEEEEEETTEE--EEEEEEEE
T ss_pred CCHHHHHHHCCchheehhhhee------cc-cCCHHHHHHhCCCCCCee---eEEEEEEECCEE--EEEEEEEc
Confidence 6888888885433322211111 11 122234577774 45557 788999999964 44444443
No 69
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=37.48 E-value=3.3 Score=27.41 Aligned_cols=13 Identities=38% Similarity=0.854 Sum_probs=9.2
Q ss_pred hhhhccCceeeeee
Q 047987 101 IMNLHAPEWSGEVR 114 (153)
Q Consensus 101 iL~fyAPgW~gEVR 114 (153)
++.|||| ||+-|+
T Consensus 50 vv~f~a~-wC~~C~ 62 (139)
T 3d22_A 50 LANFSAR-WCGPSR 62 (139)
T ss_dssp EEEEECT-TCHHHH
T ss_pred EEEEECC-CCHHHH
Confidence 6778884 887664
No 70
>3e29_A Uncharacterized protein Q7WE92_borbr; Q7WE92 NESG, structural genomics, PSI-2, Pro structure initiative; 2.40A {Bordetella bronchiseptica} SCOP: d.38.1.0
Probab=37.06 E-value=32 Score=23.75 Aligned_cols=47 Identities=15% Similarity=0.229 Sum_probs=30.6
Q ss_pred hhhccCceeeeeeeEE-EeeCCcEEEEEEEEEEEecccceeeeccceec
Q 047987 102 MNLHAPEWSGEVRNIT-YSVDGKTVSVVYRVTIYGTDAEVTSNSVNILL 149 (153)
Q Consensus 102 L~fyAPgW~gEVR~i~-ys~dGksVsVvyRVTi~GtDge~~REATGT~~ 149 (153)
++|..|.-.|+|+-.. ....|+++ .++++.|+..||++.=.++||-.
T Consensus 85 i~fl~p~~~g~l~~~a~v~~~gr~~-~~~~~~i~~~~g~~va~a~~tf~ 132 (144)
T 3e29_A 85 VDYHRVATPGDLRAEGQVIHFGKRF-ATAHARVLDMDGNLVASGRALYL 132 (144)
T ss_dssp EEECSCCCSSCEEEEEEEEEECSSE-EEEEEEEEETTCCEEEEEEEEEE
T ss_pred EEEecCCCCcEEEEEEEEEEeCCcE-EEEEEEEEeCCCCEEEEEEEEEE
Confidence 4566777666553221 11235555 77899999999998877777643
No 71
>3f5o_A Thioesterase superfamily member 2; hotdog fold, hydrolase; HET: UOC COA P6G; 1.70A {Homo sapiens} SCOP: d.38.1.5 PDB: 2f0x_A* 2cy9_A
Probab=36.50 E-value=39 Score=23.09 Aligned_cols=48 Identities=17% Similarity=0.228 Sum_probs=32.1
Q ss_pred hhhccCceeee-e--eeEEEeeCCcEEEEEEEEEEEec-ccceeeeccceeccc
Q 047987 102 MNLHAPEWSGE-V--RNITYSVDGKTVSVVYRVTIYGT-DAEVTSNSVNILLLI 151 (153)
Q Consensus 102 L~fyAPgW~gE-V--R~i~ys~dGksVsVvyRVTi~Gt-Dge~~REATGT~~l~ 151 (153)
++|..|.-.|+ | +.-+.. -|+++ ++++++|+-. ||++.=.+++|-.+-
T Consensus 88 i~fl~p~~~G~~l~~~a~v~~-~g~~~-~~~~~~i~~~~~g~lva~a~~t~~~~ 139 (148)
T 3f5o_A 88 ITYMSPAKLGEDIVITAHVLK-QGKTL-AFTSVDLTNKATGKLIAQGRHTKHLG 139 (148)
T ss_dssp EEECSCCBTTCEEEEEEEEEE-ECSSE-EEEEEEEEETTTCCEEEEEEEEEECC
T ss_pred EEEeCCCCCCCEEEEEEEEEE-cCCeE-EEEEEEEEECCCCeEEEEEEEEEEcc
Confidence 56777877674 2 222222 24444 6788999987 899998888886543
No 72
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=36.45 E-value=3.9 Score=33.48 Aligned_cols=16 Identities=25% Similarity=0.715 Sum_probs=12.6
Q ss_pred hhhhhccCceeeeeeeE
Q 047987 100 RIMNLHAPEWSGEVRNI 116 (153)
Q Consensus 100 RiL~fyAPgW~gEVR~i 116 (153)
=++.|||| |||-|+.+
T Consensus 379 vlv~F~a~-wC~~C~~~ 394 (504)
T 2b5e_A 379 VLVLYYAP-WCGHCKRL 394 (504)
T ss_dssp EEEEEECT-TCHHHHHH
T ss_pred EEEEEECC-CChhHHHH
Confidence 37899996 99988654
No 73
>3s4k_A Putative esterase RV1847/MT1895; seattle structural genomics center for infectious disease, S hydrolase; 1.70A {Mycobacterium tuberculosis} SCOP: d.38.1.0
Probab=36.16 E-value=44 Score=23.10 Aligned_cols=47 Identities=19% Similarity=0.127 Sum_probs=30.5
Q ss_pred hhhccCceeeeeee--EEEeeCCcEEEEEEEEEEEecccceeeeccceecc
Q 047987 102 MNLHAPEWSGEVRN--ITYSVDGKTVSVVYRVTIYGTDAEVTSNSVNILLL 150 (153)
Q Consensus 102 L~fyAPgW~gEVR~--i~ys~dGksVsVvyRVTi~GtDge~~REATGT~~l 150 (153)
++|..|.-.|+|+- .+.. -|+++ .++++.|+..||++.=++++|-.+
T Consensus 91 i~fl~p~~~g~l~~~a~v~~-~gr~~-~~~~~~i~~~~g~lvA~a~~t~~~ 139 (144)
T 3s4k_A 91 TDFVRSISSGMVYGTAEPLH-RGRRQ-QLWLVTITDDTDRVVARGQVRLQN 139 (144)
T ss_dssp EEECCCCCSEEEEEEEEEEE-ECSSE-EEEEEEEECTTSCEEEEEEEEEEE
T ss_pred EEEECCCCCCEEEEEEEEEE-cCCCE-EEEEEEEEcCCCCEEEEEEEEEEE
Confidence 45667776664432 1222 35555 668999999999998777777543
No 74
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=36.04 E-value=3.8 Score=30.09 Aligned_cols=14 Identities=21% Similarity=0.729 Sum_probs=10.2
Q ss_pred hhhhccCceeeeeee
Q 047987 101 IMNLHAPEWSGEVRN 115 (153)
Q Consensus 101 iL~fyAPgW~gEVR~ 115 (153)
++.|||| ||+-|+.
T Consensus 34 vv~F~a~-wC~~C~~ 47 (222)
T 3dxb_A 34 LVDFWAE-WCGPCKM 47 (222)
T ss_dssp EEEEECT-TCHHHHH
T ss_pred EEEEECC-cCHHHHH
Confidence 6778876 8887654
No 75
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=36.01 E-value=3.6 Score=27.71 Aligned_cols=14 Identities=21% Similarity=0.589 Sum_probs=9.6
Q ss_pred hhhhccCceeeeeee
Q 047987 101 IMNLHAPEWSGEVRN 115 (153)
Q Consensus 101 iL~fyAPgW~gEVR~ 115 (153)
++.|||| ||+.|+.
T Consensus 41 vv~F~a~-wC~~C~~ 54 (125)
T 1r26_A 41 VAWFTAV-WCGPCKT 54 (125)
T ss_dssp EEEEECT-TCHHHHH
T ss_pred EEEEECC-cCHhHHH
Confidence 5677876 8876643
No 76
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=35.97 E-value=3.4 Score=25.47 Aligned_cols=13 Identities=23% Similarity=0.879 Sum_probs=8.9
Q ss_pred hhhhccCceeeeee
Q 047987 101 IMNLHAPEWSGEVR 114 (153)
Q Consensus 101 iL~fyAPgW~gEVR 114 (153)
++.||+| ||+.|+
T Consensus 24 ~v~f~~~-~C~~C~ 36 (105)
T 3m9j_A 24 VVDFSAT-WCGPCK 36 (105)
T ss_dssp EEEEECT-TCHHHH
T ss_pred EEEEECC-CChhhH
Confidence 5677775 777664
No 77
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=35.59 E-value=3.6 Score=25.81 Aligned_cols=14 Identities=21% Similarity=0.762 Sum_probs=9.2
Q ss_pred hhhhccCceeeeeee
Q 047987 101 IMNLHAPEWSGEVRN 115 (153)
Q Consensus 101 iL~fyAPgW~gEVR~ 115 (153)
++.||+| ||+.|+.
T Consensus 28 vv~f~~~-~C~~C~~ 41 (112)
T 1ep7_A 28 VVDFTAT-WCGPCKM 41 (112)
T ss_dssp EEEEECT-TCHHHHH
T ss_pred EEEEECC-CCHHHHH
Confidence 6677775 7776643
No 78
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=35.37 E-value=5.7 Score=25.52 Aligned_cols=15 Identities=40% Similarity=0.871 Sum_probs=10.6
Q ss_pred hhhhccCceeeeeeeE
Q 047987 101 IMNLHAPEWSGEVRNI 116 (153)
Q Consensus 101 iL~fyAPgW~gEVR~i 116 (153)
++.||+| ||+-|+.+
T Consensus 40 vv~f~~~-~C~~C~~~ 54 (130)
T 1wmj_A 40 IIDFTAS-WCGPCRFI 54 (130)
T ss_dssp BEECCSS-SCSCSSSS
T ss_pred EEEEECC-CChhHHHH
Confidence 5678875 88887653
No 79
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=35.31 E-value=3.6 Score=27.51 Aligned_cols=14 Identities=29% Similarity=0.719 Sum_probs=10.7
Q ss_pred hhhhccCceeeeeee
Q 047987 101 IMNLHAPEWSGEVRN 115 (153)
Q Consensus 101 iL~fyAPgW~gEVR~ 115 (153)
++.|||| ||+.|+.
T Consensus 42 lv~f~a~-wC~~C~~ 55 (136)
T 2l5l_A 42 IVDFYAD-WCGPCKM 55 (136)
T ss_dssp EEEEECT-TSHHHHH
T ss_pred EEEEECC-cCHHHHH
Confidence 7888886 8887754
No 80
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=35.11 E-value=24 Score=26.93 Aligned_cols=18 Identities=50% Similarity=0.853 Sum_probs=14.8
Q ss_pred ceeeeeeeEEEeeCCcEE
Q 047987 108 EWSGEVRNITYSVDGKTV 125 (153)
Q Consensus 108 gW~gEVR~i~ys~dGksV 125 (153)
+=.++|.++.||+||+.+
T Consensus 174 ~~~~~V~~v~fspdg~~l 191 (365)
T 4h5i_A 174 ETRGEVKDLHFSTDGKVV 191 (365)
T ss_dssp ECSSCCCEEEECTTSSEE
T ss_pred CCCCceEEEEEccCCceE
Confidence 345789999999999855
No 81
>3dkz_A Thioesterase superfamily protein; Q7W9W5, borpa, PF03061, NESG, BPR208C, structural genomics, PSI-2, protein structure initiative; 2.40A {Bordetella parapertussis}
Probab=34.99 E-value=38 Score=23.32 Aligned_cols=47 Identities=13% Similarity=0.216 Sum_probs=31.1
Q ss_pred hhhccCceeeeeeeEE-EeeCCcEEEEEEEEEEEecccceeeeccceecc
Q 047987 102 MNLHAPEWSGEVRNIT-YSVDGKTVSVVYRVTIYGTDAEVTSNSVNILLL 150 (153)
Q Consensus 102 L~fyAPgW~gEVR~i~-ys~dGksVsVvyRVTi~GtDge~~REATGT~~l 150 (153)
++|..|.- |+|+-.. ....|+++ +++++.|+..||++.=.++||-.+
T Consensus 81 i~fl~p~~-g~l~~~a~v~~~gr~~-~~~~~~v~~~~g~lva~a~~t~~~ 128 (142)
T 3dkz_A 81 TSFMSPGR-GDLVIETRCLRRGASI-AFCEGEIRDSAGELVAKATATFKI 128 (142)
T ss_dssp EEECSCCC-SCEEEEEEEEEECSSE-EEEEEEEEETTCCEEEEEEEEEEE
T ss_pred EEEecCCC-CeEEEEEEEEEcCCcE-EEEEEEEEeCCCCEEEEEEEEEEE
Confidence 35667776 6643211 12236555 778999998899998888887544
No 82
>1vh9_A P15, hypothetical protein YBDB; structural genomics, unknown function; 2.15A {Escherichia coli} SCOP: d.38.1.5
Probab=34.81 E-value=35 Score=23.82 Aligned_cols=46 Identities=13% Similarity=0.180 Sum_probs=29.9
Q ss_pred hhhccCceeeeeee--EEEeeCCcEEEEEEEEEEEecccceeeeccceec
Q 047987 102 MNLHAPEWSGEVRN--ITYSVDGKTVSVVYRVTIYGTDAEVTSNSVNILL 149 (153)
Q Consensus 102 L~fyAPgW~gEVR~--i~ys~dGksVsVvyRVTi~GtDge~~REATGT~~ 149 (153)
++|..|.-.|+|+- -+.. .|+++ ++++++|+..||+..=+++||-.
T Consensus 89 i~fl~p~~~G~l~a~a~v~~-~gr~~-~~~~~~v~~~~g~lvA~a~~t~~ 136 (149)
T 1vh9_A 89 ATHHRPVSEGKVRGVCQPLH-LGRQN-QSWEIVVFDEQGRRCCTCRLGTA 136 (149)
T ss_dssp EEECSCCCSSEEEEEEEEEE-ECSSE-EEEEEEEECTTSCEEEEEEEEEE
T ss_pred EEEEcCCCCcEEEEEEEEEE-CCCCE-EEEEEEEEeCCCCEEEEEEEEEE
Confidence 46777777665432 1222 24444 77889999889998877777653
No 83
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=34.78 E-value=3.7 Score=25.43 Aligned_cols=14 Identities=29% Similarity=0.795 Sum_probs=9.8
Q ss_pred hhhhccCceeeeeee
Q 047987 101 IMNLHAPEWSGEVRN 115 (153)
Q Consensus 101 iL~fyAPgW~gEVR~ 115 (153)
++.||+| ||+.|+.
