Query 047991
Match_columns 146
No_of_seqs 145 out of 1263
Neff 7.3
Searched_HMMs 29240
Date Mon Mar 25 08:39:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047991.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047991hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1fit_A FragIle histidine prote 100.0 2.2E-33 7.5E-38 204.4 12.2 134 5-145 2-146 (147)
2 3imi_A HIT family protein; str 100.0 7.5E-30 2.6E-34 186.0 9.8 127 2-146 7-147 (147)
3 3lb5_A HIT-like protein involv 100.0 3.1E-29 1.1E-33 185.6 11.5 120 4-145 28-161 (161)
4 3o0m_A HIT family protein; ssg 100.0 1.9E-29 6.5E-34 184.3 9.9 99 2-101 3-116 (149)
5 3ksv_A Uncharacterized protein 100.0 6.2E-29 2.1E-33 181.9 12.4 122 4-145 11-146 (149)
6 3l7x_A SMU.412C, putative HIT- 100.0 9.4E-29 3.2E-33 185.1 10.2 124 2-145 34-171 (173)
7 1ems_A Nitfhit, NIT-fragIle hi 100.0 3E-28 1E-32 203.6 12.0 134 3-145 296-440 (440)
8 1y23_A HIT, histidine triad pr 99.9 3.6E-28 1.2E-32 176.1 8.2 124 4-145 5-142 (145)
9 2eo4_A 150AA long hypothetical 99.9 2.8E-27 9.4E-32 172.4 11.2 121 6-145 1-136 (149)
10 3r6f_A HIT family protein; str 99.9 3.4E-27 1.2E-31 169.7 5.9 119 2-145 4-133 (135)
11 3p0t_A Uncharacterized protein 99.9 4.5E-26 1.5E-30 164.1 11.0 118 2-145 3-134 (138)
12 2oik_A Histidine triad (HIT) p 99.9 6.5E-26 2.2E-30 166.1 9.8 94 3-103 9-113 (154)
13 3ano_A AP-4-A phosphorylase; d 99.9 3.9E-25 1.3E-29 170.9 8.7 117 4-120 69-206 (218)
14 3n1s_A HIT-like protein HINT; 99.9 2.9E-25 1E-29 156.5 6.1 94 3-97 2-110 (119)
15 4egu_A Histidine triad (HIT) p 99.9 6.8E-25 2.3E-29 154.1 6.3 97 1-98 1-112 (119)
16 3oj7_A Putative histidine tria 99.9 3.3E-24 1.1E-28 150.3 7.2 93 3-97 5-112 (117)
17 3ohe_A Histidine triad (HIT) p 99.9 3.4E-23 1.2E-27 149.5 12.3 110 16-145 13-133 (137)
18 3nrd_A Histidine triad (HIT) p 99.9 2.3E-23 8E-28 150.0 11.0 110 16-145 15-135 (135)
19 3i24_A HIT family hydrolase; s 99.9 3.8E-23 1.3E-27 151.3 12.1 110 16-145 13-133 (149)
20 3o1c_A Histidine triad nucleot 99.9 4.4E-24 1.5E-28 151.8 5.3 95 2-97 13-121 (126)
21 1xqu_A HIT family hydrolase; p 99.9 6.4E-23 2.2E-27 149.7 6.8 94 2-97 33-142 (147)
22 3i4s_A Histidine triad protein 99.9 3E-21 1E-25 141.2 12.9 111 16-146 18-139 (149)
23 1z84_A Galactose-1-phosphate u 99.8 3.4E-19 1.2E-23 146.0 12.6 94 4-98 214-322 (351)
24 1gup_A Galactose-1-phosphate u 99.8 6.4E-20 2.2E-24 150.0 7.8 104 4-108 194-318 (348)
25 3sp4_A Aprataxin-like protein; 98.7 2.4E-09 8.2E-14 81.6 1.9 85 18-106 23-138 (204)
26 1z84_A Galactose-1-phosphate u 98.2 8.8E-06 3E-10 66.3 9.3 60 34-93 132-191 (351)
27 3bl9_A Scavenger mRNA-decappin 98.1 7E-06 2.4E-10 65.7 6.6 80 15-98 150-252 (301)
28 1vlr_A MRNA decapping enzyme; 98.0 9.4E-06 3.2E-10 66.0 6.6 80 15-98 197-299 (350)
29 1gup_A Galactose-1-phosphate u 96.3 0.009 3.1E-07 48.3 6.6 58 34-93 114-171 (348)
30 3vg8_G Hypothetical protein TT 89.7 0.41 1.4E-05 32.5 4.0 26 66-92 75-100 (116)
31 2pof_A CDP-diacylglycerol pyro 76.8 4.2 0.00014 31.0 5.2 75 16-92 31-120 (227)
32 2bf9_A Pancreatic hormone; tur 52.0 20 0.00067 19.3 3.2 24 122-145 5-28 (36)
33 1bba_A Bovine pancreatic polyp 46.5 15 0.00051 19.8 2.2 24 122-145 5-28 (36)
34 3g5g_A Regulatory protein; tra 45.0 29 0.00099 22.0 4.0 35 84-118 4-38 (99)
35 1omh_A TRWC protein; protein-D 40.3 53 0.0018 25.6 5.5 50 44-93 104-166 (293)
36 1f45_B Interleukin-12 alpha ch 36.4 49 0.0017 24.4 4.4 44 102-145 102-148 (197)
37 2nyx_A Probable transcriptiona 29.6 27 0.00094 23.8 2.1 26 39-64 128-153 (168)
38 2l60_A Peptide YY; GPCR ligand 26.0 58 0.002 18.0 2.5 19 127-145 14-32 (41)
39 1f8p_A Neuropeptide Y (PNPY); 24.7 41 0.0014 18.2 1.7 21 125-145 8-28 (37)
40 2jm6_A NOXA; apoptosis, BCL-2, 23.5 22 0.00074 17.6 0.4 13 132-144 2-14 (27)
41 2ns6_A Mobilization protein A; 22.2 1.8E+02 0.0061 20.9 5.4 49 40-95 80-128 (185)
42 3l6t_A TRAI, mobilization prot 21.0 97 0.0033 24.3 3.9 51 43-93 105-168 (302)
43 4h31_A Otcase, ornithine carba 20.9 88 0.003 25.0 3.8 29 34-62 32-60 (358)
44 2ef0_A Ornithine carbamoyltran 20.7 1E+02 0.0035 24.0 4.1 28 34-61 10-37 (301)
45 3tpf_A Otcase, ornithine carba 20.3 1.1E+02 0.0038 23.9 4.1 29 34-62 3-31 (307)
46 1dxh_A Ornithine carbamoyltran 20.2 1.2E+02 0.004 24.1 4.3 28 34-61 7-34 (335)
No 1
>1fit_A FragIle histidine protein; FHIT, fragIle histidine triad protein, putative human tumor suppressor, advanced photon source, APS; HET: FRU; 1.85A {Homo sapiens} SCOP: d.13.1.1 PDB: 1fhi_A* 2fit_A* 3fit_A* 4fit_A 5fit_A* 6fit_A* 2fhi_A*
Probab=100.00 E-value=2.2e-33 Score=204.42 Aligned_cols=134 Identities=46% Similarity=0.750 Sum_probs=109.9
Q ss_pred cceecccccCCccEEEECCcEEEEEeCCC-----------cccCCCCCCCHHHHHHHHHHHHHHHHHhhhhcCCCceEEE
Q 047991 5 YYQFGPHKIDAKDVFYTTPLSFVMVNLRP-----------REVKRFADLTADEICDLWLTARKVGRQLEVYHKASSLTLN 73 (146)
Q Consensus 5 ~~~f~~~~ip~~~vv~e~d~~~af~di~P-----------~H~~~~~dL~~ee~~~l~~~~~~v~~~l~~~~~~~~~ni~ 73 (146)
.+.||++.||++++||||++++||+|++| +|+.++.+|+++++.+|+.+++++++++++.+++++||++
T Consensus 2 ~~~f~~~~ip~~~iv~e~~~~~a~~d~~p~~pgh~LViPk~h~~~~~dL~~~e~~~l~~~~~~v~~~l~~~~~~~~~ni~ 81 (147)
T 1fit_A 2 SFRFGQHLIKPSVVFLKTELSFALVNRKPVVPGHVLVCPLRPVERFHDLRPDEVADLFQTTQRVGTVVEKHFHGTSLTFS 81 (147)
T ss_dssp CEEETTEEECGGGEEEECSSEEEEECSSCSSTTCEEEEESSCCSSGGGSCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEE
T ss_pred ceEecCcccCCcEEEEECCCEEEEECCCCCCCcEEEEEEccccCChhhCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 47899999999999999999999999988 8999999999999999999999999999999999999999
Q ss_pred EecCCCCCCccCeEEEEEeccCCCCCCCChhhhhhhHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHhhc
Q 047991 74 IQDGPQAGQSVPHVHIHIVPRKESDFENNDEIYDALDVKEKELKKKLDLDEERKDRSPEERIQEANEYRSLF 145 (146)
Q Consensus 74 ~n~g~~~gq~v~H~HiHIIPR~~~d~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (146)
+|+|+.+||+|+|+|+|||||+.+|..+++..|..+..... .+..+..+++|||+++|++||+.|
T Consensus 82 ~n~g~~agq~v~HlH~HiiPr~~~d~~~~~~v~~~~~~~~~-------~~~~~~~~~~~e~~~~a~~lr~~l 146 (147)
T 1fit_A 82 MQDGPEAGQTVKHVHVHVLPRKAGDFHRNDSIYEELQKHDK-------EDFPASWRSEEEMAAEAAALRVYF 146 (147)
T ss_dssp ECCSGGGTCCSSSCCEEEEEECTTC---------------------------CCCCCHHHHHHHHHHHHHTT
T ss_pred EecCCccCCCccEEEEEEECCcCCCCCCcchHHHHhhhccc-------ccccccCCCHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999888888887652210 034567789999999999999987
No 2
>3imi_A HIT family protein; structural genomics, infectious diseases for structural genomics of infectious diseases, unknown FUN csgid; 2.01A {Bacillus anthracis str} SCOP: d.13.1.1
Probab=99.96 E-value=7.5e-30 Score=186.01 Aligned_cols=127 Identities=15% Similarity=0.240 Sum_probs=110.4
Q ss_pred CCccceeccc---ccCCccEEEECCcEEEEEeCCC-----------cccCCCCCCCHHHHHHHHHHHHHHHHHhhhhcCC
Q 047991 2 SIEYYQFGPH---KIDAKDVFYTTPLSFVMVNLRP-----------REVKRFADLTADEICDLWLTARKVGRQLEVYHKA 67 (146)
Q Consensus 2 ~~~~~~f~~~---~ip~~~vv~e~d~~~af~di~P-----------~H~~~~~dL~~ee~~~l~~~~~~v~~~l~~~~~~ 67 (146)
+|+.|.||+. ++| +++||||++++||+|++| +|++++.+|+++++.+|+.+++++++++++.+++
T Consensus 7 ~m~~CifC~i~~~e~~-~~iV~e~~~~~a~~d~~p~~pgh~lViPk~H~~~l~dL~~~e~~~l~~~~~~v~~~l~~~~~~ 85 (147)
T 3imi_A 7 TADNCIFCKIIDGQIL-CSKVYEDEHVLAFLDISQVTKGHTLVIPKVHKQDIFALTPEIASHIFSVVPKIANAIKAEFNP 85 (147)
T ss_dssp CGGGCHHHHHHTTSSC-CCEEEECSSEEEEECTTCSSTTCEEEEESSCCCSGGGCCHHHHHHHHHTHHHHHHHHHHHHCC
T ss_pred ccCCCcCcccccCCCc-CCEEEECCCEEEEEcCCCCCCcEEEEEEeeccCChhhCCHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 3678999986 566 799999999999999988 8999999999999999999999999999999999
Q ss_pred CceEEEEecCCCCCCccCeEEEEEeccCCCCCCCChhhhhhhHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHhhcC
Q 047991 68 SSLTLNIQDGPQAGQSVPHVHIHIVPRKESDFENNDEIYDALDVKEKELKKKLDLDEERKDRSPEERIQEANEYRSLFL 146 (146)
Q Consensus 68 ~~~ni~~n~g~~~gq~v~H~HiHIIPR~~~d~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (146)
+|||+++|+|+.+||+|+|+|+|||||+.+|..+ ...|. +.+...+++++++.+++||+.|.
T Consensus 86 ~~~ni~~n~g~~aGq~v~HlHiHiiPR~~~~~~~-~~~~~----------------~~~~~~~~~~~~~~~~~ir~~l~ 147 (147)
T 3imi_A 86 VGFNLLNNNGEKAGQTVFHFHLHLIPRYGENDGF-GAVWK----------------SHQNEYTMENLQNIASTIANSVK 147 (147)
T ss_dssp SEEEEEEEESGGGTCCSSSCCEEEEEECSTTCSE-EEEEC----------------CCGGGCCHHHHHHHHHHHHHHCC
T ss_pred CCEEEEEeCCcccCCCcCEEEEEEeCCccCCCCc-eeecc----------------ccCCCCCHHHHHHHHHHHHHhhC
Confidence 9999999999999999999999999999987543 22221 12344688999999999998773
No 3
>3lb5_A HIT-like protein involved in cell-cycle regulatio; niaid, seattle structural genomics center for infectious DIS ssgcid, histidine triad; 1.90A {Bartonella henselae}
Probab=99.96 E-value=3.1e-29 Score=185.64 Aligned_cols=120 Identities=17% Similarity=0.245 Sum_probs=106.9
Q ss_pred ccceeccc---ccCCccEEEECCcEEEEEeCCC-----------cccCCCCCCCHHHHHHHHHHHHHHHHHhhhhcCCCc
Q 047991 4 EYYQFGPH---KIDAKDVFYTTPLSFVMVNLRP-----------REVKRFADLTADEICDLWLTARKVGRQLEVYHKASS 69 (146)
Q Consensus 4 ~~~~f~~~---~ip~~~vv~e~d~~~af~di~P-----------~H~~~~~dL~~ee~~~l~~~~~~v~~~l~~~~~~~~ 69 (146)
..|.||+. ++| +++||||++|+||+|++| +|+.++.+|+++++.+|+.+++++++++++.+++++
T Consensus 28 ~~CiFC~i~~~e~p-~~iV~e~e~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~ee~~~l~~~~~~v~~~l~~~~~~~g 106 (161)
T 3lb5_A 28 NNNIFAKLIRNEIP-SVRVYEDDDVIAFMDIMPQAPGHTLVIPKKGSRNLLDADTETLFPVIKAVQKIAKAVKKAFQADG 106 (161)
T ss_dssp TTSHHHHHHTTSSC-CCEEEECSSEEEEECSSCSSTTCEEEEESSCCSSTTTSCHHHHHHHHHHHHHHHHHHHHHHTCSE
T ss_pred CCCcccccccCCCC-ccEEEECCCEEEEECCCcCCCcEEEEEEeeccchhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 47999997 566 799999999999999988 899999999999999999999999999999999999
Q ss_pred eEEEEecCCCCCCccCeEEEEEeccCCCCCCCChhhhhhhHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHhhc
Q 047991 70 LTLNIQDGPQAGQSVPHVHIHIVPRKESDFENNDEIYDALDVKEKELKKKLDLDEERKDRSPEERIQEANEYRSLF 145 (146)
Q Consensus 70 ~ni~~n~g~~~gq~v~H~HiHIIPR~~~d~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (146)
||+++|+|+.+||+|+|+|+|||||+.+|..+.. .+...+++++++.+++||+.|
T Consensus 107 ~ni~~n~g~~aGq~V~HlHiHiiPR~~~d~~~~~---------------------~~~~~~~~~l~~~~~~ir~~L 161 (161)
T 3lb5_A 107 ITVMQFNEAASQQTVYHLHFHIIPRMEGIELTPH---------------------NNIITPTEILEENAKKIRAAL 161 (161)
T ss_dssp EEEEEEESGGGTCCSCSCCEEEEEECTTCCC---------------------------CCCHHHHHHHHHHHHHHC
T ss_pred EEEEEecCcccCCCCCEEEEEEEcccCCCCCCcC---------------------cccCCCHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999875321 224578999999999999875
No 4
>3o0m_A HIT family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, hydrola structural genomics; HET: AMP; 1.90A {Mycobacterium smegmatis str}
Probab=99.96 E-value=1.9e-29 Score=184.25 Aligned_cols=99 Identities=20% Similarity=0.314 Sum_probs=92.4
Q ss_pred CCccceeccc---ccCCccEEEECCcEEEEEeCCC-----------cccCCCCCCCHHHHHHHHHHHHHHHHHhhhh-cC
Q 047991 2 SIEYYQFGPH---KIDAKDVFYTTPLSFVMVNLRP-----------REVKRFADLTADEICDLWLTARKVGRQLEVY-HK 66 (146)
Q Consensus 2 ~~~~~~f~~~---~ip~~~vv~e~d~~~af~di~P-----------~H~~~~~dL~~ee~~~l~~~~~~v~~~l~~~-~~ 66 (146)
+|+.|.||+. ++| +++||||++++||+|++| +|+.++.+|+++++.+|+.+++++++++++. ++
T Consensus 3 ~m~~CiFC~i~~~e~~-~~iv~e~~~~~af~d~~p~~pgh~lViPk~H~~~l~dl~~~~~~~l~~~~~~v~~~l~~~~~~ 81 (149)
T 3o0m_A 3 GSMSCVFCAIVSGDAP-AIRIYEDENFLGILDIRPFTRGHTLVIPKTHTVDLTDTPPETVAGMAAVGQRIARAARESGLH 81 (149)
T ss_dssp CTTTCHHHHHHTTSSC-CCEEEECSSEEEEECSSCSSTTCEEEEESSCCCSTTTSCHHHHHHHHHHHHHHHHHHHHSTTC
T ss_pred CCCCCccCccccCCCC-CCEEEECCCEEEEEcCCCCCCCeEEEEechhhCCHhHCCHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 4778999987 566 799999999999999988 8999999999999999999999999999998 89
Q ss_pred CCceEEEEecCCCCCCccCeEEEEEeccCCCCCCC
Q 047991 67 ASSLTLNIQDGPQAGQSVPHVHIHIVPRKESDFEN 101 (146)
Q Consensus 67 ~~~~ni~~n~g~~~gq~v~H~HiHIIPR~~~d~~~ 101 (146)
+++||+++|+|+.+||+|+|+|+|||||+.+|..+
T Consensus 82 ~~~~ni~~n~g~~aGq~v~HlHiHiiPR~~~d~~~ 116 (149)
T 3o0m_A 82 ADGNNIAINDGKAAFQTVFHIHLHVVPRRNGDKLS 116 (149)
T ss_dssp CSEEEEECCCSGGGTCCSSSCCEEEEEECTTCCCC
T ss_pred CCceEEEEecCCCCCCccceEEEEEECCccCCCcc
Confidence 99999999999999999999999999999998543
No 5
>3ksv_A Uncharacterized protein; HIT family, structural genomics, structural genomics of PATH protozoa consortium, SGPP, unknown function; 1.90A {Leishmania major} SCOP: d.13.1.0
Probab=99.96 E-value=6.2e-29 Score=181.88 Aligned_cols=122 Identities=18% Similarity=0.262 Sum_probs=107.8
Q ss_pred ccceeccc---ccCCccEEEECCcEEEEEeCCC-----------cccCCCCCCCHHHHHHHHHHHHHHHHHhhhhcCCCc
Q 047991 4 EYYQFGPH---KIDAKDVFYTTPLSFVMVNLRP-----------REVKRFADLTADEICDLWLTARKVGRQLEVYHKASS 69 (146)
Q Consensus 4 ~~~~f~~~---~ip~~~vv~e~d~~~af~di~P-----------~H~~~~~dL~~ee~~~l~~~~~~v~~~l~~~~~~~~ 69 (146)
..|.||+. ++| +++||||++++||+|++| +|++++.+|+++++.+|+.++++++++++..++++|
T Consensus 11 ~~~iFc~Ii~geip-~~iV~ed~~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~~e~~~l~~~~~~v~~~l~~~~~~~g 89 (149)
T 3ksv_A 11 ANCIFCKIIKGDIP-CAKVAETSKALAFMDINPLSRGHMLVIPKEHASCLHELGMEDAADVGVLLAKASRAVAGPDGSMQ 89 (149)
T ss_dssp TTCHHHHHHHTSSC-CCEEEECSSEEEEECSSCSSTTCEEEEESSCCSSGGGSCHHHHHHHHHHHHHHHHHHHCTTSCCE
T ss_pred ccCHHHHHHcCCCC-ccEEEECCCEEEEECCCCCCCCEEEEEeChhhhhhhhCCHHHHHHHHHHHHHHHHHHHHhhCCCC
Confidence 35788886 677 799999999999999988 899999999999999999999999999999999999
Q ss_pred eEEEEecCCCCCCccCeEEEEEeccCCCCCCCChhhhhhhHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHhhc
Q 047991 70 LTLNIQDGPQAGQSVPHVHIHIVPRKESDFENNDEIYDALDVKEKELKKKLDLDEERKDRSPEERIQEANEYRSLF 145 (146)
Q Consensus 70 ~ni~~n~g~~~gq~v~H~HiHIIPR~~~d~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (146)
||+++|+|+.+||+|+|+|+|||||+.+|..+. .. |+ +...+++++++.+++||+.|
T Consensus 90 ~ni~~n~g~~aGq~v~HlHiHiiPR~~~d~g~~-~~-----------------w~-~~~~~~~~l~~~~~~lr~~l 146 (149)
T 3ksv_A 90 YNVLQNNGSLAHQEVPHVHFHIIPKTDEKTGLK-IG-----------------WD-TVKVASDELAEDAKRYSEAI 146 (149)
T ss_dssp EEEEECCSTTTTCCSSSCCEEEEEECCTTSSCC-CC-----------------CC-CCCCCHHHHHHHHHHHHHHH
T ss_pred EEEEEecCcccCCCCCEEEEEEEecccCCCCcc-cC-----------------CC-CCCCCHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999875321 11 22 23478999999999999876
No 6
>3l7x_A SMU.412C, putative HIT-like protein involved in cell-cycle regulation; 1.70A {Streptococcus mutans}
Probab=99.96 E-value=9.4e-29 Score=185.10 Aligned_cols=124 Identities=21% Similarity=0.287 Sum_probs=105.7
Q ss_pred CCccceeccc---ccCCccEEEECCcEEEEEeCCC-----------cccCCCCCCCHHHHHHHHHHHHHHHHHhhhhcCC
Q 047991 2 SIEYYQFGPH---KIDAKDVFYTTPLSFVMVNLRP-----------REVKRFADLTADEICDLWLTARKVGRQLEVYHKA 67 (146)
Q Consensus 2 ~~~~~~f~~~---~ip~~~vv~e~d~~~af~di~P-----------~H~~~~~dL~~ee~~~l~~~~~~v~~~l~~~~~~ 67 (146)
+|+.|.||+. ++| +++||||++|+||+|++| +|+.++.+|+++++.+|+.+++++++++++.+++
T Consensus 34 ~m~~CiFC~Ii~~e~p-~~iV~e~e~~~afld~~P~~pgH~LVIPkrHv~~l~dL~~ee~~~L~~~~~~v~~~l~~~~~~ 112 (173)
T 3l7x_A 34 SMNDCLFCKIVAGDIP-SSKVYEDEDVLAFLDISQATKGHTLVIPKEHVRNALEMTQTQAANLFARIPKIARALQKATKA 112 (173)
T ss_dssp CCTTCHHHHHHHTSSC-CCEEEECSSEEEEECTTCSSTTCEEEEESSCCSCGGGCCHHHHHHHHHTHHHHHHHHHHHHTC
T ss_pred CCCCCcccccccCCCC-ceEEEECCCEEEEEcCCCCCCcEEEEEeccccCChhhCCHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 3678999996 566 799999999999999988 8999999999999999999999999999999999
Q ss_pred CceEEEEecCCCCCCccCeEEEEEeccCCCCCCCChhhhhhhHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHhhc
Q 047991 68 SSLTLNIQDGPQAGQSVPHVHIHIVPRKESDFENNDEIYDALDVKEKELKKKLDLDEERKDRSPEERIQEANEYRSLF 145 (146)
Q Consensus 68 ~~~ni~~n~g~~~gq~v~H~HiHIIPR~~~d~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (146)
++||+++|+|+.+||+|+|+|+|||||+.+|..+. ..| .. ....+|++++.+++||+.|
T Consensus 113 ~g~ni~~n~g~~aGq~V~HlHiHiIPR~~~d~gf~-~~~-----------------~~-~~~~~~~l~~~~~~ir~~L 171 (173)
T 3l7x_A 113 DGLNIINNNEETAGQTVFHAHVHLVPRFADSDEFD-IRF-----------------VQ-HEPDFTRLGQLAEDIQKEI 171 (173)
T ss_dssp SEEEEEECCSGGGTCCSCSCCEEEEEECC-CCSCC-CCC-----------------CC-CCCCHHHHHHHHHHHHHHH
T ss_pred CCEEEEEecCcccCCCcCEEEEEEEecccCCCCcc-ccc-----------------CC-CCCCHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999765431 112 11 1235688888888888765
No 7
>1ems_A Nitfhit, NIT-fragIle histidine triad fusion protein; WORM, nitrilase, nucleotide-binding protein, cancer; 2.80A {Caenorhabditis elegans} SCOP: d.13.1.1 d.160.1.1
Probab=99.95 E-value=3e-28 Score=203.59 Aligned_cols=134 Identities=49% Similarity=0.777 Sum_probs=109.6
Q ss_pred CccceecccccCCccEEEECCcEEEEEeCCC-----------cccCCCCCCCHHHHHHHHHHHHHHHHHhhhhcCCCceE
Q 047991 3 IEYYQFGPHKIDAKDVFYTTPLSFVMVNLRP-----------REVKRFADLTADEICDLWLTARKVGRQLEVYHKASSLT 71 (146)
Q Consensus 3 ~~~~~f~~~~ip~~~vv~e~d~~~af~di~P-----------~H~~~~~dL~~ee~~~l~~~~~~v~~~l~~~~~~~~~n 71 (146)
...|.||+.++|..+|||||++++||+|++| +|+.++.+|+++++.+|+.+++++++++++.+++++||
T Consensus 296 ~~~c~fc~~e~p~~~iv~e~~~~~a~~~~~p~~pgh~lviPk~h~~~~~~l~~~~~~~l~~~~~~v~~~l~~~~~~~~~n 375 (440)
T 1ems_A 296 TGGLKFARFNIPADHIFYSTPHSFVFVNLKPVTDGHVLVSPKRVVPRLTDLTDAETADLFIVAKKVQAMLEKHHNVTSTT 375 (440)
T ss_dssp SSCCEETTEECCGGGEEEECSSEEEEECSSCSSTTCEEEEESSCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHTTCSEEE
T ss_pred cCceeeeccccCCceEEEECCCEEEEEcCCcCCCCeEEEEEccccCChhHCCHHHHHHHHHHHHHHHHHHHhhcCCCCeE
Confidence 4579999999996689999999999999988 89999999999999999999999999999999999999
Q ss_pred EEEecCCCCCCccCeEEEEEeccCCCCCCCChhhhhhhHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHhhc
Q 047991 72 LNIQDGPQAGQSVPHVHIHIVPRKESDFENNDEIYDALDVKEKELKKKLDLDEERKDRSPEERIQEANEYRSLF 145 (146)
Q Consensus 72 i~~n~g~~~gq~v~H~HiHIIPR~~~d~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (146)
+++|+|+.+||+|+|+|+|||||+.+|..++ ..|..+... ..++.++.+++|+|+++|++||+.|