T Consensus 21 ~v~f~~~-~C~~C~~ 34 (105)
T 1nsw_A 21 LVDFWAA-WCGPCRM 34 (105)
T ss_dssp EEEEECT-TCHHHHH
T ss_pred EEEEECC-CCHHHHH
Confidence 6778875 7876653
No 84
>3gek_A Putative thioesterase YHDA; structure genomics, NESG, KR113, Q9CHK5_lacla, lactococcus L YHDA, structural genomics, PSI-2; 2.24A {Lactococcus lactis subsp}
Probab=34.53 E-value=40 Score=24.34 Aligned_cols=48 Identities=21% Similarity=0.205 Sum_probs=32.8
Q ss_pred hhhccCce-eeeeeeEE-EeeCCcEEEEEEEEEEEecccceeeeccceecc
Q 047987 102 MNLHAPEW-SGEVRNIT-YSVDGKTVSVVYRVTIYGTDAEVTSNSVNILLL 150 (153)
Q Consensus 102 L~fyAPgW-~gEVR~i~-ys~dGksVsVvyRVTi~GtDge~~REATGT~~l 150 (153)
.+|..|+- .|+|+-.. ..--|+++ .+++++|+..||++.=.++||-.+
T Consensus 81 i~flrpa~~~g~l~a~a~v~~~Gr~~-~~~~v~i~d~~g~lvA~a~~t~~i 130 (146)
T 3gek_A 81 ANHLNPKKCEGFVNARGLLLKNGKRN-HVWEIKITDENETLISQITVVNAL 130 (146)
T ss_dssp EEECSCCBSSSEEEEEEEEEEECSSE-EEEEEEEEETTCCEEEEEEEEEEE
T ss_pred EEEcccCCCCcEEEEEEEEEECCCcE-EEEEEEEEeCCCCEEEEEEEEEEE
Confidence 46777776 56554321 12236666 789999999999998888887644
No 85
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=34.36 E-value=4.4 Score=26.85 Aligned_cols=16 Identities=6% Similarity=0.335 Sum_probs=13.0
Q ss_pred hhhhccCc------eeeeeeeE
Q 047987 101 IMNLHAPE------WSGEVRNI 116 (153)
Q Consensus 101 iL~fyAPg------W~gEVR~i 116 (153)
++.||||+ ||+.|+.+
T Consensus 28 ~v~F~a~~~~~~~~wC~~C~~~ 49 (123)
T 1wou_A 28 FAYFTGSKDAGGKSWCPDCVQA 49 (123)
T ss_dssp EEEEECCBCTTCCBSCHHHHHH
T ss_pred EEEEEccCCCCCCCcCHHHHHh
Confidence 68999995 99987654
No 86
>1yoc_A Hypothetical protein PA1835; structural genomics, PSI, protein structure initiati midwest center for structural genomics, MCSG, sulfur SAD; 1.70A {Pseudomonas aeruginosa} SCOP: d.38.1.5
Probab=33.77 E-value=69 Score=22.29 Aligned_cols=46 Identities=17% Similarity=0.156 Sum_probs=31.9
Q ss_pred hhhccCceeeeeeeEEEe-eCC---cEEEEEEEEEEEecccceeeeccceecc
Q 047987 102 MNLHAPEWSGEVRNITYS-VDG---KTVSVVYRVTIYGTDAEVTSNSVNILLL 150 (153)
Q Consensus 102 L~fyAPgW~gEVR~i~ys-~dG---ksVsVvyRVTi~GtDge~~REATGT~~l 150 (153)
.+|..|+- |+++-...- ..| +++ ++++++|+..| ++.=++++|.-+
T Consensus 95 i~ylrp~~-g~l~a~a~v~~~g~~~r~~-~~~~~~v~~~~-~lvA~a~~t~~v 144 (147)
T 1yoc_A 95 VEYLAKAT-GDVRAVADGSQIDWQATGN-LVVPVVAYVDD-KPVFRAEITMYV 144 (147)
T ss_dssp EEECSCCC-SCEEEEEECTTSCTTCCEE-EEEEEEEEETT-EEEEEEEEEEEE
T ss_pred EEEeccCC-CcEEEEEEEcccccccceE-EEEEEEEEECC-EEEEEEEEEEEE
Confidence 46778887 777655433 345 654 88999999888 877777776543
No 87
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=33.73 E-value=4.3 Score=26.38 Aligned_cols=15 Identities=7% Similarity=-0.046 Sum_probs=10.5
Q ss_pred hhhhhccCceeeeeee
Q 047987 100 RIMNLHAPEWSGEVRN 115 (153)
Q Consensus 100 RiL~fyAPgW~gEVR~ 115 (153)
-++.|||| ||+-|+.
T Consensus 29 ~lv~f~a~-wC~~C~~ 43 (126)
T 2l57_A 29 TIIMFKTD-TCPYCVE 43 (126)
T ss_dssp EEEEEECS-SCHHHHH
T ss_pred EEEEEECC-CCccHHH
Confidence 36788876 8887653
No 88
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=33.33 E-value=4.1 Score=26.02 Aligned_cols=14 Identities=29% Similarity=0.833 Sum_probs=9.3
Q ss_pred hhhhccCceeeeeee
Q 047987 101 IMNLHAPEWSGEVRN 115 (153)
Q Consensus 101 iL~fyAPgW~gEVR~ 115 (153)
++.||+| ||+.|+.
T Consensus 30 lv~f~a~-~C~~C~~ 43 (112)
T 1syr_A 30 IVDFFAE-WCGPCKR 43 (112)
T ss_dssp EEEEECT-TCHHHHH
T ss_pred EEEEECC-CCHHHHH
Confidence 5677776 7776643
No 89
>2hpw_A Green fluorescent protein; GFP, structural genomics, PSI, protein initiative; HET: CSY; 1.55A {Clytia gregaria}
Probab=33.26 E-value=42 Score=27.59 Aligned_cols=28 Identities=25% Similarity=0.439 Sum_probs=20.5
Q ss_pred cCc-eeeeeeeEEEeeCCcEEEEEEEEEEEe
Q 047987 106 APE-WSGEVRNITYSVDGKTVSVVYRVTIYG 135 (153)
Q Consensus 106 APg-W~gEVR~i~ys~dGksVsVvyRVTi~G 135 (153)
.|+ .++| |.+.|= ||..+++.+++|+.|
T Consensus 87 fpeGyswe-Rt~~fE-DGGv~t~~~~itleg 115 (233)
T 2hpw_A 87 QPDGYSQD-RIISFD-NDGQYDVKAKVTYEN 115 (233)
T ss_dssp TTTCEEEE-EEEEET-TSCEEEEEEEEEEET
T ss_pred CCCceeEE-EEEEEc-CCcEEEEEEEEEEEC
Confidence 465 6766 777776 555788888888876
No 90
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=33.19 E-value=4.1 Score=25.36 Aligned_cols=14 Identities=21% Similarity=0.729 Sum_probs=10.1
Q ss_pred hhhhccCceeeeeee
Q 047987 101 IMNLHAPEWSGEVRN 115 (153)
Q Consensus 101 iL~fyAPgW~gEVR~ 115 (153)
++.||+| ||+.|+.
T Consensus 24 ~v~f~~~-~C~~C~~ 37 (108)
T 2trx_A 24 LVDFWAE-WCGPCKM 37 (108)
T ss_dssp EEEEECT-TCHHHHH
T ss_pred EEEEECC-CCHhHHH
Confidence 6778885 8887654
No 91
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=32.86 E-value=4.2 Score=25.57 Aligned_cols=14 Identities=29% Similarity=0.864 Sum_probs=9.9
Q ss_pred hhhhccCceeeeeee
Q 047987 101 IMNLHAPEWSGEVRN 115 (153)
Q Consensus 101 iL~fyAPgW~gEVR~ 115 (153)
++.||+| ||+-|+.
T Consensus 27 vv~f~~~-~C~~C~~ 40 (112)
T 1t00_A 27 LVDFWAA-WCGPCRQ 40 (112)
T ss_dssp EEEEECT-TCHHHHH
T ss_pred EEEEECC-CCHhHHh
Confidence 6788875 8876643
No 92
>1xmz_A ASCP595, GFP-like chromoprotein FP595; fluorescent protein, chromophore structure, lumines protein; HET: CRK; 1.38A {Anemonia sulcata} PDB: 1xqm_A*
Probab=32.54 E-value=46 Score=27.53 Aligned_cols=28 Identities=32% Similarity=0.527 Sum_probs=20.2
Q ss_pred cCc-eeeeeeeEEEeeCCcEEEEEEEEEEEe
Q 047987 106 APE-WSGEVRNITYSVDGKTVSVVYRVTIYG 135 (153)
Q Consensus 106 APg-W~gEVR~i~ys~dGksVsVvyRVTi~G 135 (153)
.|+ .++| |.+.|= ||..+++.+++|+.|
T Consensus 93 fpeGyswe-Rt~~fE-DGGv~t~~~~isleg 121 (241)
T 1xmz_A 93 FPEGFTWE-RTTTYE-DGGFLTAHQDTSLDG 121 (241)
T ss_dssp TTTCEEEE-EEEEET-TSCEEEEEEEEEEET
T ss_pred CCCCeeEE-EEEEEC-CCcEEEEEEEEEEEC
Confidence 565 6766 777776 555788888888876
No 93
>2ib5_A Chromo protein, cjblue; beta barrel, alpha helix, chromophore, luminescent protein; HET: CRQ; 1.80A {Cnidopus japonicus} PDB: 2ib6_A*
Probab=32.42 E-value=47 Score=27.33 Aligned_cols=28 Identities=29% Similarity=0.498 Sum_probs=20.2
Q ss_pred cCc-eeeeeeeEEEeeCCcEEEEEEEEEEEe
Q 047987 106 APE-WSGEVRNITYSVDGKTVSVVYRVTIYG 135 (153)
Q Consensus 106 APg-W~gEVR~i~ys~dGksVsVvyRVTi~G 135 (153)
.|| .++| |.+.|= ||..+++.+++|+.|
T Consensus 85 fpeGyswe-Rt~~fE-DGGv~t~~~~isleg 113 (233)
T 2ib5_A 85 FPEGFTWE-RTTIYE-DGAYLTTQQETKLDG 113 (233)
T ss_dssp TTTCEEEE-EEEEET-TSCEEEEEEEEEEET
T ss_pred CCCCeeEE-EEEEEC-CCcEEEEEEEEEEEC
Confidence 565 6666 777776 555788888888876
No 94
>2gw3_A Kaede; beta barrel, luminescent protein; HET: CR8; 1.40A {Trachyphyllia geoffroyi} PDB: 1zux_A* 3s05_A* 3p8u_A* 3tmr_A* 3tmt_A* 2vvh_A* 2vvi_A* 2vvj_A* 2btj_A* 2gw4_B* 2ddc_A* 2ddd_A* 2ie2_A* 2z1o_A* 2z6y_A* 2gx2_A* 2gx0_A* 3ls3_A* 3lsa_A* 1xss_A* ...
Probab=32.18 E-value=48 Score=27.11 Aligned_cols=28 Identities=29% Similarity=0.533 Sum_probs=20.3
Q ss_pred cCc-eeeeeeeEEEeeCCcEEEEEEEEEEEe
Q 047987 106 APE-WSGEVRNITYSVDGKTVSVVYRVTIYG 135 (153)
Q Consensus 106 APg-W~gEVR~i~ys~dGksVsVvyRVTi~G 135 (153)
.|+ .++| |.+.|= ||..+++.+++|+.|
T Consensus 83 fpeGyswe-Rt~~fE-DGGv~t~~~~i~leg 111 (225)
T 2gw3_A 83 FPKGFSWE-RSLMFE-DGGVCIATNDITLKG 111 (225)
T ss_dssp TTTCEEEE-EEEEET-TSCEEEEEEEEEEET
T ss_pred CCCCceEE-EEEEEC-CCcEEEEEEEEEEEC
Confidence 565 6766 777776 555788888888876
No 95
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=32.07 E-value=5.2 Score=31.56 Aligned_cols=14 Identities=0% Similarity=-0.057 Sum_probs=11.2
Q ss_pred hhhhccCceeeeeee
Q 047987 101 IMNLHAPEWSGEVRN 115 (153)
Q Consensus 101 iL~fyAPgW~gEVR~ 115 (153)
+++|||| ||+.|+.
T Consensus 137 vV~Fya~-wC~~Ck~ 150 (245)
T 1a0r_P 137 VVHIYED-GIKGCDA 150 (245)
T ss_dssp EEEEECT-TSTTHHH
T ss_pred EEEEECC-CChHHHH
Confidence 7899996 9987754
No 96
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=31.80 E-value=4.6 Score=26.47 Aligned_cols=14 Identities=21% Similarity=0.738 Sum_probs=9.3
Q ss_pred hhhhccCceeeeeee
Q 047987 101 IMNLHAPEWSGEVRN 115 (153)
Q Consensus 101 iL~fyAPgW~gEVR~ 115 (153)
++.||+| ||+.|+.
T Consensus 34 vv~F~a~-wC~~C~~ 47 (114)
T 2oe3_A 34 VIDFYAT-WCGPCKM 47 (114)
T ss_dssp EEEEECT-TCHHHHH
T ss_pred EEEEECC-CCHHHHH
Confidence 5677775 7776643
No 97
>2gj3_A Nitrogen fixation regulatory protein; PAS domain, FAD, redox sensor, atomic resolution, transferase; HET: FAD; 1.04A {Azotobacter vinelandii}
Probab=31.77 E-value=89 Score=19.00 Aligned_cols=32 Identities=19% Similarity=0.262 Sum_probs=20.7
Q ss_pred ceeeeeeeEEEeeCCcEEEEEEEEE-EEeccccee
Q 047987 108 EWSGEVRNITYSVDGKTVSVVYRVT-IYGTDAEVT 141 (153)
Q Consensus 108 gW~gEVR~i~ys~dGksVsVvyRVT-i~GtDge~~ 141 (153)
.|.+|++ ....||..+.+...++ ++..+|++.