T Consensus 376 ~~~~~g~~~gq~v~HlH~Hiipr~~~d~~~~-~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~l~~~~ 440 (440)
T 1ems_A 376 ICVQDGKDAGQTVPHVHIHILPRRAGDFGDN-EIYQKLASH--------DKEPERKPRSNEQMAEEAVVYRNLM 440 (440)
T ss_dssp EECCCSGGGTCCSSSCCEEEEEECSSCC----------------------------CCCHHHHHHHHHHHHTTC
T ss_pred EEEecCCCCCCCccEEEEEEeCCCCCCCCcc-hhHHHhhhc--------ccccccCCCCHHHHHHHHHHHHhhC
Confidence 9999999999999999999999999997666 677665422 1234577899999999999999876
No 8
>1y23_A HIT, histidine triad protein; HIT protein, PKCI-1, cell-cycle regulation, NYSGXRC, structural genomics, protein structure initiative; 2.30A {Bacillus subtilis} SCOP: d.13.1.1
Probab=99.95 E-value=3.6e-28 Score=176.07 Aligned_cols=124 Identities=19% Similarity=0.283 Sum_probs=107.9
Q ss_pred ccceeccc---ccCCccEEEECCcEEEEEeCCC-----------cccCCCCCCCHHHHHHHHHHHHHHHHHhhhhcCCCc
Q 047991 4 EYYQFGPH---KIDAKDVFYTTPLSFVMVNLRP-----------REVKRFADLTADEICDLWLTARKVGRQLEVYHKASS 69 (146)
Q Consensus 4 ~~~~f~~~---~ip~~~vv~e~d~~~af~di~P-----------~H~~~~~dL~~ee~~~l~~~~~~v~~~l~~~~~~~~ 69 (146)
..|.||+. ++| +++||||++++||+|++| +|++++.+|+++++.+|+.+++++.+++++.+++++
T Consensus 5 ~~C~fC~i~~~e~~-~~iv~e~~~~~a~~~~~p~~pgh~LViPk~h~~~l~dL~~~~~~~l~~~~~~v~~~l~~~~~~~~ 83 (145)
T 1y23_A 5 ENCIFCKIIAGDIP-SAKVYEDEHVLAFLDISQVTKGHTLVIPKTHIENVYEFTDELAKQYFHAVPKIARAIRDEFEPIG 83 (145)
T ss_dssp CCCHHHHHHHTSSC-CCEEEECSSEEEEECTTCSSTTCEEEEESSCCSSGGGCCHHHHHTTTTHHHHHHHHHHHHHCCSE
T ss_pred CCCcCCccccCCCC-CCEEEECCCEEEEECCCCCCCCeEEEEEhhhhhhHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 57999985 566 799999999999999888 899999999999999999999999999999999999
Q ss_pred eEEEEecCCCCCCccCeEEEEEeccCCCCCCCChhhhhhhHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHhhc
Q 047991 70 LTLNIQDGPQAGQSVPHVHIHIVPRKESDFENNDEIYDALDVKEKELKKKLDLDEERKDRSPEERIQEANEYRSLF 145 (146)
Q Consensus 70 ~ni~~n~g~~~gq~v~H~HiHIIPR~~~d~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (146)
||+++|+|+.+||+|+|+|+|||||+.+|..+. ..|. +.....++|++++.+++||+.|
T Consensus 84 ~ni~~n~g~~~g~~v~HlH~HiiPr~~~~~~~~-~~~~----------------~~~~~~~~~~~~~~~~~lr~~l 142 (145)
T 1y23_A 84 LNTLNNNGEKAGQSVFHYHMHIIPRYGKGDGFG-AVWK----------------THADDYKPEDLQNISSSIAKRL 142 (145)
T ss_dssp EEEEEEESGGGTCCSSSCCEEEEEECSTTCSEE-EEEC----------------CCGGGSCHHHHHHHHHHHHHHT
T ss_pred EEEEEcCCcCCCCCcCEEEEEEEccccCCCCcc-cccC----------------CCCCCCCHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999875321 1111 1123478999999999999876
No 9
>2eo4_A 150AA long hypothetical histidine triad nucleotid protein; HIT family, structural genomics, NPPSFA; 1.80A {Sulfolobus tokodaii}
Probab=99.95 E-value=2.8e-27 Score=172.45 Aligned_cols=121 Identities=19% Similarity=0.288 Sum_probs=104.4
Q ss_pred ceeccc---ccCCccEEEECCcEEEEEeCCC-----------cccCCCCCCCHHHHHHHHHHHHHHHHHhhhhcCCCceE
Q 047991 6 YQFGPH---KIDAKDVFYTTPLSFVMVNLRP-----------REVKRFADLTADEICDLWLTARKVGRQLEVYHKASSLT 71 (146)
Q Consensus 6 ~~f~~~---~ip~~~vv~e~d~~~af~di~P-----------~H~~~~~dL~~ee~~~l~~~~~~v~~~l~~~~~~~~~n 71 (146)
|.||+. ++| +++||||++++||+|++| +|+.++.+|+++++.+|+.+++++.+++++.+++++||
T Consensus 1 CiFC~i~~~e~~-~~iv~e~~~~~a~~d~~p~~pgh~lViPk~H~~~~~dL~~~e~~~l~~~~~~v~~~l~~~~~~~~~n 79 (149)
T 2eo4_A 1 CTFCSIINRELE-GYFVYEDEKFAAILDKYPVSLGHTLVIPKKHFENYLEADEDTLAELAKVVKLVSLGIKDAVKADGLR 79 (149)
T ss_dssp CHHHHHHTTSSC-CCEEEECSSEEEEECSSCSSTTCEEEEESSCCSSGGGSCHHHHHHHHHHHHHHHHHHHHHTTCSEEE
T ss_pred CcCcccccCCCC-ccEEEECCCEEEEECCCCCCCCeEEEEechhhCCHhHCCHHHHHHHHHHHHHHHHHHHHhcCCCCeE
Confidence 567864 566 799999999999999888 89999999999999999999999999999999999999
Q ss_pred EEEecCCCCCCccCeEEEEEeccCCCCC-CCChhhhhhhHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHhhc
Q 047991 72 LNIQDGPQAGQSVPHVHIHIVPRKESDF-ENNDEIYDALDVKEKELKKKLDLDEERKDRSPEERIQEANEYRSLF 145 (146)
Q Consensus 72 i~~n~g~~~gq~v~H~HiHIIPR~~~d~-~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (146)
+++|+|+.+||+|+|+|+|||||+.+|. ... ..| .+.+. .+++++++.+++||+.|
T Consensus 80 i~~n~g~~~gq~v~HlHiHviPr~~~d~~~~~-~~~----------------~~~~~-~~~~~~~~~~~~lr~~l 136 (149)
T 2eo4_A 80 LLTNIGRSAGQVIFHLHVHIIPTWEGDYPDIF-KSF----------------KPRKE-QEKEYYELLQKIIRESI 136 (149)
T ss_dssp EECCCSGGGTCCSCSCCEEEEEECSSCCCTTS-CCC----------------CTTSC-CCHHHHHHHHHHHHHHH
T ss_pred EEEecCcCCCCCcCEEEEEEECCcCCCCcccc-ccc----------------CCCCC-CCHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999885 211 111 01234 78999999999999875
No 10
>3r6f_A HIT family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, protozoan parasite; 1.85A {Encephalitozoon cuniculi}
Probab=99.94 E-value=3.4e-27 Score=169.70 Aligned_cols=119 Identities=20% Similarity=0.220 Sum_probs=99.5
Q ss_pred CCccceecccccCCccEEEECCcEEEEEeCCC-----------cccCCCCCCCHHHHHHHHHHHHHHHHHhhhhcCCCce
Q 047991 2 SIEYYQFGPHKIDAKDVFYTTPLSFVMVNLRP-----------REVKRFADLTADEICDLWLTARKVGRQLEVYHKASSL 70 (146)
Q Consensus 2 ~~~~~~f~~~~ip~~~vv~e~d~~~af~di~P-----------~H~~~~~dL~~ee~~~l~~~~~~v~~~l~~~~~~~~~ 70 (146)
+|+.|.||+..-.++++||||++++||+|++| +|+.++.||+++++.+|+.+++++.+++ ++++|
T Consensus 4 ~~~~C~fC~i~~~~~~iv~e~~~~~af~d~~p~~pgh~lViPk~H~~~l~dL~~~~~~~l~~~~~~v~~~~----~~~~~ 79 (135)
T 3r6f_A 4 SMEGCIFCTLYRKGANIIYETDRLFALIDRYPLSKGHFLVIPKAHHPYLHNYKPEELSGVLDTIRHLVQKF----GFERY 79 (135)
T ss_dssp --CCCHHHHHHHHCCSCCEECSSEEEEECSSCSSTTCEEEEESSCCSSGGGSCGGGGTTHHHHHHHHHHHH----TCCSE
T ss_pred CCCCCcCcccccCCceEEEECCCEEEEECCCCCCCCeEEEEEhhHhCCHhHCCHHHHHHHHHHHHHHHHHh----CCCCe
Confidence 36789999975223799999999999999988 8999999999999999999999887764 67899
Q ss_pred EEEEecCCCCCCccCeEEEEEeccCCCCCCCChhhhhhhHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHhhc
Q 047991 71 TLNIQDGPQAGQSVPHVHIHIVPRKESDFENNDEIYDALDVKEKELKKKLDLDEERKDRSPEERIQEANEYRSLF 145 (146)
Q Consensus 71 ni~~n~g~~~gq~v~H~HiHIIPR~~~d~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (146)
|+++|+|+ ||+|+|+|+|||||+.+|..+. .. |+ +...+++++++.+++||+.|
T Consensus 80 ni~~n~g~--gq~v~HlH~HiiPR~~~d~g~~-~~-----------------~~-~~~~~~~~l~~~~~~ir~~l 133 (135)
T 3r6f_A 80 NILQNNGN--HQEVFHVHFHVIPFVSADERLM-IN-----------------WK-AKSVSDKEYSEMVEEARLRV 133 (135)
T ss_dssp EEECCSSS--SCSSSSCCEEEEECCBTTBSCC-CC-----------------CC-CCCCCHHHHHHHHHHHHHHH
T ss_pred EEEEEcCC--CCCccEEEEEEeccccCCCCce-ec-----------------CC-CCCCCHHHHHHHHHHHHHHh
Confidence 99999998 9999999999999998875322 11 32 23468999999999999876
No 11
>3p0t_A Uncharacterized protein; ssgcid, HIT-like protein, mycobacerium paratuberculosis, STR genomics; 1.90A {Mycobacterium avium subsp}
Probab=99.93 E-value=4.5e-26 Score=164.10 Aligned_cols=118 Identities=16% Similarity=0.305 Sum_probs=100.9
Q ss_pred CCccceeccc---ccCCccEEEECCcEEEEEeCCC-----------cccCCCCCCCHHHHHHHHHHHHHHHHHhhhhcCC
Q 047991 2 SIEYYQFGPH---KIDAKDVFYTTPLSFVMVNLRP-----------REVKRFADLTADEICDLWLTARKVGRQLEVYHKA 67 (146)
Q Consensus 2 ~~~~~~f~~~---~ip~~~vv~e~d~~~af~di~P-----------~H~~~~~dL~~ee~~~l~~~~~~v~~~l~~~~~~ 67 (146)
+...|.||+. ++| +++||||++++||+|++| +|+.++.+|+++++.+|+.+++++++++++.+++
T Consensus 3 ~~~~CiFC~i~~~e~p-~~iV~e~~~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~~e~~~l~~~~~~v~~~l~~~~~~ 81 (138)
T 3p0t_A 3 GSMASIFTKIINRELP-GRFVYEDDDVVAFLTIEPMTQGHTLVVPREEIDNWQDVDSAAFNRVMGVSQLIGKAVCKAFRT 81 (138)
T ss_dssp CCHHHHHHHHHTTSSC-CCEEEECSSEEEEECSSCSSTTCEEEEESSCCCCGGGSCHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCChhhHHhcCCCC-cCEEEeCCCEEEEecCCCCCCcEEEEEEhHHhCchhhCCHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 4457999975 566 799999999999999988 8999999999999999999999999999999999
Q ss_pred CceEEEEecCCCCCCccCeEEEEEeccCCCCCCCChhhhhhhHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHhhc
Q 047991 68 SSLTLNIQDGPQAGQSVPHVHIHIVPRKESDFENNDEIYDALDVKEKELKKKLDLDEERKDRSPEERIQEANEYRSLF 145 (146)
Q Consensus 68 ~~~ni~~n~g~~~gq~v~H~HiHIIPR~~~d~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (146)
+++|+.. +||+|+|+|+|||||+.+|..+ |. ++ +...+++++++.+++||+.|
T Consensus 82 ~~~n~~~-----~gq~v~HlH~HiiPr~~~d~~~----~~---------------~~-~~~~~~~~l~~~~~~l~~~l 134 (138)
T 3p0t_A 82 ERSGLII-----AGLEVPHLHVHVFPTRSLSDFG----FA---------------NV-DRNPSPESLDEAQAKIKAAL 134 (138)
T ss_dssp SEEEEEE-----CCSSCSSCCEEEEEESCGGGSS----ST---------------TC-CSSCCHHHHHHHHHHHHHHH
T ss_pred CCCcEEE-----CCcccCEEEEEEeccccCCCCc----cc---------------CC-CCCCCHHHHHHHHHHHHHHH
Confidence 9999964 7999999999999999985321 10 11 34568899999999998876
No 12
>2oik_A Histidine triad (HIT) protein; HIT-like fold, structural genomics, joint center for structu genomics, JCSG; HET: MSE; 1.65A {Methylobacillus flagellatus} SCOP: d.13.1.1
Probab=99.93 E-value=6.5e-26 Score=166.08 Aligned_cols=94 Identities=22% Similarity=0.332 Sum_probs=85.3
Q ss_pred CccceecccccCCccEEEECCcEEEEEeCCC-----------cccCCCCCCCHHHHHHHHHHHHHHHHHhhhhcCCCceE
Q 047991 3 IEYYQFGPHKIDAKDVFYTTPLSFVMVNLRP-----------REVKRFADLTADEICDLWLTARKVGRQLEVYHKASSLT 71 (146)
Q Consensus 3 ~~~~~f~~~~ip~~~vv~e~d~~~af~di~P-----------~H~~~~~dL~~ee~~~l~~~~~~v~~~l~~~~~~~~~n 71 (146)
|..|.||. .+| +++||||++++||+|++| +|+.++.+|+++++.+|+.+++++.+++++.+++++||
T Consensus 9 ~~~C~FC~-~~~-~~iv~e~~~~~a~~d~~p~~pgh~LViPk~H~~~l~dL~~~~~~~l~~~~~~v~~~l~~~~~~~g~n 86 (154)
T 2oik_A 9 HKNCELCT-TAG-GEILWQDALCRVVHVENQDYPGFCRVILNRHVKEMSDLRPAERDHLMLVVFAVEEAVREVMRPDKIN 86 (154)
T ss_dssp CTTCHHHH-SCC-SEEEEECSSEEEEECCCTTCTTCEEEEESSCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHCCSEEE
T ss_pred CCCCccCC-CCC-CeEEEECCcEEEEEcCCCCCCeEEEEEecCCcCChHHCCHHHHHHHHHHHHHHHHHHHHHhCCCcEE
Confidence 45799998 454 899999999999999888 89999999999999999999999999999999999999
Q ss_pred EEEecCCCCCCccCeEEEEEeccCCCCCCCCh
Q 047991 72 LNIQDGPQAGQSVPHVHIHIVPRKESDFENND 103 (146)
Q Consensus 72 i~~n~g~~~gq~v~H~HiHIIPR~~~d~~~~~ 103 (146)
++ .+||+|+|+|+|||||+.+|..+..
T Consensus 87 i~-----~~gq~v~HlHiHiiPr~~~d~~~~~ 113 (154)
T 2oik_A 87 LA-----SLGNMTPHVHWHVIPRFKRDRHFPN 113 (154)
T ss_dssp EE-----ECCSSSCSCEEEEEEECTTSSSTTS
T ss_pred hH-----HhCCCCCEEEEEEeCCCCCCCCCCc
Confidence 98 3789999999999999998865443
No 13
>3ano_A AP-4-A phosphorylase; diadenosine polyphosphate, HIT transferase; HET: PG4; 1.89A {Mycobacterium tuberculosis}
Probab=99.92 E-value=3.9e-25 Score=170.89 Aligned_cols=117 Identities=25% Similarity=0.318 Sum_probs=97.4
Q ss_pred ccceeccccc---CCccEEEECCcEEEEEeCCC-----------cccCCCCCCCHHHHHHHHHHHHHHHHHhhhhcCCCc
Q 047991 4 EYYQFGPHKI---DAKDVFYTTPLSFVMVNLRP-----------REVKRFADLTADEICDLWLTARKVGRQLEVYHKASS 69 (146)
Q Consensus 4 ~~~~f~~~~i---p~~~vv~e~d~~~af~di~P-----------~H~~~~~dL~~ee~~~l~~~~~~v~~~l~~~~~~~~ 69 (146)
..|.||+..- .++++||||++++||+|++| +|+.++.+|+++++.+|+.+++++.+++++.++++|
T Consensus 69 ~~CiFC~i~~~e~~~~~iV~edd~~~afld~~P~~pGH~LVIPkrHv~~l~dL~~ee~~~L~~l~~~v~~~l~~~~~~~g 148 (218)
T 3ano_A 69 PAQPFTEIPQLSDEEGLVVARGKLVYAVLNLYPYNPGHLMVVPYRRVSELEDLTDLESAELMAFTQKAIRVIKNVSRPHG 148 (218)
T ss_dssp -CCHHHHGGGSCHHHHTEEEECSSEEEEECSSCSSTTCEEEEESSCCCCGGGSCHHHHHHHHHHHHHHHHHHHHHCCCSE
T ss_pred CCCcCcccccCCCCCceEEEECCcEEEEEccCCCCCcEEEEEechhhCChhhCCHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 4799998632 13699999999999999988 899999999999999999999999999999999999
Q ss_pred eEEEEecCCCCCCcc-CeEEEEEeccCCCCCCCC------hhhhhhhHHHHHHHHhhc
Q 047991 70 LTLNIQDGPQAGQSV-PHVHIHIVPRKESDFENN------DEIYDALDVKEKELKKKL 120 (146)
Q Consensus 70 ~ni~~n~g~~~gq~v-~H~HiHIIPR~~~d~~~~------~~~~~~l~~~~~~l~~~~ 120 (146)
||+++|+|+.+||+| +|+|+|||||+.+|..+. ....+.++..+++|++++
T Consensus 149 ~ni~~n~G~~aGq~V~~HlHiHIIPR~~gd~~f~~v~g~~~~~~~~l~~~~~~Lr~al 206 (218)
T 3ano_A 149 FNVGLNLGTSAGGSLAEHLHVHVVPRWGGDANFITIIGGSKVIPQLLRDTRRLLATEW 206 (218)
T ss_dssp EEEEEEESGGGTCTTTTSCCEEEEEECTTGGGCCCCC-----CCHHHHHHHHHHHHHH
T ss_pred EEEEEecCcccCCcccCEEEEEEEcccCCCCCcccccccccCCHHHHHHHHHHHHHHH
Confidence 999999999999999 999999999999885332 122234555555555554
No 14
>3n1s_A HIT-like protein HINT; histidine triad nucleotide binding protein, GMP, hydro; HET: 5GP; 1.45A {Escherichia coli} SCOP: d.13.1.0 PDB: 3n1t_A*
Probab=99.91 E-value=2.9e-25 Score=156.50 Aligned_cols=94 Identities=19% Similarity=0.251 Sum_probs=78.0
Q ss_pred Cccceeccc---ccCCccEEEECCcEEEEEeCCC-----------cccCCCCCCCHHHHHHHHHHHHHHHHHhhh-hcCC
Q 047991 3 IEYYQFGPH---KIDAKDVFYTTPLSFVMVNLRP-----------REVKRFADLTADEICDLWLTARKVGRQLEV-YHKA 67 (146)
Q Consensus 3 ~~~~~f~~~---~ip~~~vv~e~d~~~af~di~P-----------~H~~~~~dL~~ee~~~l~~~~~~v~~~l~~-~~~~ 67 (146)
++.|.||+. ++| +++||||++++||+|++| +|++++.||+++++..++.+++.+.+.+++ .+++
T Consensus 2 ~~~CiFC~I~~ge~~-~~iv~ede~~~af~d~~P~~pgH~LViPk~Hv~~l~dL~~~e~~~l~~l~~~~~~v~~~~~~~~ 80 (119)
T 3n1s_A 2 AEETIFSKIIRREIP-SDIVYQDDLVTAFRDISPQAPTHILIIPNILIPTVNDVSAEHEQALGRMITVAAKIAEQEGIAE 80 (119)
T ss_dssp CCCCHHHHHHTTSSC-CCEEEECSSEEEEECSSCSSSEEEEEEESSCCCSGGGCCGGGHHHHHHHHHHHHHHHHHTTCTT
T ss_pred CCCChhhhhhcCCCc-CCEEEECCCEEEEECCCCCCCCeEEEEehhHhCCHhHcCHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 468999974 666 799999999999999988 999999999999666555555444333333 4789
Q ss_pred CceEEEEecCCCCCCccCeEEEEEeccCCC
Q 047991 68 SSLTLNIQDGPQAGQSVPHVHIHIVPRKES 97 (146)
Q Consensus 68 ~~~ni~~n~g~~~gq~v~H~HiHIIPR~~~ 97 (146)
+|||+++|+|+.+||+|+|+|+|||||++-
T Consensus 81 ~g~ni~~n~g~~agq~V~HlH~Hiipr~~~ 110 (119)
T 3n1s_A 81 DGYRLIMNTNRHGGQEVYHIHMHLLGGRPL 110 (119)
T ss_dssp TCEEEEEEEHHHHTCCSSSCCEEEEESSCC
T ss_pred CCeEEEEeCCCCcCCCcCEEEEEEeCCccc
Confidence 999999999999999999999999999853
No 15
>4egu_A Histidine triad (HIT) protein; structural genomics, center for structural genomics of infec diseases, csgid, HIT domain, unknown function; HET: 5GP; 0.95A {Clostridium difficile}
Probab=99.91 E-value=6.8e-25 Score=154.15 Aligned_cols=97 Identities=18% Similarity=0.228 Sum_probs=80.5
Q ss_pred CCCccceeccc---ccCCccEEEECCcEEEEEeCCC-----------cccCCCCCCCHHHHHHHHHHHHHHHHHhhhh-c
Q 047991 1 MSIEYYQFGPH---KIDAKDVFYTTPLSFVMVNLRP-----------REVKRFADLTADEICDLWLTARKVGRQLEVY-H 65 (146)
Q Consensus 1 ~~~~~~~f~~~---~ip~~~vv~e~d~~~af~di~P-----------~H~~~~~dL~~ee~~~l~~~~~~v~~~l~~~-~ 65 (146)
|+...|.||+. ++| +++||||++++||+|++| +|++++.+|+++++..++.+++.+.+..+.. +
T Consensus 1 m~~~~C~FC~i~~~e~~-~~iv~e~e~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~~e~~~l~~~~~~~~~~~~~~~~ 79 (119)
T 4egu_A 1 MERMDCIFCKIANGEIP-STKVYEDDRVLAFNDLNPVAPYHILVVPKKHYDSLIDIPDKEMDIVSHIHVVINKIAKEKGF 79 (119)
T ss_dssp -CCTTCHHHHHHTTSSC-CCEEEECSSEEEEECSSCSSSEEEEEEESSCCSSGGGSCGGGTHHHHHHHHHHHHHHHHHTH
T ss_pred CCCCCccCeecccCCCC-CCEEEECCCEEEEECCCCCCCceEEEEechhhCCHhHCCHhHHHHHHHHHHHHHHHHHHhCC
Confidence 88889999986 555 799999999999999988 9999999999997777777766443333332 3
Q ss_pred CCCceEEEEecCCCCCCccCeEEEEEeccCCCC
Q 047991 66 KASSLTLNIQDGPQAGQSVPHVHIHIVPRKESD 98 (146)
Q Consensus 66 ~~~~~ni~~n~g~~~gq~v~H~HiHIIPR~~~d 98 (146)
++++||+++|+|+.+||+|+|+|+|||||+...