T Consensus 75 ~~~~e~~--~~~~dG~~~~~~~~~~pi~~~~g~~~ 107 (120)
T 2gj3_A 75 PWSGVLV--NRRKDKTLYLAELTVAPVLNEAGETI 107 (120)
T ss_dssp CEEEEEE--EECTTSCEEEEEEEEEEEECTTSCEE
T ss_pred CEEEEEE--EEcCCCCEEEEEEEEEEEECCCCCEE
Confidence 4888884 4567887665554443 566777753
No 98
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=31.71 E-value=4.9 Score=29.04 Aligned_cols=15 Identities=13% Similarity=0.388 Sum_probs=11.7
Q ss_pred hhhhccCceeeeeeeE
Q 047987 101 IMNLHAPEWSGEVRNI 116 (153)
Q Consensus 101 iL~fyAPgW~gEVR~i 116 (153)
++.|||| ||+.|+.+
T Consensus 118 lv~F~a~-wC~~C~~~ 132 (210)
T 3apq_A 118 FVNFYSP-GCSHCHDL 132 (210)
T ss_dssp EEEEECT-TCHHHHHH
T ss_pred EEEEeCC-CChhHHHH
Confidence 6789997 99988653
No 99
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=31.63 E-value=4.7 Score=30.59 Aligned_cols=16 Identities=13% Similarity=0.029 Sum_probs=12.8
Q ss_pred hhhhhccCceeeeeeeE
Q 047987 100 RIMNLHAPEWSGEVRNI 116 (153)
Q Consensus 100 RiL~fyAPgW~gEVR~i 116 (153)
.++.|||| |||-|+.+
T Consensus 141 ~vv~F~a~-wC~~C~~~ 156 (243)
T 2hls_A 141 HIETIITP-SCPYCPYA 156 (243)
T ss_dssp EEEEEECS-SCSSHHHH
T ss_pred EEEEEECC-CCCCcHHH
Confidence 46789997 99988765
No 100
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=31.33 E-value=5 Score=26.00 Aligned_cols=13 Identities=15% Similarity=0.692 Sum_probs=7.2
Q ss_pred hhhhccCceeeeee
Q 047987 101 IMNLHAPEWSGEVR 114 (153)
Q Consensus 101 iL~fyAPgW~gEVR 114 (153)
++.||+| ||+-|+
T Consensus 31 lv~f~a~-wC~~C~ 43 (130)
T 2kuc_A 31 FVDCFTT-WCGPCK 43 (130)
T ss_dssp EEEECCT-TCTHHH
T ss_pred EEEEECC-CCccHH
Confidence 4566654 666543
No 101
>2lfw_B NEPR anti sigma factor; signal transduction, response regulator, sigma factor mimicr sigma factor, general stress response, signaling protein; NMR {Sphingomonas SP}
Probab=31.04 E-value=74 Score=21.69 Aligned_cols=45 Identities=7% Similarity=0.193 Sum_probs=27.2
Q ss_pred CCCCCCCcCCcCCCCCCCCCCCcchhHHHHHH-HhcccCCcccccc
Q 047987 38 SPAFSSSPETLNDENDAVPTSGISRPLSEILK-ELNKNVPNSLIKI 82 (153)
Q Consensus 38 ~~a~~~~~~~~~~~~~~vp~s~itRPLaEILr-dLnKrVPD~lvkt 82 (153)
++..+-+|+.....+...|.+.|-.-|-..-. -+.++|||+++.-
T Consensus 6 g~~~~~~p~~~~~~~~~~~~~~Ig~~LR~~Yd~vv~E~VPDrFldL 51 (62)
T 2lfw_B 6 GNKDKKASSKKSPAKVQSKDRDMGAALRSAYQKTIEEQVPDEMLDL 51 (62)
T ss_dssp CCCCCSCCSCCCCCCSSSSSTTHHHHHHHHHHTTTSSCCCCTTGGG
T ss_pred CCCCCCCCcccCCCCCcChHHHHHHHHHHHHHHHhccCCCHHHHHH
Confidence 44444444444334444556666666666665 3578999998764
No 102
>2c9i_A Green fluorescent protein ASFP499; beta-barrel, bioluminescence, luminescence, luminescent protein; HET: CRQ; 1.82A {Anemonia sulcata}
Probab=31.01 E-value=48 Score=27.15 Aligned_cols=28 Identities=36% Similarity=0.529 Sum_probs=20.3
Q ss_pred cCc-eeeeeeeEEEeeCCcEEEEEEEEEEEe
Q 047987 106 APE-WSGEVRNITYSVDGKTVSVVYRVTIYG 135 (153)
Q Consensus 106 APg-W~gEVR~i~ys~dGksVsVvyRVTi~G 135 (153)
.|+ .++| |.+.|= ||..+++.+++|+.|
T Consensus 82 fpeGyswe-Rt~~fE-DGGv~t~~~~i~leg 110 (226)
T 2c9i_A 82 LPGGFSWE-RVSTYE-DGGVLSATQETSLQG 110 (226)
T ss_dssp TTTCEEEE-EEEEET-TSCEEEEEEEEEEET
T ss_pred CCCCeeEE-EEEEEC-CCcEEEEEEEEEEEC
Confidence 565 6776 777776 555788888888876
No 103
>1yzw_A Hcred, GFP-like non-fluorescent chromoprotein; luminescent protein; HET: CRU; 2.10A {Heteractis crispa}
Probab=30.98 E-value=48 Score=27.16 Aligned_cols=28 Identities=32% Similarity=0.547 Sum_probs=20.6
Q ss_pred cCc-eeeeeeeEEEeeCCcEEEEEEEEEEEe
Q 047987 106 APE-WSGEVRNITYSVDGKTVSVVYRVTIYG 135 (153)
Q Consensus 106 APg-W~gEVR~i~ys~dGksVsVvyRVTi~G 135 (153)
.|+ .++| |.+.|= ||..+++.+++|+.|
T Consensus 82 fpeGyswe-Rt~~fE-DGGv~t~~~~i~leg 110 (225)
T 1yzw_A 82 FPEGFTWE-RTTTYE-DGGILTAHQDTSLEG 110 (225)
T ss_dssp TTTCEEEE-EEEEET-TSCEEEEEEEEEEET
T ss_pred CCCCceEE-EEEEEc-CCcEEEEEEEEEEEC
Confidence 565 7776 777776 555788888888876
No 104
>2hbo_A Hypothetical protein (NP_422103.1); thioesterase/thiol ester dehydrase-isomerase fold, structura genomics; HET: MSE PE4; 1.85A {Caulobacter vibrioides} SCOP: d.38.1.5
Probab=30.95 E-value=49 Score=22.98 Aligned_cols=45 Identities=11% Similarity=0.153 Sum_probs=27.7
Q ss_pred hhhccCceeee-eee--EEEeeCCcEEEEEEEEEEEecccceeeeccceec
Q 047987 102 MNLHAPEWSGE-VRN--ITYSVDGKTVSVVYRVTIYGTDAEVTSNSVNILL 149 (153)
Q Consensus 102 L~fyAPgW~gE-VR~--i~ys~dGksVsVvyRVTi~GtDge~~REATGT~~ 149 (153)
++|..|.-.|+ |+- -+.. .|+++ +++++.|+. ||++.=.++|+-.
T Consensus 93 i~fl~p~~~Gd~l~~~a~v~~-~g~~~-~~~~~~i~~-~g~lva~a~~t~~ 140 (158)
T 2hbo_A 93 CDFLSGAKLGDWVEGEGELIS-EEDML-FTVRGRIWA-GERTLITGTGVFK 140 (158)
T ss_dssp EEECSCCBTTCEEEEEEEEEE-EETTE-EEEEEEEEE-TTEEEEEEEEEEE
T ss_pred EEEecCCCCCCEEEEEEEEEE-eCCcE-EEEEEEEEE-CCEEEEEEEEEEE
Confidence 57888888775 321 1122 23333 667777777 8988777776643
No 105
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=30.73 E-value=5.3 Score=26.80 Aligned_cols=14 Identities=21% Similarity=0.731 Sum_probs=10.5
Q ss_pred hhhhccCceeeeeee
Q 047987 101 IMNLHAPEWSGEVRN 115 (153)
Q Consensus 101 iL~fyAPgW~gEVR~ 115 (153)
++.|||| ||+.|+.
T Consensus 44 lv~F~a~-wC~~C~~ 57 (128)
T 2o8v_B 44 LVDFWAE-WCGPAKM 57 (128)
T ss_dssp EEEEECS-SCHHHHH
T ss_pred EEEEECC-CCHHHHH
Confidence 6788887 8887754
No 106
>2c9j_A Green fluorescent protein FP512; beta-barrel, bioluminescence, luminescence, luminescent protein; HET: CRQ; 1.35A {Cerianthus membranaceus}
Probab=30.70 E-value=53 Score=26.79 Aligned_cols=28 Identities=25% Similarity=0.469 Sum_probs=19.9
Q ss_pred cCc-eeeeeeeEEEeeCCcEEEEEEEEEEEe
Q 047987 106 APE-WSGEVRNITYSVDGKTVSVVYRVTIYG 135 (153)
Q Consensus 106 APg-W~gEVR~i~ys~dGksVsVvyRVTi~G 135 (153)
.|+ .++| |.+.|= ||..+++.+++|+.|
T Consensus 81 fpeGyswe-Rt~~fE-DGGv~t~~~~isleg 109 (223)
T 2c9j_A 81 FPEAFQWN-RRIEFE-DGGVINMSSDITYKD 109 (223)
T ss_dssp TTTCEEEE-EEEEET-TSCEEEEEEEEEEET
T ss_pred CCCCeeEE-EEEEEC-CCcEEEEEEEEEEEC
Confidence 465 6666 777775 555788888888876
No 107
>2g6y_A Green fluorescent protein 2; natural chromophore, rapid matura beta-CAN, luminescent protein; HET: CR2; 1.60A {Pontellina plumata} PDB: 2g6x_A* 2g3o_A*
Probab=30.62 E-value=48 Score=26.93 Aligned_cols=27 Identities=19% Similarity=0.327 Sum_probs=20.4
Q ss_pred Cc-eeeeeeeEEEeeCCcEEEEEEEEEEEe
Q 047987 107 PE-WSGEVRNITYSVDGKTVSVVYRVTIYG 135 (153)
Q Consensus 107 Pg-W~gEVR~i~ys~dGksVsVvyRVTi~G 135 (153)
|| .++| |.+.|= ||..+++.+++|+.|
T Consensus 78 peGyswe-Rt~~fE-DGGv~t~~~~itleg 105 (217)
T 2g6y_A 78 NGGYTNT-RIEKYE-DGGVLHVSFSYRYEA 105 (217)
T ss_dssp TTCEEEE-EEEEET-TSCEEEEEEEEEEET
T ss_pred CCCceEE-EEEEEc-CCcEEEEEEEEEEEC
Confidence 64 7776 778886 555788888998876
No 108
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=30.57 E-value=5 Score=26.67 Aligned_cols=14 Identities=29% Similarity=0.795 Sum_probs=9.7
Q ss_pred hhhhccCceeeeeee
Q 047987 101 IMNLHAPEWSGEVRN 115 (153)
Q Consensus 101 iL~fyAPgW~gEVR~ 115 (153)
++.||+| ||+.|+.
T Consensus 42 vv~f~a~-wC~~C~~ 55 (124)
T 1xfl_A 42 VVDFTAS-WCGPCRF 55 (124)
T ss_dssp EEEEECT-TCHHHHH
T ss_pred EEEEECC-CCHHHHH
Confidence 5677874 8887653
No 109
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=30.24 E-value=5.1 Score=26.32 Aligned_cols=14 Identities=21% Similarity=0.790 Sum_probs=9.2
Q ss_pred hhhhccCceeeeeee
Q 047987 101 IMNLHAPEWSGEVRN 115 (153)
Q Consensus 101 iL~fyAPgW~gEVR~ 115 (153)
++.||+| ||+.|+.
T Consensus 27 lv~f~a~-wC~~C~~ 40 (118)
T 2f51_A 27 LVDFFAT-WCGPCQR 40 (118)
T ss_dssp EEEEECT-TCHHHHH
T ss_pred EEEEECC-CCHHHHH
Confidence 5667775 7776653
No 110
>3f1t_A Uncharacterized protein Q9I3C8_pseae; PAR319A, NESG, structural genomics, PSI-2, Pro structure initiative; HET: MSE; 2.20A {Pseudomonas aeruginosa}
Probab=30.17 E-value=56 Score=23.04 Aligned_cols=47 Identities=17% Similarity=0.218 Sum_probs=30.3
Q ss_pred hhhccCceee-eee--eEEEeeCCcEEEEEEEEEEEecc-cceeeeccceecc
Q 047987 102 MNLHAPEWSG-EVR--NITYSVDGKTVSVVYRVTIYGTD-AEVTSNSVNILLL 150 (153)
Q Consensus 102 L~fyAPgW~g-EVR--~i~ys~dGksVsVvyRVTi~GtD-ge~~REATGT~~l 150 (153)
++|..|.-.| +|+ --+.. -|+++ ++++++|+..| |++.=.++||-.+
T Consensus 88 v~flrp~~~G~~l~a~a~v~~-~gr~~-~~~~~~i~~~~~g~lvA~a~~t~~~ 138 (148)
T 3f1t_A 88 IDYMHPAEPHKDVYGFAECYR-VTPNV-IFTRGFAYQDDPGQPIAHVVGAFMR 138 (148)
T ss_dssp EEECSCCCTTSCEEEEEEEEE-ECSSE-EEEEEEEESSCTTSCSEEEEEEEEC
T ss_pred EEEecCCCCCCEEEEEEEEEe-ccCcE-EEEEEEEEECCCCcEEEEEEEEEEe
Confidence 3566777666 222 22222 36666 67899999886 9998888887543
No 111
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=30.04 E-value=9.5 Score=30.48 Aligned_cols=12 Identities=17% Similarity=0.249 Sum_probs=9.9
Q ss_pred hhhhccCceeeee
Q 047987 101 IMNLHAPEWSGEV 113 (153)
Q Consensus 101 iL~fyAPgW~gEV 113 (153)
++.|||| |||-+
T Consensus 34 lV~FyAp-WC~~~ 45 (367)
T 3us3_A 34 ALLYHEP-PEDDK 45 (367)
T ss_dssp EEEEECC-CCSSH
T ss_pred EEEEECC-CchhH
Confidence 6789996 99884
No 112
>3lbe_A Putative uncharacterized protein SMU.793; hypothetical protein, unknown function; HET: COA; 1.70A {Streptococcus mutans} PDB: 3lbb_A*
Probab=29.86 E-value=42 Score=24.32 Aligned_cols=46 Identities=17% Similarity=0.197 Sum_probs=29.9
Q ss_pred hhhccCceeee-ee--eEEEeeCCcEEEEEEEEEEEecccceeeeccceec
Q 047987 102 MNLHAPEWSGE-VR--NITYSVDGKTVSVVYRVTIYGTDAEVTSNSVNILL 149 (153)
Q Consensus 102 L~fyAPgW~gE-VR--~i~ys~dGksVsVvyRVTi~GtDge~~REATGT~~ 149 (153)
++|..|...|+ |+ --+.. -|+++ ++++++|+..||++.=.+++|-.