T Consensus 80 ~~~~~ni~~n~g~~agq~v~HlH~Hiip~~~~~ 112 (119)
T 4egu_A 80 DQTGFRVINNCGSDGGQEVKHLHYHILAGKKLP 112 (119)
T ss_dssp HHHCEEEEEEETTTTTCCSCSCCEEEEESSCCC
T ss_pred CCCCEEEEEeCCCCCCCCcCEEEEEEeCCcccC
Confidence 578999999999999999999999999998643
No 16
>3oj7_A Putative histidine triad family protein; hydrolase, structural genomics, seattle structural genomics for infectious disease, ssgcid; 1.40A {Entamoeba histolytica} SCOP: d.13.1.0 PDB: 3omf_A* 3oxk_A*
Probab=99.90 E-value=3.3e-24 Score=150.31 Aligned_cols=93 Identities=19% Similarity=0.262 Sum_probs=77.6
Q ss_pred Ccc-ceeccc---ccCCccEEEECCcEEEEEeCCC-----------cccCCCCCCCHHHHHHHHHHHHHHHHHhhhhcCC
Q 047991 3 IEY-YQFGPH---KIDAKDVFYTTPLSFVMVNLRP-----------REVKRFADLTADEICDLWLTARKVGRQLEVYHKA 67 (146)
Q Consensus 3 ~~~-~~f~~~---~ip~~~vv~e~d~~~af~di~P-----------~H~~~~~dL~~ee~~~l~~~~~~v~~~l~~~~~~ 67 (146)
|+. |.||+. ++| +++||||++++||+|++| +|++++.||+++++..++.+++.+.+.+++.++
T Consensus 5 m~~~CiFC~i~~~e~~-~~iv~e~~~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~~e~~~l~~l~~~~~~~~~~~~~- 82 (117)
T 3oj7_A 5 MADSCIFCKIAQKQIP-STIVYEDDEIFAFKDINPIAPIHILVIPKQHIASLNEITEENEAFIGKVLYKVSLIGKKECP- 82 (117)
T ss_dssp ----CHHHHHHTTSSC-CCEEEECSSEEEEECSSCSSSEEEEEEESSCCCSGGGCCTTTHHHHHHHHHHHHHHHHHHCT-
T ss_pred cCCCCcccccccCCCC-CCEEEECCcEEEEECCCCCCCceEEEEechHhCCHHHCCHHHHHHHHHHHHHHHHHHHhcCC-
Confidence 555 999997 455 799999999999999988 999999999999877777777755555554454
Q ss_pred CceEEEEecCCCCCCccCeEEEEEeccCCC
Q 047991 68 SSLTLNIQDGPQAGQSVPHVHIHIVPRKES 97 (146)
Q Consensus 68 ~~~ni~~n~g~~~gq~v~H~HiHIIPR~~~ 97 (146)
++||+++|+|+.+||+|+|+|+|||||..-
T Consensus 83 ~g~ni~~n~g~~agq~v~H~H~Hiipr~~~ 112 (117)
T 3oj7_A 83 EGYRVVNNIGEDAGQTVKHIHFHILGGKKL 112 (117)
T ss_dssp TCEEEECCCSTTTTCCSSSCCEEEEESSCC
T ss_pred CCeEEEEcCCCCCCeeeeEEEEEEeCCCCC
Confidence 499999999999999999999999999864
No 17
>3ohe_A Histidine triad (HIT) protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.20A {Marinobacter aquaeolei}
Probab=99.90 E-value=3.4e-23 Score=149.51 Aligned_cols=110 Identities=12% Similarity=0.215 Sum_probs=97.6
Q ss_pred ccEEEECCcEEEEEeCCC-----------cccCCCCCCCHHHHHHHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCcc
Q 047991 16 KDVFYTTPLSFVMVNLRP-----------REVKRFADLTADEICDLWLTARKVGRQLEVYHKASSLTLNIQDGPQAGQSV 84 (146)
Q Consensus 16 ~~vv~e~d~~~af~di~P-----------~H~~~~~dL~~ee~~~l~~~~~~v~~~l~~~~~~~~~ni~~n~g~~~gq~v 84 (146)
+.+|++++.++++++..| +|++++.||++++..+++..++++++++++.++++++|++ .+||+|
T Consensus 13 ~~~v~~~~~~~v~l~~~p~~pGh~lV~~k~h~~~l~dl~~~~~~~l~~~~~~v~~~l~~~~~~~~~N~~-----~aGq~V 87 (137)
T 3ohe_A 13 THKLGESRLCDVLLMNDNTWPWVILVPRVSGIREIYELPNEQQQRLLFESSALSEGMMELFGGDKMNVA-----ALGNMV 87 (137)
T ss_dssp EEEEEECSSEEEEEESCTTSCEEEEEESCTTCCSGGGSCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEE-----ECCSSC
T ss_pred cEEEEECCcEEEEEcCCCCCCEEEEEecccccCChHHCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEe-----eccCcC
Confidence 478999999999999877 8999999999999999999999999999999999999998 489999
Q ss_pred CeEEEEEeccCCCCCCCChhhhhhhHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHhhc
Q 047991 85 PHVHIHIVPRKESDFENNDEIYDALDVKEKELKKKLDLDEERKDRSPEERIQEANEYRSLF 145 (146)
Q Consensus 85 ~H~HiHIIPR~~~d~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (146)
+|+|+|||||+.+|..++...|. .+.+...+++++++.++++|+.|
T Consensus 88 ~HlH~HviPR~~~D~~~p~~vw~---------------~~~~~~~~~eel~~~~~~ir~~L 133 (137)
T 3ohe_A 88 PQLHLHHIVRYQGDPAWPGPVWG---------------KQPPVPYTEEQQASVKAKLQPLL 133 (137)
T ss_dssp CSCCEEEEEECTTSTTTTSCCTT---------------SSCCCCCCHHHHHHHHHHHHHHH
T ss_pred CEEEEEEeCCCCCCCCCCccccc---------------CCCCCCCCHHHHHHHHHHHHHHH
Confidence 99999999999999876555452 12345678999999999999876
No 18
>3nrd_A Histidine triad (HIT) protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.06A {Sinorhizobium meliloti}
Probab=99.90 E-value=2.3e-23 Score=150.00 Aligned_cols=110 Identities=17% Similarity=0.158 Sum_probs=98.4
Q ss_pred ccEEEECCcEEEEEeCCC-----------cccCCCCCCCHHHHHHHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCcc
Q 047991 16 KDVFYTTPLSFVMVNLRP-----------REVKRFADLTADEICDLWLTARKVGRQLEVYHKASSLTLNIQDGPQAGQSV 84 (146)
Q Consensus 16 ~~vv~e~d~~~af~di~P-----------~H~~~~~dL~~ee~~~l~~~~~~v~~~l~~~~~~~~~ni~~n~g~~~gq~v 84 (146)
+.+|++++.++++++..| +|++++.||++++..+++..++++++++++.++++++|++ .+||+|
T Consensus 15 ~~~v~~~~~~~v~l~~~~~~p~~lvVpkr~h~~~l~dl~~~~~~~l~~~~~~v~~~l~~~~~~~~~N~~-----~aGq~V 89 (135)
T 3nrd_A 15 GIPIGTLGLCQMRLMNDRRWPWLILVPQRADIKEVFELTPLDQAMLTFETNLVAAGLKKATGAEKINIG-----ALGNIV 89 (135)
T ss_dssp EEEEEECSSEEEEEESCTTSCEEEEEECCTTCCSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCSEEEEE-----ECCSSC
T ss_pred CEEEEECCcEEEEEcCCCCCCEEEEEcCccccCChHHCCHHHHHHHHHHHHHHHHHHHHhcCCCeEEEe-----eccCCC
Confidence 579999999999999766 4999999999999999999999999999999999999998 489999
Q ss_pred CeEEEEEeccCCCCCCCChhhhhhhHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHhhc
Q 047991 85 PHVHIHIVPRKESDFENNDEIYDALDVKEKELKKKLDLDEERKDRSPEERIQEANEYRSLF 145 (146)
Q Consensus 85 ~H~HiHIIPR~~~d~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (146)
+|+|+|||||+.+|..++...|. .+.+...+++++++.++++|+.|
T Consensus 90 ~HlH~HviPR~~~D~~~~~~~~~---------------~~~~~~~~~~el~~~a~~i~~~L 135 (135)
T 3nrd_A 90 RQLHVHVIARREGDPNWPGPVWG---------------FGKAEPWPEEEHRTFAARIMENL 135 (135)
T ss_dssp CSCCEEEEEECTTSTTTTSCSTT---------------CSCCCCCCHHHHHHHHHHHHHHC
T ss_pred CEEEEEEecCCCCCCCCCCcccC---------------CCCCCCCCHHHHHHHHHHHHhhC
Confidence 99999999999999877666563 33456689999999999999875
No 19
>3i24_A HIT family hydrolase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 1.50A {Vibrio fischeri ES114}
Probab=99.90 E-value=3.8e-23 Score=151.34 Aligned_cols=110 Identities=19% Similarity=0.265 Sum_probs=96.8
Q ss_pred ccEEEECCcEEEEEeCCC-----------cccCCCCCCCHHHHHHHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCcc
Q 047991 16 KDVFYTTPLSFVMVNLRP-----------REVKRFADLTADEICDLWLTARKVGRQLEVYHKASSLTLNIQDGPQAGQSV 84 (146)
Q Consensus 16 ~~vv~e~d~~~af~di~P-----------~H~~~~~dL~~ee~~~l~~~~~~v~~~l~~~~~~~~~ni~~n~g~~~gq~v 84 (146)
+.+|++++.+++|++..| +|++++.||++++..+++..++++++++++.++++++|++. +||+|
T Consensus 13 ~~~v~~~~~~~v~L~~~p~~pGh~LV~pk~Hv~~l~dL~~e~~~~l~~~~~~va~al~~~~~~~~~Ni~~-----aGq~V 87 (149)
T 3i24_A 13 CIVLGNLPLCKVLLIKEDIGPWLILVPRIEELKEIHHMTDEQQIQFIKESSAVAQLLEDNFSPDKINIGA-----LGNLV 87 (149)
T ss_dssp EEEEEECSSEEEEEECBSSTTEEEEEESCTTCSSGGGSCHHHHHHHHHHHHHHHHHHHHHHCCSEEEEEE-----CCSSC
T ss_pred CEEEEECCCEEEEEcCCCCCCEEEEEeCccccCChhHCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEhh-----hhCCC
Confidence 578999999999999866 59999999999999999999999999999999999999984 89999
Q ss_pred CeEEEEEeccCCCCCCCChhhhhhhHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHhhc
Q 047991 85 PHVHIHIVPRKESDFENNDEIYDALDVKEKELKKKLDLDEERKDRSPEERIQEANEYRSLF 145 (146)
Q Consensus 85 ~H~HiHIIPR~~~d~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (146)
+|+|+|||||+.+|..+....|. .+.+...+++++++.+++||+.|
T Consensus 88 ~HlH~HvIPR~~~D~~~~~~vw~---------------~~~~~~~~~eel~~~a~kIr~~L 133 (149)
T 3i24_A 88 PQLHIHHIARFTTDVAWPGPVWG---------------NTTGVIRAQSSQTQLVDLLRDKL 133 (149)
T ss_dssp CSCCEEEEEECTTSTTTTSCSTT---------------CSCCCBCCHHHHHHHHHHHHHHH
T ss_pred CEEEEEEeCCccCCCCCCcceec---------------CCCCCCCCHHHHHHHHHHHHHHH
Confidence 99999999999999876655553 22345578899999999998876
No 20
>3o1c_A Histidine triad nucleotide-binding protein 1; hydrolase, HINT protein, HIT protein, adenosine 5'- monophosphoramidase; HET: ADN; 1.08A {Oryctolagus cuniculus} SCOP: d.13.1.1 PDB: 3llj_A* 1rzy_A* 3qgz_A* 3o1z_A 3o1x_A* 4eqe_A* 4eqg_A* 4eqh_A* 3tw2_A* 1kpb_A 1kpf_A* 1kpa_A 1kpc_A 1av5_A* 1kpe_A* 4rhn_A* 3rhn_A* 5rhn_A* 6rhn_A
Probab=99.89 E-value=4.4e-24 Score=151.75 Aligned_cols=95 Identities=15% Similarity=0.236 Sum_probs=78.0
Q ss_pred CCccceeccc---ccCCccEEEECCcEEEEEeCCC-----------cccCCCCCCCHHHHHHHHHHHHHHHHHhhhhcCC
Q 047991 2 SIEYYQFGPH---KIDAKDVFYTTPLSFVMVNLRP-----------REVKRFADLTADEICDLWLTARKVGRQLEVYHKA 67 (146)
Q Consensus 2 ~~~~~~f~~~---~ip~~~vv~e~d~~~af~di~P-----------~H~~~~~dL~~ee~~~l~~~~~~v~~~l~~~~~~ 67 (146)
.+..|.||+. ++| +++||||++++||+|++| +|+.++.+|++++...++.+++.+.+.++....+
T Consensus 13 ~~~~CiFC~i~~~e~~-~~iv~e~e~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~~e~~~l~~l~~~~~~~~~~~~~~ 91 (126)
T 3o1c_A 13 PGGDTIFGKIIRKEIP-AKIIFEDDQALAFHDISPQAPTHFLVIPKKHISQISAAEDADESLLGHLMIVGKKCAADLGLK 91 (126)
T ss_dssp TTCSSHHHHHHHTSSC-CCEEEECSSEEEEECSSCSSSEEEEEEESSCCCCGGGCCGGGHHHHHHHHHHHHHHHHHTTCT
T ss_pred CCCCCCcchhhcCCCc-CCEEEECCCEEEEECCCCCCCceEEEEechHhchHhhCchhHHHHHHHHHHHHHHHHHHhCCC
Confidence 3568999987 676 799999999999999988 8999999999988666666554333333333346
Q ss_pred CceEEEEecCCCCCCccCeEEEEEeccCCC
Q 047991 68 SSLTLNIQDGPQAGQSVPHVHIHIVPRKES 97 (146)
Q Consensus 68 ~~~ni~~n~g~~~gq~v~H~HiHIIPR~~~ 97 (146)
+|||+++|+|+.+||+|+|+|+|||||..-
T Consensus 92 ~g~ni~~n~g~~agq~v~HlH~Hiipr~~~ 121 (126)
T 3o1c_A 92 KGYRMVVNEGSDGGQSVYHVHLHVLGGRQM 121 (126)
T ss_dssp TCEEEECCCHHHHTCCSSSCCEEEEESSCC
T ss_pred CCeEEEEecCCccCCccCEeEEEEeCCccc
Confidence 799999999999999999999999999763
No 21
>1xqu_A HIT family hydrolase; protein STRU initiative, PSI, southeast collaboratory for structural GEN secsg; 2.30A {Clostridium thermocellum} SCOP: d.13.1.1
Probab=99.87 E-value=6.4e-23 Score=149.70 Aligned_cols=94 Identities=15% Similarity=0.259 Sum_probs=77.5
Q ss_pred CCccceeccc---ccCCccEEEECCcEEEEEeCCC-----------cccCCCCCCCHHHHHHHHHHHHHHHHHhhhhcC-
Q 047991 2 SIEYYQFGPH---KIDAKDVFYTTPLSFVMVNLRP-----------REVKRFADLTADEICDLWLTARKVGRQLEVYHK- 66 (146)
Q Consensus 2 ~~~~~~f~~~---~ip~~~vv~e~d~~~af~di~P-----------~H~~~~~dL~~ee~~~l~~~~~~v~~~l~~~~~- 66 (146)
.|+.|.||+. ++| +++||||++++||+|++| +|+.++.+|++++..+++.+++.+ +++.+.++
T Consensus 33 ~m~~CiFC~ii~~e~~-~~iV~e~e~~~af~d~~P~~pgH~LViPkrHv~~l~dL~~~e~~~l~~l~~~~-~~v~~~~~~ 110 (147)
T 1xqu_A 33 TLENCVFCKIIKRELP-STIYYEDERVIAIKDINPAAPVHVLIIPKEHIANVKEINESNAQILIDIHKAA-NKVAEDLGI 110 (147)
T ss_dssp -CTTCHHHHHHTTSSC-BCEEEECSSEEEEECSSCSSSEEEEEEESSCCSSGGGCCTTTTTHHHHHHHHH-HHHHHHTTC
T ss_pred ccCCCcccccccCCCC-cEEEEECCcEEEEEecCCCCccEEEEEeCcccCChhHCCHHHHHHHHHHHHHH-HHHHHHhCC
Confidence 3578999986 565 799999999999999988 999999999998876676666633 33333344
Q ss_pred -CCceEEEEecCCCCCCccCeEEEEEeccCCC
Q 047991 67 -ASSLTLNIQDGPQAGQSVPHVHIHIVPRKES 97 (146)
Q Consensus 67 -~~~~ni~~n~g~~~gq~v~H~HiHIIPR~~~ 97 (146)
+++||+++|+|+.+||+|+|+|+|||||++-
T Consensus 111 ~~~gyni~~n~g~~aGq~v~HlHlHiiP~~~~ 142 (147)
T 1xqu_A 111 AEKGYRLITNCGVAAGQTVFHLHYHLLGGVDM 142 (147)
T ss_dssp TTTCEEEECCCSTTTTCCSCSCCEEEEESSCC
T ss_pred CCCCEEEEEecCcccCCCccEEEEEEeCCCcC
Confidence 6799999999999999999999999999863
No 22
>3i4s_A Histidine triad protein; hydrolase, phosphatase, HIT superfamily, PSI-2, NYSGXRC, STR genomics, protein structure initiative; 1.75A {Bradyrhizobium japonicum}
Probab=99.86 E-value=3e-21 Score=141.23 Aligned_cols=111 Identities=22% Similarity=0.279 Sum_probs=96.7
Q ss_pred ccEEEECCcEEEEEeCCC----------c-ccCCCCCCCHHHHHHHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCcc
Q 047991 16 KDVFYTTPLSFVMVNLRP----------R-EVKRFADLTADEICDLWLTARKVGRQLEVYHKASSLTLNIQDGPQAGQSV 84 (146)
Q Consensus 16 ~~vv~e~d~~~af~di~P----------~-H~~~~~dL~~ee~~~l~~~~~~v~~~l~~~~~~~~~ni~~n~g~~~gq~v 84 (146)
+.++.+...+++++...| + |++++.||+++++.+++.+++++++++++.++++|+|++ .+||+|
T Consensus 18 ~~~~~e~p~~~v~l~~~~~~~H~LVIPk~~H~~~l~dL~~e~~~~l~~~~~~va~~l~~~~~~~g~N~~-----~aGq~V 92 (149)
T 3i4s_A 18 TIDIGDLPLSKVLVIKDANYPWLLLVPRRPDAVEIIDLDEVQQAQLMTEISRVSRALKEITKCDKLNIA-----ALGNLV 92 (149)
T ss_dssp EEEEEECSSEEEEEESCTTSCEEEEEECCTTCCSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCSEEEEE-----ECCSSC
T ss_pred CEEEEEcCceEEEECCCCCCCEEEEEecccccCChhHCCHHHHHHHHHHHHHHHHHHHHhcCCCeEEEe-----ecCCcC
Confidence 468899999999987533 7 899999999999999999999999999999999999997 489999
Q ss_pred CeEEEEEeccCCCCCCCChhhhhhhHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHhhcC
Q 047991 85 PHVHIHIVPRKESDFENNDEIYDALDVKEKELKKKLDLDEERKDRSPEERIQEANEYRSLFL 146 (146)
Q Consensus 85 ~H~HiHIIPR~~~d~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (146)
+|+|+||||||.+|..++.+.|.. ..+...++|++++.+++||+.|.