T Consensus 107 i~flrpv~~G~~l~a~a~v~~-~gr~~-~~~~~~i~~~~g~lvA~a~~t~~ 155 (163)
T 3lbe_A 107 INYLKSGKLGDTLLIDGRCVH-DGRTT-KVVDVTVTNQLKQEVAKATFTMF 155 (163)
T ss_dssp EEECSCCCTTCEEEEEEEEEE-ECSSE-EEEEEEEECTTCCEEEEEEEEEE
T ss_pred EEEecCCCCCCEEEEEEEEEE-cCCcE-EEEEEEEEeCCCCEEEEEEEEEE
Confidence 45777877673 22 22222 25545 67889999889999877777653
No 113
>2a46_A GFP-like fluorescent chromoprotein AMFP486; beta barrel, luminescent protein; HET: CR7; 1.65A {Anemonia majano} PDB: 2a48_A* 2a47_A*
Probab=29.65 E-value=56 Score=27.02 Aligned_cols=28 Identities=32% Similarity=0.629 Sum_probs=20.2
Q ss_pred cCc-eeeeeeeEEEeeCCcEEEEEEEEEEEe
Q 047987 106 APE-WSGEVRNITYSVDGKTVSVVYRVTIYG 135 (153)
Q Consensus 106 APg-W~gEVR~i~ys~dGksVsVvyRVTi~G 135 (153)
.|+ .++| |.+.|= ||..+++.+++++.|
T Consensus 98 fpeGyswe-Rt~~fE-DGGv~t~~~~isleg 126 (238)
T 2a46_A 98 FPDGMSYE-RTFTYE-DGGVATASWEISLKG 126 (238)
T ss_dssp TTTCEEEE-EEEEET-TSCEEEEEEEEEEET
T ss_pred CCCCceEE-EEEEEC-CCcEEEEEEEEEEEC
Confidence 465 6766 777776 555788888888876
No 114
>2fs2_A Phenylacetic acid degradation protein PAAI; operon, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: d.38.1.5 PDB: 1psu_A
Probab=29.47 E-value=46 Score=23.12 Aligned_cols=46 Identities=15% Similarity=0.266 Sum_probs=30.1
Q ss_pred hhhccCceeee-eee--EEEeeCCcEEEEEEEEEEEecccceeeeccceec
Q 047987 102 MNLHAPEWSGE-VRN--ITYSVDGKTVSVVYRVTIYGTDAEVTSNSVNILL 149 (153)
Q Consensus 102 L~fyAPgW~gE-VR~--i~ys~dGksVsVvyRVTi~GtDge~~REATGT~~ 149 (153)
++|.+|.-.|+ |+- -+.. -|+++ ++++++|+..||+..=++++|-.
T Consensus 83 i~fl~Pv~~Gd~l~~~a~v~~-~gr~~-~~~~~~i~~~~g~lva~a~~t~~ 131 (151)
T 2fs2_A 83 IDFLRPGFAGDTLTATAQVRH-QGKQT-GVYDIEIVNQQQKTVALFRGKSH 131 (151)
T ss_dssp EEECSCCBTTCEEEEEEEEEE-ECSSE-EEEEEEEECTTSCEEEEEEEEEE
T ss_pred EEEecCCCCCCEEEEEEEEEE-cCCcE-EEEEEEEEeCCCCEEEEEEEEEE
Confidence 67888988783 321 1222 24444 77888888888988777776643
No 115
>4i82_A Putative uncharacterized protein; PAAI/YDII-like, hot DOG fold, thioesterase, hydrolase; 2.50A {Streptococcus pneumoniae}
Probab=29.08 E-value=48 Score=22.38 Aligned_cols=46 Identities=13% Similarity=0.198 Sum_probs=29.7
Q ss_pred hhhccCceeee-e--eeEEEeeCCcEEEEEEEEEEEecccceeeeccceec
Q 047987 102 MNLHAPEWSGE-V--RNITYSVDGKTVSVVYRVTIYGTDAEVTSNSVNILL 149 (153)
Q Consensus 102 L~fyAPgW~gE-V--R~i~ys~dGksVsVvyRVTi~GtDge~~REATGT~~ 149 (153)
++|..|.-.|+ | +--+.. -|++. +++++.|+..||++.=++++|--
T Consensus 76 i~fl~p~~~g~~l~~~a~v~~-~g~~~-~~~~~~v~~~~g~lva~a~~t~~ 124 (137)
T 4i82_A 76 INYLKAGKLDDVLTIKGECVH-QGRTT-CVMDVDITNQEGRNVCKATFTMF 124 (137)
T ss_dssp EEECSCCBTTCEEEEEEEEEE-ECSSE-EEEEEEEECTTSCEEEEEEEEEE
T ss_pred EEEecccCCCCEEEEEEEEEE-eCCcE-EEEEEEEEcCCCcEEEEEEEEEE
Confidence 56778887773 2 222222 24444 67788888889998877777643
No 116
>2p8g_A PAD, phenolic acid decarboxylase; 2635953, phenolic acid decarboxylase (PAD), structural genom joint center for structural genomics, JCSG; 1.36A {Bacillus subtilis} PDB: 3nad_A
Probab=29.06 E-value=36 Score=27.08 Aligned_cols=21 Identities=19% Similarity=0.457 Sum_probs=13.7
Q ss_pred ccCceeeeeeeEEEeeCCcEEEEEEEE
Q 047987 105 HAPEWSGEVRNITYSVDGKTVSVVYRV 131 (153)
Q Consensus 105 yAPgW~gEVR~i~ys~dGksVsVvyRV 131 (153)
|+.||.+|+ -.++ .+ +|+|||
T Consensus 14 YdngW~YE~--y~kn--~~--tidYrI 34 (162)
T 2p8g_A 14 YENGWEYEI--YIKN--DH--TIDYRI 34 (162)
T ss_dssp CTTCCEEEE--EEEE--TT--EEEEEE
T ss_pred cCCCcEEEE--EEec--CC--EEEEEE
Confidence 778999997 3333 32 267775
No 117
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=29.04 E-value=5.6 Score=24.80 Aligned_cols=14 Identities=14% Similarity=0.574 Sum_probs=9.6
Q ss_pred hhhhccCceeeeeee
Q 047987 101 IMNLHAPEWSGEVRN 115 (153)
Q Consensus 101 iL~fyAPgW~gEVR~ 115 (153)
++.||+| ||+.|+.
T Consensus 30 vv~f~~~-~C~~C~~ 43 (113)
T 1ti3_A 30 VVDFTAS-WCPPCKM 43 (113)
T ss_dssp EEEEECS-SCHHHHH
T ss_pred EEEEECC-CCHHHHH
Confidence 5677775 7877653
No 118
>1z24_A Insecticyanin A form; blue biliprotein, INS-A, chromophore binding., lipid binding protein; HET: BLV; 2.60A {Manduca sexta} SCOP: b.60.1.1
Probab=28.92 E-value=67 Score=23.10 Aligned_cols=49 Identities=14% Similarity=0.180 Sum_probs=30.4
Q ss_pred chhhhhhhhhhccCceeeeeeeEEEe--eCCcEEEEEEEEEEEecccceeeeccceecc
Q 047987 94 PWHIVNRIMNLHAPEWSGEVRNITYS--VDGKTVSVVYRVTIYGTDAEVTSNSVNILLL 150 (153)
Q Consensus 94 PWy~anRiL~fyAPgW~gEVR~i~ys--~dGksVsVvyRVTi~GtDge~~REATGT~~l 150 (153)
-||.+.|.=+.+-.+ +.++...|+ +|| |.|.++-.. ||. ..++.|++..
T Consensus 26 ~WYeia~~~~~~~~~--~~c~~a~y~~~~dg--i~V~~~~~~---~g~-~~~~~g~~~~ 76 (189)
T 1z24_A 26 AWHEIAKLPLENENQ--GKCTIAEYKYDGKK--ASVYNSFVS---NGV-KEYMEGDLEI 76 (189)
T ss_dssp EEEEEEECCCGGGTT--CEEEEEEEEECSSC--EEEEEEEEE---TTE-EEEEEEEEEE
T ss_pred EeEEEEeeccccccC--ceeEEEEEEECCCC--EEEEEEEEe---CCC-EEEEEEEEEE
Confidence 388887764433332 567777776 455 878777432 554 3667777654
No 119
>2pbc_A FK506-binding protein 2; endoplasmic reticulum, isomerase, polymorphism, rotamase, structural genomics, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=28.91 E-value=52 Score=21.44 Aligned_cols=24 Identities=17% Similarity=0.284 Sum_probs=19.1
Q ss_pred eCCcEEEEEEEEEEEecccceeeecc
Q 047987 120 VDGKTVSVVYRVTIYGTDAEVTSNSV 145 (153)
Q Consensus 120 ~dGksVsVvyRVTi~GtDge~~REAT 145 (153)
.+|+.|+|.|..++ .||+.+-++.
T Consensus 7 ~~gd~V~v~y~~~~--~dG~~~d~s~ 30 (102)
T 2pbc_A 7 RKGDVLHMHYTGKL--EDGTEFDSSL 30 (102)
T ss_dssp CTTCEEEEEEEEEC--TTSCEEEEST
T ss_pred CCCCEEEEEEEEEE--CCCCEEEeCC
Confidence 36888999999887 6898877654
No 120
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=28.82 E-value=5.3 Score=24.52 Aligned_cols=13 Identities=23% Similarity=0.912 Sum_probs=8.9
Q ss_pred hhhhccCceeeeee
Q 047987 101 IMNLHAPEWSGEVR 114 (153)
Q Consensus 101 iL~fyAPgW~gEVR 114 (153)
++.||+| ||+.|+
T Consensus 24 vv~f~~~-~C~~C~ 36 (106)
T 1xwb_A 24 VLDFFAT-WCGPCK 36 (106)
T ss_dssp EEEEECT-TCHHHH
T ss_pred EEEEECC-cCHHHH
Confidence 6677775 777664
No 121
>2dd7_A Green fluorescent protein; luminescent protein; HET: CR2 CXS; 1.90A {Chiridius poppei} PDB: 2dd9_A*
Probab=28.81 E-value=49 Score=26.91 Aligned_cols=27 Identities=26% Similarity=0.369 Sum_probs=20.6
Q ss_pred C-ceeeeeeeEEEeeCCcEEEEEEEEEEEe
Q 047987 107 P-EWSGEVRNITYSVDGKTVSVVYRVTIYG 135 (153)
Q Consensus 107 P-gW~gEVR~i~ys~dGksVsVvyRVTi~G 135 (153)
| |.++| |.+.|= ||..+++.+++|+.|
T Consensus 75 peGyswe-Rt~~fE-DGGv~t~~~~itleg 102 (216)
T 2dd7_A 75 NGGYTNT-RKEIYE-DGGILEVNFRYTYEF 102 (216)
T ss_dssp TTCEEEE-EEEEET-TSCEEEEEEEEEEET
T ss_pred CCceeEE-EEEEEC-CCcEEEEEEEEEEEC
Confidence 6 47777 778886 555788999999876
No 122
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=28.80 E-value=7.7 Score=25.71 Aligned_cols=42 Identities=19% Similarity=0.297 Sum_probs=23.6
Q ss_pred HhcccCCcc-cccccccCCccccccchhhhhhhhhhccCceeeeeee
Q 047987 70 ELNKNVPNS-LIKIRVEDGFSMKYIPWHIVNRIMNLHAPEWSGEVRN 115 (153)
Q Consensus 70 dLnKrVPD~-lvktr~~~g~s~~yIPWy~anRiL~fyAPgW~gEVR~ 115 (153)
.+.+.+|+. -+.. .+| .+..=-.-.-.-+|.||| .||+-|+.
T Consensus 3 ~~~~~~P~~f~l~~--~~g-~~~l~~~~gk~vll~F~a-~wC~~C~~ 45 (146)
T 1o8x_A 3 GLDKYLPGIEKLRR--GDG-EVEVKSLAGKLVFFYFSA-SWCPPARG 45 (146)
T ss_dssp CGGGTSTTCCEEEE--TTE-EEEGGGGTTCEEEEEEEC-TTCHHHHH
T ss_pred chHhhCCCceEEEc--CCC-CCcHHHhCCCEEEEEEEc-cCCHHHHH
Confidence 367788883 2222 244 433322222234899999 59998754
No 123
>2hqk_A CYAN fluorescent chromoprotein; 11-stranded beta barrel, luminescent protein; HET: PIA; 1.19A {Clavularia SP} PDB: 2ote_A* 2otb_A* 2vzx_A* 3adf_A* 2gw4_A*
Probab=28.70 E-value=56 Score=26.64 Aligned_cols=28 Identities=32% Similarity=0.463 Sum_probs=20.3
Q ss_pred cCc-eeeeeeeEEEeeCCcEEEEEEEEEEEe
Q 047987 106 APE-WSGEVRNITYSVDGKTVSVVYRVTIYG 135 (153)
Q Consensus 106 APg-W~gEVR~i~ys~dGksVsVvyRVTi~G 135 (153)
.|+ .++| |.+.|= ||..+++.+++++.|
T Consensus 80 fpeGyswe-Rt~~fE-DGGv~t~~~~i~leg 108 (219)
T 2hqk_A 80 FPEGYSWE-RTMTFE-DKGIVKVKSDISMEE 108 (219)
T ss_dssp TTTCEEEE-EEEEET-TSCEEEEEEEEEEET
T ss_pred CCCCceEE-EEEEEC-CCcEEEEEEEEEEEC
Confidence 565 6776 777776 555788888888876
No 124
>2rh7_A Green fluorescent protein; HET: CRO; 1.50A {Renilla reniformis} SCOP: d.22.1.1
Probab=28.60 E-value=54 Score=27.12 Aligned_cols=28 Identities=39% Similarity=0.586 Sum_probs=19.9
Q ss_pred cCc-eeeeeeeEEEeeCCcEEEEEEEEEEEe
Q 047987 106 APE-WSGEVRNITYSVDGKTVSVVYRVTIYG 135 (153)
Q Consensus 106 APg-W~gEVR~i~ys~dGksVsVvyRVTi~G 135 (153)
.|+ .++| |.+.|= ||..+++.+++|+.|
T Consensus 85 fpeGyswe-Rt~~fE-DGGv~t~~~~isleg 113 (239)
T 2rh7_A 85 FPEGFTYE-RNIRYQ-DGGTAIVKSDISLED 113 (239)
T ss_dssp TTTCEEEE-EEEEET-TSCEEEEEEEEEEC-
T ss_pred CCCCceEE-EEEEEC-CCcEEEEEEEEEEEC
Confidence 465 7776 777776 555788888888876
No 125
>3cgl_A GFP-like fluorescent chromoprotein DSFP483; beta barrel, chromophore, luminescence, photoprotein, fluore protein; HET: CRQ; 2.09A {Discosoma striata}
Probab=28.60 E-value=55 Score=27.14 Aligned_cols=28 Identities=25% Similarity=0.592 Sum_probs=20.4
Q ss_pred cCc-eeeeeeeEEEeeCCcEEEEEEEEEEEe
Q 047987 106 APE-WSGEVRNITYSVDGKTVSVVYRVTIYG 135 (153)
Q Consensus 106 APg-W~gEVR~i~ys~dGksVsVvyRVTi~G 135 (153)
.|+ .++| |.+.|= ||..+++.+++|+.|
T Consensus 96 fpeGyswe-Rt~~fE-DGGv~t~~~~isleg 124 (241)
T 3cgl_A 96 FPEGYTWE-RSMHFE-DGGLCCITNDISLTG 124 (241)
T ss_dssp TTTCEEEE-EEEEET-TSCEEEEEEEEEEET
T ss_pred CCCCceEE-EEEEEC-CCcEEEEEEEEEEEC
Confidence 565 6776 777776 555788888888876
No 126
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=34.68 E-value=12 Score=22.57 Aligned_cols=16 Identities=38% Similarity=0.889 Sum_probs=11.2
Q ss_pred hhhhhccCceeeeeeeE
Q 047987 100 RIMNLHAPEWSGEVRNI 116 (153)
Q Consensus 100 RiL~fyAPgW~gEVR~i 116 (153)
-++.||+| ||+.|+..
T Consensus 22 ~~v~f~~~-~C~~C~~~ 37 (106)
T 2yj7_A 22 VLVDFWAP-WCGPCRMI 37 (106)
Confidence 37788864 88877654
No 127
>1rwu_A Hypothetical UPF0250 protein YBED; mixed alpha-beta fold, structural genomics, protein structure initiative, PSI; NMR {Escherichia coli} SCOP: d.58.54.1
Probab=27.96 E-value=29 Score=25.07 Aligned_cols=37 Identities=22% Similarity=0.318 Sum_probs=24.8
Q ss_pred hhhhhhhccCc-eeeeeeeEEEeeCCcEEEEEEEEEEEecc
Q 047987 98 VNRIMNLHAPE-WSGEVRNITYSVDGKTVSVVYRVTIYGTD 137 (153)
Q Consensus 98 anRiL~fyAPg-W~gEVR~i~ys~dGksVsVvyRVTi~GtD 137 (153)
+..++.-|||| ..- .+--|.+||-++|...|++...|
T Consensus 53 V~~vv~~~~p~d~~~---~~r~Ss~GkY~Svtv~v~v~S~e 90 (109)
T 1rwu_A 53 VVEVVQRHAPGDYTP---TVKPSSKGNYHSVSITINATHIE 90 (109)
T ss_dssp HHHHHHHHSSSCCCE---EEEESSCSSEEEEEEEECCSSHH
T ss_pred HHHHHHHhCCCCCCc---eecCCCCCeEEEEEEEEEECCHH
Confidence 45677778884 433 44568999988877766655443
No 128
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=27.96 E-value=5.7 Score=24.97 Aligned_cols=13 Identities=38% Similarity=0.981 Sum_probs=8.6
Q ss_pred hhhhccCceeeeee
Q 047987 101 IMNLHAPEWSGEVR 114 (153)
Q Consensus 101 iL~fyAPgW~gEVR 114 (153)
++.||+| ||+.|+
T Consensus 32 vv~f~~~-~C~~C~ 44 (118)
T 2vm1_A 32 IIDFTAS-WCGPCR 44 (118)
T ss_dssp EEEEECT-TCHHHH
T ss_pred EEEEECC-CCHhHH
Confidence 5667774 777664
No 129
>3nx2_A Ferulic acid decarboxylase; 4-vinylguaiacol, catalytic MECH phenolic acid decarboxylase superfamily, lyase; HET: FER; 2.01A {Enterobacter SP} PDB: 3nx1_A*
Probab=27.66 E-value=39 Score=27.00 Aligned_cols=21 Identities=19% Similarity=0.475 Sum_probs=13.9
Q ss_pred ccCceeeeeeeEEEeeCCcEEEEEEEE
Q 047987 105 HAPEWSGEVRNITYSVDGKTVSVVYRV 131 (153)
Q Consensus 105 yAPgW~gEVR~i~ys~dGksVsVvyRV 131 (153)
|+.||.+|+ -..+ .+ +|.|||
T Consensus 21 YdngW~YE~--y~kn--~~--~idYrI 41 (168)
T 3nx2_A 21 YDNGWNYEI--YVKN--DN--TIDYRI 41 (168)
T ss_dssp CTTCCEEEE--EEEE--TT--EEEEEE
T ss_pred cCCCcEEEE--EEec--CC--EEEEEE
Confidence 678999997 3333 33 367876
No 130
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=27.57 E-value=6 Score=25.71 Aligned_cols=14 Identities=29% Similarity=0.890 Sum_probs=9.3
Q ss_pred hhhhccCceeeeeee
Q 047987 101 IMNLHAPEWSGEVRN 115 (153)
Q Consensus 101 iL~fyAPgW~gEVR~ 115 (153)
++.||+| ||+.|+.
T Consensus 35 lv~f~a~-~C~~C~~ 48 (119)
T 1w4v_A 35 VVDFHAQ-WCGPCKI 48 (119)
T ss_dssp EEEEECT-TCHHHHH
T ss_pred EEEEECC-CCHHHHH
Confidence 5677765 7776653
No 131
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=27.54 E-value=10 Score=25.23 Aligned_cols=10 Identities=30% Similarity=1.019 Sum_probs=8.5
Q ss_pred hhhhccCceee
Q 047987 101 IMNLHAPEWSG 111 (153)
Q Consensus 101 iL~fyAPgW~g 111 (153)
++.|||| ||+
T Consensus 25 lv~F~a~-wC~ 34 (123)
T 1oaz_A 25 LVDFWAE-WCG 34 (123)
T ss_dssp EEEEECS-SCS
T ss_pred EEEEECC-CCc
Confidence 6789987 899
No 132
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=27.37 E-value=5.8 Score=24.25 Aligned_cols=13 Identities=23% Similarity=0.736 Sum_probs=8.8
Q ss_pred hhhhccCceeeeee
Q 047987 101 IMNLHAPEWSGEVR 114 (153)
Q Consensus 101 iL~fyAPgW~gEVR 114 (153)
++.||+| ||+.|+
T Consensus 22 lv~f~~~-~C~~C~ 34 (109)
T 2yzu_A 22 LVDFWAE-WCAPCR 34 (109)
T ss_dssp EEEEECT-TCHHHH
T ss_pred EEEEECC-CCHHHH
Confidence 5677766 777654
No 133
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=27.01 E-value=7.7 Score=27.62 Aligned_cols=15 Identities=0% Similarity=0.016 Sum_probs=10.6
Q ss_pred hhhhccCceeeeeee
Q 047987 101 IMNLHAPEWSGEVRN 115 (153)
Q Consensus 101 iL~fyAPgW~gEVR~ 115 (153)
|+.||+|.|||.|+.
T Consensus 26 lv~f~~~~~C~~C~~ 40 (226)
T 1a8l_A 26 LIVFVRKDHCQYCDQ 40 (226)
T ss_dssp EEEEECSSSCTTHHH
T ss_pred EEEEecCCCCchhHH
Confidence 466888878887643
No 134
>1q4t_A Thioesterase; hot-DOG, hydrolase; HET: 4CO; 1.60A {Arthrobacter SP} SCOP: d.38.1.5 PDB: 1q4s_A* 1q4u_A* 3r37_A* 3r36_B* 3r3d_A* 3r34_A* 3r35_A* 3r3f_A* 3r32_A* 3r3a_A* 3r3b_A* 3r3c_A*
Probab=26.99 E-value=58 Score=22.41 Aligned_cols=47 Identities=17% Similarity=0.193 Sum_probs=28.2
Q ss_pred hhhccCceeeeeeeEE-EeeCCcEEEEEEEEEEEecccceeeeccceec
Q 047987 102 MNLHAPEWSGEVRNIT-YSVDGKTVSVVYRVTIYGTDAEVTSNSVNILL 149 (153)
Q Consensus 102 L~fyAPgW~gEVR~i~-ys~dGksVsVvyRVTi~GtDge~~REATGT~~ 149 (153)
++|..|.-.|+|+-.. ....|+++ +++++.|+..||+..=++++|-.
T Consensus 98 i~fl~p~~~G~l~~~a~v~~~gr~~-~~~~~~i~~~~g~lva~a~~t~~ 145 (151)
T 1q4t_A 98 TSFFRPVKEGHVRAEAVRIHAGSTT-WFWDVSLRDDAGRLCAVSSMSIA 145 (151)
T ss_dssp EEESSCCCSSEEEEEEEEEEECSSE-EEEEEEEECTTCCEEEEEEEEEE
T ss_pred EEEECCCcCCEEEEEEEEEECCCCE-EEEEEEEEcCCCCEEEEEEEEEE
Confidence 4566676655443211 11224444 67788888888988877777643
No 135
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=26.73 E-value=7.2 Score=25.48 Aligned_cols=14 Identities=21% Similarity=0.771 Sum_probs=8.7
Q ss_pred hhhhccCceeeeeee
Q 047987 101 IMNLHAPEWSGEVRN 115 (153)
Q Consensus 101 iL~fyAPgW~gEVR~ 115 (153)
++.||+| ||+.|+.
T Consensus 37 vv~f~a~-~C~~C~~ 50 (121)
T 2j23_A 37 VIDFWAT-WCGPCKM 50 (121)
T ss_dssp EEEEECT-TCSTHHH
T ss_pred EEEEECC-CCHhHHH
Confidence 5667765 7776543
No 136
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=32.72 E-value=14 Score=24.73 Aligned_cols=15 Identities=27% Similarity=0.733 Sum_probs=11.8
Q ss_pred hhhhhccCceeeeeee
Q 047987 100 RIMNLHAPEWSGEVRN 115 (153)
Q Consensus 100 RiL~fyAPgW~gEVR~ 115 (153)
-++.|||+ ||+-|+.
T Consensus 36 vll~f~a~-~C~~C~~ 50 (159)
T 2ls5_A 36 VMLQFTAS-WCGVCRK 50 (159)
Confidence 48899964 9998865
No 137
>1t82_A Hypothetical acetyltransferase; structural genomics, alpha-beta dimeric protein with A fold resembling A hotdog, PSI; 1.70A {Shewanella oneidensis} SCOP: d.38.1.5
Probab=26.68 E-value=1e+02 Score=21.83 Aligned_cols=27 Identities=11% Similarity=0.178 Sum_probs=20.9
Q ss_pred CcEEEEEEEEEEEecccceeeeccceecc
Q 047987 122 GKTVSVVYRVTIYGTDAEVTSNSVNILLL 150 (153)
Q Consensus 122 GksVsVvyRVTi~GtDge~~REATGT~~l 150 (153)
|++ .++++|+|+-.|| ..=+++||-.+
T Consensus 125 gr~-~~~~~v~i~d~~g-lvA~~~~t~~i 151 (155)
T 1t82_A 125 RKA-KVKLEVQLFCDGK-LCAQFDGLYVS 151 (155)
T ss_dssp CCE-EEEEEEEEEETTE-EEEEEEEEEEE
T ss_pred Cce-EEEEEEEEEECCc-CEEEEEEEEEE
Confidence 764 5889999999888 87777777543
No 138
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=26.66 E-value=6.3 Score=24.99 Aligned_cols=14 Identities=21% Similarity=0.743 Sum_probs=9.7
Q ss_pred hhhhccCceeeeeee
Q 047987 101 IMNLHAPEWSGEVRN 115 (153)
Q Consensus 101 iL~fyAPgW~gEVR~ 115 (153)
++.||+| ||+.|+.