T Consensus 93 ~HlH~HvIPR~~~D~~~p~pvw~~---------------~~~~~~~~eel~~~a~~Ir~~L~ 139 (149)
T 3i4s_A 93 PQLHVHIIARRTGDAAWPRPVWGV---------------MQPLAHDATEVQNFISALRRKIW 139 (149)
T ss_dssp CSCCEEEEEECTTSTTTTSCCTTT---------------SCCCCCCHHHHHHHHHHHHHHHC
T ss_pred CEEEEEEECCcCCCCCCCccccCC---------------CcCCCCCHHHHHHHHHHHHHHHh
Confidence 999999999999998776665642 23556799999999999998763
No 23
>1z84_A Galactose-1-phosphate uridyl transferase-like protein; GALT, zinc, AMP, structural genomics, protein structure initiative, CESG; HET: AMP; 1.83A {Arabidopsis thaliana} SCOP: d.13.1.2 d.13.1.2 PDB: 1zwj_A 2q4h_A* 2q4l_A 2h39_A*
Probab=99.80 E-value=3.4e-19 Score=146.00 Aligned_cols=94 Identities=13% Similarity=0.072 Sum_probs=84.6
Q ss_pred ccceecccccCCccEEEECCcEEEEEeCCC-----------cccCCCCCCCHHHHHHHHHHHHHHHHHhhhhcCCCceEE
Q 047991 4 EYYQFGPHKIDAKDVFYTTPLSFVMVNLRP-----------REVKRFADLTADEICDLWLTARKVGRQLEVYHKASSLTL 72 (146)
Q Consensus 4 ~~~~f~~~~ip~~~vv~e~d~~~af~di~P-----------~H~~~~~dL~~ee~~~l~~~~~~v~~~l~~~~~~~~~ni 72 (146)
..|.||++.-- +.+|+||++|+||+|+.| +|+.++.+|+++++.+|+.+++++.+++.+.+++++||+
T Consensus 214 ~~ciFc~ii~~-E~iV~E~e~~~af~~~~p~~P~h~lViPk~Hv~~l~dl~~~e~~~La~~l~~v~~~l~~~~~~~~yn~ 292 (351)
T 1z84_A 214 GKCCLCEAKSK-HFVIDESSHFVSVAPFAATYPFEIWIIPKDHSSHFHHLDDVKAVDLGGLLKLMLQKIAKQLNDPPYNY 292 (351)
T ss_dssp SSCTTTTHHHH-SEEEEECSSEEEEECTTCSSTTCEEEEESSCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHTTSCCEEE
T ss_pred CCCHHHHHHhc-CeEEecCCcEEEEeccCCCCCeEEEEEeccccCChHHCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEE
Confidence 46899986322 239999999999999877 899999999999999999999999999999999999999
Q ss_pred EEecCCCCC----CccCeEEEEEeccCCCC
Q 047991 73 NIQDGPQAG----QSVPHVHIHIVPRKESD 98 (146)
Q Consensus 73 ~~n~g~~~g----q~v~H~HiHIIPR~~~d 98 (146)
++|+|+.+| |.++|+|+||+||++..
T Consensus 293 ~~n~gp~~g~~~~q~v~HlHiHiiPR~~~~ 322 (351)
T 1z84_A 293 MIHTSPLKVTESQLPYTHWFLQIVPQLSGV 322 (351)
T ss_dssp EEECCCTTCCGGGGGGCCCEEEEEECCCCC
T ss_pred EEeCCCccCCCCCCccceEEEEEEccCCCc
Confidence 999999887 79999999999999654
No 24
>1gup_A Galactose-1-phosphate uridylyltransferase; nucleotidyltransferase, galactose metabolism; HET: GDU; 1.80A {Escherichia coli} SCOP: d.13.1.2 d.13.1.2 PDB: 1guq_A* 1hxq_A* 1hxp_A*
Probab=99.80 E-value=6.4e-20 Score=150.04 Aligned_cols=104 Identities=17% Similarity=0.186 Sum_probs=89.2
Q ss_pred ccceeccc---ccC-CccEEEECCcEEEEEeCCC-----------cccCCCCCCCHHHHHHHHHHHHHHHHHhhhhcCCC
Q 047991 4 EYYQFGPH---KID-AKDVFYTTPLSFVMVNLRP-----------REVKRFADLTADEICDLWLTARKVGRQLEVYHKAS 68 (146)
Q Consensus 4 ~~~~f~~~---~ip-~~~vv~e~d~~~af~di~P-----------~H~~~~~dL~~ee~~~l~~~~~~v~~~l~~~~~~~ 68 (146)
..|.||++ +++ ..++|+||++|+||+++.| +|+.++.+|+++++.+|+.+++++++++.+.++++
T Consensus 194 ~~Cifc~ii~~E~~~~~~iV~E~e~~~af~~~~p~~pgh~lViPK~Hv~~l~dL~~~e~~~La~~l~~v~~~l~~~~~~~ 273 (348)
T 1gup_A 194 KSPMLVDYVQRELADGSRTVVETEHWLAVVPYWAAWPFETLLLPKAHVLRITDLTDAQRSDLALALKKLTSRYDNLFQCS 273 (348)
T ss_dssp SSCHHHHHHHHHHHHCTTEEEECSSEEEECCTTCCSTTCEEEEESSCCSSGGGCCHHHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred CCCchhHHHhhccccCceEEEeCCcEEEEEccCCCCceEEEEEeCcccCChHHCCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 46889975 444 2499999999999999887 89999999999999999999999999999999997
Q ss_pred -ceEEEEecCCCC--CCccCeEEEEEec---cCCCCCCCChhhhhh
Q 047991 69 -SLTLNIQDGPQA--GQSVPHVHIHIVP---RKESDFENNDEIYDA 108 (146)
Q Consensus 69 -~~ni~~n~g~~~--gq~v~H~HiHIIP---R~~~d~~~~~~~~~~ 108 (146)
+||+++|.++.. ||+++|+|+||+| |+.++.. ....|+.
T Consensus 274 ~~Yn~g~~~~p~~g~~q~v~HlHiHiiPpl~R~~~~~~-~~~g~e~ 318 (348)
T 1gup_A 274 FPYSMGWHGAPFNGEENQHWQLHAHFYPPLLRSATVRK-FMVGYEM 318 (348)
T ss_dssp CCEEEEEECCCSSSSCCTTCCCEEEEECCBCSSSSCBC-CCCTHHH
T ss_pred CCeEEEEEeCCCCCCCCcccEEEEEEecchhccCCccc-ceeeEec
Confidence 999999999875 4899999999999 9987632 2334554
No 25
>3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A*
Probab=98.74 E-value=2.4e-09 Score=81.57 Aligned_cols=85 Identities=15% Similarity=0.201 Sum_probs=54.3
Q ss_pred EEEECCcEEEEEeCCC-----------cccCCCCCCCH------HHHHHHHHHHH-HHHH-Hhhh------hc-CC----
Q 047991 18 VFYTTPLSFVMVNLRP-----------REVKRFADLTA------DEICDLWLTAR-KVGR-QLEV------YH-KA---- 67 (146)
Q Consensus 18 vv~e~d~~~af~di~P-----------~H~~~~~dL~~------ee~~~l~~~~~-~v~~-~l~~------~~-~~---- 67 (146)
+|||||.++||.|++| +|+.++.++.+ +.+..|..+++ ++.+ .... .+ +.
T Consensus 23 ~v~edd~~~af~D~~P~a~~H~LVIPk~h~~~~~~p~~al~d~~~Ll~~m~~la~~~~l~~~~~~~~~~~~~~~~~~~~~ 102 (204)
T 3sp4_A 23 VIYYDDDVVLVRDMFPKSKMHLLLMTRDPHLTHVHPLEIMMKHRSLVEKLVSYVQGDLSGLIFDEARNCLSQQLTNEALC 102 (204)
T ss_dssp EEEECSSEEEEECSSCSSSSEEEEEECCTTTTTSCHHHHHHHCHHHHHHHHHHHHTTTHHHHHHHHHHHSCTTCCHHHHH
T ss_pred EEEEcCCEEEEeCCCCCCCccEEEEeccccCcccchhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCcCCee
Confidence 9999999999999999 78888776543 22444444444 3222 2110 01 11
Q ss_pred CceEEEEecCCCCCCccCeEEEEEeccC-CCCCCCChhhh
Q 047991 68 SSLTLNIQDGPQAGQSVPHVHIHIVPRK-ESDFENNDEIY 106 (146)
Q Consensus 68 ~~~ni~~n~g~~~gq~v~H~HiHIIPR~-~~d~~~~~~~~ 106 (146)
..+|++++ +++++.|+|+|||-+. ..+-.++-.-|
T Consensus 103 ~~i~~GfH----a~PSm~HLHLHVIS~Df~s~~lK~kkH~ 138 (204)
T 3sp4_A 103 NYIKVGFH----AGPSMNNLHLHIMTLDHVSPSLKNSAHY 138 (204)
T ss_dssp TTEEEEEE----SSCSSSSCCEEEEESCCCCTTCCSHHHH
T ss_pred eeEeccCC----CCCcccceeEEEeccCCCChhhCccchh
Confidence 14677776 5679999999999975 34434444444
No 26
>1z84_A Galactose-1-phosphate uridyl transferase-like protein; GALT, zinc, AMP, structural genomics, protein structure initiative, CESG; HET: AMP; 1.83A {Arabidopsis thaliana} SCOP: d.13.1.2 d.13.1.2 PDB: 1zwj_A 2q4h_A* 2q4l_A 2h39_A*
Probab=98.17 E-value=8.8e-06 Score=66.32 Aligned_cols=60 Identities=18% Similarity=0.280 Sum_probs=56.0
Q ss_pred cccCCCCCCCHHHHHHHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccCeEEEEEec
Q 047991 34 REVKRFADLTADEICDLWLTARKVGRQLEVYHKASSLTLNIQDGPQAGQSVPHVHIHIVP 93 (146)
Q Consensus 34 ~H~~~~~dL~~ee~~~l~~~~~~v~~~l~~~~~~~~~ni~~n~g~~~gq~v~H~HiHIIP 93 (146)
+|..++.+|+.+++.+++.+.+.-.+.|++..+...+++..|.|+.+|-+.+|.|.||+.