T Consensus 34 lv~f~~~-~C~~C~~ 47 (121)
T 2i1u_A 34 LVDFWAT-WCGPCKM 47 (121)
T ss_dssp EEEEECT-TCHHHHH
T ss_pred EEEEECC-CCHHHHH
Confidence 6778885 7876643
No 139
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=26.51 E-value=6.7 Score=27.42 Aligned_cols=14 Identities=36% Similarity=1.037 Sum_probs=9.5
Q ss_pred hhhhccCceeeeeee
Q 047987 101 IMNLHAPEWSGEVRN 115 (153)
Q Consensus 101 iL~fyAPgW~gEVR~ 115 (153)
++.|||| ||+.++.
T Consensus 68 lv~F~a~-wC~~C~~ 81 (155)
T 2ppt_A 68 LVDFWAP-WCGPCRQ 81 (155)
T ss_dssp EEEEECT-TCHHHHH
T ss_pred EEEEECC-CCHHHHH
Confidence 6778876 7776643
No 140
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=26.47 E-value=54 Score=25.51 Aligned_cols=18 Identities=39% Similarity=0.706 Sum_probs=15.1
Q ss_pred ceeeeeeeEEEeeCCcEE
Q 047987 108 EWSGEVRNITYSVDGKTV 125 (153)
Q Consensus 108 gW~gEVR~i~ys~dGksV 125 (153)
|=.++|..+.||+||+.+
T Consensus 14 GH~~~V~~~a~spdg~~l 31 (577)
T 2ymu_A 14 AHSSSVRGVAFSPDGQTI 31 (577)
T ss_dssp CCSSCEEEEEECTTSSCE
T ss_pred CCCCcEEEEEECCCCCEE
Confidence 446889999999999865
No 141
>4ayb_H DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2wb1_H 2y0s_H 2waq_H 4b1o_H 4b1p_Z 2pmz_H 3hkz_H
Probab=26.37 E-value=70 Score=22.27 Aligned_cols=26 Identities=27% Similarity=0.313 Sum_probs=18.6
Q ss_pred eeeeeeEEEeeCCcEEEEEEEEEEEe
Q 047987 110 SGEVRNITYSVDGKTVSVVYRVTIYG 135 (153)
Q Consensus 110 ~gEVR~i~ys~dGksVsVvyRVTi~G 135 (153)
.|+|..|+....----++.||+-|.|
T Consensus 59 ~GdVvkI~R~S~tag~~~~YR~vv~g 84 (84)
T 4ayb_H 59 PGDIIRIIRKSQLYGEVVSYRYVISG 84 (84)
T ss_dssp TTCEEEEEEEETTTEEEEEEEEEEC-
T ss_pred CCCEEEEEEcCCCCCccEEEEEEeCC
Confidence 38898888765433367999999876
No 142
>3tbm_A Putative uncharacterized protein; iron-sulfur, CDGSH, metal binding protein; HET: 2PE TLA; 1.80A {Ralstonia solanacearum}
Probab=26.14 E-value=40 Score=23.00 Aligned_cols=35 Identities=11% Similarity=-0.047 Sum_probs=26.9
Q ss_pred eeEEEeeCCcEEEEEEEEEEEecccceeeeccceec
Q 047987 114 RNITYSVDGKTVSVVYRVTIYGTDAEVTSNSVNILL 149 (153)
Q Consensus 114 R~i~ys~dGksVsVvyRVTi~GtDge~~REATGT~~ 149 (153)
+.|...+||- +-|..-|.|...||+.++...++..
T Consensus 8 ~~I~v~~nGP-l~V~G~v~i~~~dG~~~~~~~~~~~ 42 (69)
T 3tbm_A 8 VVITARNNGP-YHIKGSFRIVTQGGRELPVEQGQAW 42 (69)
T ss_dssp CEEEECTTSC-EEEESSCEEEESSCCEECCBTTEEE
T ss_pred eEEEEeCCCC-EEEECCCeEECCCCCEEeeCCCEEE
Confidence 4588899994 7788889999999999874444443
No 143
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=25.93 E-value=7.7 Score=24.94 Aligned_cols=14 Identities=0% Similarity=0.031 Sum_probs=9.4
Q ss_pred hhhhhccCceeeeee
Q 047987 100 RIMNLHAPEWSGEVR 114 (153)
Q Consensus 100 RiL~fyAPgW~gEVR 114 (153)
-++.||+ .||+-|+
T Consensus 32 ~lv~f~~-~~C~~C~ 45 (148)
T 2b5x_A 32 TLIHFWS-ISCHLCK 45 (148)
T ss_dssp EEEEEEC-TTCHHHH
T ss_pred EEEEEEc-CCCHHHH
Confidence 3677886 5787654
No 144
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=25.73 E-value=6.4 Score=29.25 Aligned_cols=17 Identities=18% Similarity=0.139 Sum_probs=12.4
Q ss_pred hhhhhccCce-eeeeeeE
Q 047987 100 RIMNLHAPEW-SGEVRNI 116 (153)
Q Consensus 100 RiL~fyAPgW-~gEVR~i 116 (153)
=++.|+|+-| ||+|+.+
T Consensus 37 vlVdF~a~~crCgpCk~i 54 (140)
T 2qgv_A 37 GVVLLSSDPKRTPEVSDN 54 (140)
T ss_dssp EEEEECCCTTTCTTTTHH
T ss_pred EEEEEeCCcccCCcHHHH
Confidence 3568888733 9999876
No 145
>2o9u_X Monellin chain B and monellin chain A; alternative conformations, 3-10 polyproline II helix, plant protein; 1.15A {Dioscoreophyllum cumminsii} SCOP: d.17.1.1 PDB: 3pxm_A 1m9g_A 3pyj_A 1fa3_A 1iv7_A 3q2p_A 1iv9_A 1mnl_A 1mol_A 1fuw_A 4mon_B 3mon_B 1krl_B 4mon_A 1krl_A 3mon_A 2q33_B* 2q33_A*
Probab=25.68 E-value=84 Score=22.57 Aligned_cols=24 Identities=21% Similarity=0.530 Sum_probs=16.8
Q ss_pred eEEEeeCCcE-E-EEEEEEEEEeccc
Q 047987 115 NITYSVDGKT-V-SVVYRVTIYGTDA 138 (153)
Q Consensus 115 ~i~ys~dGks-V-sVvyRVTi~GtDg 138 (153)
..+|...|++ | =..||+||..+||
T Consensus 45 ~~~~~~~~~~QVaG~nY~Ltlea~d~ 70 (97)
T 2o9u_X 45 KTIYENEGFREIKGYEYQLYVYASDK 70 (97)
T ss_dssp EEEECSSSSCSEEEEEEEEEEEETTE
T ss_pred cccccchhheeeccEEEEEEEEEeCC
Confidence 3466655532 2 2679999999998
No 146
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=25.63 E-value=7 Score=26.57 Aligned_cols=15 Identities=0% Similarity=-0.039 Sum_probs=12.1
Q ss_pred hhhhhccCceeeeeee
Q 047987 100 RIMNLHAPEWSGEVRN 115 (153)
Q Consensus 100 RiL~fyAPgW~gEVR~ 115 (153)
-+|.|||+ ||+-|+.
T Consensus 38 vll~F~a~-wC~~C~~ 52 (152)
T 2lrt_A 38 VLIDFTVY-NNAMSAA 52 (152)
T ss_dssp EEEEEECT-TCHHHHH
T ss_pred EEEEEEcC-CChhhHH
Confidence 38999985 9998763
No 147
>3kz7_A FK506-binding protein 3; FKPB ppiase rapamycin, isomerase, nucleus, phosphoprotein, R isomerase-inhibitor complex; HET: RAP; 1.95A {Mus musculus} SCOP: d.26.1.1 PDB: 1pbk_A*
Probab=25.61 E-value=60 Score=21.74 Aligned_cols=23 Identities=26% Similarity=0.424 Sum_probs=18.1
Q ss_pred CCcEEEEEEEEEEEecccceeeecc
Q 047987 121 DGKTVSVVYRVTIYGTDAEVTSNSV 145 (153)
Q Consensus 121 dGksVsVvyRVTi~GtDge~~REAT 145 (153)
+|+.|+|.|+.++ .||+++-++.
T Consensus 22 ~gd~V~v~Y~g~~--~dG~~fdss~ 44 (119)
T 3kz7_A 22 KGDVVHCWYTGTL--PDGTVFDTNI 44 (119)
T ss_dssp TTCEEEEEEEEEC--TTSCEEEECC
T ss_pred CCCEEEEEEEEEE--CCCCEEEecc
Confidence 5778999999887 6898876653
No 148
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=25.56 E-value=6.5 Score=23.71 Aligned_cols=13 Identities=15% Similarity=0.567 Sum_probs=7.9
Q ss_pred hhhhccCceeeeee
Q 047987 101 IMNLHAPEWSGEVR 114 (153)
Q Consensus 101 iL~fyAPgW~gEVR 114 (153)
++.||+| ||+.|+
T Consensus 20 ~v~f~~~-~C~~C~ 32 (104)
T 2e0q_A 20 VVDFWAE-WCAPCL 32 (104)
T ss_dssp EEEEECT-TCHHHH
T ss_pred EEEEECC-CChhHH
Confidence 5566664 676554
No 149
>2h4u_A Thioesterase superfamily member 2; structural genomics, structural genomics consortium, SGC, hydrolase; 2.20A {Homo sapiens} SCOP: d.38.1.5
Probab=25.33 E-value=1.1e+02 Score=20.91 Aligned_cols=47 Identities=15% Similarity=0.179 Sum_probs=29.7
Q ss_pred hhhccCceeee-eee-EEEeeCCcEEEEEEEEEEEec-ccceeeeccceec
Q 047987 102 MNLHAPEWSGE-VRN-ITYSVDGKTVSVVYRVTIYGT-DAEVTSNSVNILL 149 (153)
Q Consensus 102 L~fyAPgW~gE-VR~-i~ys~dGksVsVvyRVTi~Gt-Dge~~REATGT~~ 149 (153)
++|.+|.-.|+ |+- ......|+++ ++++++|+.. ||++.=++++|-.
T Consensus 93 i~fl~pv~~Gd~l~~~a~v~~~gr~~-~~~~~~i~~~~~g~lva~a~~t~~ 142 (145)
T 2h4u_A 93 ITYMSPAKLGEDIVITAHVLKQGKTL-AFTSVDLTNKATGKLIAQGRHTKH 142 (145)
T ss_dssp EEECSCCBTTCEEEEEEEEEEECSSE-EEEEEEEEETTTCCEEEEEEEEEE
T ss_pred EEEecCCCCCCEEEEEEEEEEcCCcE-EEEEEEEEECCCCeEEEEEEEEEE
Confidence 57888888775 321 1122234444 6778899886 8988766666543
No 150
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=25.31 E-value=6.7 Score=24.09 Aligned_cols=14 Identities=21% Similarity=0.729 Sum_probs=9.2
Q ss_pred hhhhccCceeeeeee
Q 047987 101 IMNLHAPEWSGEVRN 115 (153)
Q Consensus 101 iL~fyAPgW~gEVR~ 115 (153)
++.||+| ||+.|+.
T Consensus 24 lv~f~~~-~C~~C~~ 37 (107)
T 2i4a_A 24 LVDFWAE-WCGPCKM 37 (107)
T ss_dssp EEEEECT-TCHHHHH
T ss_pred EEEEECC-CChhHHH
Confidence 6777775 7776543
No 151
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=25.24 E-value=7.1 Score=26.02 Aligned_cols=14 Identities=50% Similarity=0.976 Sum_probs=11.0
Q ss_pred hhhhccCceeeeeee
Q 047987 101 IMNLHAPEWSGEVRN 115 (153)
Q Consensus 101 iL~fyAPgW~gEVR~ 115 (153)
+|.|||+ ||+-|+.
T Consensus 28 lv~F~a~-wC~~C~~ 41 (151)
T 3raz_A 28 IVNLWAT-WCGPCRK 41 (151)
T ss_dssp EEEEECT-TCHHHHH
T ss_pred EEEEEcC-cCHHHHH
Confidence 7899976 9997753
No 152
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=31.02 E-value=15 Score=23.66 Aligned_cols=15 Identities=20% Similarity=0.414 Sum_probs=12.3
Q ss_pred hhhhccCceeeeeeeE
Q 047987 101 IMNLHAPEWSGEVRNI 116 (153)
Q Consensus 101 iL~fyAPgW~gEVR~i 116 (153)
+|.||| .||+-|+..
T Consensus 30 ll~F~a-~wC~~C~~~ 44 (143)
T 2lus_A 30 GFYFSA-HWCPPCRGF 44 (143)
Confidence 889998 799988653
No 153
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=25.11 E-value=6.9 Score=24.25 Aligned_cols=13 Identities=38% Similarity=1.099 Sum_probs=8.8
Q ss_pred hhhhccCceeeeee
Q 047987 101 IMNLHAPEWSGEVR 114 (153)
Q Consensus 101 iL~fyAPgW~gEVR 114 (153)
++.||+| ||+-|+
T Consensus 23 lv~f~~~-~C~~C~ 35 (107)
T 1dby_A 23 LVDFWAP-WCGPCR 35 (107)
T ss_dssp EEEEECT-TCHHHH
T ss_pred EEEEECC-CCHhHH
Confidence 6777774 777654
No 154
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=25.07 E-value=7.2 Score=25.95 Aligned_cols=14 Identities=36% Similarity=0.966 Sum_probs=9.5
Q ss_pred hhhhccCceeeeeee
Q 047987 101 IMNLHAPEWSGEVRN 115 (153)
Q Consensus 101 iL~fyAPgW~gEVR~ 115 (153)
++.||+| ||+.++.
T Consensus 54 vv~f~~~-~C~~C~~ 67 (140)
T 1v98_A 54 LVDFFAP-WCGPCRL 67 (140)
T ss_dssp EEEEECT-TCHHHHH
T ss_pred EEEEECC-CCHHHHH
Confidence 6777877 7776543
No 155
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=24.93 E-value=12 Score=29.60 Aligned_cols=10 Identities=10% Similarity=0.677 Sum_probs=7.2
Q ss_pred hhhhc--cCceee
Q 047987 101 IMNLH--APEWSG 111 (153)
Q Consensus 101 iL~fy--APgW~g 111 (153)
++.|| || |||
T Consensus 37 lV~Fy~~Ap-WCg 48 (248)
T 2c0g_A 37 VVKFDIASP-YGE 48 (248)
T ss_dssp EEEEEESSC-CSH
T ss_pred EEEEECCCC-CCc
Confidence 56788 65 887
No 156
>1ixl_A Hypothetical protein PH1136; alpha+beta, hot-DOG-fold, structural genomics, unknown funct; 1.94A {Pyrococcus horikoshii} SCOP: d.38.1.5
Probab=24.61 E-value=99 Score=20.38 Aligned_cols=42 Identities=19% Similarity=0.256 Sum_probs=23.8
Q ss_pred hhhccCceeee-ee--eEEEeeCCcEEEEEEEEEEEecccceeeeccc
Q 047987 102 MNLHAPEWSGE-VR--NITYSVDGKTVSVVYRVTIYGTDAEVTSNSVN 146 (153)
Q Consensus 102 L~fyAPgW~gE-VR--~i~ys~dGksVsVvyRVTi~GtDge~~REATG 146 (153)
++|.+|..-|+ ++ --+..-.++. .+++++++ .||+..=+++.
T Consensus 75 i~f~~pv~~Gd~l~~~~~v~~~~~~~--~~~~~~v~-~~g~~va~g~~ 119 (131)
T 1ixl_A 75 VRFTKPVKVGDKLVAKAKIIEDLGKK--KIVEVKVY-REEEVVLEGKF 119 (131)
T ss_dssp EEECSCCBTTCEEEEEEEEEEEETTE--EEEEEEEE-ETTEEEEEEEE
T ss_pred EEECCCCCCCCEEEEEEEEEEecCcE--EEEEEEEE-ECCEEEEEEEE
Confidence 57889988886 32 1122223333 45566677 68887633333
No 157
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=24.48 E-value=8 Score=25.97 Aligned_cols=14 Identities=36% Similarity=1.070 Sum_probs=9.8
Q ss_pred hhhhccCceeeeeee
Q 047987 101 IMNLHAPEWSGEVRN 115 (153)
Q Consensus 101 iL~fyAPgW~gEVR~ 115 (153)
++.|||| ||+.++.
T Consensus 59 lv~F~a~-wC~~C~~ 72 (148)
T 3p2a_A 59 VIDFWAP-WCGPCRS 72 (148)
T ss_dssp EEEEECS-SCHHHHH
T ss_pred EEEEECC-CCHHHHH
Confidence 6778876 7876654
No 158
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=24.40 E-value=8.1 Score=25.17 Aligned_cols=16 Identities=13% Similarity=0.248 Sum_probs=12.3
Q ss_pred hhhhhccCceeeeeeeE
Q 047987 100 RIMNLHAPEWSGEVRNI 116 (153)
Q Consensus 100 RiL~fyAPgW~gEVR~i 116 (153)
=+|.|||+ ||+-|+..
T Consensus 30 vll~F~a~-~C~~C~~~ 45 (142)
T 3ewl_A 30 TMLFFYDP-DCSNCRKF 45 (142)
T ss_dssp EEEEECCS-SCHHHHHH
T ss_pred EEEEEECC-CCccHHHH
Confidence 37889975 99988664
No 159
>3f7x_A Putative polyketide cyclase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL; 1.24A {Pseudomonas putida KT2440}
Probab=24.20 E-value=1.5e+02 Score=20.38 Aligned_cols=24 Identities=17% Similarity=0.401 Sum_probs=11.3
Q ss_pred eeeeeeeEE--EeeCCcEEEEEEEEE
Q 047987 109 WSGEVRNIT--YSVDGKTVSVVYRVT 132 (153)
Q Consensus 109 W~gEVR~i~--ys~dGksVsVvyRVT 132 (153)
|..++.++. .+.||+.|.+.++++
T Consensus 76 ~~~~~~~~~~~~~~~gd~v~~~~~~~ 101 (151)
T 3f7x_A 76 YRERLADIVVMQNADGSRAAAEFTVH 101 (151)
T ss_dssp EEEEEEEEEEEECTTSSEEEEEEEEE
T ss_pred hccceeEEEEEEecCCCEEEEEEEEE
Confidence 444555443 235566554444444
No 160
>1zki_A Hypothetical protein PA5202; structural genomics, PSI, protein ST initiative, midwest center for structural genomics, MCSG, U function; 1.70A {Pseudomonas aeruginosa} SCOP: d.38.1.5
Probab=24.19 E-value=1.2e+02 Score=19.81 Aligned_cols=44 Identities=7% Similarity=0.044 Sum_probs=25.2
Q ss_pred hhhccCceeeeeeeE--EEeeCCcEEEEEEEEEEEecccceeeecccee
Q 047987 102 MNLHAPEWSGEVRNI--TYSVDGKTVSVVYRVTIYGTDAEVTSNSVNIL 148 (153)
Q Consensus 102 L~fyAPgW~gEVR~i--~ys~dGksVsVvyRVTi~GtDge~~REATGT~ 148 (153)
++|.+|.- |+.-.+ ....-|++. +++++.|+. ||+..=++++|-
T Consensus 83 i~fl~p~~-g~~l~~~a~v~~~g~~~-~~~~~~i~~-~g~~va~a~~~~ 128 (133)
T 1zki_A 83 INYIRAVA-DGEVRCVARVLHAGRRS-LVVEAEVRQ-GDKLVAKGQGTF 128 (133)
T ss_dssp EEECSCCC-SSEEEEEEEEEEECSSE-EEEEEEEEE-TTEEEEEEEEEE
T ss_pred EEEECcCC-CCEEEEEEEEEECCceE-EEEEEEEEE-CCEEEEEEEEEE
Confidence 56788887 642111 111224433 566777777 888876666654
No 161
>1hxv_A Trigger factor; FKBP fold, ppiase, chaperone; NMR {Mycoplasma genitalium} SCOP: d.26.1.1
Probab=23.67 E-value=57 Score=22.58 Aligned_cols=22 Identities=9% Similarity=0.261 Sum_probs=17.5
Q ss_pred eCCcEEEEEEEEEEEecccceeeec
Q 047987 120 VDGKTVSVVYRVTIYGTDAEVTSNS 144 (153)
Q Consensus 120 ~dGksVsVvyRVTi~GtDge~~REA 144 (153)
.+|+.|+|-|..++ ||+.+=++
T Consensus 31 ~~gD~V~v~Y~g~~---dG~~fdss 52 (113)
T 1hxv_A 31 ANGDIAIIDFTGIV---DNKKLASA 52 (113)
T ss_dssp CSSEEEEEEEEEEE---TTEECSTT
T ss_pred CCCCEEEEEEEEEE---CCEEcccC
Confidence 46889999999997 88876544
No 162
>1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae} SCOP: d.26.1.1
Probab=23.62 E-value=90 Score=20.72 Aligned_cols=24 Identities=25% Similarity=0.378 Sum_probs=18.6
Q ss_pred eCCcEEEEEEEEEEEecccceeeecc
Q 047987 120 VDGKTVSVVYRVTIYGTDAEVTSNSV 145 (153)
Q Consensus 120 ~dGksVsVvyRVTi~GtDge~~REAT 145 (153)
.+|+.|+|.|..++ .||+.+-++.
T Consensus 23 ~~gd~V~v~y~~~~--~dG~~~d~s~ 46 (113)
T 1yat_A 23 KTGDLVTIHYTGTL--ENGQKFDSSV 46 (113)
T ss_dssp CTTCEEEEEEEEEE--TTSCEEEEST
T ss_pred CCCCEEEEEEEEEE--CCCCEEEecC
Confidence 46788999999887 6898876654
No 163
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=23.44 E-value=16 Score=23.45 Aligned_cols=14 Identities=14% Similarity=0.278 Sum_probs=10.0
Q ss_pred hhhhccCceeeeeee
Q 047987 101 IMNLHAPEWSGEVRN 115 (153)
Q Consensus 101 iL~fyAPgW~gEVR~ 115 (153)
+|.||++ ||+-|+.
T Consensus 35 ll~f~~~-~C~~C~~ 48 (148)
T 3hcz_A 35 ILFFWDS-QCGHCQQ 48 (148)
T ss_dssp EEEEECG-GGCTTCS
T ss_pred EEEEECC-CCccHHH
Confidence 6788865 8887654
No 164
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=23.29 E-value=13 Score=25.99 Aligned_cols=44 Identities=11% Similarity=0.140 Sum_probs=22.1
Q ss_pred hcccCCcccccccccCCccccccchhhhhhhhhhccCceeeeeee
Q 047987 71 LNKNVPNSLIKIRVEDGFSMKYIPWHIVNRIMNLHAPEWSGEVRN 115 (153)
Q Consensus 71 LnKrVPD~lvktr~~~g~s~~yIPWy~anRiL~fyAPgW~gEVR~ 115 (153)
..+++||--+..-..++..+..--.-.-.-+|.||++ ||+-|+.
T Consensus 32 ~G~~~P~f~l~~~~g~~~~~~l~~~~gk~vll~F~a~-~C~~C~~ 75 (176)
T 3kh7_A 32 IGKPFPAFDLPSVQDPARRLTEADLKGKPALVNVWGT-WCPSCRV 75 (176)
T ss_dssp TTSBCCCCEEEBSSCTTSEEEGGGGCSSCEEEEEECT-TCHHHHH
T ss_pred cCCcCCCcEecccCCCCceecHHHhCCCEEEEEEECC-cCHHHHH
Confidence 4677787666543321222221111111238889965 9987643
No 165
>2pim_A Phenylacetic acid degradation-related protein; thioesterase superfamily, phenylacetic acid degradation-RELA protein; 2.20A {Ralstonia eutropha JMP134}
Probab=23.09 E-value=88 Score=20.90 Aligned_cols=46 Identities=13% Similarity=0.255 Sum_probs=28.8
Q ss_pred hhhccCceeeeeeeEE-EeeCCcEEEEEEEEEEEecccceeeeccceec
Q 047987 102 MNLHAPEWSGEVRNIT-YSVDGKTVSVVYRVTIYGTDAEVTSNSVNILL 149 (153)
Q Consensus 102 L~fyAPgW~gEVR~i~-ys~dGksVsVvyRVTi~GtDge~~REATGT~~ 149 (153)
++|..|.-.|+|+-.. ....|+++ +++++.| -.||+..=++++|-.
T Consensus 90 i~fl~p~~~g~l~~~a~v~~~g~~~-~~~~~~i-~~~g~~va~a~~t~~ 136 (141)
T 2pim_A 90 LSFLRPAQAGLLRGRARLERRGRNV-CNVVGEL-SQDGKLVATATATCM 136 (141)
T ss_dssp EEECSCCCSEEEEEEEEEEEECSSE-EEEEEEE-EETTEEEEEEEEEEE
T ss_pred EEEecCCCCCeEEEEEEEEEeCCcE-EEEEEEE-CCCCcEEEEEEEEEE
Confidence 5778888877743211 11224444 6677778 688988877776643
No 166
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=22.77 E-value=8.6 Score=25.99 Aligned_cols=14 Identities=29% Similarity=0.672 Sum_probs=11.1
Q ss_pred hhhhhccCceeeeee
Q 047987 100 RIMNLHAPEWSGEVR 114 (153)
Q Consensus 100 RiL~fyAPgW~gEVR 114 (153)
-++.||++ ||+-|+
T Consensus 54 vll~F~a~-~C~~C~ 67 (168)
T 2b1k_A 54 VLLNVWAT-WCPTCR 67 (168)
T ss_dssp EEEEEECT-TCHHHH
T ss_pred EEEEEECC-CCHHHH
Confidence 38899975 999775
No 167
>3i0y_A Putative polyketide cyclase; cystatin-like fold, structural genomics, joint center for ST genomics, JCSG, protein structure initiative; HET: MSE UNL; 1.50A {Xanthomonas campestris PV}
Probab=22.62 E-value=1.6e+02 Score=18.94 Aligned_cols=11 Identities=27% Similarity=0.428 Sum_probs=4.6
Q ss_pred eCCcEEEEEEE
Q 047987 120 VDGKTVSVVYR 130 (153)
Q Consensus 120 ~dGksVsVvyR 130 (153)
.||+.|.+.++
T Consensus 77 ~~gd~v~~~~~ 87 (140)
T 3i0y_A 77 DEGTRVGAEYV 87 (140)
T ss_dssp TTSSEEEEEEE
T ss_pred ccCCEEEEEEE
Confidence 34544433333
No 168
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=22.08 E-value=1e+02 Score=23.96 Aligned_cols=37 Identities=22% Similarity=0.463 Sum_probs=25.6
Q ss_pred eeeeeeEEEeeCCcEEEEE---EEEEEEecccceeeeccc
Q 047987 110 SGEVRNITYSVDGKTVSVV---YRVTIYGTDAEVTSNSVN 146 (153)
Q Consensus 110 ~gEVR~i~ys~dGksVsVv---yRVTi~GtDge~~REATG 146 (153)
.++|..+.|++||+.+-.. ..|.|.-.+|+..+...|
T Consensus 467 ~~~v~~~~~spd~~~las~~~d~~i~iw~~~~~~~~~~~~ 506 (577)
T 2ymu_A 467 SSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTG 506 (577)
T ss_dssp SSCEEEEEECTTSCEEEEEETTSEEEEEETTSCEEEEEEC
T ss_pred CCCEEEEEEcCCCCEEEEEeCCCEEEEEcCCCCEEEEEeC
Confidence 5789999999999865332 246666667776665544
No 169
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=22.05 E-value=11 Score=24.91 Aligned_cols=14 Identities=14% Similarity=0.496 Sum_probs=10.3
Q ss_pred hhhhhccCceeeeee
Q 047987 100 RIMNLHAPEWSGEVR 114 (153)
Q Consensus 100 RiL~fyAPgW~gEVR 114 (153)
-+|.||++ ||+-|+
T Consensus 33 vll~f~~~-~C~~C~ 46 (154)
T 3ia1_A 33 AVIVFWAS-WCTVCK 46 (154)
T ss_dssp EEEEEECT-TCHHHH
T ss_pred EEEEEEcc-cChhHH
Confidence 37888876 898664
No 170
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=21.94 E-value=9.6 Score=27.66 Aligned_cols=14 Identities=14% Similarity=-0.016 Sum_probs=10.4
Q ss_pred hhhhccCceeeeeee
Q 047987 101 IMNLHAPEWSGEVRN 115 (153)
Q Consensus 101 iL~fyAPgW~gEVR~ 115 (153)
|++||| .|||-|+.