T Consensus 132 ~H~~~l~~ls~~e~~~vi~~~~~~~~~L~~~~~~~yv~iF~N~G~~aGaSl~HpH~QI~a 191 (351)
T 1z84_A 132 VHSIQLSDIDPVGIGDILIAYKKRINQIAQHDSINYIQVFKNQGASAGASMSHSHSQMMA 191 (351)
T ss_dssp SSSCCGGGSCHHHHHHHHHHHHHHHHHHTTCTTCCEEEEEEEESGGGTCCCSSCEEEEEE
T ss_pred CCCCCcHHCCHHHHHHHHHHHHHHHHHHhcccCCCEEEEEEEcCcccCCCCcCccceeEe
Confidence 688899999999999999999998888988778899999999999999999999999987
No 27
>3bl9_A Scavenger mRNA-decapping enzyme DCPS; ligand complex, cytoplasm, hydrolase, nonsense-mediated mRNA decay, nucleus, polymorphism, structural genomics; HET: DD2; 1.80A {Homo sapiens} SCOP: d.13.1.3 d.246.1.1 PDB: 3bl7_A* 3bla_A*
Probab=98.06 E-value=7e-06 Score=65.68 Aligned_cols=80 Identities=20% Similarity=0.265 Sum_probs=60.4
Q ss_pred CccEEEECCc----EEEEEeCCC----------------cccCCCCCCCHHHHHHHHHHHHHHHHHhhhhc--CCCceEE
Q 047991 15 AKDVFYTTPL----SFVMVNLRP----------------REVKRFADLTADEICDLWLTARKVGRQLEVYH--KASSLTL 72 (146)
Q Consensus 15 ~~~vv~e~d~----~~af~di~P----------------~H~~~~~dL~~ee~~~l~~~~~~v~~~l~~~~--~~~~~ni 72 (146)
+++|+|+|+. |++|.|+.+ +++.|+.+|..+.+.=|-.+...+.+.+.+.+ +.+.+.+
T Consensus 150 ~e~ilyeD~d~~~gFvllpDlkWd~~~~~~lhlLaI~~~~~I~SlrdL~~~HlpLL~~M~~~~~~~i~~~y~~~~~~~rl 229 (301)
T 3bl9_A 150 ADRIVFENPDPSDGFVLIPDLKWNQQQLDDLYLIAICHRRGIRSLRDLTPEHLPLLRNILHQGQEAILQRYRMKGDHLRV 229 (301)
T ss_dssp GGGCCEEECCTTTCEEEEECTTCCSSCSTTCEEEEEESSSCCCSGGGCCGGGHHHHHHHHHHHHHHHHHHHCCCGGGEEE
T ss_pred cccEEEecCCCCcCEEEeccCccCCCcccccEEEEEecccCCCChHHCCHhHHHHHHHHHHHHHHHHHHhcCCChHHeEE
Confidence 3799999988 999999873 44899999999876555555555555555544 4778999
Q ss_pred EEecCCCCCCccCeEEEEEecc-CCCC
Q 047991 73 NIQDGPQAGQSVPHVHIHIVPR-KESD 98 (146)
Q Consensus 73 ~~n~g~~~gq~v~H~HiHIIPR-~~~d 98 (146)
++|..| ++.|+|+|||-- +.+.
T Consensus 230 gfHy~P----S~yHLHlHvis~~~~s~ 252 (301)
T 3bl9_A 230 YLHYLP----SYYHLHVHFTALGFEAP 252 (301)
T ss_dssp EEESSC----SSSSCEEEEEETTSCCT
T ss_pred EecCCC----CcceEEEEEEecCCCCC
Confidence 999876 678999999974 3443
No 28
>1vlr_A MRNA decapping enzyme; 16740816, structural genomics, JCSG, protein structure initiative, PSI, joint center for structural genomics; 1.83A {Mus musculus} SCOP: d.13.1.3 d.246.1.1 PDB: 1xmm_B* 1xml_B 1st0_B* 1st4_B*
Probab=98.02 E-value=9.4e-06 Score=65.97 Aligned_cols=80 Identities=20% Similarity=0.267 Sum_probs=60.0
Q ss_pred CccEEEECCc----EEEEEeCCC----------------cccCCCCCCCHHHHHHHHHHHHHHHHHhhhhc--CCCceEE
Q 047991 15 AKDVFYTTPL----SFVMVNLRP----------------REVKRFADLTADEICDLWLTARKVGRQLEVYH--KASSLTL 72 (146)
Q Consensus 15 ~~~vv~e~d~----~~af~di~P----------------~H~~~~~dL~~ee~~~l~~~~~~v~~~l~~~~--~~~~~ni 72 (146)
+++|+|+|+. |++|.|+.+ +++.|+.+|..+.+.=|-.+...+.+.+.+.+ ..+.+.+
T Consensus 197 ~e~vlyeD~d~~~gFvllpDlKWd~~~~~~lhlLaI~~~~dI~SlRdL~~~HlpLL~~M~~~~~~ii~~~yg~~~~~lRl 276 (350)
T 1vlr_A 197 ADRIVFENPDPSDGFVLIPDLKWNQQQLDDLYLIAICHRRGIRSLRDLTPEHLPLLRNILREGQEAILKRYQVTGDRLRV 276 (350)
T ss_dssp -CCCSEEECCTTTCEEEEECTTCCSSCSTTCEEEEEESSSCCCSGGGCCGGGHHHHHHHHHHHHHHHHHHHCCCGGGEEE
T ss_pred cccEEEecCCCCCCeEEeccCccCCCccccceEEEEecccCCCChHHCCHhHHHHHHHHHHHHHHHHHHhcCCChHHeEE
Confidence 4699999988 999999873 44899999999876555555555555555544 4778999
Q ss_pred EEecCCCCCCccCeEEEEEecc-CCCC
Q 047991 73 NIQDGPQAGQSVPHVHIHIVPR-KESD 98 (146)
Q Consensus 73 ~~n~g~~~gq~v~H~HiHIIPR-~~~d 98 (146)
+++..| ++.|+|+|||-- +.+.
T Consensus 277 gfHy~P----S~yHLHlHvis~~~~s~ 299 (350)
T 1vlr_A 277 YLHYLP----SYYHLHVHFTALGFEAP 299 (350)
T ss_dssp EEESSC----SSSSCEEEEEETTSCCT
T ss_pred EecCCC----CcceEEEEEEeccCCCC
Confidence 999876 678999999974 3443
No 29
>1gup_A Galactose-1-phosphate uridylyltransferase; nucleotidyltransferase, galactose metabolism; HET: GDU; 1.80A {Escherichia coli} SCOP: d.13.1.2 d.13.1.2 PDB: 1guq_A* 1hxq_A* 1hxp_A*
Probab=96.25 E-value=0.009 Score=48.31 Aligned_cols=58 Identities=17% Similarity=0.175 Sum_probs=49.1
Q ss_pred cccCCCCCCCHHHHHHHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccCeEEEEEec
Q 047991 34 REVKRFADLTADEICDLWLTARKVGRQLEVYHKASSLTLNIQDGPQAGQSVPHVHIHIVP 93 (146)
Q Consensus 34 ~H~~~~~dL~~ee~~~l~~~~~~v~~~l~~~~~~~~~ni~~n~g~~~gq~v~H~HiHIIP 93 (146)
+|-.++.+|+.+++..++.+...-.+.|.. +..-+.+.-|.|+.+|-+.+|-|..|+.
T Consensus 114 ~H~~~l~~l~~~~~~~vi~~~~~r~~~l~~--~~~yV~iF~N~G~~~G~Sl~HpH~Qi~a 171 (348)
T 1gup_A 114 DHSKTLPELSVAALTEIVKTWQEQTAELGK--TYPWVQVFENKGAAMGCSNPHPGGQIWA 171 (348)
T ss_dssp CTTCCGGGSCHHHHHHHHHHHHHHHHHHHH--HCSEEEEEEEESGGGTCSCCSSEEEEEE
T ss_pred cccCChhhCCHHHHHHHHHHHHHHHHHHhh--cCCEEEEecccCCcCCcCCCCCceeEEe
Confidence 788999999999999999998887777763 3445556779999999999999999986
No 30
>3vg8_G Hypothetical protein TTHB210; alpha and beta proteins (A+B), unknown function; 2.20A {Thermus thermophilus}
Probab=89.69 E-value=0.41 Score=32.47 Aligned_cols=26 Identities=27% Similarity=0.470 Sum_probs=21.9
Q ss_pred CCCceEEEEecCCCCCCccCeEEEEEe
Q 047991 66 KASSLTLNIQDGPQAGQSVPHVHIHIV 92 (146)
Q Consensus 66 ~~~~~ni~~n~g~~~gq~v~H~HiHII 92 (146)
..+.++|..|.| ..|-++||+|||+.
T Consensus 75 ~vDHVdi~~~~g-HpGve~PHyhI~l~ 100 (116)
T 3vg8_G 75 RIDHVNMIPSGP-HPGVSEPHYHIELV 100 (116)
T ss_dssp CCCEEEEEECCC-CTTCCSCEEEEEEE
T ss_pred ccceEEEecCCC-CCCcccCceEEEEE
Confidence 578999998744 68999999999986
No 31
>2pof_A CDP-diacylglycerol pyrophosphatase; NYSGXRC, PFAM02611, PSI-2, phospholipid biosynthesis structural genomics, protein structure initiative; 1.40A {Escherichia coli} SCOP: d.13.1.4
Probab=76.81 E-value=4.2 Score=30.98 Aligned_cols=75 Identities=17% Similarity=0.195 Sum_probs=52.1
Q ss_pred ccEEEECCcEEEEEeCC-C--------cc---cCCCCCC---CHHHHHHHHHHHHHHHHHhhhhcCCCceEEEEecCCCC
Q 047991 16 KDVFYTTPLSFVMVNLR-P--------RE---VKRFADL---TADEICDLWLTARKVGRQLEVYHKASSLTLNIQDGPQA 80 (146)
Q Consensus 16 ~~vv~e~d~~~af~di~-P--------~H---~~~~~dL---~~ee~~~l~~~~~~v~~~l~~~~~~~~~ni~~n~g~~~ 80 (146)
+.-|.....+++|-|+. | .. +++..-+ ++..|..-+..-..+.+++.+.+..+.+.+.+|.- .