T Consensus 48 lV~F~A-~WC~~Ck~ 61 (151)
T 3ph9_A 48 MVIHHL-EDCQYSQA 61 (151)
T ss_dssp EEEECC-TTCHHHHH
T ss_pred EEEEEC-CCCHhHHH
Confidence 578887 48887765
No 171
>3nqz_A MCP-02, secreted metalloprotease MCP02; autoprocessed complex, the thermolysin family, hydro; 2.05A {Pseudoalteromonas SP} PDB: 3nqy_A
Probab=21.89 E-value=1.2e+02 Score=22.54 Aligned_cols=29 Identities=21% Similarity=0.239 Sum_probs=22.2
Q ss_pred eeeEEEeeC-CcEEEEEEEEEEEecccceee
Q 047987 113 VRNITYSVD-GKTVSVVYRVTIYGTDAEVTS 142 (153)
Q Consensus 113 VR~i~ys~d-GksVsVvyRVTi~GtDge~~R 142 (153)
.+-++|-.+ |+ -.++|.|++.-.||+..|
T Consensus 130 ~~Lvv~~~~~g~-~~LaY~V~~~~~~~~p~~ 159 (180)
T 3nqz_A 130 SRLAIWVDDQNK-AHLVYEVSYVTYGKSPSR 159 (180)
T ss_dssp EEEEEEECTTSC-EEEEEEEEEEBCTTSCBC
T ss_pred ceEEEEECCCCC-EEEEEEEEEEecCCCCcc
Confidence 445888864 65 779999999988886655
No 172
>3bb9_A Putative orphan protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.80A {Shewanella frigidimarina} SCOP: d.17.4.16
Probab=21.84 E-value=1.9e+02 Score=19.41 Aligned_cols=33 Identities=6% Similarity=-0.003 Sum_probs=23.4
Q ss_pred CceeeeeeeEEEeeCCcEEEEEEEEEEEecc-cc
Q 047987 107 PEWSGEVRNITYSVDGKTVSVVYRVTIYGTD-AE 139 (153)
Q Consensus 107 PgW~gEVR~i~ys~dGksVsVvyRVTi~GtD-ge 139 (153)
+++..++.++...-+|+...|+++.++.|.+ |+
T Consensus 87 ~~~~~~~~~~~v~v~gd~A~~~~~~~~~~~~~G~ 120 (148)
T 3bb9_A 87 KGLTITPKEHQITITGDIAISTSISHAQGEYKGK 120 (148)
T ss_dssp HTEEEEEEEEEEEEETTEEEEEEEEEEEECCC--
T ss_pred cCceEEeeeEEEEEcCCEEEEEEEEEEeeeeCCc
Confidence 4478888887655567788888898888864 44
No 173
>3c5o_A UPF0311 protein RPA1785; beta-barrels, structural genomics, PSI-2, protein structure initiative; 2.20A {Rhodopseudomonas palustris}
Probab=21.83 E-value=1.6e+02 Score=21.74 Aligned_cols=46 Identities=15% Similarity=0.122 Sum_probs=30.2
Q ss_pred hccCceeeeeee-----EEEeeCCcEEEEEEEEEEEecccc-eeeeccceecc
Q 047987 104 LHAPEWSGEVRN-----ITYSVDGKTVSVVYRVTIYGTDAE-VTSNSVNILLL 150 (153)
Q Consensus 104 fyAPgW~gEVR~-----i~ys~dGksVsVvyRVTi~GtDge-~~REATGT~~l 150 (153)
|--|.++|+|.. ...-+|| ...+-.|-+|+-.||+ |+=+.+|...+
T Consensus 43 ~~Gp~l~G~vlpgG~D~~~~~~dg-~~~ldary~l~TdDGa~I~v~~~G~~~~ 94 (157)
T 3c5o_A 43 VKGEGISGQVLPFGADFQIIRPNE-LIELEAKYAFETDDGAVVYVENVGIRFG 94 (157)
T ss_dssp EEETTEEEEECSCCEEEEEECTTS-CEEEEEEEEEEETTCCEEEEEEEEEEEC
T ss_pred EECCcEEEEEecCcccEEEECCCC-CEEEEEEEEEEcCCCCEEEEEEEEEECC
Confidence 345778888865 3455677 5778888888888886 44455565443
No 174
>4ae7_A Thioesterase superfamily member 5; hydrolase, hotdog-fold; 1.45A {Homo sapiens}
Probab=21.66 E-value=1.1e+02 Score=24.15 Aligned_cols=45 Identities=7% Similarity=0.054 Sum_probs=28.6
Q ss_pred hhhccCceeee---eeeEEEeeCCcEEEEEEEEEEEeccc-ceeeecccee
Q 047987 102 MNLHAPEWSGE---VRNITYSVDGKTVSVVYRVTIYGTDA-EVTSNSVNIL 148 (153)
Q Consensus 102 L~fyAPgW~gE---VR~i~ys~dGksVsVvyRVTi~GtDg-e~~REATGT~ 148 (153)
++|..|.-.|+ ++--+..-.|+++ .++++|+..|| ++.=+|+|+-
T Consensus 161 I~ylrPv~~G~~l~~~a~Vv~~~gR~~--~v~~eI~d~dG~~lvA~Ata~f 209 (220)
T 4ae7_A 161 IRFKNLIPVDSLVVMDVEVDKIEDQKL--YMSCIAHSRDQQTVYAKSSGVF 209 (220)
T ss_dssp EEECSCCBTTCCEEEEEEEEEEETTEE--EEEEEEECTTSSCEEEEEEEEE
T ss_pred EEEccccCCCCEEEEEEEEEEeCCCEE--EEEEEEEECCCCEEEEEEEEEE
Confidence 35777776663 3333333346544 36888899999 8887777764
No 175
>1qwd_A Outer membrane lipoprotein BLC; bacterial lipocalin, lipid binding protein; 1.75A {Escherichia coli} SCOP: b.60.1.1 PDB: 2aco_A* 3mbt_A
Probab=21.36 E-value=1.2e+02 Score=22.09 Aligned_cols=52 Identities=19% Similarity=0.181 Sum_probs=31.8
Q ss_pred chhhhhhhhhhccCceeeeeeeEEEe--eCCcEEEEEEEEEEEecccceeeeccceecc
Q 047987 94 PWHIVNRIMNLHAPEWSGEVRNITYS--VDGKTVSVVYRVTIYGTDAEVTSNSVNILLL 150 (153)
Q Consensus 94 PWy~anRiL~fyAPgW~gEVR~i~ys--~dGksVsVvyRVTi~GtDge~~REATGT~~l 150 (153)
-||.+.|+=+.+-.+ | .+....|+ +|| ++.|+.+- ..+.||+ ..++.|++..
T Consensus 42 ~WYeia~~~~~fe~~-~-~~~~a~ytl~~dG-~i~V~n~~-~~~~~g~-~~~~~g~a~~ 95 (177)
T 1qwd_A 42 TWYEIARFDHRFERG-L-EKVTATYSLRDDG-GLNVINKG-YNPDRGM-WQQSEGKAYF 95 (177)
T ss_dssp EEEEEEECCCGGGTT-C-EEEEEEEEECTTS-CEEEEEEE-EETTTTE-EEEEEEEEEE
T ss_pred EEEEEEEECchhhcC-c-EeEEEEEEECCCC-cEEEEEEE-EecCCCC-EEEEEEEEEE
Confidence 499998876655544 2 44455554 566 47777653 2334565 4478888765
No 176
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=21.34 E-value=9.1 Score=24.11 Aligned_cols=14 Identities=21% Similarity=0.643 Sum_probs=10.7
Q ss_pred hhhhhccCceeeeee
Q 047987 100 RIMNLHAPEWSGEVR 114 (153)
Q Consensus 100 RiL~fyAPgW~gEVR 114 (153)
-++.||++ ||+.|+
T Consensus 28 ~ll~f~~~-~C~~C~ 41 (136)
T 1zzo_A 28 AVLWFWAP-WCPTCQ 41 (136)
T ss_dssp EEEEEECT-TCHHHH
T ss_pred EEEEEEcC-CChhHH
Confidence 47889966 998764
No 177
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=21.21 E-value=9.2 Score=24.11 Aligned_cols=14 Identities=14% Similarity=0.786 Sum_probs=10.3
Q ss_pred hhhhccCceeeeeee
Q 047987 101 IMNLHAPEWSGEVRN 115 (153)
Q Consensus 101 iL~fyAPgW~gEVR~ 115 (153)
++.|||| ||+.|+.
T Consensus 28 lv~f~a~-wC~~C~~ 41 (111)
T 2pu9_C 28 VLDMFTQ-WCGPSKA 41 (111)
T ss_dssp EEEEECT-TCHHHHH
T ss_pred EEEEECC-cCHhHHH
Confidence 6788884 8887754
No 178
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=21.06 E-value=76 Score=21.35 Aligned_cols=16 Identities=25% Similarity=0.289 Sum_probs=12.7
Q ss_pred eeeeeeEEEeeCCcEE
Q 047987 110 SGEVRNITYSVDGKTV 125 (153)
Q Consensus 110 ~gEVR~i~ys~dGksV 125 (153)
.+.|..+.+++||+.+
T Consensus 41 ~~~v~~~~~spdg~~l 56 (297)
T 2ojh_A 41 PELFEAPNWSPDGKYL 56 (297)
T ss_dssp SSCCEEEEECTTSSEE
T ss_pred CcceEeeEECCCCCEE
Confidence 4568889999999855
No 179
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=20.87 E-value=9.3 Score=23.31 Aligned_cols=13 Identities=31% Similarity=0.925 Sum_probs=7.3
Q ss_pred hhhhccCceeeeee
Q 047987 101 IMNLHAPEWSGEVR 114 (153)
Q Consensus 101 iL~fyAPgW~gEVR 114 (153)
++.||+| ||+.|+
T Consensus 23 ~v~f~~~-~C~~C~ 35 (104)
T 2vim_A 23 VVDFFAQ-WCGPCR 35 (104)
T ss_dssp EEEEECT-TCHHHH
T ss_pred EEEEECC-CCHHHH
Confidence 4556654 666553
No 180
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=20.60 E-value=72 Score=22.21 Aligned_cols=25 Identities=32% Similarity=0.416 Sum_probs=17.9
Q ss_pred eeeeeeEEEeeCCcEEEEEEEEEEEecccce
Q 047987 110 SGEVRNITYSVDGKTVSVVYRVTIYGTDAEV 140 (153)
Q Consensus 110 ~gEVR~i~ys~dGksVsVvyRVTi~GtDge~ 140 (153)
.+.|.++.|++||+.+ ++ -|.||.+
T Consensus 284 ~~~V~~l~~spdg~~l-~S-----~s~D~~v 308 (318)
T 4ggc_A 284 TSRVLSLTMSPDGATV-AS-----AAADETL 308 (318)
T ss_dssp SSCEEEEEECTTSSCE-EE-----EETTTEE
T ss_pred CCCEEEEEEcCCCCEE-EE-----EecCCeE
Confidence 5789999999999844 21 3667754
No 181
>2jad_A Yellow fluorescent protein glutaredoxin fusion protein; electron transport, redox- active center, yeast, GRX1P, transport; HET: PIA; 2.7A {Aequorea victoria}
Probab=20.18 E-value=1.1e+02 Score=26.14 Aligned_cols=28 Identities=25% Similarity=0.342 Sum_probs=19.5
Q ss_pred cCc-eeeeeeeEEEeeCCcEEEEEEEEEEEe
Q 047987 106 APE-WSGEVRNITYSVDGKTVSVVYRVTIYG 135 (153)
Q Consensus 106 APg-W~gEVR~i~ys~dGksVsVvyRVTi~G 135 (153)
.|+ .++| |.+.|=+ |..+++.+++|+.|
T Consensus 86 ~p~Gy~~e-R~~~fED-gg~~~~~~~~~~~g 114 (362)
T 2jad_A 86 MPEGYVQE-RTIFFKD-DGNYKTRAEVKFEG 114 (362)
T ss_dssp TTTCEEEE-EEEEETT-SCEEEEEEEEEEET
T ss_pred CCCceeEE-EEEEEcC-CcEEEEEEEEEEEC
Confidence 554 6666 6777764 44688888888876
No 182
>4ae8_A Thioesterase superfamily member 4; hydrolase, hotdog-fold; 1.59A {Homo sapiens} PDB: 4gah_A*
Probab=20.07 E-value=1.5e+02 Score=22.80 Aligned_cols=45 Identities=13% Similarity=0.247 Sum_probs=28.6
Q ss_pred hhhccCceeee---eeeEEEeeCCcEEEEEEEEEEEecccc-eeeecccee
Q 047987 102 MNLHAPEWSGE---VRNITYSVDGKTVSVVYRVTIYGTDAE-VTSNSVNIL 148 (153)
Q Consensus 102 L~fyAPgW~gE---VR~i~ys~dGksVsVvyRVTi~GtDge-~~REATGT~ 148 (153)
++|..|.-.|+ ++.-+..-.|++ ++++++|+..||+ +.=+++||-
T Consensus 153 i~flrP~~~G~~l~a~a~v~~~ggr~--~~v~~~i~~~dg~~lvA~a~~tf 201 (211)
T 4ae8_A 153 INYKRPIPLCSVVMINSQLDKVEGRK--FFVSCNVQSVDEKTLYSEATSLF 201 (211)
T ss_dssp EEECSCCBTTCEEEEEEEEEEEETTE--EEEEEEEEETTSCCEEEEEEEEE
T ss_pred EEEeccCCCCCEEEEEEEEEEeCCCE--EEEEEEEEECCCCEEEEEEEEEE
Confidence 56778876663 222233333543 5788999999994 777777764
Done!