T Consensus 31 C~~Vd~~~gyvvlKD~~Gp~qyLLmPt~rItGIEsP~Ll~~~~pnYf~~AW~aR~~v~~~~g~pipd~~lsLaINS~--~ 108 (227)
T 2pof_A 31 CAEVKPNAGYVVLKDLNGPLQYLLMPTYRINGTESPLLTDPSTPNFFWLAWQARDFMSKKYGQPVPDRAVSLAINSR--T 108 (227)
T ss_dssp SSEEETTTTEEEEECSSSSSCEEEEESSCCCSTTCGGGGSTTSCCHHHHHHHTTHHHHHHHTSCCCGGGEEEEEBCG--G
T ss_pred CceEccCCCEEEEeCCCCCceEEEeccccccCccChhhcCCCCCcHHHHHHHHhHHHHHhhCCCCCccceEEEecCC--C
Confidence 55666777888887743 3 22 3332223 34567777777777889999988888999999873 5
Q ss_pred CCccCeEEEEEe
Q 047991 81 GQSVPHVHIHIV 92 (146)
Q Consensus 81 gq~v~H~HiHII 92 (146)
|-+-.|+||||-
T Consensus 109 gRSQnQLHIHIs 120 (227)
T 2pof_A 109 GRTQNHFHIHIS 120 (227)
T ss_dssp GCSCCSCCEEEE
T ss_pred Cccccceeeehh
Confidence 666678888863
No 32
>2bf9_A Pancreatic hormone; turkey, pancreas, polypeptide, atomic resolution, anisotropic refinement; HET: TYC; 0.99A {Meleagris gallopavo} SCOP: j.6.1.1 PDB: 1ppt_A 2k76_A 2h3s_B* 2h3t_B* 2h4b_C*
Probab=52.03 E-value=20 Score=19.32 Aligned_cols=24 Identities=17% Similarity=0.146 Sum_probs=18.3
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhhc
Q 047991 122 LDEERKDRSPEERIQEANEYRSLF 145 (146)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~ 145 (146)
++......++|||+.=...||+++
T Consensus 5 P~~PG~dA~~Eela~Y~~~LrhYi 28 (36)
T 2bf9_A 5 PTYPGDDAPVEDLIRFYNDLQQYL 28 (36)
T ss_dssp CCCCCTTSCHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHH
Confidence 344556789999999888888764
No 33
>1bba_A Bovine pancreatic polypeptide; pancreatic hormone; NMR {Bos taurus} SCOP: j.6.1.1 PDB: 1ljv_A 1tz5_A 1v1d_A
Probab=46.53 E-value=15 Score=19.79 Aligned_cols=24 Identities=25% Similarity=0.299 Sum_probs=17.7
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhhc
Q 047991 122 LDEERKDRSPEERIQEANEYRSLF 145 (146)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~ 145 (146)
++......+||||+.=...||+.+
T Consensus 5 P~~PG~dA~pEela~Y~~~Lr~Yi 28 (36)
T 1bba_A 5 PEYPGDNATPEQMAQYAAELRRYI 28 (36)
T ss_dssp CCCCSSCSSTTHHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHH
Confidence 344456778999998888888764
No 34
>3g5g_A Regulatory protein; transcriptional regulator, helix-turn-helix, restriction- modification, transcription regulator; 2.80A {Enterobacter SP} PDB: 3fya_A
Probab=45.02 E-value=29 Score=22.02 Aligned_cols=35 Identities=11% Similarity=0.044 Sum_probs=8.6
Q ss_pred cCeEEEEEeccCCCCCCCChhhhhhhHHHHHHHHh
Q 047991 84 VPHVHIHIVPRKESDFENNDEIYDALDVKEKELKK 118 (146)
Q Consensus 84 v~H~HiHIIPR~~~d~~~~~~~~~~l~~~~~~l~~ 118 (146)
..|||.|..|-......-.....+.+...-+++|+
T Consensus 4 ~~~~~~~~~~~~~~~~~M~~~~~~~ig~~lr~~R~ 38 (99)
T 3g5g_A 4 SHHHHHHSSGLVPRGSHMESFLLSKVSFVIKKIRL 38 (99)
T ss_dssp ------------------CCHHHHHHHHHHHHHHH
T ss_pred ccccccccCCCCCccccccHHHHHHHHHHHHHHHH
Confidence 36999999986654433233444455555555554
No 35
>1omh_A TRWC protein; protein-DNA complex, bacterial conjugation, relaxase, DNA replication, transferase/DNA complex; HET: DNA; 1.95A {Escherichia coli} SCOP: d.89.1.5 PDB: 1osb_A* 1qx0_A* 1s6m_A* 1zm5_A* 2cdm_A
Probab=40.26 E-value=53 Score=25.61 Aligned_cols=50 Identities=22% Similarity=0.122 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHHHHHHhhhh----cCCCceEEEEecCCC---------CCCccCeEEEEEec
Q 047991 44 ADEICDLWLTARKVGRQLEVY----HKASSLTLNIQDGPQ---------AGQSVPHVHIHIVP 93 (146)
Q Consensus 44 ~ee~~~l~~~~~~v~~~l~~~----~~~~~~ni~~n~g~~---------~gq~v~H~HiHIIP 93 (146)
+.........++.+...+.+. .+.+|-....+.|.. ....-||+|.|++=
T Consensus 104 ~~i~~Ah~~AV~~al~~lE~~a~tR~~~~G~~~~~~t~~l~~a~f~H~tSR~~DP~lHtH~vv 166 (293)
T 1omh_A 104 AEIIKAHDRAVARTLEQAEARAQARQKIQGKTRIETTGNLVIGKFRHETSRERDPQLHTHAVI 166 (293)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCEEEEEETTEEEEEECCCCCEEEEEEEECTTCCEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhhheeeccCCceEEEecCceEEEEEEecccccCCCCceeEEEE
Confidence 445555566666666666652 122343333343321 11234899999543
No 36
>1f45_B Interleukin-12 alpha chain; cytokine, cytokine-cytokine complex; HET: NAG MAN; 2.80A {Homo sapiens} SCOP: a.26.1.1 PDB: 3hmx_B*
Probab=36.36 E-value=49 Score=24.45 Aligned_cols=44 Identities=23% Similarity=0.293 Sum_probs=34.1
Q ss_pred ChhhhhhhHHHHHHHHh---hcCCCCCCCCCCHHHHHHHHHHHHhhc
Q 047991 102 NDEIYDALDVKEKELKK---KLDLDEERKDRSPEERIQEANEYRSLF 145 (146)
Q Consensus 102 ~~~~~~~l~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (146)
-..+||+|..+..+|++ ++-.||.++..=..-|....++|.|.+
T Consensus 102 L~sIyEDLk~Y~~ef~A~~~~l~~dp~~Qi~Ld~~mL~aIdeLMQal 148 (197)
T 1f45_B 102 LSSIYEDLKMYQVEFKTMNAKLLMDPKRQIFLDQNMLAVIDELMQAL 148 (197)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSTTCCCSHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHhhhhcCChhhhhhcchhHHHHHHHHHHHh
Confidence 45689999999888855 567888887666777888888887765
No 37
>2nyx_A Probable transcriptional regulatory protein, RV14; alpha/beta, structural genomics, PSI-2; 2.30A {Mycobacterium tuberculosis}
Probab=29.60 E-value=27 Score=23.85 Aligned_cols=26 Identities=8% Similarity=-0.107 Sum_probs=21.7
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHhhhh
Q 047991 39 FADLTADEICDLWLTARKVGRQLEVY 64 (146)
Q Consensus 39 ~~dL~~ee~~~l~~~~~~v~~~l~~~ 64 (146)
+..+++++...+..++.++.+.++..
T Consensus 128 ~~~l~~ee~~~l~~~L~~l~~~l~~~ 153 (168)
T 2nyx_A 128 VEQMAPAERHGLVRALTAFTEAGGEP 153 (168)
T ss_dssp HHTSCHHHHHHHHHHHHHHHHHSCC-
T ss_pred HHhCCHHHHHHHHHHHHHHHHHhcCC
Confidence 45789999999999999998888754
No 38
>2l60_A Peptide YY; GPCR ligand, hormone; NMR {Synthetic}
Probab=26.00 E-value=58 Score=17.96 Aligned_cols=19 Identities=32% Similarity=0.291 Sum_probs=15.6
Q ss_pred CCCCHHHHHHHHHHHHhhc
Q 047991 127 KDRSPEERIQEANEYRSLF 145 (146)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~ 145 (146)
...+||+|++=.+.|++.+
T Consensus 14 ~~aspEela~Y~~~Lr~Yi 32 (41)
T 2l60_A 14 KKLSPEELNRYYASLRHYL 32 (41)
T ss_dssp TTSCHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHH
Confidence 4569999999999988764
No 39
>1f8p_A Neuropeptide Y (PNPY); helix; NMR {Synthetic} SCOP: j.6.1.1 PDB: 1ron_A 1fvn_A* 1icy_A 1tz4_A 2oon_A
Probab=24.75 E-value=41 Score=18.16 Aligned_cols=21 Identities=14% Similarity=0.173 Sum_probs=14.4
Q ss_pred CCCCCCHHHHHHHHHHHHhhc
Q 047991 125 ERKDRSPEERIQEANEYRSLF 145 (146)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~ 145 (146)
.....++|||++=.+.||+.+
T Consensus 8 Pg~~a~pEela~Y~~~Lr~Yi 28 (37)
T 1f8p_A 8 PGEDAPAEDLARYYSALRHYI 28 (37)
T ss_dssp CCSSCTTTTHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHH
Confidence 345567888887777777653
No 40
>2jm6_A NOXA; apoptosis, BCL-2, helical bundle, BH3-only; NMR {Mus musculus}
Probab=23.53 E-value=22 Score=17.62 Aligned_cols=13 Identities=15% Similarity=0.312 Sum_probs=8.9
Q ss_pred HHHHHHHHHHHhh
Q 047991 132 EERIQEANEYRSL 144 (146)
Q Consensus 132 ~~~~~~~~~~~~~ 144 (146)
+++..||..+|.+
T Consensus 2 ~~l~vecaqlr~~ 14 (27)
T 2jm6_A 2 ADLKDECAQLRRI 14 (27)
T ss_dssp TTHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHH
Confidence 4667788877753
No 41
>2ns6_A Mobilization protein A; nickase, 5-strand antiparallel beta sheet, metalloenzyme, hydrolase; 2.10A {Pseudomonas aeruginosa}
Probab=22.15 E-value=1.8e+02 Score=20.88 Aligned_cols=49 Identities=31% Similarity=0.426 Sum_probs=25.8
Q ss_pred CCCCHHHHHHHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccCeEEEEEeccC
Q 047991 40 ADLTADEICDLWLTARKVGRQLEVYHKASSLTLNIQDGPQAGQSVPHVHIHIVPRK 95 (146)
Q Consensus 40 ~dL~~ee~~~l~~~~~~v~~~l~~~~~~~~~ni~~n~g~~~gq~v~H~HiHIIPR~ 95 (146)
.+|+.++..+|. +...+..-...|.. +.+.+|+. +..-||+|+=+--|.
T Consensus 80 ~EL~~eq~~~L~---~~f~~~~~~~~G~~-~d~AIH~~---~~~NpHaHim~t~R~ 128 (185)
T 2ns6_A 80 VELTLDQQKALA---SEFAQHLTGAERLP-YTLAIHAG---GGENPHCHLMISERI 128 (185)
T ss_dssp TTSCHHHHHHHH---HHHHHHHHTTTTCC-EEEEEEEE---TTTEEEEEEEECCBC
T ss_pred ccCCHHHHHHHH---HHHHHHHHHhcCCE-EEEEEEcC---CCCCceEEEEEeecc
Confidence 467777776653 44444332222322 56778862 345566666444454
No 42
>3l6t_A TRAI, mobilization protein TRAI; TRWC superfamily of relaxase enzymes, conjugative relaxase, relaxase, conjugal nickase, hydrolase; HET: CIT; 1.93A {Escherichia coli} SCOP: d.89.1.0 PDB: 3l57_A*
Probab=21.00 E-value=97 Score=24.26 Aligned_cols=51 Identities=12% Similarity=0.030 Sum_probs=25.9
Q ss_pred CHHHHHHHHHHHHHHHHHhhhhc----CCCceEEEEecCCC---------CCCccCeEEEEEec
Q 047991 43 TADEICDLWLTARKVGRQLEVYH----KASSLTLNIQDGPQ---------AGQSVPHVHIHIVP 93 (146)
Q Consensus 43 ~~ee~~~l~~~~~~v~~~l~~~~----~~~~~ni~~n~g~~---------~gq~v~H~HiHIIP 93 (146)
++......-..++.+...+.+.. +..|.+...+.|.. ....-||+|.|++=
T Consensus 105 d~~i~~Ah~~AV~~al~~lE~~a~tR~~~~G~~~~~~tg~lv~a~f~H~tSR~~DP~LHtH~vv 168 (302)
T 3l6t_A 105 DKTIIEAHEKAVAAAVREAEKLAQARTTRQGKSVTQNTNNLVVATFRHETSRALDPDLHTHAFV 168 (302)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTCEEEEEC--CEEEEECCCCCEEEEEEEECCSSSCEEEEEEEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHhheEEeCCCCceeeecCCCeEEEEEecCcCCCCCCCeeeEEEE
Confidence 34445555566666666666521 23344443333321 12234999999764
No 43
>4h31_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PE5; 1.70A {Vibrio vulnificus} PDB: 3upd_A*
Probab=20.88 E-value=88 Score=24.99 Aligned_cols=29 Identities=17% Similarity=0.156 Sum_probs=25.7
Q ss_pred cccCCCCCCCHHHHHHHHHHHHHHHHHhh
Q 047991 34 REVKRFADLTADEICDLWLTARKVGRQLE 62 (146)
Q Consensus 34 ~H~~~~~dL~~ee~~~l~~~~~~v~~~l~ 62 (146)
||+-++.|++.+|+..+...+..+.+..+
T Consensus 32 rhlLsi~dls~eei~~ll~~A~~lK~~~~ 60 (358)
T 4h31_A 32 RNFLKLLDFSTKEIQFLIDLSADLKKAKY 60 (358)
T ss_dssp CCBCCGGGSCHHHHHHHHHHHHHHHHHHH
T ss_pred CCcCchhhCCHHHHHHHHHHHHHHHHHHh
Confidence 89999999999999999999998876544
No 44
>2ef0_A Ornithine carbamoyltransferase; TTHA1199, thermus thermophil structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=20.75 E-value=1e+02 Score=24.01 Aligned_cols=28 Identities=18% Similarity=0.283 Sum_probs=25.5
Q ss_pred cccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 047991 34 REVKRFADLTADEICDLWLTARKVGRQL 61 (146)
Q Consensus 34 ~H~~~~~dL~~ee~~~l~~~~~~v~~~l 61 (146)
+|+-++.|++.+++..+...+..+.+..
T Consensus 10 rhlls~~dls~~ei~~ll~~A~~lk~~~ 37 (301)
T 2ef0_A 10 KDLLDFSGYGPKELQALLDLAEQLKRER 37 (301)
T ss_dssp SCBSSSTTCCHHHHHHHHHHHHHHHHHT
T ss_pred CCCcchhhCCHHHHHHHHHHHHHHHhcc
Confidence 8999999999999999999999987653
No 45
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=20.29 E-value=1.1e+02 Score=23.93 Aligned_cols=29 Identities=17% Similarity=0.288 Sum_probs=24.9
Q ss_pred cccCCCCCCCHHHHHHHHHHHHHHHHHhh
Q 047991 34 REVKRFADLTADEICDLWLTARKVGRQLE 62 (146)
Q Consensus 34 ~H~~~~~dL~~ee~~~l~~~~~~v~~~l~ 62 (146)
+|+-++.|++.+++..+...+..+.+..+
T Consensus 3 rhll~~~dls~~ei~~ll~~A~~lk~~~~ 31 (307)
T 3tpf_A 3 KHFLTLRDFSKEEILSLVNHASELKKEPK 31 (307)
T ss_dssp CCBSCGGGSCHHHHHHHHHHHHHHHHSCC
T ss_pred CcCCchhhCCHHHHHHHHHHHHHHHhcch
Confidence 68889999999999999999988876443
No 46
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=20.19 E-value=1.2e+02 Score=24.08 Aligned_cols=28 Identities=18% Similarity=0.186 Sum_probs=25.3
Q ss_pred cccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 047991 34 REVKRFADLTADEICDLWLTARKVGRQL 61 (146)
Q Consensus 34 ~H~~~~~dL~~ee~~~l~~~~~~v~~~l 61 (146)
||+-++.|++.+++..|...+..+.+..
T Consensus 7 rh~Ls~~dls~~ei~~ll~~A~~lk~~~ 34 (335)
T 1dxh_A 7 RNLLSLMHHSTRELRYLLDLSRDLKRAK 34 (335)
T ss_dssp CCBSSSTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCchHhCCHHHHHHHHHHHHHHHhhh
Confidence 8999999999999999999999987654
Done!